LOCUS       DAPWAA010000001        87684 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.001, whole genome shotgun sequence.
ACCESSION   DAPWAA010000001 DAPWAA010000000
VERSION     DAPWAA010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 87684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 87684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..87684
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.001"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..1118
                     /locus_tag="RTF91_000001"
     CDS             <1..1118
                     /locus_tag="RTF91_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2318 domain-containing protein"
                     /protein_id="HDZ4942956.1"
                     /translation="CIALHYYFLSQDFPIFTSSLIDSEGISSLGFITLALLVCILIFF
                     FLKWQKNFNQKTSFILFLLLVFIESDKALANILLTLMRNSIIETHAFLVSFVGKSNYF
                     GIFGIYVYLFFITVLAFLSLKIRKKNITKKQILDISYRKNEAKTSLINRYFSSVFISC
                     VVSFCIILYFFMVSSKPLTIDEPKEILPDSNGKFIFDITLLRDNKLHRFAYISAEGKV
                     IRFFLINKREDKDSPVAVFDACMICGDMGYIKKDGQLICISCNVRIFLPSVGKSGGCN
                     PIPLKYEYDGKKITIDVKDVIAGSNYFSQIKEIEVEDPVSKTKVINTQAPFSYSYKGI
                     TYYFSNQKNYEEFKKDPMKYVEENEALFLIQRRNDVC"
     gene            1105..2397
                     /locus_tag="RTF91_000002"
     CDS             1105..2397
                     /locus_tag="RTF91_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ4942957.1"
                     /translation="MMFAKMIFNSIFKNKIQKFLAFLTCFLAILLLSTMLNITLSIGD
                     EVTKQLKSYGSNILVLPKGSSLSIEIGNELYEPLKNKNYLEEKNLYMIKDIYWRNNIT
                     ALAPFLEGKITIENSQQKVLLYGTYFQKAIKIKDDDDFITGIKSLYPYLAAQGEWAKD
                     DSDEIMLGEDFAKNNKLKIGDTIKLIGENNQSKEVKIVGILLHANPKMSNKIIAPLNL
                     AQNLLNKQGLYSSAEVRAFTIPESTLSEKVRRMGEEKLDQLEYDKWYCSAYVGSIASQ
                     ISDGLPGADAKILNSISDAQSLVVKKIQSLMGITCIICLIVASIAISSLMSSEIHRRK
                     KEIGLLKVLGANTFQIYLIFASENLIVALFAALFGFIFGTALSQIISLSIFGYFIDIA
                     FIALPLSFIFAGLIALLGCLLPIKNITQLSAAGVLYGR"
     gene            2387..3505
                     /locus_tag="RTF91_000003"
     CDS             2387..3505
                     /locus_tag="RTF91_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ4942958.1"
                     /translation="MVDKFFLNELFKSISFSYQRLFIIVLSVFIGALTCSAFLNIYFD
                     IDTKLSKELKAYGANVMISPKQDENFISDTDYEKIKENLKARALTPFLYDFLNLGSTS
                     GVVLGTDFRALKVTKPFLEVKEGSFSLNDFDENSVFLGVNLAKQLGLKTGNELQIYNP
                     NNGKSVKLIIKGILSSNDEFDSIALAPLNVVQNLSDKAGINYANAVVYGNFDEVKTKT
                     KAISNEIINAKPISSVSLSEGLVLGKIKALMFLIILIVLIIVTTSVNTTLSSIIFSRK
                     KEIALRLALGAKKSEILKLFASECFIVSFFASLIGAFCGIFLANIFGYLIFNSSIDFR
                     FIAVFIALIISLIFAFLAAFFPIKKALKINVCENLKGE"
     gene            3502..4155
                     /locus_tag="RTF91_000004"
     CDS             3502..4155
                     /locus_tag="RTF91_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4942959.1"
                     /translation="MMKKELIKISNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSG
                     KSTLLNILSLMDTPSSGEYLLDSENLEQMDEEQKITLRREKIGLIFQQFHLIPYLNAL
                     ENVMLSQYYHSSVDEEDAKIVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPEL
                     LLADEPTGNLDEANEKIVLQTLQKLKNEGKTIVLITHNPDLAKFADRTLILQHGVLK"
     gene            4152..4640
                     /locus_tag="RTF91_000005"
     CDS             4152..4640
                     /locus_tag="RTF91_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDZ4942960.1"
                     /translation="MKKSFLILCVLFLLNACSFENSKDTGKIGEKSVEISAKDTLGKA
                     VKLSDDNTSLKVLVFFQNGCPSCLKELPSLDEFVQNHPNKISVYAINSIDNANVVKVL
                     AEQFDFKNIKVLKDDLKITNDRYAVFATPTTIIIKDGMIKDRILGEKPWEFFESKLIS
                     LL"
     gene            4601..5104
                     /gene="traF"
                     /locus_tag="RTF91_000006"
     CDS             4601..5104
                     /gene="traF"
                     /locus_tag="RTF91_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HDZ4942961.1"
                     /translation="MGIFRVQTYFFALIIALSFIACDSGETFKALNSNKTYNFAYNGF
                     EKSLKLNNEAQNFALVFFTKDCGVCKEQIPILQNLAKNYDFNIFVVLGDANDANDAQA
                     WANEKGLSNLAMFYEKRAAKYLSSAIGDIYGVPVLSFFKEGKMDEKFIGLTPYSILEK
                     EIKKVKS"
     gene            complement(5121..5558)
                     /locus_tag="RTF91_000007"
     CDS             complement(5121..5558)
                     /locus_tag="RTF91_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HDZ4942962.1"
                     /translation="MKKSILILTIFLAAAQAKEIQIYESPACGCCDLWADYMKAKGYK
                     VSIHKTNDFLKIKEKLSIKDEYQSCHTGVIEGYAIEGHIPESAVAWLLENKPKDVIGI
                     SAPRMPQGSPGMEQGYNEKYPVILMKKDGNYELYGYFIGDKKL"
     gene            complement(6037..6121)
                     /locus_tag="RTF91_000008"
     tRNA            complement(6037..6121)
                     /locus_tag="RTF91_000008"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6085..6087),aa:Leu,seq:tag)
     gene            complement(6127..6203)
                     /locus_tag="RTF91_000009"
     tRNA            complement(6127..6203)
                     /locus_tag="RTF91_000009"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6167..6169),aa:Arg,seq:tct)
     gene            complement(6218..6294)
                     /locus_tag="RTF91_000010"
     tRNA            complement(6218..6294)
                     /locus_tag="RTF91_000010"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6258..6260),aa:Arg,seq:tcg)
     gene            complement(6301..6377)
                     /locus_tag="RTF91_000011"
     tRNA            complement(6301..6377)
                     /locus_tag="RTF91_000011"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6341..6343),aa:His,seq:gtg)
     gene            complement(6402..6479)
                     /locus_tag="RTF91_000012"
     tRNA            complement(6402..6479)
                     /locus_tag="RTF91_000012"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6442..6444),aa:Pro,seq:tgg)
     gene            complement(6515..7363)
                     /locus_tag="RTF91_000013"
     CDS             complement(6515..7363)
                     /locus_tag="RTF91_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HDZ4942963.1"
                     /translation="MRFIFLICCVCLAFADEILLVSKFNKQDFNSKDFNAYLMSEKLD
                     GVRGIWDGKYLKTRQNYKIKTPDFFTKNFPPFAIDGELWIARNKFDEISALIRSGNSN
                     LALWKEVTYNIFDVPNACEEFRLSSCSLKNRLAVLEEYLQKYPNAYIKIIPQIPVENQ
                     NNLNQFYENIIKNQGEGIVIRKNLSPYEKGRSKNAMKLKPYDDAECELVGFSKGKGKF
                     ENQVGALLCKMPNGKIIKIGSGLKDKDRKNPPKIGSIVTYKFNGSTKNSLPRFPVFLR
                     IRDENP"
     gene            complement(7363..8025)
                     /gene="cgpA"
                     /locus_tag="RTF91_000014"
     CDS             complement(7363..8025)
                     /gene="cgpA"
                     /locus_tag="RTF91_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoprotein CgpA"
                     /protein_id="HDZ4942964.1"
                     /translation="MKTKILAIFFIFTSLLYADENPFKTDQNITLIVPPEFQKEEVKF
                     NSSARILKSITFNYINLDGSEDKIDLDINKSIDWHDIYTISRFKSPDPSKVLDVSVTI
                     PEKNSSKQESNSTANVEIPLQVAKIYDFISYAVYKNKIKLNTSDEMITDFSVGNPSKI
                     VIDFRSNLISPTKNIRLSNSIFKRIDFGSHKGYYRLVIYLDGIYNYNIQKDGTGYMIN
                     LL"
     gene            complement(8015..8218)
                     /locus_tag="RTF91_000015"
     CDS             complement(8015..8218)
                     /locus_tag="RTF91_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4942965.1"
                     /translation="MVFWAFLVVIGAIYFGNMFFGQYSLDTLLSLENTKEELNKKIIL
                     LKEQNAKAQKDYFELKGLYPNEN"
     gene            complement(8284..9528)
                     /gene="eno"
                     /locus_tag="RTF91_000016"
     CDS             complement(8284..9528)
                     /gene="eno"
                     /locus_tag="RTF91_000016"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDZ4942966.1"
                     /translation="MLVIEDIRAYEVLDSRGNPTVKAEVTLSDGSMGAAIVPSGASTG
                     SKEALELRDNDERFGGKGVLKAVCNVNETIADEILGLDAFNQTQLDDTLRELDGTNNY
                     LNLGANATLGVSMATARAAATALGMPLYRYLGGANASILPVPMCNIINGGAHANNNVD
                     FQEFMIMPFGFTSFKEALRSVCEIYAILKKELASSGHSTALGDEGGFAPNLANNTEPI
                     DLLMTCIKKAGYENRVKIALDVASTEFFKEGKYHMEGKAFSSEDLIERYVELCAKYPI
                     CSIEDGLAENDFKGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPN
                     QIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNTGQIKTGALARGER
                     TAKYNRLLEIELESDEYLGEKL"
     gene            complement(9528..10556)
                     /gene="recA"
                     /locus_tag="RTF91_000017"
     CDS             complement(9528..10556)
                     /gene="recA"
                     /locus_tag="RTF91_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDZ4942967.1"
                     /translation="MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSV
                     GLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKY
                     AKNLGVNTDDLYVSQPDFGEQALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGD
                     QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFY
                     ASVRLDVRKVATLKQNEEPIGNRVKVKVVKNKVAPPFKQAEFDVMFGEGLSREGELID
                     YGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENAEIADEITKAIQDSMGIEGMIS
                     GSEDDEGE"
     gene            10666..11526
                     /locus_tag="RTF91_000018"
     CDS             10666..11526
                     /locus_tag="RTF91_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis family protein"
                     /protein_id="HDZ4942968.1"
                     /translation="MKKITIAHSPDADDIFMYMAIKFGWIGNDFAYENTALDIQTLNE
                     FALKNEFDATAISFGLYPLITSEYALLRTAVSFGEGYGPKLIKKKDTHLKRNFKVALS
                     GANTTNALIFRMKYPEARIVYKNFLEIEKAVLSGEVDAGVLIHESILEFDQSLCVEAE
                     LWDIWLEFAKKNLPLPLGGMALRRSLPLSDAIKIERDLTKAVKTADANRKILAPMLME
                     RKLIRVNEEKLDTYLNLYANKNSINMNQTQLLAVDTLFKLGYDYKFYDKIIHVNDYLI
                     PSEYEEARNS"
     gene            11538..11807
                     /gene="fliQ"
                     /locus_tag="RTF91_000019"
     CDS             11538..11807
                     /gene="fliQ"
                     /locus_tag="RTF91_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HDZ4942969.1"
                     /translation="MDESTLVALGVQTFKITLLLSLPMLLAGLIAGLLISIFQATTQI
                     NEMTLSFVPKIILVVIILIFLMPWMTATMIDFTENILNQIPTFIK"
     gene            11804..12580
                     /locus_tag="RTF91_000020"
     CDS             11804..12580
                     /locus_tag="RTF91_000020"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDZ4942970.1"
                     /translation="MIIDFKKYSSVRIGNEFEVLILDQICDFDGFLVGGANNLLVSPK
                     PKNIGILGDNFDFIQILDQNKDFIHLRIGCKTKSSKMYRFAKENNLNGFEYLSKIPGT
                     LGGLLKMNAGLKGECISQNLLKIATSKGEILKENINFDYRFCPLNMPFFWAEFKLNFG
                     FDTFKDEAFKNARRNQPSGASFGSIFKNPKSDFAGRLIEAVGLKGFSKGDAMLSDKHA
                     NFLTNKKNASFEDAFFLIELARKKVFEEFGISLENEVIII"
     gene            complement(12603..13367)
                     /locus_tag="RTF91_000021"
     CDS             complement(12603..13367)
                     /locus_tag="RTF91_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4942971.1"
                     /translation="MRYCFTLFLSLFLSSNLLANNFSQKKIIKIEKSADNFEVIDLNQ
                     NVVNPNLNQQKALFDSSALIEKKSQIGKDKDIDFAIVLTFRKNFGYVLDNFRVSDKEF
                     STLFAKNLIQSLKLNLVNSAANGIYQSPKTLSYFSPKDAKLINVSPFLRQEKDKAKMY
                     AKFTDYVVVVNLQDFYINITNYFITTSKKGVANINFKIISTSNGEILAAKNAELNFTL
                     KTQDAKQNYQDIVNQMPKMLSDVIDNEIKKLKLAIN"
     gene            complement(13413..14177)
                     /locus_tag="RTF91_000022"
     CDS             complement(13413..14177)
                     /locus_tag="RTF91_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDZ4942972.1"
                     /translation="MLNLDKFLQIAINASNKASKAILKERGNFKTWEKEDKSSLTSAD
                     LASNKILDDILGSTDIKILSEEKLLNKEECKELKTFWLIDPLDGTSGFLKGSDEFCVM
                     ISLIHDNRPVLSLIQNPSKGDIFYAHAKTKVYKNDKILQIDQQEYEKNKYKALLSVNH
                     LSKEDENFTKEHQLEAINIGSGLKFCAILEAKAGVYKRFEKLNIWDIVAGDFLVNQNG
                     GFMGDFSKKYILYHPLNYRSSSFICVSSKEFLQDFL"
     gene            complement(14261..15529)
                     /locus_tag="RTF91_000023"
     CDS             complement(14261..15529)
                     /locus_tag="RTF91_000023"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDZ4942973.1"
                     /translation="MSNSVTIIDNRNGKSYEFPIYDGKTGPSVVDMSSFYKQTGMFSY
                     DEGLTSTATCKSKITYIDGENGILMHRGYPIEWLAENKLYLDVVHLLLYKELPDAMRL
                     EAFRYEMKKRSFIHEGMHRLFDSFPDNAHPMAVLQGAVSSLSAFYPDHLNMNVKEEYM
                     EMAARVVAKIPTIVATAYRYKHGFPMAYPNLDRGFTENFLYMLRTYPYNHVELKPIEV
                     KALDTVFMLHADHEQNASTSTVRAVGSTHAHPYACIAAGIGALWGHAHGGANEGVIRM
                     LEQIGSIDRVDEFIKRAKDKNDPFRLMGFGHRVYKNFDPRAKVLKKLRDQLIDELDID
                     TSLIKVATRIEEIALSDDYFVQRGLYPNVDFHSGLILKALGIPNEMFATLFVIGRTPG
                     WIAQWIEQKEQESLKIVRPRQLYLGETSKI"
     gene            complement(15644..16819)
                     /locus_tag="RTF91_000024"
     CDS             complement(15644..16819)
                     /locus_tag="RTF91_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDZ4942974.1"
                     /translation="MHQSVIDSQGLIDLKILIVIALCLLFSPHIAKILRLPLSATEII
                     LGAVIAYFGFIGKSENFALLANVGFYYLMFIAGMEVNLRAFFNMDKEIAKKSFFYIFL
                     LYALSSFIVWIFGLSLVFVIIIPVMSVGLLSLLFKDFGKECYWLNIAMIVATLAEVTS
                     IVLLTIAGAFLREGTGIIDVAESILYLNIFLGLCLLGFKMLGVLFWWYPQLKVVLMPW
                     EDKNEKDIRFCMAIFILIIVAMVITKLEIVLGSFIAGSFIATFFDHKKDLEHKLSTFG
                     HGFLIPIFFIHIGSTFDLKMILDYEIVLQAFLLMFVMVGLRILCASVFLKKIGFKNMI
                     LFGLSHSIPLTLLIATATLGYSGKVIDEKLYSALILTALFEAIIVMSMIKFLSNSKK"
     gene            complement(16800..17636)
                     /locus_tag="RTF91_000025"
     CDS             complement(16800..17636)
                     /locus_tag="RTF91_000025"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase"
                     /protein_id="HDZ4942975.1"
                     /translation="MQIMLCAISNIASGNCSEDCKYCTQSAHVKTDIQKYRRKEISQI
                     VLEAKIAKKNEALGFCLVTAGLGLDDEKLEYVCEAAKAVQKEVPNLLLIACNGMASVD
                     QLKELKKAGIFSYNHNLETSKEFFPQICTTHTWESRFQTNLNAKEAGLMLCCGGIYGM
                     GESEEDRLSFRKSLQQLQPFSTPINFFIANENLKLQVPRLSADEALKIVRDTKEALPQ
                     SVVMIAGGREVVLQERQYEIFQAGAGAIVIGDYLTTKGEEPSQDIVKLKEMGFTFASE
                     CY"
     gene            complement(17638..19728)
                     /gene="topA"
                     /locus_tag="RTF91_000026"
     CDS             complement(17638..19728)
                     /gene="topA"
                     /locus_tag="RTF91_000026"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDZ4942976.1"
                     /translation="MKKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGI
                     KIEDDGFVPEYRITSDHSALVKELKNKAKDAKEVYLATDEDREGEAIAYHIAKAIGKD
                     ENTLPRIVFHEITKSAIENALKNPRKLDIHSVNAQQTRRLLDRIVGYKLSPLLGQKIQ
                     RGLSAGRVQSAALKIIVDREKEIQAFIPLEYFSIDMIFQKDLDAELIEFDKAKIEKLT
                     ITNKDRAKLILEACKNETYNITDIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTM
                     ILAQKLYEGVNTHEGVMGVITYMRTDSLNLAKEAIENARKFIQINFGKDYLPSKANVY
                     TTKAKGAQEAHEAIRPTNLNFTPEIAAKFLDKDELKLYALIYNRFLACQINPAISQTQ
                     NVFVKNDRAVFKISGRKILFDGYYKVYGDMDKDKILPHLKIGESLKVQNLEMNSCFTE
                     PPSRYSEAGLVKKLESLGIGRPSTYAPTISILTSRDYVKIDKKQLIPSEVAFNVTEVL
                     EKNFCDIVDSKFTSNLENTLDEIAEDKADWQETLKEFYYPFMRKIEEGKTKIASQKTV
                     TKLGESCPDCGGELAIRKGRFGEFVACLNFPKCKYSRNLKNESKNTSVKTKVNSTGIA
                     CPSCQKGEIVERFSKRGKFYGCSAYPKCNFISKYKPSDEKCEECGETLVIKELKKGTF
                     LECLKCKIKKELKD"
     gene            19926..21197
                     /locus_tag="RTF91_000027"
     CDS             19926..21197
                     /locus_tag="RTF91_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ4942977.1"
                     /translation="MNGKTYKFHPNDTKMDKKIIQITEKFGFKVAVFSMAAMTMLGSV
                     VISSALPAINRHFEELLTQSGATLSSSFTLTHLDILTRLVLTIPAIFVVILSPFAGIL
                     MDKFGKLKFILPAMIVWTISGVSGFFLNDIYDILTSRAIFGMATAFIMTGASALLGDY
                     YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAII
                     YLFEPRKFKFDNHIKIEAKTNYWQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDP
                     KYIGISMSISALCYGFFSLGYKYIIKFLSIKIIYVLTLFIVSCSFLLLFLVDNFFAVL
                     MALALLGMGGGIMLVNNTAYLFSICPENARARACGILASCIFLGQFLSPIISQPIVRQ
                     IGLVDAFLIWAIVIFIVCIVFLFLKQKTRVN"
     gene            complement(21388..22653)
                     /gene="secY"
                     /locus_tag="RTF91_000028"
     CDS             complement(21388..22653)
                     /gene="secY"
                     /locus_tag="RTF91_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDZ4942978.1"
                     /translation="MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQN
                     NALGLFNVFSGGAAERFSIISLGIMPYITASIIMELLAATFPNIGKMKKERDSMQKYM
                     QIIRYATIAITLVQSIGVAIGLQSLHSRGGAGAIMIEDLNMFITLCAISMLAGTMLLM
                     WLGEQITQKGVGNGISLIIFAGIVSEIPRAISGTVGQINSGEMNFLTAFAIFALILIT
                     IGVIIYVELGERRIPISYSRKVVMENQNKRIMNYIPIKLNLSGVIPPIFASAILMFPT
                     TILQTSTNPYFQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIVFNAKDIAENLKKQG
                     GFIPGIRPGEGTSNYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFHFGGTSVLI
                     VVQVALDTMRKIEAQLYMSKYQTLSAVGL"
     gene            complement(22653..23045)
                     /locus_tag="RTF91_000029"
     CDS             complement(22653..23045)
                     /locus_tag="RTF91_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDZ4942979.1"
                     /translation="MNLTKAAGSTHKTKRIGRGQGSGMGKTATKGGKGQTARKGYNEK
                     RGFEGGQQPLQRRLPKVGFASKIQKPYVINVEKITAVKELSEITLESIKSVHKISKSV
                     NKIKLIGVSAKGLVSKIKDENISVTGSK"
     gene            complement(23050..23493)
                     /gene="rpsE"
                     /locus_tag="RTF91_000030"
     CDS             complement(23050..23493)
                     /gene="rpsE"
                     /locus_tag="RTF91_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDZ4942980.1"
                     /translation="MEKYNREEFEEVIVDIGRVTKVVKGGRRFRFTALVIVGNRKGLV
                     GVGYGKAKEVPDAIRKAVDDAFKNIVEVKTKGSTIAHDVEVKYNASRILLKPASEGTG
                     VIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLKG"
     gene            complement(23505..23861)
                     /locus_tag="RTF91_000031"
     CDS             complement(23505..23861)
                     /locus_tag="RTF91_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDZ4942981.1"
                     /translation="MRANVLKRKLTLRIKRKKRIRAKISGCENFPRISVFKSNRTLYI
                     QAIDDVKAVTLAAVDGRKLGVKANKEGAKKIAAEFAKTLKAKKIEQAVFDRNGYVYHG
                     VIAALAESLRENGIRL"
     gene            complement(23871..24407)
                     /gene="rplF"
                     /locus_tag="RTF91_000032"
     CDS             complement(23871..24407)
                     /gene="rplF"
                     /locus_tag="RTF91_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDZ4942982.1"
                     /translation="MSRIGKQPIAIPSGVEVKLEGNLLKFKKGNLAKELDTKANVNIE
                     IKDNNILFSPKGEDRQSRAYWGTYRALAYNIVVGLTQGFSKTLEINGVGYKAALKGKV
                     LELSLGFSHPINYDIPEGIEIVVDKNTIAVKGSDKQVVGQVAAQIREFRPPEPYKGKG
                     VKYSDERIIRKAGKTSKK"
     gene            complement(24485..24880)
                     /gene="rpsH"
                     /locus_tag="RTF91_000033"
     CDS             complement(24485..24880)
                     /gene="rpsH"
                     /locus_tag="RTF91_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDZ4942983.1"
                     /translation="MINDIISDSLTRIRNAGMRKLETTKLLHSKVVEALVGIFQAKGY
                     IESFNVIEEDKKKFINVVLKYDEKGKSVINELKRISKPGRRVYKGKDEIKRFKNGYGT
                     IVVSTSHGVLANDEAYKAGVGGEILCTIW"
     gene            complement(24890..25075)
                     /locus_tag="RTF91_000034"
     CDS             complement(24890..25075)
                     /locus_tag="RTF91_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003948630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HDZ4942984.1"
                     /translation="MAKKSMIAKAARKPKFKVRGYTRCQICGRPHSVYRDFGICRVCL
                     RKMGNEGLIPGLKKASW"
     gene            complement(25077..25622)
                     /gene="rplE"
                     /locus_tag="RTF91_000035"
     CDS             complement(25077..25622)
                     /gene="rplE"
                     /locus_tag="RTF91_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDZ4942985.1"
                     /translation="MMRLKEKYNQSIKPALVKEFDIKNPMLIPVIEKVVISVGAGELA
                     KDQKVLQNVADTISLVAGQKAVITKAKKSVAGFKVREGFPVGVMVTLRKENMYAFLDK
                     LISIALPRVKDFRGLNRDGFDGRGNYNFGLDEQLMFPEVEYDKILRTHGMNISIVTTA
                     QNDKQAQKLLELIGVPFTKGK"
     gene            complement(25626..25859)
                     /locus_tag="RTF91_000036"
     CDS             complement(25626..25859)
                     /locus_tag="RTF91_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDZ4942986.1"
                     /translation="MAVKLKIKKGDSVKIITGDDKGKIGKVLAVYPKTLKVVVQGCKI
                     SKKAIKPSEKNPNGGFINKEMPMDISNVAKVQE"
     gene            complement(25859..26227)
                     /gene="rplN"
                     /locus_tag="RTF91_000037"
     CDS             complement(25859..26227)
                     /gene="rplN"
                     /locus_tag="RTF91_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015106543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDZ4942987.1"
                     /translation="MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVK
                     KALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPV
                     GREVRYGGFMKIVSLAPEVL"
     gene            complement(26227..26478)
                     /gene="rpsQ"
                     /locus_tag="RTF91_000038"
     CDS             complement(26227..26478)
                     /gene="rpsQ"
                     /locus_tag="RTF91_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDZ4942988.1"
                     /translation="MAFKREIQGVVVKIAGEKTASVLVERKVVHPRYRKIVKRFKKYL
                     IHDERNEVKVGDTVVAVECRPLSKRKSFRLKSVLATGVE"
     gene            complement(26488..26673)
                     /gene="rpmC"
                     /locus_tag="RTF91_000039"
     CDS             complement(26488..26673)
                     /gene="rpmC"
                     /locus_tag="RTF91_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDZ4942989.1"
                     /translation="MKYTEIKDKTAAELATMLKEKKVLLFTLKQKLKTMQLTNPKEIS
                     QVKKDIARISTAINALR"
     gene            complement(26660..27085)
                     /gene="rplP"
                     /locus_tag="RTF91_000040"
     CDS             complement(26660..27085)
                     /gene="rplP"
                     /locus_tag="RTF91_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDZ4942990.1"
                     /translation="MLIPKRTKYRKMMKGRNRGYANRGTEFTFGEFALKATEAGRINS
                     RQIEAARIALTRFVKRQGKTWIRVFPDKPLTKKPLETRMGKGKGAVEEWVMNIKPGRI
                     IYEMAGVSEEMARQALTLAMHKLPFKTKFVTRESQNEIY"
     gene            complement(27088..27789)
                     /gene="rpsC"
                     /locus_tag="RTF91_000041"
     CDS             complement(27088..27789)
                     /gene="rpsC"
                     /locus_tag="RTF91_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDZ4942991.1"
                     /translation="MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLK
                     RKLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLISKDVNIN
                     IKEERKAGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGA
                     EMARTEWYLEGRVPLHTLRAKIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTE
                     ESTPAKKPRRTRRGK"
     gene            complement(27789..28199)
                     /gene="rplV"
                     /locus_tag="RTF91_000042"
     CDS             complement(27789..28199)
                     /gene="rplV"
                     /locus_tag="RTF91_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDZ4942992.1"
                     /translation="MSKALIKFIRLSPTKARLIAREVQGMNAELAMASLKFMPNKGAK
                     YIANAISSAVANGGFEANEVIVKSCRVDAAAVLKRFRPRARGSASRIRKPTSHILVEV
                     AKAEVKAEEKKTVAKKAPVKKITSTKKATAKKES"
     gene            complement(28210..28491)
                     /gene="rpsS"
                     /locus_tag="RTF91_000043"
     CDS             complement(28210..28491)
                     /gene="rpsS"
                     /locus_tag="RTF91_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDZ4942993.1"
                     /translation="MARSLKKGPFVDDHVMKKVIAAKKANDNKPIKTWSRRSTITPDM
                     IGLTFNVHNGKSFIPVYITENHIGYKLGEFAPTRTFKGHKGSVQKKIGK"
     gene            complement(28493..29323)
                     /gene="rplB"
                     /locus_tag="RTF91_000044"
     CDS             complement(28493..29323)
                     /gene="rplB"
                     /locus_tag="RTF91_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDZ4942994.1"
                     /translation="MAIKTYKPYTPSRRYITGLSSEDITAKPSVRSLLVKLPAHAGRN
                     SYGRITSRHKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALITYKDGEKR
                     YILQPRGLSVGDIVAAAEGGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMIRSAG
                     AYAQLMGKEEKYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRHRGIR
                     PQTRGSAMNPVDHPHGGGEGKKNSGRHPVTPWGKPTKGAKTRRKKASDKLIISRRKGK
                     "
     gene            complement(29325..29606)
                     /locus_tag="RTF91_000045"
     CDS             complement(29325..29606)
                     /locus_tag="RTF91_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDZ4942995.1"
                     /translation="MADITDIKTILYTEKSLNLQEQGVVVIQTSPKMTKTGLKAVLKE
                     YFGVTPKSINSLRMDGKVKRFRGRLGQRNDYKKFYVKLPEGVSLENTEA"
     gene            complement(29609..30223)
                     /gene="rplD"
                     /locus_tag="RTF91_000046"
     CDS             complement(29609..30223)
                     /gene="rplD"
                     /locus_tag="RTF91_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDZ4942996.1"
                     /translation="MSKVVVLNDKLEKAGELDLPSKYAEVNPHNLYLYVKSCLASLRA
                     NTAHTKGRSDVSGGGKKPWRQKGRGGARAGSTRTNVWVGGAVAFGPTNERNYFQKVNK
                     KQKRLALERALADKGVKGALFTADSLAIESGKTKDANAVIKKLGIKDALIVKDLLDEK
                     TLLAYRNLANCYVVDVTEVNAYLVSVFNAVIMEKSALESITKEG"
     gene            complement(30220..30795)
                     /locus_tag="RTF91_000047"
     CDS             complement(30220..30795)
                     /locus_tag="RTF91_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDZ4942997.1"
                     /translation="MEYIVEKIGMSRTITNPSIAVTLLRIVNVKVCEVEGGKALVAYP
                     KGKASNKCVAGQQKKYNLSAEYNRFATLEVVNTEVGDLDETPLNEAKILKVSFNTKGR
                     GYSGVMKRHNFSGGPASHGSRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKNE
                     VVSYDAENKILVVKGAVPGYNGAMGKIRIAK"
     gene            complement(30805..31116)
                     /gene="rpsJ"
                     /locus_tag="RTF91_000048"
     CDS             complement(30805..31116)
                     /gene="rpsJ"
                     /locus_tag="RTF91_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDZ4942998.1"
                     /translation="MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKI
                     KRYTVLKSPHINKDSREQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEVRAMG
                     K"
     gene            complement(31325..32086)
                     /locus_tag="RTF91_000049"
     CDS             complement(31325..32086)
                     /locus_tag="RTF91_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDZ4942999.1"
                     /translation="MRINKFVSHNTRYSRREADELIKQGLVKINNKIALLSDEVKFDD
                     KIFIKGKRVQKKTQFSVIIYHKQKGEIVSKKDDRGRKTIYDTLPKQFSTWLSVGRLDY
                     ASEGLLLLTDSPVIADALMHSDLEREYYLKVKGIVTKQVIEAMQNGLEIKNEKKGAHA
                     KTKITSMSFAPFIGFEIFGSSGGYTKLRVIINEGKNRELRRFFGHFDVEVMDLKRVAF
                     GVLDLGMLKPGKHRYLENGEYEKLRDFLKFNEIRY"
     gene            complement(32123..34117)
                     /locus_tag="RTF91_000050"
     CDS             complement(32123..34117)
                     /locus_tag="RTF91_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HDZ4943000.1"
                     /translation="MNMDENKEINNNEQNPNSNSKNNKRYKYKNRIKKLVNSLQNENN
                     TATSNQNSNKENAQNPENKTEKKKKKNRNLPLKLTGNEDWQIALAECIEANRVSHENR
                     LHPLKYNNSSEHKIRITPLGGLGEIGGNISVFETNKDAIIVDIGMSFPDGTMHGVDII
                     IPDFDYVRKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEH
                     GLKAERKWFRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKID
                     QTPIDGYPTDLGRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGR
                     VIMSTFSSNIHRVYQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDAD
                     EVSKYKDNEVLIVTTGSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASV
                     SAVLDYLLKAGAKVAYQEFSEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKH
                     KETAMKCGIPERNIYLMSDGDQVELCQKYVKRVKTVKTGKVFVDNQINKQIADDVVID
                     RQKLADSGIVVIIAQIDKATKTLINKPRVFSYGLVADKHDHAFSKDMAEVLGQFFINV
                     KDEVLNDPRFLENQIRQVLRKHIFRKIKKYPTIVPTIFVM"
     gene            complement(34089..34886)
                     /gene="rsmA"
                     /locus_tag="RTF91_000051"
     CDS             complement(34089..34886)
                     /gene="rsmA"
                     /locus_tag="RTF91_000051"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDZ4943001.1"
                     /translation="MVKAKKQYGQNFLIDKSVLAKIIQAIPKEMDNIIEIGPGLGDLT
                     QDLLKISQVKAYEIDNDLIPILKKKFQKELECGKFNLIHQNASEAFSPSLDEKPYFLV
                     ANLPYYVASHIILKALEDKNCLGLIVMVQKEMAEKFCAKEGNSEFSSLGILSAMICER
                     KILFDVNPQCFNPPPKVMSTVISLIKIKDFDELCEIENFKNFLKDCFKAPRKQLLGNL
                     KTHKAKVLEVLSILGLKENIRPHEICVDSYLKIYDKLKDEYGRKQRN"
     gene            34966..35502
                     /locus_tag="RTF91_000052"
     CDS             34966..35502
                     /locus_tag="RTF91_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDZ4943002.1"
                     /translation="MIVCAGGNENFSFAKAIGIGLVESAFHLSQLCLKEKPSKLIFIG
                     TCGLYDKGEILEIYKSSHAFNIEFSKISYAFYTPAKDEICLEKENVSRETIKINSSNY
                     ICQNSKAAKEFAKLGFFAENMEAFSVLSVAKNFGIYAECILCATNFCNENAHEDFIKN
                     HQKAKEKLEEYLKKYHYI"
     gene            35524..36594
                     /gene="rlmN"
                     /locus_tag="RTF91_000053"
     CDS             35524..36594
                     /gene="rlmN"
                     /locus_tag="RTF91_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HDZ4943003.1"
                     /translation="MKELVNILDFLPEELGEKIKPMFRVKQIYQWIYQKYANNFSDMS
                     SLPKDLRLELAQNFHFSPVKCVKNEQSKDRSIKYLFELIDGLRVESVLLPMKEEKIDE
                     KGKRISHARYTICVSSQVGCKSSCSFCLTAKGGLKRNLSAGEIVGQILWIKKQNNIPY
                     ERRVNIVYMGMGEPLDNLKNVSKAVKILAQNDGLAISPRRQTISTSGLAKQIKELGQM
                     NLGILLAISLHAVNDELRTELMPINKAYNIAAIMDAVREFPIVQRKRVMFEYLLIDGI
                     NDKLEHAKELVKLLNGIKAKVNLILFNPHEGSIYKRPSLENAIKFQDLLSSKGVTCTI
                     RESKGLDISAACGQLKERVKEQ"
     gene            36591..36689
                     /locus_tag="RTF91_000054"
     CDS             36591..36689
                     /locus_tag="RTF91_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943004.1"
                     /translation="MTMLDIFEIIFITAVVVIGFGGIVFVLMKEKK"
     gene            complement(36702..36778)
                     /locus_tag="RTF91_000055"
     tRNA            complement(36702..36778)
                     /locus_tag="RTF91_000055"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36742..36744),aa:Met,seq:cat)
     gene            36909..36996
                     /locus_tag="RTF91_000056"
     tRNA            36909..36996
                     /locus_tag="RTF91_000056"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:36943..36945,aa:Ser,seq:gga)
     gene            37111..38067
                     /locus_tag="RTF91_000057"
     CDS             37111..38067
                     /locus_tag="RTF91_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002932162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HDZ4943005.1"
                     /translation="MLQSRLLMNLKGIGISFIPRYFFQINLDKIFNDILKYNIKDLEE
                     IQTRVKYYNKINEFFTPTEKEKIGKFPFKDTSYAFDAYEISKYFKDEFLWNKEFGDIR
                     HTFKEATICKSRSLENNINNILLKLDKNRHFCFLKDNINYENKKDIAIFRGAVYQKHR
                     KEFFDSYFGKTFCDIGDTSKQPSQWKKNFLNKKEQMKYKFIISLEGNDVASNLKWAMN
                     SNSLVLVPKITCETWFMEGTLKPNYHFAFIDNENLPTVIEYFKAHPKDALEIINNAHQ
                     YIKKFLDKKKEFHIGILVLTKYFYYSKQLELSKKRDILELIK"
     gene            38204..38279
                     /locus_tag="RTF91_000058"
     tRNA            38204..38279
                     /locus_tag="RTF91_000058"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:38237..38239,aa:Ala,seq:ggc)
     gene            38283..38358
                     /locus_tag="RTF91_000059"
     tRNA            38283..38358
                     /locus_tag="RTF91_000059"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:38316..38318,aa:Val,seq:gac)
     gene            38386..38916
                     /locus_tag="RTF91_000060"
     CDS             38386..38916
                     /locus_tag="RTF91_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDZ4943006.1"
                     /translation="MQNTIIQKAIHEDLNSILAITKDALNAMKAMNFHQWDENYPNKV
                     VFQENIQTQELYVFKENDEILGFICINEKFEPKFYEQITFNKNYDDKAFYLHRLAVKQ
                     SAKGKGVAQKLLNFCENFALENHKASLRADTHSKNFPMNSLFKKLDFKFCGNFDIPNY
                     QDPFLAYEKILNQKAF"
     gene            complement(38896..39498)
                     /gene="leuD"
                     /locus_tag="RTF91_000061"
     CDS             complement(38896..39498)
                     /gene="leuD"
                     /locus_tag="RTF91_000061"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDZ4943007.1"
                     /translation="MQKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFH
                     DLRYLDDKESVLNMDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIA
                     PSFADIFKNNALGNGLLTIELGKDEVLEIVEELKKSQDKNIEISLLEKRVFFKDKIFS
                     FDLDEFHRTCLLEGLDNIALTLKHESQIKTYEKNSKSFLV"
     gene            complement(39500..40912)
                     /gene="leuC"
                     /locus_tag="RTF91_000062"
     CDS             complement(39500..40912)
                     /gene="leuC"
                     /locus_tag="RTF91_000062"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDZ4943008.1"
                     /translation="MIMAKTLYEKVFDAHVVYENENEFPILYIDRHLIHEVTSPQAFS
                     GLKMAKRKMARADLTLATIDHDVSTKSVDLNACSDMAREQITTLMQNTKEFGVRLLGL
                     GDKNQGIVHIVSPELGFTLPGITLVCGDSHTATHGAFGALAFGIGTSEVEHVMATQTL
                     KQAKLKTMKIECKGQFQKGVYAKDLILYLIAQYGTAKGTGYAIEFCGELIRNLSMEAR
                     MTLCNMAIEFGAKVGMIAPDEITFEYIKDKEFAPKGEEFQKYCEYWRSLRSDEGAKYD
                     ESIILDVSNIKPQISYGTNPSQVIAIDEKIPKISDFKNQSEQKSLLDALNYVNLEQDQ
                     ALEGVKIDIVFIGSCTNGRLEDLKIAADILKGRKIHENVKVLIVPGSMQVRKEAENLG
                     LDQIFIQAGCEWRYAGCSMCLGMNDDKANSGQRVASTSNRNFIGRQGKGSITHLMSPA
                     SAAACAIEGIICDNRKYLGV"
     gene            complement(40899..41975)
                     /gene="leuB"
                     /locus_tag="RTF91_000063"
     CDS             complement(40899..41975)
                     /gene="leuB"
                     /locus_tag="RTF91_000063"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDZ4943009.1"
                     /translation="MKTYKIAVLAGDGIGPLVMKEALKILIFIAQKYDFRFEFNEAKI
                     GGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDNLPIDQRPERASLLPLRKHFN
                     LFANLRPCKIYENLMHASPLKDEIIQKGVDILCVRELTGGIYFGKQDLSKESAYDTEI
                     YTKKEIERIAHIAFESAKIRKKKVHLIDKANVLASSILWREVVANIAKDYKDISLEYM
                     YVDNAAMQIVKNPSIFDVMLCSNLFGDILSDELAAINGSLGLLSSASLNDKGFGLYEP
                     AGGSAPDIAHLNIANPIAQILSAALMLKYSFKEEQAAQDIENAISLALARGKMTKDLN
                     SKSYLNTDGMGDSILEILKENNNG"
     gene            complement(41972..43507)
                     /gene="leuA"
                     /locus_tag="RTF91_000064"
     CDS             complement(41972..43507)
                     /gene="leuA"
                     /locus_tag="RTF91_000064"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDZ4943010.1"
                     /translation="MKDNKIIIFDTTLRDGEQALGSSLGINQKLQIALALENLGVDVI
                     EAGFPVSSQGDFKAVQNIACKVKNSTICALSRALDKDIDIAYEALKVAEHFRIHTFIA
                     TSTLHIQDKLKKDFDEILAMAKRAIIRARSYTDDVEFSCEDAGRTPIDNLCFMVENAI
                     KAGAKTINIPDTVGYTLPSEFANIIKILFNKVPNIDKAIISVHCHNDLGMATGNSLSA
                     ILQGARQIECTINGLGERAGNCALEEVVMAIKTRKDYLKGFYTNIKCENISKTSKLVS
                     AITNESIPSHKAIVGSNAFSHSSGIHQDGVLKNRQTYEIISPSAIGIHENRMLMTARS
                     GRAMIKTCLENLGYDENTYNLDDVYERFLRLADKKGQVYDYDLEALMFLSYENEEENE
                     FVLEKLNVISGNIPTACVCMRIKEDLKTEACTGNGPVEAVFNCIARITNLKPVLKAYS
                     IDAKSSGVDAQGQVDVDLEFKGRKFHGKGLSTDVIEASAQAFVSAYNAIYRSLKVEER
                     KMA"
     gene            43869..44498
                     /locus_tag="RTF91_000065"
     CDS             43869..44498
                     /locus_tag="RTF91_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943011.1"
                     /translation="MLKELLDIKKEMEPVIHEANVKLNVLAREVIVRKKEYEIYGPMI
                     DRVYLDNAIYVKVMSSGRDVKTDNVTIKNGFYMVFVAPEKESTKDIKNKLKVAYEGLD
                     NKFIATLIRSCQRFKEIINKTQTTLAKASKMNVVVKTNLGEASAALKFNINIEYTKEN
                     QKLTRENSKSAGSFRDTKTYINLVVEKSTDSKICEKLLDDVEKYFIGGG"
     gene            complement(44562..44706)
                     /locus_tag="RTF91_000066"
                     /pseudo
     CDS             complement(44562..44706)
                     /locus_tag="RTF91_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345087.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
     gene            complement(44771..45160)
                     /gene="queF"
                     /locus_tag="RTF91_000067"
     CDS             complement(44771..45160)
                     /gene="queF"
                     /locus_tag="RTF91_000067"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004278091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDZ4943012.1"
                     /translation="MRYGEKEIKEFDVEKMEIWPNDTKNDYIIKITLPEFMCCCPRSG
                     YPDFATIYLEYIPDQFVVELKAIKLYINTFMHRNVSHEASINEIYNTLKDKLKPKWIK
                     VVGDFNPRGNVHTVIECRSDMVVPKSI"
     gene            complement(45604..48198)
                     /gene="flgE"
                     /locus_tag="RTF91_000068"
     CDS             complement(45604..48198)
                     /gene="flgE"
                     /locus_tag="RTF91_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDZ4943013.1"
                     /translation="MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTM
                     FSQTVKIATAPTDGRGGQNPLQIGLGVSVNSTTRIHSQGSVQTTDKNTDVAINGDGFF
                     MVSDDGGLTNYLTRSGDFKLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFVD
                     PGMHIPAAQSTEVAIKANLNSGLNIGTSSRNLYALDSIHGWNNRTSRSEDENDTGTTQ
                     FYTTSKNSLDVTEKGVDAASLFNAKGQGLNLRDGQGIWISYADAAYSTNKVGQSAFDP
                     NLQQNQTAAFWGTPAQKVNLDITLNGVRIQNADIQSIDDAIAYINTFTAPTDTRDGTG
                     VRAVKSKDGSGINFINTNSDGTTDNMKNINLVVADTNTAGELWNAVWSAQNQTFTFNN
                     GQGAGNTPTINKNNSSLWTADTVTFTPPPPAAANTVQLNGALNAQVITAHKYIYSSNP
                     VDIGPMYNPDGGPAFQPDNNANTRPTDPGSAAYWDAVNGGLLNTDVRTFRTTEDLREL
                     LQRDARYGVDYDGSGTFATSDINQNIKVVVTADGHFAISNANEQSTVPANAINGVAAP
                     TTTNPKTMSFNITAYSDRQGTVSTNDAFTSIFKAFDGPLVVGNQIKESEQLKLSAFSA
                     GLEIYDSLGSKHTLEVQFVKQSTTQDGGNEWQMIIRVPEPAEINTTGEGPNNIIVGTA
                     RFNNDGSLASYTPRTINFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQATD
                     GYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTA
                     NSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQML
                     QTLIQLKQ"
     gene            complement(48401..48877)
                     /gene="ruvC"
                     /locus_tag="RTF91_000069"
     CDS             complement(48401..48877)
                     /gene="ruvC"
                     /locus_tag="RTF91_000069"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDZ4943014.1"
                     /translation="MKILGIDPGSRNCGYAIIEINKTKNILIEAGLIKIKPSTLQYQI
                     TELCEGLDLIFKNHSFDEVAIEDIFFAYNPKTVLKLAQFRGALSLKILQIHGDFAEYT
                     PLQVKKAVTGKAKATKEQVAFMVKRLLGLRKDIKPLDITDAIAVALTHAANLRVRV"
     gene            48979..50301
                     /gene="dnaA"
                     /locus_tag="RTF91_000070"
     CDS             48979..50301
                     /gene="dnaA"
                     /locus_tag="RTF91_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDZ4943015.1"
                     /translation="MNPSQILENLKKELSENEYENYLSNLKFNEKLSKADLLVFNAPN
                     ELMAKFIQTKYGKKIAHFYEVQSGNKAIINIQAQSQKQSNKSTKIDITHIKAQSTILN
                     PSFTFESFVVGDSNKYAYGACKAIIHKDKLGKLYNPIFVYGPTGLGKTHLLQAVGNAS
                     LEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEE
                     FFFIFNEIKNNDGQIIMTSDNPPNILKGITERLKSRFAHGIIADITPPQLDTKIAIIR
                     KKCELNDINLSNDIINYIATSLGDNIREIEGIIISLNAYATILGQEITLELAKSVMKD
                     HIKEKKENITIDDILSLVCKEFNIKPSDVKSNKKTQNIVTARRIVIYLARTLTALTMP
                     QLANYFEMKDHTAISHNVKKITEMIENDTSLKAKIEELKNKILVKSQS"
     gene            50461..51528
                     /locus_tag="RTF91_000071"
     CDS             50461..51528
                     /locus_tag="RTF91_000071"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDZ4943016.1"
                     /translation="MKLSINKNTLESAVILCNAYVEKKDSSTITSHLFFHADEDKLLI
                     RASDYEIGINYKIKKIRVESNGFATANARSIADVIKSLNNEEVILETIDNFLFIRQKS
                     TKYKLPMFNHEDFPNFPNIEGKNHFDIDSSDLSRSLKKILPSIDTNNPKYSLNGAFLD
                     IKTDKINFVGTDTKRLAIYTLEKTNNQEFNFSIPKKAIIEMQKLFYEKIEIFYDQNML
                     IAKNENFEFFTKLINDKFPDYEKVIPKTFKQELSFSTEDFIDSLKKINVVTEKMKLHF
                     NKDKIIFEGISLDNMEAKTELEIQTGVNEEFNLTIKIKYLLDFLTSIEEEKFTLSVNE
                     PNSAFIVKSQGLSMIIMPMIL"
     gene            51558..53867
                     /gene="gyrB"
                     /locus_tag="RTF91_000072"
     CDS             51558..53867
                     /gene="gyrB"
                     /locus_tag="RTF91_000072"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDZ4943017.1"
                     /translation="MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVD
                     NSIDEAMAGHCDTIDVKITTEGSCIVSDNGRGIPVDIHPTENIPTLTVVLTVLHAGGK
                     FDKDTYKVSGGLHGVGVSVVNALSKKLVATVERNGKIYRQEFSEGKIISEFGVIGKSK
                     KTGTTIEFWPDDQIFEMTEFDYEILVKRFRELAYLNPKITINFKDNRIGKHESFHFEG
                     GISQFVTDLNKKEALTKAIFFSVDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGT
                     HEAGFRMGLTRVISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKG
                     KLGSTYVRPIVSKASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKE
                     SLSVGTLPGKLADCQSKDPSESEIYLVEGDSAGGSAKQGRERSFQAILPLRGKILNVE
                     KARLDKILKSEQIQNMITAFGCGVGEDFNLSKLRYHKIIIMTDADVDGSHIQTLLLTF
                     FFRFMNELVANGYIYLAQPPLYLYKKAKKQIYLKDEKALSEYLIETGIEGLNYEGIGM
                     NDLKDYLKIVAAYRVILKDLEKRFNVISVIRYMIENSNLVKGNNEKLFNVIKKFLETQ
                     GHNILNYYINENEIRAFVQTQNGLEELVINEELFTHPLYEEASYIFGKIKDRGLEFNK
                     DILEILEDVETNAKKGATIQRYKGLGEMNPEQLWETTMDPSVRRLLKITIEDAQSAND
                     TFNLFMGDEVEPRRDYIQAHAKDVKHLDV"
     gene            complement(53906..54238)
                     /locus_tag="RTF91_000073"
     CDS             complement(53906..54238)
                     /locus_tag="RTF91_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HDZ4943018.1"
                     /translation="MKKLYLILALFFSVSWAQNLQINPDTGLIIDPDSPLVEANCLAC
                     HNSNLITNMHANKKTWLAAIRWMQESEGLWEIEPEDEEKILNYLEKYYGEKYDTRRRI
                     PLAILLQK"
     gene            complement(54244..55482)
                     /locus_tag="RTF91_000074"
     CDS             complement(54244..55482)
                     /locus_tag="RTF91_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HDZ4943019.1"
                     /translation="MENKHNKENRRDFLKNVGFGLLGVSVLSNFSFENFLGSKALAKE
                     LPHFKIEGKKDLIYHGEKPLTAETEIYALDSDFTKPENFFVRNNGLAPSLETIKERLH
                     KGWTLEIDGESVINKNSYTIEDLKKKFKTYTYALTLECGGNGRSEVIPSTKGTQWGYG
                     AVSCGRWTGVRLKDILQDCGIKNDAVYIGYYGIDTKLNGEEASPISRGVPISKALQDE
                     TLIAWAYEGKDIPYENGYPLRLVCGGYPGSTSGKWLYKISVRNKIHDGSKMESSYKVP
                     VNPVKPGDFNYKGEMKIIESMPVRSVITNIKNGSEIKANKKFEVRGKAWAGELEVSEV
                     YVSDDYGVTWIKAKVEKPLNRLAWQKWSTQISIPTKGYYEIWARAIDSQGNSQPMVLA
                     QWNPGGYINNACHRINVYGV"
     gene            55803..60293
                     /gene="gltB"
                     /locus_tag="RTF91_000075"
     CDS             55803..60293
                     /gene="gltB"
                     /locus_tag="RTF91_000075"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HDZ4943020.1"
                     /translation="MDLENILENNQSIGLYHPKNEHDACGIAAVANIRGIASYKVICD
                     ALEILMNLEHRGGAGAEENSGDGAGILIQIPHDFFKTQELGFELPKKGDYAVAQMFLS
                     PNTDAKEEAKEIFLQGLKDKKLEFLGFREVPFNPSDIGASALKAMPYFLQAFVKKPSK
                     VSAGLEFERVLYSTRRLIEKRAINVPKFYFSSFSSRTIVYKGMLLSTQLSDFYLDFKD
                     VNMKSAIALVHSRFSTNTFPSWERAHPNRYMVHNGEINTIRGNVDSISAREGLMQSEY
                     FENLNEIFPIIAKPSSDSAMFDNTLEFLALNGRTLEEAFMMMVPEPWHKNENMESKKR
                     AFYEYHSLLMEPWDGPAAIVFTDGVIMGASLDRNGFRPSRYYLTKDDTLILSSETGVL
                     KLDEKNIKAKKRLEPGKLLLVDTARGRVIADNEIKEHYANAKPYKKWLKNLVELEKQK
                     SGVYKHQFLKEDEVLKLQKAFGWSYDELKMSVAAMAENGKEAIAAMGVDTPLAILSKT
                     YQPLYNYFKQLFAQVTNPPLDAIREEIVTSTRIYLGSEGNLLKPDENNAKRVKIALPV
                     ISNEELFEVKALNKFQVKEFSILYNYSKKTLEKALDELCVKIEDEVKKGVSIIILSDK
                     GVDEKNAYIPALLAVSGVHNHLVRKNLRTHTSLIIESGEPREIHHFACLLGYGATVIN
                     PYLVYESIQKLIANKDLNLSYEKAVENFIKASSSGIVKIASKMGVSTLQSYNGSALFE
                     CLGLSSKVIDKYFTSTTSRIEGMDLEDFEKELIALHKHAFNDTHKALDSKGIHGFRSA
                     KEEHLIDPLVIFNLQQACRNKDYKSFKKYSALVDEKQVNLRSLMEFDFSEAISIDKVE
                     SVESIVKRFRTGAMSYGSISKEAHECLAQAMNKIGAKSNSGEGGEDEERYEIKDGVDK
                     NSAIKQVASGRFGVDLNYLSHAKEIQIKVAQGAKPGEGGQLMGFKVYPWIAKARHSTA
                     GVTLISPPPHHDIYSIEDLAQLIYDLKNANKDAKISVKLVSENGIGTVAAGVAKAGAN
                     LILVSGYDGGTGASPRTSIPHAGIPWELGLAETHQTLILNKLRDRVRLETDGKLMNGR
                     DLAIAALLGAEEFGFATAPLIVMGCTMMRVCHLNTCPFGIATQDTELRGRFKGKVNDV
                     INFMYFIAEELREYMARLGFERLDDMIGRVDKLRQKSVQGKAGKLNLDKILKSLPTYN
                     RTAVHFKDYKDNKLEKTIDYRILLPLCKNAVEKKESIKLSLEVGNQSRTFATMLSSEI
                     LKTYGKDALNEDSIHIKAIGNAGNSFGAFLLKGIKLEIIGDSNDYLGKGLSGGKIIAK
                     ISNEATFSPEENIIAGNACLYGATKGEVYLDGIAGERFCVRNSGALAVVLGTGVHGCE
                     YMTGGQVVVLGDVGANFGAGMSGGVVYIFGRHNEAHVNTELVDIKDLNAKDEKELKAV
                     IEKHITYTDSKKAKDILEKFDKKDFFKVMPRDYEKMLKMLDICKNEKDPNLAAFLKIT
                     QK"
     gene            60303..62066
                     /locus_tag="RTF91_000076"
     CDS             60303..62066
                     /locus_tag="RTF91_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HDZ4943021.1"
                     /translation="MAGFQSPITINEAMQRIKNNEYLLPAFQREYVWEPWQIEELFDS
                     LMRGYPISSMLFWKVKDESKTAWKFYRFLEYYREEYHTHNDYFNTSSHKDFDAILDGQ
                     QRLTSLYLALFGNYDIHRTYNKWEDNDRYFKICHFYFNLTQSKKPENENVEYEFLWLD
                     KLETKEQSIYIDKHQQKWFKCKSIYNILDVNDIMEFAENNNLQKKERKRLSEFHTLIF
                     NTKDESKINFYLEEEQNPDKAVNIFIRINANGEPLDYSDILFSIAIANWNKIDARTEI
                     NNLVDKINENFDISKDLILKGFLYLFHNNIKFQINSFDKNFIESIEAKWEGIKNAFIE
                     TFRLLRSFGFEAKTLSSKNAILPILYFIYHKDLTNNIVDSVKCNENRAIIKKWLLRAI
                     ILKPFGGSSDTVLSNMRKAFIKDFKQNSGFFDREIELFPLEEIEKEAKYIQTIDEEYL
                     ENNIIECRKNSPESFAVLSLLYPNLDYKNNNFHKDHLHPESAYKEYEKLCQNTENCIP
                     FNIYDSLPNLQMLDANENESKNNKPLKQWVNEKCNGNRKEFLRKHLIPDVDLSLENFN
                     NFIEERKKIIIDKLKSILNKE"
     gene            62069..63514
                     /locus_tag="RTF91_000077"
     CDS             62069..63514
                     /locus_tag="RTF91_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HDZ4943022.1"
                     /translation="MGNARGFLDFKRMDFKKIAPKERVLNYKEFTMLLDKKEQEIQGG
                     RCMDCGVAFCHVGVMSEGKDVGCPLNNLIPEWNDLIYRSLWKEAYERLDLTNPFPEFT
                     GRVCPAPCEDSCVCAINGTSVSIKNNELSIIENAFKENLVRANKPKQYNGKKIAIIGS
                     GPAGLACANTLNSLGYKVSVFERSDKIGGLLMYGIPDMKLDKSIVQRRVDLLKKSGIE
                     FKANENIDSKDKVSKLLKEFDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQNTKT
                     LLKTGKGADTAKGKNVLIIGSGDTSVDCIAVATRQGAKSIVRFERSPKRPLQRSQNNP
                     WPLKADIFTTDYGLEEAIAIYGKDPREYQKMTKKFLGKTHVEGVEANDLKREFKEGKD
                     INVEIPNSKKTYKADLVLLAMGFSGCEEAIAKNFGVKLDEKNNISTENFQTTHKKIFA
                     CGDARKGQSLVVWAIKDGIECALSLHQNLVK"
     gene            complement(63515..64090)
                     /locus_tag="RTF91_000078"
     CDS             complement(63515..64090)
                     /locus_tag="RTF91_000078"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDZ4943023.1"
                     /translation="MKTLFDTKELLNEFDINLIGIDEAGRGALAGPMMMAACKLNKKL
                     DRLCDSKKLSEKKREELYEIIIKNSNYLILAFSSEQIDTLGLSTCLKTGLKLIKKHFK
                     TENNFLYDGNTNLGINGIKTQIKADASILQVSAASILAKVSKDRVMNFLAKDFPCYEF
                     EKNKAYGTKAHKELIAKFGICKLHRKSFKLL"
     gene            complement(64123..64362)
                     /locus_tag="RTF91_000079"
     CDS             complement(64123..64362)
                     /locus_tag="RTF91_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HDZ4943024.1"
                     /translation="MKKLLFLFFVLTTFLFGAVNINTATLKELKGLNGIGEAKAKAIL
                     EYRKEANFTSIDDIKKVQGIGDKLFEKIKNDITVE"
     gene            complement(64428..65044)
                     /locus_tag="RTF91_000080"
                     /pseudo
     CDS             complement(64428..65044)
                     /locus_tag="RTF91_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343484.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin family protein"
     gene            65202..66878
                     /gene="ilvD"
                     /locus_tag="RTF91_000081"
     CDS             65202..66878
                     /gene="ilvD"
                     /locus_tag="RTF91_000081"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDZ4943025.1"
                     /translation="MRSDAIKKGHLKAPNRSLLRACGLKDEDFDKPFIGVANSYIDII
                     PGHYFLNDYAKIIKDEIRKNGCVPFEFNTIGVDDGIAMGHEGMLYSLPSRELIANSIE
                     TVMNAHQLDALICIPNCDKITPGMLMGALRVNVPTIFVSGGPMTSGLTKKGEKISLSS
                     VFEAVGAYEAKKISEEEFKDIECSACPSGGSCSGMFTANSMNTLCEAMGIALEGNGTI
                     LALSKEREELLRRAARRICEIALDERFKIRNIITQKAVRNAMVVDMAMGGSSNTVLHM
                     LAISREAGVALDIKDLNFISSKVAHIAKIAPSLNSIYMDDIHKAGGVSAVMAEISSQE
                     GHILELDALTITGESLKERLKNAKIKDENIIRKVDNAYSKVGGLAILFGNLAEQGCVI
                     KTAGIVGERKFKGKAVCFNSQDEAIKGIIKGKVQKGNVCVIRYEGPKGGPGMQEMLSP
                     TSLLMGMGLGADVALITDGRFSGATRGLSIGHISPEAAEGGLIGLLKDGDEIEIDVDA
                     YTIHVNLSEEEIAKRKKEFVLPQKEVSSRWLRMYQKLVSNASKGAVLDME"
     gene            complement(66890..67414)
                     /locus_tag="RTF91_000082"
     CDS             complement(66890..67414)
                     /locus_tag="RTF91_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YagU family protein"
                     /protein_id="HDZ4943026.1"
                     /translation="MNKYFQKHYTLAFFIGILAGIFGAIVKWGWEVPFPPRNPNIFWP
                     SDALERVTPPKIFLEQLGLPTDLTYVFSGMQMPLSIFIVHVGFSIVFGVAYCMIAEKW
                     HRITMWQGAVFGFFVYLFAHVIVMPLIAQVPPLSEIPFDEHLSEIFGHIIWLWGMEIV
                     RRDIRNRITKEIEE"
     gene            complement(67507..68733)
                     /locus_tag="RTF91_000083"
     CDS             complement(67507..68733)
                     /locus_tag="RTF91_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HDZ4943027.1"
                     /translation="MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFI
                     AKMEKDVDMRAIIEKGIFEFLGRVVVTDIRPDVYHEIVSQKKTEVNAWILSKIEPMIE
                     DIEDGEFLKRFEAYLNGNVCAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNK
                     VEEELEDYYELIGARKIALNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVA
                     ILGYFYSLKIKACDKRLENNFYCALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMK
                     LINEKILPFVPEDLRSEFSYILGIREGRNDEPNFVKNEFENRTYKNDKIELCSGSLNS
                     FNKNEFGAIDGKALKYCDKIAAYIEAGLSISYGVKSKELESGFLGMHEFFKENPTIDG
                     VNFFEICESLREYFKI"
     gene            68810..69490
                     /gene="queC"
                     /locus_tag="RTF91_000084"
     CDS             68810..69490
                     /gene="queC"
                     /locus_tag="RTF91_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDZ4943028.1"
                     /translation="MSKKALCIISGGMDSTLCAYLAKKEDYKIIALHFDYEQRTQEKE
                     RDCFEQICKALKVEKSYILDVSFIKDIGGNALTDKNIDIPKNELCINDTPPITYVPFR
                     NGIFLSIAGSLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQKFINEGTSKNFKVC
                     IKTPLVRLNKAQIVKLALKENVPLELTWSCYESEDEACGECDSCLLRLRGFEKAGFKD
                     KIKYKNKP"
     gene            complement(69510..71036)
                     /gene="dsbI"
                     /locus_tag="RTF91_000085"
     CDS             complement(69510..71036)
                     /gene="dsbI"
                     /locus_tag="RTF91_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbI"
                     /protein_id="HDZ4943029.1"
                     /translation="MNEINKTKNFYTLLCLAGFLIILLPVGIANFIFGYMLGDSPCTL
                     CWGQREAMIFIGVIALFIVRYGMKGKYLAALLIVTAVGLYQSFAHYGNHAHRDLDQGF
                     GLAVFGIHTYFWAEVVFWAVVLLLGVIFAFAPKFNSFEAELNGAKFRKYTKFSFAAVL
                     ISTIIVASNVFQAFVSTGVPPYLGQGDPVRFSLNPKYIIWSTDGWNGLWQNISFLGKR
                     DVKAPDYAFAPANEKLGVKFDNDINNSPFTKIDDELKITSEQTINFDKAINTLDYINN
                     EFVASSKWDVAFLDNNFSVKESFELDPYFSATIDPIIGIIPYMNDKFILMGSNKSFLR
                     FEKNPNASEEDIAKQYADFVKGNDKFKGQGEGLGRGRLDTVRAKFNHVASMSTDGNYL
                     YLATVPNNKDAKTFVISKVSLKDRVLSGEFTPKASLKEDKTLGDLYVTSMTFKNGEIY
                     ALSKNHNVIAVIDPAKEEVVKTIAFPSSITNARSIFFKDGKINILSYQDGANKLYTLN
                     "
     gene            complement(71049..71216)
                     /gene="dba"
                     /locus_tag="RTF91_000086"
     CDS             complement(71049..71216)
                     /gene="dba"
                     /locus_tag="RTF91_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein Dba"
                     /protein_id="HDZ4943030.1"
                     /translation="MEFLELLLVLIALILIIKKPEKENLAFGLVMVAWLLMVFIYVGH
                     KAGALLTIINL"
     gene            complement(71331..73109)
                     /locus_tag="RTF91_000087"
     CDS             complement(71331..73109)
                     /locus_tag="RTF91_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDZ4943031.1"
                     /translation="MTNKKTHFLIKFIILSALVSIFILVLLGIIFNNYSSSKDNKDLI
                     NTIQQLEISNEKINSVFQNSFHFINYDSSVQAVKKMRENFEKLKIFRIDISKAEEIFN
                     AKLIQLNYFKSANSIAVNSKIYLFELAKNYFEELEQNHESNKDNYKTMTSMLRVLATE
                     NILQKTTLNHLNMLIKEIKNDTKSENLQLFLKHYAMIVKQISIMQDNSSIYENNSLTK
                     ELKQINAFTQNAIEQSNLFKFYIALAVFGITLTLFVFFILLTLKKVIMPIHSLEKLSA
                     NLASKEANLHSRLNIDPKSELGQSAQYINSFISTVQNSIIEAIENAKSSHQNSQKLKN
                     NSMMLENSSNSQHEQIQGVKEITYVLDEHINLAGNLAQESIENMQDMHILMDKTELTL
                     SELINLINENNEKEQNVVANMDNLTQSADNITEITNSIKDIADQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRQLADKTSKSLLNINSTVNTIVQQINDNKALMDLIHDSMKETS
                     LKTNDLQQELANSMHKLESSIESTQTMKDRSMEIKDKMLILGTNIDKVNELANSVKDL
                     SCEIDNISQNVLNDASKLSEKLSSFQ"
     gene            complement(73099..74014)
                     /locus_tag="RTF91_000088"
                     /pseudo
     CDS             complement(73099..74014)
                     /locus_tag="RTF91_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006656059.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
     gene            complement(74159..75061)
                     /locus_tag="RTF91_000089"
     CDS             complement(74159..75061)
                     /locus_tag="RTF91_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDZ4943032.1"
                     /translation="MAYTKIKLSNNGKKAFQVLMDNLKISINEAQKLIDKKRLFCDGI
                     LIEEKNKILNGLVELIIYENNPKGVKIVFENEDFAVLEKESGILSHPNGRHCKYSLSD
                     EIWHLWGKEACVAHRLDKETSGLILVAKNKKAQINLKSLFEKKLVQKEYLALASGEIT
                     ENFIVDKAMDLAKNYDDVKTRMQICAQGKQAITEFEILEYFPTLNATLLLCKPLTGRQ
                     HQIRVHLHYKNHTILGDPLYGLAKEQIESILDEKLSPKQRLKLTGALRLCLHSYRLKF
                     QYKKQNFDINSKINIKEIFNNSTK"
     gene            75139..76467
                     /locus_tag="RTF91_000090"
     CDS             75139..76467
                     /locus_tag="RTF91_000090"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDZ4943033.1"
                     /translation="MVERYSREIMAKKWDIQAKYDAWLKVELAAVKAWNKLGLINDID
                     CEKILKNAKFDIARIDEIEKITKHDVIAFLTSVSESLGEESRFVHYAMTSSDCIDTAV
                     ALQIKESLELILEDVSLLLETIKKRALEHKNTLMVGRSHGIHGEPITFGLVLAIWYDE
                     ILHAKELLVHAKEVISYGKISGAMGNFAHAPLEFEEEVCKNLGLKAAPVSNQIIQRDR
                     YAQVISAIAILASSCEQIAVAIRHFQRTEVYEAEEYFSVGQKGSSAMPHKRNPVLSEN
                     ITGLCRVLRSFVAPALENVALWHERDISHSSVERFILPDAFITADFMLMRLTNVIDKL
                     LIYPENMMKNLNLTGGLVFSGRVLLELPFKGISREEAYKIVQRNAMKVWEDLQNGKAG
                     INEKNESLFLLALLADEDLRRSLSEEDIRKCFDYSYYTKNVDAIFKRTFK"
     gene            76483..78852
                     /locus_tag="RTF91_000091"
     CDS             76483..78852
                     /locus_tag="RTF91_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDZ4943034.1"
                     /translation="MKVIKRNGRTEELDVTKIKKCTSDAVKDLEGVNLSELELDAKIQ
                     FRDGISTEEIQKTLIKTAVDKIDIDCPNWTFVAARLFLFDLYKRVNGMNRYNHLREYF
                     QKGEKEGRILLGLKEKYDLDDLNAYIKPERDMQFTYLGIKTLYDRYLIKDSKGMPIEL
                     PQQMFMAIAMFLAQNEFNSQEWAKKFYDLISKFELMLATPTLSNARTTRHQLSSCYIG
                     STPDNIEGIFDSYQEMSLLSKFGGGIGWDWSKVRAMGGSIDGHKNAAGGIIPFLKITN
                     DIAVAVDQLGTRKGAIAVYIEPWHMDIGDFIDLRKNSGEERRRAHELFPALWINDLFM
                     KRVRANDKWTLFDPADTADLCDLYGEAFEKRYEKYEKDESITKEIVEAKDLWKKILLN
                     YFETGLPFLCFKDSANRANPNAHVGIIRSSNLCTEIFQNTEPNYYQIKVVFENGDEVH
                     FDEDQKVMIDGGYEKPAKKISTLDSINGNKVYIVEKYKNDGKTAVCNLASINLSKVYT
                     KEDIERVVPTAIRMLDNVIDLNFYPHRKVKDTNLKSRAIGLGVMGEAQMLAETKIHWG
                     SDEHLNKIDEIMEQISFEAINASSNLALEKGSYEDFKGSNWSKGIFPIDVASPKAKAL
                     TLREGLFDQSECDWAKLREKVKKDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKW
                     FEQNLSGMIPVVVPNLSLDTWQYYTPAYELDQKILVKAAAVRGKWIDQGQSLNIFLSL
                     DKASGGYLNEIYQLAWELGVKSTYYLRSESPDSEKVNVTDRSIECEGCQ"
     gene            complement(78892..80277)
                     /locus_tag="RTF91_000092"
     CDS             complement(78892..80277)
                     /locus_tag="RTF91_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HDZ4943035.1"
                     /translation="MNKQFFQDFLMLSQAYTIATLAILCVIFYALKKMQDIKINFSLR
                     MLFALLMGLGFGLALQYLASFTNAKETSNILWYSETKHWFAFISSVFVAFIKMLVIPL
                     ISICIIKVIIEIDKNIKISSLLGISLFWILFSTAIAATLGIFLGYSFDLGSNFAIHEG
                     NKQIREIQTFSNIILGLIPSNIVTAINKENIIAIVIFSFFVGISAKKISKKEEHEQAF
                     KSFQNFILTFYNIMMSMTATVIRFMPYAVVCMMANVLLSNGFEAIKTAGLFIILIYIA
                     MFIMFGVHFLLLISQGLNPIKYAKKAFPVWLFAFSSRSSLSTLPMTTSTLQNKFGVNP
                     AIANFVASIGTTTGLNGCAGYFPALAAVFVAFATHTYIDFTFALMIVLVAVIGSLGIA
                     GVPGSATMAASIMLAGIGFGNNFVMLSLILAIDPIIDMARTASNVSGAMTSALCTAKN
                     LKALDKEIYNS"
     gene            complement(80397..81020)
                     /locus_tag="RTF91_000093"
     CDS             complement(80397..81020)
                     /locus_tag="RTF91_000093"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HDZ4943036.1"
                     /translation="MQITLLFHTPLSVCSHATRTCWQSFEKGDCGGEKDKELIDRVGN
                     KFKHASTLEHLNYTFYIQGISRACLQEVARHRHTSPSVKSTRYTLKELRNENEFKVGD
                     FENASRYLVLCGNEEVDNASIKALENLRTILQKSISLDIAKYCLPESYKTELTLTINA
                     RSLQNFISLRSSKSALWEIRNLANALFEALPQEHKFIFEHCLHKDIE"
     gene            81136..82767
                     /locus_tag="RTF91_000094"
     CDS             81136..82767
                     /locus_tag="RTF91_000094"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HDZ4943037.1"
                     /translation="MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSVLKADP
                     YINVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYQSVIE
                     KERRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRA
                     LRLEVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALD
                     RDLKDKIAISCGVEKNCVIESVDAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMEN
                     WDSLVKRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAALDTKVELKWVDSEKL
                     ENLESTEVFKDVSGILVAGGFGYRGVEGKIKAIQYARENKIPFLGICLGMQLALIEFA
                     RNVLKLKDANSSEFDERCQNPVVYLIDEFMDTNGEKQIRTAKTPLGGTMRLGAYKCDI
                     KEKSLLAKVYDKAKSVKERHRHRYEANPKYRADFEKHSLIVSGESKGLIEAVELNSHP
                     FFLAVQFHPEFTSRLERVNPVICGFIKAAINYEDN"
     gene            82754..84325
                     /gene="recJ"
                     /locus_tag="RTF91_000095"
     CDS             82754..84325
                     /gene="recJ"
                     /locus_tag="RTF91_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDZ4943038.1"
                     /translation="MKIIDKNEIKKILASRFEKDLHTKLCDLPLPCCLKDTYKAANRI
                     KEAIEKNEKVAIVGDYDVDGIISCVVMAEFFDDIGFDYIVRIPNRFKDGYGLNAEIIN
                     KLDVNLIITVDNGIAAFEAAVLCKEKNIDLIITDHHMPQDTLPDAFAIINPKQKDCDF
                     PEIEICGAQVAWYLIAALKEVCKLNYDMSKFLELLAIAIIADMMELRDLNRALVRRGI
                     EHINKSKRAAFKAIKHYYQKDKFALDNIGFLIAPLINSAGRMDDASISYEFLHTKDFN
                     KALEYLEQIVSFNESRKDEEKQLFEDSLNQIDENDSCIVVSGLNWHEGVLGIVASRLA
                     KHFNKPAFVFSQNEEHLKGSARSVGKIDILTLISKTNSMLSNYGGHKGAAGISLNFEN
                     FEQFKNKIKKECSQISESEFLDTDEILGILEPSEIDFEILEILESFEPFGHKNPRPFF
                     VLENLCVKNKKLLGKDEKHLKLILTKENKTIEALFFNFDKEPELNQNINLLGSISKNE
                     FRGLVTPQFVIKEIL"
     gene            84404..85450
                     /locus_tag="RTF91_000096"
     CDS             84404..85450
                     /locus_tag="RTF91_000096"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005021248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II asparaginase"
                     /protein_id="HDZ4943039.1"
                     /translation="MKRLLLCVLVFLSIGACMAEAKPKIAILATGGTIAGSIDSAVAT
                     TGYTAGVVGVDVLIKAVPQIQDLANISGEQIANIDSSNMRDEIWLKLAKEINKLFVEG
                     VDGVVITHGTDTMEETAYFLNLTIKSDKPVVLVGAMRPSTAISADGPKNLYNAVALAA
                     DKDAKDKGVMVAMNDKILSARGVVKTHSLNVDAFSSPDFGDLGYIIDGKVFFYNNVAK
                     AHTKNSPFDVSKLTSLPKVDILYTYSNDGSGIAAKALFENGTKGVVVAGSGAGSIHED
                     QKNVLKELIKKGLDVVVSSRVVAGRVVVSDSDKKLGFISAEDLNPQKARILLMLALTK
                     TSEPKKIQEYFLKY"
     gene            85724..>87684
                     /locus_tag="RTF91_000097"
     CDS             85724..>87684
                     /locus_tag="RTF91_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HDZ4943040.1"
                     /translation="MGISRRNFIKGLAATSAVVSVNPLMAAGETKFYDIKKVPHATHF
                     GAFWADVNSEGQIVKVTPQQSDKHPSVITDAIIDRTYSDTRVKYPCVRKSFLEGNKKP
                     NLRGKEPFVRVSWEKAYDLILQNFKETPIENLFNASYGGWGHVGLLHNCNSVAGRFFN
                     TALGGHIGTDGEYSNGAAGKVNASIMGDLEVYSLQTAHEQILKNTQVYVLWGADLYKC
                     NQIDFKVANRGNDEYYKKYRKSNIKFISIDPQYTQTAEILDAEWIKIRPNTDVALMLG
                     MMNYLYKSGKYDKKFIEKYTDGFDKFLPYLLGKSDGIDKTPAWAAKITGLDEKVITSL
                     ADTFVKNRTFLAGNWAMQRAHHGEQADWTLMVLAAMIGQIGLAGGGFGFSMHYSGGGQ
                     AFSGVRLPVGLPQGKNNLDFNIPASRISEAILNPGKTIKFKGKEITFPKIKMMYVVGA
                     SILGHHPDTNELIRAIRTLDTVIVHEPWWTPMAKMADIVLPSTTTLERDDISFGGSYS
                     QDYVYAMKKVIEPVFESKNDYDIFEEMAKRIGEREHKKFTGGKTKEQWLEGFYGRSDC
                     PYYMEFADFWKQGFIHFEPPKEAYDYVRHSEFRANPVANKLATESGKIQIYSPKFEKY
                     NLEDFKAHPTWFEPAEWLGNEKLVKKYPF"
BASE COUNT        29545 a        14064 c        13728 g        30347 t
ORIGIN      
        1 tttgcatagc cttacattat tattttttaa gtcaagattt tcctattttt actagttctt
       61 taatcgatag cgaaggcata agttctttag gttttatcac tttagctttg cttgtttgta
      121 ttttaatttt tttcttttta aaatggcaaa aaaattttaa tcaaaaaaca agctttatac
      181 tttttttact acttgttttt atagaaagcg ataaagctct agctaatatc ttgcttacct
      241 taatgcgaaa ttccatcata gaaactcatg catttttggt tagttttgta ggaaaaagta
      301 attattttgg tatttttgga atttatgttt atttattttt tattactgtt ttagcatttc
      361 taagtttaaa aattcgcaaa aaaaatataa ctaaaaaaca aattttagat ataagctatc
      421 gcaaaaacga agctaaaaca agtcttatta atcgctattt ttctagtgtt tttatctctt
      481 gtgttgtaag cttttgcatt attttatact tttttatggt aagctctaaa cctctaacca
      541 tagatgagcc taaagaaatt ttacccgata gtaatggtaa atttatcttt gatataactc
      601 ttttaagaga taataaactt caccgctttg cttatattag tgcggaaggc aaagtgataa
      661 gattttttct tatcaacaaa agagaagaca aagattcgcc tgtagcagtt tttgatgctt
      721 gtatgatttg tggggatatg ggatatatca aaaaagatgg gcagcttatt tgcatttctt
      781 gtaatgtgcg tattttctta cctagtgtag gtaaaagcgg aggttgtaat cctatcccac
      841 taaaatacga atatgatggt aaaaaaatta ctatagatgt taaagatgtt atagcaggat
      901 ctaattattt tagtcaaatc aaagaaatcg aagtggaaga tcctgtatca aaaactaagg
      961 ttataaacac acaagctcct ttttcttata gctataaagg aattacttat tatttttcaa
     1021 atcaaaagaa ctatgaagaa tttaaaaaag atcctatgaa atatgtagaa gaaaatgaag
     1081 ccctattttt aattcaaagg agaaatgatg tttgctaaaa tgatttttaa ctctatattt
     1141 aaaaacaaaa ttcaaaaatt tttagccttt cttacttgtt ttttagccat acttttactc
     1201 tctactatgc taaacatcac cctaagtata ggagatgaag tgactaaaca acttaaaagc
     1261 tatggctcta atatccttgt tttgcctaaa ggttcaagtc ttagcataga aataggcaat
     1321 gaactttatg aacccttaaa aaacaaaaac tacttagaag aaaaaaattt atatatgatt
     1381 aaagacattt attggcgtaa caacatcacc gcacttgctc cttttttaga aggtaaaatt
     1441 acaattgaaa actcccagca aaaagtgctg ctttatggta cttattttca aaaagccata
     1501 aaaattaaag atgatgatga ttttatcaca ggtataaaaa gtctttatcc ttatttagca
     1561 gcgcaaggag aatgggcaaa agatgatagt gatgaaatca tgctaggtga agactttgct
     1621 aaaaataata aattaaaaat aggagatact atcaaactca taggagaaaa caatcaaagt
     1681 aaagaagtaa aaattgtagg tattttactt catgctaatc ctaaaatgtc taataaaatc
     1741 atcgctcctt taaatttagc tcaaaattta cttaacaaac aagggcttta ctcaagtgcg
     1801 gaagtaaggg cttttactat acctgaatca accctttctg aaaaagtgcg tcgcatgggt
     1861 gaagaaaaat tagatcaatt agaatatgat aaatggtatt gctcagctta tgtgggttca
     1921 atcgctagtc aaattagcga tggcttacca ggggctgacg caaaaatact aaattccata
     1981 agcgatgctc aaagtctagt agttaaaaaa attcaatcct taatgggcat tacttgtatc
     2041 atttgcctta ttgttgcaag cattgcgatt tcaagtctta tgagttctga aattcatcgc
     2101 agaaaaaaag aaataggact tttaaaagta cttggtgcta atactttcca aatttatcta
     2161 atttttgcta gcgaaaattt aatcgtggct ttattcgctg ctttatttgg ttttattttc
     2221 ggcacagcac tttctcaaat cattagtctt agcatttttg gatattttat tgacatagcc
     2281 tttatagctt tacctttaag ttttattttt gcaggactta ttgccttgct aggttgctta
     2341 cttcctataa aaaatatcac acaactttcg gcagcaggag tgctttatgg tagataagtt
     2401 tttccttaat gagcttttta aaagtattag tttttcttat caaaggcttt ttattatagt
     2461 tttaagtgtt tttataggag cacttacttg ctcagctttt ttaaatattt actttgatat
     2521 tgacactaag ctttctaaag aattaaaagc ttatggagca aatgtaatga taagccctaa
     2581 acaagatgaa aattttatat ccgatactga ttatgaaaaa ataaaagaaa atttaaaagc
     2641 tagggcttta actccttttt tatatgattt tttaaattta ggtagcacaa gcggagtggt
     2701 tttgggtact gattttagag ccttaaaagt cactaaacct tttttagaag tcaaagaagg
     2761 aagtttttcc ctaaatgatt ttgatgaaaa ttcagtcttt ttaggggtta atttggccaa
     2821 acaactaggt ttaaaaacag gcaatgaact tcaaatttat aatcccaata atggaaaaag
     2881 cgtaaaactt atcataaaag gcatactttc aagcaatgat gaatttgata gcattgcttt
     2941 agctcctttg aacgtggtgc aaaatttaag tgataaagca ggtattaact atgccaatgc
     3001 tgtagtttat ggaaattttg atgaagttaa aaccaaaaca aaagctatta gtaatgaaat
     3061 catcaatgca aaacctatat cttctgtatc tttaagcgaa ggtttagtgc ttggaaaaat
     3121 caaagcttta atgtttttaa tcatacttat agtattgatc atagttacca ctagtgtcaa
     3181 tacaacttta agctctatta tattttctcg caaaaaagaa atcgcactgc gtttagcctt
     3241 aggtgctaaa aaaagcgaaa ttttaaaact ttttgctagt gaatgcttta tagtaagttt
     3301 ttttgctagt ttgattgggg ctttttgtgg aatatttcta gccaatatct ttggttattt
     3361 gatttttaat tctagtattg attttagatt tatagctgtt tttatagctt taatcatttc
     3421 tttgattttt gcctttttgg ctgcattttt tcctataaaa aaagcattaa aaatcaatgt
     3481 gtgtgaaaat ttgaaaggtg aatgatgaaa aaagaactta ttaaaataag caatttaaat
     3541 aaagaatttg gaaaagttaa agccttaaat aatatcaatt taagcgtcta tgaaggagaa
     3601 tggcttgcca tcatgggtcc atcaggaagt ggaaaatcaa cacttttaaa tatattatca
     3661 ctcatggata ctccaagtag tggcgagtat ctcttagata gtgaaaacct agagcaaatg
     3721 gacgaagagc aaaaaatcac tttacgtcgt gaaaaaatag gacttatctt tcaacaattt
     3781 catcttattc cctatcttaa tgccttagaa aatgttatgc tttctcagta ttatcactca
     3841 agcgtagatg aagaagatgc taaaatagtt cttgaaaaag taggactttc acataggctc
     3901 actcatttac ctagtcaatt aagcggtgga gagcaacaaa gagtttgtat agcaagagct
     3961 ctaatcaaca atccagaact tctacttgca gatgaaccta cgggaaattt agatgaagct
     4021 aatgaaaaaa tcgttcttca aaccttacaa aaattaaaaa acgaaggtaa aacgatagtt
     4081 ttaatcacac acaatcctga tttagctaaa tttgcagatc gaacccttat cttacaacat
     4141 ggagtattaa aatgaaaaaa agctttttaa tcttatgtgt tttgtttttg ctcaacgctt
     4201 gttcttttga aaattcaaaa gatactggaa aaatcggaga aaaaagtgtt gaaatttcag
     4261 ccaaagatac tttaggaaaa gctgtaaaac tttctgatga taatacaagc ttaaaagtct
     4321 tagttttttt tcaaaatggc tgtccttctt gcttaaaaga acttccttct ttggatgaat
     4381 ttgtacaaaa tcatccaaat aaaatcagtg tttatgctat aaattctata gataatgcga
     4441 atgtagttaa agttttagcc gaacaatttg attttaaaaa tatcaaagtt ttaaaagacg
     4501 atcttaaaat aaccaatgat cgctatgctg tatttgcaac ccctactacc atcatcatta
     4561 aagatggaat gataaaagat agaattttag gagaaaaacc atgggaattt ttcgagtcca
     4621 aacttatttc tttgctttaa tcatagcttt atcttttata gcttgtgata gtggagaaac
     4681 atttaaagct ttaaatagca ataaaactta taatttcgcc tataatggtt ttgaaaaaag
     4741 tttaaaacta aataatgaag cacaaaattt tgctctagtg ttttttacca aagattgcgg
     4801 agtttgcaaa gaacaaattc ctattttaca gaatttagcc aaaaattatg attttaatat
     4861 ctttgtggtt ttaggcgatg caaatgatgc aaatgatgca caagcttggg ccaatgaaaa
     4921 aggtttatcc aatttagcaa tgttttacga aaaaagagct gctaaatacc tttcaagtgc
     4981 cattggggat atatatggag tgcctgtact tagttttttc aaagaaggaa aaatggatga
     5041 aaaatttata ggcttaactc catatagcat acttgaaaaa gaaatcaaaa aagtaaaaag
     5101 ttaattcttt ttcatttaaa ttaaagtttt ttatctccta taaaatatcc gtaaagctca
     5161 taatttccat cttttttcat taaaattaca ggatattttt cattatatcc ttgttccatt
     5221 cctggacttc cttgtggcat cctaggagct gaaattccta tcacatcttt aggtttgttt
     5281 tcaagtagcc acgctacagc actttcagga atatgccctt caatagcata gccttcaatc
     5341 acccctgtat gacaactttg atactcatct ttaatgctca atttttcttt tatcttaaga
     5401 aaatcattag ttttatggat gctaacctta taacccttag ctttcatata atcagcccaa
     5461 agatcacaac aaccacaagc agggctttca taaatttgta tctctttagc ctgcgcagca
     5521 gctaaaaaaa tggttaaaat caaaatactt tttttcataa acactatcct aaaaaaatat
     5581 acaataatac ttttataaat ttaatattat cataatattt taacacgaaa agcacattat
     5641 ataaaaattc tatcttaaaa ctataaaagg attttttaaa taaaaattta cctataaata
     5701 taaaaataaa accaaaatgt aaaattaagc agaaaattcc gttaagatta ttttttataa
     5761 atttgtatta aatataacta ctctttgagt tgggattttc atgagtaaaa tcgttgagtt
     5821 tttagttttt attttagaat taatacacga gataatcaaa ctcattgatt atctcaaata
     5881 aaaaccacgc ttgatctaaa tttaatgcaa tcatactaaa aaacatttaa ccaattatta
     5941 gttatgacat tataaaatat ttattgctaa agatatttta aaaacgaaat aaaaatttat
     6001 tgcaaatcaa cttacaaaat aactttaaaa gtatggtggt gcggatgaaa ggacttgaac
     6061 cttcacgcat tgctgcacca gatcctaagt ctggcgtgtc tgccaatttc accacatccg
     6121 caaaagtggt acgcccaaga ggattcgaac ctctgaccta cggcttagaa ggccgttgct
     6181 ctatccagct gagctacgag cgcatataaa atcttggtgg tgcgcccgat aggaatcgaa
     6241 cccataacct acagatccga agtctgttgc tctatccagt tgagctacga gcgctatgaa
     6301 tggggtgagt gatgggaatt gaacccacga ccctcaggac cacaatctga tgctctaacc
     6361 gactgagcta cactcaccat tttgtataaa tttataaaaa atggtcgggg tgaaaggatt
     6421 cgaaccttcg gccccttggt cccaaaccaa gtgcgctaac cagactgcgc tacaccccga
     6481 aaaggaaata ttttatcaca aaataatttt aaagtcaagg attctcatct cttatcctta
     6541 aaaaaaccgg aaatcgaggc aaagaatttt tagtcgatcc attaaattta taagtcacaa
     6601 tactaccaat ttttggagga ttttttctat ctttatcctt taaaccacta cctattttaa
     6661 taatttttcc atttggcatt ttacagagca aagcaccgac ttgattctca aatttgccct
     6721 tacctttact aaatcctacc aattcacatt ctgcatcatc ataaggtttt agtttcattg
     6781 catttttact tctgcctttt tcgtaaggac ttaaattttt gcgtataaca ataccttcac
     6841 cttgattttt tataatattt tcataaaatt gatttaaatt gttttgattt tcaactggaa
     6901 tttgtggaat aatttttata taagcattag gatatttttg caaatactct tctaaaacag
     6961 ccaaacgatt tttaagactg caagaagaaa gtcgaaattc ttcacaagca tttggcacat
     7021 caaaaatatt ataagttact tccttccata aggccaaatt gctgttacca ctgcgaatta
     7081 aagctgaaat ttcatcaaat ttattccttg ctatccaaag ttctccatca atagcgaaag
     7141 gagggaaatt ttttgtaaaa aaatcaggag tttttatttt gtagttttga cgagttttta
     7201 gatatttccc atcccaaatt ccgcgtacac catcaagctt ttcactcatc aaataagcat
     7261 taaaatcttt agagttgaaa tcttgtttat taaatttgct aacaagtaaa atctcatcag
     7321 caaaagctaa acaaacacaa catattaaaa aaataaatct catcaaagca gattaatcat
     7381 atatccagtt ccatcttttt ggatattata attataaatt ccatcaagat atattacaag
     7441 tcgataatac cctttatgag atccaaaatc tatgcgttta aaaatagaat tgctaaggcg
     7501 tatgtttttt gtagggctga tcaagttaga tctaaaatct atcacaattt tactaggatt
     7561 tcccaccgaa aaatctgtaa tcatttcatc actagtatta agctttattt tatttttata
     7621 aaccgcataa gaaataaaat cataaatctt tgcaacttgt agaggtattt caacattagc
     7681 tgttgaattt gattcttgct tggagctgtt tttttcaggt atagtgactg aaacatcaag
     7741 cacttttgaa ggatcaggac ttttaaatct tgatatagta taaatatcat gccaatcaat
     7801 actcttatta atatctaaat caattttatc ttcacttcca tctaagttaa tataattaaa
     7861 agtaatgctt tttaaaattc ttgcactaga gttaaattta acttcttctt tttgaaattc
     7921 aggtggaaca atcaaagtta tgttttgatc tgttttaaaa ggattttcat cagcatacaa
     7981 aagagaggta aaaataaaaa atattgctaa aattttagtt ttcatttggg tataatcctt
     8041 ttaattcaaa ataatctttt tgcgctttgg cattttgttc tttaagcaaa ataatctttt
     8101 tattaagctc ttctttggta ttttctaaac ttaataaagt atctaaagaa tactgcccaa
     8161 aaaacatatt gccaaaataa attgctccaa ttacaacaag aaaagcccaa aaaaccattt
     8221 ttataacatg tgtataaaaa ctcttttttc ttgtgctttc gtcgtattct ttaagtaaat
     8281 cgctcagagt ttttctccta agtattcatc actttcaagt tcaatttcaa gtaagcgatt
     8341 gtattttgca gttctttcgc ctcttgctaa agctcctgtt ttaatttgtc ctgtatttaa
     8401 agctacggca aaatccgcta taaaagcatc ttcactttca ccacttctat gactcatcac
     8461 acatttataa ttatttcttt gtgccaaacg tacggttctc atagtttggg taatggttcc
     8521 aatttgattt ggcttgatga gcacagcatt tgccattttt ttaatgatac cttctcttaa
     8581 aatatcttca ttagttacaa ataaatcatc acctacaagt tgaattttat tgcctaattt
     8641 ttctgtgagt ttaatccagc ctttaaagtc attttcagct aaaccatctt caatgctaca
     8701 aattggatat tttgcacaaa gctctacata gcgttcgatc aaatcttcac ttgaaaaagc
     8761 tttaccttcc atgtgatatt tgccttcttt gaaaaattct gtacttgcta catcaagagc
     8821 gatttttaca cggttttcat aacctgcttt tttgatacaa gtcattaaaa gatcaatagg
     8881 ttctgtatta ttagccaaat ttggagcaaa accaccttca tcacctaaag cagtagaatg
     8941 accagaactt gctagttctt tttttaatat cgcataaatt tcacaaaccg aacgcaaggc
     9001 ttctttaaaa cttgtaaaac caaaaggcat aatcataaat tcttgaaagt ctacattatt
     9061 atttgcatga gcgccaccat tgataatatt acacattggc acaggtaaaa tacttgcatt
     9121 tgcaccacct aagtagcgat ataaaggcat tcctaaagca gtggcagcag cacgagcagt
     9181 tgccatagat acacccaaag ttgcattagc tcctaaattt aaataattat ttgtcccatc
     9241 aagctcacgc aaagtatcat caagttgagt ttgattaaaa gcatcaagtc ccaaaatttc
     9301 atctgcaatg gtttcgttga cattacaaac agcttttaaa acaccttttc caccaaatct
     9361 ttcatcatta tcacgcaatt ctaaagcttc ttttgagcct gtacttgcac cacttggaac
     9421 gatagctgca cccatacttc catcacttaa cgtaacttcg gcttttacgg ttggatttcc
     9481 tctgctatca agaacttcat aggctctaat atcttcaatt actagcatta ttctccttca
     9541 tcatcttcac taccgctaat cataccttct attcccatag aatcttgaat cgcttttgtg
     9601 atttcatctg caatttcagc gttttctttt aagaaagctt ttgaattttc tctaccttgt
     9661 ccaagttttt tatctttata agaaaaccat gcaccacttt tatctacaat atcaagtttt
     9721 acaccatagt caattaactc accttcgcgg cttaaacctt ctccaaacat cacatcaaat
     9781 tcagcttgtt taaatggagg agcgacttta tttttaacca cttttacttt tacgcgattg
     9841 cctataggct cttcattttg ctttaaagtt gctacttttc taacatccaa acgtacagaa
     9901 gcataaaatt tcaaagcatt tccgcctgtt gtggtttcag gagtgccata acccatagca
     9961 ccaattttca tacgaatttg gttgataaaa attacagtgg tattcatttt atgaactata
    10021 cctgtaagtt ttcttagagc ttgagacata agtcttgctt gaagtcctac atgctgatca
    10081 cccatatcgc cttcgatttc tgcttttgga gtaagtgctg caacgctatc tactacgata
    10141 agatctactg caccacttct tgctatagtt tctacaattt ctaaggcttg ttctccaaaa
    10201 tcaggttgag aaacatacaa atcatctgta tttacaccta aatttttggc atattttaca
    10261 tcaagagcat gctctgcatc gataaaggca caaacaccgc ctgctttttg gcattctgcg
    10321 ataatgtgta aagttaaagt ggttttacct gaactctcag gtccataaat ttctatgatt
    10381 cttccttttg gaactccacc tatacccaaa gcaagatcaa gtccaactga acccgtgcct
    10441 atgctatcga tttgttcgac ttccttatcc cctagtctta agatagtacc ttttccaaag
    10501 gttttatcta aactttttag ggcagcgtct agagattttc ttttattatc atccataatt
    10561 ttccttaaaa attctaaaat ttttagttag aattctaaca aaataaaatt aaataatgat
    10621 ttattttgct agaattaaag caaagattta caaggaagag catagatgaa aaaaattact
    10681 attgcacatt ctcctgatgc tgatgatatt tttatgtata tggcaattaa atttgggtgg
    10741 ataggaaatg attttgctta tgaaaataca gccttagata tacaaacttt aaatgaattt
    10801 gctttaaaaa atgaatttga tgctacagct atttcttttg gactttatcc tttaatcact
    10861 tctgaatacg cacttttacg tacagcggta agttttggtg aaggttatgg accaaaactt
    10921 atcaagaaaa aagatacgca tttaaaaaga aattttaaag tcgctttaag tggagcaaat
    10981 actaccaatg ctttaatttt tcgtatgaaa taccctgaag caagaattgt ttataaaaat
    11041 tttttagaga tcgaaaaggc agttttaagt ggtgaagtag atgcaggggt tttaatccat
    11101 gaaagtattt tagaatttga tcaaagtctt tgtgtggaag cagaactttg ggatatatgg
    11161 cttgaatttg ctaaaaaaaa tttacccttg cctttaggtg gaatggcttt acgtcgttct
    11221 ttgcctttaa gtgacgcgat taagattgaa agagatctta ctaaggctgt aaaaactgcc
    11281 gatgcaaatc gtaaaatttt agctcctatg ctaatggaaa gaaaacttat ccgtgttaat
    11341 gaagaaaagc tcgatactta tcttaattta tacgccaata aaaattctat taacatgaat
    11401 caaacacaac ttttagctgt agatacgctt tttaaactag gatatgatta taaattttat
    11461 gataaaatca tacatgtaaa tgattatctt atccctagtg aatatgaaga agctagaaat
    11521 tcttaaaaag gattaaaatg gatgaaagta ctttagttgc tcttggagtg caaactttta
    11581 aaatcacgct tttactttcc ttacctatgc ttttagcggg acttattgca ggacttttaa
    11641 tcagtatttt tcaagcaact acacagatta acgaaatgac tctttctttt gttcctaaaa
    11701 tcatcttggt tgtaatcatt ttaatttttt tgatgccttg gatgactgca actatgattg
    11761 actttactga aaatatacta aatcaaattc caacttttat caaatgatca ttgattttaa
    11821 aaaatactct tctgtacgca taggaaatga atttgaagtt ttaattttgg atcaaatttg
    11881 tgattttgat ggttttttag taggtggtgc aaataaccta ctagttagtc ctaagcctaa
    11941 aaatatagga attttaggag ataattttga ttttatacaa attttggatc aaaataaaga
    12001 ttttatacat cttcgtatag gttgtaaaac aaaatcaagc aaaatgtatc gttttgctaa
    12061 agaaaataat cttaatggtt ttgagtattt aagcaaaatt cctggcacct taggcggact
    12121 tttgaaaatg aatgcagggc ttaaaggaga gtgtatcagt caaaatttac ttaaaattgc
    12181 cacttctaaa ggtgaaattt taaaagaaaa tataaatttt gattatcgtt tttgtccttt
    12241 aaatatgcct tttttttggg ctgaatttaa attaaatttt ggttttgata cttttaagga
    12301 tgaagctttc aaaaatgcaa ggagaaatca acctagtgga gcaagttttg gctctatttt
    12361 taaaaatcca aaaagtgact tcgcaggacg ccttatcgaa gcggtgggac ttaaaggttt
    12421 tagtaaagga gatgctatgc taagtgataa acacgcaaat tttttaacca ataaaaaaaa
    12481 tgcaagcttt gaagatgcat tttttcttat cgaactggct agaaaaaaag tctttgaaga
    12541 atttggcata agcttagaaa atgaagtgat tattatctaa gtttacaaac tgtatctttg
    12601 acttaattta tggctaattt taattttttt atttcattat ctataacatc agataacatt
    12661 tttggcattt gatttacaat atcttgataa ttttgttttg catcttgagt ttttaatgta
    12721 aaatttaatt ctgcattttt tgccgcaaga atttctccat tgcttgtaga aataatttta
    12781 aaattaatat tagccacacc ctttttacta gttgtgataa agtaatttgt gatatttata
    12841 taaaaatctt gtaaatttac cactacaaca taatctgtaa atttagcata catcttagcc
    12901 ttatcctttt cttgtcttaa aaaaggactt acatttataa gttttgcatc cttagggcta
    12961 aaatatgata aagttttagg gctttgataa ataccatttg cagcagaatt aaccaaatta
    13021 agctttaaac tttgaatcaa atttttagca aataatgtag aaaattcttt atcactcact
    13081 ctaaaattat ctaaaacata accaaaattt ttcctaaaag ttagcactat agcaaaatca
    13141 atatccttat ctttgccaat ttgcgatttt ttttcaatca aagcggaact atcaaataat
    13201 gctttttgtt gatttagatt tggatttaca acattttgat ttagatctat tacttcaaaa
    13261 ttatctgcac ttttttcaat tttaataatt tttttctgag aaaaattatt tgctaaaaga
    13321 ttagaactta aaaataaact taaaaataaa gtgaaacaat acctcatctt gacccttata
    13381 aactacttaa aatatgaaat tatactctta ttttataaaa aatcttgtaa aaattcctta
    13441 gatgaaacac aaataaaaga gctggatcta taatttaaag ggtgatataa aatatatttt
    13501 ttagaaaaat cccccataaa ccccccattt tgattaacca aaaaatctcc tgctacaata
    13561 tcccaaatat taagcttttc aaacctctta taaactcctg ccttagcctc taaaatagcg
    13621 caaaatttta gtccagagcc tatattaata gcttctaatt gatgttcttt tgtaaaattt
    13681 tcatcttctt tgctaagatg attaacacta agcaaggctt tatatttatt tttctcatat
    13741 tcttgctgat caatttgtaa aattttatca tttttataaa ccttagtttt tgcatgagca
    13801 tagaatatgt caccttttga tggattttgt ataagtgata aaacaggacg attatcatga
    13861 atcaaactta tcataacgca aaattcatca ctacctttta aaaatccact tgttccatca
    13921 agaggatcaa taagccaaaa agtttttagc tctttgcatt cttctttatt gagtaatttt
    13981 tcttctgata aaattttaat atctgtagaa cctaaaatat catctagaat tttattagaa
    14041 gcaagatctg ctgatgtgag tgaactttta tcttcttttt cccaagtttt aaaatttccc
    14101 ctctctttta aaatagcttt ggaagcttta ttgctggcat ttatagcaat ttgtaaaaat
    14161 ttatcaagat taagcattat tataagactt tctataagaa ttttattaaa attatacaag
    14221 aagattttgt gaaaattaaa atttccacaa aaatttttaa ttaaatttta ctagtttcgc
    14281 ccaaataaag ttgtcttggg cgaactattt taagactttc ttgctctttt tgctctatcc
    14341 actgagctat ccagcctgga gtgcgtccta taacaaacaa agtagcaaac atttcatttg
    14401 gaatgcctaa agcttttaag ataagaccgc tatgaaaatc tacatttgga tacaaccctc
    14461 tttgaacaaa ataatcatca cttaaagcga tctcttctat acgcgttgcc accttgataa
    14521 gactggtatc aatatccaac tcatcaataa gttgatcacg aagtttttta agcacttttg
    14581 ccctaggatc aaaattttta taaaccctat gtccaaagcc catcaagcgg aaaggatcgt
    14641 ttttatcctt agctctttta ataaattcat ctactctatc aatactacct atttgttcaa
    14701 gcattctaat aacgccttca ttagctcctc catgtgcatg cccccaaagt gcaccaatgc
    14761 ctgctgctat acaagcataa ggatgagcat gggttgaacc tacagcacga accgttgaag
    14821 ttgaagcatt ttgctcatga tctgcatgaa gcataaaaac tgtatcaagc gcctttactt
    14881 ctataggctt aagttctaca tgattataag gataagttct tagcatatat aagaaatttt
    14941 ctgtaaaacc acgatctaaa tttggataag ccataggaaa accatgttta tatcgataag
    15001 cagtggccac tatagtagga atcttagcta ctactctagc tgccatttcc atatattctt
    15061 cttttacatt catatttaaa tgatcaggat aaaaagcact aagcgatgaa acagcacctt
    15121 gtaaaaccgc cataggatgg gcattatcag gaaaagaatc aaaaagacga tgcatacctt
    15181 catgaataaa agaacgcttt ttcatttcat aacgaaatgc ttcaagacgc atagcatctg
    15241 gtaactcttt ataaagcaaa agatggacca catctaaata aagtttattt tcagcaagcc
    15301 actctatagg ataaccacgg tgcattaaaa ttccgttttc tccatcaata taagtgattt
    15361 ttgatttgca agtagccgta gaagtcaagc cctcatcata agaaaacatt cctgtttgtt
    15421 tataaaagct tgacatatct acaacgcttg ggccagtttt accatcatat ataggaaatt
    15481 catagctttt tccatttcta ttatcaatta tagtaacgga atttgacatt ttcactcctt
    15541 ttattgttta cttttattaa ttctaacaaa aaagggcgat tatgagtttt ttattaataa
    15601 atttttaaga ttttatttgc ttttttgagt aaaaaagtaa ctttcatttc ttagaattag
    15661 aaagaaattt gatcatactc ataacaataa tagcctcaaa taaagccgtc aaaataagtg
    15721 ctgaataaag cttttcatca ataaccttac cagaatatcc caaagtggct gttgctataa
    15781 gtaaggtcaa aggtatagaa tgactaaggc caaataaaat catattttta aaaccgattt
    15841 ttttcaagaa aacacttgca cacaaaattc tcaaacccac cataacaaac ataagtaaga
    15901 acgcttgtaa aacaatttca taatctaaga tcattttaag atcaaaggtt gatcctatgt
    15961 gaatgaaaaa aatgggaatc aaaaatccat gcccaaaagt ggaaagctta tgttcaagat
    16021 cctttttatg atcaaaaaaa gttgctataa aagagcctgc tataaaagat cctagaacaa
    16081 tttcaagttt tgtaataacc atagcaacaa taattaatat aaaaattgcc atacaaaatc
    16141 ttatatcttt ttcattctta tcttcccatg gcataagcac aactttaagc tgcggatacc
    16201 accaaaaaag cacaccaagc attttaaatc caagcaaaca aagtcccaaa aagatattaa
    16261 gatacaaaat actttctgct acatcgataa tgcctgttcc ttcgcgtaaa aaagctcccg
    16321 ctatagtcaa aagtacgata gaagtcacct cagctaaagt ggctactatc atagcaatat
    16381 ttagccagta acattctttt ccaaaatcct taaaaagcaa agataaaagc cccacactca
    16441 tcacaggtat aatgataaca aatactaaag aaagtccaaa aatccatact ataaaagaag
    16501 ataaagcata aagtagaaaa atataaaaaa agcttttttt agcaatttct ttatccatat
    16561 taaaaaaagc tcttaaattt acctccatac ctgctataaa cataagatag taaaatccca
    16621 catttgctaa aagtgcaaaa ttttcacttt ttcctataaa accaaaatat gctattactg
    16681 ctcccaagat gatttcggta gccgaaagag gtaagcgtaa aatttttgca atatgcggag
    16741 aaaaaagtaa acataaagct ataacaataa gaatttttaa atcaattaaa ccttgcgaat
    16801 caataacact ctgatgcaaa agtaaatccc atttctttta attttactat atcttgactt
    16861 ggttcttcac ctttagtggt taaataatct cctatgacaa tagcacctgc acccgcttga
    16921 aaaatttcat actgtctttc ttgtaatacc acttcacgtc cccctgctat cattactacg
    16981 ctttgcggta aagcttcttt agtatcacgc acgattttta aagcttcatc agcactcaat
    17041 cttggaactt gtaattttaa attttcattc gcaataaaaa aattaatagg cgttgaaaaa
    17101 ggctgtaatt gctgcaaaga ttttctaaaa cttagcctat cttcctcgct ctcacccata
    17161 ccataaattc cgccacagca aagcataagt cctgcttctt tggcatttaa attggtttga
    17221 aatctacttt cccaagtatg tgtagtacaa atttgtggaa aaaactcttt agaagtttca
    17281 agattgtgat tataagaaaa aattcctgct tttttaagct ctttaagctg atccacactt
    17341 gccataccat tacaagcaat caaaagcaaa tttggcactt ctttttgcac tgctttagca
    17401 gcctcacaaa catattcaag tttttcatca tcaagcccaa gtcctgcggt aaccaaacaa
    17461 aaacctaaag cttcattttt ctttgctatt tttgcttcta aaacgatttg tgaaatttct
    17521 ttgcggcggt atttttgaat atctgttttt acatgtgcac tttgagtgca gtatttacag
    17581 tcttctgaac aatttccact tgctatattt gaaatagcac aaagcataat ttgcatttta
    17641 atcctttaat tcttttttga ttttacattt taagcattct aagaatgtgc cttttttaag
    17701 ctcttttatc actaaagttt cgccacattc ttcacatttt tcatcgcttg gtttgtattt
    17761 gcttataaaa ttgcattttg gataagcact acaaccataa aatttaccgc gttttgaaaa
    17821 gcgttctacg atttcgccct tttgacaact tggacaagca atacctgtac tatttacttt
    17881 agtttttacg gaagtatttt tgctttcgtt ttttaaattt cttgaatact tgcattttgg
    17941 gaaatttaaa catgctacaa attctccaaa acgacctttt ctaatagcaa gctctcctcc
    18001 acaatcagga caactttcac ctaactttgt tacagttttt tgactagcaa ttttagtttt
    18061 accttcttcg atttttctca taaaaggata gtaaaattct tttaaagttt cttgccaatc
    18121 cgccttatct tcagcgattt catctaaggt attttcaaga tttgaagtaa atttactatc
    18181 aactatatca cagaaatttt tttcaagcac ttcggttaca ttaaaagcta cttcactagg
    18241 aatgagttgt tttttgtcaa ttttcacata atcacggctt gtaagtatag aaatagtagg
    18301 cgcataagta gaaggacgac ctatacctaa gctttcaagt tttttaacaa gtcctgcttc
    18361 agaatacctt gaaggtggtt cagtaaagca tgagttcatc tctaaatttt gcacttttaa
    18421 gctttcgcct attttaagat gaggtaaaat tttatcctta tccatatcgc cataaacttt
    18481 ataatatccg tcaaaaagga tttttctacc acttatttta aatactgctc tatcattttt
    18541 tacaaataca ttttgggttt gagaaatagc aggatttatc tgacaagcta aaaagcgatt
    18601 ataaataaga gcgtaaagct ttagttcatc tttgtctaaa aattttgctg caatttctgg
    18661 agtgaaattt aaatttgtag ggcgtatagc ttcgtgagct tcttgtgcac ctttggcttt
    18721 tgtggtatat acatttgctt tgcttggaag gtagtctttg ccaaaattta tttgtataaa
    18781 ttttcttgca ttttctattg cttctttggc taaatttaaa ctatccgttc tcatgtaggt
    18841 aataaccccc atcacacctt catgagtatt tactccttca tagagttttt gagctaatat
    18901 catggttttt ttgggattaa agccaagacg attgcttgca ctttgttgta aggttgaagt
    18961 cataaaagga ggtggtggag cgatttttct ttccttactt tcaatatcag ttatattata
    19021 agtttcattt ttacaagctt ctaagataag tttagcacga tctttattag taatggtaag
    19081 tttttctatc ttagccttat caaactcaat aagttctgca tctaaatctt tttgaaaaat
    19141 catatctatg ctaaaatatt ctaatggtat aaaggcttga atttcttttt cacgatctac
    19201 tataatcttt aaagccgcac tttgaacacg tcctgcacta agacctcttt gaattttttg
    19261 tcctaataaa ggactaagtt tgtaacctac aatgcgatct aaaaggcgtc tagtttgctg
    19321 agcatttaca gagtgtatat ctagttttct tggatttttt aaagcatttt ctatggcact
    19381 tttagtgatc tcgtgaaaaa caatgcgtgg cagagtattt tcatctttgc ctatagcctt
    19441 tgcaatatga taagcaatag cttctccttc tctatcctca tcggttgcaa gatagacttc
    19501 ttttgcatct ttagctttgt ttttaagttc tttaactaag gcactatgat cacttgtaat
    19561 tctatactct ggaacaaatc catcatcttc tattttgatc ccaaaacttg atttaggtaa
    19621 atctctaata tgtcctttag aggcgataac ttcataatct tttcctaaaa aatttcctat
    19681 ggttttagcc ttggctggag attctactat gattaaattt ttcttcattt tacacccttg
    19741 tcaaataaaa aactgaattt agctaaaaat atttaaaatt ctacttataa aatatatttt
    19801 taactaagct caatattttt taaaaaaaca aaactatcat aataaaataa ataaaatata
    19861 atttgaagta attttaaata caaaccataa tttttggagt ataataaaat aaaaaggtaa
    19921 aaatcatgaa tggtaaaact tataaatttc accccaatga cacgaagatg gataaaaaaa
    19981 taattcaaat tactgaaaag tttggattta aagtggctgt gttttctatg gctgctatga
    20041 ctatgctagg aagcgtagta atttcatctg ccttgcctgc tattaataga cattttgaag
    20101 aacttttaac ccaaagtggt gccactcttt cttcaagttt tacgcttact catcttgata
    20161 tactcactcg cttagtttta accattcctg ctatttttgt cgtcatttta tctccatttg
    20221 ccggcatttt aatggataaa tttggaaaat taaaattcat tcttccagcc atgatagttt
    20281 ggactatttc tggggtaagt ggctttttct taaatgatat ttatgatata ctgacttcaa
    20341 gagctatttt tggcatggca actgctttta taatgacagg tgcttcagct ttacttgggg
    20401 actattatag tcgtggtggc tttaatcgca gagaaaatgc tttaagcctt caaggatttt
    20461 tttgtgcagt aggtggtgct gtttttattt ctatcgcagg ttttgtttca agttattctt
    20521 ggcgttatcc ttttttagta tatggacttg gaattttaat taccttaatg gctatcattt
    20581 atctttttga acctagaaaa tttaaatttg ataatcacat aaaaatagaa gcaaaaacaa
    20641 attattggca atttttccct atttatttta taggtttttt tatcatggtg gtttattata
    20701 tatctcctac tcaactacct tattatatag aagaacactt aggactagat cctaagtata
    20761 taggtatttc aatgtctata tctgcgctat gttatggttt tttctctcta ggctataaat
    20821 atattataaa attcttgagt attaaaatta tctatgtttt aactcttttt attgtctctt
    20881 gttctttttt gctgcttttt ttagtggata atttttttgc cgttttaatg gctttagctt
    20941 tacttggaat gggtggaggt attatgcttg taaacaacac ggcttatctt ttttcaattt
    21001 gtcctgaaaa tgctcgtgct agagcttgtg gaattttagc aagttgtata tttttaggac
    21061 aattcttaag ccctattatc tctcaaccta tcgttagaca aataggtctt gtagatgctt
    21121 ttttgatatg ggctattgtt atttttatag tttgtatagt gtttttattt ttaaaacaaa
    21181 agactagggt taattaatct tccaaccatc acatctgttt ccaatccgtt actcacaaag
    21241 aaattggcaa aattttaggt tttgatgttt ttggaatttt aaaaataggt gattgtatta
    21301 gtgatatgga atccgcacta aaagctcata aaaaataaat aatttccaag tagaaaaaat
    21361 ctattttcta cttggattat tttaatatca caaacctact gcacttaaag tttggtattt
    21421 actcatataa agttgagctt caatttttct catcgtatca agtgctactt gaactacgat
    21481 aagtacagaa gtgccaccaa aatgaaaagg cacacccata aatttcacca aaacccaagg
    21541 caaggttgca acaaggccta aataaataga acctgataaa gttaaacgag aagctacttc
    21601 gttaagataa ttagaagttc cttcacctgg acgaattcca gggataaaac ccccttgttt
    21661 tttcaaattt tctgctatat ctttagcatt aaatacaata gaagcataaa aataagcaaa
    21721 gaaaattaca aataagaaag ttaaaacatg aaacaaataa ccatttggat ttaaaaagtc
    21781 attaatggct tggaaataag ggtttgtgct tgtttgcaaa attgttgttg gaaacattaa
    21841 aattgcacta gcaaaaatcg gaggaataac cccactaagg tttaatttaa taggaatata
    21901 attcataatg cgcttgtttt gattttccat tacaacttta cgagaataag aaataggaat
    21961 tcttctttct ccaagttcta cataaataat cacacctata gtgattaaaa tcaaagcaaa
    22021 aatcgcaaaa gcggttaaga aattcatctc ccctgaattg atttgtccta cagttcctga
    22081 aattgctctt ggaatttctg aaacaatacc tgcaaaaata attaaagaaa taccatttcc
    22141 tacacctttt tgtgtgattt gttcgccaag ccacattaaa agcatagttc ctgcaagcat
    22201 agaaatagca caaagtgtaa taaacatatt taaatcttct atcattatag cccctgcacc
    22261 gcctctacta tgcaagcttt gtaaacctat agcaacacct atgctttgaa ctaaagtaat
    22321 ggcgatagtc gcatagcgaa taatttgcat atatttttgc atactatcac gctctttttt
    22381 catcttaccg atatttggaa aagttgctgc aagaagctcc ataataatag aagcagtaat
    22441 ataaggcata atacctaaag aaataataga aaagcgttca gctgctccac cactaaaaac
    22501 attaaataaa cccaaagcat tgttttgatt gttattaaaa aattccgcaa tcacatcagc
    22561 attgacgcca ggaactggga cataagccag aaccctataa gcaaacaaaa atgctaaggt
    22621 gattaaaatc ttattcgtca atgctctatt cattattttg atccggtgac gctaatgttc
    22681 tcgtctttga tttttgatac taagcctttt gcgcttacac caattagttt gattttattc
    22741 acggattttg aaattttatg aacactttta atgctctcaa gtgtaatttc gctaagctct
    22801 tttacagctg tgattttttc aacattgatc acataaggtt tttgaatttt agaagcaaaa
    22861 cctacttttg gtaatcttct ttgaagtggt tgttgaccac cttcaaaacc tcttttttca
    22921 ttataacctt ttctagcagt ttgacctttg ccgcctttgg tagcagtctt acccatgcca
    22981 gaaccttgac cacggccaat tcttttagtt ttatgcgttg aacccgctgc ttttgttaaa
    23041 ttcatcttct tatcctttta acattgttaa agctttgatt gtagcacgaa ccacattagc
    23101 tgaattattt gaacccaaag acttagttaa aatatcttta atgcctgcaa gttctacaat
    23161 aggacgtgta gaaccacctg caataactcc tgtaccttca ctagctggtt taagtaaaat
    23221 tctacttgca ttgtatttta cttctacatc gtgagcaata gtcgagcctt tagttttaac
    23281 ttcaacgata tttttaaacg catcatcaac agctttgcgg atagcatctg gaacttcctt
    23341 agctttacca taaccaacgc ctactaaacc tttgcggttt ccaacgataa ctaaagcagt
    23401 aaatctaaat cttctaccac ctttaacaac cttagtaact ctgccgatat caactattac
    23461 ttcttcaaat tcttctctat tatatttttc catcgattta ccccttatag cctaatgcca
    23521 ttttctctta aagattcagc taatgctgcg ataacaccat gatatacata accatttcta
    23581 tcaaaaacag cttgttcaat ttttttagct tttaaagttt tagcaaattc agcagcgatt
    23641 tttttagcac cttctttatt tgccttaacg ccaagtttgc gtccatcaac tgctgctaaa
    23701 gttacagctt ttacatcgtc aatcgcttgg atatatagag ttctgtttga tttaaataca
    23761 gaaattcttg gaaaattttc acaacccgaa attttcgctc taattctttt ttttcttttg
    23821 attcttaaag ttagttttct ttttaataca tttgctctca tattctaccc ttacttctta
    23881 gatgtcttac cagctttgcg gataatgcgc tcatcagaat atttaacgcc ttttcctttg
    23941 tatggttctg gtggtctaaa ttcacgaatt tgagcagcaa cttgacctac aacttgttta
    24001 tcacttcctt taactgcaat agtattttta tctactacaa tttcaattcc ttctggaata
    24061 tcatagttaa taggatgaga aaaaccaagg cttagttcta aaactttacc ttttaaagct
    24121 gctttataac caactccgtt gatttcaaga gttttagaaa aaccttgagt taaacctaca
    24181 acgatattgt aagctaaagc tctataagtt ccccaataag ctctactttg tctgtcttca
    24241 ccttttggag aaaaaagaat attgttatct ttaatctcaa tatttacatt tgccttagta
    24301 tcaagttctt ttgctaaatt tcctttttta aatttaagca aattcccttc taattttact
    24361 tctactcctg atggaatagc aattggttgt ttacctatac gagacatatt tttccttttt
    24421 atttgtctag gatatttcta cttttttaaa agaatggata cccaatgcca taaaaagcag
    24481 attcttacca aatggtacat aaaatttcgc caccaacacc tgctttataa gcttcgtcat
    24541 tagctaaaac accatgactt gtgctgacta cgatagtacc ataaccattt ttaaaacgct
    24601 tgatttcatc tttaccttta taaacacgac gaccaggttt agaaattctt ttaagctcat
    24661 tgataacact cttacctttt tcatcgtatt ttaaaactac attgataaat ttctttttat
    24721 cctcttcaat aacattaaaa ctttcaatat agcctttagc ttgaaaaatt ccaactaaag
    24781 cttctacaac tttagaatgt aaaagcttgg ttgtttcaag ctttctcatt cctgcatttc
    24841 tgatgcgagt gagtgaatct gaaataatat catttatcat attttatcct taccaacttg
    24901 cttttttaag acctggaatc aaaccttcgt tgcccatttt tcttaagcaa actctacaaa
    24961 ttccaaaatc tctataaacc gaatgcggac gcccacaaat ttggcatctt gtatagcctc
    25021 taactttaaa tttaggcttg cgtgccgctt ttgcaatcat tgatttttta gccatcttac
    25081 tttccttttg taaatggcac accgataagt tctaataact tttgtgcctg tttgtcattt
    25141 tgtgctgttg taactataga aatgttcata ccgtgagttc ttaaaatttt atcatactca
    25201 acctctggga acatcaactg ttcatcaaga ccaaaattat aatttccacg cccatcaaaa
    25261 ccatctctat ttaaacctct aaagtctttt actcttggca aagcaataga aattaattta
    25321 tcaagaaaag catacatatt ttcttttctt aaagttacca ttacacctac aggaaaacct
    25381 tcacgaactt taaatcctgc aactgatttt ttagctttag taatcacagc tttttgtcct
    25441 gcaactaaag aaatagtatc tgctacattt tgcaatactt tttgatcttt agctaactca
    25501 ccagcaccca cactgataac tactttttcg atcacaggga taagcatagg atttttaata
    25561 tcaaattctt taaccaatgc aggcttaatg ctttgattat atttttcttt caatctcatc
    25621 attgcttact cctgaacttt tgccacattg gaaatatcca tcggcatttc tttattaata
    25681 aaaccaccat ttgggttttt ttcgctaggc ttaatagctt ttttagaaat tttacatccc
    25741 tgaacaacca ctttaagggt ttttggatat accgctaaaa ctttacctat tttaccttta
    25801 tcatcacctg tgataatttt aacactatca ccttttttaa tctttaattt aactgccatt
    25861 ataatacctc cggtgctagt gaaacgattt tcataaagcc accatatcta acttctctac
    25921 ccactggccc aaagatacga gttccgatag gctctctttt gttatcaaga ataactgcag
    25981 cattttcatc aaaacgaatt aaagaaccat tatctctatg aatttctttt ttagttctaa
    26041 cgataactgc ttttactact tgaccttttt taacttttcc gtttggtaaa gcttttttaa
    26101 cagatgcaac gattacatca cctacagtag catatcttct tttactacca cctaaaacct
    26161 tgatacacat taattctttt gcaccactat tatcagcaac tgcaagtcta gtaaaacttt
    26221 gaatcattac tcaactcctg tagctaatac agattttaag cgaaatgatt ttctttttga
    26281 aagcggtctg cactctactg caacaacagt atcgcccact ttaacttcat ttctctcatc
    26341 atgaattaga tattttttaa agcgtttaac aatttttctg tatcttggat gaactacttt
    26401 tctttcaacc aaaacacttg cggttttttc accagcgatt ttaacaacaa cgccttgaat
    26461 ttctctttta aatgccattt ttcatcctta tcttaaagcg ttaattgctg tacttattct
    26521 agcaatatct ttttttactt ggctaatctc ttttggatta gtaagttgca ttgtttttag
    26581 cttttgtttt aaagtgaata aaagcacctt tttttctttt agcattgttg caagctcagc
    26641 tgctgtttta tctttaattt cagtatattt cattttggct ctctcttgta acaaacttag
    26701 ttttaaatgg aagtttatgc atagctaaag tcaatgcctg tcttgccatt tcttcgctta
    26761 ctcctgccat ttcataaata atacgacctg gcttgatatt cattacccat tcctcaacag
    26821 cacccttacc tttacccata cgagtttcta aaggtttttt tgtcaaaggc ttatctggga
    26881 aaactctaat ccaagttttt ccttgtcttt taacaaaacg agtcaaagcg atacgcgctg
    26941 cttcaatttg gcgtgagtta atgcgtcctg cttcagttgc tttcaatgca aattcaccaa
    27001 aagtaaattc tgttccacga ttagcataac ccctgttacg tcctttcatc attttgcgat
    27061 atttagttct ttttggtatt aacatgatta tttacccctt cttgtacgtc ttggcttttt
    27121 agctggagta ctttcttcag ttttttcagg ttgcatacct ttgtgtaata cttcaccttt
    27181 gaagatccat actttaaccc ctatatttcc ataagtagtt ctagcttctg caaaaccata
    27241 atcaattttt gctcttaaag tatgaagtgg aacgcgtcct tcaagatacc attctgttct
    27301 tgccatttca gcaccaccta aacgaccaga aactgaaact ttaatccctt tagcacctgc
    27361 tttttgcgcg ccttgaatta cttttttcat tgctcttcta aaagcaattc ttttttcaag
    27421 ttgggttgca acactttcag cagcaagttg agctgaagcc cctgcttttc tttcttcttt
    27481 gatattgata tttacatctt tgctgattaa atcttgtaat tcttttctta aattatcaac
    27541 atcactacct tttttaccga tgataattcc cggtcttgca gcaactacag taacacgaag
    27601 ttttttagca gttctttcta ctaaaatttg actgattcct gcataataaa gttttctttt
    27661 taagaaagct ctgattttgt aatcttcacc gatattttct actaaatttg ctttagttgg
    27721 aaaccatctt gattcccagt ttctattgat tcctagtctt agaccaattg gattaacttt
    27781 ttgtcccatt agctttcctt tttcgctgtt gcttttttag tgcttgttat ttttttaact
    27841 ggagcttttt tagctactgt ttttttctct tcagctttca cttccgcttt tgccacttct
    27901 actaaaatat gtgaagttgg ttttctaata cgacttgcac ttcctctagc tcttggtcta
    27961 aatcttttta acacagcagc tgcatcaaca cgacaacttt ttacaatcac ttcatttgct
    28021 tcaaagccac catttgctac tgcacttgaa attgcatttg caatgtattt tgcaccctta
    28081 tttggcataa attttaaact agccatagct aattctgcat tcatcccctg aacttctcta
    28141 gcaatcaatc ttgctttagt tggagataat cttatgaatt taattaatgc tttactcata
    28201 tcttatccct tacttaccaa ttttcttttg cacagagccc ttatgccctt tgaatgttcg
    28261 tgttggagca aattcaccaa gcttataacc aatgtgattt tcagtgatat aaaccggaat
    28321 gaagctttta ccattatgaa cattaaatgt aagtcctatc atatcgggag taattgtgct
    28381 tcttcttgac caagttttaa ttggtttatt atcattagcc tttttagcag cgatgacttt
    28441 tttcattaca tgatcatcaa caaaaggacc tttttttagt gatctagcca tcttactttc
    28501 cttttcttct tgaaattatt agcttatcgc tagctttttt acgacgagtt ttcgcacctt
    28561 tagttggttt accccatgga gttactggat gacgtcctga atttttctta ccttcgcccc
    28621 caccgtgcgg gtgatctact gggttcatcg cagaaccacg agtttgtggt cggatacctc
    28681 tatgacgatt tctacctgct ttaccgatgg ttacgttagc ccattcttca ttgcctactt
    28741 caccgatact tgccatacat tcagctaaaa cttgtctcat ttcgccactt gcaagtctta
    28801 agataacgta tttttcttct ttgcccataa gttgtgcgta agcacctgcg gaacggatca
    28861 tttgaccacc tttgcctggt tttaactcaa cattatgaac gatggtaccc acaggaatgt
    28921 ttttaagttt cattgcatta cctggtttaa tatcaagtcc gccttcagca gctgcaacga
    28981 tatcaccaac acttaatccg cgtggttgaa gaatgtatct tttttcgcca tctttataag
    29041 taatcaaagc aattctacaa tttctgtatg gatcatactc aatcgcttct actttacctt
    29101 ctataccaaa tttacgacgt ttaaaatcaa taattctgta aagtttttta gcacctgctt
    29161 ctttatgacg acttgtaatt cttccataac tattgcgacc tgcatgtgct ggaagtttaa
    29221 caagtagtga gcgaacactt ggtttagctg taatatcttc agaacttaaa cctgtgatat
    29281 atcttctact tggagtatat ggtttataag ttttaattgc catcttaagc ctccgtattt
    29341 tctaagctaa caccttcagg cagcttaaca tagaattttt tataatcgtt tctttgaccc
    29401 aaacgacccc taaaacgttt aacttttcca tccattctca aagaattgat actttttgga
    29461 gttacaccaa aatactcttt taaaaccgct tttaagcctg ttttagtcat ttttggtgaa
    29521 gtttgaataa ctacgacacc ttgctcttgc aaatttaaac ttttttctgt gtaaagtata
    29581 gtctttatat cagtaatatc tgccataatt atccctcttt tgtaatagat tctaacgctg
    29641 atttttccat aataacagca ttaaatacag atactaaata agcatttact tcagttacat
    29701 caactacata gcaatttgct aaatttctgt aagctaaaag cgttttttca tctagtaaat
    29761 ctttaacgat caaagcatct ttaatgccaa gttttttaat cacagcgttt gcatctttag
    29821 ttttaccact ttcaatagct aaagaatccg cagtgaataa tgcaccctta actcctttat
    29881 ctgctaaagc tctttcaaga gccaatcttt tttgtttttt atttactttt tggaagtagt
    29941 ttctttcatt tgttggacca aaagcaaccg caccacctac ccaaacgtta gttctagttg
    30001 aacccgctct agcaccgcca cgaccttttt gtctccaagg ttttttacca ccaccactta
    30061 catcacttct acctttagta tgagctgtat ttgctcttaa acttgcaagg caagatttta
    30121 catataagta aagattgtgt ggatttactt ccgcatattt tgaaggtaaa tcaagttcac
    30181 ctgctttttc taatttatca tttaaaacaa ctactttact cattttgcaa tccttatttt
    30241 acccatagca ccattataac ctggcactgc acctttaact actaaaattt tgttttcggc
    30301 atcataagat acaacttcat ttttaacggt tactttagta tttccataat gtcctgccat
    30361 tttcatgcct ggttgaacac gacctggcca ttctctatta ccaatagatc cgtgacgtct
    30421 atgaaatctt gaaccgtgac ttgctggacc ccctgagaag ttatgtcttt tcataacacc
    30481 gctataacct ctacctttag tgttaaaact tacttttaaa atttttgctt catttaatgg
    30541 agtttcatct aaatctccta cttcagtatt tactacttct aaagtcgcaa atctattata
    30601 ttctgcagaa agattatatt ttttttgctg ccctgcaaca catttattac ttgctttacc
    30661 ttttggatat gctactaaag cctttccgcc ttcaacttca catactttta catttacaat
    30721 tcttagtaaa gttacagcga tacttggatt agtaattgtt ctgctcattc cgattttttc
    30781 tacaatatat tccatatctt atccttactt acccatagct cttacttcaa cgcttacttc
    30841 tggcgctaaa tcaagcttag ttaaagaatc aactgtatcc ggagtcgctg ctacgatatc
    30901 tagcatacgc gcgtgaattc ttatttcaaa ctgctcacga gaatctttgt taatgtgtgg
    30961 agattttaaa actgtatagc gtttgatttt agtaggcatt ggtatcggac ctctgatatc
    31021 cgcacctgtt cttttaacag cttctacgat tgctgcaact gttctgtcta gtactcgatg
    31081 gtcataagct tttagcttaa gcctaattct ttccataata tttcctttaa aaagaactcg
    31141 ttagttaaaa actaaccaaa aatttataaa aactgaaatg agagtatata aaatcttgtt
    31201 ttcaaagtca aggaatttga tgaaattttt atatttttat ccttttaaaa aggataaaaa
    31261 tataaaaatt taaaacttaa aaaaatgctt tatctaaaaa atattattaa tttttcatgt
    31321 tcaatcaata tcttatttca ttaaatttta aaaaatctct taatttttca tattcgccat
    31381 tttctaaata gcgatgtttt cccggcttta acataccaag atctaagact ccaaaagcaa
    31441 cacgcttaag atccattact tcaacatcaa aatgtccaaa aaagcgtcta agttctctat
    31501 ttttaccctc atttataatc actctaagtt tagtataacc tccacttgat ccaaaaattt
    31561 caaagcctat aaaaggagca aaactcatag aagtgatttt agtttttgcg tgtgcacctt
    31621 ttttttcgtt tttaatctca agcccatttt gcattgcttc gatgacttgt ttagtaacta
    31681 tgcctttaac tttaagataa tattctcttt ctaaatcact atgcattaaa gcatcagcaa
    31741 ttacaggtga atctgtaagc aaaagcaaac cttcgctcgc ataatcaagt ctacccacgc
    31801 taagccaagt gctaaattgt tttggtaagg tgtcatatat ggtttttctt ccacgatcgt
    31861 cttttttgct gacaatttca cctttttgtt tatgataaat aatcacgcta aattgcgttt
    31921 ttttttgcac tcttttaccc ttaataaaga ttttatcatc aaatttgact tcatcgctta
    31981 aaagagctat tttattgttt atttttacca aaccttgttt gataagttca tcagcttcac
    32041 ggcgtgaata acgcgtattg tgggatacaa atttattaat tctcacttga tcttccttaa
    32101 aaagggcgtt gtttgccctt ttttacatca caaaaatagt tggaactatg gtagggtatt
    32161 ttttaatctt tctaaatata tgttttctta agacttgacg aatttgattt tctaaaaatc
    32221 ttggatcatt aagtacttca tctttaacat tgataaaaaa ttgccccaaa acttcagcca
    32281 tatctttgct aaaagcatga tcgtgtttat ctgctacaag cccatagcta aatacccttg
    32341 gcttgttaat gagagtcttt gtagctttat caatttgtgc aatgataaca actataccac
    32401 tatctgcaag tttttgacga tctataacta catcatcagc gatttgttta ttgatttgat
    32461 tatctacaaa aactttacct gtttttacgg tttttacgcg tttgacatat ttttggcaaa
    32521 gttctacttg atcaccatcg ctcataagat agatatttct ttcaggaata ccgcatttca
    32581 tcgctgtttc tttgtgcttg gtgatatgat tatattcccc atgaacaggt aagaaaaatt
    32641 taggtttagt aagagttagc ataagctttt gctcttctat gcttgcgtgt ccacttacat
    32701 gaatttcact aaattcttga tacgctactt tagctcccgc ttttaagaga taatcaagca
    32761 cagcagaaac gcttgcttca ttccctggta tagccttagc tgaaataatc acttgatctg
    32821 tgggttttat ctttataaat ttatgttcat cggttgccat tctataaagt gcgctcatag
    32881 tttcgccttg actgcctgta gttacgataa gaacctcatt gtccttgtat ttacttacct
    32941 catcagcatc aatgaaaatt tttctatcaa gtttgatata gcctaactcc atagtagtat
    33001 agagatttct ttccatggaa cgaccgataa cgcaaacttt tctgccatat tttaaaccat
    33061 aagtgatagc ttgataaaca cggtgaatat tagaactaaa agtactcatg atcaccctac
    33121 ccttagtgcg tgcaaagatt tgatcaaaag ttggtcctac agaactttca ctttttgtat
    33181 agccttcttt gtaagaattt gtactatcac ttaaaagaca taaaacccct tcttctccat
    33241 aatgtgccaa acgccctaaa tctgttggat aaccatcaat tggagtttga tcgattttga
    33301 aatcacctgt atgaatgata gttcctgctt ttgttttgat tgcaagtgcc gaagcatcga
    33361 tgatagaatg cgtgatgtga atccattcta tatcaaattc gccaatttca taaacacggc
    33421 gtttttctac agggcgaaac catttgcgtt ctgcttttaa accatgttct tcaaatttgt
    33481 ttgaaatcat tcctaaagct aaaggtgtgg cgtaaatagg aaattgaaat tctttaaaga
    33541 aataaggcac tgcaccaata tgatcttcat gcgcgtgagt gatcactata ccacgaattt
    33601 tatcttttat ttttctcaca taatcaaagt cagggataat aatatccacc ccatgcatgg
    33661 ttccatccgg aaagctcatg cctatatcta ctataattgc gtctttattg gtttcaaaaa
    33721 cgctgatatt tccaccaatt tcccctaaac ctcctaaagg agtgatgcga attttatgct
    33781 cgctagaatt attatatttt aaagggtgta agcggttttc atgcgaaaca cgatttgctt
    33841 ctatacactc tgcaagagcg atttgccaat cttcattgcc tgtgagcttt aaaggcagat
    33901 tacgattttt tttcttcttt ttctcggttt tgttttctgg gttttgagca ttttctttgt
    33961 tagaattttg attgcttgtt gcagtattgt tttcattttg taaagaattg accaattttt
    34021 ttatacgatt tttgtattta tagcgtttat tattttttga atttgagttt ggattttgtt
    34081 cgttattgtt aatttctttg ttttcgtcca tattcatcct ttaatttatc ataaatttta
    34141 agatatgaat caacgcaaat ttcatgtggc ctgatgtttt cttttaagcc aagaatgctt
    34201 aaaacttcta aaactttcgc tttgtgtgtt tttaaatttc ctaaaagttg cttcctagga
    34261 gctttaaaac agtcttttag aaaatttttg aaattttcta tctcacaaag ctcatcaaaa
    34321 tccttgattt taatcaaact tatcaccgtt gacataactt ttggcggtgg attaaaacac
    34381 tgcggattaa catcaaaaag tatttttctt tcgcaaatca ttgcacttaa aattcccaaa
    34441 gaagaaaatt cactatttcc ttctttagcg caaaattttt cagccatttc tttttgcacc
    34501 attacaataa gccctaaaca gtttttatct tccaaggcct taagtataat gtgactcgca
    34561 acataataag gcaaatttgc aaccaaaaaa tatggttttt catcaagact tggactaaaa
    34621 gcctcgcttg cattttgatg aatcaagtta aattttccac attcaagttc tttttgaaat
    34681 ttctttttta aaataggtat gagatcatta tcgatttcat aagcttttac ttgagaaatt
    34741 tttaaaagat cttgcgttaa atcacctaag ccaggcccaa tctcaatgat attatccatt
    34801 tctttgggta tggcttggat gatttttgct aatacgcttt tatcaattaa aaaattttgt
    34861 ccgtattgtt tttttgcttt aaccataaaa aataatttta tctaaaaatt cttaattaag
    34921 tctttttagg tagaattatt tttgtaaaat tttataagga taaaaatgat tgtttgtgca
    34981 ggtggaaatg aaaatttttc ttttgcaaaa gccataggca taggtttagt agaatctgct
    35041 tttcatttaa gccaactttg cttaaaagaa aagccatcaa aactcatatt tataggaact
    35101 tgtgggcttt atgataaagg agaaatttta gaaatttata aaagttctca cgcttttaat
    35161 atagaatttt ctaaaatttc atatgctttt tatactcctg cgaaagatga aatttgccta
    35221 gaaaaagaaa atgtttctcg tgaaacaatc aaaatcaatt cttctaatta tatttgtcaa
    35281 aattcaaaag cagcaaaaga atttgctaaa ttaggttttt ttgcagaaaa tatggaagct
    35341 ttttctgttt taagtgtagc taaaaatttt ggtatttatg cagaatgtat cttatgtgct
    35401 acaaattttt gcaatgaaaa tgctcatgaa gattttataa aaaaccatca aaaggcgaaa
    35461 gaaaaattag aagaatattt aaaaaaatat cattatattt aaaaatttaa aagggaaata
    35521 gttttgaaag agcttgttaa tattttagat tttttacctg aagaattagg agaaaaaatc
    35581 aaacctatgt ttcgcgtgaa acaaatttat caatggatct atcaaaaata tgccaacaat
    35641 ttttctgata tgtcaagttt gccaaaggat ttgcgtttag aactcgcaca aaattttcat
    35701 ttttctcctg taaaatgtgt taaaaatgaa caaagtaaag atagaagtat aaaatacctt
    35761 tttgagctca ttgatggttt aagggtagaa agtgtacttt tacctatgaa agaagaaaaa
    35821 atagacgaaa agggtaaaag aatttctcat gcacgatata ctatctgtgt ttcttcgcaa
    35881 gtaggttgta aaagtagctg tagtttttgt cttactgcta agggtggttt gaaaagaaat
    35941 ttaagtgcag gagagatagt tggacaaatt ttatggatca aaaaacaaaa caatatccct
    36001 tatgaacgcc gtgtaaatat agtatatatg ggcatgggtg agcctttgga taatcttaaa
    36061 aatgtctcta aagcagtaaa aattttagca caaaatgacg ggcttgctat aagtcctcgt
    36121 cgtcaaacca taagcactag tggtttagca aaacaaatca aagaattagg tcaaatgaat
    36181 ttaggcattt tgcttgctat atcattacac gcagttaatg atgagcttcg cactgaactt
    36241 atgcctatta ataaagctta taatatcgct gcgatcatgg acgccgtgcg tgaatttcct
    36301 atagttcaaa gaaaaagggt aatgtttgaa tatcttttga ttgatggtat taatgataaa
    36361 cttgagcacg ctaaagaatt ggttaaactt ttaaatggta ttaaagctaa agtgaattta
    36421 atactcttta atccacacga aggaagtata tataaacgcc ctagtttaga aaatgctata
    36481 aaatttcaag atttgctaag tagtaaaggt gtaacttgta ctataagaga aagcaaaggg
    36541 cttgatatct cagctgcttg cggacagctt aaagaaaggg tgaaagaaca atgacaatgt
    36601 tagatatttt tgaaatcatt tttataacag ctgttgtggt tataggtttt ggcggaattg
    36661 tttttgtact aatgaaagaa aaaaaataaa taccatactt atggtgtcaa gggggagact
    36721 tgaactcccg acctccggct tatgagacca gcgctctaac cagctgagct accctgacta
    36781 aaaataaaaa tataattata ctacttttta ctaaaaattt tctgattttt aaaaaataat
    36841 tttattttca atatttaaaa attttcttta ttttaaagct tttatggata taataaaggc
    36901 tttatttaag acaggtgtcc gagcggttga aggagcacgc ctggaacgcg tgtaaagtgt
    36961 aagctttcga gggttcgaat cccttcctgt ctgccattct tatttttaat attcaaaata
    37021 ttattgtttt gccaaaagtt attttattat ttataaattc ttaaattttt tgataaaata
    37081 ttaaaaaatt ttatttattt aggttttata atgctacaat caagactttt aatgaattta
    37141 aaaggaatag gaatatcttt tataccaaga tatttttttc aaataaattt agataaaatt
    37201 tttaatgata ttttaaaata caatattaaa gacttagaag aaatacaaac tagagttaaa
    37261 tattataata aaataaatga atttttcaca cctacagaaa aagaaaaaat aggaaaattt
    37321 ccttttaaag acacttctta tgcttttgat gcttatgaaa tcagtaaata ctttaaagat
    37381 gaatttttat ggaataaaga atttggtgat ataagacata cttttaaaga agcaactatt
    37441 tgcaaatcaa gatccttgga aaataatata aataatattt tattaaaact tgataaaaat
    37501 aggcactttt gttttttaaa agataacata aactacgaaa ataaaaagga tatagcaata
    37561 tttagaggag cagtatatca aaaacataga aaagaatttt ttgattctta ttttggtaaa
    37621 acattttgcg atataggaga tacttcaaaa caacctagcc aatggaaaaa aaacttttta
    37681 aataaaaaag aacaaatgaa atataaattt ataatttctt tagagggcaa cgatgtagca
    37741 agcaacttaa aatgggctat gaattccaat tctttagttt tagttccaaa aataacttgc
    37801 gaaacttggt ttatggaagg aactttaaag ccaaattatc actttgcttt cattgataat
    37861 gagaatttgc caacagtaat tgaatatttt aaagctcacc caaaagatgc attagaaatt
    37921 attaataatg cccatcaata tattaagaaa tttttagata agaaaaaaga atttcatata
    37981 ggaattttgg ttttgaccaa atatttttat tattctaaac agcttgaact tagcaaaaaa
    38041 agagatattt tagaattaat taaatagtaa aattactcta attaattctc taatttttca
    38101 taaaataaat ctttttatac atacattaca tcataaatta caaatttgac tttagttttc
    38161 agccaaaaaa aagtaatatt gcgataaaat cttggattta taaggggcat tagctcagct
    38221 gggagagcac aacgctggca gcgttggggt cagcggttcg aacccgctat gctccaccat
    38281 atggttccgt agctcagctg gtagagcact accttgacat ggtagtggcc gttggttcaa
    38341 gtccaatcgg agccaccatc actcttcctt acacaaagga tcatcatgca aaatacaatc
    38401 atacaaaaag ctatccatga agatttaaat tctatacttg caatcacaaa agatgcatta
    38461 aatgctatga aagctatgaa ttttcaccaa tgggatgaaa attatcccaa taaagtagtt
    38521 tttcaagaaa atatacaaac acaagaactt tatgttttta aagaaaatga tgaaatttta
    38581 ggatttatct gtatcaatga aaaatttgaa cctaaatttt atgaacaaat cacttttaac
    38641 aaaaattatg acgataaagc cttttatttg caccgtttag ctgttaagca aagcgcgaaa
    38701 ggtaaaggtg tggcacaaaa acttttaaat ttttgtgaaa attttgcctt ggaaaatcac
    38761 aaggcaagtt taagagcaga tactcacagt aaaaattttc ccatgaattc gctttttaaa
    38821 aagttagatt ttaaattttg tggaaacttt gatataccta attaccaaga tcctttttta
    38881 gcttatgaaa aaattttaaa ccaaaaagct ttttgagttt ttttcataag ttttgatttg
    38941 tgattcatgc tttaaggtta aagctatatt atcaagccct tctaaaagac aagttctgtg
    39001 aaattcgtct aaatcaaaag aaaaaatctt atctttaaaa aatactcttt tttccaacaa
    39061 agaaatttct atgtttttat cttgagattt ttttaattct tcaactatct ctaaaacctc
    39121 atctttacct agttctatag taagtaaacc atttcctaag gcattatttt taaaaatatc
    39181 tgcaaaagaa ggtgcgataa tagctctaat accataatca accaaagccc aaggcgcatg
    39241 ctctcttgaa gaaccactgc cgaaattttc aaaactcact aaaatagaac tattttgata
    39301 ttctttttta ttgagattaa aatccatatt taaaacactt tctttatcat ctaaataacg
    39361 taaatcatga aataaatgct taccaaaacc ctgctttgaa actgctagta gaaattgctt
    39421 agggataatt tgatctgtgt ctatatttgc atattctaaa ggacaagcta tgcctttgtg
    39481 tataataaat ttttgcatgt taaactccta aatactttct attgtcacaa ataatacctt
    39541 ctatcgcaca agcagccgca cttgcagggc tcattaaatg ggtaatagaa cctttacctt
    39601 gcctgcctat aaagttgcga tttgaagttg aagcgaccct ttgacctgaa tttgctttat
    39661 catcattcat accaagacac atagaacacc ctgcatatct ccactcgcat cctgcttgta
    39721 taaaaatttg atcaagccct aaattttcag cttcttttct tacttgcatt gaaccgggta
    39781 cgattaaaac tttaacattt tcatgaattt tgcgcccttt taagatatca gcggctattt
    39841 taagatcttc taagcgccca tttgtacaag atcctataaa tacaatatcg atttttactc
    39901 cttctaaagc ttgatcttgc tctaaattta cataatttaa agcatcaagc aaagatttct
    39961 gctcgctttg atttttaaaa tcacttattt ttggaatttt ttcatctatg gcaatcactt
    40021 gcgaagggtt tgttccataa ctaatttgtg gttttatatt acttacatct aaaataatgc
    40081 tttcgtcata ttttgcccct tcatcacttc ttaagcttct ccaatactca caatactttt
    40141 gaaattcttc ccctttaggc gcaaattctt tatcttttat atactcaaaa gtgatctcat
    40201 caggagctat catacctact ttagctccaa attctatagc catattacaa agagtcattc
    40261 tagcttccat gcttaaattt cttatgagtt ctccacaaaa ttctatagca taacctgttc
    40321 cttttgctgt accgtattgt gcgattaaat acaaaatcaa atctttagca taaacgcctt
    40381 tttgaaactg tcctttacat tctattttca tggttttaag tttggcttgt tttaaagttt
    40441 gcgttgccat gacatgttct acttcactcg tgcctatacc aaaggctaaa gctccaaaag
    40501 ctccatgcgt tgccgtatga gaatctccgc aaaccaaagt aatccctggc aaagtaaagc
    40561 caagttcagg gcttactata tgaactatgc cttgattttt gtctccaagc cctaaaagtc
    40621 ttactccaaa ttccttggta ttttgcatta aagttgtaat ttgctctctt gccatatcag
    40681 aacaagcgtt taaatccaca cttttagttg aaacatcatg atctatagtg gctaaagtta
    40741 aatccgctct tgccatttta cgcttagcca ttttaagccc tgaaaatgct tgtggacttg
    40801 ttacttcatg gattaaatgt ctatcgatat aaagtatagg aaattcattt tcgttttcat
    40861 aaaccacatg agcatcaaag actttttcgt ataaagtttt agccattatt attctccttt
    40921 aaaatttcta aaatactatc ccccattcca tcggtattta aatacgactt agaatttaaa
    40981 tctttagtca tttttccccg tgctaatgcc aaagatatag cattttctat atcctgtgca
    41041 gcttgttctt ctttaaaact atactttaac atcaaagccg cgcttaaaat ttgagctatg
    41101 ggattggcta tgtttaaatg agctatatca ggcgcacttc cacctgctgg ctcataaagt
    41161 ccaaaacctt tatcatttaa acttgccgaa cttaacaaac ccaaagatcc attaatagca
    41221 gctaactcat cgcttaaaat atcaccaaaa agatttgaac aaagcataac atcaaaaatg
    41281 ctaggatttt ttacaatctg catggcagca ttatccacat acatgtattc taagcttata
    41341 tctttataat ctttagcaat atttgctacc acttctcgcc acaaaataga acttgctaaa
    41401 acatttgcct tatcgattag atgcactttt ttctttctta tttttgcact ttcaaaagcg
    41461 atatgagcta tcctttctat ctctttttta gtgtaaattt cagtatcata cgcactttct
    41521 ttacttaaat cttgcttacc aaaataaatc ccgcctgtaa gctctctaac acataaaata
    41581 tccactcctt tttggataat ctcatctttt aaaggcgaag catgcattaa attttcataa
    41641 attttacaag gacgtaaatt tgcaaacaaa ttaaaatgtt ttcttaaagg caaaagtgac
    41701 gctctttctg gcctttgatc tataggtaaa ttatcccatt taggcccacc cacagaacca
    41761 aataaaatcg catcgctttg ttcgcaaagc tttaaagttt catcactcaa agccactccg
    41821 taagcgtcta tgcttgcacc gcctatctta gcttcgttaa attcaaatct aaagtcgtat
    41881 ttttgtgcaa taaaaattaa aatttttaaa gcctctttca tcaccaaagg ccctatgcca
    41941 tctcctgcta aaactgctat tttataagtt ttcatgccat tttcctttct tctactttta
    42001 aagagcgata aatcgcatta taagcactca caaaagcttg tgctgaagcc tctatcacat
    42061 ctgttgaaag tccttttcca tggaattttc tccctttaaa ttccaaatct acatccactt
    42121 gcccttgggc atcgactcct gaactttttg catcgatact ataagctttt aacacaggct
    42181 ttaaattcgt tatcctagca atacagttaa aaactgcttc aacaggacca tttcccgtgc
    42241 aagcttcagt ttttagatct tctttgatac gcatacaaac acaagcagtt gggatattgc
    42301 cactgattac gtttaatttt tcaagcacaa attcattctc ttcttcattc tcatagctta
    42361 aaaacatcaa agcttctaaa tcataatcat acacttgacc ctttttatcc gcaaggcgta
    42421 aaaaacgttc ataaacatca tctaaattat aagtattttc atcatagcct aaattttcaa
    42481 gacaagtttt tatcatggcc cttccacttc ttgctgtcat tagcatacga ttttcatgaa
    42541 ttcctatagc actaggactg atgatctcat aagtttgcct atttttaagt actccatctt
    42601 gatgaatgcc cgaactatga gaaaatgcat tgctgcccac tatagcctta tgcgagggta
    42661 tgctttcatt ggtgatagct gaaactaatt ttgaagtttt agagatattt tcacatttga
    42721 tatttgtata aaaacctttt aaataatcct ttctagtttt tatcgccatc accacttctt
    42781 ctaaagcaca attacctgcc ctttcaccaa gtccatttat agtacattct atctgccttg
    42841 caccttgtaa aatagcactt aaactattac ccgttgccat gcctaagtca ttatgacaat
    42901 gcacagaaat tatagctttg tctatatttg gcactttatt aaataaaatt ttgatgatat
    42961 tagcaaattc actcggcaag gtatagccta cagtatctgg tatatttata gttttagcgc
    43021 ctgcttttat cgcattttct accataaaac aaagattatc tataggggtt cttcctgcat
    43081 cttcgcatga aaattccaca tcatcagtat aagatcttgc tcttataatc gctctttttg
    43141 ccatagccaa aatttcatca aaatcttttt ttaatttatc ttgtatatgc aaagtcgaag
    43201 tggctataaa agtatgaatt ctaaaatgtt ctgccacttt taaagcttca taagctatat
    43261 ctatgtcttt atccaatgcc ctagaaagtg cacaaatggt tgagttttta accttgcaag
    43321 caatattttg caccgcttta aaatcccctt gtgaagatac aggaaaacct gcttctatca
    43381 catctacacc taaattttca agtgctaaag caatttgtaa tttttgattg atacccaaag
    43441 aactgcctaa agcttgttct ccatcacgca aagtagtatc aaaaattatg attttattat
    43501 ccttcatgat ttaatccttt aaaactaaat agactaaatg aatttaaaaa ttcaaaaact
    43561 taaaaacaat gataaaaatt aaaaatattt aaacttttct taaaccattt aataagtaaa
    43621 aaacggatta aaaataaaat tgagttttag agtgagagtt gcagtagcag gttaaaagta
    43681 ttgtttttac ttttttgctt tttgatttga cttgaatttg aaattttaac aacctgtgtc
    43741 attatcgcct cctttataaa ttttattgtt tttaatttag catattttta gttaatacgc
    43801 aaaataaaat ttataaatta agaaatttat tgttataatt gcaattttaa gtaacaaaaa
    43861 ggatgttgat gttaaaagaa ctcttagata ttaaaaaaga aatggaacct gttatccacg
    43921 aagctaatgt gaaattaaat gtcctagctc gtgaagttat agtccgcaag aaagaatacg
    43981 aaatttacgg ccctatgata gatcgcgttt atcttgacaa tgccatttat gttaaagtta
    44041 tgtcaagtgg acgcgatgta aaaacagata atgtaactat aaaaaatggt ttttacatgg
    44101 tttttgtcgc ccctgaaaaa gaaagtacaa aagatatcaa aaacaaactc aaagtagctt
    44161 atgaaggact tgataacaaa ttcatcgcta cgcttatacg ctcttgtcaa cgctttaaag
    44221 agatcataaa taaaacccaa accacactcg ctaaagcttc taaaatgaat gtagtagtaa
    44281 aaacaaattt aggcgaagca agtgctgctt taaaatttaa catcaatata gaatacacta
    44341 aagaaaatca aaaactcact cgtgaaaatt caaaatcagc aggaagtttc agagatacca
    44401 aaacttatat caatcttgta gtagaaaaaa gtacagattc taaaatttgt gaaaagttac
    44461 ttgatgatgt tgaaaaatac tttatcggtg gaggttgaaa tcctatcaat aaagtatttt
    44521 attaaaattt gtaggtataa cgtataattt gtttatcata gtttttgata aaaatctcta
    44581 gcattgtatt tgattttcct actttaaaac ctgctttgaa ttcattggtg tttttaatgt
    44641 tttttacata tagcctaaat atccgcccgc aacagctcta actctttcaa aaattttcgg
    44701 ctaaaactga acttaaaaat atacaatacc tacaattacg cttaaaaatt tttattcata
    44761 actttctttc ttaaatggat tttggtacta ccatatcact gcggcattct atcaccgtat
    44821 gtacatttcc gcgtggatta aaatccccta caactttaat ccattttggt ttgagtttat
    44881 cttttaaggt attataaatt tcattgatgc ttgcttcatg tgaaacattt ctatgcataa
    44941 aagtattgat ataaagtttt atcgctttaa gttcaactac aaattgatcc ggtatatact
    45001 caagataaat cgttgcaaag tcaggataac ccgaacgcgg acaacaacac ataaattcag
    45061 gcaaagtgat ttttataata taatcatttt tagtatcatt aggccaaatt tccatttttt
    45121 ctacatcaaa ttctttaatt tctttttcac cataacgcat aagatttcct tactaaacat
    45181 ttttagtaaa ttatataaaa aattgctttt agagtaattg aaaaataaac atttttagta
    45241 aattatataa aaaacattcc tcacagaaga caaaatcatc aaagcacaat ttttttgctt
    45301 tgatacacat cataatttag ccaagtatcc taaaatcgct tgtaggatta ctaagtcttg
    45361 agtaaatatt gctaagtttt gaagattaaa ccttactgca gcttgatcta aattttaaga
    45421 atttatgtga attatttaaa aattttattg caacccactc cttagcaaga gtgagttagc
    45481 aataaattga aggcagtcaa gcctaagcct agtattacaa aactaccaag ataggcttgt
    45541 aaaacaaggc ttgcttcctt aaaggaagca aaaacaatat tttatagaat ggtcaggctt
    45601 aaattattgt ttaagctgaa tcaaggtttg aagcatttga tcacttgttg aaatggtttt
    45661 agagtttgct tgataacccc tttggatgat aataagctct gttaaagaac ggcttaaatc
    45721 cacatttgac atttcaagag ctgaggtttt catctcacct ctaccacctg ttcctgcttc
    45781 acctactacg atattaccac tatttgcagt aaccttaaaa agatttccac ctatttcttc
    45841 aagacctgag ttattagcca ctgaagccat tgcgattttt gctactgcaa aagtcttacc
    45901 attggtaaat tcacctaaga tattaccttt atcatctaca cggatcgcat caggttttaa
    45961 gtttcctgaa gtataaccat cggttgcttg tcctgttaaa gttgaagctg aatttgagct
    46021 tacaagacca tcattacttc cacttgttcc aaaggaaagt ttgatttgtt gattcggtgc
    46081 agcaccattg tttggtgaaa aatttatagt tcttggtgta taactggcta aagatccatc
    46141 attgttaaat cttgctgttc ctacgataat attatttggt ccttcacctg tagtattgat
    46201 ctctgcaggt tcaggtacac ggatgatcat ttgccattca ttacccccat cttgagtggt
    46261 gctttgctta acaaactgca cttctaaagt gtgttttgag cctaaagaat cataaatttc
    46321 aagtccggct gaaaaagcag aaagcttaag ttgttcactt tctttaatct gatttcctac
    46381 aaccaaagga ccatcaaaag ctttaaaaat agatgtaaaa gcatcattgg tacttacagt
    46441 tccttgtcta tcgctatagg ctgttatatt aaaactcatg gtttttggat tcgttgtagt
    46501 aggagctgcc acaccattga tagcatttgc tggaacagtt gattgttcat tagcattaga
    46561 aatggcaaaa tgtccatctg ctgttaccac tacctttata ttttgattga tatcacttgt
    46621 agcaaaagtt ccacttccat cataatccac cccatatcta gcatctcttt gtaaaagttc
    46681 tcttagatct tctgtagttc taaaagtcct tacatcagta tttaaaagtc caccattaac
    46741 agcatcccaa taagctgctg aacctggatc agttggtctt gtatttgcat tattatcagg
    46801 ttgaaatgct ggtccaccat caggattata cataggacct atatctacag gatttgaact
    46861 atagatatat ttatgtgctg ttattacttg agcatttaat gcaccattaa gctgaacagt
    46921 atttgccgca gctggtggtg gtggagtgaa tgtaacagtg tcagcagtcc ataaagagct
    46981 attattctta tttatagtag gagtattacc ggcaccctga ccattattga aagtaaatgt
    47041 ttgattttga gcactccaaa cagcattcca taattctcct gctgtatttg tatctgcaac
    47101 tacgagattg atatttttca tattatcagt agtaccatct gaattagtat taataaaatt
    47161 aattccacta ccatctttac ttttaacagc tcttactcct gttccatctc ttgtatcggt
    47221 tggagctgta aaagtgttaa tataagctat agcatcatca atactttgaa tgtcagcgtt
    47281 ttgaattcta actccattta aagttatatc taaatttact ttttgagcgg gtgttcccca
    47341 aaaagcagcg gtttgatttt gttgtaaatt tggatcaaaa gcactttggc ctactttatt
    47401 agtagagtat gccgcatccg cataagatat ccaaattcct tgtccatctc ttagattaag
    47461 tccttgtcct tttgcattga aaagcgatgc cgcatccacc cctttttctg taacgtcaag
    47521 agaattttta gaagtggtat aaaactgagt ggttcctgta tcattttcat cttctgatct
    47581 acttgttcta ttattccatc catgaataga atctaaagca taaagatttc tgcttgaagt
    47641 tcctatattt aaaccactgt ttaagtttgc tttgatagct acttcagtag actgtgctgc
    47701 agggatatgc atacctggat caacaaaaat attttgcgga gttcttgaac tatcgattgt
    47761 ttgatcgtcc caattgatat tccaaccttg cactacaaaa ccagcattat taacaaaatt
    47821 tccataagca tcaagtttaa aatcccctga acgagtaaga tagtttgtaa gaccaccatc
    47881 atcactcacc ataaaaaaac catcaccatt aatcgccaca tcggtatttt tatctgtagt
    47941 ttgaactgaa ccttgagaat gaattctagt cgtagaattc actgaaacgc caagaccgat
    48001 ttgaagtggg ttttgtccgc ctcttccatc tgttggagct gtagcaattt taacagtttg
    48061 agaaaacatg gttccaaaat ctgcacgaga gtatttaaaa ccagtggtat taacatttga
    48121 aatgttatta ccttcaacat ccattgcaac ttgatgtgct tgtagtccgc ttacgccaga
    48181 ccaaagtgat ctcatcatct taaatccttt ataaaatatt gctttaaaaa atttaacgct
    48241 ttaactttaa aaaatttttg cgtttatgtg gagcttataa gcaagttcta ttccaacttt
    48301 tgaaattttc tatgaaattt taaaaaaata tataaaaaat ttaaaggtat tttgggagtt
    48361 tatgaaactt tagggtttta tgtaataaaa attaccaaaa tcatacccta actcttaaat
    48421 tcgcagcatg agttaaagcc actgcaatag catctgtgat atctaaaggt ttaatatctt
    48481 ttctaagtcc taaaagtctt tttaccatga aagcaacttg ttctttggtt gctttggctt
    48541 ttcctgtaac tgcttttttt acttgtaagg gagtgtattc tgcaaagtct ccatgaattt
    48601 gaagaatttt taaagataag gctccacgaa attgtgcaag ttttaaaacg gtttttggat
    48661 tataagcaaa aaagatatct tctatagcca cctcatcaaa agaatgattt ttaaaaatca
    48721 agtccaaacc ctcgcaaagt tctgtaattt gatactgtaa ggtacttggt tttatcttta
    48781 taagtcctgc ttctatgaga atgttttttg ttttgtttat ttctataata gcataaccac
    48841 aatttctcga acctggatct atacctaaaa ttttcaaatt ttataccttt tgaaaatgaa
    48901 atgcaaaaac ggattttaac ctttttttat gaaatttaag ataaaattta tacactatgc
    48961 aaaatttaaa gagagactat gaatccaagt caaatacttg aaaacttaaa aaaagaatta
    49021 agcgaaaacg aatacgaaaa ctatctatca aatttaaaat ttaatgaaaa gctaagcaaa
    49081 gcagatcttt tggtctttaa cgctccaaat gaacttatgg ctaaattcat acaaacaaaa
    49141 tacggtaaaa aaatcgcaca tttttacgaa gtgcaaagtg gaaataaagc catcataaac
    49201 atacaagcac aaagccaaaa acaaagcaat aaaagcacaa aaattgatat aactcatata
    49261 aaagcacaaa gcacgatttt aaatccttct tttacttttg aaagttttgt tgtaggagat
    49321 tctaacaaat acgcctatgg ggcatgcaaa gccataatac ataaagacaa acttggaaaa
    49381 ctttataatc ccatctttgt ttatgggcct acaggacttg gaaaaacgca tttgcttcaa
    49441 gcagttggaa atgcaagttt ggaaatggga aaaaaagtca tttacgctac aagtgaaaat
    49501 tttatcaatg attttacttc aaatttaaaa aatggctctt tagataaatt tcatgaaaaa
    49561 tatagaaact gcgatgtttt acttatagat gatgtgcaat ttttaggaaa aacagataaa
    49621 attcaagaag aatttttctt tatatttaat gaaatcaaaa acaatgatgg acaaatcatc
    49681 atgacttcag acaatccacc taatatacta aaaggtataa ccgaacgctt aaaaagtcgt
    49741 tttgcacatg gaatcatagc tgatataact ccacctcagc tagatacaaa aatagccatc
    49801 ataagaaaaa aatgtgaatt gaatgatatc aatctttcta atgatatcat aaactatatc
    49861 gccacttctt taggggacaa tataagagaa atcgaaggta tcatcataag tttaaatgct
    49921 tatgcaacca tactaggaca agaaatcaca ctcgaacttg ccaaaagcgt gatgaaagat
    49981 catatcaaag aaaagaaaga aaatatcacc atagatgaca ttttatcttt agtgtgtaaa
    50041 gaatttaaca ttaaaccaag cgatgtgaaa tcaaacaaaa aaactcaaaa tatagtcaca
    50101 gcaagacgta ttgtgattta cttagctagg acacttacgg ctttaactat gccgcaactt
    50161 gcaaattatt ttgaaatgaa agatcatacg gctatttcac ataatgttaa aaaaatcaca
    50221 gaaatgatag aaaatgatac ttctttaaaa gcaaaaatcg aagaactaaa aaataaaatt
    50281 cttgttaaaa gtcaaagtta agtgaaaaga tgtgaaaaat aaaaactaga gtgtgaaaaa
    50341 aagaaattaa gcaaagtatg ataaaataca aatttgatta ttttgctttg aagaatttca
    50401 caatttcaac aagcttatta ttacaacgaa tttaaaatta aaataaacca aggagaaaaa
    50461 atgaagttaa gtatcaataa aaatacttta gaatctgcag tgattttatg taatgcttat
    50521 gtagaaaaaa aagactcaag caccatcact tctcatcttt tttttcatgc tgatgaagat
    50581 aagcttctta ttagagctag cgattatgaa ataggtatta actataaaat aaaaaaaatc
    50641 cgcgtagaat caaatggctt tgctactgca aacgcaagaa gcatcgcaga tgttattaaa
    50701 agcttaaaca atgaagaagt cattttagaa acaattgaca atttcttatt tataagacaa
    50761 aaaagtacaa aatataaact tcctatgttt aatcatgaag attttccaaa tttcccaaat
    50821 atagaaggaa aaaatcactt cgatattgat tcaagtgatt taagtcgctc tcttaaaaag
    50881 atattaccaa gtattgatac aaacaaccca aaatattctt taaatggtgc atttttagac
    50941 ataaaaacag ataagatcaa ctttgtagga actgatacaa aacgccttgc aatttatact
    51001 ttagaaaaaa caaataatca agaatttaac ttcagtattc ctaaaaaagc catcatagaa
    51061 atgcaaaaac ttttctatga aaaaatagaa attttttatg atcaaaatat gcttattgct
    51121 aaaaatgaaa attttgaatt ctttacaaag cttatcaatg ataaatttcc agattatgaa
    51181 aaagttatac caaaaacttt caaacaagaa ctcagctttt caactgaaga ttttatagac
    51241 agtcttaaaa aaatcaacgt tgtaactgaa aaaatgaaac tccattttaa taaagataaa
    51301 atcatctttg aaggaataag tttagataac atggaagcaa aaacagaact tgaaattcaa
    51361 acaggagtaa atgaggaatt taacctcact ataaaaatta aatatttact tgatttttta
    51421 acttctatag aagaagaaaa atttacttta agtgtaaatg aacctaattc agcatttata
    51481 gtcaaatctc aaggactatc aatgattatc atgcctatga ttttataata aaaacgagta
    51541 aaaaataaag gaaaaatatg caagaaaatt acggtgcgag taatattaaa gtcttaaaag
    51601 gcttagaagc tgttagaaaa cgcccaggta tgtatatagg agatacaaat ataggcggac
    51661 ttcatcatat gatttatgaa gttgtagata attctatcga tgaagctatg gcagggcatt
    51721 gtgatactat agatgtaaaa atcactaccg aaggaagctg tatagttagt gataatggtc
    51781 gtggtattcc tgttgatata catccaactg aaaatatacc aactttaact gttgttttaa
    51841 ctgttcttca tgcaggggga aaattcgata aagatactta caaagtttca ggtggtttgc
    51901 acggtgttgg ggtttcagtt gtaaatgctc tttctaaaaa acttgtagct acagttgaaa
    51961 gaaatggaaa aatttaccgc caagaatttt cagaaggtaa aattatcagt gaatttggtg
    52021 tgataggaaa gagtaaaaaa acaggaacaa ctatagaatt ttggcctgat gatcaaattt
    52081 ttgaaatgac tgaatttgat tatgaaattt tggttaaaag atttcgtgaa cttgcatact
    52141 taaatccaaa aattactata aatttcaaag ataaccgcat aggtaaacat gaaagttttc
    52201 attttgaagg cggaatttct caatttgtta cagacttaaa taaaaaagaa gctttaacta
    52261 aagcaatctt ttttagcgta gatgaagaag atgtcaatgt agaagtagcc ttactttata
    52321 atgatactta cagtgaaaat ttactttctt ttgtaaataa tataaaaact ccagatggtg
    52381 gaacacacga agcaggtttt agaatgggct taactcgtgt gataagcaac tatatagaag
    52441 ccaatgcaag tgctagagaa aaggacaata aaattacagg tgaagatgtg cgtgaaggtt
    52501 taatcgctgt tgtaagtgta aaggtgcctg aaccacaatt tgaaggccaa actaaaggca
    52561 aacttgggtc aacttatgta cgtcctatag tttcaaaagc aagctttgag tatttaagta
    52621 aatattttga agaaaatcct atcgaagcta aagctataat gaataaagct ttaatggcag
    52681 cacgcggtag agaagcagca aaaaaagcta gagaattaac gcgtaaaaaa gaaagtttaa
    52741 gtgtaggaac tttaccagga aaattagctg attgccaaag taaagatcca agtgaaagtg
    52801 aaatttatct tgtggaaggg gattctgcgg gaggttctgc aaaacaaggt agagaaagat
    52861 ctttccaagc tatactgcct ttgcgtggta aaattttaaa tgttgaaaaa gcaagattag
    52921 ataaaatttt aaaatctgaa caaattcaaa atatgattac tgcttttggt tgtggtgtag
    52981 gtgaagattt taatctttca aaacttagat atcataaaat catcattatg acagatgctg
    53041 atgttgatgg ttcacatata caaactttgc ttttaacatt ctttttccgt tttatgaatg
    53101 aacttgtagc taacgggtat atttatttgg ctcaaccacc tctttatctt tataaaaaag
    53161 ctaaaaagca aatttattta aaagatgaaa aagctttaag cgaatacctt atagaaactg
    53221 gaatagaagg tttaaactat gaaggtatag gaatgaatga tttaaaagat tatttaaaaa
    53281 ttgttgcagc ttatcgtgtg attttaaaag atcttgaaaa gcgctttaat gtgatttctg
    53341 tgatacgcta tatgatagaa aattcaaatt tagttaaagg aaacaatgaa aaattattta
    53401 atgtaatcaa gaaattcttg gaaacacaag ggcacaatat cttaaattat tatatcaatg
    53461 aaaatgaaat tcgagctttt gttcaaactc aaaatggttt agaagaactt gtgatcaatg
    53521 aagaactttt cactcatcca ctatatgaag aggcaagtta tatttttggt aagattaaag
    53581 atagaggcct agaatttaat aaagacattt tagaaattct tgaagatgtt gaaactaatg
    53641 ctaaaaaagg tgctaccata caacgctata aaggtttagg agaaatgaat cctgagcaac
    53701 tttgggaaac aacaatggat ccaagtgtaa gaagactttt aaaaatcact attgaagatg
    53761 ctcaaagtgc taatgatacc ttcaatcttt tcatgggcga tgaggttgaa ccaagacgcg
    53821 attatatcca agcacatgct aaagatgtaa aacatttgga tgtatgaatt atcattgaag
    53881 aaatgatttc ttcaatgaat tttatttatt tttgtaagag tatagctaga ggaattcttc
    53941 ttcttgtatc gtatttttct ccataatatt tttcaagata atttaaaatt ttttcttcat
    54001 cttcaggttc tatttcccaa agaccttcac tttcttgcat ccatcttata gctgctaacc
    54061 aagttttttt atttgcatgc atatttgtga ttaaatttga attatgacaa gctaaacaat
    54121 ttgcttccac taaaggtgaa tcaggatcga tgatcaatcc tgtatcaggg ttaatttgaa
    54181 gattttgagc ccaacttaca ctaaaaaata atgctaaaat taagtataat ttttttatca
    54241 tacttaaact ccataaacat taattctatg gcatgcatta ttgatatatc ctcctggatt
    54301 ccattgtgct aaaaccatag gttgactatt accttgacta tcgatagccc ttgcccaaat
    54361 ttcataatat ccttttgttg gtattgatat ttgagtactc catttttgcc atgccaatct
    54421 atttaatggt ttttctacct ttgctttaat ccatgttaca ccataatcat cgcttacata
    54481 aacttcacta acttcaagtt ctccagccca agctttacct ctaacttcaa attttttatt
    54541 tgcttttatt tcagaaccat ttttgatgtt agtaattaca gatcttacag gcattgattc
    54601 tatgattttc atctcacctt tatagttaaa atctcctggt tttactggat ttacaggaac
    54661 tttataagaa ctttccattt ttgaaccatc atgaatttta tttcttactg aaattttata
    54721 aagccattta ccacttgtac ttccaggata gccaccacaa acaagtctaa gaggatagcc
    54781 attttcataa ggaatatctt ttccttcata agcccaagcg attaaagttt catcttgtaa
    54841 agctttagaa atagggacac ctctactaat aggtgaagct tcttccccat ttaattttgt
    54901 atctatacca taatatccga tataaaccgc atcattttta atgccacagt cttgtaaaat
    54961 atcttttaaa cgcactcctg tccatctacc acagcttacg gcaccatatc cccattgagt
    55021 tccttttgtg ctaggtatga cttcagatct accgtttcca ccacactcta atgttaaggc
    55081 ataagtatag gttttaaatt tcttttttaa atcttctatg gtgtaagaat ttttattgat
    55141 aacactttca ccatcgattt ctaaagtcca acctttatga agtctttctt taatcgtttc
    55201 taaacttggt gctaaaccat tatttctaac aaagaaattt tcaggtttgg taaaatcaga
    55261 atcaagagca taaatttcag tttctgctgt taatggtttt tcgccatgat agataaggtc
    55321 tttttttcct tctattttaa aatgaggcaa ttcttttgct aaagccttac ttcctaaaaa
    55381 attctcaaaa gaaaaatttg acaatacact gacaccaagt aaaccaaatc ctacattttt
    55441 tagaaaatct ctgcgatttt ctttattgtg tttgttttcc attgaaatcc tttatgtttt
    55501 ttccatatta gtataacaca aaaaaaaaaa aataagataa aatcaatctt ttttattaaa
    55561 attaattatt tttgataaca cttattctgt ttactaggag atacaagaag tgaaataact
    55621 atggagttac tattggtttt aggtagcatt attgctatat ttttgtaatt tatataaatc
    55681 tattaaaata ttttttaatt tatttatttt taagataaaa attatatcgg tttttaaaaa
    55741 atgtatgcta taatccttaa taaagctaat aaaatttaaa tcagtcttat aaggaggtca
    55801 aaatggattt agaaaatatc ctagaaaata atcaaagcat aggtttatat cacccaaaga
    55861 acgaacacga tgcctgcggt atcgctgcag ttgctaatat acgcggtatt gcctcttata
    55921 aggttatttg tgatgcttta gaaattttga tgaatcttga acaccgaggt ggtgcgggag
    55981 ctgaagaaaa ttcaggtgat ggggctggga ttttgatcca aattccgcat gattttttca
    56041 aaacccaaga attaggtttt gaacttccta aaaagggtga ttatgccgta gcacagatgt
    56101 ttttatcacc caatactgat gcaaaagaag aagcaaaaga gatattttta caaggtttaa
    56161 aagataaaaa acttgaattt ttaggtttta gagaagtgcc ttttaatcct agtgatatag
    56221 gtgcaagtgc tttaaaagct atgccttatt ttttacaagc ttttgtgaaa aaaccgagca
    56281 aagtaagtgc gggacttgag tttgaaagag tgctttatag cacgcgtcgc cttatagaaa
    56341 aaagggctat aaatgtgcca aaattttatt tttcaagttt ttcttcacgt actatagttt
    56401 ataaaggaat gcttctttca actcaattaa gtgattttta tcttgatttt aaagatgtca
    56461 atatgaaatc agccatcgcc ttagtgcatt ctcgtttttc gactaatacc tttccaagct
    56521 gggaaagagc tcatccaaac cgttatatgg tgcataatgg agagattaat accatacgtg
    56581 gaaatgttga tagcataagt gctagagaag gtttgatgca aagtgagtat tttgaaaatt
    56641 taaatgaaat ttttcctatc atagcaaagc ctagtagtga ttctgcaatg tttgataata
    56701 ctttagaatt tttagctcta aatggtcgca ctttagaaga agcttttatg atgatggtgc
    56761 ctgaaccttg gcataaaaat gaaaatatgg aaagtaaaaa gcgtgctttt tatgagtatc
    56821 attctttatt gatggagcct tgggatgggc ctgctgctat agtttttact gatggagtga
    56881 ttatgggggc gagtttagat agaaatggtt ttcgtccttc aagatattat cttacaaaag
    56941 atgatacgct tatactttca agtgaaacag gggttttaaa attagatgaa aaaaatatca
    57001 aagctaaaaa acgcttagaa cctggaaagc ttttgcttgt tgatacagca agaggtagag
    57061 ttatagctga taatgaaatt aaagagcatt atgccaatgc taagccttat aagaaatggc
    57121 ttaaaaattt agttgaactt gaaaaacaaa aaagcggagt ttataaacat cagtttttaa
    57181 aagaagatga ggttttaaaa cttcaaaaag cttttggttg gagttatgat gaacttaaaa
    57241 tgagtgtggc tgctatggct gaaaatggta aagaagctat agcggctatg ggtgtggata
    57301 ctcctttggc tatactttct aaaacttatc aacctttata taattatttt aaacaacttt
    57361 ttgcacaagt aactaatcca cctcttgatg ccataagaga agagatcgtt acttctacaa
    57421 ggatttatct aggaagtgaa gggaatttgt taaaaccgga tgaaaataat gcaaaacgcg
    57481 taaaaatagc cttacctgtg ataagcaatg aagaactttt tgaagttaag gctttaaata
    57541 aatttcaagt taaagaattt tctatacttt ataattattc taaaaaaact ttagaaaagg
    57601 ctttagatga actttgtgtt aaaatagaag atgaggttaa aaaaggtgtt tctatcatta
    57661 ttttaagtga taaaggagta gatgaaaaaa atgcttatat ccctgcttta ctcgctgttt
    57721 ctggagtaca taaccatcta gtaagaaaaa atttaagaac acatacaagc cttatcatcg
    57781 aaagtggtga gcctagagaa attcatcatt ttgcatgtct tttaggttat ggtgcgactg
    57841 ttattaatcc ttatttggtt tatgagagca tacaaaaact cattgctaat aaagatttaa
    57901 atttaagcta tgaaaaagcg gtagagaatt tcatcaaggc aagttcaagc ggtatagtca
    57961 aaattgcttc taaaatggga gtttctacct tgcaaagcta taatggttct gcactttttg
    58021 agtgtttggg tttaagttct aaagtgattg ataaatactt cacttctaca acttcacgca
    58081 ttgaaggtat ggatttagaa gattttgaaa aggaactcat tgctttacac aaacacgctt
    58141 ttaatgatac acacaaggct ttagattcta aagggattca tggttttaga agtgctaaag
    58201 aagaacattt aatcgatccg cttgtgattt ttaatcttca gcaagcttgt cgtaacaaag
    58261 attataaaag ttttaaaaaa tactcggctt tagtagatga aaaacaagtt aatttgcgtt
    58321 ctttgatgga atttgatttt agtgaagcta tcagcataga taaggttgaa agtgtagaaa
    58381 gtatagttaa acgctttaga acaggggcta tgagttatgg ttctatttct aaagaagcac
    58441 acgagtgttt agcacaggct atgaataaaa taggtgctaa gtcaaattca ggcgaaggcg
    58501 gtgaggatga agaacgctat gaaattaaag atggagtgga taaaaactca gccattaagc
    58561 aagtagcaag tgggcgtttt ggtgtggatt taaattactt aagtcacgca aaagaaattc
    58621 aaatcaaagt cgctcaaggt gcaaaaccag gagaaggtgg gcaactaatg ggctttaaag
    58681 tctatccttg gatagctaag gctagacatt ctactgcagg tgtgacactg atttctccac
    58741 ctcctcatca tgatatttat tctatagagg atttagccca acttatttat gatttaaaaa
    58801 atgctaacaa agacgctaaa atttcagtaa aacttgtaag cgaaaatggt ataggaacag
    58861 ttgctgcagg cgtggctaag gcaggagcga atttaatcct tgtttcaggt tatgatggag
    58921 gcacaggtgc aagtcctaga acttccatac cgcatgcagg aattccttgg gagttaggtt
    58981 tggctgaaac gcatcaaact ttgattttaa ataagcttag agatagggta agattagaaa
    59041 ccgatggaaa gcttatgaat gggcgtgatt tagccatagc agcactttta ggggctgaag
    59101 aatttggctt tgcaactgca cctttgattg tcatgggttg tacgatgatg agagtttgtc
    59161 atctaaatac ctgtcctttt ggtatagcta ctcaagatac agaacttagg ggtcgtttca
    59221 aaggcaaagt aaatgatgtg ataaatttta tgtattttat agccgaggag cttagggagt
    59281 atatggcaag acttggtttt gaacgccttg atgatatgat aggtcgtgtg gataaactcc
    59341 gccaaaaaag tgtgcaaggt aaagcaggaa agctaaattt agataaaatt ttaaaatcct
    59401 tgcctactta taatagaact gctgtgcatt ttaaagacta taaagacaat aagcttgaaa
    59461 aaacgattga ttatagaatt ttacttccac tttgtaaaaa tgctgtggag aaaaaagagt
    59521 ctatcaagct ttctttagag gtgggaaatc agagtcgaac ttttgcaact atgctttcaa
    59581 gtgaaatttt aaaaacttat ggaaaagatg ctttaaatga agatagtatc catatcaaag
    59641 ctataggcaa tgcgggcaat agctttgggg cgtttttgtt aaagggtatt aaacttgaga
    59701 ttataggcga tagcaatgat tatttaggca agggcttaag tggtggtaaa atcatagcaa
    59761 aaatttcaaa tgaagccact ttttcacctg aagaaaatat cattgcagga aatgcttgtt
    59821 tatacggagc tacaaaaggt gaagtgtatt tagatggtat agctggggaa agattttgtg
    59881 taagaaattc aggagcttta gctgtggttt taggaacagg agtgcatggt tgtgaatata
    59941 tgacaggtgg gcaagttgta gttcttggag atgtgggtgc gaattttggg gcaggtatga
    60001 gtgggggcgt tgtttatatc tttggaagac acaatgaagc tcatgtaaat actgagcttg
    60061 tagatattaa agatcttaat gccaaggatg aaaaagaatt aaaagccgtg atagaaaaac
    60121 atattactta tacagattct aaaaaggcta aagatatact agaaaaattt gacaagaaag
    60181 acttttttaa agtcatgcca agagattatg aaaagatgtt aaaaatgctt gatatttgta
    60241 aaaatgaaaa agatccaaat ttagcagcat ttttgaaaat cacacaaaaa taaggagtaa
    60301 aaatggcagg atttcaatca ccaataacaa tcaatgaagc aatgcaaaga ataaaaaaca
    60361 atgaatattt gcttccagca tttcaaagag agtatgtttg ggagccttgg cagatagaag
    60421 aattatttga ttcactaatg cgaggctatc ctataagttc tatgcttttt tggaaagtaa
    60481 aagatgaaag taagacagct tggaaatttt atagattttt agaatattat cgtgaggagt
    60541 atcatacgca taatgattat tttaacacct caagtcataa agattttgat gcaattttag
    60601 atggacaaca aagattaact tctctttatc ttgctctttt tggaaattat gatattcata
    60661 gaacatataa taaatgggaa gataatgata gatattttaa aatttgtcat ttttatttta
    60721 atctcactca aagcaagaaa ccagaaaatg aaaatgttga atatgaattt ttatggcttg
    60781 ataaactaga gacgaaagag caaagtattt atattgataa acatcagcaa aaatggttta
    60841 agtgcaaaag tatttataat attttagatg tcaatgatat tatggaattt gctgaaaata
    60901 ataatttgca aaagaaagag agaaagcgtt taagcgaatt tcatactttg atttttaata
    60961 ctaaagatga atcaaaaatt aatttctatt tagaagaaga gcaaaatcca gataaagcag
    61021 ttaatatatt tattagaatc aatgcaaatg gtgagcctct tgattattct gatattttat
    61081 ttagtattgc tattgcaaat tggaacaaaa ttgatgcaag aacagaaata aataatcttg
    61141 tagataaaat taatgaaaat ttcgatatct ctaaagattt aatccttaaa ggatttttat
    61201 atttatttca taacaatatt aaatttcaaa tcaatagttt tgataaaaat tttatagaat
    61261 ccatagaagc taaatgggaa ggcataaaaa atgcttttat cgaaacattt agattgctta
    61321 gaagttttgg atttgaagca aaaacacttt catcaaagaa tgctatttta cccattttat
    61381 attttattta tcataaagat ttgacaaata atatagtaga ttctgtcaaa tgtaatgaaa
    61441 atagagctat aataaaaaaa tggttgttaa gggcaattat tttaaagcct tttggtggaa
    61501 gtagtgatac ggtattgtct aacatgcgta aagcttttat taaagatttt aagcaaaata
    61561 gtggcttttt tgatagagaa atagaattat ttccattgga agaaattgaa aaagaggcaa
    61621 aatatataca aacaatagat gaagaatatt tggaaaataa tatcatagaa tgtcgaaaga
    61681 atagccccga atcatttgcc gtattgtctt tgctttaccc aaatttagat tataaaaata
    61741 ataattttca taaagatcat ttgcatccag agtccgcata taaagaatat gaaaaacttt
    61801 gccaaaacac agaaaattgc attcctttta atatttatga ttctttacca aatttacaaa
    61861 tgcttgatgc aaatgaaaat gaatctaaaa ataacaaacc tttaaagcaa tgggtaaatg
    61921 aaaaatgtaa tggaaataga aaggaatttt taagaaaaca cttaattccc gatgttgatt
    61981 tatctttgga aaattttaat aattttatag aagaaagaaa aaaaattatt atagataagc
    62041 taaaaagtat attaaataag gagtaaaaat gggaaatgca agaggttttt tagactttaa
    62101 aagaatggat tttaaaaaaa ttgctcctaa agaaagggtt ttaaattata aagaatttac
    62161 tatgcttttg gataaaaaag aacaagaaat tcaaggcggg cgttgtatgg attgtggtgt
    62221 ggccttttgt catgtgggtg tgatgagcga aggaaaagat gtgggctgtc ctttaaacaa
    62281 tctcattcct gaatggaacg atcttattta tcgctcttta tggaaagaag cttatgaaag
    62341 acttgatctt actaatcctt ttccggaatt taccggtcgt gtttgtcctg ctccttgtga
    62401 ggattcttgt gtgtgcgcga taaatggcac aagtgtgagt attaaaaata atgaattatc
    62461 cattatagaa aatgctttta aagaaaattt agtaagagca aataagccta aacaatacaa
    62521 tggaaaaaaa attgctatca taggaagtgg acctgctgga cttgcttgtg ctaatactct
    62581 aaattcacta ggctataaag taagcgtttt tgaaagaagt gataaaatag gcggactttt
    62641 aatgtatggg attcctgata tgaagcttga taaaagtata gtccaaagac gggtggattt
    62701 gcttaaaaaa agtggcattg aatttaaggc gaatgaaaat atagatagca aagataaggt
    62761 ttcaaaactt ctaaaagaat ttgatgcttt agtgctttgc acaggagcaa gcaagcctat
    62821 agatcttgat atagaaggta ggaagctaaa aggggttgaa tttgctcttg attttttaac
    62881 gcaaaatacc aaaaccttgc taaaaacagg taagggtgca gatacagcca agggtaaaaa
    62941 tgtcttgatt ataggaagtg gggatacaag tgttgattgt attgctgtgg cgacaagaca
    63001 aggagctaaa tccatagtgc gttttgaaag aagtccaaaa agacctttgc aaagaagtca
    63061 aaacaatcct tggcctttaa aagctgatat ttttactact gattatggct tagaagaagc
    63121 cattgccata tatggcaaag atcctagaga atatcaaaaa atgacaaaga aatttttagg
    63181 aaaaactcat gtagaaggcg ttgaagcaaa tgatttaaaa cgcgagttta aagaaggcaa
    63241 ggatataaat gttgaaattc caaattctaa aaaaacttat aaagcggatt tagtactttt
    63301 ggctatgggt tttagtgggt gtgaagaagc tatcgctaaa aattttggag tgaaattgga
    63361 tgaaaaaaac aacataagta cagagaattt ccaaactacc cataaaaaaa tctttgcttg
    63421 tggagatgct agaaaaggac aatctttagt cgtttgggct ataaaagatg gtatagaatg
    63481 cgctttaagt ttgcatcaaa atttagtaaa ataatcataa aagtttaaaa cttttgcggt
    63541 ggagtttgca aattccaaat ttggctataa gttctttatg agcttttgtg ccataagctt
    63601 tgtttttttc aaattcataa caaggaaagt ctttagctaa gaaattcatc actctgtctt
    63661 tgctgacttt tgcaagtatg ctagctgcac ttacttgcaa aatgctagca tcggctttga
    63721 tttgtgtttt tattccattt atacctaggt tggtgttgcc atcatacaag aagttatttt
    63781 ctgttttaaa atgctttttt ataagcttta agcctgtttt taaacaagtg cttaagccta
    63841 gtgtatcgat ttgttctgaa gaaaaagcga gtatgagata gtttgaattt ttaatgatga
    63901 tttcataaag ctcttcgcgt tttttttcac ttaatttttt agaatcacat agcctatcaa
    63961 gttttttgtt tagtttacaa gctgccatca tcatagggcc tgctaaagca ccacgtcctg
    64021 cttcatcaat accgattaaa tttatatcaa attcgtttaa aagttctttt gtatcaaata
    64081 aagttttcaa attttttaaa aagaagggca aaaaacgccc ttttattcca ccgtgatatc
    64141 atttttgatt ttttcaaaaa gcttatcacc tatgccttga acttttttaa tatcatcaat
    64201 acttgtaaaa tttgcttctt tgcggtattc taaaatcgct ttagccttag cttcgccaat
    64261 gccatttaaa ccttttaatt ctttgagtgt tgcggtgttg atatttacag caccaaagag
    64321 aaaagttgtt aaaacaaaaa ataaaaatag taattttttc attttctcat cctttgatta
    64381 aaaataatta taacactata cttaaaaaaa gataagaatt tcttaattta gcccaaaaat
    64441 tcgcgtttaa aatattcttt tggtgcttta cataaaggac aggctgccgg agttttttta
    64501 ccacggtgta tatatccaca cacttcacaa actcataatt ctttttcaag cattttttta
    64561 agtgctaaat attctctttc gtgttcgatt tctactttac caatagctgt aaatagtctt
    64621 tctatagctt ttttaccttc atcttcggca atttttgcaa aatttggata catggttgta
    64681 tgtttataat tttctccttt tatagcattt actaaatttt tagtagtcac ttctaaaggt
    64741 ttaccatcaa cgatttcatg gtaagcttta aattctgctc ttgcgtgcca tttttcattt
    64801 ttggctgctt ctctaaaatg tctagcaact gcatgtcaac cttcttcggc cacgtcagca
    64861 aataaatgca tttgtttctt gccatagatt tgcccgcaaa agctttcatt aaatttagtg
    64921 cagttaaatc cgtagtgatg cactgcgttt cttcactaca acaactaagt ttaccgccac
    64981 ccacattttg aacttctact tcattgccac atttttggca tttataggtt tcatattgtc
    65041 tcattttaac tcctttttga ttatcaaaaa gcattgtatt ataaaaaata tttttatcaa
    65101 ttagtaattt ttattattta tgaaaatata tatcaaaata aatttcacaa aaattaagct
    65161 ttgctaaata taattttaaa aaattattat caggagttac aatgagaagc gatgcgataa
    65221 aaaaaggaca tttaaaagca cctaatcgtt ctttacttcg tgcttgtggt ttgaaagatg
    65281 aagattttga caaacctttc ataggtgtag caaatagcta tatagatata atcccgggtc
    65341 attatttttt aaatgattat gctaaaatca tcaaagatga gatacgtaaa aatggttgcg
    65401 tgccttttga gtttaatacc ataggtgtag atgatggtat agctatggga cacgagggta
    65461 tgctttactc cttgccaagc cgcgaactta tcgcaaattc cattgaaaca gtgatgaatg
    65521 cccatcagct tgatgcttta atttgtattc caaactgtga taaaatcact cctggtatgc
    65581 taatgggagc tttaagggta aatgttccaa ccatctttgt aagtggtgga cctatgactt
    65641 cagggttaac caaaaaagga gaaaagatca gtcttagctc tgtgtttgaa gctgtgggag
    65701 cttatgaagc aaaaaaaatt agtgaagaag aatttaaaga catagaatgt tcagcctgtc
    65761 caagtggtgg atcttgctca ggaatgttta ctgcaaattc catgaatacc ttatgtgaag
    65821 ctatgggtat agcgttagaa ggcaatggaa ccattttagc tttaagtaaa gaaagagaag
    65881 aacttttaag aagagctgca cgccgtattt gtgaaatcgc cttagatgag cgttttaaaa
    65941 ttcgcaatat catcactcaa aaagccgtgc gtaatgctat ggtggtagat atggcaatgg
    66001 gtggaagtag caacacggtt ttgcatatgc ttgctatttc acgtgaagca ggtgtagcat
    66061 tagatatcaa agacttaaat ttcatttcaa gcaaagtcgc acacatagca aaaatagctc
    66121 catcgctaaa tagtatttat atggatgata tccataaggc agggggtgta agtgcagtta
    66181 tggctgaaat ttcaagccaa gaaggacata tcttagaact tgatgcactt actatcacag
    66241 gagaaagtct caaagaacgt ttaaaaaatg ccaaaatcaa agatgaaaac atcattcgta
    66301 aagtagataa tgcttactca aaagtgggtg gacttgctat tttgtttgga aatttagctg
    66361 agcaaggttg tgttataaaa actgcaggaa tagttgggga aagaaaattt aaaggcaaag
    66421 ctgtttgttt taattctcaa gatgaagcta taaaaggtat cattaaaggc aaggtacaaa
    66481 aaggaaacgt ttgtgtgata cgctatgaag gtccaaaagg aggtcctggt atgcaagaaa
    66541 tgttaagtcc tacttcactt ttaatgggca tgggtttagg tgctgatgtg gctttaatca
    66601 ccgatgggcg ttttagtggt gctacaaggg gtttaagcat aggacatatt tctcctgaag
    66661 cagctgaagg tggacttata ggacttttaa aagatggaga tgaaatagaa atcgatgtag
    66721 atgcttatac tatccatgta aatttaagcg aagaagaaat cgctaaacgg aaaaaagaat
    66781 ttgtattacc tcaaaaagaa gtatcttcaa gatggcttag aatgtatcaa aagcttgtta
    66841 gcaatgctag taaaggtgcg gttttggata tggaatgaaa ggtttccttt cattcttcta
    66901 tttctttggt tatacgattt cttatatctc tacgaactat ttccataccc caaagccaaa
    66961 taatatgacc aaaaatttca gataaatgtt catcaaaagg aatttcagaa agcggtggaa
    67021 cttgtgcgat taaaggcatt acgataacat gggcaaaaag atagacaaaa aatccaaaaa
    67081 ctgcaccttg ccacatagta atacggtgcc atttttctgc tatcatgcaa taagcaacac
    67141 caaaaacaat agaaaaacca acgtgcacta taaaaattga taaaggcatt tgcatacctg
    67201 aaaacacata ggttaaatca gtaggtaagc ctaattgttc tagaaaaatt ttaggcggag
    67261 taacgcgttc taatgcatct gatggccaaa aaatattagg atttcttgga ggaaaaggca
    67321 cttcccaacc ccattttacg attgcaccaa aaatacccgc taatatacct ataaaaaaag
    67381 ctagagtata gtgcttttga aagtatttat tcataacaac tcctttgtat ttatgtaaaa
    67441 ataaaatacg aaatttataa tatttttatt taaaatatat tgaaaatagt aaaataaaag
    67501 tcttatttag attttaaaat actctcttaa gctttcgcaa atttcaaaaa aattcacccc
    67561 atctatagta ggattttctt tgaaaaattc atgcattcct aaaaagccac tttcaagttc
    67621 tttagacttt accccataac ttatactaag tcctgcttct atataagcag cgattttatc
    67681 gcagtattta agtgctttac catcaatagc accaaattca tttttattaa aagaatttaa
    67741 acttccgctg caaagctcga ttttatcgtt tttataagtg cggttttcaa actcattttt
    67801 tacaaaattt ggctcatcgt ttctgccttc tctaatgcct aaaatataag aaaactcact
    67861 ccttaagtct tcaggcacga agggtaaaat tttttcatta atgagtttca tttcataatc
    67921 gtttataata tcatgaagtc cgtcaattcc gtattttaca ggacttataa tatcgcgcgt
    67981 taaagactct ggcaaatcat gaaataaagc gcaataaaaa ttgttttcaa gtcttttatc
    68041 gcaagctttg atttttagtg agtaaaaata tcctaaaatc gccaccacaa gcatatgtcc
    68101 taaaaccgct gtttctggta tgcgtggagt ttgagcccaa cgcttttgaa aacgaagtct
    68161 tccgctaaga tcgatgattt tggctatttt ttgatttaaa gcgatttttc tagcccctat
    68221 aagctcatag taatcttcta attcttcttc cactttgttt ttaatctcat caatatcatt
    68281 taaaaaagct gaagtttgat aaactatgtt aaattcccat cttgtagcaa aatacgaagc
    68341 tgctttcaag ataagccttt ctttggcaca aacattgccg tttaaatacg cttcaaaacg
    68401 ctttaaaaat tctccatctt ctatatcttc tatcataggc tcaattttac ttaaaatcca
    68461 agcattcact tcagtctttt tttgactcac gatttcatga tacacatcag ggcgtatatc
    68521 cgttactacc acacggccta aaaactcaaa aattcctttt tctatgatag ctctcatatc
    68581 tacatctttt tccattttag caataaaata cgcgatgatg aatttatgag cttgtttgtc
    68641 aagctcgacc aaatttgcca ttcttggata atcattccag cgactaattg aagcagcttt
    68701 aaaaatgtgt tctatgagtt ttatgtttat catgcttttg ccttttttgc aatttaaatt
    68761 taaaaatttt agttaaaatt gcgaaattat agcaaattta aggataaaaa tgagtaaaaa
    68821 agcactttgt atcataagtg gtggtatgga tagtactttg tgtgcttatc tagccaaaaa
    68881 agaagattat aaaataattg ctttacattt tgactatgaa caacgcacgc aggagaaaga
    68941 aagagactgt tttgagcaaa tttgcaaggc tttaaaagta gaaaaatctt atattttaga
    69001 tgtgagtttt atcaaagata tagggggtaa tgccttaacc gataaaaata tagatattcc
    69061 taaaaatgag ctttgtataa atgatactcc gcctatcact tatgtgcctt ttcgcaatgg
    69121 aattttttta agtatagcgg gatctttggc tgaaaaggaa aattgtgaga gtatttttat
    69181 aggagtggta gaagaagatg gtagcggtta tcctgattgc actgatgagt ttatacaaaa
    69241 ggcacaaaaa tttatcaatg aaggcacgag taagaatttc aaagtttgca taaaaactcc
    69301 acttgttaga ctaaataaag cccaaattgt aaagttagcc ttaaaagaaa atgtgccttt
    69361 agagcttact tggtcttgtt atgaaagtga agatgaggct tgtggggagt gtgatagttg
    69421 tttacttcgt ttaagaggtt ttgaaaaagc aggttttaaa gataagatta agtataaaaa
    69481 taagccctag tttgcactag gacttaaatt tagtttagag tataaagctt gtttgctcca
    69541 tcttgataag aaagaatgtt gatttttcca tctttaaaga aaatgcttct agcattggtg
    69601 atagagcttg ggaaagcgat agtttttact acttcttctt tagctggatc aattacagca
    69661 atcacattgt gatttttact aagtgcataa atttctccat ttttgaaagt catagaggtt
    69721 acataaagat cacctaaagt tttatcttct ttaagactag cttttggagt aaattcccct
    69781 gaaagaacac gatcttttaa agaaacttta gagattacga aagttttagc gtccttgttg
    69841 tttggaacag ttgcaagata aagataattt ccatctgtgc tcatacttgc cacatggtta
    69901 aatttcgctc ttacagtatc aagtcttcca cgacctaaac cttcaccttg gcctttaaat
    69961 ttatcattgc cttttacaaa atcagcgtat tgtttagcga tatcttcttc gctagcatta
    70021 ggattctttt caaatcttaa gaaagatttg tttgaaccca taagaatgaa tttatcgttc
    70081 atgtaaggta tgatgccgat gattggatca atggtagctg aaaaataagg atcaagttca
    70141 aagctttctt taacactaaa attattatct aagaaagcta catcccattt agagcttgct
    70201 acaaattcat tattgatata atcaagagta ttgattgctt tatcaaaatt tatggtttgt
    70261 tcgcttgtga ttttaagctc atcgtcgatt tttgtaaatg gagagttgtt gatgtcatta
    70321 tcaaatttca cacctagttt ttcatttgca ggtgcaaaag cataatcagg agctttaaca
    70381 tcgcgttttc ctaagaaaga tatattttgc cataagccat tccaaccatc tgtgctccaa
    70441 ataatgtatt ttggatttaa gctaaatctt acaggatcgc cttgtcctag ataaggagga
    70501 acacctgtgc taacaaaagc ttggaaaaca tttgatgcta cgatgatagt gctgattaaa
    70561 accgctgcaa aactaaattt agtgtatttt ctaaattttg ctccgtttaa ctcggcttca
    70621 aaagagttaa atttaggagc aaaagcaaaa ataacaccta aaagcaatac aacagcccaa
    70681 aatactactt cagcccaaaa ataagtatga ataccaaaaa ctgctaaacc aaatccttga
    70741 tctaaatccc tatgagcgtg gttaccatag tgagcaaaag actgataaag tcctactgca
    70801 gttacgatta aaagagcagc aaggtatttg cctttcatac cataacgtac aatgaaaagt
    70861 gctataacac cgatgaaaat cattgcttct ctttgtcccc agcaaagtgt gcaagggcta
    70921 tcacccaaca tataaccaaa tataaaattt gcaataccca caggtaagag tattatcaaa
    70981 aagcctgcta aacatagcag tgtatagaaa ttttttgttt tattgatttc gttcatttta
    71041 gcccttcctt acagatttat tattgttagt aatgcgcctg ctttgtggcc aacatagata
    71101 aaaaccatta aaagccaagc taccattact aaaccaaaag ccaaattttc tttttctggt
    71161 tttttgataa taagtatcaa agctattaaa actaataaaa gttcaagaaa ctccatagta
    71221 tctcctttga aataaaaacg attacattat atttgaaaaa tataaaataa aaataaaatt
    71281 ttttactgaa atttccttgg ttaatttaag ttaaccaagg aaaaaagaag ttactgaaag
    71341 ctacttaatt tttcagagag tttagaagca tcatttaaaa cattttgaga aatattatcg
    71401 atttcacatg ataaatcttt aacagaattt gcaagttcat taaccttgtc tatatttgtc
    71461 cctaagataa gcattttgtc ttttatttcc atacttctat ctttcatagt ttgggttgat
    71521 tctatagaac tttctagttt atgcatagaa tttgcaagct cttgttgtaa atcattggtt
    71581 tttaaagagg tttctttcat ggagtcatgt ataagatcca tcaaggcttt attgtcgttg
    71641 atttgttgaa ctatggtatt aacggtagaa ttgatattta gaagagattt acttgtttta
    71701 tcagcaagtt gtctaacttc atcagctaca acagcaaaac cgcgtccgtg ttcacctgct
    71761 cttgcagctt cgatagccgc atttagagca agtaggttgg tttgatctgc tatatcttta
    71821 atagagtttg tgatttctgt aatattatcc gcactttgag ttagattgtc catattggcc
    71881 actacatttt gttctttttc gttattttca tttatcaaat ttataagttc agatagagta
    71941 agttctgttt tatccatcaa tatatgcata tcttgcatat tttctatact ttcttgtgct
    72001 aaatttcctg caagattgat atgttcatct aaaacatagg tgatttcttt aacgccttga
    72061 atttgctcat gctgagaatt agaactgttt tcaagcatca tagagttgtt tttgagtttt
    72121 tgggaatttt gatgacttga ttttgcattt tctatggctt ctatgattga gttttgaact
    72181 gtagatataa atgaatttat gtattgggca ctttgtccaa gttcactttt tggatctatg
    72241 tttaaacgag aatgtagatt agcttctttg ctagctaaat tagcacttag tttttctaag
    72301 ctatgaattg gcatgatgac ttttttaagt gttaataaaa taaaaaatac aaataatgta
    72361 agagtgattc caaatactgc taaggcgatg taaaatttaa ataaattaga ttgctctata
    72421 gcattttgag taaaagcgtt aatttgtttt aactctttcg taagagaatt attctcgtaa
    72481 atagaagaat tgtcttgcat aatagaaatt tgttttacga tcattgcata atgttttaaa
    72541 aaaagttgta aattttcact ttttgtatcg tttttaattt cttttataag catgttgagg
    72601 tgatttagtg ttgttttttg taaaatattt tctgttgcaa gaactcttaa catggaagtc
    72661 attgttttat agttgtcttt atttgattca tggttttgtt ctaattcttc aaaataattt
    72721 ttagctagtt caaataaata aatttttgaa tttactgcta tggaatttgc ggatttaaaa
    72781 taattaagct ggattagttt ggcattgaaa atttcttctg ccttgcttat atcaatccta
    72841 aaaattttaa gtttttcaaa attttctcgc atttttttta ccgcttgaac gcttgaatcg
    72901 tagttgataa aatgaaaact attttgaaaa acagaattga ttttttcgtt tgaaatttct
    72961 agttgctgaa tcgtattaat caagtcttta ttatctttag atgaagaata gttattaaaa
    73021 ataataccta gcaaaacaag aatgaaaatt gaaactaacg cagataaaat aataaattta
    73081 atcaaaaaat gagttttttt atttgtcatc atattctcct gttagacttt ctaagaatgc
    73141 gactatatta tcaactgttt tttgatctaa aaattttcct agttggtagt aagccataaa
    73201 ctgaacgcaa gcatctaaag taggtacaga tccatcatga agataaggtg cggttttagc
    73261 tatatttcta agactaggaa ctttaaatac cattttatca gcttctcttt ttgtgatttc
    73321 atagcgtcct aaattttctt gatttgggta ttcttcaaaa acaccgattt tttgaaacat
    73381 atttccacct atgttttgac cttgatgaca agaaatgcag ccattagctt taaagtcctc
    73441 ataacctttt ttagcttgag ctgaaatagc attttgatct ccatttaagt agcgatcaaa
    73501 gggagaattt ggagtgatta agcttttttc aaattcagca attgcaaggg ctatattttc
    73561 taccgtaacc cccccccccg taaagttttt taaaagcttt tacataattt tcatttgaat
    73621 taactttttg taaaagaagt tcaggagtta accccatttc ttttggatta aaaaaaggct
    73681 ctttgctttg ttctaccaaa tctttggatc tgccgttcca aaattgtaca aaattaaata
    73741 cggagttaaa tgttgtagga gtgttaaagg gtgtatctat ttgattatca actcctattg
    73801 aaaattcaag tctatcaaca ccgtattgat caagcctatg gcaagtatta catgaaactt
    73861 tcccatcttt ggataagctt ttatccatat aaagactttt tccaagttca gctttttctt
    73921 tatcatagta aatggaattt ggaataggtg ttatcatgtc tactgcaaag actttacaca
    73981 acatgaagta aatcatagta atcatttttt tcataaacaa taatttcctt ttaaattggc
    74041 tttgaaatct tattatacca taatattgat taattattta attttattgc aaagttctcc
    74101 taaattttta taacgcaacg tactttattt cctgatttta aaaaagtata gccaaatttt
    74161 attttgtaga attgttgaaa atttctttta tatttatttt tgagttaata tcaaaatttt
    74221 gttttttgta ttgaaatttt aaacgataag aatgcaaaca taaacgcaaa gcacctgtaa
    74281 gttttaagcg ttgtttagga cttaattttt catctaaaat gctttcaatc tgttcttttg
    74341 caagtccata aagtggatcg cctaaaatgg tgtgattttt ataatgcaaa tgcactctta
    74401 tttggtgctg tctgcctgtt aggggtttgc aaagcaaaag agtggcattg agtgtaggaa
    74461 aatactctaa aatttcaaat tcagtgatag cttgttttcc ttgtgcacaa atttgcatcc
    74521 ttgtttttac atcatcatag tttttagcta aatccatggc cttatcaact ataaaatttt
    74581 ctgtaatttc tccactagct agggcaaggt attctttttg aacgagtttt ttttcaaaca
    74641 agcttttaag attaatttgt gcttttttgt ttttggctac aagtataagt ccgcttgttt
    74701 ctttatcaag tctatgtgcc acgcaagctt ctttgcccca aagatgccaa atttcgtcgc
    74761 taagactgta tttacaatgt ctaccattgg gatgacttaa aattccactt tctttttcaa
    74821 gcacggcaaa atcttcattt tcaaagacaa ttttcacccc tttgggattg ttttcataga
    74881 tgataagttc tactaaacca tttaaaattt tatttttttc ttctattaaa attccatcac
    74941 aaaaaagtct tttcttatct atgagttttt gagcttcatt tatgctaatt tttaaattgt
    75001 ccataaggac ttgaaatgct ttttttccat tgtttgagag ttttattttt gtataagcca
    75061 tttaataact ttcttaggat aatttgatat aatccctact ttttaaaata taaaattata
    75121 gctaaaaagg tttcaaagat ggttgaaaga tatagcagag aaattatggc taaaaaatgg
    75181 gatatacaag caaagtatga tgcgtggtta aaagtagaat tagccgctgt aaaagcttgg
    75241 aataaacttg gtctcattaa tgatatagac tgcgaaaaaa ttcttaaaaa cgcaaaattt
    75301 gatattgcaa gaatagatga aatagaaaaa atcacaaaac atgatgttat tgcttttctt
    75361 acaagtgtaa gtgaaagttt aggagaagaa agtcgttttg tgcattatgc aatgacaagt
    75421 tctgattgta tagatactgc tgttgcttta cagataaaag agagtttaga gcttatttta
    75481 gaagatgttt ctttgctttt agaaacaatt aaaaaacgtg ctttggaaca taaaaatacc
    75541 ttaatggtag gaagaagtca tggaattcat ggagagccta ttacttttgg tttggtatta
    75601 gccatttggt atgatgaaat tttgcatgca aaagagcttt tagtgcatgc aaaagaagtg
    75661 ataagttatg gaaaaatcag tggtgctatg ggaaattttg ctcatgctcc tttagaattt
    75721 gaagaagaag tttgtaagaa tttaggtctt aaagctgctc ctgtttcaaa tcaaattatt
    75781 caaagagatc gttatgctca agtaatttct gctattgcaa ttttggcttc aagctgtgag
    75841 caaattgccg tagcaataag acattttcaa agaactgagg tttatgaggc tgaagagtat
    75901 tttagcgtag gacaaaaagg aagttcagct atgcctcata aaagaaatcc tgttttaagc
    75961 gaaaatatca caggactttg tcgtgtactt agatcttttg tagctcctgc tttggaaaat
    76021 gttgcgcttt ggcatgaaag agatatatct cattctagcg ttgaaaggtt tattttgcct
    76081 gatgctttta tcacggctga ttttatgctt atgcgtctta caaatgtgat tgacaagctt
    76141 ttgatctatc ctgaaaatat gatgaaaaat ttaaatctta caggtggact tgtgttttca
    76201 gggagagtgc ttttagaact tccatttaag ggcattagcc gtgaagaggc gtataaaata
    76261 gttcaaagaa atgctatgaa agtttgggaa gatttgcaaa atggtaaggc tggtatcaat
    76321 gaaaaaaatg aaagtttgtt tttgttggca cttttagcag atgaggactt aaggagaagt
    76381 ttaagcgaag aagatataag aaaatgtttt gattatagct actatacaaa aaatgttgat
    76441 gcaattttta aaagaacatt taaataaaaa gcaaggaaag caatgaaagt tattaaaaga
    76501 aatggtcgca cagaagaatt ggatgtcact aagattaaaa aatgtacttc tgatgctgta
    76561 aaagatttag aaggtgtgaa tttaagcgaa cttgaacttg atgcaaaaat acaatttcgc
    76621 gatggaattt caactgaaga aattcaaaaa actttaatta aaaccgcagt agataagata
    76681 gatattgatt gtccaaattg gacttttgtt gcggctagac tttttttatt tgatttatat
    76741 aaaagagtca atggtatgaa tcgttataat cacttgcgtg agtattttca aaagggtgaa
    76801 aaagaaggaa gaattttact tggtcttaaa gaaaaatatg atttagatga tttaaatgcc
    76861 tatattaaac ctgaacgtga tatgcaattt acttatcttg gtattaaaac tttatatgat
    76921 agatatttga ttaaagatag caaaggtatg cctatagagc ttcctcagca aatgtttatg
    76981 gctattgcaa tgtttttagc acaaaatgaa tttaactctc aagaatgggc aaaaaaattt
    77041 tatgatctta tttctaaatt tgaactcatg cttgcaactc cgactttatc aaatgcaaga
    77101 acaacacgcc atcagcttag ctcttgttat ataggctcaa cccctgataa tatcgaaggt
    77161 atttttgatt cttatcaaga aatgtctttg ctttctaaat ttggtggcgg tataggttgg
    77221 gattggtcta aagtgcgtgc catgggtgga agtatagatg gacataaaaa tgctgcagga
    77281 gggattatac cttttttaaa gattactaat gatattgctg tagctgtaga tcaactaggt
    77341 actagaaaag gagctattgc agtttatata gagccttggc acatggatat aggtgatttt
    77401 attgatttgc gtaaaaattc aggtgaagaa agacgccgtg cacacgagct tttccccgct
    77461 ttatggatca atgatctttt tatgaaaaga gtaagagcta atgataaatg gactcttttt
    77521 gatcctgcag atacggcgga tttatgtgat ttatatggtg aagcttttga aaaacgttat
    77581 gaaaaatatg aaaaagatga aagcattact aaagagatcg tagaagctaa agatctttgg
    77641 aagaaaattt tgctaaatta ttttgaaacg ggcttgccat ttttatgttt taaagatagt
    77701 gctaatagag caaatccaaa tgctcatgtg ggtatcatta gaagttcaaa tttatgtact
    77761 gaaatttttc aaaataccga gccaaattat tatcaaatca aagtagtttt tgaaaatggg
    77821 gatgaggttc attttgatga agatcaaaag gttatgattg atggaggata tgaaaaacca
    77881 gctaaaaaaa tctcaacttt agatagtatt aatggtaata aagtttatat agtagaaaag
    77941 tataaaaacg atggaaaaac ggcagtttgt aatctagcta gtataaatct tagcaaggta
    78001 tatactaaag aagatataga gcgtgttgtc ccaacggcta ttcgtatgct tgataatgtg
    78061 attgatttaa atttttatcc tcacagaaaa gtaaaagata ccaatttgaa atctcgtgct
    78121 ataggtcttg gagtgatggg tgaagcacaa atgcttgctg agactaagat tcattgggga
    78181 agtgatgaac atttaaataa aatcgatgag attatggagc aaattagctt tgaggctatt
    78241 aacgcgagtt caaatttggc acttgaaaaa ggatcttatg aagattttaa aggatcaaat
    78301 tggagcaagg ggatttttcc tattgatgta gcaagtccta aggctaaagc tttaacttta
    78361 agagaaggct tatttgatca aagtgaatgt gattgggcta aacttagaga aaaagttaaa
    78421 aaagatggta tgagaaatgg ttatttgatg gctattgcgc ctacttcttc tatttctatt
    78481 ttagtgggta ctacgcaaac tatcgaacct gtttataaga gaaagtggtt tgagcaaaat
    78541 ttaagcggta tgatacctgt ggttgtgcca aatttaagtc ttgatacttg gcaatactat
    78601 actccagctt atgaacttga tcaaaaaatt cttgtaaaag ctgcagctgt gcgtggcaaa
    78661 tggatcgatc aaggacaaag cttaaatatc tttttatcgc ttgataaagc aagtggtgga
    78721 tatttaaatg aaatttatca acttgcttgg gaacttggag taaagtctac ttattatcta
    78781 agaagtgaaa gtcctgatag tgaaaaagta aatgttacag atcgtagtat agaatgtgaa
    78841 ggttgccaat agcactaaaa acccaatgaa aagcattggg ttttttaaag attaagaatt
    78901 ataaatttcc ttatctagag cttttaaatt ttttgcagta caaagtgctg aagtcatagc
    78961 tcctgagaca ttacttgctg ttcttgccat atctataata ggatcaatag ctaaaatcag
    79021 acttaacatg acaaaattgt tgccaaatcc aatccctgct aacataatag aagctgccat
    79081 agttgcactt ccaggcactc cagctatacc taaggatcca ataacagcta ctaaaactat
    79141 cattaaagca aaagtaaaat caatgtatgt atgtgttgca aaagctacaa aaactgccgc
    79201 taaagccgga aagtatcccg cacagccatt aagtcctgtt gttgtgccta tggatgctac
    79261 aaaattagct atagcaggat taactccaaa tttattttgc aaagttgaag tcgtcatagg
    79321 taaagtactt aaagaagatc ttgagctaaa tgcaaatagc catacaggaa aggctttttt
    79381 tgcatatttt atagggttta atccttgaga aataagaagt aaaaaatgta ctccaaacat
    79441 tataaacata gctatataaa taagtatgat aaaaagtcca gctgttttga tagcttcaaa
    79501 accattgctt aaaagaacat tggccatcat gcaaactaca gcataaggca taaatctaat
    79561 aactgtagca gtcatgctca tcataatgtt ataaaaggtc aaaataaaat tctgaaaact
    79621 tttaaaggct tgttcatgtt cttctttttt agaaattttt ttagcactaa ttcctacaaa
    79681 aaaggaaaaa atgacaatag ctataatatt ttctttatta atagccgtaa cgatattgct
    79741 aggtattagt cctagtataa tatttgaaaa ggtttgaatt tcgcgaattt gcttatttcc
    79801 ttcatgtata gcaaaattac ttcctagatc aaaactataa cctaaaaata tacccaaagt
    79861 tgcagctatg gctgtactaa agagtatcca aaaaagactt attccaagca aagaagatat
    79921 tttgatattt ttatcaattt ctataataac ttttataata caaatgctta taagaggaat
    79981 aactagcatt tttataaaag ctacgaaaac agagcttata aatgcaaacc aatgttttgt
    80041 ttcactatac caaagaatat tgcttgtttc tttagcattt gtaaagctag ccaaatattg
    80101 taaagcaaga ccaaatccta aacccattaa aagtgcaaac agcatacgaa gagaaaagtt
    80161 gattttaata tcttgcattt ttttcaatgc gtaaaaaata acacaaagta tagcaagagt
    80221 agctatagta taagcttgtg aaagcattag aaagtcttga aaaaattgtt tattcataaa
    80281 aagtccttat aagaaactat aatcaagcac aaaatatatg aaaatatatt tgcataaagc
    80341 tcgattttat aaatggtagc acaaaaatat tttaaataag ataaaattag tatgatttat
    80401 tctatatctt tatgcaaaca atgctcaaat ataaatttgt gttcttgtgg taaagcttca
    80461 aacaaagcat ttgctaaatt tctaatctcc caaagggccg attttgaact acgtaaagaa
    80521 ataaaatttt gcaaacttct tgcattaatt gttaatgtaa gctcggtttt atagctttct
    80581 ggtaagcagt atttggctat atctaaactg atactttttt gtaaaatagt gcgtaaattt
    80641 tccaaagctt taatgcttgc attatcgact tcttcattgc cgcaaagcac aagatagcgg
    80701 cttgcatttt caaaatcccc tactttaaat tcattttcat tgcgaagttc ttttagagta
    80761 taacgcgtgc tttttacact agggctagta tgacgatgtc ttgcaacttc ttgtaagcaa
    80821 gctcttgaaa ttccttgtat gtaaaaagta tagtttaaat gctccaaagt tgaagcgtgt
    80881 ttgaatttat tacccacgcg atcgataagt tctttatctt tttcaccacc acaatcacct
    80941 ttttcaaaac tttgccaaca agttcttgtt gcatgagaac aaacagataa tggagtgtgg
    81001 aaaagtaagg tgatttgcat ggttattcct ttatgataaa atatttttta taattcttgc
    81061 attttttact taaaattcta atgaaataaa aagtttatta agttataatt agataaaaaa
    81121 taaggcttat tatcaatgaa acaaacaaaa tatatttttg taacaggtgg agttttaagt
    81181 tctttaggta aaggaatagc cgctgcttct atcgcaacac ttttaaaaaa ttcagggctt
    81241 aaagtgagtg ttttaaaagc tgatccttat atcaatgttg atccaggaac tatgagccct
    81301 tttgaacatg gagaagtttt tgttactgat gatggagcag aaacagatct tgatttaggc
    81361 cattatgagc gttttttaga tgagagttta tctcaagata ataacttcac cacaggacgc
    81421 gtttatcaaa gtgtcattga aaaagaaagg cgtggagaat atcttggcaa aaccattcaa
    81481 gtaatcccgc atatagtagg agaaatcaaa gatcgtatca aaaaagcagg agaaggcaaa
    81541 gatatactta ttgttgaaat tggtggaact gttggagata tagagggttt gcctttttta
    81601 gaagccattc gtgctttgcg tttagaagtg ggtaaaaata atgctatgaa tattcatctt
    81661 accttggtgc cttttatcaa agctgcaggt gagttaaaaa ccaagcccac tcaacatagc
    81721 gtaggtgagt taagacgcat aggtattagt cctgatatga ttatttgtcg tagcgagaaa
    81781 gcccttgata gggatttaaa agataaaatc gctatttctt gtggagtgga aaaaaattgc
    81841 gtgatagaaa gtgttgatgc agcaagtatt tatcaaattc cacttaattt cttaaaacaa
    81901 gatattttaa gccctattgc tgaaattttg gatttaaaaa atttaaaacc taatatggaa
    81961 aattgggatt ctttggtaaa aagagttata gcaccaagca atgaagttaa aatcgctttt
    82021 gtgggtaaat atgtggattt aaaagaaagt tataaaagcc ttactgaagc tattatacat
    82081 gcaggtgcag cactagatac taaagtagaa ttaaaatggg tagatagcga aaaacttgaa
    82141 aatttagaaa gcactgaagt atttaaagat gtgagcggaa ttttagttgc aggaggattt
    82201 ggatatcgtg gagtagaagg aaaaataaaa gctattcaat acgctagaga aaataaaatt
    82261 ccttttttag gaatttgttt aggcatgcag cttgctttga tagaatttgc tagaaatgta
    82321 ttaaaactta aagatgcaaa ttcaagtgaa tttgatgaga gatgtcaaaa tcctgtagtt
    82381 tatttgattg atgaatttat ggatactaat ggagaaaaac aaattcgcac tgcaaaaact
    82441 cctttaggcg gaactatgcg tttgggagct tataaatgcg atatcaaaga aaaatccctt
    82501 ttagcaaagg tttatgataa ggcaaaaagt gtaaaagaac gccaccgcca ccgctatgaa
    82561 gcaaatccaa aatatagagc agattttgaa aaacatagtt taattgtaag tggtgaaagt
    82621 aaagggttga tcgaagcggt tgagcttaat tcccaccctt ttttcttagc cgtacagttt
    82681 catcctgaat ttacatcaag acttgaacgt gttaatcctg tgatttgcgg ttttatcaag
    82741 gcggctataa actatgaaga taattgataa aaatgaaatt aaaaaaattt tggcttcacg
    82801 ctttgaaaag gatttgcata caaagctttg tgatttacct ttaccgtgct gtttaaagga
    82861 cacatataaa gcggctaatc gcatcaaaga ggctatagag aaaaatgaga aagttgctat
    82921 agtaggggat tatgatgttg atggaatcat ttcttgtgtt gttatggcgg aattttttga
    82981 tgatataggt tttgactata tagtaagaat tccaaatcgt tttaaagatg gatatggatt
    83041 aaatgctgaa attattaata agcttgatgt aaatttgata ataactgtag ataatggtat
    83101 agctgctttt gaagcggctg tactttgtaa agaaaaaaat atagatttga ttatcactga
    83161 tcatcatatg cctcaagata ctttgcctga tgcttttgct attatcaacc caaagcaaaa
    83221 agattgtgat tttccagaaa ttgaaatttg tggagcacaa gtggcatggt atttgatagc
    83281 ggctttaaag gaagtttgta aacttaatta tgatatgagc aaatttttag agcttttagc
    83341 gattgcaatt attgcagata tgatggagct tagagatcta aatcgtgctt tagtaaggcg
    83401 tggtatagag catatcaaca aatccaaaag agctgctttt aaggctatta agcattatta
    83461 tcaaaaagat aaatttgctc ttgataatat aggattttta attgctccgc ttataaatag
    83521 cgctggaaga atggatgatg caagtatttc ttatgaattt ttacacacta aagattttaa
    83581 caaagcccta gaatatctag agcaaattgt tagttttaac gaaagtcgta aagatgagga
    83641 aaagcagctt tttgaagaca gtttaaatca aattgatgaa aatgattctt gtattgtagt
    83701 atcgggttta aattggcatg aaggggtttt ggggattgta gcaagtcgtt tagctaaaca
    83761 tttcaataag cctgcttttg tattttcgca aaatgaagaa cacttaaaag gcagtgcaag
    83821 aagcgttggt aagattgata ttttgacttt aatttctaag acaaattcta tgttaagtaa
    83881 ttatggtggt cacaaaggtg ctgctggaat cagtctaaat tttgaaaatt ttgaacaatt
    83941 taaaaataaa attaaaaaag aatgctcaca aatttctgaa agtgagtttt tggatacaga
    84001 tgaaatttta ggaattttag agcctagtga aattgatttt gaaatacttg aaattttaga
    84061 atcttttgaa cctttcgggc ataaaaatcc acgacctttt tttgttttag aaaatctttg
    84121 tgtaaaaaat aaaaagcttt taggtaaaga tgaaaaacat ttaaagctta ttttaactaa
    84181 agaaaataaa actatagaag ctttattttt taattttgac aaagagcctg aattaaatca
    84241 aaatatcaat ttgcttggaa gtatttctaa aaatgaattt agaggattag taactccaca
    84301 atttgttatt aaagaaattt tataaaaatt tataaaattt ttatttatta atattatata
    84361 agttttatta gtgaaactaa atttaacaaa caaggagaga attgtgaaaa gactactatt
    84421 gtgtgtatta gtatttttat ctataggagc atgtatggca gaagctaaac caaagattgc
    84481 tattttagca acaggtggaa cgatagcagg ttctattgat agtgctgttg ctacaacagg
    84541 ttatacagca ggagttgttg gagtagatgt tttaattaaa gcagttccgc aaattcaaga
    84601 tttagctaat attagcgggg aacaaatagc aaatattgat agctcaaata tgcgtgatga
    84661 aatttggtta aagcttgcta aagaaatcaa taagcttttt gttgaagggg tagatggtgt
    84721 agtcataact catggtactg acaccatgga agaaaccgct tattttttaa atttaaccat
    84781 taaaagtgat aagcccgtgg ttttagttgg tgctatgcgt ccatcaaccg ctataagtgc
    84841 agatggtcca aaaaatcttt acaatgctgt agcattggct gctgataaag atgcaaaaga
    84901 taaaggggtt atggtagcca tgaatgataa aattttaagt gctaggggtg tggtaaaaac
    84961 tcatagttta aatgttgatg ctttctcttc tcctgatttt ggggatttgg gttatataat
    85021 agatggcaaa gtctttttct ataataatgt tgctaaagca cacacaaaaa atagtccttt
    85081 tgatgtaagc aaactaacaa gcttgccaaa agtagatata ctttatactt attcaaatga
    85141 tggtagtggt atagctgcaa aagctttgtt tgaaaatgga actaagggcg tagttgttgc
    85201 aggaagtggt gcaggaagta tacatgaaga tcaaaaaaat gtcttaaaag aacttataaa
    85261 aaaaggactt gatgttgttg taagctcaag ggttgtagca ggacgcgttg ttgtaagcga
    85321 ttcagataag aaattaggtt ttattagcgc tgaagattta aatcctcaaa aagcaagaat
    85381 tttgcttatg ttagcactta caaaaacaag tgaacctaaa aaaattcaag aatatttttt
    85441 aaaatattaa aaataagagt atttatagaa aaatgttata ttagacattt ttctataata
    85501 aataaacaca aactctttga aaaaaatatt taaatatttg tggttgctat cttaaatttc
    85561 aaacataatt tttatataaa ttctctagga tataaattta tttttgatag ttataaaaaa
    85621 ggttttattt aaggcaaaaa ttattttatt tttattaaag tataatttta aaaaactata
    85681 ttataattac tttaaattat ttcatgcata agaaaggtat aaaatgggta tttcaaggcg
    85741 aaactttatt aaaggcttag ctgcaacctc tgcagttgtt tctgtaaatc cacttatggc
    85801 agctggagaa accaaatttt atgacataaa aaaagttccc catgcaacac actttggtgc
    85861 attttgggcc gatgtaaatt cagaaggtca gatagtaaaa gttacccctc aacaatctga
    85921 taagcatcct tcggtaatca ctgatgctat tattgataga acttattcag atacaagagt
    85981 aaaatatcct tgtgtaagaa aaagtttttt agaaggtaat aaaaaaccta atttaagagg
    86041 taaagaaccc tttgtaagag taagctggga aaaggcttat gatcttattt tgcaaaattt
    86101 caaagaaacc cctattgaaa atttatttaa cgcaagttat ggtggttggg gtcatgtggg
    86161 tttgttgcat aactgtaact ctgtagcagg gagatttttc aatacagcac ttggcggaca
    86221 tattggtaca gatggagagt atagtaatgg tgcagctgga aaagtaaatg caagtattat
    86281 gggagattta gaagtttatt ctttgcaaac tgcccatgag caaattttaa aaaatactca
    86341 agtttatgta ctttggggtg ctgatcttta taaatgtaat caaatcgatt ttaaagtagc
    86401 aaatcgtgga aatgatgagt attataaaaa ataccgcaaa tcaaatatca aattcataag
    86461 tatagatcct caatacactc aaactgcaga aattttagat gcagagtgga ttaaaattcg
    86521 tccaaatact gatgtggctt taatgcttgg tatgatgaac tatctttata aaagtggaaa
    86581 atatgataaa aaattcatag aaaaatacac tgatggtttt gataaatttt taccttattt
    86641 actaggaaaa agcgatggta tagataaaac tcctgcatgg gcagcaaaaa tcacaggttt
    86701 agatgaaaaa gttatcactt ctttagcaga tacttttgta aaaaatcgca ctttcttagc
    86761 aggaaattgg gctatgcaaa gagcgcatca tggcgaacaa gcggattgga ctttgatggt
    86821 tttagcagcc atgatagggc aaatcggcct agcaggaggt ggatttggtt tttctatgca
    86881 ttattcaggt ggcggacaag cgttttcagg tgtgagactt ccagttggtt tgccacaagg
    86941 taagaacaat cttgatttta atattcctgc aagtagaatt tcagaagcta ttttaaatcc
    87001 aggaaagact attaaattta aaggtaaaga aatcactttc cctaaaatta aaatgatgta
    87061 tgtagtgggt gcttctattt taggacatca tccagatact aacgagctta ttcgtgcaat
    87121 tcgcacacta gatactgtta tcgtacatga gccttggtgg acccctatgg caaaaatggc
    87181 tgatattgtc ctaccttcaa ccacaacttt agaaagagat gatattagtt ttggcggatc
    87241 ttattctcaa gattatgttt atgcaatgaa aaaagttatt gagccagttt ttgaaagcaa
    87301 aaatgattat gatatttttg aagaaatggc aaaaagaata ggggaaagag aacataagaa
    87361 atttaccgga ggaaagacta aagagcaatg gcttgaagga ttttatggaa gaagtgattg
    87421 tccttattat atggaatttg ctgatttttg gaaacaaggt tttatccatt ttgaaccacc
    87481 taaagaagcc tatgattatg taagacattc agaatttaga gctaatccag tagcaaataa
    87541 acttgcaaca gaaagcggaa agattcaaat ttattctcct aaatttgaaa aatacaattt
    87601 agaagacttt aaagcacacc caacttggtt tgagccagca gaatggttag gaaatgaaaa
    87661 attagttaaa aaatatcctt tcca
//
LOCUS       DAPWAA010000002        53362 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.002, whole genome shotgun sequence.
ACCESSION   DAPWAA010000002 DAPWAA010000000
VERSION     DAPWAA010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 53362)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 53362)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..53362
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.002"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..1019)
                     /gene="pseI"
                     /locus_tag="RTF91_000098"
     CDS             complement(<1..1019)
                     /gene="pseI"
                     /locus_tag="RTF91_000098"
                     /EC_number="2.5.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid synthase"
                     /protein_id="HDZ4943041.1"
                     /translation="MQIGNFDTDKKVFIIAELSANHANSLKTALKSIKAAKEAGADAI
                     KIQTYTPNSLTLNSDKEDFIIKGGLWDKRKLYELYESAKTPYEWHSQIFETAQNEGIL
                     CFSSPFAKEDVEFLKRFDPIAYKIASFEVNDENFVRLVAKEKKPTIVSTGIATEEELF
                     RICEIFKEEKNPNLIFLKCTSAYPANIADMNLKGMVSLKQKFNVEVGLSDHSFGFLAP
                     VMAVALGARVIEKHFILDKNIESEDSKFSLDFDEFKTMVNAVRQAESALGDGRLDLDE
                     KALKNRIFARSLYASKDIKKGEIFSEENVKSVRPSFGLHPKFYQEILGKKATKDIEFG
                     NALNQG"
     gene            1162..2298
                     /gene="pseA"
                     /locus_tag="RTF91_000099"
     CDS             1162..2298
                     /gene="pseA"
                     /locus_tag="RTF91_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid biosynthesis protein PseA"
                     /protein_id="HDZ4943042.1"
                     /translation="MKFCKKCVMPDTKPDLHFDEDGICDACRSQEVKNQEINWQEREK
                     EFLELIKKYKKHPVYDCVIGVSGGKDSTFQVVKMLELGLNPLCVCFEPSVPTKIGRKN
                     LENLNHLGVDLIHIKRDPKVYKKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPL
                     IIWGESPQIEYGGPASSKDKNILGREWLEEFGGLLGNRASDMLGVNGISEKDLFLYTY
                     PSDEELKRVGVTGLFLGYYFKWDYKKILEISKKYGFLTLDHPVETTYENFENLDCYSN
                     HVHDYLKYCKYGFGRATDNACLDIRLGYISREEGIRLVQKYDGKPPKKAIKKYLEFSG
                     FSEEEFQKIVDSFTNKKIFKRDENGNFLRDYDGSLVRKDECILK"
     gene            2295..2900
                     /gene="hisH"
                     /locus_tag="RTF91_000100"
     CDS             2295..2900
                     /gene="hisH"
                     /locus_tag="RTF91_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDZ4943043.1"
                     /translation="MIALIDYKAGNLNSVSKAFEKIGARNFIAYDPKDLQKADKLLLP
                     GVGSFKEAMKNLKELGFIEALQDQVLVHKKPILGICLGMQLFLEKGCEGGVCEGLGFI
                     EGEVVKFEEGLNLKIPHMGWNDLEILKQEPLYKDIENKSDFYFVHSFYVKCKDEFISA
                     KTEYGHEFVASLQKDHIFATQFHPEKSQSLGLKLLENFVRL"
     gene            2901..3647
                     /gene="hisF"
                     /locus_tag="RTF91_000101"
     CDS             2901..3647
                     /gene="hisF"
                     /locus_tag="RTF91_000101"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDZ4943044.1"
                     /translation="MLKTRIIPCVLLKNGQLVKSVEFKNFRTIGHLISTVRIYNARNV
                     DELIILDIDASKSSEIDFESIEDLAKECFMPLTIGGGIKSLEDIQKILNLGADKISIN
                     SKALEDVNFISKAANRFGSQCVVCSIDVKRKGNKFFVYDRGNLLDISPLELALRYERK
                     GAGEILLTSVDFEGKAKGYDLELLEIFQNKLKIPLIINGGLGKPSDAIQALSLGADAL
                     AGAYIFHFSKYTPKDVKEELARQGFAVRLL"
     gene            complement(3612..4121)
                     /gene="pseH"
                     /locus_tag="RTF91_000102"
     CDS             complement(3612..4121)
                     /gene="pseH"
                     /locus_tag="RTF91_000102"
                     /EC_number="2.3.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase"
                     /protein_id="HDZ4943045.1"
                     /translation="MQNHQNTLVLKNYINLNYIEKEKIRKHRNHPEVKKYLYQTHFIS
                     KLEHKNFIKKLKHNTKKSYFCIIFDKQIIGNINFHIKENEIDFGFYANPFSKTLGIGR
                     ILEQIGIYYAFKIINIPVLSLEIFSNNTQVINLHYKFGFNITQEFFHKNQKIFKMSLK
                     QPNCKTLPS"
     gene            complement(4204..4692)
                     /gene="pseH"
                     /locus_tag="RTF91_000103"
     CDS             complement(4204..4692)
                     /gene="pseH"
                     /locus_tag="RTF91_000103"
                     /EC_number="2.3.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase"
                     /protein_id="HDZ4943046.1"
                     /translation="MIKLKNFTELNSQEINLVFKWRNQPSISQFMRTKQIDFEEHLNF
                     IKNLHKDPTKKYFLVFQNEQIIGVIDFVNITSHTCEFGLYAKPHLKGVGQILMDEIKK
                     YAFENLKVQNLKACVFKDNHKALRLYQKNDFIIYNEDENIFYVKLEKNNDYKIKDKWG
                     GV"
     gene            complement(4689..5513)
                     /gene="pseG"
                     /locus_tag="RTF91_000104"
     CDS             complement(4689..5513)
                     /gene="pseG"
                     /locus_tag="RTF91_000104"
                     /EC_number="3.6.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,4-diacetamido-2,4,
                     6-trideoxy-beta-L-altropyranose hydrolase"
                     /protein_id="HDZ4943047.1"
                     /translation="MKVLIRSDSSSQIGIGHIKRDLVLAKQYDDVSFACLPLKGSLID
                     EIPYPIYELGSESIYELINLIKEEKFELLIIDHYGISANDEKLIKLETGVKILSFDDE
                     IKPHHCDILLNVNAYSKSSDYEGLVPFKCEVRCGFSYALIREEFYQEAKENREKKYDF
                     FICMGGTDVKNLSMKIASELPKTKIISIATSSSNPHLKKLQKFAKLHNNIRLFTDHEN
                     IARLMNESNKLIISASSLVNEALLLKANFKAICIAKNQEQLANWLAKKGYEVEYKF"
     gene            complement(5497..6195)
                     /gene="pseF"
                     /locus_tag="RTF91_000105"
     CDS             complement(5497..6195)
                     /gene="pseF"
                     /locus_tag="RTF91_000105"
                     /EC_number="2.7.7.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid cytidylyltransferase"
                     /protein_id="HDZ4943048.1"
                     /translation="MKNLCIIPARGGSKRIPRKNIIDFLGKPLISYSIENALNSGIFD
                     EVILSSDDEEIIELALKYGAKAPFVRDKNLSDDYTTSTTVVQNAIKILQNQNQIYDNV
                     CCLYATAPLLSKDILKKAYEKFIQNKSKFLFSATEFNYPIQRAFYLNNNNQIYMFDEK
                     HYKSRSQDLEKAYHDAGGFYFGTSKAWLEEDFMFKPHSSAFILPRNLVCDIDTLQDLE
                     FAKMLYKANHESSY"
     gene            6276..7491
                     /locus_tag="RTF91_000106"
                     /pseudo
     CDS             6276..7491
                     /locus_tag="RTF91_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344700.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
     gene            7510..8580
                     /locus_tag="RTF91_000107"
     CDS             7510..8580
                     /locus_tag="RTF91_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDZ4943049.1"
                     /translation="MTAYLHIGTTNTGNQEKQGFLMQNEEKLLEKGYIYPKSLRVANR
                     HWALVDMVLELVQKEDILKERNVLSHIANERLLRTIENFKSESALHKDKKFIFSAEGI
                     VWDFSTKKHVEILEKIMRELGFTQIYIIVYFRDTLGYLNSHCSQDHKNNMGYYSADFA
                     PQDHPRKYIFDYKWICQTHAEVFGEDNLIVRLLREDYVGGTLLKDFVYHLGLEWDESF
                     VLKQTKNESFNLLGMELMSRLNQKDLKQDNLNSLLFMARRKFEGTKEKRLKFAVQKDI
                     AKAYVDYFASSLEWVKNKYFPHKNSLFTPINWEEYEQNYTLTNTVSEDWDNVADFIAQ
                     IIVSKNEIISSLKAQLELARKD"
     gene            complement(8577..8804)
                     /locus_tag="RTF91_000108"
     CDS             complement(8577..8804)
                     /locus_tag="RTF91_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDZ4943050.1"
                     /translation="MQEIKQFFINIERTDIDEGMQNLVSEDFIDSIDIMALVAEIEKF
                     YKKPLKAEFIAPENFESFENIKKMLELAMKD"
     gene            complement(8843..10351)
                     /locus_tag="RTF91_000109"
     CDS             complement(8843..10351)
                     /locus_tag="RTF91_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HDZ4943051.1"
                     /translation="MTTHIYDFLEKSLIKFSEKTAFTEPFAKERKEITYKNFDLFSKK
                     TASEILRTLGSNNSIQAPILIILPKGIDCLISFFGVALSGNFYTLLDEKSPKERVEKV
                     IEVLKPKLFITSKELKFHLNLPTLYTEDFENFNIDENLIQNAKAKHIDTNLLYVFFTS
                     GSTGIPKGVSIAHKSVIDYTFWVCGTFKFDENEILANQAPFYFDNSILDIFSSIKVGA
                     TLHLLPNHLFAFPNKILECLEQEKVSTIFWVPSVLIYFANTEALNNFSLNALKKILFC
                     GEIMPNKQLNIWRKHLPKSLFANLYGPTEITDVCSFYIINRDFKDEELLPIGKACKNT
                     ELLVFDENMNFISPKQIGVKGELFVRGTSLSLGYYNDKEKTKQAFLQNPLHDNYLDLL
                     YKTGDIVAYNEFGELLCYGRVDNQIKYMGHRIELGEIENVFNSHPSIKNSACIFKEDI
                     ICFYESKEEINFKAFLKDKLPSYMIPKNFIKLDKFQLNQNGKIDRKVLKELV"
     gene            10412..11623
                     /locus_tag="RTF91_000110"
     CDS             10412..11623
                     /locus_tag="RTF91_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDZ4943052.1"
                     /translation="MLINQTFEIDSCDDVELGIKRTSKLEYRISYDDEKDIKAIVFII
                     RGYGANANIYFLDSYRNYMAKNFDVVTVNVFYHCFCQRYSDVEKYSAFTMFTKEDLLN
                     LSQVLLEIGINVNVNLENANQCYELLDQNITALKSQGKLAQNYQAKFTSTFIPPNGDY
                     QNFGIMPAIDHINALKDLVKRFPKFADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVID
                     NSGSALPPLIYILEREMKNGCNYVFNDPNTSIECFLKTHWTRKENSPYFFANENYIIR
                     SLLNKDHLILQSQKNKNIIYTSYHSDKDPLTPANFKEQTMQILKVLGYDVTLNLIDES
                     KIDGKFIKNLDHGCGIPDKALFRKELPIMLEKLQGRKSFMQENSISYPCGKKVFIFKD
                     IGDKFELVIKD"
     gene            complement(11636..11857)
                     /locus_tag="RTF91_000111"
     CDS             complement(11636..11857)
                     /locus_tag="RTF91_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDZ4943053.1"
                     /translation="MTKTEFLEELKEAMHRDEGLNEEMLLDDIDEWDSLAFVSVMVLY
                     KNLFALKITADDLKNCQKVSDLIKLAKLD"
     gene            complement(11857..12918)
                     /locus_tag="RTF91_000112"
     CDS             complement(11857..12918)
                     /locus_tag="RTF91_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HDZ4943054.1"
                     /translation="MKTKFDKVKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKK
                     VIGLNTRYICDENTCVSDLGKHAANALLQGLNINKNSLNALIVVTQSPDFFMPSTACY
                     LHRLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLSKVLLICGDTLSKFIHPKNM
                     NLAPIFGDGVSATLLEKTDFNEAFFELGSDGKYFDKLIIPKGAMRIPRASIFNDDSLM
                     QTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVD
                     CIKEELKLNDDKVPNFIMEKYANLSACSLPTLLCELNTPKEFKASLSAFGAGLSWGSA
                     VLNFKNLYTKDILIYTKEK"
     gene            complement(12908..14470)
                     /locus_tag="RTF91_000113"
     CDS             complement(12908..14470)
                     /locus_tag="RTF91_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDZ4943055.1"
                     /translation="MNLFSPNLKRNELIKYAKELDFSKSQEFLINIHRNHAFEGIQSI
                     IAPFLHFANLKADFNFSSYDDSLSFDGFKETNLELLWLDLSRYKNNVQNFLEERLLEL
                     RKISQSPILVLSLGEFKTDKKNLNCEIFNVEKLIKEYFNEEDILDLAKEELTGSKLNN
                     KALIFLAQILGLSLIPALIKPALKALVLDLDNTLYQGILGEDGIDNLKLNPLHKALQE
                     KIKTFKKQGFLLALASKNEEKDAKKLFETRKDFILQWDDFDAKMINWEPKGENILKIA
                     KKFNINADAMLFIDDNIAELENAKFTGVKTVLCDENILYKIKLFPNLLKLSNTQEDQI
                     RAKDIAANALREELKSLSDEEYFKNLEISLYFSKNDIQNIPRISELLGKTNQFIANYT
                     RLNQEKVWQHMQNSLIVSVSMSDKLSDSGIIAIFVFSCKEEKLFVDDLCISCRALGRK
                     LEARMFFKAFELALKFFNLKNNNAKLCYQKGERNTPFLTFLEKISKEIKEKSALIPLQ
                     NLNFKGLIIHEN"
     gene            complement(14467..14883)
                     /locus_tag="RTF91_000114"
     CDS             complement(14467..14883)
                     /locus_tag="RTF91_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDZ4943056.1"
                     /translation="MLDKTLNLPIHHIGVACKNLEKERECFFKLGFYKEAEFIDEKQG
                     VKGEFIIPCDKTFPQYRFELLQNLNDKGPLDSYLKNNTKMYHLAYESKNIAQDLTLLE
                     QQGGLYIVPIIEASYFAKLCFIMMPNRLLIELVELK"
     gene            complement(14876..15769)
                     /locus_tag="RTF91_000115"
     CDS             complement(14876..15769)
                     /locus_tag="RTF91_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDZ4943057.1"
                     /translation="MTENIEKLFTAIALKNPIHAKYLKKIEFCQEDEKEFDQLISYYI
                     QDHISIEEQCDCYLLILNDTLEETKFFIENGSYRYSSFDEVKDKVYFNESYMKQYMIG
                     LALSSYVWIAHIKVRKYFSQYLQNFTPKTTYFEIGPGHGEYFARAVKSGKFSSFYGLD
                     ISPTSCELTQKMVKQQVGELIKKCDFLCQDFFTYDFDKKADLIVIGEVLEHVEKPLEF
                     LKRSKELLSKGGEIFATIPINAPAIDHIYLFSHPDEVKSLIEKSGLKLKTYECFMAND
                     YSLEKALKFKNAITMAVVLNA"
     gene            complement(15766..15996)
                     /locus_tag="RTF91_000116"
     CDS             complement(15766..15996)
                     /locus_tag="RTF91_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDZ4943058.1"
                     /translation="MEKQFYEILENILETKVDENTNLSMENCKNWTSLTHIDIIMSLE
                     EEFEIKFSKEDLNLLKSQNALLEKIQTLKATK"
     gene            complement(16025..16816)
                     /locus_tag="RTF91_000117"
     CDS             complement(16025..16816)
                     /locus_tag="RTF91_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside N(3)-acetyltransferase"
                     /protein_id="HDZ4943059.1"
                     /translation="MKYFLEYDGKKYSNVDLINAFYKLGIKKGDILCVHTELFNFGIP
                     LLPRNEFLQTILDCFFEVISKEGTLIMPTFTYSFCKNEVYDKINSKTKMGALNEFFRK
                     QAGVKRTNDPIFSFAIKGAKEELFLKDTTSCFGENCVYDVLTKENGKYITFGGQGHTL
                     THYAEEKFNVFYRYHKIFSGILIDEKNISYNKNISYYVRKLDISSKPNLTNIINIINN
                     TKNFKKINFTGDCISIYNAKEYVEILWKKLNTDQTILIENYGTIY"
     gene            complement(16813..18121)
                     /locus_tag="RTF91_000118"
                     /pseudo
     CDS             complement(16813..18121)
                     /locus_tag="RTF91_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344685.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
     gene            complement(18114..19244)
                     /gene="pseC"
                     /locus_tag="RTF91_000119"
     CDS             complement(18114..19244)
                     /gene="pseC"
                     /locus_tag="RTF91_000119"
                     /EC_number="2.6.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine transaminase"
                     /protein_id="HDZ4943060.1"
                     /translation="MLTYSHQNIDQSDIDTIVKALKDEILTGGKKVDEFEKALCEYVG
                     VKHACVLNSATSALHLAYTVLNVKEKIVLTTPLTFAATANTALMVGAKIEFIDIKNDG
                     NIDEKKLGARLAKDSANIGAISVVDFGGNSVEMDEISNLAKKYNIPLIDDASHALGSK
                     YKSEKVGKKADLSIFSFHPVKPITTFEGGAVVSDNEELIAKIKLLRSHGIIKKRLWDS
                     DMCDIGHNYRLSDVACALGINQLKKLDHNLQKREEIASFYDKEFEKNPYFSTIKIKEY
                     KKSSRHLYPILLFPEFYCQKEELFESLLHAGLGVQVHYKPIYEFSFYKKLLGEIRLEN
                     ADNFYKAELSIPCHQEMSLEDAKFVKDTLFNTLEKVKRSYCG"
     gene            complement(19245..20249)
                     /gene="pseB"
                     /locus_tag="RTF91_000120"
     CDS             complement(19245..20249)
                     /gene="pseB"
                     /locus_tag="RTF91_000120"
                     /EC_number="4.2.1.115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (inverting)"
                     /protein_id="HDZ4943061.1"
                     /translation="MFNGKNILITGGTGSFGKTYTKILLENYKPNKIIIYSRDELKQF
                     EMASIFNASCMRYFIGDVRDKERLSAAMHDVDFVIHAAAMKHVPIAEYNPMECIKTNI
                     HGAQNVIDACFKNGVKKCVALSTDKACNPINLYGATKLASDKLFVAANNIAGNKQTRF
                     SVTRYGNVVGSRGSVVPFFKKLISEGAKELPITDTRMTRFWISLENGVKFVLSNFERM
                     HGGEIFIPKIPSMKITDLAHALAPNLSHKIIGIRAGEKLHEIMISSDDSHLTYEFENY
                     YAISPSIKFVDKDNDFSINALGEKGQKVKDGFSYSSDNNPLWASEKELLEIINHTEGF
                     "
     gene            complement(20297..20857)
                     /locus_tag="RTF91_000121"
     CDS             complement(20297..20857)
                     /locus_tag="RTF91_000121"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDZ4943062.1"
                     /translation="MGLKADNWIRKMALEHKMIKPFCEANIGKGVVSYGLSSYGYDIR
                     VGREFKIFTNVNSTVVDPKNFVEENVVDFEGDVCIVPANSFALARTIEYFKMPDDVLA
                     ICLGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDE
                     KCDTTYKDKKGKYQAQTGITLPRILK"
     gene            21005..21460
                     /gene="accB"
                     /locus_tag="RTF91_000122"
     CDS             21005..21460
                     /gene="accB"
                     /locus_tag="RTF91_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDZ4943063.1"
                     /translation="MTKEEIKELVNLFAEANISKIKIKEQDGFEIELERDMCCDVPAP
                     VCPPVSAPQPINVSVVNEAQPSQSVKSNKPSINSPMVGTFYQAPSPGAAPFVKVGSTV
                     KKGDTIAIIEAMKIMNEIEAEFDCRIAEILVADGQPVEFGMPLFAVEKL"
     gene            21462..22793
                     /locus_tag="RTF91_000123"
     CDS             21462..22793
                     /locus_tag="RTF91_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDZ4943064.1"
                     /translation="MEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLK
                     YADASICIGKARSSESYLNIPAIITAAEIAEADAIFPGYGFLSENQNFVEICTKHNIK
                     FIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVILKA
                     AAGGGGRGMRVVEQEKELEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDS
                     FGNVIHMGERDCSMQRRHQKLIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFE
                     FLVDKNLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAEGYALPTQESIKLNGHS
                     IECRITAEDSKTFLPSPGKITKYIPPAGRNVRMESHCYQDYSVPPYYDSMIGKLVVWA
                     EDRNKAIAKMKVALDELLISGIKTTKDFHLAMMENPDFINNNYDTNYLARH"
     gene            complement(22824..23639)
                     /gene="salC"
                     /locus_tag="RTF91_000124"
     CDS             complement(22824..23639)
                     /gene="salC"
                     /locus_tag="RTF91_000124"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SalC"
                     /protein_id="HDZ4943065.1"
                     /translation="MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVL
                     KIDRNKALGILINEKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSK
                     NQSYEQFRTNFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINVNI
                     YLSNNPQTLENIKNTKKITLKSQNASLNTSNADPRLLGLLSQIPNGGFSPVLNGKNGY
                     ELYEVKNKDGAQTPEYKQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEYLR"
     gene            23703..25094
                     /locus_tag="RTF91_000125"
     CDS             23703..25094
                     /locus_tag="RTF91_000125"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDZ4943066.1"
                     /translation="MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIE
                     NTDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDEGKAYYCYM
                     SKEELDELRAKQEAAKERPRYDGRYREFKGMPPQGIEPVVRIKAPQSGEIVFEDGVKG
                     EVRFKAEDIMDDFIIARSDGTPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYQ
                     ALGFKIPKFFHVAMIHGEDGKKLSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGD
                     DEVFSLEDLKKIFDPYHINKSASCYNAKKLEWLNAYYIKTLPFEEINRQLKDLGFDLS
                     VYEKAGFLLDLLKERAKTLHDIIKGAKSIVNAPQNYDENAVQKFVNENNLELLKAFAN
                     TLKDQKTNKDFEGFTNDFLEKKEAKLKDLAQPIRIALTGSAVSPSIFEVLEFLGVNEC
                     KKRIENFLKVRGK"
     gene            25096..26331
                     /locus_tag="RTF91_000126"
     CDS             25096..26331
                     /locus_tag="RTF91_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDZ4943067.1"
                     /translation="MNLKEEALKYHLGGKIDIMPSKPIVTSYDLSLAYSPGVAEPCLE
                     IVRDDELAYTYTNKANLVAIVSDGSAVLGLGNIGAQASKPVMEGKACLFKKFANVNAY
                     DIEIDVHSVEEIVNFCKALAPTVGGINLEDIAAPKCFEIEAALQDLGIPVMHDDQHGT
                     AIISTAGLINAMEISGKKFKDIKIVVSGAGAAGIASAKMYRNLGVENIILVDSKGVIS
                     KDRNDLTPQKLEFAVDSKEKTLKEVLKGADVFLGLSRPKILDDEMILSMAKDPVIFAL
                     ANPIPEVMPEDVARLRKDAIVGTGRSDYSNQINNVLGFPFIFRGALDVRASKITENMK
                     VAAAKALADLAKLPVSDAVKKAYNLSTLEFGRAYVMPKPFDERVKAAVSTAVAAAAVK
                     DGVAKVKNFDEKAYFESLK"
     gene            26328..26954
                     /gene="upp"
                     /locus_tag="RTF91_000127"
     CDS             26328..26954
                     /gene="upp"
                     /locus_tag="RTF91_000127"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDZ4943068.1"
                     /translation="MKNVHCINHPLIEHKLGILRAKETKPFQFRMLIDEISSFLLFEA
                     SKDFFLKEIEISTPIQKTTIKKLDEKIMICPILRAALGMLESIFKMIPDASVGFLGFV
                     RNEETLKADFYFQKLPKDAKERTAIVIDPMFATGGTAIEACDFLKSQGIRKIKFISIL
                     AAPQGLQKFSQVHDDVEVFVACIDEGLNEKGYIIPGLGDAGDRVFNTL"
     gene            26960..27628
                     /locus_tag="RTF91_000128"
     CDS             26960..27628
                     /locus_tag="RTF91_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthetic enzyme MqnA/MqnD family
                     protein"
                     /protein_id="HDZ4943069.1"
                     /translation="MIFGKIDYINLLPLHIYLKKYPLPNGYKASMEYKKGVPSKLNKD
                     LFYRRIDAAIISSIESVRKKYKNLDLGICANKRVLSVLVEKNTLNAKDPNSATSNVLA
                     KVLKQDGKVIIGDKALKLYLKDPSKYIDLCTKWHEKTGLPFVFARFSCVQKKALYKRI
                     LKKFPQTKIKIPYYILQNYAKTRELDIKDVRCYLEIVYHKISTKEKVALKRFVKACKA
                     LNFA"
     gene            complement(27629..28279)
                     /locus_tag="RTF91_000129"
     CDS             complement(27629..28279)
                     /locus_tag="RTF91_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HDZ4943070.1"
                     /translation="MKNLNYGIIGLGKFGSVVADELIAGGHTVIVVDKDEEALKSIQN
                     PPSYAYILDSTNILALKEAGFHDVEVVIVSIGENVEKSILTLMALKDIGVKNIIAKAT
                     SNIHGQILSKLGATKIIYPEKESAKRLVKEFLTKDADYEVFDLSANTIRAIKINIDEK
                     LAGNSLKHVAQNMKVISYKKLNSDWEILPDLETTTVYSGDVVILLGTVKELREFEY"
     gene            complement(28290..29633)
                     /locus_tag="RTF91_000130"
     CDS             complement(28290..29633)
                     /locus_tag="RTF91_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HDZ4943071.1"
                     /translation="MKQFGLDRRTFKILLTGYIIIALFGALLLHSSWAHTTPIDFLDA
                     FFTSTSAVSMTGLVIKNTAVDFTLAGQIIILVLVQIGGLGYMGIGLFVYILIRKKVGF
                     NARNLLKESLFYPSMDGLFKFFKKVLLFIFTIELIGAILLTMRFALEMDFKKALWFGI
                     FHSISAFNNSGFTIFEHGLIAYKHDIAINLIITSLIIIGGLGYFVLVELYFFQRKKLQ
                     NLSLHTKMVVVASIFLIFSSTLIIFAFEYSNPQTIGHFSFFDKILSSYFIAINYRTAG
                     FNTLDMGHLHDASLFFGSLFMVIGGAPGGTAGGMKVTTVMVLLLYAYWSIRDGRVRTF
                     GHEIPAETISKAFIIAVGSAVYIVIAVILLSLLESKFDFIALLFETSSAFATVGISVG
                     NGGTLSLCALFSDPSKIIIIIMMLSGRIGVFAFLLSVFKQDKAIHLKFPEGKVNL"
     gene            29775..29850
                     /locus_tag="RTF91_000131"
     tRNA            29775..29850
                     /locus_tag="RTF91_000131"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:29808..29810,aa:Phe,seq:gaa)
     gene            complement(29969..30045)
                     /locus_tag="RTF91_000132"
     tRNA            complement(29969..30045)
                     /locus_tag="RTF91_000132"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(30009..30011),aa:Ile,seq:cat)
     gene            complement(30099..31199)
                     /locus_tag="RTF91_000133"
     CDS             complement(30099..31199)
                     /locus_tag="RTF91_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDZ4943072.1"
                     /translation="MFTLDRRILTHFDYMQPILFLPIILISFFLIFEANPFLAEKQFV
                     YACVGLLAFMFFFFFPVRKFIWIIPFVYWINIFLLLSVDIFGVEKLGAKRWLEIPFTH
                     FTIQPSEIFKPSFILMLAYLIYQNPPPKNGYKVKQFIKLSFYIILPFLLIAKEPDLGS
                     AMVLLLVGFGVLFIMGVHYKIWLSIIIAISVSSPIIYTHLLKPYQKQRIHDFISEKPS
                     YQVAQSMIAIGNGSLTGKSQDEATQTHFKFLPISTSDFIFAYMIERFGFIGGLILIIL
                     YILLIFHLLSLNYKLKDDYFARVAINCVALFIFIYAAVNISMTIGFAPVVGIPLPFFS
                     YGGSSFTIFMIFFGILQHLITFRYFWTDIKAK"
     gene            31278..32246
                     /locus_tag="RTF91_000134"
     CDS             31278..32246
                     /locus_tag="RTF91_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDZ4943073.1"
                     /translation="MQTFLVDENSRLDVFLAKKLNQSRNQVALLIEKDCVQVNDKIQD
                     KNSFKLKNGDVVFIASLNLCNEVKPQFEVDFDIDVLYEDEDLLVLNKPSNLVVHGASS
                     VKNATLVDWLIEKKYTLSNLGGEIRAGLVHRLDKDTSGAILIAKNNFTHQKLSEQLAD
                     KSMGRIYLALIDLPLKEDKIIVEKFLMRSPSNAIKKIAIDEENKFSKNAKSAFINVIK
                     TENLTLMAAKLFTGRTHQIRAHLASLNRHILGDNLYGYKGKYDCRIMLHAYFLYFIHP
                     RTKEQIFVKAPLMEDFKNIMFNQINLGENDEKISLEFLLEFFNSFA"
     gene            32191..33426
                     /locus_tag="RTF91_000135"
     CDS             32191..33426
                     /locus_tag="RTF91_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HDZ4943074.1"
                     /translation="MMKRFHLSFYLSFLTLLLSACSVSQINSLTSSKELTINESLPKV
                     ESLKSLSDMSNIAFEWEPLYNENIKGFYLYRSSDENPDFKLVGIIKDKFQTHYVDTKL
                     EPNTKYRYMMKSFNEQGQISEDGKIIEVNTTPRLQAVPFVQAVTNLPNRIKLIWRPHP
                     DFRVDSYIIERTKGDDKEFRKIAEVNNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKS
                     EPSQVVSSISKALPPQIEHLNASTDGSNKIILTWDSPAYEDFSYYKVYSTSSSFLPFS
                     VLAKTDKNSYEDIVEGAGKSKYYKVTMVDKDGLESPIPKDGVEGKTLDIPLAPSIILA
                     QSTSEGINLEWSDNDTRAVEYEVRRYGGEQNAVFKGIKEKRLKDVKVSPGVKYSYEVI
                     AIDSAGLRSKPSSKVKAAQ"
     gene            33426..34604
                     /gene="trmB"
                     /locus_tag="RTF91_000136"
     CDS             33426..34604
                     /gene="trmB"
                     /locus_tag="RTF91_000136"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDZ4943075.1"
                     /translation="MPNFKSKKIKEINLPYSKDDVEFLWLAKNDNVSLIYTKVQEESF
                     FLQIKRAQNGFVIKSDKHTKPSKIGYLQKALKIFKEGFCEDIINEAFRLKNNALIEKT
                     PFIVDNFDELLSKLQGKIYIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKL
                     AKAQSVDNILLIQSDARLLLSVLKSKSIEKIFLHFPVPWDKKPHRRVIGKDFCKECAR
                     VLTQNGRFELRTDSFEYFDFALKQFLTFPAPKFNLRKNENLEISSKYEDRWKKQEKDI
                     YDLWVWNLDEEYKNYELNEFNLSLIEFSKEDLRKIEQNFKNITIKKDDFFLHFESICK
                     QDESLLLKLAFGAFNKPEHCYLHVDKTIDFVFKEPFKIQENIKAMNELKEILKVQFKI
                     "
     gene            34674..35339
                     /locus_tag="RTF91_000137"
     CDS             34674..35339
                     /locus_tag="RTF91_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943076.1"
                     /translation="MPKLIQANKLTLGYDELVIKEASFAFKDDDFVFITGKSGSGKST
                     LLKSFYGDLEPLSGKLEVCGSLMNKIGNLELLKLRQRIGIIFQDYKLVQEYSVEKNVM
                     LPLMIKGYSKKVCHDQAAKLLKHVNLTFKADKLPNQLSGGEQQRVAMARALAHNPKLL
                     LCDEPTGNLDEYSSDIIWTLLKSARELLGTCVIVVTHRIPSNLRVDYRRFNIENGKMN
                     EIL"
     gene            35326..36132
                     /locus_tag="RTF91_000138"
     CDS             35326..36132
                     /locus_tag="RTF91_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDZ4943077.1"
                     /translation="MKFFKTHLSLILPLLFMMFAFEFILITNATLKHYEELVNKDYNI
                     IVVSKTELDQNVVKAKIPFFAGLKSLDPKDLIDRLKNDVSEKNLKVLKDSLPKFYALK
                     LNSLPDQNELNSIKDQLLNIVGVSKVETFSKTHDKIYSLLILMKFVFWLFLFIIILLA
                     FVLFLKQMRIWLYEHTDRIEIMCLFGAPFWFRSFMLYKVVVVDCFIAFIALLAFFTQI
                     FDLSIIQESLKAVDIIFPPINFILHLTLIFLATLFICLLCVNMVMFKVKR"
     gene            36129..37322
                     /locus_tag="RTF91_000139"
     CDS             36129..37322
                     /locus_tag="RTF91_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDZ4943078.1"
                     /translation="MRKNVLIFFCFFLLIDISLANAINEKTKSLEENKRIQEQLNKKL
                     EDLASDILNGEKSLKDLSLQIESLNSQTSKLEASAKAQNQELNSLTSQNQDLLKSKSN
                     MEGKLISLMAKDFAYDLPIPQGYIESEESFMAFEILGSLNKVLNEEIFKISKDYEGVS
                     RLIDDKQAQIKRINDSLKDYNTQLAKLQSLKQKQINEINKQKTDRAIYAKKLDDLQAQ
                     QEELRKTLNQLKIINNKENTNSNKNDAKIVKNNQQIRQLGSGYQGGSVKHYTGKKTIA
                     PLDSFTVKQKFGNYVDPVYNLKIFNENVVLRSNKSDAVVKNVLDGKIVFAKDTSMLAR
                     VVIVEHDNGIHTIYAHLDKIAPNIKVGKNIKKGAVVGRIKNDLTFEVTQKNFHINPLE
                     LISLN"
     gene            37376..38095
                     /locus_tag="RTF91_000140"
     CDS             37376..38095
                     /locus_tag="RTF91_000140"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDZ4943079.1"
                     /translation="MQERKRVLVKFSGEALAGENGFGIENSILKFIASEIKELIKNQI
                     EVGIVIGGGNIIRGVSAAKGGLIKRTSGDHMGMLATVINAIAIQEALESSGLEVRVQS
                     AIQMEAFCETYIMRRAQRHLEKGRVVIFAAGTGNPYFTTDTTAILRAVEIDAHMVIKA
                     TKVNGVYDKDPKQFDDAVFLNTLNYDEAMQDNIKVMDDTAIALAKDNKLPIVVCNMFE
                     EGNLLKIIQGDISLCSIVKNN"
     gene            38106..38330
                     /locus_tag="RTF91_000141"
     CDS             38106..38330
                     /locus_tag="RTF91_000141"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDZ4943080.1"
                     /translation="MDKRIEEVAAKALEKMGNDRYRLSLVVAKRAEQLANGAIPLVDF
                     DKNKNKLADIALYEIAENKITLEGLVETNR"
     gene            38314..40509
                     /locus_tag="RTF91_000142"
     CDS             38314..40509
                     /locus_tag="RTF91_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HDZ4943081.1"
                     /translation="MKPIDEELLLEQLIDNVKKCKDLEAAKALLFEICGHDAILEKAV
                     DYCIFCHEGQFRKSGEPYAVHPILAATLVGFLSGNKSNILAALLHDVIEDTNCTEEEL
                     KEQFGSEVLKLVLGLTKIIEIREDNLISSKSKKNLTKSALTFRNMLLASIEDVGVLIV
                     KLCDRLHNMFTLDILREDKQKRISEETLVVYAPIAHRLGISSIKNYLEDLSFKYLMPD
                     EYKLIDNYINSNNQEMQLGLNEFISKIELLFLSNGFRQGSFEIQKRIKHSYSIYLKMQ
                     RKGISIEEVLDLLGVRILVEKVSDCYLALGILHTHFNPLVSRFKDYIALPKQNGYQTI
                     HTTLFDAKSIIEAQIRTFDMHKIAEFGIAAHWKYKEDGSVVVPRLDWLTDISMQSINN
                     LENAEDYNAIELYEYAKDSLYVEDVAVYSPKGEIFTLPRGATVLDFAYEVHTKVGLHA
                     KSAYVNRMKVPLLTELKNGDIVRVVTSDDKFYRCSWIDSVKTGKAKASIREFCKQKIR
                     EINLASSINMLSFIFGVDKNRIENWIEKENLARRIRQVATDSAYLKDIVNSLKKYAKK
                     SYWFDKYEIKEQKIGNFTLYCNHKIANVDFDFCCHPKRGDAVLAFVKGGNAVVHHKLC
                     DRADKMIDNNQDMVFIKWDSNILKSYKLIFSLENKKGVLAEFLAFLAKMQINLLTINL
                     SSDLNSAVDYFEITMEIPDNINPDSVKDRLKSRCKILDFTSLNDAYKEG"
     gene            40521..41726
                     /locus_tag="RTF91_000143"
     CDS             40521..41726
                     /locus_tag="RTF91_000143"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDZ4943082.1"
                     /translation="MDIKKILAEVKRGCAELIDEERIENLIKNYYEKGKIFFIKAGFD
                     PTAPDLHLGHSVILTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLNKEQVLI
                     NAKTYETQVFKVLDKEKTQIKFNSTWLNELGATGIVELTSTFSVARMLERDDFTKRFK
                     DQSPISICEFLYPLLQGYDSVALKSDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIM
                     MPLLEGLDGVNKMSKSLNNYIGVTEKANDMYAKILSISDELMFRYYELLSQKSLEEIA
                     QIKRDIEQGSLHPKKAKENLALEITERFHSKEEADNAKSEFDRIHSQNALPSDMAEFE
                     IQGKIWLAKALVECGLESSTSAARRSISANAISVNSQKVSDGQMHLEQGEYILQIGKR
                     KFAKLKVKE"
     gene            41723..42814
                     /locus_tag="RTF91_000144"
     CDS             41723..42814
                     /locus_tag="RTF91_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDZ4943083.1"
                     /translation="MNLQPLQIGKHSIKYPIFQGGMGLGISWDKLASAVSLNGGLGII
                     SSVGTGYYEERKYVSKELNAKPYGSENFYSRKGLQVLINNARKVCGDAPLGCNILCAS
                     NDYARIARDACEVGFNIIVSGAGLPTNLPEFTADFPDVALVPIISSPKALKIICKRWQ
                     SRYNRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLEKLITPVVEEAKNWGSFPVIAAG
                     GIWDKKDIENAISLGANGVQMGTRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGY
                     PARGIRTNLLNLVDKRMGPKINCISNCVAPCGRGKEATKVGYCIADRLFDAWSGKRET
                     GLFFTGANGYRLDKLISVKELMEKLVNGE"
     gene            42814..44790
                     /locus_tag="RTF91_000145"
     CDS             42814..44790
                     /locus_tag="RTF91_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDZ4943084.1"
                     /translation="MANFFLFLVFFFTCLFGAYENELTNFDKNFIGSKSEVQIKFHHQ
                     LKSLYIQSVINEDEKTKIEILKRLIISSNTLNLDDKSYANELKESGISEASINALRKA
                     VIKDIKVQSIAQNTEKSTFEPIKTTQKNEKNSLNEQVKNTEKINTKTPQAQKSSIAPK
                     AKSDDKIYVLKSNKTNQGVEFELNANLNKDQLKSFALDEKGNYRFISDFEGVLEGGKK
                     EFKFDDYRLVISQFNPKTIRIVVYAKEKISIDISFKEERLIFSKETTTQKKIQQNSKT
                     SEKKQEQKTEVKTKVLETKKQDKKTNNKKENQEPLYVLDVDKIPNAVVLNLSDNLDEK
                     EIAVFDTKDQKFRYVVSFKGVLEGNRKSFTFGQNAITVTQYNPKTVRVVLSAPKEFKL
                     LKKLDNKNLTLGFYTQTTNQNANKKTTQSSSKTLNTNYKSGKLVVIDAGHGGKDSGAL
                     GDKGNLKEKDIVLSTALKLGNELKKRGYKVLYTRSSDKFINLRDRTKYANDKRADLFI
                     SIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDFEEINYFSKQSILNF
                     LNREKIVASNKLAIDVQKNILTQTRKKYKIIDGGVREAPFWVLVGAQMPAILIEIGYI
                     THPNEGKRIANKAFQDLLVKGVADGVESYFYNSQ"
     gene            44787..46631
                     /gene="mnmC"
                     /locus_tag="RTF91_000146"
     CDS             44787..46631
                     /gene="mnmC"
                     /locus_tag="RTF91_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HDZ4943085.1"
                     /translation="MKKANLIFKDNTPFSLDFDDFYFNSKDGLNESKFVYTHAFEWKS
                     QENFIIAESGFGIGLNFFLTLKRFLETTLSKRPKKLFYISIEAFYIEKEQLREIYQKL
                     GFYEEFKEFLEQFLKFYPKAKEGIYRFYFKDCFLDLVFEDIAILKELDFKADVWYLDG
                     FSPNKNLQMFDEKIIFEVARLSKKDMQICTFSSASFLQKNLKKYGFKVEKTKGFRKRE
                     MLRAYLENELEFKDKEAYFSRTFSSLKNKKVAIIGAGISSATLAYELSLRGFEVDVFE
                     KHLELGKGASGNESGILSSLILKPKVNLGEFSEFSFIEASRFYRQILDLNFKGVIEFA
                     HNDLMQERFDTQRENVLFKISKNQAFLEDGGVIFPKNLVKNLFEKSKACIYFNHEFQT
                     YEFKNECFALKFKNDIVKSDYAVLIYAMGADTKDFIFYDEMKLSKVRGQVTHLKPFLD
                     IQFPLSSKAYICPIKDDLQVIGASYDRLDVSLESKEEDNRQNIENITEFIDKNTKLEI
                     IGSKVGFRSYSSDRFMIVGNAYDEAFYKEEYKALLWTKNKEQKPAKISCNLYFNFAHG
                     SRGFSTSVLAARYLCALINNEPLCLEKKYIHAIHPARFLVRKLKKGLN"
     gene            46745..47884
                     /locus_tag="RTF91_000147"
     CDS             46745..47884
                     /locus_tag="RTF91_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HDZ4943086.1"
                     /translation="MIDYHKIESRLSTLEKLPSLKDNDSIANALEKSGFSRRDFMKWA
                     GAMTAFLALPASFTPMVAKAAELADRLPVVWLHMAECTGCSESLLRSDTPTIDSLIFD
                     YISLEYHETVMAAAGWQAEENLESAIQKHKNKYILMVEGGIPMGDTEHFLTIGAHGQT
                     GYELSKMASENALAIFAIGTCSSFGGIQAARPNPSNAQPLSKVTSKTVINVPGCPPSE
                     KNIVGNVLHYLLFGELPALDVYNRPKWAYGLRIHDLCERRGHFDAGEFVHAFGDEGAK
                     QGFCLYKVGCKGPYTFNNCSRERFNQHTSWPIQAGHGCIGCSEPNFWDTMGPFEEPMA
                     SHKFDTVFGLGADSVSDKIGIGVLTLTGVAIAAHAVISSMQKDKE"
     gene            47887..49602
                     /locus_tag="RTF91_000148"
     CDS             47887..49602
                     /locus_tag="RTF91_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HDZ4943087.1"
                     /translation="MSQKIIVDPITRIEGHLRVEVVVDDNNVVKEAYAGSTLWRGIET
                     IVKGRDPRDAGFMTQRICGVCTFSHYKAGIVAVENALGITPPLNALLTRTLMNAALFL
                     HDHIVHFYQLHGLDWADVVSALSADVKKASDEAFKYTPNPYATGADKLLEVQQRLKTF
                     VDKGNLGPFANAYYGHPTYRLNPEQNLIVLSHYLECLRIQRIIAQCMAIFGAKNPHPQ
                     SLTVGGVTCIMDLLDPARMGEYMVKFQEVQDFVNRAYYPDLIMAGKAYANEASVLNDI
                     GVNNLYTFKEFQIGRDEWLFESGIIKNGDLSKVYEVEEDKITEEATHSWYADNEPLHP
                     YDGKTNPNYTGLVDGESVDHHGNNVHSKVFDTKGKYSWIKAPRYEGNPMQVGPLANIV
                     VNYAKGNKNVVPVVDEFLKETGLPLNAVFSTLGRTAGRCIEAKIVANNALKAFNNLVE
                     NLKVDQSTCAPYVIDNSKEYKGRYMGHVPRGTLSHWCRIKNGVIENWQAVVPSTWNAS
                     PKDANGIGGSYEQCLIGLKIADVKQPLEIIRKIHSYDPCIACAVHVMDTKGNNLSEYK
                     VNVNL"
     gene            49613..50305
                     /gene="cybH"
                     /locus_tag="RTF91_000149"
     CDS             49613..50305
                     /gene="cybH"
                     /locus_tag="RTF91_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HDZ4943088.1"
                     /translation="MQNKKEKLQRKAEYEFSIGLRLTHWIRAIAIVILIGTGYYLSYV
                     FQSPISNGEPVNFMQAKYRLVHQAVGFVLIACIIFKVYLFFCDKVSAKERRSVWDIFN
                     IKLWIEQVKFYIFLGKHPHLKGVYNPLQFVTYFFFYLVMLGIILTGLILYTHTYHEGL
                     GGLLYHILRPLEAAMGGLADVRTYHRILMWVIMIFVPVHIYMAIFNAVKGKDGAIDAI
                     ISGYKFVKEEKH"
     gene            50302..50838
                     /locus_tag="RTF91_000150"
     CDS             50302..50838
                     /locus_tag="RTF91_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HDZ4943089.1"
                     /translation="MKFLVLGIGNIMFADEGLGVHLCKQLEKNYKFTHSDFTLDFVDG
                     GTLALQLSYIIARYDRLIVLDCIEAEGASIGDVFFFPYDAMPNKISWSGSAHEIEMLQ
                     TLQYMELAGDLPKTHILACVPKRIEAMSFKLSDELIQGAKIMEKTLLDFLSKEGFVYE
                     KIEDFSLQELADISYKNH"
     gene            complement(50835..51407)
                     /gene="recR"
                     /locus_tag="RTF91_000151"
     CDS             complement(50835..51407)
                     /gene="recR"
                     /locus_tag="RTF91_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDZ4943090.1"
                     /translation="MAKGLEKFNELVESFANLPTIGKKTAIRLAYHICTNNQIDGMKL
                     AHNIENAIRFIKPCEQCGALSENEFCEICSDKERDKNILCIVESPKDILTLEESKSYN
                     GFYFVLDELNEEKLEKLKQIILKLNTSELIFALTHSINSDATIFFIEDKFKHLNLSFS
                     KIAQGIPSGVNLENVDLISLNKAMNFRTKI"
     gene            complement(51407..52642)
                     /locus_tag="RTF91_000152"
     CDS             complement(51407..52642)
                     /locus_tag="RTF91_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDZ4943091.1"
                     /translation="MTKNYSIYTKLIVLFIVTFFLICVLFVVLLKIEENAYSEEETLK
                     QENLIKNLFISYENTSGVEIGAYLENSGFNAIRNPDLVKTIRDNGQSLFKADGKLCTL
                     SSLKYLNNLYFDIQCKDFHGLYKKNTSDRVYNLLLIGFFSFSLLVVFMYFSVLKSLEP
                     LKKLRKQVAEVANGEQPDFLDYQEDEVGKIAFEFQKAFKKNQELIQSRQLFLRTIMHE
                     LKTPIGKGRIISEMIKEDKQKKRLVTIFLHMDSLINELAKIENLFSKNYNLHFEPSHF
                     SAILEKAKKHLMRDDFNKVVKVDIRYDALINVDIEIFSVILKNLIDNALKYSNNGTCE
                     LVCCKECFAIKNPGKPLTEPIEHYLEAFTREKHNEVKGMGLGLYMVSEVCKLHNFNLI
                     YFYDDSKHCFKIFFGDKEK"
     gene            complement(52639..53310)
                     /locus_tag="RTF91_000153"
     CDS             complement(52639..53310)
                     /locus_tag="RTF91_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDZ4943092.1"
                     /translation="MINVLMIEDDPDFAQLLSEYLAQFNIKITNFENPKSALNVGIQG
                     YDCLILDLTLPGIDGLEACREIRQKNNIPIIISSARGDLSDKVVGLQIGADDYLPKPY
                     DPKEMYARIMSLIRRTKRVEHTNNENINSAFKIDERRHEITYQDKVLTLTPAEFEILE
                     YLIQQHGYSVSREQLVSRCKNLKDKDSKSLDVIIGRLRVKIGDSSKSPKHIFSVRGIG
                     YKLIG"
BASE COUNT        18560 a         7183 c         9103 g        18516 t
ORIGIN      
        1 ccttggttta aagcattgcc aaattctata tctttggtag cttttttgcc taaaatttct
       61 tgatagaatt taggatgtag cccaaaggag ggacgtacag attttacatt ttcttcacta
      121 aaaatttcac cttttttgat atctttgctt gcatataaac ttctagcaaa aatgcggttt
      181 ttaagagctt tttcatctag atctaatcta ccatcaccta aagcactttc agcctgtcta
      241 actgcattta ccatagtctt aaattcatca aaatcaagac taaatttact atcttcgctc
      301 tctatatttt tatctaatat aaaatgtttt tctatcactc tagcacctaa agctactgcc
      361 ataacagggg ctaaaaaacc aaaactatga tcgcttaagc ctacttcaac attaaatttt
      421 tgttttaaac ttaccatgcc ttttaaattc atatctgcta tatttgcagg ataggctgaa
      481 gtgcatttta aaaagattaa attaggattt ttttcttctt taaaaatttc acatattcta
      541 aaaagctctt cttctgtagc aatgcctgtt gaaacaatgg taggtttttt ttctttggca
      601 actaaacgca caaaattttc atcattaact tcaaaagaag cgattttata agctatagga
      661 tcaaagcgtt taagaaattc cacatcttct ttagcaaaag ggcttgaaaa gcatagtatg
      721 ccttcatttt gtgcggtttc aaagatttga gaatgccatt cataaggagt ttttgcactt
      781 tcgtaaagtt cataaagttt tcttttatcc caaagtccac ctttgatgat aaaatcttct
      841 ttatcgctat ttagcgtaag gctatttgga gtgtaagttt ggatttttat cgcatcagcc
      901 cctgcttctt tagctgcttt tatactttta agtgctgttt taagactgtt tgcatgattg
      961 gcactaagtt ctgctatgat aaaaactttt ttatcagtat caaaattccc tatttgcatt
     1021 ttatattctt gatattttta taatttttgt gaattatatc gttatttttg taaaaaaata
     1081 aatagttttc tttaataatt aatcatctga gccgattttg ttttataata actaagtttt
     1141 atttagtaaa ggtaatttga tatgaaattt tgtaaaaaat gcgtgatgcc agatactaaa
     1201 cctgatttgc attttgatga ggatgggatt tgtgatgcgt gtcgttctca agaagttaaa
     1261 aatcaagaaa tcaattggca agaaagagaa aaagaatttt tagaacttat aaaaaaatat
     1321 aaaaaacatc ctgtttatga ttgtgttatt ggggtaagtg gcggcaaaga ttctactttt
     1381 caagtggtta aaatgcttga gcttggactt aatcctttgt gtgtatgttt tgaacctagt
     1441 gttcctacaa aaatagggcg taaaaattta gaaaatttaa atcatcttgg cgtagatttg
     1501 attcatatca aacgcgaccc aaaagtctat aaaaaacttg ctcgtgaagc ttttataaga
     1561 acaggggata atgaatggca aaaccatttg ggaattttta cttctgttcc acgcatagcc
     1621 gtgaattttg gagtgccttt gatcatttgg ggagaaagtc cacaaataga atatggtgga
     1681 cctgcaagta gtaaggataa aaatatttta ggtagagaat ggcttgaaga atttggtgga
     1741 cttttgggaa accgtgcttc tgatatgctc ggtgtcaatg gtattagcga aaaagattta
     1801 tttttatata cttatccaag tgatgaagaa cttaaaagag ttggtgttac aggtctgttt
     1861 ttagggtatt attttaaatg ggattataaa aaaattcttg aaatttctaa aaaatatggt
     1921 tttttaactt tagatcatcc tgttgaaacc acctatgaaa attttgaaaa tttggattgt
     1981 tattctaatc atgtgcatga ttatttaaaa tactgtaaat acggttttgg tagagcaaca
     2041 gataatgctt gtttagatat tcgcttaggg tatatcagcc gtgaagaagg tatacgttta
     2101 gtgcaaaaat atgatggcaa acctcctaag aaagccatta aaaaatatct cgaatttagt
     2161 ggttttagcg aagaagaatt tcaaaaaatt gtggattctt ttaccaataa aaaaatcttc
     2221 aaacgtgatg aaaatggtaa ttttttaaga gattatgatg gttctttagt gagaaaagat
     2281 gagtgtattt taaaatgata gcattgattg attataaagc aggaaattta aattcagttt
     2341 ccaaggcttt tgagaaaata ggagctagaa atttcatagc ttacgatcca aaagatttac
     2401 aaaaagcgga taaattgctt ttgcctggtg taggatcttt taaagaggcg atgaaaaatt
     2461 taaaagaact tggctttata gaggctttac aagatcaggt tttagtgcat aaaaaaccta
     2521 ttttaggtat ttgtttgggt atgcagcttt ttttagaaaa gggttgcgaa ggtggagttt
     2581 gtgaaggatt gggttttata gaaggtgaag tggtaaaatt tgaagagggt ttaaatttaa
     2641 aaattccaca catgggttgg aatgatcttg aaattttaaa gcaagaacct ttatataagg
     2701 atatagagaa taaaagtgat ttttattttg tgcattcttt ttatgttaag tgtaaggatg
     2761 agtttataag tgctaagaca gaatacggac atgaatttgt tgcatctttg caaaaagatc
     2821 atatctttgc tacgcaattt caccctgaaa aaagccaaag tttgggttta aaacttttag
     2881 aaaattttgt aaggctttag atgttaaaaa ctagaattat cccttgtgtt ttgcttaaaa
     2941 atggacaact tgttaagagt gtagaattta aaaattttcg tactatagga catttaatct
     3001 caacagtgcg aatctataac gcacgcaatg ttgatgagct tattatctta gatatagatg
     3061 cttcaaaaag tagtgaaata gactttgaaa gcatagaaga tttggctaaa gaatgtttta
     3121 tgcctttgac tataggtgga gggataaaga gtcttgaaga tatacaaaag attttaaatt
     3181 taggtgcaga taaaatttct atcaattcta aagccttaga agatgtaaat tttataagta
     3241 aggcagcaaa tcgttttgga tcgcaatgtg tagtttgttc tatagatgta aaaagaaaag
     3301 gaaataaatt ttttgtttat gataggggaa atttgctcga tataagtcct ttagaacttg
     3361 ctttaaggta tgaaagaaaa ggagctggag aaattctttt aacttctgtt gattttgaag
     3421 gaaaagctaa aggatatgat ttagaacttt tagaaatttt tcaaaataaa cttaaaattc
     3481 ctcttatcat taatggggga ttaggcaagc caagtgatgc gatacaagct ttgagtttgg
     3541 gtgctgatgc cttagcgggt gcttatattt tccatttttc taagtatact cctaaagatg
     3601 taaaagaaga attagctagg caaggttttg cagttaggtt gctttaaact cattttgaaa
     3661 attttttgat ttttgtgaaa aaattcttgc gtgatattaa agccaaattt atagtgtagg
     3721 ttgatcactt gggtattatt gctaaaaatt tctaaagaaa gtacagggat gtttataatt
     3781 ttgaaagcat aataaatacc aatttgttct aaaattcttc ctatacctaa tgttttagaa
     3841 aatggattag cataaaatcc aaaatctatc tcattttctt tgatatgaaa atttatattc
     3901 cctataattt gtttatcaaa gatgatacaa aaataagatt ttttagtatt atgtttaagt
     3961 tttttaataa aatttttatg ttctaatttt gatataaagt gggtttgata gagatatttt
     4021 ttaacttctg gatgatttct gtgttttctt atcttttctt tttcaatata atttagattg
     4081 atataatttt ttaaaacaag ggtattttga tgattttgta ttgtaagaat aatattttta
     4141 ttttccacct tatattgaat aatttcaaaa ggatttgtcg ttagattgtt tttaaattta
     4201 tatctatacc cccccccatt tatcttttat tttataatca ttattttttt cgagtttcac
     4261 ataaaagata ttttcatctt cattataaat gataaaatca tttttttgat acaatcttaa
     4321 agccttgtga ttgtctttaa aaacacaagc tttaaggttt tgaactttta aattttcaaa
     4381 agcgtatttt ttgatttcat ccattaaaat ttgtcccacg ccttttaaat gaggttttgc
     4441 ataaaggcca aattcacatg tatgagatgt gatatttaca aaatcaatca cgcctatgat
     4501 ttgctcattt tgaaaaacta aaaaatattt tttagttgga tctttgtgta aattttttat
     4561 aaagtttaaa tgttcctcaa aatcgatttg ttttgttctc ataaattggc tgatactagg
     4621 ctgattacgc catttaaaaa ccagatttat ttcttgagaa tttagttctg tgaaattttt
     4681 aagttttatc aaaatttata ctccacttca tagccttttt tggctagcca gttagctagt
     4741 tgttcttgat ttttagcaat gcaaatagct ttgaaatttg cttttaaaag taaggcttca
     4801 ttgactaaag aacttgcact gatgatgagt ttattgcttt cattcattaa tcttgcaata
     4861 ttttcatgat cagtgaataa tctaatattg ttatgtaatt ttgcaaattt ttgtaatttt
     4921 ttaagatggg gattagaaga gctagttgca atgctaatga tttttgtttt tggtaattca
     4981 ctagcgattt tcatagaaag attttttaca tccgttccgc ccatacaaat aaaaaaatca
     5041 tatttttttt ctctattttc tttagcttct tgataaaatt cctctctgat taaagcatag
     5101 gaaaaaccac atcttacttc acatttaaaa ggtactaagc cttcataatc acttgatttt
     5161 gagtaagcat tgacatttag taagatatcg caatgatgag gcttgatttc atcatcaaag
     5221 cttagaattt taactcctgt ttcaagcttg atgagttttt catcgtttgc actaatacca
     5281 tagtgatcga tgatgagaag ttcaaatttt tcttctttga taagattgat aagttcataa
     5341 atactttcgc tacctagctc ataaatagga tagggaattt catcgatcaa agagcctttc
     5401 aaaggcaaac aagcaaagct cacatcatcg tattgtttgg ctaaaactag atcgcgctta
     5461 atgtgtccaa tgcctatttg acttgagcta tcgcttctaa taagaacttt catgatttgc
     5521 cttataaagc atttttgcaa attctaaatc ttgcagtgta tcgatatcgc aaactaaatt
     5581 tcttggcaat ataaacgcgc tagaatgagg tttaaacata aaatcttctt caagccaagc
     5641 tttgcttgta ccaaaataaa accctcctgc atcatgataa gctttttcta gatcttgtga
     5701 tcggctttta tagtgttttt catcgaacat gtaaatttga ttgttattat tcaaataaaa
     5761 agccctttgg atgggataat taaactcagt agcactaaat aaaaatttac ttttattttg
     5821 gataaatttc tcataagctt tctttaaaat atccttactt aaaagtggag cagtagcata
     5881 aaggcaacaa acattatcat aaatttgatt ttgattttgt aaaattttta tagcattttg
     5941 cactacagta gtgcttgtag tataatcatc acttaagttt ttatcacgca caaatggagc
     6001 ttttgcaccg tattttaagg ctagttctat gatttcttca tcatcgcttg aaagtatcac
     6061 ttcatcaaaa atacctgaat ttaaagcatt ttctatgcta taagagatta aaggtttgcc
     6121 tagaaaatca atgatatttt ttctaggaat tctttttgag ccaccacgtg cagggattat
     6181 acaaagattt ttcatagtta agccttattt tttgtgtttt attttaccaa aatttgagta
     6241 taattgtctt taaaaataca ataaaaggct taaaattgct tattaatcaa accttcgaaa
     6301 tcgattcttg tgatgatgta gagttaggta tcaaaagaac tagcaagctt gaataccgca
     6361 taagctacga tgatgaaaaa gatatcaaag ctatagtttt tatagtgggt ggttttgggg
     6421 ctaatgcaaa tatttctttt ttggactttg atagagagta tatcgctaaa aattttgatg
     6481 ttgttgtggt gtatgttttt taccattgtt tttgtgcaag aaaaagtatt gatgaaaaat
     6541 acaacccaaa gcttgtacct aacaaagatg atttagagcg tattaataat attttaaaaa
     6601 atattaattt atctcattta gttaccaatg aggataattt tgaacaaatc atccctttta
     6661 tagaacaaag agctggagaa attaaacaag caggttatgt tgataaaaat caaaaaatag
     6721 aacttttttg tgattttatc ccgcccaatg gggattatca aaactatggc attatgccag
     6781 ctattgatca tatcaatgct ttaaaagatc ttgttaaacg ctttccaaaa tttgcagatt
     6841 taccaaaaat ttatgggggg ggggtcatac ggaggatact tatccttgct tatagccaag
     6901 atagctcctt ggtatgtaga tggagtgatt gataattcag gggtttgttt gccatttttg
     6961 gcgcatattt taggaagaga tatgaaacaa ggagaattta ggcttaatgg agaaaattgt
     7021 tttcttaatg ttttttgcaa gaaatattgg acaagaaatg tagattctcc ttattatttt
     7081 ggagatgaga attatttaat tagagcagtt ttaaactcaa atcatcttaa aattcaagca
     7141 aatgcaaaca aaaatatcgt ttttgtaagc tatcatagta tgcaagatct aggtgcacca
     7201 gtgcaaaata aaatcgatct ttataaatgc tataaagagt taggatttga tgctacttta
     7261 catttagtaa aagatgaaaa tgatatagat ggtagattta taaaaagttt agaacatgga
     7321 cttagaatga ctgatagggc tttatttaga aaagaacttc ctataatgct tgaaaaatta
     7381 caaggaagaa aatcttttat gcaagaaaat tctatctctt atccttgtgg aaataaagta
     7441 ttcatgttta aagatacagt agataatttt gaattagtga taataaatta aaaaatataa
     7501 ggatataaaa tgacagcata tttacatata ggtactacta atacaggaaa tcaagaaaaa
     7561 caaggctttt tgatgcaaaa tgaagaaaag cttttagaaa aaggttatat ttatccaaaa
     7621 agtcttaggg ttgcaaatag gcattgggct ttggtagata tggttttaga gctagttcaa
     7681 aaagaagata ttttaaaaga aaggaacgtt ttaagtcata ttgcaaatga aaggcttctt
     7741 agaactatag aaaattttaa aagtgaaagt gctttgcata aggataaaaa atttattttt
     7801 tcagctgagg gtatagtttg ggatttttct actaaaaagc atgtagaaat tttagaaaaa
     7861 attatgagag agttaggttt tactcaaatt tatatcattg tgtattttag ggatactttg
     7921 ggttatttaa actcacattg ttctcaagat cataaaaata atatgggata ttattctgct
     7981 gattttgccc cacaagatca tcctagaaaa tatatttttg attataagtg gatttgtcaa
     8041 actcatgctg aggtatttgg agaagacaat ttgatagtaa gacttttaag agaggattat
     8101 gtaggaggga ctttacttaa agattttgtt tatcatttag gacttgaatg ggatgagagt
     8161 tttgttttaa aacaaaccaa aaatgaaagt tttaatcttt tgggaatgga gcttatgtca
     8221 agattaaatc aaaaagattt aaaacaagac aatcttaatt ccttgctttt tatggcaaga
     8281 aggaaatttg aaggtactaa agaaaaaaga ttaaaatttg ccgtgcaaaa agatattgct
     8341 aaggcttatg tggattattt tgcttcttca cttgaatggg ttaaaaacaa atattttccg
     8401 cacaaaaatt ctctttttac tcctataaat tgggaagaat atgagcaaaa ttatacttta
     8461 acaaacacag tgagtgaaga ttgggataat gtggctgatt ttatagcaca aattattgtt
     8521 tctaaaaatg agattatcag ctctttaaaa gcacaacttg aacttgcaag gaaagattag
     8581 tctttcattg caagttcaag catttttttg atattttcaa agctttcaaa attttcaggt
     8641 gcgataaatt ctgcttttaa tggtttttta taaaattttt ctatttcagc gactagagcc
     8701 atgatatcga tactatcgat aaaatcttcg cttactaaat tttgcatacc ttcatcgata
     8761 tctgttcttt ctatattgat gaaaaattgt ttaatttctt gcattttttc tcctttgatt
     8821 tttaaaatta taaaatattt atttaaacaa gttcttttaa aacttttcta tcaatttttc
     8881 cattttgatt gagttgaaat ttatcaagtt tgataaaatt ttttgggatc atatagctag
     8941 gtaatttatc ttttaaaaaa gctttaaaat taatttcttc tttgctttca taaaaacata
     9001 ttatgtcttc tttgaagatg caggcgctat tttttatact tggatgagaa ttgaatacat
     9061 tttctatctc tccaagttct attctatgtc ccatgtattt gatctgatta tctactcttc
     9121 catagcataa aagttcacca aattcattat aggcaactat atctcctgtt ttatataaaa
     9181 gatctaagta attatcatgc aaaggatttt gtaaaaaagc ttgttttgtt ttttctttat
     9241 cgttgtaata tcctaaagat aaagaagttc cacgcacaaa aagttcgcct ttaacaccta
     9301 tttgtttagg gcttatgaaa ttcatatttt catcaaaaac taaaagctct gtatttttac
     9361 acgctttgcc tataggtaaa agttcttcat ctttaaaatc ccgatttatg atataaaaag
     9421 aacatacatc agtgatttct gtaggaccat aaaggttggc aaataaactt tttggtaaat
     9481 gcttgcgcca aatgtttaat tgtttattag gcatgatttc accgcaaaaa agtatctttt
     9541 ttaaagcatt taagctaaag ttgtttaaag cttcagtatt tgcaaaataa ataagcactg
     9601 aaggtaccca aaatatagtg cttacttttt cttgctctag gcactctaaa attttatttg
     9661 gaaaggcaaa aagatggtta ggtaaaaggt gcaaagttgc tcctactttt atgcttgaaa
     9721 aaatatctaa aatgctatta tcaaaataaa atggcgcttg attagccaaa atttcattct
     9781 catcaaattt aaaagtccca cacacccaaa aagtataatc aatcacactc ttatgcgcta
     9841 tgcttactcc ttttggaatg cctgtgctgc cactagtaaa gaaaacataa agtaaatttg
     9901 tatctatatg ctttgcttta gcattttgga ttaaattttc atctatatta aaattttcaa
     9961 aatcttctgt ataaagtgta ggcaaattta aatgaaattt taattctttc gaagtgataa
    10021 aaagtttagg ttttaaaacc tctatgactt tttctactct ttctttagga cttttttcat
    10081 ctaaaagtgt ataaaaattt ccacttaatg ccaccccaaa aaatgaaatc aaacaatcaa
    10141 tccctttagg caagatgatt aaaataggtg cttggataga attattactt cctagggttc
    10201 ttaaaatttc actggctgtt tttttagaaa aaagatcaaa atttttataa gtgatttctt
    10261 ttctttcttt agcaaagggt tctgtaaaag cggttttttc actaaattta atcaaacttt
    10321 tttctagaaa atcgtaaata tgggttgtca tgattggcct ttttagtttt ttgtaatata
    10381 atatcgataa attaataaaa aaggccttta tatgctcatt aatcaaacct tcgaaatcga
    10441 ttcttgtgat gatgtagagt tgggcatcaa aagaactagc aagcttgaat accgcataag
    10501 ttatgatgat gaaaaagata tcaaagctat agtttttata ataaggggtt atggggctaa
    10561 tgcaaatata tattttttag attcttacag aaattatatg gctaaaaatt ttgacgtagt
    10621 gacggtaaat gttttttacc attgtttttg tcaaaggtat tcagatgttg aaaaatacag
    10681 tgcatttaca atgttcacaa aagaagatct gttaaattta tctcaggttt tattggaaat
    10741 aggtattaat gtaaatgtta atcttgaaaa tgcaaatcaa tgttatgaat tacttgatca
    10801 gaatattacc gctttaaaat cacaaggaaa attagcacaa aattatcaag ccaaatttac
    10861 ttcaaccttt atcccaccta atggggatta tcaaaatttt ggcattatgc ccgctattga
    10921 tcatatcaat gctttaaaag atcttgttaa acgctttcca aaatttgcag atttaccaaa
    10981 aatttatggg ggggggtctt atggaggata cttatccttg cttatagcca agatagctcc
    11041 ttggtatgtg gatggagtga ttgataattc aggatcagct ttgccgcctt tgatttatat
    11101 tttagaaaga gaaatgaaaa atggttgcaa ttatgtgttt aacgatccaa atacttcaat
    11161 agaatgtttt ttaaaaaccc attggacacg caaagaaaat tcaccttatt tttttgctaa
    11221 tgaaaattat atcattagat ctttattaaa taaagatcat ttgattttac aaagtcaaaa
    11281 aaataaaaat atcatttata caagctatca tagcgataaa gatcctttaa ctcctgcaaa
    11341 ttttaaagaa caaactatgc agattttaaa agttttagga tatgatgtga ctttaaattt
    11401 gatagatgaa agtaaaattg atggaaaatt tatcaaaaat ttagatcatg gttgtggaat
    11461 acccgataaa gctttattta gaaaagaact tcccataatg cttgaaaaat tacaaggaag
    11521 aaaatctttt atgcaagaaa attctatctc ttatccttgc ggaaagaagg tgtttatatt
    11581 taaagatatt ggggataaat ttgaattagt gataaaggat taaaacctta aggttttaat
    11641 caagctttgc taattttatc aaatcactta ctttctgaca atttttcaaa tcatcagctg
    11701 tgatttttaa cgcaaaaaga tttttataaa gcaccatcac agatacaaaa gctaagctat
    11761 cccattcatc tatatcatca agtaacattt cttcgtttaa accctcatca cgatgcatag
    11821 cttctttaag ttcttctaaa aattcggttt ttgtcattat ttctcctttg tgtaaattaa
    11881 aatatctttt gtgtataaat tcttgaaatt taacacagcg cttccccagc taagccctgc
    11941 accaaaagca cttaaacttg ctttaaattc ttttggagta tttagctcgc aaagtagggt
    12001 aggtagggaa caagcactta aattagcgta tttttccatg ataaaattag gaactttatc
    12061 atcattaagt tttaattctt ctttaatgca atcaaccaaa tacgcattag attgatgaaa
    12121 aagatgaaaa gcaatgtctt tttcatctac tttagaaaat tctaaaattt ctttaaagct
    12181 tttaggctcg cactctaaag ccatattgaa aatatttgct ccatccatat aaagattttc
    12241 taattgtcta aattcctcag tttgcatgag cgaatcatcg ttaaaaatac ttgccctagg
    12301 tattctcatt gcaccttttg gaatgatgag tttatcaaaa tatttcccat cacttccaag
    12361 ctcaaaaaaa gcttcgttaa aatctgtttt ttcaagcaaa gtcgcactca ctccatcgcc
    12421 aaaaatggga gctaaattca tatttttagg gtggatgaat ttgcttaaag tatccccgca
    12481 aatgagtaaa actttgctta acccactttg tattaaagaa tgtgcgacaa acaagccgta
    12541 taaatatccc gcacaagctt gtcctagatc aaaagctatg gttttagaac ttaaatttaa
    12601 aagtcggtgt aaataacaag ctgtagaagg catgaaaaaa tcaggacttt gagttactac
    12661 aatgagtgcg ttaaggctat ttttatttat atttaaacct tgcaaaaggg cgtttgctgc
    12721 gtgttttcca agatcgctta cgcaagtgtt ttcatcacaa atataacgcg tgtttaaacc
    12781 tatgactttt ttcattcttt taagagtttt tatatcgttt gaaaaaacgc tttctagttc
    12841 atcatcaatg caaattttat gttcaggtac acttacgcaa atgcctgaaa tcttaacttt
    12901 atcgaattta gttttcatgg attataagtc ctttgaagtt taaattttga agtggaataa
    12961 gagctgattt ttctttgatt tctttagaaa ttttttctaa aaaagttaaa aaaggtgtat
    13021 ttctttcgcc tttttgataa caaagctttg cattattatt tttaagatta aagaatttca
    13081 aagctaattc aaaggcttta aaaaacattc tagcttcaag ttttctacct aaagctctac
    13141 aagaaataca aagatcatca acgaataatt tttcttcttt gcaagaaaaa acaaaaatag
    13201 cgataatccc actatcactt aatttatcac tcatactgac acttacaatg agtgaatttt
    13261 gcatgtgttg ccagactttt tcttgattta agcgtgtgta attagcgata aattgattgg
    13321 ttttgcccag aagttcgcta atgcggggga tattttggat gtcatttttg ctaaaatata
    13381 agctgatttc aagattttta aaatactctt catcgcttaa gcttttaagt tcttctctta
    13441 aagcatttgc tgctatatct ttggcacgaa tttgatcttc ttgagtgttt gaaagtttaa
    13501 gaagattagg aaaaagtttg attttataaa gtatattttc atcacacaaa actgttttaa
    13561 cgcctgtaaa tttagcgttt tcaagttcag cgatattatc atctataaaa agcatagcat
    13621 cagcatttat attaaatttt ttagcaattt ttaagatatt ttcacccttt ggctcccaat
    13681 taatcatttt agcatcaaaa tcatcccact gtaagatgaa atcttttctt gtttcaaaaa
    13741 gtttttttgc atctttttct tcattttttg aagctagggc aagcaaaaat ccttgttttt
    13801 taaaagtttt aattttttct tgcaaggcct tgtgcaaagg atttagcttg agattatcga
    13861 tgccatcttc gcctaaaatt ccttgatata aggtattatc aagatcaagc acaagggctt
    13921 taagagcagg ttttatcagt gcagggataa ggctaagccc taaaatttgc gctaaaaaaa
    13981 tcaaagcttt gttattaagt ttggagcctg tgagttcttc tttggctaaa tctaaaatat
    14041 cttcctcatt aaaatactct tttatgagtt tttctacatt aaaaatttca caattcaaat
    14101 ttttcttatc tgttttaaat tctcctaaac taaggactaa aataggactt tgtgaaattt
    14161 ttcttaattc taaaagtctt tcttctaaga aattttgaac attattttta tagcgactta
    14221 aatccagcca taaaagttct aaatttgtct ctttaaaacc atcaaaactc aagctgtcat
    14281 cataagagct gaaattaaaa tcagccttta aattagcaaa atgcaaaaaa ggagcaatga
    14341 tgctttgtat tccttcaaaa gcatgatttc tatggatatt gataagaaat tcttgacttt
    14401 tgctaaagtc taattctttg gcgtatttta tcagttcatt acgttttaaa ttgggtgaaa
    14461 agagattcat tttaactcca caagctcgat taaaagccta tttggcatca tgataaaaca
    14521 aagtttagca aaatagcttg cctctataat aggaacaatg tataaacccc cttgttgttc
    14581 taaaagagtt aaatcttgtg cgatattttt actttcatag gctaaatgat acattttggt
    14641 attatttttt aggtaactat ctagcggacc tttatcattt aaattttgca aaagttcaaa
    14701 tctatattgt ggaaatgttt tatcacaagg gatgataaat tcgcccttta cgccttgttt
    14761 ttcatctata aattccgctt ctttataaaa acctagttta aaaaaacatt ctctttcttt
    14821 ttctaaattt ttacaagcca cacctatatg atgaatgggt aaatttagtg ttttatcaag
    14881 catttaatac tactgccata gtgatagcat ttttaaattt caatgctttt tctaagctat
    14941 aatcatttgc cataaaacat tcataagttt taagttttaa gcctgatttt tctatcaaac
    15001 ttttaacttc atcaggatga gaaaataaat aaatatgatc aatagcaggt gcgttgatag
    15061 ggatagtagc aaaaatttct ccacctttac taagaagttc tttggatctt ttaagaaatt
    15121 caagaggctt ttctacatgt tctaaaactt ctccaatcac tatcaaatca gcttttttat
    15181 caaaatcata agtaaaaaaa tcttgacata aaaaatcaca ttttttaatc aattctccta
    15241 cttgttgttt taccattttt tgagtgagtt cgcaacttgt tggagagata tctagtccat
    15301 aaaaagaaga aaatttacca cttttaaccg ctcttgcaaa gtattctcca tgaccaggac
    15361 caatttcaaa ataagttgtt tttggggtga aattttgtaa atattgcgaa aaatattttc
    15421 tcactttaat gtgggctatc caaacataag aagaaagagc taaacctatc atgtattgtt
    15481 tcatatagct ttcattaaaa taaactttat ctttaacttc atcaaagcta gaataacgat
    15541 aagaaccatt ttctatgaaa aattttgttt cttctaaagt atcattaagg attaataaat
    15601 agcaatcgca ttgttcttcg atgctgatat gatcttggat ataataagaa atgagctgat
    15661 caaattcttt ttcatcttct tggcaaaatt cgattttttt gagatatttt gcgtgaatgg
    15721 gatttttaag agcaatggct gtgaatagtt tttcaatatt ttctgtcatt ttgtagcctt
    15781 tagggtttga attttttcta gtagagcatt ttgcgatttt aagagattta aatcttcttt
    15841 gctaaatttt atttcaaatt cttcttctaa gctcatgata atatcaatat gggttaaaga
    15901 agtccagttt ttacaatttt ccatgcttaa atttgtattt tcatctactt tggtttcgag
    15961 tatattttct aaaatttcat aaaattgttt ttccatcatt taactttctt aagagtattg
    16021 aaaattaata tattgtacca taattttcta ttagaattgt ttgatctgta tttaattttt
    16081 tccataaaat ttctacatat tctttagcat tataaatact tatacaatct cctgtaaaat
    16141 tgattttttt gaaattttta gtgttattga taatattaat aatgttagtt aaattgggct
    16201 ttgaagatat gtcaagtttt ctaacatagt aactaatgtt tttgttgtat gatatatttt
    16261 tttcatcgat taaaattcca gagaaaattt tatgatatct ataaaataca ttaaactttt
    16321 cttctgcata atgtgttaat gtatgtcctt gccctccaaa ggttatatat tttccattct
    16381 ctttggttaa aacatcataa acgcaatttt ctccgaagca acttgttgta tctttcaaaa
    16441 ataattcctc ttttgctcct tttatagcaa aggaaaatat aggatcgttt gtgcgtttta
    16501 ctcctgcttg ttttctaaaa aattcattta atgcccccat ttttgtttta gaatttattt
    16561 tatcataaac ctcatttttg caaaaactat aagtaaaggt tggcatgatt aaagttcctt
    16621 ctttgcttat tacttcaaaa aagcaatcta gtatagtctg taaaaattca tttctaggga
    16681 gcaaaggtat gccaaaatta aaaagttcgg tgtgcacgca taaaatatcg ccttttttta
    16741 tacctaattt ataaaaagca tttattaaat caacattaga gtatttttta ccatcatatt
    16801 ctaaaaaata tttcatttta ctagtccata aatttttaat ttttgcaaaa gctctttaaa
    16861 ttcataagct tgcatattta agatattggc tatatcgatg atatcatttt gcccgtcaca
    16921 gtaagctaaa aaattacaag ccaaaggaat gttattagca gtgctaagag tgtgataaag
    16981 ttctcttttg ccaagattag gttcgcatat tatggtgttt tcatatacgc aattaatttc
    17041 tagatttaaa atcatttctt gcatgctttt aagtccgccc attaaaccct tagctgaaat
    17101 aaaatttaaa tcatcttttg aagtgtgata ttgcttatat tctagatatt ttgtacgaca
    17161 cactcctact atgccaagat ttacaagcgg ggcattgtat tgtctttcat cgcttccacg
    17221 atctaaaaaa ctaaatgctt tgaaattttc tttattttta agcgtatgca aggcgacttt
    17281 atcgcttaga gtgttttctt tgggcgtgtg tataagtgag taggcatgat catcgcctaa
    17341 gcaagaaagc acaaagcctg ctttaatata ttcttttaaa tgctctaaat gtttgctaag
    17401 atagactata gagcctatgg tttcagggat gattacaaag cggtaattat atcttctttc
    17461 ttttaaaccc aaaagccatt ttgctaaaaa aattgccacc acagggccac taagctcatt
    17521 atttgccatg gaggggtggc aaagataagt tgaaagtaaa atttcatctt tggagttttg
    17581 tgtactaggt agagtaaaat cagcataatt taaagtccca tttttatcgt gttttgtatc
    17641 gataaagact ttgtatttgc cttttttgag cttttttctt tcattatgtg cgatacaaaa
    17701 tccccaacgc ttcttatagt aacttgttac ataagggata gcatcaggca tttcttctat
    17761 ggagtaaaga tgattttgaa gtttttccag ttctatttct tgattgattg cctcactata
    17821 gtttagaaga tgtaaattgt gctttttaaa atcacaaatt ttatctcctt ttggagtgat
    17881 gatgtaggct tctttaacat tccattcatc agggactatc cagtcaaaaa cctttgtgcc
    17941 actttttata gagtgaaatt ggagtatacc ccccccctag agttttattt aaaatttcta
    18001 agctatcctt aaaaccttgc cctgtgatgc ttctaggaat aggaaaaagt tccttaacaa
    18061 gttcatacat agctttgccg gtttgactaa aatcttggct tctaaagtct aatttatcca
    18121 caatagctcc ttttaacttt ttcaagagtg ttaaataaag tatcttttac aaattttgca
    18181 tcttctaagc tcatttcttg atgacaaggt atgctaagtt cagctttgta aaaattatct
    18241 gcattttcaa gtcttatttc tcctaagagt tttttataaa aactaaactc ataaataggt
    18301 ttataatgca cttgcacgcc aagtcctgca tgaagcaagc tttcaaaaag ttcttctttt
    18361 tgacaataaa actccggaaa aagtaaaata ggatataaat gccttgaact ttttttatat
    18421 tctttgattt ttatcgtgga aaaataagga tttttttcaa attctttatc gtaaaaactt
    18481 gcaatttcct ctcgtttttg aagattgtga tctagttttt taagttggtt tatccctaaa
    18541 gcacaagcga catcacttaa gcggtaatta tggccaatat cacacatatc gctatcccaa
    18601 agcctttttt taatgatacc atgacttctt aaaagtttga ttttggcgat aagttcttca
    18661 ttatcactta ccacagcccc accttcaaaa gtggtaatgg gcttaacagg atgaaaagaa
    18721 aatatagaaa gatctgcttt ttttcctact ttttcactct tatatttaga gcctaaagca
    18781 tggcttgcat catcgattaa agggatattg tattttttag caaggtttga aatttcatcc
    18841 atttcaacgc tattgcctcc aaaatccacc acgctaatag ctcctatatt tgcactgtct
    18901 tttgcaagtc ttgctcctaa ttttttttca tcgatattgc catcgttttt aatatcaata
    18961 aattctatct tagccccgac cattaaggct gtattagctg tagcagcaaa ggttaaagga
    19021 gtggttaaaa cgattttttc tttgacattt aacactgtat aggcaagatg aagagctgaa
    19081 gtagctgaat ttagtacgca agcgtgtttt actcccacat attcacaaag ggctttttca
    19141 aattcatcaa cttttttacc tcctgttaaa atttcatctt ttaaggcttt tacaatggta
    19201 tctatatcgc tttgatcaat gttttgatga gaataagtaa gcatttaaaa accttcggtg
    19261 tgattaatga tttctaaaag ttctttttcg cttgcccata aagggttgtt gtctgaacta
    19321 taagaaaaac catcttttac tttttgtcct ttttcgccta aggcattgat gctaaaatca
    19381 ttatctttat ctacaaattt aatactaggg cttatagcat aatagttttc aaattcatag
    19441 gttaaatgac tatcatcgct tgaaatcata atttcgtgaa gtttttctcc tgctcttatg
    19501 cctatgattt tatggcttaa atttggagct aaagcatgag ctagatctgt gattttcatt
    19561 gaaggaattt tagggataaa aatttcacct ccatgcattc tttcaaaatt actcagtaca
    19621 aattttactc cattttcaag actgatccaa aaacgagtca ttcttgtatc agtgatagga
    19681 agttctttag ccccttcact gatgagtttt ttaaagaaag gaactactga tcctcttgag
    19741 cctacgacat tgccatatct tgtaacacta aagcgtgttt gtttgtttcc tgctatgttg
    19801 tttgcagcga caaaaagctt atcacttgct agtttggtcg caccgtataa atttatagga
    19861 ttacaagctt tgtctgtgct tagggcaaca cattttttaa ctccattttt aaaacaagca
    19921 tcgatgacat tttgcgcgcc gtggatattg gtttttatac attccatagg gttatattca
    19981 gcaataggaa catgtttcat tgcagcagca tgtataacaa aatccacatc atgcatagca
    20041 gcacttaaac gctctttatc tcttacatct cctatgaaat aacgcataca agaagcatta
    20101 aaaatgcttg ccatttcaaa ttgtttgagt tcatcacgag aataaatgat gattttatta
    20161 ggcttgtaat tttctagcaa aatcttagta taagtttttc caaaagaacc tgttccacct
    20221 gtgattagga tattttttcc gttaaacatt ttgccttcct ttgtttaatt ttttaaaatc
    20281 aaagcaacaa gtgttcctat tttaaaatcc ttggcagggt tatgccggtt tgagcttggt
    20341 atttgccttt tttatcttta taagtggtat cgcatttttc atcgccttgc aaaaacaaca
    20401 cttgtgctat gccctcattg gcataaattt ttgcaggcag tggggtggta tttgaaattt
    20461 ctatagtgat atgcccttca aaacctggtt caaaaggagt aacatttaca ataatgccac
    20521 atcttgcata agtgcttttt ccaagacaaa tggctaaaac atcatcaggc attttaaaat
    20581 actctatagt tctagctaaa gcaaaagaat ttgcaggaac tatacacaca tcgccttcaa
    20641 aatccactac attttcttct acgaaatttt ttggatctac tacggttgaa ttgacattag
    20701 taaaaatttt aaactcacgt cctacgcgta tatcataacc atagcttgaa agtccgtagc
    20761 ttaccacgcc tttacctata tttgcttcgc aaaacggttt gatcatcttg tgctctagtg
    20821 ccatttttct tatccaatta tctgctttta agcccatctt taacctttta gtatttgtaa
    20881 atttttgcaa ggattataac ctaaaaaatc tatatttttt atgatttttt tcttttttaa
    20941 agttaaattt caagtttttt tatataatac aagattaagt tcttaaattt tgtaggagaa
    21001 ttttatgaca aaagaagaaa ttaaagagtt agtaaacctt tttgctgaag ccaatattag
    21061 taaaattaaa atcaaagaac aagatggttt tgaaatagaa cttgaaagag atatgtgctg
    21121 tgatgttcca gctcctgttt gtcctccagt ttcagctcca caacctatca atgtaagcgt
    21181 agtaaatgaa gctcaaccta gtcaaagtgt aaaatcaaat aaaccaagta taaatagccc
    21241 tatggtggga actttctatc aagctccaag cccaggtgca gcaccttttg taaaagtagg
    21301 tagtacagtt aaaaaaggtg atactatagc tattattgaa gcgatgaaaa tcatgaatga
    21361 aattgaagcg gaatttgatt gcaggatcgc tgaaatttta gttgctgatg gtcagcctgt
    21421 agaatttgga atgcctttat ttgcggtgga gaaattataa aatggaaatt aaaagcatat
    21481 taattgctaa tcgtggagaa atagcgctac gtgctttaag aacaattaaa gaaatgggta
    21541 aaaaagcaat ttgtgtgtat tctgaagcag ataaagatgc tttatattta aaatacgctg
    21601 atgcgagtat ttgtataggt aaagcaagaa gttctgaaag ttatttaaat atcccagcta
    21661 ttatcacagc agctgaaata gcagaagcgg atgcgatttt tccaggatat ggatttttaa
    21721 gcgaaaatca aaattttgtt gaaatttgta ccaaacataa tatcaaattt ataggacctt
    21781 ctgtagaagc catgaattta atgagcgata agtcaaaagc taaacaagtg atgcaaagag
    21841 caggtgtgcc tgtaatccca ggtagtgatg gagctttagc aggagctgaa gcggctaaaa
    21901 aattagctaa agaaataggt tatcctgtga ttttaaaagc ggctgcaggt ggtggtggcc
    21961 gtggtatgcg tgtagtggag caagaaaaag aacttgaaaa agcgtactgg tcagctgaaa
    22021 gcgaagctat gacggcattt ggtgatggga ctatgtatat ggaaaaatat attcaaaatc
    22081 cacgccatat agaagtgcaa gttataggag atagttttgg taatgtcatt catatgggcg
    22141 aaagagattg ttctatgcaa agacgccatc aaaagcttat tgaagaatct cctgcaattt
    22201 tacttgatga aaaaacacgt actagacttc atgaaactgc tattaaagca gctaaagcta
    22261 taggttatga aggtgcggga acttttgagt ttttagtgga taaaaatttg gatttttatt
    22321 ttatagaaat gaatacacgc ttgcaagttg aacactgcgt gagtgaaatg gtaagtggga
    22381 ttgatattat agagcaaatg atcaaagtag ctgaaggcta tgctttgccg actcaagaaa
    22441 gtattaaatt gaatggccat tctatagagt gtagaatcac ggccgaagat tctaaaactt
    22501 tcttgccaag tccaggcaag atcactaaat acattccacc agcaggacgc aatgtaagaa
    22561 tggaaagcca ttgttatcaa gactatagtg tgccacctta ttatgattct atgataggca
    22621 agctcgtagt ttgggcagaa gatcgtaaca aggcgattgc aaaaatgaaa gtggctttag
    22681 atgagttact tataagcggg ataaaaacga ctaaagattt tcatcttgct atgatggaaa
    22741 atcctgattt tattaataat aactatgata caaactatct tgcaagacat taaaaattcc
    22801 cttttgtaag ggaattttat tttttatctt aaatattcta tattgatttt agagcgcagt
    22861 ttatcaaaat aatcttgtat gaaattttgt ctttgttcac tcacataagc atttaaaact
    22921 tcatttttaa cttgtttgta ttcgggggtt tgtgctccat ctttgttttt aacttcgtaa
    22981 agctcatagc cattttttcc atttaaaaca ggagaaaaac ctccgttagg aatttgtgat
    23041 aaaagtccta aaagtcttgg atctgcatta cttgtattta aagatgcatt ttgtgactta
    23101 agggttattt tttttgtatt tttgatattt tctaaagttt gaggattatt tgataagtag
    23161 atatttacat taatttgtgt ataaaaagtg aatttatctt tattttgttc gaaaaatttt
    23221 tttgccccat catcactaaa atcagttttt gccatacttg caattttttc ataaagcttt
    23281 cttttttcta aatctttttt aaaatttgtg cgaaattgtt catagctttg atttttggac
    23341 ttcaaatttg ctttaaaagc atttaaagtg gttttgtttt gagcaagcat tttatttata
    23401 gcatcatcaa gttctagatc attgactaca atacctagtt gtttcatttg tgaaatttcc
    23461 attttttcgt taatgagtat acctaaagct ttatttctat caattttaag taccttcata
    23521 gtttgatcta tatcataagt tgtgataggc tccttatcta caactacagc tatcgcatta
    23581 atagtatttg cactagctaa acttgcaaaa aatgcaaaac ttaacaaaat ttttttcatt
    23641 tcaaaccttt atttaagtat aaatatcgca ttatatcaat aaaaatttaa aaaaggcaaa
    23701 aaatgcacga aaaacttaca acgcgttttg ctccaagccc aacaggatat ttgcatatag
    23761 gtggacttag aacagctctt tataattatt tatatgctag aaaaaatggt ggaaattttt
    23821 tacttcgtat tgaaaataca gatttaaaaa gaaattccaa agaagctact aaggctatta
    23881 tcgaagcttt taaatggtgt ggcttagaac atgatggaga agtgacttac caatcagaac
    23941 gttttgatct ttataaggaa tatgttaaaa agcttttaga tgaaggcaag gcatattatt
    24001 gttatatgag taaagaagaa cttgatgaat tgcgtgccaa acaagaagct gccaaagagc
    24061 gtccaagata cgatggaaga tatagagaat ttaaaggcat gccacctcaa ggtatagaac
    24121 ctgttgtgcg tattaaagca cctcaaagtg gtgagattgt ttttgaagat ggcgttaaag
    24181 gtgaggtaag atttaaagca gaagatataa tggatgattt tatcatagca agaagtgatg
    24241 gaaccccaac ttataacttt actgtagtga ttgatgatgc tttaatgggg gtaagtgatg
    24301 taatccgtgg agatgatcat ctttcaaaca ctcctaagca aatcgtgctt tatcaagcat
    24361 taggttttaa aattcctaaa ttttttcatg tagccatgat acatggagaa gatggtaaaa
    24421 agctttcaaa aagacatgga gcaactgatg ttatggaata caaagaaatg ggaattttgc
    24481 ctcaagcttt gcttaatttt cttgtgcgtt taggttggag tcatggtgat gatgaggttt
    24541 tttccctaga agatcttaaa aagatttttg atccttatca tatcaacaaa agtgcatctt
    24601 gttataatgc taaaaagctt gaatggctta atgcttatta tattaaaacc ttgccttttg
    24661 aagagattaa tcgtcagctt aaagatcttg gttttgattt atctgtttac gaaaaagcgg
    24721 gatttttgct tgatttatta aaagagcgtg caaaaacctt acatgatatt ataaagggtg
    24781 caaaaagtat agttaatgca ccgcaaaatt atgatgaaaa cgcggtgcaa aaatttgtta
    24841 atgaaaataa tttagaatta ctaaaagcat ttgctaatac tcttaaagat caaaaaacaa
    24901 ataaagattt tgaaggtttt acaaatgatt ttttagaaaa aaaagaagca aaattaaaag
    24961 atctagctca gcctatacgc attgctttga caggaagtgc ggtaagtcct agtattttcg
    25021 aagtattaga atttttaggc gttaatgagt gtaaaaaaag aatagaaaat tttttaaaag
    25081 ttagaggaaa ataaaatgaa tttaaaagaa gaagctttaa aataccactt gggtggaaaa
    25141 attgatatta tgccaagtaa gccaatagtt acaagctatg atttatcttt ggcgtatagt
    25201 cctggagttg cagaaccttg ccttgaaatc gttagagatg atgagcttgc ttacacttat
    25261 acaaataagg ctaatttagt agctatagta agcgatggtt cggcggtttt agggcttgga
    25321 aatataggag cacaagcatc aaaacctgtt atggaaggta aggcttgttt gttcaaaaaa
    25381 tttgccaatg taaatgctta tgatatagag attgatgttc atagcgtaga agaaattgtc
    25441 aatttttgca aagctttagc tccaacagta ggtgggataa atttagaaga tattgctgcg
    25501 ccaaaatgtt ttgaaatcga agcagctttg caagatctag gaattcctgt aatgcacgat
    25561 gaccagcacg gcacagccat tatttcaact gcaggactta taaatgctat ggaaataagt
    25621 ggtaaaaaat ttaaggatat taaaatagtt gtaagtggtg caggtgctgc gggtatagca
    25681 agtgctaaaa tgtatagaaa tttaggtgtt gaaaatatta tcttagtaga tagtaaagga
    25741 gtgatttcta aagatagaaa tgatttaact ccacaaaaac ttgaatttgc tgttgattct
    25801 aaggagaaga ctttaaaaga agttttaaaa ggggctgatg ttttcttagg gcttagtagg
    25861 ccaaaaattc ttgatgatga aatgatttta agtatggcaa aagatcccgt gatttttgct
    25921 ttggctaatc ctattcctga agtgatgcct gaagatgtgg ctaggcttag aaaagatgct
    25981 attgtaggaa ctggaagaag tgattattca aatcaaatca ataatgtttt aggttttcct
    26041 tttattttcc gtggagcttt agatgtgcgt gcaagtaaaa ttactgaaaa tatgaaagta
    26101 gctgctgcaa aggcattagc agatcttgca aaactccctg taagcgatgc ggtgaaaaaa
    26161 gcttataatc taagtacttt agaatttgga agagcttatg ttatgccaaa accttttgat
    26221 gaaagagtga aagctgcagt aagtacagcc gtagcagcag ctgctgtaaa agatggtgtg
    26281 gctaaggtga aaaattttga tgagaaagct tattttgaaa gcttaaaatg aaaaatgtcc
    26341 attgtatcaa tcatccattg atcgaacata aattaggaat tttaagggct aaagaaacta
    26401 aaccctttca atttcgtatg ttaatcgatg aaatttcatc ttttttgctt tttgaggcta
    26461 gtaaagattt tttcttaaaa gaaattgaaa tttccacgcc tatacaaaaa actacaataa
    26521 aaaaacttga tgaaaaaatt atgatttgtc ctattttaag agcagcatta ggaatgcttg
    26581 aaagtatttt taagatgatt cctgatgcaa gtgttgggtt tttggggttt gtaagaaatg
    26641 aagaaacttt aaaggcagat ttttattttc aaaaactccc taaagatgca aaagaacgca
    26701 ctgctattgt tatagatcct atgtttgcta caggtggaac tgctatagaa gcttgtgatt
    26761 ttttaaaaag ccaagggatt agaaaaataa aatttatatc catacttgct gccccacaag
    26821 gtttgcaaaa atttagtcag gtgcatgatg atgtggaagt ttttgtagct tgcattgatg
    26881 aaggcttaaa tgaaaagggt tatattattc cagggcttgg agatgcagga gatagagtgt
    26941 ttaatactct ttaaaagaga tgatttttgg aaaaattgat tatattaatc ttttgccttt
    27001 gcatatatac cttaaaaagt atccattacc caatggttat aaagcaagta tggagtataa
    27061 aaaaggtgtt ccaagcaagt taaataagga tttattttat agaagaattg atgcagcgat
    27121 tatttcaagc atagaaagtg tgagaaaaaa atataaaaat ttggatttgg gtatttgtgc
    27181 taacaaaaga gttttaagtg ttttagtgga aaaaaataca ttaaatgcca aggatccaaa
    27241 ttcggcaact tcaaatgttt tagctaaagt tttaaaacaa gatgggaaag tgattatagg
    27301 cgataaggct ttaaaacttt atttaaaaga tccttctaaa tatattgatt tatgtaccaa
    27361 atggcatgaa aaaacaggat tgccttttgt ttttgctaga ttttcttgcg tgcaaaaaaa
    27421 agctttatat aaacgaattt taaaaaaatt tccacaaaca aagattaaaa ttccttatta
    27481 tatacttcaa aattatgcta aaacaagaga gttggacata aaagatgtta gatgttattt
    27541 agaaatcgta tatcataaaa tttctactaa agaaaaagta gccttaaagc gttttgtaaa
    27601 ggcttgcaag gctttaaatt ttgcttagtc aatattcaaa ttctctaagt tctttaactg
    27661 ttccaagtag tattacaaca tctccgctat aaacagttgt agtttctaaa tcagggagta
    27721 tttcccagtc gctatttaat tttttataag aaattacctt catattttgt gctacatgtt
    27781 ttaaagaatt tcctgctaat ttttcatcta tgttgatctt gatagctcgt atagtatttg
    27841 ctgaaagatc aaaaacctca taatcagcat ctttggttaa aaattctttt accagtcttt
    27901 tagcactttc tttttcaggg taaataatct ttgttgcacc taacttagaa agaatttgac
    27961 catggatatt agaggttgct ttagcaatga tatttttaac acctatatct ttaagtgcca
    28021 taagagtaag tattgatttt tcaacatttt ctcctatact aacaataact acttcaacat
    28081 catgaaagcc tgcttctttt aatgctaaaa tatttgtaga atctaaaata taagcataac
    28141 ttggaggatt ttgtatactt tttaaagctt cttcatcttt atctacaacg ataacagtat
    28201 gacctccagc aatgagttca tctgctacaa ctgagccaaa ttttccaagt cctatgattc
    28261 cataattaag atttttcacg attttacctt tataaattaa cctttccttc agggaatttt
    28321 aaatggatag ctttgtcttg tttgaatact gagagtaaaa aggcaaaaac acctatccta
    28381 ccacttagca tcataatgat aataattatc ttgctaggat cactgaacaa agcacataaa
    28441 gacaaagttc caccatttcc aactgaaatt cctacagttg caaaagctga agaagtttca
    28501 aaaagtaagg ctataaaatc aaattttgat tctagcaaag aaagtaaaat aacagctatt
    28561 actatataaa cagctgaacc tacggctata ataaaagctt tagatatggt ttctgctgga
    28621 atttcatgtc caaaagttct aacccttcca tcgcggatac tccaatacgc atagagtaat
    28681 aagaccatta cagttgttac tttcatgccc ccagctgttc cgcctggcgc accaccaata
    28741 accataaata aagatccaaa aaacaagctt gcatcatgta aatgccccat atctaaggta
    28801 ttaaatcctg ctgtacggta gttaatagca ataaaatatg agcttaaaat cttatcaaaa
    28861 aatgaaaaat gtcctatggt ttgaggattt gagtattcaa aagcaaaaat aataagtgtt
    28921 gaagagaata taagaaaaat gcttgcaact acaaccattt ttgtgtggag acttaaattt
    28981 tgcaattttt ttctttgaaa aaagtataat tcaaccaaaa caaaatatcc aagccctccg
    29041 ataataatta aagaagtgat aataagatta attgctatat cgtgtttata agctataagt
    29101 ccatgttcaa atatagtgaa tccagaatta ttaaaagcac taatggaatg aaaaattcca
    29161 aaccatagag cttttttaaa gtccatttca agggcaaaac gcatagtaag aagtatggca
    29221 cctattaatt ctatagtaaa aataaaaagt aaaacttttt taaaaaattt aaacaaaccg
    29281 tccattgatg gataaaataa agactcttta agtaaatttc ttgcattaaa accaactttt
    29341 ttgcgtatga gtatgtaaac aaataaacct atacccatat atcccaaacc gccaatttgc
    29401 accaagacta agataataat ttgccctgct aaagtaaaat caacggcagt gtttttaatt
    29461 actaatcctg tcatgctaac agcagatgtg cttgtaaaaa aggcatctaa aaaatcaata
    29521 ggggttgtat gtgcccagct tgaatgcagt agtaaagccc caaacaatgc aataataata
    29581 tagccagtta gtaaaatttt aaaagttcgt ctgtcgagtc caaattgttt caaaaaattt
    29641 ccatttgata atgatctaaa gcgggtattc tatcttatta aaactttaag ggaaataaaa
    29701 ttttattttt atatttaaac ttaaattaaa aaaaaaaaga tacaattaca tttttatttt
    29761 ataacaaaaa ttgtggttgg atagctcagt cggtagagca gcagactgaa aatctgcgtg
    29821 tcggcagttc gattctgcct ctaaccacca tctttgcatt ttaaaaatca taaattataa
    29881 tacttctttt ctggtgttta aaggttaaat attttaaagc taaaaattat tattgtttta
    29941 aagagtatat ttataacttg tagtaaaatg gtggatttag caggactcga acctgcgacc
    30001 aaccggttat gagccggttg ctctaaccaa ctgagctata aatccgccta agttgaatta
    30061 aaagataaaa ttatatctta ttaatgctta aaaatatttt atttagcttt tatatctgtc
    30121 caaaaatatc taaaagtgat taaatgttgt aaaattccaa aaaaaatcat aaaaatcgta
    30181 aaagaacttc caccataact aaaaaatggt aaaggaattc caactactgg tgcaaagcct
    30241 atagtcattg agatattcac tgcagcataa ataaaaataa ataatgcaac gcaattaata
    30301 gcaactctag caaaataatc atctttaagt ttataattta aactaagcag atgaaaaata
    30361 agcaaaatat aaagtataat taatattaac cctccaataa atccaaatct ttctatcata
    30421 taagcgaaga taaaatcact ggttgaaatg ggtaaaaatt taaaatgagt ttgtgtagct
    30481 tcgtcttgag attttccagt taaactacca tttccaatgg ctatcattga ttgagctact
    30541 tgataacttg gtttttctga aataaaatca tgaattcttt gtttttgata cggttttaaa
    30601 agatgtgtgt aaataatagg agaactaaca cttatagcta taataatact tagccaaatt
    30661 ttataatgaa cacccatgat aaaaagcact ccaaagccaa caagtagcaa aaccatagca
    30721 cttcctaaat caggctcttt tgcaataagt aaaaaaggta agataatata aaagctaagc
    30781 ttaataaatt gtttaacttt gtatccattt tttggaggag ggttctgata aataagataa
    30841 gcaagcatta aaataaaact gggtttaaaa atttcagaag gttgtatggt aaagtgggta
    30901 aaaggaattt caagccatct tttagcacct aatttttcaa ccccaaaaat atctacactc
    30961 agtagtaaaa atatattaat ccagtaaaca aaaggaataa tccaaataaa tttccttaca
    31021 ggaaagaaga aaaaaaacat aaaagcaagt agtcccacac aagcataaac aaactgtttt
    31081 tctgctaaaa aaggattagc ttcaaaaatc aggaaaaatg aaataagaat tataggtaaa
    31141 aataaaatag gttgcatata gtcaaaatga gttaaaattc ttctatctaa tgtaaacaaa
    31201 atttgccttc agttggtaat ataaagttat aattataaac taaaatttta aatttatcaa
    31261 atacccctaa ggaaaaaatg caaacttttt tagtagatga aaattcaaga cttgatgtgt
    31321 ttttggctaa aaaattaaat caaagtcgca atcaagttgc tttgcttata gaaaaagatt
    31381 gtgtgcaggt taatgataaa attcaagata aaaattcgtt taagcttaaa aacggtgatg
    31441 ttgtttttat tgcaagttta aatctttgta atgaggtaaa acctcagttt gaagtagatt
    31501 ttgatattga tgtattatat gaagatgagg atttacttgt tttaaacaaa ccttctaatt
    31561 tagttgttca tggggcaagt agtgtaaaaa atgctacttt ggtggattgg ttgatagaaa
    31621 aaaaatatac tttatcaaat ttaggaggag agataagagc tggccttgtt catagattag
    31681 ataaagatac aagcggggct atattaatag cgaaaaataa ttttacccat caaaaactaa
    31741 gcgaacaact tgcagataaa agcatgggga gaatttatct tgcgttaatt gatttgccac
    31801 taaaagaaga taaaattata gtggaaaaat ttttaatgcg ttcaccttct aatgctatta
    31861 aaaaaatagc tatagatgag gaaaataaat ttagcaaaaa tgcaaagtcg gcttttataa
    31921 atgtaataaa aactgaaaat ttaactttga tggcagctaa gctttttacg ggaagaaccc
    31981 atcaaattag agcgcattta gcaagtttaa atcgtcatat tttaggcgat aacttgtatg
    32041 gttataaggg taagtatgat tgtaggataa tgttgcatgc ttattttttg tattttatcc
    32101 atccaagaac caaagaacaa atttttgtta aagcaccttt aatggaagat tttaaaaata
    32161 ttatgtttaa ccaaatcaat ttaggagaaa atgatgaaaa gatttcactt gagtttttac
    32221 ttgagttttt taactctttt gcttagtgct tgtagtgtct cacaaataaa ttcactaact
    32281 tcaagtaaag agcttaccat aaatgaaagt ttgccaaagg ttgaaagttt aaaaagtctt
    32341 agcgatatga gtaatattgc ttttgaatgg gaacctttat ataatgaaaa tatcaaagga
    32401 ttttatttgt atcgctctag tgatgaaaat cctgatttta agcttgtagg catcattaaa
    32461 gataaatttc aaacccatta tgtagatact aaattagagc ctaataccaa gtatcgttat
    32521 atgatgaaaa gttttaatga acaagggcaa atttcagaag atggtaagat tatagaagtt
    32581 aacacaactc caagacttca agccgttcct tttgttcaag ctgtgaccaa tctgcctaat
    32641 cgtattaaac ttatttggcg tccacatcct gattttagag ttgattctta tattattgaa
    32701 agaaccaaag gcgatgataa ggaatttaga aaaattgcag aagtaaataa tcgcttaaat
    32761 gctgaataca ttgatagtga tttaaaacct aatgaaaatt caagctatag aattattgct
    32821 gtgagtttta atgggataaa gagtgaacca agtcaagttg taagctctat aagtaaagct
    32881 ttgcctcctc aaattgaaca tttaaatgct agcacagatg gttctaataa aatcatttta
    32941 acttgggatt ctcctgcata tgaagatttt tcttattaca aagtttattc tacgagttca
    33001 agtttccttc cttttagtgt tttggcaaag actgataaaa actcttacga ggatatagta
    33061 gaaggagcag gtaaaagcaa gtattataaa gtaacaatgg tagataagga tggacttgaa
    33121 agtcctatac caaaagatgg tgtagaaggt aaaactttag atattccttt agcccctagt
    33181 attattttag ctcaaagtac aagcgaaggg ataaatttag aatggagtga taatgatact
    33241 agagcggttg aatatgaagt aagacgctat ggcggagagc aaaatgcggt ttttaaaggc
    33301 attaaagaaa agcgattaaa agatgtaaaa gtttcgccag gggtgaagta tagttatgaa
    33361 gttattgcca ttgattcagc cggacttcgt tcaaagcctt caagcaaagt taaggcggct
    33421 cagtagtgcc aaattttaaa agcaaaaaga tcaaagaaat aaacttgcct tatagcaaag
    33481 atgatgttga attcctttgg cttgctaaaa atgataatgt tagtcttatt tatacaaagg
    33541 ttcaagaaga gagttttttt ctgcagatta aaagagcaca aaatggtttt gtgattaaga
    33601 gtgataaaca tacaaaacct tctaagatag gttatttgca aaaggcttta aaaattttta
    33661 aagaaggttt ttgtgaggat attatcaacg aagcttttag gcttaaaaac aatgctttaa
    33721 ttgaaaagac gccatttatt gttgataact ttgatgaact tttgtccaaa cttcaaggta
    33781 aaatttatat agaaataggt tttgggtcag gaagacattt gctttatcag gcaaaagaaa
    33841 atccaaatgt tttaatttta ggagtagaaa tttacaaccc agccttaacg caagtagcta
    33901 aacttgctaa agcacaaagt gtagataata ttttattaat ccaaagtgat gcgagattgt
    33961 tattaagtgt attaaaatca aaatcgattg aaaagatttt tctgcatttt cctgttcctt
    34021 gggataaaaa gccacataga cgggttattg gaaaagattt ttgtaaagaa tgtgctaggg
    34081 ttttaaccca aaatggtcgt tttgaactta gaacggatag ttttgagtat tttgattttg
    34141 ctttgaaaca atttttaact tttcctgctc caaaatttaa tcttagaaaa aatgaaaatt
    34201 tagaaatttc aagtaaatat gaagatagat ggaaaaaaca agaaaaagat atatatgatc
    34261 tttgggtatg gaatcttgat gaagaatata aaaactatga gttaaatgaa tttaatttat
    34321 cattgattga attttctaaa gaggatttga gaaaaataga acagaatttt aaaaatatta
    34381 ctataaaaaa agatgatttt ttcttgcatt ttgaaagcat ttgcaaacaa gatgaaagtt
    34441 tgcttttaaa gcttgctttt ggggctttta ataagcctga gcactgttat ttacatgtgg
    34501 ataaaacgat tgattttgtc tttaaagagc catttaaaat tcaagaaaat attaaagcaa
    34561 tgaatgaatt aaaagaaatt ctaaaagttc agtttaaaat atagcttttc ttgaaaatta
    34621 agcaaaaata aagcataatt taaaaattaa aaaagggaaa ttaaggaaaa aggatgccta
    34681 agttaatcca agcaaataaa cttactttag gttatgatga attagttatt aaagaagcaa
    34741 gttttgcttt taaggatgat gattttgttt ttattacagg taaaagtggg agtggtaaga
    34801 gtacgctttt aaagtctttt tatggggatt tagaacctct ttctggtaaa cttgaagtat
    34861 gcggatcttt gatgaataaa atcggaaatt tagagctttt aaaattgcgt caaagaatag
    34921 ggattatttt tcaagattat aaacttgtgc aagaatatag cgttgaaaaa aatgttatgt
    34981 tacctttaat gattaaaggt tatagtaaaa aagtatgtca tgatcaagcc gctaagcttt
    35041 taaagcatgt aaatttaact tttaaagcag ataaattgcc taatcaactc agcggtggtg
    35101 agcagcaacg cgttgctatg gctagggctt tagctcataa tcctaagctt ttactttgtg
    35161 atgaaccaac aggaaatttg gacgagtatt cttctgatat tatatggact cttttaaagt
    35221 ctgctagaga gcttttagga acttgtgtga tagtggtaac gcatagaatt cctagtaatt
    35281 taagagtgga ttatcgtcgt tttaatatag aaaatggaaa aatgaatgaa attctttaaa
    35341 acacatttat ctttaatttt acctttgctt tttatgatgt ttgctttcga gtttattttg
    35401 attacaaatg caactttaaa gcactatgaa gagcttgtta ataaagatta taacattata
    35461 gttgttagca aaactgaact tgatcaaaat gtggtaaaag caaaaatacc attttttgct
    35521 ggacttaaat ctttagatcc taaagattta attgatcgtt tgaaaaatga tgtttctgaa
    35581 aagaatttga aggttttaaa agattctttg ccaaaatttt atgctttaaa attaaattct
    35641 ttacctgatc aaaatgagtt aaattcgata aaagatcaac ttttaaatat cgtaggtgtt
    35701 agtaaggttg aaactttttc taaaactcat gataagatat actctttgct tattttgatg
    35761 aaatttgttt tttggttgtt tttatttatt attattttac ttgcctttgt tttgttttta
    35821 aaacaaatga gaatttggct ttatgagcac actgatcgta ttgaaattat gtgtttattt
    35881 ggagctccgt tttggtttag atcctttatg ctttataagg tagttgtagt tgattgtttt
    35941 atcgctttta tcgctttact tgcctttttt acacaaattt ttgatctttc tattattcaa
    36001 gaaagtttaa aagctgtaga tattattttt ccgcctatta attttatttt acatttgact
    36061 ttaatttttt tagctacttt atttatttgt ttattgtgtg taaatatggt tatgtttaag
    36121 gttaaaagat gagaaaaaat gttcttatct ttttttgttt ttttttactt attgatataa
    36181 gtttggcaaa tgctataaat gaaaaaacaa aaagtttaga agaaaataaa cgcatacaag
    36241 aacagttaaa taaaaaactt gaagatttgg ctagtgatat tttaaatggt gaaaaaagtt
    36301 taaaagattt aagtttacaa attgaaagtt taaattcgca aacttctaag cttgaagcaa
    36361 gtgctaaagc tcaaaatcaa gaattaaact cccttacaag tcaaaatcaa gatttgctta
    36421 aaagtaaatc aaatatggaa ggcaagctta tatctttgat ggctaaagat tttgcctatg
    36481 atttacctat tcctcagggt tatattgaaa gtgaagaaag ttttatggcc tttgaaattt
    36541 taggaagctt aaataaggtt ttaaatgaag aaatttttaa aatttctaaa gattatgaag
    36601 gggtgagtag gcttattgat gataaacaag cccaaattaa aagaattaat gatagtctta
    36661 aggattataa tacccaatta gctaaacttc aaagtttaaa gcaaaaacaa atcaatgaga
    36721 tcaacaaaca aaaaacagat cgagctatat atgcaaaaaa acttgatgat ttgcaagctc
    36781 aacaagaaga acttagaaaa acactaaatc aacttaaaat tattaataat aaagagaata
    36841 caaactcaaa taaaaatgat gctaaaatag taaagaacaa tcaacaaatt agacagttag
    36901 gttcaggtta tcaagggggt tcagttaagc attatacagg aaaaaaaact atagctccat
    36961 tggattcttt tactgtgaag caaaaatttg gaaattatgt tgatcctgtt tataatctta
    37021 aaatttttaa tgagaatgtg gttttaagaa gtaataaaag tgatgcagtt gttaaaaatg
    37081 tactagatgg aaaaatagtt tttgctaaag atactagtat gctagctcgt gttgttattg
    37141 ttgagcatga taatggcata catactatat atgcgcattt agataagatt gctcctaata
    37201 ttaaagttgg caagaatatt aaaaaaggtg ctgtggtggg tagaataaaa aatgatctta
    37261 cttttgaagt aactcaaaaa aattttcata tcaatccttt ggaacttatt agcttaaatt
    37321 agctaaattt aatggaattt aaaatataat ttcaagttga taaggaggag aaataatgca
    37381 ggaaagaaaa agagttttag taaaattttc aggagaggct ttagctggtg aaaatggctt
    37441 tggtatagaa aattctatct taaaattcat agcttcagag attaaagaac ttataaaaaa
    37501 tcaaatagaa gtaggtatag tcataggtgg tggtaatatt atccgtggag taagtgctgc
    37561 taagggtggt ttgattaaaa gaacaagtgg ggatcatatg ggaatgcttg ctacagttat
    37621 taatgccatt gctatacaag aagctttaga aagctccggg cttgaagtta gggttcaaag
    37681 tgcaattcaa atggaagcat tttgtgaaac ttatatcatg agaagggcac aaagacactt
    37741 agaaaaaggt cgtgttgtga tttttgcagc aggtactgga aacccttatt ttactacaga
    37801 tacaacagca attttaagag ctgtagaaat tgatgcacat atggtgataa aagctacaaa
    37861 agttaatggg gtttatgata aagatccaaa acaatttgat gatgcggtat ttttaaatac
    37921 tttaaattat gatgaggcca tgcaagataa cattaaagta atggatgata cagctatagc
    37981 tttagccaaa gataataaac ttcctattgt ggtttgcaat atgtttgaag agggtaattt
    38041 gcttaaaatt atacaaggtg atatcagcct ttgttcaatc gttaaaaata attgaggaga
    38101 aaattatgga taaaagaata gaagaagtag cagcaaaagc tttagaaaaa atgggcaatg
    38161 atagatatcg tctttcttta gtggtggcaa aaagagcaga acaattggca aatggagcaa
    38221 ttcctttggt ggattttgat aaaaataaaa ataaactcgc agatatagct ttatatgaaa
    38281 ttgcggaaaa taaaattact ttagagggtt tagttgaaac caatcgatga agaattattg
    38341 cttgaacaat taatcgataa tgtaaaaaaa tgcaaagatt tggaagctgc taaagctttg
    38401 cttttcgaaa tttgtggtca tgatgccatt cttgaaaaag cagtagatta ctgtatattt
    38461 tgccatgagg ggcagtttag aaaaagtgga gaaccttacg cagtgcatcc tattttagcg
    38521 gcaacgcttg ttggattttt aagcggaaat aaaagcaata ttttggccgc tttactacat
    38581 gatgtgattg aagatacaaa ttgcactgaa gaggagctta aagaacagtt tggttctgag
    38641 gttttaaagc ttgttttagg gcttactaaa attatagaaa ttagagaaga taatctcatt
    38701 tcatcaaaat ctaaaaaaaa tttaaccaaa tcagctttaa cttttagaaa tatgctttta
    38761 gcgagcattg aagatgttgg agttttgatt gttaagttat gtgatagatt gcataatatg
    38821 tttactcttg atattctaag agaagacaaa caaaaaagaa tcagtgaaga aactttagtc
    38881 gtatatgctc caatagctca taggcttggt atttcaagta taaaaaacta tttagaagat
    38941 cttagtttta aatatcttat gccagatgag tataagctta ttgacaatta tattaattcc
    39001 aataaccaag aaatgcaatt aggtctaaat gagtttattt caaaaatcga acttttattt
    39061 ttaagcaatg gttttagaca aggtagtttt gaaattcaaa aacgcattaa acatagctat
    39121 tctatttatc ttaaaatgca aagaaaaggt attagtattg aagaagtgct tgatttgctt
    39181 ggagtaagaa ttttagttga aaaagtgagt gattgttatt tggctttagg aattttgcat
    39241 acacatttta accctttggt ttcgcgtttt aaggattata tagccttgcc taagcaaaat
    39301 ggttatcaaa ccatacatac tacacttttt gatgctaaaa gtatcataga agcacagatt
    39361 cgaacttttg atatgcataa aattgctgaa tttggtatag ctgcacattg gaaatacaaa
    39421 gaagatggta gtgttgtcgt acctcgtctt gattggctta cagatatttc aatgcaaagc
    39481 ataaacaatc ttgaaaatgc agaagattat aacgctattg aactttatga atatgctaaa
    39541 gatagtcttt atgttgaaga tgtcgcagtt tattctccta agggagaaat tttcacttta
    39601 cctcgcggag caacagttct tgactttgct tatgaagtgc atactaaagt aggacttcat
    39661 gcaaaaagtg cttatgtaaa tcgtatgaaa gtacctttgc tgactgaact taaaaatggt
    39721 gatattgtgc gagtggttac tagtgatgat aaattttatc gttgttcttg gatagatagt
    39781 gttaaaacag gaaaagcaaa agcaagtata agggaatttt gcaagcaaaa aataagagaa
    39841 attaatttag caagttctat taatatgtta agttttattt ttggagttga taaaaataga
    39901 attgaaaatt ggatagaaaa agaaaattta gccaggcgta ttagacaagt ggcaacagac
    39961 agtgcttatt taaaagatat agttaatagt cttaaaaaat atgccaagaa gtcatattgg
    40021 tttgacaaat atgagattaa agaacaaaaa ataggaaatt ttaccctgta ttgtaatcat
    40081 aaaattgcta atgtagattt tgatttttgt tgccatccaa aaagaggtga tgctgtttta
    40141 gcttttgtta aaggtggtaa tgctgtcgtt catcataagc tttgcgatag agctgataaa
    40201 atgatagata ataatcaaga catggtattt ataaaatggg attctaatat ccttaaatct
    40261 tataaattga ttttttcttt ggaaaataaa aaaggtgttt tagcggaatt tttggcattt
    40321 ttagctaaaa tgcagataaa tttattaaca attaatttat caagtgattt aaattcggca
    40381 gtagattatt ttgagattac aatggaaatt cctgataata tcaatccaga tagtgttaag
    40441 gatagattaa aatctcgttg taagatttta gattttacat ctttaaatga tgcttataaa
    40501 gaaggttaaa aaggtttatt gtggatataa aaaaaatact agcagaagtt aagcgtggct
    40561 gtgcagaact tattgacgaa gaaagaatag aaaatttaat caaaaattat tatgaaaaag
    40621 gaaaaatttt ttttataaaa gcgggatttg atcccacagc gcctgattta catttaggac
    40681 acagcgtgat tttgaccaaa atggcttttt tacaaaaaca tggagctatt gtacagtttt
    40741 taattggaga ttttacaggg caaatcggtg atccaagtgg aaaaagtgca acgcgtaaaa
    40801 agctgaataa ggaacaagtt ttaatcaatg ccaaaactta cgaaacacaa gtttttaaag
    40861 ttttagataa agaaaaaaca cagattaagt ttaattccac ttggcttaat gagcttggag
    40921 ctacgggtat agtggagctt acttcaacct ttagtgtagc tagaatgctt gagcgtgatg
    40981 attttacaaa aagatttaaa gatcaaagtc ctatttcgat ttgtgagttt ttatatcctt
    41041 tgcttcaagg gtatgatagt gtggctttaa aaagcgatat tgaaatgggt ggaacggatc
    41101 aaaaatttaa tcttttaatg ggaagacaac ttcaaagagt ttataacata ggaaaagaac
    41161 aagctgtgat tatgatgcct ttacttgaag gtttagatgg tgtaaataaa atgagtaaaa
    41221 gtttaaataa ctacatcggt gttacagaaa aagctaatga tatgtatgct aaaattttaa
    41281 gtattagtga tgaattaatg tttagatatt atgaactttt aagtcaaaaa agtttagaag
    41341 aaatcgcaca aataaaaaga gatatagaac aaggcagttt gcatcctaaa aaagctaaag
    41401 agaatttagc cttagagatt accgaacgtt ttcattctaa agaagaagct gataatgcta
    41461 aatctgaatt tgatagaatt cattctcaaa atgccttacc aagtgatatg gctgagtttg
    41521 aaatacaagg aaaaatttgg cttgccaagg ctttagttga atgtggtttg gaaagttcta
    41581 cgtctgcagc aagaagaagc atcagtgcta acgcaataag tgtaaattct caaaaagtta
    41641 gtgatgggca aatgcattta gagcaaggag aatacatctt acaaatcggt aaaagaaaat
    41701 ttgcaaaatt aaaggtaaaa gaatgaattt acaaccctta caaataggaa aacatagtat
    41761 aaaatatccc atttttcaag gaggaatggg attaggtata agctgggata aactagcttc
    41821 tgcggtttct ttaaatggtg gacttggaat tatttcttct gtgggaacgg gatattatga
    41881 agaaagaaag tatgtaagca aagaattgaa tgccaagcct tatggaagtg aaaattttta
    41941 ttcacgcaag ggtttacaag ttttgattaa taatgcaaga aaggtttgtg gcgatgcacc
    42001 tttggggtgt aatatcttat gtgcaagtaa tgattatgca agaatagcgc gtgatgcttg
    42061 tgaagtaggt tttaatatca ttgtttcagg tgcaggactt cctacaaatt tacctgaatt
    42121 tacggcggat tttcctgatg tggctttagt gcctataatt tcatcgccta aggctttgaa
    42181 aattatttgt aaaagatggc aaagccgtta taatcgtttg cctgatgcag tggttttaga
    42241 agggccaaaa agtggaggtc atcaaggttt tacttatgaa cagtgcttag atccaaatta
    42301 tcagttagaa aaattgatca ctccagtggt ggaagaggct aaaaattggg gttcttttcc
    42361 tgtgattgct gcgggtggaa tttgggataa aaaagatata gaaaatgcta tttctttagg
    42421 tgctaatgga gtacaaatgg gtacgcgttt cataggtact tttgaatgcg atgcgagtga
    42481 agaatttaaa agcgttttgc ttgcttctaa agaagaggat atagagctta tcaaatcccc
    42541 tgtaggttat cctgctcgtg ggattagaac taatctttta aatttagtag ataaaagaat
    42601 gggtccaaag attaattgca taagtaattg tgtagcacct tgtggacgcg gaaaagaagc
    42661 aactaaagta ggatattgta tagcagatag gctttttgat gcgtggtcag gaaaaagaga
    42721 aacaggactt ttctttacgg gtgctaatgg atatcgtttg gataaactta tcagcgttaa
    42781 agaacttatg gaaaaactgg ttaatggtga ataatggcta attttttttt atttttagta
    42841 ttttttttca cttgtctttt tggagcttat gaaaatgagc ttacaaattt tgataagaat
    42901 tttattggtt ctaaaagtga agtacaaata aaatttcatc atcagcttaa aagtctttat
    42961 atacaaagtg ttattaatga agatgagaaa accaaaattg aaattttaaa aagattaatt
    43021 atcagttcaa atactttaaa tttagatgat aagtcatatg ctaatgagtt aaaagaaagt
    43081 ggtataagtg aagcaagtat caatgcttta agaaaagctg ttattaaaga tattaaagtt
    43141 caaagtattg ctcaaaatac tgaaaaatca acttttgaac ctataaaaac cactcaaaaa
    43201 aatgaaaaaa attctctcaa tgaacaagta aaaaatacag aaaaaataaa caccaaaact
    43261 ccacaagcac aaaagagtag cattgctcct aaagcaaaaa gtgatgataa aatttatgtt
    43321 ttaaaatcaa acaaaacaaa ccaaggtgtg gagtttgaac tgaacgcaaa tctgaataag
    43381 gatcaattaa aaagctttgc cctagatgaa aaaggaaatt atcgttttat tagtgatttt
    43441 gaaggggttt tagaaggagg taaaaaagag tttaaatttg atgattatcg tttagtgatt
    43501 tcacaattta atcccaaaac tatacgtata gtagtatatg ctaaagaaaa aatttctatt
    43561 gatatatctt ttaaagagga gagattaatt ttttcaaaag aaactactac gcaaaaaaag
    43621 atacaacaaa atagtaaaac ttcagagaaa aagcaagagc aaaaaacaga agttaaaact
    43681 aaggttttag aaacaaaaaa acaagataaa aaaactaata ataaaaaaga aaatcaagaa
    43741 cctttatatg ttttagatgt agataaaatt cctaatgctg ttgtgttaaa tttaagtgat
    43801 aatttagatg aaaaagaaat agcagtattt gatactaagg atcaaaaatt ccgatatgtt
    43861 gtgagtttta agggtgtgct agaaggcaat agaaaaagct ttacttttgg acaaaatgcg
    43921 attacagtca cccagtataa tccaaaaacc gttcgtgtgg ttttaagtgc tcctaaagaa
    43981 tttaaacttt taaaaaaact agataataaa aatctcactt taggttttta tacacaaact
    44041 acaaatcaaa atgcaaataa aaaaacaact caaagctcta gtaaaacttt aaatacaaat
    44101 tacaaatcag gaaagcttgt agttattgat gcagggcatg gcggaaaaga tagtggcgct
    44161 ttaggtgata aaggaaattt aaaagaaaag gatatagttt taagtacggc tttaaaactt
    44221 ggaaatgaac ttaaaaaacg cggttataaa gtgctttaca ctagaagttc ggataaattt
    44281 atcaatcttc gtgatagaac taaatatgcc aatgataaaa gagcggattt gtttatttct
    44341 atacatgcta atgcagcgcc aaatgctaca aaagctaaaa gtagtgaagg tgtggaaact
    44401 tttttcttaa gtcctgcaag aagtgaaaga agtaaaaaag ctgcagaaaa agaaaaccaa
    44461 ggggattttg aagagattaa ttatttctca aaacaaagca ttttaaattt cttaaaccgc
    44521 gaaaaaatcg ttgcttcaaa caaacttgcc atcgatgtgc aaaaaaatat actcactcaa
    44581 acacgcaaaa aatataaaat catagatggt ggcgtaagag aagcaccttt ttgggtttta
    44641 gtgggtgcgc aaatgcctgc aattttgatt gaaattggtt atattacaca tccaaatgaa
    44701 ggtaaaagaa ttgctaataa agcttttcaa gatttattgg ttaaaggtgt tgctgatgga
    44761 gttgagagtt atttttataa cagccaatga aaaaagctaa tttaatcttt aaggataata
    44821 ctcctttttc tttggatttt gatgattttt attttaattc caaagatggt ttaaatgaaa
    44881 gcaaatttgt ttacactcat gcttttgaat ggaaaagtca agaaaatttc attattgcag
    44941 agagtggctt tggcataggt ttgaattttt tccttacttt aaaacgcttt ttagaaacta
    45001 ctctttctaa gcgtcctaaa aaactttttt atattagtat agaagctttt tatatcgaaa
    45061 aagaacaatt aagagaaatt tatcaaaagt taggatttta cgaagagttt aaagaatttt
    45121 tagagcaatt tttaaaattt taccctaagg ctaaagaagg gatttatcgt ttttatttca
    45181 aggattgttt tttagatctt gtttttgaag atattgctat tttaaaagaa ttggatttta
    45241 aagctgatgt ttggtattta gatggatttt ctccaaataa aaacttgcaa atgtttgatg
    45301 agaaaattat ttttgaagtg gcaagacttt ctaaaaaaga tatgcaaatt tgcacttttt
    45361 cttcagcgag ttttttgcaa aaaaatctaa aaaaatacgg ttttaaagtg gaaaaaacta
    45421 aaggttttag aaaaagagaa atgcttagag cttatttgga aaatgagcta gaatttaagg
    45481 ataaagaggc atatttttca agaacatttt catctttaaa aaataaaaaa gtagccatta
    45541 ttggtgcagg tatatcaagt gctactttag cttatgagct tagtttaaga ggttttgagg
    45601 ttgatgtttt tgaaaaacat ttagagttag gtaagggtgc aagtggaaat gaaagtggga
    45661 ttttaagctc tttaatctta aaacctaagg taaatttagg ggaattttca gagttttctt
    45721 ttatagaggc gagccgtttt tatagacaaa ttttggattt aaattttaaa ggtgtgattg
    45781 agtttgcgca taatgatttg atgcaagaaa gatttgatac gcaaagggaa aatgttttgt
    45841 ttaaaatttc aaaaaaccaa gcttttttag aagatggtgg agtgattttt ccaaaaaatt
    45901 tagttaaaaa tctttttgaa aaaagtaaag cttgtatata ttttaatcat gaatttcaaa
    45961 cttatgaatt taaaaatgag tgctttgctt taaaatttaa aaatgatatt gttaaaagtg
    46021 attatgcagt tttaatctat gctatgggtg cggatacaaa agattttatt ttttatgatg
    46081 aaatgaaact aagtaaggta aggggtcaag ttacacatct aaaacctttt ttagatattc
    46141 agtttccttt atcttctaag gcttatattt gccctataaa agatgatttg caagtgattg
    46201 gagcaagtta tgataggctt gatgtaagtt tagagtcaaa agaagaagat aatagacaaa
    46261 atatagaaaa tataactgaa tttatagata aaaatacaaa attagaaatt ataggttcta
    46321 aggtgggatt tagatcttat tcaagtgatc gttttatgat agttggtaat gcctatgatg
    46381 aagcatttta taaagaagag tataaagctt tattatggac aaaaaacaaa gagcaaaaac
    46441 cagctaaaat atcttgtaat ttatatttta atttcgctca tggatcaaga ggttttagca
    46501 caagtgtttt agcggcaagg tatttgtgtg cattgataaa taatgaaccc ttatgtttag
    46561 aaaaaaaata catccacgct attcatcctg cgagattttt agttcgtaag ctaaaaaaag
    46621 gcttaaatta aattttaatt aagaataata ttaatattta cttacgagaa taaattttta
    46681 attttatttt aatttccttt gttttattat tatagggagt aaaattaata ttaaaggaaa
    46741 tataatgatt gattatcata aaatagagtc gcgtttatcg actcttgaaa agcttccttc
    46801 tttaaaagat aatgatagta ttgcaaacgc attagaaaaa tcaggttttt ctagaaggga
    46861 ttttatgaaa tgggcaggtg ctatgacagc gtttttagct ttaccagcga gttttactcc
    46921 tatggtggca aaagctgctg agcttgctga taggcttcct gttgtttggc ttcatatggc
    46981 tgagtgtaca ggctgtagtg agagtttgtt aagaagtgat actccaacga ttgatagttt
    47041 gatttttgat tatatttctc tagaatatca cgaaacagta atggctgcag caggttggca
    47101 ggctgaagaa aatttggaaa gtgctattca aaaacataaa aataaatata ttttaatggt
    47161 tgaaggtggt atccctatgg gtgatacaga gcatttttta accataggtg cacatggaca
    47221 aacaggttat gagctttcaa agatggcaag tgaaaatgct ttggctattt ttgctatagg
    47281 aacttgttct agctttggag gaattcaagc cgcaagacca aatccaagta atgcacaacc
    47341 tttaagcaag gtaacaagca aaactgtcat caatgttcca ggttgtcccc caagtgaaaa
    47401 aaatatagtt ggtaatgtac ttcattattt attgttcggt gaattgccag cacttgatgt
    47461 gtataataga ccaaaatggg cttatggctt aagaattcat gatctttgcg aaagacgtgg
    47521 gcattttgat gcaggtgaat ttgtacatgc ttttggagat gagggagcaa aacaaggttt
    47581 ttgtctttat aaagtaggtt gtaaaggacc ttatactttt aataactgct caagagagag
    47641 atttaatcaa cacacttctt ggcctattca agcaggacat ggttgtatag gttgttctga
    47701 acctaatttt tgggatacta tgggaccttt tgaagagcct atggcaagtc ataaatttga
    47761 tactgttttt ggactgggtg cagatagcgt ttcagataaa atcggcatag gagtgcttac
    47821 actcacaggc gttgctatag cagcacatgc agttatatct tccatgcaaa aagataagga
    47881 ataaaaatga gtcaaaaaat aatcgtagat cctattacaa gaattgaagg gcatttaaga
    47941 gttgaagttg ttgttgatga taacaatgta gtaaaagaag cttatgcggg ttctactttg
    48001 tggcgtggta ttgaaaccat agtaaaaggg cgtgatccaa gagatgcggg ttttatgacc
    48061 caaagaattt gtggagtttg tactttttca cattataaag caggtatagt tgctgttgaa
    48121 aatgccttag gtattactcc gcctttaaat gcacttttga caagaacttt aatgaatgcg
    48181 gctttatttt tacacgatca tatagtgcat ttttatcaac ttcatgggct tgattgggct
    48241 gatgtggtaa gtgctttaag cgcagatgtt aaaaaagcaa gtgatgaagc ttttaaatac
    48301 actccaaatc cttatgcaac gggtgcggat aaacttcttg aagtgcaaca aagacttaaa
    48361 actttcgtag ataaaggaaa tttagggcct tttgccaatg cgtactatgg ccacccaact
    48421 tatcgtttaa accctgaaca aaatttaatt gttctttcgc attatctaga atgtttaaga
    48481 attcaaagaa tcatcgctca atgtatggcg atttttgggg caaaaaatcc acatccacaa
    48541 agtttaactg ttggtggtgt aacttgcatt atggatttac ttgatcctgc aagaatgggt
    48601 gagtatatgg ttaaatttca agaagtgcaa gactttgtta atcgtgcgta ttatcctgat
    48661 cttattatgg caggaaaagc ttatgcaaat gaagcaagcg ttttaaatga tataggagta
    48721 aataatcttt atacctttaa agaattccaa attggaagag atgaatggct ttttgaaagt
    48781 ggtattatta aaaatggaga tttaagtaag gtttatgaag tagaagaaga taagattact
    48841 gaagaagcaa ctcattcttg gtatgcagac aatgagcctt tacatcctta tgatggtaaa
    48901 acaaatccaa attacacagg gcttgtagat ggagaaagtg tagatcatca tggaaataat
    48961 gtccattcta aagtgtttga tactaagggt aaatatagct ggattaaagc tccacgctat
    49021 gagggaaatc ctatgcaagt gggtccattg gcaaatatcg ttgtaaatta tgctaagggt
    49081 aacaaaaatg ttgttcctgt agtagatgag ttcttaaaag aaacaggact tcctttaaat
    49141 gctgtattta gtacacttgg aagaacagct ggacgttgta ttgaggcaaa aatcgttgca
    49201 aacaatgctt taaaagcgtt taataattta gttgaaaatt taaaagtaga tcagagtact
    49261 tgcgcgcctt atgtgattga taattctaaa gaatacaaag gacgctatat gggacatgtg
    49321 ccacgcggaa cattaagtca ttggtgtaga atcaaaaatg gagtgattga aaactggcaa
    49381 gctgtagtgc cttctacttg gaatgcaagt ccaaaagatg caaatggtat aggtggaagt
    49441 tatgagcaat gtttgatagg tttaaaaatc gctgatgtaa aacaaccact tgaaatcatt
    49501 agaaaaattc actcttatga tccttgtatt gcttgtgcag tgcatgtaat ggatactaag
    49561 ggcaataatc taagtgaata taaagtaaat gtcaatttat aaggaggctt tcatgcaaaa
    49621 caaaaaagaa aaattgcaaa gaaaagctga atatgaattt agcataggtt tgcgtttaac
    49681 tcactggata agagctattg ctatagtgat acttattggc acaggatatt atctttctta
    49741 tgtgtttcaa agtcctatta gcaatggtga acctgtaaat ttcatgcaag caaaatatcg
    49801 cttggtgcat caagcagtag gttttgtttt gattgcttgt attattttta aggtatattt
    49861 gtttttctgc gataaggtaa gtgcaaaaga acgcagaagt gtatgggata tttttaatat
    49921 caaattatgg atagaacaag taaaatttta cattttctta ggaaaacacc ctcacttaaa
    49981 aggggtttat aatcctttgc aatttgtaac ttattttttc ttttatcttg taatgttagg
    50041 tattattctt acaggactta ttctttatac tcatacttat catgagggtt taggtgggct
    50101 tttatatcat attttaagac cacttgaagc tgcaatgggt ggcttggccg atgttagaac
    50161 ttatcataga attttaatgt gggtgattat gattttcgtg ccagtgcata tttatatggc
    50221 gatttttaat gcagtaaaag gtaaagatgg tgctatagac gctattatta gtggatataa
    50281 atttgtcaaa gaagagaaac attgaaattt ttagtccttg gaataggcaa tattatgttt
    50341 gcagatgaag gcttaggcgt tcatctttgc aaacaacttg aaaaaaacta caaatttaca
    50401 cattctgatt tcactttgga ttttgtcgat ggtggaactt tggctttgca acttagttat
    50461 atcatcgcta gatatgatag acttatcgtt ttggactgta tagaagcaga gggtgcgagt
    50521 ataggagatg tatttttctt tccttatgat gctatgccta ataaaatcag ctggagtgga
    50581 agtgcccatg agatagaaat gctccaaacc ctgcagtaca tggagcttgc aggagatttg
    50641 cctaaaacac atattttagc ttgtgtgcca aagcgtattg aagcgatgag ttttaagctt
    50701 tcagatgagc ttatacaagg ggctaaaata atggaaaaaa ccttgcttga ttttttaagc
    50761 aaagagggtt ttgtttatga aaagattgag gatttttctt tgcaagaatt agctgatatt
    50821 tcttataaaa atcactaaat tttagttcta aaattcatag ctttatttaa agagattaaa
    50881 tctacatttt ctaaatttac accacttgga attccttgag cgattttgct aaaagatagg
    50941 tttaagtgtt taaatttatc ttctataaaa aagatagttg catcagaatt aatgctatgt
    51001 gttaatgcaa aaatgagttc agaggtattt agtttgagta tgatttgctt aagtttttca
    51061 agtttttctt cgtttaattc atctaaaaca aaataaaatc cattataact tttgctttct
    51121 tcaagtgtta gtatgtcttt tgggctttca actatacata aaatattttt atctctttct
    51181 ttgtcactac aaatttcgca aaattcattt tcacttaaag caccacattg ctcacaaggt
    51241 tttataaagc ggatagcgtt ttctatattg tgtgcaagtt tcatgccatc gatttgatta
    51301 tttgtgcaaa tgtgataagc aagtcttata gcggtttttt ttcctatagt aggtaaattt
    51361 gcaaagcttt caacaagttc attgaatttt tctagacctt ttgccattat ttttctttat
    51421 ctccaaagaa aattttaaaa caatgcttac tatcatcata aaaataaatc agattaaaat
    51481 tatgtagctt gcatacttct gaaaccatgt aaagtcctag tcccatgcct ttgacttcat
    51541 tgtgtttttc tcttgtaaat gcttcaagat aatgttctat aggctctgtt aaaggcttac
    51601 ctggattttt aatggcaaaa cattctttgc aacaaacaag ctcacaagtg ccattatttg
    51661 aatattttaa agcattatca ataagatttt ttaaaataac agagaaaatt tctatatcaa
    51721 cattgattaa agcatcgtat cttatatcaa cttttacaac tttgttaaaa tcatctctca
    51781 taagatgttt tttagctttt tcaagtatag cgctaaaatg actaggttca aagtgcaagt
    51841 tgtagttttt tgaaaataaa ttttcgattt tagcaagttc gttgattaaa gaatccatgt
    51901 gtaaaaatat agtgacaagt cttttttttt gtttatcttc tttaatcatt tcagaaatga
    51961 ttctcccttt tcctataggg gtttttagtt catgcatgat tgttcttaag aaaagttgtc
    52021 ttgattgaat tagctcttga ttttttttaa aagctttttg aaattcaaag gcgattttac
    52081 ctacttcatc ttcttgataa tctaaaaaat caggctgttc gccgtttgcg acttcggcaa
    52141 cttgttttct taattttttt aaaggctcta aagattttaa cactgaaaaa tacataaaaa
    52201 caactagcaa agaaaaagaa aaaaatccaa tcaataaaag attgtaaacc ctatcgctag
    52261 tatttttttt atacaagcca tgaaaatctt tacattgaat atcaaaataa agattgttaa
    52321 gatattttaa agaagaaaga gtgcaaagct ttccgtcagc tttaaaaagt gattgtccat
    52381 tgtctcttat ggtttttacg agatctggat ttcgtatggc gttgaaacca ctgttttcaa
    52441 gataggcccc tatttcaaca cctgaagtat tttcatagga gatgaataaa ttttttataa
    52501 gattttcttg ttttaaggtt tcttcttcgc tgtaagcatt ttcttctatt tttaaaagaa
    52561 cgacaaaaag tacacaaatt aagaaaaaag taacaataaa taaaacaatc agtttggtat
    52621 aaatagaata attttttgtc atcctattaa tttatatcct atacctctaa cagaaaaaat
    52681 atgttttgga gatttcgaac tatctcctat ttttaccctt aaacgaccga tgataacgtc
    52741 aaggctttta gaatctttat cttttaaatt tttacaacga cttacaagct gctctcttga
    52801 aacactgtat ccgtgttgct ggataaggta ttctaaaatt tcaaactcag caggagtaag
    52861 tgttaaaacc ttatcttgat aggtgatctc atgtcttctt tcatcgattt taaaagcaga
    52921 attaatattt tcattgttag tgtgctcaac tctttttgta cgacgaataa gactcataat
    52981 ccttgcatac atttcttttg gatcgtaagg ctttggtagg taatcatcag cgccgatttg
    53041 gagtcctaca accttatcac ttaagtcacc cctagccgat gagatgataa taggaatatt
    53101 atttttttgt ctgatttctc tacaagcttc aagaccatca attcctggta aggttaaatc
    53161 taaaattaga caatcatagc cttgaatgcc tacatttaaa gcacttttag gattttcaaa
    53221 atttgtgatt ttgatattaa actgtgctaa atattcagat aataattgtg caaaatcagg
    53281 atcatcttct atcatcaaca cattaatcat tttggtatcc ttttaaattt ttatctaagt
    53341 ttacataatt ttatttaaaa tt
//
LOCUS       DAPWAA010000003        48849 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.003, whole genome shotgun sequence.
ACCESSION   DAPWAA010000003 DAPWAA010000000
VERSION     DAPWAA010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 48849)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 48849)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..48849
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.003"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..806)
                     /locus_tag="RTF91_000154"
     CDS             complement(<1..806)
                     /locus_tag="RTF91_000154"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDZ4943093.1"
                     /translation="MQIVQTLETINVNTDDISVFQYFKDLITKNFTKVVGRKNKIFSF
                     FEENEIPQRRYFLKLLDQKYRKSTNESIENLQDAHFKTFRLNFEQSNMLKPMLFIKID
                     FVAGRILMKLSSNEKLFVTYIRNYFQDHNIEYNEMTNILILEYKNENTFELFEAFADE
                     SEHLKYCVNFEVDREEYKKFRQNIHNKENMKWKFNALAKLFSNYFNTLECTPQNDLSE
                     IRQKYLILVKLYHPDFYQGKSAIEKAYAREQFEKIQIAYDNLKALYKNNT"
     gene            complement(807..1526)
                     /locus_tag="RTF91_000155"
     CDS             complement(807..1526)
                     /locus_tag="RTF91_000155"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HDZ4943094.1"
                     /translation="MLEIGFCTLEDQCPYLKDKRSRIEYKYIENCPKEINNELIKRGW
                     RRFGRYFSRPICKDCNECLSLRILVNEYHFSRSERRVMNKNIDTKVILRTPNLSNEHL
                     FLYDKYHRFMEEKKNWKRYDLSFKQYYNLYVDGFMNFGYELAFYIEGKLVCVDLIDIL
                     KDGISSIYCFYDPDFLYFSLGKFSLLNEIQIAKKMNLDYIYLGYFVKKCQSLSYKADY
                     TPNEILKGTRELFENEVLWEK"
     gene            complement(1526..1771)
                     /locus_tag="RTF91_000156"
     CDS             complement(1526..1771)
                     /locus_tag="RTF91_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943095.1"
                     /translation="MDFLDSLKSIKKEMQANAPKLTKKSSKSGTSVKKIEKLAKNIRE
                     KNQETNLDKEMQEIFLKQEKLQDEFSEFIKNTDIKKI"
     gene            complement(1772..3217)
                     /locus_tag="RTF91_000157"
     CDS             complement(1772..3217)
                     /locus_tag="RTF91_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase subunit A"
                     /protein_id="HDZ4943096.1"
                     /translation="MNQIHKILIANRAEIAVRVIRACRDLHIKSVAVFTEPDRECLHV
                     KIADEAYRIGTDAIRGYLDVDRIVEIAKACGADAIHPGYGFLSENYEFAKACEDAGII
                     FIGPKSEVIHKMGNKNIARKLMAKNGIPIVPGTEKLNSYSLEEIKIFAEKIGYPIILK
                     ASGGGGGRGIRVVHKEQELENAFESCKREALTYFNNDEVFMEKYVVNPRHIEFQILGD
                     NYGNIIHLCERDCSIQRRHQKVIEIAPCPGISDNLRKTMGVTAVAAAKAVGYTNAGTI
                     EFLLDDYNRFYFMEMNTRIQVEHPITEEITGIDLIVRQIRIAAGEILDLEQSDIKPRG
                     FAIEARITAENVWKNFIPSPGKIGEYYPALGPSVRVDSHIYKDYIVPPYYDSMLAKLI
                     IKATSYDLAVNKLERALKEFVIDDIRTTIPFLIAITKTREFRRGYLDTSFIETHMQEL
                     LEKTEDRHQENKEEVIAAIAATLKKIRESRE"
     gene            3355..4518
                     /gene="ftsW"
                     /locus_tag="RTF91_000158"
     CDS             3355..4518
                     /gene="ftsW"
                     /locus_tag="RTF91_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HDZ4943097.1"
                     /translation="MVADKRLFYLSCILITIGIVFSYSLTAFTVLFLDYSEFHFFIRQ
                     LFFGISGILIMFFISRLDPDKTLSKKIILAILIISFMFIIILPFLPSTLATASGGAKR
                     WIRLGPLSISPVEFFKIGLIYFLAWSYTRRIDDSKKAIRHEALILLPYCILASIVIGY
                     IYITQNDLGQSVISFFLILALAFFAGASKRLFAFGILIIMMIGIMVIFSNQRRIQRIS
                     SWWGNIQDAFLPMLPDWLANTLRVSSNSEPYQISHSLNAIAHGGMFGEGLGLGTFKLG
                     FLSEVHTDFVLSGITEEIGLLGLGVICYIYLWMILRIFRIAGRCEAKQDFIFCSGIAL
                     LLLFSFFMNAFGIISLTPLKGVAVPLLSYGGSSMWAICIGIGYVLMISKKVKL"
     gene            4515..5543
                     /gene="murG"
                     /locus_tag="RTF91_000159"
     CDS             4515..5543
                     /gene="murG"
                     /locus_tag="RTF91_000159"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDZ4943098.1"
                     /translation="MTIALTGGGTGGHLAIVRCLLESAIKKNIGCVYIGSQNGQDKAW
                     FENEIRFKAKFFLSSKGVVNQKKFGKISSFLHTLKLSKDCKEIFKKYQIEAVFSVGGY
                     SAAPASFAALFSRLPLFIHEQNSKSGSLNILLKPFATKFFSAFEEEFSPYPVANIFFD
                     NARIRKELKNIIFLGGSQGAKFINELALNLAPKLQEQGIKIIHQCGKNDFEKCKKHYQ
                     NLNIQADVFDFSSNLEEKMKNADLAISRAGASTLFELCANTLPAIFIPYPYAIKNHQY
                     FNAKFLQDQALCQIFTQDTIKLDEFLKAMLKLNLEDISTRLQNVIQKNGGDILIQKAL
                     FDDLTFVR"
     gene            complement(5514..6677)
                     /locus_tag="RTF91_000160"
     CDS             complement(5514..6677)
                     /locus_tag="RTF91_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CynX/NimT family MFS transporter"
                     /protein_id="HDZ4943099.1"
                     /translation="MASFKKIFWINAAIVIIVAFNLRAPITAVGPIIDIIKDKYYLNS
                     TVAGILTSLPLIAFGSISFVVGYFSPIRAIIFGIFLIFLGEIIRSYFGVYGLFLGMLA
                     IGCGIAIANVLLPSFVKEKFPKKMASVMGIYSLTLSISSIMGIALAIPLFSVFDLAGA
                     MVFWAIFSFIALVVYYPQAKNGRFFRSRNKSSKKINLFANLTTWKITLFMGFQSFLAY
                     SLFFWYVQIVVEKGFDKEFATNMILFAQIVAVPISLFGPLLLGKLRQNLHTFYIASLC
                     GMYVIAFVMLFIFDSKISIIISAFIMGFPWGGVFGIALLFIAQKSSNTQVAAKLSALA
                     QGFGYLIAAQGQWIIGFLHDKFENFSLAILMLIFVGILVNVFGYLSYKSQIIK"
     gene            complement(6699..7522)
                     /locus_tag="RTF91_000161"
                     /pseudo
     CDS             complement(6699..7522)
                     /locus_tag="RTF91_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344436.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            complement(7587..8477)
                     /locus_tag="RTF91_000162"
     CDS             complement(7587..8477)
                     /locus_tag="RTF91_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDZ4943100.1"
                     /translation="MEQILSLPQDLKRLKGIDYKNSKSCTFAKYTQTNASHSSFVNVG
                     SHLLTFVRKGYKILHTASKDYKIDSYEALFLKAGNYTLSNVGLSNGIYEAYLFFFDNA
                     FLIELIYKYKDFFKLDQESQESEIFWVKNDKILQGILESFAPHFDENTQILDPIVSLK
                     FEEIFLHLLLNKNTHFISFLAGILKEFRLDLSQLFEYCGREFLSVGEMADFAKLDFAT
                     FSREFKKCFKQSPKKWLDEKRLQKAKILLEFSKKNINEIANECAFSSVAWFIERFKDK
                     YKQTPKQYQKSKNLYFLSKN"
     gene            complement(8492..9097)
                     /locus_tag="RTF91_000163"
     CDS             complement(8492..9097)
                     /locus_tag="RTF91_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDZ4943101.1"
                     /translation="MWDKKIIAISDRKCVEIDFLKQIEKLAKSKVDAIVLREKDLSEF
                     EYYDLAKEVLGICAKQKTTCFLHSFDKTCLKLGHRYFHAPLALLRKESRLTKYFHVFG
                     TSVHSKEELLEAMSYRVNYAFVGHIFQSSCKADLEPKGLDFLKSLLRFSQIPLYAIGG
                     INDQNIASFKGLNIAGVCMREILMQEKDTKKYLMECKRKLY"
     gene            complement(9087..10232)
                     /gene="thiH"
                     /locus_tag="RTF91_000164"
     CDS             complement(9087..10232)
                     /gene="thiH"
                     /locus_tag="RTF91_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HDZ4943102.1"
                     /translation="MQDYMQYLPHMQEIKSEILSKVLDEVQNYDESQFSAKEVKEALN
                     QTHLSIENLKALLSSATEDFIEELAFKSAKSKQKYFGNSISIFTPLYLSNYCNSKCVY
                     CGFQKGNKITRAKLSEAEIHEEMQAIAKSGLEEILMLTGEGREFASVEYIANACKIAR
                     EYFKVVGVEIYPMNEEEYKILHENGCDYVTVFQETYNPLKYSKIHLGGEKRIFPYRFN
                     AQERALKAGMRGVAFGALLGIDDFRKDALATALHAHFLQQAYPHAEISISVPRLRPII
                     NNAKIHPKDVSEKRLLQVLCAYRLFLPFAGITISSRERVGFRDEVIKLGATKMSAGVS
                     VGIGEHKGEKKGDEQFEISDDRSVDEILIMLKRSNLQAVMSDSIYVG"
     gene            complement(10235..11011)
                     /locus_tag="RTF91_000165"
     CDS             complement(10235..11011)
                     /locus_tag="RTF91_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HDZ4943103.1"
                     /translation="MQENLKNDKLKIGKYEFDSRFILGSGKYSLELIKSAIEEAKAQI
                     ITLALRRANTGEIANILDYIPKNITLLPNTSGARNADEALRIARLSRELGCGELIKIE
                     VISDSRYLLPDNYETIKACELLAKEGFTPLPYMHADLYAARAMRDAGAAAIMPLAAPI
                     GSNKGLCAKEFIQILLNEIDLPIIVDAGIGSPAQACEAMQMGVSAVMVNTAIAEAKDI
                     VLMAKAFSLAVNAGRAAFLAGLASVSEAKVSSPLTGFLRD"
     gene            complement(11014..11817)
                     /gene="thiF"
                     /locus_tag="RTF91_000166"
     CDS             complement(11014..11817)
                     /gene="thiF"
                     /locus_tag="RTF91_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine biosynthesis protein ThiF"
                     /protein_id="HDZ4943104.1"
                     /translation="MMKVKFNGKELDTAFKTSLEFFKNISKNENDVWIINGFATKENI
                     ALNENDELFCIERNSLPPKDALDAMMRARHTPKLHDKLKKASVAVCGLGGLGSHIAIN
                     LARSGVGYLKLIDFDVIEPSNLNRQAYRVSDLGKFKTEALKDQISEINPYISVEICTL
                     KIDEDNLKSLFKGIDIVCEAFDGAIAKAMMAQNFHRFYKDSILICASGLAGYGDSNSI
                     QTRKIAKNFYVCGDLVNGAKLGNGLMAPRVNICAGHQSNLVLELLANKE"
     gene            complement(11814..12005)
                     /gene="thiS"
                     /locus_tag="RTF91_000167"
     CDS             complement(11814..12005)
                     /gene="thiS"
                     /locus_tag="RTF91_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HDZ4943105.1"
                     /translation="MIINGEKFEFKELRFMDFIQEKGFKIELIALELNGEIIPKSEFE
                     NLILKENDKAEIVNFVGGG"
     gene            complement(12002..13432)
                     /locus_tag="RTF91_000168"
     CDS             complement(12002..13432)
                     /locus_tag="RTF91_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDZ4943106.1"
                     /translation="MNLNQTLQEKYPYLEISVLKLSEAQKDNESKRIDSEFFKKEYFD
                     AMETIQLNQVEYLGDNMKFNSRYSQPKYDETSKMKVINSQYIRNEYIDYENAKSGYGK
                     IVPKESVLINATGVGTLGRVFINILDFDFSIDSHINVIVVKNKTYLNPYFLTIFLQSY
                     YGQIQIIRYYSGTSGQIEIYPRDFNYFKIPILPIEFQLEIQNLVKDSHKALEESKELY
                     KKAEETLYLELGLDPKNPLQSLLDSKIDHSTKSLNISIRTLKESFLKTGRLDSEYYQK
                     KYEINEKIIMNKKYTVLDNLVSITKSIEPGSNLYKNKGIPFIRVANLTQYGLSEADVF
                     LDEKDFFPQYLQILYPKKDTILFSKDGSIGVAYCVKEDKEVITSGAILHLNIKDKENI
                     LPEYLTLFLNSIFVKLQAQRDCGGSIISHWRIEDIKKVLVAILDIKTQEKIAKYIQES
                     FDLRKKSKQLLDNAKIKVEEQIQGKV"
     gene            complement(13557..14060)
                     /locus_tag="RTF91_000169"
     CDS             complement(13557..14060)
                     /locus_tag="RTF91_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943107.1"
                     /translation="MYHLLDFSTCKCENEKFDLAYKIFKQDFIEAPLYLAGCIYIDPQ
                     SHKKHKVKEKIFWHITTRENKQNKTREFDSQRACRINWIKQIILNHTHPEIKAFYYKE
                     KRAIRFYLWLHNYNFIVILQKLGRSSSFLVTSFYIDKGYNKNTYEKRYRNYINGNDIE
                     LKNCEWF"
     gene            complement(14060..14785)
                     /locus_tag="RTF91_000170"
     CDS             complement(14060..14785)
                     /locus_tag="RTF91_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HDZ4943108.1"
                     /translation="MDNMKEFKIFCDESNHLSYKDNLTLCSKVMVLGALKVPSSEIIK
                     INKTIKYLKHKYKYNKEIKWTKLNISQKYFYDELLEFFFSSVHMWFQAILIPDKKNLR
                     HDVYNQGSHDLFYYKMYYQVLRNLIEIDTSIKIYLDYKDTRSGNKIKELGNVLHNKFK
                     KSIDMKIFTIQSHESNIVQLVDLLIGAISYKARDDIEHTSEIKNYIVDKIENIANIEL
                     DKGTPPWENKFNIFRIQLSKGEQ"
     gene            complement(14790..16853)
                     /locus_tag="RTF91_000171"
     CDS             complement(14790..16853)
                     /locus_tag="RTF91_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDZ4943109.1"
                     /translation="MIEEILKDSDYKLDLFSKKAIAELETKIIAKTNKNNQIIYYASC
                     LIRDKEIKLTPEEIVRQLYIDKLLNEYNYPKDMIKIEFGVHFGREVKRADIVIMDKIQ
                     ITTPYIIIEVKKPKLKDGKEQLKSYCNATGATMAVWCNGKEISYYHRKDPNYFESIPN
                     IPASNQTLPDLLKVKFTFDDLIKEDILKSQKRSLKNLVTEMEDEVLANAGVDVFEECF
                     KLIFIKLFDELEGARDRTKSLEFRNYGESDSELKQKIEKLFDKAKKKWEGVFNNDEKI
                     KLSPSHLSVCVSSLQNVKLFNSNLEVIDDAFEYLVNKSSKGEKGQYFTPRYVIDMCVK
                     MLNPKKDESIIDTASGSCGFPIHTCFYVWRSIYKERGIEASHLFTAQEKISECQDYVK
                     EKVFGIDFDEKSVRVSKMLNLIAGDGHTNVLYLNSIDFDRWDEWVKDDEDWQDVYFEG
                     FKRLKNLRVTKNQNRDFNFDVLMANPPFAGDIKESRILARYELGKKENGKPQSKVGRD
                     ILFIERNLDMLKPGGRMAIVLPQGRFNNSSDKYIREFIAQKARILAVVGLHGNVFKPH
                     TGTKTSVLFLQKWDDKLCPKCEDYNIFFATMSEPSKDNSGEKIYYPLLDSHDHLVVKH
                     DLFHPHLEGDEPIKQKDESQEEFDKRIQEYRLNVEKYKDLQKDGIAEAFIEFAKAQNL
                     SFWKE"
     gene            complement(16863..17960)
                     /gene="dapE"
                     /locus_tag="RTF91_000172"
     CDS             complement(16863..17960)
                     /gene="dapE"
                     /locus_tag="RTF91_000172"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDZ4943110.1"
                     /translation="MNAKEFLIELLKFKSVTPNDDGALNFIAMELSDFEVFFIEEKGV
                     KNLLLTKKFKDEGEHLAFGGHVDVVPAGEGWSSDAFVPVEKEGFIYARGAQDMKSGVA
                     AFVDAVKNADFKGARLSLILTSDEEGEAIYGTKAVLEWMQERNMLPDYAVVAEPTCMK
                     KIGDSIKIGRRGSINGKLLIRGKQGHVAYPEKCINPVHDFAPVLKLLAGFDLDPGSAE
                     FSPSKIVITDIRGGMGVCNVTPNDLKLMFNVRNSPDTSLEDVKSYVEKICHGLNYELE
                     LKQSSEAFLTNIDNKIVQKMNESVQKITHEVPEFNTKGGTSDARYFAKYGVKVVEFGV
                     CNDRIHAIDERVSIEEFEKLCLVFKDLIENF"
     gene            complement(17964..18560)
                     /locus_tag="RTF91_000173"
     CDS             complement(17964..18560)
                     /locus_tag="RTF91_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HDZ4943111.1"
                     /translation="MFDSFLSGVFLGFGVSVPFGPVNIVILTYALKAFKNSIAVGFGA
                     FSVDMLYLCLLQFGLLNFLNNVIFMCSLAIFSFCFLTYMAYLMLRKKESLSVEHKEIE
                     ESLFKSYIKGAFLNGSNPFVIGFWLSIASVVLSSDHAYLMTLGLIMAILSWVGALAFV
                     VARYSHVFSAKVVFIINIVSVIVIECFALNLLYKTFLG"
     gene            complement(18553..19254)
                     /locus_tag="RTF91_000174"
     CDS             complement(18553..19254)
                     /locus_tag="RTF91_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HDZ4943112.1"
                     /translation="MKNIMILSGAGLSAPSGLKTFRDNGGLWQDYDVMEVCSATGFRK
                     NPKKVLDFYDARRLELANVKPNHAHKQIAKLKEKWGKNLFVLTQNVDDLLERAGCKDV
                     VHLHGFLPELRCLKCEEIFNIGYEKIENKICPKCKSQNLRHNIVMFEEQAPAYTTLYS
                     LLGQTSLFISIGTSGAVLPVGHYASMCEKSILNIYEKDAKLERYFDKIYIEDILSSID
                     KIALDIENFMKDGNV"
     gene            complement(19297..23104)
                     /locus_tag="RTF91_000175"
                     /pseudo
     CDS             complement(19297..23104)
                     /locus_tag="RTF91_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872512.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
     gene            complement(23113..25323)
                     /locus_tag="RTF91_000176"
     CDS             complement(23113..25323)
                     /locus_tag="RTF91_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HDZ4943113.1"
                     /translation="MMNDTKEELNSKLDLNSYLEEFKTFFARDKEIFLQGDSKLHFKR
                     IHELCEVEFPSMPELSNLDKALVHLNKQGILHLDEIFEFVKILRYFEKLKKLKLGTNL
                     DSWLQKIEFVSGALELCLNFDEKGELKESLDERLVNLNTALRLKNESIIAEFKKFCYA
                     KALTPYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSSSGGFYIVPLSVENLQNDI
                     EKIKNQKEEIYYEYAKNFSAFLAKNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVL
                     CDQSTDLVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSMLLKSILSAAFLAKH
                     LLPMYIKASESKIGTFKEFDAIIEDPQNVKNDISTFAGRMLHFSKLFSKKNLLLGIDE
                     IELGTDFEEAACLYSVLILKLIANNLKIIITTHHKRLAMLLAKNEQVELIAALYDEEL
                     SRPKYEFLKGTIGKSYAFETALRYQIPPNLVGEAKKLYGEDKENLEELVGKNINLELE
                     LKAKLQNVEKKEQKVDEILLSLKDQKEKNEQEFRMSLRNLEFKFHKAIEEAKKTIQLK
                     DTKDKQRSLNKANELKKEIIFPSMEQNEELRVGDFVKYEKIKGKIIGISKNDAMVESD
                     GIKLRVPLKLLKKSSSTPKISSKTSINVVKPTNLSVSLDLHGLRSDEAILRLDKFISD
                     ALIAGFDEVLIYHGIGTGKLAFAVREFLKTHKSVKSFSDAPINQGGFGAKVVKL"
     gene            complement(25313..25663)
                     /locus_tag="RTF91_000177"
     CDS             complement(25313..25663)
                     /locus_tag="RTF91_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943114.1"
                     /translation="MSRILLYLLIILILALITFALRKKLGKKTKPFFGILLVIFVVLA
                     VFFEFENTQKSHLRIDIIVAFNQNKNILCKDINVSRAYFNYEFGTGSFISKDNNQSFN
                     SLIIDIKDCRLNDE"
     gene            complement(25656..26954)
                     /locus_tag="RTF91_000178"
     CDS             complement(25656..26954)
                     /locus_tag="RTF91_000178"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDZ4943115.1"
                     /translation="MMQNIHFIGIGGIGISALARFLKEKGFKISGSDLKESKITKELE
                     KEGVKVEIPHHKDNILGKDLVVYSAVIKEENPEFKHAKELGIKCLSRKEALPLILEDK
                     RVFAVAGAHGKSTTSSILASLIDDASVIIGAILKEFGSNMIYKESQNLVFEADESDSS
                     FLNSNPYLAIVTNAEAEHLDHYGNEVSKLHHAYTEFLNTAKIRVINAEDEFLKSYQNE
                     VIKLYPSKDIKNCTMFIENFKPFTSFELKDWGEFRVFGMGYHLALDASLSILAALNFL
                     DIETIRTRLKNYQGIKKRFDILYADENLVLIDDYGHHPTEIKATLSAAQEYARLGGYK
                     KITAIFEPHRYTRLAANLGEFAKTFEGVDELVILPVYAAGEEPIDLDLKAVFPKALFV
                     EDIKREGKFLVASKGQVFEEGLIIGFGAGDISNKLRQKNE"
     gene            complement(27018..29001)
                     /locus_tag="RTF91_000179"
                     /pseudo
     CDS             complement(27018..29001)
                     /locus_tag="RTF91_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780281.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
     gene            complement(29024..29800)
                     /locus_tag="RTF91_000180"
     CDS             complement(29024..29800)
                     /locus_tag="RTF91_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HDZ4943116.1"
                     /translation="MSKIAALQFPTLALSESRLDYYLKASKDNGANLVVLGEYVINSF
                     FTELLHMPKNMIKEQSETKKESLIKLSKKYELEIIAPYISVEAKSYKKLCLKVTPNSV
                     KSYEQQILMPYEHWNEEKFFSNKIQAELKIFTFNYEKLKCALLFGFETHFDIFWQQIM
                     AKKIDLVIVPSACTFESKQRWEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTMFI
                     NAFGEIESKLGFEEEMLIIEPKKSDKARKLWGFDKILRNI"
     gene            complement(29793..29966)
                     /gene="xseB"
                     /locus_tag="RTF91_000181"
     CDS             complement(29793..29966)
                     /gene="xseB"
                     /locus_tag="RTF91_000181"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDZ4943117.1"
                     /translation="MSFEENLKHANESLEKLNNQDLALDESVKIYKEGLESIKKARLE
                     LEKAKLEVEQIDE"
     gene            complement(29963..31420)
                     /gene="guaB"
                     /locus_tag="RTF91_000182"
     CDS             complement(29963..31420)
                     /gene="guaB"
                     /locus_tag="RTF91_000182"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDZ4943118.1"
                     /translation="MKIVKRALTFEDVLLRPGYSEVLPREVKIHTKLTKNITLNIPLI
                     SAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSESGVIIDPIFVNPK
                     ASVAKALEIMAEYRISGVPVVDENQKLIGILTNRDLRFESDFSNLVENIMTKMPLITA
                     PKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKKRKEYPDANKDNFGRLRV
                     GAAIGVGQMDCVDALVEAGVDVVVLDSAHGHSKGIIDTVKAIKAKYPNLDLIAGNIAT
                     AAAAKALCEAGVDAVKVGIGPGSICTTRIVSGVGVPQISAIDECVEEANKFGVPVIAD
                     GGIKYSGDIAKALAAGASSVMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSLGAMQK
                     GSLDRYFQQGTAQDKLVPEGIEGRVPYVGSIRSVVHQLLGGLRSSMGYVGAKDIENFQ
                     KKAEFVEITTAGLKESHVHDVTITHEAPNYKVNHQ"
     gene            complement(31430..32791)
                     /gene="gatA"
                     /locus_tag="RTF91_000183"
     CDS             complement(31430..32791)
                     /gene="gatA"
                     /locus_tag="RTF91_000183"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HDZ4943119.1"
                     /translation="MITLKEALKYSKEELENLKKELNEKAKKEKKLGAYIEQFLDKDL
                     SVSGEGVPVAIKDNISVKGWELTSASKILQGYIAPYDASAIVNLRANGFTPFGRCNMD
                     EFAMGSSTASSCYGRTLNPLNFECVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPA
                     AFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSV
                     NIEFIKTAPNLNANKKLKITVIENYVNDADSEVKNALLKTIDMLKANGHEIVYKNLLD
                     SKFDIAAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRI
                     LLGTFVLSSGYYDAYYIKAQKTRAFIKAKYEEILQECDLIFMPVAPTTAFKFNTQKSP
                     MQTYLEDVYTISVNLAGLAGISVPVAKDKDGLNISAQLICKAYDEQTLLDGALSLEQM
                     IKN"
     gene            complement(32788..32898)
                     /locus_tag="RTF91_000184"
     CDS             complement(32788..32898)
                     /locus_tag="RTF91_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943120.1"
                     /translation="MLENPIPNSFIIVTIVVVLAFSALAVFLIKKTKEDK"
     gene            complement(32892..35645)
                     /gene="ileS"
                     /locus_tag="RTF91_000185"
     CDS             complement(32892..35645)
                     /gene="ileS"
                     /locus_tag="RTF91_000185"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDZ4943121.1"
                     /translation="MDYKETLLLPSTTFAMRANLAEFEPQRFKKWFEQNYAYEKMKEN
                     RKNTKKSFTLHDGPPYANGHIHIGHALNKILKETIIKTHYFKGESVRFTPGWDCHGLP
                     IEQQVELKLGEKKKSLSKKEIREFCRQHASEFVDIQREEFKNLGIIADWDKPYLTMKF
                     EFEAAIYRTLCEIAKKGLLCERSKPVFWSWAAKSALAEAEVEYQDKEDYSIFVAFDLD
                     VNACEKLGVSKASAVIWTTTPWTLVANQAIALNPNENYVITKEGLIFASALLKSMVEK
                     GLTSGEIQKELNAKEFEKLEAINPLNGRKSILIMGEHVLMDGGSGLVHTAPGHGEDDY
                     YACLKYGIEVLMPVDDGGCYDETLRTKGLLPSHLLEEFIGLHIFKANEKILELLSSKL
                     LHSSKFIHSYPFCWRTHKPVIYRATKQWFVLMDELKLQGKTLRECAKEQLLKTTFYPQ
                     SGLKRIGAMVENRPDWCISRQRDWGTPIAFFRDKNTKEVIFDDELFEFVATIFEKYGA
                     DAWWEYEIKDLIPANSKYKAENLEKVYDILDVWFDSGSTFNAVLNSGLYDAGEKRANM
                     YLEGSDQHRGWFQSSLLVSIAINESAPYESILTHGFTTDEKGQKMSKSKGNVIAPEYV
                     AKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQYRKIRNTIRFLLANTNDLNDLKV
                     KEFSFIDKWILSRATKVFKAAKEAFFAYEFSKGFSLLLNFLSADLSGIYLDISKDRLY
                     CDNENAQRRKSAQVAMALIAKELLNLLAPSLSYSVDEALEHANILIKGDAKDVFDLSL
                     TEDFDYDFGIDDAFLMSAREKFFEQIDMLKKDKIIKSTLELNLNVNFDKFPNEELADW
                     FMVSQITNENEEILAEFYIENEKFKITKASLYKCPRCWKFQSKSEDTPCLRCEEVLKG
                     VKC"
     gene            35743..36831
                     /locus_tag="RTF91_000186"
     CDS             35743..36831
                     /locus_tag="RTF91_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HDZ4943122.1"
                     /translation="MKHLLYLIGDELTINENFKNYIYRTYEEKFKEINEIRIQNKTDK
                     DLPFLLENLLNEYDFITLFTSPLHYATVAKVLATLNDDNLILKDNTLVPDKAEFSKNS
                     FVCNFLNSKINVIKINPSEKLPNLLGDIKLNFAYFCIFGMDDESAILLLQTLTKSYEI
                     SIKSSKLLDNLVLIKATCAHFGKLDGFLNSVKNLFGQKIFLGKDPIYFIASKLLEKKL
                     KISFAESCTGGLCASTLTKISGVSEIFEGSIISYSNRIKHEWLGISEGILENKGEYSE
                     RCVYFMLKGIFKTANPDFALAISGVAGEEDEGKIKSGTIYIGAMFKDGTFIQETLYLD
                     GDRKFIQEQAVLATFCLLLKLKPEIFEI"
     gene            37049..37669
                     /locus_tag="RTF91_000187"
     CDS             37049..37669
                     /locus_tag="RTF91_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDZ4943123.1"
                     /translation="MDFKELILKRRACKLFNDKKINEKDLYFILESGVLTPSSYGFEP
                     WKFVILEQKEHNLKLSTLCYNQQNVASASHNIIFLARKDLQSKDEFAQKQVRRFSGSN
                     EENFQKILEIYTHKTNTMSDNELYHYAQLQCYLAMMQMSLAAISLGIDSCMIGGFEKT
                     KVDDFLNLTYPFETAVILSLGYKAHEPKYHTQRLNFDEVVEFYKEK"
     gene            37669..38274
                     /locus_tag="RTF91_000188"
     CDS             37669..38274
                     /locus_tag="RTF91_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDZ4943124.1"
                     /translation="MKKELEIFSTRYSCRNFKNEKLKEENLNSILEMARLSPSSLGLE
                     PWKFIVTQDEKKKEELSQICNQQKHVKDCAALIIIISKLDFLDYFEEKLRKRDMSEIE
                     IQKRLDTYMPFLKSLNKEQKISYAREQAHIALASILYSANALNIASCTIGGFDKEKLD
                     SYLLLDTQKERSSLVVALGYCNDEKIPQKNRFNFDEVVKFI"
     gene            38401..38937
                     /gene="pgsA"
                     /locus_tag="RTF91_000189"
     CDS             38401..38937
                     /gene="pgsA"
                     /locus_tag="RTF91_000189"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDZ4943125.1"
                     /translation="MNLPNILAIFRMVLAPLLFFLLSYKFENIHQSWINYFAALTFSL
                     AALSDFFDGYIARTWKQTTKLGEILDPLADKMLVLAAFLGLLLTGKANEWVVYIILVR
                     EFFITGFRVAMISENLNVNASFAGKLKTAFQMTAIGFLIMEWIGGEILLYIALILTLY
                     SGFEYIYTYTKAQKKGRE"
     gene            38934..40040
                     /gene="rseP"
                     /locus_tag="RTF91_000190"
     CDS             38934..40040
                     /gene="rseP"
                     /locus_tag="RTF91_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDZ4943126.1"
                     /translation="MKSLLFLIVIIILGIKFYSIEFLATILVISFLIFFHELGHFLAA
                     RSLGVKVEVFSIGFGKSLIERNFKGTNYRLSALPLGGYVKLKGQDDMRPGFENLDKDS
                     YSILSPFKKIYILFAGPFFNLILAFFLYIIIGNLGINKLAPQIGNIAPNSAAQQAKLQ
                     KNDIILEINDIKIQSFDEIPKHLSLEPLKILINREGKNLEFVLTPKLGQGYNDFGQII
                     EKPQLGVSPNGASTLVKHQGLESLRYAVQESFQASTLIIKGIGKLISGEVDAKNLGGI
                     ITMTEITSKAAQNSFTLLLFITALISINLGILNLLPIPMLDGGHILFNLYEIIFRRKV
                     PQRAFEYLSYAGMVVLLSLMLFATYNDISRIIGE"
     gene            40033..40905
                     /locus_tag="RTF91_000191"
     CDS             40033..40905
                     /locus_tag="RTF91_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK family antimicrobial peptide resistance
                     protein"
                     /protein_id="HDZ4943127.1"
                     /translation="MNKKFSYPTPNFTDKRKSIIFWRYLRFQARKILYFPQIRLLEKT
                     LNDKKNKHLKDFFSQRPYACYNVARRFCDKSFKANERIKTLIYDVNKGLTCFKFLPKE
                     QLVFSFGEDFELFLGYNHHVCEEGFWAFSLKFKKHTILQCSFCFTLENNLLLSCIQGY
                     KYKDFNTLEINKILTKKCYGLRPIALLIECTKILCEILKLQATLGVHEKNQIRSEKGK
                     NKGYFIDYKKIWLENGGELVKINKHNYYKLSHSQKSLEEIPSQKRSMYKKRFTMLEGI
                     RQNLKNLFRYQINH"
     gene            complement(40883..42238)
                     /locus_tag="RTF91_000192"
     CDS             complement(40883..42238)
                     /locus_tag="RTF91_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDZ4943128.1"
                     /translation="MKHYEVIIIGFGKGGKTLAAKLAMLGKKVALIEEDENMYGGTCI
                     NVGCIPSKSLVKNSLCADKNANWEIKQNFYYNAILEEKQLSAMLRQKNYDKLNALENI
                     TLYLGKASFINEKTLLIQGEKEVQISADRIYINTGSIPIIPDIKGLDQSKNVLTSKEL
                     MAQENLPKHLVIIGGGYIALEFACIYANFGSKVTLLQRNDTFLGKEDKDFADLIFQNL
                     ENKQIDIRLGVQFKEIKDFDQKSIVFFTQDHQDFEIECDMILLATGRKANTLGLSCDK
                     AGIQLDKRGFIIVDDTLKTNKDSIYALGDVNGGLQFTYVSLDDYRIAYAPFRQQNYTK
                     SKRKVIPYSVFIDPPFSRVGLNEKESIDAGYRIKVVKLPVVAIPKAQVLKKTYGLLKA
                     IINEENDEILGAMLFCEESHEMINIVKLAMDTNLKYQVLRDQIYTHPTMSESFNDLFD
                     I"
     gene            complement(42253..42690)
                     /locus_tag="RTF91_000193"
     CDS             complement(42253..42690)
                     /locus_tag="RTF91_000193"
                     /inference="COORDINATES: protein motif:HMM:NF015581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HDZ4943129.1"
                     /translation="MKKILVLLFMCFSSLFANDDFIYEKSKYNFNELIKRVEQELKDR
                     NLTIFAKFDHYQNALDVNLTLKSNTVIVFGNPIVGTYLMQENPMIGIELPLKILIWQD
                     QNNETFIGYVSLKSKIQKYHIKNTVLVDKIDSLMKDIINISKK"
     gene            42918..43295
                     /locus_tag="RTF91_000194"
     CDS             42918..43295
                     /locus_tag="RTF91_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDZ4943130.1"
                     /translation="MKHYEVLFILKPTLTEEEVNAKLEFVKEVLIKNGAEIETVVPMG
                     TRKLAYKIKKYERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAW
                     EKLSHGIKQSKKEIKPLDAPEIQ"
     gene            43304..43855
                     /locus_tag="RTF91_000195"
     CDS             43304..43855
                     /locus_tag="RTF91_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDZ4943131.1"
                     /translation="MFNKVVLVGNLTRDIEMRYVQNGSAIGSSAIAVTRRFTTNGEKR
                     EETCFIDISFYGRTAEVANQYLAKGSKVLIEGRLRFEQWSDQNGQNRSKHSVQVENME
                     MLGNSNTSQQGGNFGNNSFSNNNYNGNYENQSYDPYMSENQNFNKTKSNPAPQRNQNP
                     QHEEKLKEIDIDAYDGDDTNLPF"
     gene            43866..44126
                     /gene="rpsR"
                     /locus_tag="RTF91_000196"
     CDS             43866..44126
                     /gene="rpsR"
                     /locus_tag="RTF91_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDZ4943132.1"
                     /translation="MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRR
                     LTGTSKKYQEMVEVAIKRARHVALIPYIVDRKEVINNPFEGL"
     gene            complement(44188..46563)
                     /gene="lon"
                     /locus_tag="RTF91_000197"
     CDS             complement(44188..46563)
                     /gene="lon"
                     /locus_tag="RTF91_000197"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDZ4943133.1"
                     /translation="MQIEEIQNYPANLPVLVEDELFLYPFMITPIFINDSSNMKALEL
                     AIKNDSMLFVAPSKLENGRNFDEIYNCGVIGTIMRKVPLPDGRVKILFQGYAKGKIIE
                     QISNKPLEAKIELIKEDFLEGTKKEALLEVLKEKIKNLANISYYFSPDLLRTIEEGFD
                     ASRICDLILNTVRIKKQVAYEFFILTDLEQKLLKLIDLIAQEIEANKIQKEIKNKVHS
                     RIDKVNKEYFLKEQLRQIQKELGSDTQKEDEVREYQKRLELKKKFMHEDAYKEIKKQV
                     EKFERIHQDNSEASMIQTYIETALDVPFEKISKKKLDIKEVSKQLNHDHYALNKPKER
                     IEEYFAVRELLEKRKIAEKDGAKVILCLYGPPGVGKTSLANSVSKALKRELIRIALGG
                     LEDVNELRGHRRTYIGAMPGRITQGLIEAKQINPVIVLDEIDKLNRSFRGDPSAVLLE
                     ILDPEQNSKFRDYYLNFNIDLSKVIFIATANDISNIPAPLRDRMEFIELSSYTPSEKF
                     HIMKKYLIPDELKKHGLKANELSIDDETIELIISDYTRESGVRNLRRKVAELCRKGAK
                     KLLLENIKKVNINVKNLNEFLDKKVFEIEKNDGENQIGQVNGLAWTSVGGDVLKVEAV
                     KIKGKGELTLTGSLGDVMKESARIAFSMIKVLIDEGKIKIPKKMIIDPKVNVYDSYNI
                     HIHVPDGATPKDGPSAGITISTAIASIFSDKKVRADVAMTGEIDLKGKVLPIGGLKEK
                     LIAAYKADIKTALIPRKNYERDLKDIPNEVKDNMKIIAVDTFNDVLKYTLV"
     gene            complement(46580..47227)
                     /locus_tag="RTF91_000198"
     CDS             complement(46580..47227)
                     /locus_tag="RTF91_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDZ4943134.1"
                     /translation="MKKGIFLLVFLGIFFNACSTKNHEGLYNLSASEWYKQIIKDLQD
                     KDLEKADDHYNGMASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSR
                     NADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTKFN
                     LAVFYLDSTIENLYQRIGHDESAQIYKQRLQESEFYQQSIIKPELPWYRSIFERF"
     gene            47388..47777
                     /gene="fliW"
                     /locus_tag="RTF91_000199"
     CDS             47388..47777
                     /gene="fliW"
                     /locus_tag="RTF91_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HDZ4943135.1"
                     /translation="MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLIN
                     PYLIRPDYEFDIPTYYQELLSLTPESNMKIFNIVAIAKSIEESTVNFLAPVVINLDNN
                     TMVQVILDTVNYPDFFQADQIANYIKK"
     gene            47777..48508
                     /locus_tag="RTF91_000200"
     CDS             47777..48508
                     /locus_tag="RTF91_000200"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDZ4943136.1"
                     /translation="MLYILANGAMATALAYGLKDNYEICIVGRNIEKLQALAKEGFKT
                     LLYKDFNIKGKDVILAFKPYALENIAQMLKGQARILISVLANVDFEKLQVIKAQNYVR
                     IMPNTAAKYKASTTPYILKNSHFENEILNILKTFGSAYKLDNETQMNAAMAISGCAPA
                     FLALIAESIANAGVHEGLPKELSLNLTRSLFKSSSVLLKHEHPAIIKENICSPGGVTI
                     KGIKILEQKGIRGSFFEAINASSTK"
     gene            48505..48807
                     /locus_tag="RTF91_000201"
     CDS             48505..48807
                     /locus_tag="RTF91_000201"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943137.1"
                     /translation="MKKAFILIESISAIMIISLIFIGIFYYYTQLYKNYENLNIFERL
                     YKLQEKLYEKPIFKTIILQTSILKPIIIQEQFVSDDVFKFQKLYLQDQNYSIYFRE"
BASE COUNT        16444 a         8565 c         6053 g        17787 t
ORIGIN      
        1 taagtattat ttttataaag ggcttttaaa ttatcataag caatttgtat tttttcaaat
       61 tgttcccttg cataagcttt ttctatcgcg ctttttcctt gataaaaatc aggatgataa
      121 agttttacta aaatcaaata tttttgtcta atttcactaa gatcattttg tggagtgcac
      181 tctaaagtat taaaataatt actaaaaagc ttagccaagg cattaaattt ccatttcata
      241 ttttctttat tgtgaatatt ttgacgaaat tttttatatt cttcgcgatc aacttcgaaa
      301 ttcacgcaat attttaaatg ctcactctca tctgcaaaag cttcaaaaag ctcaaaagta
      361 ttttcatttt tatattctaa aattagaata tttgtcattt cattatattc tatattatga
      421 tcttgaaaat aatttcttat gtaagtaaca aatagttttt cattagaact taacttcatt
      481 aaaattctac ccgcaacaaa atcaatcttg ataaataaca taggtttaag catattactt
      541 tgctcgaaat ttaatctaaa agttttaaaa tgagcatctt gtaaattctc tatgctttca
      601 tttgtgcttt tgcgatattt ttggtctaaa agttttaaaa aataacgacg ttgcggaatc
      661 tcattttctt caaaaaaaga aaaaatttta ttttttcgtc ctacgacctt tgtgaaattt
      721 ttggtaatca agtctttaaa atactgaaat acgctaatat catctgtatt aacattaata
      781 gtttctaaag tttgcacgat ttgcatctat ttctcccata aaacctcatt ttcaaaaagc
      841 tctcttgtgc cttttaaaat ttcattgggt gtataatcgg ctttataaga taaagattga
      901 cactttttta caaaatatcc aagataaata taatctagat tcattttttt agctatttgt
      961 atttcattga gcaaagaaaa tttacccaaa gaaaaataca aaaaatcagg atcataaaaa
     1021 caataaatac ttgaaattcc atcttttaaa atatcaatca aatcaacaca aacaagctta
     1081 ccttctatgt aaaatgcaag ctcgtatcca aaattcataa aaccatcaac ataaagatta
     1141 taatactgtt taaagcttaa atcgtaacgc ttccagttct ttttttcttc cataaaacgg
     1201 tgatatttat catataaaaa caaatgttca ttgcttaaat taggtgttct aagtataact
     1261 ttggtgtcaa tgtttttatt cataaccctt ctttcgcttc ttgaaaaatg gtattcatta
     1321 accaaaattc taagacttaa acattcatta caatctttac aaatagggcg tgaaaaatac
     1381 ctaccaaaac gacgccaacc ccgttttatt agctcattat tgatttcctt agggcaattt
     1441 tcaatgtatt tatactctat ccttgaacgt ttatctttta aataaggaca ctgatcttca
     1501 agagtacaaa aaccaatctc aagcattaaa ttttcttaat atctgtattt ttgataaatt
     1561 cggaaaattc atcctgtaat ttttcttgtt ttaaaaaaat ttcttgcatt tctttatcta
     1621 gatttgtttc ttgatttttt tcacggatat ttttagctag cttttctatt ttttttacac
     1681 ttgtaccact cttgcttgat ttctttgtca attttggagc attggcttgc atttcttttt
     1741 taatactttt aagactatct aaaaaatcca tctattctct actttctcgt atttttttaa
     1801 gtgtagcagc tatcgcggct ataacttctt ctttattttc ttgatgacga tcttctgttt
     1861 tttctaataa ttcttgcata tgcgtttcta taaaagaagt atctaaatac cctcttctaa
     1921 attctcttgt ttttgtaata gctattaaaa atggtatcgt tgttctaata tcatcaatca
     1981 caaattcttt caaagcacgc tcaagtttat taactgctaa atcataactt gttgctttaa
     2041 taataagctt tgcaagcatg gaatcataat aaggtggcac aatataatct ttatagatat
     2101 gactatcaac tctaaccgat ggtccaagag ctgggtaata ttcccctatt tttccaggac
     2161 ttggaataaa atttttccat acattttcag cagtaattct agcttcaata gcaaaacccc
     2221 taggcttaat gtcactttgc tctaaatcta aaatttcccc cgctgcaata cgaatttgcc
     2281 ttacaataag atcaatacct gtaatttctt cggtaattgg atgttcaact tgaattcttg
     2341 tattcatttc cataaaataa aaacggttat aatcatcaag taaaaactct atagttccag
     2401 catttgtata acctacagcc ttagcagctg ccacagctgt aacacccata gtttttctaa
     2461 gattatctga aattccagga caaggtgcta tctcaatcac cttttgatgt cttctttgaa
     2521 tagaacaatc cctttcgcaa agatgaataa tatttccata attatcccct aaaatttgaa
     2581 attctatatg acgaggattg actacatatt tttccataaa tacttcatcg ttattaaaat
     2641 acgttaaagc ttctctttta caagattcaa aagcattttc aagttcttgt tctttatgaa
     2701 caacacgaat tccacgtccc ccaccgccac ctgaagcttt taaaataata ggataaccta
     2761 ttttctcagc aaaaatttta atctcttcta ggctataaga gtttaatttc tcagttcctg
     2821 gaacaatagg tataccattt ttagccatta acttacgggc aatattttta tttcccatct
     2881 tatgaattac ttcagatttt gggcctataa aaataatccc cgcatcttca caagctttag
     2941 caaattcata attttcactt aaaaatccat aaccaggatg gatagcatca gcaccacaag
     3001 ctttagcaat ctcaacaatg cgatcaacat ctaaataccc ccttatagca tccgttccta
     3061 tacgataagc ttcatctgcg atttttacat gcaaacattc acgatcaggt tctgtaaaaa
     3121 ctgcaacgct tttaatatgt aaatccctac aagcacggat cacgcgaacg gctatttcag
     3181 ctctatttgc tataagaatt ttatggattt gattcataat ttaccttttt tattattttt
     3241 atttttaatt ttagcaaatt ttccttacaa aagcttagca aaaaaattaa tttattttag
     3301 ttataataaa actttttaaa attttaattc caataaagaa aagttataat tacaatggtt
     3361 gctgataaaa gattatttta tttaagttgt attttgatca ctataggtat agtattttca
     3421 tattctctta cagcttttac tgttcttttt cttgactata gtgagtttca tttttttatt
     3481 cgtcagcttt tttttggaat tagtggcata cttataatgt ttttcatttc tcgccttgat
     3541 cctgataaaa cactttctaa aaaaattatt ttagctattt tgattatttc ttttatgttt
     3601 attatcattt taccattttt accctctaca ttagcaacag ctagcggagg agctaaacgc
     3661 tggatacgct taggtcctct ttctatttcc cctgtagaat tttttaagat aggacttatt
     3721 tattttttag catggagcta tacaaggcgt attgatgata gcaaaaaagc aatcagacac
     3781 gaggctttaa ttcttctacc ttattgtatt ttagcttcta tagttatagg atatatttat
     3841 atcacccaaa atgacttagg acaaagtgta atttctttct ttttgattct agctttagct
     3901 ttttttgcag gagctagtaa aagacttttt gcttttggaa ttttaatcat catgatgata
     3961 ggcataatgg taatttttag taaccaaaga agaattcaaa gaatctcttc ttggtgggga
     4021 aatatacaag atgctttttt acctatgctt cctgattggt tagcaaacac tttaagagta
     4081 agcagcaaca gcgaacctta tcaaatttca cactcattaa atgctatagc tcatggagga
     4141 atgtttggtg aaggcctagg acttggaact tttaaattag gttttttaag tgaagtgcat
     4201 actgactttg ttctttcagg aattaccgag gaaataggac ttttaggtct tggagttatt
     4261 tgctatattt atctttggat gattttaaga atttttagaa ttgcaggaag atgcgaagct
     4321 aaacaagatt ttattttttg ttcaggtata gccttgcttt tgcttttttc cttttttatg
     4381 aatgcttttg gcattatttc tcttacccca ctaaaaggtg tagctgtccc acttttaagc
     4441 tatggaggaa gttcaatgtg ggcaatttgt ataggcatag ggtatgtatt aatgatctca
     4501 aaaaaggtta aattatgaca atagctttaa caggtggtgg aactggtgga catctagcca
     4561 tagtacgttg cttactagaa agtgcaatta aaaaaaatat aggatgcgtg tatataggca
     4621 gtcaaaatgg tcaagataaa gcttggtttg aaaacgaaat acgttttaaa gcaaaatttt
     4681 ttttaagctc aaaaggagtg gttaatcaaa aaaaatttgg caaaataagc tcttttctcc
     4741 ataccttaaa actctctaaa gattgtaaag aaatttttaa aaaatatcaa atcgaagccg
     4801 tttttagcgt aggtggatat agcgcagctc ctgcatcttt tgcggcttta ttttcgcgat
     4861 tgcctctttt tatacatgaa caaaattcaa aaagcggctc cttaaatata cttttaaaac
     4921 cttttgctac aaaatttttt agcgcctttg aagaagaatt tagcccttat cctgtagcga
     4981 atattttttt tgataatgca agaattcgca aagaattaaa aaatattatt tttctaggcg
     5041 gttcacaagg agctaaattt ataaatgagt tagctttaaa tctagcacca aaacttcaag
     5101 aacaaggtat taaaatcatt catcaatgtg ggaaaaatga ttttgaaaaa tgtaaaaaac
     5161 actatcaaaa tttaaatatc caagctgatg tttttgactt tagttcaaat ttagaagaaa
     5221 aaatgaaaaa tgcagatcta gccatatcaa gagcgggtgc aagcactctt tttgaacttt
     5281 gtgccaatac cttgcctgct attttcatac cttatcccta tgcgattaaa aaccatcaat
     5341 actttaatgc taaattttta caagatcaag ctttgtgtca aatttttaca caggatacta
     5401 tcaagcttga tgaattctta aaagcaatgt taaaacttaa cctagaagat atttccacaa
     5461 gattacaaaa cgtaatacaa aaaaatggtg gagatatatt aattcaaaaa gccttatttg
     5521 atgatttgac ttttgtaaga taaatatcca aagacattaa ctaaaattcc aacaaaaatt
     5581 aacatcaaaa tagcaagtga aaaattttca aatttatcat gcaaaaagcc tatgatccat
     5641 tgtccttgtg ctgcgattaa atacccaaac ccttgagcta aagcagaaag ttttgctgct
     5701 acttgagtat tagaactttt ttgtgcgata aaaagcagtg caataccaaa aaccccaccc
     5761 cacggaaaac ccataataaa agcactgata ataatagaaa ttttactatc aaagataaaa
     5821 agcataacaa aagcaatcac atacatacca cataaacttg ctatataaaa agtatgtaaa
     5881 ttttgcctca gttttcctaa aagtaaagga ccaaaaagag atattggaac tgcaacaatc
     5941 tgggcaaata aaatcatatt tgtagcaaat tctttatcaa aacctttttc tacaacaatt
     6001 tgaacatacc aaaaaaataa agaataagct aaaaaacttt gaaatcccat aaaaagagtg
     6061 attttccaag ttgttaaatt tgcaaaaaga ttgatttttt tagaactttt attcctacta
     6121 cgaaaaaatc taccattttt agcttgagga taataaacca ctaaagctat aaaagaaaaa
     6181 atcgcccaaa aaaccatagc acccgctaaa tcaaacacac taaacaaagg tatagctaaa
     6241 gcaatgccca taatcgaaga aatacttaaa gtaaggctat aaattcccat tacacttgcc
     6301 attttttttg gaaatttttc tttaacaaaa ctaggaagta aaacattagc aattgctata
     6361 ccacaaccta ttgctaacat tcctaaaaat aaaccatata cgccaaaata agaacgaata
     6421 atttcaccta aaaaaatcaa aaaaattcca aaaataatag cacggatagg ggaaaaataa
     6481 cctacaacaa aagaaatact tccaaaagct attaaaggaa ggcttgtaag tatacccgct
     6541 acagttgaat ttaaataata cttatcttta ataatgtcaa ttataggccc cactgcagta
     6601 attggggctc taagattaaa agctacaata ataacaatag cagcattaat ccaaaatatc
     6661 tttttaaaag aagccataaa agccttattt ttgaatttct acttaaatat tttaccttct
     6721 gccatcttag gaatccataa aatattacct tcaataaaca tatctgtagg acctttcatg
     6781 aaagcaaact caagttttac agctttgcta ttctctaaat tacaaataag cctatttacc
     6841 ctaagaactt taccaataaa ccatctttat aagaaactat cccatcataa gattcttttt
     6901 cgtttttgat tatatcaaat tctttctttt tcaaatcata actcaacaca acaccaccgt
     6961 ttacaccatc aagatgataa ccagctataa aaagtttatg tttttttctg tctagataca
     7021 actcatttaa accacccaat tttgctaaat caagttttaa aagttcagaa tattgttttg
     7081 tctttaagtt aacttgtaaa ataagtcctg taccagtatc actgattaac aatgtattat
     7141 tatctaattt ttctatatca tttaaaaaaa ttacaccttt aataggtagg ttaaaatttt
     7201 ctttcttaat ttttaaatca aaaccacgta aaacatcaat atctaccaca taaagagttt
     7261 ttccaatctc caacatacct tttggtacat taaagtgagt taaaaatact ttaccatttt
     7321 tatcaaactt agaaacaaac tcatcattat ctttatcttt tgctaaagat tcaagctttt
     7381 catttacatt ggacacataa acgtaatttt tatctaacaa aatactttca ggacttttaa
     7441 aattataaaa ttcttgatat tttaattcac ttgtaccaaa taaacttcca aaaagggcca
     7501 aacttaaaac atattttttc atattttctc ctttaattta accaaatatt tgcattaatt
     7561 atatttgttt caaataaaaa agtgtgctag ttttttgata aaaaatacaa gttttttgat
     7621 ttttgatatt gcttaggagt ttgcttatat ttatctttaa atctttcaat aaaccaagct
     7681 accgaagaaa aagcacattc attagctatt tcatttatat tttttttaga aaattcaagt
     7741 aaaatctttg ctttttgcaa tcttttttca tccaaccact ttttagggct ttgtttaaaa
     7801 cattttttaa attcccttga aaaagtagca aaatcaagtt ttgcaaaatc agccatttca
     7861 cctacactta aaaattctct cccacaatac tcaaaaagtt gcgaaagatc taaacgaaat
     7921 tcttttaaaa ttccagctaa aaagcttata aaatgagtgt ttttatttaa aagcaaatgc
     7981 aaaaaaattt cttcaaattt aagacttact ataggatcta atatctgcgt attttcatca
     8041 aaatgcggag caaaactctc taaaattcct tgtaaaattt tatcattttt aacccaaaaa
     8101 atttcgcttt cttgactctc ttggtctaat ttaaaaaaat ctttatattt ataaataagc
     8161 tcaatcaaaa aagcattatc aaagaaaaac aaataagctt cataaatccc attactaagt
     8221 cctacattac ttaaggtata atttcccgct tttaaaaata aagcttcata agaatctatt
     8281 ttatagtcct ttgatgcagt atgtaaaatt ttatatcctt ttctaacaaa agttaaaaga
     8341 tgactaccta cattgacaaa agaagaatgc gaggcgtttg tttgtgtata ttttgcaaaa
     8401 gtgcatgatt tagaattttt ataatctata ccttttaatc gttttaaatc ttgtggcaaa
     8461 gaaagaattt gttccatttt tatccttata tttaatacaa ctttctttta cattccataa
     8521 gatatttttt agtatctttt tcttgcatta aaatttcacg catgcaaacc ccagctatat
     8581 ttaagccttt aaaactagcg atattttgat catttatccc acctatagca taaagaggaa
     8641 tttgactaaa tcgaagtaag gattttaaaa aatcaagtcc cttaggttct aaatccgctt
     8701 tacaagaact ttgaaaaata tgtcctacaa aagcataatt gaccctataa ctcatcgcct
     8761 ctaaaagctc ttccttacta tgtacagaag tgccaaacac atgaaaatat tttgttaatc
     8821 tagactcttt tcttaataaa gcaagtggag cgtgaaaata acgatgccct aattttaaac
     8881 aagtcttatc aaaagaatgt aaaaaacaag ttgttttttg cttcgcacaa atgcctaaaa
     8941 cttcttttgc taagtcataa tactcaaatt cactcaaatc tttttctctt aaaactatag
     9001 catctacttt agacttagca agtttttcaa tctgctttaa aaagtctatt tctacgcatt
     9061 ttctatcgct tatggcgatg atttttttat cccacataga tgctatcact catcacagct
     9121 tgcaaatttg atcttttaag cataattaaa atttcatcca cgcttctatc gtctgaaatt
     9181 tcaaattgct catcaccttt tttctcaccc ttatgttcgc ctatgcctac acttacccct
     9241 gcactcattt ttgtagcacc aagtttgata acctcatctc taaaacctac tctttcacgg
     9301 cttgatatag taatgcctgc aaaaggtaaa aagagtctat aagcacaaag cacttgtaaa
     9361 aggcgttttt cactcacatc tttaggatgg attttagcgt tattgataat aggtcttaaa
     9421 cgcggcactg aaatagaaat ttcagcgtgc ggataagctt gttgtaaaaa atgtgcgtga
     9481 agtgctgtag caagcgcgtc ttttctaaaa tcatctatac ctaaaagcgc cccaaatgcc
     9541 actccacgca tacccgcttt taaagctctt tcttgagcat taaagcgata aggaaaaatg
     9601 cgtttttcgc cacctaaatg aattttagaa tattttaaag gattataagt ttcttgaaaa
     9661 actgttacat aatcacagcc attttcatgc aagattttat attcttcttc attcatagga
     9721 taaatttcaa cacccacaac cttaaaatac tctctagcta tcttacaagc atttgcgata
     9781 tattctacac ttgcaaactc tctgccctca cctgttaaca ttaaaatttc ttctaaacca
     9841 cttttagcaa tggcttgcat ttcttcatga atttcagctt cactaagttt ggctcttgtg
     9901 attttatttc ctttttgaaa accacaataa acgcatttgg aattacaata atttgacaaa
     9961 taaagcggag taaaaataga gatagaattt ccaaaatatt tttgtttgct tttggcggat
    10021 ttaaaagcta attcttctat aaaatcttct gttgcacttg aaagcaaggc ttttaaattt
    10081 tctatactta aatgcgtttg atttaaggcc tctttcactt ctttagcact aaattgactc
    10141 tcatcatagt tttgaacttc atctaaaact ttacttaaaa tttcgctttt tatttcctgc
    10201 atgtgaggta aatactgcat ataatcttgc atgattaatc tcttaaaaag cctgttagtg
    10261 gagaactaac cttagcttcg ctcacacttg ctaaacctgc taaaaaagcc gctcttcctg
    10321 catttactgc caaagaaaaa gctttagcca ttaagactat atctttagct tcagctatgg
    10381 ctgtatttac catcactgca ctcactccca tttgcatagc ttcgcaagct tgtgcaggac
    10441 ttccaatgcc cgcatctaca atgataggca aatcaatttc attaagcaaa atttgtataa
    10501 attccttagc acaaagaccc ttattactcc caatgggtgc tgctaaaggc atgatagctg
    10561 cagctccagc atcacgcata gctctagctg cgtaaagatc agcatgcatg taaggtaggg
    10621 gtgtaaaacc ctctttagct aaaagctcac aagctttaat cgtttcataa ttatcaggca
    10681 ataaatatct actatcgctt atcacttcta tcttgataag ttctccacaa ccaagttctc
    10741 ttgaaagcct tgcaatgcgt aaagcttcat cggcgtttct tgcacctgaa gtgttgggta
    10801 aaagtgtgat atttttaggg atataatcaa gtatatttgc gatttcgccc gtatttgcac
    10861 ggcgtaaggc tagagtgatg atctgtgctt ttgcctcttc tatagctgat tttataagct
    10921 ctagcgaata ttttccagaa cctaaaataa atcttgaatc aaactcgtat ttacctattt
    10981 ttaatttatc gttttttaaa ttttcttgca tttttactcc ttatttgcta aaagctctaa
    11041 aacaagattg ctttgatgtc ctgcacaaat atttaccctt ggtgccataa gtccatttcc
    11101 tagcttagca ccatttacca aatccccaca cacatagaaa tttttagcaa tttttcttgt
    11161 ttgtatgctg ttgctatcac catagcccgc aagccctgaa gcacagatta aaatactatc
    11221 tttgtaaaat ctatgaaaat tttgcgccat catagctttt gcaatagcac catcaaaagc
    11281 ttcacaaact atatctatac ctttaaacaa agactttaaa ttatcctcat cgatttttaa
    11341 agtgcaaatt tcaacgctga tataaggatt aatttcgcta atttgatctt ttaaagcttc
    11401 ggttttaaat ttacccaaat cactcacacg gtaagcttga cgattcaaat tactaggctc
    11461 aatcacatca aaatcaatca attttaaata ccccacgcca cttcttgcta aattgatagc
    11521 gatatgcgat ccaagtccgc ctaaaccaca caccgccacg cttgcttttt taagtttatc
    11581 atgaagtttc ggcgtatggc gtgctctcat catagcatct aacgcatctt ttggaggtaa
    11641 ggaatttctt tctatgcaaa aaagctcatc attttcattt aaagctatat tttcttttgt
    11701 tgcaaaacca ttgatgatcc aaacatcatt ttcatttttg ctgatatttt taaaaaattc
    11761 caaacttgtt ttaaaggctg tatcaagctc tttaccatta aattttactt tcattatcca
    11821 cctcctacaa aatttacgat ttcggcttta tcgttttctt ttaaaatcaa attttcaaat
    11881 tcactcttag gtataatctc tccatttaat tccaaggcga taagttcgat tttaaaacct
    11941 ttttcttgga taaaatccat aaatctaagc tctttaaatt caaatttttc tccgttgata
    12001 atcatacttt tccttgtatt tgctcttcta ctttaatttt tgcattatct aataattgtt
    12061 tagatttttt ccttaaatca aagctttctt gtatatattt tgcaattttt tcttgggttt
    12121 taatatcaag tatcgccact aaaacctttt taatatcttc aatcctccaa tgagatatga
    12181 tagatccgcc acaatctctt tgtgcttgta gctttacaaa aatagaattt aaaaacaatg
    12241 ttagatactc aggtaaaata ttttctttat cttttatatt taaatgcaaa atagcaccac
    12301 tagttataac ttccttgtct tcttttacac aatacgcaac accaatactc ccatctttac
    12361 taaataaaat agtatctttt ttcggatata aaatttgtaa atattgcgga aaaaaatctt
    12421 tttcatctaa aaaaacatca gcttcactta acccatattg tgtcaaattt gcaactctta
    12481 taaaaggtat tcctttattt ttatataaat tcgaacccgg ctctattgac tttgtgatac
    12541 ttaccaaatt atctaataca gtatatttct tattcattat aattttctca tttatttcat
    12601 atttcttttg ataatactca ctatccaatc ttcctgtttt tagaaaagat tcttttagag
    12661 tgcgtataga gatattgagt gattttgtag aatgatctat tttagaatct agcaaacttt
    12721 gcaatggatt ctttggatca agccctaact caaggtatag agtttcctct gcttttttat
    12781 ataactcctt actttcttct aatgctttgt gagaatcttt taccaaattt tgaatttcta
    12841 gctgaaattc tataggaaga atgggaattt taaaataatt aaaatctcta ggataaattt
    12901 caatttgccc ggaagttcca ctataatatc tgattatttg aatctgacca taataacttt
    12961 gcagaaaaat agtcaaaaaa taagggttta aatatgtttt atttttaaca acaataacat
    13021 taatatgact atctatacta aaatcaaaat caagtatatt gataaacact ctacctaaag
    13081 ttcctacacc tgttgcattt atcaatacag attcttttgg aacaattttt ccatacccac
    13141 tttttgcatt ttcatagtca atatattcat tcctaatata ttgactattg ataactttca
    13201 tcttgcttgt ctcgtcatat ttcggttgcg aataccgaga attaaatttc atattatcgc
    13261 ccaaatattc aacttgattt aattgtatag tctccatagc atcaaaatat tctttcttga
    13321 aaaactcaga atctattctt ttactctcat tatccttttg agcttcacta agctttaata
    13381 cgctaatttc taaatacggg tatttttcct gcaaagtttg gtttagattc attttattcc
    13441 tttttttatt tcaatctaag taaaaaatat ttataattat aaagctcaat taccggtggt
    13501 agaaagagat ggctagcttt atgcttcttg cagatgccta aatctgcacc aaacccctaa
    13561 aaccattcgc aattctttag ctctatatca tttccgttta tataatttct atatcttttt
    13621 tcataagtat ttttattata tcctttatct atgtagaaac ttgtcactaa aaatgaacta
    13681 cttctgccta gcttttgcaa aataactata aagttatagt tatgtaacca caaataaaaa
    13741 cggattgccc gtttctcttt ataataaaaa gctttaattt cgggatgagt atgattgaga
    13801 ataatttgtt tgatccaatt tattctgcaa gctctttggc tatcaaactc ccttgtttta
    13861 ttttgtttgt tttctcgtgt tgtgatatgc caaaatatct tttctttcac cttatgcttc
    13921 ttatgtgatt gcggatctat ataaatacaa cctgctaaat acaatggagc ctcaataaag
    13981 tcttgtttga aaattttata agctaagtca aatttttcat tttcacattt acaagtgcta
    14041 aaatccaaga ggtgatacat tattgttcac ctttactcaa ttgaatccta aaaatattaa
    14101 atttattttc ccaaggtggc gttcctttat ctaattcaat attagctatg ttttcaattt
    14161 tatctacaat gtaatttttt atttcacttg tgtgttctat atcatccctt gctttgtatg
    14221 aaatagcacc tatgagcaaa tcaacaagtt gaacaatatt tgattcatgt gattgaattg
    14281 taaaaatttt catatcaatt gattttttaa atttattatg taatacattt cctagttctt
    14341 ttatcttgtt tccacttcta gtatctttat aatcaagata aatttttata cttgtatcaa
    14401 tctctatcag gttgcgcaat acttggtaat acattttata ataaaacaaa tcatggcttc
    14461 cttgattata cacatcgtgt cgcaagtttt ttttatcagg aattaatatg gcttgaaacc
    14521 acatatgcac agaagaaaag aaaaactcta gcaattcgtc atagaaatat ttttggctta
    14581 tattaagttt tgtccattta atttctttat tatatttata tttatgcttt aaatatttaa
    14641 ttgttttatt aattttaata atttcagatg acggaacttt aagcgctcct aataccataa
    14701 cctttgaaca caaagttaga ttatctttgt aggataaatg attgctttca tcgcaaaaaa
    14761 ttttaaattc tttcatgtta tccattcgct tattctttcc aaaaactcaa attttgtgct
    14821 tttgcaaatt caataaaagc ttcagctatg ccatcttttt gcaagtcttt atatttttct
    14881 acatttaatc tatattcttg tattcttttg tcaaactctt cttggctttc atctttttgt
    14941 tttataggct catctccttc taaatgcgga tgaaataaat catgttttac tactaaatga
    15001 tcatgagaat ctaaaagtgg gtaataaatc ttttcgcctg aattatcttt gctaggctca
    15061 ctcatagtag caaagaagat attatagtcc tcacactttg gacataattt atcatcccat
    15121 ttttgtaaaa ataaaacact tgtttttgtc ccagtgtgtg gtttaaagac atttccatga
    15181 agtcctacaa ccgctaagat tctagctttt tgtgcgataa attctcttat atatttatcg
    15241 cttgaattat taaaacgccc ttgtggtaat acaatagcca ttctaccacc aggctttaac
    15301 atatctaaat ttcgttcgat aaataaaata tctcttccta ccttgctttg aggtttgcca
    15361 ttttcctttt tacccaactc atatctagct aaaattctac tctcttttat atctcctgca
    15421 aaaggtggat ttgccattaa aacatcaaaa ttaaaatccc tattttgatt tttagttact
    15481 cttaaatttt ttaagcgttt aaaaccttca aaatacacat cttgccaatc ttcatcatct
    15541 tttacccatt catcccatct atcaaagtca atggaattta aatacaaaac atttgtatgc
    15601 ccatcacctg cgattagatt aagcattttt gatacgcgca cactcttttc atcaaaatct
    15661 ataccaaaca ctttttcttt tacataatct tgacactcag aaatcttttc ttgggctgta
    15721 aagagatgac ttgcttctat gcctctttct ttataaattg aacgccacac ataaaaacaa
    15781 gtatgtatcg gaaatccaca acttccactt gcagtatcta ttatactttc atcttttttg
    15841 ggatttagca tttttacaca catatctatt acataacgcg gagtaaaata ttgccctttt
    15901 tcaccttttg aggatttatt cactagatat tcaaaagcat catcaattac ttctaaattt
    15961 gagttaaata actttacatt ttgcaatgat gatacacata cacttaggtg cgaaggagaa
    16021 agtttaattt tctcatcatt attaaataca ccttcccatt ttttctttgc tttatcaaag
    16081 agtttttcta ttttttgctt aagttcagaa tcagactctc cataatttct aaactctaag
    16141 ctctttgttc tatctcttgc accctctagc tcatcaaaaa gttttataaa tataagctta
    16201 aaacattctt caaatacatc aactccagca tttgccaaca cctcatcttc catttctgta
    16261 actaaattct ttaaacttcg cttttgactt tttaaaatat cttctttaat caaatcatca
    16321 aaggtaaatt ttactttcaa cagatctggt aatgtctggt ttgatgcagg aatatttgga
    16381 atagattcaa aataatttgg atcttttcta tgataatagc taatttcttt accattgcac
    16441 cacacagcca tagttgcacc tgtagcatta caataacttt ttaattgttc tttaccatct
    16501 ttcaactttg gcttttttac ttctataatg atgtatgggg ttgtgatttg gattttatcc
    16561 attatcacaa tatcagctct ttttacttcg cgtccaaaat gcacaccaaa ttcaattttt
    16621 atcatatctt taggatagtt atactcattt aaaagcttat cgatataaag ctgacgcaca
    16681 atttcttctg gcgtgagttt aatttcttta tcgcggataa ggcaactagc atagtatata
    16741 atttggttat ttttgtttgt tttagctata attttagttt ccaattcagc aatagctttt
    16801 ttactaaata gatctagctt gtaatcacta tcttttaaaa tttcctcaat cattctaaac
    16861 ctttaaaaat tttctatcaa gtctttaaaa acaaggcaaa gtttttcaaa ttcttctata
    16921 cttacccttt catcaatggc gtgaattcta tcattacaaa ccccaaattc cactaccttt
    16981 acaccgtatt ttgcaaaata ccttgcatca cttgtgccgc ctttagtatt aaactctggt
    17041 acttcatgag tgatcttttg cacgctttca ttcatttttt gaacgatttt gttatcaata
    17101 tttgtcaaaa aagcttcact tgattgtttt aattctagtt catagtttaa accatggcaa
    17161 attttttcca catagctttt tacatcttct aagcttgtat caggagaatt gcgcacatta
    17221 aacataagtt ttaaatcatt tggcgtaaca ttacacactc ccatacctcc acgaatgtcg
    17281 gttataacga tttttgaagg gctaaactcc gcacttccag gatcaagatc aaaacccgct
    17341 aaaagcttta aaaccggtgc aaaatcatgc acgggattga tacatttttc aggataagct
    17401 acatgtcctt gtttcccacg gattaaaagt tttccattga tagaaccacg acgccctatt
    17461 ttgatactat caccgatttt tttcatacag gttggctctg caactacagc ataatcaggc
    17521 agcatatttc tttcttgcat ccattctaaa acagccttag ttccatatat agcctcgcct
    17581 tcttcatcgc ttgttaaaat aagactaagc cttgctcctt taaaatccgc attctttacc
    17641 gcatctacaa aggctgctac tccacttttc atatcttgag caccccttgc atagataaag
    17701 ccttcctttt ccacaggcac gaaagcatca ctgctccaac cctcacctgc aggcaccaca
    17761 tctacatgtc cgccaaaagc taaatgttca ccttcatctt taaatttctt ggtaagtaag
    17821 agatttttaa cgcctttttc ttctataaaa aaaacttcaa aatcgctaag ttccatagcg
    17881 atgaaattca aagctccatc atcatttggc gtaacggatt taaattttaa aagttcgatt
    17941 aaaaattctt ttgcattcat tttttatcct aagaaagttt tatacaataa attaagagca
    18001 aaacactcta taactataac tgaaactata ttgattataa aaacaacttt tgcactaaaa
    18061 acatggctat atcttgccac tacaaaggct aaagcaccca cccaagaaag aatagccata
    18121 ataagtccca aagtcatcaa ataagcatga tcactactta aaaccacact cgcaatacta
    18181 agccaaaatc ctatcacaaa aggattcgaa ccatttaaaa aagctccttt aatatagctt
    18241 ttaaaaagac tttcttcaat ttctttatgt tctacactta agctttcttt ttttcttagc
    18301 attaaatacg ccatataagt taaaaaacaa aaactaaaaa tcgccaaaga acacataaaa
    18361 atgacattat ttaaaaaatt taaaagccca aattgaagca agcaaagata gagcatatcc
    18421 acactaaaag ccccaaaacc cactgcaata gaatttttaa aggcctttaa agcataagtt
    18481 aaaatcacaa tattcacagg accaaaaggc acactcaccc caaaacctaa aaatactcca
    18541 cttaaaaaag aatcaaacat taccatcttt cataaaattt tctatatcaa gtgcaatttt
    18601 atcaatacta ctaagtatat cttctatgta aattttatca aaatatcgtt ccaattttgc
    18661 atctttttca tagatattta aaatactttt ttcacacatt gatgcataat gccccacggg
    18721 taaaaccgct ccacttgtac ctatgcttat aaaaagtgaa gtttgaccca gcaaagaata
    18781 aagtgtagta taagcaggag cttgctcttc aaacattact atattgtgcc ttaaattttg
    18841 gcttttacat ttaggacaaa ttttattttc tattttttca tagccaatat taaaaatttc
    18901 ttcacatttt aagcaacgaa gttcaggtaa aaaaccatgc aaatgcacca catctttaca
    18961 acctgcacgc tctagtaaat catcgacatt ttgtgttaaa acaaaaagat ttttacccca
    19021 tttttctttt aatttagcaa tttgcttatg agcgtgattt ggctttacat ttgcaagttc
    19081 taagcgtctt gcatcataaa aatccaaaac ttttttagga ttttttctaa agcctgtagc
    19141 agagcaaact tccattacgt cataatcttg ccaaagtccg ccattgtctc taaaagtttt
    19201 aagcccgctt ggagcagaca aacctgctcc gcttaatatc ataatgtttt tcatcgctaa
    19261 accttataaa atttacaaag tttagcgaaa aatgctttaa gaaaataaat atttatgcaa
    19321 gattttttct ttttcttttt ctaatctact aagctctatt ttatcttcat tgactttttt
    19381 ctcaatctta tcaattatat ctactatttg atcttgaaaa tctaaagaag agagtttaac
    19441 tcttaatgct cttattctat ctattgaagc tctaagtttt cttgaaaatc cttgtttttt
    19501 accagcttca tttaaaacaa aacttatgta tttagcattt atttttgtat catcaaccct
    19561 taatactcca caatgatcag ttggataaaa ctttctattt tttggcataa aacccaccat
    19621 ccaatctcca tctatacccc ataaaacaga atcactatca taatctggca agatttcttt
    19681 atcaataaat ccaaatacct ctaacacatt cgcactataa acaggaattt tcccattttc
    19741 aagtaaatca ctatttaaaa ttctttttcc aatacttaat ttaaaaattg gatttgataa
    19801 agtatactct ttaattgttt tgttaaacgc taataaaaat tcattatcta aatttatttc
    19861 acacaagtta ttaattttgc tcaaaataga atttagctca tacccccccc ccatcatcta
    19921 taataccgca tttttgaagt attgctttaa ttaagttttg atactcttgt atgctcattc
    19981 ttatggtatt atactgttct tctacctttt cacattctgc cacaatttgt ttttgaattt
    20041 caagcggcgg aagcgggatt tttaaagttg ctaaattact tcttgtgatt tgtggctgcg
    20101 ctgagcccgt aataatattt ttgatatttg acaagggtaa aatataaact aaaaatttct
    20161 ttaaaattaa attactttcc aatggcgtta ttatcattgc attacctgta atccaagata
    20221 atggttctgt gtaattaatt gttccgcaag ttgcacccct acaagtcatt gctacttcag
    20281 aatctttatg attatattta ttataaaatc ctatcacacc atttgcacca taaactttat
    20341 aattaccagt ttcttgaatt tcttttgctg taattatttt tggttgatac attttacaaa
    20401 tagattccaa cttcaccaac tcatatttac aatttacgaa aggattagac atttcatttt
    20461 gcattgaatt actaggattt aaacttatag ctttgttaaa ttccactttt tcaaaatcca
    20521 tcatatcaac aagccttgct ttactggcat agccttgcaa atcttttggt atatcgctaa
    20581 gagtttttaa gaaagatttg caaattaaag tattaagctt agtctcattt tgcggattgc
    20641 ctctttcaaa aagtgggcta agataaggtt tatgcaattc ttttaaacct tcatcgcctt
    20701 ttctattgct ccactcatag cccaaaaatt tcttttgttc ttttatatcg cttggggatt
    20761 ttataattaa gacttcttgt ttaagactta agcaaaaata aagtaattta tccttttcta
    20821 ttgcttgagc ataagctaaa aaggctttat cttctaagct tttcttatct tcactctctt
    20881 tataaatttt agattcttta agttttttat aatcgcttgt ttggttaaaa gcattgtgat
    20941 aatctttaaa ggcttctagc actgcgagat tagaatttaa gttgccgttt aaaaaattct
    21001 cataaagttc tttgtcaaat tttctaaaat cacaatatgc agctagataa ttttgagaaa
    21061 agttttcact gtcttttaaa ttttcagatt ctatacgctc aagaataaga ctataatctt
    21121 gagaaataaa attattttct tgcttaaaag tttctttttt acgtaaaaat aaaataatcg
    21181 tatttgtccc tgtcgctcca aaagtacagc ttccaagctc aacaatagca ataaaatcaa
    21241 aattttgaaa caatatttct cttgtatttt tataaataga atccttattt aaaatagaac
    21301 ttggcaagat aatagcagct tttgcattat cttttaaaat ttgatttgct ctttctatga
    21361 aaaaacattc aatagcatta tttgtttcta tgtttatatc atcattaaaa agtttataag
    21421 tgtttttaga tttattactt aaggtttcta aaaatccttt tacagaataa ggtggatttg
    21481 ctataagtaa atcaaaacta ttagattcta tttgtggttt tgctttttct ccttctagat
    21541 tgcttgtatt tgctagttca aaactagcaa gtgcatcagc atataaaata ttaatttcat
    21601 tttgcccata cattgcactt gaaaccttag aaaccttact taagcgatat tctttttcaa
    21661 taccataaat atttttataa tactctttga gttcttcttt ttttaaatat cgcttaagct
    21721 cattggcata ggtgtttaaa aaatgtccag caccacaagc ataatcaatc acttttaaag
    21781 ctttagaatt ttcgcttaac attgtttgaa gtggcaaaga atacacaata aattcacaaa
    21841 tttgtatagg cgtaaaaaac tggccttcat cttgcttcat gcctttttgc aaaaaaagtt
    21901 caaaaagatt acctaaaaat tgattggtag aattttgagt aagtttataa tttgcaaaaa
    21961 gctctactat ttcttttaat acaagtgcat tttttaagaa taattcttta ttatgcactt
    22021 ctaaaaatgc aaaatcatta tttgaataaa attttaattc tttgatgtaa ttttgcatta
    22081 cttcttttaa agtttttgtt tttagttgtt taaaatcctt ttctatatct tcattagata
    22141 caaaggtgat tttttctcct aagaattctt tcatagcttc tttataaagc cacattaatc
    22201 tatcttgcat atttgcataa gtatctgcca ttacaccaaa atatccaaat ttgagattgt
    22261 ttttattaaa agtttcatca tagattttac aaagaaaaat atttacaagt ttatcaaaag
    22321 cattttcctt gcctgatata ttatgcttac gtaaaatttt tgcaaattcg tgatatttgc
    22381 cttcttcttt aagttcttta agattatcaa aagttggagt aatttctaaa attttataag
    22441 cattgacatt tgcttcaaaa atgccttgtt taaaatattg cagttcataa ctttctttcc
    22501 aagttttaaa aagttctata ttgttattag attttttata agaattttgt aattcttttt
    22561 cttttagata ttcttcattg tcaaaagctt gtatgatgta atttttatat tctaacttat
    22621 cgctaaaatc acttgtataa agacaaaggt attttacacc tttttcttgc tgaaaataag
    22681 aaaaaagctg cccgccatct tcttgcattc tattccattc ttttataaac tcgctatttt
    22741 tagaatctgt agttttgcat tcaatgatta aataaggatt gttttcatta tcctttacta
    22801 aaatatcagc tttggcacct tttttatccc tgccaagatt ccattttggt tctaactcta
    22861 aatgttcagc cttataacct ttttctaaaa gtctatgcac gcattcaaaa actacaaaat
    22921 tttcagggtg tgaaaaatta gaagtagttt tatcgtgtat tgtaatttct tttggataat
    22981 taatgctttg atttttgtag tctatttcaa gcgtataatt gctaattttt ttcacataat
    23041 tttcattttt atttttaaac tctaaacttt ctaaaacatt ttttaaatta tcttttgtaa
    23101 tcatttatac cctcataatt ttaccacctt agcaccaaaa ccaccttgat tgataggtgc
    23161 atcactaaaa ctttttacac ttttgtgagt ttttaaaaac tctcttacag caaaggcaag
    23221 ctttcctgtt cctataccat gatagattaa aacctcatca aatccagcta ttaacgcatc
    23281 agagataaat ttatcaagcc ttaaaatagc ttcatcactc ctaagtccgt gcaaatccaa
    23341 actcacacta agattagtag gttttactac attaatgctt gtttttgaac ttattttagg
    23401 tgtagagctg ctttttttaa gcaattttaa aggcacacga agtttgatcc catcgctttc
    23461 taccatagcg tcgtttttag aaatgcctat aattttacct ttaattttct catattttac
    23521 aaagtcaccc acacgcaatt cttcattttg ttccatactt ggaaagataa tttctttttt
    23581 aagctcattg gctttattaa gacttctttg cttgtctttt gtatctttaa gttgtatggt
    23641 ttttttagct tcttctatgg ctttgtgaaa tttaaattcc aaattcctta aactcatgcg
    23701 aaattcttgt tcattttttt ctttttgatc ttttaaagaa agtaaaattt catcaacttt
    23761 ttgctctttt ttctcgacat tttgaagttt agccttaagt tctaattcaa gattgatatt
    23821 tttacccaca agctcttcta aattttcttt atcctcgcca taaagttttt tagcctcacc
    23881 aactaaatta ggcgggattt gataacgtaa agccgtttca aaggcataag attttcctat
    23941 ggtgcctttt aaaaactcgt attttgggcg tgaaagctct tcatcataca aagcagcaat
    24001 gagctcaact tgctcgtttt ttgccaaaag catggcaaga cgtttatgat gtgtggtgat
    24061 aatgatttta agattattag ctatgagttt taaaatcaaa acactataca aacaagccgc
    24121 ttcttcaaaa tccgttccaa gctctatttc atcgatacct aaaagcaaat ttttcttaga
    24181 aaaaagctta gaaaaatgca acattcttcc tgcaaaagtt gaaatgtcgt ttttgacatt
    24241 ttgcggatct tctataatgg catcaaattc tttaaaagtg ccgattttac tttcacttgc
    24301 ctttatatac ataggcaaaa gatgtttagc taaaaatgct gcgcttagta tggattttaa
    24361 aagcatggat tttccacctg cattaacccc tgtgatgatt aaaacttgtt ttttaaattc
    24421 caaactcaca ctttttggat tttttaaggc aggatgagcg aaatttttaa gcaccaaatc
    24481 cgtactttga tcgcacaaaa caaattcaaa atcccttttt ttagcaagca aaactctagc
    24541 actataatga tcaaaaagat caaaggctgt attgataaat tttaaaaaag gcaaattttt
    24601 tgccaaaaaa gccgaaaaat ttttggcgta ttcatagtaa atttcttctt tttgattttt
    24661 gattttttct atatcatttt gtagattttc aacacttaaa ggcacaatat aaaagccgcc
    24721 actactgctt ctacctatga tttttgcttt aatagcgtga ttaaacccgc ctcttacaag
    24781 caaggcttca agattattta taagatggat ttgcgtatca ataagataag gcgttaaagc
    24841 ctttgcgtaa caaaatttct taaactcggc tataatactt tcatttttta accttaaagc
    24901 ggtgttaaga ttcacaagtc tttcgtctaa gctttctttt aattcaccct tttcatcaaa
    24961 atttaaacaa agctccaaag ctccactaac aaattctatc ttttgcaacc aagagtccaa
    25021 atttgtccct aattttaact tttttagctt ttcaaaataa cgaagaattt ttacaaattc
    25081 aaaaatttca tctaaatgta aaattccttg tttatttaaa tgcactaagg ctttatcaag
    25141 attgctaagc tctggcatac taggaaattc cacctcgcaa agctcgtgta tgcgtttaaa
    25201 atgaagttta gaatctcctt gtaaaaaaat ctccttatct cttgcaaaaa aagtcttaaa
    25261 ttcttctaaa taactattta aatcaagctt tgagttcaat tcttcttttg tgtcattcat
    25321 catttaacct acaatcttta atatctataa ttaaagaatt aaaactttga ttattgtcct
    25381 ttgaaataaa acttcccgta ccaaattcat agttaaaata cgccctagat acattaatat
    25441 ctttacataa aatatttttg ttttggttaa aagcaacgat aatatctatt cttaaatgac
    25501 ttttttgcgt attctcaaac tcaaaaaata ctgccaaaac aacaaaaatc acaagtaaaa
    25561 taccaaaaaa aggcttggtc tttttgccta attttttacg caaagcaaaa gtgatcaaag
    25621 ctaaaattaa gatgattaaa agatacagta aaattctact cattcttttg ccttaattta
    25681 ttgctgatat ctcccgcacc aaaacctata atgagccctt cttcaaaaac ttgcccctta
    25741 gaagccacta aaaatttacc ctctctttta atgtcttcta caaataaagc cttaggaaaa
    25801 acggccttta aatcaagatc tataggctct tcacctgcag cataaacagg taaaattaca
    25861 agttcatcaa caccttcaaa agtctttgca aattccccta aatttgcagc caaacgcgta
    25921 tagcggtgtg gttcaaaaat agctgtgatt ttcttatatc cacctaatct tgcatattct
    25981 tgtgccgcac ttaaagttgc tttaatttca gttggatgat ggccataatc atcgattaaa
    26041 accaaatttt catccgcata taaaatatca aaacgctttt taatgccttg atagttttta
    26101 agtctagttc ttatcgtttc tatatctaaa aaatttaaag ccgccaaaat cgataaagac
    26161 gcatcgagtg ctaaatgata ccccatacca aaaactctaa attctcccca atcttttagc
    26221 tcaaaacttg taaaaggctt aaaattttct ataaacatgg tgcagttttt gatatctttg
    26281 cttggataaa gcttaatcac ttcattttga taacttttca aaaactcatc ttcagcatta
    26341 atcacacgaa ttttagctgt atttaaaaac tctgtataag catgatgaag ttttgaaact
    26401 tcattaccat aatgatctaa atgctccgct tctgcattag taactatagc taaataagga
    26461 tttgaattta aaaaagagct atcactctca tcggcttcaa aaacaaggtt ttggctttct
    26521 ttataaatca tatttgaacc aaattctttt aaaatcgctc cgataatcac agaagcatca
    26581 tcaatcaaag aagctaaaat gcttgaagtc gtactttttc cgtgcgctcc tgctactgca
    26641 aaaacgcgtt tatcttctaa gataagcggt aaagcttcct tgcgtgaaag acatttaatg
    26701 cctaattctt tggcgtgttt aaattcggga ttttcttctt tgatcacagc agaataaacc
    26761 accaaatcct tgcctaaaat attgtcttta tggtgtggaa tttctacttt tacaccttct
    26821 ttttctaatt ctttggtaat tttgctttct ttaagatcac ttccgctaat cttaaagcct
    26881 ttttctttta aaaatcttgc caaagcagaa attcctatac cgcctatacc gataaaatgg
    26941 atattttgca tcatttaaac ctttataatt taaaggctaa attttagcac ttttttacta
    27001 aaaagaaaat ataaactcta atttactagt cccaaacgct tagctaattg atatagattt
    27061 agttccttat aaaatttagt aaaattctta tggtattcat caagctcaaa aacatgattt
    27121 gtatctttta aggtatgatt gttttcaaaa taatatccat tagcaccgct atatactcca
    27181 tttttatcta tccatacagc atcattgatc ccaaattcta atttttcatc acttggtttt
    27241 gctaacatat ttcttccacc tacacttaaa tacttaacat tgcttaagct taaagcataa
    27301 agtgttggaa aaatatcttt atgtgatcct acgcgatctt tatcgtagta aatactattt
    27361 tgcaaatcct taggaatata aagataaaaa ggcacgctat aagcaaaagc tttttgtgaa
    27421 tttaaatcta tactcatttc acgcactcta tgatctccag ttgctgctat aataacacta
    27481 tccttaaatg tactttgctt tactttatct aaaaattttc caaattcatt atttgcataa
    27541 gtataagctt tgataatatt ttcttgcttg tttttgtcgt aaggcaagct atcaagtaaa
    27601 gcttgtggaa tgttttctaa ttttggcaaa tcattttgcg gaattttata aggtggatga
    27661 ttagaaatag taagagcaat tataagagta ttatgcggat ttttttgaag taaatcataa
    27721 acttttttgt ataaaaattc atcagctact ccataagtat ttttactcaa aaaagcacca
    27781 ttatactcat cagtaagagt gttttcatct atgattttat caacgtcttg gccataaaga
    27841 taatttgcaa gatttttcca agctccattt ccgctagtaa caaaataaat cttatatcct
    27901 gcttttttat atatttgcaa aggggttaaa tcaagcttga tattttgata cttactcata
    27961 gaaagttcgg caatagggct aataaaaaat aaattggaaa aactaggtat ggtattatta
    28021 ctagaagata aaaatcgcgt aaaaacaaaa tcttgatcaa gatgtttttt taacgcccct
    28081 aaaaaattat gctcactatt tgcaaatgag cccaaattca aaccaaaact ttccattaaa
    28141 atcaaagcca cactaggttt aatttcttgt gcgcttttat tttcaacact caccctatta
    28201 aaatcaaaaa gttcatgctt taaagtttca tatttttgct cactgataat atctaaatgg
    28261 gatatatctt gctgattttt gtaattttca aaagcccatt tcatagccat caaaggatta
    28321 actgcgatat gattgataac aggaatttct gaaatggcat aattgttatt attcataatc
    28381 acacgcctaa aaggccctct taaggcgatt gtataaataa tcaataataa aaccatcaat
    28441 gataataatt gtattttatt taatttaatt gtttttagct ttaaatttaa aatttttata
    28501 ttaataaaaa cacttaacaa taacacaaag aaggcaattg ctaaaatttt aaaaacagga
    28561 taatcctgca taataatatt taaaataccc tgtgtattat cattttccaa accaaaaata
    28621 aaaatatcaa ttttagtttt ataaatttca taataataat atttaataaa agaaaagatg
    28681 acgcataata aggatattat agctatataa atacttgaaa aaactatata aaacttgcgt
    28741 cctatgtcaa ttaatttttt gttttctata ttggaaaaaa ctaaacttaa aaaaccgcaa
    28801 agcaagagcg gtaaaaatgc tgcacttaaa aatctaacat catgaaaggc gcctaaaaga
    28861 tacatcaaaa taatttcatt attttcagca gttacccccc cccttcacaa taaaatcatt
    28921 ttgcattaaa atacgattga tgctaaaaat tgctataaac aatgcactaa aaataaaaat
    28981 ttgaagtaaa acttttctca taatttaacc tttctatctt cttttaaata tttctaagaa
    29041 ttttatcaaa accccaaagt tttcttgctt tatcactttt tttaggctct atgataagca
    29101 tttcttcttc aaagcctagt ttgctttcta tttcaccaaa agcattgata aacatagtat
    29161 caccataaaa attccactca tcttttgttt tacctatacg atttactctt aaaatgcttg
    29221 tagaatttaa aaaggctctt gtttttaaaa gctcttccca cctttgttta ctttcaaagg
    29281 tgcaagcgct aggaacaata accaaatcaa ttttttttgc cataatctgt tgccaaaaaa
    29341 tatcaaaatg tgtttcaaaa ccaaaaagta aagcacattt taatttttca taattaaaag
    29401 taaaaatttt taattccgct tgaattttat tgctgaaaaa tttttcttca ttccagtgct
    29461 cataaggcat taaaatttgt tgttcataac ttttaacact atttggagta acttttaaac
    29521 aaagtttttt atagctttta gcttcaacac ttatataagg agcgatgatt tctagttcat
    29581 attttttaga aagtttgatc aaactttctt ttttagtctc gctttgctct tttatcatat
    29641 tttttggcat atgtaaaagt tcggtaaaaa aactattgat cacatattca cccaaaacca
    29701 ctaaatttgc cccattatct ttagatgctt tgagataata atcaagcctt gattcgctta
    29761 aagctaaagt tggaaactgt aaagccgcta ttttactcat cgatttgctc cacttctagt
    29821 tttgcttttt caagttcaag tcttgctttt ttaatacttt ctaaaccttc tttgtaaatt
    29881 tttacacttt catctaaggc aagatcttga ttgtttaatt tttctaaaga ttcattagcg
    29941 tgttttaaat tttcttcaaa actcattgat gattaacctt atagtttggt gcttcatgag
    30001 tgatagtaac atcatgtaca tgactttctt taagccctgc agtagtgatt tcaacaaatt
    30061 cagctttttt ttgaaaattc tctatatctt tagcgcctac atagcccata gaagaacgca
    30121 aaccccctaa aagttgatgc actacacttc ttatacttcc cacataagga acacgccctt
    30181 ctatgccttc aggaacaagt ttatcttgtg cagtgccttg ttgaaaatat ctatccaaac
    30241 ttcccttttg catagctcca agagatccca taccacgata agacttatac tgtcttcctt
    30301 gataagtaaa aagctctcct ggactttcat ctgttcctgc taaaagcgaa cctatcataa
    30361 cagaactcgc acctgctgct aaagcttttg ctatatcacc tgagtatttt atcccaccat
    30421 cagcaatcac aggaacacca aatttatttg cttcctccac gcattcatca atggctgaaa
    30481 tttgaggcac acccacaccc gaaacaatgc gtgtagtaca aatacttcct ggcccaatac
    30541 ccactttaac cgcatcaaca cccgcttcac aaagtgcttt tgctgcagct gctgtagcaa
    30601 tatttcccgc gataagatct aaatttggat atttagcttt aattgctttt actgtatcaa
    30661 taatgccttt agaatgtcca tgtgcagagt caagcacaac aacatcaaca cccgcttcaa
    30721 ccaaagcatc cacacaatcc atttgcccta ctcctatagc tgcacctacg cgtaatcttc
    30781 caaaattatc tttatttgca tcagggtatt ctttgcgttt tttaagatct tttatagtaa
    30841 taagtccttc taagcgtcct tgctcatcaa ctataggaag tttttctact ttattggtgc
    30901 taaaaatttt ttctgcatca tctaaagtgc aaccttttgg agcagtgatt aaaggcattt
    30961 tagtcataat attttcaacc aaatttgaaa aatcactctc aaatcttaaa tcacgattcg
    31021 taagtattcc tattagtttt tgattttcat ctactacagg aacacctgaa attctgtatt
    31081 ctgccatgat ttccaaagct tttgcaacac ttgccttagg atttacaaaa ataggatcga
    31141 taatcacccc actttcactt tttttcactc tttttacttc tctaacctgt gaagctatat
    31201 ccatattttt atgaataacc ccaagccccc caagtcttgc catcattata gcagctctat
    31261 gctcagttac tgtatccata gcagcagaaa ttaaaggtat atttaaagtg atattttttg
    31321 tcagcttggt atgaattttt acttccctgg gtaaaacttc agaatatcca gggcgtaata
    31381 acacatcttc aaaagttaaa gctcttttta caattttcat ctttcatcct caatttttaa
    31441 tcatttgttc taaacttaaa gccccgtcta ataaggtttg ctcatcataa gctttacaga
    31501 taagttgcgc tgatatattt agcccatctt tatcttttgc aacgggcaca ctaatgcctg
    31561 caagccctgc taaatttaca gaaatagtat aaacatcttc taaataagtt tgcatagggc
    31621 ttttttgagt attaaattta aaagctgttg taggagctac aggcataaaa ataagatcac
    31681 actcttgtaa aatttcttca tatttcgcct tgataaaagc tctagtcttt tgcgctttga
    31741 tataatacgc atcataatat ccactgctta atacaaaagt tcctagtaaa attcttcttt
    31801 ttacttcttc accaaaacct tcactgcgtg tatttacata catctctttt aaattttgga
    31861 tattttcaga acgcttacca taacgcactc catcataacg acttaaattt gcactcgctt
    31921 cagctgttgc gatgatataa tacgctgcaa tatcaaactt agaatcaagc aaatttttat
    31981 acacgatctc atgtccatta gcttttaaca tatctatggt ttttaaaagt gcatttttta
    32041 cttcactatc cgcatcattg acatagtttt caatcactgt gatttttaat tttttattcg
    32101 catttaaatt tggagctgtt ttgataaact cgatatttac actcgtacta tccattttat
    32161 catatcctgc aatcgcatca tataaaatcg ctgcatcttc tacattttga gttaaaaccc
    32221 cgatttgatc taaacttgaa gaataagaag ccaaaccata acgactcact cttccataac
    32281 ttggtttaaa tcccacacaa ccgcaaaaag ccgctggttg gcgtacagac cctcctgtat
    32341 cagaacccaa acttgccaaa gccaaacctc ccgccactgc agcagcactt ccaccacttg
    32401 atccacctgg aacgcactca aaatttaaag ggtttaaagt tctaccataa caagaacttg
    32461 ccgttgaact tcccatagca aactcgtcca tattacaacg tccaaaagga gtaaaaccat
    32521 tagctcttaa attaacaatc gcacttgcat cataaggagc gatataacct tgtaaaatct
    32581 tactcgcact ggtaagctcc caacctttta cactgatatt gtcctttata gccacgggca
    32641 caccttcacc tgaaacactt aagtctttat ctaaaaattg ttcaatataa gcacctaatt
    32701 ttttttcttt ttttgctttt tcattgagtt ctttttttaa attttcaagt tcttctttgg
    32761 aatattttaa agcttctttt aaagttatca tttatcttcc tttgtttttt tgatcaaaaa
    32821 taccgctaaa gcactaaaag ctaaaaccac tactatagtg acaataataa aactatttgg
    32881 aataggattt tctagcattt aacccctttt aaaacttctt cacatctcaa acaaggagta
    32941 tcttcgcttt tgctttgaaa tttccaacat cttgggcatt tataaagcga agcttttgtg
    33001 attttaaatt tctcattttc tatgtaaaat tcagccaaaa tttcttcatt ttcattagtg
    33061 atttgactta ccataaacca atcagctaat tcttcatttg gaaatttatc aaaattaaca
    33121 tttaaattta gttctaaagt agatttaata attttatctt ttttaagcat gtcaatttgt
    33181 tcgaaaaatt tctctcttgc actcattaaa aatgcatcat caataccaaa atcataatca
    33241 aaatcctcag ttaaactaag atcaaacaca tcttttgcat cacctttaat taaaatatta
    33301 gcgtgttcta aagcttcatc tacactataa cttaaacttg gagcaagcaa atttaaaagt
    33361 tcttttgcta tcaaagccat agccacttga gcagattttc ttctctgagc gttttcatta
    33421 tcacaataaa gtctatcttt actgatatca agataaattc cacttaaatc cgcacttaaa
    33481 aaatttaaaa gcaaactaaa acctttggaa aactcataag caaaaaatgc ttctttagcc
    33541 gctttaaaaa ctttagttgc acgacttaat atccatttat caataaaact aaattcttta
    33601 acttttaaat catttaaatc atttgtattg gcaagtaaaa atcttatggt atttcttatt
    33661 ttacgatact gttcacccac ttgttttaag atattatctg aaatttttaa atcacttgaa
    33721 taatcactca aaagtatcca aagccttaaa atttcaactc cataagtttt tgctacatat
    33781 tcaggggcga tcacattgcc tttggattta gacatttttt gccctttttc atcggtagta
    33841 aagccatgag ttaaaatgct ttcataaggt gcgctttcat tgattgctat actaacaagc
    33901 aaagaacttt gaaaccaacc acgatgttga tcacttcctt ctaagtacat atttgctctt
    33961 ttttctcctg catcataaag tccactattt aaaactgcat taaaagtact accactatca
    34021 aaccaaacat ctaaaatatc ataaaccttt tctaaatttt cagccttgta ttttgaattt
    34081 gcaggaatta aatctttgat ttcatattcc caccaagcat cagcaccgta cttttcaaag
    34141 atagttgcta caaattcaaa aagttcatca tcaaaaatca cttctttagt gtttttatct
    34201 ctaaaaaaag ctataggcgt tccccaatct ctttgtcttg aaatacacca atctggacga
    34261 ttttcgacca tagcacctat tctttttaat ccactttgtg gataaaaagt tgtttttaaa
    34321 agctgttctt ttgcacactc tcttaaagtt tttccttgaa gttttagctc atccattaaa
    34381 acaaaccatt gtttagtagc tctataaatc acaggcttat gtgttctcca acaaaacgga
    34441 taagagtgta taaatttaga agaatgtaaa agcttagaac ttaaaagctc taaaattttt
    34501 tcattagctt taaaaatatg aagtcctata aattcttcaa gcaaatgcga aggcaaaagt
    34561 cctttagttc ttaaagtctc atcataacat ccgccatcat ctacaggcat taaaacttca
    34621 atgccatatt ttaaacaagc ataataatca tcttctccat gacctggtgc ggtatgtaca
    34681 agtccacttc caccgtccat taatacatgt tcacccatga ttaaaataga ttttcttcca
    34741 tttaaaggat tgatagcttc gagtttttca aattctttcg cgtttaactc tttttgaatt
    34801 tcaccacttg taagtccttt ttctaccata cttttaagca aagcacttgc aaagatcaaa
    34861 ccttctttag tgatcacata attttcatta ggatttaaag ctatagcttg attagccact
    34921 aaagtccaag gagtggttgt ccatatcact gcacttgctt ttgaaacacc taatttttca
    34981 caagcattta cgtccaaatc aaaagccaca aagatagaat aatcttcctt atcttgatat
    35041 tctacttcag cttctgctaa agctgatttt gctgcccaac tccaaaaaac aggtttggaa
    35101 cgttcgcaaa gcaaaccttt tttagcaatc tcacacaaag ttctataaat agctgcttca
    35161 aactcaaatt tcatagtcaa ataaggctta tcccaatctg caataatgcc taaattttta
    35221 aattcttctc tttggatatc tacaaattca ctcgcatgtt gtctacaaaa ctcacgaatt
    35281 tctttcttgc ttaagctttt tttcttttcg ccaagtttta gttcaacttg ttgttctata
    35341 ggcaaaccat gacaatccca ccctggagta aaacgcacgc tctccccttt aaaataatgc
    35401 gttttgataa tcgtttcttt taaaatttta tttaaagcgt gtcctatatg aatatgtccg
    35461 ttagcataag gaggaccatc gtgtaaagta aaactttttt tcgtattttt gcgattttct
    35521 ttcatctttt cataagcata attttgctca aaccattttt taaatctttg cggctcaaat
    35581 tccgctaaat ttgcccgcat agcaaaggta gtgctaggca aaagtagagt ttctttgtag
    35641 tccatttttt ccacctaatt tttaataatc ttaaattcta ctcaaattag ctttaatttc
    35701 tactttgttt ttagctataa ttataagaaa aaaggaaatt ttatgaaaca tttgctttat
    35761 cttataggag atgagcttac tataaatgaa aatttcaaaa attacattta tagaacttat
    35821 gaagaaaaat ttaaagaaat taatgaaatt cgtatacaaa ataaaactga caaagatctg
    35881 ccctttttac ttgaaaatct cttaaacgaa tatgatttta ttactctttt tacaagccct
    35941 ttacactatg caactgttgc taaagtttta gcaaccttaa atgatgataa tcttatctta
    36001 aaagataata ccttggttcc agataaagca gaatttagta aaaatagctt tgtatgtaat
    36061 tttttaaatt caaaaatcaa tgtcattaaa ataaatccaa gcgaaaaatt acccaatctt
    36121 cttggagata taaaattgaa ttttgcatat ttttgtattt ttggcatgga tgatgagagt
    36181 gctatattac tactacaaac cctaacaaaa tcttatgaaa taagtataaa atcaagcaaa
    36241 cttttagata atcttgtgct cattaaggct acttgtgctc attttggaaa acttgatggt
    36301 tttttaaata gtgtaaaaaa tctttttgga caaaaaatat ttttaggtaa agatcctata
    36361 tattttatag cttctaaact tttagaaaaa aaattaaaaa tttcttttgc tgaaagttgc
    36421 acaggtggac tttgtgcaag caccttaact aaaatttcag gcgtaagtga aatttttgaa
    36481 ggctccatta taagttactc caaccgcatc aaacatgaat ggcttggcat tagcgaaggt
    36541 attttagaaa ataaaggcga atatagcgaa cgttgtgttt attttatgtt aaaaggtatt
    36601 tttaaaaccg ctaatcctga tttcgcccta gctattagtg gagtagctgg cgaagaagat
    36661 gaaggaaaga taaaatcagg cactatttat ataggagcaa tgtttaaaga tggaaccttt
    36721 attcaagaaa cactttattt agatggagat cgtaaattta tacaagaaca agctgttttg
    36781 gcaacttttt gtctactttt aaaattaaaa cctgaaattt ttgaaattta gaggtaaagg
    36841 cataagtcaa gcttttttga aaaaatccaa atttaggcaa aaagaaacaa agatatggag
    36901 aattgaacta aattcaagtt tttttagaac gcaaacttat gaattttatc aaaaaatgga
    36961 ttctgaaaaa tcgggttttg tttttaagaa aaatatcaaa ctataaattt tataattaat
    37021 attattattt ttaattttaa ggattacaat ggactttaaa gaactgattt taaaacgcag
    37081 agcttgtaaa cttttcaatg ataaaaaaat taatgagaaa gacttgtatt ttattttaga
    37141 aagtggagtt ttaactccaa gctcttatgg atttgaacct tggaaatttg taatattaga
    37201 acaaaaagaa cacaatctta agctctcaac cctatgctat aatcaacaaa atgtagcaag
    37261 tgcaagccat aatatcattt ttctagcaag aaaagatctt caaagcaaag atgaattcgc
    37321 acaaaaacaa gtacgtcgct tctcaggttc taacgaagaa aattttcaaa aaattctaga
    37381 aatttacact cataaaacca atacaatgag tgataatgaa ctctatcatt atgcacaact
    37441 tcaatgctat cttgccatga tgcaaatgtc attagctgca atcagcttag gtattgattc
    37501 ttgtatgata ggtggctttg aaaaaactaa agttgatgat tttcttaatt taacttatcc
    37561 ttttgaaact gctgtaattt tatctttagg ttataaagct cacgaaccaa aatatcatac
    37621 ccaacgttta aattttgatg aagtggttga attttacaag gaaaaataat gaaaaaagaa
    37681 cttgaaattt ttagcacaag atattcttgt agaaatttta aaaacgaaaa actcaaagaa
    37741 gagaatttaa actctatttt agaaatggca agattaagtc ctagctcttt aggacttgaa
    37801 ccttggaaat ttatagtaac acaagatgaa aagaaaaaag aagaactttc tcaaatttgc
    37861 aaccaacaaa aacatgtaaa agattgcgct gcattaatta tcattatttc aaagctcgat
    37921 tttttagatt attttgaaga aaagcttaga aaaagagata tgagtgaaat agaaattcaa
    37981 aaacgcttag atacttatat gcctttttta aaatctctaa ataaagaaca aaaaatatcc
    38041 tatgcaagag aacaagctca tatagctcta gctagcatac tttatagtgc taatgctttg
    38101 aatatagcaa gttgtactat aggtggcttt gataaagaaa aacttgattc ttatttattg
    38161 cttgataccc aaaaagaaag atcaagcttg gtagtagctc taggatattg caatgatgaa
    38221 aaaattccac aaaaaaatcg ttttaatttt gatgaagttg taaaatttat ttaaaatttt
    38281 gctttttaag tagaatttta aataaaataa attaattctt ttttatattt ttactaagtc
    38341 tttgcctaaa ttttatacaa ttttgactat aattttatat ttaatttaac aaggcttgat
    38401 atgaatttac ccaatatctt agcaattttt agaatggttt tggcgccttt actatttttt
    38461 ttactaagtt ataaatttga aaatatccac caaagctgga ttaattattt tgctgcttta
    38521 accttttctt tagcggcctt gagtgatttt tttgatggat atattgcaag aacttggaaa
    38581 caaaccacaa aactaggcga aatcttagat ccactggctg ataagatgct cgttttggca
    38641 gcttttttag gtttgctttt aacaggaaaa gctaacgaat gggttgttta tatcatacta
    38701 gtgagagaat tttttattac aggttttaga gttgcgatga taagtgaaaa tttaaatgtc
    38761 aatgcttctt ttgcaggtaa acttaaaacc gcatttcaaa tgactgcaat aggattttta
    38821 atcatggaat ggataggcgg agaaatttta ctttatatag ctttaatttt aaccttatat
    38881 tcgggatttg agtatattta tacctatacc aaagctcaaa aaaaaggaag agaatgaaat
    38941 ctttattatt tttaattgtt atcataattt tagggattaa attttattct attgaatttc
    39001 ttgcaactat tttggtaatc tcgtttttaa ttttcttcca tgagttagga cattttttag
    39061 ctgcaagatc tttaggcgta aaagttgaag tctttagtat aggatttgga aaaagcctta
    39121 tagagcgtaa ttttaaaggc acaaactatc gcttaagtgc tttaccactt ggaggatatg
    39181 ttaaacttaa aggacaagat gatatgcgtc ctggttttga aaatttagac aaagatagct
    39241 atagtatttt aagtcctttt aaaaaaattt acattctctt tgctggaccg ttttttaatc
    39301 ttattttagc tttttttctt tatatcatca tagggaattt aggaataaac aaacttgctc
    39361 cacaaatagg caatatagca ccaaattctg ctgcacaaca ggcaaaactt caaaaaaatg
    39421 atataatttt agaaatcaac gacataaaaa ttcaaagctt tgatgaaatt ccaaaacatt
    39481 taagtttaga acctttgaaa atattaatca acagagaagg gaaaaactta gaatttgttt
    39541 taactccaaa attaggacaa ggatataacg actttggaca aatcattgaa aaacctcaac
    39601 ttggagtcag tccaaatggt gcaagcactc ttgtaaaaca tcaaggttta gaaagtctta
    39661 gatatgccgt acaagaaagt tttcaagcct ccacacttat cataaaaggc ataggaaaat
    39721 taataagcgg tgaggttgat gcaaaaaatt taggtggcat tatcaccatg actgaaatca
    39781 cctcaaaagc tgcacaaaat agttttactt tgcttttatt tatcaccgct ttaatctcta
    39841 taaatttagg tattttaaat cttttaccta tccctatgct tgatggagga cacatacttt
    39901 ttaatctcta tgaaatcatt tttagacgca aagttcccca acgtgctttt gaatatttaa
    39961 gttatgcagg catggtagta cttttaagtt taatgctctt tgcgacttat aatgacatat
    40021 caaggattat aggtgaataa aaaattttcc tatcctactc caaattttac tgataaaaga
    40081 aagagtatca tcttttggcg ttatttgcgt tttcaagcaa gaaaaatttt atactttcct
    40141 caaataagac ttctagaaaa aacacttaat gacaaaaaga ataaacattt gaaagatttt
    40201 ttctctcaaa gaccttatgc ttgttataat gttgcaagaa gattttgtga taaaagtttt
    40261 aaggcaaatg aacgcattaa aacacttatt tatgatgtta acaaaggact tacttgtttt
    40321 aaatttcttc ccaaggaaca attggttttt tcttttggtg aagattttga acttttttta
    40381 ggatataatc accatgtttg cgaagaaggt ttttgggctt tttctttaaa gtttaaaaaa
    40441 cacactattt tgcaatgtag tttttgtttt actttggaaa acaatcttct actttcttgc
    40501 atacaagggt ataaatataa agatttcaat actttagaaa ttaataaaat tttaaccaaa
    40561 aaatgctatg gtttgcgtcc tattgcttta cttatagaat gcaccaaaat actctgtgaa
    40621 attttaaaac ttcaagctac tttgggtgta catgagaaaa atcaaattcg ctctgaaaaa
    40681 ggcaaaaaca aaggatattt tatagattat aaaaaaattt ggctagaaaa tggaggagag
    40741 cttgtcaaaa taaataaaca taattattac aaactctctc attctcaaaa aagtttagaa
    40801 gaaataccta gccaaaaacg ctccatgtat aaaaaacgtt tcactatgct tgaaggtatt
    40861 aggcaaaatc taaaaaattt atttagatat caaataaatc attaaaagac tcactcattg
    40921 ttgggtgagt ataaatttga tctcttaaaa cttgatattt taaattagta tccatagcaa
    40981 gtttaacaat attaatcatc tcatgagatt cttcacaaaa aagcattgct cctaaaattt
    41041 cgtcattttc ttcatttatg attgctttta gtaaaccata agttttttta agaacttgtg
    41101 ccttagggat tgctacaaca ggcaatttta ccactttaat tctataacct gcatcaattg
    41161 attctttttc atttaatcca actcttgaaa aaggaggatc gataaagaca ctataaggaa
    41221 taacctttct tttagatttt gtataatttt gttgcctaaa tggagcataa gctattctat
    41281 aatcatctaa agaaacataa gtaaattgta aacctccatt tacatcacct agagcataaa
    41341 tagaatcttt atttgttttt aaagtatcat caacaataat aaaacctctt ttatcgagtt
    41401 gaatgccggc tttatcgcaa cttaatccaa gagtatttgc ctttcttccc gttgctaata
    41461 agatcatatc acattcaatt tcgaaatctt ggtgatcttg agtaaaaaac actatacttt
    41521 tttgatcaaa atctttaatt tctttaaatt gaactcctaa tctaatatca atctgtttat
    41581 tttctaaatt ttgaaaaatt aaatctgcga aatctttatc ttctttacct aaaaaagtat
    41641 cgttcctttg caataaggtt accttagaac caaaattagc ataaatacaa gcaaattcta
    41701 aagcaatata acctccacct atgataacaa gatgcttagg taaattttct tgtgccatta
    41761 attctttgct tgttaataca tttttacttt gatctagtcc ttttatatct ggtataatag
    41821 gaatcgagcc tgtattaata taaattctat cggcactaat ttgaacttct ttttcgccct
    41881 gtattaacaa agttttttca ttaataaaag aagcttttcc aagatataga gtaatatttt
    41941 ctaaagcatt taacttatca taattttttt gtcttaacat tgcacttaat tgtttttctt
    42001 ctaaaatagc attgtaataa aaattctgtt ttatttccca atttgcattt ttatcagcac
    42061 aaagagagtt ttttaccaaa gacttagaag gaatacaacc aacattaatg caagtccctc
    42121 cgtacatatt ttcatcttct tctataagag caactttttt tcctagcatt gcaagttttg
    42181 ccgctaaagt ttttccaccc ttaccaaagc caataataat aacttcataa tgcttcattt
    42241 ctcttcctta atttattttt tgcttatatt gatgatatct ttcattaaag aatctatttt
    42301 atctactaaa acagtatttt taatatgata tttttgtatt tttgatttta aactgacata
    42361 acctataaaa gtttcattat tttgatcttg ccagattaaa atttttaaag gtaattcaat
    42421 acctatcatt ggattttctt gcatcaaata agttcctaca ataggattac caaacactat
    42481 aactgtattt gattttaagg tcaaattaac atctaatgca ttttgatagt gatcaaattt
    42541 tgcaaaaatc gttaaatttc tatctttaag ctcttgctca actcttttta tcagctcatt
    42601 aaaattatat ttactttttt cataaataaa atcatcattt gcaaataaac tgctaaaaca
    42661 cataaacaac aaaaccaata tttttttcaa ttttaatcct ttctcaatta aggtcgtatt
    42721 ttaaaaaaca ttgcattata acagtcgaaa gtaaatcaaa acaaatccat tgcttattaa
    42781 ttgtttgata atggcaatga taatttacat attaacttca ttgaagtata aattaagtat
    42841 attatagtat aatttgctct tgctttaatg caaaatcctt gctcataaaa tgggctttat
    42901 atccataagg agaaaagatg aaacattatg aggttttatt tatcttaaaa ccaacgctta
    42961 ccgaagagga agtgaatgca aagttggaat tcgttaaaga agtcctaatc aaaaatggtg
    43021 cagaaattga aactgttgtt ccaatgggca ctagaaaact agcatataaa attaaaaaat
    43081 acgaaagagg aacttatttt gtgatttatt ttaaagctcc tacaaattta attgcagagc
    43141 ttgaaagggt attaagaatc actgaagaag tgataagatt tttaattgta aaatatgaaa
    43201 ataaaaaaga aattgcagct tgggaaaaac taagtcacgg aatcaagcaa tctaaaaaag
    43261 aaattaaacc tttagatgct cctgaaattc aataaggaaa aaaatgttta acaaagttgt
    43321 tttggttgga aatcttacac gcgatataga aatgcgttat gtacagaatg gaagtgctat
    43381 cggatcttct gctattgctg taactagaag atttaccaca aacggagaaa aaagagaaga
    43441 aacttgcttt attgatataa gcttttatgg tcgcaccgca gaagttgcaa accaatacct
    43501 tgcaaaaggt tcaaaagtac ttatagaagg acgcttaaga tttgaacaat ggagtgatca
    43561 aaatggacaa aatcgctcta aacatagcgt acaagttgaa aatatggaaa tgctcggcaa
    43621 ttctaacacc tctcagcaag gtggaaattt tggtaataat agcttttcaa acaacaatta
    43681 taatggaaac tatgaaaatc aaagctatga tccttatatg agtgaaaatc aaaatttcaa
    43741 taaaacaaaa tcaaatccag ctccacaaag aaaccaaaac ccacagcacg aagaaaaatt
    43801 aaaagaaatt gatatcgacg cttatgatgg cgatgatact aatttaccat tttaaaggat
    43861 aaactatggc agaaaaaaga aaatactctc gcaaatattg caaatatact gaagcaaaag
    43921 ttgaatttat tgattacaaa gatacagcaa tgttaaaaca tgctttatct gaaagattta
    43981 aaatcatgcc acgccgtcta acaggcacaa gcaaaaaata ccaagaaatg gtagaagttg
    44041 caatcaaacg tgcaagacat gtagctctta tcccttatat agtggataga aaagaagtaa
    44101 ttaataatcc ttttgaagga ctataatctt tattttaaaa gcaaacttgt aaaaaagttt
    44161 gctttttata cttatcccta aacaaaccta aactaaagta tattttaaaa catcattaaa
    44221 agtatcaacg gcaataattt tcatattgtc tttgacctca ttaggaatat cttttaaatc
    44281 tctttcataa ttttttcttg gaatcaaagc cgtttttata tctgctttgt aagctgcaat
    44341 taatttttct tttaatccgc ctattggtaa aacttttcct tttaaatcta tttcacccgt
    44401 cattgctaca tctgccctaa cctttttatc gctaaaaata gaagcaatag ctgtacttat
    44461 cgtaatgcca gcacttggac catcttttgg agtagcccca tctggaacat gtatatgaat
    44521 attataacta tcataaacat taaccttagg atcaataatc atttttttag gtatttttat
    44581 ctttccttca tcaattaaaa cttttatcat actaaaagca attctagccg attctttcat
    44641 tacatcgcct aaacttcctg tgagtgttaa ttctccttta cctttaattt ttacagcctc
    44701 tacttttaaa acatctcctc ctacgcttgt ccaagctaaa ccattaacct gacctatttg
    44761 attttctcca tcattttttt ctatttcaaa aactttttta tctaaaaatt cattcaaatt
    44821 ttttacattg atattaactt ttttaatatt ttctaaaagt aactttttag cacccttgcg
    44881 acataattct gctactttac gacgcaaatt tctaactcct gactcacgag tataatcact
    44941 aatgatcaat tctatagttt catcatcaat agatagttca ttagctttta agccatgttt
    45001 tttaagctca tctggaatta aatatttttt cattatatga aatttctcac ttggagtata
    45061 agaactcaat tctataaatt ccattctatc tcttaaaggc gcaggaatat tactaatatc
    45121 atttgctgtt gctataaaaa taactttact taaatcaata ttaaaattta aataataatc
    45181 cctaaattta gaattttgtt ctggatctaa aatttctaaa agtaccgcac ttggatcacc
    45241 tctaaagctg cgatttaatt tatcaatttc atctaataca attacaggat taatttgttt
    45301 tgcctctata agcccttgag taatacgtcc gggcatagca cctatatagg ttctacgatg
    45361 cccgcgtagc tcattaacat cttcaagtcc acctaaagct atacgaataa gttctctttt
    45421 taaagctttt gaaacagaat ttgccagtga agttttacct acaccaggag gtccataaag
    45481 gcaaagtata actttagcac catctttttc tgctattttt cttttttcca aaagctctct
    45541 aactgcaaaa tattcttcta tgcgttcttt tggtttgttt aatgcgtaat gatcatgatt
    45601 aagttgcttt gaaacttctt taatatcaag ttttttctta gaaatttttt caaaaggaac
    45661 atctaatgct gtttctatat aagtttgaat catcgatgct tcagaattat cttgatgaat
    45721 gcgttcgaat ttttcaactt gctttttgat ttctttataa gcatcttcat gcataaattt
    45781 tttctttaac tctaaacgct tttgatactc tcttacttca tcttcttttt gcgtatcaga
    45841 gccaagttct ttttgaattt gccttaattg ttcttttaaa aaatattctt tatttacctt
    45901 atcaatacga gaatgcactt tatttttaat ttctttttga attttattgg cttctatttc
    45961 ttgggcaatc aaatctatta attttaataa tttttgctca agatctgtta aaataaaaaa
    46021 ctcataagca acttgtttct taatacgcac agtatttaaa atcaaatcac aaatcctaga
    46081 tgcatcaaaa ccttcttcaa ttgttcttaa aagatccgga gaaaaataat agctgatatt
    46141 tgccaaattt tttatcttct cctttaaaac ttcaagaagt gcttcttttt tagtcccttc
    46201 tagaaaatct tcttttataa gctctatctt agcttctaaa ggcttattag aaatttgttc
    46261 tataatttta cctttagcat acccttggaa aagtattttt acccttccat cgggcaaagg
    46321 aacttttcgc atgatagttc caatcactcc gcaattataa atttcatcaa aatttcttcc
    46381 attttctagc tttgaaggtg caacaaaaag catgctatca tttttaattg caagctctaa
    46441 agccttcata ttagatgaat cattaataaa aataggagtt atcataaaag gatataaaaa
    46501 taattcatct tcaaccaaca cgggtaaatt tgctggataa ttttgtattt cttcaatctg
    46561 catttatttt ccttacctat taaaatcttt caaatatact tctataccaa ggaagctcag
    46621 gcttaataat actttgctga taaaattcac tttcttgaag tctttgtttg taaatttgtg
    46681 cactttcatc atgccctatg cgctgatata gattttctat agtactatca agataaaaaa
    46741 ctgctaaatt aaatttcgta agcattgttt gaactaaagg ttcatattct gtataaggat
    46801 aatcttttaa aaaagtatct atttcttttt ggctttcaag cattaaagcc tgattgcgat
    46861 ttggtactgc aaatgcatca aattttgcct tgattttaag ataacggata taatcagcat
    46921 tacgtgaatt tccaaatttt ttattatatt catctaaata aaattcagct aatttatatt
    46981 cttcttcatc catatgagct tgtgctaaaa taattaaagt agtttccaat aaaggatcag
    47041 caacatgctc gcttgccatg ccattataat gatcatcagc tttttccaaa tccttatcct
    47101 gtaaatcttt aataatttgc ttataccact cactagcact aagattatat aaaccttcat
    47161 gattttttgt gctacacgcg ttaaaaaaaa tacctaaaaa aaccaataaa aaaatacctt
    47221 tcttcatacc tcaccttgat tcatattctc aaaaatatat attttaacga ttttataatt
    47281 atgttcttct aaaattataa taaaattaat taaataattt aaaattttgg aatgattatt
    47341 gcttatttta tgttaaaata ttaaacatta taacttgagg agaaaacatg accctggctg
    47401 ttaaatgccc tatcttaggt tttgaggaaa ccaaaaatat ggaattttca actatcgatg
    47461 aagtatttgt aagacttaaa agtcttgatg gtaaagactt ttcttttgtt ttaattaatc
    47521 cttatttaat tagacctgat tatgaatttg atataccaac ctattatcaa gaacttcttt
    47581 ctttaacacc tgaatctaat atgaaaattt ttaatatagt agctatagca aaaagtattg
    47641 aagaatctac ggtaaatttt ttagctcctg tggttatcaa tcttgataat aacaccatgg
    47701 tacaagtgat actagataca gtcaattatc ctgatttttt ccaagctgat caaattgcta
    47761 attatattaa aaaataatgc tctatatact tgcaaacgga gctatggcaa cagccttagc
    47821 ctatggatta aaagataact atgaaatttg catagtagga agaaatatag aaaagcttca
    47881 agcactcgct aaggaaggtt ttaaaacttt gctttataaa gattttaaca taaaaggcaa
    47941 agatgtgatt ttagctttta agccttatgc tttagaaaat attgctcaaa tgctaaaagg
    48001 acaagcgcgt attttaatct ctgtcttagc taatgttgat tttgaaaaac tacaagtcat
    48061 caaagctcaa aattatgtta gaataatgcc taatacagca gctaaataca aggcttcaac
    48121 tacaccatac atacttaaaa attctcattt tgaaaatgaa attttaaata ttttaaaaac
    48181 ttttggttcg gcttataaat tagataatga aacacaaatg aatgctgcta tggcgattag
    48241 tggttgtgcg cctgcttttt tagcacttat agcagaaagt attgctaatg ctggagttca
    48301 tgaaggttta ccaaaagaac ttagtctcaa tcttacccgc tctttattta aaagctctag
    48361 cgttctatta aaacatgaac atcctgctat tatcaaagaa aatatttgct ctcctggtgg
    48421 agttacaata aaaggtataa aaatactcga acaaaaaggt attcgcggaa gtttctttga
    48481 agccataaat gctagtagca ctaaatgaaa aaagctttta tactgataga aagcattagt
    48541 gctataatga tcatatcttt gatttttatt ggtatttttt attattatac tcaactttat
    48601 aaaaactatg aaaatttaaa tatttttgaa aggctctata aacttcaaga aaaactatat
    48661 gaaaagccta ttttcaaaac tatcatactt caaacctcaa ttttaaaacc tataattata
    48721 caagaacaat ttgtcagtga tgatgtattt aaatttcaaa aattatatct tcaagatcaa
    48781 aattatagca tttattttag agaatgaaca aagcctttac actttttgaa cttgtaatat
    48841 cactaatac
//
LOCUS       DAPWAA010000004        37607 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.004, whole genome shotgun sequence.
ACCESSION   DAPWAA010000004 DAPWAA010000000
VERSION     DAPWAA010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 37607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37607
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.004"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..433)
                     /locus_tag="RTF91_000202"
     CDS             complement(<1..433)
                     /locus_tag="RTF91_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HDZ4943138.1"
                     /translation="MWNLDEKKLQEMLDGFLNFQEVWTLEKVKNMTLEEYTNIKKDNP
                     NRDDFTFWIESKLDNLGSIWGGSAFKFGIYRRNDESQKESSSGRLYSQNYAWIAKYGN
                     NENEAFNNIKEKIIQIIQASQDNNLKAIEKIDFGNAIKWKIA"
     gene            complement(482..904)
                     /gene="rimP"
                     /locus_tag="RTF91_000203"
     CDS             complement(482..904)
                     /gene="rimP"
                     /locus_tag="RTF91_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDZ4943139.1"
                     /translation="MNLEALCKEAELSFYDDELVSENGRKIYRIYVQKEGGVNLDDCA
                     RLSEILSPIFDVESPVNGEYFLEVSSPGLERKLSKIEHFVKSIGELVKITTNEKEKFE
                     AKIIAVDDENITLENLENKEKTTINFNDIKKARTFVEW"
     gene            complement(894..1256)
                     /gene="rbfA"
                     /locus_tag="RTF91_000204"
     CDS             complement(894..1256)
                     /gene="rbfA"
                     /locus_tag="RTF91_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDZ4943140.1"
                     /translation="MNPSEIKKLRTESILKELIPEALANLDDENLKNLCVVDVECKKG
                     RYDAFVYLDKMFFNIHEQEKILSSLKKASKALQNYCMSEQGWYRCPNFHFKFDDRLEY
                     QNHMDALFEKIKKDKNES"
     gene            complement(1253..3862)
                     /gene="infB"
                     /locus_tag="RTF91_000205"
     CDS             complement(1253..3862)
                     /gene="infB"
                     /locus_tag="RTF91_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDZ4943141.1"
                     /translation="MAKIRIHEIAKELGYDSKEIIEKANELGLRIKMASNAVEPEIAA
                     AIYEYIQTREIPEAFKKNIKTPKKPKKENIKEQEKLNESGKKESKKEEKLKQEIIKEE
                     VKTQKESAKEQEKQEIIDDRKPQSLASATLAKRRGLVIVKKKKDEEEIQVKKEEVKNS
                     NDVSINNEERLSLKTMFSNADESLKKKKKEKKAFVASKKENIEKMNFLDEHDFGDISL
                     DDEDEVVLPDFSVKEQERPQNINKKQPNFIRQAIGNSAGFGLEGGIQRRSRKKPPKKI
                     EKKEVEEVSSVSISKEIRVYEFADKIGKSTSEVISKLFMLGMMTTKNDFLDEDAIEIL
                     AAEFGIEINIINEADEFDYVKDYEQEVDEKDLVTRAPVITIMGHVDHGKTSLLDYIRK
                     SRVVSGEAGGITQHVGAYMVQKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVVAA
                     DDGVKPQTKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGSYE
                     FVGVSAKTGMGIEDLLEIVLLQADILDLKANPKSFAKASIIESSVQKGRGAVATIIVQ
                     NGTLSVGSTVVAGEAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIAVK
                     TDKEAREYANKRHEYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSLEA
                     LKSSLEKLRNDEIKVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEIKERAKD
                     KGVEIKTYNVIYNLLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKIGQIAGCMVT
                     EGVINRGAKIRLIRDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVGDY
                     IESYKEVQEQASL"
     gene            complement(3849..4106)
                     /locus_tag="RTF91_000206"
     CDS             complement(3849..4106)
                     /locus_tag="RTF91_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HDZ4943142.1"
                     /translation="MKKHIPIRMCIVCKNRFEQNALFRFKVVLGDIIPKAEDGRSGYL
                     CQNCIEKEDKILQKAFSKICKNLNTKITQQGLKEIFLNGKD"
     gene            complement(4131..5009)
                     /locus_tag="RTF91_000207"
     CDS             complement(4131..5009)
                     /locus_tag="RTF91_000207"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDZ4943143.1"
                     /translation="MKILVPATSANLGPGFDCLGLSLKLFNETQIQKSCVFSISIKGE
                     GSDNIFLKKNNIFVNIFYEIYEKLSGKRDNFRFIFQNNIPLSRGLGSSSAVIVGAIAS
                     AYYMSGFKVEKERILDEALIYENHPDNIAPATLGGFVCSLVEKNKIYSIKKEIDKDLA
                     AVVVIPNLAMSTEQSRQALAKNLSFNDAVFNLSHASFLTACFLEKKYEFLKFASQDKF
                     HEINRMKNLPELFEVQKFALANQALMSTLSGSGSSFFSLAFKDNALALAKKMQEKFKD
                     FRVQYLEFDDNGFEIC"
     gene            complement(5018..5419)
                     /locus_tag="RTF91_000208"
     CDS             complement(5018..5419)
                     /locus_tag="RTF91_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine biosynthesis
                     protein TsaB"
                     /protein_id="HDZ4943144.1"
                     /translation="MIGIYQDDKLVKTYESEEKASEFLPKILDKLLKQYDFTSLIYTN
                     GPGSYMGIKISYVSLRTLSIVKDIPLFAVSAFELNDYKPISANKNFCFVYKEGEICLE
                     QNTPAKFFLPKNLQELKLNNDNLPFYFLDVI"
     gene            complement(5458..6342)
                     /locus_tag="RTF91_000209"
     CDS             complement(5458..6342)
                     /locus_tag="RTF91_000209"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDZ4943145.1"
                     /translation="MKQLTLAKTVKGVGIGLHKGEPIEITLEPLEADSGIVFFRSDLN
                     VSYKASPENVINTQMATVLGDDRGFISTIEHLMSAINAYGIDNVRIVLNANEAPVMDG
                     SSISFCMMLDEAGVKELDAPKKIMVIKKSIEVRDGNKFVRLTPTKEPRINYTIKFDNA
                     VIGEQSYNFEFSKKNYIENIARARTFGFLKDVQALRSMNLALGGSLENTIVVDENRIL
                     NPEGLRFKDEFVRHKILDAIGDLTLLGYRVFGDYTSYAGSHHLNHLLTKEVLKDKDAY
                     EIVSLEKTTQKAYEKVFV"
     gene            complement(6342..7715)
                     /locus_tag="RTF91_000210"
     CDS             complement(6342..7715)
                     /locus_tag="RTF91_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDZ4943146.1"
                     /translation="MPKRKDKTYLSVLILVLIAILIFFISRLSIFEKSSPQILIPDVV
                     YTDLKKPILVHVKGDKSSIKNVQIMLHKDDNTSAMVITDEKISNLKDITLQVTLPKFA
                     YKENVKSFVLEVIAKDSSLWNFFSGNKARKQIAVLIDNTAPKINIISNSYQIEQGGAA
                     AVVFKADDANLDKVYIKTNKGKIFKATPYVKEGYYAALIAWDARDEEFRAFVVATDKA
                     GNISKERIRYHSVNRKYRVSNINLTDKFLDGKIKNLASRYAPKDNNFNRYEKFKFVNE
                     TLRNNNEELIHEITSKVPEEKIDNFGLNLFLPLKNGMKVADFADHRYYSYNGQFVSDS
                     YHMGIDLASVAQAPIVSNNSGKVVFAAENGIYGLNLIIYHGFGVYSLYGHCSFKNVDL
                     DEVIDKQSIIGRTGTSGLALGDHLHFGVLVQGVETRPEQWQDKRWIENNIYNVLNHGK
                     KIILGKN"
     gene            complement(7796..8623)
                     /locus_tag="RTF91_000211"
     CDS             complement(7796..8623)
                     /locus_tag="RTF91_000211"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HDZ4943147.1"
                     /translation="MKIAIIGLGLMGGSLGLYLKENKLISCVYGMDLSKENEKDALKL
                     GLIHELIEFKDLALCDIIFIATPVNVIIEILQKLADLPSNVTIIELGSTKRKIIESLP
                     RNLIKQTLFAHPMTGTENSGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLG
                     MKIVFMDSKAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAK
                     SSPQMWESIFLQNKDNLLNSIDFFQQELERCKQMIQLDKNDELREWMKQANTLREIL"
     gene            8699..10918
                     /gene="bamA"
                     /locus_tag="RTF91_000212"
     CDS             8699..10918
                     /gene="bamA"
                     /locus_tag="RTF91_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDZ4943148.1"
                     /translation="MKKYFISICALVAMANAVTIKDIKFIGLNHLSNASAINITGLKI
                     GEEINPAKINTAVLNLYKQNYFENIAVENNNGVLEIIVTEKPIIAKVSITGIASNDRK
                     QVESILGIKRGTLLDEGSIKEAIERIKAYYEAKSYFDTIVEYKKKTLENTDGLELEFI
                     VNRGENIIIDNVYLSGAKKFSYSDIEPAVVNKEKEFMGWMWGRNDGKLKVFELSNDSS
                     RIADEYMKKGYLDIQVSSPYLKTYTDTYQANLTYFIKEGKPYKIKSISIENPLFNDKQ
                     NAQTVKDLQSSAGKTINIEDIRKDVKTIETQSADLGYAFVEVYPDIQKNDQTQEATVV
                     FKVIPHDKVYIRNVIISGNSRTVDRVIRRELYITEGNLYNRTDLSESKNALKRTSYFD
                     DVNIKEEKVDDTHIDLIVDVKEASTGAISGGIGYGSSDGILLNASLSDTNIFGSGIKS
                     SVSVDKSDDTLSGRISLINPRVFDSQYSLGGTLYSNDYEWDNYSEKNYGFDITVGRQF
                     ARYYNVSLTYNLEQSDIYHLSPTLLRTGYELGKSIKSSVTPAITFNNTDDYYLPRSGI
                     IASTSLEYAGLGGDQEFISSSSKFNFYQGLQNYIGYDLIYRYKASFYKVWDEGYLPIN
                     QRIYLGGIRSIRGFESRTVSPKNQWGDEVGGTIAFANSVELSFPLIDRIKLRGSVFFD
                     YGMIGRKNLDEIKRMSTGIGIEWITPIGPLQLVFAKPLNDKKGDDTNSFEFNLGTRF"
     gene            10918..11643
                     /locus_tag="RTF91_000213"
     CDS             10918..11643
                     /locus_tag="RTF91_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HDZ4943149.1"
                     /translation="MKEFLDACLNANLQIRKYLNNIPQNDLKLCSRLGYNENQGYELD
                     LKCEQIFIKYLSCFGQIFSEESGLIGETSSRQMILDPLDGSSNFVSKIPFYGTSIALM
                     EEDQAKSAFICNLVSQEIFAFSDNQAFKSNLSNPKYSPLTSNLFSTIGIVEKISLRPE
                     LLGFLTKNQLKFRSLGATALSLAYTSYFSFVLILGETRIFDTAGALIIHQNLYIEKNE
                     NFLLLSQDKKIFDIILEFLKNNR"
     gene            11648..12490
                     /locus_tag="RTF91_000214"
     CDS             11648..12490
                     /locus_tag="RTF91_000214"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HDZ4943150.1"
                     /translation="MNFADIFSKIRRQQPSTKEAPNHWVKCQNCHALMYYKEIESCFN
                     VCPKCNYHMRISANERIKLLSDEGSFVEYNANLEAIDPLKFVDSKSYKKRLSEGESKT
                     GRKSSVISGECEINGLKTQLVVFDFSFMGGSLGSVEGEKIVRAIQRAITSKTPLVIVS
                     ASGGARMQESTYSLMQMSKTSAALKLLSKEKLPYISILTDPTMGGVSASFAWLGDLII
                     AEPEALVGFAGARVIKQTIGADLPEGFQKAEFLLEHGLIDAIVERGEQKQYLSDVLKF
                     FNGK"
     gene            12492..12941
                     /locus_tag="RTF91_000215"
     CDS             12492..12941
                     /locus_tag="RTF91_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDZ4943151.1"
                     /translation="MQVNIFYIQKSDEFKAWSEKYSKLISKYATLKEINVFNKKIALA
                     QNLSAIEAKKSYEEAFMPYKKGYCIALDERGKDLTSIEFAKLIQDKNELSFFIGGAYG
                     LREEFNQNLDFRLSLSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK"
     gene            12953..13315
                     /gene="dksA"
                     /locus_tag="RTF91_000216"
     CDS             12953..13315
                     /gene="dksA"
                     /locus_tag="RTF91_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK suppressor DksA"
                     /protein_id="HDZ4943152.1"
                     /translation="MKKNEIQNFKNILEERKKAILENLQSNSNEIEALHNSVPSDSVD
                     FSVIETGSQIDFAISTNLKKELIEIEDSLDKIKNGTYGICESCDDEIDFQRLKVKPHA
                     RYCITCRQIAEQGKKHEN"
     gene            13305..14291
                     /locus_tag="RTF91_000217"
     CDS             13305..14291
                     /locus_tag="RTF91_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943153.1"
                     /translation="MKIKLFLLASFIYIALIFTFAWHLELGNYTLNISTYTFELPIMI
                     WLVIPLFVYMILAVLHIAFYGFLRYLKFKHFFKDAAKFESYTQDLLLEKDLKTAFQTK
                     EFRAVAQLFKTVKTHEKIPHSHKINEILDLIDGLNKNEFFNLSKFKLENNNTLYLQNE
                     KNHLKNDANYAYTKVKNLNEIKDEFEEIAFSTLIEKGNYEQIKNVKIPKKPCQVLTLI
                     KRFKEGNLELSIAEYEVLLSHNILNEKNYLDAAKLSTKLLNPDAIIGIFNKIKNEKSE
                     ALKAYLYLLAEFGLLDELREQIHNDDKKFNDFKAFLTLREKNIKIDLNQLIQ"
     gene            14288..15223
                     /locus_tag="RTF91_000218"
     CDS             14288..15223
                     /locus_tag="RTF91_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HDZ4943154.1"
                     /translation="MIDFNKKPLFLAPMAGFSDLPFRNVVKKFGADITISEMISSNAL
                     VYESSKTLHMLERAELENPYIVQIAGGDKEVLKKAVQMLNEMDFVDGIDFNCGCPVNK
                     VVKQCAGSALLENLELFTSLVGVIKENNKKSLTSVKFRLGFNEKYPEKMTKICESLGV
                     DFVSIHGRTRKQLYSGKADYNSIAKAKASVKIPVIANGDINAQNAKEVYEITKCDGLM
                     IGRASVGNPWIFYEIKSGKSVDEKLKKEIILTHFDEMIKHYKDQGVGIFRKHLHEYSK
                     GRKDASAFRDEINRIENIQTMRKTIEEFFSRSVLL"
     gene            15364..15651
                     /locus_tag="RTF91_000219"
     CDS             15364..15651
                     /locus_tag="RTF91_000219"
                     /inference="COORDINATES: protein motif:HMM:NF015210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HDZ4943155.1"
                     /translation="MYSWDKDQCDQFWKDILKIGLDDKACPHFISSIVYIKDDVYHHS
                     SVKKLLIIDGQQRLITLTLLLIALRNITDNSINKDDCSEISHQSIHTNKIR"
     gene            complement(17755..17937)
                     /locus_tag="RTF91_000220"
     CDS             complement(17755..17937)
                     /locus_tag="RTF91_000220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943156.1"
                     /translation="MDFLNLALEFDSNNSACRILLMDEFFHQKQISRVEKYLEIIINE
                     RMEEFCETLLYCFKGV"
     gene            complement(18100..18489)
                     /locus_tag="RTF91_000221"
     CDS             complement(18100..18489)
                     /locus_tag="RTF91_000221"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943157.1"
                     /translation="MNYYIATKTHISDLNEQEYKEEFGKIFKRQAFKAPYKQMLLNAK
                     SLALKQRSFVAIHMRVGDVVEEFGFRRSIDPVFLKYIFPVDYVIYIIKHFIYKERVKV
                     ILFSSDKHAAKIISNFSTFAYFATFLG"
     gene            complement(18489..18647)
                     /locus_tag="RTF91_000222"
     CDS             complement(18489..18647)
                     /locus_tag="RTF91_000222"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943158.1"
                     /translation="MLEISPKELFEDDFLKEHDYSDVLPGRREGNTLCFKSLQELKTH
                     LKKLGGLG"
     gene            complement(18760..18948)
                     /locus_tag="RTF91_000223"
     CDS             complement(18760..18948)
                     /locus_tag="RTF91_000223"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943159.1"
                     /translation="MENRTQFISFKVNDESLDLKDKPKLLDDTFKIDLGGKINCHHFK
                     LESPDFFDLKCFKPRYKI"
     gene            complement(19068..19562)
                     /locus_tag="RTF91_000224"
     CDS             complement(19068..19562)
                     /locus_tag="RTF91_000224"
                     /inference="COORDINATES: protein motif:HMM:NF012744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDZ4943160.1"
                     /translation="MFINIARLSIEKDQTSLIEAFVAFHKKFPETKLLILGEGPLRSN
                     LEKLISRCRAKKYIFLLGFVSNPYNFLKRSDFFVLSSQHEGLPLVLAEAMILGKKILC
                     TDFACARDFLGTKNEYGLVVTRGSRGLLEGLEQIYTQDLNFKKFDAPSYNTWVKKEFE
                     EIFK"
     gene            complement(19730..20623)
                     /locus_tag="RTF91_000225"
     CDS             complement(19730..20623)
                     /locus_tag="RTF91_000225"
                     /inference="COORDINATES: protein motif:HMM:NF016357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDZ4943161.1"
                     /translation="MEQESLRICDANDREIDTNELLSIVDILITDYSSIAFDFMVLDK
                     PIIYYCYDYEEYKKERGMYFDLKDLGLEFCKDIEEIKALLGNESFLNKKNRFTHLKER
                     FFPLEDGKSAKRIIDFYFFDCYDETRLFKTQKNKIKLLFFAGAFMGNGITSAFKNLLA
                     NVDRQKYSFHLAIEQSGIEGFEERMHLFKEVQNKLKVLPKVSTAILSASEQALLIEKE
                     FFIQRSNEGQEKIFEKVFQREFKRLYGEAEFDYIIHYDGYNRYFAYLFAYAKTGAKKI
                     IYLHNDMQREFFIFIKDFTSS"
     gene            complement(20620..22221)
                     /locus_tag="RTF91_000226"
     CDS             complement(20620..22221)
                     /locus_tag="RTF91_000226"
                     /inference="COORDINATES: protein
                     motif:HMM:NF016357.1,HMM:NF019339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDZ4943162.1"
                     /translation="MCFYKEKNYTKSEEYFNKALSLEPMNVKFSFQAKEANSKNLSFI
                     KAGELHFKNIADLQEELKAKGESFALYFNLANNQALMNDFLKAAQSYQEAINLCNYEQ
                     ELSNLYYQMGFNYENCALEKNEKEYFNKTYKAYEMAIKYDKDLKSEKLGIGVFHETYQ
                     RWGFANRAYLKQSQYKQDDELFFKIGLSFDKLYDFKNAQIYYEKSLELNYQKPLTHFS
                     LGAAYERQENFIKAAFYYEEALKRESTFKADWYYRLGSVLEKAGETKKALKAFSYTQN
                     VLANDFSAQGFKALSNATFKKRAIYTYFYENLELKEKTILYESFHGRLMSCNPYAIFK
                     ALLKDERFKDFMHIWVISSADFVKDEFKSLKNLILVQRESYLYFKYLASAKYLINNTT
                     FPSYFIRKENQFYLNTWHGTALKTLGKYIQTTFMEHNNTQRNFLQTTHIINPNEFMQN
                     VLLKDYDIDEIYQGKALISGYARCDLTLGDFKEEQNFLKQKQDLRKHFGVKEGEKVLL
                     YAPTFRGYFGHSKFEYESITKLLSI"
     gene            complement(22399..23478)
                     /locus_tag="RTF91_000227"
     CDS             complement(22399..23478)
                     /locus_tag="RTF91_000227"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943163.1"
                     /translation="MTFKAKVKKSFHTNKGRIFLVRLLCVFIEFYFTDSKKALELIEK
                     YLQKTSKNIDAFYLKSEILSALGKNNEAFKLLEFCLLHSKRLKTWIELSKRVKTEKEM
                     IFLEALFEKYKNKAPFALKEEELLKSLSFGAMKVRDYDKVKGYLKQSLFLCIKKHKLP
                     LKSYKTRKITSKNFQEALWDLNSLLKAYDILMFLVSVTFLACVREKRFISYDKDIDVG
                     VFGENFKRIKELILNHQKFIIVDEVPNYLVINHINGVCIDIFVHYEKMGFYHNGHYQA
                     WKNTPFKLIEYEFFGKNYLAPENYELYLSENYGKDWREPKDFRHYNTLLDTPNSEIIN
                     SKMYVCFLYPLLMGEFALFNEEQIL"
     gene            complement(23468..23874)
                     /locus_tag="RTF91_000228"
                     /pseudo
     CDS             complement(23468..23874)
                     /locus_tag="RTF91_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874993.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
     gene            complement(24137..24547)
                     /gene="ybeY"
                     /locus_tag="RTF91_000229"
     CDS             complement(24137..24547)
                     /gene="ybeY"
                     /locus_tag="RTF91_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDZ4943164.1"
                     /translation="MILSNEKCEFLESIASFLSSKDVELIFVDNKEMQEINLEQRKQD
                     KTTDVLSFPLENIDEKLPLGSVVINVDLAKEKAKELGHSYEEEVSLLFIHAMLHLLGF
                     DHEVDNGEMREKEKELIEHFNLPKSLIIRTLEED"
     gene            complement(24544..25158)
                     /gene="recO"
                     /locus_tag="RTF91_000230"
     CDS             complement(24544..25158)
                     /gene="recO"
                     /locus_tag="RTF91_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecO"
                     /protein_id="HDZ4943165.1"
                     /translation="MQGFILHTQKVKDEDLIVYILSPKMLVKAYRFYGLRHSSILSGY
                     KIDFALEENPIFLPRLKDVLHLGFLWIMQRGKMLIWQEFIRLLYKHLKDVEELDNFYF
                     DLLKECVKRFEKQNPKRVIVDAYLKILEFEGRLHKEFICFACDEKIKNPITLLRAFLP
                     SHSQCALGFEFEEKKLREFYSSKNCAIFDDEEIENLYHLIKQGL"
     gene            complement(25158..25679)
                     /locus_tag="RTF91_000231"
     CDS             complement(25158..25679)
                     /locus_tag="RTF91_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HDZ4943166.1"
                     /translation="MKKAFVLVDYQNDFIDGSLGFDKALKIKDNILKALNQIDFNNTH
                     LLLTYDTHDEHYLQSKEGLNLPVKHCIKESLGWQMPKDFEPFLQKAHKIFHKNTFGSL
                     ELANFMQKSDYEEIHFAGIVSHICVFCNIILTFSAKPNARIVFHQNLSASFDEKLEIS
                     AFDLLRVYGIEIV"
     gene            complement(25684..26439)
                     /locus_tag="RTF91_000232"
     CDS             complement(25684..26439)
                     /locus_tag="RTF91_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine biosynthesis protein TtcA"
                     /protein_id="HDZ4943167.1"
                     /translation="MINLSKKLIRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALVHL
                     LNRMQAHAPFKFELEAVTLSYGMGEDYSHLHAHCEEHGIKHSVLDSNIYEVSGDTIRE
                     NSSFCSYFSRMRRGALYTYALEQGFNKLAIAHHLDDAAESFFMNFIHNGALRTLAPIY
                     QSKRGITVIRPLIFVRERQLRDNAVQNELSVIGNEFCPGMKLSEKNVKFPHAREEAKQ
                     LLANLEKDHPKLFTSLKTAFANLHTESFWLQKA"
     gene            complement(26436..27125)
                     /gene="pfs"
                     /locus_tag="RTF91_000233"
     CDS             complement(26436..27125)
                     /gene="pfs"
                     /locus_tag="RTF91_000233"
                     /EC_number="3.2.2.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxyfutalosine nucleosidase"
                     /protein_id="HDZ4943168.1"
                     /translation="MMKIAILGAMSEEITPLLETLKDYTKIEHANNTYYFANYKNHEL
                     ILAYSKIGKVNSTLSASVMIEKFGAQVLLFTGVAGAFNPELEIGDLLYATKLAQYDLD
                     ITAFGHPLGFVPGNEIFIKTDEKLNNLALEVAKELNIKLRAGIIATGDEFICDEAKKV
                     KIREIFNADACEMEGASVALVCNALKVPCFILRAMSDKAGEKAEFDFDEFVINSAKIS
                     ANFVLKMCEKL"
     gene            complement(27122..28042)
                     /gene="fabD"
                     /locus_tag="RTF91_000234"
     CDS             complement(27122..28042)
                     /gene="fabD"
                     /locus_tag="RTF91_000234"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDZ4943169.1"
                     /translation="MNAAFIFPGQGSQSLGMGKDFYENSIKAKELLQNASDFCKIDFK
                     HLLFEENEKLNQSQFTQPAIVLNSLMAYTVLLEKKPDLSSKFALGHSLGEFSALAVNG
                     AFDFLEALSLVNKRGLFMQEDCAKFEAGMMVVLGLDDEKVEELCQKAQKENKQIFAAN
                     YNCDAQIVVAGLKPDLASYESAFKEAGAKRAMLLNMSVASHCPLLENASAKLYMELEK
                     VLKPNFKAVLSNANTKIYTSKEEALELLKAQLISPVLYKQSIKACENEVDYFIEFGAS
                     VLKGLNKKITSKETYALTNMNDIDEFLKVI"
     gene            complement(28042..28581)
                     /locus_tag="RTF91_000235"
     CDS             complement(28042..28581)
                     /locus_tag="RTF91_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDZ4943170.1"
                     /translation="MAIEKNSVVSMFYELKDANTNEVLESNLYSQPISFILGKGQILE
                     SLEEEVMKLDCPSNADVVIKKEKGLGKYDENAVQTLPKEQFAGIDLKIGMELFGEGEN
                     GETVRVTVKEIGENDVTIDYNHPYAGRDLLFSLNIVDARAASEDEILTGIIAGSHSCG
                     SGHGHGHGGGCCGGGCGCR"
     gene            complement(28596..29525)
                     /locus_tag="RTF91_000236"
     CDS             complement(28596..29525)
                     /locus_tag="RTF91_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDZ4943171.1"
                     /translation="MKKIFTVALLGATLLYAESSAFGAGDITSDSSYGLTSNEKLFKE
                     KLDSLNNENIQINARINEIDERIEGLQSTLEGVNSQYAKSNSRLTQVEKSSQDIENNF
                     TSEIQKLKVYVEESRKIQEANNKQVKKVLAELSSLVDAINANYVSKNELNDANLSIKT
                     TPTIVAADVNNTIENNSTQDDKVKQIDESWKKKKNNEILELAIKDVDKNAFEDSKAKL
                     NFLITKQYKPARANFWLGEIEYKQKKYNNAIVYYKKSSSLSTKGDYFPKLLYHTAISL
                     DKTGDTKAANGFYKALKTNYPNSPEAKASPNRK"
     gene            complement(29529..30026)
                     /gene="pal"
                     /locus_tag="RTF91_000237"
     CDS             complement(29529..30026)
                     /gene="pal"
                     /locus_tag="RTF91_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HDZ4943172.1"
                     /translation="MKKILFTSIAALAVIISGCSTKSTSVSSDSSVDSNRGSGGRDGW
                     DIDSQISQLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVNITVEGNCDEW
                     GTDEYNQALGLKRAKAVKEALIAKGVNADRIAVKSYGETNPVCTEKTKACDAQNRRAE
                     FKLSR"
     gene            complement(30103..31311)
                     /gene="tolB"
                     /locus_tag="RTF91_000238"
     CDS             complement(30103..31311)
                     /gene="tolB"
                     /locus_tag="RTF91_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HDZ4943173.1"
                     /translation="MKKILAIFLVFLGTLWAEDPVIDIVNSGIVLPKIIVKDNSNLSD
                     ENLKKSFYNIIVNDLKVSSNFEVVANAAEESNYTFEYVLNKNGNTLSLNVKIKAGGSD
                     KSEQTYTLNGLEQYPFLAHKSVKASVNVLGLAPVDWMDHKILIARNSSSKKSQIIMTD
                     YTLTYQKIIVDGGLNLFPKWGNKEQTLFYYTAYDYDKPTLYRYDLNTNKASKVLSSGG
                     MVVASDVSADGSKLLVTMAPKDQPDVYLYDLNTKNLRQLTNYSGIDVNGNFIGSDDSK
                     VVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNNSAVSTYKDFLVYSSREPNQVGVFNI
                     YLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFPL
                     KVGKIQSIDW"
     gene            complement(31321..32100)
                     /locus_tag="RTF91_000239"
     CDS             complement(31321..32100)
                     /locus_tag="RTF91_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HDZ4943174.1"
                     /translation="MKNYGLSNLNSFLLALAIYISIIILVFFRLISEVEPAIQYTDIK
                     DSFVDIELAEPSKQLITQNNTLKEIQKPTEQVDIEKLFAQTTNKTVKTEDIDQKASNF
                     NELFGNIKEIQEEKTTKIQSSAKSGVSSAPKPQASELVKQLNDSLLQEESSMQGESTK
                     AQKIGIYDEFLGKVVRIITQRWTQYYPNSEKISVKVKIFIDENGKFGYTSVEKSGNPL
                     YDAKVAEFLESQKGKFITYPPQNKNISITMNLRDEAKVKID"
     gene            complement(32103..32492)
                     /locus_tag="RTF91_000240"
     CDS             complement(32103..32492)
                     /locus_tag="RTF91_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HDZ4943175.1"
                     /translation="MPFDDEKPELNITPLVDIMLVLLAILMVTAPSITYEEKINLPQG
                     SQKNTSAPTVKSLIISINAKKEIFLNQEKYDFISFADNLAQRKAQFNTEDPVFIRADK
                     SLKYDDVILVLRSVKNLGFNKVALQTE"
     gene            complement(32501..33055)
                     /locus_tag="RTF91_000241"
     CDS             complement(32501..33055)
                     /locus_tag="RTF91_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDZ4943176.1"
                     /translation="MNFEAIFHFFNSSSIITYIVLLWLSLYFILAFSILFAKLTYLAT
                     WKSKEKESLEILLLGEKDLSHTDSILRKCNDTTLNHLEIYKNLASRRASTGLTWLSII
                     ASTSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISEALVATGCGILVAIPAYTFHL
                     IIKRKAFELLSIIDSEIKVISSSK"
     gene            complement(33055..33444)
                     /locus_tag="RTF91_000242"
     CDS             complement(33055..33444)
                     /locus_tag="RTF91_000242"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDZ4943177.1"
                     /translation="MNDLINFEIVTPLGLIYQGEVKSVTFPGSEGEFGVLKGHAALVS
                     SLKSGVIDIEKADLNHELIAIDSGHVKVDEDKICVLAKGAVWVCGSNESEIEKNLAQA
                     KDLIKSMSSDNVALAATFSKLDNARMH"
     gene            complement(33449..34846)
                     /gene="atpD"
                     /locus_tag="RTF91_000243"
     CDS             complement(33449..34846)
                     /gene="atpD"
                     /locus_tag="RTF91_000243"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDZ4943178.1"
                     /translation="MQGFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLE
                     VAAHLGDNRVRTIAMDMTDGLVRGLKVEALGAPISVPVGEKVLGRIFNVTGDLIDEGE
                     EISFDKKWAIHRDPPAFEEQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTV
                     IIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGA
                     RNRIALTGLTMAEYFRDEMELDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLA
                     SEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGI
                     YPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSEEDKL
                     VVERARKIEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFYMV
                     GNIDEAIAKADKLKG"
     gene            complement(34871..35755)
                     /locus_tag="RTF91_000244"
     CDS             complement(34871..35755)
                     /locus_tag="RTF91_000244"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDZ4943179.1"
                     /translation="MSNLKEIKRKIKSVHNTQKTTNAMKLVSTAKLKKAEEAAKRSKI
                     YAQKIDEILSEISFQINKIVHNEDDTRLSLFHKKEQIKTVDLIFITADKGLCGGFNVK
                     TLKAVSEMLKEYKVKNINIRLRAIGKTGIEYFNFQKVELLEKYFHLSSSPDYEKACEV
                     IHTAVDDFLNGNTDEVILVHNGYKNMITQELKINHLIPVEPKSIEQTHNSLLELEPEG
                     TELLEDLMKTYFEYNMYYALIDSLAAEHSARMQAMDNATNNAKVRVKQLNLAYNKARQ
                     ESITTELIEIISGVESMK"
     gene            complement(35764..37269)
                     /gene="atpA"
                     /locus_tag="RTF91_000245"
     CDS             complement(35764..37269)
                     /gene="atpA"
                     /locus_tag="RTF91_000245"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDZ4943180.1"
                     /translation="MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL
                     KNIMAGEMVEFENGDKGMALNLEESNVGIVILGKEEGLKEGASVKRLKKLLKVPVGEA
                     LIGRVVNALGEPIDAKGVINTNEYRFVEEKAKGIMARKSVHEPLHTGIKAIDTLVPIG
                     RGQRELIIGDRQTGKTTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAM
                     EYSIVVNAGASDSAALQYLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLI
                     LRRPPGREAYPGDVFYLHSRLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNV
                     ISITDGQIFLETDLFNSGIRPAINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYREL
                     QAFAQFASDLDEASRKQLERGQRMVELLKQPPYSPLSVEKQVVLIFAGTKGFLDDIAV
                     SKIKEFEDGIYLFIESKHPDIFEQIRSKKALDSELEEKLAKAINEFKANHL"
     gene            complement(37283..>37607)
                     /locus_tag="RTF91_000246"
     CDS             complement(37283..>37607)
                     /locus_tag="RTF91_000246"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDZ4943181.1"
                     /translation="FQNFLRLLIENSRLKCIPQIVKELERQRAFKENIFVGIVYSKEN
                     LSQESLKDLETKLNKKFDANIKLNNKISQDNSVKIELEELGYKLSFSMKAFQNKLNEY
                     ILKII"
BASE COUNT        12684 a         6627 c         4925 g        13371 t
ORIGIN      
        1 aagctatttt ccatttaatt gcattcccaa aatctatttt ttctatagct tttaaattat
       61 tatcttgact tgcttgtatt atttgtatga ttttttcttt gatattatta aatgcttcat
      121 tttcattatt gccatattta gcaatccaag cataattttg actatataat ctaccgctag
      181 aagattcttt ctgactttca tcatttcttc tatatatacc aaatttaaaa gctgagccac
      241 cccaaatact tcctagatta tccaatttgc tttctatcca aaaagtaaaa tcatctctat
      301 ttggattatc ttttttaatg ttagtatatt cttcaagagt catattttta actttttcta
      361 aagtccatac ttcttgaaaa tttaaaaagc catcaagcat ttcttgtaat tttttttcat
      421 ctaaattcca cattacaaaa atccttaaat ttatgctatt tttaaatcat atttagattt
      481 cttaccactc cacaaaggtt ctagcttttt ttatatcatt aaaatttata gtagtttttt
      541 ctttattttc taaattttct aaagtgatat tttcatcatc tacagcaata atttttgctt
      601 cgaatttttc tttttcattg gttgtgatct tcacaagttc acctatactt tttacaaagt
      661 gttctatctt actaagtttt ctttcaagtc ctggtgaaga tacttctaaa aaatactctc
      721 catttacagg tgactctaca tcaaaaatag gcgataaaat ttcactaagc cttgcacaat
      781 catcaagatt taccccgcct tctttttgca cataaattct ataaattttt ctgccatttt
      841 cacttactag ctcatcatca taaaagctaa gttctgcttc tttgcaaagg gcttcaagat
      901 tcatttttat ccttttttat tttttcaaaa agtgcatcca tatggttttg atactcaagt
      961 ctatcatcaa atttaaaatg aaaattagga cacctatacc agccctgctc actcatgcag
     1021 taattttgca aagccttgct tgcttttttt aaagaagata aaattttttc ttgctcatga
     1081 atattaaaaa acattttatc aagatacaca aaagcatcgt atctaccctt tttacactcc
     1141 acatcaacca cacaaagatt tttcaaattt tcatcatcta aatttgccaa agcttcagga
     1201 atcagctctt ttaaaatact ttctgtgcgt agttttttaa tctcacttgg attcatagac
     1261 tcgcttgttc ctgcacttct ttatagcttt ctatataatc gcccactctc atatcatcac
     1321 acccttctat acctacgcca cattcatagc cttttgctac ttctttagcg tcatctttaa
     1381 agcgtttaag tgaacttaca ttaccttcat aaaccacgac tccatcacgg ataaggcgaa
     1441 ttttagcccc acggttaatc accccttcag ttaccataca acctgcaatt tgtccgattt
     1501 ttggcacatt gatcacttgc ctaatctctg cctgtcctaa ttgctcttca gaaataatcg
     1561 gactcatcat accaccaagc aaggctttta catcatctaa aagattataa atcacattat
     1621 aagttttaat ttccacgcct ttatctttgg cgcgctcttt aatctcacct gttgggcgta
     1681 tgttaaaacc tagcactata gagttttcac tcgcacttgc aagctctata tcactttgtg
     1741 tgattcctcc taccccactg tgtatgatat taactttaat ctcatcattt ctaagttttt
     1801 ctaaacttga ttttaaagcc tctaaagatc cttgcacatc agcttttaag ataacaggca
     1861 aggcttttag attgccttct ttaatcttcg ctccaagttc atcaatgctc actttagtag
     1921 atttgctaag ttctttttga cggttatatt cgtgtcgttt attagcgtat tctcttgctt
     1981 ctttatccgt ttttactgca attaaaatct ctcctgcatc tgctacttca ctaagcccta
     2041 caataacgcc acattcacct ggtttgattt cttttaaagc cttaccttga tcatcgctca
     2101 tcgcacgtac ttttccataa gcctcacccg caaccacagt gcttcctaca ctaagtgttc
     2161 cattttgcac gatgatagta gctaccgcac cgcgtccttt ttgaacagag ctttctataa
     2221 tgcttgcttt agcaaagctt tttggattgg ccttaagatc taaaatatca gcttgtaaaa
     2281 gcacgatttc aagcaaatct tcaattccca ttcctgtctt agccgaaact cctacaaact
     2341 cgtatgatcc gccccattct actggcatga tttccatttc tgcaagttga gtttttacca
     2401 tatcaggatt tgctgcttct ttatccattt tattgattgc aatgataata ggcacgcctg
     2461 ctgctttagc atgatttatc gcttctttag tttgtggttt tactccatca tctgcagcta
     2521 caacgatgat tacaatatca gtgatactcg caccccttgc acgcatagcc gtaaaagctt
     2581 catgacctgg agtatcgatg aaagtgattt tacgcccatt tttttgtacc atataagcgc
     2641 ccacatgctg agtaatccca cctgcttcgc cgcttacaac gcgtgatttt ctgatataat
     2701 caagcaaaga agttttacca tgatcaacat gccccatgat agtaataaca ggggctctag
     2761 ttactaaatc tttttcatca acttcttgtt cataatcttt tacataatca aactcatcag
     2821 cttcattaat gatattgatc tctatgccaa attcagccgc caaaatttca atcgcatctt
     2881 catccaaaaa atcatttttt gttgtcatca ttccaagcat aaaaagtttt gaaatcactt
     2941 cactagtgct ttttcctatc ttatctgcaa attcatacac acgaatttct ttagaaatag
     3001 aaacactact tacctcttct acttcttttt tttcaatctt cttaggtggt tttttacgac
     3061 ttcttctttg aattccacct tcaagtccaa aacccgcaga atttccaata gcttgtctta
     3121 taaaattagg ttgcttttta ttgatatttt gcggtctttc ttgctctttt acactaaaat
     3181 caggcaatac cacctcatct tcatcgtcta aagaaatgtc accaaaatca tgctcgtcta
     3241 aaaaattcat tttttcaatg ttttcttttt tactcgcaac aaaagctttc ttttcttttt
     3301 tctttttctt taaactctca tcagcatttg aaaacatggt ttttagactt aaacgttctt
     3361 cattattgat agatacatca tttgaatttt ttacttcttc ttttttaact tgaatttctt
     3421 cttcatcttt tttcttttta acaataacaa gcccgcgtct tttagctaaa gttgcactag
     3481 caaggctttg tggtttacga tcatctataa tttcttgttt ttcttgttct tttgcacttt
     3541 ctttttgagt ttttacttct tcttttataa tctcttgttt aagtttttct tcttttttag
     3601 attctttttt tccggattcg tttagctttt cttgttcttt tatattttct tttttaggct
     3661 tttttggggt tttgatattt ttcttaaaag cttctggaat ttctcttgtt tgtatatatt
     3721 cataaatagc tgctgcaatc tcaggttcta cagcatttga tgccattttg attctaagtc
     3781 ctaattcatt tgctttttca ataatttcct tactatcata acccaattct tttgcgattt
     3841 catgaattct aatctttgcc atttaaaaat atctccttaa gtccttgctg agtaattttg
     3901 gtgtttaaat ttttacatat tttagaaaat gctttttgta agattttatc ttctttttca
     3961 atacaatttt gacataaata tccacttctt ccatcttctg ctttaggtat gatatcccct
     4021 aaaactactt taaatctaaa taatgcattt tgttcaaagc gatttttaca cactatgcac
     4081 attctaattg gtatatgctt tttcaaaatt atatcttttt tttatatttt ttagcaaatt
     4141 tcaaagccat tatcatcaaa ttctaaatat tgcacacgaa aatctttaaa tttttcttgc
     4201 attttctttg ctaaagccaa agcattatct ttaaaagcta aagaaaaaaa acttgagcct
     4261 gagcctgaaa gagtactcat taaagcttga tttgctaaag caaatttttg tacttcaaaa
     4321 agttcaggta aatttttcat acgattgatt tcatgaaact tatcttgact tgcaaatttt
     4381 aaaaactcgt attttttctc caaaaaacaa gcggttaaaa atgaagcgtg agaaagatta
     4441 aaaaccgcat cgttaaaact taaatttttg gctaaagctt ggcgtgattg ttctgtactc
     4501 attgctaaat ttggtatcac aaccacagca gctaaatctt tatcaatctc ttttttaatg
     4561 ctataaattt tatttttttc aaccaaagag catacaaaac cgccaagcgt agctggagct
     4621 atattatctg gatgattttc gtagattaaa gcctcatcta aaatgcgttc tttttctact
     4681 ttaaatccgc tcatataata agcactagca atagctccaa caatcacagc tgaggaactt
     4741 cccaaccctc ttgataaagg gatattattt tgaaagataa agcgaaaatt atctcttttt
     4801 ccacttagtt tttcataaat ttcataaaaa atatttacaa atatattatt ttttttaagg
     4861 aaaatattat cactaccctc acctttaatg ctaatgctaa aaacacaaga tttttggatt
     4921 tgagtttcat taaaaagctt taaactaagt cctaaacaat caaaacctgg ccctaaattc
     4981 gcactcgtag cgggaactaa aattttcaaa cttcatccta aattacatct aaaaaataaa
     5041 agggaagatt atcattattt agtttaagct cttgtaaatt ttttggtaaa aaaaactttg
     5101 ctggagtatt ttgctctaaa caaatttcac cctctttata tacaaaacaa aaatttttat
     5161 ttgcacttat gggcttatag tcatttaatt caaaagcact cactgcaaac aaaggaatat
     5221 cttttactat acttaaagtt cttaaactta cataagaaat tttaattccc atataagaac
     5281 ctgggccatt agtgtaaatt aaacttgtaa aatcatattg ttttaacaat ttatctaaaa
     5341 tttttggtaa aaactcactt gctttttctt cactttcgta agtttttaca agtttatcat
     5401 cttgataaat tccgatcatt aaaggcttag acaaggcatt aagcaaaaga gatgttttta
     5461 tacaaatacc ttttcataag ctttttgggt tgttttttca aggcttacaa tttcgtaagc
     5521 atctttatct tttaaaactt ctttagtaag caaatgattt aaatggtgac ttccagcata
     5581 tgaagtataa tccccaaaaa cacggtatcc aagtaaggtt aaatccccaa ttgcatctaa
     5641 aattttatgc cttacaaact catctttaaa acgtaaacct tcaggattta aaatacgatt
     5701 ttcatctacc actatagtat tttccaaact tccgcctagt gctaaattca tactcctaag
     5761 agcttgaaca tcttttaaaa aaccaaaagt tctagctctt gctatgtttt ctatataatt
     5821 ttttttactg aattcaaaat tataactttg ttcacctata acagcattat caaatttaat
     5881 tgtataatta atacgaggtt ctttagtagg agttaaacgc acaaatttat tgccatctct
     5941 tacttctata gactttttaa ttaccatgat ttttttaggt gcgtcaagtt ctttcactcc
     6001 tgcttcatca agcatcatgc aaaaactaat acttgaacca tccataacag gagcttcatt
     6061 tgcatttaaa actatacgca cattatcaat cccataagca ttgatcgcac tcattaaatg
     6121 ctctattgta gaaataaatc cacgatcatc tcctaaaaca gttgccattt gagtattgat
     6181 tacattttca gggcttgctt tgtaacttac attaagatca cttctaaaaa atactatacc
     6241 actatctgct tctaaaggct ctaaagtaat ttctataggc tcacccttat gaagtcctat
     6301 acctacacct ttgacagttt ttgctaaagt taattgtttc attaattttt tcctaaaata
     6361 atttttttac catgatttaa aacattgtaa atattattct ctatccatct tttatcttgc
     6421 cattgttcag gacgggtttc aacaccttga actaaaactc caaaatgcaa atgatcacct
     6481 aaagctaagc cacttgttcc tgttctacct ataatacttt gtttatcaat cacttcatct
     6541 aaatcaacat ttttaaaaga acaatgccca taaagactat aaacaccaaa accatggtaa
     6601 ataattaaat ttaaaccata aatcccattt tcagcagcaa aaacaacttt gcctgagtta
     6661 ttacttacaa taggggcttg cgctacgctt gctaaatcaa tccccatatg ataagaatca
     6721 ctgacaaatt gcccattata agaataatac ctatgatcag caaaatctgc taccttcata
     6781 ccatttttaa gaggtaaaaa taagtttaaa ccaaaattat caattttttc ctcaggtact
     6841 tttgaagtga tttcatggat aagctcttca ttgttatttc ttaaggtttc attgacaaat
     6901 ttaaattttt cataacgatt gaagttgtta tcttttgggg catatcgact ggctagattt
     6961 ttaatctttc catctaaaaa tttatccgta agattaatat ttgaaacgcg atatttacga
     7021 ttaacagaat gataccttat acgctctttt gaaatattgc ccgctttatc tgtagcaaca
     7081 acaaacgcgc gaaattcctc atctcttgca tcccaagcaa tcaaagctgc ataataaccc
     7141 tctttcacat aaggcgtagc tttaaaaatt ttgcctttat ttgtttttat ataaacctta
     7201 tctaaattag catcatcagc tttaaaaaca acagctgcag caccaccttg ttcaatttga
     7261 taagaattgc ttatgatatt aatttttgga gccgtattgt ctatcaatac tgcaatttgt
     7321 tttcttgctt tattgccgct aaaaaaattc caaaggctag aatctttagc tattacttcc
     7381 aaaacaaaag attttacatt ttctttataa gcaaattttg gcaaagtaac ttgtaaagta
     7441 atatctttta aattagaaat cttttcatct gttataacca ttgcactagt attgtcatct
     7501 ttgtgcaaca taatttgcac atttttaata gaacttttat cacctttaac atgcactaaa
     7561 ataggtttct taagatcagt atatacaaca tcaggaatta aaatttgagg agaacttttt
     7621 tcaaaaatac ttaatcttga aataaaaaaa atcaaaattg ctattaaaac taaaattaaa
     7681 acagataaat aagttttgtc ttttcttttt ggcataacct taccttaaca attctcaatg
     7741 cttttgttgt ctttggtatc aattttatta tatttttagt aaatatctag taaatttata
     7801 aaatttctct tagagtatta gcctgtttca tccattctct taattcatca tttttatcta
     7861 gttgtatcat ttgtttacat cgctctaatt cttgttgaaa aaaatcaata gagtttaata
     7921 aattatcttt attttgcaaa aaaatacttt cccacatttg tggcgatgat tttgcgattc
     7981 tactcatacc cttaaacgat cctcctgcta aatgaacaat atttctttta tcttcttctt
     8041 tcattacaaa attagccaaa gaaaaactaa taacatgagg caaatgtgaa ataatagcag
     8101 catggtgatc atgagcttta ctatccataa aaacaatttt catgcctaaa tgagaaaaaa
     8161 tttccaccgc tcttttttga tgcaaatcat cagctatttc gctatcacaa agtacacaaa
     8221 cagcatcttt ataaagctcc ttaaaagctg cttttggacc cgaattttca gttcctgtca
     8281 tagggtgagc aaaaagagtt tgtttgatta aattcctagg caaactttct ataatttttc
     8341 tttttgtact tccaagttct ataattgtta cattagaagg taagtcagct aatttttgta
     8401 aaatttctat gataacatta acaggagttg caataaaaat tatatcacac aaagctaaat
     8461 ctttaaattc tataagctcg tgaataagac ctagttttaa ggcatctttt tcattttctt
     8521 tacttaaatc cataccataa acacaagaaa taagcttatt ttcttttaaa taaagtccca
     8581 aagacccgcc cataagtcca agccctataa ttgctatttt catacttttt gccttagttt
     8641 ttttgttaaa ttttttttgc tattatacag cttttaataa agctttaggt aaaaatcaat
     8701 gaaaaaatat tttattagta tttgtgcttt agttgctatg gctaatgcag taaccattaa
     8761 ggatattaaa tttatcggtt taaatcattt atcaaatgca agcgccataa atatcacagg
     8821 acttaaaata ggtgaggaaa taaatcccgc aaaaatcaac actgctgttc ttaatcttta
     8881 taaacaaaat tattttgaaa atatcgcagt agagaataac aatggagttt tagaaatcat
     8941 agttactgaa aaaccaatca tagcaaaggt tagtataaca ggtatagctt caaacgatag
     9001 aaaacaagtt gaaagtattt taggcattaa aagaggaaca ttacttgatg aaggaagtat
     9061 aaaagaagct attgagcgta ttaaagccta ctatgaagca aaaagttatt ttgatactat
     9121 cgtagaatac aaaaaaaaga ccctagaaaa taccgatgga ttagaacttg aatttatagt
     9181 aaatcgtggt gaaaatatca ttattgataa tgtttattta agtggagcta agaaattttc
     9241 atattctgat atagaacctg ctgttgttaa caaagaaaaa gaattcatgg gctggatgtg
     9301 gggacgcaac gacggaaaat taaaagtttt tgaacttagc aatgatagct caagaattgc
     9361 tgatgagtat atgaaaaaag gatatttgga tattcaagta tcttctcctt atcttaaaac
     9421 ctacacagac acttatcaag caaatttaac ttattttatc aaagagggaa agccttataa
     9481 aattaaaagc ataagcatag aaaatccttt atttaacgac aagcaaaatg cacaaacagt
     9541 aaaagatctg caatcaagtg ctggcaaaac catcaatata gaagacatta gaaaagatgt
     9601 taaaaccatt gaaacacaaa gtgctgattt aggttatgca tttgtagaag tctatcctga
     9661 tattcaaaaa aatgatcaaa ctcaagaagc tactgttgta tttaaagtaa ttcctcatga
     9721 taaagtttat ataagaaatg ttatcatttc gggaaattca cgcactgtag atcgtgtaat
     9781 acgccgagaa ttatatataa cagaaggtaa tttatacaat agaacagact taagcgagtc
     9841 aaaaaatgct ttaaaaagaa cttcttattt tgatgatgta aacatcaaag aagaaaaagt
     9901 tgatgataca catattgatt taattgttga tgttaaagaa gcttcaacag gtgctatttc
     9961 tggaggtatt ggctatggat caagtgatgg tattttgctt aatgcttcat tatcagacac
    10021 aaacatcttt ggctcaggaa taaaaagttc tgtaagtgta gataaaagcg atgatacttt
    10081 atcaggaaga atcagcctta taaatccgcg cgtttttgat agtcaatata gtttaggcgg
    10141 aacgctttat tcaaatgatt atgaatggga taattattca gaaaaaaatt atggctttga
    10201 tataacagtt ggacgccaat ttgcaagata ttacaatgta agcttaactt ataatcttga
    10261 acaaagcgat atttatcact taagcccaac actcttaaga acaggatatg aacttggaaa
    10321 aagcattaaa agctctgtaa ctccagcaat cacctttaac aatacagatg attattatct
    10381 accgcgatca ggtatcattg cctcaactag tttagaatac gctggacttg gcggagatca
    10441 agaatttatt tcctcaagct ccaaatttaa cttttatcaa ggcttacaaa actatatagg
    10501 atatgatctt atttatcgct ataaagcaag tttttataaa gtatgggatg aaggctattt
    10561 accaattaac caaagaatct atttaggtgg cattagatca atacgcggtt ttgaaagcag
    10621 aacagtaagt cctaaaaacc aatggggtga tgaagtggga ggaactatag cttttgccaa
    10681 ttctgtagaa cttagcttcc ctttgattga tagaatcaaa cttcgcggta gtgtattttt
    10741 tgattatggt atgataggac gcaaaaattt agatgaaata aaaagaatga gtacaggtat
    10801 aggcattgaa tggattacac ctattggacc tttacaactt gtatttgcta aacctctcaa
    10861 tgataaaaaa ggcgatgata ctaatagttt cgaatttaac cttggaacac gcttttaatg
    10921 aaagaatttt tagatgcttg cttaaatgca aatttgcaaa tacgtaagta tctaaacaat
    10981 attccacaaa acgatcttaa actttgttca agattaggtt ataatgaaaa tcaaggctat
    11041 gagcttgact taaaatgtga acaaattttc ataaaatatc ttagttgctt cgggcaaatt
    11101 ttttctgaag aaagtggttt gatcggagaa actagctcaa gacaaatgat tcttgatcct
    11161 ttagatggaa gttcaaattt tgtttctaaa ataccttttt atggtacttc tatagcactt
    11221 atggaagaag atcaagcaaa aagtgctttt atttgcaatc ttgtcagtca agaaattttt
    11281 gcttttagcg acaatcaagc tttcaaatcc aatctttcta atccaaaata ctctccttta
    11341 acatctaatc tattttctac aataggtata gttgaaaaaa tttcacttcg tccagaactt
    11401 cttggttttt taacaaaaaa tcaattaaaa tttcgttctt taggtgcaac agccttaagt
    11461 cttgcttata cttcgtattt tagttttgta ttaattcttg gagaaacacg aatttttgat
    11521 acagcaggag ctttgataat tcatcaaaat ttatatatag aaaaaaatga aaatttcctt
    11581 ctcctaagcc aagacaagaa aatttttgat ataatcttag aatttttaaa aaataatagg
    11641 tgaatatatg aattttgcag atattttttc aaaaataaga agacaacagc ctagtacaaa
    11701 agaagcacca aatcattggg ttaaatgcca aaattgtcat gctttgatgt attataaaga
    11761 aatagaatct tgttttaatg tttgtccaaa atgtaattat cacatgagaa tttcagccaa
    11821 tgaacgcatt aaacttttaa gcgatgaagg cagttttgtt gagtataacg caaatttaga
    11881 agccatcgat cctttaaaat ttgtcgatag caagtcctat aaaaaacgtc ttagtgaagg
    11941 tgaaagcaaa acaggtagaa aaagctctgt tatcagcgga gaatgtgaaa tcaatggcct
    12001 aaaaacccaa cttgttgtat ttgatttttc ttttatgggc ggatctttag gttctgtcga
    12061 aggagaaaaa attgttaggg ctatacaaag agctatcact agcaaaactc ctcttgtaat
    12121 cgtaagtgca agcggcgggg ctagaatgca agagagtact tattctttaa tgcaaatgag
    12181 caaaactagt gccgcactta aacttcttag taaagaaaaa ctcccctata ttagcatttt
    12241 aactgatcct accatgggcg gagtgagtgc ttcttttgct tggcttgggg atttaatcat
    12301 cgccgaacct gaagccttag taggttttgc tggtgcaaga gttatcaaac aaaccatagg
    12361 agcagattta cctgaaggtt ttcaaaaagc agaattctta ttagaacatg gacttataga
    12421 tgccatagtt gaaagagggg aacaaaaaca atatcttagt gatgtgctaa aattttttaa
    12481 tggaaaataa tttgcaagtt aatatctttt acattcaaaa gagtgatgaa tttaaagctt
    12541 ggagcgaaaa gtactccaaa cttatctcta aatacgccac tttaaaagaa ataaatgttt
    12601 ttaataaaaa aatcgcctta gctcaaaatt taagtgccat agaagcaaaa aaaagctatg
    12661 aagaagcttt tatgccttat aaaaaaggct attgtatcgc tcttgatgaa agaggaaaag
    12721 atcttacgag catagaattt gcgaaactta tccaagataa aaatgaatta agttttttta
    12781 taggcggcgc ttatggttta agagaagaat ttaatcaaaa tttggatttt agactatcat
    12841 taagcaaact tactctagca catcaatttg ttaaaacctt gcttttagaa caaatttatc
    12901 gtgcattttg tatcaataac aatcatcctt atcacaaata gaaagtttta aaatgaaaaa
    12961 aaatgaaata caaaatttca aaaatatttt agaagaaaga aaaaaagcca tcttagagaa
    13021 tttacaaagt aactcaaatg aaatcgaagc tcttcacaat agcgttccaa gtgatagtgt
    13081 ggatttttct gttatagaaa caggttctca gattgacttt gctatcagta caaatctcaa
    13141 aaaagaactt atagaaatcg aagattcttt agataaaatc aaaaatggca cttatggaat
    13201 ttgcgaatcc tgtgatgatg aaatcgactt tcaaagacta aaagtcaaac ctcatgcaag
    13261 atattgcatc acttgccgtc aaattgcaga acaaggaaaa aaacatgaaa attaaactct
    13321 tcttactcgc aagctttatt tatatagcac ttatttttac ctttgcttgg catttagagc
    13381 taggaaacta cactctcaat atcagcactt acacctttga acttcctatt atgatatggc
    13441 ttgttattcc tttgtttgtt tatatgattt tagctgtttt acacatagca ttttacgggt
    13501 ttttacgtta tttaaaattt aaacattttt tcaaagatgc ggccaaattt gaatcttata
    13561 ctcaagattt gctccttgaa aaagatctta aaactgcttt tcaaactaaa gaatttagag
    13621 ctgtagctca actttttaaa accgtaaaaa cacatgaaaa aattccacat tcacacaaaa
    13681 tcaacgaaat tttagatctc attgatggtt taaataaaaa cgaatttttt aaccttagta
    13741 aatttaaact tgaaaataac aatactttgt atttgcaaaa tgaaaaaaat catcttaaaa
    13801 atgatgcaaa ttatgcttat actaaagtta aaaatctcaa cgaaatcaaa gatgaatttg
    13861 aagaaattgc ttttagcacc ctcatagaaa aaggcaatta tgagcaaatt aaaaatgtaa
    13921 aaatccctaa aaaaccttgt caagttctta cacttatcaa gcgttttaaa gaaggaaatt
    13981 tagaacttag tatagcagaa tacgaagtct tactttcgca taacatattg aacgaaaaaa
    14041 actatcttga tgcagcaaaa ctaagcacca agcttttaaa tcctgatgct attatcggaa
    14101 tttttaataa aataaaaaat gaaaaaagtg aggctttaaa ggcgtattta tatcttttgg
    14161 ctgaatttgg acttttggat gaattaagag agcaaattca caatgatgat aagaaattta
    14221 atgattttaa agccttttta accttgcgtg aaaaaaatat caaaatcgat ttaaatcaac
    14281 ttatacaatg atagatttta ataaaaaacc tttattttta gctcctatgg caggtttttc
    14341 agatctgcct tttcgcaatg tggtaaaaaa atttggtgct gatatcacca taagtgaaat
    14401 gataagttct aatgccttag tttatgagag ttctaaaact ttacatatgc tagaaagagc
    14461 cgagcttgaa aatccttaca tagtgcaaat tgcaggcgga gataaagaag tgttaaaaaa
    14521 agcagtacaa atgttaaatg agatggattt tgttgatggg atcgatttta actgcggttg
    14581 ccctgtaaat aaagttgtta aacaatgtgc tggcagtgct ttgctagaaa atttagaact
    14641 ttttacaagc cttgtaggag tgattaaaga aaacaataaa aaaagtctta caagtgtgaa
    14701 atttcgctta ggatttaatg aaaaatatcc cgaaaaaatg actaaaattt gcgaaagttt
    14761 aggcgtagat tttgtaagca ttcatggacg cacaagaaag caactttata gcggaaaggc
    14821 tgattataat tctattgcca aagctaaagc aagtgttaaa attcctgtta tcgcaaacgg
    14881 tgatattaac gcacaaaatg ctaaagaagt ttatgagatc acaaaatgtg atggactcat
    14941 gatagggcgt gcgagcgtgg gaaatccttg gatattttat gaaatcaaaa gtggcaaaag
    15001 tgtggatgaa aaactcaaaa aagaaatcat actcactcat tttgatgaaa tgataaaaca
    15061 ttataaagat caaggagtag gtatttttcg caagcattta cacgaatatt ctaaaggacg
    15121 caaagatgct tcagccttta gagacgaaat caatcgcata gaaaatatcc aaacaatgag
    15181 aaaaactata gaggaatttt tttcaaggtc tgttttactt taaaaaacta ttacactttt
    15241 taagctttaa tttgccttgc atttttttga taagctaagt tttaaaaaat ggaaggtaag
    15301 aagtagctca aattttagaa tttatgagaa ttacaaaaca caaatttatt atccctatca
    15361 agaatatata gctgggataa agatcaatgt gatcaatttt ggaaagacat tttaaaaata
    15421 ggcttagatg ataaagcttg tccacacttt ataagctcta ttgtgtatat taaagatgat
    15481 gtttatcatc acagctcggt taaaaaactg cttataatcg acggacaaca aagacttata
    15541 acgcttactt tacttttaat cgccctaaga aatattacgg ataattctat taacaaagat
    15601 gattgcagtg aaatatctca tcaatcaata cacacaaaca aaataagata aatatactta
    15661 cagaaaacga taaggatagt ttaatctctt taattgacaa aaatacaagc acctcataag
    15721 atttttctac aagaatacaa aaaaattatc attttttctt agaaaaatta aaaaatacag
    15781 atttaaaatg cgcttgcaaa gggcttaata aacttttatt tgttgatatt atagcctaga
    15841 aaaggaaaag aatgatcctc agcttaccag agtatgaact ccacaagtaa aaagcttact
    15901 caaagtgatt taatacgcaa ttatatctta atggacttag agcctcacat aaaaaatgag
    15961 ggcaaaatcc caaatataaa caatatttac aagaaattta aaactattaa ccactggatt
    16021 cacagattta gaaaaatata gcaagcttta ttgtgctata gcttttaaaa aagaagagga
    16081 taaagagttt ttatgatttt taaaagctag aggctgaagt aacttatctt ttttattaaa
    16141 aatatatgat gattacaagc aagaaaaact taacaaacaa gatctcattg ctatttttca
    16201 aaccttaatt tcttttatct ttagaagagt agtttgtgag gtaggcacag gttcttaaat
    16261 aaatttattt gccatacttt ttaaagatat aaaagaagaa gaatttacaa agtattcaag
    16321 cttctttata tgtcttaagg aacacttccg gatttcctaa tgatgaggag tttaaagaaa
    16381 aaatagatat caataactac accatcgagc aatattatgc ctcaaaatat cacaaattct
    16441 aaaacgtagt aagaaatgtt tgggcaagat tatgaagaaa ttcacgaaaa atactgtcac
    16501 accttaggca atctcacgct tataggatac aatagagtat tctaataaac cctttaaaga
    16561 aagtcctatt cgcctcaata ttttcttaaa agacttagaa acatttagcg aaaaagagat
    16621 taaagaaaga gtaaacaaac ttacctcttt agtcttgcaa atttggagtt atctaaagct
    16681 agataaagaa gttttagcaa aatacaaaaa agttaaagca agatcaaagt aaaaaatatc
    16741 acctataatt tagatgattt tagctactta aaaaggctgg gttcaagagc tttgtttgaa
    16801 tcttttaagg gctgaaatta gcacttgatg aggacattag cgaggatatt ttaagcttta
    16861 tatctctaag tttaataccg ctttacagag attatccctt taacaaattc tttaaaaata
    16921 agcttaaata tttatttaga caaactagaa gaaccaagaa aaatggtaga gatatattaa
    16981 atattggcgg aataaacaga aattatccta aaaaatgctt tttatttata tgatagcctt
    17041 tgaaaaattt ttcattatct acaaaggctt atcttgcgaa tcaagcttaa gcaaaagcac
    17101 ttctatctct tgctttacac tgtcttgatt taaaatatcc agtttatcgc gtgtgatttt
    17161 cacaaaaatc gcatactatt ttttgttttt tgcttgaagc ttttttgctt taaattcttt
    17221 tttcaaacta agcacatcgc gaaagaaaaa tcggacaaag cccccccccc attttgtttt
    17281 ataagcttta ttaaagcaga tactaattta cagcttaaat gttcttttat ttttaaactt
    17341 tctttaaagt ctggcaagct ctcaagtggc aggggtttta aagccagatt tttagcataa
    17401 ttttctttaa agctttgctc ttctttttta taatctaagg atttttatat agcccaaaag
    17461 gctttttgag ttttgtatca tacaagagcc gagcctatat gagagatgat tttgaattct
    17521 ttggattgcg gtaagggttt gcccagattg tgttaggggc tggtctttta ataaagaagc
    17581 ataaaaaatt ttaaacaagt cattattggg ttgttttttt aaagccattt gacaaaaaag
    17641 caaggcttga aaaatgtttt tattatacag gctgatttta cttgcgacaa agcttatata
    17701 aggataatct ttatttgcaa aacgcaaata aagctcaaat tgagttttgt aagattacac
    17761 gcctttaaaa caatacaaca aagtctcaca aaactcttcc attctttcat tgatgataat
    17821 ttcaagatat ttttctactc tagaaatttg tttttgatga aaaaactcat ccataagcaa
    17881 gatcctacaa gctgagttat tgctgtcaaa ttctaaagct aggtttaaaa aatccattct
    17941 ttgcttagca gaggtttttt tagctaaatg ataagaataa atgcaagtgg cgtatttttt
    18001 tacatttctt acattaattc tatccttaga tgaaactaaa agacaagaat ttaaaagctc
    18061 ttttggctca aaaagtctgt tataattgat aaattgtgtc tatcctaaaa aggtggcaaa
    18121 ataagcaaaa gtagaaaaat tgcttatgat ttttgcagca tgcttatcgc ttgaaaaaag
    18181 tatgacttta accctttcct tgtaaataaa atgcttgatg atataaatca cataatctac
    18241 aggaaaaatg tattttaaaa acaccggatc aatagatctt ctaaaaccaa actcttctac
    18301 cacatcccct actctcatgt gaatagctac aaaagagcgt tgttttaaag caagtgattt
    18361 agcatttaaa agcatttgtt tgtatggagc tttaaaagct tgccttttaa agattttgcc
    18421 aaattcttct ttgtattctt gctcgtttaa gtcgctaata tgagtttttg tagcgatata
    18481 ataattcatc acccaagacc cccaagcttt tttagatggg ttttaagctc ttgaaggctt
    18541 ttaaaacaaa gcgtatttcc ctctctccta cccggaagaa catcagagta atcatgttct
    18601 tttaaaaaat catcttcaaa aagctcttta ggtgaaattt ctagcaaatg ggggatttta
    18661 ctccaaacaa aaccgaattt aaagcctatt ttttagcaaa ataaattgtg cttacaaaag
    18721 cactcatcct cgaaccaaat gcatcagccc ttcctgcaat taaatcttgt atcggggttt
    18781 aaagcactta agatcaaaaa aatctgggct ttcaagctta aaatgatggc aatttatttt
    18841 acctcctaaa tcgattttaa aagtatcatc taaaagcttt ggtttatctt ttaaatcaag
    18901 gctttcatcg ttgactttaa agcttataaa ctgcgttcta ttttccattg acttgcatta
    18961 aaaaagggct tttaaattcg atgtattcta gataacaagc ttctttaaaa tataaagctc
    19021 atcttttttt atcgttggta tttgcattaa atcttgcatt ttataaatca tttaaatatt
    19081 tcctcaaatt cttttttaac ccatgtatta taagaagggg catcaaattt tttaaagttt
    19141 aaatcttggg tataaatttg ttctaacccc tctaaaagcc cgcgactgcc ccgcgttact
    19201 acaagtccgt attcgttttt tgtacctaaa aaatcccttg cacaagcaaa atcagtacaa
    19261 agtatttttt tacccagtat cattgcttca gccaacacga ggggcaatcc ctcgtgttgg
    19321 cttgaaagca cgaaaaagtc acttctttta aggaaattat aaggattaga aacaaaaccg
    19381 agcaaaaaaa tatatttttt tgctcgacac ctcgagataa gtttttctaa attcgacctt
    19441 aaaggaccct cacctaaaat caaaagctta gtttctggga attttttatg aaaagccaca
    19501 aaagcttcga ttaaactggt ctgatccttt tctatactaa gtcttgcgat attaataaac
    19561 actttatcct tttggaaaaa tttttcatat tttttatcta aagcaaggtt tgatttagat
    19621 aaaacctctt tttcattgat gaaattatgc aaggggtaaa atttatccct accaatgcca
    19681 taaactggag caagttttaa attctcttca ttggtttgtt ttgaaacgct taagagcttg
    19741 taaaatcttt tataaagata aaaaattccc tttgcatgtc attatgcaaa taaatgattt
    19801 ttttagcccc cgttttagca taggcaaaaa gataagcaaa gtatctatta tacccatcat
    19861 aatggatgat ataatcaaac tcagcctctc cgtaaagtct tttaaattcc ctttgaaaaa
    19921 ctttttcaaa gattttttct tgtccttcat tgcttctttg gataaaaaat tctttctcta
    19981 taagcaaagc ttgctcacta gcacttaaaa tagccgttga gacctttggc aaaactttaa
    20041 gtttgttttg cacctcttta aaaagatgca ttctctcctc gaaaccctca atgccacttt
    20101 gctctatggc taaatgaaaa ctgtattttt gcctatcaac atttgcaagc aaatttttaa
    20161 aagctgaggt aatgccattt cccataaaag caccagcaaa aaataaaagc ttaattttat
    20221 ttttttgtgt cttaaaaagc cttgtttcat cataacagtc aaagaaataa aaatcaataa
    20281 ttctttttgc gcttttgcca tcttcaagcg ggaaaaatct ctccttaaga tgggtaaagc
    20341 ggtttttttt gtttaaaaag ctctcatttc ctaaaagggc tttaatctcc tctatatcct
    20401 tgcaaaactc aagtcctaaa tccttaagat caaaatacat tcctctttct tttttatact
    20461 cttcataatc ataacaataa taaattatag gcttatccaa aaccataaaa tcaaaagcga
    20521 tagagctata gtcggtgatt aaaatatcta ctatacttaa aagctcattg gtatcaattt
    20581 ctctatcatt agcatcgcat atccttaaac tctcctgttc tatatactta agagtttcgt
    20641 gatgctttcg tactcaaact tagaatgacc aaaataacct ctaaaagtag gagcatataa
    20701 aagcactttc tcaccctctt tcacgccaaa atgctttctt aaatcctgct tttgttttaa
    20761 aaagttttgc tcttctttaa aatcacctaa ggttaaatca caccttgcat aaccacttat
    20821 caaagctttt ccttgataaa tctcatcaat gtcataatct tttaacaaga cattttgcat
    20881 aaattcattt ggatttataa tatgcgtggt ttgtaagaaa tttctttgtg tgttattgtg
    20941 ctccataaaa gttgtttgaa tgtatttacc taaggttttt aaagccgttc cgtgccaagt
    21001 gtttagataa aactgatttt ccttgcgtat aaaataactt ggaaaggtgg tgttgttaat
    21061 aaggtatttt gcacttgcta ggtatttaaa ataaagataa ctttcccttt gcactaaaat
    21121 aagattttta agacttttaa actcatcttt aacaaaatcc gcacttgata ttacccaaat
    21181 atgcataaaa tctttaaatc tttcatcttt taataaagct ttaaaaatcg cataaggatt
    21241 gcagctcata agccttccgt gaaagctttc ataaagtatg gttttttctt taagctctaa
    21301 attctcataa aaataagtat aaatggctct ttttttaaaa gtagcattac ttaaggcttt
    21361 aaaaccctgg gcactaaaat catttgctaa aacattttgc gtgtaagaaa aagcttttaa
    21421 agcttttttt gtttcacctg ctttttctaa aacacttcca agtcggtaat accaatcggc
    21481 tttaaaagta ctttctcttt ttaaagcctc ttcatagtaa aatgcagctt ttataaaatt
    21541 ttcttgcctt tcataagcag cacctaaact aaaatgcgtc aaaggttttt gatagtttag
    21601 ctctaaagac ttttcatagt aaatttgcgc atttttaaaa tcataaagct tatcaaaact
    21661 taatccgatc ttaaaaaata gctcatcatc ttgtttgtat tggctttgtt taagataagc
    21721 acgattagca aaaccccatc tttgatatgt ttcatgaaaa actcctatac ctagtttttc
    21781 actttttaaa tccttatcgt atttaatagc catttcataa gctttatagg ttttgttaaa
    21841 atactctttt tcattttttt ctaaggcaca attttcataa ttaaaaccca tttgatagta
    21901 aagattgctt agctcttgct cgtaattaca gagattaatc gcttcttgat aagattgtgc
    21961 tgcttttaaa aaatcattca tcaaggcttg attgttagct aaattaaaat acaaagcaaa
    22021 actttcgcct tttgccttta actcctcttg caaatcagcg atatttttaa aatgaagttc
    22081 ccctgcttta ataaaactta aattcttaga attcgcttct ttagcttgaa aagaaaattt
    22141 cacattcata ggctctaaac ttaaggcttt gttaaaatac tcctcactct tagtgtagtt
    22201 tttttccttg taaaaacaca ttcccatttt aaagaaattt tttgcgtgtt ttggatttaa
    22261 aaaacttgct ttttcataga atttaaaggc tttttatagt ctttatcaag atgataaaac
    22321 ctcatagccc aaccataaaa aagataaaaa attaaacttt tcatgactta ttttcctttt
    22381 taaaacttaa atactcgctt acaaaatctg ctcttcatta aaaagggcaa attcacccat
    22441 taaaagtgga tataaaaaac aaacatacat tttagaattt ataatttctg aattaggagt
    22501 atcaagcaaa gtattataat gtctaaaatc cttaggctct ctccaatcct tgccataatt
    22561 ttcactcaaa taaagctcat aattttccgg tgctaagtaa tttttgccaa aaaattcgta
    22621 ttctataagc ttaaaaggag tatttttcca agcttgataa tgcccgttgt gataaaagcc
    22681 cattttttca taatgcacaa aaatgtctat acaaactcca ttaatatggt tgattacaag
    22741 ataatttggc acttcatcga cgatgatgaa tttttgatga tttaaaatca attcttttat
    22801 ccttttgaaa ttttccccaa aaactcctac atcaatgtcc ttatcataag aaataaatct
    22861 tttctcacgc acacaagcta aaaaagtcac gcttactaaa aacattaaaa tatcataggc
    22921 tttaagcaag gaatttaaat cccaaagtgc ttcttgaaaa ttttttgaag tgatttttcg
    22981 tgttttataa gattttaaag gaagcttgtg tttttttatg cataaaaaca aactctgctt
    23041 taaatatcct ttaaccttat cataatccct aactttcata gccccaaaag aaagcgattt
    23101 taaaagctct tcttccttta aagcaaacgg ggctttgttt ttgtattttt caaacaaagc
    23161 ttctaaaaat atcatttctt tctctgtttt tactcttttg ctaagctcta tccaagtttt
    23221 aagcctttta gaatgcaaaa ggcaaaattc taacaactta aaggcttcat tgttttttcc
    23281 taaagcactt aaaatttcac tttttaaata aaaagcgtcg atatttttac ttgttttttg
    23341 caaatatttt tctattaatt ctaaagcttt tttagaatct gtaaaataaa actcaatgaa
    23401 aacacaaagt aagcggacta aaaaaattcg ccctttgttt gtatgaaaac ttttttttac
    23461 tttagcttta aaagtcattt ttaattcttt gtaaaagttc gcttgtggaa atattttttg
    23521 tcctaggaag ataaattatc tcgcaaatat cttttaagtc atcaaactta ccctgccaat
    23581 catcgcccat tataaaaata tctgcctcat agcgaagtaa atactctctt ttaagctcta
    23641 aagcctcttc taaaagacgc tattgacgca ttttaaagaa gataagatac acgctctttc
    23701 tttttcatta aaaagcgggt agcgaccttt ttttgaaaaa ttaagctcat cacttgaaac
    23761 ccctacaaaa agctcatcac caaaatttga agccctttgc aaaagcttta aatgtccaaa
    23821 atgaaataaa tcaaaggtcc caaaggttaa aacccgcttt ctgtttaaag tcataatttt
    23881 tccttaaaaa attcaaaata caatgtataa tttaacaaaa agaaaaaaac aattagtaaa
    23941 gataaagctt aaaaattttc attttaagct tagattaaag tataaaaaat tttgtttttt
    24001 atactttaaa aggctcttaa aagttaaaaa aggtttggca aggcttttgt aaggttaagt
    24061 aaggattagc taaaaaagga ttttcttaaa ctttaaattt gtttcatttg caaaagcttt
    24121 tttaaagcta atttatctaa tcctcctcta aagtccttat aatcaaactc ttaggcaaat
    24181 taaaatgttc tatgagttct ttttcttttt ctctcatctc tccattgtct acttcatgat
    24241 caaagcctaa taaatgaagc atagcatgta taaaaagcaa acttacttct tcttcataac
    24301 tatgtcctaa ctctttagct ttctcttttg ccaaatctac attaatcaca acagaaccta
    24361 aagggagttt ttcatcaata ttttcaagtg gaaaggaaag tacatcagta gttttatctt
    24421 gttttctttg ctctaaatta atttcttgca tttctttatt atctacaaag ataagttcaa
    24481 catctttaga acttaaaaaa gaagctatag attctaaaaa ctcacatttt tcattgctta
    24541 atatcataaa ccctgcttta tcaaatggta taaattttct atttcttcat catcaaaaat
    24601 tgcacaattt ttactgctat aaaattctct taattttttc tcttcaaact caaaccctaa
    24661 agcacattgt gaatgtgaag gtaaaaaagc tcttaataaa gtaatgggat ttttaatttt
    24721 ctcatcacaa gcaaaacaaa taaattcttt atgcaatctc ccttcgaatt ccaaaatttt
    24781 taaataagca tcgacaataa cacgctttgg attttgtttt tcaaaccttt ttacgcactc
    24841 tttaagtaaa tcaaaataaa aattatcaag ctcttctaca tcttttaaat gtttatacaa
    24901 aagacgaata aactcttgcc aaattagcat tttacctctt tgcatgatcc acaaaaaacc
    24961 taaatgtaaa acatctttaa gtcttggcaa aaaaatagga ttttcctcta aagcaaaatc
    25021 gattttataa ccacttaaaa tactagaatg cctaagccca taaaaacgat aagctttaac
    25081 aagcatttta ggacttaaaa tataaacaat taaatcctca tctttaactt tttgagtatg
    25141 aagtataaaa ccttgcatta aacaatttca atgccataaa ctcgaagtaa atcaaaggca
    25201 gaaatttcta atttttcatc aaaacttgca cttaaatttt gatgaaaaac aatccttgca
    25261 ttgggcttag cgctaaaagt taaaatgata ttgcaaaaca cacaaatatg agaaacaatc
    25321 cctgcaaaat gaatttcttc ataatcgctt ttttgcataa aattagctag ttctaaacta
    25381 ccaaaggtgt ttttatgaaa aattttatga gctttttgta aaaaaggttc aaaatccttt
    25441 ggcatttgcc aacccaagct ctctttaata caatgtttta caggtaaatt taaaccttct
    25501 ttgctttgta aataatgctc atcatgtgta tcataagtta aaagtaaatg cgtgttatta
    25561 aaatcgattt gatttaaggc tttaagaata ttgtctttga ttttcaaagc cttatcaaaa
    25621 cctaaacttc catcgataaa atcattttga taatccacta aaacaaaagc ttttttcata
    25681 cttttacgcc ttttgaagcc aaaaactctc cgtatgtaga ttggcaaaag cggtttttaa
    25741 acttgtaaaa agcttgggat gatctttttc taaatttgct aaaagctgtt tagcttcttc
    25801 tctagcgtgt ggaaatttta catttttttc gctgagtttc ataccaggac aaaactcatt
    25861 tcctatcaca ctaagttcat tttgcactgc attatctcta agttgtcttt cacgcacaaa
    25921 aatcaaaggg cgtatcacag ttataccgcg tttactttga taaataggtg ccaaagttct
    25981 taaagctcca ttgtgaataa aattcataaa aaagctttct gctgcatcat ctaaatgatg
    26041 cgctatagca agcttattaa aaccttgttc aagagcataa gtatataaag ctccacgacg
    26101 cattcttgaa aaataactac aaaaacttga attttctctt atagtatcgc ctgatacttc
    26161 atagatattt gaatcaagca cgctatgttt aatgccatgt tcttcacaat gtgcatgaag
    26221 atgagaataa tcctcaccca taccataact taaagttacc gcttcaagtt caaatttaaa
    26281 aggagcgtgt gcttgcatac gatttaaaag atggactaaa gccaaagaat cttttccacc
    26341 gctaagccct aaaagaactc tatctccatc tttaatgagt ccaaatttgg cattggcttg
    26401 tgcaacttgg cgtatgagtt ttttactaag atttatcata atttctcgca cattttaagt
    26461 acaaaattgg ctgaaatttt agctgaattg atcacaaatt catcaaaatc aaattcagcc
    26521 ttttctcctg ctttatcgct catagctctt aagataaaac aaggtacttt taaagcatta
    26581 caaactaaag ccacacttgc accttccatt tcacaagcat cggcgttgaa aatttctctg
    26641 atttttactt tttttgcttc atcgcaaata aactcatcgc ctgttgcaat aatgcctgca
    26701 cgaagtttga tatttaattc tttagcaact tctaaggcaa gattatttaa tttctcatcg
    26761 gttttgataa aaatttcatt gcctggaaca aaacctaaag gatgtccaaa agcagtgata
    26821 tcaagatcgt attgtgccaa ttttgtagcg taaagtaaat caccgatttc aagctcagga
    26881 ttaaaagcac ctgcaactcc agtaaaaagc aacacttgtg cgccaaattt ttctatcatc
    26941 acacttgcac taagagtaga atttaccttg ccaattttag aatacgccaa aataagttca
    27001 tgatttttat agtttgcaaa atagtaagtg ttattagcgt gttctatttt cgtataatct
    27061 ttcagtgttt caagtaaagg agtaatttct tcactcatag ctcctaaaat tgctattttc
    27121 atcatataac ctttaaaaat tcatcaatat cattcatatt tgttaaagca taagtttctt
    27181 ttgaagtgat ttttttattc aaacccttaa gcacgcttgc accaaattct atgaaataat
    27241 ccacttcatt ttcacacgcc ttaatgcttt gtttataaag cacaggagag ataagctgtg
    27301 cttttaaaag ctcaagtgct tcttctttgc ttgtataaat tttagtattt gcattagaaa
    27361 gcacggcttt aaaatttggt tttaatacct tttcaagttc catataaagc ttagcagaag
    27421 cattttctaa aagcggacaa tgacttgcta cgctcatatt taaaagcatt gctcttttag
    27481 ctcctgcttc tttaaatgca ctttcataac ttgctaaatc aggttttaaa cctgctacga
    27541 caatttgtgc atcacaatta taatttgcag caaaaatttg cttgttttct ttttgtgctt
    27601 tttgacaaag ctcttcaacc ttttcatcgt caagtcctaa aactaccatc atacctgctt
    27661 caaattttgc acaatcttct tgcataaaaa gccctctttt atttactaaa gaaagagctt
    27721 ctaaaaaatc aaaagcacca tttacagcta aggctgaaaa ttctcctaaa gaatgaccca
    27781 aagcaaattt tgaacttaaa tcaggttttt tttcaagtaa aacagtataa gccattaaag
    27841 aatttaaaac aatggcaggt tgagtaaatt gactttgatt gagtttttcg ttttcttcaa
    27901 aaagcaaatg cttaaaatca atcttgcaaa aatcacttgc attttgaagg agttctttag
    27961 cttttataga gttctcataa aaatcttttc ccataccaag actttgtgag ccttgacctg
    28021 gaaatataaa tgcagcattc attaacggca accgcaacca ccaccacagc aaccgccacc
    28081 atgtccgtgt ccatgaccac ttccacaact atggcttcct gcgataatac ctgtaagaat
    28141 ttcatcttca ctcgcagctc tagcatctac aatatttaaa gaaaaaagca aatcacggcc
    28201 tgcataaggg tgattgtaat caattgttac atcattttca ccaatttctt ttacggttac
    28261 acgaacggtt tcaccatttt caccttctcc aaaaagttcc atacctattt ttaaatcaat
    28321 acctgcaaat tgctcttttg gtaaagtctg aactgcattt tcatcatact tacccaaacc
    28381 tttttctttt ttaattacta catcagcatt acttggacaa tcaagcttca ttacttcctc
    28441 ctccaagctt tctaaaatct gacctttacc taaaataaaa gaaataggtt gagaatataa
    28501 atttgattct aaaacttcat tcgtatttgc atcttttagt tcgtaaaaca tcgaaactac
    28561 gctatttttt tctatagcca ttttatctcc ttaatttatt ttctattagg cgaagctttt
    28621 gcttcaggtg aatttggata attagttttt aaagctttat aaaaaccatt tgccgctttt
    28681 gtatcacctg ttttatctag tgaaatcgca gtatgatata aaagttttgg gaaataatct
    28741 ccctttgtac tcaaagaaga acttttttta taataaacaa ttgcattatt gtattttttt
    28801 tgcttatact caatctcccc taaccaaaaa tttgctcttg cgggtttata ctgctttgtt
    28861 atgagaaaat ttaattttgc tttggaatct tcaaaagcat ttttatcaac atcttttatt
    28921 gctaattcta aaatttcatt attttttttc tttttccaag attcatcaat ttgctttact
    28981 ttatcatctt gggtgctatt gttttcaata gtattattta catctgcagc aacaatagta
    29041 ggagtggttt taatacttaa atttgcatca tttaattcat ttttagaaac ataatttgca
    29101 ttaatagcat ctactaaaga actaagttca gctaaaactt tttttacttg tttattatta
    29161 gcttcttgaa tttttctact ttcttcaaca taaactttta atttttgaat ttcactagta
    29221 aaattatttt caatatcttg actgctcttt tcaacttgag ttaatctaga atttgattta
    29281 gcatattgag aatttacacc ttctaaagtg ctttgcaaac cctcaattct ttcatcaatt
    29341 tcattaatcc tagcatttat ttgtatattt tcattattta aactatctaa tttttcttta
    29401 aataattttt catttgaagt taaaccataa gaagaatcgc ttgttatatc tcctgcacca
    29461 aaagctgagc tttctgcata aagtaaagta gctccaagaa gagctactgt gaatattttt
    29521 ttcattaatt atcttgataa tttaaattca gcacgtctgt tttgcgcatc gcaagcttta
    29581 gttttttcag tgcacacagg atttgtttct ccgtagcttt taacagcaat tctatcagca
    29641 tttacacctt tagcaatcaa agcttctttt acagcttttg ctcttttcaa acctagagct
    29701 tgattgtatt catccgttcc ccactcatcg cagtttcctt caacagtaat atttacaccg
    29761 cttacctcag tgttaaagat attagcattt gtgcttacaa cattttgcat atcaggacga
    29821 atgttgaatt tatcaaaatc aaaatatacc ttattcaaag tatcattaag ttgagaaatt
    29881 tgtgaatcaa tatcccaacc atctcttccg cccgaaccgc gatttgaatc aacactacta
    29941 tcactgctta cactagtgct ttttgtgcta caaccactaa taataactgc aagagctgca
    30001 atcgaagtaa aaagaatttt tttcatttat gacctttcaa agttaataaa ttcttactat
    30061 tatatctaat ttttaattaa ttttaaccta aaattgaaat ttttaccaat caattgattg
    30121 aatttttcca actttaagag gaaaataaaa agtcttattt gcatttacac gaataacacc
    30181 caaagcactt tgcgcaccta aatatttgat aaatactata cttccaccat cactagaaaa
    30241 tcttggaaat aaattttttc catttgctgt aagttgacga atgtaatcac tattaattga
    30301 catcaagtaa atattaaaaa cacccacttg atttggctca cgacttgaat aaaccaaaaa
    30361 atctttataa gtcgaaacag ctgaattatt tctgccatga aaaacaacct gttcagcact
    30421 attactattt aaatcttgca taaaaatgtt aggatatcct aagcgatcac ttacgaatac
    30481 cactttgcta tcatctgacc caataaaatt tccattaaca tcaataccag aataattagt
    30541 taattgtctt aaattcttag tatttaaatc atacaaataa acatcaggct gatcttttgg
    30601 agccatagta acaagtagtt tacttccatc tgcgcttaca tcacttgcta caaccatacc
    30661 gccacttgat aaaactttgc tagctttatt ggtatttaaa tcataacggt ataaagtcgg
    30721 cttatcataa tcgtaagctg tgtaataaaa taaagtttgt tctttatttc cccattttgg
    30781 aaataaatta agcccaccat caacaataat cttttgataa gttaaagtat aatcagtcat
    30841 aataatttga ctttttttag agctagaatt tctcgcaatc aaaattttat gatccatcca
    30901 atcaacaggt gcaagtccca aaacatttac agaagcttta acgcttttat gcgccaaaaa
    30961 tggatattgc tccaaaccat ttaaggtata agtttgctct gacttatcag aaccaccagc
    31021 ttttattttt acatttaagc tcaaagtgtt accattttta tttaaaacat attcaaaagt
    31081 ataattactt tcctcagctg cattagcaac aacttcaaaa tttgaactta cttttaaatc
    31141 attaacaatg atattataaa agcttttctt taaattctca tcacttaaat ttgaattgtc
    31201 tttaacgata atctttggca aaactatacc agaattaaca atatcaatca ccggatcttc
    31261 tgcccaaaga gttcctaaaa agactaaaaa aattgctaaa atttttttca tttttttctc
    31321 ctaatcaatt ttaacttttg cctcatctct taaattcatg gtaatgctta tatttttatt
    31381 ttgcggagga taagtaataa atttaccttt ttggctttct agaaattcag ccactttagc
    31441 atcatataaa ggatttccac ttttctcaac tgaagtataa ccaaattttc cattttcatc
    31501 aataaaaatt tttaccttaa cagaaatttt ttcactattt gggtaatact gggtccatct
    31561 ttgagtgata atacgcacaa ccttccctaa aaattcatca taaattccaa ttttttgtgc
    31621 ctttgtgctt tcaccttgca tagaactttc ttcttgaagt aaactgtcat tgagttgttt
    31681 tacaagttca gaagcttgag gttttggagc actagaaact cctgatttag cacttgattg
    31741 aatttttgtg gttttttctt cttgtatttc tttgatattt ccaaaaagct cattaaaatt
    31801 actcgccttt tggtcaatat cttcagtttt aactgtttta tttgtagtct gggcaaaaag
    31861 cttttctata tcaacttgtt ctgttggctt ttgaatttct ttaagagtgt tgttttgagt
    31921 aataagttgt tttgatggtt cagcaagttc gatatccaca aaactatctt ttatatcggt
    31981 atattgtatg gcgggttcaa cctcacttat aagtctaaaa aaaacaagaa ttattatact
    32041 aatgtatatt gctaaagcaa gtaaaaatga atttaaattg ctcaaaccat aatttttcat
    32101 gattattcag tctgtaaagc aactttatta aatcctaaat tttttacact tcttaaaact
    32161 aaaataacat catcgtattt taaactttta tcagcgcgta taaaaaccgg atcttcggtg
    32221 ttaaattgtg cttttctttg agcgagattg tcagcaaaac ttataaaatc atatttttct
    32281 tgatttaaaa aaatttcttt ttttgcatta atactgataa ttaagctttt aacagttgga
    32341 gcgctagtat ttttttgact accttgtgga agattaattt tttcctcata agtaatgctt
    32401 ggggctgtta ccattaaaat cgcaagcaaa acaagcataa tatccactaa aggtgtgata
    32461 ttaagctcag gtttttcatc atcaaatggc attttcaacc ttatttacta gaacttataa
    32521 cttttatctc actatcaatg atgcttaaaa gttcaaaagc ttttctttta atgatgagat
    32581 gaaatgtata agcaggaatt gctactaaaa taccacaacc tgtagcaact aaagcttcac
    32641 tgattttagg agctataatg cttaaagaat tttgagttcc aagtccacca aaggtttcaa
    32701 gtatagaaat aactgttcca aaaaggccta taaaaggtga agttgaagct atgatactaa
    32761 gccaagtaag tccagtagaa gcacggcgac ttgctaaatt tttatagatt tctaaatgat
    32821 ttaaagttgt atcattacac tttcttaaaa tagaatcagt atgacttaaa tctttctcac
    32881 ctaaaagcaa aatttctaaa ctttcttttt ctttactttt ccatgtagct aaataagtca
    32941 atttagcaaa taaaatacta aatgctaaaa taaaatataa agaaagccac aataaaacta
    33001 tgtaagtaat tatacttgag ctattgaaaa aatgaaatat agcttcaaaa ttcattaatg
    33061 catccttgca ttatcaagtt ttgaaaaagt tgccgctaaa gctacattat cagaactcat
    33121 agatttaatc aaatcttttg cttgggcaag atttttttca atctcacttt cattacttcc
    33181 gcaaacccaa actgcacctt ttgccaacac acaaatttta tcctcatcta cctttacatg
    33241 tcccgaatca atggcgatta attcatgatt taaatcagct ttttcaatat caattacccc
    33301 agattttaaa gaagaaacta aagcagcatg tcctttaagc actccaaatt ctccttcgct
    33361 acctggaaaa gtaacagatt ttacttctcc ttgatagatt aaacctaaag gtgtaactat
    33421 ttcgaaatta atcaaatcat tcataaaatt aaccttttaa tttatccgct tttgcaatag
    33481 cttcatctat atttccaacc atatagaaag cattttctgg taaatgatca tatttacctt
    33541 ctaaaattcc tttaaatcct gctattgtat cttcaaggct tatatatttt cctgggctac
    33601 ctgtgaaaac ttccgcaaca aagaaaggtt gtgataagaa tttttcaatc tttcttgctc
    33661 tttcaactac aagtttatct tcttcgctaa gctcatccat acctaaaatt gcaataatat
    33721 cttgcaaatc tttgtatttt tgaagtactg attgaacacc acgagcaact ttataatgct
    33781 cttctccgat gatatttgga tcaagcattc ttgaagttga atcaagagga tctactgcag
    33841 gataaatacc tttttcagca atagctctat ttaaaaccgt tgtagcatct aagtgagcaa
    33901 aaacagttgc tggagctggg tcagttaagt cgtctgctgg aacataaaca gcctgaactg
    33961 aagtgattga acctttttta gttgaagtaa ttctttcttg gaatttgccc atttcactag
    34021 ctaaggttgg ttgataacca acagctgatg gaattcttcc taaaagcgct gacatttcag
    34081 aacctgattg tgaaaatcta aaaatattat caataaacat gagtacatca agttccattt
    34141 catctctaaa atactcagcc attgttaagc ctgttaaagc aatacgattt cttgcccccg
    34201 gtggttcgtt catttgtcca taacataagg caactttatc taaaacattg ctttctttca
    34261 tttcattata aaggtcattt ccctcacgag ttctctcgcc aacacctgca aatactgaat
    34321 aaccgctatg tttaaaagca acattgtgaa taagctccat aataataaca gttttaccaa
    34381 cacctgctcc accgaaaagc cctactttac caccttttgc ataaggagca agtaaatcta
    34441 caaccttaat tcctgtttca aaaatctcac tttttgtgct ttgctcttca aaagctggtg
    34501 gatctctatg aatcgcccat ttcttatcaa aagaaatttc ttcgccctca tcaattaaat
    34561 cacctgtaac attgaaaatt cttcccaaaa ctttttcacc aacaggaacg ctaataggag
    34621 cacccaaagc ttcaactttt aagcctctta ccaaaccgtc tgtcatatcc atagcaatag
    34681 ttctaactct attatctcct aaatgagctg ctacttctaa aacaagttta tgtttttttc
    34741 cttcgctttc aaaatttaca acaattgctt cattaatttg aggtaaatag tcgttaaaat
    34801 ctacatcaac aactggaccc aatacctgtg aaataaatcc ttgcattatt tatcttctcc
    34861 ttaaatttta ctatttcatt gattcaacac cactgataat ttctataagt tcagtggtaa
    34921 tagactcttg tcttgccttg ttataagcta aatttaattg tttcactctc acttttgcat
    34981 tattggttgc attatccata gcctgcattc tagcgctatg ttctgccgct aaagaatcaa
    35041 ttaacgcata atacatatta tactcaaaat atgttttcat taaatcttcc aaaagctcag
    35101 ttccttctgg ttcaagctct aaaagagaat tatgagtctg ttcgatactc tttggttcaa
    35161 ctggaataag atgattaatt ttaagctctt gagtaatcat atttttataa ccattatgca
    35221 ctaaaattac ttcatccgta tttccattta gaaaatcatc tacagcagta tgaattactt
    35281 cacatgcttt ctcataatca ggactagaac taagatgaaa atacttctct aacaattcta
    35341 ctttttgaaa attaaaatac tcaattccgg ttttacctat agctctaaga cgaatattga
    35401 tattttttac tttatattct tttagcattt cacttactgc ttttaaagtt ttaacattaa
    35461 aaccgccaca caaaccttta tctgcagtaa taaatattaa atctacggtt ttaatttgtt
    35521 cttttttatg aaacaaagat aaacgcgtat catcttcatt gtgaacaatt ttgttaattt
    35581 gaaatgaaat ttcactcaaa atttcatcga ttttttgtgc ataaattttt gatcttttag
    35641 ctgcttcttc tgcttttttc agtttagcag tagaaactaa tttcatagca ttagtcgtct
    35701 tttgtgtatt gtgaacactt ttaatttttc ttttaatttc ttttaaatta gacataaaag
    35761 accttataaa tgatttgctt taaactcatt aatggcttta gctagctttt cttctaattc
    35821 agaatctaaa gcttttttag aacgaatttg ctcaaaaata tctggatgtt ttgattcaat
    35881 aaaaagataa attccatctt caaattcctt aatcttagaa acagcaatat catctaagaa
    35941 gcctttagtt cctgcaaaaa ttaaaaccac ttgtttttca acactaagtg gagaataagg
    36001 tggttgtttt aaaagctcaa ccattctttg accgcgttca agttgctttc tacttgcttc
    36061 atctaaatca cttgcaaatt gcgcaaaagc ctgaagttct ctatattgag caagatcaag
    36121 tcttaatgta cctgaaacct gttttgtagc ttttatttga gcagcaccac ctacacgaga
    36181 tactgataaa ccaacgttaa ttgcagggcg aattcctgag ttaaacaaat cagtttctaa
    36241 gaaaatttgt ccatcagtaa ttgaaataac attagttggg atataagcag aaacatctcc
    36301 tgcttgtgtt tcaattattg gtaacgctgt taaagaacct gcacccaatt catcatttag
    36361 cttgcttgct ctttcaagca atcttgaatg aagataaaaa acatcccctg gataagcttc
    36421 acgacctggg ggacggcgta aaattaaaga catttcacga taagctacag catgcttact
    36481 caaatcatca taaacaatta aagcatgttt tgcattatcc ctaaaaaatt cacccatggt
    36541 tacaccggta tatggagcta aatattgtaa agctgcagaa tctgaagcgc cagcatttac
    36601 aacaatgcta tattccatag caccatgttc ttcaagtctt ttaaccactt gtgcaactgt
    36661 actttgcttt tgtccaattg caacatatat acagataaca ccctgacctc tttgagatat
    36721 aatagtatca acagcaacag tagttttacc tgtttgtcta tcacctatga taagctctct
    36781 ttggccacga ccaattggta caagtgtatc aatagcttta attcctgtat gcaaaggctc
    36841 gtgaacgctt tttctagcca tgataccttt tgctttttct tcaacaaaac gatattcatt
    36901 agtattaatt acacctttag catcaattgg ttcacctaaa gcatttacaa cacgaccaat
    36961 taaagcctca cctactggaa ctttaagtaa ttttttaagt ctttttacag aagcaccttc
    37021 ttttaaaccc tcttcttttc caagtataac aatacctaca tttgactctt caaggtttaa
    37081 ggccattcct ttatcgccat tttcaaattc taccatttct ccagccataa tattcttaag
    37141 tccatatacc ttagcaacac catcagctac agaaataatc tttcctgttt cttcaatttc
    37201 aagatttaaa tcaaaatttt caattctttc tttaattatt gaactgatct catcagcttt
    37261 aaatttcatt tactttttct ccttagataa ttttcagtat atattcgttt agcttatttt
    37321 gaaaagcttt catagaaaaa gaaagtttat aacctaattc ttctaattct attttaacac
    37381 tattatcttg actgatttta ttatttaatt taatatttgc atcaaatttt ttgttaagtt
    37441 ttgtttcaag atctttaaga ctctcttgac tcagattctc tttagaatat acaataccaa
    37501 caaaaatatt ttctttaaaa gccctttgtc tttcaagctc tttaactatc tgaggaatgc
    37561 attttaatct tgaattttca atcaaaagtc ttaaaaaatt ttgaaaa
//
LOCUS       DAPWAA010000005        36653 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.005, whole genome shotgun sequence.
ACCESSION   DAPWAA010000005 DAPWAA010000000
VERSION     DAPWAA010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 36653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36653
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.005"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            10..819
                     /locus_tag="RTF91_000247"
     CDS             10..819
                     /locus_tag="RTF91_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDZ4943182.1"
                     /translation="MKKILFLFCSFLFAFAKPNLEIPKLSDQAKQNFILKNIKFNHNG
                     TIYKIFIAKNKNENLNYKYKIIYLLDGNAFFPLFLNLFNTPVKENLLIVGIGYDNDLA
                     FDTQKRTKDYTPTVNLNKQGGGSKEFRNFLTTQLIPYINKTYSIDLNYQILFGHSFGG
                     LFAIDTLLYDTKLFSHYFIISPSLWWNNSNFLPSTIKLQTCPKIYIGLGSLEINSSII
                     KGIAKLNAKELSEKISKETTCKTHFKFFENETHGSVTSKAMLWMKEFFNLN"
     gene            complement(812..2473)
                     /locus_tag="RTF91_000248"
     CDS             complement(812..2473)
                     /locus_tag="RTF91_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDZ4943183.1"
                     /translation="MQDFVYIKNDVLIPLPDAIEILDQANDKETLISNDKNQKAQIYA
                     PEINFYLKNSQDEILEQSKNVLTLYEVRASVYDLGLDLEQSKEVQNRLIVVDADTQTV
                     EFLKEHGFKVIALSSAEILAVFGSVGELCAVVKNQGEEMEVDFDFLLFKAEDLSALRK
                     DFTRQSGCYNLFDFKNLEALLKFLQSKSPNYHYKTYITYNASVCQYHERRSEHCAKCA
                     EICPTVAILKDDENKHLEFSQVDCLGCGGCISVCPSGSLDYAPMPRESFFTLCEFYKD
                     KKILIIPKKMPLENLNLVLPKDVLPFIIEGEKWLSSMYFLALLQSSGANLVFYTDFVS
                     RGSNEAIMLLNTFFERKFQKKAIFIAKDEKELQNALKEQEFIQDLKFDFHNNTLTTRE
                     NFAQRMQKMITNEDFGSIQSGEWLRYGRVEINSNTCTLCLSCVGACNVGALIADAKEN
                     TLKFNASLCTTCGYCELSCAEKNTLKLVRSGMEFRASYFEYQTMAKDELFACVECGKE
                     FATKKAVEKIANLMKSKFGNDENKIKTLYCCADCKAKVMIKTMIN"
     gene            2552..3874
                     /locus_tag="RTF91_000249"
     CDS             2552..3874
                     /locus_tag="RTF91_000249"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDZ4943184.1"
                     /translation="MNKLRTFPQINTLIEDENLKSYPFYIKAFFCKKVVAKLKDDFSQ
                     NEISKDDLLLEIKKEIKAFYRKDLQSVINASGVVIHTNLGRSVIHEELYKACKDILCN
                     YSNVEFDLENGKRGSRYALVLEKLKMLFECEDALVVNNNAAAVFLVLNSLCYDKEVIS
                     SRGELVEIGGNFRMPEVIKAAGVKLCEVGTSNKTYLKDYEQAINENTKMLLKTHKSNF
                     ALMGFHSEVNIKDLHSLAKVKGLLSYYDLGSGWCENLNEKLIKHEPKIRKLVQECDIL
                     SFSGDKLFGSVQAGIILGKKELIEKLKQNQLLRMLRVDKLTLSFLNESLKAYLQKDYE
                     KIITLKLLNDDLSFIEKKALKVQKELKFQTQLKISKSLVGGGSMPDKSLDTYILAFQG
                     NALKLQAQFRDKNIIGRIENDKFILDFRTIRENELQKLIFTINQMEIL"
     gene            3871..5676
                     /gene="selB"
                     /locus_tag="RTF91_000250"
     CDS             3871..5676
                     /gene="selB"
                     /locus_tag="RTF91_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDZ4943185.1"
                     /translation="MKSVIIGTAGHIDHGKTSLIKALNGFEGDSLKEEQERQITINLS
                     FSNLKLKDKNISFIDVPGHKDLVKTMVSGAFGFSICLFVVDINEGLKEQSLEHLEILK
                     ILNVENTILVLSKCDLCENIKQKSAEILEELKNLDYPILKVFHTSIKNNQGIEELKNY
                     FYTIENKENDEELIFHYYIDRVFSLKGIGTVVTGSLNEGSITLNEKIICLDTQKELVV
                     KNIQNHDTNLEQIKACNRVALSLNCDYKELKKGYLLSKKGYFKGFKECDTLVRAKNLQ
                     NSKMVFCVGSKQIECKINILKELGNDEFFVHFSFDKNIFLSFDEAFVLLQNNRVIGGG
                     RVLNPLSEPLKKEQKNKFLMFLKNKDFKAAFSFLKDTHKYGFGLLSSYQRFKLSHQKA
                     LKLAKELNQVFVDEKNLNIYHLQSLEEIKNFIKFILEKNPYAMLSAHSLALRIAWASE
                     NFCELGLKEMSNFLDFQNGIYFKKGIDFEKLQEKNNNEMYEILKKQGIKPEAPYNLYD
                     FLELDRKSGDNILKKLTQKGLVIRLSYNLFIEKQALEKLMQECLNLLKNQSLDVQSMK
                     EYFNLSRKYAIAYLEHLDKFPQVSKEAEKRFLTNI"
     gene            5726..6436
                     /locus_tag="RTF91_000251"
     CDS             5726..6436
                     /locus_tag="RTF91_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDZ4943186.1"
                     /translation="MRKLSLILAYSASLFAASNSEISDFYSKSIKVQFPNATVSVTNR
                     QKVGNTGFESVIVSVELNGQKQENILFTKDNLITPDLIDLKTGISYAQEYEMKKFQEV
                     RENFTKNAKAVAQKETMVISLGDKNKPAIYVFSDPECPYCREHLAQIEDELKNYQVNY
                     ILTPVHGKSAFEKSALIYKETKKAKNDKEKIAILNKYYDANIKDYPKVSDTELKEAFS
                     LYEKYRSLGLSATPIIIK"
     gene            6443..6973
                     /locus_tag="RTF91_000252"
     CDS             6443..6973
                     /locus_tag="RTF91_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943187.1"
                     /translation="MSKFTLILNLFIALFMSACANTTFIQSSIQTSNEGIFIKSQKQQ
                     SFKISFQNPSQLQTTLDKDLALKLKNLGLKETKENTDYEILINLVDMKKHSYAQKITT
                     SVRFFYDFDPLESNGEWMVENYYIMQVNLQINSKNHNSQKTSLIARTTYLGNKKRCQL
                     SLENKIINQIMSFFYF"
     gene            complement(7017..7508)
                     /gene="fldA"
                     /locus_tag="RTF91_000253"
     CDS             complement(7017..7508)
                     /gene="fldA"
                     /locus_tag="RTF91_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HDZ4943188.1"
                     /translation="MSVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSY
                     DKLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAQ
                     NLKNAGANLVGEVSTDGYTFEASDAVVDGKFVGLALDNDNQEDQTESRIDTWVEQIKP
                     YFA"
     gene            complement(8187..8501)
                     /locus_tag="RTF91_000254"
     CDS             complement(8187..8501)
                     /locus_tag="RTF91_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2325 domain-containing protein"
                     /protein_id="HDZ4943189.1"
                     /translation="MSVLVVGADEITPIRAVLHDLGAKKIEHWDARNENRVNRKPIPC
                     DTECIVMLTSFLNHNTMKKIKNEAKKRKIPLVCAKRSVSCVYCEYCKIFNLNKEFSCY
                     KG"
     gene            8673..10097
                     /locus_tag="RTF91_000255"
     CDS             8673..10097
                     /locus_tag="RTF91_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDZ4943190.1"
                     /translation="MKKLTNDFGNIIADNQNSLSAGAKGPLLMQDYLLLEKLAHQNRE
                     RIPERTVHAKGSGAYGEIKITADLSAYTKAKIFQKGEITPLFLRFSTVAGEAGAADAE
                     RDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWD
                     FWSLCPESLHQVTVLMSDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTQQGI
                     KNLTNQEAAELIAKDRESHQRDLYNAIENKDFPKWKVQIQILAEKDIEKLGFNPFDLT
                     KIWPHSLVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSY
                     PDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDTYKNDAAYYEPNSYNNSPKEDK
                     SYLEPDLSLEGAVQRYAPLDNDFYTQPRALFNLMNENQKTQLFHNIASSMEGVDEKII
                     SRTLEHFEKISPDYANGVKKALEK"
     gene            10153..10623
                     /locus_tag="RTF91_000256"
     CDS             10153..10623
                     /locus_tag="RTF91_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj1386 family hemin-binding protein"
                     /protein_id="HDZ4943191.1"
                     /translation="MTTLSLEEEKRFEELCKMAFNFARNDECENLKIMIEAGLNVNLK
                     THKGDTLLMLAAYNNSYESAKMLLEKGAKVDEKNDRGQTPLAGVCFKGYLPMCELLVK
                     HGANIDENNGLGMTPYTFAIMFGRKDVAEFLLKKSKNNFLKKISLKILKFIKKI"
     gene            complement(10624..11280)
                     /locus_tag="RTF91_000257"
     CDS             complement(10624..11280)
                     /locus_tag="RTF91_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HDZ4943192.1"
                     /translation="MNEGQKQQFIKLTYFLGEVLGEQYEIVFHVITEDGACIAAIANS
                     HISGRNLDSPLTAFASELIQNKKYLEKDFLSDYKALVGKSKLIRGSTFFIKNYDRLVG
                     ILCINHDTSIMRDLICKMVDLEKIGNMGKILGNINFSQNDSNIEILSHSIEDILAQSV
                     DASYLNSDYQLSITQKEEIAEKLYEKGIFNIKGSVSIVAKFLKISEPSVYRYLKKFKK
                     "
     gene            11448..11810
                     /locus_tag="RTF91_000258"
     CDS             11448..11810
                     /locus_tag="RTF91_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDZ4943193.1"
                     /translation="MSNYPKAIGPYSAYKEANGFLFISGQLPINPASGEIESSDIKEQ
                     TKQSLKNIGAILEENGISYDKVIKTTCFLADINDFIAFNEIYAEFFKAPYPARSAFAV
                     KDLPKNAKVEIEIIAQKG"
     gene            11814..12585
                     /locus_tag="RTF91_000259"
                     /pseudo
     CDS             11814..12585
                     /locus_tag="RTF91_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247107.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            12598..13761
                     /locus_tag="RTF91_000260"
     CDS             12598..13761
                     /locus_tag="RTF91_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HDZ4943194.1"
                     /translation="MNSKTKLIHCGRGDQGAEIRSVNPTLMRASTILFKDHTTWQKYK
                     KLRKTDRVLSYGARGTTTNFELEKLICTLEGGYRAQLFPTGLAALAMVLLNYASKDAH
                     FLITDAIYGPVRTICELFLAKMGIEVDFLKADASDIEEKIKPNTKLILCESPGSILYE
                     IIDLPKLCKIAHAHNIPVAIDNTYSSGYFLNPLELGVDISVIAATKYLSGHSDVTMGI
                     VVINEKEWKNFDKLPEILGFTTSPDDVYLVLRGMRTLDVRMKAHEKSADEIVEFLQSR
                     KEIKTIFYPKLKSHPNHEIFMRDHKGANGMITIEFTEGYSKDDAIKFVDKLEYFSIGA
                     SWGGYESLATVTTPPRTATNWSTRGPFVRFHIGLEDTKDLIADLTQAFDSIKK"
     gene            13771..15138
                     /locus_tag="RTF91_000261"
     CDS             13771..15138
                     /locus_tag="RTF91_000261"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDZ4943195.1"
                     /translation="MTGISVFDHRLLADSWSTQDMRAIFCEQNHIQKWLDVEAALAKA
                     QAKLKIIPKKAADEIAKKAHYKFMDMDFIFAEFKKTKHTLVPTVRGLEKACDNNLGEY
                     VHFGVTTQDIIDTGLVLQFKEAMNLVKSELKAIAKALAKLAKTHKNTAMMGRTLALQA
                     LPITFGHKVAIWLSELERHFERILELEKRLYVGSIVGAVGTKASLSDQCNEVEKLTLE
                     NLGLKVPNISWQSARDRFIELGFVLGNINATFNKIAHEILILSHNEIDEVAEPFGKGQ
                     IGSSTMAHKRNPAISENAVTVSNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMF
                     LMLSVVLANMKFALSNLEVKKDKMLKNLNTLNGFVLAERVMFALSDHYGKQHAHEIVY
                     ENAMLGIEKQKTFKEVLLADKRVSKVLKEKEIDALLDTTTYVGYAPKLVDEFLTKIKN
                     SAILK"
     gene            15147..15914
                     /locus_tag="RTF91_000262"
                     /pseudo
     CDS             15147..15914
                     /locus_tag="RTF91_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843169.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
     gene            complement(16078..17570)
                     /locus_tag="RTF91_000263"
                     /pseudo
     CDS             complement(16078..17570)
                     /locus_tag="RTF91_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344782.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
     gene            complement(17576..18400)
                     /gene="fabI"
                     /locus_tag="RTF91_000264"
     CDS             complement(17576..18400)
                     /gene="fabI"
                     /locus_tag="RTF91_000264"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HDZ4943196.1"
                     /translation="MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALK
                     KRVEPIAEEFGSKFVYELDVNNNEHLDSIAEKIKKDLGQIDFVVHAVAFAPKEALENS
                     FLETTKEAFDIAMQTSVYSLLSLTRAVLPILKDNSSILTLSYLGGVKYVPHYNVMGVA
                     KAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNV
                     SIEDVGNSAMYLLSDLAHGVTGEIHYVDAGYNIMGMGDVEKNKEGQTVLCWDNQKE"
     gene            complement(18404..19075)
                     /locus_tag="RTF91_000265"
     CDS             complement(18404..19075)
                     /locus_tag="RTF91_000265"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDZ4943197.1"
                     /translation="MIFAANLKCNHTRASFRIYAEILNKTMGAKSDDIIVFPPSIAFL
                     ESQTHFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCLLIGHSERRALGDEELIRAKF
                     DFAKEHDYKIVFCIGENLDIKNSGKTLEFLKKQLQIIDLNYEKLIIAYEPIYSIGTGV
                     SAESKDITKVLEFLASLTKVPLLYGGSVNENNIKEILSVKQCGGVLIGSAALKVENFI
                     KLIKG"
     gene            complement(19072..20274)
                     /locus_tag="RTF91_000266"
     CDS             complement(19072..20274)
                     /locus_tag="RTF91_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDZ4943198.1"
                     /translation="MSDIISIKDIDLTKKKVFIRCDFNVPQDDFLNITDDRRIKSAIP
                     TIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEVIMAKDVIGEDAKT
                     KAMNLKTGEILFLENLRFEKGEIKNDENLAKELAFMAQVYINDAFGVCHRAHSSVEAI
                     TKLFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALNNLLPKVDK
                     LIIGGGMAFTFLKAQGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPAC
                     SQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKG
                     SIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVK
                     ALRSKENE"
     gene            complement(20277..21275)
                     /gene="gap"
                     /locus_tag="RTF91_000267"
     CDS             complement(20277..21275)
                     /gene="gap"
                     /locus_tag="RTF91_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDZ4943199.1"
                     /translation="MTVKVAINGFGRIGRCVARIILERNDIEIVAINDTTDIELTKYL
                     FKYDTVHGEFKGSVDNENDDLVINGKKIKVFKSRNVKDLDFAKYGAQIVLECTGAHLT
                     MAKCQEFLDMGMQKVIMSAPAKDNTPTYVLGVNSELYKGENIISNASCTTNCLGPVCR
                     VLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVM
                     PELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKEEINNAFRKAAATNLKGILMVDDD
                     ERVSSDFITCSYGAIVASDLTQVIADDFIKIIAWYDNEWGYSSRLVDMAVYTANKA"
     gene            21336..21881
                     /gene="nadD"
                     /locus_tag="RTF91_000268"
     CDS             21336..21881
                     /gene="nadD"
                     /locus_tag="RTF91_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HDZ4943200.1"
                     /translation="MKIALFGGSFDPPHNGHNSVVLEALEKLDIDKLIIMPTYINPFK
                     QNFSADEKQRFLWVKKLWGHLPKVEICDFETKQKRPVPSIESVKYLYKLYNPNKFYLL
                     IGADHLEKLHLWHDFEKLNSLVEFVITNRNDIEIPKNFKDLKTDKKIASSFIRNTLNT
                     NEVCEEIKDEVKKYYEKLQKN"
     gene            21912..22238
                     /gene="rsfS"
                     /locus_tag="RTF91_000269"
     CDS             21912..22238
                     /gene="rsfS"
                     /locus_tag="RTF91_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDZ4943201.1"
                     /translation="MQERIDLIVKILDEKKAEDIKTIDMSEQEYFVKYVIIAATLGER
                     HALSLIDELKTKLKTKGEEFINIESSEEWSVIDLGDILIHLLTPKHRGIYNIEELLES
                     LKKSRV"
     gene            complement(22337..23719)
                     /locus_tag="RTF91_000270"
     CDS             complement(22337..23719)
                     /locus_tag="RTF91_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HDZ4943202.1"
                     /translation="MTLRKKMLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNK
                     GCKNVSVGWDARYSANELFNYLVSGLNKAGIKVYDIGLVPTPLGYFSLYEGLKFDANI
                     MITGSHNPKDYNGFKITINKESFFGVELKEFSKEVYKHLDDEIEENLEVQKYDILSLY
                     VKFMCEQFSFLKDFNYKFAIDCTNGAAGVVIEPLIKALNLKAHVMFAEPNGQFPNHAP
                     DPTEEENLSVIKEFLNQNQDYSLAFAFDGDADRVVTLSKTHVFCGDELCYLFAKNIPN
                     PRILGEVKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRY
                     FGYDDGIYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIPVNEQEKFKLVEEFQKA
                     VEKGALKGVKSLCEIDGARVDFGYGWALLRASNTSPYLITRFEANSLEQAKELERMVF
                     ALFDEIKARL"
     gene            23821..24357
                     /gene="fliL"
                     /locus_tag="RTF91_000271"
     CDS             23821..24357
                     /gene="fliL"
                     /locus_tag="RTF91_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HDZ4943203.1"
                     /translation="MDDELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSS
                     SSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVK
                     CTIELEQNSELLKPELDKKVSVIRDIIIRVLTAKTFEEVSTQKGKERLKDELVGKINE
                     ILTDGFIKNIYFTDFVVS"
     gene            24358..24705
                     /locus_tag="RTF91_000272"
     CDS             24358..24705
                     /locus_tag="RTF91_000272"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HDZ4943204.1"
                     /translation="MRVGCDIIAISRIEKIHSRNGKNFLDKFLNPKEQMLIKNPATLA
                     GLWAAKEAASKALGVGICELCSFFDIEISKDERNAPKLKYSQKIVKDFNITQTSLSIS
                     HDNGFAIAIVAIV"
     gene            complement(24707..25126)
                     /locus_tag="RTF91_000273"
     CDS             complement(24707..25126)
                     /locus_tag="RTF91_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943205.1"
                     /translation="MKRVRTRIRVNFRRCVKRTLKGSLKEKLAGTILLCAIVPLAVLG
                     YLFIVIMGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNHKKWARIVI
                     KITDFFQKDHCKRANKREQPVVDFILSRNLDKQTIGK"
     gene            complement(25123..26484)
                     /locus_tag="RTF91_000274"
     CDS             complement(25123..26484)
                     /locus_tag="RTF91_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HDZ4943206.1"
                     /translation="MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYV
                     KMPNFDLYVINDTKEVKRMMVDEVREFPKSEFLHELLSPLLGESIFTTNGEVWKKQRE
                     LLRPSFEMTRINKVFNLMSEAVTDMMERFKKCPNHAIIEVDEAMTFITADVIFRTIMS
                     SKLDEEKGKKILNAFATFQEQSVHTAMRRMFCFPKWLSYVLGDRKRAKAGDVIRQILS
                     DIIKPRYDMANNAEFEDILGSLLLVVDANTNKRFSFEEILDQVAMLFLAGHETTASSL
                     TWTLYLLSLYPKEQEKAYEEIIQVLQGGGIEILHLRQFKYLTNIFKESLRLYPPVGFF
                     AREAKKDTQVRDKLIKKGSGVVIAPWLIHRHEKFWTNPHGFNPSRFEGEYKKDAYLPF
                     GVGERICIGQGFAMQEAILILANILKVYKLELEEGFLPDVVGRLTVRSANGMRIKFSK
                     REL"
     gene            complement(26481..27602)
                     /locus_tag="RTF91_000275"
     CDS             complement(26481..27602)
                     /locus_tag="RTF91_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF829 domain-containing protein"
                     /protein_id="HDZ4943207.1"
                     /translation="MTRDVFYIAGYDPKSYRFYYDLFKKNLKDYSYNFNIKADINKIE
                     KNEQFPFFKISYESVQTKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIK
                     FGRESIYQLITGYYPFFYVLFSLIFSLTLALGSFAFLQNYMHFSLAIIIGCFLGFLLN
                     HFLFKLGKKLAVFWIARICAFCATWQDKKIGAMQERIKLFANTIVDKLKQNENKQDYE
                     LILVAHSVGAIVCIEVLEYLLRQNLDPSLLHKLKILTLGECIPLVSYQKKADEFRKKL
                     EFVSKFDLKWYDYTSIIDGACFPQVDFFRTSGVDAKFTPLFLSAKFHTLYEKHEYKKI
                     KRDKNKAHFLYLYSIGVKGDYDFFSFIIMPKFLEEKVKI"
     gene            complement(27671..28855)
                     /locus_tag="RTF91_000276"
     CDS             complement(27671..28855)
                     /locus_tag="RTF91_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDZ4943208.1"
                     /translation="MRFSSKIKKEFSGKNVLLLQGPVGNFFHYLAAKMKKNQTKVFKF
                     NFNGGDFFFYPNGTRCKCDEKDLENFYSGFFQSKKIDAIVMYNDCRTIHVKAIKIAKE
                     LGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
                     MAFDAFLYWFFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIY
                     NLEKKYFLAILQVYNDTQIKHHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRG
                     YRNYSKLINELSQKYHVEGRVLYVHDTHLPVLLKKALGCITINSTVGLSAILEGCPTK
                     VCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVYHFKKYLLQTNQFNGNFYKNFFL
                     DK"
     gene            complement(28852..29949)
                     /locus_tag="RTF91_000277"
                     /pseudo
     CDS             complement(28852..29949)
                     /locus_tag="RTF91_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344797.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
     gene            complement(29997..30665)
                     /locus_tag="RTF91_000278"
     CDS             complement(29997..30665)
                     /locus_tag="RTF91_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HDZ4943209.1"
                     /translation="MQAIVLAGGLGTRLRSVVQDLPKPMALINDKPFLEFIFEYLKKQ
                     GIKEVILAVSYKYEVIKEYFKDEFLGIKIKYSIEKEPLGTGGAIKEALRFIKNEAYVL
                     NGDTIFDIDLKKLTLNDSKICLALKQMNDFDRYGTVELDNKNYIKFFKEKEFKKQGLI
                     NGGIYLLSKDIFNDFTLQEKFSFEEFLQENYEKLKARAEIFDNYFVDIGTAEDYNLFC
                     RLQY"
     gene            complement(30653..31258)
                     /locus_tag="RTF91_000279"
     CDS             complement(30653..31258)
                     /locus_tag="RTF91_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDZ4943210.1"
                     /translation="MENLNSYIKEHFTDSISVKEQILKDKNLITLIKNVSLEVIKAYK
                     NGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRLGIASIALTTDTSVLTAIGNDYGYEN
                     LFARQVQAQGVKGDVFIGISTSGNSKNILKALELCKEKEIISIGLTGASGGVMNELCD
                     YCIKVPSTCTPRIQEVHILIGHIICAIVEEELFGEGFDCKL"
     gene            complement(31246..32265)
                     /gene="hddA"
                     /locus_tag="RTF91_000280"
     CDS             complement(31246..32265)
                     /gene="hddA"
                     /locus_tag="RTF91_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-D-manno-heptose 7-phosphate kinase"
                     /protein_id="HDZ4943211.1"
                     /translation="MTTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCT
                     LIEREDEKIIFDSPDTNSYSEYESKEFLENDGKLDIFKSIYNRIVKDFAKRPLSFSLH
                     TYSNAPSGSGLGGSSTLVVGVIKAFAEWLNLSLGEYEIAKLAYEIEREDLGIVGGGQD
                     QYAATFGGFNFMEFYDNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEEHKQ
                     GKLGDEKSLEAMHAIKQDAIKMKEALFKADFDTLAQILGKSWQSKKIISEIVSNDELE
                     RIYKLAIDNGAYSGKTSGAGAGGFMFFFIDPTKKYNLIKALSKEQGYVQDFSFTKEGV
                     KSWRI"
     gene            complement(32287..33130)
                     /locus_tag="RTF91_000281"
                     /pseudo
     CDS             complement(32287..33130)
                     /locus_tag="RTF91_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344809.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
     gene            complement(33152..34093)
                     /locus_tag="RTF91_000282"
     CDS             complement(33152..34093)
                     /locus_tag="RTF91_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase"
                     /protein_id="HDZ4943212.1"
                     /translation="MSKKVLITGGAGYIGSVLTPILLEKGYEVCVIDNLMFDQISLLA
                     CSHNKKFTFINGDAMDENLIKQEVAKSDIIIPLAALVGAPLCKRNPKLAKMINYEAVK
                     MISDFASPSQMFIYPNTNSGYGIGEKDAMCTEESPLRPISEYGIDKVHAEQYLLDKGN
                     CVTFRLATVFGISPRMRLDLLVNDFTYRAYKDKFIVLFEEHFRRNYIHVRDVVKGFIH
                     GIENYDKMKGQAYNMGLSSANLTKRQLAETIKKYVPDFYIHSASIGEDPDKRDYLVSN
                     AKLEATGWKPDNTLEDGIEELLRAFKMMKVNRFANFN"
     gene            complement(34117..35154)
                     /locus_tag="RTF91_000283"
     CDS             complement(34117..35154)
                     /locus_tag="RTF91_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HDZ4943213.1"
                     /translation="MQTNSKIYIAGHKGTAGTALVENLQKRGFNNLVLKTRQELDLVN
                     QQAVAKFFKEEKPEYVFLTAVLPCGAANVAQRADFIYENLMIQNNVIHNSFLNNVKKL
                     VFFGSGYMYPENAKNPLKEEYLFQGDLEYGAYSFGAAKIAGAIMCESYNIQYGTNFIT
                     LVLNNLYGTKANFDFGKSRVLPALLRKFHLAKLLSEGNITQILQDLKMNNFEEAKEYL
                     YNFGISEKSVEIWGIGKVRREFIHSDDLADAAIYTMQNIDFKDLIKDESKNTHINIGT
                     GIDYSIKEVALMVKNIVGFSGDLVFNASRPDSTMDRLMDCSKIHSLGWKHKIELEDGI
                     KMMYEWYKTQN"
     gene            complement(35154..35777)
                     /locus_tag="RTF91_000284"
     CDS             complement(35154..35777)
                     /locus_tag="RTF91_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943214.1"
                     /translation="MSDINAKALSLGVSDSSPWDLEMAQRGFKVIEYDASIEKCPYDH
                     ENIIFHKKFIGNVNNENTITLVQALKDNNLDESKPNILQCDIENCEWDMLENIDISIL
                     NKYFSQVIFEFHGCNPEEQDGVEKRISLLKKLNEYFVPIHTHFHNHGKIFYSQGLFFS
                     TTLEVSYLRKNLINLDIVKYRDVAGGFKNLDFPWISNPEIPIRFRGY"
     gene            complement(35770..36081)
                     /locus_tag="RTF91_000285"
     CDS             complement(35770..36081)
                     /locus_tag="RTF91_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943215.1"
                     /translation="MEKLLKELNNNIKLSNQLSYQILMSNIISNLDIDKKDKEILLLL
                     LQARDRNYIRINNNEQCYRNIVNYLNLIRPLELPLCDLLRIGGNGDGGYVMYNGGGGY
                     E"
     gene            complement(36085..36630)
                     /locus_tag="RTF91_000286"
     CDS             complement(36085..36630)
                     /locus_tag="RTF91_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HDZ4943216.1"
                     /translation="MTMDFNIEESKILKGVYIITPNKFRDLRGEIWTAFTDEHLSKLV
                     PDGIKFKHDKFINSHFNVLRGIHGDVKTYKLVTCVYGEVHQVVVDCRKDSSTYLKWEK
                     FIISHKNQQLILLPPNMGNSHYVSSKEAVYYYKLAYEGEYMDAPDQFTYAWNDERIGI
                     DWPTNTPILSERDILATKNKG"
BASE COUNT        13109 a         6216 c         4696 g        12632 t
ORIGIN      
        1 aaaaaaaata tgaaaaaaat attattttta ttttgttctt ttttattcgc atttgcaaaa
       61 ccaaatttag aaatacccaa actttcagat caagcaaaac aaaactttat tttaaaaaat
      121 atcaaattta accataatgg cacaatatat aaaattttta tagctaaaaa taaaaatgaa
      181 aacttaaatt ataaatataa aatcatttat ttgcttgatg gaaatgcttt ttttcctctt
      241 tttttaaatc tcttcaatac acctgttaaa gaaaatcttt taattgttgg cataggttat
      301 gataatgatt tagcttttga tacacaaaaa cgtaccaaag attatacacc tacagtaaat
      361 ctaaataaac aaggtggagg tagcaaagaa tttagaaatt ttttaacaac ccaacttatc
      421 ccttatatta ataaaacata ttccattgat cttaactatc aaatcctttt tggacattct
      481 tttggcggac tttttgccat cgatacactt ctttatgaca ccaagctttt tagccattat
      541 tttattattt cgccttcttt atggtggaat aatagtaatt ttttacctag tactataaaa
      601 ttacaaactt gtcctaaaat ttacattgga ttgggctcat tagaaataaa ttcaagtatt
      661 attaaaggaa tagctaagct caatgctaaa gaacttagcg aaaaaatatc taaagaaact
      721 acttgtaaaa ctcattttaa attttttgaa aacgaaacac atggaagcgt cacatctaaa
      781 gctatgctat ggatgaaaga gttttttaat cttaattgat cattgttttt atcattactt
      841 ttgccttaca atctgcgcaa caataaagag ttttaatttt attttcatca ttgccaaatt
      901 tagacttcat taaatttgct attttctcca cagctttttt agttgcaaat tccttaccgc
      961 attctacaca agcaaaaagt tcatcttttg ccatggtttg atactcaaaa taagaagccc
     1021 taaactccat tccactacgc acaagtttta aagtattttt ttcagcacaa cttaactcac
     1081 aatacccaca agtcgtacaa agagaagcat taaatttcaa agtattttct ttagcatcag
     1141 caattaaagc gccaacatta caggcaccca cgcaagaaag acaaagcgta caggtattag
     1201 aattgatttc taccctacca taacgcaacc actcgccact ttgtatgcta ccaaaatctt
     1261 catttgtgat cattttttgc attctttggg caaaattttc tcttgtggtt aaggtattgt
     1321 tatgaaaatc aaatttcaaa tcttgtatga attcttgctc tttcaaagca ttttgcaatt
     1381 ctttttcatc cttagcaata aaaatagctt ttttttgaaa ttttctctca aaaaaagtat
     1441 ttaaaagcat aatagcttca ttgctaccac gcgatacaaa atctgtataa aaaaccaaat
     1501 tagctccgct gctttgtaaa agtgctaaaa aatacatgga agaaagccat ttttcacctt
     1561 ctattataaa aggcaataca tcttttggta aaacaagatt taaattttct aaaggcattt
     1621 ttttaggaat aattaaaatt tttttatctt tataaaactc acaaagtgta aaaaaacttt
     1681 ctcttggcat aggagcataa tcaagcgatc cactaggaca cacactaata cacccaccac
     1741 aacctaaaca atccacttga gaaaattcta aatgtttatt ttcatcatct tttaaaatcg
     1801 ctacagtagg acaaatttcg gcacattttg cacaatgttc actgcgtctt tcatgatact
     1861 ggcatacact agcattataa gtaatataag ttttataatg ataatttggg cttttacttt
     1921 gcaaaaactt tagcaaggct tcaagatttt taaaatcgaa aagattataa catccacttt
     1981 gtcttgtaaa atctttacgc aaagcactta aatcctcggc tttaaaaagt aaaaaatcaa
     2041 aatccacttc catttcttcg ccttgatttt taaccacagc acaaagctca cccacactgc
     2101 caaaaacggc taaaatttct gcactactta aagcaataac cttaaatcca tgttctttta
     2161 aaaattctac agtttgagta tcggcatcca ctacaataag acgattttgc acttctttac
     2221 tttgttctaa atcaagtcct aaatcataaa cactagctct tacttcataa agcgttaaaa
     2281 catttttact ttgctctaaa atttcatctt gagaattttt aagataaaaa ttaatctcag
     2341 gagcataaat ttgcgccttt tgatttttat catttgaaat caatgtttct ttatcatttg
     2401 cttgatctaa aatttcaata gcgtcgggta aagggattaa aacatcattt tttatataaa
     2461 caaaatcttg cattatcttc ctcaatctct tttaaaacat cattttataa attctatgtt
     2521 aaaataacca aatattttct taaggcttaa gatgaacaaa ttgagaactt ttccacaaat
     2581 caatactctt atcgaagatg agaatttaaa atcctatcct ttttatatca aagcattttt
     2641 ttgtaaaaaa gttgtcgcaa aattaaaaga tgatttttct caaaatgaaa tttctaaaga
     2701 tgatttactt ttagaaatca agaaagaaat caaagctttt taccgcaaag atttacaaag
     2761 cgtgatcaat gcaagcggag tggttataca cacaaatctt ggtagaagtg taattcatga
     2821 ggaactttat aaagcgtgta aagatatact ttgtaattat tctaatgtag agtttgattt
     2881 agaaaatgga aaaagaggtt ctcgctatgc tttggtacta gaaaaactta aaatgctttt
     2941 tgaatgcgaa gatgctttag tggtaaataa taacgctgcg gcagtatttt tggtgcttaa
     3001 ttctctttgt tatgataaag aagtaataag ttcaagagga gaacttgtgg aaattggtgg
     3061 aaattttcgt atgcctgaag tcattaaagc tgcaggagta aaactttgcg aagtagggac
     3121 tagcaataaa acgtatttaa aagactacga acaagccatc aatgaaaaca caaaaatgct
     3181 tttaaaaacc cacaaatcca attttgccct tatgggtttt catagcgaag taaatataaa
     3241 agatttgcat agtttggcta aagtaaaagg gcttttaagt tattatgatc taggttctgg
     3301 ctggtgtgaa aatttaaatg aaaaactgat taaacatgag cctaaaatca gaaaactcgt
     3361 acaagaatgc gacattttaa gttttagtgg agataaactc tttggtagcg tacaagcagg
     3421 tattatactt ggaaaaaaag aacttataga aaagcttaaa caaaatcaac ttttaagaat
     3481 gttaagagta gataaactga ccttatcttt tttaaatgaa agtttaaaag cttatttgca
     3541 aaaagattat gaaaaaatta ttactttaaa acttttaaac gatgacttat ctttcataga
     3601 aaaaaaagct ttaaaagtgc aaaaagaatt aaaatttcaa actcaactta aaataagtaa
     3661 aagtttagta ggaggaggct cgatgcctga taaaagctta gatacttata tactagcttt
     3721 tcaaggaaat gctttaaaac tacaagctca atttagagat aaaaacatca taggacgcat
     3781 tgaaaatgat aaatttatcc ttgattttag aactataaga gaaaatgaac tacaaaaact
     3841 catttttaca atcaatcaaa tggaaatctt atgaaatctg ttattatagg cactgcagga
     3901 catattgatc atggaaaaac ttcactaatt aaagctttaa atggttttga aggtgatagc
     3961 ctaaaagaag aacaagaaag acaaatcact atcaatttaa gtttttcaaa tctcaaatta
     4021 aaagataaaa acatttcttt tatcgatgtt ccaggacata aagatttagt taaaactatg
     4081 gtaagtggag cttttggctt tagcatttgt ttatttgttg tagatattaa cgaaggctta
     4141 aaagaacaaa gcttggaaca tttagaaatt ttaaaaattc ttaatgttga aaataccatt
     4201 ttagtgctta gcaaatgtga tctttgcgaa aatataaaac aaaaaagcgc agaaatttta
     4261 gaagaattaa aaaatttaga ctaccctatt ttaaaggtat ttcacaccag tataaaaaat
     4321 aatcaaggta tagaagaatt aaaaaattat ttttatacaa tagaaaataa agaaaacgat
     4381 gaagaactta tttttcatta ttatattgat agagtttttt ctctaaaagg tataggaact
     4441 gttgttacag gtagtcttaa tgaaggaagt atcactttaa atgaaaaaat catctgttta
     4501 gacacccaaa aagaactcgt tgttaaaaat atacaaaatc acgatactaa tttagagcaa
     4561 atcaaagctt gcaaccgtgt agctttgagt ttaaattgtg actacaaaga attaaaaaaa
     4621 ggttatttgc taagcaaaaa aggttatttt aaaggcttta aagaatgcga taccttagtt
     4681 agagcaaaaa atttgcaaaa tagcaaaatg gttttttgcg tgggttcaaa acaaatcgaa
     4741 tgcaagataa atatattaaa agaactagga aatgatgaat tttttgtaca ttttagtttt
     4801 gataaaaata tatttttaag ttttgatgag gcttttgttt tattacaaaa taatcgtgtt
     4861 ataggtggag gtagagtttt aaatccttta agcgaacctt taaaaaaaga acaaaaaaat
     4921 aaatttttaa tgtttttaaa aaataaagat tttaaagctg ctttttcctt cttaaaagac
     4981 acgcacaaat acggttttgg cttgctttca agctatcaaa gatttaaact ctctcatcaa
     5041 aaagcattaa aattagcaaa agaattaaat caagtttttg ttgacgaaaa aaatcttaat
     5101 atttatcatt tacaaagttt ggaagaaatt aaaaatttca tcaaatttat acttgaaaaa
     5161 aatccttacg ctatgctttc agcacattct ttagctttaa ggattgcttg ggcaagtgaa
     5221 aatttttgcg aacttggact taaagaaatg tcaaattttt tggattttca aaatggaatt
     5281 tattttaaaa aaggtataga ttttgaaaaa cttcaagaaa aaaataataa cgaaatgtat
     5341 gaaattttaa aaaaacaagg catcaaacct gaagctcctt ataatcttta tgatttttta
     5401 gaacttgata gaaaaagtgg agataatata ctcaaaaaac ttactcaaaa aggcttagtt
     5461 ataagacttt cgtacaatct ttttatagaa aaacaagcac ttgaaaaact tatgcaagaa
     5521 tgtttaaatt tattaaaaaa tcaaagtctt gatgtacaaa gcatgaaaga atattttaat
     5581 ctttcaagaa aatatgctat tgcttatttg gaacacttag ataaatttcc tcaagtaagt
     5641 aaagaggctg aaaaaagatt tttaacaaac atttagaaaa tcattataga attaaataca
     5701 atttatatta aaggatttat aaactatgag aaaattaagt ttaattcttg cctattcagc
     5761 atctttgttt gctgcaagca attcagaaat tagtgatttt tattcaaaaa gcattaaagt
     5821 acaatttcca aatgctactg ttagtgtaac aaatcgtcaa aaagttggta atacaggttt
     5881 tgaaagcgtt attgtaagcg ttgaattaaa tggacaaaaa caagaaaaca ttctttttac
     5941 aaaagataat cttatcactc ctgatcttat tgatttaaaa accggaattt cttatgctca
     6001 agaatatgaa atgaaaaaat ttcaagaagt aagagaaaat tttacaaaaa atgctaaagc
     6061 tgtagcacaa aaagaaacta tggtaatatc tctaggagat aaaaataaac ctgcaattta
     6121 tgtcttttca gatcctgaat gtccctattg tagagaacat ttagcacaaa ttgaagatga
     6181 acttaaaaac taccaagtta attatatttt aactccagta catggcaaat ctgcttttga
     6241 aaaatcagcc ttaatttata aagaaacaaa aaaagcaaaa aacgataaag aaaaaattgc
     6301 gattttaaac aagtattatg atgcaaatat caaagactat ccaaaagtaa gtgatacaga
     6361 attaaaagaa gctttttctt tatatgaaaa ataccgctca ttaggtctta gtgctactcc
     6421 aattattatt aaataaaacc taatgtctaa atttacttta attttaaact tatttatagc
     6481 actctttatg agtgcttgcg ctaatacaac tttcatacaa agctccattc aaacaagcaa
     6541 tgaaggtatt tttatcaaat cacaaaaaca acaaagtttt aaaatttctt ttcaaaatcc
     6601 tagccaactt caaactaccc tggataaaga tttagcttta aaacttaaaa atttaggttt
     6661 aaaagaaaca aaagagaata cagactacga aattttaatc aatcttgtag atatgaaaaa
     6721 gcattcttat gctcaaaaaa ttacgacttc ggtaagattt ttttatgact tcgatccttt
     6781 agaaagcaat ggagaatgga tggtagaaaa ctactacatc atgcaagtta atttacaaat
     6841 taactctaaa aatcataatt ctcaaaaaac aagtcttatt gcaagaacaa cttatcttgg
     6901 aaataaaaaa cgctgtcaat tatctttgga aaataagatt ataaatcaaa taatgagttt
     6961 tttttatttt taacaaaata aaatcaaaag catgaaggct cttgatttta taaacattaa
     7021 gcaaaataag gtttgatttg ctccacccaa gtatcaattc ttgattcagt ttgatcttct
     7081 tgattatcat tgtcaagagc aagtccaaca aatttaccat ctacaaccgc atcacttgct
     7141 tcaaaagtat agccatcagt tgaaacttct cctactaagt ttgcacctgc attttttaaa
     7201 ttttgagcta atttacccat accaccacaa aaagtatcag aataactttc actatcaccc
     7261 ataccaaaca cagctacagt ttttccgcca aggctaagtc ctgaaaaatc aaaaccatcc
     7321 caatcatctt gcaaatcacc acttccccaa gttgaagttc cgcaaattaa tttatcataa
     7381 gaattcattt tagctgcatc aatatctgag atattaaaaa catcactaat tccaagtttt
     7441 gaagcaattg tgttagctgc tccttctgta tttcccatag cgctaccata gattactgct
     7501 actgacatta ttttctcctt ataagttgat ttgatatttt tacagaacta attttaacat
     7561 agttttgttt aaatcacaca aaaaatgttt tatttcaaat aaaatgtgtg aaatttttgt
     7621 tatgcggaca aacaatataa aatttttcaa aattattttc ttttatcaaa atttaacaat
     7681 ctatgaattt cattttcaat ttttaattat gtatattaac ctctttacaa agtggtaaaa
     7741 ttgcaaattt ctcatctata tatcataaga tcaccatttt gatctatatt tttttcacta
     7801 cttctaaaag aaatcttatc ataagcataa gaactaaata aaatttgcgt atcaaaacaa
     7861 ataccgtaaa aataaattct tataaagata aatcttttta gatattttgg tattaaaaat
     7921 caagcttttt tttgaaaata aaaagcatat atgcttggtg tttatatttt tgattttacc
     7981 aaatgaaaca tgcattaatc gtataaaaaa tttctaaata tcatttttaa actcttagta
     8041 tttcttgcgt aaaagaggaa ttcttaaggt atcatcaaca cttgcattat attgagctta
     8101 aaaaaatcaa catgagttct tgatcactta aagagtgata aactggggta taaactcttg
     8161 tctatcatta aacccaaata acattcttaa cctttataac aagaaaattc tttattaagg
     8221 ttaaaaattt tacaatattc acaatacaca caacttacac ttctttttgc gcaaactaat
     8281 ggaattttgc gttttttagc ttcatttttg atttttttca tagtgttatg atttaaaaaa
     8341 cttgttaaca tcactataca ttctgtatca caaggaatcg gcttgcgatt aactctattc
     8401 tcattacgcg catcccaatg ttctattttt ttagcaccta aatcatgcaa aacagctcta
     8461 ataggagtga tttcatctgc accaacaacc aaaactgaca taaattctcc tttgtgattt
     8521 ttaaaatata ttttgataat tattattata atataaaaaa ctaaatttat tttgaaattt
     8581 attattaata aagcaaaatt attcagttaa ttttaatttt tataagatat aatttactaa
     8641 ataataaaat ttattaatta ggagaaaacc aaatgaaaaa attaaccaat gacttcggaa
     8701 acattatagc cgataaccaa aattcattaa gtgccggtgc aaagggtcct ttgcttatgc
     8761 aagattacct tttacttgaa aaacttgctc atcaaaacag agaaagaatt ccagaaagaa
     8821 ccgttcatgc caaaggaagt ggagcatatg gggaaataaa aatcactgct gatttatctg
     8881 cttatactaa agcaaaaata tttcaaaaag gagaaataac tcctcttttc ttacgttttt
     8941 caactgttgc aggtgaagca ggtgcagcag atgctgaacg tgatgttcgt ggatttgcta
     9001 ttaaatttta caccaaagaa ggaaattggg atttagttgg aaacaatact ccaacttttt
     9061 ttattcgtga tgcatataaa tttcctgatt ttatccacac tcaaaaaaga gatccaagaa
     9121 ctcatttaag aagtaacaat gctgcttggg atttttggag tttatgtcct gaaagtttac
     9181 atcaagtaac tgttcttatg agtgataggg gaattcctgc aagttatcgc catatgcatg
     9241 gatttggaag tcatacttat agttttatta atgataagaa tgaaagattt tgggtaaaat
     9301 ttcactttaa aacccaacaa ggaatcaaaa atcttaccaa tcaagaagcc gctgaactta
     9361 tagccaaaga tagagaaagc caccaaagag atctttataa tgctatagaa aataaagatt
     9421 ttccaaaatg gaaagttcaa attcaaattc ttgctgaaaa agatatagaa aaactcggat
     9481 ttaatccttt tgatttaaca aaaatatggc ctcatagtct cgtgcctttg atggatatag
     9541 gtgaaatgat cttaaataaa aatccacaaa actattttaa tgaagttgag caagctgctt
     9601 ttagtccaag taatatagtt cctggcattg gctttagtcc tgataaaatg ctacaagcta
     9661 gaattttctc ttaccctgat gcacaaagat atagaatagg aaccaactac catcttttac
     9721 cggtaaatcg tgcaaaaagc gaagtgaata cttataatgt cgctggtgct atgaattttg
     9781 acacttataa aaatgacgcg gcttattacg aaccaaatag ctataataat agcccaaaag
     9841 aagacaaaag ctatcttgaa cctgatttat ccttagaagg tgcagtccaa agatacgctc
     9901 cactagataa tgacttttat actcaaccaa gggctttatt taatcttatg aatgaaaatc
     9961 aaaaaactca actttttcat aatatcgcct cttccatgga aggagttgat gaaaaaatta
    10021 tctctagaac tttagagcat tttgaaaaaa tttcacctga ttatgcaaat ggagttaaaa
    10081 aagctttaga aaaataattt ttacttgcca ttttttaatg gcaaactaaa gattataata
    10141 taaggaaaaa caatgacaac tcttagttta gaagaagaaa aaagatttga agaactttgc
    10201 aaaatggctt ttaattttgc aagaaatgac gaatgtgaga atcttaaaat catgatagaa
    10261 gcgggtttaa atgtaaattt aaaaactcat aaaggcgaca ccttacttat gcttgcagct
    10321 tataataatt cttatgaaag cgctaaaatg cttttagaaa aaggtgcaaa agtagatgaa
    10381 aaaaatgatc gcggacaaac cccattagca ggagtttgtt ttaaaggata tttacccatg
    10441 tgtgaacttt tagttaaaca tggtgcaaac attgatgaaa acaatggttt aggaatgacg
    10501 ccttatactt ttgctattat gtttggacgc aaagatgtgg cagaattttt gcttaaaaaa
    10561 tctaaaaata attttttaaa gaaaataagc ctaaaaatac taaaatttat aaaaaaaatt
    10621 taattatttt ttaaattttt tcagatacct ataaacacta ggttctgaaa tttttaaaaa
    10681 ttttgctaca attgaaaccg atccttttat attaaaaata cctttttcat atagcttttc
    10741 agcgatttct tctttttggg tgatacttaa ttgatagtca gaatttaaat aactagcatc
    10801 tacactttgg gctaaaatat cctctataga gtgacttaat atttctatat ttgaatcatt
    10861 ttgagaaaaa ttaatgtttc ctaaaatttt acccatattt ccaatttttt ccaaatcaac
    10921 catcttgcat attaaatctc tcataatgct agtatcatga ttaatacaca aaatacccac
    10981 caatctatca taatttttaa taaaaaaagt agatcctcta attaattttg actttccaac
    11041 aagagcctta taatcactta aaaaatcttt ttctaaatat tttttatttt gtataagctc
    11101 acttgcaaaa gcagttaaag gagaatctaa atttcttcca ctgatgtgac tattggcaat
    11161 tgctgcaata caagctccat cctcagtaat cacatgaaaa actatctcat attgctcacc
    11221 taaaacttct cctaaaaaat atgtcaactt tataaactgt tgtttttgcc cttcattcat
    11281 aaaactgcct tcaataaaaa attaatataa tattaaattt tactctttat actttaaaac
    11341 atttcttaat aataaaattt tattattata ataataaact attgacaaat tattattgta
    11401 gtgataaaat gcattctgtt tgatctatat ttaacaaagg agaattcatg tcaaactatc
    11461 caaaggccat cggtccatat tcagcttata aagaagcaaa tggattttta tttatatcag
    11521 ggcaacttcc tattaaccct gcttcaggag aaatagaaag ttctgatatt aaagagcaaa
    11581 ctaaacaatc tttaaaaaat attggcgcta ttttagaaga aaacggtatc agttatgata
    11641 aggttattaa aaccacttgt tttttagctg atatcaatga ttttatagca tttaatgaaa
    11701 tttatgctga attttttaaa gccccttatc cagcaagaag cgcttttgca gtaaaagatc
    11761 tgccaaaaaa tgctaaagta gagatagaaa tcatcgctca aaaaggataa aatatgctag
    11821 gcattgtttt ttctttattt agcgtttttt tacttgtctt tacgctttat aaaaaaatca
    11881 atgctcacat ggcattactt ttaagcagtt tgctttcctt agttttcatt tttagacctt
    11941 ttccacacat tgtcactaaa gattctttaa atttaggttt ttttaatatt tttcaagttt
    12001 tcgatcaaac catgtcaagc acattagcag aacttggact tacactgatg actgtgctaa
    12061 gtttttcttc ttatatggat catataaggg cttcttatgc actttttaaa gtttttgaaa
    12121 agtctttaaa aacagtaaaa tttccttatg ttttacttat cattgcttat tttatcgtgc
    12181 aatttttagt tctttgtatc ccttctcatg caaattcact tatagtttgt ggtaaagtat
    12241 ttgcaagtag tcttttatct gtaggttttg tagatacttt aatagaattt tgtaaaaatg
    12301 caggatttgg aattctagct attatcacag tttcaatctt gcttgcagtt tgtacttttt
    12361 taataggttt agaaagtgcg gcattctttg gctttgctcc acttatccta aatatagcaa
    12421 aatattttag agtagaaact accactataa taacaccaat tcaaatcata acaggtttta
    12481 aagatgtgtt agtcctatat tacaccagca atcttagtgg ttttagctat tcctatgctt
    12541 gtagcggcta ttgtaaatgt tattatgatt tatatctatc tttaaaaagg agaaaaaatg
    12601 aactcaaaaa ctaaacttat tcattgtggt agaggcgatc aaggtgctga aataagatca
    12661 gtcaatccta cacttatgcg tgcatcaacc atacttttta aagatcacac aacttggcaa
    12721 aaatacaaaa aattaagaaa aacagatcgc gttttaagtt atggtgctag aggaacaaca
    12781 actaattttg aacttgaaaa acttatctgc actctagaag gtggatatag agcacaactt
    12841 ttcccaacag gacttgcagc attagctatg gtacttttaa actatgcaag caaagatgca
    12901 cattttttaa tcactgatgc aatttatgga cctgtaagaa caatttgtga attattttta
    12961 gccaaaatgg gtattgaagt tgatttttta aaagctgatg caagcgatat agaagaaaaa
    13021 atcaaaccta atactaaact tatcttatgc gaaagtccag gttctatact ttatgaaatc
    13081 atagatttac caaagctttg caaaatcgct catgcacaca atataccagt agctattgat
    13141 aatacttatt ctagtggata ttttttaaat cctttagagc ttggagtaga tatttcagtt
    13201 attgctgcta caaaatatct tagcggacac tctgatgtaa ctatgggcat agtagtaatt
    13261 aatgaaaaag aatggaaaaa ttttgacaaa cttccagaaa ttctaggttt tacaacaagt
    13321 cctgatgatg tttacttagt acttcgtggt atgagaacac tagatgtaag aatgaaagct
    13381 catgaaaaaa gtgctgatga aatcgtagaa tttttacaaa gcagaaaaga aattaaaact
    13441 attttctatc caaaactcaa gtcccaccca aatcatgaaa tttttatgcg cgatcataaa
    13501 ggggcaaatg gtatgattac catagaattt acagaaggtt atagcaaaga tgatgctatt
    13561 aaatttgtag ataaattaga atacttttca ataggcgcta gttggggtgg ttatgaaagc
    13621 ttagcaactg taactactcc acctagaact gcaacaaatt ggagcacaag aggtccattt
    13681 gtaagatttc atataggtct tgaagacacc aaagatttaa ttgctgattt aacacaagct
    13741 tttgatagta tcaaaaaata aggagataaa atgacaggaa ttagcgtatt tgatcataga
    13801 ctactagcag attcatggag cacacaagat atgcgtgcta ttttttgtga gcaaaaccat
    13861 atacaaaaat ggctcgatgt tgaagcagct ttagcaaaag cacaagcaaa actcaaaatt
    13921 attcctaaaa aagcagccga tgagatcgca aaaaaagctc attataaatt tatggatatg
    13981 gattttatct ttgctgaatt taaaaagact aaacatactt tagttcctac cgtaagagga
    14041 ctagaaaaag cttgtgataa taatttaggt gaatatgtgc attttggagt aaccactcaa
    14101 gacatcatcg atacagggct tgttttacaa tttaaagaag ctatgaatct tgtaaaaagc
    14161 gaattaaaag ctattgcaaa agccttagca aaattagcca aaactcataa aaataccgct
    14221 atgatgggaa gaactttagc acttcaagct ttacctatta cttttggaca taaagtggct
    14281 atttggctaa gtgagcttga acgtcatttt gaaagaatac ttgaacttga aaaaagactt
    14341 tatgtaggta gtatagtagg tgctgtagga actaaagcaa gcttaagtga tcagtgcaat
    14401 gaagtagaaa agctcacttt agaaaattta gggcttaaag tacctaatat ctcttggcaa
    14461 agtgcacgtg atcgctttat agagcttggt tttgtgctag gcaatatcaa tgcaactttt
    14521 aacaaaatcg ctcatgaaat tttaatcctt tcacataatg aaatcgatga agttgcagaa
    14581 ccttttggca aaggacaaat aggatcaagc actatggcac ataaaagaaa tcctgcaata
    14641 agtgaaaatg cagttacagt aagcaatgcc tttaaagcaa atttagccat cttaagtgat
    14701 attgaaagac acgaacatga aagagacggt caagtttgga aaatggagtg gaaactttta
    14761 cctgaaatgt ttttaatgct ttctgtagtc ttagcaaaca tgaaatttgc tcttagtaat
    14821 ctagaagtaa aaaaagataa aatgcttaaa aatttaaata ctcttaatgg ctttgtttta
    14881 gcagaacgtg ttatgtttgc attaagtgat cattatggaa aacaacatgc tcacgaaatt
    14941 gtttatgaaa atgctatgct aggcattgaa aaacaaaaaa cctttaaaga agttttactt
    15001 gcagataaaa gagtgtctaa agtattaaaa gaaaaagaaa ttgatgcttt gcttgataca
    15061 acaacctatg taggatacgc gccaaaactt gtagatgaat ttttaacaaa aatcaaaaat
    15121 agcgccattt taaaataaga aaaatgatgt tctatagtga aattttagcg gattttattt
    15181 tcgatcttaa acataaaaat atcccttata gttttgttta aagagcttaa taggcttgga
    15241 acagctatag cagcaagcaa aaaaatgctt taaacgcttt aagacttttg aaaatttaaa
    15301 cacagaaaaa aatacgtcta tttgagcaaa tgatcaaaaa ttagtagtta tttaatggta
    15361 ttgcttctca tacgctagat ttgatgatac gcatacaaaa cgttttgtat gcgtgtgatt
    15421 taactccgct ttgtttaagt tataagttct cacattagca aagacgcgag aaaaatcatc
    15481 aaagctttta ttgttaacta agaagttgca gctagagtgg gtgttgcaag caaaataaat
    15541 gagtttttat ccaatggttt taaagtttac atattgccaa tgccattaaa aacggtatca
    15601 tagtagctca ttttgccaaa aacaacataa gtggatttaa catttttgaa gatagaaata
    15661 atatttttaa atgttttggc atagaacaag aacgtgagaa aacagaactt aataaagcct
    15721 tgagtgaaat ttggcagacc atacaagttt caatcaaacc ttatcatttt gctcacgggt
    15781 tatgctattc tttaaaaaat gatgtttaaa gcctgataaa agcattcgtt attttgtaga
    15841 tgaagtttct attttttacc tgcgatcctt tggaagcaaa atatactcta aatagtactt
    15901 ataaagctaa atttttagca aatacacaaa tttatcttac aataccaagg ctaaactttg
    15961 cagtaaatac agttttttcg aaagaaagca gaaaactaaa atacgctttc tctttctttt
    16021 tatttgcata agtatagtag cgtttataag acttcatatt gcttaaattt atataaatta
    16081 acttgttttt aacgatgaaa ttttagcaat attatcctca aaagccttta aaatactata
    16141 agcaattcct tcaaaatcaa gcccaccgca aagatagatc aaagtcatac gaaaagattt
    16201 actcacatca agctttactt tttcagcatt gatacttagt ttaaaatcat agggacttgc
    16261 atgcttaaaa gcataatttt ttgccgcaac taaaaaatca ttcttatctt ttaaaaactc
    16321 acccttaacc aaaagaaaat taatctcaag atatttccaa aaatctttcg aagatataga
    16381 attttcatca aaattttgct ctataaaagt atagtttctt tcaaaagatt ttttataatt
    16441 ttctacaagt aaagtcccta atttgttttt agctatattt tgtaaaataa gttttatatt
    16501 gctctcaaat tcaaaatttg tttgttctaa aattttaatt tgatcttcta agaaaaattc
    16561 ttgttttaat ttttcattgt aaagcttggt ataagaaaaa atatttgcca taggcttttc
    16621 ataattccca aactcatccc aaaaattttt ttcactacaa gctatacaaa tgtcccgcag
    16681 ccaccggcca agaagttttg gcattaaatt tcactttagg gcagctatta taagtataag
    16741 gtcctttgca gcctatctta aataaacaag ctccattctt tgcagtctca tcatcaaaac
    16801 gttctgcgaa aattccactt tcaaatttag cctttctttc acacatatca tgcaaacatt
    16861 taccataagc ccacacagga cggttttgct catcaagctc aggtaaaact ccaaataaag
    16921 caaaaaaact taaggttgca atgatattga tatcacttgg cggacaacct ggaatattta
    16981 ctaccttttg gcttaagact tcactaatac cgcaggtttt gctaggattt ggataagcag
    17041 cttgaatacc accgtaactt gaacaagtgc ctaccgcaaa gatagcctta gctttagcgg
    17101 ctaatttttc taaaatttca tacccactct ctccttgtat tcctaaggta agaaaaaagg
    17161 tatcaattgc tgccacaccg ccttcaactg ctaaaataaa atcttcttct aaaacatgtt
    17221 ctaaaagttc ttcagcctta gtaccattag ctagcattaa agtttcatga tattctaaag
    17281 aaaaaaaaat caaaaatcaa ttcatcaaaa cttggcaact cggaacgcaa caagctctca
    17341 ctacaccctg tacactcaca aagatgaagc catactaatt ttgttttagg tgcaatttga
    17401 aaaaatcttt gagcaagaac tggaatttta ttacccaaag atagatgcct agcaagaatt
    17461 tttacacttt cttcattgat aattttttca tcttttaaag tggaaatttc aagtttttta
    17521 atacgatctt caagtatatt ttttaattct tcattgccaa gctttgccat attttttatt
    17581 ctttttgatt atcccaacaa agaacagttt gcccttcttt attcttttca acatcaccca
    17641 tacccatgat attatatcct gcatccacat aatgtatttc acctgtaaca ccatgtgcca
    17701 aatcactaag taaatacatg gctgaatttc ccacatcttc tatactgaca ttacgtttta
    17761 acggagagtt gatttcattg tattttaaaa tcattctaaa atcccctatt ccacttgccg
    17821 ctaaagtctt aataggacct gctgaaatag cattgacacg aattcctttt actcctaaat
    17881 ctcttgctaa ataacgcacc gaactttcaa gtgcagcttt tgccacaccc ataacattat
    17941 aatgaggcac atattttact ccaccaagat aacttaaagt caaaattgaa ctattatctt
    18001 ttaaaatagg taaaaccgca cgtgttaaag aaagcaaaga atacacagaa gtttgcatag
    18061 ctatatcaaa tgcttcttta gtggtttcta aaaaagaatt ttctaaagcc tcttttggag
    18121 caaaagcaac cgcatgcacc acaaaatcaa tctgacctaa atcttttttg attttttcag
    18181 caatagaatc taaatgctca ttgttattta catcaagttc ataaacaaat ttagagccaa
    18241 actcttctgc tataggttct acgcgttttt ttaaggcatc gtttaaaaaa gtaaaagcaa
    18301 gctcggctcc ttgatcaaaa cacgcttttg ctataccata agcaatggat ttattatttg
    18361 caacccctac aataaggcct tttttaccct tcataatcat cttttatcct ttgattaatt
    18421 ttataaaatt ttctactttt aaagccgcag agcctatcag aactccgcca cattgtttta
    18481 cactcaaaat ttctttgata ttattttcat tcacacttcc accgtaaagc aaaggtacct
    18541 tagttaaact tgctaaaaat tcaagcactt ttgtaatatc cttactttct gcactcaccc
    18601 ctgttcctat agaataaata ggctcataag caatgattag cttttcataa tttaaatcaa
    18661 tgatttgaag ttgctttttc aaaaactcta aagttttgcc tgaatttttt atatctaaat
    18721 tttcgcctat acaaaaaaca attttataat catgctcttt agcaaaatca aatttagctc
    18781 tgataagctc ctcatctcct aaagctcttc tttcagaatg tcctatcaaa agacacttga
    18841 tcccaaattc atccaaatgt tcttttccaa gctcacctgt aaaagctcca ttaacacaag
    18901 gataaaaatt ttgtgctcct tgtataaaat gagtctgact ttctaaaaaa gcgatactag
    18961 gaggaaaaac gataatatca tcggactttg ctcccatagt tttatttaaa atttcagcat
    19021 aaattctaaa acttgctctt gtatgattac attttaaatt tgcagcaaat atcattcatt
    19081 ttccttagat cttaaagctt ttacacctgg aagctcttta ccctctataa gttcaagaga
    19141 agcaccgcct cctgtagaaa taaaagtcat ctcatctgca tcacctgcac gtgcaacaac
    19201 atcagctgta tcaccgcctc caacaacaga agttgcatga ccttcgctaa tataatggct
    19261 cattttaata ctgccttttg aaaatttatc aatttcaaaa acacccatag gtccattcca
    19321 ccaaatcgtt tgagcatcag aaattacctc tttaaaaagt ctaacactcg caggtcctat
    19381 atctaaaccc atccaaccat ttggaatttc ttgcgctgga acaaatttca tcggagcatc
    19441 ttgtgaacac gcaggagcag ccacaacatc tactggaaga taaattttta ctcctaaatt
    19501 tttaccttta gtaagaattt tattggcttc ttctaaaagc tcttcttcta aaagtgaatt
    19561 tcctatatca taaccttgtg cttttaaaaa agtaaatgcc atcccacctc ctatgattaa
    19621 tttatctacc tttggcaata aattattcaa tgcttgaagt tttccactta cctttgaacc
    19681 tccaacaaca gcaacaaaag gacgagctgg gtgcttgata agattacttg caaaatcaat
    19741 ttctttttga agtaaaaatc ccgcaccttt atgtttttca tcaaataatt tagtaatagc
    19801 ctctacacta gaatgcgctc tatgacatac tccaaaagca tcattaatat aaacttgagc
    19861 cataaaagca agttctttag ctaaattttc atcgttttta atttcacctt tttcaaagcg
    19921 taaattttca agaaataaaa tttcacccgt ttttaaattc atagctttag tttttgcatc
    19981 ttcacctata acatcttttg ccataataac ttctttatct aaaagtctag caaggcgttt
    20041 ggctacaggt tctaaagaat acttagaact gatttctttt gggcgtccta aatgagaagc
    20101 taaaattaca ctacaaccat tatctaaaca atatcttatc gtaggaatag ccgattttat
    20161 gcgtctatca tcggtaatat ttaaaaaatc atcttgggga acattaaaat cacatcttat
    20221 aaaaactttt ttctttgtta aatcaatatc ttttatagaa ataatatcac tcattattaa
    20281 gccttatttg cagtgtatac tgccatatcc actagacgac ttgaatagcc ccattcatta
    20341 tcataccaag caattatctt aataaaatca tcagcaatca cttgagttaa atcgcttgcc
    20401 acaatagcac cgtaagaaca agtgataaaa tcgcttgaaa ctctttcatc atcatccacc
    20461 attaaaatgc cttttaaatt tgtagccgca gcttttctaa aagcattatt aatttcttct
    20521 ttactaactt tacgacttag ttgtgccgtt aaatccacac ttgatacatc aataacaggc
    20581 acacgcatac tttgtccatg aagcttgcca ttaagttcag gcataacaag tttcatagct
    20641 tttgccgcac ctgtagaagt tggaatgata ttttgtgctg cagcacgaga acggcgttta
    20701 tctttagcct tagcatcaat aatactttgt ccatttgtat aagcgtgtat cgttgtcata
    20761 agcccttttt ctatgccaaa attatcttgc aaaacacggc atacaggacc taaacaattc
    20821 gtcgtacaac ttgcattaga aatgatattt tcacccttat aaagttctga atttacccct
    20881 aaaacataag taggtgtatt atcttttgca ggggcactca taatcacttt ttgcatcccc
    20941 atatccaaaa attcttgaca ttttgccata gttaaatgag cccctgtaca ctctaaaaca
    21001 atttgtgcac cgtattttgc aaagtcaaga tcttttacat tgcgactttt aaatactttg
    21061 atttttttac cattaatcac caaatcatcg ttctcattat caacactacc tttaaattca
    21121 ccgtgtactg tatcgtattt aaaaaggtat tttgtaagtt caatatccgt agtatcattt
    21181 atcgccacaa tttcaatatc atttctttct aagataattc ttgcaacaca tcttcctatg
    21241 cgtccaaaac catttatagc aacttttaca gtcatttaat ttccttttgc aaaatataat
    21301 gttaatattc tacaaaaaaa aggttaaaaa ttttaatgaa aatagcactt tttggcggta
    21361 gttttgatcc gccacataat ggacataaca gcgttgtttt agaggcttta gaaaaattag
    21421 acatagataa acttattatt atgcctactt atattaatcc ttttaaacaa aattttagtg
    21481 ccgatgaaaa acaaagattt ttatgggtaa aaaaactttg ggggcacttg ccaaaagttg
    21541 aaatttgcga ttttgaaacc aagcaaaaac gtcctgttcc tagtatagaa agtgttaaat
    21601 atctttataa actttataat cctaataaat tttatctttt aatcggtgct gatcatttgg
    21661 aaaaactgca tctttggcat gattttgaaa aactcaattc tttagtagaa tttgttatca
    21721 ccaatcgtaa tgatatagaa attcctaaaa attttaaaga tttaaaaaca gataaaaaaa
    21781 tcgcttcttc ttttatacgc aacactttaa acacaaatga agtttgcgaa gaaattaaag
    21841 acgaagtgaa aaaatattac gaaaaattac aaaaaaattg atacaatttc aaaaattaaa
    21901 taaggaaaat catgcaagaa agaatagatt taatcgttaa aattttagac gaaaaaaaag
    21961 cagaagacat taaaaccatt gatatgagtg aacaagaata ctttgtaaaa tatgtcatta
    22021 tcgcagctac tttaggagaa agacatgctt tatctttaat tgatgaactt aaaacaaagc
    22081 ttaaaactaa aggggaggaa tttataaaca tagaaagtag cgaagaatgg agcgtgattg
    22141 atcttggcga tattttaatc catcttttaa cacctaaaca cagaggaatt tataatatag
    22201 aagaattact agaaagtctt aaaaaaagca gggtttaaaa aaattaattt gattggcctt
    22261 ttaatttaaa aattcaatac tcttttgatt cttcttaaaa taattttaaa tcgcgaaaat
    22321 attatctcat caattcttaa agtctagctt ttatctcatc aaataaagca aataccatcc
    22381 tttcaagctc ttttgcttgc tctaaagaat tagcttcaaa acgcgttatc aaataaggac
    22441 tagtatttga agcacgtaac aatgcccaac cataaccaaa atctacccta gctccatcga
    22501 tttcacaaag acttttaaca ccttttaaag ctcctttttc aaccgctttt tgaaattctt
    22561 caacaagctt aaatttttct tgttcgttaa caggaatttt aatttcaggc gtagtataaa
    22621 gttttggtag agctttaatc atgctttcta aatcaaaacc tttataaaca agctctaaag
    22681 ctcttaaaaa tgcataaatt ccatcatcat aaccaaaata tctgtgttta aagaaaatat
    22741 gtccgcttac ttcagctgct aaatcaatat ctttttcttt catcattttt ttaatattag
    22801 aatgtcctgt ttttcccata aaaatagtac caaatttcgc cacttcatca aaaagatttt
    22861 tagaacattt tacttcacct aaaatgcgtg gattggggat atttttagca aataaataac
    22921 aaagctcatc tccacaaaat acatgagttt tacttaaagt aaccactcta tcagcatccc
    22981 catcaaaagc aaaggccaaa gaataatctt gattttgatt taaaaattct ttaattacac
    23041 ttaaattttc ttcttctgta ggatctggcg catggtttgg aaactgtcca ttaggttctg
    23101 caaacattac atgtgctttt aaatttaaag ctttgattaa aggctctatt actactccag
    23161 ctgcaccatt tgtgcaatca atagcaaatt tataattaaa atcttttaaa aagctaaatt
    23221 gttcacacat aaatttcaca taaagactta aaatatcgta tttttggact tctaaatttt
    23281 cttcaatctc atcatctaaa tgcttataaa cttcttttga aaactctttt aattctacac
    23341 caaaaaaact ttctttattt atagtaatct taaagccgtt atagtctttt gggttatgag
    23401 aacctgttat cataatattt gcatcaaatt ttaacccctc ataaaggcta aaatatccta
    23461 gcggagttgg cacaagccct atatcataaa cttttatccc tgctttgtta agcccgctaa
    23521 ctaaataatt aaaaagctca tttgcactat atcttgcatc ccaacccaca cttacatttt
    23581 tacaaccctt atttagcata gtttgtccca aacaaaaacc tatagcctta acgctttttt
    23641 cattaagctc tttaccataa agtccgcgta tatcgtattc tctaaaaatc acatctaaca
    23701 tttttttcct taaggtcatc cttttttaat ctaaacttat cgtttttata aagtaaattt
    23761 ggatagaaaa gaaatttttg ctacaatttt acattaattt cactaaatga aggaaaattt
    23821 atggatgatg aattagaaaa tgaagaaacg aaaaagaaaa aaggtggttc acttgtaatt
    23881 attattgtta tattactttt tgttttactt cttagtatta tgggagtgat tgcctggctt
    23941 atttcaagta gctcaagtga tgaaagtgaa gtcaaagaag ctccaaaaga agaagcaaaa
    24001 gccgacaaac ctaaagtttc agctcctact cagcgaggta gcgattttgc taatataggt
    24061 cctatgtatc cacttgatcc ctttacctta aatttactta gtgatagcgg ctcaagatat
    24121 gtaaaatgta ctatagaact agaacaaaat agcgaacttt taaaacctga acttgataaa
    24181 aaagtttcag tgattcgtga tattattatt cgcgtattaa cagctaagac ttttgaggaa
    24241 gtaagcacgc aaaaaggtaa agaacgctta aaagatgagc tagttggaaa aatcaatgaa
    24301 attttaactg atggctttat taaaaatatt tattttacag attttgtagt ttcttaaatg
    24361 cgtgtaggct gtgatatcat cgccatttct aggatagaaa aaattcattc tagaaatggc
    24421 aaaaattttt tagataaatt cctaaaccca aaagaacaaa tgcttattaa aaatccagca
    24481 accctagcag gtctttgggc tgccaaagaa gccgctagca aggctttagg tgttggaatt
    24541 tgtgaattat gcagtttttt cgacattgaa atatcaaaag atgaaagaaa cgcccctaaa
    24601 ttaaaatatt ctcaaaaaat tgtaaaagat tttaatatca ctcaaacttc tctaagcatt
    24661 tctcatgata atggttttgc tatagccata gtggctatag tttgatttat tttcctatag
    24721 tttgtttatc taaatttctt gaaagtatga aatctactac aggttgttct cttttatttg
    24781 ctcttttgca atgatctttt tgaaaaaaat ctgtgatttt tataacaatc cttgcccatt
    24841 ttttgtgatt tctttcacgc catgcatgag aagaaacgct ctcccaagca taaccattaa
    24901 acaaacttgc atttacaaaa tgatctaagg ctctaacacc ctgtcttgct cgtgcggtat
    24961 tgaaaaaagt tcccataatc acgataaaaa gatatcccaa aactgccaat ggcactatag
    25021 cacaaagtag aatagtccct gccaattttt ctttcaagct tccttttaaa gtgcgtttta
    25081 cacagcggcg aaaattgaca cgaattctag ttctaactct tttcatagtt ctcttttact
    25141 aaattttatc ctcataccat tagccgaacg tactgttaaa cgccctacta catcaggtaa
    25201 aaaaccttct tcaagttcta gtttataaac ttttaaaata ttagctaaaa tcaaaattgc
    25261 ttcttgcata gcaaaacctt gtcctataca aattctttcc cctactccaa aaggcaagta
    25321 agcatctttt ttgtattctc cttcaaaacg agaagggtta aatccatgtg gatttgtcca
    25381 aaatttctca tgtctgtgta taagccaagg agcaatcact actccagaac ctttttttat
    25441 aagtttatct ctaacttggg tatctttttt cgcttctctt gcaaaaaatc caacaggagg
    25501 ataaagtctt aaagattctt taaaaatatt cgttaagtat ttaaactgtc ttagatgtaa
    25561 aatttcaatg cctccacctt gtaaaacctg tataatctct tcataagctt tttcttgttc
    25621 cttaggataa agactaagca aataaagcgt ccatgtcaaa gaacttgctg tggtttcatg
    25681 tcctgctaaa aaaagcatgg ccacttgatc taaaatttct tcaaaagaaa aacgcttatt
    25741 tgtattcgca tctaccacta aaagcaaaga acctaaaata tcttcaaatt ctgcattatt
    25801 tgccatatca tatcttggtt ttataatatc acttaaaatc tgcctgatca catctcctgc
    25861 tttagcacgc ttacgatcgc ctaatacata agaaagccat tttggaaaac aaaacatacg
    25921 acgcatagct gtatgcacgc tttgctcttg aaaagtcgca aaggcattta agattttttt
    25981 gcccttttct tcatcaagct ttgaagacat aatagtacga aaaatcacat cagcagtaat
    26041 aaaagtcatt gcttcatcca cttcaataat agcatgattt ggacacttct taaaacgttc
    26101 catcatatca gttacagctt cactcatgag attaaaaact ttattaatgc gagtcatttc
    26161 aaagcttgga cgcaaaagtt ctctttgttt tttccaaact tcaccatttg tagtaaaaat
    26221 actctcccct aaaagtggac ttaaaagttc atgtaaaaac tcacttttag gaaattctct
    26281 aacctcatca accatcattc ttttaacttc tttagtatca ttaatcacat aaagatcaaa
    26341 atttggcatc ttcacatagc ctgtttgcat tttataacta cgctcataaa gcccgtcaag
    26401 ccaagatcta cgttttaata aaaaagttaa gagcgtagaa gctttatttt tataaggttt
    26461 tggaaaaaag ggacattcac tcatattttt accttttctt ctaaaaattt aggcattatg
    26521 ataaaagaaa aaaaatcata atcaccttta acaccaatgc tataaagata taaaaaatgt
    26581 gctttgtttt tatctctttt tattttttta tactcatgtt tttcatataa agtgtgaaat
    26641 ttagcactta aaaatagagg tgtaaattta gcatctacgc cacttgtgcg gaaaaaatct
    26701 acttgaggaa aacatgctcc atcaataatc gatgtataat cataccattt taaatcaaac
    26761 tttgaaacaa attcaagctt ctttctaaat tcatctgctt ttttctgata acttactaaa
    26821 gggatacatt ctcctagggt aagaattttt aatttatgaa gtaaagatgg atctaaattt
    26881 tgtcttaaaa gatactctaa aacttctata caaactatag ctccaacact atgtgctact
    26941 aaaataagct cataatcttg tttattttca ttttgtttta acttatccac tatagtgttt
    27001 gcaaaaagct tgattctttc ttgcatagca cctatttttt tatcttgcca agtagcacaa
    27061 aaagcacaaa ttcttgctat ccaaaataca gctaatttct tacccaattt aaataaaaaa
    27121 tggttaagta aaaatcctaa aaaacatcct ataatgatag ctaaagaaaa atgcatataa
    27181 ttttgtaaaa aagcaaaact tcccaaagct aaagtcaaag aaaatatcaa agaaaacaat
    27241 acataaaaaa aaggataata acctgtgata agttgataaa tcgactctct accaaatttg
    27301 ataaaaagcc ctgtgatagt ataaattcta aaaaaactat aacaatctgc taaagcatct
    27361 ttataatttt ctgaccaatt tttcttaaca atatcattcc atgttaaaaa atgatattta
    27421 gtttgcacgc tttcgtaaga aattttaaaa aaaggaaatt gctcattttt ttcaattttg
    27481 tttatatcag ctttaatatt aaaattataa gaataatctt ttagattttt tttaaataaa
    27541 tcataataaa atctataact cttaggatca tatcctgcta tataaaaaac atctctagtc
    27601 ataaaatatt tctttttgct tattataaca actttgcttt aaaagctctc ttaatcaaag
    27661 cttttcaatc ttatttgtct aaaaagaaat ttttgtaaaa attgccgttg aattgattag
    27721 tctgcaaaag atatttctta aaatgatata ctaaaacggg attaggttta taagcatgag
    27781 cttcacgcca aaaaaattga agtttttttg gataagataa gccttcaaaa tcataaaaag
    27841 cattaccaca aaccttagtt ggacagccct ctaaaatagc actaagccct acagtcgaat
    27901 ttatagtaat gcaacctaaa gcctttttta aaaggactgg taagtgagta tcgtgaacat
    27961 acaaaaccct tccttctaca tgatattttt gactcaactc atttataagt ttagaataat
    28021 ttctataacc cctatccatg ggatggtgtt taaaaactag ataagattta gccctagcat
    28081 gatttgcaaa agaaagtata gtctcttcta taaagtgctc tatacttttt ttataatggt
    28141 gcttaatttg tgtatcatta taaacttgca aaatcgctaa aaaatatttt ttttctaaat
    28201 tataaatttt ttcattcagt tttttctctg taatcttata aagatatttt ctatataaag
    28261 atctaaacca aaataaaaat tcaaaaggat ataaagtgcg atgatggagt ttgttgttaa
    28321 aaaatggagc caaaataaaa gcaaaaaacc aatacaaaaa agcatcaaaa gccataaatt
    28381 taaagccacc tggaatttct tttatgcttt ccttggtaaa aatattttga gaaagataaa
    28441 aatttttatc acgcggtaaa gaagaatttg cattcacccc atctttttct aaagtaatgc
    28501 aataaggcct taaatatcct tcttcaaaaa tccatatttc aattcctaat tctttagcta
    28561 ttttaatagc ctttacatga atagtgcgac aatcattata cattacaata gcatcgattt
    28621 ttttactttg aaaaaaacct gaatagaaat tttcaagatc tttttcatca catttacacc
    28681 ttgttccatt tggatagaaa aaaaaatctc caccattaaa attgaattta aaaactttag
    28741 tttgattttt tttcattttt gccgcaagat aatgaaagaa atttcccaca ggtccttgca
    28801 agagtaaaac atttttgccg ctaaattctt ttttaatttt actactaaat ctcatttctt
    28861 tgctaaaaat tcataaaatc ttcttatttt tctaagcata aacgttttaa aatctatcat
    28921 taattttata tgtttttttg aaaaataatc tttttgtaaa tttagcatta tatctaaaca
    28981 aacttcaatt tcacataaag tttttgtttt aggatttata tatcttggat atgtgatcaa
    29041 agcacctgct acaagctctt ctaggcttag ttttcttgtt cttctttcac atttatgttt
    29101 atcctttgtt aaaccccaac ctgcataaaa aggcatacca taggtaaaaa cttttttagc
    29161 tcttaaaaga gcatcaaagc cacttgtgga agtaatagta tgaatttcat cggcaatttt
    29221 tatggcacta tcaatactgc aatcttttac aatttcatca caaaattcca aaatgagttt
    29281 ttcatccttt aagcctacac ggttgccact tagcacatca ggatggggtt taaagatgat
    29341 ataagcgtct tgatttttag tccttacctc cttaagcaaa tcaagagtag acaaaccaaa
    29401 accccctaaa atcatcgaag catcatcttc aacttgagca gggattagaa tgattttttg
    29461 tcctttttta gcattaattt ttaaatcctc gtgctttaaa ccattgtatt ttgaaaacct
    29521 gttttcaagt aaaattttta tgatattttt tgccctattt agcatatttt catcaaaaat
    29581 ttcattttgc aaaagctctt ctaatttact tgctttattt ggatctatat aaagcccttg
    29641 atcatcaacg attaaagaaa agggacgcgt aagatcagag cctaaagaga tcgaacgaat
    29701 aaaaccatct tctactaaag aaattttagg agtaaaattg attaaattct catcttgtgc
    29761 tttttttaca agagtagttt taagagtttt ataatctatc cttttacccc aaatgaaaaa
    29821 tttatcactt tctttaagct tatatctatc taaagacttt agcgaattta aaaaaataat
    29881 ttcactgttt ttagctttaa aaaaaggttt aataaaatgc cttttccata aggtaaagcc
    29941 tagcataaaa aatcgttctt tttgcaaaaa aatccttatt aaacattctt gaaaatttaa
    30001 tattgtaatc tacaaaataa attataatct tcagctgtac cgatatctac aaaataatta
    30061 tcaaaaattt cagctctagc ctttaatttt tcataatttt cttgtaaaaa ttcttcaaaa
    30121 gaaaattttt cttgcaaagt aaaatcatta aaaatatctt tacttagaag ataaattcca
    30181 ccatttatta atccttgctt tttaaattct ttttctttaa aaaacttaat ataattttta
    30241 ttatcaagct ctactgtgcc gtatctatca aaatcattca tttgctttaa agcaagacaa
    30301 attttactat catttaaagt aagttttttt aaatcaatat caaaaatcgt atcaccattt
    30361 aaaacataag cttcattttt tataaatctc aaagcttctt ttatagctcc acccgttcct
    30421 aaaggctctt tttctatgct gtattttatt tttataccca aaaactcatc tttaaaatat
    30481 tcctttatca cttcatactt atatgaaact gctaaaataa cttcttttat gccttgcttt
    30541 ttaagatact caaaaataaa ttctaaaaaa ggcttatcat ttatcagagc cataggtttt
    30601 ggaagatctt gcactacact tcttaatctt gtgccaagac ctcctgctaa aactatagct
    30661 tgcaatcaaa cccctcgcca aaaagttctt cttcgacaat agcacagatg atatgcccta
    30721 ttaaaatatg tacttcttga attcttggcg tgcaagttga aggcactttt atacaataat
    30781 cacaaagctc gttcattact ccaccactag ctcctgttaa acctatgctt atgatttctt
    30841 tttctttaca aagctctaaa gcttttaaaa tatttttact atttccactt gttgaaatcc
    30901 ctataaaaac atcgccttta acgccttgag cttgcacttg tctagcaaat aaattttcat
    30961 atccataatc atttccaata gccgttagca cactagtatc tgttgtaagt gcgatactcg
    31021 caatacctag cctatcaaaa taaaatctac ttacaaactc ccctgcaata tgttgtgcat
    31081 ccgctgcact accaccattt cctgctaata aagttttatt accattttta taagctttta
    31141 taacttccaa tgaaacattt ttaatgagag ttattaaatt cttatctttt aaaatttgct
    31201 ctttcacaga aatggaatct gtaaagtgtt cttttatata ggaatttaaa ttctccatga
    31261 tttaactccc tcttttgtaa acgaaaaatc ttgcacgtag ccttgctctt tacttaaagc
    31321 cttaattaaa ttgtattttt tcgtaggatc tataaagaaa aacataaatc cacccgcacc
    31381 agctccactt gtcttaccgc tataagctcc attatctata gcaagtttat aaattctttc
    31441 aagctcatca ttgctaacaa tttcagaaat aatttttttt gattgccaag acttacctaa
    31501 aatttgtgcc aaggtatcaa aatctgcctt aaataaagct tctttcatct ttatagcgtc
    31561 ttgttttatt gcatgcattg cttcaagaga cttttcatct cctaattttc cttgtttatg
    31621 ctcttctata tcttttgctt ctcttgtgat atttgtaaaa taaagcacag ttctagcttc
    31681 aagctcactt gcaatccaat ttttaatacg caaaggatta actataactc ttttattatc
    31741 ataaaattcc atgaaattaa acccaccaaa agttgcggcg tattgatctt gccccccccc
    31801 tacaatacct aaatcttccc tttctatctc ataagcaagt ttagcaattt catattctcc
    31861 caaagaaaga ttaagccatt ctgcaaaggc ttttataaca cctacaacca aagttgagct
    31921 tccacctaat ccgctaccac ttggcgcatt agaataagta tgcaaagaaa agcttaaagg
    31981 tctttttgca aaatctttta caatgcgatt ataaatgctt ttaaaaatat ctagttttcc
    32041 atcattttct aaaaattctt tactttcata ctcagaataa gaattcgtat caggagaatc
    32101 aaagatgatt ttttcatctt ctctttcaat caaagtacaa tgtatatata aagatatagt
    32161 cgcatttaaa acatagcctg tgtatttatc acaatataaa tttatatcag ttccaccgcc
    32221 tgctagaccg aggcgaagtg gagtttgcgt gcgtatggtt gtcataaatc tcccaatatt
    32281 tatttatcat atccaatcaa gcaaaatatt ttgaatatta tacttatcaa tcaattgcct
    32341 caactttcct atctttttct ctgaatcatc aaacatatat tcatgtgttt cacaagcaat
    32401 atagtcaatt ctttcatata tttttctatc aataattttt ttcattatct caaattcggc
    32461 tccttcaata tcaagtttta gaaaataaat tcttttatgc tgtgttaaaa tttcattttc
    32521 tataaactca cacaaatcaa ttacttgaac tttatatgtt ttttctgtct gatcgtcttg
    32581 tgcactttca actatacgat taccttgaga tagtatccta tttccaaaca taataaaatc
    32641 tgtttcataa cttctatccg atactgcttt ttgaaaaagt tttacattta tattattttc
    32701 atattttttc tttaaaaaat aattcaaata aatatttggc tcaaagatat aactttgtcc
    32761 accacaatgt aaaataatat cagtaattaa gcctgcatgt ccaccgcaat caatacatat
    32821 tggacgatac ccccccccct ccattaatat aaagcatatt gtaaaaaata tcataatatt
    32881 gtttaggaat tctagcatta tctaataata aatttaatct accaagtcct tgtggatcag
    32941 ctatagctcc ctcaatcaaa tgcaacgtat tataaacatt ttcttgctta ttccaatagc
    33001 ttaaagcttg caactctgaa attattcttt ctacatcagc tatcggcttt ctagcctgct
    33061 gatgattgtc aatttgataa accaagctat ttagagcctc tttcaatgat tccaattgtt
    33121 cttttttcat tatttaatat cccctttaac tttaattaaa atttgcaaag cgattaactt
    33181 tcatcatttt aaatgctctt aaaagctctt caataccatc ttctaaagta ttatctggtt
    33241 tccaacctgt agcttctaat ttagcatttg aaaccaaata atctctttta tctggatctt
    33301 ctcctatact tgctgaatgg atataaaaat caggaacata ttttttaatc gtttcagcaa
    33361 gctgtctttt ggtcaaattt gcagagctta atcccatatt ataagcttga cctttcatct
    33421 tatcgtaatt ttcaatccca tgaataaatc ctttaaccac atcgcgaaca tgaatataat
    33481 tgcgtctaaa atgctcttca aaaagcacta taaatttatc tttatacgca cgataagtaa
    33541 aatcattaac aagtaaatca agtctcattc taggtgaaat tccaaaaacg gtagccaaac
    33601 gaaaagttac acaatttcct ttatcaagta agtattgctc cgcatgcact ttatcgatcc
    33661 catattctga gataggacgc aagggagatt cttcagtaca catcgcatct ttttctccta
    33721 tgccataacc actgtttgta tttggataaa taaacatttg agaaggactt gcaaaatcac
    33781 ttatcatttt tacagcttca taattaatca ttttagctaa ttttggattt cttttacaaa
    33841 gtggagctcc aactaaagcg gctaaaggga tgataatgtc agattttgca acctcttgct
    33901 taatgagatt ttcatccata gcatcgccat ttataaaagt aaatttttta ttatgagaac
    33961 aagctaaaag agaaatttga tcaaacatca aattatcaat tacacaaact tcataacctt
    34021 tttcaagtaa aatcggtgtt aaaaccgaac ctatataacc tgcaccacct gtaattaaaa
    34081 ctttttttga catatttttc ctttcgtttt ttaaaatcaa ttttgtgttt tataccactc
    34141 atacatcatt ttgataccat cttcaagttc aattttatgt ttccaaccta gagaatgaat
    34201 ttttgaacaa tccataagtc tatccattgt gctatctggc ctagaagcat taaaaactaa
    34261 atctccacta aatccaacta tattttttac catcaaggca acttctttga ttgaatagtc
    34321 aatgcctgtc cctatattaa tatgagtatt tttactttca tctttaataa gatctttaaa
    34381 atcaatattt tgcattgtat agatagctgc atcagctaga tcatcactat gaataaattc
    34441 tctcctaact ttgccaattc cccaaatttc tacactcttt tcgctaatcc caaaattata
    34501 taaatattct tttgcttctt caaaattatt cattttcaaa tcttgaagga tttgagttat
    34561 attaccctcg cttaacaatt ttgctaaatg aaattttcta agcaatgcgg gtaagactct
    34621 tgattttcca aaatcaaaat ttgctttagt tccgtaaaga ttatttaaaa caagagtaat
    34681 aaaattagta ccatattgaa tattataact ttcacacatt atagctccag ctattttggc
    34741 tgcaccaaaa gaataagcgc catattctaa atcaccttga aataaatatt cctctttcaa
    34801 tgggttttta gcattctcag gatacatata cccagaacca aaaaatacca attttttaac
    34861 attattaaga aatgaattgt gaataacatt gttttgaatc atcaaatttt cataaataaa
    34921 atcagccctt tgagcgacat ttgcagcacc acaaggtaag actgcagtca aaaaaacata
    34981 ttctggcttt tcttctttaa aaaatttagc aaccgcttgc tgattaacca aatcaagctc
    35041 ttgtcttgtt tttaaaacaa gattattaaa ccctcttttt tgtaagtttt ctactaatgc
    35101 tgtgcctgcg gttcctttgt gccctgctat atatattttt gaatttgttt gcatcaataa
    35161 cctctaaatc gtattggaat ttctggattt gaaatccaag gaaaatctaa atttttaaat
    35221 ccccctgcaa catctctata tttcacaata tcaagattaa tcaaattttt tcttaaataa
    35281 ctaacctcca aagtggtact aaaaaataat ccttgagaat aaaaaatttt cccatggtta
    35341 tgaaaatgtg tatgtattgg aacaaaatat tcattaagtt tttttagcaa acttattctt
    35401 ttttccaccc catcttgctc ctcaggattg cacccatgaa attcaaatat aacttgtgaa
    35461 aaatatttat ttaaaatact tatatcaata ttttcaagca tatcccattc gcaattttca
    35521 atatcacatt gcaaaatatt tggcttgctc tcatctaaat tattatcttt taaagcttgt
    35581 accaaagtaa ttgtattctc attatttaca ttacctataa attttttatg aaaaataata
    35641 ttttcatggt cataaggaca tttttctata ctagcatcat attctatcac cttaaatccc
    35701 ctctgagcca tttctaaatc ccaaggagaa ctatccgaaa cacccaaaga aagagctttt
    35761 gcattaatat cactcatatc cccccccccc attatacatc acataaccac catctccatt
    35821 accacctatt cttaacaaat cacacaaagg caattccaaa ggtcgaataa gatttaaata
    35881 atttacaata ttcctataac actgttcatt attatttata cgaatataat ttctatctct
    35941 tgcttgtaat aataaaagta aaatttcttt atctttttta tcaatatcta aattcgaaat
    36001 aatatttgac attaagattt gataggacaa ttgattgcta agtttaatat tattatttaa
    36061 ttcttttaat aatttttcca taatttatcc tttattttta gttgcaagaa tatcgcgctc
    36121 ggaaagaata ggcgtatttg ttggccaatc tataccaatt ctttcatcat tccatgcata
    36181 agtaaattga tcaggtgcgt ccatatattc tccctcataa gcaagtttgt aataatacac
    36241 tgcttccttt gaactcacat aatgagaatt ccccatattt ggcggtaata aaataagttg
    36301 ctgattttta tgacttataa taaatttctc ccattttaaa taagttgaag aatcttttct
    36361 gcaatcaacc acaacttgat gcacttctcc atagacacaa gttacaagtt tgtaagtttt
    36421 cacatctccg tgtattccac gtaaaacatt gaaatgggaa tttataaatt tgtcatgctt
    36481 aaatttaatt ccatctggaa ccaacttgct taaatgttca tctgtaaaag ctgtccaaat
    36541 ttcacctctt aaatctctaa atttattagg agttatgata tacactcctt ttaaaatttt
    36601 tgactcttct atattaaaat ccattgtcat gactagttct ccttctcaaa ctc
//
LOCUS       DAPWAA010000006        35838 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.006, whole genome shotgun sequence.
ACCESSION   DAPWAA010000006 DAPWAA010000000
VERSION     DAPWAA010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 35838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35838
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.006"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            124..336
                     /locus_tag="RTF91_000287"
     CDS             124..336
                     /locus_tag="RTF91_000287"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943217.1"
                     /translation="MKNIILGLAVIVSLSSIALASNHSYHSKKNLSNLQQDGILTCEN
                     FHNCQTTNQPIYQHQACAKLGICINH"
     gene            346..570
                     /locus_tag="RTF91_000288"
     CDS             346..570
                     /locus_tag="RTF91_000288"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943218.1"
                     /translation="MGLVYSQCCNQVIDTSLYYTAKPLLKLEQARLEQEKKTENDNVK
                     KVETQAKKVEEQSDSTNIDNQADKLLDISA"
     gene            884..1950
                     /locus_tag="RTF91_000289"
                     /pseudo
     CDS             884..1950
                     /locus_tag="RTF91_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836555.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
     gene            complement(2304..3494)
                     /locus_tag="RTF91_000290"
     CDS             complement(2304..3494)
                     /locus_tag="RTF91_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDZ4943219.1"
                     /translation="MLMSYEESLKILHSHIKAYEKIEKIAITECLGRILAQDIKASKN
                     QPEFPISAMDGYAIKFEDQDKALKILGITPAGTMPQFIVQNGTCVKTFTGSLMSEGSD
                     TLVPVENVRVENDTLFIEKKVSQAFAVRAIGENYKKDEILLKKGTKLNYSEIALLTEL
                     GFFHISVFIKPVIGVLSSGNEIKDLGEVLENPAQIRSSNHIAIANLAKNLGCETRVFP
                     LLKDDEKATFSTLESALQSCNILVTTGGVSMGDFDFLKKAVKEYEIIIDKADIKPGRH
                     IKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTP
                     YLEFVACNIEFKNGRILANLEGKKEGSSAIINNLNNKAALMIVSKKCEILENESLVDI
                     IFMP"
     gene            complement(3498..3944)
                     /locus_tag="RTF91_000291"
     CDS             complement(3498..3944)
                     /locus_tag="RTF91_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HDZ4943220.1"
                     /translation="MDHFTLYQGSLEIPKIYSLWYEFAKDKNCGTLLTFCGIVREEGG
                     IKALSFDIYEPLLKKWFDEWQKRVEFDGITLLFAHSIGDVAIHESSYFAGILSKQRKL
                     GLKLLNEFVEDFKASAPIWKYDIINKERIYAKERSTKLCGAGLLKG"
     gene            complement(3945..4166)
                     /locus_tag="RTF91_000292"
     CDS             complement(3945..4166)
                     /locus_tag="RTF91_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HDZ4943221.1"
                     /translation="MVKVEFLGPINKENLELKVKNLKELKEFLQKDENLKEWLELCAV
                     SLNDEIIFDENTNLKDGDKIALLPPVCGG"
     gene            complement(4168..5709)
                     /gene="cueO"
                     /locus_tag="RTF91_000293"
     CDS             complement(4168..5709)
                     /gene="cueO"
                     /locus_tag="RTF91_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HDZ4943222.1"
                     /translation="MNRRNFLKFNTLTLASMGIAYANPMHDMHSMHKNNNTNHHLDTS
                     FIDFAPKNLKLLDPKQFPKGQILKALPLLKNESKEKNIFRATIEIKENHIELIKGKKT
                     LFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVAVPPDQDGSPHDPILAG
                     GEKTYRFEIPQDSAGTYWYHPHPHFTTSKQVFMGLAGAFVIKAKKDALSHLKEKDLMI
                     SDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLN
                     LRIQGVKFILVGTDGGLIEKPIFKDELFLSPASRVEVLIDALKDGEFTLESTYYDRDK
                     MMVKEEPNTLFLADISLKKENLEFPKNLKIFKPSEEPKEFKEIIMSEDHMKMHDMMSK
                     SESELKTALASMFLMNGKTYDLKRIDLSSKVGVVEDWIVINKSHMDHPFHIHGTQFEL
                     ISSKLNGKVQKAEFRALRDTINVLPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGN
                     LEVKE"
     gene            5831..6979
                     /gene="nspC"
                     /locus_tag="RTF91_000294"
     CDS             5831..6979
                     /gene="nspC"
                     /locus_tag="RTF91_000294"
                     /EC_number="4.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxynorspermidine decarboxylase"
                     /protein_id="HDZ4943223.1"
                     /translation="MFYEKIQTPAYILEEDKLRKNCELLAMVGQKSGAKVLLALKGFA
                     FSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIDEIASLSHHIVF
                     NSLAQFHKFQAKTQKNSIGLRCNIEFSIAPKELYNPCGRYSRLGIRAKDLENLDLSGI
                     EGLHFHALCEESADALEAVLKAFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLITL
                     CKNFSDKYGVQVYLEPGEAVGWQTGNLVASVIDIIENEKQIAILDTSSEAHMPDTIIM
                     PYTSEVLNARILATRENEKKSELRENEFAYLLTGNTCLAGDIMGEYAFDKKLQIGDKI
                     VFLDQIHYTIVKNTTFNGIRLPNLMLLDHKNELQMIREFSYKDYSLRN"
     gene            7285..7998
                     /locus_tag="RTF91_000295"
     CDS             7285..7998
                     /locus_tag="RTF91_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HDZ4943224.1"
                     /translation="MGALMDLEKLRLARSLYYQCLGELFVFSFSKERLSKLQEYLKTM
                     QECLFDENLKSSFDILLKHLEDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENS
                     NPLLCVRQILVKSKIRRNEKIFKESEDNVGFCLLLMSEFLRQNEDDLAKELFEKVINK
                     SVDEFLSDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKMNSKKVQNDLSRSEF
                     LRREANKQRRTREKSQRIS"
     gene            7973..8164
                     /locus_tag="RTF91_000296"
     CDS             7973..8164
                     /locus_tag="RTF91_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tat pathway signal protein"
                     /protein_id="HDZ4943225.1"
                     /translation="MKNRREFLKKSAFALGAAGMLGSTTLALAKDEERKDLVKGKSKK
                     KEVLFQRSANWENYYIKAE"
     gene            8164..8706
                     /locus_tag="RTF91_000297"
     CDS             8164..8706
                     /locus_tag="RTF91_000297"
                     /inference="COORDINATES: protein motif:HMM:NF016750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HDZ4943226.1"
                     /translation="MSSVGENIKLTRRSFLKMAALSSLATPLLARNETLREASVDELK
                     EAYEDSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMV
                     RSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAY
                     YIRKFAAFFGTNNVDHQARI"
     gene            8755..10968
                     /locus_tag="RTF91_000298"
     CDS             8755..10968
                     /locus_tag="RTF91_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HDZ4943227.1"
                     /translation="MTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIV
                     VDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIRQE
                     AAKWTAEEVENVTGISKEVLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQ
                     MVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEVTWRYYAKIWGVDYE
                     WLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQ
                     QVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQW
                     RFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGKIVWPENATREIAKAVRS
                     IGLNGWSPERLKKHTLYWDKFDEITLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTD
                     IEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPINTGYPQITKDNIEKVLGITLSAEE
                     KDKIGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDL
                     VQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYL
                     TRLTPEMFCEINPELAKEQDIKAGDMIWIHSPEGTKIYVRVKVNPGVAKDMIFLPFHF
                     TGIMQGVDLTHNFPKGTKPYASGESANTVTNYGYDIMCQIPETKGGLCKISKDGK"
     gene            10965..11606
                     /locus_tag="RTF91_000299"
     CDS             10965..11606
                     /locus_tag="RTF91_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDZ4943228.1"
                     /translation="MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIR
                     RRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCG
                     YCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVP
                     VCAAMCSTKALLVGESSKIEQIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL"
     gene            11603..12535
                     /locus_tag="RTF91_000300"
     CDS             11603..12535
                     /locus_tag="RTF91_000300"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HDZ4943229.1"
                     /translation="MRKVFVTLLLSVVSLFAYGNERMGQDTQIWDFHRITNIPNYDTF
                     GKLWTTLQGEYIATIALIAVIAVLAAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHF
                     IAAISWVILVPTGFVMMFGATFGGGVFVRVCKNLHAFATVLFIISIIPMFLWWIKRML
                     PASYDIRWMMIVGGYLSKIKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDF
                     NSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYK
                     EEEEIYILHSYWYKELSNKKQIEPSFFYDPNIKI"
     gene            12704..13486
                     /gene="fdhD"
                     /locus_tag="RTF91_000301"
     CDS             12704..13486
                     /gene="fdhD"
                     /locus_tag="RTF91_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDZ4943230.1"
                     /translation="MDPLFTTQILKYKGDESFTCNDTLVREIKLEIFINDEKVGALMA
                     TPVDEQALAIGYLMSENIIAKVSDIESIKTKDDGMSVFIKAKIDKENLAKLNAEGVVI
                     SGCGRAHTANIDLEAIEASKISSNVKFSKDEILKQMSTFYTQCELYEKTGCVHTAKLF
                     VDDKTFFIGEDIAQHNTIDKALGKACLAGVDLSQCFLMVSGRLSSEMVAKAVMHKIPV
                     LVSRTAPTCLGVMIARKFNLTLCGFARENKINIYSGEFRIHG"
     gene            13479..14216
                     /locus_tag="RTF91_000302"
     CDS             13479..14216
                     /locus_tag="RTF91_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HDZ4943231.1"
                     /translation="MDKNQEKEIISYMKELLNSNEKLDCGTAFKIAKKFSVNIEKIGK
                     LANENHMRIDNCELGQFGHLDFEKAKIEVLKKIEPSLDEKRRIFCKDARDIAKEDCGL
                     KSMRSALKAYKVDVKYCQLGCFKEKKGKQFIVRTKTWIENADGDLLFGKGKTELLELI
                     GQTGSLLHASKLMGINYKKAWMHLQTLQKNSQEILVSTRQGRSKESGTKLTPRAMELM
                     ENYSILQKDIEEYANKRFKELFLKGKK"
     gene            14326..16428
                     /gene="ccaA"
                     /locus_tag="RTF91_000303"
     CDS             14326..16428
                     /gene="ccaA"
                     /locus_tag="RTF91_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate chemotaxis receptor CcaA"
                     /protein_id="HDZ4943232.1"
                     /translation="MFKSLNIGLKLIFSVATVVVIGLVILISLITKQVSQNITKNTED
                     ILASITKEYATQTQGIFGEMIALNKSISGTLTEMFRSTSKENLDIDSITNIITNTFDN
                     SAYSNFTYLYLIDPPEYFKEESKFFNTQSGKFVMLYADEEKDNKGGIKAIQASDEIAN
                     LQVVQDILKKAKYGENKVYIGRPIRMNLEGQNFNAVNVAMPIFDQKNQVVGVAGMTLD
                     FSAIASYLLDPKGQKYNGELRALLNSDGFVAIHPDKNLVLKNLKDVNPNKGAQETYKA
                     MGEGKNGVFNYIASDGDDSYAAVNSFKVQDSSWTVLVTAPKYSVFEPLKKLQLIIIGA
                     SFIFIFIVLGVVYYCVRKIVASRLPVILSSLESFFRFLNHEKIEPKTIKIRANDELGA
                     MGRIINENIEKIQMSLKQDQNAVDESVQTAREIEKGNLTARITKNPINPQLVELKNVL
                     NRMLDALQNKIGSNMNEINRVFDSYKALDFSTEVFDAKGEVEITTNILGKEIKKMLVA
                     SSNFAKDLANQSEELKNSMQKLADGSNAQASSLEQSATAVEEINSSMQNVSGKTVEVA
                     SQADDIKNIVNVIKDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRQLAERTGKS
                     LSEIEANINILVQSVNEVAESVREQTAGITQINDAIAQLESVTKENVEVANVTNNITN
                     EVNQIAAAILEDVNKKRF"
     gene            16541..17113
                     /gene="yedF"
                     /locus_tag="RTF91_000304"
     CDS             16541..17113
                     /gene="yedF"
                     /locus_tag="RTF91_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDZ4943233.1"
                     /translation="MKIDCRNLSCPQPIVETKNALEKLQEGETLEIILNSFISKNNVV
                     KFLNSLKLNPIVDENAQEFYIKVQKKNFNSSEVNVHDYSVLFLKTDKVGKGELGQNLL
                     VGFLNTLKNLDHAPSKILCVNESVLINVDENHKAHLVMKELENLGIEIISCGACLEFF
                     NKSKELKIGSMGNAYEILNELFSKAKIITL"
     gene            17123..18145
                     /gene="selD"
                     /locus_tag="RTF91_000305"
     CDS             17123..18145
                     /gene="selD"
                     /locus_tag="RTF91_000305"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:17171..17173,aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDZ4943234.1"
                     /translation="MKYKNQNLTHFVKAAGUAAKLSPGGLKTILNFMQKSPALLSDIG
                     NNEDASVYQISSDLALVQTLDFITPVVNSAYHFGAIAAANALSDVFAMGAEVINALNI
                     VGFDACNHDLSLLKELLEGANDKVQECNALIVGGHTIESSELFFGLSVTGKVHPSKFI
                     ANNTAKIGDCVILTKPLGTGVLSTALKAQMLKQKHLDTMLESMMELNYKASQIALKFH
                     PNAMSDVTGFGLLGHLKEMLNENISFEIFESELPFLDGAKEYFNMGLIPAGAYKNLEF
                     MKEINPNLNEEKLLLCDPQTSGGLLISISEKQALECLKKLEDENIQAKIIAKVINKQE
                     NDIIIS"
     gene            18274..21762
                     /locus_tag="RTF91_000306"
     CDS             18274..21762
                     /locus_tag="RTF91_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HDZ4943235.1"
                     /translation="MIQKALVLAEELQKKIELNISNAEKEFHSKMQKLLNNPKNKVML
                     IELLDRSFRCKNKNASFELIEYTLNKYGIADFFSAFEKFLLFSFLNFGKFAPSLSVPF
                     FIKHLREDTKAMVLDANPNVLEPHIRKRKEQDKITLNVNLIGEEVLGEAESKYRMQKY
                     EEALKSSYITYISIKITTIFSQINIIDFDYSKEEVVKRLDYLYALALEEEKKQGLSKF
                     INLDMEEFRDLELTVVAFMESVAKFDIKAGIVLQAYIPDSYEYLKKLFAFSKERVLKG
                     MQPIKIRFVKGANMESEETIASQRGWELPTFYKKIDTDSNYNKMLDFILEGDNYKYIN
                     IGIASHNIFEIAYVYTRISEAGALKSFTFEMLEGMSLQCSYELSKMHDLILYAPVCDE
                     EHFNNAIAYLVRRLDENTSEDNFMRYFFNLKVGDKNWNIQKELFLKSLEGIKNLDNTT
                     HRKQDRNKESNIVSSYESKKFNNESDTDFVLMQNRAWAKDIKVKYENLKDYDVYPVIG
                     DLDFKAANLNALEVKDKIKNNLIGKAYLAGEKEIKQALEIAKNSKFTQKSHDEIYQIL
                     AKSAKLMRERRGDLIGLAALEVGKTFLEIDPEVSEAIDFTEFYPHSLEELKKQNPKVQ
                     FSPKGIGVTIAPWNFPIGISVGTIAAPLAAGNVVIYKPSSLSILTGYMLCKCFWDAGI
                     PKDALIFLPSKGSDVSKYLLVDEAIKFSILTGGEDTAYAMLKANPTLLLSAETGGKNA
                     TIVSKFADRDSAIKNIIHSAFSNSGQKCSATSLLILEEEVYDDEEFKKTLVDAASSMA
                     VGSPFEFKNKLGALADKPSQKVQKALNELQTYEEWALKPKFLDDNPYLMTPGIKYGTK
                     KGDFTHMNELFVPILSVMKAKNLKEAIDIVNSTGYGLTAGFESLDEREWEYFHTHIEA
                     GNIYINKPTTGAIVLRQPFGGIKKSAIGLGRKVGIYNYITQFLEIKQEGFDDHLIEEK
                     FSKKLVQINLKEIKDIVNDLIKMSQSYAYHYKNEFSISKDYVNIRGEDNLFSYTKIKN
                     MVLRLCGNESLRDVLGVVLGTNIANIDLSISYDEQDISMIEEIVQNIGAKVLFLKENR
                     ENFIKSIEEYERVRYLAKPNVNDEIYKEAAKLAKIIIREKPLLNGRFELLNYFNEKAL
                     SISFHRYGNLGIRAIS"
     gene            21780..23246
                     /gene="putP"
                     /locus_tag="RTF91_000307"
     CDS             21780..23246
                     /gene="putP"
                     /locus_tag="RTF91_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDZ4943236.1"
                     /translation="MEVVQINTPIAVTFVAYALLMLYIGFYFYKQNKNTEDYFLGGRT
                     MGPVISALSAGASDMSGWLLMGLPGALYVSGFVDSYIAIGLTIGASLNWIFVAKRLRI
                     YTSVIANSLTIPDYFETRFDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFG
                     IRYDYALTTGTIIIVAYTFLGGYKAVCWTDMIQGLLMMTALIIVPSVMLYHLGGFSEA
                     MNIVEEIKPQALSMDGVGAISIISALAWGLGYFGQPHILVRFMSIRSTKDISVATFIG
                     IAWMMICLLSACIIGVLGIAYVYKFELSLQDPEKIFIVMSQLLFNPWIAGILLSAILA
                     AIMSTASSQLLVSSSTIAEDFYKKIFREDAPSHVVLNLGKLGVLLVAVIAFLISTDKN
                     SSVLSIVSYAWAGFGASFGSVMLFSLFWSRMTRVGAILGMITGAATVVLWKNFANSDL
                     YEIVPGFLAASVVIIIASLLTNVRSGTKAAYEKMLKEL"
     gene            complement(23262..23489)
                     /gene="yedF"
                     /locus_tag="RTF91_000308"
     CDS             complement(23262..23489)
                     /gene="yedF"
                     /locus_tag="RTF91_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDZ4943237.1"
                     /translation="MKITYSLNLQGEACPYPAIATLDVLPQLKSGEILEVLCDCPQSI
                     NSIPQDAKNRGFKVLEIDQSGPTLRFLIQKP"
     gene            complement(23486..24703)
                     /gene="yedE"
                     /locus_tag="RTF91_000309"
     CDS             complement(23486..24703)
                     /gene="yedE"
                     /locus_tag="RTF91_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HDZ4943238.1"
                     /translation="MNSFKQKYFINFWDNSRSMIALGILSAVYFGIFGNVWAVTGEMT
                     RWGGEFLELLGINLDGYSYYQKQNLDGTPLTRTDGIMLIGMFIGCLVAALLANKVKFR
                     LPASNIRIFQAIIGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLG
                     VKICNTSFFKPKAKLERVNKENLPLNKQNLSAKLYFNLGIVLFIAFLVWVLYLVFVNG
                     NISAQNKQSLLALALIFGFIFGFIISRGQICFTSCFRDLFLFGRDNAIKGALIGMIIA
                     SLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVFAGGCECGWAYRAFEGQSHFMIV
                     GIANIVGTMILALSYDFLPKAFKEGVKINLLAEFGNLNGFFINLVLFILMFAFVVFYK
                     KHFFEKFSLKDKQ"
     gene            24843..24940
                     /locus_tag="RTF91_000310"
     tRNA            24843..24940
                     /locus_tag="RTF91_000310"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:24877..24879,aa:Sec,seq:tca)
     gene            24968..26218
                     /locus_tag="RTF91_000311"
     CDS             24968..26218
                     /locus_tag="RTF91_000311"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDZ4943239.1"
                     /translation="MSKADIIVGIQWGDEGKGKVVDKLCENYDFVCRSAGGHNAGHTI
                     WVNGVRYALHLMPSGVLHPRCINIIGNGVVVSPEVLIAEMAQFENLKGRLYISDRAHL
                     NLKHHSLIDIAKEKLKGKNAIGTTGKGIGPSYADKINRTGHRVGELLEPGRLCEVLMK
                     DFEANKTFFEMLEVEIPSAEELLADLKRFNGILAPYITDTTRMLWKALDEDKRVLLEG
                     AQGSMLDIDHGTYPYVTSSSTISAGALTGLGLNPKEVGNIIGIVKAYTTRVGNGAFPT
                     EDKGEEGKKIAQIGKEMGVSTGRKRRCGWFDAIAVRYTARLNGLDVLSLMKLDVLDGF
                     EKIKICRAYEYKGMEIDYMPSDLENVRPIYEEMDGWDKVFGIKDYDLLPENAKKYIAR
                     IEELVGVKVKYISTSPERDDTIIL"
     gene            26215..26643
                     /locus_tag="RTF91_000312"
     CDS             26215..26643
                     /locus_tag="RTF91_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar FliJ family protein"
                     /protein_id="HDZ4943240.1"
                     /translation="MKSKYNSVIKVRKQQLDKAESNLNQAKQRQIENEKAYELSRQEY
                     ENLGVLPRSGSIAELRSNLSMAQVGREALARVKEKVELSKKEINHYQFLYQKAHLDYE
                     KIKVLEAEEIKQKQKELAKAEEKFLDEIAISRFFKGEKDD"
     gene            26636..27154
                     /locus_tag="RTF91_000313"
     CDS             26636..27154
                     /locus_tag="RTF91_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotE family protein"
                     /protein_id="HDZ4943241.1"
                     /translation="MIKKFIFLVFISSTVFGAEQDCEQYFEARKAQIELQTREFDEAR
                     QSLEAYKASFEALQKERLENLEKKEAEVNATLAKIEELKLENARLVEEQQKILNSIND
                     KTQGRVKEIYSQMKDTAIADVLSQMDAEDASKIMLSLESRKISGVLSKMDPKKASELT
                     LLLKNLDNNASN"
     gene            27245..27796
                     /locus_tag="RTF91_000314"
     CDS             27245..27796
                     /locus_tag="RTF91_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF507 family protein"
                     /protein_id="HDZ4943242.1"
                     /translation="MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEK
                     DILNERKLDEKVKELLEQQEDEMELMQVDRKNMFWLVKKKLAPQFSVILDSEDRHNHL
                     AHRILEELVENDYINFIVSENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIP
                     GSEEYELIFEKLYQEELRKKGMF"
     gene            27796..28914
                     /gene="carA"
                     /locus_tag="RTF91_000315"
     CDS             27796..28914
                     /gene="carA"
                     /locus_tag="RTF91_000315"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDZ4943243.1"
                     /translation="MKAYIYLENDIFLIAKAFGKGGTFFGELVFNTSLTGYQEIISDP
                     SYAGQFIVFSMPEIGVVGTNENDNESKEIFASGVLMRELSPSFSNFRAKESLQDYLER
                     HGKIGIYELDTRYLVKMIRNNGNLRAVISTEISNKEDLKIALEKSAKIDEINFVKEVS
                     TKKNYSHKQGVWNSNLQKFNDAKRSEKKVAVIDYGVKTNILNELVEVGFEVEVYPYNV
                     KADELITLYKKGEIQGVFLSNGPGEPRILKQEIVEIKKLIEAKIPMLGICLGHQLLSN
                     AFGYETYKMKFGQHGANHPVINLDTKTVEITAQNHNYNVPEELAQVAIITHRNLFGDN
                     VEGVRYKNYPIISVQHHPESSSGPHESKYIFKEFMNLM"
     gene            28911..29570
                     /locus_tag="RTF91_000316"
     CDS             28911..29570
                     /locus_tag="RTF91_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDZ4943244.1"
                     /translation="MNIDFLAIIGVAFLSSFGHCYSMCGGFTLLFINLNSKSNNLFLL
                     TLIYHLFRIFAYIVLGIIFGTFGNILAINAKIQGLSFFVLGVFMMILGFALIFRGNML
                     SFIENNVFFDGFIKKIIKKSKNFKGLKSAIFLGFSNGFVPCGLVYFFIANAMSKQNVF
                     ESILVMMIFGVSTLPAMLFFSKISQFFSDFLRNLFNYLSYGIIICYGINLAYIGFKAF
                     Q"
     gene            30690..31370
                     /locus_tag="RTF91_000317"
     CDS             30690..31370
                     /locus_tag="RTF91_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDZ4943245.1"
                     /translation="MSQECKKLIILVVEDEIKTRESLIKVLSERFSKIIGARNGVEGL
                     KKFKKFKPDLVITDIAMPIMDGLDMAREIKEISDDVPIVVLSAYSEKERLLCSIDIGI
                     DKYLIKPIDIEELFKVLNCLVGEKIEANMLVKISEEYQFNKTKRTLIHNGKEVVLTKK
                     ELAFISLLLKQPGVLVLHEDIKKNVWIGEHVSDTAVRTFIKRVRDKVGEDFIKNVPSL
                     GYKININK"
     gene            31490..32956
                     /gene="ccoN"
                     /locus_tag="RTF91_000318"
     CDS             31490..32956
                     /gene="ccoN"
                     /locus_tag="RTF91_000318"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HDZ4943246.1"
                     /translation="MHPGNVLNYDYTVTRYFMFATILFGIVGMAIGTLIAFQMAYPNL
                     NYLAGEYATFSRLRPLHTSGVVFGFLISGIWATWYYIGQRVLKVSMAESRFLMTVGKL
                     HFWLYMFTMILAVISLFMGVTTSKEYAELEWPLDILIVLVWVLWGVSIFGLIGIRREK
                     TLYISLWYYIATFLGVAMLYLFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYG
                     HNAVAFIFTVGVIAQIYYFLPKESGQPIFSYKLSLFAFWGIMFVYLWAGGHHLIYSTV
                     PDWMQTMGSVFSVVLILPSWGSAINILLTMKGEWSQLRESPLIKFMILASTFYMFSTL
                     EGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRVFKRELYSKSLM
                     EAQFWIQTTGIVLYFSSMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIIPYYWIRAI
                     GGLLYLIGFFMFTYNIYKTIACGRVLDKEPKSASPMAA"
     gene            32969..33634
                     /gene="ccoO"
                     /locus_tag="RTF91_000319"
     CDS             32969..33634
                     /gene="ccoO"
                     /locus_tag="RTF91_000319"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HDZ4943247.1"
                     /translation="MFSWLEKNPFFFAVAVFVVIAYAGIVEILPNFAENARPIEGKKP
                     YTVLQLAGRAAYIKDSCNACHSQLIRPFKSETDRYGMYSISGEFAYDRPFLWGSKRTG
                     PDLARVGNYRTADWHENHMWDPISVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVF
                     NVPYDTENGTKLGSWEDAQAEVRAEAQAIVDQMKNQEVKDAFAKGEIKEIVALIAYLN
                     SLK"
     gene            33639..33902
                     /locus_tag="RTF91_000320"
     CDS             33639..33902
                     /locus_tag="RTF91_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase, cbb3-type, CcoQ subunit"
                     /protein_id="HDZ4943248.1"
                     /translation="MEHLSIVFNVIKNLITLDLAAVQRHEWEIFQGYGFFALVMFLSI
                     VLYTYWYHLYKTEKKGERNYENYANLALKDDIDDSVLESKRSA"
     gene            33902..34765
                     /locus_tag="RTF91_000321"
     CDS             33902..34765
                     /locus_tag="RTF91_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDZ4943249.1"
                     /translation="MQWLNLEDNVNLLSLIGAILIILITLVIVSRMFKQMKEKKGESE
                     LSEHSWDGIGEYKNAVPTGWAVVFFLTIVWAIWYFLWGYPLNSFSSIGQYNEEVTTHN
                     AKFEEKFKNLSPEDKIAMGQNIFLVQCSACHGITGDGINGKAQNLSIWGSEEGIIDAI
                     KHGSKGMNFPGGEMLGAADLGIAEEDIPAIAAYVAKDLSAIKKTANENLVAKGKEAYA
                     TCAACHGEDGKGQDGIFPDLTKYGSAAFVVDVLHSGKAGFIGIMPSFPALNDIQKEAV
                     GEYVISLSRGE"
     gene            34762..34983
                     /locus_tag="RTF91_000322"
     CDS             34762..34983
                     /locus_tag="RTF91_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4006 family protein"
                     /protein_id="HDZ4943250.1"
                     /translation="MMENNNRCIFSLSGVTGMLIATVLLLVILVILTIWGLKAQQEVM
                     QKPYNLKDIQSVKMFGSKEQDHRSIKEAQ"
     gene            34980..35081
                     /locus_tag="RTF91_000323"
     CDS             34980..35081
                     /locus_tag="RTF91_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943251.1"
                     /translation="MNKALEYLIVIGLVVAAVITAWSVLTVNHLHIG"
     gene            35078..35677
                     /locus_tag="RTF91_000324"
     CDS             35078..35677
                     /locus_tag="RTF91_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943252.1"
                     /translation="MKKILQDGFLAIFFFILLPSKIFALDAVLFNENILSQKVSNEIN
                     LIGKELYQKSNIFVGVMVGDKTEIETLLNMQKELPQSYILLLLSKNSHKVDIVGSKGA
                     LALIDKEAVLSPYSGTGSILPILATSKGDIYNAAILNGYADIVDRVAKSLGLQLQHSI
                     GNANRDTINILRILIYGFICFALLYYTQRRIKRKKNDRN"
     gene            35664..>35838
                     /locus_tag="RTF91_000325"
     CDS             35664..>35838
                     /locus_tag="RTF91_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943253.1"
                     /translation="MIETKKSFWPYGILLSLLAIIIACIVTIFIASYYPVYEDDFYFD
                     SYQNVENNYNKIQK"
BASE COUNT        12786 a         4503 c         6458 g        12091 t
ORIGIN      
        1 aaatacccct tacagaaaag taactagatg aataaaaatt ttattttaat aaatttaagt
       61 tttatcttat cttatacgat ttataataga tcatgcttta aattagctgc ttaaggagaa
      121 aaaatgaaaa acattatctt aggtttagca gtcattgttt cattatctag cattgcttta
      181 gcttcaaatc atagttatca tagcaagaaa aatcttagca atttacaaca agatggaatt
      241 ttaacttgcg aaaattttca taattgccag acaacaaatc aacctattta ccaacatcaa
      301 gcttgtgcta aattaggtat ttgcataaat cactaaagga ttattatggg attagtatat
      361 tctcaatgtt gcaatcaagt tattgataca agtttgtatt atacagcaaa accattatta
      421 aaacttgaac aagctagact tgaacaagag aaaaaaactg aaaatgataa tgtaaaaaaa
      481 gtagaaaccc aagctaaaaa agtagaagaa caaagcgatt ctacaaatat tgataatcaa
      541 gcagataaac ttttagatat atctgcttaa tcttaaaata tgctttaatc tccttaaagg
      601 ataacaagct atccactgct tgtgccaagt gtcgagcttg taaggggtgt gacccttaac
      661 ctctagtaaa aatcaaaaat catttattga tttttactta gccattttta aacaccaaaa
      721 tgagaattta aaaatgccaa aaaatatcct gaagtgcatg gcttagaaaa aaatcttgcg
      781 atactaaaaa atataaagat gatgcaaata aagaagatta tgaaggtaaa attagtttca
      841 tacaacagta aagtatttac atgaatgaat tagatgttat tgtatgataa aacaaagtgc
      901 tgataaaatc atcgctgaat acaaaaaaag atttgtagag tatgcaaaaa ttaccactgc
      961 tcattgtgat cctaaaaaca acccgcatta aattacaaat ggaacaacga taaagctaaa
     1021 acaattagaa aaaaacttac acacctaaac aaattattct tacactagcg atgaagcaag
     1081 gaaaaacatc gataagttat ataaaaaaat ttataaatat tgtgaaaata agaacggctt
     1141 aactaaaagc agaaagccta aaggactttc aaaattttac caaaaaagaa aaatgctacc
     1201 acgagtttat atacgaaatc ggcgaaaata ctacaatgaa gtaatgctaa gaactcaagc
     1261 aaaaaatcgc agagcctgca ggatttacac cttgcaatcc atagagatga agtaagcaga
     1321 atgctaaaag ggaaaaacaa acccatgccc acgtagtatt ttacacttga tgaaaacaag
     1381 cttgaaaaag ccaatcttag aaaaatacat aaccgcacaa agtttaaaat ggataatcgc
     1441 tatgagaata acgaaaagca accttaatac atgcaagatt ataaaactta tgctcaatat
     1501 aaagaacaag agcataaatt aacacaaata gctctagaat taaaaaagaa attttttata
     1561 aggtttaaaa agttaaaatc gaaagaaaat gaattgcaag agaaaataga gcaacacgaa
     1621 aaacatatac aaactttaga actaggacac caaaaaagct ttaaatgaac tcacgcaaga
     1681 atttaaaagc gtttgagcct atggaaaaac attttaatcc ttggagaaaa catatgacaa
     1741 gaatgccttt ttataagcat caatgaaaga aaaaacaagc tagtaaagat ttagaagagt
     1801 taaaatttga atatcataga gtcaaagatg atagagataa tttaaaaact ttgtttgaag
     1861 tacataagaa aaaatgaaag attagaaaca caactaaaag aaatattccc aaagaaagct
     1921 gaaagaactt aagtatcaaa gatcttttga aaatcttttg aacaatcaaa aattaaaaga
     1981 aaccatagag agtttgggtt tagtagatag tttattcctt tttagtttag taaatcgcca
     2041 ttaggtataa tgatttgcgt aaatagggta aggggtgtga agctttccta gaaaaagcta
     2101 atggaaaagc cctttaattt atatcatcaa aaatgttttt ttaagataaa aattctctca
     2161 cgcgtatttt tatagggctt tctaagccct atatagcgta ggctagctaa atattatttt
     2221 accataaaga aatttaaaca agggaatttt gattgaataa gttttgtgta aattaaaatc
     2281 agaacaaaat tccctaaata attctaaggc ataaagataa tatccaccaa gctttcattt
     2341 tctaaaattt cacatttctt tgaaactatc atgagggcag ctttgttatt aaggttgttt
     2401 ataatcgcac ttgagccttc ttttttgcct tctaaatttg ctaaaatacg cccattttta
     2461 aactctatat tgcaagctac aaattccaaa taaggcgttt ttttcttata gctaccttgt
     2521 aaaaaggctt tgcaaatata gtctttaggt tgaagtagcc aagagtttaa aatttctctt
     2581 gcataaagat taaacattac catagctgag taaggaaaac ctggtaaagc gatgatgaat
     2641 ttttcattgg ctttagctat tttgatatgt ctacctggtt ttatatctgc tttatcgatg
     2701 atgatttcat actcttttac agcttttttt aaaaagtcaa aatcccccat agaaacccca
     2761 cctgttgtga ctaaaatatt acaactttgc aaagcacttt caagggtaga aaaagtagct
     2821 ttttcatcat cttttaaaag tggaaatact cttgtttcac agcctaaatt tttggctaaa
     2881 ttagctatgg caatatgatt tgaagagcgg atttgagcag gattttctaa gacttctcct
     2941 agatctttaa tctcatttcc actacttaaa actcctataa caggctttat aaacacgcta
     3001 atgtgaaaaa atccaagttc agtcaaaaga gctatctcgc tataatttaa ctttgtacct
     3061 tttttcagta aaatttcatc ttttttatag ttttctccta tcgcccgtac agcaaaagct
     3121 tgagaaactt ttttttctat aaaaagggtg tcattttcta cacgtacatt ttctacagga
     3181 actaaagtat cacttccttc gctcatcagc gagcctgtaa aggtttttac acaggtgcca
     3241 ttttggacga taaattgggg catggtacct gcaggagtga tacctaaaat ttttaaagcc
     3301 ttgtcttgat cttcaaattt gattgcataa ccatccatag ctgagattgg aaattcaggc
     3361 tgatttttac tcgcttttat atcttgagct aaaatgcgtc ccaaacactc tgtaatagct
     3421 attttttcaa tcttttcata agctttgata tgagagtgta agatttttaa actttcttca
     3481 taagacatta acattagcta cccttttaaa agtcctgcac cgcaaagttt agtcgatctt
     3541 tctttggcgt aaattctttc tttgtttatg atatcgtatt tccaaatagg tgcgcttgct
     3601 ttaaaatctt caacaaattc attaagaagt ttaagtccta attttctttg tttgcttaaa
     3661 attcctgcaa aatacgagct ttcatgtata gccacatcac ctatagaatg ggcaaaaagc
     3721 aaggtaatac catcaaattc tactcttttt tgccattcat caaaccattt ttttaaaagc
     3781 ggttcataaa tgtcaaagct aagtgcttta atacctcctt cttcgcgtac aatcccacaa
     3841 aaagttagca aagtaccgca gtttttatcc ttggcaaatt cataccatag gctataaatt
     3901 ttaggaattt ctaaggagcc ttgataaagt gtaaaatgat ccatttaacc cccacaaact
     3961 ggcggtaaaa gtgctatttt atcaccatct tttaagttag tgttttcatc aaaaataatt
     4021 tcatcattta aagatacggc acaaagttct agccattctt ttaaattctc atctttttgt
     4081 aaaaattctt ttaattcttt taggtttttt actttaagtt ctaaattttc tttatttatg
     4141 gggcctaaaa attccacttt taccatttta ttcctttact tctaaatttc ccatcattcc
     4201 taaatcttca tgttctaaaa tatgacaatg atacattcta agtcctttaa aatcttgttt
     4261 cattctaagt cttagctctt cattggggag tacatttata gtatctctta aggctctaaa
     4321 ttcagctttt tgaactttgc catttagttt tgatgagatg agttcaaatt gtgtgccatg
     4381 tatatgaaaa ggatgatcca tgtgggattt gttaattact atccaatctt caactacacc
     4441 aactttagaa cttaaatcaa tacgttttaa atcataggtt ttgccattca ttaaaaacat
     4501 agaagcaaga gcagttttta actcactttc acttttactc atcatatcat gcattttcat
     4561 atgatcttca ctcataatta tttctttaaa ttccttaggt tcttctgaag gtttaaaaat
     4621 ttttaaattt tttggaaatt ctaaattttc tttttttaga ctaatatcag ctaaaaataa
     4681 ggtattaggt tcttctttta ccatcatttt atctctatca taataagtgc tttctagtgt
     4741 aaattctcca tcttttaaag catcgattaa aacttctaca cgagaagcag gacttaagaa
     4801 aagctcatct ttaaaaatag gtttttctat aagccctcca tcagtaccaa caagtataaa
     4861 tttaacccct tgtatgcgta aatttaaata tcttgccgca gtagcattat aaatgcgtat
     4921 gcgttcgttg gtggcgagtt tgattttagg tttaaattgt ccattgataa gtacaaattc
     4981 accttctctg ccattaagcc aatcatttag gttattgttt ggaatttgag cgttttcatc
     5041 aaggcgtaaa tcactaatca taagatcttt ttcttttaaa tgacttaagg catctttttt
     5101 tgctttaatc acaaaagccc ctgctaagcc catgaaaact tgtttagaag tagtaaaatg
     5161 agggtgtgga tgataccagt aagttcctgc actatcttga ggaatttcaa aacgatatgt
     5221 tttttcacct cctgctagaa taggatcatg cgggcttcca tcttgatcag gcggtacagc
     5281 aacgccatgc caatgtatgg ttgtagcttc tttgagttta tttttgacta aaatttcaag
     5341 cttatctcct tcaaaaactt ctatttttgg agcaggtact aagccattgt aagtgtaaaa
     5401 taaggttttt ttacctttga tgagttctat gtggttttct ttgatttcta tagtggcacg
     5461 aaaaatattt ttttctttac tttcattttt gagtaaaggt agagctttta aaatttgtcc
     5521 tttgggaaat tgttttgggt ctaaaagttt taaatttttt ggagcaaagt cgataaaaga
     5581 agtgtctaaa tgatgatttg tgttgttatt tttatgcatg gagtgcatgt catgcatagg
     5641 attagcataa gctataccca tgcttgctag agtgagtgta ttaaatttta aaaaatttct
     5701 cctattcatt tttttccttt tgcttgattt tttgtattat aatcattatt tttttagttt
     5761 tagtaaatat ttgttttgaa aatttggctt tatttgttat gattttagcg atttaatcaa
     5821 ggaaaaatta atgttttatg aaaaaattca aactccagct tatattttag aagaggataa
     5881 attaagaaaa aattgcgaac ttttagcaat ggtgggccaa aaaagtggtg ctaaagtact
     5941 tttagcctta aaaggttttg ctttttcagg ggcaatgaaa atcgtaggag aatatttaaa
     6001 aggttgtact tgcagcggac tttgggaagc aaaatttgcc aaagaatata tggataaaga
     6061 aattcatact tattcgcctg cttttaaaga ggatgaaata gatgaaatag ctagtttatc
     6121 tcatcatata gtgtttaatt ctttagctca atttcataaa tttcaagcta aaacgcaaaa
     6181 aaattctata ggccttcgtt gtaatataga attttccata gctccaaaag aactttacaa
     6241 tccttgtgga agatattcaa ggcttggaat tcgtgctaag gatttagaaa atttagattt
     6301 aagtggcata gaaggacttc attttcatgc actttgtgaa gaaagtgccg atgctttaga
     6361 ggctgtttta aaagcttttg aagagaaatt cggtaagtgg atagggcaaa tgaaatgggt
     6421 gaattttgga ggaggacatc atatcactaa aaaaggttat gatgttgaaa aacttattac
     6481 tttgtgcaaa aatttcagtg ataagtacgg tgtgcaagtt tatcttgaac ctggtgaagc
     6541 tgtgggttgg caaacgggaa atttggttgc tagtgtaata gatatcatag aaaatgaaaa
     6601 acaaattgct attttagata cttcaagcga agcacacatg ccagatacta tcatcatgcc
     6661 ttatacgagc gaagttttaa acgctagaat tttagccaca agagaaaatg aaaaaaaatc
     6721 agaattaaga gaaaatgaat ttgcttattt actaacagga aatacctgtt tagcgggtga
     6781 tattatggga gaatacgcct ttgataaaaa gcttcaaatc ggtgataaaa tcgttttttt
     6841 agatcaaatt cattatacta ttgtaaaaaa tacaactttt aatggtataa gacttccaaa
     6901 tctcatgctt ttagatcata aaaatgaact tcaaatgata agagaatttt cttataaaga
     6961 ctattcttta agaaattaat attatttata atttgcataa aatgttaatt ttgtttgaaa
     7021 aagtattaaa gagataaatt tttatgtaaa ctatttgatt ttttaaaata taaaatcgat
     7081 ttaaatatct aattttaaat agtttagtat gatttttaat attttaaatc cttatgaaat
     7141 tttactaaaa tttcagtgat ttttaaatca aatagtatta agataaattg atttaaaaat
     7201 cggctttaaa atgaatatta ggtatatttt gcataatatt cattcaagca aaatttaaag
     7261 ctatttttga aaatttttga atgcatggga gctttaatgg acttagaaaa attaagatta
     7321 gctaggagtc tttattatca atgtctaggt gagctttttg tcttttcatt ttctaaggaa
     7381 agattgtcaa aattacaaga gtatttaaag acaatgcaag aatgtttatt tgatgaaaat
     7441 ttaaaatcaa gttttgatat tttgctcaaa cacttagaag atgaaaattc tatacaagca
     7501 ttttttaaag aatatgattt gcttttttta agtcttaaaa acagcattcc aacaactttt
     7561 tcttatatag aagaaggttt tgaaaattca aaccctttac tttgtgtgcg tcaaatttta
     7621 gttaaaagca aaataagacg caatgaaaaa atttttaaag aaagtgaaga taatgttgga
     7681 ttttgtttat tgttgatgag tgaattttta agacaaaatg aagatgattt agccaaagaa
     7741 ctttttgaaa aagtaatcaa taagagtgtt gatgagtttt taagtgatgt ttttatgaat
     7801 aaaaatgcaa atttatataa agaaattgca agtattgcat cggcttttat ggaatttgaa
     7861 agactttgtt ttgaagtgga aaagcctgca aaaatgaatt ctaaaaaagt gcaaaatgat
     7921 ctatcgcgtt cagaattttt aagaagagaa gcaaataaac aaaggagaac tcgtgaaaaa
     7981 tcgcagagaa tttcttaaaa aatccgcttt tgccttagga gctgctggaa tgcttggtag
     8041 cacgacttta gctcttgcta aagatgaaga aagaaaagat ttggtcaaag gtaaaagtaa
     8101 gaaaaaagaa gtgctttttc aaagaagtgc taattgggaa aattattata taaaggctga
     8161 gtaatgtcaa gtgtaggtga aaatattaag cttacgcgtc gttcttttct taaaatggca
     8221 gcactttcaa gtttagcaac accgttgctt gctagaaatg aaaccttaag agaagcgagt
     8281 gttgatgagc ttaaagaagc gtatgaagac agtaaaaaag taaaaacagt ttgtacagct
     8341 tgttctgtag gatgtggaat tattgcagaa gtgcaaaatg gtgtttgggt acgtcaagaa
     8401 atcgctcaag atcaccctgt aagttcaggt ggacactgct gtaagggatc tgatatgatt
     8461 gatatggtgc gttcacatgt acgtttaaaa tatcctatga aaaaagaaaa tggagaatgg
     8521 aaacgtataa gttatgaaca agctttaagt gagattggag aaaagctagc tgcttatcgt
     8581 aaagaaaatc ctgaaagtgt tatgttttta ggttctgcaa aacttaataa tgaacaagct
     8641 tattatataa gaaaatttgc agcgtttttt ggtacaaata atgtagatca tcaagctaga
     8701 atttgacaca gtgcaacagt cgccggtgtg gcgaatacat ttggttatgg cgctatgaca
     8761 aaccatcttg gagatattca aagaagtaaa tgtatcatta tcattggagc aaatccagcg
     8821 gtaaatcacc ctgtaggttt tagacatttc ttaaaagcaa aagaaaaagg tgcgaagctt
     8881 atcgttgtgg atcctagatt tacaaaaagc gcagcaaaag cggatattta tgcaagaatt
     8941 cgtccaggaa ctgatattgc tttcatgtat ggaatgctaa aaatcatttt tgatgaaggt
     9001 ttagaagata caaaatatct tgatgaaaga gtttttggaa tcgataaaat tcgtcaagag
     9061 gcagcaaaat ggacagctga agaagtagaa aatgttacag gaatttctaa agaagtttta
     9121 gtgcaaatta ctcatgaagt agctaaaaat aaaccaacta cacttatttg ggctatgggt
     9181 ttaacccaac acaccgtagg aacttcaaat acgcgtttag ctcctattgt acaaatggta
     9241 cttgggaata taggtaaatt tggcggtgga gtaaatatct tacgcggaca cgataatgtc
     9301 caaggtgctt cagatatggc atgtttgagc gaaaatttac caggttatta tcctttaaat
     9361 gaagtaactt ggaggtacta tgctaaaatt tggggtgtag attatgagtg gcttttagga
     9421 aattttgtaa gtaaagattg gatgcataaa accggccttt cgcttgctag atggtgggcg
     9481 gcagctttaa atggtaaaga tggaaatgat gccattgata atgcaggaac gcctttaaaa
     9541 gctttagtgg ttatgggaaa tggaatcact tcaactgcac agcaagttaa agtaaaagaa
     9601 ggtttggagg ctttagagct tcttgtttta gccgatcctt ttgtgaatga agcagggatt
     9661 attgcagaga gaaaagatgg aatttatctt ttgcctgcag caacacagtt tgaaacaagt
     9721 ggaagtgtaa cagcaacaaa tcgtagtggg caatggagat ttaaagttgt agatccactt
     9781 tatgaaagca tggaagatca agaaatttta tttgaacttg ctaaaaaatt aggcttttat
     9841 gaagacttta ctaagacttt gcgtgatgaa aaaggcaaaa tcgtttggcc tgaaaatgct
     9901 acaagagaaa ttgcaaaagc agttagaagt atagggctta atggttggag tcctgaaaga
     9961 cttaaaaaac atactttgta ttgggataaa tttgatgaga taactttaga aggcaaagat
    10021 gaagttgcag gtgagtatta tggacttcct tggccttgct ggagtgataa acatccaggt
    10081 tctcctgtgc tttataacac tgatattgaa gtggcaaaag gtggcatggg ctttagaaat
    10141 aattttgggc ttgaatatga aggagagagt ttattggcta aaaatgcacc tttaaattcg
    10201 cctattaata caggttatcc acaaattacc aaagataaca tagaaaaagt tttaggcatt
    10261 actttaagtg cagaagaaaa ggataaaatc ggatcaactt ggtcttatga tgatagcaat
    10321 atcatagcaa ctaaatgtat agaaaaaggc atagttcctt atggaaatgc taaggctaga
    10381 gccgtggttt ggacctttaa agataaaatt ccacttcacc gtgaaccttt gcattctcca
    10441 agaaatgatt tggtgcaaaa atatccaagt tttgaagatc aaaaagcact ttatcgtgta
    10501 gatactaaat ttgtttctgt gcaacaagct aaggattatt ctaaagaatt cccactcaat
    10561 cttgttaccg caagacttgt aaatttaaac ggtgcaggta tggaaaatag agcatctatg
    10621 tatttaacgc gtttaacacc tgaaatgttt tgtgagatta atcctgagtt agcaaaagag
    10681 caagacatta aagcaggaga tatgatttgg atacattctc cagagggcac taaaatttat
    10741 gtaagagtga aggttaatcc aggtgtggca aaagatatga ttttcctacc tttccatttt
    10801 accggaataa tgcaaggtgt ggatttaacg cacaatttcc ctaaaggaac taagccttat
    10861 gcaagtggag aaagtgctaa tactgtaaca aattatggtt atgatatcat gtgtcagatt
    10921 ccagagacta aaggtgggct ttgtaaaatc agtaaggatg gaaaatgagt aaggtaaatt
    10981 ttgcaaattt agaaaaagaa cgcttaaaat ttttttgcga taatgagcgt tgtattgact
    11041 gtaatggttg tgcggtagct tgtgatgaag cgcatgaact tcctattcac attcgccgtc
    11101 gccgtgtgat tactttaaat gaaggaattc aaggaaaaga agtttcaact tctatttctt
    11161 gtatgcattg tgatgatgct ccttgttcta ttgtctgtcc tgtggattgt ttttatatcc
    11221 gtgctgatgg tattgtttta catgataaag aaatttgcat aggctgtgga tattgccttt
    11281 atgcttgtcc ttttggtgca ccgcaatttc caaaagatag tgtttttgga aataaaggca
    11341 ttatggataa atgcactatg tgtgcgggtg gtcctgaagc tacaaattca gaaaaagaga
    11401 gagaacttta tggacaaaat cgtattgcag aaggcaaagt tcctgtatgt gcagccatgt
    11461 gttcaacaaa agcgctttta gtgggtgaaa gttctaaaat agaacagatt tatcacaata
    11521 gacttatgaa tagaaattat ggcattccaa atccttcgga aagtttggaa tggaagattg
    11581 cttacacggg aaaggaacgc ttatgagaaa agtatttgta acgcttttat taagcgtagt
    11641 gagtttattt gcttatggta atgaaagaat gggacaagat actcaaattt gggattttca
    11701 tcgtattaca aatattccaa attatgatac ttttggcaag ctttggacaa ctttacaagg
    11761 tgaatacata gctactatag ctttaattgc tgttattgct gtgttggctg cttttgcttt
    11821 gcattacatg gtcataggtc ctaagcaatt ttctcatgat ggaaagaaaa tttatgcttt
    11881 tactttattt gaaagacttt ttcatttcat tgcagcaatt tcttgggtaa ttttagtacc
    11941 aacgggtttt gtgatgatgt ttggagcaac ttttggtggt ggagtttttg taagggtttg
    12001 taaaaattta catgcttttg cgacagtttt atttatcatt tccattattc ctatgttttt
    12061 atggtggatt aaaagaatgc ttccggcaag ttatgatatc agatggatga tgatagtggg
    12121 tggttattta agtaaaataa aacgccctgt gcctgcgggc aagtttaatt ttggtcaaaa
    12181 atcttggtat tatatcgctg tatttggtgg atttttgatg ataattacgg gtggatttat
    12241 gtattttctt gattttaatt ccacagcaat tcaaggtctt tttggtttaa ctcaaattga
    12301 acttttaaga atttcagcca tagtgcataa tttcttaggt atagtgtgcg cagtattttt
    12361 tggtgtgcat atttatatgg cagtgtttgc aatcaagggc agtatccatt ctatgatcag
    12421 tggctataaa gaagaagaag agatttatat tttgcattct tattggtata aagaattaag
    12481 taacaaaaag caaattgaac ctagtttttt ttatgatcct aatataaaaa tttaattttt
    12541 atcgctatgt tattgcatag tgataatttt aagttttttt gaaataaata aaactaattt
    12601 ttcttttata aattaattct aaaatctatt tttccatata taaattttag ttatttatgt
    12661 ttttttgata taatattatt taaagatatt ttaaggataa ggtatggatc cgttatttac
    12721 aactcaaatt ttaaaataca aaggtgatga atcttttaca tgtaatgata ctttggtgcg
    12781 tgaaattaaa cttgaaattt ttattaatga tgaaaaagta ggtgctttaa tggcaactcc
    12841 tgtagatgaa caagcgttgg caataggata tttgatgagt gaaaatatca ttgctaaagt
    12901 aagtgatatt gaaagtataa aaacaaaaga tgatggcatg agtgtgttta tcaaagcaaa
    12961 aattgataaa gaaaatttag caaaacttaa tgccgaaggt gtagtaataa gtggttgtgg
    13021 tagagcacat actgcaaata tagatttaga ggctattgaa gcaagtaaaa ttagttctaa
    13081 tgtaaaattt agcaaagatg aaattttaaa acaaatgagc actttttata ctcaatgtga
    13141 gctttatgaa aaaacaggct gtgtgcatac agctaaactt tttgtagatg ataaaacttt
    13201 ttttataggt gaagatattg cacaacacaa tactatagat aaagctttgg gaaaagcatg
    13261 tttagcaggg gttgatttaa gtcaatgttt tttaatggtt agtggaaggc taagttctga
    13321 aatggtagct aaagcagtta tgcataaaat tccagtactt gtttcacgca ccgcccctac
    13381 ttgtttaggg gttatgatag caagaaaatt taatttaaca ctttgtggtt ttgctagaga
    13441 aaataagata aatatttata gtggagaatt tagaattcat ggataaaaat caagaaaaag
    13501 aaattatttc ttatatgaaa gaattgttaa atagcaatga aaagttagat tgtggaacag
    13561 cttttaaaat tgcaaaaaaa tttagtgtaa atatagaaaa aattggaaaa ttagccaatg
    13621 aaaatcatat gagaattgat aattgcgaat tagggcaatt tggacattta gactttgaaa
    13681 aagcaaagat tgaggtgctt aaaaaaatag aacccagttt agatgaaaag cgtagaattt
    13741 tttgtaaaga cgcaagagat attgctaaag aagattgtgg acttaaaagt atgcgttcag
    13801 ctttaaaggc ttataaggtt gatgtaaagt attgtcaact tggctgtttt aaagaaaaaa
    13861 aaggtaagca atttatagta agaacaaaaa cttggataga aaatgcagat ggagatttgc
    13921 tttttggaaa aggaaaaacc gaacttttag aacttattgg acaaacaggt agtttacttc
    13981 acgcttctaa gcttatgggg attaattata aaaaagcttg gatgcatttg caaaccttgc
    14041 aaaaaaattc tcaagaaatt ttagttagca caagacaagg acgttctaaa gaatcaggaa
    14101 caaaacttac tcctagagcc atggaattga tggaaaatta ttctattttg caaaaagata
    14161 tcgaagaata tgctaataag cgttttaagg aattgtttct aaaaggaaaa aaataaattt
    14221 tttgtcgtaa caatactaat acatagtatt gttataatta attaacgtta ttttctaaaa
    14281 atatgttaaa attacaatct aaatttttat ttttaggagt tatagatgtt taaatcttta
    14341 aatataggtt taaagcttat tttttctgtg gcaactgtcg ttgttattgg gcttgttatt
    14401 ttaatttctt taattacaaa acaagtaagt caaaatatta ctaaaaacac agaagatatt
    14461 cttgcttcta ttacaaaaga atatgctacc caaactcaag gaatttttgg agaaatgatc
    14521 gctttaaata aaagtatttc aggaacttta acagaaatgt ttagatcaac ttccaaagaa
    14581 aatttagata tagatagtat aacaaatatt ataactaata cttttgataa tagtgcttat
    14641 tctaatttca cctatttata tttaattgat ccaccagaat attttaaaga agaaagcaaa
    14701 tttttcaata ctcaaagtgg aaaatttgtt atgctttatg ctgatgaaga aaaagataac
    14761 aaaggtggaa taaaagcaat acaagctagc gatgaaatag ctaatttaca agttgtccaa
    14821 gatatattaa aaaaagcaaa gtatggagaa aacaaagtat atataggtcg tcctattagg
    14881 atgaatttag aaggtcaaaa ttttaatgct gtaaatgttg ctatgcctat ttttgatcaa
    14941 aagaatcaag ttgtaggtgt tgctggtatg actttggatt tttcggctat tgctagttat
    15001 cttttggatc ctaagggtca aaaatacaat ggagaattaa gagctctttt aaattcagat
    15061 ggttttgttg caattcatcc tgataaaaat ttggttttaa aaaatttaaa agatgttaat
    15121 cctaataaag gtgcacaaga gacctataag gctatgggtg aaggaaaaaa tggagttttt
    15181 aactatatag cttctgatgg tgatgattct tatgctgcgg ttaatagttt taaagtacaa
    15241 gatagttctt ggacagtttt agtaactgcc cctaagtatt cagtttttga acctttaaaa
    15301 aaattacaat taattatcat tggtgcatct tttattttta tttttattgt tttaggagtg
    15361 gtttattatt gcgtaagaaa aattgttgca tctagattgc ctgttattct tagttcttta
    15421 gaatcatttt tccgtttttt aaatcatgaa aaaattgaac ctaagactat taaaattcgt
    15481 gctaatgatg agttaggagc aatgggtaga attataaatg aaaatattga aaagattcaa
    15541 atgtctttaa aacaagatca aaatgctgtt gatgaatcgg tgcaaactgc tagagagatc
    15601 gaaaaaggta atttaactgc aagaattact aaaaatccta taaatcctca actagtggaa
    15661 cttaaaaatg ttcttaacag aatgcttgat gctttgcaaa ataaaattgg ctctaatatg
    15721 aatgaaatta atagagtttt tgatagctat aaggctcttg attttagcac agaagtattt
    15781 gatgctaaag gtgaagttga aattacgact aatattttag gtaaagaaat taaaaaaatg
    15841 cttgtagctt cttcaaattt tgctaaagat ttggctaacc agtcagaaga gttaaaaaat
    15901 tctatgcaaa aacttgctga tggttctaat gctcaagcaa gttctttaga acaatcagct
    15961 acagctgtag aggaaattaa ttcttctatg caaaatgtaa gtggaaaaac agttgaagtt
    16021 gcttcgcaag ctgatgatat taaaaatatt gtcaatgtga ttaaagatat tgctgaacaa
    16081 accaatcttc ttgctttaaa tgctgctatt gaagctgctc gtgcgggaga gcatgggcgt
    16141 ggttttgcag ttgttgcaga tgaggtaaga cagcttgcag aaagaacagg aaaatcttta
    16201 tctgaaattg aagcaaatat taatatactt gttcagagtg taaatgaagt agcagaatct
    16261 gtaagagagc aaacagcagg gatcacgcag attaacgatg ctatagcaca acttgaaagc
    16321 gtaaccaaag aaaatgttga agttgcaaat gttaccaata atataacaaa tgaagtcaat
    16381 caaattgccg cagcaattct tgaagatgtg aataaaaaaa gattttaaaa aagctcattt
    16441 tttgagcttt taaattttct tttatatatt ttaaatttta aacacaaaac aagtaataaa
    16501 ataatattac tttccaaagt tctaatatca aggaaaaata atgaaaattg attgtcgtaa
    16561 tctttcttgc cctcagccta tagttgaaac aaaaaatgct cttgaaaagc ttcaagaagg
    16621 cgaaacttta gaaattattt taaattcttt tatttcaaaa aataatgttg taaaatttct
    16681 taattcttta aagttaaacc ccatcgtaga tgaaaatgca caagagtttt atatcaaggt
    16741 gcaaaaaaag aattttaatt ctagtgaagt aaatgtacat gattatagtg ttttgttttt
    16801 aaaaactgac aaagtaggta agggtgaatt agggcaaaat ttacttgtag gatttttaaa
    16861 tactttaaaa aatttagatc atgctccaag taaaattctt tgcgtaaatg aaagtgtttt
    16921 aatcaatgtt gatgaaaatc ataaggcaca tttagttatg aaagaacttg aaaatttagg
    16981 tattgaaatt ataagttgtg gagcttgttt agaatttttt aataagagta aagagcttaa
    17041 aataggaagt atgggcaatg cttatgaaat tttaaatgaa ctttttagta aagcaaaaat
    17101 cattactcta taaggaaaaa tactgaaata taaaaatcaa aatttaacac attttgttaa
    17161 agcggcaggt tgagcagcga aattaagccc gggtggtctt aaaacaattt taaatttcat
    17221 gcaaaaatct cccgctttgc ttagtgatat cggtaataat gaagatgcaa gtgtgtatca
    17281 gatcagctcc gatttggctt tggtgcaaac gcttgatttt attacacctg tggtgaatag
    17341 tgcttatcat tttggagcta ttgctgcagc aaatgcttta agtgatgtat ttgctatggg
    17401 tgcagaggtg attaacgctt taaatatagt aggttttgat gcttgtaatc atgatttaag
    17461 tcttttaaaa gagcttttag aaggagcaaa tgacaaggtt caagaatgta atgctttaat
    17521 tgtgggtgga catactatag aaagtagcga gctttttttt ggacttagtg ttacaggaaa
    17581 agtgcatcct agtaaattta tcgccaataa tactgctaaa attggagatt gtgttattct
    17641 aaccaagcct ttaggaacgg gagttttaag tacggcttta aaggcacaaa tgctaaaaca
    17701 aaaacattta gatacaatgc ttgaaagtat gatggaatta aactataaag ccagtcaaat
    17761 cgctcttaaa tttcatccaa atgctatgag tgatgttaca ggttttggtc ttttaggaca
    17821 tttaaaagag atgttaaatg agaatatttc ttttgaaatt tttgaaagcg aacttccttt
    17881 tttagatggg gcaaaagaat attttaatat gggtttaatt cctgctggag cttataaaaa
    17941 tttagaattt atgaaagaaa ttaatcctaa tttaaatgaa gaaaaattat tgctttgtga
    18001 tccgcaaact tcaggtggac ttttaatttc cataagtgaa aaacaagctt tagaatgttt
    18061 aaaaaaatta gaagatgaaa atattcaagc taaaattatt gctaaggtta taaataagca
    18121 agaaaatgat attatcattt cttgattttt gttacctata tactcattaa aaattttttt
    18181 atcatttttt atacattttc tatgatttaa aatattattt tatcttattt aatatattat
    18241 ttattaaaat ttatttttac cttaggagat aaaatgatac aaaaagcttt ggttttagct
    18301 gaggagttgc aaaaaaaaat agaattaaat atttctaatg cagaaaaaga atttcattca
    18361 aaaatgcaga agcttcttaa caatcccaaa aacaaagtta tgcttatcga gcttttagat
    18421 cgttctttta gatgcaaaaa taaaaatgca agttttgaac ttatagaata tactttaaat
    18481 aaatatggta tagctgattt ttttagtgcg tttgaaaaat tcctactttt tagcttttta
    18541 aattttggta aatttgcacc aagtttgagt gtgccatttt ttataaaaca tttaagagaa
    18601 gatacaaaag ctatggtttt agatgcaaat cctaatgtat tagagcctca tattaggaaa
    18661 agaaaagaac aagataaaat tactttaaat gtgaatttaa ttggcgaaga agttttgggc
    18721 gaagcagaaa gtaaatatcg catgcaaaag tatgaagaag ccttaaaatc aagttatatt
    18781 acgtatattt ctattaaaat cactaccatt ttttcacaaa ttaatattat agattttgat
    18841 tattctaaag aagaggtggt aaaaagatta gattatcttt atgccttagc tttagaagaa
    18901 gagaaaaagc aaggtttatc taaatttatc aatcttgata tggaggaatt tagagattta
    18961 gagctcactg ttgtagcttt tatggaaagt gtggctaaat ttgatatcaa agcgggcatt
    19021 gttttgcaag cttatattcc tgattcttat gagtatctta aaaaactttt tgctttctca
    19081 aaagagaggg ttttaaaagg aatgcagcct ataaaaattc gctttgttaa aggtgctaat
    19141 atggaaagtg aagaaaccat tgcaagccag aggggttggg aacttcccac tttttataaa
    19201 aaaatagata ccgatagtaa ttataataaa atgcttgatt ttatccttga aggagataat
    19261 tataaataca ttaacattgg tatagccagt cataatatct ttgaaattgc ttatgtttat
    19321 acacgtatta gtgaagcggg cgctttaaaa tcttttactt ttgaaatgct tgagggtatg
    19381 agtttgcaat gttcttatga attatctaaa atgcatgatt taattcttta tgctccagtt
    19441 tgtgatgaag aacattttaa caatgctatt gcttatcttg taagacgtct tgatgaaaat
    19501 actagtgaag ataattttat gcgttatttt ttcaatctta aagtaggtga taaaaattgg
    19561 aatatccaaa aagaactttt tttaaaatct ttagaaggta taaaaaatct tgataatact
    19621 acacatcgta aacaagatag aaataaagag tcaaatattg taagttcgta tgagagtaaa
    19681 aaatttaata acgaaagtga tacggatttt gtcttaatgc aaaatagagc gtgggctaaa
    19741 gatattaaag tcaaatatga aaatttaaaa gattatgatg tttatcctgt tataggtgat
    19801 cttgatttta aagcagcaaa tttaaatgct ttagaagtta aagataagat taaaaacaat
    19861 cttataggaa aggcttattt agcaggagaa aaagaaatca aacaagcttt agaaatagct
    19921 aaaaattcta aatttacaca aaaaagccat gatgaaatct atcaaatttt agccaaaagt
    19981 gcaaaactta tgagggaaag aagaggtgat ttaataggct tagcagcttt agaagtggga
    20041 aaaacctttt tagaaattga tcctgaagtg agtgaagcca ttgattttac agagttttat
    20101 ccacattctt tagaagagct taaaaaacaa aatccaaaag ttcaatttag tcctaaaggt
    20161 ataggtgtta ctatagctcc ttggaatttt cctataggaa tttcagtagg tactatagct
    20221 gctcctttgg ctgcgggtaa tgtggttatc tataaacctt cttcgctttc aattctaaca
    20281 ggttatatgc tttgtaaatg tttttgggat gcaggtattc caaaagatgc tttgattttt
    20341 ctaccctcaa aaggaagtga tgtttctaag tatttacttg ttgatgaagc aattaaattt
    20401 tcaattctta caggaggaga ggataccgct tatgctatgc taaaagctaa tccaactttg
    20461 cttttaagtg ctgaaacggg tggaaagaat gctactatag tttctaaatt tgctgatcgt
    20521 gatagtgcga ttaaaaatat cattcattct gcttttagca atagcggaca aaaatgttca
    20581 gctacctctt tacttatttt ggaagaagag gtttatgatg atgaagaatt taaaaagact
    20641 ctagtcgatg ctgcaagttc tatggctgtg ggtagtcctt ttgaatttaa aaataaatta
    20701 ggcgctttgg ctgataagcc aagtcaaaaa gttcaaaagg ctttaaatga attgcaaact
    20761 tatgaagaat gggcgttaaa acctaagttt ttagatgata atccttattt gatgacacca
    20821 ggtataaaat acggcactaa aaagggggat tttactcata tgaatgaact ttttgtaccg
    20881 attttaagcg tgatgaaggc taaaaattta aaagaagcta ttgatatagt aaattcaacc
    20941 ggttatggtt taaccgcagg ttttgaaagt ttagatgaga gagaatggga gtattttcac
    21001 actcatatag aagcaggcaa tatttatatt aataaaccaa ccacaggtgc tatagtgttg
    21061 cgccaacctt ttggtggaat caaaaaatct gccataggtc taggtagaaa ggttggaatt
    21121 tataattata ttactcaatt tttagagatc aaacaagaag gttttgatga tcatctaatc
    21181 gaagagaaat tttcaaaaaa attagtacaa ataaatttaa aagaaataaa agatattgtc
    21241 aatgacttga ttaaaatgtc tcaatcttac gcttatcact ataaaaatga gtttagcatt
    21301 tcaaaagatt atgtcaatat acgtggagaa gataatcttt tttcttatac taaaataaaa
    21361 aatatggttt taagactttg tggaaatgaa agtttaagag atgttttggg tgtggtttta
    21421 ggtacaaaca ttgcaaatat tgatctaagt attagttatg atgaacaaga tattagcatg
    21481 atagaagaaa ttgttcaaaa tataggagca aaagtattat ttttaaaaga aaatagagaa
    21541 aattttatca agagtattga agaatatgaa agagtgcgtt atttagcaaa gccaaatgta
    21601 aatgatgaga tttataaaga ggctgcaaag cttgctaaaa tcatcataag ggaaaagcca
    21661 ttattaaatg gtcgttttga gcttttaaat tatttcaatg aaaaagcttt aagcatatct
    21721 tttcatcgct atggaaattt aggcattaga gcaatatctt aattatcaag gagagattta
    21781 tggaagtggt tcaaattaat accccaatag cagtgacgtt tgtagcttat gccttgttaa
    21841 tgctttatat aggtttttat ttttataaac aaaataaaaa tacagaggat tattttttag
    21901 gtgggcgtac tatggggcct gtgatatctg cacttagtgc aggggcttct gatatgagcg
    21961 gttggctttt aatgggttta ccaggggctt tatatgtaag tggttttgtg gattcttata
    22021 tcgcgattgg acttactata ggggctagtt taaattggat ttttgtagca aaaagactta
    22081 gaatttatac tagtgttatt gcaaattctt tgactattcc tgattatttt gaaactcgtt
    22141 ttgatgatga taaacatata cttcgtatag tatgtgctgt ggtaattttg atatttttta
    22201 ccttttatgt ttcatcaggg cttgtaagtg gagcaaagct ttttgaaagt acttttggta
    22261 tcagatatga ttatgcgcta accactggaa ctattattat tgttgcttat acttttttag
    22321 gtggatacaa agcggtttgt tggacggata tgatacaagg gcttttaatg atgacagctt
    22381 taatcatcgt gccttcagtt atgctttatc atttaggtgg ctttagtgaa gcgatgaata
    22441 tagtagaaga aattaaacca caagctttat ctatggatgg ggtaggagct ataagcatta
    22501 tatcggcact tgcttggggt ttaggttatt ttggtcaacc gcatatttta gttcgtttta
    22561 tgtctattcg ttccactaag gatatttctg tagctacttt tataggtatt gcttggatga
    22621 tgatttgtct tttaagtgct tgcataatag gtgttttagg gatagcttat gtgtataaat
    22681 ttgaattaag tttgcaagat cctgaaaaga tttttatcgt gatgtcgcaa cttttattta
    22741 atccttggat agcaggtatt ttgcttagtg ctattttagc ggctattatg agtactgcaa
    22801 gttcacaatt gcttgtttca agctctacta tagcagaaga tttttataaa aagattttca
    22861 gagaagatgc gccaagtcat gttgtattaa atttaggtaa attaggtgtt ttacttgtag
    22921 ctgtaatagc gtttttgatt tctactgata aaaactcaag tgttttaagc atagtttctt
    22981 atgcatgggc aggatttgga gcgtcttttg gttctgtaat gcttttttct ttattttgga
    23041 gtagaatgac aagagtagga gcgattttag gtatgataac aggagctgct actgtggtac
    23101 tttggaagaa ttttgcaaat tcggatcttt atgaaatagt tccaggattt ttagcagctt
    23161 cagtggtgat aatcattgct agtttactta ctaatgtccg ttcaggaact aaagcagctt
    23221 atgaaaagat gttaaaggaa ctttgaaaac aaaagccttt tttaaggctt ttggattaaa
    23281 aatcttagcg taggtccact ttgatcgatt tcaagaactt taaagccacg attttttgca
    23341 tcttgtggta tggaattaat actttgtggg caatcacaaa gcacttctaa aatttcccca
    23401 cttttaagtt gaggcaagac atcaagtgtc gctatagcag gataaggaca agcctcacct
    23461 tgtaaattta aactataggt aattttcatt gtttatcctt taagctgaat ttttcaaaga
    23521 agtgtttttt gtaaaatact acaaaagcaa acattaagat aaataaaaca agattaataa
    23581 aaaatccatt taaatttcca aattcagcca aaagattaat tttcactcct tctttgaaag
    23641 cctttggtaa aaaatcataa ctcaaagcta aaatcatagt tcctactata tttgcaattc
    23701 ctactatcat gaaatgactt tgtccttcaa aagcacgata agcccaacca cactcacaac
    23761 ctccggcaaa aactatacca aaaccaaata aaaatgcccc cacagctaca gcaggagaaa
    23821 gttctatgag tttgctggta tgaccttgca aaataaaagc aaaagcgatt aaagaagcga
    23881 taatcatgcc gattaatgct ccttttatag cattatctct accaaataaa aataaatctc
    23941 taaagcaaga agtaaaacaa atttgccctc tagaaataat aaaaccaaaa ataaaaccaa
    24001 aaataagtgc caaagctaaa agactttgtt tgttttgcgc gctaatatta ccatttacaa
    24061 atacaagata aagcacccaa actaaaaagg ctatgaaaag cactatgcct aagttaaaat
    24121 ataattttgc actcaagttt tgcttattta acggtaagtt ttctttattt acgcgttcta
    24181 gtttggcttt gggtttaaaa aaggaagtat tgcaaatttt tacccctaaa taaattccta
    24241 agaccataaa aacagtaaaa agccaagtgt gtaaagaaaa ataaggcaag cctgtaaaaa
    24301 aattagccag attgcaccca aatgcaagtc ttgcaccata tcctgaaaga attccaccta
    24361 ttatagcttg aaaaattctt atattgctag caggtaggcg aaatttgact ttattggcta
    24421 aaagtgcagc tactaaacaa cctataaaca tgcctatgag cataatgcca tcagttcttg
    24481 ttaaaggagt tccatctaaa ttttgctttt ggtaataaga atatccatct aaatttatac
    24541 ctaaaagttc taaaaactca ccaccccaac gggtcatttc tcctgtaaca gcccaaacat
    24601 taccaaaaat tccaaaatac actgcactta aaattccaag cgcaatcata gagcgggaat
    24661 tatcccaaaa attgatgaaa tatttttgtt taaaagaatt caaagaaagt tcctaaaaat
    24721 gtaatcatca aaacttgatg ctaaaaaaga gtgagattat agcttaaatt taatatgaag
    24781 tcaaaaagat tgttgataaa tttattttgt ttttcattaa aaatcgctat aattatcact
    24841 ttggaagatt agtgtatctg gtgatcgcca ctgacttcaa atcagatgaa aggatagttg
    24901 actattcttt ggggagttcg attctctcat cttctcgcca atacaaagta aaatcaagga
    24961 aatttttatg agtaaagcag atatcattgt cggcattcaa tggggcgatg agggaaaagg
    25021 taaggtagtt gataaattat gtgaaaatta tgattttgtt tgcagaagtg caggcggaca
    25081 caatgcagga catacgattt gggtaaatgg tgtaagatat gcacttcatc ttatgccaag
    25141 cggagttttg catccaagat gtatcaatat tatcggtaat ggagttgtgg tttctcctga
    25201 agtattgatt gccgaaatgg ctcaatttga aaatttaaaa ggtagattat atatcagtga
    25261 tagagctcat ttaaatttaa aacatcattc tttaatagac attgcaaaag aaaaacttaa
    25321 aggtaaaaat gctataggaa caacaggtaa gggtatagga ccttcttatg cagataagat
    25381 taatcgcaca gggcatagag taggagagct tttagaacct gggaggcttt gtgaagtttt
    25441 gatgaaagat tttgaagcta ataaaacttt ttttgaaatg cttgaagttg aaattccaag
    25501 tgctgaagaa ttgcttgctg atttaaaacg ctttaatgga attttagctc cttatattac
    25561 agatactact agaatgcttt ggaaggcttt agatgaggat aaaagagtcc ttttagaagg
    25621 agcccaaggt tctatgcttg atattgatca tggaacttat ccttatgtta caagttcaag
    25681 tactatttca gcaggtgctc taacaggact gggtttaaat cccaaagaag tgggaaatat
    25741 tataggtatt gtaaaagctt atactacaag agtaggcaat ggggcttttc ctactgagga
    25801 caagggcgaa gagggaaaaa aaatcgcaca aattggaaaa gaaatgggtg taagcactgg
    25861 ccgtaaaaga cgctgtggtt ggtttgatgc gattgcggta agatatacag caaggcttaa
    25921 tggacttgat gttttatctt tgatgaaact tgatgtttta gatggttttg aaaagataaa
    25981 aatttgccgt gcttatgaat ataagggtat ggagattgac tatatgccaa gcgatttaga
    26041 aaatgttcgg cctatttatg aagaaatgga tggttgggat aaagtttttg gaataaaaga
    26101 ttatgattta ttaccagaaa atgctaaaaa atatattgca agaattgaag agcttgtagg
    26161 ggtcaaagta aagtatattt ctaccagccc tgaaagagat gatactatca ttttatgaaa
    26221 agtaaatata attctgttat aaaagtaaga aaacaacaac ttgataaggc agaatcaaat
    26281 ctcaatcagg ctaaacaaag acaaattgaa aatgaaaaag cttacgaact ttcacgccaa
    26341 gagtatgaaa atttaggtgt attgccaaga tcaggatcta tagcagaatt aagatcgaat
    26401 ttaagcatgg ctcaagtagg gcgtgaagct ttagcaaggg ttaaagaaaa ggtagagctt
    26461 tctaaaaagg aaataaatca ttatcaattt ttatatcaaa aagcacattt agattatgaa
    26521 aaaataaagg ttttagaggc tgaagaaatt aaacaaaaac aaaaagaatt ggctaaggct
    26581 gaagaaaaat ttttagatga aattgcgatc agtcgttttt tcaaaggaga aaaagatgat
    26641 taaaaaattt atatttttag tttttatttc aagtacagtt tttggagctg aacaagattg
    26701 tgagcagtat tttgaagcta gaaaagctca aattgaacta caaactagag aatttgatga
    26761 agcaagacaa tctttagaag cttataaagc ctcttttgaa gctttgcaaa aagaaagact
    26821 tgaaaatttg gaaaaaaaag aggctgaagt gaatgcaact ttagcaaaaa ttgaagaatt
    26881 aaaacttgaa aatgcaagac ttgtagaaga gcagcaaaaa attctaaatt caatcaatga
    26941 taaaactcaa ggtagggtta aagaaattta ttctcaaatg aaagatacgg ctattgcaga
    27001 tgttttaagt caaatggacg cagaggatgc aagcaagata atgctttctt tagaatcgcg
    27061 taaaatttca ggcgttttat ctaaaatgga tccaaaaaaa gctagtgaac ttactctgct
    27121 tttaaaaaat ttagataata atgctagcaa ctaagtaatt aaaaatgaaa atttttcatt
    27181 tttaacattc ttttaccaaa aataagctat tattttaaac attattaaat aaaaggtttt
    27241 taagatgcgt ataaaattgc cacatattcc ttatattgca aataaaatga tgttagatat
    27301 agctaattct tcttttgtag aaattaaaga tcaattagaa aagcttaagg tatgtataat
    27361 agaagtttta gagaaagata ttttaaatga aagaaaatta gacgaaaaag tgaaagagct
    27421 tttagaacaa caagaagatg aaatggaact tatgcaagtg gatcgtaaaa atatgttttg
    27481 gcttgtaaag aaaaaattag ctcctcagtt tagtgtaatt ttagattctg aagatcgtca
    27541 taatcatcta gcgcatcgaa ttttagaaga acttgtagaa aatgattata ttaattttat
    27601 agtgagcgaa aatagggtta aaaatttaat tttttcaagc atagaatctt atcttaaaat
    27661 ttatgaaaaa cttgaagatg aggtttatga aaaaattagc aattataaaa caaaacctat
    27721 tccaggcagt gaagaatatg agcttatttt tgaaaagctt tatcaagaag agcttagaaa
    27781 aaaaggtatg ttttaatgaa agcttatatt tatctagaga atgatatttt tttaattgct
    27841 aaggcttttg gaaaaggtgg tacttttttt ggagagcttg tatttaacac ctctttaaca
    27901 ggttatcaag aaatcatttc agatccttct tatgcaggcc aatttatcgt attttctatg
    27961 ccagaaattg gtgtagtagg aaccaatgaa aacgataatg aaagcaaaga aatctttgca
    28021 agcggtgttt taatgcgtga attaagtcct agtttttcaa attttcgtgc caaagaaagt
    28081 ttgcaggatt atcttgaaag acatggaaaa ataggaattt atgaacttga tacgagatat
    28141 ctagtaaaaa tgataagaaa taacggcaat ttaagagctg tgatttcaac cgaaatttca
    28201 aataaagaag acttaaaaat tgccttagaa aaatcagcaa aaattgatga aataaatttt
    28261 gtaaaagaag tcagcactaa gaaaaattat tctcataaac aaggcgtttg gaattcaaat
    28321 ttgcaaaaat ttaatgacgc taaaagaagc gagaaaaaag ttgctgttat tgattatggt
    28381 gttaaaacaa atattttaaa tgagcttgta gaagtaggct ttgaagtgga agtttatcca
    28441 tataatgtta aagcagatga attgattact ttgtataaaa aaggtgaaat tcaaggcgtg
    28501 tttctttcta atggcccagg cgagccaaga attttaaaac aagagattgt agagattaaa
    28561 aaacttatag aagctaaaat tcctatgctt ggaatttgtt taggtcatca gcttttaagc
    28621 aatgcttttg gatatgaaac ttataaaatg aaatttgggc aacacggagc aaatcaccct
    28681 gtgattaatc ttgatacaaa aacagtagaa attactgcgc aaaatcataa ttataatgtt
    28741 ccagaagaat tagctcaagt ggctattatt acccatagaa atttatttgg ggataatgtt
    28801 gaaggagtaa gatataaaaa ttatcctatt atatcagttc agcaccatcc agaaagttct
    28861 tcaggtcctc atgagagtaa gtatattttc aaagaattta tgaatttgat gtgaatatag
    28921 attttttagc cattattggc gttgcttttt tatctagttt tggacactgt tactctatgt
    28981 gcggtggttt tactttactt tttataaatt taaattcaaa aagtaataat ttatttttat
    29041 taactttaat ttatcattta tttagaattt ttgcttatat tgttttaggt ataatttttg
    29101 ggacttttgg aaatatatta gcaattaatg ccaagattca aggtttgtcg ttttttgttc
    29161 ttggcgtatt tatgatgatt ttaggctttg ctcttatttt tagaggtaat atgttatctt
    29221 ttattgaaaa taatgttttt tttgatggtt ttataaagaa aattattaaa aaatctaaaa
    29281 attttaaagg attaaaatca gctatatttt taggattttc aaatggtttt gttccttgtg
    29341 gattggtgta tttttttata gccaatgcaa tgagtaaaca aaatgttttt gaaagtattt
    29401 tggtaatgat gatttttgga gtatcaactt tacctgcaat gttatttttc tcaaaaattt
    29461 cacagttttt cagcgatttt ttgagaaatt tgtttaatta tttatcgtat ggcattatta
    29521 tttgttacgg tataaatctt gcctatatag gttttaaggc ttttcaatga aaaatttttt
    29581 aaagcaattg aaaaatacaa ttttttcaag aatggatgct taaggaaatt tattttttgt
    29641 cagcgataag ctttgctaaa taatgtgaat atagtaaaaa gagctataag aaaaaagcat
    29701 tcaaaattta acatctagat gttaaaagtg ttatcaagag ttaaaaactt tcatataaaa
    29761 agccttgtta acaagttatt ttaaaatata gataaatcag gcaagacttt ctatcttgaa
    29821 accttattaa tttctatttt gaataaaata ataaatttat agatatagta gcattttctc
    29881 atgatgttag taattctttt taagtttaat gaaaagctta ttctaaatta cgctaaatta
    29941 agagaattaa gcataaatct caaaaatata gttaaaaatc accaaaagaa tttatacagt
    30001 tagataaaaa tttgagaaaa aaatgcgaat tgtcttggaa aaaaatcaaa aagatattaa
    30061 aataatctat gaagagattt tgaaatcttc atttaaatga gtttggtatt actatgtttt
    30121 aaatgaaaca aaatcttaaa gatgaaaaaa ggatttatcg agatttattt acaatcaaaa
    30181 gatataagaa tatgtcagaa acattgatat gtttagaact ttgtttgata agggagtata
    30241 gaaactgttg tatttataaa aaagacttaa ataaagcctt agaaattgct tttgaaacta
    30301 tagaaaaaaa tcatgtaaat attgaatatt gtttcaaaaa gttgattata aagttttggc
    30361 atatgataat ggcttgataa gagtttttct caatttgatt ttaagtcata cagaaacatt
    30421 taaaaataaa aaagaaagat tgtaacaata acttttttaa aatttgaaaa aaatatctga
    30481 aaattaaaat aaaagataat gttggtgaga ttgataaaga aaacttagat aaaatttttc
    30541 aaccttacaa taaatatcct atcaaagtat agaagggctt tataagtaga taaattatcg
    30601 aaagtttcta aggaaaaata aaagttaaaa atgaaagatg gggcttgttt tgaagtattt
    30661 ttaaagctaa aagagagggt agagtagaaa tgtcacaaga atgtaaaaaa ttaataatat
    30721 tagtagttga agatgaaatt aaaactagag aatcattaat taaagtatta agtgaacgtt
    30781 ttagcaagat aattggagct cgaaatgggg tcgaagggct caaaaaattt aaaaaattta
    30841 aaccggattt agttatcaca gatatcgcta tgcctattat ggatggattg gatatggcaa
    30901 gagagattaa agaaatttca gatgatgtgc caattgtcgt tcttagtgca tattcagaaa
    30961 aagagagact tttgtgttct attgatattg gtatagataa atatttaatt aaacctattg
    31021 atatagaaga attatttaaa gttttaaatt gtttagttgg tgaaaaaatc gaagcaaata
    31081 tgcttgtaaa aatttctgaa gaatatcaat ttaataaaac taaacgaact ttgattcata
    31141 atggtaaaga agttgtttta actaaaaaag aattagcttt tatttcttta cttttaaaac
    31201 aacccggagt tttggttttg catgaagata ttaagaaaaa tgtttggata ggtgaacatg
    31261 tgagcgatac tgctgttaga acttttatca aaagagtaag agataaagtg ggtgaagatt
    31321 ttataaaaaa tgtgccaagt ttaggttata agataaatat caataaataa actgatttaa
    31381 ctttaaaata taacaaatag ttaacaaaat tattattttt aagaaaaaat gtataattaa
    31441 tattgtacaa tattttcttg ttatcaaaaa aattttaagg agaaagtcga tgcatccagg
    31501 taatgtatta aattacgact atacggttac aagatatttt atgtttgcaa ccatattgtt
    31561 tggcattgtt ggtatggcta taggaactct catagctttt caaatggcat atcctaactt
    31621 aaattattta gcaggagaat atgccacttt ttcaagactt agaccacttc atacttcagg
    31681 tgtggttttt ggttttctga tttcagggat ttgggcaact tggtattata taggtcaacg
    31741 tgttcttaaa gtgagcatgg ctgaatcaag atttttaatg actgttggca agcttcattt
    31801 ttggctttat atgtttacta tgattttagc tgttatatct ttgtttatgg gtgtaactac
    31861 atctaaagaa tatgcagagc ttgaatggcc tttagatatc cttattgttc ttgtttgggt
    31921 tttatggggc gtaagtattt ttggacttat tggaattcgc cgtgaaaaaa ctctttatat
    31981 ttctctatgg tattatatag ctacattttt aggcgtagct atgctttatc ttttcaataa
    32041 tatggaagta ccaacttatt ttgttacagg aatgggtaaa tggtggcata gtgtatcaat
    32101 gtatgcagga acaaacgatg ctttagtaca atggtggtat ggacataatg ctgtggcatt
    32161 tatatttact gtgggtgtca ttgctcaaat ttattatttt ttaccaaaag aaagtggtca
    32221 gccgattttc tcttataaac tctctttatt tgcattttgg ggtataatgt ttgtttatct
    32281 ttgggcaggt ggacaccatt tgatttattc aactgtacct gattggatgc aaactatggg
    32341 ttcggttttc tctgtagtat tgattttacc ttcttggggt tcagcgatta atatcttgct
    32401 tacaatgaaa ggtgagtgga gtcaacttcg cgagagtcca ttgattaaat ttatgatttt
    32461 ggcatcaact ttttatatgt tctcaacact tgaaggacca attctttcga ttaaatctgt
    32521 taatgcttta gcacacttta cagattggat tccaggacat gtccatgatg gaacacttgg
    32581 ttgggtagga tttatgacta tggctgcact ttatcatatg actcctagag ttttcaaaag
    32641 agagctttat agtaaatctt taatggaagc tcaattttgg attcaaacta caggtatagt
    32701 tctttatttt tcttcaatgt ggattgcagg cattactcaa ggtatgatgt ggagagcaac
    32761 agatgagtat ggtaacttgc tttatagctt tattgatact gttgtggcta ttattcctta
    32821 ttattggatt agagcgattg gtggattatt gtatcttatc ggtttcttta tgtttactta
    32881 taatatttac aaaacaattg cttgtggaag agtgcttgat aaagaaccaa aaagcgcttc
    32941 gcctatggca gcataaaaag gagaaaatat gtttagttgg ttagaaaaaa atccattctt
    33001 ttttgctgta gctgtttttg tggtgattgc ttatgcgggt atagttgaaa ttttaccgaa
    33061 ttttgcagaa aatgcaagac caattgaagg caaaaaacct tatacggttt tacagcttgc
    33121 agggcgtgcg gcatacatta aagatagttg taatgcttgt cattcacaac ttattcgtcc
    33181 atttaaatca gaaacagatc gttatggtat gtattctata agtggtgaat ttgcttatga
    33241 tagacctttt ctttggggtt caaaaagaac agggcctgat cttgctcgtg taggaaatta
    33301 tagaacagct gattggcatg aaaatcatat gtgggatcct atttctgttg ttccagattc
    33361 tattatgcct tcatataagc atatgtttaa aaataatgca gatattgaaa ccgcttacgc
    33421 tgaggcttta actgtgaaaa aagttttcaa tgttccttat gatacagaaa atggaacaaa
    33481 acttggttct tgggaagatg cacaagccga agttagagca gaagctcagg ctatagttga
    33541 tcaaatgaaa aatcaagaag taaaggatgc ctttgctaaa ggtgaaatca aagaaatagt
    33601 tgctttgatc gcttatttaa atagtttaaa gtaagatgat ggaacattta tcaatagttt
    33661 ttaatgtgat taaaaattta atcacacttg atttagcagc agttcaaaga catgagtggg
    33721 agattttcca aggttatggt ttttttgcac ttgtgatgtt tttgtcgata gtattgtata
    33781 catattggta tcatttatat aaaacagaaa aaaaaggtga gaggaattat gaaaattatg
    33841 caaatcttgc cttgaaagat gatattgatg atagtgtatt agaaagtaaa aggagtgctt
    33901 aatgcaatgg ttaaatttag aagataatgt taatctcttg tctttaattg gagctattct
    33961 tatcatttta atcacactag ttattgtgag tagaatgttt aagcaaatga aagaaaaaaa
    34021 aggtgagtca gagcttagtg agcatagttg ggatggaata ggagagtata aaaatgccgt
    34081 tcctaccggt tgggctgtgg tgttttttct gactattgtt tgggctattt ggtatttttt
    34141 atggggatat cctttaaatt ctttttcaag tataggtcaa tacaatgaag aagtaacaac
    34201 tcataatgca aaatttgaag aaaaatttaa aaatttatct cctgaagata aaatagcaat
    34261 gggacaaaat atctttttag ttcagtgttc agcttgtcat ggaattacag gggatggtat
    34321 taatggtaaa gctcaaaatt taagtatttg gggtagtgaa gaaggtataa tcgatgcgat
    34381 taaacatggt tcaaaaggta tgaatttccc aggtggagaa atgcttgggg cagctgattt
    34441 aggtatagca gaggaggata ttcctgctat tgctgcttat gtggcaaaag atctttcagc
    34501 tattaaaaaa acagctaatg agaatttagt agcaaagggc aaagaagctt atgcaacttg
    34561 tgcagcatgc catggagaag atggaaaagg ccaagatgga atattcccag atcttacaaa
    34621 atacggttct gcagcttttg tagtagatgt tttacatagt ggtaaggcag gttttatagg
    34681 aataatgcca agttttccag cacttaatga tattcaaaaa gaagctgttg gcgaatatgt
    34741 aatttctctt tcaaggggtg aataatggaa aataataaca gatgtatatt ttctctttca
    34801 ggtgttacag gtatgttaat tgctacggtt ttattgcttg tgatcttggt aattttaact
    34861 atttggggtc ttaaagctca gcaagaagtc atgcaaaagc catacaatct taaagatata
    34921 caaagtgtaa agatgtttgg ttcaaaagag caagatcata gaagtataaa ggaagcacaa
    34981 tgaacaaggc tttagaatat ttaattgtta ttggtttagt tgttgctgct gtaatcactg
    35041 cttggtcagt tttgactgta aatcatcttc atataggatg aaaaaaatat tacaagatgg
    35101 ctttttagcc atcttcttct ttattttatt accttctaaa atttttgctc ttgatgctgt
    35161 gctttttaat gaaaatattt taagtcagaa agtaagcaac gagattaatc ttataggaaa
    35221 agagctttat caaaaaagca atatttttgt cggcgttatg gttggtgata aaaccgaaat
    35281 tgaaacttta ttaaatatgc aaaaagaact tcctcaatct tatatattgc ttcttttgtc
    35341 taaaaattct cataaagttg atatagtagg ttcaaaaggt gccttagctt tgattgataa
    35401 agaagctgtg cttagtcctt attctggtac aggatctatt ttgccgatat tagctacaag
    35461 taaaggtgat atttataatg ctgctatact caatggttat gctgatatag tagatcgtgt
    35521 ggcaaagtct ttgggattac aattacaaca ttctataggt aatgcaaatc gtgatactat
    35581 aaatatttta agaatactta tctatggatt tatttgcttt gcattgttat actatacgca
    35641 aagaagaata aaaaggaaaa aaaatgatag aaactaaaaa aagtttttgg ccctatggta
    35701 ttttgctttc acttttggct ataattattg cttgtattgt aacgattttt atagcaagtt
    35761 actatcctgt atacgaggat gatttttatt tcgactctta tcagaatgtt gaaaataatt
    35821 ataataaaat acaaaaac
//
LOCUS       DAPWAA010000007        33976 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.007, whole genome shotgun sequence.
ACCESSION   DAPWAA010000007 DAPWAA010000000
VERSION     DAPWAA010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 33976)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33976)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33976
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.007"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..449)
                     /locus_tag="RTF91_000326"
     CDS             complement(<1..449)
                     /locus_tag="RTF91_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002888079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDZ4943254.1"
                     /translation="MNNADNFLKTSTLIKPTQTKLKAPFAWVGGKNYLAKEIIALMLE
                     HKSYIEVFCGALSVFYQKSPSKIEVINDINDELINLHLCIRNKPQSLANVLYSMLVSR
                     KIFYMLKNKQIKPKNEIERAAFYFYLINTSFGSSMGQFAMSKQRAPK"
     gene            complement(625..1113)
                     /locus_tag="RTF91_000327"
     CDS             complement(625..1113)
                     /locus_tag="RTF91_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDZ4943255.1"
                     /translation="MSEYIEVKGLKNFFKACDKLISMDKHGESIMAGAGESIRNSILD
                     SFKNERSVFDGKWKSLKPATIKQKIKEGKNKGILKRDGELSKALNWQSKVTKNSVEVF
                     NNIQSKSGFKYGFVHQYGSKKKNIPARPFLPIDNTNVLHQSIRSMIYKDTKDFIARIV
                     KK"
     gene            complement(1118..3334)
                     /locus_tag="RTF91_000328"
     CDS             complement(1118..3334)
                     /locus_tag="RTF91_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDZ4943256.1"
                     /translation="MENAGSIGIGVILGLAIKNTSAVGKMIKDFSNLEKIAAKTKLGI
                     SGLQKELNTLKLNANLRAELKAQRKGLQDEFLSLGNVIRGGIIGKGLGEAIGFESAMA
                     DVRKVVNFDEGDNIKKMGDDILKMSQTLPVSAKELAAIATAGGQIGLGSKDVREFTNL
                     VTKMKVAFDMSAEDVGDSVAKIKNILGISLKEMQDLGDSINNLSDNSASKAREIIDVM
                     KRTAAAGKQIGFTKEQIAALSSSFISLGKGPEVAGTAINSLYRVLATADNIGAKAENA
                     FSKLGISGAFLKQASFNDPQKGLDMFLERIAKLDQKEQMGILVDIFGREFADDMATLV
                     GGLDTYKEALKNASDEAKEGSLQREFDTRAATTENSITLMKNAFNALAVNLGSVFLPA
                     ISKLSAAISYLVNGITHITGLIPGLNGVIGGLIATFLLAKPAVLAYAIAKNYLKDCTI
                     LLKGALIKTRIHLLAFRNSCILSNIILKAKTITTNIYTASLKVLSFVLGGLGKVFKAV
                     AVGIRVLSVAMMTNPISLILGGIAIVAGLVIANWDKVKSWFMSFIKWLRPVWEPIYNV
                     IKAVFDKCALVFTSFKDIIMSVASPLAEFLNSIWQGIGDFFYSIFGSLFEWFASKLSW
                     VGDMISSISGFIKDALDFVGFGDDEEVKISQSEQNKEKIIATNTYKDELAGAKNISHT
                     PSFNNGNINVSVNGTFNIATKDGNFNMQEFANAIQKSVFDALRKQEQNKINTTIYG"
     gene            3376..3681
                     /locus_tag="RTF91_000329"
     CDS             3376..3681
                     /locus_tag="RTF91_000329"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943257.1"
                     /translation="MKVLKFINDDAISHIALLLTTLIPAFLISYQSASDGFFNTIAIF
                     IFSYFISIVITAILMMIMPPIALLLILPTWLIVISLDFILLTILKIYSFKNKTIKNS"
     gene            complement(3793..4032)
                     /locus_tag="RTF91_000330"
     CDS             complement(3793..4032)
                     /locus_tag="RTF91_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDZ4943258.1"
                     /translation="MKEKIIKLENGEELKMREPNVRVLKNATNKSEKEMEQTIYMIAT
                     LTNKQESEIEDLNLKDFRALQDALKDFLVEAGVIA"
     gene            complement(4136..4645)
                     /locus_tag="RTF91_000331"
     CDS             complement(4136..4645)
                     /locus_tag="RTF91_000331"
                     /inference="COORDINATES: protein motif:HMM:NF016846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDZ4943259.1"
                     /translation="MKRIIGEVIQEGNIYIDGQGYLGVVRNLKLPDIEQEMIETKGVL
                     GANYSSGVLKPLEISFKLAVVDPVLYAAFFHTTFSEIKAPLLLRESVHKGGKNYGISA
                     EFLGEFISISESDHESGKEVEAEIKIAVHFYMQRRNNIPIIIYDHKNTILMINGVDMM
                     SDVRSNLTL"
     gene            complement(4670..5863)
                     /locus_tag="RTF91_000332"
     CDS             complement(4670..5863)
                     /locus_tag="RTF91_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath family protein"
                     /protein_id="HDZ4943260.1"
                     /translation="MAANYGVNFNISNGAASPIKVQSDTPIGIVAAIKGASKEMIYTK
                     AGYESVEAMPIFAFSNVGKAKEFVSDLIKEHNLQDYRLLDSLECINLQNVSNAIIISF
                     FEESEESENTLTSIVNAIEAFKKAKHKTGFSPDLIIAPYYSHEAGVKAKLESVASSMN
                     ITAITDLCASNVGEAINTMEAFSSKRLIAAWPRVQILNTRGSYAYVPQSPIVAAMIAH
                     TDGDKEYGFSDSYSNRVMNGVTGTEHFIEFINGSDCDAERLRNAHISTCILAEGYRSW
                     GGETSHEDTIWQDLARVRTFDRIAIAGQKAAFKAIDKKASELYFIKISIEELLRDLKG
                     AKVLIGYEVSWDEERNTDANVSAGKFYLNVKMMNNPIVKQITLEFIYSDEWASDLIKT
                     ISADS"
     gene            complement(5867..6823)
                     /locus_tag="RTF91_000333"
     CDS             complement(5867..6823)
                     /locus_tag="RTF91_000333"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943261.1"
                     /translation="MKDYGISYTPDNNQGLVEPNDPITSEKMDEKRVNELIDKKLEGV
                     KGIKGDKGEDANSNLKELQIIDGKKLRVEFSAKQTSSAYPLKTLTLSRLGIKLTGDDE
                     FLKINSLEFIDDSNNNLLLTTAENETLNKASNEHASTLPADFSLESFQAEGSYAKVKI
                     TSNGAYEFGNRYAPYYAFREYDETAISVFLANDGLKDPFYTIECELSKPIKEFKFTPW
                     GYGAGGNFFSENLNVKIYIDDVLFKEFNSLNPNSKEIDTDFTINFNVQGDKLIYDEFK
                     DEIDERFRIVENKLKDLGATFTKASALSELNVAAKNKTKKRS"
     gene            complement(6820..7206)
                     /locus_tag="RTF91_000334"
     CDS             complement(6820..7206)
                     /locus_tag="RTF91_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1353 domain-containing protein"
                     /protein_id="HDZ4943262.1"
                     /translation="MTKTELKRVCVKPFDKDRFEVISDYAFSLPNCKGIVPKGFKTDG
                     ASIPRLFWSLFPPFKSEYFSACVVHDFLCEKAKSRVDYKIADLVLKEAMTLLGCSKFK
                     IFVFYHSCNIYHALKCAFKSIKKELK"
     gene            complement(7199..8959)
                     /locus_tag="RTF91_000335"
     CDS             complement(7199..8959)
                     /locus_tag="RTF91_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDZ4943263.1"
                     /translation="MKALSLTFVPNTYCNFGCTYCYLGKLTNKHSKTSNMAEQFNKIV
                     AKLKSENVIVTEVFLHGSELTASPYEDVKKLLEAISAYEQENKDYIKLLNKHKTIRYY
                     THLKTNLYNLDKFYDLFVKHKVGISGSVDLPLRLHQKNRVLKNGKSTLEKTLEMIKLL
                     VKYPHFKQFSATMTSECLNVDEFLEDIFKIESLGYDMANDFYIMFAYQSSNAQGIFKM
                     AEDKAMLNFYNELRKRLKNTKYAFALEHIWFREFLGDYCVSCVNCADGQRMLIQKNGD
                     TYICHRSQALKELKAGNIFHQSYESLKANNIINISLMENNLELHKDCLECEYFHYCKA
                     SCTIERNDTKLGKAYTCALQKAIYKNNPSFYKPNKLLANKYLDTFLIQNQMNKHKDKR
                     LPKATFELKQREKSLENIIARDKLLQKLYDKSNFFISINNNIKELDLDKDDIHCLHHL
                     SSKDEIKLLIKKDAFYINSKEVIDNFVWMALIGGEIQTYGEEQRTKIPHINTEYLYWN
                     KLIDEAKVLEGYFVYDISYFLKANQKSFKKDYKNFIFFTTRAMREYHYEKQAKNAFYH
                     IQAINLPFLRLEFIWENEND"
     gene            complement(8961..9593)
                     /locus_tag="RTF91_000336"
     CDS             complement(8961..9593)
                     /locus_tag="RTF91_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943264.1"
                     /translation="MFYILNENDKKYLNDTLEKVNKKIQDLQDKNEQENLNKAKHLNE
                     CKNSLEACLNKSDDKYDFFIYEIYTFVWGEKQAILLPEDELKQTNSKIDKTQINIPTL
                     KELAQSVIKEEVENRINNSLKMQERLQEFNENGIPRKITIRQAKLALLEAGLLDDIET
                     MMQSAPKAIQINWEYATEFERENELILFFQQQAKLSDEFVNELFKKAKGF"
     gene            complement(9904..10395)
                     /locus_tag="RTF91_000337"
                     /pseudo
     CDS             complement(9904..10395)
                     /locus_tag="RTF91_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108982.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            complement(10395..11015)
                     /locus_tag="RTF91_000338"
     CDS             complement(10395..11015)
                     /locus_tag="RTF91_000338"
                     /inference="COORDINATES: protein motif:HMM:NF021220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HDZ4943265.1"
                     /translation="MNTLILNHHPKQSKAIDLSAKARFEELNLASITNLAQHCDERLL
                     PVLANAYDVSIDGLNEKEARKLISKALLLDRYNGTAWAIKEALCAVFPTAVVKEWFEY
                     SGKPYFFKVKVSTTNVSFDERTLNTLERLIKDFKNVRSVLEAIEIEIESKNDSFNASV
                     EISGEAIEILPFQTTFLENEIKSTKNANAIFMCEISKTNIDFKGVY"
     gene            complement(11012..12178)
                     /locus_tag="RTF91_000339"
     CDS             complement(11012..12178)
                     /locus_tag="RTF91_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009650649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDZ4943266.1"
                     /translation="MSELLSANDSYFKQSFLKHIPYPKIIEELDFEKILKDLEELFKS
                     FLNENVELLESDPFKAILEALTYREMIIRARINESIKATYLHYASGSDLDNVVANGYL
                     IERLKGVKPSAKVEFELNAILTYDVIIPKGAIFSNEKADIATLKEEVIIKKGQNKAGG
                     VLELDEFIQSKESKTEFLQTPLPFVAKIKQLEYFSGGASEESDESLRERAVMSVHRFS
                     TAGSEKGYIYHALSASAKVASIKALNNGAGKVRVIIKSEDELSVDVVKEYLNADERRP
                     LTDEVSVELAKKREFIVDAKLLLLELSRANEISEKINALQKDFDLSVDLALGFIYKCL
                     HQDGVYKSEILSIKEKIINEEKQELKDLPLENILINDDEFATLSFLLSYEKAVL"
     gene            complement(12175..12465)
                     /locus_tag="RTF91_000340"
     CDS             complement(12175..12465)
                     /locus_tag="RTF91_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDZ4943267.1"
                     /translation="MNYMVNIEESIKDILITPLGSRVMRPEYGSLLYTLIDRKIDDDF
                     KIKLTRYTAEAISKWEKRVKLKGVRLNECKDNKLSITLLFENHQDLTMEFGK"
     gene            complement(12462..12674)
                     /locus_tag="RTF91_000341"
     CDS             complement(12462..12674)
                     /locus_tag="RTF91_000341"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943268.1"
                     /translation="MAISQDSLISKMEKHLQSQGYTKVEDEDNGRGYRRYSMPFLRAL
                     AGAVVEEIKENAKAIDTADGGKWSIE"
     gene            complement(12827..13171)
                     /locus_tag="RTF91_000342"
                     /pseudo
     CDS             complement(12827..13171)
                     /locus_tag="RTF91_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108984.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
     gene            complement(13171..13485)
                     /locus_tag="RTF91_000343"
     CDS             complement(13171..13485)
                     /locus_tag="RTF91_000343"
                     /inference="COORDINATES: protein motif:HMM:NF027409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943269.1"
                     /translation="MKLEDIFVYMVLMIVSFIAGLVGIVTKNKLSKALNLKGKFALFL
                     KGMLGSMFVAYLVFEIVNYLNFGIKLSVAVGGFAAYMGTDALLKIEQLVEKLINKKME
                     KL"
     gene            complement(13597..13842)
                     /locus_tag="RTF91_000344"
     CDS             complement(13597..13842)
                     /locus_tag="RTF91_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943270.1"
                     /translation="MNDKMRIFLLIIPFVFTACASKDVLIKTEFKELKVPIKCPLKLP
                     LKPFDYGNLESAKEISKYYLEVENIAKLCTGEKDERK"
     gene            complement(13839..14180)
                     /locus_tag="RTF91_000345"
     CDS             complement(13839..14180)
                     /locus_tag="RTF91_000345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943271.1"
                     /translation="MFSFILSRFLSPSKIAFFALAILCGFLHFKNNVLSLENENLKLK
                     ALHFNNEINIFKDKLAKQNEAIDKLKLDLKPKETLKEVLKVDKVFIKDKSCQSELKAY
                     KELFNILGAKK"
     gene            complement(14271..14660)
                     /locus_tag="RTF91_000346"
     CDS             complement(14271..14660)
                     /locus_tag="RTF91_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HDZ4943272.1"
                     /translation="MKNNPYFKEGEFKCKCGKCELPQNVPSNELIDILCEIREHYNAP
                     IIINSGYRCASHNAEIGGAAKSQHTLGSAADFVVKGVKTEDVHQYVLQRYGERGLGIA
                     IKHNFNDPYAGFVHLDTRGKKARWTYP"
     gene            14811..15245
                     /locus_tag="RTF91_000347"
     CDS             14811..15245
                     /locus_tag="RTF91_000347"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943273.1"
                     /translation="MLKDFENELLELLKDFKAKMYLGEFEDTQNIARCINNLDASLLL
                     DFEGESYKDLENKVGTWKLYILTHTKSKAPERRIDAKHKLFDTIESVDKVLLNAELSN
                     GFRIEIKDLKKVYEGISDHGYLSIYARTLQSGFLPKDDFLRI"
     gene            15247..16062
                     /locus_tag="RTF91_000348"
     CDS             15247..16062
                     /locus_tag="RTF91_000348"
                     /inference="COORDINATES: protein motif:HMM:NF021627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943274.1"
                     /translation="MLFINKENLVEISNDKPIKVAIKGEWKGHNNGRFKVDDKDLNSM
                     IENFNQKKIDLVIDYEHQTLKNDKAPAAGWIKELYLENDALMAKAEFNEEAKNYIANK
                     QYRYLSPVFEFNAKDNKSGELVRAKLHSVALTNTPFIDELGELIANKNNIHQNKGEKM
                     DEKIKELESQIVALKNENSSLASQNEALKKQNEESAKNLASSLVDNALNTGKIANSQK
                     EWALAYACKDLEGFKSFLDIKDTQVQVPKNNLFANKNTAKTNEFDVVKMMLGD"
     gene            16065..16577
                     /locus_tag="RTF91_000349"
     CDS             16065..16577
                     /locus_tag="RTF91_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943275.1"
                     /translation="MAKAKKETENLENKDLAKTLSLEDENIANEEAESENEDDKEPTN
                     EKGEEMPPKVMPKSLSNDPLIAMPKSLESFINKDLLSINAKVNLEVNESLALGTLLIS
                     EDFGESFKKCPDEDISSKENIKLGMLKDHALNTGVYAVLIVGEINLKGVHASAVKKSF
                     MQNLIINIKE"
     gene            16580..17557
                     /locus_tag="RTF91_000350"
     CDS             16580..17557
                     /locus_tag="RTF91_000350"
                     /inference="COORDINATES: protein motif:HMM:NF015802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HDZ4943276.1"
                     /translation="MELEQLLELFSSTKVTEVINQTKASPRFVSDTFFKEKIPSLEST
                     ARVEIIKGAGIVLNSISENGEHSLEETRDAYILNIPLPRFALAKRISAGEINSLRSLA
                     LQEAQAKSLSGAIGVLVKEMKESFNTTLEYMANGALFGKILDGKGNVLFDFGSTSKNV
                     VKVKKDASTTLASVCDAIDTAIIDEFGVSADYEVLCGNELFAAISNLALSEDLYKNHL
                     ASRDEKDKSLILYGTKYRRYSAKYKNTSGKSVEFLKSSEGMVVPKDNSNRIYYTRANH
                     TEALGKAPSLMFVSKPEILPRGAGIEIVGEMRAMPVCTRPNGLIKLVLE"
     gene            17672..18130
                     /locus_tag="RTF91_000351"
     CDS             17672..18130
                     /locus_tag="RTF91_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 family protein"
                     /protein_id="HDZ4943277.1"
                     /translation="MNYQDTLEEELITEAKTHLFMIDEKDLIKELSVHAIAELSDLNA
                     DGVCDKEVIDDAINDAQSYIASFIKIPKNPTSLLKDICVKLTIMELKRRNDFPKEGLE
                     DIREWANDLLLKMANKKIPTEIDEDDFFPQNKVRAFKIKRKRMDLRRING"
     gene            18123..18605
                     /locus_tag="RTF91_000352"
     CDS             18123..18605
                     /locus_tag="RTF91_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HDZ4943278.1"
                     /translation="MANNESKELAKELYITGFDIFKIAKILNRNEKTIRNYKAKDGDW
                     DKQKANLLTSKIKDKESASLYESFTEQMFCAIENINADEKMNAEKKTEAIARIGDSFS
                     KMRKVARLEDPSSYRLNVAKKVVEIIISHLKNDKDCVTKLVSLLESGVIEKEILAMDI
                     "
     gene            18605..20275
                     /gene="terL"
                     /locus_tag="RTF91_000353"
     CDS             18605..20275
                     /gene="terL"
                     /locus_tag="RTF91_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HDZ4943279.1"
                     /translation="MLFSKEELDEFLILNEQKHENTPNDLKSAMQRKDFLEWMEELKN
                     ELKTQFLHESHLNPALKEERIKRASVDFDYFAKTYFPHYFTIKGECALHLHLNEVFKK
                     IALKKEGKGEKHAIAAPRAHGKSTYTSQLFPLWCLVFNYKSFIVEISDAVELMEGMLE
                     AIKAELEDNPHLKLDFPEVVGIGKTWRVGEFVSNNGVKIKAFGSGKRLRGVRYGVKRP
                     DLVILDDLENDTNVRSKDQRDKLEDWVDEAVLNLGSADGSLDVLYIGTILHNDSVLAR
                     KLKFGFWNPKVFRSIEEFPQRLDLWDEYATLYRNVDFNTAHQFYLKNKALMDKGAKVL
                     WNKAKSLEDLMKLRAENLKAFNKEQLNNPRSENQIFSQEIINFYDVLPSINQYYMYID
                     PAGEKAKSDFTAITIIGKGAKGFYVVESIVKILKAQSIIKTIFNLQKIYKCRLIEVET
                     NGGQFFLKKWLQEKSLECGVFLPLRGKNNSVSKFERIEGLSIAFENEELFLHKSQTML
                     INQLLDFPEGKNDDAPDSLAGAFLLARTKSSIKRRKHNFSSVPRVRRF"
     gene            20285..21664
                     /locus_tag="RTF91_000354"
     CDS             20285..21664
                     /locus_tag="RTF91_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 family protein"
                     /protein_id="HDZ4943280.1"
                     /translation="MKKEIKSKREVILKNNSLINTLINSSYLNVLKISENDQRMIFKD
                     LSFTQAHQSRRSVILAKELQIVCENEKIKESFEYLFYPDLIGQILETYLYGLNVFEVN
                     YKLKDGFYYPILKQRDFRNFGFNKEDELIYNGNGCEEIIEDKKAIYGLFGSNFLFKNG
                     DALLTKLYFPIKLKNASLKFWMEFLEKFGSPWAVAKTDSDPDALASEIHQMLNGDSAV
                     IDKEEELDLIQPKTKANYNEIIDYLDNQIRSVVLGANLTSQVSSGSLAAAQSHNQIRK
                     DLAQQDGQIVLFILNRAIKFFKEINNFKDELFVQFFSEAEPKSELCERDLKLFNMGFY
                     FDEEYIKSTYNVEGKLIKEPLTQESKTLKENKEYKKTLFENKVKLESFEEDFIDKALE
                     QKEYLKVDESMSKFFKEQFESIVKDCKDFDEALNKLKENFSSLEQSEFEKHLFIALSN
                     SSVLGYLED"
     gene            21666..22904
                     /locus_tag="RTF91_000355"
     CDS             21666..22904
                     /locus_tag="RTF91_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002909482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943281.1"
                     /translation="MSSVKIGFFSEPTKAIEYLKIKKPQASFDCDELSHSTHKKVFTI
                     AKLMDESLLKDMQDTLVDAIKNGDKFSTWSKIAEEKLKAKGWWGSKEVINSKTGEVKK
                     THFNSARLKKIFEENSRKAKAKAIYENQMKSTKPYFKYCTQKDSLVRDKHRAFDGIVL
                     PKDDPFWDTHYPDVTMHDYGCRCYVLAVGESEVKDLKTPASNLEKSEFNGFSNEELLD
                     ELYKQKNAEVIQNFIKLNMLSNAAKKAKEVKNFTHEKEFYTWQKSLDEMVDEVIVKDN
                     QKYPINFIQVGKMDKGTKEFLEKLNKKDLEDLYFTLSKNNLLHASPKRKANYNQALNA
                     DEIKQIVKILDEAKEVYWDDVNNSLLYFFEDKKDASRINKIVITPDYKLKKFGKTNAI
                     VTLGKVDARNKNEGNYIKIR"
     gene            23026..23400
                     /locus_tag="RTF91_000356"
     CDS             23026..23400
                     /locus_tag="RTF91_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDZ4943282.1"
                     /translation="MVLALGEFEFKALNFDNLERSLDFSIQSQNRLNNHNALFASSKE
                     SEKIKIQGKTLPLKGDRNTYLDKLENMAKEQKSYILTGANGKYYGKFVILALNENRSA
                     FVDGSGFVAQSFSMDLERDFDE"
     gene            23393..23584
                     /locus_tag="RTF91_000357"
     CDS             23393..23584
                     /locus_tag="RTF91_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDZ4943283.1"
                     /translation="MNKIYIATNNERLDSIVYKHYGTLLYFNQVLLANPRLEPLLKTG
                     DKVILPKIEIKESKEKALW"
     gene            23578..24555
                     /locus_tag="RTF91_000358"
     CDS             23578..24555
                     /locus_tag="RTF91_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDZ4943284.1"
                     /translation="MVKKPKFKLIAKGKDITQKLSKNLISINYEDKEKAESDEISLSV
                     FGLYSKPLFGDSLELWLGIEKLFKCGSFSVNVVSKNYTSNITEVRASAINFSGKGNAN
                     IKEKKTRSFENTTLFTIAKKIANENNLKIKTSGEDQNIVSILQNNQNNLEFLYKLLFD
                     YGFICCVKENTLIITPKDGKIGENSANITNKNENLPLFEIALKECISLEISESARNEY
                     SAVIAEWQDINEAKVKSIKVGSGENVYKMQIAEPKSDNEAFKKAQAKLDGLQKGGING
                     RCELIGREIRAGGKLKIKDINMDNYEFSIKSVSHSFNDSAYTISVEFES"
     gene            complement(24581..24865)
                     /locus_tag="RTF91_000359"
     CDS             complement(24581..24865)
                     /locus_tag="RTF91_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002888031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDZ4943285.1"
                     /translation="MLSNNEYFEYFIDFVKNNDKREILKEFGGANIYIPSYKTLLRDE
                     ELKEDFKTLIKQGLTTKNASVECAKKYDLSLNAVYLITKELRENLEPSLF"
     gene            complement(24920..25366)
                     /locus_tag="RTF91_000360"
     CDS             complement(24920..25366)
                     /locus_tag="RTF91_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1018 domain-containing protein"
                     /protein_id="HDZ4943286.1"
                     /translation="MNTQNTLKKHLIKIIHTLRKDANLEDDESYRWVLNQRYAKTSSK
                     DLSIDELRDFAKTLGYDEKFLKKQNAKKARYFKNESAKSGKATKKQLDMIQAIWSKNA
                     KNPTQWALREFINNIIKKRPLHLWYLDTKEANKVILGLKNLENKYQ"
     gene            complement(25407..26369)
                     /locus_tag="RTF91_000361"
     CDS             complement(25407..26369)
                     /locus_tag="RTF91_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDZ4943287.1"
                     /translation="MNLDFLNEFKLKNKDLSEKLEFLIPDFLVKKAITIIYANGGSGK
                     SYLSAAISKALCKDARIKSIVYIDMDNPLNVLNERGFGKLILNENKFTYIHRSSLKTS
                     AYELLEMIESKGVANSFEGVFFVLDSLRNFADIDNDAKMMSLMSLLMNLRECGATIMA
                     LHHSTKDGRAFKGSNHIRNSSDCMYFLQKVANLEQGFEVLLSVQKERAGIKDQAFFIN
                     IKKLSIKNTDLQNAKISDKEEAFIDKVLKLLKEKSLSTSEILSALDVSRSDNFSRNTL
                     EKFKGIFWESELGGENGRTFVWKSLKADNKDSNDKELSLFGDEL"
     gene            complement(26407..26586)
                     /locus_tag="RTF91_000362"
     CDS             complement(26407..26586)
                     /locus_tag="RTF91_000362"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943288.1"
                     /translation="MDEIAFEECLLDLENITALLDVFVANDIDDISVEVCALISKNIL
                     IVKENLKRLKLNKVH"
     gene            complement(26588..27223)
                     /locus_tag="RTF91_000363"
     CDS             complement(26588..27223)
                     /locus_tag="RTF91_000363"
                     /inference="COORDINATES: protein
                     motif:HMM:NF014548.1,HMM:NF025304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDZ4943289.1"
                     /translation="MNLELFKKDNLEVRAIKDENNEPLFCLSDVCKILELTTPAKVAD
                     TIKREFELYELNSHSFDTGFGVKEFTMIDEAQLYYVMNNSRSKNAKPFRMWVNREVLP
                     SIRKNGNYMQKEFSKELYSLLNDLKQANCIKDKLKNENESLKDELIQNQRELLSFYKN
                     KDLKKVSTAPLCQDEIDQIYALYDQGFNFSAIAAKINRSKSSVRNYCLRRR"
     gene            complement(27585..27809)
                     /locus_tag="RTF91_000364"
     CDS             complement(27585..27809)
                     /locus_tag="RTF91_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDZ4943290.1"
                     /translation="MTAQEVKDFCKENNFTYKDLAQKLGWSEPSLRATIASGKISEQT
                     AAAINLLKETMELKKQLKDWETIKTILKNI"
     gene            complement(27819..28055)
                     /locus_tag="RTF91_000365"
     CDS             complement(27819..28055)
                     /locus_tag="RTF91_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005872515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDZ4943291.1"
                     /translation="MAKNDDNLIKKTCKDLGLTYKQLGEKIGYSESALNNASRQEKIS
                     EPLTFAINLYLENLKLKEELEDFITLKKILAKTL"
     gene            complement(28154..28639)
                     /locus_tag="RTF91_000366"
     CDS             complement(28154..28639)
                     /locus_tag="RTF91_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HDZ4943292.1"
                     /translation="MQISNLEDVNLALKKVAELSVKIEKINGEVTLACNEIKESRAGE
                     IKVLSDELKYIEQCITTFCENNKHEFAEKRSKEFTFGKIGYRLSKSVSLPRVKEKFEN
                     LIKALKSYGLNECITYKEELNKDAIAELEDSTLVKLGLKRVVKDNFRIEPKIESLEIE
                     N"
     gene            complement(28874..29212)
                     /locus_tag="RTF91_000367"
     CDS             complement(28874..29212)
                     /locus_tag="RTF91_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943293.1"
                     /translation="MALVYVATPYKALAVSQSQRKAQAISVAQQECLKIMRECEGFTP
                     VSPILQFSYLDENKHREVALKMGLELLKASDYIYMSNHKDAKYSKGMQEELALAKKLG
                     IKELVLELPL"
     gene            complement(29384..29569)
                     /locus_tag="RTF91_000368"
     CDS             complement(29384..29569)
                     /locus_tag="RTF91_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943294.1"
                     /translation="MTTMIKGEKADYSASLFEVKGTSIYFKESGAFVDVLKGVYPDYI
                     VQKIIHFHLNKKLNRSV"
     gene            complement(29566..29757)
                     /locus_tag="RTF91_000369"
     CDS             complement(29566..29757)
                     /locus_tag="RTF91_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma-70"
                     /protein_id="HDZ4943295.1"
                     /translation="MSFEEIAKELDLSTARVHQIYTEAIRKLKSPKNKDKWLAIFETI
                     DLIKKEKAKKENLMQGEKK"
     gene            complement(29760..30683)
                     /locus_tag="RTF91_000370"
     CDS             complement(29760..30683)
                     /locus_tag="RTF91_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDZ4943296.1"
                     /translation="MELVELTKKFLSTQNISQNNLADRLGINKSYMVGYMKEGSAYKY
                     ASKVEPLLEKYIKSFVEEKSVKELQTPFIATKDAKAINVTIESAMSNREMGVIIGEAG
                     TGKSRAIKEYANKNGTRVVLFEATTETSKRMLLVGLENKLNVCFKGSLDDKIRGIAAE
                     LARTSKVLIIDESEHLPFRALECLRRIYDFSNTALILVGTKKLKNNLTGIGRNDYNEY
                     GQLSSRIGAKWELKGLCYQNKEGLKNEDLKTLCSYFNIEDKKAIDLIFNLARGNFRKS
                     EKLLKRACDFADGKAVELKHIEAAASFLMLG"
     gene            complement(30890..32953)
                     /locus_tag="RTF91_000371"
     CDS             complement(30890..32953)
                     /locus_tag="RTF91_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HDZ4943297.1"
                     /translation="MIYLLETKEASQVFNVSAGALRLAVTRKSNKYEWLKVNNTKGGR
                     GGKKLLFKISKEQLLTAFNQELISKNILIFNEKMQKVDLSDINNSNTICIIKENDLNL
                     TESKINNDLTVLNLKFENLSDEIKNNAREKLKALKQVEKYIEGGLSVKRALMLCNIPW
                     RTYSRWRAKYKTNCIKSLIDTRGLHRKDKTKLSIWMQEYALREYRTFGAGGFNFTELW
                     WQIHKEAAIKENYDFIGFDLGKVKPLFSVKTLQNFIKNYYKNKPLEHCIITQGLDKAK
                     SKFLPAQGNQRELYDMKNMCWQIDSSPADIIVRDDVTQEPFRPHILSVVDVFSGMGVA
                     TLVGKSNSLSLTRLLWKAIDKFGKPDMIKGDNGKDYLSKDFQSLLDALNITYDAAIAY
                     AGEQKALVERRFGTIQHAGISKMHGYIGNNLAKREMIEQKTPKKDRRAKDEYGFAKKT
                     NQKLLHTFSEACEFLEAEVIKWNMSKVRRKKGIKTPLELWNSCDRAIVKITYEEFLFN
                     AGNKELRVVGKKGINFEGRVYKSALMPSVGTRVKCVQNIDNIKELFIYDLNGTFLCLA
                     LDESIAKLSAESYKILKKGYESEVKAIKEVLKKDEIAAFTKLNIKQDLQDLQSAFENS
                     LVEAKEVHQKSLAKEALKTQRELEYIKNNANADELILNAKKEITNDESEFDMEAFVEK
                     KYFTG"
     gene            complement(32950..33150)
                     /locus_tag="RTF91_000372"
     CDS             complement(32950..33150)
                     /locus_tag="RTF91_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943298.1"
                     /translation="MLKQYFEDNGINLKKFAKKHNLDYMSLFRVVNGFYSEKYKAKTN
                     TKAVYEKLFELKIINELPEVCA"
     gene            33300..33974
                     /locus_tag="RTF91_000373"
     CDS             33300..33974
                     /locus_tag="RTF91_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDZ4943299.1"
                     /translation="MYKTKDILNRVYSLLNIIDDRNFCELYNIKPNTLSTWKARNTIP
                     YDLLFTISKEHNISLDAIFFDKLRIDNNNMQLRYYTDVAAAAGYGATNNQLEYTEITI
                     SKKFAYEALDLPISTKLDIIKIIGDSMEPFVHSGDIIAVDITKNKLELVKNGDIVVIN
                     LDGEIYCKKLLKQPFVNEIVLSSMNSFYKDIVVSVEQINHAEIIGVVCKAMTIKSFEN
                     AIIKYK"
BASE COUNT        11357 a         5606 c         4814 g        12199 t
ORIGIN      
        1 cttttaggtg ctctttgttt gctcatagca aattgcccca tacttgatcc aaaagaagta
       61 tttataagat aaaaataaaa agcagctctt tctatttcat tttttggttt aatttgtttg
      121 ttttttaaca tataaaagat ttttctactt actagcatag aataaagcac attagctaaa
      181 ctttgaggct tatttcttat acaaagatgt aaatttataa gctcatcatt aatatcatta
      241 atcacttcta tctttgaagg acttttttga taaaaaacac tcaaagctcc acaaaatact
      301 tcaatataac ttttatgttc tagcattaaa gcaatgattt ctttagctaa atagtttttg
      361 ccacccaccc aagcaaacgg agcttttaat ttagtttgtg taggtttgat taatgtgcta
      421 gtttttagaa agttgtctgc attattcatt gcattctcct ttcaaaataa aattaaaaaa
      481 gctttgtttt aaaaataaag ctataatatt ttgctagttt ttagaaaaag ggaagcttat
      541 gcagctttcc ttgctttcac tttgtctgaa gcaaattcat ccaaagtcgc atcactaaag
      601 gccacgcccg acctttcctt gctttcactt cttaacaatc cttgcaataa aatctttagt
      661 atctttataa atcatacttc ttatgctttg atgcaaaaca ttggtattgt ctataggtaa
      721 aaaaggtctt gcaggtatat ttttcttttt gctaccatat tgatgaacaa acccatattt
      781 aaaaccactt ttactctgta tattgttaaa gacttctacg ctatttttag taactttact
      841 ttgccaattt aaagctttac ttaactcccc atctcttttt aaaattcctt tattctttcc
      901 ttcttttatc ttttgcttta ttgtagctgg ttttaaactt ttccattttc catcaaaaac
      961 actgcgttca tttttaaaag aatccaaaat gctatttctt atactctcgc cagcacctgc
     1021 cataatactt tcgccgtgct tatccatgct tattaattta tcacaagctt taaaaaagtt
     1081 tttaagtcct tttacttcta tgtattcact catattttta accataaatt gtagtattaa
     1141 ttttgttttg ttcttgcttt cttaaagcat caaatacgct tttttgtata gcatttgcaa
     1201 attcttgcat attaaaattg ccatctttgg tcgctatgtt aaaagtacca ttaacactta
     1261 cattaatatt tccattatta aagcttggag tatgacttat attttttgcc ccagctaatt
     1321 catctttata agtatttgta gcaattattt tttctttgtt ttgttcgctt tggcttatct
     1381 taacttcttc atcatctcca aaccctacaa aatcaagagc atcttttata aaaccactta
     1441 tagatgaaat catatctcct acccaagaaa gcttagaagc aaaccattca aacaaagaac
     1501 caaaaatact ataaaagaaa tccccaatgc cttgccaaat agagtttaaa aactcagcta
     1561 aaggagacgc aacactcata ataatatctt taaaacttgt aaatacaagg gcacatttat
     1621 caaatacagc tttaatgaca ttatatatag gctcccaaac aggtctaagc cattttataa
     1681 aagacatgaa ccaagattta accttatccc aattagcaat aacaagccca gctacgatgg
     1741 caataccacc caaaataaga ctaatgggat tagtcatcat agctacactt aaaaccctaa
     1801 tgccaacagc cacagcctta aaaactttac caagccctcc taaaacaaag gacaaaactt
     1861 taagagaagc tgtataaata ttagtcgtga tggtttttgc ttttaggatg atgttagaga
     1921 gtatgcaaga attacgaaag gctaaaagat gtattcttgt cttaatcaaa gcacctttaa
     1981 gtaaaatggt gcaatcttta agatagtttt tagcaatagc ataagctaaa accgcaggtt
     2041 ttgcaagtaa aaaagtagct ataagtcctc ctataacccc attaagacca gggataagtc
     2101 ctgtgatatg ggtgatgcca ttgacaagat aagaaatcgc tgcacttagt tttgatatag
     2161 caggtaaaaa aaccgaacct aaattaacag ctaaagcatt aaaagcattt ttcattagtg
     2221 taatagaatt ttcagtggtt gctgctcttg tatcaaattc tctctgtaaa gaaccttctt
     2281 ttgcttcatc gctagcattt tttaaagctt ctttgtaagt atcaagtcct ccaacaagtg
     2341 ttgccatatc atctgcaaat tcacgaccaa aaatatcaac taatattccc atttgttctt
     2401 tttgatctag ctttgctatc ctttctaaaa acatatctaa acctttttga ggatcgttaa
     2461 aactagcttg ttttaaaaat gctccactta taccaagttt tgaaaaagca ttttctgctt
     2521 ttgctcctat attgtcagcc gtagctaaaa cacgatataa actattaata gctgttcctg
     2581 ctacttcagg acccttacct aaagatataa aagaagagct taaagccgca atttgttctt
     2641 tagtaaatcc tatttgtttt ccagcagctg cggttcgttt cattacatca ataatttctc
     2701 tagctttaga tgcactatta tctgaaagat tgttaatgct atctcctaga tcttgcattt
     2761 cttttaaaga aatacctaaa atatttttaa tttttgcaac actatctcct acatcttcag
     2821 cactcatatc aaatgctacc ttcattttgg ttacaaggtt tgtaaattct cttacatctt
     2881 ttgaaccaag tccaatctgt cccccagcag tagcaatggc tgctaattct ttagcactaa
     2941 ctggtaaagt ttgagacatt ttaagtatat catcacccat ttttttgatg ttatcgccct
     3001 catcaaaatt cacaactttt ctaacatctg ccatagcaga ttcaaagcca atagcttctc
     3061 ctaagccttt accaataatt ccgcctcgaa taacattgcc taaacttaaa aactcatctt
     3121 gcaaaccttt tctttgagct tttaattctg ctcttaaatt ggcattgagc ttaagagtat
     3181 ttaactcttt ttgtaaccca ctaataccaa gcttagtttt tgctgctatt ttttctaaat
     3241 tgctaaaatc tttgatcatc ttgccaacag cacttgtatt tttaatagcc agtcctaaaa
     3301 taacaccaat tccaatactt ccagcatttt ccatattcag ccctttttaa gtgattgtat
     3361 tttaaaatct ttgctatgaa agttttaaaa tttattaacg atgatgcaat ttcgcacatt
     3421 gctttattgc taacaacact tatacctgct tttcttataa gctatcaaag tgcaagtgat
     3481 ggttttttta atacaatagc tatttttatt ttttcttatt ttataagcat tgtcataact
     3541 gctattttaa tgatgattat gccacctatt gctctattgc ttattttacc cacttggcta
     3601 attgtaataa gtttagattt tattcttttg actattttaa aaatttattc ttttaaaaat
     3661 aaaacaatca aaaactctta gcctttaaaa actcttttga aattgccaaa gcttcttcaa
     3721 attcatttag gcttaagtct aaaacttcat taagtcccca atgtaaagta tgacttatga
     3781 gagctacagc ttctaagcta taactcctgc ttctaccaaa aaatctttta aagcgtcttg
     3841 caaggctcta aaatctttga gatttaagtc ttcaatttca ctttcttgct tattagtaag
     3901 cgtagctatc atataaatag tttgttccat ttctttttca cttttattgg tggcattttt
     3961 taacacgcgc acatttggtt ctctcatttt taattcttcg ccattttcaa gtttgattat
     4021 tttttctttc atttttattt ccttttttaa gaagcaaaat taaagcttat attatttgtt
     4081 tgttttacaa agccctaagg caacttttta cttttaaaca ctgattaatc agtgtttaaa
     4141 gagttaaatt acttctaaca tcactcatca tatccacccc atttatcatt aaaatagtat
     4201 ttttatgatc gtagataatg ataggaatgt tatttcttct ttgcatataa aaatgaaccg
     4261 ctattttaat ttcagcttcc acttctttac cgctttcatg atcgctttcg cttatgctta
     4321 taaactctcc taaaaactca gcactaatac catagttttt accgccttta tgaacacttt
     4381 ctctaagcaa taaaggagct ttaatttcac taaaagtagt atgaaagaat gctgcgtaaa
     4441 gtaccggatc aacaacggct aatttaaagc taatttctaa aggttttaaa acaccgctac
     4501 tataatttgc ccccaagact cctttagttt caatcatttc ttgttctata tcaggaagct
     4561 ttaaatttct aaccactcca agataacctt gcccatctat ataaatatta ccttcttgaa
     4621 taacttcgcc aattatcctt ttcattttta ttgtctcctt ttaatttttt tagctatctg
     4681 cactaatagt tttaattaaa tcacttgccc attcatcaga gtagataaac tctaaggtga
     4741 tttgttttac aattggatta ttcatcattt ttacattaag ataaaatttt ccagcactca
     4801 cattagcatc tgtgtttctt tcttcatccc aagaaacttc ataaccaatc aataccttag
     4861 ctccttttaa atctcttaaa agttcctcaa tactgatttt tataaaatat aattcacttg
     4921 cttttttatc gattgcttta aaggctgctt tttgtcctgc tatggctata cgatcaaagg
     4981 ttcttactct tgctaaatct tgccaaatcg tatcttcatg agaggtttcc ccgccccaag
     5041 aacgataacc ttcagctaaa atacaagttg agatgtgagc attccttaat ctttctgcat
     5101 cgcaatctga gccattgata aattctataa aatgctctgt tccagtcact ccattcatca
     5161 ctctatttga ataagaatcg ctaaagccat attctttatc cccatcagta tgagctatca
     5221 ttgctgctac gattgggctt tgtggaacat aagcataaga tcctcttgta tttaagattt
     5281 gaaccctagg ccaagcggca attaatcttt tagagctaaa agcctccatt gtattaatcg
     5341 cttctccaac atttgaagca caaagatctg ttatagctgt gatattcata gaacttgcca
     5401 cactttcaag cttagccttt actcctgctt catgtgagta ataaggagca atgattaaat
     5461 cagggctaaa acctgtttta tgctttgctt ttttaaaggc ttctatggca ttaacaatac
     5521 tagttaaagt gttttcactc tcttcgcttt cttcaaaaaa gctaatgatt attgcattgc
     5581 ttacattttg taaattgata cactctaagc tgtcaagcaa gcgataatct tgcaaattat
     5641 gctctttaat caaatcactt acaaattcct ttgccttacc tacatttgaa aaagcaaaaa
     5701 ttggcatagc ctctacactt tcatatccag cctttgtata aatcatttct ttacttgcac
     5761 cttttatagc tgcaacaatt cctattggtg tatcactttg cactttaata ggactagctg
     5821 ccccattgct aatattaaaa ttaactccat aatttgctgc cattatttaa ctcctttttt
     5881 ttgttttatt ttttgcagcc acatttaatt cacttaaagc acttgctttt gtaaatgtag
     5941 ctcctaagtc tttaagctta ttttctacaa ttctaaatct ctcatcaatc tcatctttaa
     6001 actcatcata aataagcttg tctccttgta cattaaaatt aatggtaaaa tctgtatcaa
     6061 tctctttgct atttggattt aaagaattaa actctttaaa aagaacatca tctatataga
     6121 ttttaacatt tagattttca ctaaagaagt ttccacccgc tccataaccc caaggagtga
     6181 atttaaactc ttttataggc ttggagagct cacattctat ggtatagaaa ggatctttta
     6241 aaccatcatt tgctaaaaat acacttatag ccgtttcatc gtattctcta aaagcgtaat
     6301 aaggagcgta acgattgcca aattcataag ctccatttga agtgattttt acctttgcgt
     6361 atgagccttc tgcttgaaag ctttctaaac taaaatcagc tggtaaggtg ctagcgtgtt
     6421 catttgatgc tttatttaaa gtttcatttt ccgcagtagt taataaaagg ttattattag
     6481 aatcgtcgat aaactccaaa ctattaattt ttaaaaactc atcatctcct gttaacttta
     6541 tgccaagcct tgaaagggtt aaggttttta aaggataggc tgagcttgtt tgtttggcac
     6601 taaactcaac ccttaatttt ttaccatcaa tgatttgcaa ttcttttaaa ttagagtttg
     6661 catcttcgcc tttatcaccc ttgatacctt taaccccttc gagtttttta tcaattagct
     6721 cattcactct tttttcatcc atcttttcgc tagtgatagg atcatttggc tctactaagc
     6781 cttgattgtt atcaggggta taagaaattc cataatcttt cattttaact ccttttttat
     6841 tgatttaaat gcacatttta aagcgtgata aatattgcat gagtggtaaa atacaaagat
     6901 tttaaactta gaacatccaa gcaaagtcat agcttctttt aaaacaagat cagctatttt
     6961 ataatcaact cttgattttg ctttttcaca caaaaaatca tgcaccacac aagcactaaa
     7021 atactcgctt ttaaaaggtg gaaataaaga ccaaaaaagg cgtgggatac ttgccccatc
     7081 tgttttaaag ccttttggaa caatgccttt acaatttggc aaagaaaaag cataatcact
     7141 aatcacttca aatctatctt tgtcaaaggg ctttacacaa acccttttta attctgtttt
     7201 agtcattttc attctcccaa ataaattcaa gtctcaaaaa gggcaaattg attgcctgta
     7261 tatgataaaa ggcatttttt gcttgctttt catagtgata ttcacgcata gctcttgtgg
     7321 taaaaaagat aaaattctta taatcttttt taaagctttt ttgattagct tttaagaaat
     7381 aagaaatatc atagacaaaa tagccttcta aaacttttgc ctcatcaata agtttattcc
     7441 aataaagata ttctgtgttt atatgtggga tttttgttct ttgctcttct ccataagttt
     7501 gaatttctcc accgattaaa gccatccaaa caaaattgtc aattacttct ttagaattaa
     7561 tataaaaagc atctttttta ataagaagct ttatttcatc tttagaactt aaatgatgta
     7621 agcagtgtat atcatcttta tcaagatcta gttctttaat gttattatta atgctaatga
     7681 aaaaattact cttatcataa agtttttgca aaagtttatc tcttgcaatg atattctcta
     7741 aagatttttc tctttgttta agttcaaagg ttgcttttgg aagtctttta tctttgtgtt
     7801 tattcatttg attttgtatt aaaaaggtat caaggtattt attagctaaa agcttattag
     7861 gcttataaaa actaggatta tttttataaa ttgctttttg caaggcacaa gtgtaagctt
     7921 ttcctaactt agtatcattt ctttcaatgg tacaacttgc tttacaataa tgaaaatact
     7981 cacattctaa acaatcctta tgaagttcta aattgttctc cattaagctt atattgatga
     8041 tattatttgc ttttaagctc tcatagcttt gatgaaagat atttccagct ttcaattctt
     8101 ttaaagcttg agagcgatga catatataag tatctccgtt tttttgaata agcattcttt
     8161 gtccatcggc acaattaaca caacttacac aataatctcc taaaaattct ctaaaccaaa
     8221 tgtgttctaa agcaaaggca tatttggtat tttttaatct ttttcttaac tcattataaa
     8281 aattaagcat tgctttatct tcagccattt taaaaatacc ttgtgcatta gaactttggt
     8341 aagcaaacat tatgtaaaaa tcatttgcca tatcataacc caagctttca attttaaaaa
     8401 tatcttctaa aaactcatct acatttaaac actcgcttgt catcgtggct gaaaattgtt
     8461 taaaatgtgg atatttcacc aaaagtttaa tcatttctaa agttttttct aaggtgcttt
     8521 tgccattttt taaaactctg tttttttgat gaagtcttaa aggtaaatca acactcccgc
     8581 taatgcctac tttatgtttt acaaataaat cataaaattt atctaaatta taaagattgg
     8641 tttttagatg agtataataa cgaatggttt tgtgcttatt tagaagcttg atatagtctt
     8701 tattttcttg ctcataagca ctaatagctt ctaagagctt tttaacatcc tcataaggac
     8761 ttgctgtaag ctctgaaccg tgtaaaaata cttcagtgac tattacattt tcacttttta
     8821 gtttagcaac tattttatta aattgttctg ccatattgct agttttagaa tgcttatttg
     8881 taagcttccc aagataacaa taagtacatc cgaaattaca ataagtgttt ggtacaaaag
     8941 ttaaagatag agctttcatt ttaaaacccc tttgcttttt taaaaagctc atttacaaat
     9001 tcatcactta gttttgcttg ttgttgaaaa aataaaataa gctcattttc tctttcaaac
     9061 tcagtcgcat attcccaatt tatttgaata gcttttggag cactttgcat catggtttct
     9121 atatcatcta aaagacccgc ttccaaaagt gcaagtttag cctgtctgat tgtaattttt
     9181 ctaggaattc cgttttcatt aaattcttgc aatctttctt gcatttttag actattgttg
     9241 atacgatttt caacttcttc tttaatgaca ctttgagcta gttctttaag agtaggaata
     9301 ttaatttgtg ttttatctat tttagagtta gtctgcttta actcatcttc tggtagcaaa
     9361 atcgcttgtt tttctcccca aacaaatgta taaatttcat agataaaaaa atcatattta
     9421 tcatcacttt tattcaaaca agcctcaagc gagtttttgc actcatttaa gtgttttgcc
     9481 ttgtttaagt tttcttgttc gtttttatct tgtaaatctt gtattttttt attgactttt
     9541 tccaaagtat catttaaata ttttttatca ttttcgttta aaatataaaa cataatttat
     9601 tccttaaaaa ttatttccca ttgaagtacc agatgcatac acaaattcat cttgaaaaac
     9661 tccatttaaa aaaaacttgg cataacgttg atagtggcta tttctgccgt cacctcttgt
     9721 ttcagtttct atagttagct taggtgttga agaattaatt ttactcgtaa gttcagttct
     9781 tagagcatct actaattgct ttgcgacacc tgcattttct tttttgttta taagatttat
     9841 caattctatt tttaaaattt catctaaaga agctgctaca cctttatctt ccttgctatt
     9901 cactaaagca ttaatcttaa gttcaagttc aagctttata gcatccacat aatccctact
     9961 tgccatgatt acgctaggat caagttttaa gataacctct tctgcattag aaagctccat
    10021 aacgatttta atcataagct ctttagcact gccttctttt aggataggct tgtaagtgcg
    10081 tggtaaattt cctactgcaa gtaaatctcc tacttcatca taaatgccta ctgcattaac
    10141 ttcaaatccg cccacatcac ttggcatatg gcacattaga ttcacatagt ttggattgct
    10201 ttcatccaca cttttgctac taatgttagc ttcataaaca atttcttcta agctttgcat
    10261 ttcttcattt ggtaaaataa ccttagagct taatttaaag ctttttaaat taacgccatt
    10321 tccactagca cgagccgcaa taaatttagc aataccaatt ttagtcaata tggtatagta
    10381 ttcgcttttt gccattaata cactccttta aaatcaatat tagtttttga aatctcacac
    10441 ataaagattg cgtttgcatt tttagtgctt ttaatttcat tttctaaaaa agtggtttgg
    10501 aaaggtaaaa tctctatggc ttctccgcta atctctacac tagcattaaa gctatcattt
    10561 ttactttcaa tttctatttc aatagcctct aaaacgcttc taacattttt aaaatcttta
    10621 attaatcttt ctaaagtatt aagcgttctt tcatcaaagc taacattagt cgtacttact
    10681 ttaactttaa aaaagtaagg ctttccgcta tactcaaacc actctttaac caccgcggta
    10741 ggaaacactg cacacaaagc ctctttaatc gcccaagcag tgccattata cctatctaaa
    10801 agtaaggctt tagatataag ctttctagct tctttttcgt ttaagccatc tatgcttaca
    10861 tcataagcat tggctaatac tggtaacaat ctttcatcgc aatgctgtgc aagattggta
    10921 atactggcta aatttaattc ttcgaatctt gcctttgcac ttaagtcaat ggctttgctt
    10981 tgttttggat ggtggtttaa tattagggta ttcatagcac tgccttttca tagctaagta
    11041 aaaagctaag agttgcaaac tcatcatcat ttattaaaat attttctaaa ggcaagtctt
    11101 ttagctcctg cttttcttca tttataattt tttctttaat acttaaaatt tcacttttat
    11161 aaactccgtc ctgatgaagg catttataaa taaagcctag tgctaaatcc acgcttaaat
    11221 caaagtcttt ttgcaaagca ttaatcttct cgcttatttc attcgctcta gaaagttcta
    11281 aaagcaaaag tttagcatct acgataaatt ctcttttttt ggctaactca acgcttactt
    11341 catcggttaa aggtcttcgc tcatctgcat ttaaatactc tttaaccaca tcaacactta
    11401 attcatcttc acttttaatg ataactctaa cttttcctgc tccattattt aaagctttaa
    11461 ttgaagctac ctttgcactt gcacttaaag cgtgatagat atagcctttt tcacttcctg
    11521 cagttgaaaa tctatgcaca ctcatcacag ctctttctct taaactctca tcactttctt
    11581 cgctagctcc gccgctaaaa tattcaagtt gttttatttt ggctacaaaa ggtagtgggg
    11641 tttgtaagaa ttcagttttg ctctctttac tttgtataaa ctcatcaagc tctaaaacac
    11701 ccccggcttt attttgtcct tttttgatta tcacttcttc ttttaaggtg gcaatatctg
    11761 ctttttcatt tgaaaaaatc gcaccttttg ggatgattac atcataagtt agaatggcat
    11821 ttaactcaaa ctctacttta gcactaggtt taactccttt aagcctttcg attaaatacc
    11881 cattagctac tacattatct aagtcacttc cgctggcata atgaagataa gttgctttta
    11941 tactctcatt aattcttgct ctaattatca tttccctata agtaagagct tctaaaatag
    12001 ccttaaatgg atccgattct aaaagctcta cattttcatt taaaaagctt ttaaaaagct
    12061 cttcaagatc ttttaaaatc ttttcaaaat caagctcttc tatgattttt ggataaggaa
    12121 tatgctttaa aaaactttgt ttaaaatagc tatcatttgc acttaaaagc tcactcattt
    12181 tccaaactcc attgttaaat cctgatggtt ttcaaaaagt aaagtaatac ttaatttatt
    12241 atctttacac tcattaagcc taacaccttt aagttttact cttttttccc actttgaaat
    12301 agcctctgct gtgtatctag taagtttgat tttaaaatca tcatcaattt ttctatcaat
    12361 taatgtataa agtaaagaac catactctgg tctcattacc cttgagccca agggagtgat
    12421 taaaatgtct ttaatgcttt cttcaatatt taccatgtaa ttcattctat actccacttg
    12481 ccaccatctg ctgtgtcaat tgctttggcg ttttctttga tttcttctac aacagctcca
    12541 gctaaagctc ttaaaaatgg catagaatat cttctatatc ctctgccatt atcttcatct
    12601 tctacttttg tatagccttg gctttgtaaa tgtttttcca ttttcgaaat caaagagtct
    12661 tgtgaaattg ccattagatt ttactccttg tattgcttga gccatgtgga tgcgggcttc
    12721 ctgtaaaagc acaaatgcat tcagttgtaa caaccccttt gcctccaagt cctaaatcaa
    12781 tactagggct atcaaccaaa actttatctg ctttaatatt tgcattaatg caagtaatgt
    12841 ttatattttt agttacatca agctttaaag tgcttgtctt agagttgtac tctaaatgcg
    12901 ttccatcttc aaagtctata ttaaaagtgt ttgtatctgt gtttttggct ttgtgttttt
    12961 cttggtaaag cccacgcaaa atgactccac tgtttaagtc cccacgcaca ggcattacta
    13021 aaacttgctc tcctattctt aaaggcgaaa agcttactgc ataagaatta gagaatgttt
    13081 gaaaaacact taaaaaatca gttaccattt ctccaatagc aaccttagct ttgttgtctt
    13141 taatgtcgca aatgatgcca agttcgttca ctatagtttt tccatttttt tatttataag
    13201 cttttctaca agctgctcga ttttaagtaa tgcatctgtt cccatatagg ctgcaaagcc
    13261 acccactgca acgctaagtt ttatcccaaa attaagataa tttactattt caaaaactaa
    13321 gtatgctaca aacatagaac ctagcatgcc ttttaaaaag agtgcaaatt taccttttaa
    13381 attaagagct ttactaagct tatttttagt tacaattcct acaagaccag ctataaagct
    13441 tactatcatt aaaaccatat atacaaatat atcttctaat ttcattgcta gttccttgta
    13501 aaaatttcaa atgcataaaa caaaattaaa gcaaaacttg aaaataaaag agctatgaag
    13561 caatctttta aaattctttt ttggctcatc aatttattat tttctttcat ctttctctcc
    13621 tgtacaaagc ttggctatat tttcaacttc taaataatat ttactaatct ctttagcact
    13681 ctctaaattt ccataatcaa aaggctttaa aggaagtttt aaagggcact taataggaac
    13741 tttaagctct ttaaattctg ttttgattaa aacatcttta gaagcacaag ctgtaaaaac
    13801 aaaaggtata attagtagga aaattctcat tttatcattc acttttttgc tcctaaaata
    13861 ttaaataatt ctttataagc tttaagttcg ctctggcagc ttttatcttt gataaaaact
    13921 ttatccactt ttaaaacttc ttttaaagtc tctttaggtt ttaaatcaag ctttaattta
    13981 tcaatagctt cattttgctt ggctaatttg tctttaaaaa tattaatttc attattaaaa
    14041 tgcaaggctt taagctttag attttcattt tctaaactta ggacattgtt tttaaaatgc
    14101 aaaaaaccac aaagaatggc taaagcaaaa aaagctattt ttgaagggct taaaaacctt
    14161 gacaaaataa aactaaacat atattttcct ttttgatgtt cttttaacgg cgaaccaagt
    14221 ccttatttca cgtgattatt gtaaaacaca agacttcatc tgcgaagttt tcaaggataa
    14281 gtccatcttg cttttttgcc tcttgtgtcc aaatgcacaa aacctgcata aggatcatta
    14341 aaattatgct ttatagcaat tcctagaccc ctttcgccgt atctttgcaa aacatattga
    14401 tgcacatctt ctgtcttaac ccctttaacc acaaaatcag ccgcacttcc taaagtatgt
    14461 tggcttttag cagctccgcc aatctctgca ttatgagaag cacatctata tccactattt
    14521 ataataatag gagcattata atgttctctg atttcacaaa gaatgtctat aagctcattg
    14581 cttggtacat tttgaggtaa ttcacacttg ccacatttgc atttaaattc gccttcttta
    14641 aaataagggt tatttttcat tttttcactc ctttaaaatg tcgtaagttt agttaaaaag
    14701 ctaaattaaa aactagaaaa attttgtgct aaaactcttt gaaaaaataa tttgcttgaa
    14761 taaagaaaga actcatttta aaattgcggc taatttttga aggatgaaaa atgcttaaag
    14821 attttgaaaa cgagctttta gaactattaa aagattttaa agcaaaaatg tatttaggcg
    14881 agtttgaaga tactcaaaat atagcaaggt gcattaataa tttagatgct tcgcttttgc
    14941 ttgattttga aggagagagt tataaagatt tggaaaataa agtgggtact tggaagcttt
    15001 atattttaac ccatacaaaa tcaaaagcac ctgaacgcag aattgatgct aaacacaaat
    15061 tgtttgacac catagaaagc gttgataagg tgcttttaaa tgcagaactt agcaatggtt
    15121 ttagaatcga gataaaagat cttaaaaaag tttatgaagg aattagtgat catggctatt
    15181 taagcattta tgcaagaacc ctacaaagtg gttttttgcc aaaagatgat tttttaagga
    15241 tttaaaatgc tttttatcaa taaagaaaac ttagttgaaa ttagtaatga caagcctata
    15301 aaagtggcta ttaagggtga gtggaaaggg cataataatg gtagatttaa ggttgatgat
    15361 aaagatttaa actcaatgat tgaaaatttt aatcaaaaaa agattgattt ggttattgat
    15421 tatgaacacc aaactttaaa aaacgacaaa gcaccagctg cgggttggat taaagagctt
    15481 tacttagaaa atgatgcgtt gatggctaag gctgagttta atgaagaggc taaaaattat
    15541 atagccaata agcaataccg ctatttatcc cctgtgtttg aatttaacgc aaaagataat
    15601 aaaagtggag agttagtaag agctaagctt cactcagtcg cattaaccaa cacgccattt
    15661 attgatgagc ttggcgaact cattgctaat aaaaacaata ttcatcaaaa caaaggagag
    15721 aaaatggatg aaaaaatcaa agagctagaa tcacagattg tagctttaaa aaatgaaaac
    15781 agctcactag cttcgcaaaa tgaagcttta aaaaagcaaa atgaagaaag tgctaaaaac
    15841 ttagctagtt ctttagttga taatgcttta aacactggca aaattgctaa ttctcaaaaa
    15901 gaatgggcat tagcttatgc ttgcaaagat ctagaaggct ttaaaagctt tttagatatt
    15961 aaggacactc aagtccaagt tccaaaaaac aatctttttg caaataaaaa tacagcaaaa
    16021 actaatgagt ttgatgttgt aaaaatgatg ttaggagatt aaaaatggct aaagctaaaa
    16081 aagaaactga gaatttagaa aataaagact tagctaaaac cttgtctttg gaagatgaaa
    16141 atatagctaa tgaagaagct gagagtgaaa atgaagatga taaagagcct acaaatgaaa
    16201 aaggagaaga aatgccgcca aaagtcatgc caaaaagttt aagcaatgat cccttaattg
    16261 ctatgccaaa aagtcttgaa agctttatca ataaagactt gctttcaatc aatgcaaaag
    16321 taaatcttga agttaatgaa agtttagctc ttggaacgct tttaattagt gaagattttg
    16381 gagaaagctt taaaaaatgt cccgatgaag atattagctc taaggaaaat atcaaactag
    16441 gaatgcttaa agatcacgct cttaacacag gagtttatgc ggttttaata gtaggtgaaa
    16501 tcaatttaaa aggcgttcat gcaagtgcag ttaaaaaatc ttttatgcaa aatttaatta
    16561 ttaatattaa ggagtaaaaa tggaattaga gcaactttta gaattatttt caagcacaaa
    16621 agtaactgaa gttatcaatc aaaccaaagc ttcgcctcgt tttgtgagtg atactttttt
    16681 taaagaaaaa atcccaagtt tagaaagcac cgcaagagtt gaaattataa aaggtgcagg
    16741 tatcgtgtta aatagcattt cagaaaatgg cgaacattct ttagaagaaa ctagagatgc
    16801 ttatatttta aatatacctt taccacgctt tgcattagca aaaagaatca gtgcaggcga
    16861 aatcaactct ttaagatctt tagctttaca agaagctcaa gctaagagtt taagcggagc
    16921 tattggggtt ttagttaaag aaatgaaaga aagctttaac accacacttg aatatatggc
    16981 aaatggtgct ttatttggca agattttaga tggtaaagga aatgtacttt ttgattttgg
    17041 tagtacaagc aagaatgtgg ttaaggttaa aaaagacgcg agtacaactt tagctagtgt
    17101 ttgtgatgca atcgatacgg ctattattga tgaatttgga gtaagtgcag attatgaagt
    17161 gctttgtgga aacgaacttt ttgcagctat ttctaacctt gcactaagtg aagatcttta
    17221 caaaaatcat cttgcaagtc gtgatgaaaa ggacaaatcc ttaattttgt atggcactaa
    17281 ataccgccgc tatagtgcaa aatacaaaaa tacaagcggc aaaagcgttg aatttttaaa
    17341 aagcagcgaa ggcatggttg ttccaaagga taattctaat cgcatttatt acacaagagc
    17401 aaatcatact gaagccttag gaaaagcacc aagtttaatg tttgtctcaa aacctgaaat
    17461 tttacctcgt ggagctggaa ttgaaattgt aggtgaaatg agagccatgc cagtttgtac
    17521 tagaccaaat gggcttatta agcttgtttt agaataaaac gcacaatttt agctttaaaa
    17581 gcattttttg cctttaaagc taaaaagata ttaaaaaaag attttaaacg attttaacca
    17641 tattttaacc acattaaaaa aggtttttaa aatgaattat caagacactt tagaagaaga
    17701 acttatcaca gaagctaaaa cgcatctttt tatgatagat gaaaaagatt tgataaaaga
    17761 gctaagtgtt catgctatag cagagcttag tgatttaaat gcagatgggg tttgtgataa
    17821 agaagtgatt gatgatgcta ttaacgatgc acaaagttat attgcaagtt ttataaagat
    17881 acctaaaaac ccaacttcgc ttttaaaaga tatctgtgta aagcttacaa ttatggaatt
    17941 aaaacgccgc aatgattttc caaaagaagg cttagaggat attagagaat gggcaaatga
    18001 tttgctttta aaaatggcaa ataaaaaaat tccaactgaa attgatgagg atgatttttt
    18061 tccacaaaat aaagttagag cgtttaaaat taaaagaaaa agaatggatt taaggagaat
    18121 aaatggctaa taatgaatca aaagaactcg caaaagagct ttatattaca ggttttgata
    18181 tatttaaaat tgcaaaaatt ttaaaccgca atgaaaaaac gattagaaat tataaagcca
    18241 aagatggcga ttgggataag caaaaagcta atcttttaac ttcaaaaatc aaagataagg
    18301 aaagtgcttc tttatacgaa agttttactg agcaaatgtt ctgtgcgatt gaaaatatca
    18361 atgctgatga aaaaatgaat gccgagaaaa aaactgaagc cattgcaagg ataggagata
    18421 gcttttcaaa aatgagaaaa gttgctcgtc ttgaagatcc aagcagctat cgtttaaatg
    18481 ttgctaaaaa agtggttgaa attatcataa gtcatttaaa aaatgataaa gattgcgtga
    18541 ctaaactcgt atcacttttg gaaagcggtg ttatagaaaa agaaatttta gcaatggata
    18601 tttaatgctt ttttccaaag aagagcttga tgagttttta atcttaaacg agcaaaaaca
    18661 cgagaatact ccaaatgatt taaaaagtgc tatgcaaaga aaagactttt tggaatggat
    18721 ggaggaatta aaaaatgaat taaaaactca atttttgcat gagagccatt taaatcctgc
    18781 tttaaaagaa gagagaatta aaagagcaag tgtggatttt gattattttg caaaaactta
    18841 ctttccacat tattttacca ttaaaggcga gtgtgctttg catttgcatt taaatgaagt
    18901 ttttaaaaaa atcgcactta aaaaagaagg taaaggagaa aaacacgcta tagccgcacc
    18961 aagagcacat ggtaaatcaa cctatacttc gcaactcttt cctttgtggt gtttagtttt
    19021 taattataaa agctttatag tagagatttc agatgcagta gaacttatgg aaggaatgct
    19081 tgaagctata aaagcagagc ttgaagataa tccacattta aagcttgatt ttcctgaagt
    19141 ggtaggaata ggtaaaactt ggcgtgtggg tgaatttgtt agcaataatg gtgtaaagat
    19201 taaagctttt ggtagtggaa aaagactgcg tggggttaga tatggagtta aaagacctga
    19261 tttagttatt ttagatgatt tagaaaatga taccaatgtt agaagcaaag atcaaagaga
    19321 taaattagaa gattgggtgg atgaagcggt tttaaattta ggaagtgctg atggaagttt
    19381 ggatgtgctt tatattggaa ccattttgca taatgatagc gttttagcta gaaaattaaa
    19441 atttggtttt tggaatccaa aagtatttcg ttctatcgaa gagtttccac aaagacttga
    19501 tttatgggat gaatacgcca cactttatag aaatgttgat tttaatacag ctcatcaatt
    19561 ttatttaaaa aataaagctt taatggataa aggtgccaag gttctttgga acaaagctaa
    19621 gagtttggaa gatttaatga agttaagagc tgaaaatcta aaagctttta ataaagagca
    19681 acttaataat ccaagaagtg aaaatcaaat ctttagccaa gaaataatta atttttatga
    19741 tgttttacca tccattaatc agtattacat gtacattgat ccagcaggag aaaaagcaaa
    19801 aagcgatttt acagcaatta ccattattgg caaaggtgca aagggctttt atgtggtaga
    19861 aagtatagta aaaatcttaa aagcacaaag cattataaaa accattttta atcttcaaaa
    19921 aatctataaa tgtcgtttga ttgaagttga aaccaatggc ggacaatttt tcttaaaaaa
    19981 atggttacaa gaaaaaagct tagaatgtgg agtatttttg cctttgcgtg gcaaaaataa
    20041 tagcgttagc aagtttgaac gcatcgaagg tttaagcatt gcctttgaaa atgaagaact
    20101 ctttttacat aaaagccaaa ctatgcttat aaatcagctt ttagattttc ctgaaggtaa
    20161 aaatgatgat gcacctgata gcttagctgg agcattttta ttagcacgca caaaaagcag
    20221 cattaagaga agaaagcata attttagttc tgtaccaaga gtaaggcgtt tttaaaggaa
    20281 aaatatgaaa aaagaaatta aatctaaaag agaagtgata ttaaaaaata atagtcttat
    20341 caacactctt ataaattcaa gctatttaaa tgtgcttaaa attagcgaaa acgatcaaag
    20401 aatgattttt aaagatttaa gttttaccca agctcatcaa tcacgcagaa gtgtgatttt
    20461 agctaaagag cttcaaatcg tttgtgaaaa tgaaaaaatc aaagaaagtt ttgagtatct
    20521 tttctatcct gatttaatag gacaaatctt agaaacctat ctttatggat taaatgtttt
    20581 tgaggttaat tacaagttaa aagatggttt ttattatcca attttaaaac aaagagattt
    20641 tagaaatttt ggttttaata aagaagatga gcttatttat aatggcaatg gctgcgagga
    20701 aattatagaa gataaaaaag caatttatgg actttttggc tctaattttt tatttaaaaa
    20761 cggcgacgca ttattaacta aactttattt tccaataaaa cttaaaaatg caagtttaaa
    20821 gttttggatg gagtttttag aaaagtttgg ctctccttgg gcggttgcaa aaacagatag
    20881 tgatcctgat gcactagctt ctgaaattca tcaaatgcta aatggcgata gtgcggttat
    20941 tgacaaagaa gaagagcttg atttaatcca gccaaagact aaggcaaatt ataatgaaat
    21001 aatagattat cttgataatc aaataagaag cgtggtttta ggggctaatt taacttcaca
    21061 agtaagcagt ggatctttag cagctgcaca gtcacataat caaataagaa aagatttagc
    21121 ccagcaagat ggtcaaatcg tactttttat cctaaatcgt gccattaaat tttttaaaga
    21181 aatcaataat ttcaaagatg aactttttgt acaatttttt agtgaagcag agccaaaaag
    21241 tgagctttgt gaaagagatt taaaactttt taacatgggt ttttattttg atgaggaata
    21301 cattaagagt acttataatg tagaaggtaa gcttataaaa gaacctttaa cacaagaaag
    21361 taaaacgcta aaagaaaata aagaatataa aaaaactcta tttgaaaaca aagtaaaact
    21421 agaaagtttt gaagaagatt ttatcgataa agctttagaa caaaaggaat atttaaaagt
    21481 tgatgagagt atgtcaaagt tttttaaaga gcaatttgaa agcattgtaa aagattgtaa
    21541 agattttgat gaagcactta ataagcttaa agaaaatttt tcaagcttag aacaaagcga
    21601 gtttgaaaaa catcttttta ttgccttaag taattccagt gttttaggat acttggagga
    21661 ttaaaatgtc aagtgtaaaa ataggatttt tttcagaacc tactaaggct attgaatatt
    21721 taaaaattaa aaaaccgcaa gctagctttg attgtgatga gctttcacat tcaacccaca
    21781 aaaaagtttt taccattgct aagcttatgg atgaaagctt gctaaaagat atgcaagata
    21841 ctttagtaga tgctataaaa aatggggata aatttagcac ttggagtaaa attgctgagg
    21901 aaaaattaaa agctaagggt tggtggggct caaaggaagt cataaactcc aaaacaggtg
    21961 aagttaaaaa aactcatttt aatagtgcaa gattaaaaaa aatctttgaa gaaaactcaa
    22021 gaaaagctaa agctaaagca atttatgaaa atcaaatgaa aagcactaaa ccttatttta
    22081 aatactgcac tcaaaaagat tctttagtta gagataaaca cagagccttt gatggtatag
    22141 ttttacctaa agatgatcct ttttgggaca cgcattatcc tgatgtaact atgcatgatt
    22201 atggttgtag atgttatgtt ttagcagtag gtgaaagtga agttaaagat ttaaaaaccc
    22261 ctgcaagcaa tttagaaaaa agcgaattta atggctttag taatgaagag cttttggacg
    22321 agctttataa acaaaaaaat gccgaagtca ttcaaaactt tatcaagctt aatatgttat
    22381 caaatgcggc taaaaaagca aaagaagtta aaaatttcac tcatgaaaaa gagttttaca
    22441 cttggcaaaa aagcctagat gaaatggtgg atgaagtgat tgttaaggat aatcaaaaat
    22501 atcctatcaa tttcatacaa gtaggtaaaa tggataaagg cactaaggaa tttttagaaa
    22561 aacttaacaa aaaagactta gaagatttat actttacgct tagcaaaaac aatcttttac
    22621 acgcaagtcc taaaagaaag gcaaattata accaagcttt aaacgctgat gaaattaagc
    22681 aaattgttaa gattttagat gaagcaaaag aggtttattg ggatgatgta aataattctt
    22741 tattgtattt ctttgaagat aaaaaagatg ctagtcgtat aaataaaatt gtaattacac
    22801 ctgattataa attaaagaag tttggcaaaa cgaatgcaat agttacatta ggcaaagtag
    22861 atgcaagaaa taagaatgaa ggtaattata ttaagattag ataaggcggt gagacttgca
    22921 ctcacaatac atagcccaag tgatttgggg tatcctacta ctacatttta ggtatcaacc
    22981 ttatcttttg aaattttagc tttatgtaac taaaaaggag tttaaatggt tttagcttta
    23041 ggagaatttg aatttaaagc tttaaatttt gataatttag aaagaagctt ggattttagc
    23101 atacaaagtc aaaatagact taataatcac aatgctttat ttgcaagttc taaagaaagt
    23161 gaaaagatta aaattcaagg taaaacttta cctttaaaag gggatagaaa tacctatctg
    23221 gataaacttg agaatatggc taaagagcaa aagtcttata tcttaacagg agctaatgga
    23281 aagtattatg gtaagtttgt gattttagct ttaaatgaaa atagaagtgc atttgtagat
    23341 ggaagtggct ttgtagcaca aagctttagt atggatttag aaagggactt tgatgaataa
    23401 aatttacata gccacaaata acgaaaggct tgatagtata gtttataaac attatggaac
    23461 acttttatat tttaatcaag ttttattagc taatccaaga ttagagcctc ttttaaaaac
    23521 aggagataaa gtgattttac ctaagattga aatcaaagaa agtaaggaaa aggctttatg
    23581 gtaaaaaaac ctaagtttaa acttattgcc aaaggaaaag atatcacaca aaaactttct
    23641 aaaaatctca taagtattaa ttacgaagat aaagaaaaag ctgaaagcga tgagattagc
    23701 cttagtgttt ttgggcttta ttctaaacca ctttttggag atagtttgga actttggtta
    23761 ggcattgaaa agctttttaa atgtggaagc tttagtgtaa atgtagtaag taaaaactat
    23821 acttcaaata tcactgaagt tagagcaagt gctattaatt ttagcggaaa aggaaatgca
    23881 aatataaaag agaaaaagac aagaagcttt gaaaatacta ctctttttac catagcaaaa
    23941 aaaatcgcaa atgaaaacaa tttaaaaatt aaaacaagcg gtgaggatca aaacatagta
    24001 agcatattgc aaaataatca aaacaattta gagtttttgt ataaattgct ttttgattat
    24061 ggttttattt gctgtgtaaa agaaaatact ttaatcatta ccccaaaaga tggtaagata
    24121 ggagaaaact ctgcaaatat tacaaacaag aatgaaaatt tacctttatt tgaaatagct
    24181 ttaaaagaat gtatttcatt agaaatttca gaaagtgcta gaaatgaata ctctgccgta
    24241 atagcagaat ggcaagatat taatgaagct aaggtaaaaa gcataaaagt aggaagcggg
    24301 gaaaatgtat ataaaatgca aatagcagag ccaaaaagtg ataatgaagc ttttaaaaaa
    24361 gcacaggcta aattagatgg acttcaaaaa ggcgggataa atggcaggtg tgaacttata
    24421 ggaagggaaa taagagcggg tggaaaacta aagattaaag atattaatat ggataattat
    24481 gaatttagca ttaaaagcgt gagccatagc tttaatgact cagcttatac aattagtgtg
    24541 gagtttgaga gttaagtttt tgtaaaaacc aaagaaaaaa ctaaaacaaa cttggttcta
    24601 aattttctct taattcttta gtgattaaat acacagcatt taaactcaaa tcgtattttt
    24661 tggcacattc tacacttgcg tttttagtgg ttaaaccctg ttttataagc gttttaaaat
    24721 cctcttttaa ttcttcatct ctaagtaagg ttttatagct tggtatataa atatttgcac
    24781 cgccaaattc ttttaaaatt tctcgcttat cgttattttt cacaaaatca ataaaatatt
    24841 caaagtattc gttattgcta agcaatgcta gtcctatttg agtgtttttg caaattataa
    24901 caaaaaagtt aatttttttt cattgatact tgttttctaa atttttaagc cctaaaatca
    24961 ctttattagc ttcttttgta tctaaatacc aaagatgcaa aggacgtttt ttaatgatat
    25021 tattaataaa ttctcttaaa gcccattgtg taggattttt agcgttttta ctccaaatag
    25081 cttgtatcat atcaagctgc ttctttgtag cctttccact tttagcactt tcatttttaa
    25141 aatatcttgc ttttttagca ttttgctttt ttaaaaactt ctcatcataa cccaaagttt
    25201 tagcaaagtc cctaagctca tctatactta aatccttgct tgaagtttta gcatatcttt
    25261 gatttaatac ccagcgatag ctttcatcat cttctaaatt agcatctttt cttaaggtat
    25321 gtatgatttt gattaagtgc ttttttaaag tgttttgagt attcattttt tagcctttaa
    25381 aatttgctct agttttgaag tgaatttcat aactcatctc caaacaagct taattctttg
    25441 tcgttgctgt ctttattgtc agcttttaaa cttttccaaa caaaagtgcg accattttcc
    25501 ccgccaagct cactctccca aaatatgcct ttaaatttct ctaaagtatt ccttgaaaaa
    25561 ttatcacttc tgcttacatc aagagctgat aaaatctcac ttgtgcttaa gcttttttct
    25621 tttaaaagct ttaaaacctt gtctatgaaa gcttcttctt tatcactgat tttagcgttt
    25681 tgtaagtcgg tgtttttaat acttagcttt tttatattaa taaaaaaagc ttgatcttta
    25741 attcctgctc tttctttttg aacactaagt aatacttcaa aaccttgctc taaattagcc
    25801 actttttgta aaaaatacat gcaatcgctt gagtttctga tatgatttga gcctttaaaa
    25861 gctctgccat cttttgtaga gtggtgcaaa gccataatag ttgctccaca ttctcttaaa
    25921 ttcatgagca aagacatcaa agacatcatc tttgcatcat tatcaatgtc tgcaaaatta
    25981 cgcaaactat ctaatacaaa gaaaactcct tcaaaactat tagctacgcc tttactctca
    26041 atcatttcta aaagttcata agctgaagtt tttaagcttg atctatgaat ataagtgaat
    26101 ttattttcat ttaaaatgag tttgccaaaa cctctttcat ttaaaacatt taaagggttg
    26161 tccatatcaa tataaacgat gcttttaatc cttgcatctt tacaaagtgc tttagaaata
    26221 gcggcactta aataactctt cccacttccg ccatttgcgt aaatgatagt tatagctttt
    26281 ttaactaaaa agtcaggaat taaaaactct aatttttcgc ttaaatcctt attttttagc
    26341 ttaaactcat ttaaaaaatc caaattcatt ttattttcct tgttaaaact taatcaagtc
    26401 cattgatcaa tggactttgt taagctttaa tcgttttaaa ttttctttaa caattaaaat
    26461 atttttgcta attagtgcac aaacttccac acttatatca tctatatcat ttgcaacaaa
    26521 aacatcaagt aaggctgtta tattttcaag atcaagcaag cattcttcaa aagcaatttc
    26581 atccatttta tctccttctt aaacaatagt ttctaacgct tgatttagag cgatttatct
    26641 tagctgcaat agcactaaaa ttaaaacctt gatcgtatag agcataaatt tgatctatct
    26701 catcttgaca aagtggagct gtagaaactt ttttcaaatc tttattttta taaaagctta
    26761 aaagctctct ttgattttgt ataagttcat cttttaaact ttcattttca tttttaagct
    26821 tatctttgat acaattagct tgttttagat cgtttagtaa agagtaaagc tctttgctaa
    26881 attctttttg catataattg ccattttttc taatgcttgg taggacttca cgattaaccc
    26941 acattctaaa aggttttgca tttttacttc ttgaattatt catcacatag taaagttgtg
    27001 cttcatctat catggtaaat tcttttacac caaaacctgt atcaaagcta tgtgagttta
    27061 attcatacag ctcaaactcc ctttttatag tgtccgctac ttttgcaggt gttgtaagtt
    27121 ctaaaatctt acaaacatca cttaagcaaa ataaaggctc attattttca tcctttatcg
    27181 ctctaacttc taaattatct tttttaaaaa gttctaaatt cattttttat cctttatagt
    27241 tttataaatc cacacacaag ttagtataaa tactatactc atcgcaacat ctaaccacat
    27301 ttttactctc ctttggtata attgaaaaag ggtattaaga gattaaattt actaacttgc
    27361 taaggcttta aagccctagc aatcttaaaa gccaatagac agcttgtaag attaagatta
    27421 gtagttgcaa caatctaatc atcttgatac tccttttctt aatttataaa tgttaatttt
    27481 cttaacattt ataaagaaat tatacaaagt atcttattaa ttaaatctta aaaataataa
    27541 ttatatttgt gtttttagta gaattttgtt aaaaaactta acaattagat attttttaga
    27601 atagttttga tggtttccca atctttaagt tgttttttaa gctccatagt ctcttttaaa
    27661 agattaattg cagcagcggt ttgctcacta attttaccac ttgcaattgt agctcttaaa
    27721 cttggctcac tccagcccag tttttgtgct aaatctttgt aagtaaaatt attttctttg
    27781 caaaaatctt taacttcttg tgctgtcatc ttaatccttc agagtgtttt tgcaagaatt
    27841 tttttaagag ttataaagtc ttccaattcc tctttgagtt ttaaattttc taaatacaaa
    27901 ttaatagcaa atgtaagcgg ttcacttatt ttttcttgtc ttgaagcatt atttaaagca
    27961 ctttcactat acccaatctt ttctcccaat tgtttatagg taagccctaa atctttacaa
    28021 gtttttttga tgagattgtc atcatttttt gccattaatc atcctttttc ttaaaatttt
    28081 attctactaa aaacttgctt aaaagtctat aaaataggct tttaaataag tttttagagt
    28141 ggaagcgcca ctcttaattt tcaatctcca agctctcaat ctttggctct attctaaaat
    28201 tatcttttac tactctttta agtcctagtt ttaccaaggt gctatcttca agctcggcaa
    28261 tagcatcttt attaagctct tctttataag tgatgcattc attaagtcca tagcttttaa
    28321 gagctttgat taaattttca aatttttctt ttactcttgg caaagaaacg cttttactta
    28381 ggcgataacc aatcttacca aaagtaaatt ctttacttct tttttctgca aactcgtgct
    28441 tgttattttc acaaaaggtt gtaatgcatt gttctatata tttaagctca tcgcttaaaa
    28501 ctttaatttc tcctgcacga ctttctttaa tctcattgca agctaaggtt acctcgccat
    28561 taatcttttc tatctttaca ctaagttcag ccactttttt aagtgctaaa tttacatctt
    28621 ctaaattact tatttgcatt taaatctcct tttatgttct tttagcgacg gaagtaaatt
    28681 ccgcctaaag aaaccaaata ttaaaggcac gccctaaaaa tgctacgcat tttcagtcaa
    28741 aattgcctat gaaagcttat tttattaaag ctcaccattt aaccatttat caatttgata
    28801 atcccaaaga actacaccgt atcttaaaag tattgcgtgt ttagttcttt ttctaactat
    28861 ccttaagccc tttttatagg ggcaactcca aaactaattc tttaatacca agctttttag
    28921 ctaatgctaa ttcttcttgc atgccttttg aatatttagc gtctttatga ttgctcatgt
    28981 aaatataatc acttgctttt aaaagctcta atcccatttt taaagcaact tctctatgtt
    29041 tgttttcatc caaataacta aattgaagta tgggtgaaac aggtgtaaaa ccttcacatt
    29101 cacgcataat ctttaagcat tcttgctgtg ctacactaat agcctgtgct tttctttggc
    29161 tttggcttac agctaaagct ttgtaaggag ttgccacata aactaatgcc attgtttaat
    29221 cctttttatg ttcttttagc gacggaagta aattccgcct aaagaaacca aatattaaag
    29281 gcacacccta aaaatgctac gtattttcag ccaagttgcc ttaaattttg gctcacctct
    29341 tgctataaat ccctaagtta aaaacttaat cgaagtgttt taattaaaca cttctgttaa
    29401 gctttttatt taagtgaaaa tgaataattt tttgtacgat ataatcagga taaactcctt
    29461 ttaaaacatc cacaaaagca ccgctttctt taaaataaat actcgtacct tttacttcaa
    29521 ataatgaagc actataatca gccttttcgc ctttaatcat tgttgtcatt ttttctctcc
    29581 ttgcattaag ttttcttttt ttgctttttc ttttttgatt aagtcaatcg tttcaaagat
    29641 agctaaccac ttgtctttgt ttttaggact ttttaacttc ctaatggctt cagtatagat
    29701 ttgatgaacg cgtgctgtgc taagatcaag ttctttagct atctcttcga aactcatttt
    29761 taacccaaca tcaaaaatga agcggctgct tctatgtgtt taagttctac ggctttgccg
    29821 tctgcaaaat cgcaagctct ttttaaaagt ttttcgcttt ttctaaaatt gccgcgagct
    29881 aggttgaaaa tcaaatcaat agctttctta tcttctatat taaaataaga gcaaagagtt
    29941 tttaaatctt cattctttaa gccttctttg ttttgatagc aaagtccttt taattcccat
    30001 tttgcaccaa ttctagagct tagttgtccg tattcgttat aatcatttct gccaatacct
    30061 gtaagattat ttttaagttt ttttgttccc actaagatta aagctgtatt tgaaaaatca
    30121 taaatgcgtc ttaagcattc aagtgctcta aatggcaagt gctcactttc atcaatgatt
    30181 aaaacctttg aagttcttgc aagctcagcg gcaatgcctc taatcttatc atccaaagaa
    30241 cccttaaaac acacattgag cttattttca agtcctacta aaagcattct tttgctagtt
    30301 tctgtggtcg cttcaaaaag caccactctt gtgccatttt tattggcata ttctttgata
    30361 gctctgcttt ttccagtgcc tgcttcacct ataatcaccc ccatttctct attactcata
    30421 gcactttcaa tggttacgtt aattgccttt gcgtctttag tagcaataaa aggggtttga
    30481 agctctttta cgcttttttc ttctacaaag cttttaatgt atttttcaag taaaggctct
    30541 acttttgaag cgtatttata agcacttcct tctttcatat agccaaccat atagctttta
    30601 ttaatcccta aacgatcagc caagttattt tgagagatgt tttgggtgct taaaaacttt
    30661 ttagtaagtt ctactaattc cattttttat ccttttttat attcttttaa cggcgaacaa
    30721 gtccgcctaa agaaccaaat gctaaaggct tcccgaccca ttgcttcgca atgccccaga
    30781 aaaccaactt ttaccttaag ccattagtgg ctataccttt tgttttttgc taagttttta
    30841 aattttaaaa actctttaaa acttgattta atcaagcttt aaacagcttt taacctgtaa
    30901 aatatttctt ttcaacaaaa gcttccatat caaactcact ttcatcgttt gttatttctt
    30961 tttttgcatt taaaataagc tcatctgcat tggcattgtt tttgatatac tcaagctctc
    31021 tttgagtttt taaggcttct tttgcaaggg atttttgatg cacttcttta gcttctacga
    31081 gtgagttttc aaaagcactt tgtaaatctt gtaagtcttg cttgatgtta agtttggtaa
    31141 aggcggcaat ttcatctttt ttaagcactt ctttaatggc tttaacttcg ctttcataac
    31201 cttttttaag tattttatag ctctcagcac taagtttagc aatgctttca tcaagagcca
    31261 agcaaagaaa agtgccattt aaatcataaa taaaaagctc tttgatatta tcaatatttt
    31321 gcacacactt aacccttgtc cctacacttg gcattaaagc acttttataa actctacctt
    31381 caaaattaat accttttttg cctacaaccc taagttcttt atttccagcg ttaaataaaa
    31441 attcttcgta agttattttt acgatagctc tatcgcatga gttccaaagc tcaagtggag
    31501 ttttaatgcc ttttttgcgg cgaactttgc tcatgttcca tttaatcact tcagcctcta
    31561 aaaactcaca agcttcgctg aatgtgtgaa gcaatttttg attagtcttt ttggcaaagc
    31621 catattcatc tttagcacgt ctatcttttt taggagtttt ttgttctatc atttctcttt
    31681 tagctagatt attgccaata tatccatgca ttttagaaat tcctgcgtgt tgaatcgttc
    31741 caaaacgcct ttcaactaaa gctttttgtt ctcctgcgta agcaatggca gcatcataag
    31801 ttatattaag agcatcaagt aggctttgaa aatcttttga aagataatct ttaccattat
    31861 cacccttaat catatcaggc ttaccaaact tgtctatggc tttccataaa agtctagtta
    31921 ggcttaaaga atttgatttt cctactaagg tagctactcc catgccacta aagacatcaa
    31981 cgacacttaa gatatgtggg cggaaaggct cttgtgtaac atcatctctt actatgatat
    32041 cagctgggga gctatcaatt tgccaacaca tatttttcat gtcatagagt tctctttgat
    32101 tgccttgtgc agggagaaac ttactttttg ctttatctaa accttgagta ataatgcaat
    32161 gctctaaagg tttgtttttg taataatttt taatgaaatt ttgtaaagtt tttacactaa
    32221 agagcggctt tacttttccc aaatcaaaac ctataaaatc ataattttct ttaatagctg
    32281 cctctttgtg aatttgccac caaagttcag taaaattaaa accacctgcc ccaaaggtgc
    32341 gatattctct taaagcatat tcttgcatcc aaatgctaag tttagtttta tctttgcgat
    32401 gaagtccgcg agtgtcgata agcgatttaa tacaattagt cttatattta gctctccatc
    32461 ggctataggt tcgccaaggt atattgcaaa gcatcaaagc tctttttaca cttaaaccac
    32521 cttcaatata tttttctact tgctttaaag ccttaagctt ttctctagca ttgtttttaa
    32581 tttcatcact taaattttcg aattttaaat ttaaaacagt caaatcattg tttatttttg
    32641 actctgttaa atttaaatca ttctctttta taatgcaaat tgtattacta ttgttaatgt
    32701 cacttaaatc tactttttgc attttttcat taaaaattaa aatattttta ctgattaatt
    32761 cttggttaaa agcggttaaa agctgttctt tgcttatttt aaatagtagt tttttaccac
    32821 ctctaccacc tttagtatta tttactttta accactcgta tttatttgat tttctagtta
    32881 ctgcaagtct caaagcccct gcgcttacat taaaaacttg tgaagcttct ttagtttcta
    32941 ggagataaat cacgcacaaa cctcaggcaa ttcattaatg attttaagct caaaaagctt
    33001 ctcataaaca gcttttgtat tagtttttgc tttatatttt tcagagtaaa atccattaac
    33061 tacacgaaat aaactcatgt aatcaagatt atgttttttg gcaaattttt taagattaat
    33121 accattatct tcaaagtatt gttttagcaa tttacctcct ttaatttgta atttttattt
    33181 caaattgata ttttttaaga tacaatttgt aaataatttt tcaaattata agacaaaatg
    33241 cgaattaagt caagatattt tatcgcattt tgtaattttt tatataaaaa ggcttcgtta
    33301 tgtataaaac taaagacata ttgaatagag tttatagttt attaaatatt atagatgata
    33361 gaaatttttg tgagctttat aatattaaac ctaatacttt aagcacatgg aaagctagaa
    33421 atactattcc ttatgattta ttatttacaa tttcaaaaga acataatatt tctcttgatg
    33481 caatattttt tgacaaattg cgaattgata ataacaatat gcaattgaga tattatactg
    33541 atgttgcagc agcagctggg tatggtgcaa caaataatca actagagtac actgaaatta
    33601 caataagtaa aaaatttgca tatgaggcat tagatctacc aatttcaaca aagcttgata
    33661 ttataaaaat tataggcgat agcatggagc cttttgttca tagtggtgat attatagctg
    33721 tcgatataac taaaaataaa cttgaacttg ttaaaaatgg ggatattgta gtcattaatc
    33781 ttgacggaga aatttattgt aaaaaacttt tgaaacaacc ttttgtaaat gaaattgtat
    33841 taagttccat gaactccttt tacaaagata ttgtggtaag tgttgagcag attaatcatg
    33901 cagaaattat tggtgttgtt tgcaaggcaa tgacaattaa aagttttgaa aatgccatta
    33961 taaaatataa ataata
//
LOCUS       DAPWAA010000008        32467 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.008, whole genome shotgun sequence.
ACCESSION   DAPWAA010000008 DAPWAA010000000
VERSION     DAPWAA010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 32467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32467
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.008"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..1206)
                     /locus_tag="RTF91_000374"
     CDS             complement(<1..1206)
                     /locus_tag="RTF91_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ4943300.1"
                     /translation="MLNNVLPLSFIVGTRFFGLFIVLPVLSLYALKLEGANEFLVGLL
                     VGVYALTQMILQMPFGVLSDKIGRKKTMLIGLIIFIIGSLICSFAENIYTMLLGRMLQ
                     GAGAIGAVATAMISDFITEENRGKAMAVMGSFIGVSFAVSMVISPLMTVKWGLSSLFD
                     LSAALSLLCIILLYTVVPKENKIIHENEKTPFFHLIKQKNLALMNLTNFMQKMLMSIA
                     FLSIPIILVKHLGFASDKLWIVYSASMIAGFIAMGFAGSLGEKRGLAKQILLLGIIFF
                     ILSYLFFALSNSMEFFIIAVVIFFIGFNLHEPIMQSCASKFCKVHEKGAALGLFNAFG
                     YGGSFIGGIIGGIFLHLDALNLLAIILVILALIWLVALFFLKNPADFKNLYLPLETPL
                     NFTNFSQNLG"
     gene            1375..1977
                     /gene="rdgB"
                     /locus_tag="RTF91_000375"
     CDS             1375..1977
                     /gene="rdgB"
                     /locus_tag="RTF91_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HDZ4943301.1"
                     /translation="MKIILATSNKHKVLELKEILKDFEIYAFDEVLTPFEIEENGKTF
                     KENALIKAKAVFNALDKEQKKDFIALSDDSGICVDVLGGNPGIYSARFSGKGDDKSNR
                     DKLVSEMMKKGFKQSKAHYVAAIAMVGLMGEFSTHGTMYGQVIDTEKGENGFGYDSLF
                     VPKGFDKTLAELSKDEKNNISHRFKALEIAKTILKILNKG"
     gene            complement(2009..4480)
                     /locus_tag="RTF91_000376"
     CDS             complement(2009..4480)
                     /locus_tag="RTF91_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RND family transporter"
                     /protein_id="HDZ4943302.1"
                     /translation="MFAKLLKFFIFHPKSTFFGTLFICLFLSFFAFKLSVDASAESLL
                     LEDDADLKTFREISKHYKSDNFLLLAFKPHDEKPFSNENLAKLKKLHEELEQAPLVER
                     VFSIINAPLLQSSQNTDLKELLKNIPNIENQDINHTKAQNEILNSPFYKNNIISKDGK
                     VTGLIIYLKPDKIYNNLVEKRDLATNEKEKEQIRLAIKEHQDKQKIITKQSLDAIKSI
                     VQNYEKNGDTLYLGGVSIIADDMITYIKSDLVLYGVSLVFLLGLALYYFFRSWRFVFL
                     PLFICFINLSAASGVFALLNFQITVISSNYVALVLIITLSVVVHLITHFIESTQRHPK
                     AKVQRIVLETLLAKANPSLYAIVTTMIGFFSLILSNIEPIIKLGIMMSIGIGLALIFS
                     YLFLASILVLLKPKNYHKKEFKFNLLAFCAKTALNSKKRRIIYGISILAIILALLGIS
                     KLRVENSFVNYFKEGSEIKKGLLVIDKNLGGTLPLEVIIHFPNKENNQSINNPLDSFE
                     SEFENLATQETYWFDSKKTRIAKKVHEFLENKEFVGSVLSLNSLLTLGKNINDGKDLD
                     DFTLAFLNENLPAKFKQDLLSPFVSIENNELRFSMRIVDSDPNLRRNEFLIDLKKQLN
                     KLVKNDGVEVQITGIMVLYNNMLQSLFSSQFDTLIFVILAIFILFIIVFRDLKFSIAA
                     ILVNIIPLSVVFALMGLLGIPLDMMSITIAAIAIGIGVDDALHYIYRFKEEIKNKSIE
                     EAIMNSHLSIGSALYYTTISIVLGFSVMMSSNFIPTIYFGILTVFVMILLLSGSLFLL
                     PSFLVTIYSRKTKLPNQHKGHISKQ"
     gene            complement(4480..5049)
                     /locus_tag="RTF91_000377"
     CDS             complement(4480..5049)
                     /locus_tag="RTF91_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDZ4943303.1"
                     /translation="MKKICLILVLLLNAFGLQLDEISSTMQKNISASLKLLQDSKEGK
                     KQAADGIFKLFDSIIDYKLMAELSLSKNYSKLTPKEQEKFTTAFEISLKKSFTDKLSL
                     YKDQVLKVKNGELKNEKRYFLTTSMVVDGEEKNIIFKFYNDNNNWLIYDVDVLGVSIV
                     QTYRSQFGDILANQGFDALLQKLENIVIE"
     gene            complement(5059..5757)
                     /locus_tag="RTF91_000378"
     CDS             complement(5059..5757)
                     /locus_tag="RTF91_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HDZ4943304.1"
                     /translation="MKIKFVFFILIFFTIFAFAKEQNLDDFEQEYQNYQVNDPLSGYN
                     KAMTNFNVALYDYGLRPILKGYNAITPKFVRVGARNFFDNLLAPLRFLGNILQFKFKE
                     AGEEFKRFSANTIMGFGGLMDVASKMGFKKHPADLGTVLAHWGVGSGFHVVLPILGPS
                     NLRDTLALPATWYASPTAYINPTWASIAISAYGFGNELSFRLNEIDEIYHNTPNLYPF
                     LRDAYEQRRNELSK"
     gene            complement(5805..6248)
                     /locus_tag="RTF91_000379"
     CDS             complement(5805..6248)
                     /locus_tag="RTF91_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HDZ4943305.1"
                     /translation="MIFYSYEEFKKDVKILAKEIKKDFNPDALLAIARGGMSLGHSLA
                     VALKTRQLFTLNSIHYDDTKKLDTIEIFNIPNLNKHKKILLIDDIVDSGESLIEIKKV
                     LLEKFPHIELKIATIFYKKTALLEPDFKIKEATEWVDFYWDINID"
     gene            complement(6263..7582)
                     /locus_tag="RTF91_000380"
     CDS             complement(6263..7582)
                     /locus_tag="RTF91_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDZ4943306.1"
                     /translation="MDFFKLKENNTSFKTEVIAGLTTFLAMVYIIPVNSSIVGNTGMP
                     IEALITATALITIVASAFNAFFANTPVAMSVGMGLNAYFTFAVCLGQNIPWQSALGAV
                     FISSIIFLILSFTQFRLWVIRNIPKDLRLAICAGIGCFIAFLGLSQMGAIIYNKDTLV
                     SIGNFKSPHVLFGIFTLALIIFFWVIKIRGAFILGVLASSIIAWTFHLDNASFPMQIL
                     SLPNFSMENGLGAIFLQLDIKNALNITMIPIILTFFITQLFDSIGTITGVGERGKIFD
                     DPKNGEKKLSKTLMADATGSALGAITGTSTVTAFVESTTGVESGGRTGLTALVVAICF
                     AFTLFLLPLFKAIPANAIYPVLVIVGILMFMEVKNIDFQDSAIAVASFFTIIMMPFTY
                     SITTGFAFGFLSYLLVRIFKREWDKINLGIIVLSLLSLGNFLLIALQ"
     gene            complement(7592..8656)
                     /gene="mqnE"
                     /locus_tag="RTF91_000381"
     CDS             complement(7592..8656)
                     /gene="mqnE"
                     /locus_tag="RTF91_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HDZ4943307.1"
                     /translation="MKKVITKLENEERLNQEEANALWDLDLFTLGKYAHKKRTKLHGK
                     KVYFNINRHINPTNICADTCKFCAFSAHRKNPNPYLMTHEEIMQIVDETVKRETKEVH
                     IVSAHNKDTTWQWYLKIFKMIKEKYPNLHVKAMTAAEIDFLHRRFAMSYEEVIEKMLE
                     YGVDSMPGGGAEIFDEEVRKKICHGKVSSENWLKIHKLWHEKGKQSNATMLFGHIEER
                     HHRINHMLRLRDLQDQTGGFNAFIPLVWQRDNSFIQTDKIMDSEEILKTVAIARLVLD
                     NIKNIKAYWATMTLNLAMVAQEFGANDLDGTIEKESIQSAGGAKSAKGTSLKTFIDMI
                     KTSNLIPVERDSLYNELKTY"
     gene            8797..11145
                     /locus_tag="RTF91_000382"
     CDS             8797..11145
                     /locus_tag="RTF91_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HDZ4943308.1"
                     /translation="MLNKELEIFKKNLSSYTQSCRKFFLKQGAFSLYHSKNMDNFIKK
                     AYDIVLKDYFDDFSPPSDNIPFCVLASKAYANNSLCFNENISLIFVYKDIKAFHLKPI
                     IKAFIEILNDARLQIDSVILEFNGLYNASNELKTSIIQTRFICGSRILFKGIKTKFES
                     ILKENKNDFARLLLENFKEFDIPFIKQEFNILKDFGGLNHLRSLESLLVLFKASPKNY
                     ALNFIDEKNLSELRLAGDFLLSLKSAMNLLSAKDEDEFLLVNVHDLSELMHKKAKKHF
                     GANELLVQKSLQSMHTIGFYTHFLAKQIQDQLNHTLKQGYKFKTLVEVLEYLLKLEDK
                     YVIFDLNLVFVLRNLKYAKKDIEKALMLFEKIFYKRYSFCILKLLLDSGILKELCKPF
                     WAVRFLSDEEGNYSFDEQVFLMLNEFEKYEDELEILQKLKTDEKMILKLVILLSAIKS
                     ENEISLAGIYRAYCSKFDLKNEILELGLKIFKNNNALKDLVEKEDIYNPIVVSSLVSK
                     LENLENLELLYTLTWLKAKALNYNAFYFRVLDKLLENAKQGFEDENLLEESTRRVKKE
                     LTLKRSRIFLDQDEILQDKIIHIKSNLFIIKNTFEDIVMISKIARENEFKFWFSNQTN
                     LSLQIVAPLHFNIAIILSSLTNLNLIFMNFFELFDDKIYLRFEYDNIISDEQKLKLCE
                     LLNSNLSGFNLKKIKKPIIKKDELKLDLNYSKMYAKLGLNTKDQQGLMAYLMNIFNEL
                     ELVLCAAKIQTIRQRTRNIFIFQKNTKLEYNEQKLINLLISE"
     gene            11149..12945
                     /gene="glmS"
                     /locus_tag="RTF91_000383"
     CDS             11149..12945
                     /gene="glmS"
                     /locus_tag="RTF91_000383"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDZ4943309.1"
                     /translation="MCGIVGYIGNNEKKQIILNGLKELEYRGYDSAGMAVMQEGELSF
                     FKAVGKLENLANKCTDFQSQGYGFAIGHTRWATHGKPTEINAHPHLGQYSCVIHNGII
                     ENYKEIKDKLEKEGVSFLSQTDTEVIVQLFEFYVGQMEVFEAWQRTIKELRGAFATLL
                     VTKKDPNHVYFAKNAAPLIIGKNASKEWYFSSGDAPLIGNCDEVMYLEDLSLGYAGKD
                     ELVVYENDYLKQLCFSKLSGDKAYAKKDGFRFFMEKEIYEQSRVMSEVLMGRIQGDEV
                     VFDELSNENLSQANEITLCACGTSYHAAMASVYLFERIAKVKAKVEIASEFRYREAIV
                     KKDSLFIVISQSGETADTLEALKIAKEQGAKTFAICNVDNSNIVRLAHLSLLTRAGIE
                     KGVASTKAFATQVLTLWMLAIFMAQKRNLNVSAEIKALLHTPNCVSVKQALHEKIHRL
                     SKRYLDGHGFFFIGRDVFYPLALEGALKLKELSYLHAEGYPAGEMKHGPIALADSKLY
                     TIALMPKHMLYEKTKSNVEELIARDSTVLSISPLEFNLSDDFIKTNEQDHYMCEFFEM
                     MVITQLLAMEISIRLGNDVDMPRNLAKSVTVE"
     gene            12948..16067
                     /locus_tag="RTF91_000384"
     CDS             12948..16067
                     /locus_tag="RTF91_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDZ4943310.1"
                     /translation="MKKIFYLTLVSKIFALSEFELHNIDKVHKLGYSGDTIIIGVTDD
                     AFNQNHISLKDKILKSTYPTDINGKQLVPDLQKSTHGSHVAGIAVGAKIDENKPYGVA
                     YGAKFYGAGVFPEGSYTQTPDVYNFFKDVSIINNSWGISYYPHLDLRASTSGLVGCTQ
                     TLNGQNVNICQIPLTYIKQVDSVANDLYKLSLDKKLLNVFAAGNEGILTPALHATLPS
                     YDESLRAWLAVGALDANEITLEADGTLVVASKGLADFSNGFKGATNFSLVAAGADINN
                     VDSSTNNGFTKKSGTSMAAPIVSGTAALVKQKFPFLDGKQIADVLLSTANKNYKAPKF
                     TVKQVTDGTNQPKFLIVYISQDPPTVEDEIKRDLKQLYNGMQVQINGQWVDYSDYIWN
                     NRDGVQSQKLNTSTVNFINGVVRVEKEELFGQGILDAQKALKGLSILDANRLSDQDIL
                     KYEKEPDTAYYTINTAGHDAEFSNDISQRKWDESTHLSNAANKPMHLTDLNIGLAKEG
                     EGVLIISGKNTYEGATLVKQGELKLKGKLKNNAYVEKKAILSGNGIVGQDLNNKGIVR
                     PGNEDLSDLTVQGTYTQEGIDSKLQLDFGNYKNSKLIAKTYDIKGGNLEYIPLPKYYT
                     LYNPVKINLGDLGKSLSSFNNVLVQNTYALNFDFVLSNDLISINEALIKPNLKPNAYE
                     IPNTSLGNALRQLRSRTDLSQAYQEFFASLDNGIDVKTKLDRVEGSAYLSAFNNYDQS
                     NLIQNNILFTLNPLNINNFAQNNILLASTYLPRIFSDEEYFWYLTPSYKYYKDKDFSG
                     QKTGANISLGENFSSGFLAYALSLSSAKFNFNNGSDLKGYNVDLLLNYNHDLDFIKIL
                     SGLGIGVGFNTIDRFVVEPIEGKYKTLQASAQLGVTKDIILGEDFVINPLMYFTHSFF
                     YQEDFKENKSPFAKDYESLKHYSVNASLGFNLAKNIEQDDYRASFSTFAIFEKRIYGK
                     TLENKASFVDFPIGFIQKYKLKDNILSQGFNLEFLYKNNMFWQFMLMNRFSHNAYELH
                     LMSSIGKRF"
     gene            16152..17543
                     /gene="fumC"
                     /locus_tag="RTF91_000385"
     CDS             16152..17543
                     /gene="fumC"
                     /locus_tag="RTF91_000385"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDZ4943311.1"
                     /translation="MEYRIEYDTMGEIKVPNDKYWGAQTERSFENFKIGCEKMPKVLI
                     YAFANLKKSLALVNNKLGKLDDAKKNAIVQACDEIITGKFDDNFPLVIWQTGSGTQSN
                     MNMNEVIANRATEIMGGDFRKERLVHPNDHVNMSQSSNDTFPTAMSIVAVEQVEKKLI
                     PALDELIATFEKKVKEFDGIVKIGRTHLQDATPLTLAQEFSGYLSMLLHSKEQIIASL
                     PTLRELAIGGTAVGTGLNAHPELSQKVSEELTKLIGTKFVSSPNKFHALTSHDAINFT
                     HGAMKGLAANLMKIANDIRWLASGPRCGLGELIIPENEPGSSIMPGKVNPTQCEAVTM
                     VAVQVMGNDAAIGFAASQGNFELNVFKPVIIYNFLQSLDLLADSMHSFNIHCAVGIEP
                     NRAKIDHNLHNSLMLVTALNPHIGYENAAKVAKNAHKKGVSLKESAMELGLVSEEDFN
                     KFVDPTKMIGPKA"
     gene            complement(17579..18622)
                     /locus_tag="RTF91_000386"
     CDS             complement(17579..18622)
                     /locus_tag="RTF91_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDZ4943312.1"
                     /translation="MQNGKFFLISFILVILFLLLYLFKGFLLVIIIASLMAVATSNIN
                     AKFLNLTKGHKFLASILTTACMVLLFFTPFVYTMIELAKASKNFDINLVTQTLDYVKN
                     YQFTLPESFNFLYPKIKEFLASIDLNSISKQILSYASSFTKSGAKFLVDMVLICVFYF
                     FANLYGTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGTLFGLITM
                     FYGYDGILMGVIFAVSSLIPAIGGALIYVPVSLYEFASNNLNSALVIFIYSVIVISFI
                     ADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILTFFVST
                     LRMYMILKEKNLI"
     gene            complement(18626..19633)
                     /gene="ruvB"
                     /locus_tag="RTF91_000387"
     CDS             complement(18626..19633)
                     /gene="ruvB"
                     /locus_tag="RTF91_000387"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDZ4943313.1"
                     /translation="MDRIVEIEKYSFDETYETSLRPSNFNGYIGQENIKKNLNVFIAA
                     AKKRNECLDHILFSGPAGLGKTTLANIISYEMGANIKTTAAPMIEKSGDLAAILTNLS
                     EGDILFIDEIHRLSPAIEEVLYSAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTR
                     AGMLSNPLRDRFGMQFRLEFYKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPR
                     IALRLLKRVRDFADVSDEEIITEKRTNEALNSLGVNELGFDAMDLKYLELLTAAKQRP
                     IGLASIAAALSEDENTVEDVIEPYLLANGYIERTAKGRIASTKSYNALKLNYEKTLFE
                     E"
     gene            19726..20136
                     /locus_tag="RTF91_000388"
     CDS             19726..20136
                     /locus_tag="RTF91_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase"
                     /protein_id="HDZ4943314.1"
                     /translation="MGILTKLELDYEIDDIEKFLQFFRTMCDRFEPLIIKLGSDSVRY
                     KEAVKELETLAHNTAWAARRLNLEEVTDFCVFCEEMMAQANRFNGPASDEFTDWMLLM
                     SDQFEKYCRSYENDDSVLAVFNPLIVNVPNIISK"
     gene            20137..20495
                     /gene="ssrA"
                     /locus_tag="RTF91_000389"
     tmRNA           20137..20495
                     /gene="ssrA"
                     /locus_tag="RTF91_000389"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(20569..22653)
                     /locus_tag="RTF91_000390"
     CDS             complement(20569..22653)
                     /locus_tag="RTF91_000390"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HDZ4943315.1"
                     /translation="MQTSPDMFINRELSWLRFNSRVLDQCSKNLPLLEKLKFIAIYCT
                     NLDEFYMIRVAGLKQLFSAGVNASSSDEMTPLQQLKAIRKYLHQEKKLLEHYFNEITN
                     ELEKENLFIKHYENLDENFKQKCDEYFFSNIFPVIVPIAVDATHPFPHLNNLSFSLAV
                     KICDKAHPELVKFGMIRIPRVLPRFYEVSANIYVPIENIVHQHAEEIFPGYKLLASAA
                     FRVTRNADMVIEEEEADDFMMILEQGLKLRRKGAFVRLQIQKDADEQIVEFLNTHMKI
                     FHKDIYEYSILLNLSSLWQIAGNKTFTHLLSPLYTPKTLPPFDENLSIFDAVEKEDIL
                     IIQPFESFDPVYKFIKEASKDPEVISIRMTLYRVEKNSNIVQALIDAASDGKQVTVMV
                     ELKARFDEENNLHWAKALENSGAHVIYGITGFKVHAKVSQVIRKQGDKLKFYMHLSTG
                     NYNASSAKIYTDTSYFTSKAEFARDTTSFFHILSGFSKNRRLQTLSMSPNQIKEKVLE
                     MIRIETIKKNEGVIVAKMNSLVDNNIIQALYEASIEGVQIDLIIRGICCLKPNEEYSK
                     NIRVRSIIGKYLEHARVFYFKHSDPNYFISSADWMPRNLERRLELMTPIYDERSKAKL
                     AQFLRLQLSDNVLAYELKNNGEYEKIPSSEKTIDSQQTLEEYVSKIYKTLKKDTDQSR
                     ATHLASKLFKEN"
     gene            22840..23355
                     /gene="nrfH"
                     /locus_tag="RTF91_000391"
     CDS             22840..23355
                     /gene="nrfH"
                     /locus_tag="RTF91_000391"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HDZ4943316.1"
                     /translation="MIILRRKILKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLS
                     NTSESCNNCHIMNEVYNEYMAGLHSQKVKGEPRATCVDCHLPHNFVAKWIAKAQSGLG
                     HAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
                     CHKDVGHKHGI"
     gene            23370..25202
                     /locus_tag="RTF91_000392"
     CDS             23370..25202
                     /locus_tag="RTF91_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HDZ4943317.1"
                     /translation="MKKNILRLGIVVLVLFIGEVLWLNNDINQKKEDEANKNAIAANA
                     DFSLLSDDNPNFEKWGKVFPEQLKMYLMVEKEEPKATEFGGNLAYSKLIRFPQLIIFW
                     AGYPFSLDANEERGHFWIQVDQMKTARNNKDFLNAHGFAAFKGQPAACMNCHSGWTPW
                     LIKNVAKGDFIAFNSTNYWTMIKNIPAVDGIVENSPEHAGPHGGKRMGVTCADCHNPN
                     DMSLRLTRPAAINALVSRGYEKDLVQGVKATREEMRTLVCSQCHVEYYFKPTGEKVKV
                     MGETIADDSSKKWWNGTQKNYDEYEFWRDGNKAKEIETDGIILTFPWSEWKKGQPFRI
                     EMLDDYYDKIRGVFGADFTHKLTGAQIIKIQHPESELYSGGVHAANGVSCVDCHMPYV
                     REGAKKITQHNITSPLRDINSACKSCHKQSEDYLKAQVFDIQNSVAHDQRTAEYAIVS
                     LIMDTKKLRDELGNMEKFQTDEKADAKKISEELKEVLELHRKAQMRADFVNAENSTGF
                     HNPREASRMLLQAVDMARMGQTKLVEIAAANGIKDFKTSNLGFEDIQKFNPGEIYYKV
                     DVDGHKAGERYYADEKDVNGNPPKELLEYDKELAPYNYQVIDTK"
     gene            25336..25890
                     /locus_tag="RTF91_000393"
     CDS             25336..25890
                     /locus_tag="RTF91_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943318.1"
                     /translation="MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYILGANQDVGLK
                     VEQYRLSKVIENGKEREALIQYLKENSLKVPSNTNIIKSKDKGVTIGGAHYSANIAQN
                     STNEYYITLKTRSLLGDMIMLHKDKGAWYFSVLSVGFGIALFMLYTSGLMIALFANKK
                     DRSKQFAVLGMGVIVTLLLAYLSL"
     gene            25952..26041
                     /locus_tag="RTF91_000394"
     tRNA            25952..26041
                     /locus_tag="RTF91_000394"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:25986..25988,aa:Ser,seq:gct)
     gene            complement(26097..26279)
                     /locus_tag="RTF91_000395"
     CDS             complement(26097..26279)
                     /locus_tag="RTF91_000395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943319.1"
                     /translation="MQIIQTYRFLLDLEEIANFISLGSIKQANLFLDNLEKSLENLYP
                     VMIKIYRDLIFKVYVK"
     gene            complement(26358..26501)
                     /locus_tag="RTF91_000396"
     CDS             complement(26358..26501)
                     /locus_tag="RTF91_000396"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943320.1"
                     /translation="MNLEFSKETQHFLTNYCKDNNLSEKEVLELDLSYLEHKIRINGY
                     KKM"
     gene            complement(26620..27600)
                     /locus_tag="RTF91_000397"
     CDS             complement(26620..27600)
                     /locus_tag="RTF91_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HDZ4943321.1"
                     /translation="MKKSLFFAFFASLILIACNSNSNENNASSTTKTSATVKVVPISI
                     SDEGNSFLVKDSLGENKIPKNPSKVVILDFGILDTFDALKLNDKVAGVPAKNLPKYLQ
                     QFKNKPSVGGVQQVDFEAISALKPDLIIISGRQSKFYDKLKEIAPTLFVGLDSANFLS
                     SFENNVLSVAKLYDLEKEASVKIADIKNEIEKAKSIVDEDKKALIVLTNSNKISAFGP
                     QSRFGIIHDVLGINAIDENIKVGTHGKSINSEFILEKNPDYIFVIDRNVIVGNKERAQ
                     GILDNPLVAKTKAAQNKKIIYLDPEYWYLANGNGLESLKTMILEIKNAVK"
     gene            complement(27613..28368)
                     /locus_tag="RTF91_000398"
     CDS             complement(27613..28368)
                     /locus_tag="RTF91_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943322.1"
                     /translation="MIKLKNITKFYDNKAIISDLSLDFHKGKITSIIGANGAGKSTLL
                     ALASRLIKPSSGKIYIDGMNLKDYKEQILAQKISILKQQNNINLRLKVEELVAFGRFP
                     HSQGRLNVNDKIKINEALEYMGLSNLRNEFLDTLSGGQKQRAFIAMIIAQDTEFIMFD
                     EPLNNLDMKHSVQIMQLMKNLVKDFNKSIAVVLHDINFASFYSDEIIALKDGKLLKQG
                     LKDEVINQEILKQIYDMDIPVSQIDGKKICIYF"
     gene            complement(28365..29303)
                     /locus_tag="RTF91_000399"
     CDS             complement(28365..29303)
                     /locus_tag="RTF91_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDZ4943323.1"
                     /translation="MRKQILILSFSTLIMMGIFMLVGLNNFDEYALKSRFLQIAAIII
                     VAICIAVSTVIFQTLCNNKILTPAIIGLDSLYMLLQSALIFSFGAANLSVYKNDINFL
                     ITLVCMIVFSLGLYKILFSNDRSIYLIMLLGLIFGTLFSTLSSFFEVLIDPDEFMVIQ
                     GRMFASFDNIAFDVLVLAYIITFLSFIWIFPYIKFLDPLNLGKDLAINLGISYQKISK
                     QLMIIIAILTSISTALVGPITFLGLLVVNITYELFKTAKHSILLSACILINILALLGG
                     VFFVSRVFDHNTTISVIINFLGGIYFIYLVLKGNKL"
     gene            complement(29296..30264)
                     /locus_tag="RTF91_000400"
     CDS             complement(29296..30264)
                     /locus_tag="RTF91_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ4943324.1"
                     /translation="MFFKHILNLKVLIALLLFFGVISLFIGVISINVEDIFNLSSTQL
                     EIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKFVSPTTAGTMDCARFGILISLIF
                     FTGASFLTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
                     YILNYIQNIQGWLQGSMTNVMQGNYELLYISLPLFMLAYFLAHKITIVGMGEDIALNL
                     GISYNGILFLGLMIISVITSMVIVSVGVIPFLGLIIPNLVALYLGDNLRKNLIHIAFC
                     GALFLLICDIISRLIIFPFEMPLSITTGILGSLVFIFLLLKRKAYA"
     gene            complement(30351..31340)
                     /locus_tag="RTF91_000401"
     CDS             complement(30351..31340)
                     /locus_tag="RTF91_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HDZ4943325.1"
                     /translation="MRKIVLFLSLCVFTWASDLQKALEYEKQGDYKKAMEIYKKLALK
                     NSPVLISQEQNNSSQSTQTQNSIIAKKEEKQDFSHLALANYLGKDENFNPLGISSYKM
                     NYFLPFTYSFNSLGAKNRKSEAKFQLSVKKRLFENLLGLDEKYYIAYTQTSWWQIYKH
                     SSPFRESNYQPEFFVDFPLYFKDYKFFNNLRLGILHESNGKGDENLQSRSWNRIYVST
                     AILYNKFLFVPRLWYRIPESKKDDDNPAILHYMGNFDVNLAYLGNDYFINLMLRNNLK
                     FHDNKAAIQVDLGYDIFNNGIYWYLQYFNGYGESLIDYNKHLQRLSTGFLISY"
     gene            complement(31337..31912)
                     /locus_tag="RTF91_000402"
     CDS             complement(31337..31912)
                     /locus_tag="RTF91_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDZ4943326.1"
                     /translation="MQLNELNCVILCGGKSSRMGQDKSKLILKNQNLTQFQVDKFSKI
                     FKNVYVSVKEDKFENHFSLIKDSSEFEVYSPMLALYSILSNFKNEFVFVLSVDSPKVG
                     ENELLKMLPFLEQNYKIIIAKTPLHKHPLCGFYHSSLAQTCKKFLEKDAQKIGLLFSE
                     IKTKFVEFEDEDAFLNLNFYEEYEKFQSELK"
     gene            31974..>32467
                     /locus_tag="RTF91_000403"
     CDS             31974..>32467
                     /locus_tag="RTF91_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HDZ4943327.1"
                     /translation="MKYTELLQLQTFFSQFKKIDFIKRINDNILELSFDKQRFIFDLT
                     RGMSAIYTAKLNVKNYNAPFDFMLKKYFSNAFIKEVKVLKDNRILYFSVKANKAYKSY
                     KSKIYFEFTGKNTNVIVTDEKDLIMEALRHIDKSYRVVKPNVILKPLKPYKMDENFEE
                     IKDF"
BASE COUNT        11469 a         4559 c         5201 g        11238 t
ORIGIN      
        1 tcctaaattt tgactaaaat tcgtgaaatt taaaggtgtt tctaagggta gataaaggtt
       61 tttaaaatca gctggatttt ttaagaaaaa taaagccaca agccaaatta gggctaaaat
      121 taccaaaatt atagctaaaa gatttaaggc atctaggtgt aaaaatatcc ctccgataat
      181 accacctata aaacttccac catatccaaa agcattaaac aatcctaacg ctgcaccttt
      241 ttcatgaact ttgcaaaatt ttgatgcaca gctttgcatg atgggttcgt gtaaattaaa
      301 acctatgaaa aaaatcacaa ccgctataat aaaaaattcc atagaattgc taagagcaaa
      361 gaaaagataa gaaagtatga aaaaaataat tcctaaaagt aaaatttgct ttgctaagcc
      421 tcttttttca cctaaacttc cagcaaaacc catagcgata aaacccgcta tcatagaagc
      481 actataaaca atccaaagtt tatcagaagc aaaacctaag tgttttacta aaataatagg
      541 aatacttaaa aacgctatac tcataagcat tttttgcatg aaattagtaa gattcataag
      601 ggctaaattt ttttgtttaa taagatgaaa aaaaggagtt ttttcatttt catgaatgat
      661 cttattttct ttaggtacaa cggtataaag tagaattata cataaaagag acaaagccgc
      721 actaagatca aaaaggctag ataagcccca ttttacagtc attaaaggag aaattaccat
      781 ggagactgca aaactaactc ctataaaaga acccattact gccatagctt taccacgatt
      841 ttcttctgtg ataaaatcac ttatcattgc tgtagctact gccccgatag ctcctgctcc
      901 ttgaagcatt ctccctaaaa gcatagtata gatattttct gcaaaagagc aaatcaaaga
      961 gcctattata aaaataataa gtccaatgag catggttttt ttgcgaccaa ttttatcgct
     1021 taaaacccca aaaggcattt gtaaaatcat ttgagttaag gcataaacac cgactaaaag
     1081 tccaactaaa aattcattag ccccttcaag ttttaaagca taaagactca aaacaggtaa
     1141 aacgataaaa agcccaaaaa atcttgttcc aactatgaaa gataagggta aaacattatt
     1201 tagcattatc aatttcctaa tttaaatttt gaaatttaaa gtaggataat tttactatga
     1261 aatggattaa gcattgatta atatcggttt atcttcggta tttaaaagct acgtacaagg
     1321 ataaatttta taaaatcata tttttgtttt tgatattatt ttggggtttt tgttatgaaa
     1381 attatcctag ctacgagtaa taaacataaa gttttagaac ttaaagaaat tttaaaagat
     1441 tttgaaattt atgcctttga tgaagtttta acgccttttg aaattgaaga aaatggaaaa
     1501 acttttaaag aaaatgcatt gattaaagca aaagcggttt ttaatgcttt agataaagag
     1561 caaaaaaaag attttattgc tttaagtgat gatagcggta tttgtgtaga tgttttaggc
     1621 ggaaatccag gaatttattc tgcacgcttt agtggtaaag gcgatgataa aagcaaccgt
     1681 gataaacttg taagtgaaat gatgaaaaaa ggttttaagc agagtaaagc gcattatgtt
     1741 gctgctattg ctatggtggg tttaatgggg gaatttagca cgcatggaac tatgtatgga
     1801 caagtgattg atacagaaaa aggtgaaaat ggttttggct atgatagtct ttttgttcca
     1861 aaaggttttg ataagacttt agccgagctt agtaaggatg agaaaaataa tatttcccat
     1921 cgttttaaag ctttagagat tgcaaaaacc attttaaaga ttttaaataa aggataataa
     1981 atgaaaaatt ttttaaaata tatagctatt attgttttga tatatgccct ttatgttggt
     2041 ttggaagctt ggttttccta gaataaatag tgactaaaaa gcttggtaat aaaaataaac
     2101 ttccacttaa aagcaaaatc attacaaaaa cggttaaaat tccaaaataa attgtcggaa
     2161 tgaaattact actcatcata acactaaaac ctaaaactat actaatggta gtataataaa
     2221 gtgccgaacc tatactaaga tgcgaattca taatagcttc ttctatgctt ttatttttaa
     2281 tttcttcttt aaaacgataa atataatgta aggcatcatc aacgcctata cctatagcaa
     2341 tagcagctat agtaatactc atcatatcta aaggaatgcc taaaagtccc atgagagcaa
     2401 agactacgct taaaggaatg atatttacta gtatagcggc aattgaaaat tttaaatctc
     2461 taaaaacaat gataaaaagt atgaaaatag ctaaaattac aaatataagt gtatcaaact
     2521 gcgatgaaaa aaggctttgg agcatattgt tataaagcac cattatacct gtgatttgaa
     2581 cttctactcc atcatttttt acaagtttat tgagctgttt tttaagatct attaaaaact
     2641 cattgcgtct taaatttgga tcagaatcaa caatacgcat actaaatctt aattcgttat
     2701 tttctatgct tacaaaaggt gagagtaaat cttgtttaaa tttagcaggt aaattttcgt
     2761 ttaaaaatgc aagggtaaaa tcatctaaat ctttcccatc attgatattt tttcctaaag
     2821 ttaaaaggct attaaggctt aaaactgaac ctacaaattc tttattttct aaaaattcat
     2881 gaactttttt cgcaatacgc gtttttttag aatcaaacca ataagtttct tgtgtggcta
     2941 aattttcaaa ttcgctttca aaactatcaa gagggttgtt tatgctttga ttgttttctt
     3001 tatttggaaa gtgaatgatt acttctaaag gtaaagttcc acctagattt ttatcaataa
     3061 ccaataaacc ttttttaatt tcactgccct ctttaaaata attcacaaaa gaattttcaa
     3121 ctctaagttt tgaaatgcct aataaagcta agatgatggc aagaattgaa attccataaa
     3181 taatgcgacg ctttttagaa ttaagagcgg ttttggcaca aaaagctaaa agattaaatt
     3241 taaattcttt tttatgataa ttttttggtt ttaaaagaac taagatactt gctaaaaata
     3301 aataactaaa aataagagct aaacctatac ctatactcat cataatacca agttttatga
     3361 taggctcgat atttgaaagg attaaagaaa aaaatcctat catggttgta acaatagcat
     3421 aaagactagg gtttgcttta gctaataagg tttcaagcac tatgcgttga accttagctt
     3481 tggggtgacg ttgagtgctt tcgataaaat gtgtgatcaa atgaacaact acgctcaaag
     3541 tgatgattaa aaccaaagca acataatttg atgaaatgac ggtgatttga aaatttaaaa
     3601 gtgcaaaaac tccactggct gcacttaagt ttataaaaca aataaaaaga ggtaaaaaaa
     3661 caaaacgcca cgaacggaaa aaataataaa gtgcaagtcc tagtaaaaat acaagagaaa
     3721 caccataaag tacaagatca gattttatat aagttatcat atcatcagca attatactta
     3781 cgccaccaag gtaaagcgta tctccgtttt tttcataatt ttgaactatg cttttaatag
     3841 catccaagct ttgttttgta ataatttttt gcttatcttg atgttccttt atagcaaggc
     3901 gaatttgttc tttttctttt tcattggtag caagatcgcg tttttctaca agattattat
     3961 aaattttatc aggctttaag taaataataa gccctgttac ttttccatct tttgagatga
     4021 tattattttt ataaaatggg ctatttaaaa tttcattttg ggctttggta tggtttatat
     4081 cttgattttc tatgtttggg atatttttta aaagttcttt taaatctgta ttttgcgaac
     4141 tttgaagtaa aggggcattg atgatgctaa aaacgcgttc tactaaagga gcttgttcta
     4201 attcttcatg aagttttttt aacttagcta aattttcgtt tgagaagggt ttttcatcat
     4261 ggggtttgaa ggctaaaagt aaaaaattat cacttttata atgctttgaa atttctctaa
     4321 aagtttttaa gtccgcatca tcttctagca gtaagctttc agcacttgca tctacgctaa
     4381 gtttaaaagc aaaaaagctt aaaaacagac atataaataa agttccaaaa aaagtacttt
     4441 ttggatgaaa aataaaaaac tttaaaagct ttgcaaacat tattctataa caatattttc
     4501 aagtttttga agtagggcgt caaagccttg attggctaaa atatctccaa attgtgacct
     4561 ataagtttgc actatactaa cacctaaaac atctacatca taaataagcc agttgttatt
     4621 atcattgtaa aatttaaaaa tgatattttt ttcttcccca tctaccacca tagaagtggt
     4681 taagaaatag cgtttttcat tttttaactc gccatttttg acttttaaaa cttgatcttt
     4741 gtaaagacta agtttatcgg taaaactttt tttaagactt atttcaaagg ctgtggtaaa
     4801 tttttcttgt tctttcgggg ttaatttaga ataatttttt gaaagactaa gttctgccat
     4861 gagtttataa tcaattatac tgtcaaaaag tttgaaaatt ccatcagcag cttgtttttt
     4921 accttctttg ctatcttgta aaagttttaa acttgcacta atgttttttt gcatagtgct
     4981 agaaatttca tctagttgta agccaaaagc atttaacaat aagactaaaa ttaagcatat
     5041 ttttttcata attttccttt atttactaag ttcattgcgt ctttgttcat aagcatcacg
     5101 caagaatgga tataaattgg gtgtattgtg ataaatttca tcgatttcat tgagtctaaa
     5161 actaagttca ttgccaaatc cataagcact tatagctata cttgcccaag taggattaat
     5221 gtaagctgtt ggacttgcat accaagttgc aggcaaagca agagtatctc ttagattgct
     5281 agggccaagt ataggtaaga caacatgaaa accacttcct actccccagt gagctaaaac
     5341 ggttcctaga tccgcaggat gttttttaaa ccccattttt gatgccacat ccataagtcc
     5401 accaaaaccc ataatggtat tggcactaaa tcttttaaat tcttctcctg cttctttaaa
     5461 tttaaattgt aaaatattgc ctaaaaaacg caaaggggca agtaaattgt caaagaaatt
     5521 ccttgccccc actcttacaa atttaggagt gatggcattg taacccttaa gtataggacg
     5581 caaaccataa tcatataaag ccacattaaa atttgtcata gctttgttat atcctgaaag
     5641 cgggtcgttt acttgataat tttggtattc ttgttcaaaa tcatctaaat tttgttcttt
     5701 ggcaaaagca aaaatagtaa aaaaaattaa aataaaaaat acaaatttta ttttcaaaca
     5761 agaactccta aaaattttaa aaagtaaaat tatagcaaat atttttaatc aatatttata
     5821 tcccagtaaa aatccaccca ttctgtagct tcttttattt taaaatcagg ttctaaaaga
     5881 gcggtttttt tataaaaaat cgttgcgatt ttaagctcaa tatgaggaaa tttttcaagc
     5941 aaaacttttt ttatttcaat taagctttcc ccgctatcta ctatatcatc aatgagtaga
     6001 atttttttat gtttattaag attaggaatg ttgaaaattt caatagtatc aagttttttt
     6061 gtatcatcat aatgaatgga atttaaagta aaaagttgac gcgtttttaa agctactgct
     6121 aaagagtgtc ctaagctcat tcctcctctt gctatggcca aaagtgcatc aggattaaag
     6181 tcttttttaa tttctttagc aagaattttt acatcttttt taaattcttc ataggaataa
     6241 aatatcatta gtgtatcctt atttattgta gtgcgataag taaaaaatta cccaaagata
     6301 ataaactcaa aactatgata ccaagattga ttttatccca ctcgcgttta aaaattctta
     6361 caagcaaata agaaagaaat ccaaaagcaa aacctgtagt gattgagtag gtaaaaggca
     6421 tcataatgat agtaaaaaaa cttgctacag ctatggcgct atcttgaaaa tctatatttt
     6481 tgacttccat aaacattaaa attccaacta ttacaagtac aggataaata gcattagcag
     6541 gaatggcttt aaaaagtggt aataaaaaaa gtgtaaaggc aaagcaaatg gctacaacta
     6601 aagccgtaag tccggttcta cccccgcttt caactcctgt ggtgctttca acaaaagcag
     6661 taaccgtaga agttcctgtt atcgctccta aagccgatcc tgttgcatct gccattaagg
     6721 ttttacttag ttttttttct ccattttttg gatcgtcaaa aatctttcct ctttcaccca
     6781 cgcccgtgat agttcctatg ctatcaaaaa gttgagtgat aaaaaaagtt aaaattatag
     6841 gtatcatagt aatatttaag gcatttttta tatcaagttg taaaaagata gctcctaaac
     6901 cattttccat gctaaaattt ggtaaagaaa gaatttgcat aggaaaactt gcgttatcta
     6961 aatgaaaagt ccaagcgata atagagcttg ctaatacccc taaaataaaa gctccacgaa
     7021 tttttataac ccaaaaaaag atgattaaag ctagggtaaa aattccaaaa agcacatgag
     7081 ggcttttgaa atttcctata ctgactaaag tatctttatt gtatattatt gcgcccattt
     7141 gacttaaacc taaaaatgca ataaaacaac ctatacccgc acaaattgca aggcgtaaat
     7201 ctttggggat attgcggatt acccaaagac gaaattgggt gaaagaaagt atgagaaaaa
     7261 taatacttga gataaaaaca gctcctaagg cgctttgcca aggtatgttt tggcctaaac
     7321 aaactgcaaa ggtaaaataa gcatttaaac ccattccaac actcatagcc acaggagtgt
     7381 tggcaaaaaa agcattaaaa gcacttgcaa ctatggtgat taaagctgtt gcagtaataa
     7441 gtgcttctat aggcattccc gtattcccta ctatactaga atttacagga atgatataaa
     7501 ccatagctaa aaatgtggta agtccagcta taacttcggt tttaaaactc gtattgtttt
     7561 ctttgagttt aaaaaaatcc atctattctc cttagtaggt ttttagttca ttataaagac
     7621 tatcgcgttc cacaggaata agatttgaag tttttatcat atcgataaag gtttttaaac
     7681 tcgtcccttt agcagatttt gcaccacctg cactttgtat actttctttt tctatagtgc
     7741 catctaaatc atttgcacca aattcttgtg ctaccatagc taaatttaaa gtcattgttg
     7801 cccaataagc tttgatattt ttaatattat caagcaccaa acgagctatg gctacagttt
     7861 ttaaaatttc ttcgctatcc atgattttat cagtttgtat aaagctatta tctctttgcc
     7921 aaactagagg gataaaggca ttaaatccac ctgtttgatc ttgaagatca cgtaatctta
     7981 gcatatgatt gattctatga tgcctttctt ctatgtgccc aaaaagcatg gtagcattgc
     8041 tttgcttgcc tttttcgtgc caaagtttat ggatcttaag ccaattttca ctgctaactt
     8101 tcccatgaca aattttttta cgtacttctt cgtcaaaaat ttcagccccg ccacctggca
     8161 tagaatcaac gccatattcg agcatttttt ctatcacttc ttcatagctc atagcaaaac
     8221 gacgatgtaa aaaatcaatt tcagctgctg tcatagcttt tacatgaaga ttaggatatt
     8281 tttcttttat cattttaaaa atttttaaat accattgcca agttgtatct ttattatgag
     8341 ccgaaacaat atgtacttct ttagtttcac gttttacagt ttcatcgaca atttgcataa
     8401 tttcttcatg agtcattaaa taaggattag gattttttcg gtgtgctgaa aaggcgcaaa
     8461 atttacaagt atctgcacag atattggttg gattgatatg gcgattgata ttaaaataaa
     8521 ctttttttcc atgaagtttc gtgcgttttt tgtgagcgta tttgcccaag gtaaaaagat
     8581 ctaaatccca aagtgcattt gcttcttctt ggtttaatct ctcttcgttt tctagcttgg
     8641 tgattacttt tttcatttga ttttactctt ttgttgtttt taaatagagc attataattt
     8701 ttgcttactg aaaaagagtt tatagaaaaa gccaaaataa aagatatttt tgttaagatt
     8761 attattaaaa tattaaaata aaagagagta aaaattttgt taaataaaga attggaaatt
     8821 tttaaaaaaa atcttagctc ctatactcaa agttgtagaa aattttttct taaacaaggg
     8881 gcgtttagct tatatcattc caaaaatatg gataatttca taaaaaaagc ttatgatata
     8941 gttcttaaag attattttga tgatttttca cctccaagtg ataatatccc tttttgtgtt
     9001 ttagcaagca aggcatatgc aaataatagt ctttgtttta atgaaaatat ttctttgatt
     9061 tttgtttata aagatattaa agcttttcat ttaaagccta taatcaaggc ttttatcgaa
     9121 attttaaatg atgcgcgttt gcaaattgat tctgttatct tagaatttaa tgggctttat
     9181 aatgctagca atgagcttaa gacttctata atacaaaccc gttttatatg tggatctagg
     9241 attttattta aagggattaa gacaaaattc gaaagtattt taaaagaaaa taaaaatgat
     9301 tttgctaggc ttttgctaga aaattttaaa gaatttgata ttccatttat aaagcaagaa
     9361 tttaatattt taaaagattt tggcgggtta aatcatttaa gatccttaga gagtttgctt
     9421 gttcttttta aagcttctcc aaaaaattat gctttaaatt ttatagatga aaaaaattta
     9481 agtgagttgc gtttagctgg agatttttta ctttctttga aatcagcgat gaatttatta
     9541 agtgctaaag atgaagatga atttttgctt gtcaatgttc atgatttgag tgaattaatg
     9601 cataaaaaag ctaaaaagca ttttggagca aatgagttat tagttcaaaa atctttgcaa
     9661 agcatgcata ctataggttt ttatacccat tttttagcaa aacaaattca agatcaatta
     9721 aatcataccc ttaaacaagg atataaattt aaaacccttg tagaagtttt agaatactta
     9781 ttaaagcttg aagataaata tgttattttt gatcttaact tggtttttgt attaagaaat
     9841 ttaaaatacg ctaaaaaaga catagaaaaa gctttaatgc tttttgagaa gattttttac
     9901 aaaaggtata gtttttgtat tttaaaactt ttgcttgata gtggaatttt aaaagagttg
     9961 tgtaagcctt tttgggcggt tcgtttttta agtgatgaag aaggaaatta tagttttgat
    10021 gagcaagttt ttcttatgtt gaatgaattc gaaaaatacg aagatgagct tgagatactc
    10081 caaaaattga aaaccgatga aaaaatgatt ttaaagcttg taatactttt aagtgctata
    10141 aaaagtgaaa atgaaatttc cttagcaggt atatacagag cgtattgttc caaatttgat
    10201 ttaaaaaatg aaattttaga attaggcctt aaaatattta aaaacaataa tgctttaaaa
    10261 gatcttgtgg aaaaagaaga tatatacaat cctattgttg taagtagttt agtttctaaa
    10321 ctagaaaatt tggaaaattt agaactttta tatactctaa cttggttaaa ggctaaggct
    10381 ttaaattaca atgcttttta ttttagagtt cttgataaac ttttagaaaa tgcaaaacaa
    10441 ggttttgaag atgaaaatct acttgaagag agtacaagaa gagtaaaaaa agaattaaca
    10501 cttaaaagaa gtagaatttt tttagatcaa gatgaaattt tacaagataa aatcatacat
    10561 ataaaatcaa atctttttat tataaaaaat actttcgaag atattgttat gatttctaaa
    10621 atagctagag agaatgaatt taaattttgg tttagcaatc aaacaaatct tagtttgcag
    10681 attgttgcac ctcttcattt taatatagcc attattttaa gctctttaac aaatttaaat
    10741 cttattttta tgaatttttt tgaacttttt gatgataaaa tttatttaag atttgaatat
    10801 gataatatta ttagtgatga gcaaaagcta aaactttgtg agcttttaaa ttcaaatctt
    10861 tctggtttta atttgaaaaa aattaaaaag ccaatcatta aaaaagatga gctaaaatta
    10921 gacttaaatt attctaaaat gtatgccaaa ttaggtctta acactaaaga tcagcaaggt
    10981 ttaatggcat atttaatgaa tatttttaat gaacttgaac ttgtcttatg tgcagcaaaa
    11041 attcaaacca taagacaaag aacgcgtaat atttttattt ttcaaaaaaa tactaaatta
    11101 gaatataacg agcaaaagtt aattaattta ttaataagtg agtaaaaaat gtgtggaatt
    11161 gtaggctata taggaaataa tgaaaaaaaa caaattatat taaatgggct taaagaatta
    11221 gaatatcgtg gttatgatag tgcgggtatg gctgtgatgc aagaaggaga gcttagtttt
    11281 ttcaaagccg tgggaaagct tgaaaatttg gctaataaat gcacagattt tcaaagtcaa
    11341 ggttatggtt ttgctatagg tcatacaaga tgggcaactc atggtaaacc tactgaaatc
    11401 aatgcacacc ctcatttagg gcagtattct tgtgtgattc acaatggtat catagaaaac
    11461 tataaagaga ttaaggataa acttgaaaaa gagggtgtga gttttttaag tcaaactgat
    11521 acagaggtta ttgttcagct ttttgaattt tatgttgggc aaatggaagt ttttgaagct
    11581 tggcaaagaa ctattaaaga actccgtggc gcttttgcta ctttgttggt aacaaaaaaa
    11641 gatccaaatc atgtatattt tgctaaaaat gctgctcctt tgatcatcgg taaaaatgca
    11701 agtaaagaat ggtatttttc ttcaggtgat gcacctttga taggaaattg tgatgaggta
    11761 atgtatcttg aagatttaag cttaggatat gcaggtaaag atgagcttgt agtttatgaa
    11821 aatgattatt taaaacaact ttgtttttct aagctttcag gtgataaggc ttatgcaaaa
    11881 aaagatggtt ttcgtttttt tatggaaaaa gaaatttatg agcaaagccg tgtgatgagt
    11941 gaagttttaa tggggcgtat tcaaggtgat gaagtcgttt ttgatgaact tagcaatgaa
    12001 aatttaagcc aagcaaatga aattacactt tgtgcttgtg ggacgagcta tcatgctgca
    12061 atggcaagtg tttatttgtt tgaaagaatt gctaaggtta aagccaaagt ggaaattgca
    12121 agtgaatttc gctaccgtga agcgatcgta aaaaaagatt ctttatttat tgttatttct
    12181 caaagtggag aaacggcaga tactttagaa gctttaaaaa ttgcaaaaga acagggtgct
    12241 aaaacttttg caatttgcaa tgtagataat tctaatatag tgcgtttagc acacttaagt
    12301 cttttaactc gtgcgggcat agaaaaaggg gtggcttcaa ctaaagcttt tgcaactcaa
    12361 gttttaacgc tttggatgct tgctattttt atggcacaaa aaagaaattt aaatgtttcg
    12421 gctgaaatta aagcactttt acatactcca aattgtgtga gtgtaaaaca agctttgcat
    12481 gaaaaaattc accgtctatc taagcgttat ttagatggtc atggcttttt ctttataggt
    12541 agagatgtgt tttatccttt ggctttagaa ggggctttaa aacttaaaga attgtcttat
    12601 ttacacgctg aaggttatcc tgcgggagaa atgaaacatg gacctattgc attggctgat
    12661 tctaaacttt atacgatagc tttaatgcca aaacacatgc tttatgaaaa aacaaaatca
    12721 aatgttgaag agcttatagc tagagattct acggtactta gtatttcacc tttggaattt
    12781 aatttgagtg atgattttat aaaaaccaat gagcaagatc attatatgtg tgaatttttt
    12841 gaaatgatgg taattactca gcttttagct atggaaattt ccataagact tggtaatgat
    12901 gtggatatgc cacgaaattt agctaaaagt gtaacagtgg agtagaaatg aaaaaaattt
    12961 tttatttaac tttagtttct aaaatatttg ctttaagtga atttgaactt cataatattg
    13021 ataaagtgca taagctagga tatagtggag atactattat aataggtgta accgatgatg
    13081 cttttaatca aaatcatatc agtttaaagg ataagatttt aaagtcgact tatcctactg
    13141 acataaatgg gaaacagtta gtgcctgatt tgcaaaaatc aacacacgga agtcatgtag
    13201 caggtatagc tgttggggca aagatagatg agaataagcc ttatggagtg gcttatgggg
    13261 caaaatttta tggagccgga gtatttcctg agggttctta cactcaaact cctgatgttt
    13321 ataatttttt caaagatgtg agtattatta ataatagttg gggtatttct tattatcctc
    13381 atctagatct tagggcttct acttctggat tggttggttg tactcaaact ttaaatggac
    13441 aaaatgtaaa tatttgtcaa attcctttaa cttacatcaa acaagtcgat agtgtagcta
    13501 atgatttata caaacttagt ttagataaaa agcttttaaa tgtgtttgct gctggtaatg
    13561 aaggaattct cactcctgct ttacatgcaa ccttgccaag ttatgatgaa tctttaagag
    13621 cttggttagc agttggagcc ttggatgcaa atgagattac tttagaagca gatgggactt
    13681 tagtagtggc aagtaaaggt ttggctgatt ttagtaatgg ttttaagggg gctacgaatt
    13741 tttctttagt tgctgctgga gcagatatta ataatgttga ttcaagtacc aataatggtt
    13801 ttacgaaaaa aagcggcacc tctatggcag caccaatagt aagtggaaca gcggcactgg
    13861 taaagcaaaa atttcctttt ttggatggta agcaaattgc tgatgtatta ttaagcacag
    13921 ctaataaaaa ctataaagct ccaaaattta ccgttaaaca agtaactgat ggaacaaatc
    13981 aacctaaatt tcttattgtg tatatttcgc aagatccacc tactgtagaa gatgaaataa
    14041 aacgggattt aaaacagctt tataatggaa tgcaagttca aattaatgga caatgggttg
    14101 attatagtga ttatatttgg aataacagag atggcgtgca gtcgcaaaaa ctcaatactt
    14161 ctactgttaa ctttatcaat ggagtggtta gagttgaaaa agaagaatta tttgggcaag
    14221 gaattttaga tgcacaaaag gcactgaaag gactaagcat tttagatgca aacagactaa
    14281 gtgatcagga tatactaaaa tatgaaaaag aacctgatac agcttattat actataaaca
    14341 ctgcaggtca tgatgccgaa ttttctaatg acatcagtca aagaaaatgg gatgaaagta
    14401 ctcatttatc aaatgctgct aataaaccta tgcatttgac tgatcttaat ataggattag
    14461 ctaaagaggg cgaaggtgtt ttaatcatca gtggtaaaaa tacttatgaa ggtgcaactt
    14521 tagttaaaca aggagaatta aagcttaaag gaaaacttaa aaataatgct tatgtagaaa
    14581 aaaaagctat attgagtggc aatggtatcg tagggcaaga tttaaacaat aaaggtatag
    14641 ttagacctgg gaacgaagat ttgagtgatt taactgtgca aggaacttat actcaagaag
    14701 gaattgattc taaattacaa ctggattttg gtaattataa aaattccaag cttattgcaa
    14761 aaacctatga tattaaagga ggaaatttag aatacattcc tttgcctaaa tattatacct
    14821 tatataatcc agtgaaaatc aatttaggag atttaggaaa aagtttatca tcttttaata
    14881 atgttttggt gcaaaatacc tatgctttaa attttgattt tgtcttaagt aatgatttaa
    14941 tcagcattaa tgaagcttta ataaaaccta atttaaaacc aaatgcttac gaaattccta
    15001 atacaagttt ggggaatgct ttaagacaat tacgatctag aacggattta agtcaggctt
    15061 atcaagaatt ttttgcttct ttagataatg gaatagatgt aaagactaaa ttagatagag
    15121 tagaaggttc agcatactta agtgctttta ataattacga tcaatcaaat ttaatacaaa
    15181 ataacatttt atttactctt aatcctctta atatcaataa ttttgcacaa aataatatat
    15241 tacttgctag tacttattta cctagaattt ttagtgatga agaatatttt tggtatctta
    15301 ctccaagcta taaatattat aaagataaag atttttcagg tcaaaaaacg ggtgctaata
    15361 tctctttggg agaaaatttt tcatcaggtt ttttagctta tgctttatct ctttctagtg
    15421 ctaaatttaa ctttaataat ggtagtgatt tgaagggtta taatgtggat ttattgctta
    15481 attataacca tgatttagat tttataaaaa tactaagtgg attaggtata ggtgtgggat
    15541 ttaatactat tgatcgcttt gtagtagagc ctatagaagg caaatataag accttgcaag
    15601 cttcagccca gcttggggta actaaagata ttattttagg tgaagacttt gttattaatc
    15661 ctttaatgta ttttactcat agtttttttt atcaagaaga ttttaaagaa aataaaagtc
    15721 cttttgcaaa ggattatgaa agtttgaaac attatagtgt gaatgcaagt ttaggtttta
    15781 atcttgctaa aaatatagaa caagatgatt atcgagcttc tttttctact tttgcaattt
    15841 ttgaaaaaag aatttatgga aagactttag aaaataaggc tagctttgtt gattttccta
    15901 ttggttttat tcaaaaatat aaattgaaag ataatatttt aagtcaaggt tttaatttag
    15961 aatttttata taaaaacaat atgttttggc aatttatgtt aatgaataga ttttctcata
    16021 atgcttatga gttgcattta atgagttcaa taggaaaacg cttttaaaag tatttatttt
    16081 ttttaactta tattttaaaa gtatttattt ttttaagcta taatataaaa ctttaataaa
    16141 aaggaaaaaa tatggaatat agaatcgaat acgatacaat gggagagatt aaagttccaa
    16201 atgataaata ttggggagct caaactgaaa gaagttttga aaatttcaaa attggttgtg
    16261 agaaaatgcc aaaggtttta atttatgctt ttgcaaatct taaaaaatct ttagctttgg
    16321 taaataacaa acttggaaaa cttgatgatg ccaagaaaaa tgctatagtt caggcttgcg
    16381 atgagattat cacaggtaaa tttgatgata attttcctct cgtgatttgg caaacaggtt
    16441 caggtacgca aagcaatatg aatatgaatg aagtgattgc aaatcgtgct actgaaatta
    16501 tgggtggaga ttttcgtaaa gaaaggcttg tgcatccaaa tgatcatgta aatatgtctc
    16561 aaagttcaaa cgatactttt ccaactgcta tgagtatagt tgcagttgag caagtagaga
    16621 aaaaacttat ccctgctctt gatgagctta ttgcgacttt tgaaaaaaaa gtaaaggaat
    16681 ttgatggtat tgttaaaata gggcgcactc atttgcaaga tgccactcca cttactctag
    16741 cacaagaatt tagtgggtat ctttctatgc ttttacattc aaaagaacaa atcatcgctt
    16801 ctttgccaac cttaagagaa ttagccatag gaggaactgc agtaggaaca ggacttaatg
    16861 cacatccgga attaagtcag aaagtaagtg aagaacttac taaacttata ggcacaaaat
    16921 ttgtttcaag tccaaataaa tttcatgctt taacaagtca tgatgcgatt aattttaccc
    16981 atggcgcaat gaaaggtttg gctgcaaatt taatgaaaat tgcaaatgat ataagatggt
    17041 tagcttcagg tccaagatgc ggtcttggtg agcttattat ccctgaaaat gagccaggaa
    17101 gttcgattat gccaggcaag gtaaatccta ctcaatgtga agctgtcact atggttgctg
    17161 tgcaagttat gggaaatgat gcagctattg gttttgcggc gagtcaagga aattttgaac
    17221 tcaatgtatt taagcctgta attatttata atttcttaca aagtcttgat ttattagctg
    17281 attctatgca ttcatttaat atccattgtg ctgtaggcat agaaccaaat cgcgcaaaaa
    17341 ttgatcataa tcttcataat tctttaatgc tagttactgc tttaaatcca catataggtt
    17401 atgaaaatgc tgctaaagta gctaaaaatg ctcataaaaa aggtgtttct ttaaaagaaa
    17461 gcgcgatgga attaggttta gttagcgaag aagattttaa caaatttgtt gatcctacta
    17521 aaatgatagg tccaaaagcc taaattattt aacttgcctt gtttttttac taggcaagtt
    17581 aaattaaatt cttttctttt aaaatcatat acattcttaa ggttgataca aaaaaggtta
    17641 aaatcgcagg gcctaatata ataccccaaa aaccaaaggt tgaaattcct gctatcatgg
    17701 ctaaaaaaat taaaagttcg ttgattttag ttggagtttt aacaagtttt ttattgatcc
    17761 atttgataat taaaggtttg attaaagtgt ctgctataaa agaaattaca attacagagt
    17821 aaataaaaat aacaagagcc gagttaagat tgtttgaagc aaattcgtaa agacttacag
    17881 gtacataaat taaagcgccc cctatagcag gtatgagaga gcttacggca aaaattactc
    17941 ccattaaaat tccatcatag ccataaaaca ttgtgattaa accaaaaagt gtaccttgaa
    18001 atatagctac aattaccatg gaataaagca ccacggccat aacattaccc acttcgctta
    18061 aaacatcatc gagttctttt ttatcaatgg gaatgataga tttaagataa ataacaagtt
    18121 ctgttccata taggtttgca aagaaataaa atacacaaat taaaaccata tctacaagaa
    18181 atttggctcc tgattttgta aaacttgaag catagcttaa aatttgttta gaaatactat
    18241 ttaaatctat agaagctaaa aattctttga ttttagggta taaaaaatta aagctttcag
    18301 gcaaggtgaa ttgatagttt ttcacataat caagcgtttg tgtaactaaa ttaatatcaa
    18361 aattttttga agctttggca agttctatca tggtataaac aaaaggcgta aagaaaagca
    18421 aaaccataca agctgttgta aggatagagg ctaaaaattt atgtccttta gtaaggttta
    18481 aaaattttgc attgatattt gaggtggcta ccgccattaa actagctatg ataattacga
    18541 gtagaaaacc cttgaaaagg taaagtaaaa gaaataaaat gactaaaata aagcttataa
    18601 gaaagaattt tccattttgc aaaatttact cctcaaataa agttttttca tagtttaatt
    18661 ttaaagcatt ataacttttt gtacttgcta tgcgtccttt tgcagtgcgt tctatgtaac
    18721 cattagctag taaataaggc tcaatcacat cttcaaccgt attttcatct tcacttaaag
    18781 ctgcagcaat gcttgcaagt ccgatgggtc tttgtttggc agcggttaaa agttcaagat
    18841 actttaaatc cattgcatca aaaccaagct cattaactcc taaagaattt aaagcctcat
    18901 tggttctttt ttctgtgatg atttcttcat cgctgacatc agcaaaatct cttactcttt
    18961 ttaaaagtct tagggcgatt cttggagtag aacgacttct tttggctatt tcaagagcgg
    19021 ctttttcttc gcaagtttta tttagcttta aagctgcttt ttgcaagata agcgcaagtt
    19081 cactgtcttt gtaaaattct aatctaaatt gcataccaaa gcgatcgcgt aaaggattgc
    19141 taagcatgcc tgcacgcgtt gtggctccta tgagagtaaa tttaggcaag tcgattttta
    19201 tagtttgagc tgcaggacca ctacctatga tgatatcaag gcgataatct tccattgcag
    19261 agtaaagcac ttcttcaatt gcaggactta agcgatgaat ttcatcgata aaaagtatat
    19321 ctccttcgct aagattggtt aaaatagctg ctaaatctcc gcttttttct atcataggag
    19381 cagcggttgt tttgatattt gcacccattt cataggagat aatattagcc agtgtagttt
    19441 ttccaagtcc tgcaggacca ctaaaaagta tgtggtctaa acattcgtta cgttttttag
    19501 ctgcagctat gaagacattt aaattttttt taatattttc ttgacctata tagccgttaa
    19561 aatttgaagg acgcaacgag gtttcgtaag tttcatcaaa ggagtatttt tctatttcta
    19621 ctattctatc catatctttt gcttgtattt tttgaaaaat taaaataaga ttttagctaa
    19681 aatttgttag aatttagatt aaactttaat aattatggtt tgaaaatggg aattttaaca
    19741 aaattagaat tagattatga aattgacgac atagaaaaat ttttacaatt ttttagaacc
    19801 atgtgtgata ggtttgaacc tttaatcatc aaacttggaa gtgatagtgt gcgttataaa
    19861 gaagctgtaa aagagcttga aactttagca cataataccg cttgggcagc aagacgctta
    19921 aatcttgaag aagttactga tttttgtgtg ttttgtgaag agatgatggc gcaagcaaat
    19981 cgctttaatg ggcctgctag tgatgaattt actgattgga tgcttttgat gagtgatcag
    20041 tttgaaaagt attgtcgttc atacgaaaat gatgattctg ttttagcggt ttttaatcct
    20101 ttaattgtta atgttccaaa tattatttcc aaataaggga gcgacttggc ttcgacagga
    20161 gtaagtctgc ttagatggca tgccgctttg ggcaaagcgt aaaaagccca aataaaatta
    20221 aacgcaaaca acgttaaatt tgctcctgct tacgctaaag ctgcgtaagt tcagttgagc
    20281 ctgaaattta agtcatacta tctagcttaa ttttcggtca tttttgatag tgtagccttg
    20341 cgtttgacaa gcgttgaggt gaagtcaagt cttaaccttg cttttaagtt ttggaagatg
    20401 agcgaagtag ggtgaaaaag tcatctttgc taagcatgta gaggtctttg tggggttatt
    20461 tttggacagg ggttcaattc ccctcgcttc caccagtctt aaaatcggtt ttaaagatta
    20521 aaaaaatcat agttgaaagt ttttagagta tgagacccta aaaacttttt agttttcttt
    20581 aaaaagttta gaagctaagt gtgttgcacg actttgatct gtatcttttt taagagtttt
    20641 gtaaatttta ctcacatatt cttccaaggt ttgttgagaa tctatggttt tttcagaaga
    20701 aggaattttt tcatattctc cattattttt aagttcataa gctaaaacat tatcgctaag
    20761 ttgcaagcgt aaaaattgag ccaatttagc tttgcttctt tcatcatata taggagtcat
    20821 gagttctaag cgacgctcta aatttcttgg catccaatct gcacttgata taaaataatt
    20881 tggatcgcta tgtttaaaat aaaacactct agcgtgttct aaatattttc ctatgatact
    20941 tctaacgcgt atgtttttac tatattcttc attaggtttt aaacagcaaa ttccgcgtat
    21001 gataagatca atttgcactc cttctatgct tgcttcataa agggcttgta tgatattgtt
    21061 atctacaaga gaattcattt tagcaacaat cacaccttcg ttttttttga ttgtttcaat
    21121 gcgtatcatt tctaaaactt tttctttgat ttgatttgga ctcattgaaa gagtttgaag
    21181 acgacgattt ttgctaaagc ctgataagat gtgaaaaaaa cttgttgtat ctcttgcaaa
    21241 ttctgctttg cttgtaaaat aactcgtatc ggtatagatt ttagcactac ttgcattgta
    21301 atttcctgtg cttaaatgca tataaaattt aagtttatct ccttgtttgc gtatgacttg
    21361 agaaacttta gcgtggactt taaaacctgt aataccataa ataacatgag ccccagaatt
    21421 ttctagagct tttgcccagt gaagattgtt ttcttcatca aagcgtgctt ttaattctac
    21481 cattacggtt acttgttttc catcacttgc agcgtcaatt aaagcttgaa ctatattgga
    21541 atttttttcc actctataaa gtgtcattct tatggaaatt acttcaggat ctttgcttgc
    21601 ttctttgata aatttataga ccggatcaaa actttcaaaa ggttgtatga taagtatatc
    21661 ttctttttct acagcatcaa aaatagataa attttcatca aaaggtggca aagttttggg
    21721 tgtgtaaagt ggacttaaaa ggtgtgtaaa ggttttattt cctgcgattt gccaaagact
    21781 agagagattt agtaaaatag aatattcata aatatctttg tgaaaaattt tcatgtgagt
    21841 attaagaaat tctacgattt gctcatccgc atctttttgg atttgtaatc ttacaaaagc
    21901 tccttttcta cgaagtttta aaccttgttc taaaatcatc ataaaatcat cagcttcttc
    21961 ctcttctatt accatatctg catttctagt taccctaaac gctgctgagg ctaagagttt
    22021 atagcctgga aaaatttctt ctgcgtgttg atgaactatg ttttctatag gaacataaat
    22081 atttgcactt acttcataaa aacgaggcaa aactcttgga attctaatca ttccaaattt
    22141 cacaagttca ggatgtgctt tatcacaaat tttaactgct agtgaaaaag atagattgtt
    22201 taaatgtgga aaagggtgcg tagcatcaac agctattgga acaataacag gaaaaatatt
    22261 agagaaaaaa tactcatcgc atttttgttt gaaattttca tctaaatttt cataatgttt
    22321 tataaaaaga ttttcttttt ctagctcgtt tgtaatttcg ttaaaataat gctctaaaag
    22381 ttttttttct tgatgtaagt atttgcgtat agcttttaat tgttgcagag gagtcatttc
    22441 atcactactg cttgcattaa ctccagctga aaaaagttgt tttaagcctg caacgcgtat
    22501 catataaaat tcatctaaat tagtgcaata tatagctata aattttaatt tttctagcaa
    22561 aggcaaattt ttagaacatt gatctaaaac acgagaatta aagcgaagcc aagaaagttc
    22621 gcgattgata aacatatcag gacttgtttg cattaatttt tccttttttt gttgtatttt
    22681 atcatttatt ttgaaattat tggataaaag ttttaatttt tttagttaat taagagtaaa
    22741 tatatcttta aaattatatt aaatttatta tgttaaaatc aaaaaatcta cttctgggaa
    22801 attttgtgac atttttattt catttaagat ttttaagaaa tgataatttt aaggaggaaa
    22861 attttgaaga aaacttcgaa tctttttact atttttcttg ttttgctttt tgttttcttt
    22921 gcggttggtt tttatacttt ttataacgct aaaggcacat cttatttaag caatacaagt
    22981 gaatcctgta ataactgcca tattatgaat gaagtttata acgaatacat ggcaggacta
    23041 cattctcaaa aagttaaggg agaacctaga gcaacttgtg tggattgtca tttgccacat
    23101 aattttgtag ctaaatggat agctaaagca caaagtggtt taggacatgc ttatgctttt
    23161 acttttaaac tcgatgaatt acctacaaat ttgagtgcga ctgaaaaaag cagaaaaatg
    23221 gtgcaagaaa actgtatacg ctgccatgca gattttgctc aaacagctat taatgctaca
    23281 acaaatccac atgcagataa gtcgttaaat tgtgcttctt gtcataaaga tgttgggcat
    23341 aaacacggaa tttaataagg agaagataaa tgaaaaaaaa tattttacgc ttaggtattg
    23401 ttgttttggt tttatttata ggggaagttt tatggttaaa taatgatata aatcaaaaaa
    23461 aagaagatga ggcaaataaa aatgccattg cagcaaatgc cgatttttct ttgcttagtg
    23521 atgataatcc caattttgaa aaatggggta aggttttccc agaacaacta aaaatgtatt
    23581 taatggttga aaaagaagag cctaaggcca ctgaatttgg cggtaattta gcttattcaa
    23641 aattgattcg ctttcctcaa ttgatcatat tttgggcggg atatcctttt agccttgatg
    23701 ctaatgaaga aagaggacat ttttggattc aagtagatca aatgaaaaca gcaagaaaca
    23761 ataaagattt tcttaatgcc catggatttg ctgcttttaa ggggcagcca gcagcttgta
    23821 tgaattgtca cagtggatgg accccatggc ttattaaaaa tgttgctaaa ggggatttta
    23881 ttgcttttaa ctcaacaaat tattggacta tgattaaaaa tatcccagcg gttgatggca
    23941 tagtagaaaa ttcacctgaa catgcaggtc cacatggtgg taaaagaatg ggtgtaactt
    24001 gtgcagattg tcacaatcca aatgatatga gtttaagact tacccgtcca gcggctatca
    24061 atgctttagt ttctagagga tatgaaaaag atctagtaca aggtgtaaaa gctacaagag
    24121 aagaaatgag aactttagtt tgctctcaat gccatgttga atactatttt aaaccaacag
    24181 gagaaaaagt aaaagtaatg ggtgaaacta ttgcagatga tagttctaaa aaatggtgga
    24241 atggaactca gaaaaattat gatgagtatg agttttggag agatggtaat aaagccaaag
    24301 agattgaaac tgatggtata attctaacct ttccttggag tgaatggaaa aaaggacaac
    24361 catttagaat tgaaatgtta gatgattatt atgataaaat tcgtggagta tttggagctg
    24421 attttactca taaattaaca ggagcgcaaa ttatcaaaat tcaacaccca gaaagtgaac
    24481 tttatagcgg tggtgtgcat gctgcaaatg gagtaagttg tgtggattgt catatgcctt
    24541 atgttagaga aggagctaaa aaaattactc aacacaatat cacttctcct ttaagagata
    24601 ttaattctgc ttgtaaatct tgccacaagc aaagcgaaga ttacttaaaa gctcaagtat
    24661 ttgatataca aaatagtgtt gcgcacgatc aaagaacagc tgagtatgca atcgttagtt
    24721 tgattatgga tactaaaaaa ttacgcgatg aactaggtaa tatggaaaaa ttccaaacag
    24781 atgaaaaagc tgatgcgaaa aaaattagcg aagaattaaa agaagtttta gaacttcatc
    24841 gtaaagctca aatgagagca gattttgtta atgctgaaaa ttcaaccggt tttcacaatc
    24901 ctcgcgaagc ttcaagaatg ttattacaag ctgttgatat ggcaagaatg ggacaaacta
    24961 aacttgtaga aattgccgca gcaaatggaa ttaaagattt taaaacttca aatttaggtt
    25021 ttgaagatat tcaaaaattt aacccaggag agatttatta taaagttgat gttgatggtc
    25081 ataaagcagg agaacgttac tatgcagatg aaaaagatgt taatggtaat cctccaaaag
    25141 aacttttaga gtatgataaa gaacttgctc cttataatta tcaagtgatt gatacaaaat
    25201 aatcttaagc cctataaatc atagggcttt ttcttcttca ttttaaaaaa tataaacttt
    25261 ttatttaaaa ttcactttta cttcacttta ttttgtcaca ataccataaa ttttgataat
    25321 caaaaaggag ttaaaatgat caataaaaat aaactgttta gacaagttca tatttatctt
    25381 agtttatttt tcttgccttg tgctttgctt tttgctttaa ctggtatagc gtatattctt
    25441 ggtgctaatc aagatgtagg tttgaaggtt gagcagtata gattgtcaaa agttatagaa
    25501 aatggcaaag aaagagaagc tttaatacaa tatttaaaag aaaatagttt gaaagtacca
    25561 tctaatacaa atataattaa aagcaaagat aaaggcgtaa caataggcgg agcccattat
    25621 agtgccaata tagctcaaaa ttctaccaat gaatattaca ttactttaaa aacaagatct
    25681 ttgcttggag atatgattat gcttcataaa gataagggtg cttggtattt ttctgtgctt
    25741 agtgtaggtt ttggtattgc tttatttatg ctttatactt cagggcttat gattgctttg
    25801 tttgcaaata aaaaagatag aagtaaacag tttgcagttc ttggaatggg agttattgtg
    25861 actttgcttt tggcttatct tagtctttga tttttctaga ttttaagctg ggtattattt
    25921 atttttttat ataatcatac tttactttat tggacagatg ggtgagcggc tgaaaccaca
    25981 cccctgctaa gggtgcagat cttaacgggt ctcgagggtt caaatccctc tctgtccgcc
    26041 actaaatttt ataaatttgg atatctcttt taaaattatc tttcaaatca tctatattat
    26101 ttaacataaa ctttaaaaat caaatctcta tatattttta tcatcacagg ataaagattt
    26161 tcaagacttt tttctaaatt atctaaaaat aaattagctt gttttatact gcccaatgaa
    26221 ataaaatttg caatttcttc taaatcaagt aaaaatctat aagtttgtat aatttgcatt
    26281 aattattaat tttagctcta atttttgaaa aacttgatta gaagtatgag tctttaattt
    26341 accttgttta taaagttcta cattttttta taaccattaa ttcttatttt atgttctaaa
    26401 taacttaaat caagttctaa aacttctttt tcacttaaat tattatcttt acaataatta
    26461 gttaaaaaat gctgtgtttc ttttgaaaat tctaagttca tttttaatct tttttaaaaa
    26521 tttattaaaa tataaaaaca ttttctgcta aaactttttt ggaaatttca aaatatttta
    26581 taagaattaa tgcaagagac tagcccttgc gaagttgtgt cattttacag catttttgat
    26641 ttctaaaatc atagttttta atgattctaa tccatttcca tttgctagat accagtattc
    26701 tggatcaaga tagatgattt ttttgttttg tgctgctttg gtcttggcaa caagtggatt
    26761 atcgagtatg ccttgagcgc gttctttatt gcctacgatg acatttctat caataacaaa
    26821 aatataatca ggattttttt ctagtataaa ttcagaattg atacttttac catgtgtgcc
    26881 tacttttata ttttcatcta ttgcgttaat ccctaaaaca tcgtgaataa ttccaaagcg
    26941 ggattgaggg ccaaaggctg aaattttgtt agaatttgta agaacgataa gagctttttt
    27001 atcttcatca actatacttt tggctttttc aatttcattt ttaatatctg caatttttac
    27061 tgaagcttct ttttccaaat cataaagttt tgcaacgctt aagacattgt tttcaaaaga
    27121 gcttaaaaaa tttgcactat caagtcctac aaataaagtc ggagcaattt cttttaattt
    27181 gtcataaaat ttactttggc gtccagaaat gatgataaga tcaggtttta aagcactaat
    27241 ggcttcaaag tcaacttgct gcactccacc tacactaggt ttgtttttga attgctgtaa
    27301 gtattttggt aaatttttag caggaacgcc tgctacttta tcatttaact ttaaagcgtc
    27361 aaaagtatct aaaattccaa aatctaaaat caccacttta gaaggatttt tagggatttt
    27421 attttctcct agactatctt ttactaaaaa gctattgcct tcatcgctta tgctaatagg
    27481 tacaactttt accgtggcgc tagtctttgt tgtagaactt gcgttgtttt catttgagtt
    27541 tgaattacaa gctattaaaa ttaaacttgc aaaaaatgca aaaaataaag attttttcat
    27601 attttctcct ttttaaaaat aaatacaaat tttcttacca tcaatttgac ttacgggtat
    27661 atccatatca taaatttgtt ttaaaatttc ttgattgata acttcatctt ttaaaccttg
    27721 ttttaaaagt tttccatctt ttaaagctat gatttcatct gaataaaacg aagcaaaatt
    27781 aatatcatgc aatacaacag ctatactttt gttaaagtct ttgactaaat ttttcatcaa
    27841 ttgcatgatt tgcacgctat gcttcatatc aagattattt aaaggttcat caaacattat
    27901 aaattcagta tcttgtgcga tgatcatagc tataaaagct ctttgttttt gtccaccact
    27961 tagtgtatct aaaaattcat ttcttaaatt actaagtccc atgtattcta aagcttcatt
    28021 gattttgatt ttatcattta cattgagcct tccttgagaa tgtggaaaac gtccaaaagc
    28081 gactaattcc tcaactttta atcttaaatt gatattattt tgctgtttaa gaatggaaat
    28141 tttttgtgct aagatttgct ctttataatc ttttaaattc attccatcaa tataaatttt
    28201 tccactgcta ggctttatca aacgacttgc aagagctaaa agagtagatt ttcctgcacc
    28261 attagctcct attatagaag taattttacc tttgtgaaaa tcaagactaa gatctgaaat
    28321 aatagcttta ttatcataaa atttggtaat gttttttagt ttaatcataa tttattgccc
    28381 tttaatacaa gatagataaa atatatccca cctaagaaat tgataatcac gcttatagta
    28441 gtgttgtgat caaaaactct agagacaaaa aacaccccac caagtaaagc taaaatgtta
    28501 ataagtatac aagcacttag taaaatgcta tgttttgcag ttttaaaaag ctcgtaagtg
    28561 atatttacca ccaaaagtcc taaaaaggtt ataggaccta caagtgcagt gctaatagaa
    28621 gttaaaatag caatgataat catcaattgt tttgagattt tttgataact tatacctaaa
    28681 tttattgcca aatctttacc taaatttaaa ggatctaaaa atttaatata gggaaaaatc
    28741 catataaagc ttaaaaaggt aatgatataa gcaagaacta gaacatcaaa agctatattg
    28801 tcaaaactag caaacattct tccttgtatt accataaatt catcagggtc gattaatact
    28861 tcaaaaaaag agcttaaagt gctaaaaagt gttccaaaaa ttaagcctaa aagcatgata
    28921 agataaatgc ttctatcatt actaaataaa attttataaa gtcctaatga aaaaactatc
    28981 atgcaaacta gggtgattaa aaaattgata tcatttttgt aaacacttaa attggccgca
    29041 ccaaaagaaa agataagagc actttgaagt aacatatata aagaatctag tcctatgata
    29101 gcaggagtta aaattttgtt attacataga gtttgaaaga tcactgttga aacagcgata
    29161 caaatagcta ctatgataat agctgcaatt tgcaaaaaac gactttttaa agcatattca
    29221 tcaaagttat ttaaacctac aagcataaaa atacccatca tgataagtgt tgaaaagctt
    29281 aaaatcagta tttgtttacg cataagcttt cctttttaac aaaagaaaaa taaagactaa
    29341 agatcctaaa atacctgtag tgatacttaa gggcatttca aaaggaaaga taataagtct
    29401 tgaaatgata tcacaaataa gtaaaaataa agccccgcaa aatgctatat gaatgagatt
    29461 ttttctaaga ttatcaccta agtaaagagc tactaaattt gggataatca gtcctaaaaa
    29521 aggtataacc ccaacgctta caatcaccat actagttata acgcttataa tcatcaagcc
    29581 tagaaataat atcccattat aagaaattcc aagatttaaa gctatatctt cgcccatacc
    29641 aactatggta attttatgag ctaaaaagta agcaagcata aaaagtggta gagaaatgta
    29701 aagcaattcg taatttcctt gcatgacatt tgtcatactg ccttgtaacc aaccttggat
    29761 attttgtatg taatttaaaa tataagcaaa aaaagtggtt atagcactga taataccccc
    29821 aaacatcaag cctatcaaag gcacaaaaat cacatctttg agtttaattt ttcttaaaat
    29881 ttggataaaa ataaaagaac ctaaaagcgc aaatacagaa gcaatgatag cttgagtaag
    29941 aaaagatgct ccagtaaaaa atattaaaga aatgagtatg ccaaatctag cacaatccat
    30001 agtccctgct gttgttgggg aaacaaattt gttttgtgtg agttgttgca tgataagccc
    30061 acatatacta agactcattc ctgtaagtaa gattgctata agcctaggaa ttcttgtaag
    30121 ggttatgatt tctaattggg tggagctaag attaaaaata tcttccacat tgatactgat
    30181 aactcctata aataaactta tcaccccaaa gaataaaagt aaagctataa gtacttttaa
    30241 attcaatata tgcttaaaaa acaaattttt ccttatagta ataataatta tcaaaaacta
    30301 aattgtaatg aaatttgttt taagaaatga taaaactata ataatgatat ttaataagaa
    30361 atcaaaaatc cagttgaaag tctttgtagg tgtttattat aatctataag gctttctcca
    30421 taaccattga agtattgtaa ataccaataa attccattgt taaaaatatc atatcctaga
    30481 tcaacttgta tggcagcttt attatcgtgg aatttaagat tgtttcttag cataagattg
    30541 ataaaataat cattacccaa atacgctaaa ttcacatcaa aatttcccat atagtgcaag
    30601 atagcagggt tatcatcatc ttttttactt tcaggaattc tataccaaag gcgcggaaca
    30661 aataaaaatt tattatataa aatagccgta gatacataaa ttctattcca cgagcgtgat
    30721 tgtaaattct catctccttt gccattgctt tcatgtaata tacctaagcg taaattatta
    30781 aaaaatttat aatctttaaa atataaagga aaatccacaa aaaattcagg ttgataattg
    30841 ctttccctaa aaggagaaga gtgtttataa atttgccacc aagaagtttg agtataggct
    30901 atataatatt tttcatccaa tcctagtaaa ttttcaaaaa gtcttttctt aacgctaagt
    30961 tgaaattttg cttcactttt acgatttttt gctcctaatg agttaaaact ataagtaaaa
    31021 ggtaaaaaat aattcatttt ataagagcta atgccaagag gattaaagtt ttcatctttg
    31081 ccaagataat tggctaaggc taagtgagaa aagtcttgct tttcttcttt ttttgcaatg
    31141 atagaatttt gtgtttgtgt tgattgactt gagttatttt gctcttgaga aattaaaaca
    31201 ggtgaatttt ttaaagcaag ttttttgtaa atttccatag cttttttata atcgccttgt
    31261 ttttcatact ctaaagcttt ttgcagatcg ctagcccatg taaaaacaca taagcttaaa
    31321 aataaaacaa tttttctcac tttaactcgc tttgaaattt ttcatattct tcgtaaaaat
    31381 taagatttaa aaaagcatct tcatcttcaa attctacaaa tttagtttta atttcagaaa
    31441 ataaaagtcc tattttttgt gcatcttttt ctaaaaattt tttgcaagtt tgagctaaag
    31501 agctgtgata aaatccacac aaaggatgtt tgtgcaaagg agttttggct atgattattt
    31561 tatagttttg ctctaaaaag ggaagcattt ttaaaagctc attttcacct actttagggc
    31621 tatctacact caaaacaaaa acaaattcat ttttaaaatt tgaaagtatg gagtaaagtg
    31681 caagcatagg agaataaact tcaaattctg aagaatcttt aatcaagcta aaatggtttt
    31741 caaatttgtc ttcttttacg ctcacataga catttttaaa aattttagaa aatttatcca
    31801 cttgaaattg agttaaattt tgatttttaa gaattaattt acttttatct tgccccatac
    31861 gactggattt gccaccacat aaaatcacgc aatttagctc attaagctgc acaaatttcc
    31921 ttttttaatg taattttacc acaaattcgc taaaatattt tataatttct tttatgaaat
    31981 acacagaact tttgcaatta caaacttttt tctctcagtt taaaaaaatc gattttatca
    32041 agcgtattaa tgacaatatt ttggaattaa gctttgataa acaaagattt atttttgatc
    32101 ttactcgtgg aatgagtgcg atttatacag ctaaattaaa tgtaaaaaat tataatgcac
    32161 cttttgattt tatgcttaaa aagtatttta gcaatgcttt tataaaagaa gttaaggttc
    32221 ttaaagataa tcgtatttta tactttagcg taaaagccaa taaggcttat aaaagttata
    32281 agagtaagat ttattttgaa tttacgggta aaaataccaa tgttatcgtt acagatgaga
    32341 aagatttaat catggaggct ttaaggcata ttgataaaag ctatcgtgtt gtaaaaccta
    32401 atgtaatttt aaaaccttta aaaccatata aaatggatga aaattttgag gaaattaaag
    32461 attttaa
//
LOCUS       DAPWAA010000009        32401 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.009, whole genome shotgun sequence.
ACCESSION   DAPWAA010000009 DAPWAA010000000
VERSION     DAPWAA010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 32401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32401
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.009"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..312)
                     /locus_tag="RTF91_000404"
     CDS             complement(<1..312)
                     /locus_tag="RTF91_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943328.1"
                     /translation="MDQSYEFFLALHLYSLYASGFLMLFYLILTQGNFKTEFIFIRRI
                     RLFLPIYYLFLALIIFTGCLLSAIKQFQMNFNIWIMIFSWILIFALAIFHFICFKKAR
                     KF"
     gene            complement(312..737)
                     /locus_tag="RTF91_000405"
     CDS             complement(312..737)
                     /locus_tag="RTF91_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDZ4943329.1"
                     /translation="MRKAKILIALSFFLLVLSACSNDEKNISKTQNTDQEIVQIEQND
                     EKTELSDSNLPLPVDDEAQISDNEYEANPSVINSLYKQKCATCHGEKGELKPKNSTAI
                     KTLNNKIFIQKIKMIKDKNHSFLSNEQIQNLADFINKGK"
     gene            complement(737..1318)
                     /locus_tag="RTF91_000406"
     CDS             complement(737..1318)
                     /locus_tag="RTF91_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HDZ4943330.1"
                     /translation="MIIRKLFEFENAHIVRFCSSKRCKSSIHGHSYKVEVLLESKYLD
                     NAGMVYDFGLLKTYIRQIIDSFDHAITLFKYDDAKYLEEMKKYSSRWICLPVNVSAEN
                     FCRVFFILIDALLKQTKMINGEQGVTLQSIIVHETRTGYAQGFREDAYSKLMPKILLQ
                     DIEFSNGIKAEWNDIDFYNKLKNEEIFINPKEI"
     gene            complement(1315..2058)
                     /locus_tag="RTF91_000407"
     CDS             complement(1315..2058)
                     /locus_tag="RTF91_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDZ4943331.1"
                     /translation="MQLVESFLSIQGEGKYSGKLAIFMRFAGCNFNCLGFNVKILKND
                     KILTGCDTIRAVFTKDFKENYETLNANELLKRVIKLKQNFDPIIVITGGEPLIHYENP
                     EFINFIQMLLKNKFEIHFESNGSIEIDFDKYPFYKECIFALSVKLQNSGIKKDKRLNF
                     KALKAFKNCTKDSFYKFVLDAKTLDNSFLEINEILKEAPNQIFCMPMGENEQNLKKNA
                     QKIAEFCIKNGYNYSDRIHIRLWNDKEGV"
     gene            complement(2061..3023)
                     /gene="moaA"
                     /locus_tag="RTF91_000408"
     CDS             complement(2061..3023)
                     /gene="moaA"
                     /locus_tag="RTF91_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDZ4943332.1"
                     /translation="MLIDQFGRKINYLRISVTQRCNFRCLYCMPKIPFDYQPKENLLS
                     FEELFLFVKAAIDEGIEKIRITGGEPLLRKDLSVFIKMISDYKSDIDLAITTNGFLLK
                     DFAKDLKNAGLKRLNISLDTLDHKKAKTLAQKDVLDSVLSGIDEALNLGLKVKLNTVA
                     IKNLNDDELISLLEFAKSKKAQIRFIEFMENTHAYGKLQGLKRDEIIQILSQKYQIQL
                     IKKDEKAPVSIYKADDYEFGIIDPHSHEFCDSCNRIRLSAEGLLIPCLYFDEALSIKE
                     AVRKGNIKAAVEILQEVLRNKPEKNKWSVVDNETSSRAFYQTGG"
     gene            complement(3036..3551)
                     /locus_tag="RTF91_000409"
     CDS             complement(3036..3551)
                     /locus_tag="RTF91_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943333.1"
                     /translation="MSDDVLYLVFIIVLLVAMLAYMNIKERENNTKIAKLQNVIEDIT
                     KELHYLRKELGVKDDNEEDEDYKISLLKEEIMIELDKQISLKITPVLRTLKTMEHIIE
                     DFQNEQQNRLLNLEQKAQSMTKLMPNYDTEEQKIENLFKEGKSIEQIAKDLRIGTGNV
                     ELVLKFKKLIK"
     gene            complement(3548..4045)
                     /locus_tag="RTF91_000410"
     CDS             complement(3548..4045)
                     /locus_tag="RTF91_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943334.1"
                     /translation="MELTLFKAGFEAHLECCEIENNHFLGEYLKLGAISQILKWKKLA
                     LRIDFDEGEKIIFDLLLSLKEDILRLENHLDKNKELIPLKQKGIIESLNFEYLNFLDT
                     ILEKDKEYYLRFDLNNQKIAIFIKAQSQTLAKIIKIKPEDKIAFDAFVVEIQRNMIRN
                     KKGQE"
     gene            complement(4036..4920)
                     /locus_tag="RTF91_000411"
     CDS             complement(4036..4920)
                     /locus_tag="RTF91_000411"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate polyprenyltransferase"
                     /protein_id="HDZ4943335.1"
                     /translation="MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLTNDSAWF
                     GFKALILSIICAVSARNFAMATNRLMDEDIDKDNPRCANRPNVSGKIGRKSVWIFIII
                     NAIIFISCSYFINTLAFYLSFPVLFVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVI
                     IMSEIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKVGLHSIPAKFGSKATLFISAF
                     CHILAVLFWLLFVWEVWGVALGKIALIGVIISGIILAFEHKIVHKNFAHIDKAFFTLN
                     GYLSIIFFIFIWTDLLWN"
     gene            4991..5848
                     /gene="miaA"
                     /locus_tag="RTF91_000412"
     CDS             4991..5848
                     /gene="miaA"
                     /locus_tag="RTF91_000412"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDZ4943336.1"
                     /translation="MFFEIALIGTTASGKTYIANTLAREFDTIILSLDSLCVYKEINI
                     ASAKPSKNELENLNYFGIDLLSVNEHFNVELFIREYQKAKEFALSKNLPLIIVGGTGF
                     YLKTMIDGLSEKILESKSSLNNDEIYTLLLNIDPNYKIEKNDTYRLKKWLGIYEQTRE
                     IPSEFLKRTQKTGVLKDIEIYELVWDKEILKKRIQTRTKEMLDNGLLDEAKILFSNFD
                     HKLKALNSIGLKECKEYLDGKISFNELENLITIHTIQLAKRQRTFNKKFQSKILEFDK
                     ALAILKMKF"
     gene            complement(5845..6408)
                     /locus_tag="RTF91_000413"
     CDS             complement(5845..6408)
                     /locus_tag="RTF91_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HDZ4943337.1"
                     /translation="MDFYSLIFLSCALGMDAFAVSLCKGFSVKKLHLKHYLIVGIYFG
                     GFQALMPTIGYFIGINFASFIASIDHWIAFVLLSLIGLKMIKESLENENCDSNANQFG
                     FKTMLVLAIATSIDALAVGVSFAFLNVNLLLAIFLIGLITFILCIIALKIGNRFGISL
                     KNKAELLGGLVLIILGVKILIEHLFFD"
     gene            6549..6623
                     /locus_tag="RTF91_000414"
     tRNA            6549..6623
                     /locus_tag="RTF91_000414"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6582..6584,aa:Glu,seq:ttc)
     gene            complement(6757..6939)
                     /locus_tag="RTF91_000415"
     CDS             complement(6757..6939)
                     /locus_tag="RTF91_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943338.1"
                     /translation="MKKVVLISALLGAFAANVFAANTPSNVNQTHTKAHHSKAKADKK
                     HEAKTHKKTKEQTPAQ"
     gene            7167..7829
                     /gene="sodB"
                     /locus_tag="RTF91_000416"
     CDS             7167..7829
                     /gene="sodB"
                     /locus_tag="RTF91_000416"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HDZ4943339.1"
                     /translation="MFELRKLPYDTNTFGDFLSAETFSYHHGKHHNTYVTNLNNLIKD
                     TEFAGKDLVSIIKTSSGGVFNNAAQVYNHDFYFDCIKPSTGCGCGSSCQSMDANLQAA
                     LEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPIIEDKVPL
                     LVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYEWALKEGMGSVSFYANELHP
                     VK"
     gene            7899..8123
                     /locus_tag="RTF91_000417"
     CDS             7899..8123
                     /locus_tag="RTF91_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943340.1"
                     /translation="MDNSLSAYTQKYDKEGYGLQYPDGHVIRFYERILKYKLNKISGK
                     LLDFGCGNGVHSKYFKNITGGGVLSLMALI"
     gene            8228..8590
                     /locus_tag="RTF91_000418"
     CDS             8228..8590
                     /locus_tag="RTF91_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HDZ4943341.1"
                     /translation="MDFIFANQSLYYLTKQAFKEAIQEFYELCNEEAIIFATMMSDKG
                     YSMYERGKLMDNGLCEVKGCPSGRLSGSSYIRFTKDIEELKEDFKPFKPLFWGDYELI
                     NLYNFEGSVEHFIYIGQK"
     gene            complement(8603..9808)
                     /locus_tag="RTF91_000419"
     CDS             complement(8603..9808)
                     /locus_tag="RTF91_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase family protein"
                     /protein_id="HDZ4943342.1"
                     /translation="MKNLLIIGAGGVSRVATVKCAMNSDTFNKITLASRTKSKCDEIA
                     AFIKERLGVQIETAQIDADDSDAVVKLIKKTGAEILLNVALPYQDLSLMDACIKATID
                     YIDTANYEHPDLAKFEYKEQWARNDQFKQAGILGLLGSGFDPGVTNVFCAYAQQNLFD
                     EISYIDILDCNAGDHGYAFATNFNPEINLREVSAKGRYWENGKWIETEPMEIKMEWDY
                     PEVGVKDSYLLYHEELESLVKNIKGLKRIRFFMTFGQSYLTHMKCLENVGMLGIKPVI
                     HQGKEIIPIEFLKTLLPDPASLGPRTKGYTNIGCVIRGLKDGKDKQVYIYNVCNHEEC
                     YKETGAQAVSYTTGVPAMIGAKLIAKGIWQGKGVFNMERFDAKPFMEELNSQGLPWKI
                     IEMTPSLGE"
     gene            complement(9844..10752)
                     /locus_tag="RTF91_000420"
     CDS             complement(9844..10752)
                     /locus_tag="RTF91_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943343.1"
                     /translation="MMLEIKNLSKNFGKIQALENINLHVKEGEFLSILGGSGSGKSTL
                     LRIIAQLEQASSCDLFYCKGEVALMFQNYALFPHLNVEKNILFALYDKKDKNKILNHL
                     LKTFEIKDLRYKKIDEISGGQAQRVAFARAIARGCKLLLLDEPFSNLDQNLKQDLRRE
                     LKKMIENQDITAIMVTHDIEDAYCMSDQIAFLDKGKILAHASPKELYFNPNFKSAQIL
                     PDLNIIEEKLDLKDEFFAWIASKNYIFGYAELKIGGRFEAEILQKEFLGAFYRLKLRY
                     KNIEFFMLLSSNYDLQEKINFDIINF"
     gene            complement(10736..12352)
                     /locus_tag="RTF91_000421"
     CDS             complement(10736..12352)
                     /locus_tag="RTF91_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDZ4943344.1"
                     /translation="MYKTLKYYKLGAILLALFIALPIFGIFAELFYILFQNFNTSNLA
                     EFSSIKENLSHFFDYLFLKFIKNTFIISVGVLCLSLILGVSSAYLIANYDFYFCKILE
                     KLLILPLAIPAYILAFVYVGIMDFQGFFHENFGFRIDFFNHYGVIFVLGISLYPYIYL
                     FAKTAFKSEAKEAYEVAKIMKHSEFRIFIRVALFSARPAIFSGALLVLMETLSDYGAS
                     AYLGIDTFSAGIFKLWYDLNDSYSSSVLSGILMLFVFLIMYVDYYYKNKHHYSFNQNL
                     ALFIKKRKLNRIKQILSCIYCFTIAFTGFILPFIWLVYWGLKDHKLFESQFYIISLQT
                     IILALITALITAFLAYFLMFISRIVKNHFFNLFILKISSLGYSIPAAALGISIIVLFV
                     FLDKILHMNLLGNSLLILVFAYIIRFLASAIYSLEGGYNKIHLNIDEASLNLRASYFI
                     LFFKIHTPLMKHFLFLAFIIVFIDTIKELPLSRILAPFGFETLSVKAFWFASDERIYD
                     AALPSLFIVFLSLIIIVWIDKITRKDDVRN"
     gene            complement(12352..13356)
                     /locus_tag="RTF91_000422"
     CDS             complement(12352..13356)
                     /locus_tag="RTF91_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HDZ4943345.1"
                     /translation="MKKIFSIFLMAFSFLGAAELNIYSARHYDADFEIIKKFEEKTGI
                     KINHTQAKASELIKRLSLEGSNSPADVFITADISNLTEAKNLGLLSPVSSKYLEEFIP
                     AHLRDKDKEWFAITKRARIIAYNKNANIDISKMKNYEDLAKPEFKGEIVMRSATAPYS
                     KTLLASIIANDGNKNAKAWAKGVLDNLATSPKGGDRDQARQVFAGEAKFAVMNTYYIG
                     LLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQESAKKFMEFVLSP
                     EIQKILTDSNYEFPIRNDIELSQTVKDFGTFKEDQIPVSQIAENIKEAVKIYDQVGFR
                     "
     gene            complement(13367..13474)
                     /locus_tag="RTF91_000423"
     CDS             complement(13367..13474)
                     /locus_tag="RTF91_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943346.1"
                     /translation="MKKIVLFLLCVGFAFACSNHSHTDKDLNKTEYNSQ"
     gene            13670..14869
                     /locus_tag="RTF91_000424"
     CDS             13670..14869
                     /locus_tag="RTF91_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HDZ4943347.1"
                     /translation="MFSSFFASKKWALWAYSGLFLLLFFLFIQTSLNVAINSWYSDFY
                     NVLQKPKIEILDSNSTQKTEINFENNATLIQEAEKKAEQNLQKANFINKGALYYYQNL
                     LKYFFNSRAMIEKPNYSANDFYALILVFLAIAIPYVLIATINIYFASVYAFKWREAMT
                     FSYLKFWKNKDDNIEGSSQRIQEDTYNFSKIVESLGLSFIKALMTLVAFIPILWTLSD
                     VVSKALFANLSENSSFYFLKNIDGLLVYVALLISLGGLVVSWFIGIKLPGLEYNNQKA
                     EAAFRKELVYAEDNRKEYAKNETMIELFTGLKFNYKRLFLHYGYFNIWLILFEQMIVI
                     VPFLIMAPGLFAGAIGLGIVMQINNAFDQVRSSFSVFITNWTTITQLRSIYKRLKEFE
                     KNISYKS"
     gene            14969..16327
                     /locus_tag="RTF91_000425"
     CDS             14969..16327
                     /locus_tag="RTF91_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDZ4943348.1"
                     /translation="MDPSQVLDLNQTSTVSFDAGYSILMIVVALALVFLNGFFVLSEF
                     SIVKVRRSKLEEMVKEKKAGAKKALEVTSRLDTYLSACQLGITLSSLALGWIGEPAIA
                     KMLEIPLINFGFSAVIIHTIAFIIAFSIITLLHVVLGELVPKSIAIAVADKVVLFIAR
                     PLHWFWILFLPCIKIFDFLAAISLKLFGIKPAKESELTHSEEEIKIIASESQKGGVLD
                     EFETEIIRNAVDFSDTVAKEIMTPRKDMICLNKQKSYEENMQIICEHKHTRFPYIDGS
                     KDTILGMIHIRDIIQNELSGKSQNLDTFVKPLILIPENISISKVLVMMNKERSHTALV
                     VDEYGGTAGILTMEDIMEEIIGEIKSEHEEDSYKKLAENIYEFQGRCDIETVEEMLLI
                     NYDEDLEQVTIGGYVFNLLGRLPIVGDRIEDELCYYEVKKMDGNSIERVKVVKKTNKD
                     EE"
     gene            complement(16340..17524)
                     /locus_tag="RTF91_000426"
     CDS             complement(16340..17524)
                     /locus_tag="RTF91_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HDZ4943349.1"
                     /translation="MRILLVLRGNYHAGQEEFIKNNKLQNYTLDLNALRLLSGSIKNI
                     VSEYKILNVKNDEDLSKILLKLLEMRMQKGEFCIINAYNETLKIYKDLAKQYRYKMYV
                     IAFDSSLKQCQEKNLLEAKKNGYIIPYALLEKTQDLLKKTQKKYLILKSKDWKKCLYQ
                     MPNLSKYKKIHHIGDLQGCYHVLKEYIKTIKEDEFYIFLGDYINRGIENGKVIKFLLK
                     ICEKENVCLLEGNHERHLIKWANGELSNSKEFNENTLKDFRKEKLTPRDARKLYPHLK
                     ECLYYKFQNKFIFCSHGGVNFIPSKPETISFIPSHDFIYGVGRYEDSQKVANQFCNFT
                     SDNLYQIFGHRNKEKLPMQIAKRVFLCEGKVDNGGYLRVVTLDKKGFECIEVKNQIYK
                     KR"
     gene            complement(17534..17743)
                     /locus_tag="RTF91_000427"
     CDS             complement(17534..17743)
                     /locus_tag="RTF91_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HDZ4943350.1"
                     /translation="MAKDANGTELNAGDSVSVIKDLKVKGASMTLKRGTTIKNIKLSS
                     KESQIEAKVDKFGVIVLKTEFLKKI"
     gene            complement(17736..18455)
                     /locus_tag="RTF91_000428"
     CDS             complement(17736..18455)
                     /locus_tag="RTF91_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDZ4943351.1"
                     /translation="MFEWVFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEYR
                     DRGRILGLAFAMITRILLLLSLFWVMQLITPLFSVLGNEISGRDLVLLLGGLFLIVKS
                     IKEIKEQIFHQEESESHFKVSNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMII
                     AVIIAVAVMLFASKPIADFVEKYPSIKILALTFLVLIGFILIAESFDIHIDKAYIYTA
                     MAFALVVQILNILDQRKEKNG"
     gene            complement(18521..19090)
                     /gene="purN"
                     /locus_tag="RTF91_000429"
     CDS             complement(18521..19090)
                     /gene="purN"
                     /locus_tag="RTF91_000429"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDZ4943352.1"
                     /translation="MLVKLAVLFSGNGSNLENILEKLHKKTIGANTYEIVLCLCNKKD
                     AFGIQRAKKFGLDSVIVDHKAYNTREEFDAILVQKIKESGADLTVLAGFMRILSPVFT
                     KNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVTVHWVNEELDGGMIIAQKAFEKR
                     NLSFEEFKAKIHALEHEILPLSVIEIFLK"
     gene            complement(19081..20451)
                     /locus_tag="RTF91_000430"
     CDS             complement(19081..20451)
                     /locus_tag="RTF91_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HDZ4943353.1"
                     /translation="MKAIIDNIKNLEQNAINKGLNELILMENAGLNLAKLIKKQAKKI
                     RIQYKIKKVKILFLLGGGNNGADGLVALRNLKHAKAYKIGFKENALFKKQEKILQNYA
                     FKFYQKEPDFKKFHIIIDCILGTGSNRCLDEKASLILQKANQSKALKIACDIPTNLGF
                     YPCFKADITLCMGVLKEILLEDFAKEFVGKIKIAHLGISTKKFHPNSQVFLLEKKDLK
                     TIDRKINANKGNFGHIYIVANASAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKI
                     ENNASAIALGMGLENLYFLKDEILQNTPLVLDANCFLSESLLGYLNRKDVVLTPHPKE
                     FIRLYKMCFDEDLNIEALQKNRFFYARKFSQNYDCVLVLKGANPIIIQKEKLFVVNLG
                     NQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHALVAKKYKFNKNSFDALKLI
                     KGLKCL"
     gene            complement(20435..21133)
                     /locus_tag="RTF91_000431"
     CDS             complement(20435..21133)
                     /locus_tag="RTF91_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HDZ4943354.1"
                     /translation="MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQ
                     KNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSD
                     YTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKNESKKEDILSKDYLRALIN
                     ITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREK
                     NIYFLVKKDYESYY"
     gene            complement(21135..22640)
                     /locus_tag="RTF91_000432"
     CDS             complement(21135..22640)
                     /locus_tag="RTF91_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDZ4943355.1"
                     /translation="MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASVAIKESVE
                     RIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELGDFFVVGEL
                     GLDGSIKSTNELFSLLLFLSAKIEKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEF
                     FKEKNYIKFQFSHNHPLFTNPLKIENEIFLQNLEFKLDFKDIKGQEKAKRACMIAALG
                     MHNILLEGSPGSGKSMCAKRLVYIMPPQSLSEVLMQNAYMSLNSKDCEFTKIRAFRHP
                     HHTSTRASIFGGGAKNARIGEIALANGGVMFFDEFPHFNKQVIESLREPLEDHKIHIS
                     RVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLY
                     VAMDEISKDDKSSISSKEMSERILQAFIFGKKRGQKEFNGKLKDEDLNHFCILEKDAK
                     DTLDLAISRYNLSLRSLNKILKVSRSIADLEQSVDINKMHILEALSFRARI"
     gene            complement(22609..23163)
                     /locus_tag="RTF91_000433"
     CDS             complement(22609..23163)
                     /locus_tag="RTF91_000433"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002900764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDZ4943356.1"
                     /translation="MVRKIITYPNPKLFLSSETVNKFDAELHNLLDDMYETMIASNGV
                     GLAAIQVDVPLRVLLVNIFNENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDF
                     FEEVKRYNHVLLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKF
                     DKEFKKRRKITKKRNEKAKVHKFS"
     gene            complement(23199..23783)
                     /gene="clpP"
                     /locus_tag="RTF91_000434"
     CDS             complement(23199..23783)
                     /gene="clpP"
                     /locus_tag="RTF91_000434"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDZ4943357.1"
                     /translation="MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELASSIV
                     AQLLFLEAEDPAKDIYLYINSPGGVITSGFSIYDTMNYIKPNVCTICIGQAASMGAFL
                     LSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQK
                     VAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK"
     gene            complement(23783..25117)
                     /locus_tag="RTF91_000435"
     CDS             complement(23783..25117)
                     /locus_tag="RTF91_000435"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDZ4943358.1"
                     /translation="MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGF
                     RPGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALKELKKESKELVGEPYFEKFDRKD
                     GEIIAELILSFKPEIKLDDYEKLIPEYQTPKVSKKEIDEKKEELLKRFATPEAIKTKR
                     ALQEGDFAKFDFEGFLDDKAFEGGKAENYVLEIGSKQFIPGFEEGMVGMKIGEEKDIK
                     VTFPKEYSVAHLANKDATFKVKLHEIQELKIPELDDEMLKKLLPGEEKASIEVLDEKL
                     KEQIKNEKLFKLVNDELKGKFADALIEKYNFYLPKGIVEQETDMQMRAAFNTFSEKEI
                     EELKANKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRY
                     GMNPKEHLENYKKQGALPAVKMALIEEKLFNDIFMPKTEKSKKVNKKEKEDK"
     gene            25258..25830
                     /gene="folE"
                     /locus_tag="RTF91_000436"
     CDS             25258..25830
                     /gene="folE"
                     /locus_tag="RTF91_000436"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDZ4943359.1"
                     /translation="MQKKFEDCIKTMLETIGENPNREGLIKTPNRVFRAYEFLTSGYT
                     QNVKEILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKI
                     PRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGVQKANSTTT
                     TSALRGIFLKNEKTREEFFSLINSAKQVRF"
     gene            25830..27209
                     /gene="fliI"
                     /locus_tag="RTF91_000437"
     CDS             25830..27209
                     /gene="fliI"
                     /locus_tag="RTF91_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HDZ4943360.1"
                     /translation="MNLEKLRSKLGKENLSAIFGEITKISATSIEIRGLKTGVGDIVK
                     LVSNENENLNTLAMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGR
                     VVDPFMRPKDGKGSIEVSKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQK
                     LGIFAGSGVGKSTLMGMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKFDDTVLIV
                     ATSDDSALMRKYGAFCAMSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTT
                     KGYPPSVLSLLPQLMERAGKEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVL
                     SRELTDFGIYPPINIQNSASRVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQ
                     KGSDKELDEAISKKEFMQKFLGQNPEESFEFNQTLELLSQIDMPNIPLPPTQNINTGS
                     ATLPNPNLK"
     gene            complement(27212..28549)
                     /locus_tag="RTF91_000438"
     CDS             complement(27212..28549)
                     /locus_tag="RTF91_000438"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDZ4943361.1"
                     /translation="MCAVVGVINSKNASTYAYYALFAMQHRGQESSGISVSNGKNIKT
                     IKAKGEVNQIFNPDNLKTLEGEIAIGHNRYSTAGNSSLNDAQPIAATSSFGDIALAHN
                     GNLVNKEEVRLRLIQDGAIFQTNMDTENVVHLIARSKKESLKDRFIESLKECVGAYCF
                     VLASKDKLYVVRDPYGVRPLSLGRLKDKGYIVASETCAFDLIEAEFIRDVKPGEMLIF
                     TQGNDKFESIELFSQTPRICAFEYIYFARPDSIMEGKSVYEVRKKMGEALAKKFAYKA
                     DFVVPVPDSGVSAAIGFAQYLQIPLEMAIVRNHYVGRTFIEPTQELRNLKVKLKLNPM
                     HKVLEGKEIVVIDDSLVRGTTSKKIISLLRAAGASKIHLAIACPEIKFPDTYGIDTPT
                     FEELISANKNAKEVREYVEADTLSFLSIEELTQSIGDERKYSLISFDGDYFIK"
     gene            complement(28551..29279)
                     /locus_tag="RTF91_000439"
     CDS             complement(28551..29279)
                     /locus_tag="RTF91_000439"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDZ4943362.1"
                     /translation="MIKIGIYGAKGRMGKQIEECLKSQTQAQISILYDKGGNLEELFE
                     KSDVIIDFSSPSGTHELLNYARTMPKPLVIGTTGLDEKILHLMQNASKVMPIFYATNM
                     SLGVAVLNYLASKASQMLRNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEK
                     VRVSGRDGIIGERTKDEIAVMSLRGGDIAGSHTVGFYEDGEFLELNHTATSRATFAKG
                     AIKIAIWLSKQEAKMYSINDFLGI"
     gene            29431..30888
                     /locus_tag="RTF91_000440"
     CDS             29431..30888
                     /locus_tag="RTF91_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HDZ4943363.1"
                     /translation="MFYIKFLAPIVFAFIIYIIPTPEGVSLNTWLYFSIFIGLIIGLI
                     LEPIPPALMGVIAVTIAVLFKVGPIGSGDVQTIIKDSIAIKWGLEGFSNSVVWLIFAA
                     FTIGLGFSKTGLGERIALYLVFKLGKSTLGLGYAIAIVDFILAPFIPSNAARSGGTVY
                     PIVNSIAPMFESYANKNPRKIGAYLVWVGLASCCVSSSIFLTGQAPNSLALSLISQNG
                     VGVVDWLGWFLAFLPMSIILFIITPLLVYFIYPPEIKGSKEIASWVEEKYKTLGKMPY
                     TQIFMLIIALIGLTLWVGASFFKINATTTALIMIILMIACKVITWQDFLSNKAAWNTL
                     VWFATLVTMASGLKNVGFLDYLAGILGHQLTGFKPFIATILLLMLFSWLRYFFASATS
                     YVTAIIAIFVSLASSIEGADPSLIMLILVLPMGFMGVITPYGTGCSPLWFGSNYIKGP
                     QFFLLGGIFAAIYMAIYLAIGIPWIKFIMPYLSFH"
     gene            complement(30948..32123)
                     /locus_tag="RTF91_000441"
     CDS             complement(30948..32123)
                     /locus_tag="RTF91_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HDZ4943364.1"
                     /translation="MSLALTFRPENFDDILGQYELIEIFKKFTALQKLPHSIFFGIAG
                     SGKTTFARVVAKEFGLDFYEFDGGNFKLEELRKILDNYKNSLYKPLIFIDEIHRLSKT
                     QQEMLLIPMENYRLILIGASTENPYFVLSSGIRSRSMLFEFKSLGVKELEILLSRVQE
                     KMKFSIDEEARDFLLKSADARAMLNLLEFVLVLDEKHINLSNLKKLRNTINSEGVSSK
                     DTHYILASAMIKSLRGSDVDAAIYYLARLIDAGESADFIARRLVIFSSEDVGNADPNA
                     LNLAVSTLEAVKNIGYPEARIILAQCVVYLASAIKSNASYKAINEALTYVRNNEALEI
                     PNYLNNNHQEKQNYLYPHDFGGWVEQKYLSKDLKFYHSKGLGEEAKLLKNLHKLKKQ"
     gene            complement(32123..>32401)
                     /locus_tag="RTF91_000442"
     CDS             complement(32123..>32401)
                     /locus_tag="RTF91_000442"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943365.1"
                     /translation="LDLKIQNLILEKNKQNISFQGNLNINNTYQAKLRIISSDEPDKI
                     FLWAKNYGGLNQYFLKENNNFFLNLSYDSLANPQLKINDSEFSNMDLN"
BASE COUNT        10984 a         5100 c         4443 g        11874 t
ORIGIN      
        1 aaattttctt gcttttttaa aacagataaa gtgaaaaatt gctaaggcga aaattaaaat
       61 ccaagaaaaa atcattatcc agatattgaa attcatttga aattgtttta tagctgataa
      121 taaacaacct gtaaaaataa tcaaggctaa aaataaataa taaattggta aaaatagtcg
      181 aattctacga ataaagataa attcggtttt aaaattccct tgtgttagta taaggtaaaa
      241 aagcattaaa aaaccgctcg cataaagact ataaagatgt aaagccaaaa agaactcgta
      301 actttgatcc attattttcc tttgtttata aaatcagcta aattttgaat ttgttcattg
      361 cttaaaaaac tatgattttt atcttttatc atttttattt tttgtataaa aattttatta
      421 ttcaaggttt taatggctgt gctattttta ggttttaatt cgcctttttc tccatgacaa
      481 gtggcgcatt tttgtttata caaagagttg ataacactag gattggcttc atattcatta
      541 tctgaaattt gtgcttcatc atccacgggc aaaggtaggt tggagtcgct taattctgtt
      601 ttttcgtcgt tttgttctat ttggactatt tcttgatctg tattttgagt cttagaaata
      661 tttttttcgt cgttagaaca ggcagataaa actaataaaa aaaaacttaa ggcaattaaa
      721 attttagctt ttcgcattaa atctcctttg gatttataaa aatttcttca ttttttaatt
      781 tgttataaaa atctatatca ttccattctg ctttaatgcc atttgaaaat tctatgtctt
      841 gaagtaaaat ttttggcatt agcttactat aggcatcttc tctaaatcct tgtgcataac
      901 ctgttcttgt ttcatgaaca ataatgcttt gtaaagttac cccttgttct ccatttatca
      961 tttttgtttg ttttaataaa gcatctataa gtataaaaaa tacgcgacaa aaattttcag
     1021 cacttacatt gacaggtagg caaatccaac gacttgaata ttttttcatt tcttctaaat
     1081 attttgcgtc atcatattta aaaagagtga tagcatgatc aaaactatca ataatttggc
     1141 gtatataggt ttttaaaaga ccaaaatcat agaccatgcc agcattatct aaatatttgc
     1201 tctcgagtaa aacttcaact ttataagaat gcccatgaat gctactttta caacgcttag
     1261 atgaacaaaa tctaacaatg tgtgcgtttt caaattcaaa taattttctt ataatcatac
     1321 accctcttta tcgttccaaa gacgaatatg aattctatca gaataattat aaccattctt
     1381 gatacaaaat tcagcaattt tttgggcatt ttttttaaga ttttgctcat tttctcccat
     1441 aggcatacaa aaaatttgat tgggggcttc ttttagaatt tcattgattt ctaaaaatga
     1501 attatcaagt gttttagcat ctaaaacaaa tttatagaaa ctatcttttg tacaattttt
     1561 aaatgctttt aaagctttaa aattcaatcg cttatctttc ttgataccgc tattttgaag
     1621 tttaacgctt aaagcaaaaa tacattcttt ataaaaagga tatttatcaa aatcaatttc
     1681 tatacttcca ttgctttcaa agtgtatttc aaatttattt tttaataaca tttgaataaa
     1741 gtttataaat tcaggatttt cataatggat caatggctcg ccgcctgtaa tgactattat
     1801 aggatcaaag ttttgtttta attttattac cctttttaaa agttcattag catttaaagt
     1861 ttcataattt tctttaaaat cttttgtaaa aactgctctt attgtatcgc atcctgtgag
     1921 aattttatcg ttttttaata tttttacatt aaaacccaaa cagttaaaat tacaaccagc
     1981 aaaacgcata aaaatagcta atttgccact atattttcct tctccttgaa tacttaaaaa
     2041 actttcaacg agctgcaaaa ttaaccccca gtttgataaa aggcgcgaga tgaggtttca
     2101 ttatcaacaa cactccattt atttttttcc ggtttatttc ttaatacttc ttgtaatatt
     2161 tctacagcag ctttaatatt accttttcga accgcttctt ttatgctcaa tgcttcgtca
     2221 aaataaaggc aaggtattaa caagccttca gcacttaagc gtatgcgatt gcaagaatcg
     2281 caaaattcgt gactatgtgg atctataatc ccaaattcat aatcatctgc cttgtaaatg
     2341 ctcacaggag ctttttcatc tttttttata agttgaattt gatatttttg acttaaaatt
     2401 tgtatgattt catctctttt taatccttgt aatttgccat aagcatgggt attttccata
     2461 aattctataa agcgaatttg agcttttttt gattttgcaa attccaaaag agatatcaat
     2521 tcatcatcgt ttaaattttt aatagctacg gtattgagtt ttacttttaa acccagattt
     2581 aaagcttcat caattccaga taaaacacta tctaatacat ctttttgtgc aagagttttt
     2641 gcttttttat gatctagagt atcaagtgaa atattgagtc gtttaagtcc agcatttttt
     2701 agatctttag caaagtcttt tagtaaaaat ccatttgtag ttatagcaag atcaatatcg
     2761 cttttataat cgctaatcat ttttataaaa acacttaaat cttttctcaa taaaggctct
     2821 ccacctgtta tacggatttt ttcaattcct tcgtctatag ctgctttaac aaataaaaaa
     2881 agctcttcaa aacttaataa attttctttt ggttgataat cgaaaggaat ttttggcata
     2941 caataaaggc aacgaaaatt acacctttgt gtaactgaaa ttctaagata atttatcttt
     3001 ctaccgaatt gatctataag catttatctt ccattctatt ttattaattt tttaaatttt
     3061 aaaacaagtt ctacattccc agttccaatg cgtaaatctt tggctatttg ttctatgctc
     3121 tttccttctt taaaaagatt ttctattttt tgttcttctg tatcgtaatt tggcataagt
     3181 ttagtcatgc tttgtgcttt ttgttccaaa tttaaaaggc ggttttgctg ttcattttga
     3241 aaatcttcta taatatgttc catagttttt agcgttctta aaacaggagt aatttttaaa
     3301 ctaatttgtt tatcaagttc aatcataatt tcttctttta aaagagagat tttatagtct
     3361 tcatcctctt cattatcatc tttaactcct aattctttgc gaagataatg aagttctttg
     3421 gtaatgtctt ctatcacatt ttgaagtttt gctatttttg tattattttc tctttctttg
     3481 atgttcatat aagctagcat tgcaactaaa agtacaatta taaaaactaa ataaagcaca
     3541 tcatcactca ttcttggcct ttcttatttc ttatcatatt tctttgaatt tcaacaacaa
     3601 aagcatcaaa agctattttg tcttcaggct taattttgat aatttttgcc aatgtttggc
     3661 tttgagcttt gataaaaata gctatttttt gattatttaa atcaaatctt aaataatatt
     3721 ctttatcttt ttctaaaatg gtatctaaaa aatttagata ttcaaaattt aaagattcta
     3781 ttatcccttt ttgtttaagg ggtatgagtt ctttattttt atctaaatga ttttcaagtc
     3841 ttaaaatatc ttcttttaga ctcaaaagaa gatcaaaaat aattttttca ccctcatcga
     3901 agtcaatgcg taaagcaagt tttttccatt ttaaaatttg agaaattgct ccaagtttta
     3961 ggtattcccc aagaaaatgg ttgttttcta tttcacaaca ttctaaatga gcttcaaatc
     4021 ctgctttaaa aagtgttaat tccataataa atcagtccaa ataaaaataa aaaatataat
     4081 acttaaataa ccatttaaag taaaaaacgc cttatcaata tgagcaaaat ttttatggac
     4141 aattttatgt tcaaaagcta aaataatacc acttataatt accccgataa gtgctatttt
     4201 tccaagtgct acaccccaaa cttcccatac aaaaagaagc caaaataata ctgctaaaat
     4261 atgacaaaaa gccgatataa ataaagtagc ttttgagccg aatttagcag ggatagaatg
     4321 aagccctact tttttatcat actccatatc ttgcaaagaa taaagtagat caaatccagc
     4381 tgtccaaaaa gttacaccca aacataaaat aacgctataa atgtgaattt cactcataat
     4441 tataacactt cctgcaatag gtgcaagtcc taaacaaaat cccaaaacca aatgcgccaa
     4501 agaactaaag cgtttaaaag ctgaataaat agccaataca aaaagcacag gaaaagatag
     4561 ataaaaagcc aaagtattaa taaaataaga acatgatata aaaataatcg cattaatgat
     4621 aataaagatc catacgcttt ttctgcctat ttttccgctg acattaggac gatttgcaca
     4681 acgaggatta tccttgtcta tatcttcatc catcaaacga tttgtagcca tagcaaaatt
     4741 tcttgcactt accgcacaaa taatacttaa aatcaatgct ttaaaaccaa accaagcgct
     4801 gtcatttgta agttttgatg ctacaatcat agaggaaaat aaaaaaggta aagcaaaaat
     4861 agaatgctta aatactacaa gctctaaaat atctttaaat tttatccaga atgtgttcat
     4921 ttttctactt taaaatattt tttgctatga ttttactaaa atttttataa attttaggat
     4981 aaatattaaa atgttttttg aaatagcact tataggaaca accgcgagtg gaaaaacgta
     5041 tatagcaaat actttagcaa gagaatttga tactattatt ttaagtcttg atagtctttg
     5101 tgtttacaaa gagattaata tagcaagtgc taaaccttct aaaaatgaac ttgaaaatct
     5161 gaattatttt ggaatagatt tattaagtgt taatgaacat tttaatgtcg agttatttat
     5221 aagagaatat caaaaagcaa aagaatttgc tttaagtaaa aatttacccc taatcatagt
     5281 aggtggaact ggattttatt taaaaaccat gatagatggt ttaagtgaaa aaatcttaga
     5341 gtcaaaaagt tctttaaata atgatgaaat ctatactctt ttattaaaca ttgatccaaa
     5401 ctataaaata gaaaaaaatg atacttatag attgaaaaaa tggttaggta tttatgaaca
     5461 aacaagagaa attcctagtg aatttttaaa aagaacacaa aaaaccggag tacttaaaga
     5521 tatagaaatt tatgagcttg tatgggataa agaaatttta aaaaaacgca ttcaaactag
     5581 aacaaaagaa atgcttgata atggactttt agatgaagcg aaaattcttt tttctaattt
     5641 cgatcataaa cttaaagcat taaattctat aggcttaaaa gagtgtaaag aatacttaga
     5701 tggtaaaatt tctttcaatg aacttgaaaa tttaattaca atacatacta tacaacttgc
     5761 caaaagacaa agaactttta ataaaaaatt ccaaagcaaa atcttagaat tcgataaggc
     5821 tttggcaatt ttaaagatga aattttaatc gaaaaacaaa tgttctatta gaatttttac
     5881 tcctagtata attaaaacca atcctcctaa aagttcagct ttgtttttaa gagaaattcc
     5941 aaatcgattt cctattttta aagcaatgat acataaaatg aaggtgataa gacctattaa
     6001 aaatatagct aataataaat ttacatttaa aaatgcaaaa ctcacaccaa cagctaatgc
     6061 atcgatgctt gtagcaattg ctaaaactaa catggtttta aaaccaaatt ggttggcatt
     6121 gctatcacag ttttcatttt ccaatgattc tttaatcatt tttaatccta ttaaagaaag
     6181 taaaacaaaa gctatccaat gatcaatact tgcaataaaa gatgcaaaat ttatacctat
     6241 aaaataacca atagttggca ttaaggcttg aaatccacca aaataaattc caacaataag
     6301 ataatgtttt aaatgtagtt ttttaacgct aaaaccttta cataatgata cagcaaaagc
     6361 atccattcct aaagcacagg ataaaaaaat aagactataa aaatccataa ataaatccta
     6421 aatttataaa aaattaaaga tgaaattata atcaaacaaa gataaaaacc acataatttt
     6481 aatatattta attaaatttt aagaaataaa gatatataat tcatttttat ttcttactcc
     6541 ttaaaagtgg cccattcgtc tagcggttag gacatcgccc tttcacggcg gtaacacgag
     6601 ttcgagtctc gtatgggtca ccacttttta attttttctt ttaaaataat gattttttca
     6661 attttcctac tgaatttaat aaatattaat aatttatttg tagaatacga atagcttttg
     6721 atataagcct ataaagactt atatcaaggc tgggcattat tgagccggtg tttgctcttt
     6781 tgtttttttg tgagttttag cttcatgttt tttatcagct ttagcttttg aatgatgagc
     6841 ttttgtatgt gtttgattta cattgcttgg agtgttagct gcaaaaacat tagctgcaaa
     6901 agcacctagt aatgctgaga ttagtacaac ttttttcata ttttcctcct tatgaataat
     6961 ttttagttgc aaattaattg taattattaa aaatcaacaa atagatattt tttgtaaaaa
     7021 tatttcaaaa aatataattt ttcatattta aatttaacat taaatgcatc ttaattctat
     7081 atcaagctaa acaaatagat atttttctct ttttaatatt attatggtaa tattttcaac
     7141 atcaaactaa aaataaagga gaaattatgt ttgaattaag aaaattacct tatgatacca
     7201 atacttttgg tgatttttta agtgctgaaa cttttagcta tcatcatgga aaacatcaca
     7261 atacctatgt tacaaattta aataatctta ttaaagatac cgaatttgca ggtaaagatc
     7321 ttgtaagtat tattaaaact tcaagtggag gcgtatttaa caacgcagct caagtttata
     7381 atcacgattt ttattttgat tgtattaaac caagcacagg ctgtggttgt ggtagttcat
     7441 gccaaagcat ggatgctaat ttacaagcgg cattagaaaa agaatttgga tctttagaaa
     7501 atttcaaagc tgaatttatt aaaggtgcaa caggggtttt tggttctggt tggttttggc
     7561 tagtttataa tactaaaaat caaaaattag aatttgtagg cacttcaaac gcagctacac
     7621 caattatcga agataaggtt cctttacttg ttgtagatgt ttgggagcac gcttattatg
     7681 tagatcatcg taacgcacgc cctgcttatt tagaaaaatt ctacgctcat attaattggg
     7741 aatttgttgc gaaagcttat gaatgggctt taaaagaagg tatgggatca gttagttttt
     7801 atgctaatga acttcaccct gtaaaataat ttttaatcct ttttatgtta gaatgaattt
     7861 tgacattaag tcaaaattct atacaaaaag gagtaaaaat ggataattct ttatctgcat
     7921 acactcaaaa atatgacaaa gaaggttacg gacttcaata tcctgacggt catgttataa
     7981 gattttatga gaggatctta aaatataaac taaacaaaat aagtggaaaa ttacttgatt
     8041 ttggttgtgg aaatggcgtt cattctaagt attttaaaaa tataaccggg gggggggtat
     8101 tgagccttat ggcattgata tagttcctag tttaaaaaag gtttgggaaa aagatccttg
     8161 cttagattct aaaaattttc acatcatatc tcctaattct agttttaaaa aactctttga
     8221 cacaaaaatg gattttatat ttgcaaatca aagtttatat tatcttacaa aacaagcttt
     8281 taaagaagct atacaagaat tttatgaatt atgcaacgaa gaggctatta tatttgcaac
     8341 catgatgagt gataaaggtt atagcatgta tgaaagagga aaacttatgg ataatgggtt
     8401 gtgtgaagta aaaggatgcc caagtggtag attgagtggt tcttcatata tacgctttac
     8461 taaagatata gaggagttaa aagaagattt taaacctttt aaacctttgt tttggggaga
     8521 ttatgaatta attaacctgt ataattttga aggcagtgtg gagcatttta tttatatagg
     8581 acaaaagtaa gtgctttagc acttactctc ctaaacttgg agtcatttca ataatcttcc
     8641 aaggaagtcc ttgagaatta agttcttcca taaaaggttt agcatcaaat ctttccatgt
     8701 taaatacacc ttttccttgc caaattcctt tggcaattag ctttgcgcct atcatagcag
     8761 gaacacctgt ggtataactc acagcttgtg cgccagtttc tttataacat tcttcatgat
     8821 tacaaacatt ataaatataa acttgtttat cttttccatc ttttaggcca cgaatcacac
     8881 aacctatatt agtataacct ttagtgcgtg gtcctaaact cgcaggatca ggaagtaggg
     8941 tttttaaaaa ttctatagga atgatttctt tgccttgatg tatcacaggt ttaataccca
     9001 acattccaac attctcaagg catttcatgt gggttaaata gctttgtcca aaagtcataa
     9061 aaaagcgtat tctttttaaa cctttgatat tttttaccaa actttcaagc tcttcatggt
     9121 aaagtaaata actatctttt acgcctactt ctggataatc ccattccatt ttaatttcca
     9181 taggctctgt ttctatccat ttgccatttt cccagtaacg ccctttagca gaaacttcac
     9241 gcaaattgat ttcagggttg aaattggtcg caaaagcata accatgatca cctgcattgc
     9301 aatctaaaat atctatataa gaaatttcat caaataaatt ttgttgggca taagcacaaa
     9361 aaacatttgt tacccctgga tcaaatccac ttcctaaaag ccctaaaatc cctgcttgtt
     9421 taaattgatc atttcttgcc cattgctctt tgtattcaaa tttagccaaa tcaggatgtt
     9481 cgtaatttgc tgtatctata taatcaattg ttgcttttat acaagcgtcc attaaactca
     9541 aatcttgata aggcaaggct acattaagta aaatttctgc tcctgttttt ttgataagtt
     9601 ttacaaccgc atcactatca tcagcatcaa tttgtgcagt ttcgatttgt acccctaaac
     9661 gctctttgat aaaagcagcg atttcatcac atttactttt tgttctacta gctagagtga
     9721 ttttattaaa agtatcagaa ttcattgcgc attttacagt agccacacgg cttactccac
     9781 ctgcacctat gattaaaaga tttttcatga aatttatcct taaaagattt ttagaaattt
     9841 tagctaaaaa ttaataatat caaaatttat tttttcttgt aaatcgtaat ttgaacttag
     9901 tagcatgaaa aattctatat ttttatatct taacttaagt ctataaaaag ctcctaaaaa
     9961 ttctttttgt aaaatttcag cttcaaagcg acctcctatt ttaagttctg cataaccaaa
    10021 aatataattt tttgaagcta tccaagcaaa aaattcatct tttaaatcaa gtttttcttc
    10081 tatgatattt aaatcaggta aaatttgagc acttttgaaa ttagggttaa aataaagttc
    10141 cttaggactt gcatgagcta aaatttttcc tttatctaaa aatgcaattt gatcagacat
    10201 gcaataagca tcttcaatat catgagttac cataatagct gtaatgtctt gattttctat
    10261 catttttttc aattctcttc ttaaatcttg ttttaaattc tgatctaaat tagaaaaagg
    10321 ttcatctaaa agtaaaagct tgcatcctct tgctatagct ctagcaaaag ccactctttg
    10381 tgcttgccct cctgaaattt catcgatttt tttatatctt aaatctttaa tttcaaaagt
    10441 tttaagcaag tgatttaaaa ttttattttt atctttttta tcataaagtg cgaaaagtat
    10501 atttttttca acatttaaat gaggaaataa agcgtaattt tgaaacatca aagccacttc
    10561 gcctttacaa taaaataaat cacaagaact agcttgctca agttgtgcaa taatccttaa
    10621 aagcgtgctt tttccacttc cactacctcc caaaatactt aaaaattctc cttctttgac
    10681 atgaagatta atattttcta aagcttgtat ttttccaaaa tttttagata aatttttaat
    10741 ttctaacatc atctttcctt gtgattttat cgatccaaac aataataatt aaagaaagaa
    10801 aaacaataaa caatgaaggc aaagccgcat cataaattct ttcatcactt gcaaaccaaa
    10861 aggctttaac acttaaagtt tcaaaaccaa aaggtgctaa gattctgctt aaaggaagtt
    10921 ctttgatcgt atcaataaaa acaataataa aagccaaaaa tagaaaatgt ttcattaaag
    10981 gtgtgtgaat tttaaaaaat aaaataaaat aactagctct taaatttaaa ctcgcttcat
    11041 cgatatttag atgaattttg ttataacccc cttctaaaga ataaattgca ctagctaaaa
    11101 aacgaatgat ataagcaaaa acaagaataa gtaaagaatt tcccaataag ttcatatgaa
    11161 gaattttatc caaaaataca aagagtacta taatactaat ccctaaagca gctgcaggta
    11221 tagaataacc caaagaactt atctttaaaa taaataaatt aaaaaaatga tttttaacta
    11281 ttcttgaaat aaacattaaa aaataagcta aaaaagcagt gattaaagca gtgattaaag
    11341 ctaagattat agtttgcaag ctgatgatat aaaattgtga ttcaaaaagc ttatgatctt
    11401 ttaatcccca ataaactaac caaataaaag gtaaaataaa acccgtaaaa gcgattgtaa
    11461 aacaataaat acaggataaa atttgtttaa tgcgatttaa tttccttttt ttaataaaaa
    11521 gagctaaatt ttgattaaaa ctataatgat gtttgttttt ataataataa tccacataca
    11581 taatcaaaaa aacaaaaagc attaaaatgc ctgataaaac gctagaagaa taggaatcat
    11641 ttaaatcata ccaaagttta aaaattccag ctgaaaaagt atctatccct aaataagcac
    11701 ttgcaccata atcacttaaa gtttccatta ataccagtaa agctccagaa aaaatagcgg
    11761 gtcttgcgct aaaaagtgcc acgcgtataa aaattctaaa ttcggaatgc ttcatgattt
    11821 tagctacttc ataagcttct ttagcttcgc ttttaaaagc tgttttagca aacaaataaa
    11881 tataaggata taaagaaata cccaaaacaa aaataacacc gtaatgatta aaaaaatcta
    11941 tcctaaagcc aaaattttca tgaaaaaatc cttgaaaatc cataattcca acatagacaa
    12001 aagctaaaat ataagcagga attgccaaag gtaaaatcaa taatttttct aaaattttac
    12061 aaaaataaaa atcataattt gcaatcaagt aagcagaact tacacctaaa atcaagctta
    12121 aacacaatac cccaacacta attataaaag tatttttgat gaattttaaa aataaataat
    12181 caaaaaaatg actcaaattt tctttaatag atgaaaattc agctaaattg cttgtattga
    12241 aattttgaaa aagaatataa aaaagctcag caaaaatacc aaaaataggc aaagcaataa
    12301 aaagggcaag taagattgcc cctaatttat agtattttaa ggttttatac attatctaaa
    12361 accgacttga tcataaattt taacagcctc tttaatattt tctgctattt gactcacagg
    12421 tatttgatct tctttgaaag ttccaaaatc ttttaccgtt tgacttaatt ctatatcatt
    12481 tcttatagga aattcataat tgctatcggt gagaattttt tgaatttcag gacttagcac
    12541 aaattccata aattttttag ctgattcttg atttttactt gattttgtca tagcaatacc
    12601 gctgatgtta atatgtgttc ctctattgtc ttgattagga aaaataatac ctaaagaatt
    12661 acccacttct acatcttttg gatttttaga attctttaaa agccctatat aataagtatt
    12721 cataaccgca aatttagcct cacctgcaaa tacttgtctt gcttgatctc tatccccacc
    12781 ttttggactt gttgcaagat tatcaagtac gcctttagcc cacgctttag catttttatt
    12841 tccatcattg gctatgatag atgccaaaag agttttgcta taaggagctg tagcacttct
    12901 cataacaatt tctcctttaa attcaggttt tgctaaatct tcataatttt tcattttact
    12961 aatgtcgata tttgcatttt tattataagc aataattctt gctctttttg tgattgcaaa
    13021 ccattcttta tccttatctc ttaaatgagc aggtatgaac tcttctaaat actttgatga
    13081 aacaggagat aaaagtccta aatttttagc ttctgtaaga tttgaaatat cagctgtaat
    13141 gaaaacgtca gcaggagaat tgcttccttc aagagaaagt cttttgataa gctctgaagc
    13201 tttagcttgg gtatgattga ttttaatacc tgttttttct tcaaattttt ttatgatctc
    13261 aaaatcagca tcataatgtc ttgccgagta gatattaagc tccgcagcac ctaaaaatga
    13321 aaaagccatt aaaaatatag aaaagatttt tttcatattt tatcctttat tgagaattat
    13381 actcggtttt attaagatct ttatcggtat gagagtggtt agagcaagca aaagcaaagc
    13441 caacgcataa taaaaataaa actatttttt tcatagatta aatccttttt agatattttg
    13501 ataagaaata ttaatattaa aaagtaaata tgatgtaatc tttatatttt tatattcttt
    13561 gtaaagaata aaagaggatt atttttaaac atgttgataa atttatgatt ttaataaacc
    13621 cttggttaaa taaaattgat taaaattttt cttttaaaag gttggcggca tgttttcttc
    13681 gttttttgca agtaaaaaat gggctttatg ggcttattca ggactttttt tactcttatt
    13741 ttttcttttt attcaaacaa gtcttaatgt tgctataaat tcatggtata gtgattttta
    13801 caatgtctta caaaagccta agatagaaat tttagattca aattcaacgc aaaagacaga
    13861 aattaatttt gaaaacaatg ccactttaat tcaagaggct gaaaaaaaag cggagcaaaa
    13921 tcttcaaaaa gctaatttta ttaataaagg tgcattatac tattatcaaa atttattaaa
    13981 atattttttt aattctagag ctatgattga aaaaccaaat tattcggcaa atgattttta
    14041 tgctttgatt ttggtttttt tagctattgc tatcccttat gttttaattg ctacgattaa
    14101 catctatttt gctagtgttt atgcttttaa gtggcgtgag gctatgactt tttcttattt
    14161 aaaattttgg aagaataaag atgacaatat agaaggaagt tcacaaagaa ttcaagaaga
    14221 tacttataat ttttctaaaa ttgtagaaag tttaggactt agctttataa aagctttgat
    14281 gactcttgtg gcatttattc cgattttatg gactttaagt gatgttgtaa gtaaagcttt
    14341 atttgcaaat ttaagtgaaa attcttcttt ttatttttta aaaaatattg atggtttgct
    14401 tgtttatgtt gcgcttttga tttctttggg tggtttggtt gtatcgtggt ttataggcat
    14461 taaacttcct ggacttgaat ataacaatca aaaagccgaa gcagctttta gaaaagagct
    14521 tgtttatgct gaagacaatc gcaaagaata cgctaaaaat gagaccatga tagagctttt
    14581 tacagggctt aaatttaact ataaaagact ttttttacat tatggatatt ttaatatctg
    14641 gcttatttta tttgagcaaa tgatagttat tgttcctttt ttaatcatgg caccaggact
    14701 ttttgctggg gctataggac ttggtattgt aatgcaaatt aacaatgcct ttgatcaggt
    14761 acgaagttct tttagtgttt ttatcacgaa ttggacaacc atcactcaac ttagaagcat
    14821 atacaagcgt ttaaaagaat ttgaaaaaaa tatttcttat aaatcttagt ttttgtattg
    14881 taaaatacaa gaagaaatta aaaatgttaa atttactttt aattgtgtat aataagattt
    14941 aataatattt atttcttaag gagcttcatt ggaccccagt caggttttag atttaaacca
    15001 aacttctaca gtatcttttg atgcaggata ttctatactt atgattgttg ttgcacttgc
    15061 tttagtgttt ttaaatggtt tttttgtttt atctgaattt agtattgtta aagtacgccg
    15121 ttctaagctt gaagagatgg taaaagaaaa aaaagctggt gctaagaagg ctttagaagt
    15181 tacttcaaga cttgatactt atcttagtgc ttgtcagcta ggaatcactt taagttctct
    15241 agcccttggt tggataggtg agcctgctat tgcaaaaatg ctagaaattc cacttattaa
    15301 ttttggtttt agcgcggtta ttattcatac tatagctttt atcattgctt ttagtattat
    15361 tactctttta catgtagttt taggagaact tgtgccaaaa agtatagcta ttgcagttgc
    15421 ggataaagtg gtattgttta tagctagacc acttcattgg ttttggatac tctttttacc
    15481 ttgcattaaa atttttgatt ttttagcagc tataagtttg aaactttttg gaataaaacc
    15541 tgctaaagaa agtgaactaa ctcatagtga agaagagatt aaaatcattg caagtgaaag
    15601 ccaaaaaggc ggagttttag atgaatttga aactgaaatt atacgtaatg ctgtcgattt
    15661 ttccgatact gttgctaaag agattatgac ccctagaaaa gatatgattt gtctaaacaa
    15721 gcaaaaaagt tatgaagaaa atatgcaaat catttgtgag cataaacata ctcgttttcc
    15781 ttatattgat ggttctaaag atactatttt aggtatgata cacatacgag atataataca
    15841 aaatgaatta agtggaaaaa gccagaattt agatactttt gtcaagcctt tgattttaat
    15901 tcctgaaaat ataagtattt caaaagtact tgtaatgatg aataaagaac gttctcatac
    15961 tgcattagta gttgatgaat atggcggaac tgctggaatt ttaactatgg aagatatcat
    16021 ggaagaaatt attggcgaga ttaaaagtga acatgaagaa gatagctata aaaaacttgc
    16081 tgaaaatatc tatgaattcc aaggacgctg cgatatagaa accgttgagg aaatgctttt
    16141 aataaactat gatgaggatt tggaacaagt tactataggt ggatatgtat ttaatctttt
    16201 aggacgctta cctatagtag gagatcgcat tgaagatgag ctttgttatt atgaagttaa
    16261 aaaaatggat ggaaattcta tagagcgtgt taaggtggtt aaaaaaacta ataaagatga
    16321 agaataagcc tttttcggct tatctctttt tataaatttg gtttttaact tctatgcact
    16381 caaaaccttt tttatctaga gtaactacgc gtaagtatcc accattatct actttaccct
    16441 cgcataaaaa cactcttttt gctatttgca taggaagttt ttctttattt ctatgtccaa
    16501 aaatttgata aagattatcc gaggtaaaat tgcaaaattg atttgctact ttttgactgt
    16561 cttcatatct gcctactcca taaataaagt catgacttgg tataaaactt attgtttcag
    16621 gtttagaagg tataaaattt acccctccat gtgaacaaaa tatgaattta ttttggaatt
    16681 tatagtataa acattctttt agatgaggat aaagttttct agcatctctt ggagtaagtt
    16741 tttcttttct aaaatctttt aatgtatttt cattaaattc tttagagttt gataattctc
    16801 catttgccca ttttataaga tgtctttcat gatttccttc taataagcat acattttctt
    16861 tttcacaaat ttttaaaaga aattttatca ctttgccatt ttctatacct ctattgatat
    16921 aatctcctaa aaatatataa aattcatctt ctttgattgt tttaatatat tctttcaaaa
    16981 catgatagca accttgtaaa tctcctatat gatgaatttt tttatactta cttaaatttg
    17041 gcatttgata aagacatttt ttccagtctt ttgattttaa aatcagatat tttttttgag
    17101 tttttttaag taaatcttgg gttttttcta aaagagcata agggataata tacccatttt
    17161 ttttagcctc taaaagattt ttttcttgac attgttttaa agagctatca aaagcaataa
    17221 catacatttt ataacggtat tgtttggcta agtctttata aatttttaat gtttcattgt
    17281 aggcatttat gatgcaaaat tcaccttttt gcatacgcat ttctaaaagt ttgagtaaaa
    17341 ttttactcaa atcttcatca ttcttaacat ttaaaatttt atattcactt actatatttt
    17401 taatacttcc tgataaaaga cgcaaagcat ttaaatcaag tgtataattt tgaagtttat
    17461 tattttttat aaattcttct tgccctgcgt gataatttcc tcttaaaaca agtaaaattc
    17521 gcacattctt tgcctagatt ttctttaaaa attcagtttt taaaacaata acaccgaatt
    17581 tatctacctt ggcttcgatt tggctttctt tagaagagag tttaatattt tttatagtag
    17641 ttccacgttt taaagtcatg cttgctcctt taaccttaag atcttttatc acgctcacgc
    17701 tatcgcctgc gttaagttct gtcccattag catctttagc catttttttc ctttctttga
    17761 tctaaaatat ttaaaatttg caccactaaa gcaaaagcca tagctgtata aatatatgct
    17821 ttatcaatat gaatatcaaa actttcagca attaaaataa aacctattaa aaccaaaaaa
    17881 gtcaaggcta aaattttaat actcggatac ttttcaacaa aatctgctat aggcttggaa
    17941 gcaaaaagca tcacagctac tgcaataata acggcgataa tcattatagt tacatcttga
    18001 gcaattccta ctgctgtaat aacactatca agtgaaaata ctatatcaat cacagcaatt
    18061 tcagctacaa ctatccaaag cttgttactt accttaaaat gactctcact ttcttcttga
    18121 tgaaaaattt gttctttaat ttctttaata gactttacaa ttaagaaaag tccacctaat
    18181 aaaagcacta aatctctgcc tgaaatttca ttacccaata cactaaacaa aggcgttata
    18241 agctgcatca cccaaaaaag agataaaaga agtaaaattc ttgtaatcat tgcaaaagct
    18301 aaacctaaaa tacgccctct atcacgatat tcaggaggta acttactcac taaaatagct
    18361 aagaaaatga tattatctat ccctagcaca atttcaagag cacttaaggt agccaaagta
    18421 atccaagcat cgatactaaa aacccattca aacataaatt tccttgaaaa atttttaaat
    18481 ttttttaaag cgatatttta tagttttaaa gcaaatacaa tcatttaaga aaaatttcaa
    18541 tcacacttag aggtaaaatt tcatgttcta aagcatgaat ttttgcttta aattcctcaa
    18601 agctcaaatt tcttttctca aaagcttttt gagcgataat cattccacca tcaagctctt
    18661 cgttgaccca gtgtacagtc actccagcta ctttcatatc gctttcataa ctttctttaa
    18721 tagcatgtgc tcctttaaaa agtggtaata aagatggatg aaggttgatt gctttaatgt
    18781 tttttgtaaa aacaggactt aaaattctca taaaacctgc caatacagta agatcagctc
    18841 cactttcttt gattttttgc actaaaatcg catcaaattc ctcacgagta ttgtaagctt
    18901 tatgatcgac aattacacta tcaagaccaa atttttttgc tctttgtatg ccaaaagcat
    18961 cttttttatt gcaaagacaa agtactattt cataagtatt tgctcctatg gtttttttat
    19021 gaagtttttc taaaatattt tccaaattac ttccatttcc actaaaaagt acagctaatt
    19081 ttacaagcat tttaatcctt tgataagttt taaagcatca aaactatttt tattaaattt
    19141 atattttttt gcaacaagtg catgagctaa agtagcattt tttgctgcct ctaaagcact
    19201 aaaaccaaag cctaaatgcg cagcaatcat accacttaaa acatctccgc ttccaccttt
    19261 agctaaggct tgatttccta gatttacaac aaataatttt tctttttgta taatgatagg
    19321 gtttgctcct tttaaaacaa ggacacaatc ataattttgt gaaaattttc tagcatagaa
    19381 aaagcgattt ttttgtaatg cttctatatt taaatcctca tcaaaacaca ttttataaag
    19441 tcttataaat tcttttggat gaggggttaa cacgacatct tttctattta aatacccaag
    19501 caaagattca cttaaaaagc agtttgcgtc taaaactaaa ggagtgtttt gtaaaatttc
    19561 atctttcaaa aaatataaat tttcaagccc catgcctaaa gcaatagcac ttgcattatt
    19621 ttcaattttt tcttttagca tcaaaagagg tgagaagctt ttttgcgcta ccaaagagac
    19681 aagtcctgct ccaaaattta aggctccaag tcctgctaaa gttccagcgc ttgcattagc
    19741 aactatataa atatgaccaa aatttccttt attggcattg atttttctat ctatagtttt
    19801 taaatctttt ttttcaagta aaaaaacttg agaattggga tgaaattttt tagtactgat
    19861 acctaaatga gctattttaa tttttcctac aaattcctta gcaaaatctt caagtaaaat
    19921 ttcctttaaa actcccatgc aaagtgtaat atcagctttg aaacaaggat aaaatcccaa
    19981 atttgttggt atgtcacaag caatttttaa agccttgctt tgattagctt tttgaagtat
    20041 caaacttgct ttttcatcta agcaacgatt tgaacctgtg cctaaaatac aatcaattat
    20101 aatatgaaat tttttaaaat caggctcttt ttgataaaat ttaaaagcgt aattttgtaa
    20161 aattttctct tgttttttaa aaagtgcatt ttctttaaaa cctattttat aagctttagc
    20221 atgttttaaa tttcttaaag ccactaagcc atctgcacca ttgttaccgc ctcctaataa
    20281 aaaaagtatt tttacttttt taatcttgta ttgaatacgg atttttttag cttgtttttt
    20341 aataagtttg gctaaattta atcccgcatt ttccattaaa ataagctcat ttaagccttt
    20401 atttatagca ttttgttcta aattttttat attatcaata atagctttca tagtcttttt
    20461 tcactaaaaa atatatattt ttttctcttt cttcttcaaa ttttttcatt ttaggtaaaa
    20521 atttctgaat taaagcacga aaattcttaa aaccataatt ttgtggatga aaatctgaat
    20581 atttacggtt catattggta cggatctgag catattcagc acgtcctttt tcatcaataa
    20641 gttgttctgt gatattaatc aaagctctta aataatcctt gcttaaaata tcttcttttt
    20701 tactctcatt cttgtctaaa taaaaaaatt cactaaaagc attaacataa gattttatag
    20761 acttttcaag ccccattcct ataacttgtt ttttattttc tcttaatttt tgaatcagtg
    20821 aagtataatc gctatcacta gaaacaatca caaaaatatc tatgtttttt tcataaaata
    20881 tagacatgat ttcagtgatt aaatacatat cacttgagtt tttattagct gcaaaattga
    20941 attgctgcat agcgattaaa gaatattcag caatttgttc cctccagcct tgtatatttt
    21001 tttgagtcca atccccataa atgcgtttga tgataacttc tccataatct gaagcgatat
    21061 caaaaatact tttggcgtat tttgcaggga tattttctgc atctataaaa atagctatac
    21121 ttttattttc cattttaaat ccttgctcta aagcttaaag cttctaaaat atgcatttta
    21181 ttaatatcaa cactttgttc taggtctgct atacttcttg aaacttttaa aattttattg
    21241 agcgatcgta aagaaagatt atagcgtgaa attgccaaat ctaatgtatc tttagcatct
    21301 ttttccaaaa tacaaaaatg atttaaatcc tcatctttta atttcccatt aaattctttt
    21361 tgtcctcgtt ttttaccaaa aataaaagct tgtaaaattc tttcgctcat ttctttagaa
    21421 cttatacttg atttatcatc tttgctgatt tcatccatag ctacataaag atcaatccta
    21481 tccataatag gagctgaaat gtgattttta tattttttga tctcattttc actgcaaaca
    21541 caagaaagat ttttagaaaa taaattcccg caaggacaag gattttgagc agctataaaa
    21601 ctaaattttg tttcataagt gatcttagaa tttactcttg aaatatgaat tttatgatct
    21661 tccaaaggct ctcttaaact ctctataact tgcttgttaa aatgtggaaa ctcatcaaag
    21721 aacattactc cgccatttgc aagtgctatt tctccaattc tagcattttt tgctcctcca
    21781 ccaaaaatac ttgcccttgt agaagtatga tgaggatgac gaaaagcacg aattttagta
    21841 aattcacaat cctttgaatt taaagacata taggcatttt gcatcaaaac ctcacttaga
    21901 ctttgaggag gcataatata aacaaggcgt ttggcgcaca tgcttttacc acttccggga
    21961 ctgccttcaa gtaagatatt gtgcatgcct aacgcagcta tcatacaagc tcttttagct
    22021 ttttcttgtc ctttgatatc tttaaaatca agtttaaatt ccagattttg taaaaaaatt
    22081 tcgttttcta tttttaaagg attggtaaat aaagggtgat tgtgtgaaaa ttgaaattta
    22141 atataatttt tttccttaaa aaactctatt gcttcattta aattttcaag tccataaacc
    22201 tctaaatttg gtatcataga agctttttgt gctatacttt ttggaacaac tattttagct
    22261 ttttcaattt tagcagagag aaataagagt aaagaaaaaa gttcattcgt gcttttaata
    22321 cttccatcaa gtcctaattc tcctactaca aaaaagtcac ctaattcttc attttgcaaa
    22381 aggattaata aagcaatagc taaatcaaaa tgtgagcctt tttttggaat acctgaagga
    22441 ctaagattaa tggtaatttt tttagcaggg aaagcaaaat cacagcttaa aagtgtagct
    22501 ttgatgcgct ccacactttc tttaatcgcc acactcgcaa gccctactat gcttaagttt
    22561 ggcaaacctc ttgtaaaagt ggattctacc tctataatgt ctaagccttc atgaaaactt
    22621 atgcacttta gctttttcat ttctcttttt tgtgattttt cttctttttt taaattcttt
    22681 atcgaatttt tgacgcttcg caaaagaaat tttttctata aataaatgtc catttaaatg
    22741 atcgttttcg tgttgaatag ctacagctaa aaaacctttt gcttcaagtt ctttaaattc
    22801 tccaaagcga tcttgatatt ttagtaaaac atgattatag cgttttacct cttcaaaaaa
    22861 atctggtaca ctcaaacatc cttcggtgca agtaatcatt tcttcatcta aaggaataat
    22921 ttcagggtta ataatctcta gcaaatcttc ttttttttgt tcatcatttt cattaaaaat
    22981 attaacaagt aatacacgca aaggaacatc aacttgaata gccgctaagc ccactccatt
    23041 acttgctatc atagtctcat acatatcatc aagtagatta tgaagttctg catcaaattt
    23101 atttacagtt tcagagctta aaaaaagttt aggattagga taagtgataa tttttctaac
    23161 cattaaagaa cctttatttt aaatgatctc caaagaaatc atttaaaact tttttctaaa
    23221 accttatcaa tcagtccata ttctttagct tcttgtgctg acataaaaaa atctctttct
    23281 gtatcttttg ctatttttgc aactttttgc ttggtatttt ttgctaaaat atcattaagt
    23341 atagttttaa gtcttaaaat ttctttagct tgaatttcaa tatctgttgc ttgacccctt
    23401 gcaccaccta aaggctgatg gatcataatg cgtgaattag gcaaagcaaa acgctttcct
    23461 tctgcaccac aacttagcaa aaacgctccc atagaagcag cttgtcctat acaaattgta
    23521 caaacattag gcttgatata attcatagta tcataaatgc taaagccact tgtaattaca
    23581 ccgcctggag aattgatata aagataaata tcttttgcag gatcttcggc ttctaaaaaa
    23641 agaagttgtg ctacaataga agaggcaagt tcatcatgaa tttcgccact taacataata
    23701 attctatctt ttaaaagacg cgaataaata tcataacttc tttctccacg gcttgatttt
    23761 tcaataacat aaggaataaa cattatttat cttctttctc ttttttattt acttttttcg
    23821 atttttctgt ttttggcata aaaatatcat taaaaagttt ttcttcgatt aaagccattt
    23881 ttacagcagg taaagcccct tgttttttat agttttctaa atgttctttt ggattcatac
    23941 cataacgata tgcttcaaaa taaattgctt ggatcaattc ttgatcattc acttcaatct
    24001 tacgcaattt tgcaagctca tcaatgataa aagtaagttt tacacttttt tgtgcttctt
    24061 ctttaaaaga atcgcgtttt tcttggtatt tttctttgtt tgctttaagc tcttcaattt
    24121 ctttttcgct gaaagtatta aaagctgcac gcatttgcat atcggtttct tgttctacta
    24181 tacctttagg taagtaaaaa ttatattttt caatcaaagc atctgcaaat ttacctttta
    24241 attcgtcatt tacaagtttg aaaagctttt catttttaat ttgttctttt aatttttcat
    24301 ctaaaacttc aatgctagct ttttcttcac ctggtaaaag ttttttaagc atttcatcat
    24361 caagttctgg aatttttagc tcttgaattt catgtaattt cactttaaat gttgcatctt
    24421 tgtttgctaa gtgagcgaca ctgtattctt taggaaaagt tactttgata tctttttctt
    24481 cacctatttt catacccacc ataccctctt caaaacctgg aatgaattgc ttagaaccaa
    24541 tttctaaaac ataattttca gccttgccac cttcaaaagc cttatcatct aaaaaacctt
    24601 caaaatcaaa ttttgcaaaa tcaccctctt gtaaagctct ttttgttttt atagcctcag
    24661 gggtggcaaa acgttttaaa agctcttctt ttttttcatc aatttctttt ttacttactt
    24721 ttggagtttg atattcagga attaattttt cataatcatc aagtttaatt tcaggcttga
    24781 aagaaagtat taactcggca ataatttctc catctttacg atcaaatttt tcaaaatatg
    24841 gttcacctac aagctcttta ctttcttttt taagctcttt taaagcacta tttacagcag
    24901 atttaaaaag attttgttct gcatcttggg ttaattctct ttcatatctt ttaagtacag
    24961 cgcttacagg aacttttcct ggtctaaaac catccatttt tacactttta gaagcttttt
    25021 ttgctaaatt ttctacttca cttttgatca ttcctgaagg aatttttaca ctagcagtcg
    25081 cattaacaga atctagttgc tttgccttta cttccatagt tttttcctta ataaaataaa
    25141 atttgctttc aataatagca aatttttcct tattacttgc ataaaatttt aaagtaattt
    25201 atgataaaat tgcaatatta cgttttatta aaatatagaa atattttgga gaaaaacttg
    25261 caaaaaaaat ttgaagattg cattaaaacc atgcttgaaa ccataggaga aaatccaaat
    25321 cgcgaagggc ttatcaaaac accaaaccgt gtttttaggg cttatgaatt tctcactagt
    25381 ggttatacac aaaatgttaa agaaatttta aatgatgctt tatttgaaag ctctaataat
    25441 gaaatggttt tggtgcgtga tatagaattt tatagtcttt gcgaacatca tcttttacct
    25501 ttttttgggc gtgcacacgt agcttatatc cctaataaaa aagtagtagg tttaagtaaa
    25561 attccacgcc ttgtagaagt atttgcaagg agattgcaaa ttcaagaaca acttactgag
    25621 caaattgcac aagctttaat ggaaaatgtc gatgcaaaag gtgtaggtgt agtgatagaa
    25681 gcaagacata tgtgtgttga aatgcgtgga gtgcaaaaag ctaactctac cactacaact
    25741 tcagcattac gtggaatttt cttaaaaaat gaaaaaacta gagaagaatt tttttctctt
    25801 attaactctg ctaaacaggt aagattttaa tgaatcttga aaaacttcgc tccaaacttg
    25861 gtaaagaaaa tttgagtgct atttttggag aaattacaaa aatttctgcc acaagcatag
    25921 agattcgtgg gcttaaaaca ggagttggag atatagtcaa actagtttcc aatgaaaatg
    25981 aaaatttaaa taccctagct atggtagtag aaatcaaaga acaatttagc tatttaagcc
    26041 ctttttcttt catagaaggt tttaaaatag gcgatcgtgc ttttataagt gatgcaggta
    26101 tgcaaatagg cgttagtgat gaacttttag ggcgtgtagt agatcctttt atgcgtccaa
    26161 aagatggcaa aggatccata gaagtaagta aatatatgcc tatcatgcgt gcacctattg
    26221 atgcgatgaa aagaggactt atcgaagaag tttttcctgt aggggttaaa accatagatg
    26281 cgcttttaac ttgcggtgtg ggacaaaaat taggcatttt tgcaggaagt ggagtaggaa
    26341 aatccaccct tatgggcatg atagttaaaa attccaaagc tcctatcaag gtagttgcac
    26401 tcataggaga aagaggacgc gaaattcctg aatttataca aaaaaattta ggtggaaaat
    26461 ttgatgatac agtgcttatc gttgccacaa gtgatgatag tgctttgatg cgtaaatacg
    26521 gtgctttttg tgcaatgagt gtggctgaat actttaaaga acaaggcaaa gatgtgcttt
    26581 ttatcatgga tagtgtaaca cgttttgcta tggctcaaag agaaataggg cttgcacttg
    26641 gagaacctcc cacaaccaaa ggttatccac caagcgtttt aagtcttttg cctcaactca
    26701 tggaaagagc aggtaaggaa gaaggtaaag gaacaataac agcttttttt actgttttag
    26761 ttgatggtga tgatatgagt gatccaattg ccgatcaaag tcgctctatt ttagatggac
    26821 atattgtttt aagtcgtgag ttaacagact ttggaattta tccgcctatt aatatacaaa
    26881 attcagcttc aagggtaatg agtgatatca taagccctga acacaaactt tgggcaagaa
    26941 aatttaagcg tttaaattcg cttttaaaag aaaatgaggt attacttcgc ataggcgctt
    27001 atcaaaaagg aagtgataaa gaacttgatg aggctatttc taaaaaagaa tttatgcaaa
    27061 aatttttagg acaaaaccct gaagaaagct ttgaatttaa ccaaacttta gagcttttaa
    27121 gtcaaattga tatgccaaat attcctctac ccccaactca aaatataaat acaggaagtg
    27181 caaccttgcc taatcctaat ttaaaataaa attatttgat aaaataatct ccatcaaaac
    27241 tgattaaaga atattttctt tcatcgccta tgctttgagt tagttcttct atgcttagaa
    27301 aacttagtgt atcagcttcc acatactcac gcacttcctt ggcattttta ttcgcactga
    27361 taagttcttc aaatgttggt gtatctatac cataagtatc aggaaatttt atctcaggac
    27421 aagctatggc aagatgaatt ttactcgccc ctgcagcacg caacaaagaa atgatttttt
    27481 tagaagtagt accacgtact aagctatcat caatcacaac gatttcttta ccttctaaaa
    27541 ccttatgcat aggattaagc tttagtttga cttttaaatt tctaagctct tgagtgggtt
    27601 ctataaaggt tcttcctaca tagtggtttc ttactattgc catttcaaga ggaatttgta
    27661 aatattgtgc aaagcctata gccgcactta ctccactatc tggtacagga acaacaaagt
    27721 ccgccttata agcaaatttt ttagctaaag cctctcccat ttttttacgc acttcataaa
    27781 cactcttacc ttccattata ctatctggtc tagcaaaata aatgtattca aaagcacaaa
    27841 tcctaggagt ttgggaaaaa agttctatgc tttcaaattt atcatttcct tgagtgaaaa
    27901 taagcatttc tccgggttta acatcacgga taaattcagc ttctataaga tcaaaagcgc
    27961 aagtttcgct agcgactata taacccttat ctttcaaacg tcctaaagat aaaggacgca
    28021 ctccataagg atctcttaca acataaagtt tatctttact tgctaaaaca aaacaataag
    28081 cccctacaca ttcttttaaa ctttcgataa atctatcttt tagactttct ttcttgcttc
    28141 ttgcgataag atgaacaaca ttttctgtat ccatattggt ttgaaaaata gccccatctt
    28201 gaatcaacct taatcttact tcttctttat tgactaaatt tccattatgc gctaaggcaa
    28261 tatcaccaaa acttgaagta gctgctatgg gctgtgcgtc gtttaagctt gaatttcctg
    28321 ctgtagaata gcgattatgt cctatagcga tttcaccctc taaagttttt aaattatcag
    28381 gattaaaaat ttgatttact tcacctttag ctttaatagt cttgatattt ttaccattgc
    28441 ttacactaat accacttgat tcttgcccac ggtgttgcat agcaaagagt gcgtaatacg
    28501 cataagtact agcatttttt gaattgataa ctcctacaac tgcacacatt ttaaattcct
    28561 aaaaaatcat taattgaata catttttgct tcttgtttgc taagccaaat agcgatttta
    28621 attgcacctt tagcaaaggt tgcccttgag gtagcggtat gattaagttc taaaaattct
    28681 ccgtcctcat aaaaacctac agtatgactt cctgctatat cacctcctct taaactcatc
    28741 acagcgattt catctttagt tctttcgcct ataataccgt ctcttccact cactcttact
    28801 ttttcaagtt ctaaatttct agcttttgct acactttgcg ctaaagtcat agctgtaccg
    28861 cttggtgcat cttttttatg gcgatgatgc atttctaaaa tttctatatc aaaatttctt
    28921 aacatttgac tagccttgct agcaagatag tttaaaactg caacacctaa agacatatta
    28981 gtcgcataaa aaataggcat aactttacta gcattttgca tcaaatgtaa aattttctca
    29041 tcaagtcctg ttgtacctat taccaaaggc ttgggcatag ttcttgcata atttaaaagc
    29101 tcatgagttc cacttgggga agaaaaatcg ataatcacat cacttttttc aaaaagttct
    29161 tctaaatttc cacccttatc ataaagtatt gaaatttgtg cttgtgtttg gcttttcaaa
    29221 cattcttcaa tctgttttcc catgcgtcct ttagcgccat aaattcctat tttaatcatc
    29281 tttttccttg aaaataaaaa acgaaattct atcatttgtt ttttaatctt ggctaagaat
    29341 atttttaaaa atagcatatt ataaattttt attaaggtaa aaggtattac aataatttat
    29401 tataaacaaa atattaacaa aggaaaaata atgttttata ttaagttttt agcacctatt
    29461 gtgtttgctt ttattatata cattattccg acacccgaag gagttagttt aaatacttgg
    29521 ctttatttta gtatttttat aggtttaatt attggattga ttttagaacc tattccacca
    29581 gccttaatgg gagtaattgc tgtaactata gcggttttat tcaaggttgg acctatagga
    29641 tctggcgatg ttcaaacaat cattaaagat tctattgcta taaaatgggg attagaagga
    29701 ttttctaatt ctgttgtatg gcttattttt gcagctttta ccatagggct tggattttca
    29761 aaaacaggtt taggcgagag aattgctctt tatcttgttt tcaaattggg taaatcaact
    29821 cttggtttag gttatgctat tgcgatagtt gatttcattt tagctccttt tatccctagt
    29881 aatgctgcaa gaagcggggg aacggtttat cctatagtta attctatagc ccctatgttt
    29941 gaaagttatg caaataaaaa tcctagaaaa ataggagctt atcttgtttg ggtaggtttg
    30001 gcaagttgtt gtgtatctag ctctattttt cttacaggac aagccccgaa ttctcttgcg
    30061 ctatctctta tatctcaaaa tggagttgga gtagttgatt ggcttggttg gtttttagct
    30121 tttttaccta tgagcatcat actttttatc atcactcctt tattggtata ttttatctac
    30181 ccacctgaaa ttaaaggttc aaaagagata gcttcttggg tagaagaaaa atataaaaca
    30241 cttgggaaaa tgccttacac ccaaattttt atgctcatta ttgcacttat aggacttaca
    30301 ctttgggttg gagctagttt ttttaaaatt aatgcgacta ctacagcttt aattatgatt
    30361 attttaatga tagcttgtaa agttattact tggcaagatt ttttatctaa caaagccgct
    30421 tggaatactc ttgtatggtt tgctaccctt gtaactatgg caagtgggct taaaaatgta
    30481 ggatttttag attatttagc tggtatttta ggacatcaat tgacaggatt taaacctttt
    30541 atagctacga ttttactttt aatgttattt tcttggctta ggtatttttt tgcttcagca
    30601 acatcttatg taacagctat tattgcgatt tttgtatctt tggcaagctc aattgaagga
    30661 gctgatccgt ctttgattat gttaattctt gttttgccta tgggttttat gggtgttatc
    30721 actccttatg gaacaggatg ttctccttta tggtttggaa gcaattatat caaaggtccg
    30781 caatttttct tattgggagg aatttttgct gctatttata tggcaattta tcttgccata
    30841 ggaattcctt ggatcaaatt tatcatgcct tatcttagtt ttcattaaga gatttttctc
    30901 tattttactt ataaaataga gaaattatcc ctctttttat gaaagattta ttgttttttt
    30961 aatttgtgca aattctttaa caattttgct tcttctccta aacctttgct atgataaaat
    31021 tttaaatctt tgctaagata tttttgctct acccaaccac caaaatcatg cggataaaga
    31081 tagttttgtt tttcttgatg attgttgtta agataattag gtatttctaa agcttcattg
    31141 tttcttacat aagttaaagc ttcattgata gctttatagc ttgcattgga cttgattgca
    31201 cttgctaaat aaactacgca ttgggctaag ataattcttg cttcaggata gcctatattt
    31261 ttaaccgctt ctagggtaga aactgctaaa tttaaagcat ttggatcagc atttcctaca
    31321 tcttcgcttg aaaaaattac caaacgccta gcgataaaat ctgcactttc tcctgcatca
    31381 ataagtcttg caagataata aattgccgca tccacatcac ttccacgcaa actttttatc
    31441 atcgcacttg ctaagatata atgcgtatct tttgagctga caccttcact atttatggta
    31501 ttgcgaagtt ttttaagatt agaaaggttg atatgttttt catccaaaac taaaacaaat
    31561 tcaagcaaat ttaacatagc tcttgcgtca gcacttttaa gtaaaaaatc tctagcttct
    31621 tcatcaatac taaatttcat tttttcttgt acgcgtgaga gcaaaatttc tagttctttt
    31681 actcctaaag atttaaattc aaaaagcatg gagcgacttc ttataccaga acttaaaaca
    31741 aaatatgggt tttcagtact tgcaccgatt aaaattaaac gataattttc catagggatt
    31801 aatagcattt cttgttgggt tttgctaagg cggtggattt catcaataaa aattaaaggt
    31861 ttataaagac tatttttata attgtctaaa atctttctaa gttcttcgag tttaaaattt
    31921 cctccatcaa attcataaaa atccaagcca aattcttttg ccacaactct agcaaaagtt
    31981 gttttcccag aacctgctat tccaaaaaaa atactatgag ggagtttttg taaagcagta
    32041 aattttttga aaatttctat aagctcatat tgccctaaaa tatcatcaaa attttcagga
    32101 cgaaaggtta aagctaaact cattaattta aatccatatt tgaaaattcg ctgtcattaa
    32161 tttttagttg aggattagct aagctatcgt aagataaatt tagaaaaaag ttattgtttt
    32221 cttttaaaaa atattgattt aaacctccat aatttttagc ccaaagaaaa attttgtcag
    32281 gctcatctga gctgataatt cgtaattttg cttgataagt gttgttaata tttaaattgc
    32341 cttgaaaact gatattttgt ttgtttttct caagaattaa attttgtatt tttagatcaa
    32401 g
//
LOCUS       DAPWAA010000010        32198 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.010, whole genome shotgun sequence.
ACCESSION   DAPWAA010000010 DAPWAA010000000
VERSION     DAPWAA010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 32198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32198
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.010"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..894
                     /locus_tag="RTF91_000443"
     CDS             <1..894
                     /locus_tag="RTF91_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDZ4943366.1"
                     /translation="TKRGLEQDNQAVKESVETVSVVESGNLTARITANPRNPQLIELK
                     NVLNKLLDVLQAKVGSDMNAIHKIFEEYKSLDFRNKIANASGNVELTTNALGDEIVKM
                     LKQSSDFANALGDESGKLQTAVQSLTTSSNSQAQSLEETAAALEEITSSMQNVSVKTS
                     DVITQSEEIKNVTGIIGDIADQINLLALNAAIEAARAGEHGRGFAVVADEVRKLAERT
                     QKSLSEIEANTNLLVQSINDMAESIKEQTAGITQINESVAQIDQTTKDNVEIANESAI
                     ISSTVSDIANNILEDVKKKRF"
     gene            complement(941..3307)
                     /locus_tag="RTF91_000444"
     CDS             complement(941..3307)
                     /locus_tag="RTF91_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein"
                     /protein_id="HDZ4943367.1"
                     /translation="MRILFLILLSFLHIFAFELVLNTGRENNQAFAVLHASNDLEFTC
                     QKFITEAKVHFECDIVGMVDNQLKDQSFSAFDLKFIQEAQKIKMIILPKMQARMFDTA
                     QNIYIDKELSLSNSHKSKAFTFVFAPELVPIRDYDGLNFNINFPHESLPYVGALDLNS
                     NPVIIPQSADINTYLRIKKEYDKANYNQVVTDAQNAINRYRSSIFTSEFMLYKLRAQN
                     KLYTQDPSMRDQQILEKMIDDAKNWMRTFTSDRNFSEVLHIMLKTYIALAQRADVEYI
                     MSILDNEQPNNYFTQLSKLDYADYIYNLNEKEKAVNIYENTYFNTKNLDLAARAAMSL
                     AKNLLLNEQTDKAIEYINTILKANPEYFGKDIPRSLELAKLFDQKGQFDISASIYEDT
                     FAKMSKLEPNYEETLKDLALVLSHTNRFGDAKKYLDLYMDDYLDGKYLDEIKKASDEV
                     FFALGDNNASFLHQRYTDLMKQYANKDENIVNKALDEDVALYYKEGNFSAILAYKDLI
                     ESKKIPNATQFLEKAAINDLKNAIKADNCINAANIFMRFSAYDIGQKIDNKKQMLACL
                     IRTSNVEQALDYIDKNYNEDSIFYGLQKASILFGNKQYSQVIKISKDIAHSRILKSDD
                     ENFKAYYLQFLSLLHLNDYNQAIKILQILESFPMNFSMVEAYDALLSYANDHNMQATI
                     LTYAPKAIDYQNFKGINLFSPSLEFMYLDTLAKINKNEESLAVLTDLLKLKLSDEDRA
                     RALYTQALTYERMQNTQAQKESLKQCLEIKTTSNWQNLCKSKNQILNQ"
     gene            complement(3329..4717)
                     /locus_tag="RTF91_000445"
     CDS             complement(3329..4717)
                     /locus_tag="RTF91_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HDZ4943368.1"
                     /translation="MLNNFLNLELLNISLSYPFLFLIVSAIVLLLCSGFWKFHRSFYI
                     GISSLSLIVSVFLILNNANAQGLEAKAFLATLNNDIISFCASLVILCFSFLYLLMQKE
                     ENQGEFYALFLFMIASLLLMVSSSNLVLIFIGLESSSLALYTLIAMRGSDNAISSAIK
                     YFSVAAVGAGFFVMAIAFIYLKTGTLDLSANLALKNEFQKDPMLLGAGVMIFVLCAIK
                     LSLAPFHFWLKDVYYAAHTNLVAFISVVPKVAMLVVIIRLFDFLNNTGFEYIIIVLTI
                     FSMFIGAFAALSQNNIKKMFAYSSVVHSSLVLVACIPLLKEQNFDGILLAIFGYWTLF
                     AFANYAVFMILSNYENNSYESLNGLLVKKPLTAFCLSISVLSLAGIPPFGVFWGKFMI
                     LNTAILNGYWYLALFVALSSVIMLYAYLKILIHALFIKNNRIHNIKFSFIQNFILAFC
                     VYANTFAILLML"
     gene            complement(4707..6194)
                     /locus_tag="RTF91_000446"
     CDS             complement(4707..6194)
                     /locus_tag="RTF91_000446"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HDZ4943369.1"
                     /translation="MLNYLIFFPLIAAFVVLLLNRGGVKVFSLVVSFMILALNLDIFA
                     DFLQGTSFDYNISFKILKFFSFHIGVDSIALVLMLLSSLMIFLSFLFLKVEQKALASC
                     IFFLEFAIMGLFSAKDGLLFYVFWEFSLLPLLYIMGVYGKDFRAGVKFFIYAFAGSIL
                     MLVALIYQAYLNYQLLNIFTFDLEIWKNNASAVNFTEQLLLFGAFFIAFAIKAPLFPL
                     HTWAPKVYANSPVLVSVMLVVFKMAPFGFLLFCLPLFPDASVYFMPLIIALCIVSIVY
                     NALIAYKTENIKELIAYSSISHLGVMILGIFSLNALGISGAVFYMFAHGVVTGVLFLM
                     IEVLYQRYHTHDIAFYHSLAKKAPLFSIFFMLILLASVSLPLTISFVGEFLILLGIAK
                     INLFYAFLAGLVIILGAIYMFAVFRKIFFMQGESVIEAFSLRLREVVALVCVVIIIFG
                     LGLMPNTLLKPIQKDVDNLIKTMNIRAVEQNTLDFLSKIGEANVK"
     gene            complement(6196..7986)
                     /gene="nuoL"
                     /locus_tag="RTF91_000447"
     CDS             complement(6196..7986)
                     /gene="nuoL"
                     /locus_tag="RTF91_000447"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HDZ4943370.1"
                     /translation="MQNLALISLFSPFIAFLFASCFALSEKKQFVGIICSLLVALSAF
                     CSLYLFFCNKAFNVSLFEWFAGVNFGFDIDAISLTMMSVVGIVATCVHFYSIFYMAHD
                     EGFNKFFAYLGLFVFSMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNNIYSFAAN
                     EAFIMNRIADLGMLLGIFWLYLQAGTLKYDEVFSMVQSLDHNVLILIAACLFIGAMGK
                     SAQFPFHTWLADAMAGPTPVSALIHAATMVTAGVYLVIRASTIYDLVPEISYIIALLG
                     AFVAIFAASMALVARDLKRIIAYSTLSQLGYMFVAAGLGAYSIALFHLATHAFFKSLL
                     FLGAGNVMHAMNDKLDIKKMGGLFKPLKFTAIFMCIGTLALAGIYPFAGFFSKDLILG
                     YSFISFHHGIFLVLLIAAFLTAFYSFRLLMLVFFTPSRHNEHPHEASKIALLAMSPLM
                     ILAIIAGFFEYSFFEYLSTKLVFIDAQNQIVMICASVAAILGVILAIFAYKNSWFKES
                     IEENKIHKLLSSDYFIPKFYHQFIVSKYESLCVILRHCDLYIFDRVVEKIAFYSQSIS
                     KKMIMPNSLNLMLRFLVAAFVILLILVWVV"
     gene            complement(7988..8284)
                     /gene="nuoK"
                     /locus_tag="RTF91_000448"
     CDS             complement(7988..8284)
                     /gene="nuoK"
                     /locus_tag="RTF91_000448"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HDZ4943371.1"
                     /translation="MIEKYFFVAILMFVIGLVGVLKRQNLIMLFISSEILLNSANLAL
                     VAASKMHNDLNGQVFALFIMGVAACEVAVGIALCVLWYRRKGTLELQSLKEVEA"
     gene            complement(8281..8799)
                     /locus_tag="RTF91_000449"
     CDS             complement(8281..8799)
                     /locus_tag="RTF91_000449"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HDZ4943372.1"
                     /translation="MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGF
                     YFLLDAEFLGVIQIIVYSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFGLVILSAVL
                     LLAMFIGFKYQSVSTDLALNDLALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAI
                     TLTHKELTKEKQ"
     gene            complement(8796..9437)
                     /gene="nuoI"
                     /locus_tag="RTF91_000450"
     CDS             complement(8796..9437)
                     /gene="nuoI"
                     /locus_tag="RTF91_000450"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HDZ4943373.1"
                     /translation="MKNYYLVDEKRKTPISTWEKILQALRRSVKLELFVGLFVMMREL
                     LKRNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNCIRMET
                     SLDENGRKKVSNYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRSYFGYKQDFL
                     TPIDKLKNQVEFEGAGSLRKDANLWVKKTPNYYDMMQERALESQNIQEQGENK"
     gene            complement(9447..10445)
                     /gene="nuoH"
                     /locus_tag="RTF91_000451"
     CDS             complement(9447..10445)
                     /gene="nuoH"
                     /locus_tag="RTF91_000451"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HDZ4943374.1"
                     /translation="MSDFAFFALETLIKCIIVIAVFASLAGLATYAERKVLAYFQRRI
                     GPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKFIFAIAPLISAICAFVSLAAIPMLP
                     EFTLFGMVIQPIVADINVALLFVIGTSGLCFYAVFLGGLASNNKWSILGAARGLVAII
                     SYESVGALALIAIVMLVGSFSLVDINNYQSDGFFSWLIFKQPLAFVLFVIALFIETNR
                     TPLCLTENDAEIVAGYGTEYSGLRWGMFFIGEYASMIAGAILVTLLFLGGFNSFWIIP
                     GWIMMIVKSSFIFFWYFWARAAFPQLRPDQVMKMCYLILIPLAVLNLLITALAVLL"
     gene            complement(10438..12900)
                     /locus_tag="RTF91_000452"
     CDS             complement(10438..12900)
                     /locus_tag="RTF91_000452"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HDZ4943375.1"
                     /translation="MTVKINGIDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLAC
                     RMCMVEADGKKVYSCNTKAKEGMVVESDLRNLWDERNEIMQAYCINHPLECGVCDKSG
                     ECELQNFTHKSRVNVQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESA
                     LKTVPRGGDSVDNSFKESMGKDAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTG
                     ALIGSKFQYTSNIWELKRIPASNPHSSDCELMYYDIKQSGISNQKEKIYRVSNDFAFA
                     SLNKAARFAFDTQNEANKDEKAFKELVELFEKNAIKNIKFNSFITNEEALILQNLKKK
                     FNLSLINEEALKFKEFLQEFIANSGEFYNANTQDILKSDFLVVAGTLLRYDAPTLSYK
                     INNALVMNKGSGLYFHPIEDVGIVKYSKNFISHTHKSGDEEQILYFLLQKFSQDEAIK
                     ANLAEFFISENKEIEESINEEVVEQVIEKDEEGNEIQKEVKKVVSKKVKKTIEVKRSV
                     FAKNLGIDEDKLEDLLLKKANFILVVGSDFYFHKKAKKLAKLLALIQSTTPFKVFLNP
                     MHTNTLGVAMICDLDESIQEGKILAYNEKGDFSFSYEEHANLASASLNQQEGTFLNYD
                     KRVVPTNAALEFNGYFLNDLANALGFDEEYTINYTKRLPINKGFSPIDFDHLENFYTN
                     GGECKRGYELNLECFKQEAKKEFISPSFENLSLKEDEILLYSANPSYQFGRFSNRASA
                     INEAIFLGVSENLAKEKNLSDKDLVKLKIKDKELSLSVRVDKDIKNGAFLPYFDEKLD
                     TLSFFDERFVVANLEKIGANHE"
     gene            complement(12897..13589)
                     /locus_tag="RTF91_000453"
     CDS             complement(12897..13589)
                     /locus_tag="RTF91_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943376.1"
                     /translation="MIYDNALCFLDMPSLKNKNLCEKIGANSINISCLEDKNLKAKFY
                     KCEIASLSFVLALLCKLSDEGQFYNLDEGYLSAESCFGEEEANEVLGFLKEAKYLIID
                     KNIPSYKDSENIKYFLYFLSAKYGLKILDSNETECDFKKATLSSLKELDNYDGLVLFR
                     ANLKDKNLHCSKQFLQISKCKDQSEVEILAKDFSFKTKLCLDENLQGTIAFLNHENNG
                     FDFTPIRIKEAK"
     gene            complement(13586..13813)
                     /locus_tag="RTF91_000454"
     CDS             complement(13586..13813)
                     /locus_tag="RTF91_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943377.1"
                     /translation="MRRVDLRKSKELFEDLTQIIKEAKQGEVLVVLFEIGDFSPVEKS
                     FSFVKEQGCELLNSLKFNQVDWTIVIKKERV"
     gene            complement(13810..15036)
                     /gene="nuoD"
                     /locus_tag="RTF91_000455"
     CDS             complement(13810..15036)
                     /gene="nuoD"
                     /locus_tag="RTF91_000455"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HDZ4943378.1"
                     /translation="MQIPSKLKPYYENIAFEQENSKMIINLGPQHPSAHGNLRLVLEL
                     DGEQVVKARPCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLC
                     GLEIPRRAAVIRMILLELNRIASHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKY
                     CGARLTHSSMRIGGVMLDLPENYLEEMLAFCDKFPNDLKDYEDLLDDNRIWRLRTENI
                     GVVTKEQALNWGCTGVMLRGSGVKYDIRKEEPYLLYNEVEFGVPYATQGDSYARYKVY
                     MQEFRESLKILRQCAALYKDTPPEILATHPEYVSASKEQILTQNYSLMQHFVLITQGL
                     KPPKGEVYVPTESPKGELGFFIHSDGTGRPYRLKARTPSYWHCAFFEEMLVGTYLADV
                     VAIMGNVNIVLGEIDR"
     gene            complement(15038..15832)
                     /locus_tag="RTF91_000456"
     CDS             complement(15038..15832)
                     /locus_tag="RTF91_000456"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HDZ4943379.1"
                     /translation="MMRKYSDKKNVQIQNYYKDRFYHAPHTIKSNVNESIFKDDFEVL
                     KTEVEILNSYVELDFWVIEIKKEDNVKTLQMLKTLGYLSFTEASAIDFIANKNGFEVF
                     YQLLNLEKKLRVRIKTFIGVKERLQSVAHIFKGANWSEREIYDMFGIFIVGHPNLKRI
                     LMPDDWFGHPFLKTYPLKGDEFARWYEIDKIFGKEYREVVGEEQRDSGFADDKDTLNF
                     ARLYHEVPKGGQKKEISFKQEYQEDEGVVFVKKAKRDEAKILEKRR"
     gene            complement(15829..16332)
                     /locus_tag="RTF91_000457"
     CDS             complement(15829..16332)
                     /locus_tag="RTF91_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HDZ4943380.1"
                     /translation="MAEHQVNYASGLPVVLTSVDKLVQWGRSNSLWALSYGLACCAIE
                     MMAAGGSRYDFDRFGTIFRASPRHSEVMIIAGTLCKKHAEFTRRLYDQMPDPKWVISM
                     GSCANTGGMFNTYSTVQGVDRIIPVDIYVPGCAPRPESFQFALMILQKKIRKEKASRK
                     MAPKRLV"
     gene            complement(16314..16703)
                     /locus_tag="RTF91_000458"
     CDS             complement(16314..16703)
                     /locus_tag="RTF91_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase subunit 3"
                     /protein_id="HDZ4943381.1"
                     /translation="MSHIDASHPYFGVFLMLVLASVIFFGLVFLASKIGNNFAAKNRK
                     KLGLGIYECGPIPIKQANKINSQFFIIALIFILLDIEVVFLFPWALIFKDLGWFGFLE
                     VFVFIVLLGVGFLYAYKKGAFAWQSIK"
     gene            complement(16816..17481)
                     /locus_tag="RTF91_000459"
     CDS             complement(16816..17481)
                     /locus_tag="RTF91_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDZ4943382.1"
                     /translation="MLKVCNLSKSYELKKHWYLKKEKHIIFDNVNFYLKENKNLIILG
                     KSGAGKSTLARILCFLENPSKGEVWYENLNLHKLDKNKQRLLRKQIQYCFQDQKIALN
                     PYKKIKNLIQDGLENFNLQKNDDLILEFFDFFNLKKQILEQKPYELSGGEATRVGLIR
                     ALVLNPRLLILDEITSALDIKTSKEIVTFLYNYQKKNNISYIFITHQSNLFYKFNHKK
                     LKL"
     gene            complement(17474..18184)
                     /locus_tag="RTF91_000460"
     CDS             complement(17474..18184)
                     /locus_tag="RTF91_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943383.1"
                     /translation="MKIRNLNISLKNNVLLKNINLDIKTGKTLMILGESGVGKSLLGK
                     ALVRLLDSNFTISFDELSFHDFCIFNFNKEQLREFRSKVALVLQDAELSLYPYLDIGN
                     LCHLVLKTHTKLKQKERKDYAFSYLYKLGFEDLDRLWHSYVNELSLGMARRVSLALAL
                     LNKPQILICDEITASLDKENVSKIISILEELKNTTALVCITHDLNLVNSLADEILMLE
                     KSDSNLYDLDEFLRYFHA"
     gene            complement(18181..18975)
                     /locus_tag="RTF91_000461"
     CDS             complement(18181..18975)
                     /locus_tag="RTF91_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ4943384.1"
                     /translation="MILFKILIILTPLIFLFLCALFAPFLAPFDILTTHLENLHQAPN
                     FTYILGTDFLGRDLFSRLLFALRNSLIIGIGASLLSIIFAFCFLLFARCFFYVFWMRV
                     LEFFLALPAFLLMMFFQSMITSNVFLMIFLIALIHWCFIARIIESELKRLENLDFYKA
                     NIVLGRTKFRAFFKDLMPILKTLIFTLFIFNIVHAIATEATLSFFGLGLGFEIPTLGT
                     LLSESSKAVFIGAWWMILFPLLSLLLLFLPLLWLGNFLQKIWGVRS"
     gene            complement(18962..19906)
                     /locus_tag="RTF91_000462"
     CDS             complement(18962..19906)
                     /locus_tag="RTF91_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ4943385.1"
                     /translation="MLKRLVFSIFIAFFSTFLCFILLYFSKGSIAYANGINSQSKEFI
                     QRIEQNLGLNKPLLEQYKIWLFKALKGDLGVSFLSGEKVTKLIKERIFNTLILGFSAL
                     MLLFLLSIFLALLGYYYKESFIDKIITFLAFNFFALPPFVLALFFVLIFGIFWKVLPV
                     MGSSDIGFEDDFLNRLEHLILPVLVLVLSHLALFLRIARNFINESFSQIFIQNLYARA
                     LKEKDIYFLVLKYSLSPIVAYFGGSALSFMMGTYVVESVFAYEGLGTLLFKSIIFKDY
                     PVVLALIFFSVLLAAFFTFLSDIVARILNPRLRRLDFV"
     gene            complement(19907..21442)
                     /locus_tag="RTF91_000463"
     CDS             complement(19907..21442)
                     /locus_tag="RTF91_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDZ4943386.1"
                     /translation="MLRLFVLLFLLFFNVEAKIPKDTLIIAVENEISRINPAYSEDHD
                     AVINLVFSGLTRFDENMSLKPDLAKSWNVSKDGLIYDIFLRDDVLWHDGVKFSADDVK
                     FSLEAFKNTKNNSSVYVNFEDIKSIEILNPYHLKITLFKPYPAFLDALSIGILPKHLL
                     ENENLSTTSFNQNPIGTGPYKFVKWKKGEYIEFKANEHFYLSKIKTPRLIIKHIFDPS
                     IASVELKNGKIDAALIDVSLLNIFKNDASFEILREISADYRALMFNLNNEFLKDLKVR
                     QALNYAVDKESIVKNLLHDYAFVANHPLERSWVNPKNFKTYKYDPKKAQDLLMSAGFK
                     KNKDGNFEKNGKILEFEIWAMSNDPLRVSLAGILQSEFKKIGVVSKVVAKPAGSFDYS
                     QVDSFLIGWGSPLDPDFHTFRVFESSQDSALNDKGWNFGHYHDKKVDIALQKARNTSN
                     LGERKKYYKDFIDALYENPPFIFLVYLDFALVYNKDLKGIKSRTLGHHGVGFTWNIYE
                     WSK"
     gene            complement(21557..24328)
                     /locus_tag="RTF91_000464"
     CDS             complement(21557..24328)
                     /locus_tag="RTF91_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDZ4943387.1"
                     /translation="MADFKAFYNEAKYIFEDRIFNDYARCYAYGIDASCYFYIPKIVI
                     IAKNEDEIKHVIKLANTYKTPISFRAAGTSLSGQSSCDGVLVVIKFAFKKIKINKDAS
                     EITLGCGVVGIHANESLAFLKKKIGPDPATINSALIGGIVNNNSSGMCCGTKDNSYKT
                     LRSIRVILANGSMLDTSDALSVEQFKDENKKLIKELREIKEKINANQELKDLIIKKFK
                     IKNTTGYSLNAFVDYDDEIDILAHLFIGSEGTLGFVSEVRLAVLDDLEFKACALLFFN
                     SINDAANTIKEFAKVDFISSAEIMDYASLKAASTYDELRDILADIKEGNTCVLIQSEH
                     SDEFKLDENINKIKEISKLSYKSYFSKNKAEYDLWWKIRKALLPIAASLRKAGSTVIT
                     EDVCFNIENLADGIRSIQELFYKYGFSDNGIIFGHALAGNIHFIITPDLNNELEFDNF
                     SNLVKEMSNIVASYGGSIKAEHGTGRMVAPFVEVEWGKQAYEINKKIKSIFDKDNLFN
                     PDVIISNDKDIYKKNIKQASLIDEKLNTCMECGFCERFCPSNEYTITPRQRIAILREI
                     KRLESLNDNVSKVKLKDIKKYYNHLVDSSCAACGVCSFSCPLGINFADFSLKYRKNNT
                     GFMSKILGNLAYKNHEKTLKIAKFSLSIANKFDNLSLDNKLEKARNFISIIPRTRAYL
                     PKVNDYELKSYKKACNIVYFTSCLNKSFKPNEKMHDKRSLQEVFESLCKKANIGIIYA
                     SNDLCCGKAYENFQAIQEKNIQKINDFLSNIDSPIVLDHSACSAKLISNHAKYEIYDL
                     SEYLLKFIAPKLRIDKINEDVGLYIMCAARKLGLNESIVKLAKLCTNGKILIDNDTYC
                     CGFAGYKGFLNPKLNINATKGFKKFYAKTNIKRGFSTSSTCEIGLSDATGISWQHIAY
                     LLDECSEAI"
     gene            24490..24912
                     /gene="cgb"
                     /locus_tag="RTF91_000465"
     CDS             24490..24912
                     /gene="cgb"
                     /locus_tag="RTF91_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-domain globin Cgb"
                     /protein_id="HDZ4943388.1"
                     /translation="MTKEQIQIIKDCVPILQKNGEDLTNEFYKIMFNDYPEVKPMFNM
                     EKQISGEQPKALAMAILMAAKNIENLENMRSFVDKVAITHVNLGVKEEHYPIVGACLL
                     KAIKNLLNPDEATLKAWEVAYGKIAEFYIDIEKKLYDK"
     gene            complement(24932..26563)
                     /locus_tag="RTF91_000466"
     CDS             complement(24932..26563)
                     /locus_tag="RTF91_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter permease/ATP-binding
                     protein"
                     /protein_id="HDZ4943389.1"
                     /translation="MPFIIELLKQNKLKLISFLLFSFLTSTVGVLTLVFINDYLLKNA
                     QNIPIFYFIVLLLIFFISSTIVELGLSIFGQNFIFKMQRRVVKQILDTPLLRVAKVGK
                     ARILASLGSDVRNISFGLLRLPDFLQSSILVLCTSVYLCYLSPQIFALCVVWIMVIFI
                     TNNFLMMKVYQYFRKARENDDALQNNYQNILDGHKELLINRDRAKLYYEDEFENNARL
                     KKKNSTLGNLFNNLSNNWTNVTLLALVGVEFYLALKFEWASAADATTIALSILFLRTP
                     LVSIIGSFPTLLLAKIALDKITKLELDNYIEGFKKTCYIGEWKKISFKNTQFTYEENF
                     HLNPVNIELKKGELVFLIGKNGSGKSTFCMLLTGLFKPSKGGIYVDDMLVDDKNLDEY
                     RSLISAVFSDFHLFTKTLNKENFASEEKIAFWLEFLELKDKTSVKDNELTLTKLSTGQ
                     KKRLAMLIALLEERDILVLDEWAADQDPVFRRFFYKKLLPLLKEQGKTVFAITHDDAY
                     FDSADRIFLAQNGEISELKGENIKELAKNLVEKFD"
     gene            complement(26613..27902)
                     /locus_tag="RTF91_000467"
     CDS             complement(26613..27902)
                     /locus_tag="RTF91_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ4943390.1"
                     /translation="MKKSKFGTKEIKILGLSSLGGTLEFYDFIIFVFFAEYIANVFFP
                     KDMGEFWALLNTYGAFAAGYLVRPLGGIVMAHFGDKFGRKNMFMLSILLMVLPTFVLA
                     FIPGYETLGFLAPILLIFIRIFQGIAIGGELPGAWVFVREHCQEKQKAFFLSCLNSAM
                     ALGILLGSMVFLIINAFFSVEEIATYAWRIAFFVGGIFGIISIYLRRFLQETPIFKQM
                     QKESSLSSFPFKDLFKEKDIIKNLFSSMMMTWVLTGCVIVLVLLMPKFMPSILNLSGV
                     EGSYLQVLGILGIALGGAFVGYLVDKFGLFKICIFFSLTFVFSSFLYFYALYELKNLI
                     LVCILYSFICFLGGINVFAPILMSEVFRAKIRFSGISFSYNIAYAISGGVTPQLAFWL
                     NTLATKNENPFLYGMSMYMIFLALLAICAVFMVKDKI"
     gene            28182..28784
                     /locus_tag="RTF91_000468"
     CDS             28182..28784
                     /locus_tag="RTF91_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002892622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDZ4943391.1"
                     /translation="MKRNEHNVVLIKNPNFNALIDTGFLDTIDTLKEKLHFHKTDLKD
                     ITHIILTHAHPDHIGALMSEENLFPKAKILIDKKEYDFWIKSNRQEIKNTLLKLKNIN
                     FIDHSKDLIFTNSGIKALPAYGHTPGQNAIIINDKIVFWGDLLHLYDIQIPKPKIAIK
                     FDIDQNEAIQTREKLLKEFKERKLKVIGTHVPFSEPRFLD"
     gene            28864..29082
                     /gene="infA"
                     /locus_tag="RTF91_000469"
     CDS             28864..29082
                     /gene="infA"
                     /locus_tag="RTF91_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDZ4943392.1"
                     /translation="MAKDDVIEIDGTVLESLPNANFKVELDNKHVILCHIAGKMRMHY
                     IRIMPGDKVKVELTPYSLDKGRITFRYK"
     gene            29255..29368
                     /gene="rpmJ"
                     /locus_tag="RTF91_000470"
     CDS             29255..29368
                     /gene="rpmJ"
                     /locus_tag="RTF91_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDZ4943393.1"
                     /translation="MKVRPSVKKMCDKCKIVRRKGVVRIICENPKHKQRQG"
     gene            29371..29736
                     /gene="rpsM"
                     /locus_tag="RTF91_000471"
     CDS             29371..29736
                     /gene="rpsM"
                     /locus_tag="RTF91_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDZ4943394.1"
                     /translation="MARIAGVDLPKKKRIEYGLTYIYGIGLFASRKILDKVGISYNKR
                     VHELSEDEAAAIRKEIQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQK
                     TKTNARTRKGKRKTVGAKS"
     gene            29746..30138
                     /gene="rpsK"
                     /locus_tag="RTF91_000472"
     CDS             29746..30138
                     /gene="rpsK"
                     /locus_tag="RTF91_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDZ4943395.1"
                     /translation="MAKRKIVKKKVVKKNIAKGIVYISATFNNTMVTVTDEMGNTIAW
                     SSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSVGA
                     IEGIKVTFLKDITPLAHNGCRPPKRRRV"
     gene            30166..30792
                     /gene="rpsD"
                     /locus_tag="RTF91_000473"
     CDS             30166..30792
                     /gene="rpsD"
                     /locus_tag="RTF91_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDZ4943396.1"
                     /translation="MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHG
                     ARKGKISEYGLQLREKQKAKFMYGVSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDN
                     VVYRMGFATTRRFARQLVTHGHVLVDGKRVDIPSFRVKAGAKIEIIEKSKNNPQITRA
                     IELTAQTGIVAWVDVEKDKRFGIFTRKPEREEVVIPVEERFIVELYSK"
     gene            30805..31818
                     /locus_tag="RTF91_000474"
     CDS             30805..31818
                     /locus_tag="RTF91_000474"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDZ4943397.1"
                     /translation="MRNITTSAYTPTEFTIENISDTVAKISAWPFEIGYGITLAHPLR
                     RLLYTSTIGYAPTAIHIDGVAHEFDSMRGMLEDVALFIINLKKLRFKIKGDSNKEIVE
                     FNFKGSKEIYGKDLNNDQVEVVNKDAYLATINEDTELKFTLIIEKGIGYVPSEEIKEL
                     LNDPKFIALDAFFTPVREATYDIEKVLFEDNPDYEKVVLTVTTDGQITPNEAFQNALE
                     AMYKQLSVFDKITNVRSAIKNQATSNELENTKLLQNITDLNLSARSYNCLEKAGVVYI
                     GELALMSVSELAGLKNLGKKSLDEIKNIMESIGFPVGTSKLSDNKEILKNKIVELKAQ
                     NEG"
     gene            31822..32175
                     /gene="rplQ"
                     /locus_tag="RTF91_000475"
     CDS             31822..32175
                     /gene="rplQ"
                     /locus_tag="RTF91_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDZ4943398.1"
                     /translation="MRHKHGYRKLGRTSSHRAALLKNLTIALVNSGKIETTLPKAKEL
                     RGYIERLITRARLGDFNAHRAVFASLQDKNATNKLVTEIAPKFKDRNGGYTRIIKTRI
                     RRGDAAEMAFIEFVA"
BASE COUNT        12263 a         5620 c         4011 g        10304 t
ORIGIN      
        1 actaaaagag gtttagaaca agacaatcaa gcggttaaag aatcagttga aactgtatca
       61 gttgtagaaa gtggtaatct aacagcaaga atcactgcta atcctagaaa tcctcaatta
      121 attgaactta aaaatgtttt aaataaactt cttgatgttt tacaagctaa agtaggttct
      181 gatatgaatg ctattcataa aatttttgaa gaatataaaa gcttagattt tagaaataaa
      241 attgctaatg cttctggaaa tgtagaatta actaccaatg ctttaggtga tgaaatagtt
      301 aaaatgctaa aacaaagttc agactttgca aatgctttag gtgatgaaag tggaaaatta
      361 caaacagctg ttcaaagctt aaccacttct tcaaattctc aagcccaatc tttagaagaa
      421 actgctgcag ctttagaaga gattacttct tctatgcaaa atgtttctgt taaaaccagt
      481 gatgttatca cccaatctga agagattaaa aatgttacag gtatcatagg cgatattgca
      541 gatcaaatca atcttctagc tttaaatgct gctattgaag ctgcacgtgc aggagaacat
      601 ggacgtggat ttgcagttgt ggctgatgaa gttagaaagt tagctgaaag aactcaaaag
      661 tctttatctg aaattgaagc caatactaac ttacttgttc aatctatcaa tgatatggca
      721 gaaagtatta aagaacaaac tgcaggtatc actcaaatca atgaaagcgt agctcaaatt
      781 gatcaaacta ctaaagataa tgttgaaatt gctaatgaat cagctattat ttctagtaca
      841 gtaagtgata tagctaataa tatcttagaa gatgttaaga agaagaggtt ttaaagctta
      901 gataactagc ttaaaaaagc tagttatctc ttaaattatt ttattgattt aaaatttgat
      961 ttttactctt gcataaattc tgccaatttg aagtagtttt gatttcaaga cattgtttta
     1021 agctttcttt ttgagcttgt gtattttgca ttctttcata agttaaagct tgcgtatata
     1081 aagcccttgc tctatcttca tctgaaagtt ttaacttaag caaatctgtt aaaacagcca
     1141 aactttcttc atttttatta attttagcca aagtatcaag atacataaat tctaaactag
     1201 gactaaaaag atttatacct ttaaaatttt gataatcaat agccttaggt gcgtaagtta
     1261 aaatcgttgc ttgcatatta tgatcattag cataagaaag taaagcatca taggcttcta
     1321 ccatactaaa attcattgga aaactttcca aaatttgcaa aattttaata gcttgattat
     1381 agtcatttaa atgcaataaa gataaaaatt gcaaataata agccttaaaa ttttcatcat
     1441 cactttttaa aattctagaa tgagctatat ctttagaaat tttaatcacc tgagaatatt
     1501 gtttattacc aaaaagaata gatgcttttt gaagaccata aaatatagaa tcttcattat
     1561 aatttttatc tatataatca agtgcttgtt caacattaga agttctgata agacaagcta
     1621 acatttgttt cttattgtca attttttgac ctatatcata agcactaaaa cgcataaaaa
     1681 tatttgcagc atttatacaa ttatcagctt ttattgcatt ttttaaatca ttaatagctg
     1741 ctttctctaa aaattgagta gcatttggaa tttttttact ttctatcaga tctttataag
     1801 ctaaaatagc actgaaattt ccctctttat aataaagtgc aacatcttca tctaaagctt
     1861 tatttacaat attctcatct ttatttgcat attgtttcat taaatctgtg taacgctgat
     1921 gcaaaaagct tgcattatta tcacctaaag caaagaacac ctcatcgctt gcttttttaa
     1981 tttcatccaa atacttgcca tctagataat catccatata caaatcaaga tattttttag
     2041 catcaccaaa tctgttagta tgtgataaaa ccaaggctaa atcttttaaa gtttcttcat
     2101 aatttggttc aagtttagac attttagcaa aagtatcttc ataaatactt gcacttatat
     2161 caaattgtcc tttttgatca aataatttag caagttccaa agatcttgga atatcttttc
     2221 caaaatattc aggattggct tttaaaatgg tgttaatata ctctatagct ttatctgttt
     2281 gctcatttaa aagcaaattc tttgccaaac tcatagctgc ccttgcggct aaatctaaat
     2341 tttttgtatt aaaataagta ttttcataga tatttacagc tttttctttt tcgtttaaat
     2401 tataaatata atctgcataa tcaagttttg ataattgggt gaaataatta ttgggctgtt
     2461 cattatctaa aatcgacatt atatattcaa catctgcacg ttgagccaag gcaatataag
     2521 tttttaacat tatatgtaaa acttctgaaa aatttctatc acttgtaaaa gtacgcatcc
     2581 aatttttagc atcatcaatc atcttttcta aaatttgctg atcccgcata cttggatctt
     2641 gagtataaag tttattttga gctcttaatt tatataacat aaattcacta gtgaaaatac
     2701 tactacgata tctattgata gcattttgtg catcagttac tacttgatta taattagctt
     2761 tgtcatactc ttttttaata cgcaaatatg tattaatatc cgcactttgt ggaataataa
     2821 caggattaga atttaaatct aaagccccaa cataaggcaa gctttcgtgt ggaaaattga
     2881 tattaaaatt aagtccatca taatccctaa taggcactag ttctggtgcg aaaacaaaag
     2941 taaaagcttt actcttatgt gaatttgaca aactaagttc tttatctata tagatatttt
     3001 gagctgtatc aaacattctt gcttgcatct ttggtaaaat aatcatttta attttttgag
     3061 cttcttgtat aaattttaaa tcaaaagcag aaaaactctg atcttttaat tgattatcga
     3121 ccatacctac gatatcacat tcaaaatgaa cttttgcttc ggtaataaat ttttgacaag
     3181 taaattctaa atcgttactt gcatgcaaaa cggcaaaagc ttgattgttt tcacgacccg
     3241 tatttaaaac aagctcaaaa gcaaaaatat gtaaaaaact taataaaatt aaaaataata
     3301 ttctcataaa gcaattatag caaaactctt acaacattaa caatatagca aaagtatttg
     3361 cataaacaca aaaagctaaa ataaaatttt gtataaaact aaatttaata ttatgaatcc
     3421 tattgttttt tataaataaa gcatggatta aaatttttaa ataggcataa agcataataa
     3481 cagaagacaa agccacaaaa agtgccaaat accaatatcc atttaaaatt gctgtattta
     3541 aaatcataaa tttaccccaa aatacaccaa aaggcgggat acctgccaaa gaaagcacac
     3601 taatactcaa acaaaaagca gttaaaggtt ttttaactaa aagtccattt aaactctcat
     3661 aagaattatt ctcataattg cttaaaatca taaatacagc atagtttgca aaagcaaata
     3721 aagtccaata tccaaaaatc gcaagtaaaa ttccatcaaa attttgctct tttaataaag
     3781 gaatacaagc taccaaaact aaagaagaat gcaccacaga gctataagca aacatttttt
     3841 tgatattgtt ttgacttaaa gctgcaaaag cgcctataaa catagaaaaa attgttaaaa
     3901 ctattatgat atattcaaaa cctgtattat ttaaaaaatc aaaaagacga ataatcacga
     3961 ccaacattgc aacttttggc acaactgaaa taaaagcaac taaatttgta tgggctgcat
     4021 aatacacatc tttaagccag aaatgaaaag gtgctaaaga aagcttgatc gcacaaagaa
     4081 caaaaatcat cactccagca cccaaaagca tagggtcttt ttgaaattca tttttcaatg
     4141 ctaaattagc agataaatcc aaagttcctg tttttaaata aataaaagct atagccataa
     4201 caaaaaatcc agctcctaca gccgccacac taaaatattt tatcgcactt gaaatagcat
     4261 tatcacttcc acgcattgct attaaggtat aaagcgctaa agaagaactt tcaagtccta
     4321 taaaaataag cactaaattt gaacttgaaa ccatcaaaag caaggaagcg atcataaata
     4381 aaaacaaagc ataaaattca ccttgatttt cttctttttg cattaaaaga tataaaaaag
     4441 aaaaacataa aattaccaaa gaagcacaaa aagaaataat atcattattt aaagtagcta
     4501 aaaaagcttt tgcttctaag ccttgggcat ttgcgttgtt taaaattaaa aaaacactta
     4561 caattaaaga taaagaactt ataccaatat aaaacgatcg gtgaaatttc caaaaaccag
     4621 aacaaagcaa aagaacgatt gcagatacaa ttaaaaataa aaatggataa gataagctta
     4681 tatttaaaag ttctaaattt aaaaaattat ttaacatttg cttctcctat tttggataaa
     4741 aaatctaaag tattttgctc aacagctcta atattcattg tttttataag attatccaca
     4801 tctttttgta taggctttaa aagcgtattt ggcataagtc ctaacccaaa aatgattatc
     4861 accacacaca caagtgctac tacttctcta agacgtaaag aaaacgcttc tataacgctt
     4921 tctccttgca tgaaaaatat ttttctaaac actgcaaaca tataaatcgc ccctaaaata
     4981 atcaccaaac ctgctaaaaa agcatagaat aaattaattt ttgctatacc tagaagaatt
     5041 aaaaactctc ctacaaaaga aatagttaaa ggcaaagaaa cactagcaag caaaattaac
     5101 ataaagaaaa ttgaaaataa aggtgctttt ttagccaagg agtgataaaa agcgatatca
     5161 tgagtatgat atctttgata taaaacctca atcattaaaa ataaaacccc tgtaacaaca
     5221 ccatgtgcaa acatataaaa aaccgcacca ctaatgccca aagcatttaa agaaaaaatt
     5281 cctaaaatca tcacaccaag atgcgaaata gaactataag caatcaattc cttgatattt
     5341 tctgttttat aagcaattaa ggcattataa acaatactaa ctatacacaa agctataatt
     5401 aaaggcataa aatacacact cgcatcagga aaaaggggta agcaaaaaag caaaaatcca
     5461 aaaggagcca ttttaaaaac cacaagcatc acagaaacaa gcacaggtga atttgcataa
     5521 accttaggtg cccaagtatg aagtggaaat aacggagctt tgatagcaaa agcgataaag
     5581 aaagctccaa aaagtaaaag ttgttctgtg aaatttactg ccgaggcatt atttttccaa
     5641 atttctaagt caaaagtgaa aatatttaaa agctgataat ttaaataagc ttgataaatt
     5701 aaggctacaa gcattaaaat tgaacctgca aaagcataga taaaaaactt tacccctgct
     5761 ctaaaatcct taccataaac ccccatgata taaagcaaag gcaaaagaga aaattcccaa
     5821 aaaacataaa ataacaaacc atcttttgca ctaaaaagcc ccataatagc aaattctaga
     5881 aagaaaatac aagaagcaag ggctttttgt tccaccttta aaaataaaaa acttaaaaat
     5941 atcatcaaag agcttaaaag cattaataca agtgcaatgc tatccactcc tatatgaaag
     6001 ctaaaaaatt ttaaaatttt aaaagaaata ttataatcaa agcttgttcc ttgcaaaaaa
     6061 tctgcaaaaa tatccaaatt taaagctaaa atcataaaac ttacaacaag gctaaaaacc
     6121 ttaacgcctc cacgatttaa aagcaaaacc acaaaagcag caatcaaagg aaaaaatatc
     6181 aaataattta gcattttaca ccacccatac caaaatcagt aaaatcacaa aagctgctac
     6241 caaaaatcta agcattaaat ttaagctatt tggcataatc attttttttg aaatgctttg
     6301 agaataaaaa gcgatttttt caactactct atcaaaaata taaagatcac aatgtcttaa
     6361 aatcacacat aaactttcat attttgaaac tataaattga tgataaaatt tagggataaa
     6421 ataatcacta cttaaaagtt tatgaatttt attttcttca atactctctt taaaccaaga
     6481 atttttataa gcaaaaatag ccaaaatcac acccaaaata gccgccacac tcgcacaaat
     6541 cataacaatt tgattttgtg catcaataaa gactaatttc gtgcttaaat attcaaaaaa
     6601 gctatattca aaaaatcccg caatgatagc taaaatcatc aaaggactca tagctaaaag
     6661 tgcgatttta cttgcttcat gcggatgttc attatgtctt gaaggagtaa aaaacactaa
     6721 cattaaaagt ctaaagctat aaaatgctgt taaaaaagct gcaatcaaaa gcactaaaaa
     6781 aataccatga tgaaaagaaa taaaagaata tcctaaaatc aaatctttag agaaaaaccc
     6841 tgcaaaagga taaattcctg ctaaagctag agttcctata cacataaaaa tagctgtaaa
     6901 ttttaaaggt ttaaaaagcc ctcccatttt tttaatgtct aatttatcat tcatagcatg
     6961 cattacattt ccagcaccca agaaaagtaa agatttgaaa aaagcatgag tagctaaatg
     7021 aaataaagct atactataag ctccaagtcc tgcagctaca aacatatatc caagttgtga
     7081 taaagtagaa taagcaataa tacgttttaa atctctagcc accaaagcca tagaagctgc
     7141 aaaaatcgct acaaaagctc caagtaaagc aataatataa gaaatttcag gaactaaatc
     7201 ataaatcgta ctcgcacgaa taactaaata aactcctgct gttaccatgg ttgctgcatg
     7261 aattaatgca gaaacaggag ttggccctgc catagcatca gcaagccaag tgtgaaaagg
     7321 aaattgtgca gattttccca tagctcctat aaacaaacaa gctgcaatta aaattagaac
     7381 attgtgatct aagctttgta ccatggaaaa aacctcatcg tattttaatg ttccagcttg
     7441 caaataaagc caaaaaattc ccaaaagcat acctaaatct gcgatacgat tcataataaa
     7501 agcttcatta gctgcaaaag aataaatatt gtttttatac caaaaaccta taagcaacca
     7561 agagcaaagt cccacgcctt cccaacctac aaaaagtcct aaaaagttat cactcataac
     7621 taaaaaaagc atagaaaaga caaaaagtcc taaataagca aaaaatttat taaaaccctc
     7681 atcatgagcc atataaaaaa tactataaaa atgcacacaa gttgctacaa tacccacaac
     7741 actcatcata gtaagtgaaa tagcatctat atcaaaacca aaattaaccc cggcaaacca
     7801 ttcaaataaa ctcacattaa aagctttatt gcaaaaaaat aaatataaag aacaaaaagc
     7861 acttaaagcg actaaaagcg agcaaattat ccctacgaat tgttttttct cgctcaaagc
     7921 aaaacaactt gcaaataaaa aagctataaa aggactaaaa agtgaaatca aagctaaatt
     7981 ctgcatacta agcctccact tcttttaaac tttgtagctc taaagtgcct tttcttctat
     8041 accaaagtac acacaaggct atacctacag ccacttcaca agctgccaca cccataataa
     8101 aaagtgcaaa aacttgtcca tttaagtcat tatgcatttt agaagctgct actaaagcca
     8161 aattggcact gtttaataaa atttcactgg aaataaaaag cataatgaga ttttgtcttt
     8221 ttaaaacccc tacaagccct attacaaaca ttaaaatagc tacgaaaaaa tacttttcta
     8281 tcattgtttt tcctttgtaa gctctttatg agtaagagtg atggcacaaa ctaaagcaat
     8341 taaaagcaaa atagctataa attcaaaagc taaaagatat tttgaaaaaa ttgctaaagc
     8401 aagttgttta ttaaaatcaa acaaagcaag atcatttaaa gccaaatctg tgctaacact
     8461 ttggtattta aagcctataa acatagccaa aagcaaaact gcacttaaaa ttactaaacc
     8521 aaaaaaactt ttcttagctt tgagctgttc tttaaattct ttagaagcat caaaaaacat
     8581 catcgcaaaa ctataaagcc caagcacagc tccgctataa acgatgattt gtatcacacc
     8641 taaaaactct gcatcaagta aaaaataaaa tcctgataaa aacaccattc cacccgctaa
     8701 agctgaaaga gaataaagca tatttttact taaaaccgca ataccaaaaa aacctaaaac
     8761 cactacgcta aaaaacacaa aagctaaatt ttctatcatt tgttttctcc ttgctcttgt
     8821 atattttgac tttctaaagc cctttcttgc atcatatcat aataatttgg cgttttttta
     8881 acccacaaat tggcatcctt tctaagactc cccgcccctt caaattcaac ttgattttta
     8941 agcttgtcaa taggagttaa aaaatcttgt ttataaccaa aataagatct ttgttcagct
     9001 gcattttcat actctgttcc atgcactata gcaagttcag gacaaacttc agcacaaaaa
     9061 ccacaataaa tacaacgccc caaattaata ctataattgc tcaccttttt acgcccattt
     9121 tcgtctaaag aagtttccat cctaatacaa ttactgatgc aaattttttc acaaagccca
     9181 caacctatac atctttcatt ttcactttct ataaaacgca tcaaacgatg aacagcacgg
     9241 taacgattat caagttttac tttttcaaag ggatatttaa tcgtggcact attgtttctt
     9301 ttaagtaatt ctctcatcat cacaaaaagc cctacaaaaa gctctagttt aacacttcta
     9361 cgcaaagctt gtaaaatttt ctcccaagtg ctaataggag tttttctttt ctcatctact
     9421 aaataataat ttttcatatc aaactcctat aaaagaactg ctaaagcagt aattaaaagg
     9481 tttaaaaccg ctaaagggat taaaatcaaa tagcacattt tcatcacttg atcaggacgc
     9541 aattgtggaa aagctgctct tgcccaaaaa taccaaaaga aaataaaact tgattttact
     9601 atcatcataa tccaaccagg aatgatccaa aagctattaa aaccccctaa aaacaaaaga
     9661 gttactaaaa tagctccagc tatcatagaa gcatattcac ctataaaaaa cataccccat
     9721 cttaaacctg aatactctgt tccataacct gctacaattt cagcgtcatt ttctgttaag
     9781 caaagcggag ttctattagt ctctataaat aaagcaatca caaaaagcac aaaagctaaa
     9841 ggttgcttaa aaataagcca agaaaaaaat ccatcacttt gataattgtt aatatccacc
     9901 aaagaaaaag aacccacaag catcacaatg gcaattaaag ccaaagctcc cacgctttca
     9961 taagaaataa tagccacaag tcctcttgca gcacctaaaa tcgaccattt attattgctt
    10021 gcaagtccac ctaaaaacac cgcataaaaa caaagtcctg aagtaccgat cacaaaaagt
    10081 aaagccacgt taatatctgc tactatgggc tgaatcacca ttccaaacaa agtaaattca
    10141 ggcaacatag gaatagctgc taaagaaaca aaagcacaaa tagcagaaat caaaggcgct
    10201 atggcaaaaa taaatttttg cgaatttgaa gggatgatat cttctttagt aaaaagtttt
    10261 atcatatctg ctactaactg aatcaaacca aaaggtccta ccatatcagg ccctatgcgt
    10321 ctttgaaaat acgccaaaac ctttctttca gcataagttg caagacctgc taaactcgca
    10381 aatactgcaa tgacaataat acatttaatc aaagtttcca aagcaaaaaa agcaaaatca
    10441 ctcatggttt gctcctattt tttctaaatt cgctacgaca aatctttcat caaaaaagct
    10501 tagcgtatca agtttttcat caaaatacgg caagaaagct ccatttttta tgtctttatc
    10561 tacacgcaca ctaaggctta attctttatc ttttatttta agttttacaa ggtctttgtc
    10621 tgataaattt ttctctttgg ccaaattttc acttacacct aaaaaaatcg cttcattaat
    10681 cgcactagca cggtttgaaa atctaccaaa ttgataacta ggattagcac tgtagagtaa
    10741 aatttcatct tcttttaaac ttaaattttc aaagcttggg gaaataaatt cttttttagc
    10801 ttcttgttta aaacattcta aattaagttc atatcctctt ttacactcac ctccatttgt
    10861 ataaaaattt tctaaatgat caaaatcaat tggagaaaaa cctttattta taggcaatct
    10921 tttagtatag tttatagtat attcctcatc aaaacctaaa gcattagcta aatcatttaa
    10981 aaaatatcca ttaaattcca aagcggcatt ggttggcacc actcttttat cgtaatttaa
    11041 aaaagtacct tcttgctgat ttaaactcgc actagctaaa tttgcatgct cttcataaga
    11101 aaaactaaaa tcaccctttt cattataagc taaaatctta ccttcttgta tactctcatc
    11161 taaatcgcaa atcattgcta ctcctaaagt atttgtatgc ataggattta aaaagacttt
    11221 aaaaggtgtt gtactttgaa tcaaagcaag taatttagct aattttttcg cttttttatg
    11281 aaaataaaaa tcacttccta caacaaggat aaaatttgct tttttaagta ataaatcttc
    11341 taacttatcc tcatctatac ctaaattttt agcaaaaaca gagcgtttta cttctatggt
    11401 ttttttcact tttttagaca caactttttt tacttctttt tgaatttcat tgccttcttc
    11461 atctttttct ataacttgtt ctacaacttc ttcattgata ctttcttcta tttctttatt
    11521 ttcactgata aaaaactccg ctaaatttgc tttaatggct tcatcttgac tgaatttttg
    11581 aagtaaaaaa tataaaattt gctcttcatc gccactttta tgagtatgtg aaataaaatt
    11641 tttagaatat tttacgatgc ctacatcttc aataggatga aaataaagtc ctgaaccttt
    11701 attcatcact aaagcattat tgattttata actaagcgtt ggagcatcgt atcgtaaaag
    11761 tgttccagca acaactaaaa aatcactttt tagtatatct tgagtgttag cattgtaaaa
    11821 ctctcctgaa ttagcgataa attcttgtaa aaattcttta aatttcaaag cttcttcatt
    11881 gatcaaagaa agattaaatt tcttttttaa attttgcaaa atcaaagctt cttcattggt
    11941 gataaagcta ttaaatttaa tatttttgat tgcatttttt tcaaaaagct ctacaagttc
    12001 tttaaaagct ttctcatctt tatttgcctc attttgcgta tcaaaagcaa atcttgcagc
    12061 cttatttaaa cttgcaaaag caaaatcatt gctcacacga taaatttttt ctttttgatt
    12121 gctaatgcca ctttgtttaa tgtcataata cataagctca caatcacttg aatgtggatt
    12181 tgaagcagga attcttttaa gctcccaaat atttgaagtg tattgaaatt tagaacctat
    12241 caaagctcct gttggacaca cgcttgtaca ttctccacaa aatgaacaat caagcgtatc
    12301 gccatttgca ggtcctatca agcttttttg aaatttagtc caaattgcat aagcatcttt
    12361 tcccatactt tctttaaagc tattatccac gctatctccg ccacgaggga cggtttttaa
    12421 agcactttca cctatcttat ccttacatac agtaatacaa cgctcacaca ctatacaaag
    12481 agcaggatca taattaatca ttccccaatg tttatggggt ttatgcgtat ctttaatcca
    12541 atgtttttga acgtttacac gacttttatg ggtgaaattt tgtaattcac attcgcctga
    12601 cttatcgcaa actccgcatt ctaaaggatg attgatacaa taagcttgca tgatttcatt
    12661 tctttcatcc caaagatttc tcaaatcact ttctacaacc ataccttctt ttgctttagt
    12721 attgcaagaa tacacctttt taccatcagc ttcaaccata cacatacgac aagccaaagt
    12781 aggactacag cctgaaagat aacaaatcgc tgggataaaa atatcatttc ttcttgctat
    12841 atttaaaata tattcgcctt cttcaaaggc gcaatctata ccattaatct taactgtcat
    12901 tttgcttcct ttatgcgaat tggagtaaaa tcaaaaccat tattttcatg atttaaaaaa
    12961 gctatagtgc cttgtaaatt ttcatccaaa caaagcttgg ttttaaaact aaaatcttta
    13021 gctaaaattt ccacttcact ttgatctttg cattttgaaa tttgtaaaaa ttgttttgag
    13081 caatgtaaat ttttatcttt taaatttgct ctaaaaagca ctaaaccatc ataattatct
    13141 agctctttta aactacttaa agtcgctttt ttaaaatcac attctgtttc attgctgtct
    13201 aaaattttta gtccgtattt tgcacttaaa aaatataaaa aatacttgat attttcgcta
    13261 tctttgtaag aagggatatt tttgtctatg attaaatatt tagcctcttt taaaaaacca
    13321 agtacttcat ttgcttcttc ttcgccaaaa caagattcag cactcaaata tccttcgtct
    13381 aagttataaa actggccttc atcacttagc ttacaaagca aagccaaaac gaaactcaaa
    13441 cttgcaattt cacatttata aaatttagct tttaaatttt tatcttccaa acaagaaata
    13501 ttaatactat ttgcaccgat tttttcacat aaatttttgt ttttaaggct tggcatgtct
    13561 aaaaaacaaa gagcattatc ataaatcata ccctctcctt ttttataacg atagtccaat
    13621 ctacttgatt gaattttaaa gaatttaaaa gctcacagcc ttgttctttt acaaaagaaa
    13681 aacttttttc aacaggagaa aaatcgccga tttcaaaaag taccaccaaa acttcacctt
    13741 gttttgcttc ttttataatt tgtgtcaaat cttcaaaaag ctctttgctc tttcttaaat
    13801 ctactcttct catcgatcta tctcacctaa aactatattt acattaccca taatggctac
    13861 aacatcagcc aaataagtac ctacaagcat ttcttcaaaa aacgcacaat gccaatagct
    13921 aggagttcta gcctttaaac gataaggtct tcccgtacca tcactatgga taaaaaaacc
    13981 aagctcgccc tttggacttt cagttggtac ataaacttcg cctttaggag gttttaaacc
    14041 ttgagtgatt aaaacaaaat gttgcattaa agaataattt tgcgttaaaa tttgctcctt
    14101 tgaagcactc acatactcag gatgtgtggc taaaatttca ggcggggtat ctttataaag
    14161 tgcggcacat tgtctaagga ttttcaaact ttcacgaaat tcttgcatat aaactttata
    14221 tcttgcataa gaatctcctt gtgtagcata aggcacacca aattccactt cattataaag
    14281 caaataaggc tcttctttac gtatatcata ttttacacca cttcctctta acatcacacc
    14341 tgtacaaccc caatttaagg cttgctcttt agtaaccaca cctatatttt cagttcttaa
    14401 acgccaaatt ctattatcat ctaaaagatc ttcatagtct tttaaatcat ttggaaattt
    14461 atcgcaaaat gcgagcattt cttctaaata attctcaggc aaatcaagca taactccgcc
    14521 tattctcata gaagaatgtg taagtcttgc cccacaatat ttttctatca aatccaaaac
    14581 atactcgcgt tccctaaagc aatataaaaa tacactcatt gcaccaatat caagcgcatg
    14641 cgtagcaagc caaagcaaat gcgatgcgat acggtttaat tccaaaagta tcatgcgtat
    14701 aaccgctgca cgacgcggaa tttctaaacc gcaaagcttt tcaactgccg cacaataagc
    14761 ataattattt gccgaagcag cgatatagtc cattctatca gtagtaggaa taaactcttg
    14821 ataaatcata ttttcagcca ttttttccat accacgatgc atataaccta tacaaggacg
    14881 tgcttttaca acttgttctc catcaagctc caaaacaagg cgtaaatttc catgtgctga
    14941 agggtgttga ggccctaaat ttataatcat ttttgagttt tcttgctcaa aagctatatt
    15001 ttcataataa ggttttaact tgctaggaat ttgcatttta acgccttttc tctaaaattt
    15061 tcgcttcatc gcgttttgct ttttttacaa aaaccacgcc ttcatcttct tggtattctt
    15121 gtttaaaaga aatttctttc ttttggccac cttttggcac ttcatgataa agtcttgcaa
    15181 aatttagcgt atctttatca tcagcaaaac cagaatctct ttgttcttct cccactactt
    15241 cgcggtattc tttaccaaaa attttatcaa tctcatacca tcttgcaaat tcatcgccct
    15301 ttaaaggata agtttttaaa aacgggtgtc caaaccaatc atcgggcatt aaaatgcgtt
    15361 ttaaattagg gtgacccact ataaaaattc caaacatatc ataaatttct ctctcactcc
    15421 aatttgcccc tttaaaaata tgagctacac tttgcaaacg ctcttttaca cctataaaag
    15481 tttttattct cactcttaat tttttttcta aatttaaaag ctgataaaac acttcaaaac
    15541 catttttatt tgctataaaa tcaatagcac ttgcttctgt aaaacttaaa tatcctaaag
    15601 ttttaagcat ttgtaaggtt ttgacattgt cttctttttt gatttctatc acccaaaaat
    15661 caagctccac ataagaattt aaaatttcta cttcagtttt taaaacttca aaatcatctt
    15721 taaaaatact ttcattaaca ttggatttta tagtatgtgg cgcatgataa aacctatctt
    15781 tgtaataatt ttgaatttgg acatttttct tatcactata ctttctcatt ataccaacct
    15841 tttaggtgcc attttacgac ttgctttttc tttacgaatc tttttctgca aaatcatcaa
    15901 agcaaactga aaactttcgg ggcgtggggc acaacctggc acataaatat ctacaggtat
    15961 gattctatcc actccttgaa cggtggagta agtattaaac ataccgcctg tattggcaca
    16021 acttcccatg gaaattaccc atttaggatc aggcatttga tcataaagtc ttcttgtaaa
    16081 ttcagcgtgt tttttgcata aagtccctgc aataatcatc acttcactat ggcgtggcga
    16141 agctctaaaa atcgttccaa atctatcaaa atcatatctt gaacccccag ctgccatcat
    16201 ctcaatcgca caacaggcaa gtccataaga taaagcccac aaagaattac tcctgcccca
    16261 ttgaacaagt ttatctacac ttgttaaaac tacaggtaaa ccacttgcat aatttacttg
    16321 atgctctgcc atgcaaacgc tcctttttta taagcataca aaaatccaac tcctaaaagc
    16381 acgataaaaa caaaaacttc taaaaatcca aaccaaccta aatctttaaa aatcaaagcc
    16441 caaggaaata aaaacacaac ttctatatcc aaaagtataa agattaaggc aatgatgaaa
    16501 aattgagagt taatcttgtt agcttgtttt atagggatgg gaccgcattc ataaattcca
    16561 agtcctaatt ttttgcgatt ctttgcagca aaattattac caatttttga agctaaaaaa
    16621 accagtccaa aaaaaataac actagcaagc actagcatta aaaaaacacc aaaataagga
    16681 tgcgaagcat ctatatgaga catttattct ccttttttaa aacactttaa tcactccaca
    16741 acaaaaatta aatttacact ttcctttatt ttactctaaa ctttctatat tgaaacttat
    16801 attaaaaaat attttttaaa gttttagttt tttatgatta aatttataaa aaagattgct
    16861 ttggtgagtt ataaatatat aagaaatatt attttttttc tgataattat ataaaaaagt
    16921 cacaatttct ttagaagttt taatatcaag agcagaagta atttcatcta aaattaacaa
    16981 tctaggattt aaaaccaaag cacggataag tcctacacgc gtcgcttctc ccccgcttaa
    17041 ctcgtaaggt ttttgttcta aaatctgttt ttttagatta aaaaaatcaa aaaattctaa
    17101 aatcaagtca tcattctttt gtaaattaaa attttccaaa ccatcttgta tgagattttt
    17161 gattttttta taaggattta aagctatttt ttgatcttga aaacaatact gaatttgctt
    17221 tcttaaaagc ctttgtttgt ttttatcaag cttgtgcaag ttaagatttt cataccagac
    17281 ttcgcccttg cttggatttt ctaaaaaaca aagaattcta gctaatgtgc ttttacctgc
    17341 accacttttg cctaaaatta ttaaattttt attttctttc aaataaaaat taacattatc
    17401 aaaaatgata tgtttttctt tttttaaata ccaatgcttt ttaagctcat aagacttact
    17461 taaattacaa actttaagca tgaaaatacc ttaaaaactc atctaagtca tacaaatttg
    17521 aatcactttt ttctagcata agaatttcat ctgccaaaga atttaccaaa tttaaatcat
    17581 gagtgatgca aactaaggct gtggtatttt tcaattcttc taaaatcgat atgattttag
    17641 aaacgttttc tttatctaaa gaagctgtaa tttcatcgca aattaaaatt tgaggtttat
    17701 tcaataaagc taaagccaaa ctcacccttc ttgccatacc caaacttaat tcattaacat
    17761 aagaatgcca caaccgatca agatcttcaa atcctaattt ataaagataa gaaaaagcat
    17821 aatcttttct ttctttttgt tttaattttg tatgagtttt taaaacaaga tggcataaat
    17881 ttccaatatc caaataagga taaagactaa gctctgcatc ttgtaaaaca agtgctactt
    17941 tagaacgaaa ttctctaagt tgttctttat taaaattaaa aatacaaaaa tcatgaaagc
    18001 ttaactcatc aaagcttatt gtgaaattag aatctaaaag ccttactaaa gcttttccaa
    18061 gcaaactttt tcctactcca ctttctccta gtatcatcaa agtcttgcct gtttttatat
    18121 ccaaattaat attcttaagc aatacattat ttttaaggct tatatttaaa tttctaatct
    18181 tcaagacctt acaccccaaa ttttttgtaa aaaattaccc aaccacaaaa gaggcaaaaa
    18241 caacaaaagc aagcttaaaa gtggaaaaag tatcatccac caagcaccta taaaaactgc
    18301 ctttgaagac tcacttaaaa gagtacctaa agttggaatt tcaaatccta agcccaatcc
    18361 aaaaaaactt aaagttgctt ctgtggctat agcatgaacg atattgaata taaaaagtgt
    18421 aaaaatcaat gtttttaaaa taggcattaa atctttaaaa aaagctctaa atttagttct
    18481 tccaagtact atatttgctt tataaaagtc taaattttca agtcttttta attcactttc
    18541 tataattctt gctataaaac accaatgaat tagagcgatt aaaaaaatca ttaaaaacac
    18601 attagaagtt atcatacttt gaaaaaacat cataagcaaa aaagcaggca aagctaaaaa
    18661 aaactccaaa acacgcatcc aaaaaacata aaaaaaacat cgtgcaaaaa gcaaaaagca
    18721 aaaagcaaaa ataatagaca acaaagatgc accaatgcct ataatcaaag aatttctcaa
    18781 agcaaaaagc aaacgagaaa acaaatccct gcctaaaaaa tcagttccta agatataagt
    18841 aaaattagga gcttgatgca aattttctaa atgagtagtt aaaatatcaa aaggtgctaa
    18901 aaaaggtgca aataaagcac ataaaaataa aaatattaaa ggcgtaagaa tgataagaat
    18961 tttaaacaaa atcaagcctt cttaatctag gatttaaaat tctagctaca atatcactta
    19021 aaaatgtaaa aaatgctgca agtaaaacac taaaaaatat aagtgcaagt acaacagggt
    19081 aatctttaaa aataatactt ttaaaaagca aagttccaag tccctcgtaa gcaaagacac
    19141 tttctaccac ataagttccc atcataaaac ttaaagcact tccaccaaaa taagctacaa
    19201 taggacttaa agaatatttt aaaactaaaa aataaatatc tttttccttt aaagccctag
    19261 cgtataaatt ctgaataaaa atttgagaaa aactttcatt gataaaattt ctagcaattc
    19321 ttaaaaataa tgccaaatgt gataaaacaa gcaccaaaac aggcaaaatc aaatgttcta
    19381 agcgatttaa aaaatcatct tcaaagccta tatcactact tcccataaca ggcaaaactt
    19441 tccaaaaaat tccaaaaatc aaaacaaaaa ataaagccaa aacaaaagga ggtaaagcaa
    19501 aaaaattaaa agctaaaaag gtaatgattt tgtctataaa actttcctta taataatatc
    19561 ccaaaagtgc caaaaaaata ctaagtaaaa ataaaagcat taaggcacta aaacctaaaa
    19621 tcaaggtatt aaaaattctt tcttttataa gctttgtaac tttttctcca cttaaaaaag
    19681 aaacccctaa atctcctttt aaagccttaa aaagccaaat tttatactgc tctaacaaag
    19741 gcttattaag ccctaaattt tgttctattc tttgaataaa ttctttactt tgtgaattga
    19801 ttccattggc ataagctata ctccctttac taaaataaag caaaataaaa cacaaaaaag
    19861 tactaaaaaa tgctataaaa atactaaaaa ctaagcgttt tagcactcat ttactccatt
    19921 cataaatatt ccaagtaaaa cccactccat gatgacctaa agttcttgat ttgatacctt
    19981 ttaaatcttt attataaact aaagcaaaat caagataaac taaaaaaata aaaggaggat
    20041 tttcatataa agcgtctatg aaatctttat aatatttttt tctttctcct aaatttgaag
    20101 tatttcttgc cttttgtaag gctatatcca cttttttatc atgataatgt ccaaaattcc
    20161 agcctttatc gtttaaagca ctatcttgtg aactttcaaa cactctaaaa gtgtgaaaat
    20221 caggatccaa aggacttccc cagcctatta aaaaactatc tacttgagaa taatcaaagc
    20281 tcccagcagg tttagctacc accttactta caactccaat ttttttaaat tcactttgta
    20341 aaattcctgc taaactcact cttaaaggat cattgctcat cgcccaaatt tcaaattcta
    20401 aaattttccc atttttttcg aaatttccat ctttgttttt cttaaaaccc gcactcataa
    20461 gtaaatcttg ggctttttta ggatcatact tgtaagtttt aaaattttta ggatttaccc
    20521 aagaacgctc taaagggtga tttgctacaa aagcataatc atgtaaaaga ttttttacta
    20581 tactttcttt atcaaccgca taatttaaag cttgccttac ttttaaatct tttaaaaatt
    20641 cattattcaa attaaacatt aaagccctat aatcagctga tatttcacgc aaaatttcaa
    20701 aactagcatc atttttaaaa atattaagca aagaaacatc gattaaggct gcatctattt
    20761 tgccgttttt aagctcaaca ctggctatag aaggatcaaa aatatgcttt atgataagcc
    20821 ttggagtttt tattttacta agataaaagt gttcattagc tttaaattcg atatattcac
    20881 cttttttcca ttttacaaat ttataaggac ctgtacctat aggattttga ttaaaagaag
    20941 tggtacttaa attttcattt tcaagcaaat gcttaggaag tattcctatg cttagagcat
    21001 ctaaaaatgc gggataaggt ttaaaaagcg tgatttttag atgataagga tttaaaattt
    21061 ctatactttt aatatcttca aaattcacat aaactgaaga attgttcttg gtatttttaa
    21121 aagcttcaag gctgaattta acatcatcgg cgctaaattt cactccatcg tgccataaaa
    21181 catcatcacg caaaaagata tcatagataa gcccatcctt actcacgttc catgactttg
    21241 ctaaatcagg ttttaaactc atattttcat caaaacgcgt aagccctgaa aacacaagat
    21301 taatcactgc atcatgatcc tcactataag caggatttat cctagaaatt tcattttcca
    21361 cagctataat caaagtatct tttggaattt tggcctcaac attgaaaaat aataaaaata
    21421 ataaaacaaa caatctaagc acttgcaact cctaaaattt aaaattataa aattataaac
    21481 taaaaaacaa gagttcacaa gccctatagg gggataattc gcttttagat tttgaagttt
    21541 ttatatttat tctatgtcaa attgcttcac tgcattcatc taacaaatac gcaatatgct
    21601 gccaagatat acctgtagca tcgcttaatc ctatctcaca agtgcttgat gtgctaaatc
    21661 cgcgcttaat gtttgttttg gcataaaatt ttttaaagcc ctttgtggca ttaatgttta
    21721 atttaggatt taaaaaaccc ttatatccag caaatccaca gcaatatgta tcattatcta
    21781 ttaatatttt tccatttgtg catagctttg caagcttaac tatactttca tttaaaccaa
    21841 gttttcttgc agcacacata atatacaatc ctacatcctc attgatttta tcaatgcgta
    21901 acttaggtgc aataaatttt aataaatatt cacttaaatc ataaatttca tactttgcat
    21961 gattgctaat taacttagca ctacaagcac tatggtctaa cactataggt gagtctatat
    22021 tgcttaaaaa atcattgatt ttttgtatat ttttttcttg gatagcttga aaattctcat
    22081 aagccttacc gcagcataaa tcattggatg cataaattat gcctatattt gcttttttac
    22141 acaaactctc aaatacttct tgcaagcttc ttttatcatg cattttttca tttggtttaa
    22201 aacttttatt aagacagctt gtaaaataaa ctatattaca agctttttta taacttttta
    22261 gctcataatc gttcacctta ggcaaatacg ccctagttct tggtataata ctaataaaat
    22321 ttcttgcttt ttcaagctta ttatcaagac ttaaattatc aaatttattt gcgatgctta
    22381 atgaaaattt agcaattttt agagtttttt cgtgattttt atatgctaaa tttcccaaaa
    22441 ttttagacat aaatcctgta ttattttttc tatattttaa tgaaaaatca gcaaaattaa
    22501 tccccaaagg acatgaaaaa gagcaaactc cgcaagcagc acaagaacta tctactaaat
    22561 gattatagta tttttttatg tcctttaact ttacttttga cacattgtca tttaagcttt
    22621 caaggcgttt tatctctcgt aaaatagcaa ttctttgtct tggagtaatt gtgtattcat
    22681 tagatgggca aaacctttcg caaaatccac attccataca ggtatttaat ttctcatcaa
    22741 ttaaactggc ttgtttaata tttttcttat aaatatcttt atcattgcta atgattacat
    22801 cagggttaaa taaattatcc ttatcaaaaa tactcttgat ttttttattg atctcataag
    22861 cttgcttgcc ccactctact tctacgaaag gtgctaccat acgccctgtg ccgtgttcag
    22921 cttttatact tccaccatac gaagctacta tattagacat ttctttaact agatttgaaa
    22981 aattatcaaa ttcaagctca ttatttaaat ccggcgtaat gataaaatga atattacctg
    23041 ctaatgcatg gccaaaaatg attccattat cactaaaacc atatttataa aacaactctt
    23101 gaatacttct aattccatct gctagattct cgatattaaa gcacacatct tcagtgatta
    23161 ccgttgagcc tgcttttcta agactagctg ctataggcaa aagtgctttt ctaatcttcc
    23221 accataaatc atattcggcc ttattcttac taaaatatga cttataagat aatttagaaa
    23281 tttcttttat tttatttatg ttttcatcga gcttaaactc atcactatgc tcactttgaa
    23341 tcaatacaca agtattacct tctttaatat cagctaaaat atctcttaat tcatcataag
    23401 ttgatgcggc ttttaaactt gcatagtcca ttatttcagc agagcttata aaatcaactt
    23461 tagcaaattc ttttatagta ttcgcagcat cgttaatact gttaaaaaat aataaagcac
    23521 aggctttaaa ttccaaatca tccaaaacag caagtctaac ttcgcttaca aatcctaaag
    23581 tcccctcaga tccaataaac aaatgtgcta aaatatctat ctcatcatca tagtcaacaa
    23641 atgcatttag actataacct gttgtgtttt tgattttaaa ttttttaatt attaaatctt
    23701 ttaattcttg attggcatta atcttttctt tgatctctct aagttctttt attaattttt
    23761 tattctcatc tttaaactgt tccacactta aagcatcact ggtatcaagc atgctaccat
    23821 ttgccaaaat caccctaata cttcttaaag ttttataact attatcctta gttccacagc
    23881 acattccact tgagttattg tttacaatcc ctccaattaa agctgaattt atagtagctg
    23941 gatcaggtcc tatttttttc tttaaaaaag caaggctttc attagcatga atccctacta
    24001 caccacatcc taaagtgatt tcgctagcgt ctttgttaat ttttattttt ttaaaggcaa
    24061 atttaatcac tacaagcact ccatcacaag aactttgtcc acttaaactt gtacctgctg
    24121 ctctaaatga tattggggtt ttataagtat ttgctaattt aataacgtgc ttaatttcat
    24181 cttcattttt agcaataatc actatttttg ggatataaaa ataacacgac gcatcaatgc
    24241 cataagcata acatctagca taatcattaa aaattctatc ctcaaaaata tacttagcct
    24301 cattataaaa agctttaaaa tctgccataa tccctctatt aaatttatta tcaattataa
    24361 cttaataatt taaaaacaat tttaatttat atttttgagt gtaaatttaa ccgaagtcat
    24421 tttttatttg gattacaaag ttagaatacc atctattttc aaaaatttaa agaactaaaa
    24481 ggagaaatta tgacaaaaga acaaattcaa atcatcaaag attgtgtgcc tattttgcaa
    24541 aaaaatggag aggatttaac caatgagttt tataaaataa tgtttaatga ttatcctgag
    24601 gtaaaaccta tgtttaatat ggaaaaacaa atttcaggag aacaaccaaa agctttagca
    24661 atggcgattt taatggcagc caaaaatata gaaaatttgg aaaatatgag aagctttgtt
    24721 gataaagttg ccataactca tgttaattta ggggttaaag aagagcatta tcctatagtt
    24781 ggagcttgcc ttttaaaggc tattaaaaat cttttaaatc ctgacgaagc tactcttaaa
    24841 gcttgggaag ttgcttatgg aaaaattgct gaattttata tcgatataga aaaaaagctc
    24901 tatgataaat aatataagcc cattttgggc tttaatcaaa tttttctact aaatttttag
    24961 ctaattcttt gatattctca ccctttaact cactaatttc accattttga gctaagaaaa
    25021 ttctatcagc actatcaaaa tatgcatcat catgtgtgat agcaaagact gttttaccct
    25081 gctcttttaa caaaggtaaa agttttttat aaaaaaacct tctaaaaact ggatcttgat
    25141 cagctgccca ttcatcaagc actaaaatat ccctttcttc aagtaaagct ataagcatag
    25201 ctaaacgctt tttttgtcct gtagagagtt tagttaaggt aagttcatta tccttaacgc
    25261 ttgttttatc tttaagttct aaaaactcta accaaaaagc aattttttct tcacttgcaa
    25321 aattttcttt atttaaagtt ttagtaaaaa gatgaaaatc actaaaaaca gcagaaataa
    25381 gcgatctata ctcatctaaa tttttatcat ctacaagcat atcatcaaca taaattccac
    25441 ctttgcttgg cttaaaaagt cctgttaaaa gcatacaaaa agtagatttg ccacttccat
    25501 ttttacctat taaaaatact aattcacctt ttttaagctc tatatttaca ggatttaagt
    25561 gaaaattttc ttcataagta aattgagtat ttttgaaaga aatttttttc cattcgccaa
    25621 tatagcatgt tttcttaaaa ccttctatat agttatctaa ttccaatttt gtgatcttat
    25681 ccaaagcaat ttttgctaaa agcaaagtag gaaaagaccc tattatagat actaaagggg
    25741 ttcgcaaaaa taaaatagaa agagctatag ttgtagcatc tgcggcactt gcccattcaa
    25801 attttaaggc taagtaaaac tctaccccca ccaaagccaa aagagttaca tttgtccaat
    25861 tatttgaaag attgttaaaa agattgccta aagtactatt tttctttttc aatcttgcat
    25921 tattttcaaa ttcatcttca tagtaaagct tagctctgtc acgattgatt aaaagttctt
    25981 tatgtccatc tagtatattt tggtaattat tttgtaaagc atcatcattt tcccttgctt
    26041 tgcgaaaata ctgatacact ttcatcatta aaaaattatt agtaataaaa ataaccataa
    26101 tccataccac acataaagca aaaatttgtg gtgaaagata gcataaataa acactagtac
    26161 ataaaaccaa tatacttgat tgtaaaaaat caggcaatct taaaagccca aaagatatat
    26221 ttctcacatc acttcctaaa gaagctaaaa ttcttgcttt acctacctta gccactctta
    26281 acaaaggggt atctaagatc tgctttacta cgcgcctttg cattttaaag ataaaatttt
    26341 gcccaaaaat actaagtcca agttcgacta tagtagaact tataaaaaat atcaaaagca
    26401 aaacaataaa ataaaaaata ggaatatttt gtgcgttttt aagcaaataa tcattaataa
    26461 aaacaagagt caaaactcca acagtacttg taagaaaaga aaaaagtaaa aaagaaatca
    26521 actttaattt attttgctta agcaattcta taataaaagg catttataaa ctccaaaata
    26581 taattttaat tataacattt taggagtgat tatcaaattt tatcttttac cataaaaaca
    26641 gcacaaatag ctaataacgc taaaaaaatc atatacatac tcataccata taaaaatgga
    26701 ttttcatttt tagtcgcaag cgtattaagc caaaaagcaa gctgcggagt gacaccacct
    26761 gaaatcgcat aggcaatatt ataagaaaaa gaaattcctg aaaatcttat tttagcccta
    26821 aaaacttcac tcatcaaaat aggtgcaaac acattaatcc cacctaaaaa acaaatgaat
    26881 gaatataaaa tacacactaa aatcaaattt ttaagttcgt ataaagcata aaaatataaa
    26941 aaagaagaaa atacaaaagt caaagaaaag aaaatacaaa ttttaaataa accaaattta
    27001 tctacaagat aacctacaaa agcaccacct aaagctattc ctaaaattcc taatacctgc
    27061 aaataacttc cctcaactcc acttaaattt aaaatactag gcataaattt aggcattaat
    27121 aaaacaagca cgataacaca gcctgttaaa acccaagtca tcatcattga tgaaaataaa
    27181 ttttttataa tatccttttc tttaaataaa tctttaaatg gaaaagaact aagtgacgat
    27241 tctttttgca tttgtttaaa aataggagtt tcttgcaaaa atctgcgcaa ataaatagaa
    27301 ataatcccaa aaattccgcc cacaaaaaaa gcaatacgcc atgcataagt agcaatttct
    27361 tctacactaa aaaaagcatt aataattaaa aataccatac ttcccagtaa aatccctaaa
    27421 gccatagctg agtttaaaca gctcaaaaag aaagcttttt gtttttcttg acaatgttct
    27481 cttacaaaaa cccaagcccc aggtaattct ccacctatag ctataccttg aaaaattctt
    27541 ataaatataa gtaaaatggg agctaaaaat ccaagagttt cataacctgg aataaaagct
    27601 aaaacaaaag taggaagaac cataagcaaa atacttagca taaacatatt tttacgccca
    27661 aatttatctc caaaatgtgc cataactata ccacctaaag ggcgcactaa atatccagct
    27721 gcaaatgctc cataagtatt caataaagcc caaaattcgc ccatatcttt aggaaaaaat
    27781 acattagcta tatattcagc aaaaaagaca aaaataataa aatcataaaa ttctaaagtt
    27841 ccacccagtg aagaaagtcc taagatttta atttcttttg ttccaaattt tgattttttc
    27901 attgtttaat taccttaaat tttaaaaaca ttatttttat tatactacaa tcatttctaa
    27961 aatatcatcc aaaaattaag gataaatatg tttaatttta caaccactct tttaaaaacc
    28021 aatctctatt ttttagaaga aaaaccataa gcaaaaattc aaatcaaatc catataatct
    28081 ctcttaaaca atctgatgat gaatttttaa acttattatt ttcttttttg attccacaaa
    28141 atgatgaaga taaaaatttt atagaaaaaa ctcgtgaaaa aatcaaaaga aatgagcaca
    28201 atgttgtctt aataaaaaat ccaaatttta atgctttaat agacacagga tttttagata
    28261 ctattgatac attaaaagaa aaattacatt ttcacaaaac tgatttaaaa gatatcactc
    28321 atattatctt aacacacgca caccctgatc atataggcgc tttaatgagc gaagaaaatc
    28381 tttttccaaa agccaaaatt ttaattgata aaaaagaata tgatttttgg atcaaaagca
    28441 ataggcaaga gattaaaaac accttgctta aacttaaaaa tataaatttt atagatcatt
    28501 ctaaggactt gatttttaca aattcaggca ttaaagcctt acctgcttat ggacataccc
    28561 caggacaaaa tgctatcata attaacgata aaatagtctt ttggggagat ttacttcatc
    28621 tttatgatat acaaatccca aaacctaaaa tagctataaa attcgatata gatcaaaatg
    28681 aagctataca aacaagagaa aaattgctta aagaatttaa agaaagaaaa ctcaaagtta
    28741 taggaactca cgtacctttt agcgaaccta gatttttaga ttaattactt aaaaattaag
    28801 taaaaatttt aataattttt gctaaaatta tagccttttt atttcataag aaaggagaaa
    28861 attttggcaa aagatgatgt aattgaaatt gacggcaccg tacttgaatc attacctaat
    28921 gcaaatttca aagttgaact tgacaacaaa catgtaattt tatgtcatat tgcaggaaaa
    28981 atgcgtatgc attatataag aataatgcca ggtgataaag tcaaagtaga acttacacct
    29041 tatagccttg ataaagggcg tataactttt agatataaat aattctaagt tatttaaaag
    29101 ctaattttag ataaaattag agtttttgcg acaaattgca tcgaactata tgaagaagta
    29161 tttttaaaat ccaccactta ttttaaaaat agttggttat tcataaaacc tgatgtagtt
    29221 gtaaatcaag tggaatacat tcaaggagac gctcatgaaa gtgagaccat cagttaaaaa
    29281 gatgtgcgac aagtgcaaaa tagttcgccg taaaggcgtg gttcgcatta tttgcgaaaa
    29341 tccaaaacat aaacaaagac aaggataaac atggctcgta ttgcaggtgt ggatttacca
    29401 aagaaaaaaa gaattgagta tggactaacc tatatttatg gtataggact ttttgcttca
    29461 agaaaaattc tagataaagt aggaatttct tataataaaa gagttcatga gttaagcgaa
    29521 gatgaagcag cagctatccg taaggaaatt caagaaaact atatggttga aggggattta
    29581 agaaaacaag ttgctatgga tattaaagca cttatggatt taggaagctt tagaggctta
    29641 agacacagaa aaggcttacc agttcgcgga caaaaaacaa aaacaaacgc aaggactaga
    29701 aaaggtaaga gaaaaactgt tggtgcaaaa tcataaggat aaatcatggc aaaaagaaaa
    29761 atcgtaaaga aaaaagtagt taaaaaaaat atagcaaaag gtattgttta tatcagcgca
    29821 acttttaaca atactatggt tacagtaact gatgaaatgg gaaatactat cgcttggagt
    29881 agtgcaggtg gtttaggatt taaaggttct aaaaaatcaa ctccttatgc agcacaacaa
    29941 gcagtagagg acgctttaaa taaagcaaaa gaacacggaa ttaaagaagt aggcattaaa
    30001 gtgcaaggac cagggagcgg tagagaaact gctgttaaga gtgtaggtgc tatagaagga
    30061 atcaaagtaa ctttcttaaa agatatcact ccattagctc ataatggttg cagaccgcct
    30121 aagcgtcgtc gtgtctaaga tataagaaaa atttaggaga atattatggc aagatataga
    30181 ggaccagtag aaaaattaga aagacgcttt ggtgttagct tagcattaaa aggagaaaga
    30241 agactagctg gcaaaagcgc actagataaa cgcccttatg caccaggaca acacggagca
    30301 agaaaaggta aaattagtga gtatggactt caattaagag aaaaacaaaa agctaaattt
    30361 atgtatggag taagcgaaaa gcaattccgt cgtttatttg ctgaagcggc aagaagagaa
    30421 ggaaatacag gggtattact tatccaactt ttagaacaaa gattagataa tgtagtatat
    30481 agaatgggtt ttgctacaac acgtcgtttt gcaagacaac ttgtaacaca tggacatgtt
    30541 ttagtagatg gtaaaagagt ggacattcct agctttagag taaaagcagg tgctaaaatc
    30601 gaaatcattg aaaaaagcaa aaacaacccg cagataacaa gagctatcga acttacagca
    30661 caaactggaa ttgttgcttg ggttgatgtt gaaaaagata agagatttgg aattttcaca
    30721 agaaaacctg aaagagaaga agttgtcatt ccggttgagg aaagatttat cgttgagctt
    30781 tactctaaat aataggggtt aaatatgaga aatattacaa catctgctta tacgccaaca
    30841 gaatttacaa tagaaaatat tagtgatact gtggctaaaa tcagtgcttg gccttttgag
    30901 attggctatg gaattacact agcccatcct ttacgccgct tgctttatac tagcaccata
    30961 ggatacgctc caactgcaat tcatattgat ggcgtagctc atgaattcga tagtatgcgt
    31021 ggtatgcttg aagatgtagc actttttatt attaatctaa aaaaactacg ctttaaaatt
    31081 aaaggcgatt caaataaaga aatagtagaa tttaatttta aaggttcaaa agaaatttat
    31141 ggtaaagatc taaataatga tcaagtagaa gtagtaaata aagatgccta tttagcaaca
    31201 atcaatgaag atactgaact taaattcaca ttaatcattg aaaaaggtat cggctatgtt
    31261 ccaagtgagg aaatcaaaga acttttaaat gatcctaaat ttatagcttt agatgccttt
    31321 tttacacctg taagagaagc aacttatgat attgaaaaag ttttatttga agataatcct
    31381 gattatgaaa aagtagtttt aaccgtaaca actgatgggc aaatcactcc aaatgaagct
    31441 tttcaaaatg ctttagaagc tatgtataaa caactatcag tatttgataa aatcactaat
    31501 gttagaagtg caattaaaaa tcaagcaaca agcaatgaat tagaaaatac taaattattg
    31561 caaaacatca cagatttaaa tttaagtgct agaagttaca attgtcttga aaaagcgggg
    31621 gtagtttaca taggcgaact tgctttaatg agtgtaagcg aacttgcagg acttaaaaat
    31681 ttaggtaaaa aatctcttga tgaaattaaa aacattatgg aaagcatagg ttttcctgta
    31741 ggaacttcta aacttagtga taacaaagaa atacttaaaa ataagatcgt ggaattaaaa
    31801 gcacaaaacg aaggataaag aatgagacat aaacatggat atagaaaact tggcagaact
    31861 tcatctcatc gtgctgcctt attaaaaaat ttaaccatag ctttagtaaa tagcggaaaa
    31921 attgaaacta cactaccaaa agctaaagaa ctaagaggct atatagaaag attgattaca
    31981 agagcaagac ttggagattt taacgctcat agggcagttt ttgcttcttt acaagataaa
    32041 aatgctacta ataaactagt aactgaaatt gctccaaaat tcaaagatcg caatggtgga
    32101 tatacaagaa tcatcaaaac aagaattcgc cgtggtgatg ctgctgaaat ggcttttatc
    32161 gaatttgtag cctaatacaa atcctagctt ttgctagg
//
LOCUS       DAPWAA010000011        31763 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.011, whole genome shotgun sequence.
ACCESSION   DAPWAA010000011 DAPWAA010000000
VERSION     DAPWAA010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 31763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31763
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.011"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            165..581
                     /locus_tag="RTF91_000476"
     CDS             165..581
                     /locus_tag="RTF91_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HDZ4943399.1"
                     /translation="MKAKLTLLALLGATVLLAKDMVVPTSELPNNAKEFISKNFKTAQ
                     ISLVKKDIDSYDVILNDGTEIDFMINGEWKEVDGKYKALPHTILPSVMEKVSATQPNA
                     QILEVDKEINGYKFKFNNNIKVYTDMQGNVLGQKLD"
     gene            832..2082
                     /locus_tag="RTF91_000477"
     CDS             832..2082
                     /locus_tag="RTF91_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HDZ4943400.1"
                     /translation="MNTPKWTSHDTRWVLSLFGTAIGAGVLLLPISAGLGGLIPLLII
                     LVLAFPMTYLAHRNLCRFVLSSSNPKDDITFVAESYFGKGGGFLITLLYFFAILPILL
                     VYSANLTTTLLEFLINQFNFNADLIYAARWWIGFLIVGVLILISILGENVVTKAMSFL
                     VFPFIIFLFIFSLLLIPQWNSSLFTNVDLSIISTSNFWVTLWLVIPVMVFSFNHSPII
                     SSLACYCKKEYGDYAEPRARKIISLAVVLMVFVVMFFVFSCALTFTPEDFTSAKDQNV
                     NILTFIANKFPEVSLLAYVGPIVALVAISKSFLGHYLGSQEGLNGILYKASNGKIQGK
                     LAQTLTAVITFAIAWLVAYKNPSVIGIIEAIGGPVLAILLFLMPLYCIYRFDILAKFR
                     NKFLDLFILVMGIVAISAAIHNLL"
     gene            2097..3461
                     /locus_tag="RTF91_000478"
     CDS             2097..3461
                     /locus_tag="RTF91_000478"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDZ4943401.1"
                     /translation="MSNLSIFKIGVGPSSSHTLGPMLAGNLFCKKVAKKLDEINRVEV
                     TLYGSLSLTGKGHLSDKAVIWGLNGLEAKNLSAAIQDEVNKNAIENAQIDFCGEKKLS
                     FNYEKDLIFSKDFLPLHENGMKIKAYDCKGALVDEETYYSVGGGFVLTAAELEKEGKN
                     SNQNKKKKLDIELNNAKEALELCDKRDWDLAELSYRYELQFHTKEEIRAYCLEIWEVM
                     QEVYYNGTHPNEDYLPGKLHLKRRAKGLKKRVAMTADPMGIIDFISLYAIAIAEENAS
                     GAKVVTAPTNGACAVIPAVMLYLKNHTIGFSDEKAIEFLLTAMLIGSFYKKNASISGA
                     EAGCQAEIGSASSMAAAAMATVLGANAFKACNAAEMAMEHHLGLTCDPVAGLVQIPCI
                     ERNAFGAIKAISAARMTMTRKSTPMVSLDEVIETMYETGKDMNYKYKETSLGGLATNL
                     KTVC"
     gene            complement(3469..3990)
                     /locus_tag="RTF91_000479"
     CDS             complement(3469..3990)
                     /locus_tag="RTF91_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943402.1"
                     /translation="MAFTNFSGFFYARNDLRLFKIEKKNELKSFFYKDYTLASYKDDL
                     NLNNEIFFYQSLKECLFKENDEILISNLGKKIILFRNFTQNCDNFNEAKLKQILLLFF
                     LLLASIFFASLAAINEFGAIDLMFLMICLLLLVMGIINLGLLLKQIRILKSFSKEEMK
                     EFLSQRMKKYTKV"
     gene            complement(3971..4951)
                     /gene="ribD"
                     /locus_tag="RTF91_000480"
     CDS             complement(3971..4951)
                     /gene="ribD"
                     /locus_tag="RTF91_000480"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDZ4943403.1"
                     /translation="MKEFYMNLALNEAWKYQFLTYPNPAVGCVILDKNGKILAIKAHE
                     KAGFAHAELNTIAHAFKNLNPEISLPKEANAMHKFICKNHRGIFKDSIAFVTLEPCSH
                     QGKTPPCAKLFSDLGFKKVFISVKDENKVASGGADFLKKQGIEVEFGILEEEGKKLLK
                     PFLKWQKEQFKLFKLALSMNGSPFGKIVSNELSRTYAHKIRAVIDLLVVGGETIRKDR
                     PILDARLCKAKVPDLCILSRQNLENFDKNIPLFKVPNRQIYTQIPSETKFLMYEGGEN
                     FLKIFKDEMDMFLIFQSSSLNDKKNVTIPLNFKPLYRNFLGSDTYGIYEL"
     gene            complement(4968..5147)
                     /locus_tag="RTF91_000481"
     CDS             complement(4968..5147)
                     /locus_tag="RTF91_000481"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943404.1"
                     /translation="MKKYFSLFIFLLLLNPNQASEITLKLKLYEKTMADMIRKIRNVS
                     RKVKIYYLATNNIKF"
     gene            complement(5207..5294)
                     /locus_tag="RTF91_000482"
     tRNA            complement(5207..5294)
                     /locus_tag="RTF91_000482"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5258..5260),aa:Ser,seq:tga)
     gene            complement(5315..5388)
                     /locus_tag="RTF91_000483"
     tRNA            complement(5315..5388)
                     /locus_tag="RTF91_000483"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5354..5356),aa:Cys,seq:gca)
     gene            complement(5407..5495)
                     /locus_tag="RTF91_000484"
     tRNA            complement(5407..5495)
                     /locus_tag="RTF91_000484"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5459..5461),aa:Leu,seq:taa)
     gene            complement(5505..5579)
                     /locus_tag="RTF91_000485"
     tRNA            complement(5505..5579)
                     /locus_tag="RTF91_000485"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5545..5547),aa:Gly,seq:gcc)
     gene            complement(5651..6403)
                     /locus_tag="RTF91_000486"
     CDS             complement(5651..6403)
                     /locus_tag="RTF91_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943405.1"
                     /translation="MLAFFKGLGIGFLCLLLFVAGVVFNVEFLGKKDSNHDLYFSRNI
                     EVSNTLKPDILYTNINFWGKENLISKITLDNGEKAEIANTFNQILERSRKENFCSGGS
                     FSLEPNFSYKDGIQTPKGQRFDANLECEFKENQLADFNKLLNDINSIIAKNNFIDVST
                     PAIQTKFSKDTLNNNKENLYKELLKTSYEYEKTYSLDLNKTCILKNLQVNTNANITPR
                     ILNAKSDNIELSSPIINEKEQILSAKALFICK"
     gene            6478..7497
                     /gene="mutY"
                     /locus_tag="RTF91_000487"
     CDS             6478..7497
                     /gene="mutY"
                     /locus_tag="RTF91_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDZ4943406.1"
                     /translation="MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDR
                     AYGVYISEIMLQQTQVKSVLERFYFPFLKKFPTLQSLANANEDELLKAWQGLGYYTRA
                     RNLKKAALECVDKFGANLPKELHDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRV
                     LSRLFALENPSMKELEKRAKELLNLNHAFDHNQALLDIGALLCVSKNAKCGICPLYDF
                     CQGKFNTELYPKAKKILYESVNLNLFLFEFNKKFAIQQSQDKLYKGMYNFPFSKEGEY
                     KLSKDMRFIGEFKHSYTKYKLNIKVYHQILNNESKNYQFKTLKELESTALSILSLKAL
                     KLIKF"
     gene            complement(7483..8724)
                     /locus_tag="RTF91_000488"
                     /pseudo
     CDS             complement(7483..8724)
                     /locus_tag="RTF91_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344988.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            8891..9745
                     /locus_tag="RTF91_000489"
     CDS             8891..9745
                     /locus_tag="RTF91_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/SPASM domain-containing protein"
                     /protein_id="HDZ4943407.1"
                     /translation="MKFKKIYIELSDICGLKCDFCPSQKAVRGVMSEDKFQNLAYEIS
                     TKAEFFTFHLLGDPLLLPNLENYLKIAKDQAMKLEITTSGFYLGSKNQALLLKYDNIH
                     QINISLMSFLSQSKISLEQYFKPILELCKKHLEQQSSSFINLRLWNLDLNFKAPKSNL
                     KIYEFLAKEFEVEIDTSLSKNRLQRHILLHQNKVFKWPNLKDEPLYKKGKCHALKEQV
                     GILSDGSLVPCCLDTRADIKLGNVFENNFNKLLKSPRVEMIKKAFEEDKRIEKLCQTC
                     EFFKARIE"
     gene            complement(9746..10552)
                     /locus_tag="RTF91_000490"
     CDS             complement(9746..10552)
                     /locus_tag="RTF91_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDZ4943408.1"
                     /translation="MKKILIIISLFLITLNAKERLVVLDPASIETLFMLNADDQIVGI
                     ANLQHSNIYPEDKTSKLTSVGTFSNPSLEKIVALKPSLVILSSYSLNLEEGLKNFGIK
                     SINLKAERLEDIINNITILGQIANKEKQAELLKQEFTQNLKKLSDKPLNKSAIYLYSS
                     NPLMAFNDNSLMTDILRLIGIKNLSPQSQISRPVISAEYILKQNPDILILGVNAKNDL
                     LNTNTLLKNTKAAKTGSIYFNKDTYILLRLSPKIIDRIQKFKTKLENNNL"
     gene            complement(10549..11325)
                     /locus_tag="RTF91_000491"
     CDS             complement(10549..11325)
                     /locus_tag="RTF91_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943409.1"
                     /translation="MLKIQDLSFAYHKKDLLKNIHLELKNQAFIGILGPNGSGKSTLL
                     KLILKNLNPNKGEISLFDTNIKDFSLKEFAKICGFVPQKSELNTPLKVIDVLLMSKYS
                     NLKHAFSSYSKEDIFEVKEFAKDLKLENFLERSILSLSGGEFQRMLLARALLKKPKIL
                     FLDEPTSALDLNYAIELLSLCERLVKEKNIAVVAILHDLNLASIFCDKILFLKEGEIR
                     YFGTSKELFTQEILKEIYDLNCEIVYKNSKPYILALKEKK"
     gene            complement(11325..12311)
                     /locus_tag="RTF91_000492"
     CDS             complement(11325..12311)
                     /locus_tag="RTF91_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDZ4943410.1"
                     /translation="MLNLNMHSKNLVIIGILIAYIITSFTALCLGDENLSPKELFSYI
                     FNQDEILRQIIINGRLPRIIMAILIGMLLASSGAITQNVFSNPIADPYIIGIASAATF
                     GAVLAYLLKLSDYYYGILGFVCSAFFALAVFKISSKTSIATLLIIGIAASSFLGAFTS
                     FFTYLIGEDSFKIVAWLMGNIGNASWFRVGILILPLTFCLFYFYAHKNELNILLSGDD
                     EARNLGVNAQKLKINLLIVSSLAVSFAVAFSGLIAFVGLIIPHTIRLLLKNYDNALVI
                     PLCTALGGLFLLICDTLARTLLAPVQIPIGILTAFFGAPIFLYLALNARRFL"
     gene            complement(12286..14406)
                     /locus_tag="RTF91_000493"
     CDS             complement(12286..14406)
                     /locus_tag="RTF91_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDZ4943411.1"
                     /translation="MHPNKKFLSLSLFTLLTTHLNAQELNEAIKLQKIVVSATGFEQD
                     ADSNLRNIISIEGKDLQNKGYISLEQALERISGISFINFGLGRNIDMRGQGNKSNIAV
                     KVMIDGRAINVLDNSHGVTPLESINLDNIERIEIIPGGGSVLYGSGTRGGVINIITKK
                     QKSDAFAINFKSSSYDHGRLSGNLGINGAKQINENLAFSFDIQSFNHDGYQEGYNKKG
                     YFINTKTYIDFNDNSDLTLVYNYFKSKNTSSGYLTKAQAQSDPTQKGSNDNITQINRP
                     EISLDYHYYNDMWEFNLETFWQNQKINYLKDEISMMGTTAYQNGSGFEDTLTGIALKN
                     KLNYANNSYFIFGYEFANHDAKRKSLVYYSVPGIINYHRMTTLMDMTKQSHSIFALDS
                     HNFNDFFTLSGGARYEFSTYSTDRSYRNEMSMNGRPPSPTIIDTTTLFNTDKNTHNFA
                     LEITPNFKYSDTGNLYLKYERGFVSPTPAQFVNRNKTGTNLPPYSSSNLKAEIFDTFE
                     LGIDDFWWDFYGFNLTLFYTLSKDEISYLGNPHSTSGSWWKYYNIDQTRRLGVELSLS
                     QNFLNDDLIFRESLTYLDAKISKGINDGMRIPYVSKIKATAGLEYAWNKNFSNFIDLT
                     YFSRAKDGGTIDENTGKMSKNSWTRDYFLTDIGMRYDYKNYKILAGIRNLFDKRYYTY
                     QDSINDQYLVGNGRNYYVEFKYAF"
     gene            14602..15357
                     /locus_tag="RTF91_000494"
     CDS             14602..15357
                     /locus_tag="RTF91_000494"
                     /EC_number="1.14.14.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HugZ family heme oxygenase"
                     /protein_id="HDZ4943412.1"
                     /translation="MNFESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGL
                     DLVYNNKENLRVEFPKKADENTIKDTIISLCMSAKTEQNFNGVEKELNEFMLSFNSVS
                     LATLNANGEVVCSYAPFVSTQWGNYIYISEVSEHFNNIKANPSNIEIMFLEDESKAAS
                     VILRKRLRYRVNASFLERGERFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKG
                     RFVKGFGQAYDIENGNVAHVGASGNPHKFPHKH"
     gene            complement(15373..16440)
                     /gene="prfA"
                     /locus_tag="RTF91_000495"
     CDS             complement(15373..16440)
                     /gene="prfA"
                     /locus_tag="RTF91_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDZ4943413.1"
                     /translation="MLASKLDPFLKRFEELNSLLSNSDILSDISKMTTLSKEQKNLEP
                     IVLKAKEYLKTLENIEENKALLNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDP
                     NDEKNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSMGGFKEII
                     MLVKGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDL
                     KVDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYE
                     MQESERLAKESEARKSQVGSGDRSERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLF
                     DEIIEPLITHHQAQTLQEQNL"
     gene            complement(16459..16722)
                     /gene="rpsT"
                     /locus_tag="RTF91_000496"
     CDS             complement(16459..16722)
                     /gene="rpsT"
                     /locus_tag="RTF91_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDZ4943414.1"
                     /translation="MANHKSAEKRARQTIKKTERNRFYRTRLKNITKAIREAAANGDK
                     NAANEALKVANKSIHAMVSRGFIKKQTASRRVSRLALLVNKIA"
     gene            complement(16801..17301)
                     /locus_tag="RTF91_000497"
     CDS             complement(16801..17301)
                     /locus_tag="RTF91_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HDZ4943415.1"
                     /translation="MQKLFLTFFYSGCIKKASGTFGTISALIPAFFILKYLGINTLFL
                     LSILIFVASIRVIDDYEKKTGIHDDKHIVIDEVAGVFIACAIAASVENSIINFILAFI
                     LFRLFDITKPSIIGKVDKKVKGGLGVMLDDMLAGLFAGLLSAVIYGFLLKFNLVSWDI
                     NLKDLF"
     gene            complement(17306..18466)
                     /locus_tag="RTF91_000498"
     CDS             complement(17306..18466)
                     /locus_tag="RTF91_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HDZ4943416.1"
                     /translation="MKSVRKNKNIIIDQNEFGVLSLIKEGLLGSCTHLMNEKEVNEII
                     KSGKFKGESFPYPLSFAPKNAEEALDNIKSGNKIELMLDKKVVGHIDFKSKFKNNKNF
                     SDIFSTNTCSLEDMGTTCISGKIEIYNSQIKKIKENFQQTKNNLNARKVTAIVSSLDP
                     LHRAHERIFHWTIDKADLVVIFLVESFDTNGFEFELKEAYLKKFIQNYLPPDRIFIFP
                     LKNINIFHAHLNPGLESIIAKNLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYG
                     IEVIVLPEFVFCDQCRMIVSTRSCPHGCHHHLHYNSQSLKDLLRAGIIPPAIFMRKEV
                     SSVILTSLFPNRLKNMQKIYNELFPTDGILEYKNDEEFYQKLLEIHQMSYMV"
     gene            complement(18444..19331)
                     /locus_tag="RTF91_000499"
     CDS             complement(18444..19331)
                     /locus_tag="RTF91_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDZ4943417.1"
                     /translation="MKVLIIENEIYLAQSISIKLSDAGYSCEIISSFDKYNGEKYYDI
                     VLLSTNTNNFLKAVGQFKHSIIILLISYISTDTVLIPLKLGSSDYIQKPFMIEELIRK
                     IKHYQDFRKLSILNKAYQSYIKSRLETIKIPEYNYKKLKLPLILKSNKQSSADAFVFN
                     YANECDITLSFIDLTSTNSVEKVMKFPTENNLLFLSNFQALKATEKEKLLDFIQNKTV
                     ILHTNSSTDDLKINCINLNDNEKNIDSNEILTIDEYVKYVIINYQNIFPDTDLSKKLG
                     ISRKSLWEKRKKYEISKKK"
     gene            complement(19328..20443)
                     /locus_tag="RTF91_000500"
     CDS             complement(19328..20443)
                     /locus_tag="RTF91_000500"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HDZ4943418.1"
                     /translation="MSEISLIMLAAGNSTRFNAKVKKQFLRLENDPLWLYATKNLSSF
                     YPFKKIVVTSSNTAYMKKFTKSYEFIEGGDTRAESLRKALELIDSEFVMVSDVARVLI
                     SKNLFDRLIENLDKADCITPALKVSDTTLFDNEALQREKIKLIQTPQISKTKLLKKAL
                     DQNLEFTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLNLPKPSFEIFTGNGFDV
                     HEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMK
                     FKNANSMELLKQAYNKVKEVGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLNLDEF
                     RINVKATTTEKLGFIGRKEGMAVLSSVNLKYFDWTRL"
     gene            20564..21670
                     /locus_tag="RTF91_000501"
     CDS             20564..21670
                     /locus_tag="RTF91_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HDZ4943419.1"
                     /translation="MKEQILEKLKTVKYPGFEKDIVSFNFVKDIKIQDNGVLIDIEIV
                     SANPEVANEIRKNVNEALSSLALKNIELNIIVPKIPEEKSNSRSGKNIAPQVKNFIMV
                     SSGKGGVGKSTTTVNLAISMAKMGKRVGILDADIYGPNIPRMLGETKTQPEVVGQRLK
                     PILSHGVYMMSMGVLIEEGQGLMWRGAMIMKAIEQLLADVIWPELDVLFLDMPPGTGD
                     AQITSAQSIPITAGVCVSTPQTVSLDDSKRALDMFNKLHIPIAGVIENMSGFLCPDNG
                     KEYDIFGKGTALAMAEAYKSEVLAQIPIEMIVREGADEGKPVSFYHPESVSSKRYLMA
                     AEKIWNFIEKINNEGGVDNSAIQPVMNGKSACSH"
     gene            21696..22856
                     /locus_tag="RTF91_000502"
     CDS             21696..22856
                     /locus_tag="RTF91_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-carboxylate
                     N-succinyltransferase"
                     /protein_id="HDZ4943420.1"
                     /translation="MINTKEDFLLLIKQIEQKSGYKKPKAFGIARLDRGQLNKNKILQ
                     ASFALINYEQNFGSAAIMLEAFMQRGIEIDFNASEFVQTLKLEDIDFALSCFKPFLEE
                     EGHQNIDLLKIVKDKFKDDEFAFVCLFEDKEPLSVESVYLKLYLLSTKKVPLRSINLN
                     GAFGILSNVAWSDDKPIELEYLRVNEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTR
                     ILESSKVRMGAFLAAGTTIMPGASYVNFNAGTTGACMVEGRISSSAIVGEGSDVGGGA
                     SILGVLSGTSGNAISVGKACLLGANSVTGIPLGDNCIVDAGIAVLEGTKFLLRDGEEL
                     AKLNPNFDFSKEIYKGLELKGLNGLHFRQDSISGAMIVALNKKAVKLNESLH"
     gene            complement(22881..23504)
                     /locus_tag="RTF91_000503"
     CDS             complement(22881..23504)
                     /locus_tag="RTF91_000503"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDZ4943421.1"
                     /translation="MQNFKELNEKITWQKVDNLLPVIIQDAKTCEVLMLGFMNNEALE
                     KSLESGKVVFFSRTKQRLWMKGEESGNFLNIVDLSLDCDNDTLLILANPIGPTCHTGD
                     ISCFEKISKNADFVFLARLEKLINSRKNADENTSYTAKLFKSGTKRIAQKVGEEGVET
                     ALAATIKDKEELICEAADLMYHLSVLLADANLNFSDVISKLKERHKA"
     gene            complement(23506..24273)
                     /gene="hisF"
                     /locus_tag="RTF91_000504"
     CDS             complement(23506..24273)
                     /gene="hisF"
                     /locus_tag="RTF91_000504"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDZ4943422.1"
                     /translation="MLTKRIIACLDVKDGRVIKGTQFKNHKDMGDIIELARYYSENGI
                     DELVFYDIAASARKERISREWVSEVAKNINIPFCVAGGIKSEEDAAELLANGADKISI
                     NSPALNDPSLITRFAKSFGVQCVVVGIDSFKDEHGNLKVFQYTGDEKTSKHSGKSTLE
                     WVKEVQDLGAGEIVLNMMNQDGVKSGYDLEQLQAVYEICKVPLIASGGAGKMEHFLEA
                     FKLGVDGALAASVFHQKLIDIKELKIYLKNQGLSIRI"
     gene            complement(24274..25233)
                     /locus_tag="RTF91_000505"
     CDS             complement(24274..25233)
                     /locus_tag="RTF91_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrgA protein"
                     /protein_id="HDZ4943423.1"
                     /translation="MSNKLSYKELALEILKQSDKPLSVNEIWQKALDKGLDKKLSSIG
                     QTPIATLGARIYVDIKELQHNSLFIKVSQKPRTFWLKEKENEVLKLDNKNEITNEKQE
                     KNKFHERDLHPLLVKFLYENLDFNLNCKTIYHEQSKKGKGGEDKWNYPDIVGVYFPYD
                     DYEKETITLLENIKQNSYKLFSFELKIALNFSNLKECYFQAVSNFSWANEGYLVVLKK
                     IDSEVLSELRRLNQSFGIGVIKLESNDLLNSKIILSAKEKELDIQTLNMLINKNPNFK
                     EFIDNINKQIKVGKEAKIQANFDEIKSDEEMEKYLKEKCILEK"
     gene            complement(25218..25949)
                     /gene="hisA"
                     /locus_tag="RTF91_000506"
     CDS             complement(25218..25949)
                     /gene="hisA"
                     /locus_tag="RTF91_000506"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDZ4943424.1"
                     /translation="MTQIIPALDLIDGEVVRLVKGDYKQKKVYRYNPLEKFKEYEKAG
                     AKELHLVDLTGAKDTSKRQLALIEKLAKEVSVNLQVGGGIRSKEEIKALLDCGVKRVV
                     IGSMAIKNAALCLEILKEFGNEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFY
                     SNKGLKHILCTDISKDGTMQGVNVRLYKLIHEIFPHICIQASGGVASLEDLKNLKGIC
                     SGVIVGKALLDGVFSVEEGIRCLTN"
     gene            complement(25946..26533)
                     /gene="hisH"
                     /locus_tag="RTF91_000507"
     CDS             complement(25946..26533)
                     /gene="hisH"
                     /locus_tag="RTF91_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDZ4943425.1"
                     /translation="MKIIIIDTACANLASLKFCLDRLGFNATISRDLKELESADKLFL
                     PGVGTAKEAMKNLEQFNLIDFIKNTKKPLLGICLGMQILGNFSEELNQETLKLIDFTT
                     QKFKVKKGFTFPHMGWNQIYSSHALFKGLEGAYFYFVHSYYVELGEYTIADCEYSQKF
                     SASIMKDNFYGVQFHPERSSEAGEILISNFIKDIG"
     gene            complement(26530..27609)
                     /locus_tag="RTF91_000508"
     CDS             complement(26530..27609)
                     /locus_tag="RTF91_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDZ4943426.1"
                     /translation="MQKDIIFQGNCLEILKTIPDKSINLIFADPPYFMQTQGELLRTN
                     GEVFSGVNDDWDKFESLKAYDDFCKIWLSECRRILKDDASIWVIGSFQNIFRLGYIMQ
                     DLGFWILNDIIWNKPNPVPNFKGTRFCNSHETLIWCSKHKNSKYTFNYKTMKFLNNNK
                     QEKSVWNIGICIGNERLKGIDGKKIHSTQKPEILLEKIILSSTKKGDLILDPFFGTGT
                     TGAIAKKLGRYYIGIEQEKFYVKIAESRIRQINIIDNEITRNELETKPPKVSLEELLN
                     AGFLSENEKFYDKNKNYICYLVNGNKVSDENEILSIHKMAAKYLNKENHNGWSYFYIF
                     KNENFISIDSLRYEYKNFINLEGVI"
     gene            complement(27655..28413)
                     /locus_tag="RTF91_000509"
     CDS             complement(27655..28413)
                     /locus_tag="RTF91_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HDZ4943427.1"
                     /translation="MTYQNFKNKLDTKIFGEDLNYEILLTVLNNPKRYIGLFRITNAK
                     TKLIQNITQSCEIKFGDFIEEILSEYIIEMGYKALDKNIGFDEENNKLNADQVFNDEH
                     NIYLIEQKIRDDHDSTKKRGQYANLIKKIKALKQKFSNYRIIACMWFSDDSLKKNKKF
                     YEEQINNNTDEKVDIFIFYGKELFENLFQRIDIYNELISHLKKNKQERSKDILNVPDF
                     DISEEIKNALLKTKKNYPKINTKATFRQRRICRT"
     gene            complement(28410..29468)
                     /gene="hisB"
                     /locus_tag="RTF91_000510"
     CDS             complement(28410..29468)
                     /gene="hisB"
                     /locus_tag="RTF91_000510"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HDZ4943428.1"
                     /translation="MNQKILFIDRDGTLIEEPKSDFQIDTLEKLRFEKDAIPALLKLK
                     NFGFKFVMVSNQDGLGTQSFPKENFEIAHEKMLDILQSCGIEFQDIFICPHFENENCA
                     CRKPKTAMLEEYIKHELYDKEQSFVIGDRDSDMVLASNLGVHGLKYGELSWKDIENEI
                     LSSFRSASYQRTTKETDIKVKVCLNGGKIEIKTGIDFFDHMLEQIAVHGGIGLEISCK
                     GDLEIDEHHSVEDVALALGACIKKALGDKIGIARYGFVLPMDECLASCAMDFCNRPHL
                     VYKAKFKKSHLGALSTEMIEHFFYSLSYTMGVSLHLKVKGKNDHHKAEGLFKAFAKAL
                     KMAVKIESENLASSKGVI"
     gene            complement(29465..30751)
                     /gene="hisD"
                     /locus_tag="RTF91_000511"
     CDS             complement(29465..30751)
                     /gene="hisD"
                     /locus_tag="RTF91_000511"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDZ4943429.1"
                     /translation="MQILVYDNLDEKQKKEALKRPAISAKDEISKIVSSIIKEVQEKG
                     DQALIEQALKFDKAKISNIKITQEEITQASKHLAKDLQEAILVAYENIKKFHEAQIPH
                     EIALETTKGVKCEILTRPIEKVGLYIPGGLAPLFSTVLMLAIPAKIAGCEKIVLASPA
                     KINDAVLFCAKLCDVDEIYQMGGAGAIAALAYGTQSVLKVDKIFGPGNAFVTEAKRQV
                     SSDINGATIDMQAGPSEVLVIADDLANEKFVASDLLSQAEHGADSQVILVCLSESFAK
                     KASDEVQKQLELLPRKELASKSITNSRIIIAKDLNQALEISNLYAPEHLIIQTQNPRE
                     LLKGVKHAGSVFLGAYSPESMGDYASGTNHVLPTYGLTKTHSSLGLADFSKRMAVQEL
                     SKEGFLALGKSVEILAQNEHLDAHKNAVTFRLESLK"
     gene            complement(30758..31657)
                     /gene="hisG"
                     /locus_tag="RTF91_000512"
     CDS             complement(30758..31657)
                     /gene="hisG"
                     /locus_tag="RTF91_000512"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDZ4943430.1"
                     /translation="MQENTRLRIAIQKSGRLSKESIELLSECGVKMHIHEQSLIAFST
                     NLPIDILRVRDDDIPGLIFDGVVDLGIIGENVLEENELERQSLGENPSYKLLKKLDFG
                     FCRLSLALPQEKKFQSLKDFEDLRIATSYPQLLKRFMKENAINYKNCMLTGSVEVAPR
                     ANLADAICDLVSSGATLQANNLKEVKVIYESRACLIQKENALSKEKQALVDKIMLRVA
                     GVMQARESKYIMLHAPKEKLDKIQALLPGAERPTILPLAHDEKNVALHMVSKENLFWE
                     TMEALKEEGASSILVLPIEKMLK"
BASE COUNT        10516 a         4904 c         4719 g        11624 t
ORIGIN      
        1 ttatcataat ttcttaagaa atttttgttt tatagttttt atttttcaaa agttaagtca
       61 taagtcttga aaataaaagc ttaaaaatta ttttttaggt ttcacattca cttcacaatt
      121 ttaagttaaa ctttcacgaa tctaagacaa aaaaaggaga aattatgaaa gcaaaattaa
      181 ctttacttgc tttgttgggt gctacggtgc ttttggctaa agatatggtt gttcctacga
      241 gcgaacttcc aaataatgct aaagaattta tttctaaaaa ttttaaaacc gctcaaatta
      301 gtttagtaaa aaaagatata gattcttatg atgtgatttt aaacgatggc actgaaattg
      361 attttatgat caatggagag tggaaagaag ttgatggaaa atacaaggct ttgccgcata
      421 ctattttacc tagtgttatg gaaaaagtga gtgcaactca gccaaatgct caaattcttg
      481 aagtagataa agaaattaac ggttataaat ttaagtttaa taacaacata aaagtttata
      541 cagatatgca aggaaatgtc ctaggtcaaa aattagatta attttttgaa aattttaact
      601 tccttagaaa atttggaagc atagtcttcc aaattttatt ttttgattat aaaattaaaa
      661 atatatttag ctttaaaata atactttaaa ttaatgcaag tgattgtttt ttataaaatt
      721 aaatttacaa aatgttacat aagatttaaa atattttttt aaaaaataat tatttataaa
      781 tattttgata aaatataaaa agatgcaatc ttaaattttt aaggaagaat aatgaatact
      841 cctaaatgga ctagtcacga tacaagatgg gttttatctc tttttggaac agctattggg
      901 gctggcgtac ttttgttacc tattagtgct ggacttggtg gattaatacc tttgctgatt
      961 atacttgttt tagcttttcc tatgacctat ttagctcata gaaatttgtg tcgctttgtg
     1021 ctttcaagtt ctaatccaaa agatgatatt acttttgttg cggaaagtta ttttggcaaa
     1081 ggtggtggat ttttaattac acttttgtat ttttttgcta ttttgcctat tttattagtt
     1141 tatagtgcta atcttacaac aactttactt gagtttttaa tcaatcaatt taatttcaat
     1201 gcagatctta tttatgctgc tcgttggtgg ataggttttt taatcgttgg agttttgatt
     1261 cttatttcta ttcttggtga aaatgttgta acaaaagcaa tgagctttct tgtttttcct
     1321 tttattatat ttttatttat tttttcatta cttttaattc cgcaatggaa ctcatcatta
     1381 tttacaaatg tcgatctttc tataatctca acaagtaatt tttgggttac tttatggctt
     1441 gttattcctg tgatggtttt tagctttaat cactctccta ttatttcttc acttgcttgt
     1501 tattgtaaaa aagaatatgg tgattatgcc gaacctcgtg ctagaaaaat tatttcttta
     1561 gcagttgttc ttatggtttt tgttgtaatg ttttttgttt tttcttgcgc cttaactttc
     1621 acaccagaag attttacatc agcaaaagat caaaatgtaa atattcttac ttttatagca
     1681 aataaatttc ccgaagtttc tttattagct tatgttggac ctattgttgc acttgtggct
     1741 attagtaaaa gttttttagg tcattatctt ggctctcaag aaggcttaaa tggtatttta
     1801 tataaagcaa gtaatggtaa aattcaaggc aaattagctc aaactttaac agcagttatt
     1861 acttttgcta tcgcttggtt ggttgcgtat aaaaatccaa gtgttatagg gattattgaa
     1921 gctattggtg gtcctgtttt ggctatttta cttttcttaa tgccacttta ttgtatttat
     1981 cgttttgata ttttggcaaa atttcgtaat aaatttttag atctttttat tttggtaatg
     2041 gggatagttg caatttctgc tgcaattcat aatcttttat aaattaagga taaaaaatga
     2101 gcaatttaag catttttaaa ataggtgttg gtccttcgtc ttctcatact ttagggccta
     2161 tgcttgctgg aaatttattt tgtaaaaaag ttgctaaaaa gcttgatgaa atcaataggg
     2221 ttgaagttac tctttatggt tctttgtcgt taacgggcaa ggggcacttg agcgataagg
     2281 ctgtaatttg ggggttaaat ggtttagagg ctaaaaactt aagtgcagca atacaagatg
     2341 aagtgaataa aaatgctatt gaaaatgctc aaattgattt ttgcggtgag aaaaaactta
     2401 gttttaatta tgaaaaagat ttgatatttt ccaaagattt cttaccttta catgagaatg
     2461 gtatgaaaat taaagcttat gattgcaaag gtgcattagt tgatgaagaa acttattatt
     2521 ctgtaggcgg tggctttgtt ttaacagctg cggaattaga aaaagaaggt aaaaattcta
     2581 atcaaaacaa aaagaaaaaa ctagacatag agcttaataa tgcaaaagaa gctttagaac
     2641 tttgtgataa aagagattgg gatttagcag agctttctta tcgttatgaa ttgcaatttc
     2701 atactaaaga agaaattcgt gcttattgtc ttgaaatttg ggaagtgatg caagaagtgt
     2761 attataatgg tacacatcca aatgaagatt atttacctgg aaagcttcat ttaaagcgca
     2821 gagccaaagg gcttaagaaa agagtagcaa tgacggctga tcctatgggt attatcgatt
     2881 ttatttcttt atacgctatt gcgattgctg aagaaaatgc tagtggagca aaagttgtaa
     2941 ccgcaccaac aaatggagca tgtgctgtta tccctgctgt tatgctttat cttaaaaatc
     3001 atactatagg ttttagtgat gaaaaggcta tagagttttt attaacagca atgcttatag
     3061 gttcttttta taagaaaaat gcaagtatta gcggagcaga agcaggttgt caagcagaaa
     3121 ttggcagtgc tagctctatg gcagctgcag ctatggcaac ggttttagga gctaatgctt
     3181 ttaaagcgtg taatgctgct gaaatggcaa tggagcatca tctaggctta acttgtgatc
     3241 cagttgctgg acttgtgcaa attccttgca tagaaagaaa tgcctttgga gctattaagg
     3301 ctataagtgc tgctagaatg acaatgacgc gtaaatctac tcctatggta agccttgatg
     3361 aggttataga aaccatgtat gaaacaggaa aagatatgaa ttataaatat aaagaaactt
     3421 ctttaggcgg tcttgctaca aatttaaaaa cagtatgcta aagtgttttt acactttggt
     3481 atattttttc attctttgac ttaaaaattc tttcatttct tctttagaaa agcttttaag
     3541 aatacggatt tgctttaaaa gcaagccaag attaattatc cccatcacta aaagtaataa
     3601 gcaaatcatt aaaaacataa gatctatagc tccaaattca ttaattgcag ctaaacttgc
     3661 aaaaaatata ctcgctaata ataaaaaaaa taaaagcaat atttgtttta atttcgcttc
     3721 attaaaatta tcacaatttt gagtaaaatt tctaaaaagt atgatttttt tacccaaatt
     3781 tgaaattaaa atttcatcat tttctttaaa taagcattct tttaaacttt gataaaaaaa
     3841 gatttcatta tttaaattta agtcatcttt gtagcttgct aaggtgtaat ccttgtaaaa
     3901 aaaggatttt aattcatttt tcttttctat tttaaataat cttaaatcat ttcttgcata
     3961 aaaaaatcca ctaaagttcg taaatgccat aagtatcact ccctaaaaaa ttcctataaa
     4021 gtggcttgaa atttaaaggt attgtaacat tttttttatc atttaaactt gaactttgga
     4081 aaatcaaaaa catatccatt tcatctttaa aaattttgag aaaattttct ccaccctcat
     4141 acattaaaaa tttagtttca cttggaattt gagtgtaaat ttggcgattt gggactttaa
     4201 acaaagggat atttttatca aaattttcta aattttgacg gcttaaaata caaagatcag
     4261 gtacttttgc tttgcaaagt ctagcatcta gtatagggcg atcttttctt atggtttctc
     4321 cacctactac aagcaagtca atcaccgctc taattttgtg tgcataagta cgacttagtt
     4381 cattgcttac aatttttcca aaaggtgagc cattcataga aagagctaat ttaaaaagtt
     4441 taaattgttc tttttgccat tttaaaaaag gttttaaaag tttttttcct tcttcttcaa
     4501 gtatgccaaa ttcaacttct atgccttgtt tttttaaaaa atcagctcca ccacttgcaa
     4561 ctttattttc atctttaaca ctgataaaaa cttttttaaa acctagatcg ctaaaaagtt
     4621 ttgcacaagg aggtgtttta ccttgatgag aacaaggttc aagcgtaaca aaggctatgc
     4681 tatctttaaa aatacctcta tggtttttgc aaataaattt atgcatcgca tttgcttctt
     4741 taggtaatga aatttcagga tttaaatttt taaaagcatg agctatagtg tttaattcag
     4801 catgagcaaa tccagctttt tcatgagctt ttatagctaa aatttttcca tttttatcta
     4861 agattacaca gcctacagca gggtttggat aggttaaaaa ttgatatttc caagcctcat
     4921 ttaaggctaa attcatataa aattccttca tttgtttccc ttatatttta aaattttata
     4981 ttatttgttg caagatagta aattttaacc tttctactta catttcttat ttttctaatc
     5041 atatcagcca tggttttttc atatagcttt agtttcagtg ttatttcgct tgcttgatta
     5101 ggatttaaca aaagtaaaaa aataaaaaga ctgaagtatt ttttcatttg tagtatcctt
     5161 gataattcta ggaatgatta agtttaataa actagaaagt ttttggtggc cgggagaaag
     5221 ggattcgaac ccctggaggt gtgaccctca acggttttca agaccgccgc tttcgaccac
     5281 tcagccatct cccgataagg taaattttgc cttttggagg cgacatccgg attcgaaccg
     5341 gagatcaagg ctttgcaggc ccatgcctta ccgcttggct atgtcgccct gataatgttg
     5401 aaaaagtggt gcccgaggcc ggacttgaac cggcacggaa gaaaaattcc gagggatttt
     5461 aagtcccttg tgtctaccaa ttccaccacc cgggcaggtg attatggagc gggaaacgag
     5521 attcgaactc gcgaccccaa ccttggcaag gttgtgctct acccctgagc tattcccgca
     5581 taaattttgt aaagaattga agataaaagt atagcaaaat aaacttaaaa ggagtttatt
     5641 ttgctttaag ctatttgcaa ataaataaag cttttgcgct taaaatttgt tctttttcat
     5701 tgataattgg agatgaaagt tctatattat cagattttgc atttaatatc ctaggtgtga
     5761 tattggcatt tgtatttact tgtaaatttt tcaatataca agttttgtta agatctaaag
     5821 agtaggtttt ttcatattcg tatgatgttt ttaaaagctc tttatagaga ttttctttat
     5881 tgttgtttag agtatctttt gaaaattttg tttgtatggc tggtgttgag acatcaatga
     5941 aattattttt agctatgatg gaattgatat catttaaaag cttgttaaaa tctgcaagtt
     6001 gattttcttt aaattcgcat tctaaatttg catcaaatct ttgacctttt ggagtttgta
     6061 taccatcttt gtaggaaaaa ttaggttcta aagaaaaact tcccccgcta caaaaatttt
     6121 ccttcctaga tcgttctaaa atttgattga aagtatttgc gatttcagcc ttttctccat
     6181 tatctaatgt gatttttgaa attaaatttt cttttcccca aaaattgata tttgtatata
     6241 aaatatcggg ttttagtgtg ttgcttactt ctatatttct tgaaaaatat aaatcatggt
     6301 tagagtcttt tttacccaaa aattccacat taaaaactac gcctgcaaca aaaagtaata
     6361 aacataaaaa acctataccc aaacctttaa aaaaagctaa cattaatacg tccttaataa
     6421 tttaatttga tctaatttta gcaaaaaatt ttaaaatttt ttgctatact ctaatttatg
     6481 caaaaaaaag agcttgaaaa actgcaagaa aatttacttc tttggtatga aaaaaatgga
     6541 cgcaaaactt tgccttggcg taatttgcaa agtcaaaatt gcgatgagag tttaaagcat
     6601 attgatagag cttatggggt ttatatcagc gaaattatgc tccagcaaac tcaagtcaaa
     6661 tctgttttag aaaggtttta ttttccattt ttgaaaaaat ttcctacttt acaaagctta
     6721 gctaatgcta atgaagatga gcttttaaag gcttggcaag gacttggtta ctatactcgt
     6781 gctagaaatt taaaaaaggc agccttagaa tgtgtggata aatttggagc taatttaccc
     6841 aaagaacttc atgatttaaa aaaattaagt ggtataggag cttatacagc aggagctata
     6901 gcttgttttg gttatgatca aaaagtttct tttgttgatg gtaatatacg ccgtgtgctt
     6961 tctcgtcttt ttgctttgga aaatccaagt atgaaagaac ttgaaaaaag agctaaagag
     7021 cttttaaatt taaatcatgc ttttgatcac aatcaagctt tgcttgatat aggagctttg
     7081 ctttgtgtga gtaaaaatgc aaaatgcggc atttgtcctt tgtatgattt ttgtcaaggg
     7141 aaatttaata cagaacttta tccaaaagct aaaaaaatac tttatgaaag cgtgaattta
     7201 aatctttttt tgtttgaatt taataaaaaa tttgccatac aacaaagtca agataagctt
     7261 tataagggta tgtataattt tcctttttct aaagaaggtg agtataagct ttctaaagat
     7321 atgagattta taggcgagtt taaacacagt tataccaagt ataaactcaa tatcaaggtt
     7381 tatcatcaaa ttttaaacaa tgaaagtaaa aattaccaat ttaaaacttt aaaagaatta
     7441 gaaagtactg cactttcaat actttcttta aaggctttaa aattaattaa gttctgattt
     7501 tttaggcaga cataaagtag ctataagtat gatggttgta aaaatagcta tataaacaaa
     7561 aaagccattt tctatacccg cgttttaaat tgtaaagcaa cccaaggagc agatcctcca
     7621 aaaacagcat ttgaaatggc ataacccaaa cctgttccta aagctcttac atgttcaggg
     7681 aaaagtttgg ctttaaaagc taccgaagta taaaaactta agatgataaa taataatacc
     7741 actaaaataa atatcaaaaa gaattatttt gtgcgttatt ggctataagt gtaaaaatag
     7801 gataaattcc taccaatgtc aaaatacaaa atataattaa agatcgtttg tgtcctattt
     7861 atctcctata tatccaaaaa gaggttgaat gatcattagt ataaataaag cacctaaaaa
     7921 agattattaa caagcatttt atccatacct gtattttcca tgaaagtttt agtataagtt
     7981 gtaatagtat aaaaagctaa agaaacctcc agaagtaact ccaagtacca ttaaaaaagg
     8041 tttccaagat ttgcatagcg cctttaaagt gccacgatct tcatgttggt aaagttttgt
     8101 agcactttca ttcatcattt ttcttacaaa aagtgagcct agtgctaaaa ttccacctat
     8161 tacaaagagt attctccaag cataatcttt catatcatca atgctaaaaa ataaaaacat
     8221 tatactaatg cttgcaacgg ccaaaagttg accacctatt agggttacat actgaaaaga
     8281 tgagtaaaaa ccgcgctttc cttctgtagc aagttctgaa agataagtag ctgctatgcc
     8341 atactctcca cctacgctaa gaccttgaat gagtcttgct attaaagtag gataatagca
     8401 agatcgccaa ctgtatcttt gcttggaaaa gctgctatca taaaagagcc caaagccatt
     8461 aaaaccactg atataaccat agatttctta cgacctactt tatcagctaa agatccaaga
     8521 gcctatagga cacatgaaaa atcctgcagc aaaaattcca aaggcattga tttgctggat
     8581 aacaggatta tctgaagttg aaaaagtatg agcaaaataa gttgctgtaa aagcatagat
     8641 ataaaagtca aaccactcta ctaaatttcc actacttgcg gcaatgatag atcgaatttt
     8701 tttcgcacga gtaagatctt gcataaaccc ttccttgatt ttagattttt atttaagtat
     8761 agtgtgattt ttgtttaata tatttaaaaa taaagaagag aaataaaaat gataaaaatg
     8821 tttataaaca atgttgcata ttttagtaaa tttcataaat tttgataaaa tgtttgctct
     8881 aggatgcata atgaaattta aaaaaatata tatagaatta agcgatattt gcggtttaaa
     8941 atgtgatttt tgtccttctc aaaaggctgt tcgtggggta atgagcgaag acaaatttca
     9001 aaatttagcc tatgaaattt ctactaaagc cgaatttttc actttccatc ttttgggtga
     9061 tcctttactt ttgcctaatt tagagaatta tctaaaaatc gcaaaagatc aagctatgaa
     9121 gcttgaaatc actacaagtg gtttttattt gggttctaaa aaccaagctt tattgctaaa
     9181 atatgataat atccatcaaa tcaatatttc tttaatgtct tttttaagcc aaagcaagat
     9241 ttctttagag cagtatttta agcctatttt agagctttgt aaaaagcatt tagaacaaca
     9301 aagctcttct ttcatcaatc taagactttg gaatttagat cttaatttta aagcacccaa
     9361 gtcaaattta aaaatttatg agtttttagc taaagaattt gaagttgaaa ttgatacaag
     9421 tttaagtaaa aatcgcctgc aaaggcatat tttacttcat caaaataaag tttttaaatg
     9481 gcccaattta aaagatgaac ccctttataa aaaaggaaaa tgccatgctt taaaagagca
     9541 agttgggatt ttaagtgatg gaagtttagt gccttgctgt ttggatacta gagcggatat
     9601 taagttagga aatgtttttg aaaataattt taataagctt cttaaatcac cacgcgtaga
     9661 gatgataaaa aaagcttttg aggaagataa acgcatagaa aaactttgtc aaacttgtga
     9721 attttttaag gcaaggattg agtgattaca aattgttatt ttctagcttt gttttaaatt
     9781 tttgaattct atctattatc ttaggactaa ggcgtaatag tatatatgta tctttgttga
     9841 aataaatgct tcctgttttg gctgctttag tgttttttaa taaagtattt gtgtttaaaa
     9901 gatcattttt ggcattgact ccaagaatga gtatgtccgg attttgttta agtatatatt
     9961 ctgctgatat aacaggtctt gaaatttggc tttgcggact taaattttta attcctatga
    10021 gccttaaaat atcagtcatt aaagaattat cattaaaggc cattaaaggg ttgctagaat
    10081 aaagataaat cgcacttttg tttaaaggtt tatcacttag tttttttaaa ttttgagtga
    10141 attcttgctt taaaagctct gcttgttttt ctttgttggc gatttgacct aagattgtga
    10201 tgttgtttat tatatcttct aaacgctcag cttttaaatt tatacttttg ataccaaaat
    10261 ttttaagccc ttcttctaaa tttaaagaat aagagcttaa aatcaccaaa cttggtttta
    10321 atgctactat tttttcaagt gaagggtttg aaaaagtgcc tacacttgta agttttgaag
    10381 ttttatcttc tggatagata tttgagtgtt gtaaatttgc aatgcctaca atttgatcat
    10441 cggcattaag cataaaaagg gtttctatac ttgcaggatc aagaactaca aggcgttctt
    10501 ttgcatttag tgttattaaa aacaaactta taataattaa aatttttttc attttttctc
    10561 ctttaaagct aaaatataag gtttagaatt tttataaaca atctcgcagt ttaaatcata
    10621 aatttctttt aaaatttctt gggtaaaaag ttctttacta gttccaaaat accttatctc
    10681 accttctttt aaaaaaagga ttttgtcgca aaatatagaa gctaaattta aatcatgcaa
    10741 gatggcaaca acggctatat ttttttcttt aactagtctt tcgcaaaggc ttaaaagctc
    10801 tatggcatag tttaaatcaa gggctgaagt gggttcatct aaaaaaagaa tttttggttt
    10861 tttaagcaaa gctcttgcta aaagcattct ttgaaattca cccccactta aagaaagaat
    10921 acttctttct aaaaaatttt caagttttaa atccttggca aattctttaa cttcaaaaat
    10981 atcttcttta gaataagaac taaaagcgtg ttttaaattc gagtatttgc tcattaaaag
    11041 cacatctatg acttttaatg gggtgtttaa ttctgatttt tgaggcacaa aaccgcaaat
    11101 tttggcaaat tctttaagag aaaaatcttt gatatttgta tcaaaaaggc ttatttcccc
    11161 tttgtttggg tttagatttt taagtataag ttttaaaagg gtgcttttgc ctgagccatt
    11221 tggacctaaa attcctataa aagcttggtt tttaagttct aaatgaatgt ttttgagtaa
    11281 atctttttta tgataagcaa agcttaaatc ttgtattttt agcattacaa aaatctccta
    11341 gcatttagag ctaagtataa aaaaatagga gctccaaaaa atgcagttaa aattccaata
    11401 ggaatttgca caggagctaa aagagtcctt gccaaagtat cgcatataag taaaaacaac
    11461 cctccaagtg ccgtgcataa agggataact aaagcattgt cataattttt aagcaaaagt
    11521 cttatggtat gaggaatgat gagtccaaca aaggctataa gtccgctaaa agcaaccgca
    11581 aaagatacgg ctaaggatga gacaatgagt aaatttatct ttaatttttg agcattaact
    11641 cctaggtttc tagcttcatc atctccgctt aaaagtatgt ttaattcatt tttatgagca
    11701 taaaaataaa ataaacaaaa agtcaaaggc aagattaaaa ttcctacgcg aaaccaagaa
    11761 gcattgccta tatttcccat aagccaagct actattttaa aagaatcctc acctataaga
    11821 taggtgaaaa aagaagtaaa agctcctaaa aaagatgaag cagctatgcc gataatgagc
    11881 aaagtggcta tagaggtttt agaagaaatt ttaaaaacag ctagggcaaa aaaggcagag
    11941 caaacaaaac ctaaaattcc ataataataa tcgctcaatt ttaacaaata cgccaaaacc
    12001 gctccaaagg ttgctgcaga agctatgcct atgatataag gatcagctat aggatttgaa
    12061 aatacatttt gagtaatagc cccgctacta gctaaaagca taccgattaa aatcgccatg
    12121 ataatgcgtg gcaagcgtcc atttatgatt atttgacgca aaatttcatc ttgattaaag
    12181 atatatgaaa aaagttcttt tgggcttaaa ttctcatctc ctaaacaaag tgctgtaaaa
    12241 gaagtgatta tataggctat taaaatccca ataatcacta aatttttaga atgcatattt
    12301 aaattcaaca tagtagtttc taccatttcc aactaggtat tgatcattta tactatcttg
    12361 gtaggtgtag tatcttttat caaaaagatt gcgaattcct gctaaaattt tgtaattttt
    12421 ataatcatat ctcatgccaa tatctgttaa aaaataatcc cttgtccaag aatttttaga
    12481 catttttcct gtattttcat ctatggttcc accatctttt gctctagaaa aataagttaa
    12541 atcaataaaa tttgagaaat ttttattcca agcgtattca agtccagctg tagctttgat
    12601 ttttgaaaca taaggaattc tcatgccatc attaatacct ttagaaattt tagcgtcaag
    12661 ataagttaga ctttctctaa agattaaatc atcatttaaa aaattttgac tcagacttaa
    12721 ttctactcct aaacggcggg tttgatctat gttataatat ttccaccaag aaccgctagt
    12781 agaatgaggg tttccaagat aagaaatttc atctttgctt agggtgtaaa ataaggtcaa
    12841 attaaaacca taaaaatccc accaaaaatc atcaatacct agttcaaagg tatcaaaaat
    12901 ttcagctttt agattggatg aagaataagg tggtaaattt gtaccggttt tattgcgatt
    12961 gacaaattga gcaggtgtag gagagacaaa tcccctttca tatttaagat aaagattgcc
    13021 cgtgtcagaa tacttaaaat ttggggtgat ttccaaagca aaattatgag tgtttttatc
    13081 ggtattaaaa agagtagttg tatctataat agtaggtgat gggggtcttc cgttcatgct
    13141 catttcgttt ctataagatc tgtctgtact ataagtgcta aattcatatc ttgctccacc
    13201 cgataaagtg aaaaaatcat taaaattatg agaatcaaga gcaaagatag aatggctttg
    13261 tttagtcata tccattaaag ttgtcattct atgatagttt ataatacctg gaacgctata
    13321 atataccaag ctttttcttt ttgcatcatg atttgcaaat tcatagccaa aaataaaata
    13381 agaattattt gcgtaattta gtttgttttt taaagctatc cctgtaagcg tatcttcaaa
    13441 gccacttcca ttttgataag ctgtagtccc catcatagaa atttcatctt ttaagtaatt
    13501 gatcttttga ttttgccaaa aagtttctag gttaaattcc cacatatcat tatagtaatg
    13561 ataatctaaa gaaatttcag gacgattgat ttgcgtgata ttgtcattgc ttcctttttg
    13621 agttggatcg ctttgagctt gtgcttttgt tagataacca ctgctagtat ttttgctttt
    13681 aaaataatta taaaccaaag ttaaatcact attatcatta aaatcgatat aggtttttgt
    13741 attgataaaa taaccctttt tattataacc ttcttgatat ccatcatggt taaaactttg
    13801 tatatcaaag ctaaatgcta aattttcatt tatttgttta gcaccattga tacctaaatt
    13861 tccactcaat ctaccatgat cataactact gcttttaaaa tttatagcaa aagcatctga
    13921 tttttgtttt tttgtaatga tattaatcac accacctcta gtaccacttc cataaaggac
    13981 agatccgcca ccaggtatga tttctatgcg ttctatgttg tctaaattta tactttctag
    14041 cggggttaca ccatgagaat tatcaagaac attaatagca cgcccatcga tcataacttt
    14101 tacagctata ttggatttat ttccttgtcc acgcatgtct atattgcgtc caagtccaaa
    14161 atttataaaa ctaatgcctg agattctctc taaggcttgc tccaaagaaa tataaccttt
    14221 attttgtaga tccttgccct ctatgctgat tatattacgt aaatttgaat ccgcatcttg
    14281 ttcaaaacct gttgcactaa cgacaatttt ttgcaactta atagcttcgt ttaattcttg
    14341 tgcatttaaa tgagttgtta ataatgtaaa taaagataaa cttaaaaatt ttttatttgg
    14401 gtgcaaattt tcctccttaa ataaaataaa taatgataat ttatatcata ataatttaga
    14461 atgaaattta tcttttatta acttaattta ctattaattt ttgttaaaat agataattta
    14521 tatattttaa gtacttttta atttgataat tgataccatt tttttaatat tttattttaa
    14581 aattttaaga aaggataaac aatgaatttt gaaagcatta tttctcatat gaatgatcat
    14641 cataaatcaa atttagttga tctttgtaaa aagtttggtg gtattgaaca agtgcaagat
    14701 gtttttttaa aaagtgttga ttttaacggc ttagatcttg tttataataa caaagaaaat
    14761 ttacgagtag aatttcctaa aaaagctgat gaaaacacga ttaaagatac tataatatct
    14821 ctttgtatga gtgcaaagac tgaacaaaat tttaatggcg tggaaaaaga attaaatgaa
    14881 tttatgctaa gttttaattc tgtatctttg gcgactttaa atgcaaatgg agaagttgtt
    14941 tgctcatatg caccttttgt aagcacacaa tggggaaatt atatttatat aagcgaagta
    15001 agcgagcatt ttaataatat caaagcaaat ccaagtaata tagaaataat gtttttagaa
    15061 gatgagagta aagctgcttc tgtcatactt cgtaaaagat tacgctatag agtgaatgca
    15121 agttttttag agcgaggtga aagatttgat caaatttatg atgagtttga aaaacaaaca
    15181 ggaggagaag gaggcattaa aactatacgc aaaatgcttg attttcatct agtaaaactt
    15241 gaatttaaaa aaggacgttt tgtaaaaggt tttggtcaag cttatgatat agaaaatgga
    15301 aatgtcgcac atgtaggtgc tagtggaaat ccgcataaat tcccacataa gcattaattt
    15361 tgtataaaaa tcttataaat tttgttcttg taaagtttgg gcttgatgat gagtgattaa
    15421 aggttctata atttcatcaa aaagtccatc ttgcataatg gcatctaagc ggtataaagt
    15481 aagatttatt ctatgatcac tgatacgatt ttgtggaaaa ttataagtgc gaatgcgttc
    15541 gcttctatct ccgcttccta cttgagattt tcttgcttca ctttctttcg ccagtctttc
    15601 actttcttgc atttcataaa gccttgcttt taagactttc atagcacttt ctttgttttt
    15661 atgttgactt tttccatctt gattgactac gactatacct gtagggatat gagtgatacg
    15721 aacagccgaa tcagtggtat ttacactttg cccaccatgt cctgaagatc gcataacatc
    15781 aactttaaga tcgtttggat tgatttcaat ttctatatca tcaacttctg gcataactgc
    15841 aactgtaatg gctgaagtgt gtacacgacc ttgagattcc gtttgtggaa cacgctgaac
    15901 acggtgcgtt ccgccttcat atttaagtct tgagtaagct cctgttcctt taacaagcat
    15961 gataatttct ttaaaaccac ccatacttcc ttcgctagaa ctcacaatct caagtttata
    16021 accacgattt tcagcatatc ttgcataggc ttttacaaga tctcctacaa ataaagacgc
    16081 ttcatctcca cctgtacctg cacgaatttc aagaaaaata tttttttcat cgttaggatc
    16141 tttaggaagt agtaaaattt taatctcttc ttcaagtttt ggctttagtt cttctaaagt
    16201 ttttagttct tcttttgcaa gttctccaag ttctggatca tttagtaagg ctttattttc
    16261 ttctatattt tctaaagttt ttaaatactc tttagctttt aaaacgatag gttctaaatt
    16321 tttttgttct ttagagagtg tagtcatttt gctgatatcg ctgagtatat cagaattgct
    16381 aagaagagaa tttaactctt caaagcgttt taaaaaagga tctagtttgc tagctaacat
    16441 taaaaactat atagaaaatt atgcaatttt atttactaaa agagctaaac ggcttacacg
    16501 gcgagaagca gtttgttttt taataaaacc acgacttacc atagcatgaa tgcttttatt
    16561 agctactttt agagcttcat ttgctgcatt tttatctcca tttgctgcag cttctcttat
    16621 agctttagtt atatttttaa gtcttgttct atagaatcta tttctttctg tttttttaat
    16681 agtttgtctt gctctttttt cagcagattt atgatttgcc atttatattt tccttttttg
    16741 aaattaaaga ctaaattata taagaataaa atttaaaact taattaattt aagcaaaatt
    16801 tcaaaataaa tctttcaaat ttatatccca agaaactaag ttaaatttaa gtaaaaatcc
    16861 gtaaattaca gcgcttaaaa gtccagcaaa taatcctgct agcatatcat caagcattac
    16921 acctaatcca cctttaactt ttttatctac cttaccgata atagaaggct ttgtaatgtc
    16981 aaagagtcta aataaaataa aagccaaaat aaaattgatt atcgagtttt cgacacttgc
    17041 tgcaatagca caagcaataa aaaccccagc aacttcatcg atgactatat gtttatcatc
    17101 gtgaattcct gtttttttct cataatcatc tataacacga atgctcgcaa caaaaattaa
    17161 aatactaagt aaaaacaaag tatttattcc aagatattta agtataaaaa aagcagggat
    17221 taaagcagaa atggtgccaa aagttccact tgcttttttt atacaacctg aataaaaaaa
    17281 agttaaaaat agtttttgca tcttgttaca ccatataaga catttgatga atttctaaaa
    17341 gtttttgata aaattcttca tcatttttgt attctaaaat tccatcagtt ggaaaaagtt
    17401 cgttataaat tttttgcata ttttttaacc tatttggaaa aagagaagtt aaaataacac
    17461 tagatacttc tttgcgcata aaaattgctg gaggaataat acctgctctt agtaaatctt
    17521 ttaaagattg agagttgtaa tgtaaatgat gatgacaacc atggggacaa gatcttgtac
    17581 taacgatcat acgacattga tcacaaaata caaattcagg caatacaatt acttctatac
    17641 cataatcttt ggaaaaatca tcaagtatgg ttttgggttg attatcatca taaaacattc
    17701 caagtcctgt atgattttgt cctactacaa gtttagtgca acctaggttt tttgcgataa
    17761 tgctttctaa gccagggttt aaatgagcat gaaagatatt gatatttttt aatggaaaaa
    17821 tgaaaattct atctggtgga agataatttt gaataaattt tttcaaataa gcttctttaa
    17881 gttcaaattc aaacccattt gtatcaaaag attctacaag aaaaattaca actaaatctg
    17941 ctttatcgat agtccaatga aagattcttt catgggcgcg atgcaaagga tcaagacttg
    18001 aaactatagc agtaactttt cgagcattaa gattgttttt agtttgttga aaattttctt
    18061 ttatcttttt aatttgggaa ttataaattt ctatttttcc acttatgcaa gttgttccca
    18121 tgtcttctaa agagcaagtg ttagtgctga aaatatcaga aaaattttta ttatttttaa
    18181 atttactttt aaaatctata tgtcctacta cttttttatc taacatgagt tcaattttat
    18241 taccagattt aatattatct agtgcttctt cggcattttt gggtgcgaaa cttaaaggat
    18301 agggaaaact ttctcctttg aattttcctg atttaatgat ttcattaact tctttttcat
    18361 tcattaaatg agtgcaactg cctaataaac cttctttgat aagtgataag actccaaatt
    18421 cattttgatc tatgataatg tttttatttt ttcttactga tttcatattt tttccttttt
    18481 tcccataaag acttacgtga aatgcctaat ttttttgaaa gatcagtatc aggaaatata
    18541 ttttggtaat ttataataac gtattttaca tactcatcta tagttaaaat ttcattgcta
    18601 tcgatatttt tttcattatc atttaaattg atacagttta tttttaaatc atctgtgctt
    18661 gaattggtat gtaaaataac agttttattt tgtataaaat ctagaagttt ttctttttct
    18721 gttgctttta atgcttgaaa attacttaaa aataaaagat tattttctgt aggaaacttc
    18781 atgacttttt caactgaatt tgtagatgtt aaatcaataa aagaaagagt aatatcacat
    18841 tcatttgcat aattaaaaac aaaagcatca gcactgcttt gcttgttgga ttttaatatc
    18901 agtggaagtt ttaatttttt atagttatat tctggaattt taattgtctc taatcttgat
    18961 ttgatataac tttgataggc tttattaagg attgaaagtt ttctaaaatc ttgataatgt
    19021 ttaatttttc taatcagctc ttctatcata aaaggttttt gaatataatc actagaacct
    19081 aatttcaaag gaattaaaac tgtatctgtg cttatataag aaataagcaa aataataata
    19141 ctatgtttaa attgccctac ggcttttaaa aaattattag tatttgtaga aagtagtaca
    19201 atatcgtagt atttttcacc attgtattta tcaaatgagc taataatttc acaactatat
    19261 ccagcatcac ttagtttaat actaatactt tgtgctagat aaatttcatt ttcaataatt
    19321 aaaactttca taatcttgtc caatcaaaat attttaaatt tacgctgcta agcactgcca
    19381 taccttcttt tctaccaata aaacctaatt tctctgttgt tgtagcttta acattgattc
    19441 taaattcgtc taaatttaaa gtatgagcta tattgctttg catagcttgt ttaaagtctt
    19501 taagcttagg gctttgtgcc atgacacaaa tgtctatatt aatgagttca aaacctactt
    19561 ctttgacttt attataagct tgttttaaaa gctccatgga attggcattt ttaaatttca
    19621 tatctgtatc aggataaagt tctcctatat ctccaagtcc tgcagcacct aaaatcgcat
    19681 cggttaaaga gtgagctaaa acatctccat cactatgtgc tttaagcccc atagtaggat
    19741 gaatttgcac tcctgctaaa agcaaaggac gattctctcc aaattcatgc acatcaaaac
    19801 cattgccagt aaaaatttca aagctgggct taggtaaatt aagtttttta agatcctctt
    19861 taaaggttaa ttttcttgca ttttcttcac cttcaacaaa ccaaattttt ccgcccattg
    19921 cagctatagc tgtgctatca tctgtaaatt ctaaattttg atccaaagct tttttaagca
    19981 gtttggtttt ggaaatttgt ggggtttgaa taagtttgat tttttctctt tgcaaggctt
    20041 cattgtcaaa aagtgttgta tctgaaactt ttaaggcagg agtaatacaa tctgccttat
    20101 ctaaattttc aatcaaacga tcaaataaat ttttacttat caatactctt gccacatcac
    20161 ttaccataac aaattcacta tctatgagct ctaaggcttt tcttaaagat tctgctctgg
    20221 tatcaccacc ttctatgaat tcatagcttt tagtaaattt tttcatataa gcagtattac
    20281 tagaggtaac aactatcttt ttaaaaggat aaaaagagct taaatttttt gttgcataaa
    20341 gccaaagagg atcattttca agtcgtaaaa attgtttttt tacctttgca ttaaaacgag
    20401 tagaatttcc ggctgctaac ataatgagac taatttcact cactttttca ttcctctttt
    20461 aatattgtta atttttaata atgttaccat attatacact tataaaaagc taaattttat
    20521 tattttatta gtaaaattga tttttttaaa acaaggaaaa gacatgaaag aacaaatttt
    20581 agagaaatta aaaactgtaa aatatcctgg ttttgaaaag gatatagtaa gttttaattt
    20641 tgtaaaagat attaaaattc aagataatgg tgtattgatt gatatagaaa ttgtttcagc
    20701 aaatcctgaa gtagccaatg aaattcgtaa aaatgttaat gaagctttat caagtctagc
    20761 tttaaaaaat atagaattaa atatcatcgt tccgaaaatt cctgaagaaa aaagcaattc
    20821 aagaagtgga aaaaatatcg ctccgcaagt gaaaaatttc atcatggttt caagtggaaa
    20881 aggtggcgtg ggtaaatcca caaccacggt aaatttagca atttctatgg ctaaaatggg
    20941 aaaaagagta ggaattttag atgcggatat ttatgggcca aatattccaa gaatgctagg
    21001 tgaaactaaa actcagcctg aagtagtagg acagaggtta aaacctattt taagtcacgg
    21061 tgtttatatg atgagtatgg gtgttttgat cgaagaagga caagggctta tgtggcgtgg
    21121 agctatgatt atgaaagcga tcgaacaact tttagctgat gtgatttggc ctgaacttga
    21181 tgtgttgttt ttggatatgc ccccaggaac aggtgatgcg caaattactt ctgcgcaaag
    21241 cattcctatc actgcaggag tttgtgtgag tacacctcaa actgtatctt tagatgatag
    21301 caaaagagct ttagatatgt ttaataagct tcatatccct atagcaggtg tgattgaaaa
    21361 tatgagcgga tttttatgcc ctgataatgg taaagaatac gatattttcg gaaaaggtac
    21421 ggctttggct atggccgagg cttataagag tgaagtttta gcacaaattc ctatagaaat
    21481 gatagttaga gaaggagcag atgaaggtaa gcctgtgagt ttttaccacc ctgagagcgt
    21541 aagttcaaag cgttatttaa tggcggctga aaaaatttgg aattttatag aaaagattaa
    21601 taatgaaggc ggtgtggata attctgctat ccaacctgtg atgaatggaa aaagtgcatg
    21661 ttcgcattga aaattaagcg tataaggaaa agaaaatgat taacactaaa gaagattttt
    21721 tacttttaat caaacaaatc gaacaaaaaa gcggttataa aaaacctaaa gcttttggta
    21781 tagcaaggct tgatagagga cagcttaata aaaataaaat tttgcaagca agttttgctt
    21841 tgattaatta cgaacaaaat tttggttcag cagcgatcat gcttgaagct tttatgcaaa
    21901 ggggcataga gattgatttt aatgcaagtg aatttgtaca aactttgaaa ttagaagata
    21961 tcgattttgc actttcgtgt tttaagcctt ttttggaaga agaagggcat caaaatatcg
    22021 atctattaaa gatagtcaaa gacaaattta aagatgatga atttgctttt gtttgtcttt
    22081 ttgaagataa agagcctttg agtgtggaga gtgtttatct aaaactttat ttactatcta
    22141 ctaaaaaagt gcctttaaga agcatcaatt taaatggtgc ttttggaatt ttaagcaatg
    22201 tggcttggag cgatgataaa cctattgagc ttgagtattt aagagtgaat gaaatgcgtt
    22261 taaaaatgag taatcaatat ccaaaaattg attttgtaga taaatttcca agatttttag
    22321 ctcatattat tcctgaggat aatacaagaa ttttagaaag ttctaaagta agaatgggtg
    22381 catttttagc agcaggaaca accatcatgc caggagcaag ctatgtaaat tttaatgcag
    22441 gtacaacagg agcttgtatg gttgaagggc gtattagttc aagtgctata gtaggagaag
    22501 gttctgatgt aggcggcgga gcttcaattt taggtgtgtt aagtggaaca agtggcaatg
    22561 ctataagtgt aggtaaagct tgtcttttag gcgcaaattc agttacaggc attcctttag
    22621 gggataattg catagttgat gcagggattg cagtgttaga aggaacgaag tttttgctta
    22681 gagatggcga agaacttgcc aagcttaatc caaattttga ttttagtaaa gaaatttata
    22741 aaggtttgga gcttaaaggt ttaaatggac ttcatttccg tcaagattcc attagtggcg
    22801 ccatgatagt ggctttaaac aaaaaagcag taaaactcaa cgaatcttta cattaataca
    22861 aaatttatta acataaagct ttaagcttta tgtctttctt ttaacttaga aatcacatct
    22921 gaaaaattaa ggtttgcatc tgcaagtaaa acgcttaaat gatacattaa atccgccgct
    22981 tcgcaaataa gctcttcttt atcttttatc gttgctgcta aagcggtttc cacgccttct
    23041 tcgccgacct tttgtgcaat gcgtttagtg ccacttttaa aaagttttgc tgtataagaa
    23101 gtattttcat cagcattttt gcgtgaattg ataagttttt caagtctagc tagaaaaaca
    23161 aaatccgcat tcttagaaat tttttcaaag caagaaatat cgcctgtatg acaagttggt
    23221 cctatggggt ttgccaaaat taaaagcgtg tcattatcac aatctaagct taaatccacg
    23281 atatttaaga aatttccact ttcttcaccc ttcatccaaa gacgctgttt tgtgcgtgaa
    23341 aaaaagacta ctttaccact ttctaagctt ttttctaagg cttcattatt cataaagcct
    23401 agcattaaaa cttcgcaagt ttttgcatct tgaatgatga caggtaaaag attatccact
    23461 ttttgccaag tgattttttc attaagttct ttgaaatttt gcattttata tccttatact
    23521 taagccttga tttttgagat aaatttttaa ttctttaata tctatgagtt tttgatgaaa
    23581 aacggaagcg gctaaagccc catctacacc tagtttaaaa gcttctaaaa aatgctccat
    23641 ttttcctgct cccccacttg cgatcaaagg cactttacaa atttcatata cagcttgtaa
    23701 ttgttctaaa tcatatccac ttttaacgcc atcttgattc atcatattta aaacaatctc
    23761 gcctgcacct agatcttgta cttcttttac ccattctaaa gtgctttttc cactatgctt
    23821 gcttgttttt tcatcgcctg tgtattgaaa tacttttaaa tttccatgtt catctttaaa
    23881 actatcaatc cctactacca cacattgcac gccaaagctt ttagcaaagc gtgtgattaa
    23941 gcttggatca tttaaagcag gggaattgat agaaatttta tccgctccat tggctaaaag
    24001 ttcagccgca tcttcttcac ttttaatacc ccctgcaaca caaaaaggga tattgatatt
    24061 ttttgctact tcgctcaccc attctcttga tatgcgttct tttctagcgc ttgcagcaat
    24121 atcgtaaaaa acaagctcat caatgccatt ttcagaataa tacctagcaa gttctataat
    24181 atctcccata tctttatggt ttttaaattg tgttcctttt attactctgc catctttgac
    24241 atctaaacat gcaattatgc gttttgtaag catttatttc tccaaaatac atttttcttt
    24301 aagatatttt tccatttctt catcactttt aatttcatca aaattagctt gaatttttgc
    24361 ttctttaccc actttaattt gtttgtttat attatcaata aattctttaa aatttggatt
    24421 tttattaatt agcatattta gggtttgaat atcaagttct ttttctttcg cactaagaat
    24481 gatttttgaa tttaaaagat cattgctttc aagtttgatc acccctatgc caaaactttg
    24541 atttaagcgt cttaactcgc ttaaaacttc actatcgatt ttttttaaaa caaccaaata
    24601 gccttcattt gcccagctaa aattacttac agcttgaaaa tagcattctt ttaaatttga
    24661 aaaatttaaa gcaattttaa gttcaaaaga aaaaagttta tagctatttt gtttgatatt
    24721 ttctaaaagt gttatggttt ctttttcata gtcatcataa ggaaaataaa cccctacaat
    24781 atcaggataa ttccatttat cttccccgcc tttacccttt ttgctttgtt catggtaaat
    24841 tgttttgcaa tttaaattaa aatctaaatt ttcatataaa aattttacaa gtagagggtg
    24901 taaatctctt tcatgaaatt tgtttttttc ttgtttttcg ttggtaattt catttttatt
    24961 gtcaagcttt aaaacttcat tttccttttc tttcaaccaa aatgttctag gtttttgaga
    25021 aactttgata aataaagaat tgtgttgtaa ttcttttata tctacatata tcctagctcc
    25081 taaagtagca attggagttt gtcctatgct agaaagtttt ttatctaagc ctttatcaag
    25141 agctttttgc caaatttcat tgacacttaa aggtttatca ctttgtttta aaatttctaa
    25201 agcaagttct ttgtaactta atttgttaga catcttatcc cttcttctac gctaaaaact
    25261 ccatcaagta aagcttttcc tacgataact ccgctacaaa ttccttttaa gtttttaagg
    25321 tcttctaaac tcgctactcc gccactggct tgaatacaaa tatgaggaaa aatttcatga
    25381 ataagtttat aaagccttac atttactcct tgcatggtgc catcttttga aatatcggtg
    25441 caaagtatat gttttaagcc tttattgcta taaaagtcta aaacttccat aagcttttta
    25501 tcgcttgctt cttgccaagc atttacagcc acaacataat cttcttttaa aatcgtatct
    25561 aaagccaaaa ctatagcttc attaccaaat tcttttaaaa tttcaagaca taaagcagca
    25621 ttcttaatcg ccatagatcc tatgaccact cgttttactc cacaatcaag caaagcttta
    25681 atctcttctt tagagcgtat tcctccacct acttgcaaat ttacacttac ttctttagct
    25741 aatttttcta tcaaagcaag ttgtctttta ctagtatctt ttgcacctgt aagatctaca
    25801 agatgaagtt cttttgcacc tgctttttcg tattctttaa atttttctaa aggattgtat
    25861 ctgtatactt ttttttgttt ataatcccct tttacaagac gtactacttc gccatctatg
    25921 agatcaagtg cgggtatgat ttgagtcatc ctatatcctt aataaaattt gaaattaaaa
    25981 tttctccggc ttcgctactt ctttcagggt gaaattgcac cccgtaaaaa ttatccttca
    26041 ttatgctggc gctaaatttt tgtgaatact cgcaatctgc aatagtatat tctccaagtt
    26101 ctacataata actatgtaca aaataaaaat aagccccttc taaaccttta aataaagcat
    26161 gggaactata aatttggttc catcccatat gtggaaaagt aaagcctttt ttgactttaa
    26221 atttttgcgt tgtaaaatct atgagtttta aggtttcttg atttaattct tcagaaaaat
    26281 ttcctaaaat ttgcatacct aaacaaatac caagcaaagg ttttttggta tttttaataa
    26341 aatcaataag attaaattgt tctaaatttt tcatcgcttc ttttgcggta cccactccag
    26401 gtaaaaaaag cttatcggca ctttcaagtt cttttaaatc cctactgata gttgcattaa
    26461 aacctaatct atccagacaa aatttcaaag atgccaaatt cgcacaggct gtatcgatga
    26521 tgatgatttt catattactc cttcaagatt tataaaattt ttatactcat atcttaaaga
    26581 atcgatactt ataaaatttt cattcttaaa aatataaaaa taactccagc cattatgatt
    26641 ttctttgttt aaatattttg ctgccatttt atgtatgctt aaaatttcgt tctcatcgct
    26701 tactttatta ccattaacta aataacaaat ataattttta tttttatcat agaatttttc
    26761 attttcactt aaaaatccag cattcaaaag ctcttctaag cttacttttg ggggttttgt
    26821 ttcgagttcg tttctggtaa tttcattgtc aattatattt atttgtctaa ttcgagattc
    26881 tgctatttta acataaaatt tctcttgctc tatacctata taatatctcc ctaatttttt
    26941 agcaatagct cctgtagttc ctgtgccaaa aaaaggatct aaaattaaat cccctttttt
    27001 tgtacttgat aagattattt tttcaagcaa aatttcaggt ttttgagtag agtgaatttt
    27061 tttaccatct attcctttta atctttcatt ccctatgcag attcctatat tccaaactga
    27121 cttttcttgt ttgttattat ttaaaaattt catagtttta taattaaaag tatattttga
    27181 atttttatgt ttagaacacc aaataagagt ttcatgggaa ttgcaaaatc ttgtcccttt
    27241 aaaatttgga acagggtttg gtttgttcca aataatatca tttagaatcc aaaagcccaa
    27301 atcttgcatt atatatccta gtctaaaaat attttgaaaa gatcctataa cccaaatact
    27361 tgcatcgtct tttaaaattc gtctacattc gctaagccaa attttacaaa aatcatcata
    27421 ggcttttaaa gattcaaatt tatcccaatc atcatttaca ccactaaaaa cttcaccatt
    27481 ggttcttaaa agttcacctt gtgtttgcat aaaataaggt ggatctgcaa aaatcaaatt
    27541 aatgctttta tccggaatgg tttttaaaat ttctaaacaa ttaccttgaa aaataatatc
    27601 tttttgcatt attataaacc ttttaaattt ttacctgttg gaaaaagttc ttttctaagt
    27661 tctacaaatt cttctttgtc ggaaagtagc ttttgtatta atttttgggt aatttttctt
    27721 agtttttaaa agtgcatttt ttatttcttc gcttatatca aaatctggaa catttaaaat
    27781 atccttactt ctttcttgtt tgtttttctt aagatgtgaa ataagttcat tgtaaatatc
    27841 tattctttga aaaagatttt caaacaattc ttttccatag aaaataaaaa tgtcaacttt
    27901 ttcatctgta ttgttgttaa tttgttcttc ataaaatttt ttatttttct ttaaactatc
    27961 atcactaaac cacatacaag caataatgcg ataattcgag aatttttgtt ttaaagcttt
    28021 gattttttta attaaatttg catattgtcc tcgttttttt gtactatcat gatcatctct
    28081 aattttttgt tcaataaggt aaatattatg ttcatcattg aaaacttgat cggcattaag
    28141 tttattattt tcttcatcaa atcctatatt tttatctaat gctttatatc ccatttcaat
    28201 aatatattca cttaaaatct cttctataaa atcaccaaat ttaatttcac aactttgagt
    28261 tatattttgt attagttttg ttttagcatt tgtaatccta aataatccta tatagcgttt
    28321 agggttattt agcactgtaa gtagaatttc ataatttaaa tcttcaccaa aaatttttgt
    28381 atcaagttta tttttaaaat tttgataagt catatcactc ctttagagct ggctaaattt
    28441 tcactttcta ttttcactgc catttttaaa gctttagcaa aggctttaaa aagtccttcg
    28501 gctttatgat gatcattttt gcctttcact tttaaatgta aactcacacc catagtatag
    28561 cttaaagagt aaaaaaagtg ttcgatcatt tccgtgctta aagctcccaa atgagatttt
    28621 ttaaatttgg ctttatatac taaatgggga cgattgcaaa aatccatcgc acaacttgcc
    28681 aaacactcat ccataggcaa aacaaagcca tatcttgcta taccgatttt atcccctaag
    28741 gcttttttaa tacaagctcc aagtgctaag gctacatctt caacactgtg atgttcatca
    28801 atttctagat ctcccttaca agaaatttca agccctatac ctccatgtac ggcgatttgt
    28861 tctaacatat gatcaaaaaa atcaatacct gttttaatct ctattttacc tccatttaaa
    28921 cacactttta cttttatatc tgtttcttta gtagttcttt gatagcttgc acttctaaaa
    28981 gaacttaaaa tttcattttc tatatctttc caagaaagtt ccccatattt taaaccatgt
    29041 acacctaaat ttgaagctaa aaccatatca ctatctctat cacctatgac aaaactttgt
    29101 tctttatcat aaagttcatg cttgatatat tcttctagca tagctgtttt aggttttcta
    29161 caagcacaat tttcattttc aaaatgcgga caaataaaaa tatcttgaaa ttctataccg
    29221 caactttgta aaatatcaag catcttttca tgggctattt caaaattttc ttttggaaaa
    29281 ctttgtgttc caagaccgtc ttgattgctt accattacaa atttaaaacc gaaatttttc
    29341 agttttaaaa gtgcagggat agcatctttt tcaaaacgca gcttttcaag agtgtcaatt
    29401 tgaaaatcac tttttggttc ttctataaga gtgccatctc tatctataaa gaggattttt
    29461 tgattcattt taaactctcc aagcggaaag tcactgcatt tttgtgtgcg tctaaatgct
    29521 cattttgtgc caaaatttca acacttttac ctaaagccaa aaagccttct ttacttagtt
    29581 cttgcacagc cattcttttg ctaaaatctg ctaaacctaa gcttgaatgc gtttttgtca
    29641 gcccataagt aggtaaaaca tgattagttc cacttgcgta atcccccata gactctggag
    29701 aataagctcc taaaaatact gatcctgcgt gttttacacc ttttaaaagt tcgcgtggat
    29761 tttgagtttg tatgattaaa tgttcagggg cataaagatt tgaaatttct aaggcttgat
    29821 ttaagtcttt agctataata atgcgtgaat tagtgatact tttgcttgca agttctttgc
    29881 gaggtaaaag ttctaattgt ttttgcactt catcacttgc ttttttggca aaactttcgc
    29941 tcaaacatac taaaatcact tgagaatccg caccatgttc agcttgtgaa agcaaatcac
    30001 tagctacaaa tttttcatta gctaaatcat cagcgataac caaaacttca ctaggccctg
    30061 cttgcatatc aatagtagcc ccatttatat cactacttac ttggcgtttt gcttcggtta
    30121 caaaggcatt tcctggacca aaaattttat ctacttttaa aacactttgt gtaccataag
    30181 ctaaagctgc tatagctcct gcaccaccca tttgataaat ttcatcaaca tcacaaagct
    30241 tagcacaaaa aagcacagcg tcgttgattt ttgcaggact agctaaaacg attttttcac
    30301 aacctgcaat ttttgcagga atagcaagca ttaaaaccgt tgaaaacaaa ggcgctaaac
    30361 ctcctggtat gtaaagtcct actttttcta tagggcgtgt tagaatttca catttaacac
    30421 cttttgtggt ttcaagagcg atttcatgtg ggatttgagc ttcgtgaaat tttttgatat
    30481 tttcataagc taccaaaata gcttcttgca aatccttagc caaatgcttg cttgcttgag
    30541 tgatttcttc ttgagtgatt ttaatatttg aaattttagc tttatcaaat tttaaagctt
    30601 gttctatcaa agcttgatca cctttttctt gcacttcttt gatgatggaa ctcactatct
    30661 ttgaaatttc atcttttgca cttatagcag ggcgttttaa cgcttctttt ttttgttttt
    30721 catctaaatt atcatatact aaaatttgca tttttactca ctttaacatt ttttctatag
    30781 gtaaaactaa aatcgaactc gcaccttctt cttttaaagc ttccatagtt tcccaaaaaa
    30841 gattttcttt actcaccata tgtaaagcta catttttttc atcatgagcc aaaggtaaaa
    30901 tggttggtct ttcagcccct ggaagtaagg cttgaatttt atcaagtttt tcttttggag
    30961 cgtgaagcat aatgtattta gactctcttg cttgcatcac tcctgcaaca cgcaacatga
    31021 ttttatccac taaagcttgc ttttctttgc ttaaagcatt ttccttttgg attaaacaag
    31081 cgcgagattc ataaatcact ttaacttctt taagattatt tgcttgtaaa gttgccccac
    31141 ttgaaacaag atcacaaatt gcatcagcta aatttgctct aggagctact tcaacagaac
    31201 ctgtaagcat acaattttta taattaatag cattttcttt cataaaacgc tttaaaagtt
    31261 gaggataaga agtagctatc cttaaatctt caaaatcttt caaactttga aatttctttt
    31321 cttgaggcaa ggcaagagaa agacgacaaa aaccaaaatc aagttttttt aaaagtttat
    31381 agcttggatt ttcacctaaa gattggcgtt caagttcatt ttcttctaaa acattttctc
    31441 ctatgatacc caaatccaca accccatcaa atataagacc tggtatatca tcatctctaa
    31501 cacgtaaaat atctataggt aaatttgtag aaaaagcgat taaactttgt tcatggatat
    31561 gcattttaac accgcattct gaaagaagtt ctatggattc ttttgaaagt ctgcctgatt
    31621 tttgtatcgc aatacgtaaa cgagtgtttt cttgcataac atatccttga aattaaaatt
    31681 aaaaacttat attagcataa gtagttgaat ttttagcaag ggttttgaaa aataaataaa
    31741 tttaatttta tttaaaataa tta
//
LOCUS       DAPWAA010000012        31358 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.012, whole genome shotgun sequence.
ACCESSION   DAPWAA010000012 DAPWAA010000000
VERSION     DAPWAA010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 31358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31358
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.012"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(86..538)
                     /locus_tag="RTF91_000513"
     CDS             complement(86..538)
                     /locus_tag="RTF91_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDZ4943431.1"
                     /translation="MFKVYYKMSLCYLSLHSDGKFLTEVDFCHDKKINKSCNLLDLAK
                     YELDLYFAHKLKKFSVPILMQGTDFELKVYKALMKIPYGKMVTYKDIAEKINHPKAFR
                     AVGNANSKNKIPIFIPCHRVIASNGIGGYNGGLEIKRFLLENEGVILK"
     gene            593..3139
                     /locus_tag="RTF91_000514"
     CDS             593..3139
                     /locus_tag="RTF91_000514"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDZ4943432.1"
                     /translation="MSFMQEYNKLVKERAALGIPPLPLSANQTKELCKLLENENNEEL
                     VSLLENRVNPGVDDAALVKCEFLDSILKGKINAPSIDKKRALKMLGTMLGGYNVKVLI
                     DALKDENIAKDAAEVLKNIIFVHDNFHTIAELSKNNPHAKKVLQSWANADWFNKKEKL
                     PQVIKCIVFKVAGETNTDDLSPAGDAFTRSDIPLHANAMLKVRQAGSLEKIKELKKSG
                     REVVYVGDVVGTGSSRKSAINSIQWHLGKEIEGVPNKHSGGIVMGSTIAPIFFNTAQD
                     SGALPIICDVTNLEMGDEFEIHPYEGKIIKNGSIITEFKLSPNTLLDEVRAGGRIPLI
                     IGRGLCAKAREFLGMENENIFTKPEQPKSSSGGYTLAQKMLGRACGIEGVCPGMYIEP
                     MTLTVGSQDTTGPMTRDEIKELASLGFNADFVMQSFCHTAAYPKVSDSNLHKTLPNFM
                     TSRGGVSLKPGDGVIHSWLNRFVLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAVTG
                     SMPLNVPESVLVRFSGELQAGVTLRDLVNAIPYYAIKQGQLTVEKKNKKNIFAGKILE
                     IEGLPNLKVEQAFELSDASAERSAAACSVDLSIESVSEYIKSNISLIEAMIEAGYENK
                     ATLARRAEKMREWLKNPTLLRADKDAKYAYIIDINLNDIKEPILACPNDPDDVATLSE
                     ILADDKRPKNIDEVFVGSCMTNIGHYRALGEILKDKGILKTRLWVVPPTKMDKAQLTN
                     EGYYSIFGAAGARIEVPGCSLCMGNQARVNDGSVVFSTSTRNFDNRMGMGAKVYLGSA
                     ELAAVCAILGKIPNKEEYLQIVSEKLNDGHKGNIYRYLNFNEIENFKLEN"
     gene            3166..4404
                     /locus_tag="RTF91_000515"
     CDS             3166..4404
                     /locus_tag="RTF91_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDZ4943433.1"
                     /translation="MKLLFASFCCFASLIASDTINCDNIKNNKTLLNESSNLDYLNIA
                     SSCKVSLKNQDFTKKLYAISNEIRGGNSSCNGIAYLPKLQQFDFLLLKIAIDPIAYQK
                     TLDTPENLQKKYDILKSYFRYWAYQSIGNFRLYKAFWQEYNNAIEPLEKYFENNFNFD
                     EGSNIYYTSNALNEFLNWAVGETKIYKDISLLVKIVSNKNYSASYIQDFIFSNNPSQD
                     ELTIALQAALLNQRKKDILELLIRFGARIDEGYESAIFYALENYENTNFLIQKGANVN
                     QANTFGKTPLFYAIEFNRLDIVKLLLENGSNVNQKYINNNEKLALSANIGSNAPYFIT
                     FCALGHTSKNVLMHAAAYGNIEILKLLISKGANLNAVDDLGFNALDFALAAGKKENAD
                     YLKSLGLKANESLFYGGSLE"
     gene            4401..5150
                     /locus_tag="RTF91_000516"
     CDS             4401..5150
                     /locus_tag="RTF91_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDZ4943434.1"
                     /translation="MKTAFITGASSGFGRACVKAFVQEGYKVIALARRKERLEELKNT
                     YKDEIYTLCIDVRNQKEIFKAIESLPKEFQEVDVLFNNAGLALGVDEFDKLNLEDINT
                     MVDTNIKGFLYVAKAIIPILRKQKNAYIFNLGSVAGRNPYFGGNVYCGTKAFVRQFSL
                     ALRNDLRGSNIKVTNIAPGLCKTEFSEVRFKGDIQKADAVYENTQFISADDIAKVVMS
                     IISLPSHINVNEIELMPVTQTWNGFYIERDE"
     gene            5147..6886
                     /locus_tag="RTF91_000517"
     CDS             5147..6886
                     /locus_tag="RTF91_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDZ4943435.1"
                     /translation="MNKFLVLLFLPLVAFANSSEAVENANLFGAFTLIPPLVAIALAF
                     ITKDVILSLFAGVLSGTFLLSLSANIFKTEHLAFVNFYNTAVESFSKIISYILSSTSD
                     PVNAGIILQILCIGGLVALVTKMGGAKAVALKFAKRAKSAVSAQINTWFLGLLIFFDD
                     YANLLIVGPIMRPLADKFKISREKFAFIIDSTAAPVAGIAVISTWIGLEVSLIKTAYE
                     HIGINDISAFSIFVETIPYRFYNIFMLFFVVMTALMGREFGSMYKAEVRARTTGQIAP
                     LHKSGTLDTAELEDQFLAPKKGIKIRAFDAIVPIFTLIILAILGFYFNGLSTLEGEEL
                     AKASANPLSFETFRASFGNADSSVVLFQAALFAAIVAIFIGVCRKIFNLKEAVETWIY
                     GWKTMIFTIVLLLFAWSLSSIVKDLGTSLFITSLLADKLPEFILPATIFAFASAISFA
                     IGTSYGTMGILMPLAVPLAHEIAKINGMDANAMHHYMVINISCVLTGAIFGNHCSPIS
                     DNVILSSMSAKCDHMEHVRTQIPYALFICGISLITGYIPVSLGFSVWFVLPLNFILIA
                     FLLRLIGKKIHES"
     gene            6876..7940
                     /gene="trmA"
                     /locus_tag="RTF91_000518"
     CDS             6876..7940
                     /gene="trmA"
                     /locus_tag="RTF91_000518"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HDZ4943436.1"
                     /translation="MNLENFLTLDEKHSFVKTYFKEFYTKDFKLFSSKAKHYRTRVEL
                     SFYHENDTLFYAMFDSKNKKKYIIKHLDFADEKICTFMPKLLEYLRQDDRLKEKLFGV
                     EFLTTKQELSITLLYHKNIEDIKQNLENLSNILHINLIARSKGKKLVFKTENLRQTLN
                     IQDREIFYEFNNDCFIQPNTAINEKMITWVYEILSTQKRIDLLELYCGYGNFTLALAQ
                     LFFKVLATEISKNNINFALKNCKLNNTTNIHFARLSSEELSLAIKKERDFFRLRDIQL
                     DDFNFSHVLVDPPRAGLDKSVIDLVKKYENIIYISCNPITLKENLKELSLTHKIENFA
                     LFDQFVNTPHLECGVFLSKV"
     gene            8046..8455
                     /locus_tag="RTF91_000519"
                     /pseudo
     CDS             8046..8455
                     /locus_tag="RTF91_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344236.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
     gene            8455..9666
                     /locus_tag="RTF91_000520"
     CDS             8455..9666
                     /locus_tag="RTF91_000520"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HDZ4943437.1"
                     /translation="MLELNKIYKAKQQISGFVNKTPFIHSSFLSEICQSVIYLKNENL
                     QITGAYKIRGAYNKIANLNAKQKKHGVIAASAGNHAQGVAISAKKFTIKAVIVMPEST
                     PLLKISATKALGAEVILKGDNFDESYAFATAYAKENNLSFIHPFEDEFVMAGQGTLML
                     EMLDEVNDLDMIIAPVGGGGLISGIASAAKQINPNIKIIGVGAKGAPAMYESFHAKKI
                     KNAKSVRTIADGIAVRDVNPINFNIILECVDDFIQVDDKEIANAVLFLLEKHKIIVEG
                     AGAASVAALLHQKINTQNHKKIGVVLSGGNIDAQMLNIIIEKGLFKSYRKMQIHVTLV
                     DKPGALLHLTDSLKIANANIVKIDYDRFSTKLDYGDAMISITLETKGKEHQEEVRKIL
                     TQKAFNFYESF"
     gene            complement(9663..10385)
                     /gene="truA"
                     /locus_tag="RTF91_000521"
     CDS             complement(9663..10385)
                     /gene="truA"
                     /locus_tag="RTF91_000521"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDZ4943438.1"
                     /translation="MKIKIIFSYDGSAFLGSATQPHKKSVQDVLGEALSHLGIFSPLL
                     MASRTDKGVHASYAVASVECGEYFTNLEYLKKQLNKFSHPFIHIKKIEKVKDDFEVRF
                     DVKSREYRYIFSHASYSPFMASYVHFYPKFDLDKANELLSFFVGKKDLKFFCKSGGDN
                     KTTLREIFLARAYTYKDFSIFRFKANGFLRGQIRLSVASVLKVLEGKMSEKELKEQIE
                     AKKRYNRFLAPPNGLYLSRIHY"
     gene            complement(10385..11410)
                     /locus_tag="RTF91_000522"
     CDS             complement(10385..11410)
                     /locus_tag="RTF91_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDZ4943439.1"
                     /translation="MKLSLRYVLNQFLSTNLSIFFVLFTIVSMVFFIQLAKLTSSIQI
                     SFLDLLKLYGFMLPRILIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKF
                     FLKIASLISALMLVVALVMIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFI
                     EKQDSGKYENIIMYHPKHKADDKEQLIIAKEAHVQRKDDGFAFSLNQGKMYNFDQGQS
                     IFSGEFDTLVVNTQFNTDNLQTKKFYEYWNDLNENPQRAREFVIYATIALFPLASTLF
                     ALCFGLVTYRYEKGYVYLGMFGVIAIYFGLLSSFSQPPILACFGIFSLSLLVSGYCFK
                     KMILSRY"
     gene            complement(11410..12186)
                     /locus_tag="RTF91_000523"
     CDS             complement(11410..12186)
                     /locus_tag="RTF91_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDZ4943440.1"
                     /translation="MIFFIMILGACLGSFCASLASRIVEKKSFFTSRSFCFSCGVKLK
                     YYEIIPIFSYLFLRAKCRTCKCNLPISLLINEIVGMVLLVLVYFLSQNFHDFLFLSLF
                     LFNFFLLSLVDIKLKAVPQILLWSAFLFAFCYAFKESEILYLLIFKEFSGGFLLNAFS
                     FGGFIFLLKSLVFFLMNFQKKDEIFENLGDADIIIMSCIGGILGFEYGFLVLFVASIL
                     TLPFFIFLKIKAIKEQELAMIPFLNIAFVAVLFYKNLGLF"
     gene            complement(12183..12851)
                     /gene="uppS"
                     /locus_tag="RTF91_000524"
     CDS             complement(12183..12851)
                     /gene="uppS"
                     /locus_tag="RTF91_000524"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HDZ4943441.1"
                     /translation="MNELKHLAVVMDGNRRWAKAKGFLAKLGYSQGVKTMQKLMEVCM
                     EENISNLSLFAFSTENWKRPKDEIEFIFELLDRCLDEALEKFEKNNVSLRAIGDLSRL
                     EDKLKEKIILVEEKTKHCNGLCVNLAISYGARDEIIRAAKRVIEKKLELNEENLTQNL
                     DLSLDVDLILRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRER
                     TFGK"
     gene            complement(12855..13472)
                     /locus_tag="RTF91_000525"
     CDS             complement(12855..13472)
                     /locus_tag="RTF91_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943442.1"
                     /translation="MNMINSTLPIQMKVLAKSGYGHYTLLLNHKKIQTKSMIELEIGA
                     EYLAELYMQNGGVIQFKHLSKCPNFKPFGEGLALIIALLEDKISYKNFIIQNLLECKD
                     IERYQILKEMLFASFENIYHIPFIFENKSCLFQMRKRAKYLEIYLYFSVFGALKILID
                     SQGVSVFTPFAKVQKFLNEHLDFNVLQESKVEPLFVFKRLFDFKG"
     gene            complement(13469..14623)
                     /gene="coaBC"
                     /locus_tag="RTF91_000526"
     CDS             complement(13469..14623)
                     /gene="coaBC"
                     /locus_tag="RTF91_000526"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDZ4943443.1"
                     /translation="MKTILLAISGSIAFYKSYELISLFKKEGFKVKVLLSNGVLKFAS
                     KMSFDALADEVLCEENESWKNSNNHIAFSKDADLILFVPASVNSINKLALGIADNLFI
                     QTLISANKPLIIAPAANTNMFYHFSTQNSLKLLKENKALIIEPICKVLACKHEGIGAL
                     AEVKDIFNITKRELLKEKFWQDKSVIITGGGTREKIDDVRCVSNFSSGKMAKAIADAF
                     YFLGARVKLLSSVEFNTPYELCKFESSQDLKKLLDKNLNHDFLIMTAAVSDFIPQSIK
                     GKIKKNEHLQGLNLYLSLNEDLLKNLNFKGKKIGFKMEFNSQNALENAKKSLKDKQLN
                     MVCLNIIDQKNYFGSDQNELYFITFKNESKSTLQSKEKLAFELAKWCEKL"
     gene            complement(14620..15909)
                     /gene="glmU"
                     /locus_tag="RTF91_000527"
     CDS             complement(14620..15909)
                     /gene="glmU"
                     /locus_tag="RTF91_000527"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDZ4943444.1"
                     /translation="MKTSILILAAGLGTRMKSQKPKVLQELCQKSMILHILKKAFTLS
                     DDVSVVLSHQKERVEKEILEHFPKAQILEQDLQNYPGTAGALRGFEPKNERVLILCGD
                     MPLVEQASLEVLLNNNAKLNLAVFKAKDPKSYGRVMIKNDSVEKIVEFKDANAQEREI
                     NTCNAGVYVIDSKLLKELLPLIDDNNTAKEYYLTDIVKLAKEKDVMIKAVFVDEDEFM
                     GINDKFELSVAENFMQEKIKKYWMQQGVIFHLPQSTFIGVDVEFIGECEVYENVRIEG
                     KSKIINSVIKSSSVIENSIVENSDVGPLAHLRPNCELKNTHIGNFVECKNAKLNTVKA
                     GHLSYLGDCEIDSGTNIGCGTITCNYDGVKKYKTIIGKNVFVGSDTQFIAPVKIEDEV
                     IIAAGSTVSVNVEKGALFINRAGHKMVKDYYYKKFQK"
     gene            16057..16791
                     /gene="fliP"
                     /locus_tag="RTF91_000528"
     CDS             16057..16791
                     /gene="fliP"
                     /locus_tag="RTF91_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344227.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HDZ4943445.1"
                     /translation="MKKILLFLLLNMSLFAAEATIPTVNLSLSAPNTPNQLVTTLNIV
                     IVLTILALAPSIVFVMTSFLRLIVVFSFLRQAMGTQSMPPNTILVTLALILTFFIMEP
                     VATKSYNEGIKPYLAEQIGYEEAFVKGAKPFKDFMLKNTREKDLALFYRIRNLPNPKT
                     IDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISL
                     PFKLLIFVLVDGWNLLVQRLVESFVT"
     gene            complement(16807..17577)
                     /locus_tag="RTF91_000529"
     CDS             complement(16807..17577)
                     /locus_tag="RTF91_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004315550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDZ4943446.1"
                     /translation="MRKIILIFMSFFALNLNAKDLVVRMELGYPPFEMSDKVGKPSGI
                     SVDFLETFAKKYHYNLIIKNIAWDGLIPALKTAKIDLIMSSMTITDERKKVVDFSIPY
                     AKANLAILTPLKSDIKNIKDLDKKGKILALKRGSTGHLYAVKNLKNATINLFDKENAA
                     ILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVQKGNTELKKE
                     LDEFITESKKDGFFDSLGEKYLKDVKDTFKKNNLDFFF"
     gene            complement(17953..18672)
                     /gene="kdsB"
                     /locus_tag="RTF91_000530"
     CDS             complement(17953..18672)
                     /gene="kdsB"
                     /locus_tag="RTF91_000530"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDZ4943447.1"
                     /translation="MIIIPARLKSSRFHEKILCDINGMPMFVATAKRVSKVDEVCVAL
                     DDERVLNIAKEYNLNVVLTSKDHESGTDRINEACEKLALKDDEIIINVQADEPFIECE
                     NLLKFKDFASSCLDKKAFMVSCYKKITQEEAKDPNLVKVLCDKEGFALYFSRAKIPYE
                     RENYEESFKGHLGIYAYSVKALREFCSLPSSALERAEKLEQLRAIENGKKIKMLEIST
                     TSMGIDTKEDYEKALQIYLGK"
     gene            complement(18669..20081)
                     /locus_tag="RTF91_000531"
     CDS             complement(18669..20081)
                     /locus_tag="RTF91_000531"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDZ4943448.1"
                     /translation="MKLVESRNINNVSSFKEALINPNAPEGGLYSPLKLPIFKGEKYA
                     NLPYKDFALKLIESFDFGEEELFKKALKSYESFDNKNTPISLQKIAEKTYINELWHGP
                     TRAFKDMALQPFGVLLSEFSRDKNILIICATSGDTGPATLKSFENAKNVKVVCMYPKG
                     GTSRVQELQMRALDKDNLKVFAIDEDFDAAQRTLKELLFSKDFQDEIKALNYELCAAN
                     SVNFGRILFQIIYHYYASLKLFNEFLEEVQIIIPSGNFGNALGAFYAKKMGAKISKIK
                     IASNANNVLSEFFNQGIYDLREKSLKKTISPAMDILVSSNVERLLFAKFKDKRTKELM
                     NLLKNERYFKLKKEELQSLQEDFEADFCNDEECMQFIKQSKILIDPHTATCFKMLDPL
                     KPSIITSTAEWTKFTPSMIKTLYGRDSKNEKEDLKFIAKEFNTQVKDEILALFDLKNS
                     DEKVFETKNMKKEILDWMRK"
     gene            complement(20082..20984)
                     /locus_tag="RTF91_000532"
     CDS             complement(20082..20984)
                     /locus_tag="RTF91_000532"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDZ4943449.1"
                     /translation="MLWLDNYFFKPNFWQKCLAFILLPLSVLYAFFAILNTFFRKKVD
                     FKKPIISVGNLSFGGNGKTPLCKAIAREFDGVFIVLRGYKRKSKGLFVVKNQKGILCT
                     LSQSGDEAMEYAFEKNIKGVIVSEDRVKGIEKAFELGAKIVVLDDAFSKFHIEKFDIL
                     LESKIKPYFTFTLPSGAYRLPKFYERKADFIALEGRDFVRYSFVKENPKAVLVTAIAK
                     PFRLYEHFIKARACYFFKDHYEFKKEELKNLLKKHNCDTLMLTFKDFVKVKDFGFKCQ
                     IIELNIELKDSLREKIKTYIKEFE"
     gene            complement(21008..21748)
                     /locus_tag="RTF91_000533"
     CDS             complement(21008..21748)
                     /locus_tag="RTF91_000533"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HDZ4943450.1"
                     /translation="MDWQKITEKICDFIKEKVKSSQTQGVVLGLSGGIDSALVATLCK
                     RALKKNVFALLMPTQISNKANLEDALRLCKDLELEYKIIEIQSILDAFLRQSESITQI
                     AIGNFAARIRMSLLYDYSALKNSLVVGTSNKSELLLGYGTIYGDLACAFNPIGELYKS
                     EIYTLAKHLNLYENFIKKAPSADLWENQSDEADLGFTYAKIDEGLKALENNDEKLLKT
                     LDISLIAMLKNRIQKNAFKRKMPEILEF"
     gene            21823..22419
                     /locus_tag="RTF91_000534"
     CDS             21823..22419
                     /locus_tag="RTF91_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDZ4943451.1"
                     /translation="MRIIKQACGIYETNCYILFTEKGEFIIDPGIDALLFIKQHVKNP
                     LAILNTHGHYDHIWDNAKVKKEYNIPIYIHKNDAFMLHDDFNKGYDSSDADFLVDNED
                     ILNICGVDFKFHFLPGHTPGCTMIEIIGKNIMFSGDFLFYRNIGRWDFPYSDANLMKQ
                     SLEKIMTYKEDFRLLPGHGQETTLKEEQIHLPSWLKYF"
     gene            22432..22737
                     /locus_tag="RTF91_000535"
     CDS             22432..22737
                     /locus_tag="RTF91_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943452.1"
                     /translation="MDLDQILLYAFIFLNLFALLGLFLGNKKKNQFNNKKFYKICPCK
                     KMAENGSLSTICIYSAVGGFFYSVLSIGFIGFGNLTLNFIFLLAVLSVFLGWKLKLD"
     gene            complement(22778..23557)
                     /locus_tag="RTF91_000536"
     CDS             complement(22778..23557)
                     /locus_tag="RTF91_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HDZ4943453.1"
                     /translation="MNTEFQGKTLVISGGTRGIGKAIVYEFAKVGVNIAFTYNSNAQI
                     ADEMVQDLEKNYKIKARAYEFNILEPETYKEFFEKIDADFDRVDYFISNAIISGRAVV
                     GGYTKFMKLKPKGINNIFTATVNAFVVGAQEAAKRMEKVGGGSIISISSTGNLVYIEN
                     YSGHGTAKAAVEAMARYAATELGEKNIRVNVVSGGPIETDALRAFTNYEEVKQATINL
                     SPLNRMGQPEDLAGACLFLCSNKASWVTGHTFIVDGGTTFK"
     gene            complement(23557..24453)
                     /locus_tag="RTF91_000537"
     CDS             complement(23557..24453)
                     /locus_tag="RTF91_000537"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDZ4943454.1"
                     /translation="MDKSIIIGAMTALITPFKNRKVDEQSYARLIKRQIENGIDAVVP
                     VGTTGESATLTHEEHKTCIEIAVETCKGTKVKVLAGAGSNATHEAVDLAKFAKEHGAD
                     GILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCE
                     NIYGVKEASGNIDKCVDLLAHEPRMMLISGEDAINYPILSNGGKGVISVTSNLLPDII
                     STLTHFALDENYKEAKKINDELYNINKILFCESNPIPIKTAMYIAGLIESLDFRLPLC
                     PPSKENFAKIEEVMKKYKIKGF"
     gene            complement(24446..25696)
                     /locus_tag="RTF91_000538"
     CDS             complement(24446..25696)
                     /locus_tag="RTF91_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDZ4943455.1"
                     /translation="MINYEKIQLKNKLEVYALPVNKNSDVISVDIFYKVGSRNEIMGK
                     SGIAHMLEHLNFKSTKNLKAGEFDEIVKGFGGVDNASTGFDYTHYYIKCAKKNLDKAL
                     ELFAELMANLNLKDEEFQPERAVVLEERRWRTDNNPLGFLYFRLFNHAFMYHPYHWTP
                     IGFFKDIENWSIEDIKEFHSIYYQPKNAILLVSGDIENKEVFELSKKHFEKIKNIKAI
                     PKIHTKEPKQDGAKRIYLHKNSDTELLALAYKIPNFKHKDIPALNALAELLGSGKSSL
                     MNEILIDKLNLINDYYAYVNDCIDENLFIFICNCNPNIDAKRVEKELLKIIDKFKMGK
                     ISQKDLQRVKNNVKSDFIFSLNNASAVANIYGSYLARGDINPLLNYEKDIQNLELKDL
                     ISCAKKYFIQENSTTVILRKDLNG"
     gene            complement(25693..26751)
                     /locus_tag="RTF91_000539"
     CDS             complement(25693..26751)
                     /locus_tag="RTF91_000539"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDZ4943456.1"
                     /translation="MAYEMMKPLLFKLDPEHAHALVEYNLRALNASFPGILSFLAHKY
                     IVDDESLRQNLLGLDFNNPIGLAGGFDKNATMIRPLSALGFGFLEVGTFTPKPQEGNE
                     KPRLFRLVEQESIQNAMGFNNEGAEKIALRLAKIYPFVLPLGVNIGKNKITPNDKALE
                     DYFTLFRDFKDLCDYFIVNISSPNTKNLRELQNDDFLSTLLEEAKKITSKTILVKIAP
                     DMKIDDALKLCENAIKKGANGFILANTSVDYTLLDNNRTFGGISGKLITEKSGIFFKE
                     VAKVFFGKTLLIASGGVDSADIAYERIKNGANLVQVYTALIFKGPSLVKNINQNLIEL
                     LKKDGFLHISEAIGVNLK"
     gene            complement(26783..28525)
                     /locus_tag="RTF91_000540"
     CDS             complement(26783..28525)
                     /locus_tag="RTF91_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943457.1"
                     /translation="MHNEMNLKEVLIRFKPFYKRYWKQFAIAIFGMILASGGTAGSFY
                     ALEPILNYIFVEKNEALLYTVPFLLVLMYFLKNLGTYLQSFYVSFIGTDMLRVLRARV
                     LKNVLHLDMDFFKRYRSGELVSRCTNDINALQSIVSSIIPDFFRELLTAIGLLLVVLY
                     QSPTLAFFALVILPLAIFPLVWFARKLKKYARNIQETNSDLLSYLGEIFSNIELIKAN
                     DNEKKESDKFAKHNDTLCKLNLKSARIDALTSPLMDMMGSVGVAVVIIVGGREVINGS
                     MSVGSFISFVSALFAIYTPLKRLSSLYGKLQGAVAASERTFYLLDLKPQIKGGNKELK
                     SIEKISFENVEFAYENPYKSVLKGVNFDFVKGQMLALVGTSGGGKSSIINLLMYFYEK
                     QKGKILLNQEDISTFTIESLHAKIGLVTQNIYLFNDSFAANIAYSEELEEEKIKQVLK
                     LANAYEFVKEMGGIWVEVKEHGKNLSGGQKQRIAIARALYKNPDVLIFDEATSALDNE
                     SEKAIVKTIENLKKDRLILVVAHRLGTIENADKIVVLDKGKVLAIGRDEELLQTCALY
                     QKFKSKEKTKPSFS"
     gene            complement(28515..29906)
                     /locus_tag="RTF91_000541"
     CDS             complement(28515..29906)
                     /locus_tag="RTF91_000541"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDZ4943458.1"
                     /translation="MRLLDSVIKEKVKLDKKDISIYLCGPTVYDDAHLGHARSSVCFD
                     LLRRVLLANGNRVKFARNYTDIDDKILKKMAKSGQSLEEITEFYIKSYEEDMKALNVL
                     DPDFKPRATHYIAAMLDLIKKLAKGELVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS
                     RLSNEVQKRNESDFVLWKFDENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGI
                     DLLFPHHENEAAQCRCGCKRILANIWLHNGFVKIDGEKMSKSLNNSFFIKDALKEFMG
                     EALRFYLLSSHYRSHFNYSLSDLENSKKRLDKFYRLKKRVELSEISDFDVLNNIEIKS
                     EIAKQILKALNDDLNISKALALLDDFISNANLELDKESKNKFLKQNIKEALSELAKIF
                     GFGFMDTTLYFQWGVSKEEQEEIEGLILERTEAKKNKDFSTADAIREQLSSKKIILLD
                     TPNGTIWEKMNAQ"
     gene            complement(29906..31357)
                     /gene="murJ"
                     /locus_tag="RTF91_000542"
     CDS             complement(29906..31357)
                     /gene="murJ"
                     /locus_tag="RTF91_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDZ4943459.1"
                     /translation="MKSLVFKNFIINALGILFSRILGLARDVLIALFLGAGLYSDIFF
                     VALKMPAFFRRIFAEGAFGQSFLPNFVKAKKKGAFCVSVMIQFSLIVFLFCLLVSFFS
                     SFFTKLFAFGFNADTIALAAPLVAINFWYLFFIFLVTFLGAILNYRQKFFITSFSAAL
                     FNLSIVIAAFFVDKNAPQNTLYYFSYAIVLSGVAQLILHLLVLKNNLVIRAMVLSIKF
                     KKVKTKLQDFYSNFFHGVLGSSATQFSSLLDTTIASFLMSGSISYLYYANRVFQLPLA
                     LFAIALTQVSFPKILKHLKSDQENLALKFMQRALIFLSILLITSSIIGSVFALEISKL
                     LFERGNFTYEDSVITAYVLIAYLIGLLPFGLQKLFSLWLYAKFKQKTAALIAVKSLII
                     SALCSIAFIFLIKDESLKVIAVALSSSISAFYLLGANIKEFGFKKFFALISMKICLLV
                     IVALIVFTILLVLIKPYILSFFIGIFTSFKGVF"
BASE COUNT        11117 a         5294 c         4072 g        10875 t
ORIGIN      
        1 aaaaaatttt aaatattgcc taattcttga aaattatgat atttttgaac aagaatttga
       61 gaataaagaa aatcaaattc caagtttatt ttaaaattac tccttcattt tcaagtaaaa
      121 atctttttat ttcaagccct ccattatatc cacctatgcc attacttgca atgactctat
      181 gacaaggtat aaaaatagga attttatttt tagaatttgc atttccaaca gctctaaaag
      241 cttttgggtg attaattttt tctgctatat ctttataagt aaccatttta ccataaggaa
      301 ttttcattaa agccttataa acttttaatt caaaatccgt accttgcatt aaaataggaa
      361 cactaaattt tttaagctta tgagcaaaat ataaatcaag ttcatatttt gccaagtcaa
      421 gcaaattaca acttttattt atctttttgt catgacaaaa gtcaacctca gttaaaaatt
      481 ttccatcact atgtaaagat aggtaacaca aagacatttt ataataaact ttaaacattt
      541 tttatccttc aaagagctac aattataaca aaaaatattt aaggagtaga aaatgtcttt
      601 tatgcaagaa tataataaac ttgtcaaaga aagagccgct ttgggtatac caccccttcc
      661 tttaagtgca aaccagacta aagaactttg taaactactt gaaaatgaaa acaatgaaga
      721 gcttgtaagt cttttagaaa acagggtaaa tcctggtgtt gatgatgcag ctttggttaa
      781 atgtgaattt ttagattcta tacttaaagg caaaatcaat gccccaagca tagataaaaa
      841 aagggcttta aaaatgcttg gaactatgct aggtggatat aatgttaaag ttttaatcga
      901 tgccttaaaa gatgaaaata tagctaaaga tgctgcagaa gtgttgaaaa atattatttt
      961 tgttcatgat aattttcata ctatagccga acttagcaaa aacaatccac atgctaaaaa
     1021 agttttacaa agttgggcca atgcagattg gttcaacaaa aaagaaaaat taccacaagt
     1081 gattaaatgt atagttttta aagtagcagg agaaactaat accgatgatc taagtcctgc
     1141 aggagatgct tttacaagaa gtgatattcc tttgcatgca aacgccatgc taaaagtaag
     1201 acaagcagga tctttggaaa aaatcaaaga acttaaaaaa agcggtcgtg aagtggttta
     1261 tgtaggtgat gttgtaggaa caggatcaag tagaaaatct gcaataaact ctatacaatg
     1321 gcacttagga aaagaaatag aaggtgtacc aaacaaacat agcggtggca tagtgatggg
     1381 ttcaaccata gcgccgattt tctttaatac tgctcaagat agtggagctt tacctatcat
     1441 ctgtgatgta acaaatctag aaatgggtga tgaatttgaa attcatcctt atgagggaaa
     1501 aatcataaaa aatggctcca taattacaga gtttaaactc agtccaaaca cacttttaga
     1561 tgaagttaga gcaggtggaa gaatcccact tatcataggt cgtggacttt gtgctaaagc
     1621 tagagaattt ttaggaatgg aaaatgaaaa tatctttacc aaacctgaac aacctaaatc
     1681 ttcaagtggt ggttatactt tagctcaaaa aatgctaggt cgcgcctgtg gaatcgaagg
     1741 tgtatgtcca ggtatgtata tagaacctat gactttaact gtaggctctc aagatactac
     1801 aggtcctatg actagagatg aaattaaaga acttgcaagc ttaggcttta atgcagactt
     1861 tgttatgcaa agcttttgcc acacagccgc ctatccaaaa gtaagcgatt caaatctgca
     1921 taaaacctta ccaaatttta tgacaagtcg tggtggagtg agtttaaaac cgggtgatgg
     1981 agttattcac tcttggctta accgctttgt attaccagat accgtaggaa caggtggaga
     2041 ttctcatacg cgttttccta taggaatttc tttccctgca ggaagtgggc ttgtagcttt
     2101 tgccgcagtt actggttcta tgcctttaaa tgtacctgaa agtgttttag tacgttttag
     2161 tggagagttg caagctggag ttaccttaag agacctggtc aatgctatac cttactatgc
     2221 aatcaagcaa gggcaactta ccgttgaaaa gaaaaacaag aaaaatattt ttgcgggaaa
     2281 aattttagaa atagaaggct taccaaattt aaaagtagaa caagcttttg aacttagtga
     2341 tgcaagcgct gaaagatctg cagctgcttg tagtgtagat ttgagtatag aaagtgtaag
     2401 tgaatatatc aaatcaaata tctctttaat tgaagctatg atagaagcag gatatgaaaa
     2461 taaagccacc cttgctagaa gagctgaaaa aatgagagaa tggcttaaaa accctactct
     2521 tttaagagct gataaagatg caaaatacgc ttatattata gatatcaatc tcaatgacat
     2581 taaagaacca atcttagctt gcccaaatga tcctgatgat gtggctactt taagtgaaat
     2641 tttagctgat gataaacgtc caaaaaacat agatgaagtt tttgtaggtt cttgtatgac
     2701 caatatagga cattatagag ctttgggaga aattttaaaa gataaaggta tacttaaaac
     2761 cagactttgg gtagtgcctc caacaaaaat ggataaagca caacttacta atgaaggtta
     2821 ttatagcatc tttggtgcag caggcgctag aatagaagtt cctgggtgtt ctttgtgtat
     2881 gggtaatcaa gctagagtaa atgatggatc tgtagttttc tcaacttcta caagaaattt
     2941 tgataaccgt atgggaatgg gtgctaaagt atatctaggt agtgcagaac ttgcagcagt
     3001 ttgtgcaata ttgggtaaaa ttccaaataa agaagaatac ttacaaattg tcagtgaaaa
     3061 actaaacgac ggacataagg ggaatatcta tagatattta aattttaatg aaattgaaaa
     3121 tttcaaactc gaaaattaat actaaaattt tttaaaggaa aaatattgaa gttattattt
     3181 gcttcttttt gttgttttgc aagtttaata gctagtgata ccattaactg cgataatatt
     3241 aaaaacaata aaacattgct aaatgaaagt tcaaatttag attatctaaa tatagcctca
     3301 agttgcaaag tatctttaaa aaatcaagat tttacaaaaa aactctacgc aatttctaat
     3361 gaaattcgcg gaggcaatag ctcttgtaat ggcatagctt atttgccaaa attacaacaa
     3421 tttgattttt tgttattgaa aatagccatt gatcctattg cttatcaaaa aactttagat
     3481 acgcccgaaa atttacaaaa aaaatatgat attttaaaat catattttag atattgggca
     3541 tatcaaagta taggaaattt tagactttac aaagcttttt ggcaagaata taataacgct
     3601 atagagcctt tagaaaagta ttttgaaaat aattttaatt ttgatgaagg tagtaatatt
     3661 tactatacta gtaacgcctt aaatgaattt ttaaattggg ctgtaggtga aacaaaaatt
     3721 tacaaagata ttagcctttt ggtaaaaatc gtatcaaata aaaattattc agcatcttat
     3781 atacaagatt ttattttttc aaataatcca agtcaagatg aacttaccat agccttacaa
     3841 gcagccttgc ttaatcaaag aaaaaaagat attttagaac ttttaattcg ttttggtgct
     3901 aggattgatg aaggttatga aagtgctatt ttttacgcat tggaaaatta tgaaaataca
     3961 aattttttaa tccaaaaagg agcaaatgtt aatcaagcca atacctttgg aaaaactcca
     4021 cttttttatg ctatagaatt taatcgtctt gatatagtga aattacttct tgaaaatggc
     4081 tcaaatgtca atcaaaaata catcaacaat aatgaaaaat tagctcttag tgctaatata
     4141 ggatcaaatg caccttattt tattacattt tgtgctttag ggcacacttc aaaaaatgtt
     4201 ttaatgcacg ctgcagctta tggaaatatt gaaattttaa aactccttat ctcaaaaggg
     4261 gcaaatctta atgctgttga tgatcttggt tttaatgcac ttgattttgc tctagcagca
     4321 ggtaaaaaag aaaatgctga ttatctaaaa agtttaggtt taaaagcaaa tgaaagtcta
     4381 ttttacggag gtagtctaga atgaaaactg catttattac aggagcaagc tcaggttttg
     4441 gtagagcctg cgttaaagct tttgtacaag aaggttacaa agtaatcgct cttgctcgac
     4501 gtaaagaacg cctagaagag ttaaaaaata cctataaaga tgaaatttat accctttgta
     4561 tagatgtaag aaatcaaaaa gaaatcttta aagctattga gagcttaccc aaagaatttc
     4621 aagaagttga tgtgcttttt aataacgcag gcttagcttt aggtgtagat gaatttgata
     4681 agttaaacct tgaagatatt aatactatgg tagatacaaa tatcaaaggt tttttatatg
     4741 ttgcaaaagc cattattccc atacttcgca aacaaaaaaa tgcttatatt tttaaccttg
     4801 gttctgttgc aggacgcaat ccttactttg gaggcaatgt gtattgcgga actaaagcct
     4861 ttgtaagaca attttcttta gccttaagaa acgatcttag aggaagtaat ataaaagtaa
     4921 caaatattgc tccagggctt tgcaagactg aatttagcga agtgcgtttt aaaggagata
     4981 tccaaaaagc tgatgcagta tatgaaaata cccaatttat cagcgccgat gatattgcta
     5041 aagtggtaat gtctatcatc agcttgccaa gccatattaa tgttaatgaa atcgaactta
     5101 tgcctgtaac acaaacttgg aatggatttt atatagaaag agatgaatga ataaattttt
     5161 agttttattg tttttacctt tagttgcatt tgcaaactct tcagaagcag tagaaaatgc
     5221 taatttattt ggagctttta cactcatacc acctttagtt gctattgctc tagcttttat
     5281 tacaaaagat gttattttat cactctttgc tggagtttta agcggaactt ttctacttag
     5341 cctttctgca aatattttta aaacagaaca tttagctttt gtaaattttt ataatactgc
     5401 agtagaatct ttttcaaaaa ttatttctta tattttaagt tctacctcag atcctgtaaa
     5461 tgcaggaatt attttgcaaa ttctttgtat tggtggtctt gtagcacttg ttacaaaaat
     5521 gggtggcgca aaagctgtag cattaaaatt tgctaaaaga gctaagtcgg ctgtatcagc
     5581 tcaaattaat acctggtttt tggggctttt aatttttttt gatgattatg ctaatttgct
     5641 tattgtaggt cctattatgc gtcctttagc agataaattt aaaatttctc gtgaaaaatt
     5701 tgcctttatc attgactcta ctgctgcccc tgtagcaggg atagcagtaa tttctacttg
     5761 gataggttta gaagtttctt tgattaaaac cgcttatgag cacataggca ttaacgatat
     5821 tagtgctttt agtatttttg ttgaaactat accttatcgc ttttacaata tcttcatgct
     5881 tttttttgta gtcatgactg cactcatggg gcgtgaattt ggctctatgt ataaggctga
     5941 agtgcgcgca agaaccacag gacaaatcgc acctttgcat aaatcaggca cactagatac
     6001 tgctgaatta gaagatcagt ttttagcccc taaaaaagga attaaaatac gcgcatttga
     6061 tgctattgtt cctattttta ctttaattat cttagctata ttgggatttt attttaatgg
     6121 acttagcact ctagaaggag aagaacttgc aaaagcaagt gcaaatcctt tatcttttga
     6181 aacttttaga gcttcctttg gaaatgccga ttcttccgtg gtattatttc aagctgcttt
     6241 gtttgctgct attgtagcga tttttatcgg ggtatgtcgt aaaattttca accttaaaga
     6301 agcagtagaa acttggatat acggctggaa aacaatgatt tttaccatag tattgctttt
     6361 atttgcttgg tcactttcaa gcatagtaaa agatctagga acttctttat ttatcactag
     6421 tttacttgca gataaattgc ctgagtttat tttgcctgct actattttcg cctttgcttc
     6481 agctatctct tttgctatag gaacaagcta tggaactatg gggattttaa tgcctttagc
     6541 tgtaccttta gctcatgaaa tcgcaaaaat taacggcatg gacgcaaatg ctatgcatca
     6601 ttatatggtg attaacataa gctgtgtttt aacaggtgcg atttttggaa atcactgctc
     6661 gccaatttca gataatgtaa ttctttcatc tatgagtgca aaatgcgatc atatggaaca
     6721 tgtaagaaca caaattcctt atgctttgtt tatctgtggt atttctttaa tcactggata
     6781 tattcctgtg tctttagggt ttagcgtttg gtttgtttta cctttaaatt tcattcttat
     6841 tgcattttta ttaaggctca ttggaaagaa aattcatgaa tcttgaaaat tttctaactt
     6901 tagatgaaaa acattctttt gtaaaaacat attttaaaga attttataca aaagatttta
     6961 aactttttag ctcaaaagct aaacactatc gtacaagggt tgaactttca ttttatcatg
     7021 aaaatgatac gcttttttat gcaatgtttg attcgaaaaa taaaaaaaaa tacattataa
     7081 aacatttaga ttttgctgat gaaaaaattt gtacttttat gccaaaactc ttagaatact
     7141 tgcgtcaaga tgatagatta aaagaaaaac tttttggtgt agaattttta actacaaaac
     7201 aagaacttag tataacttta ctctatcata aaaatataga agatataaag caaaatttag
     7261 aaaatttaag caatatcctt catatcaatc ttatagcaag aagcaaaggt aaaaaacttg
     7321 tttttaaaac agaaaattta agacaaactt taaatattca agatagagaa atattttatg
     7381 aatttaacaa cgattgtttt atccagccca atactgctat aaatgaaaaa atgatcactt
     7441 gggtatatga aattttaagc actcaaaaaa ggatagattt acttgaactt tactgcggat
     7501 atggaaattt tactttagct ttagcacaac tcttctttaa agttttagct actgaaattt
     7561 caaaaaacaa tattaatttt gctttaaaaa attgtaaact taacaataca acaaatatcc
     7621 attttgcaag actttcaagt gaagaattaa gcttggctat taaaaaagaa agagattttt
     7681 ttcgtttacg agatattcaa ttagatgatt ttaatttctc tcatgtttta gttgatcctc
     7741 cgcgtgcagg acttgataaa agtgtgattg atttagtaaa aaaatatgaa aatattattt
     7801 atatttcttg taatcctatt accttaaaag aaaatttaaa agaattaagc ctaacacaca
     7861 aaatagaaaa ttttgctctt tttgatcagt ttgtcaacac cccgcatctt gaatgcggag
     7921 tatttcttag caaggtataa aaattaacta ataccatgat acaaagcaca aattacaaaa
     7981 ggatgaataa aagcaccaag ggatttttct ttttaggatg agaaataaca aaacaaaggt
     8041 taataatgaa cgaaaaagaa actatctctt acatcataaa tacaagcaaa aatatgctat
     8101 attcgcttta actccaaaca aaacaaaagt ttcttatagg gtagcagaat ttttacaaag
     8161 taaaaattat aaaatttttc cttatcctaa agaagatttc attttaaatg aaaaagttta
     8221 tagaaattta gatcaaataa acgataaaat cgatacactt atacttttta gaaaaggtga
     8281 aatagcacta gaacttcttc ctaagcttgt tgaaaaaggt attaaaaact tatggcttca
     8341 actttgtatt aataatgaaa aagctaaaga aaaatgtaaa aaactgggta taaattttat
     8401 acaaaatcgc tgcattatgc tagaatatcc acattttaaa ataaaggaaa aatagtgcta
     8461 gaactcaata aaatttacaa agcaaaacaa caaatttcag gatttgtaaa taaaactcct
     8521 tttatacact cttctttttt aagtgaaatt tgtcaaagtg tgatttatct taaaaatgaa
     8581 aatttacaaa tcacaggtgc ttacaaaatc cgtggagctt acaacaaaat agccaatctt
     8641 aatgccaaac aaaaaaaaca cggagttatt gcagcaagtg cgggaaatca tgctcaagga
     8701 gtagctatta gtgcaaaaaa atttaccatt aaagcagtca ttgtaatgcc agaatccact
     8761 ccacttttaa aaatttctgc tacaaaagcc ttaggagcag aagtgatact taaaggagat
     8821 aatttcgatg aatcttacgc ctttgcaact gcttacgcta aagaaaacaa tcttagtttt
     8881 atccatcctt ttgaagatga atttgtaatg gcagggcaag gaactttgat gcttgaaatg
     8941 cttgatgaag taaacgatct tgatatgatt atcgcacctg ttggaggcgg aggactcata
     9001 agtggtattg caagtgcagc taaacaaatc aatccaaata ttaaaatcat aggagttgga
     9061 gccaaaggag ctcctgcaat gtatgagagt tttcatgcca aaaaaataaa aaacgcaaaa
     9121 agtgtgcgta ccatagccga tggcattgct gttcgcgatg taaatcctat taactttaac
     9181 ataattttag aatgtgtaga tgattttatt caagttgatg ataaagaaat tgccaatgcg
     9241 gtgttatttt tacttgaaaa acataaaatc atagtagaag gtgcaggagc tgcaagtgta
     9301 gctgccttac ttcatcaaaa aataaatacg caaaatcata aaaaaatcgg tgtggtttta
     9361 agtggtggca atatcgatgc acaaatgcta aatattatca tagaaaaagg tttatttaaa
     9421 tcttatagaa aaatgcaaat tcatgttact ctagtagata aaccaggagc attattacat
     9481 cttacagata gcttaaaaat agctaatgca aatatagtga aaatcgacta tgatagattt
     9541 tctaccaaac ttgattatgg cgatgcaatg atttcaatca ccctagaaac aaaaggcaaa
     9601 gaacatcaag aagaagtaag aaaaatttta actcaaaagg cttttaattt ttacgaaagt
     9661 ttttaataat gaatgcgact taaataaagt ccatttggtg gcgctaaaaa gcgattgtat
     9721 cgctttttag cttcaatctg ttctttaagc tctttttcgc tcatttttcc ttctaaaacc
     9781 tttaaaacac ttgccacact tagtcttatt tgccctctta aaaaaccatt agccttaaaa
     9841 cgaaaaatac taaaatcctt gtaagtataa gccctagcaa gaaaaatttc tcttagggtt
     9901 gttttattat cccctccact tttacaaaaa aatttcaaat ctttttttcc cacaaaaaaa
     9961 cttaaaagtt cattagcctt atctaaatca aatttaggat aaaaatgcac ataagaagcc
    10021 ataaaaggac tataagaagc atgagaaaat atataacgat attccctact ttttacatca
    10081 aatcttactt caaaatcatc ttttactttt tcaatttttt taatatgaat aaaagggtgg
    10141 gaaaatttat tgagctgttt tttaaggtat tctaaatttg taaaatactc cccacactcc
    10201 acactagcta cagcatagct tgcatgcact cctttatctg tgcgtgaagc cattaaaaga
    10261 ggtgaaaaaa tacccaaatg cgataaagct tcacctaaaa catcttgaac acttttttta
    10321 tgaggttgtg tagcagaacc taaaaaagct gatccatcat aagaaaatat aatttttatt
    10381 ttcattaata acgacttaaa atcatttttt taaaacaata acctgaaaca agcaaactta
    10441 aagaaaaaat tccaaagcaa gctaaaattg gaggttgaga aaaagaactt aaaagtccaa
    10501 aatatatagc aatcactcca aacataccta aataaacata acctttttca taacgataag
    10561 taaccaaacc aaaacaaagt gcaaaaagtg tgctagcaag cgggaataaa gctatagttg
    10621 cataaataac aaattctctc gctctttgag ggttttcatt tagatcattc caatactcat
    10681 aaaatttctt tgtctgaaga ttatctgtat taaactgggt atttaccacc aaagtatcaa
    10741 attctccact aaaaatactt tgaccttgat caaaattata cattttaccc tgatttaaac
    10801 taaaagcaaa accatcatct tttctttgca catgcgcttc tttggctatg ataagttgct
    10861 ccttatcatc tgccttatgt ttagggtgat acataattat attttcatat ttaccgctat
    10921 cttgtttttc tataaagatc atccaatcta aaaacttttg cccgaattct cctgttttgt
    10981 aattaaattt cacttgagtg cttttataat ttacaaaatt atcctgaagt tcaaatacta
    11041 taggtatcat taccaaagct acaacaagca ttaaagcact gattaaactt gcgattttga
    11101 gaaaaaattt tgccaaaatc ataggagaaa accccaaggt aaaaagcact atgctttcat
    11161 tttctttaga aagcctaaac aaagccaaag ttaaagaaat aaaaaaagat ataggcaaag
    11221 taaaaattaa aattctaggc agcataaaac cataaagctt taaaagatcc aaaaagctaa
    11281 tctgtatact tgaagtaagt tttgcaagct ggataaaaaa caccatagat acaatagtaa
    11341 aaagcacaaa aaatatagat aaatttgtac ttaaaaattg atttaaaaca taccttaaac
    11401 taagcttcat taaaataatc ctaagttttt gtaaaataaa actgccacaa aagcgatatt
    11461 taaaaaaggt atcatagcaa gttcttgctc ttttattgct ttaattttta aaaaaataaa
    11521 aaagggtaag gttaaaattg aagctacaaa taatactaaa aatccatatt caaaacctaa
    11581 aattccacct atacacgaca taataataat atctgcatca cctaaatttt caaaaatttc
    11641 atcttttttt tgaaaattca tcagaaagaa aactaaactt tttagtaaaa aaataaatcc
    11701 tccaaagcta aaagcattga gcaaaaaacc tccgctaaac tctttaaaaa tcaaaagata
    11761 taaaatttca ctttctttaa aagcgtaaca aaaagcaaat aaaaaagcac tccaaagtaa
    11821 aatttgtggc acggctttaa gtttaatatc caccaaggaa agtaagaaaa aattaaacaa
    11881 aaataaagat aaaaataaaa aatcatgaaa attttgactt aaaaaataaa ccaaaacaag
    11941 taaaaccata cctacaattt cattaatcaa caaagaaata ggtaaattac atttacaagt
    12001 tcgacatttt gcccttaaaa aaaggtaaga aaaaatagga ataatttcat aatattttaa
    12061 ttttacaccg caagaaaaac aaaaagaacg cgaggtaaaa aaggattttt tttcgactat
    12121 tctacttgcc aaacttgcac aaaaagaacc taaacaagcc cccaaaatca ttatgaaaaa
    12181 tatcattttc caaaagttct ttctctattt ctaaattctt taataatcct tttaaattct
    12241 cttttagtga gagatggaaa taaagtttca ctaaaataaa tttcagcata cgaacactgc
    12301 caaagtaaaa aatttgaaag tcttttagca tttccaacac gaagtatcaa atccacatct
    12361 aaagacagat ctaaattttg cgttagattt tcttcgttta attcaagttt tttttcaatc
    12421 acacgcttag ctgctcttat aatctcatct cttgcaccat agcttatagc taaattaaca
    12481 caaagtccat tgcaatgttt tgttttttct tctactaaaa taattttttc ttttagctta
    12541 tcttctaaac gcgataaatc tcctatagct cttaaactta cattattttt ttcaaatttt
    12601 tccaaagctt catctaaaca gcgatctaaa agttcaaaaa taaattcaat ttcatcttta
    12661 ggacgcttcc aattttctgt actaaaagca aaaaggctta aatttgaaat attttcctcc
    12721 atacaaactt ccatcagttt ttgcatagtt tttacccctt gagaatatcc aagttttgct
    12781 aaaaaaccct tagcttttgc ccaacgtcta ttgccatcca taacaacggc aaggtgtttt
    12841 aattcattca tttttcatcc tttaaaatca aaaagccttt taaaaacaaa caaaggttca
    12901 accttgcttt cttgtaatac attaaaatct aaatgttcat ttaaaaattt ttgcacctta
    12961 gcaaaaggtg taaaaacact aacaccttgc gaatctatca aaattttcaa agccccaaaa
    13021 acactaaaat ataaataaat ctctaaatat tttgctcttt tacgcatttg aaataaacaa
    13081 gatttatttt caaatataaa agggatatga taaatatttt caaagcttgc aaaaagcatt
    13141 tcttttaata tttgataacg ctctatatct ttacattcta aaagattttg tataataaaa
    13201 tttttataag aaattttatc ttctaaaagt gcgattatca aggccaatcc ctctccaaaa
    13261 ggtttaaaat taggacactt tgaaagatgt ttaaattgta taactccacc attttgcata
    13321 taaagttcag ccaagtactc agcgccaatt tcaagctcta tcatactttt agtttgaatc
    13381 tttttatgat ttaataaaag cgtgtaatgt ccatagcctg atttagccaa aactttcatt
    13441 tgtataggca aagtagaatt aatcatattt ataatttttc acaccatttt gctaattcaa
    13501 aagctaattt ttctttgctt tgcaaagtgc ttttactttc atttttaaaa gtgataaaat
    13561 aaagctcatt ttgatcactt ccaaaataat ttttttgatc aatgatatta agacaaacca
    13621 tatttagctg tttatctttc aaagattttt ttgcattttc caaggcattt tgagaattaa
    13681 actccatctt aaaacctatc tttttaccct tgaaatttaa atttttaagt aaatcttcat
    13741 ttaaagataa atacaaattt aatccctgca aatgctcatt ttttttaatc ttccctttta
    13801 tgctttgtgg gataaaatca ctcactgcag ctgtcataat caaaaaatca tgatttaaat
    13861 ttttatctaa aagctttttt aaatcctggg aactttcaaa tttacaaagc tcataaggcg
    13921 tattaaattc cacagaactt aaaagcttta ccctagctcc taaaaaataa aaagcatcag
    13981 ctatagcttt tgccattttt ccacttgaaa aattactcac gcaacgcaca tcatcaattt
    14041 tttctcttgt acctccacct gtaataatca cacttttatc ctgccaaaat ttttctttta
    14101 aaagctctct tttagtaata ttaaaaatat ctttaacttc agctaaagcc cctatacctt
    14161 catgtttaca agctaaaact ttacaaattg gctctataat caaagcttta ttttctttta
    14221 ataattttaa agaattttgc gtgctaaaat gataaaacat gtttgtattt gccgcaggag
    14281 ctatgataag tggtttattt gcggagatta aagtttgaat aaaaagatta tccgctatgc
    14341 caagcgcaag tttattgata gaattaacac ttgcaggaac aaataaaata agatctgcat
    14401 ctttactaaa agctatatga ttatttgagt ttttccaact ttcattttct tcgcataaaa
    14461 cttcatcagc taaagcgtca aaactcattt tgctagcaaa tttcaacact ccattagaaa
    14521 gcaaaacttt caccttaaaa ccttcttttt taaataaaga aataagctca taagatttat
    14581 aaaaagctat actaccgcta atggctaaaa gtatggtttt catttttgga atttcttgta
    14641 ataataatct tttaccattt tatgccctgc tctattgata aacaaagcgc ctttttctac
    14701 attgacactt accgtacttc ctgctgcgat aatcacttca tcttcaattt tcacaggtgc
    14761 gataaattgc gtatccgaac ccacaaaaac attttttcct ataatggttt tgtatttttt
    14821 tactccatca taattacaag taatagttcc acaacctata tttgttccac tatctatctc
    14881 acaatcacct aaataactca aatgtcccgc ttttacggta tttaacttcg catttttaca
    14941 ctctacaaaa tttcctatat gagtgttttt taactcgcaa tttggacgca aatgtgctaa
    15001 aggccccaca tcactatttt ccacaatgga attttctatc acgcttgaac ttttaataac
    15061 agagtttata atcttgcttt ttccttctat tctaacattt tcatacactt cacattcacc
    15121 tataaactca acatctacac ctataaaagt gctttgtggt aaatgaaaaa tcacaccctg
    15181 ttgcatccag tattttttaa tcttttcttg cataaaattt tcagccacgc taagttcaaa
    15241 tttatcatta attcccataa attcatcttc gtctacaaaa actgctttaa tcatcacatc
    15301 tttttctttt gccagtttta caatatcagt taaataatat tcttttgcgg tattattgtc
    15361 atcgatcaaa ggtaaaagtt cttttaaaag ctttgagtca atcacataaa ccccggcatt
    15421 acaagtattt atctctcttt cttgtgcatt tgcatcttta aattcaacaa tcttttcaac
    15481 actatcattt tttatcatta ccctaccata acttttagga tcctttgctt taaaaactgc
    15541 taaatttaat tttgcattat tatttagtaa aacttccaaa cttgcttgtt caaccaaagg
    15601 catatcaccg caaagaatca acactctttc atttttaggc tcaaaccccc ttaaagctcc
    15661 tgcagttcct ggataatttt gtaaatcttg ttctaaaatt tgtgcttttg gaaaatgttc
    15721 taaaatttct ttttcaacgc gttctttttg atgagacaaa accacactca catcatcact
    15781 taaagtaaaa gcttttttta aaatgtgtaa aatcatactt ttttgacaaa gctcttgcaa
    15841 gacctttggc ttttgcgatt tcatcctagt gcctaatcct gctgctaaaa tcaaaataga
    15901 agttttcatt ttctaccttt gttatataag aagtttaaaa tactatttta gcagtttaaa
    15961 gttaaaattc taattaccct taaactagtt tttagtcatc aaaagataaa atttaaattt
    16021 ctttaaatta aaaaagcaaa aaaaggtttt tgaattttga aaaaaatact attattttta
    16081 cttttaaaca tgagtttatt tgccgctgaa gcaactatcc ctacggtaaa tttaagctta
    16141 agtgcaccta acacacctaa tcagcttgtt actactttaa atatagttat tgttttaact
    16201 atacttgcac ttgccccaag catagttttt gttatgactt ctttcttacg tcttatcgta
    16261 gtgttttcat ttttacgtca agctatggga acacaaagta tgccacctaa taccatttta
    16321 gtaaccctag ctttaatttt aacttttttt ataatggaac ctgtggctac aaaatcttac
    16381 aatgaaggta taaaacccta tttagcagag caaataggct atgaggaagc ttttgtaaaa
    16441 ggagcaaaac cttttaaaga ctttatgctt aaaaatactc gcgaaaaaga tttggctctt
    16501 ttttatcgca tacgcaatct acctaatcct aaaaccatag acgatgtccc tcttacagtt
    16561 ttagtgcctg cttttatgat ttcagaactt aaaactgctt ttgaaatagg atttttaatc
    16621 tacttaccat ttttagttat agatatggtt gtaagttcag ttttaatggc tatgggtatg
    16681 atgatgctac cccctactat gatttcttta ccttttaaac ttttaatttt tgtattagta
    16741 gatgggtgga atttgttagt acaaagactt gtggaaagct ttgtaaccta aaaaggaaaa
    16801 tccttcttag aaaaagaagt ctaaattatt ctttttaaaa gtatctttaa catctttaag
    16861 atatttttcc cctaaagaat caaaaaatcc atctttttta ctttctgtaa taaattcatc
    16921 aagttctttt ttaagctctg tattgccttt ttgcaccgct ataccccaaa actcaggatt
    16981 ttcttgaaaa ggtgctaaaa tcgctctagt cgtatcttga tgtttttgcc aagtacgata
    17041 aatcgtaagc tgatcataaa aaaatccatc ggccttaccc tgtatcactt ccaaaatagc
    17101 agcattttct ttatcaaata aattaatagt tgcatttttt aaatttttaa ccgcatacaa
    17161 atgtcctgta gagccacgct ttaaagctag aattttacct tttttatcta aatctttgat
    17221 attttttata tcagatttta aaggagttaa aatcgccaaa tttgctttag cataagggat
    17281 actaaaatcc accacctttt ttctctcatc agtaattgtc atagaagaca taataagatc
    17341 tatcttggct gtttttaagg caggtattag gccatcccaa gcgatatttt taatgataag
    17401 attgtaatga tattttttag caaaggtttc taaaaaatcc acactaatac cgcttggctt
    17461 acctacttta tcgctcattt caaatggcgg gtatccaagc tccattctta caaccaaatc
    17521 ttttgcattt aaatttaaag caaagaaaga catgaaaatc aaaataattt ttctcataaa
    17581 tttcctttca agaattttta caaaaaatta tactgatttt atcttatttt gttattagcg
    17641 ataaaagcaa tttattataa gcttaaaaac attttaattt taacaatcac ttctaaaccc
    17701 tagtttatcc taaaagatta ttaagtctat ccttattata agaaatttat gctttcacta
    17761 cttgctagag tttatcaatt tgcattttaa acatccttta atttactagc attttgtttt
    17821 aaagcaaaac ttattagaat ttttcttacc ttgtgaaaat ataaaactat agtttgaggt
    17881 gttaagttac attaattccc taatttagat ttttgcctta atattaaaaa tctgttctgt
    17941 tttaggatgg agttattttc ctaaataaat ttgcaaagcc ttttcatagt cttccttggt
    18001 atcaatcccc atacttgttg ttgaaatttc aagcattttg atttttttac cattttctat
    18061 cgctcttaac tgttctagtt tttcagccct ttcaagtgca gagcttggca aagaacaaaa
    18121 ttcccttaaa gcttttacac tataagcata aatgcccaaa tgccccttaa aactttcctc
    18181 ataattttct ctttcataag gaattttagc ccttgaaaaa tacaaagcaa atccctcttt
    18241 atcacaaagc acttttacta gattaggatc tttagcttct tcttgagtga tttttttata
    18301 acaacttacc ataaaagctt ttttatccaa acaagagctt gcaaaatctt taaatttcaa
    18361 taaattttca cattctataa aaggctcatc agcttgaaca ttgataataa tctcatcatc
    18421 ttttaaagcc aatttttcgc aagcttcatt gatcctatct gtgccacttt catgatcttt
    18481 actcgttaaa actacattta agttgtattc tttagcgata tttaaaaccc tttcatcatc
    18541 taaagctaca caaacttcat caaccttact aactcttttt gcagtcgcta caaacatagg
    18601 cattccattt atatcacaca aaattttctc atgaaaacga cttgatttta atcttgcagg
    18661 tataataatc attttcgcat ccaatctaaa atttcttttt tcatattttt agtttcaaat
    18721 actttttcat cactattttt caagtcaaat aaagctaaaa tttcatcttt tacttgggtg
    18781 ttaaactctt tagctataaa ttttagatct tctttttcat tcttagaatc tctaccatat
    18841 aaagttttta tcatacttgg ggtaaatttt gtccattctg ctgtagaagt gataatgcta
    18901 ggttttaaag gatcaagcat tttaaaacaa gttgctgtgt gtggatcgat taaaatttta
    18961 ctttgtttaa taaattgcat acattcttca tcattacaaa aatctgcttc aaaatcttct
    19021 tgcaaactct gcaattcttc ttttttaagt ttaaaatatc tttcattttt aagtaaattc
    19081 ataagctctt tagttctttt gtctttaaat tttgcaaaca aaagtctttc gacattggaa
    19141 gaaacaagta tatccatagc tggagaaata gtttttttaa gacttttttc acgcaaatca
    19201 taaatgcctt gattaaaaaa ttcactcaaa acattatttg cattagaagc aattttaatt
    19261 tttgaaattt tagctcccat ttttttagca taaaaagccc ccaaagcatt accaaaattc
    19321 ccactaggaa taatgatttg cacttcttct aaaaactcat taaaaagttt taaactcgca
    19381 taataatgat aaataatctg aaacaaaata cgtccgaaat tcacagaatt agccgcacaa
    19441 agctcataat ttaaagcctt aatttcatct tgaaaatctt tagaaaaaag caactctttt
    19501 aaagtgcgtt gtgccgcatc aaaatcctca tctatggcaa aaacttttaa attatcctta
    19561 tctaaagctc gcatttgcag ttcttgtacc cgacttgtac ctccttttgg atacatgcaa
    19621 accactttaa cattttttgc attttcaaag ctttttaaag tcgcaggtcc tgtatcgcca
    19681 cttgtagcac aaataattaa aatgttttta tcccttgaaa actcgcttaa aagcacccca
    19741 aaaggttgca aagccatatc cttaaaagcc cttgtaggtc catgccaaag ttcattgata
    19801 taagtttttt cagcaatttt ttgcaaagaa atgggtgtat ttttattatc aaaactttca
    19861 taacttttca aagctttttt aaaaagctct tcttcgccaa aatcaaaact ttctataagt
    19921 tttaaagcaa aatctttata aggcaaatta gcatatttct ctcctttaaa aataggcaat
    19981 tttaaaggag aataaagccc accttcaggg gcatttgggt tgattaaagc ttctttaaaa
    20041 cttgatacat tatttatatt tctactctcg actaatttca tttactcaaa ctccttgata
    20101 taagttttta ttttttctct taatgagtct tttaattcta tatttaattc tataatttga
    20161 catttaaaac caaagtcttt gactttaaca aaatccttaa aagtaagcat taatgtatca
    20221 caattatgtt tttttagtaa attttttaac tcttcttttt taaactcata atgatcttta
    20281 aaaaaataac aagccctcgc tttgataaaa tgctcataca atctaaaagg tttggcaata
    20341 gcagttacta aaacagcttt tggattttct ttcacaaaag aataacgcac aaaatctctg
    20401 ccctctaatg caataaaatc agcttttctt tcataaaatt ttggtaaacg ataagccccg
    20461 cttggcaaag taaaagtaaa ataaggtttt attttacttt caagtaaaat atcaaatttt
    20521 tcaatatgaa atttagaaaa agcatcatca agcacaacga ttttagctcc taattcaaag
    20581 gctttttcaa taccttttac cctatcttcg cttacaatca cacctttgat atttttttca
    20641 aaagcgtatt ccatagcttc atcgccactt tgagatagcg tgcataaaat tcccttttga
    20701 tttttaacaa caaataaacc tttggatttt cttttataac ccctaagcac tataaaaact
    20761 ccatcaaatt ctcttgctat agctttacaa agcggggttt ttccattacc accaaagctt
    20821 aaatttccta cactaataat aggtttttta aaatccactt ttttgcgaaa aaaggtattt
    20881 aaaattgcaa aaaaagcata aagcacactt aaaggtaaaa ggataaaagc aaggcatttt
    20941 tgccaaaaat taggcttaaa aaaataatta tctaaccaaa gcatgtagtt ttttcttcgc
    21001 tcattattta aaattccaaa atttcaggca tttttctttt aaaagcattt ttttgtattc
    21061 tattttttag catagcaatt aaagaaatat caagtgtttt taaaagcttt tcatcattat
    21121 tttctaaagc ttttaaacct tcatcaattt ttgcataagt aaaacctaaa tccgcttcat
    21181 cgctttgatt ttcccaaaga tccgcacttg gagctttttt aataaaattt tcatataagt
    21241 taagatgttt tgctaaggta taaatttcac ttttataaag ctctcctata ggattaaaag
    21301 cgcaagctaa atccccataa atcgtaccat aacctaaaag caattcgctt ttattggaag
    21361 tacctacgac caaagaattt ttcaaagcag aataatcata aagcaaactc attctaatac
    21421 gagctgcaaa atttcctatg gcaatttgcg tgatactttc actttgtctt aaaaaagcat
    21481 ctaaaatgct ttgaatttct atgattttat actcaagttc taagtcctta caaagcctta
    21541 gagcgtcttc aagattagct ttatttgaaa tttgagtcgg cattaaaaga gcaaaaacat
    21601 ttttttttaa agctctttta caaagcgttg ctaccaaagc agaatcaatc ccaccactaa
    21661 gtcctaaaac cacaccttga gtttgagaac tttttacttt ttcttttata aaatcgcata
    21721 ttttttctgt aatcttttgc caatccataa agcttacctt ttaaaaaatt aatgtataat
    21781 tatatttatt taaagcaaat ttttaattta aagaggctaa aaatgcgaat cattaaacaa
    21841 gcttgtggaa tttatgaaac caattgttat attttattta cagaaaaagg cgagtttatc
    21901 atcgatccag gaattgatgc gcttttattt atcaaacaac atgtcaaaaa tcccttagcg
    21961 attttaaata ctcatgggca ttatgatcat atctgggata atgctaaagt taaaaaagaa
    22021 tacaatatcc ctatttatat tcacaaaaac gatgctttta tgctgcatga tgattttaac
    22081 aaaggctatg attctagtga tgcagatttt ttagtagata atgaagatat tttaaatatt
    22141 tgtggcgttg attttaaatt tcattttcta ccaggacata caccaggttg cactatgata
    22201 gaaattatag gtaaaaatat tatgtttagc ggagattttt tattttatag aaacataggc
    22261 agatgggatt ttccttattc tgatgcaaat ttaatgaaac aaagcctaga aaaaatcatg
    22321 acttataaag aagattttag acttttacca ggacacggac aagaaactac cttaaaagag
    22381 gagcaaattc atttgccttc ttggcttaaa tatttctaaa ggtatgctaa aatggattta
    22441 gatcaaattt tattatatgc ttttattttt ttaaatcttt ttgcactttt aggtttattt
    22501 ttaggaaata aaaagaaaaa tcaatttaac aacaaaaaat tttataaaat ctgtccatgt
    22561 aaaaaaatgg cagaaaatgg atctttaagt acaatttgta tttattcagc cgtgggagga
    22621 tttttttata gcgtattgtc tataggtttt atagggtttg gtaatttaac tttaaatttt
    22681 atttttttac ttgcagtatt aagcgttttt ttaggatgga aattaaaact tgattaaaaa
    22741 tcattctgaa gaaaaatcta ttgatttttc ttaattttta tttaaatgta gttccaccat
    22801 caacgataaa agtatggcct gtcacccaac ttgctttatt tgaacaaaga aaaagacaag
    22861 ctccggctaa atcttcaggc tgtcccatac gatttaaagg acttaaattg atagtagctt
    22921 gcttaacctc ttcataattt gtaaaagctc ttaaagcatc agtttcaata ggcccaccac
    22981 ttactacatt cacgcggata tttttttctc caagttcagt agctgcatat cttgccatag
    23041 cttctactgc agcttttgct gttccatgtc ctgaataatt ttctatataa accaaatttc
    23101 ctgtagacga tatagaaata atacttccgc cccctacttt ttccattctt ttagccgctt
    23161 cttgggcacc tacaacaaag gcatttaccg tagctgtaaa gatattgtta attccctttg
    23221 gctttagttt cataaattta gtgtaaccac ctacaactgc acgccccgaa ataattgcat
    23281 ttgagataaa ataatctact ctatcaaaat ctgcgtcgat tttttcaaaa aattctttat
    23341 aagtttcagg ctctaagata ttaaactcat aggctctagc tttaatttta taatttttct
    23401 ccaaatcttg caccatttca tcggcaattt gtgcattgga attataagta aaagctatgt
    23461 ttacgcctac tttagcaaat tcatagacta tggctttacc tatcccacga gttccgccac
    23521 taattactaa agtttttcct tgaaattctg tattcattaa aatcctttaa tcttatattt
    23581 tttcatcact tcttcaattt tagcaaaatt ttccttactt ggaggacaaa gaggaagtct
    23641 aaaatccaaa ctttctatca atccagctat atacatagcg gttttgatag gtataggatt
    23701 gctttcgcaa aataaaattt tattgatatt ataaagctca tcattgattt tcttagcttc
    23761 tttgtaattt tcatctaaag caaaatgagt taaagtacta attatatcag gcaataaatt
    23821 tgaagttact gaaatcactc cctttccacc atttgaaagt ataggataat tgatcgcatc
    23881 ttcccctgaa ataagcatca ttctaggctc atgggcaagc aaatccacac acttgtcaat
    23941 attcccgctc gcctctttta ctccataaat attttcacaa tctctaaaaa gcttgatgat
    24001 agtatcagtt gaaatttcac aacctgttct tcctggaaca ttatataaaa gcacgggaat
    24061 atccacgctt tgtgcaatag ccttataatg ttcataaagt ccttgttgtg taggcttatt
    24121 ataatatggc gccacgctta aaattccatc agctccgtgc tctttggcaa atttggctaa
    24181 atccactgcc tcatgggttg cattacttcc tgcgcctgct aaaaccttaa ccttagttcc
    24241 tttacaagtc tcaacagcta tttctatgca agttttgtgc tcttcatggg ttaaagttgc
    24301 actctcccct gtcgttccta caggaactac agcgtctatg ccattttcta tttgtctttt
    24361 gattaatctt gcataacttt gctcatcaac ttttctattt ttaaatggcg taatgagtgc
    24421 tgtcattgcc ccaataatga tacttttatc catttaaatc ctttcttaaa attaccgtag
    24481 ttgaattttc ttgaataaaa tattttttag cacaagaaat caaatctttt aattccaaat
    24541 tttgtatatc tttttcataa tttaataaag gattaatatc tcctcttgct aaatacgaac
    24601 cgtaaatatt tgctactgcg ctagcattat taagtgaaaa aataaaatca ctcttgacgt
    24661 tgttttttac tctttgcaaa tctttttgag aaattttacc cattttaaat ttatcaatga
    24721 tttttaaaag ctctttttct actctttttg catcaatatt aggattgcaa ttgcaaataa
    24781 aaataaataa attctcatct atgcaatcat taacataagc ataataatca ttgattaaat
    24841 ttaatttatc aatcaaaatt tcattcatta aagaactttt tccactccct aaaagctcag
    24901 ctaaagcatt taaagcaggt atatctttgt gcttaaaatt tgggatttta taagcaagag
    24961 ccaaaagttc agtgtctgaa tttttgtgca aatatattct ttttgcacca tcttgcttag
    25021 gctcttttgt atgaatttta ggtatagcct tgatattttt aattttttca aaatgttttt
    25081 ttgaaagctc aaaaacttct ttattttcta tatcgccact tacaagcaaa atagcatttt
    25141 taggttgata ataaatacta tgaaattctt taatatcttc aatactccaa ttttctatat
    25201 ctttaaaaaa acctattgga gtccaatgat aaggatgata cataaaagca tgattaaaaa
    25261 gtctaaaata caaaaaaccc aaaggattat tatctgttct ccatctacgc tcttctaaaa
    25321 ccaccgctct ttcgggctga aattcctcat cttttaaatt taaatttgcc ataagttcgg
    25381 caaaaagctc caaggcttta tctaaatttt tcttcgcaca tttaatataa taatgcgtat
    25441 agtcaaaacc tgtacttgca ttatctactc caccaaaacc tttaacaatc tcatcaaatt
    25501 cacccgcttt taaattttta gtgcttttaa aatttaaatg ctccaacata tgagctatgc
    25561 cactttttcc catgatttca tttcttgaac ccactttata aaaaatatca acgctaatta
    25621 catcactatt tttatttaca ggcaaagcat aaacttcaag tttatttttt aattgaattt
    25681 tttcataatt gatcatttta aatttactcc aatagcttca ctaatatgca aaaagccatc
    25741 tttttttaaa agctctataa gattttggtt gatatttttc accaaagaag gacctttaaa
    25801 aatcaaagct gtataaactt gcactaaatt agctccgttt ttaatgcgtt cataggcaat
    25861 atcagcacta tcaactcctc cacttgcaat aagcaaggtt tttccaaaaa aaaccttagc
    25921 cacttcttta aagaaaattc cacttttttc tgtaataagc tttccactaa taccgccaaa
    25981 agtacggttg ttgtctaata aagtataatc aacacttgta ttggctaata taaatccatt
    26041 tgcgcctttt ttaatagcat tttcacataa ttttaaagca tcatctattt tcatatcagg
    26101 agcaattttt accaaaatag ttttagaagt gatttttttt gcttcttcaa gtaaggtgct
    26161 taaaaaatca tcattttgta attcccttaa atttttggtg ttgggagatg aaatattgac
    26221 gataaaataa tcacataaat ctttaaaatc tctaaataaa gtaaaataat cctctaaagc
    26281 tttatcattt ggagtgattt tatttttccc tatatttacc cctaaaggca aaacaaaagg
    26341 atagattttt gcaagtctta aagcgatctt ttcagcacct tcattgttaa aacccatagc
    26401 attttgtata ctttcttgct ctacaagtct aaataagcgt ggtttttcat taccttcttg
    26461 aggctttgga gtaaaagttc ccacctctaa aaaaccaaat cctaaagcac tcaaaggtct
    26521 tatcatggta gcgtttttat caaaacctcc tgctaaacct ataggattgt taaaatcaag
    26581 tccaagcaaa ttttgtctta aactttcatc atcaactata tatttatgcg ctaaaaagct
    26641 taaaatccca ggaaaactag cgtttaaagc tcttaagtta tactcaacca aagcatgggc
    26701 atgctcagga tctaacttaa aaagtaaagg tttcatcatt tcataagcca ttttttaatc
    26761 ctttttaaaa ttctaactaa aattaactaa agctaggctt tgttttttct ttgcttttaa
    26821 atttttgata caaagcacaa gtttgtaaaa gctcttcatc tctgcctatt gccaatacct
    26881 ttcccttatc caataccact attttatctg cattttctat agtgcctaaa cgatgtgcaa
    26941 ctactaaaat caatctatct ttttttaaat tttctatagt tttaactatc gctttttcac
    27001 tttcgttatc taatgctgaa gttgcttcat caaaaataag tacatcagga tttttatata
    27061 aagccctggc aatagctatt ctttgttttt gtcctccgct taaattcttg ccatgttctt
    27121 ttacttcaac ccaaatccca cccatttctt taacaaattc ataagcattg gctaatttta
    27181 aaacttgttt gattttttct tcttctaact cttcactata agcaatattc gcagcaaaac
    27241 tatcattaaa aagataaata ttttgcgtta caagccctat tttagcgtgt aaactttcta
    27301 tagtaaaagt gctaatatct tcttgattga gtaaaatttt acctttttgc ttttcataaa
    27361 aatacattaa aaggttgata atagaagatt ttccacctcc acttgttcct acaagagcaa
    27421 gcatttgccc cttaacaaaa tcgaaattta caccctttaa gacgctttta tatggatttt
    27481 cataagcaaa ttcaacattt tcaaagctaa ttttttcaat gctttttaat tctttatttc
    27541 cgcctttaat ttgaggtttt aaatccaata aataaaaagt tctttcactc gctgcaacag
    27601 caccttgaag ctttccatat aaagaagaaa ggcgttttaa aggagtatat atggcaaaaa
    27661 gtgctgaaac aaaactgata aaacttccca cactcataga accattaata acttctctac
    27721 cccctactat aatcaccaca gcaaccccaa cagaacccat catatccatc aaagggcttg
    27781 taagtgcatc gatgcgcgca gatttgagat ttaatttaca taaagtgtca ttgtgcttag
    27841 caaatttatc actttctttt ttttcattat cattagcttt aatcagctca atatttgaaa
    27901 aaatttcacc taaataagaa agcaagtctg aatttgtctc ttgtatattt cttgcatatt
    27961 ttttaagttt tctagcaaac cacactaaag gaaaaatagc caaaggtaaa attaccaaag
    28021 caaaaaaagc caaggtagga ctttgatata ataccaccaa aagcaatcct atagcagtta
    28081 aaagctctct aaaaaaatca ggaataatac ttgatactat gctttgaagt gcattaatat
    28141 cattagtaca acgacttaca agctctccac ttctataacg cttaaaaaaa tccatatcca
    28201 agtgtaaaac attttttaaa actctagcac gcaatactct taacatatct gttcctataa
    28261 aagaaacata aaaactttgc aaataagtcc caagattttt taaaaaatac atcaatacaa
    28321 gcaaaaaagg tactgtataa agcaaagctt catttttttc aacaaaaata taatttaaaa
    28381 taggttctaa agcataaaaa cttccagcag ttcctccact tgccaaaatc ataccaaaaa
    28441 tagctatagc aaattgtttc caataccttt tataaaaggg tttaaagcgt attaaaacct
    28501 cttttaaatt catttcattg tgcattcatt ttctcccaaa tcgttccatt tggcgtatct
    28561 aaaagaatga tttttttact acttagctgt tctcttattg catcagctgt gctaaaatct
    28621 ttattttttt tagcctcagt tctttctaag attaatcctt caatctcttc ttgttcttct
    28681 ttgcttacac cccattgaaa atataaagtc gtatccataa aaccaaagcc aaaaatttta
    28741 gctaactcac ttaaagcttc tttgatattt tgttttaaaa atttattttt actttcttta
    28801 tccaattcta aatttgcatt actaataaaa tcatctaaaa gtgctaaagc tttagagata
    28861 tttaaatcat catttaaagc ctttaaaatt tgcttagcaa tttcactctt tatttcaata
    28921 ttatttaaaa catcaaaatc agaaatttca cttaattcca ctcttttttt aagacgataa
    28981 aatttatcca aacgcttttt agaattttct aaatccgata aagaataatt aaaatgagat
    29041 ctataatgag aacttaaaag ataaaatctc agagcctcac ccataaattc ttttaaagca
    29101 tcttttataa aaaaactatt atttaaactt ttactcattt tttcaccatc aatttttaca
    29161 aagccattat gaagccaaat atttgctaaa attcttttac atccgcaacg acattgcgca
    29221 gcttcatttt catgatgagg gaaaagcaag tctattcctc cagcatgtat atcaagtgta
    29281 ttttcaaaaa tagaatcaat catagcaacg cattcagtat gccaacctgg acgccccttt
    29341 ccaaattcgc tttcgtaaaa attttcatca aatttccaaa gcacaaaatc actttcattt
    29401 cttttttgca cttcattgct tagacgagaa atattttctt ctaaattacg atttgataag
    29461 cttaaatact tttcatcttt acttgtgtca aaataaattc catcttctaa agtataaaca
    29521 agctcaccct tggcaagctt tttaatcaaa tcaagcatag ctgctatata atgtgttgca
    29581 cgaggtttaa aatcaggatc taaaacattt aaagctttca tatcctcttc ataacttttg
    29641 atataaaatt ccgtaatttc ctctaaactt tgcccgcttt tagccatttt ctttaaaatc
    29701 ttatcatcaa tatctgtgta atttctagca aattttaccc tattaccatt agcaagtaaa
    29761 accctacgca aaagatcaaa acaaacacta cttcttgcat gtcctaaatg cgcatcatca
    29821 taaactgtag gcccacataa ataaatacta atatcttttt tatcaagttt tactttctct
    29881 tttattacgc tatctaacaa tctcattaaa aaactccttt aaaacttgta aaaattccta
    29941 taaaaaaact taaaatataa ggtttgatca aaacaagtaa aattgtaaaa acaatcaaag
    30001 caactataac taacaaacaa attttcatag atattaaagc aaaaaatttc ttaaaaccaa
    30061 attctttaat attggctcca agcaaataaa aagcactaat agaacttgaa agtgctactg
    30121 caataacttt taaactttca tctttaatta aaaatataaa agctatagaa cacaaagcac
    30181 taataattaa agattttact gcaatcaaag ctgctgtttt ttgtttaaat tttgcataaa
    30241 gccataaaga aaaaagtttt tgcaaaccaa aaggcaaaag ccctataaga taagcaatta
    30301 aaacataagc tgtaatcacg ctatcttcgt aagtaaaatt tcctctttca aataaaagtt
    30361 ttgaaatttc taaggcaaat actgaaccta taatactaga agtgataagc aaaatactta
    30421 aaaatattaa agctctttgc ataaatttta aagctaaatt ttcttgatcg ctttttaaat
    30481 gttttaaaat ttttggaaaa gaaacctgag ttaaggcgat agcaaaaagg gcaagaggaa
    30541 gttgaaaaac acgatttgca taataaagat aagaaatact cccactcatt aaaaagctag
    30601 ctatagttgt atcaagcaat gaactaaatt gcgttgcaga agaacccaaa actccatgaa
    30661 aaaaattact ataaaagtcc tgtaatttcg tcttgacctt tttaaatttt atacttaaaa
    30721 ccatagcgcg gattacaaga ttatttttta aaacaagtaa atgcaagata agctgtgcta
    30781 cgccacttaa aactattgca taagaaaaat aataaagcgt attttgcggt gcgtttttat
    30841 ctacaaaaaa agcagctata acaatgctta aattaaatag tgctgcagaa aaagaagtga
    30901 tgaaaaattt ttgtctataa tttaaaatag cccctaaaaa agttactaaa aaaataaaaa
    30961 ataaatacca aaaattaatc gccaccaaag gtgctgccaa agctatggta tctgcgttaa
    31021 atccaaaagc aaaaagttta gtaaaaaaag aagaaaaaaa acttaccaaa agacaaaata
    31081 aaaaaactat aagactaaat tgtatcatta cactaacaca aaaagctccc ttttttttcg
    31141 cttttacaaa attaggcaaa aaactttgtc caaaagcccc ttctgcaaaa atccttctaa
    31201 aaaaagcagg catttttaaa gccacaaaaa aaatatcgct ataaagccct gctcctaaaa
    31261 aaagcgctat taaaacatct ctagcaagcc ctaaaattct tgaaaacaaa attcctaaag
    31321 cattaataat aaaattttta aacaccaaac tcttcatt
//
LOCUS       DAPWAA010000013        30970 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.013, whole genome shotgun sequence.
ACCESSION   DAPWAA010000013 DAPWAA010000000
VERSION     DAPWAA010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 30970)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30970)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30970
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.013"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            24..229
                     /locus_tag="RTF91_000543"
                     /pseudo
     CDS             24..229
                     /locus_tag="RTF91_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344574.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
     gene            540..1331
                     /gene="rpsB"
                     /locus_tag="RTF91_000544"
     CDS             540..1331
                     /gene="rpsB"
                     /locus_tag="RTF91_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDZ4943460.1"
                     /translation="MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKT
                     LRYFRYTYNIVRDAAAEGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNF
                     GTIRQSIRKLEVIEKMEEDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIF
                     VIDTVKEKIAVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEA
                     INEGKALREQDGEALSNEEKEITDEEKKEVLDEVMSEEDFGEEQE"
     gene            1331..2404
                     /locus_tag="RTF91_000545"
     CDS             1331..2404
                     /locus_tag="RTF91_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDZ4943461.1"
                     /translation="MAEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREK
                     GLGKAAKKADRLAAEGLVSVKVNDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHI
                     QSNSLQSVEELHSSIINGVKFEEYLKSQIATIGENLVVRRFATLKVGANGVVNGYIHT
                     NGRVGVVIAATCDSAEVALKSRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALV
                     AELEKENEERRRLKDPNKPEHKIPQFASRKQLSDVILKEAEKKIKEELKAQGKPEKIW
                     DNIIPGKMNSFIADNSQLDSKLTLMGQFYVMDDKKTVEQVITEKEKELGGKIKIVEFI
                     CFEVGEGLEKKTEDFAAEVAAQL"
     gene            2417..3052
                     /locus_tag="RTF91_000546"
     CDS             2417..3052
                     /locus_tag="RTF91_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943462.1"
                     /translation="MELLRAENLNYSFDYPLFENLNLTLNTKDCVAIQGSSGCGKSTL
                     LHILSSLLIPKKGEVFFKGSSLYQMNENERLKIRRYDFGIIFQTHYLFKGFSALENIE
                     LASVLSGQNLDEKILKRLGIDMLLNQKIGKLSGGQQQRVSIARVLCKKPKIIFADEAT
                     GNLDFDNAKNVIELLISYVKENNAALFFVTHDSKLASFCDKIYTINVNGIC"
     gene            3039..3806
                     /gene="fliR"
                     /locus_tag="RTF91_000547"
     CDS             3039..3806
                     /gene="fliR"
                     /locus_tag="RTF91_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HDZ4943463.1"
                     /translation="MEFVNYLGDKNVVTFMLLLARMSGLIVFFPFFSHNSIPMVIKST
                     IVLFLTMYLYPLARLESLHLDSFFVLQLISEVIFGMIAGLMLQIIFAIIMMAGEQIAF
                     TMGFTMASILDPNSGTSMPITSQILNLLALMFFLAFDGHHLMLLFLSHSLGYISLGGF
                     YPHENLMHYLNMGMFNIFIIGFTMSFPILGISLLADVIFGLLMKTMPQFNLLVIGYPI
                     KIALGFVVLVAILLVMMQYFKNLVLELFAHMQTLFFF"
     gene            3863..5179
                     /locus_tag="RTF91_000548"
     CDS             3863..5179
                     /locus_tag="RTF91_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943464.1"
                     /translation="MKILLLNENPVVSRLISLSAKKMSYDFEELNAYNENLGYYDVIV
                     VDSDTPVPLKILKEKCERLIFLAPRNQNIDIDAQILQKPFLPTDFLNLLNNKDANKHI
                     STELPMLGNDDNPYADISLNLDNLNLDDLPNENSLDVNSDGMEDLSFDDEAQDSHDAS
                     KTLDTQNLEDENLEQETTKEQTEEDVESDLDLSLDNSENEKEDLTQEHTALDTDPNLD
                     ELEDENSENLEDNKELQANISDFDDLPVVEEQEKEMDFDDLPEDAEFLGQVKDNEESE
                     EALEDFTPVVEEDIQDEIDDSISNLSTQDQIKEELAQLDELDYGIDGDNSSKVLEDFK
                     DKPILDDKELGIDEEKVVVPNLNISDFDALKESDIQKALGEEVLEKDEEFMSDTTKND
                     NNEGIVNELSQSIAGAITSSIKDDTLKAALKGMNMNININISFKED"
     gene            5182..5799
                     /gene="gmk"
                     /locus_tag="RTF91_000549"
     CDS             5182..5799
                     /gene="gmk"
                     /locus_tag="RTF91_000549"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDZ4943465.1"
                     /translation="MKGFVLLISGPSGVGKSTLLKKLFDEFEDEVYFSISSTTRKPRE
                     GEKNGIHYHFISHKEFQKGIDSDHFLEWARVHENFYGTSLKHTQDALDNGKIVVFDID
                     VQGFKIVRQKMADKIVSVFITTKNKDELKKRLIKRNTDTIIQLEKRLQNASDEMKELS
                     EYDYLIINDDLKQSYEALRAILIAYKFRIKGQNLEQIQIIWNEGE"
     gene            5801..6040
                     /locus_tag="RTF91_000550"
     CDS             5801..6040
                     /locus_tag="RTF91_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HDZ4943466.1"
                     /translation="MGGWTSPSHWLIILLIVVLLFGAKKIPELAKGLGKGIKTFKDEM
                     SNDDEVAKNTQKIEEKQNTTNNTNADANIDETKKA"
     gene            6053..7645
                     /locus_tag="RTF91_000551"
     CDS             6053..7645
                     /locus_tag="RTF91_000551"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDZ4943467.1"
                     /translation="MKSIIFNEIKKVLECDFALENPKDKNLAHFATPLAFSLAKELKK
                     SPMLIANDLANKFQNHDCFEVVEAVNGYLNFRISKTFLNELANKALINPNDFTKGEKK
                     QESFLLEYVSANPTGPLHIGHARSAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLL
                     GLSILLSVKENILSENVEYPDQYYKGEYIADLAKEAFEKFGKEFFSENNIPSLADWAK
                     DKMLVLIKQNLEQVKIKIDTYASERSYYDTLNATLKSLKEHKGIYEQEGKIWLASSQK
                     GDEKDRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMGFL
                     GFNPDNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCD
                     THLEFDISDLQKEDSSNPVYYINYAHARIHQIFVKAGKKIDDVIGADLQSLNQDGVNL
                     LFEALNLKAILNDAFEARALQKIPDYLKNLAANFHKFYNENKVVGSANEDDLLKLFSL
                     VALSVKTAFSLMGIEAKNKMEH"
     gene            complement(7667..7975)
                     /locus_tag="RTF91_000552"
     CDS             complement(7667..7975)
                     /locus_tag="RTF91_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDZ4943468.1"
                     /translation="MYIFIIILSALLDIIANLLLKKSDGFKHKIWGLAAIINTILAFF
                     LLSFSLKYVPLSIAYSTWGAIGIIGTCLGGWILYKEKLNKLGILGIVIVIIAVFLLNY
                     "
     gene            complement(7975..8316)
                     /locus_tag="RTF91_000553"
     CDS             complement(7975..8316)
                     /locus_tag="RTF91_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDZ4943469.1"
                     /translation="MNIAKKELFTAWFFLIAAIVFEVLGTSFLKMENQFLGYIFMALF
                     IAFSYFFMGKAIKKIQVGIAYAVWELLGIILILLVSFIVFKESLTLTQILGIILSIVG
                     IIMINMGEVKE"
     gene            8425..9132
                     /locus_tag="RTF91_000554"
     CDS             8425..9132
                     /locus_tag="RTF91_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDZ4943470.1"
                     /translation="MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMN
                     PKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDN
                     PTRTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEGLELDLIDSGLEE
                     LEQNEEELVISGDYTAFGELSSVIEAKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLL
                     DKLEDDDDVQAVYTNID"
     gene            9142..9624
                     /locus_tag="RTF91_000555"
     CDS             9142..9624
                     /locus_tag="RTF91_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDZ4943471.1"
                     /translation="MIKTIDTSKVNEYKFALIETEKGTMKLELFGDEAPQTVCNFATL
                     ANEGFYKDLNFHRVIPNFVIQGGCPHGNGIGGPGYEIICECDDQEHKHQRGTLSMAHA
                     GRDTGGSQFFICHSPQPHLDGVHTVFGQIDPKDEKSLEVLDSIRQGDKILNIKICDKI
                     "
     gene            9783..11195
                     /locus_tag="RTF91_000556"
     CDS             9783..11195
                     /locus_tag="RTF91_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3373 family protein"
                     /protein_id="HDZ4943472.1"
                     /translation="MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAEI
                     RKEREAQAKQNEAVKAELADLSDRADETEFQAALSKVKFGLEFSTAVSNTNYKISGQD
                     YSANNKWINELHLNMNADINDKTKFYGRLSMAKNWSQMGWSGSPLDLDAGRNTRTSGP
                     VLYVDRAYLDYYITPEWIATIGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVI
                     TYKPESLQDHKVAIRAAYGKTYQWDEEGKVRDWMSDQKDADANLYYAAVEGELPIEGM
                     GDNLLIFNVAHMTDFALPLPSISIGQQVLLNQGVYNLGDLTLANIHFENYKAFGTNFN
                     WFASLGYSNGANAHTLSAIPIVQSQLEFNEKDGYAVHVGGRYDFTKALKVGYEFFWGS
                     RYWYTMSRPSINDPLNIRMTRGTAHDIYVIYQLDRYQFLRLSYTNIQNKWGNRGLPFG
                     GSKKDKARADNIMLMYNVKF"
     gene            11206..11433
                     /locus_tag="RTF91_000557"
     CDS             11206..11433
                     /locus_tag="RTF91_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943473.1"
                     /translation="MKKILFASLLPIIALADCASLMAKYEAPEPESKTMKQVERWISK
                     KVSDPADAAVLKECMIARAADNPNQVSVAGK"
     gene            11512..12114
                     /locus_tag="RTF91_000558"
     CDS             11512..12114
                     /locus_tag="RTF91_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDZ4943474.1"
                     /translation="MQQIISFILEMASVWGYLGIIVLMTLESCFIPFPSEIVMIPTGY
                     LAHKGELDITLCILSGTLGSVLGALINYYICFFWGKQFVLKWGKYFGINETKFAKFEE
                     FFNKHGEFSTFTCRLLPGIRQYISMPAGLVKMKLINFILFTAFGSTIWVAILVFLGYH
                     IGQNEELIKTYLTQILIVIIVFVILASLIYIKIKKPFKKA"
     gene            12420..13196
                     /locus_tag="RTF91_000559"
     CDS             12420..13196
                     /locus_tag="RTF91_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HDZ4943475.1"
                     /translation="MEKPDIQRLTNFLIVYTKTLLGAGTYTARVAKCVGRIAEVYGYE
                     ININFFFHHITLNVVDMDDNSIQRTYVIPNRHAYINFKLIFDLSALSWVIYDHKYDLE
                     KAKVVFDQISQQKKHSYLLNLLFVSVANSAFCRLFGGDFGAGNLVFFATFVGLLLRYI
                     LTKAKIDLRIQYILCSFVSSWLVFLGIDMGYTNTSDVALGSSILYLIPGVFFINSVID
                     ILKDHILMGLSRIISVAILICCIALGIYMTLSISDFGILR"
     gene            13193..13687
                     /locus_tag="RTF91_000560"
     CDS             13193..13687
                     /locus_tag="RTF91_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDZ4943476.1"
                     /translation="MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSALLAAIAHGLR
                     FTLIEYFYFETLAIATFVASFCIGCLGIALAKIIKIPAEIIAFPALIPMIPGIYAYKA
                     ILYLISFIRSDDLKAKSEFLVQFFDYFFTTVSVTLALAIGVSVTLLIFFEQSFMMTRH
                     TKKH"
     gene            13709..13903
                     /locus_tag="RTF91_000561"
     CDS             13709..13903
                     /locus_tag="RTF91_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004275760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HDZ4943477.1"
                     /translation="MFFYNFKSNCSVDLVVSDKSGVEIDYCPKCHNIWFDHRELDKII
                     EHSIFNSGNFHQISRQDIMT"
     gene            14040..14990
                     /gene="czcD"
                     /locus_tag="RTF91_000562"
     CDS             14040..14990
                     /gene="czcD"
                     /locus_tag="RTF91_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter CzcD"
                     /protein_id="HDZ4943478.1"
                     /translation="MYKFLSHEPLANKSYHHNHEEHSHEHHHSHADARSMDKKILKIS
                     LLMTFSMMLVQFIYSILSNSLALLSDTLHMFSDVFALALSFLAIIAVEKWQDHQKTFG
                     YFRLEVLVAFINALTIILSALFIIYEAIEKFINPQEIDAKTMIIVAILGFLVNGINAL
                     MMFKGANLENVNMKSAFLHMMSDLLGSLAVIIGGLAVYFSGIVYIDTIIAIILSILLL
                     RWAVILLKQSANILLESSPVDIEKVKQVLLLEPSVDEVVDLHITQITNKMLVASMHLK
                     VRICDLKEFEKLSQDLSHKLLHEFEIGHITIQPIRSENEI"
     gene            14980..15174
                     /locus_tag="RTF91_000563"
     CDS             14980..15174
                     /locus_tag="RTF91_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDZ4943479.1"
                     /translation="MKFKVKNVNCMSCVNLIKNSLEDEFGSIEVDLEHKILSLNLEES
                     QVSNFIKEFQDLGFEIVERL"
     gene            15174..17273
                     /locus_tag="RTF91_000564"
     CDS             15174..17273
                     /locus_tag="RTF91_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HDZ4943480.1"
                     /translation="MEELRIKIGKMTCVNCSNAIERACKKINGVKDASVSYVNSSGVF
                     LLEDQEKHKDIIAKIQDLGFEILEDEQSLIAYKAKKHLELRKNLLLSIVLSVVIMYFE
                     MFVKSSFSQNIQMTLSFFGIFYCGREFFTHAFLGLKSKNLDMNTLIALGTLSAFIYSF
                     FVYLQVFKEEHLYFSGAMMIISFVLLGKYLESKAKFKAQDYQRILENIDTKKTKILLK
                     DETVKEISSSFVKSGDVLLVKEGESIVADGVVLLGSAELDMSFLNGEFLPILKKEGDE
                     VQAGSVVLNGALRIKASKKAMDSTLEQIKNLVFEAGNIKSPLANLADQISKYFVGGII
                     FFAFLVFVFWMAKVDANTAFLHACAVLLISCPCALGLATPIALVVASSNAAKNFILIK
                     NPAALEKLALVQYAFFDKTGTLTKENLSIFKHNLSKDDFDKLCQIESLSSHPIARALH
                     QDQIFDLKGKGRVIVGSGINYKEDNDIYFVGNAQFLHENKIDTKETDIFFDAFKGYVR
                     VYFAKNGKCLGGVLLSNVLKEGAKELILDLKKQNFKTFILSGDHVKNVEKIAKELQVD
                     EFYAQLKSEEKLQMIQKFEKTLFVGDGVNDAAALSAASVSMSFSKANELAKKIGDFIL
                     IKDDLSAIFKCFKLAKKTRSIIKLNLFWAFIYNVLCIPIAAGFVPFINLSPHIAALAM
                     CFSSITVVLNSLRLRKI"
     gene            complement(17270..19171)
                     /locus_tag="RTF91_000565"
     CDS             complement(17270..19171)
                     /locus_tag="RTF91_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HDZ4943481.1"
                     /translation="MQRRDFLNGMALAVVAGMTPLQLLYGKDSKIEDFTKEYYPPNLL
                     GLRGSNNKSYEYAHMLRDGDKFDFSSVKPKENYDLVVVGAGISGLAAACFYQERFGKN
                     KKILILDNHDDFGGHARRNEIQLDGDTILSYGGSESFQSPKALYSEEVIKLLNSLGVS
                     IDELAKRFDVNFYPDLKLSRGVYFSKENFGIDKVVNGNPRKIICDDIPVSKNNGKSIE
                     NFIKDFPMNSKDKKDLIALFKSDKDYLKGLSKEEKEEYIAKTSYKKFLEDKVKLSKKA
                     ITFFEGMTDDFLALGIDATSCEDARISFLPGFDKLGLDPIEGEALAEMEEPYIYHCAD
                     GNATVARLMVRKLIPAVSQKGKDMDDITLAHFDYSKLDDSNNKVRLRLNSTVIHVENT
                     KNGALISYINQGKKYRIKAKNVVMANYNSMIPYIIPSLPEEQKEALSKNVKTSLLHTK
                     VIINNWEPFIKLGVHEIYSPKMPYARTKLDYPVDMGGYHHPRDPKKPICVHMVCSPLA
                     LANIQGIDLEGLDARDRARVGRNLLFAMSFEEHEKIIREQLQGMLGSAGFNHEKDILA
                     IVVNRWGHCYSYTENSLYDDPKIAEQIRLTARKPFGNIVIANSDSDWSAYMHSAIDQA
                     YRAINEIKA"
     gene            complement(19251..20786)
                     /locus_tag="RTF91_000566"
     CDS             complement(19251..20786)
                     /locus_tag="RTF91_000566"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDZ4943482.1"
                     /translation="MLQALAIKYRPKTFDELIGQKTVSVSLKYALNHNRLAHAYLFSG
                     LRGSGKTSSARIFSRALVCEQGPSDTPCGICKHCLAALEGKHIDIIEMDAASNRGLED
                     IQTLIEQTKYTPSMARFKIFIIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLK
                     LPATVLSRTQHFRFKQIPQSEILNHLKEILLKENVKFEEEALKFIARSGNGSLRDTLT
                     LLDQAIIFCQNEISISKITDMLGFLDPEKIKAFYQAILTKDKEKVFAYLEELQDYEAS
                     SVIDEMLFYLKESFFAKSTEFSILMYERFFRILSKAKNMLCDDDGFTLCVMAFMMMEA
                     SHLKEIDVQIQEIKQENITNITPKITLSPIMPDLEKKIEKNPYEVLLDSIYDRNFDLG
                     ECFKQSTKFISFENNTLNISSNAQGQNRDILNKGFKLIQELFKAKFGKNAKINVQKVL
                     AIDENKLQSLTQELPSNENKNIDIQSSINILKEGAKKFDPQEDLKEALKDCFGNPQIQ
                     NID"
     gene            complement(20790..22088)
                     /gene="rho"
                     /locus_tag="RTF91_000567"
     CDS             complement(20790..22088)
                     /gene="rho"
                     /locus_tag="RTF91_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDZ4943483.1"
                     /translation="MEKEKKQHQRTHIPVEGYKIEELKLLDLENLVKIANECEIENPR
                     EFRRQELIFEILKAQTKKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQ
                     IKKFALRVGDIVTGQVREPKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTE
                     KIKLEYDAIKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELATAIAKNHPEIHL
                     IVLLVDERPEEVTDMQRCVKGEVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVII
                     LLDSITRLARAYNTATPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATAL
                     IDTGSRMDDVIFEEFKGTGNSEIVLDRNIADRRIYPAINIIKSGTRKEELLQGVANLQ
                     KIWAIRSAISQMDDVEALKFLYSKMLKTKDNVELLSIMNE"
     gene            22197..24554
                     /locus_tag="RTF91_000568"
     CDS             22197..24554
                     /locus_tag="RTF91_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase
                     metal-binding domain-containing protein"
                     /protein_id="HDZ4943484.1"
                     /translation="MIMKCEHCRLDYKRAQMIEYKGKFFCCKGCESVWKILYESGLDE
                     FYEKLGNQTLSPVNFQNEMKNYDEFITKTKEGFSEIYLMIHGIECAACVWLNEKILTK
                     QEGILELDINHLSHKARIVFDEQSVSLVQILRLIESIGYKASAYDANKASKKADLLKR
                     EFYSKLVVAIACVMNIMWIAVAKYAGFFSGMDKDTKDILNFAEFILCSPVLFYTGSHF
                     YKSAFKTLKMHSLNMDVLVISGASLAYIYSLWAMFFRVGEVYFDSVAMIICFVFIGKY
                     LEMFSKKRALDTIDGLNDFLQNEVLVFNGKEFIPKEVQKVCLGDRILLKTGDKILIDG
                     ICKSGEISVDTSSLNGENTPKLIQKEDEIFSACIVLDGSVEYEATKLYKDSKLSQIIQ
                     LLELASSKKAKLESLVNSLSAYFSRTVLLIAFICFSFWFFYKEASFEISLVNAIAVLI
                     IACPCALALATPVSNLVALGRALKKHILFKSSSVIEDLSKCDCVVFDKTGILTKIELE
                     LKEVFLDKSLNLNELYNFVKLSKHPISQNIALYLKKRGAKDLNLDFKKLSNIQAKGLS
                     AVLNEELFLGGSSKFLQENGILTKEFDNTHFIFAKEGKILAFFEFGSVLREGVKELID
                     YLKKEKKELMILSGDHQKAVEKIAKKLEIQNYQASCLPEDKMKAIENLSKNHKVLFVG
                     DGINDALALKYASVSMTLREGSDLAIESSDVLLLKNDLLSLKKAIKLSKNTFKIIKQN
                     LAFSLFYNACTIPLAFLGMINPLFAAISMSFSSIIVILNALRIKE"
     gene            24551..24757
                     /gene="ccoS"
                     /locus_tag="RTF91_000569"
     CDS             24551..24757
                     /gene="ccoS"
                     /locus_tag="RTF91_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HDZ4943485.1"
                     /translation="MNSIIMMMIGVSILVFFIILATLLWGIKNKQFDDDYKFTTLNDD
                     EDSLRDAIKLEKRKKEALDKKRLS"
     gene            complement(24781..25083)
                     /locus_tag="RTF91_000570"
     CDS             complement(24781..25083)
                     /locus_tag="RTF91_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDZ4943486.1"
                     /translation="MKKLLVVSALACLGVSAFAADGATLFKKCAVCHGANADKVYLNK
                     VPALKTLSSAQRLQYMKEYSEGKRNAYGQGAIMKLNVKGLTEEDFKAIDAHIETLK"
     gene            25208..25729
                     /locus_tag="RTF91_000571"
     CDS             25208..25729
                     /locus_tag="RTF91_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDZ4943487.1"
                     /translation="MKTKALFLDRDGVINIDKKYVYKIEDFEFCEGIFELCRYFLAKD
                     YLLFIATNQSGIARGYYKESDFFKLCDYMFEEFVKQNIRIDKIYHCPHLEGCECRKPK
                     AGMLLKAKDEFNIDMKNSIFIGDNLSDMQAGLNADIGTLILVNEEKKEDNFFRQFKNL
                     KEILSFFKQKENQ"
     gene            25726..26679
                     /gene="rfaD"
                     /locus_tag="RTF91_000572"
     CDS             25726..26679
                     /gene="rfaD"
                     /locus_tag="RTF91_000572"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HDZ4943488.1"
                     /translation="MKIVITGGAGFIGSQLALNLEEKHEILIIDKMRSSATFENGNLQ
                     SFGHFKNLLEFDGELFVGDINDEKVLEKIEDFKPEVIFHQAAISDTTVFDQTKVLQTN
                     LNTFKDFIELSIKLHAKLIYASSASVYGDAKSPQTVGKDEEPKNPYAFSKFMMDKLAK
                     KYYDKAHLVGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFT
                     YIKDVISANLIALDSKCGVYNVGSGKARTFQDIVDILQKELNTNLPCEYIPNPYVKSY
                     QFHTEAKLDQTWDYKPKFSLEEGIKDYLVEIKRIFEKEVNA"
     gene            26672..28057
                     /gene="rfaE1"
                     /locus_tag="RTF91_000573"
     CDS             26672..28057
                     /gene="rfaE1"
                     /locus_tag="RTF91_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HDZ4943489.1"
                     /translation="MLEFLSKQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLK
                     EDKRLGGAANVYVNLKSLGADVFALGVVGDDESGKFLKENLKGEFLIQKGRKTPFKNR
                     IMAHNQQVLRLDEEDTSAILLEDELISLFDERIKDFNAVVLSDYAKGILTPKVCKALI
                     KKANTLNIPILVDPKGSDFSKYSDATLLTPNKKEALEALKFKNLEGENLEKGIKKLKE
                     DFSLCYSVITLSEAGIALFDKSLKIAPAKALEVYDVTGAGDSVIAVLAFCLASGIEIF
                     KACELANEAAAVVVSKIGSVSVSFDEIKSFKRVDFEKKIKSKEELLALLKQNDKKIVF
                     TNGCFDIVHFGHIKYLEKAKRLGDILVIGLNSDASVKRLKGKNRPVNSEFQRACMLAA
                     FYFVDFVVIFDEDTPLELINFLKPDILVKGADYKDKLIVGLDLVSRVELIDFEEGFST
                     SKIIEKIKDKK"
     gene            28054..28614
                     /gene="gmhA"
                     /locus_tag="RTF91_000574"
     CDS             28054..28614
                     /gene="gmhA"
                     /locus_tag="RTF91_000574"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDZ4943490.1"
                     /translation="MINLVEKEWQEHQKITQASEILKGQIAKVGELLCECLKKGGKIL
                     ICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQV
                     EALGNKNDALVGISTSGKSPNVLEAFKKAKELNMLCLGLSGKGGGMMNKLCNYNLVVP
                     SNDTARIQEMHILIIHTLCQIIDEGF"
     gene            28615..29378
                     /locus_tag="RTF91_000575"
                     /pseudo
     CDS             28615..29378
                     /locus_tag="RTF91_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841669.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
     gene            complement(29364..30314)
                     /gene="waaF"
                     /locus_tag="RTF91_000576"
     CDS             complement(29364..30314)
                     /gene="waaF"
                     /locus_tag="RTF91_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HDZ4943491.1"
                     /translation="MKIFIHLPTWLGDAVMASPALYAIKEHFKDAKFILYGSFVSTAL
                     FKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSIAFRSALSSKIVLYILKTKQRYFF
                     NKNKHKEEHQVLKYLYFIENSLDIKAHCKDLKLPFKLKFQSPLILKNGKKILGLNPGA
                     SFGSAKRWDASYFAKVALNFSKTHEILIFGAGKAEQELCNEIFKILKEQNTKAKNFCN
                     KTTIKTLCQNIAFCDLFITNDSGPMHISAAYKVKTIAIFGPTKFTQTSPWQNENARLV
                     HLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEKAKNLLKF"
     gene            30373..>30970
                     /locus_tag="RTF91_000577"
     CDS             30373..>30970
                     /locus_tag="RTF91_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDZ4943492.1"
                     /translation="MPQLSIIIPLFNSCDFIPRALKSCINQALRDIEILVIDDKSQDN
                     SLSIALEFAKKDPRIKVFQNNENLGTFASRNRGVLHSSSDFVMFLDSDDFLALNACEI
                     VFDKIKQGFDLLCFDAFVHRIKTKQFYRFKQDEVFNQEQFLEFLSQQRHFCWSVWAKC
                     FRKDIILKSFEKIKIDERLSYAEDVLFCYINFMFCKKIA"
BASE COUNT        10671 a         3880 c         5551 g        10868 t
ORIGIN      
        1 acaaataatt aaatttattc tttataaaat gaaattatag agattttaga attgttttta
       61 aattttttat cagaaacaaa cctgctaaat tttattaata tttaaagaaa aaattccttg
      121 tttagaatta tttggcgata caagtttagt ttttgttata tgcaagtaaa acttgatata
      181 gaaggtgatc atgaaatata agatattgta tcatttttct aataaaaaac ttgatttatt
      241 taaagaaaag acttttagat atgtttggct ttctattatg gcagctcaaa tcgggattac
      301 tattttgaag agcagtgtaa aaacccaatt tattatgaaa gtaaaaatgg atttgtttta
      361 atttttaatc acaaaagaaa attaacaata atccaagccc cgccaagaat acatatataa
      421 gtaaaaacta aacttaaatt tgataaaatc ttagatccat ttcacacgca tcagtccttt
      481 ttagcttgtg taaattaagg gatgcggagg aataaagcta aatttataag gagagactca
      541 tggttagtat gagagatttg ctagaatgtg gtgtacattt tggacaccaa acaagacgct
      601 ggaatccaaa gatgaaaaaa ttcatttttg gtgagagaaa aggtatttat gtaattgatt
      661 tgcaaaaaac tttaagatat tttagatata cctataacat cgttcgtgac gctgctgctg
      721 aaggaaaaac aatacttttt gttggaacaa aaaaacaagc aggtggggcg attaaagaat
      781 acgctgaaaa atgtggtatg ccttatgtaa atcacagatg gcttggcggt atgatgacaa
      841 attttggaac aattcgccaa tcaattagaa aattagaagt aattgaaaaa atggaagaag
      901 atggaagtat taagctttta actaaaaaag aagctttaat gcttacaaga aaaaaagaaa
      961 aattattagc ttatcttggt ggaattcgtt atatgaaaac tcaacctgat atgatttttg
     1021 ttattgatac agtaaaagaa aaaattgctg ttcaagaagc aaatagatta agaattcctg
     1081 ttgtagctcc attagataca aactgtgatc ctgatttggt aacttatcct attccaggaa
     1141 acgatgatgc gattcgttca gtgcaacttt tctgccaaga aatggctgaa gcaattaacg
     1201 aaggaaaagc tttaagagag caagatggcg aagctttgtc aaatgaagaa aaagaaatca
     1261 ccgatgaaga aaaaaaagaa gttttagatg aggtgatgag cgaagaagac ttcggtgagg
     1321 agcaagaata atggctgaaa ttactgctgc aatggtaaaa gaactccgcg aaagtacagg
     1381 tgcggggatg atggattgta aaaatgcttt aagtgaaact aatggagatt ttgataaagc
     1441 ggtgcaactt ttaagagaaa aaggcttagg taaggctgct aaaaaagcag ataggcttgc
     1501 cgcagaaggt ttagtaagtg taaaagtaaa cgatgatttt acaagtgcaa ctgtaagtga
     1561 aattaactct gaaacagatt ttgtggcaaa aaatgatcaa tttattgctt taacaaaaga
     1621 cactacagct catattcaaa gcaatagttt acaaagcgta gaagaacttc actcaagtat
     1681 cattaatggt gtgaaatttg aagaatattt aaaaagtcaa attgcaacta taggggaaaa
     1741 cttagttgta agaagatttg caactttaaa agtgggagct aatggtgttg taaatggtta
     1801 tatccataca aatggtcgtg tgggtgttgt gattgctgca acttgtgata gtgctgaagt
     1861 ggctttaaaa tcaagagatt tattaagaca aatttgtatg catattgcag caatgagacc
     1921 aagttattta agctatgaag atttggatat gacttttgtt gaaaatgaat ataaagcttt
     1981 agttgctgaa cttgaaaaag aaaacgaaga aagacgcaga cttaaagatc caaataaacc
     2041 tgaacacaaa attcctcaat ttgcaagtcg caaacaatta agcgatgtaa ttttaaaaga
     2101 agctgaaaaa aaaatcaaag aagaacttaa agctcaaggt aaacctgaaa aaatttggga
     2161 taatattatt ccaggtaaaa tgaacagctt tatagcggat aattctcagc ttgatagtaa
     2221 gcttacccta atgggtcagt tttatgtaat ggatgataaa aaaactgtag aacaagtaat
     2281 cactgaaaaa gaaaaagaat tgggtggaaa aattaaaatt gttgaattta tttgtttcga
     2341 agttggtgaa ggtttagaaa agaaaactga agattttgcg gctgaagttg ctgcacaact
     2401 ttaaaaacgg ttgaaaatgg aacttttaag agcggagaat ttaaattata gttttgatta
     2461 tccgctcttt gagaatttaa atcttacttt aaatacaaaa gactgcgttg ctattcaagg
     2521 gagtagtggt tgtggtaaat ctactctttt acatatactt tcttctttat taattccaaa
     2581 aaagggtgaa gtttttttta agggttctag tctttatcag atgaatgaaa atgaaagact
     2641 taaaattcgt cgttatgatt ttggtattat ttttcagaca cattatcttt ttaaaggttt
     2701 ttcagcttta gaaaatatcg aacttgccag tgttttgtcg ggtcaaaatt tagatgagaa
     2761 aattttaaaa agattgggta ttgatatgct tttaaatcaa aaaataggaa aactcagtgg
     2821 tggacagcag cagcgtgtga gtattgcacg cgtactttgt aaaaaaccaa aaattatttt
     2881 tgctgatgaa gcaactggaa atttggattt tgataatgct aaaaatgtta tcgaactttt
     2941 gatttcctat gttaaagaaa ataacgcagc tttatttttt gtaactcatg atagcaagct
     3001 tgcaagtttt tgtgataaaa tttatactat aaacgtcaat ggaatttgtt aattatttag
     3061 gtgataaaaa tgttgtaact tttatgttac ttcttgctag aatgagtggt cttatagttt
     3121 tttttccttt tttttcacat aattctattc ctatggtgat aaaaagtact atagttttat
     3181 ttttaactat gtatttatat cctttagcta gattagaatc tttacattta gatagttttt
     3241 ttgttttgca gcttattagt gaagtgattt ttggaatgat agcaggatta atgcttcaaa
     3301 ttatttttgc tattattatg atggcgggtg agcaaatcgc ttttactatg ggctttacta
     3361 tggcaagtat actagatcca aactctggaa cgagtatgcc tattacatct caaattttaa
     3421 atttgcttgc tttgatgttt tttcttgctt ttgatggcca tcatttaatg cttttatttt
     3481 taagtcattc tttaggttat attagtttag gtggatttta tccacatgag aatttaatgc
     3541 attatttaaa tatgggtatg tttaatattt ttatcatagg ttttactatg agttttccta
     3601 tccttggaat ttcgctttta gctgatgtta tttttggact tttaatgaaa acaatgccac
     3661 aatttaatct tttggttatt ggttatccta taaaaatagc tttaggtttt gtagttttgg
     3721 tcgcgatttt attagtcatg atgcaatatt ttaaaaattt agttttagaa ctttttgctc
     3781 atatgcaaac tctttttttc ttctaaggaa aggataaatg aaattatcgt aaaatagcga
     3841 ttatttttta aggattagag tgatgaaaat tttactttta aatgaaaacc ctgtagtttc
     3901 aagacttata agccttagtg ctaaaaaaat gtcttatgat tttgaagagc ttaatgctta
     3961 taatgaaaat ttgggttatt atgatgtgat tgttgtagat agtgatactc cagtgccttt
     4021 aaaaattctt aaagaaaaat gtgaaagatt gatttttttg gctccacgta accaaaatat
     4081 agatatagat gcgcaaattt tacaaaaacc tttcttgcct acagattttt taaatttact
     4141 taacaataaa gatgccaaca aacatatatc tactgaattg ccgatgttgg gtaatgatga
     4201 taatccttat gctgatatta gtctaaattt agataatcta aatttagatg atttgcctaa
     4261 tgaaaattct ttagatgtaa attcagatgg aatggaagat ttgagttttg atgatgaagc
     4321 tcaagatagt catgatgcaa gcaaaacttt agatactcaa aatttagaag atgaaaattt
     4381 agaacaagaa acaactaaag aacaaaccga agaagatgtt gaaagtgatt tggatttaag
     4441 tctagacaat agtgaaaacg aaaaagaaga cttaactcaa gaacatacag ctttggatac
     4501 tgatcctaat ttagatgaat tagaggatga aaacagtgaa aatttagaag acaataaaga
     4561 actgcaagcc aatataagtg attttgatga tcttcctgta gttgaagaac aagaaaaaga
     4621 aatggatttt gatgatcttc ctgaagatgc tgaattttta ggtcaagtaa aagataatga
     4681 agaatcagag gaagctttag aggattttac tcctgttgtg gaagaagata ttcaagatga
     4741 aattgatgat tctatttcaa atttaagcac tcaagatcaa attaaagaag aattagctca
     4801 acttgatgaa cttgattatg gtatcgatgg tgataatagt agcaaggttt tagaagattt
     4861 taaagataag ccaattttag atgataaaga gttaggaata gatgaagaga aagtagttgt
     4921 gccaaattta aatataagtg attttgatgc attgaaagaa agtgatatac aaaaagctct
     4981 tggagaggaa gtcttagaaa aagatgaaga gtttatgagt gatacaacta aaaatgataa
     5041 taatgaaggg atagttaatg agcttagtca aagtatagca ggggcgatta cttcaagcat
     5101 taaagatgat accttaaagg ccgctcttaa aggtatgaat atgaatataa atataaatat
     5161 aagttttaaa gaggattaaa attgaaaggt tttgttttgt tgatttcagg ccctagtgga
     5221 gttggaaaat caactctttt aaaaaaactt tttgatgaat ttgaagatga ggtttatttt
     5281 tccatttctt caacaactcg caagccaaga gagggtgaaa aaaatggaat acattatcat
     5341 tttatctctc ataaagaatt tcaaaaaggc atagatagtg atcatttttt agaatgggct
     5401 agggtacatg aaaattttta cggcacttct ttaaaacaca ctcaagatgc tttagataat
     5461 ggaaaaatag ttgtttttga cattgatgta caaggattta aaatagtcag acaaaaaatg
     5521 gccgataaga ttgtttctgt ttttattact acaaaaaata aagatgaact aaaaaaaaga
     5581 cttattaagc gaaatactga tacaataata caactagaaa aaagattaca aaacgctagt
     5641 gatgaaatga aagagcttag tgagtatgat tatcttatca ttaatgatga tttaaaacaa
     5701 agttatgaag cattgcgagc gattttgatt gcctataaat ttagaattaa agggcaaaat
     5761 ctagagcaaa ttcaaattat ttggaatgaa ggagagtaaa atgggtggtt ggacaagtcc
     5821 aagtcattgg ttgattattt tattgattgt tgtattgctt tttggagcaa aaaaaattcc
     5881 agaacttgca aagggtttag gcaaaggtat taaaactttt aaagatgaaa tgagtaatga
     5941 tgatgaagta gcaaaaaata cccaaaaaat tgaagaaaaa caaaatacaa ctaacaatac
     6001 aaatgctgat gcaaatatag acgaaacgaa aaaagcttaa ggttttaatc ttttgaaaag
     6061 tattattttt aacgagatta agaaggtttt agagtgtgat tttgcacttg agaatccaaa
     6121 ggataaaaat ttagcacatt ttgccactcc tttggccttt tcattggcta aggaattaaa
     6181 aaaatctcct atgttgattg caaatgactt agcgaacaag tttcaaaatc acgattgttt
     6241 tgaggtagtt gaagccgtaa atgggtattt aaattttaga atttcaaaaa cttttttaaa
     6301 tgagcttgcg aacaaagctt taataaatcc aaatgatttt accaaaggag aaaaaaagca
     6361 agaaagtttt ttgcttgaat atgtgagtgc aaatcctacg ggacctttgc acataggaca
     6421 cgcaagaagt gctgtttttg gtgatacttt aacaaggctt gcaagacatt taggttataa
     6481 atttgataca gaatattatg tcaatgatgc gggcaatcaa atttatttat taggactttc
     6541 tatcttgtta agcgtaaaag aaaatatact tagtgaaaat gttgaatatc ctgatcaata
     6601 ttataaaggc gaatatatag cagatttggc caaagaagct tttgaaaaat ttggtaaaga
     6661 atttttcagt gaaaataata tccctagttt ggctgattgg gcaaaagata aaatgcttgt
     6721 tttgattaag caaaatttag aacaagtaaa gattaagatc gatacttatg caagtgaaag
     6781 atcatattat gatactttaa atgcgacttt aaagtcttta aaagaacata aaggaattta
     6841 cgagcaagaa ggtaaaattt ggcttgcttc ttcgcaaaaa ggcgatgaaa aagatcgtgt
     6901 gattatccgt gaagatgggc gtgggactta cttagcagca gatattgttt atcataaaga
     6961 taaaatgagc cgtggttatg gaaagtgtat caatatttgg ggagcggatc atcatggtta
     7021 tatccctaga atgaaagctg cgatggggtt tttgggcttt aaccctgata atcttgaaat
     7081 tattttagca caaatggttt ccttgcttaa agatggagag ccttataaaa tgagtaaaag
     7141 agcaggaaat tttattttga tgagcgatgt ggttgatgag ataggaagtg atgctttacg
     7201 ctatatcttt ttaagtaaaa aatgtgatac tcatttggaa tttgatatta gtgatttgca
     7261 aaaagaagat agctctaatc ctgtgtatta tattaattat gcacatgcta gaattcatca
     7321 aatatttgtc aaagctggta aaaaaatcga tgatgtgata ggggctgatt tgcaaagttt
     7381 aaatcaagat ggggtgaatt tgctttttga agctttgaat ttaaaggcta ttttaaatga
     7441 tgcttttgag gctagagctt tgcaaaaaat tcctgattat cttaaaaatt tagctgcgaa
     7501 ttttcataaa ttttacaatg aaaacaaagt tgtgggttct gcaaatgaag atgatttgct
     7561 taaattattt tctttggttg ctcttagtgt taaaaccgca ttttctttaa tgggtattga
     7621 agcaaaaaat aaaatggaac attaaaacag caaatatttt gctgttttaa taattgagca
     7681 aaaatactgc tattatcacg ataacgatac ctaagattcc tagtttattt agtttttctt
     7741 tgtataaaat ccaaccacca agacaagttc ctatgatccc tatagcaccc caagttgagt
     7801 aagctatgct taaaggaaca tattttaaag aaaaagaaag cagaaaaaaa gcaagtatag
     7861 tattgataat cgcagccaag ccccaaattt tatgtttaaa accatctgat tttttcaata
     7921 ataaatttgc tataatatcc agtaatgctg ataaaataat gataaaaata tacattattc
     7981 cttaacttca cccatattaa tcataataat tccaacgata gaaagaataa tgcctagaat
     8041 ttgagttaaa gttagacttt ctttaaaaac tataaaagaa actaaaagta tcagaataat
     8101 gcctaaaagt tcccatacag cataggctat gcctacttga atttttttaa tcgctttacc
     8161 cataaaaaaa taagaaaaag ctataaacaa agccataaaa atatagccta aaaattgatt
     8221 ttccattttt aaaaaactgg tacctaaaac ttcaaaaaca atagcagcaa tcaaaaaaaa
     8281 ccaagcagta aaaagttctt tttttgcaat attcaaaaaa cttctccgaa aaaataaatg
     8341 ctaaaatcat accatttaaa gctttaatta gcctttttag tttatacttt taagtttaaa
     8401 aatttttaaa gaaagtgaga atttatggga cgagcgtttg aataccgaag agcttctaaa
     8461 gaggctagat gggataaaat gagcaagctt tttcctaagc ttgctaaagc catacaagta
     8521 gctgctaaag aaggcggtac cgatcctgat atgaatccaa aattaagaag tgctatagcc
     8581 acagcaaaag caaataatat gccaaaagat aatatagacg cagctatcaa gcgtgcgagt
     8641 ggaaaagata gtgcagatat taaaaacatt cattatgaag gcaaagccgc acatggagct
     8701 ttggttatag tcgaatgcat gagtgataat cctacgcgca ctgtggctaa tgtaaaagct
     8761 atttttagta aaaatggcgg agaagttttg caaaatggat ctttaggttt tatgtttact
     8821 agaaaagcgg tttttcatct tgaaaaattt gcaggagatt tagaaggatt agaacttgat
     8881 ttgattgatt caggacttga agaattggag caaaatgaag aagagttagt aatcagcggt
     8941 gattacactg cttttggtga gctaagttct gtcatagaag ctaaaggttt ggtgcttaaa
     9001 aaagcaggac ttgaatatat accaaataac cctgtaagct ttagtgaaga acagcttagt
     9061 gatatagaaa aacttttaga taaattagaa gatgatgatg atgttcaagc tgtttataca
     9121 aatatagatt aaggagaaat aatgataaaa acaatcgaca caagtaaagt aaatgaatat
     9181 aaatttgctc ttatagaaac cgaaaaaggt acaatgaaac tagagctttt tggtgatgaa
     9241 gctccgcaaa cagtttgtaa ttttgctact ttggctaatg aaggatttta taaagattta
     9301 aatttccatc gtgtgattcc aaattttgtg atacaagggg gttgtccaca cggcaatggt
     9361 ataggtggac ctgggtatga aatcatttgc gaatgcgatg atcaagaaca caaacatcaa
     9421 cgcggaactt tatctatggc acatgccgga cgcgatacag gtggttctca atttttcatt
     9481 tgtcatagtc ctcaaccgca tttagatggg gtccatactg tttttggaca aattgatcca
     9541 aaagatgaaa aaagtttaga agttttagac tctatacgcc aaggggacaa aattctaaat
     9601 ataaaaattt gcgataaaat ttaaaatttt taaaaatttt tttgaaacta caatatttac
     9661 aaagctagtc ataaatctga ctagctaaaa atgattaatg tataattttt ttttaaaact
     9721 tttttttcta taatcacaat tttactttac taagtgtgac aaaattacaa ggagttatga
     9781 ttatgaaaac taagttttca cttattttaa gtgcttgtct tctttcatct tcgctttttg
     9841 ctaaaaatac agatgatgag ataactaaac ttcaaaaaca gcttgcacaa attcaagctg
     9901 aacttgcaga aattagaaaa gaaagagaag ctcaagctaa acaaaatgaa gctgtaaaag
     9961 ctgaacttgc agatcttagt gatagagctg atgaaacaga atttcaagct gctttaagca
    10021 aagttaaatt tgggcttgag ttttcaacag cagtttcaaa tacaaactat aaaattagtg
    10081 gacaagatta cagcgctaat aacaaatgga taaatgagct tcatttaaat atgaatgctg
    10141 atattaacga taaaaccaaa ttttatggtc gtttatccat ggctaaaaac tggtctcaaa
    10201 tgggttggag tggaagtccg cttgatttag atgcgggaag aaacacaaga acaagtggac
    10261 ctgtgcttta tgtagataga gcttatcttg attattatat tacgcccgag tggattgcaa
    10321 ccataggaag acaaccagga actgatggcc caggaagtaa ccttagaaat aatgctttaa
    10381 gacaatcaac ctatccagct ttagcaatca atgctctagg cgatgcagcg gtgatcacct
    10441 ataagcctga aagtttacaa gatcacaaag tagctatccg tgcagcttat ggtaaaactt
    10501 atcaatggga tgaagaaggt aaggtaagag attggatgag cgatcaaaaa gatgcggatg
    10561 caaatcttta ctatgctgca gtagaaggag agcttcctat agagggtatg ggagataatt
    10621 tacttatatt taatgtggct catatgactg attttgcatt gccattgcct agcattagta
    10681 ttgggcagca ggttttatta aatcaaggtg tttataatct tggagattta actttggcaa
    10741 atattcattt tgaaaattat aaagcttttg gaacaaattt taattggttt gcatctttgg
    10801 gatattcaaa tggagcaaat gcgcatactc taagcgcaat tcctattgtg caatctcaat
    10861 tagaatttaa cgaaaaagat ggctatgcgg tgcatgtagg tggacgctat gattttacca
    10921 aggctttaaa agtagggtat gagttcttct ggggaagcag atattggtat actatgagtc
    10981 gtccaagtat caatgatcca cttaatatca gaatgacaag aggaacggct catgatattt
    11041 atgtgattta tcaacttgat agatatcaat tcttgcgatt aagttatact aatatccaaa
    11101 acaaatgggg taatcgtggc ttgccatttg gtggatcgaa aaaagataaa gcaagagctg
    11161 ataatatcat gttaatgtat aatgtaaaat tctaaggagc aaaagatgaa aaaaatactt
    11221 tttgcaagtt tattacccat aattgctttg gctgattgtg caagcttaat ggcaaaatat
    11281 gaagctccag agccagagtc aaaaacaatg aaacaagttg aacgatggat tagtaaaaaa
    11341 gttagtgatc cagctgatgc tgctgtttta aaagagtgta tgattgctcg tgcagcagat
    11401 aacccaaatc aagtttcagt tgcgggtaaa taaaaaaagc ggttttatgc cgcttttact
    11461 gtttaatctt ttaagctaca attttaaaat tttttttcaa ataaggctaa tatgcaacaa
    11521 atcatttctt ttatacttga aatggctagt gtttggggat atttaggcat tattgtctta
    11581 atgactttag aaagttgttt tatacccttt ccaagtgaaa ttgtgatgat acctactgga
    11641 tatttagcac ataaaggtga gcttgatatc actctttgta tacttagtgg gactttaggc
    11701 tctgttttag gagctttaat aaattattat atttgctttt tttggggtaa gcaatttgta
    11761 ttaaaatggg gtaagtattt tggtataaat gaaactaaat ttgctaaatt tgaagaattt
    11821 ttcaataagc acggggaatt ttcaaccttt acttgtcgtc ttttaccagg aattcgtcaa
    11881 tacatttcta tgcctgcggg tttagtaaaa atgaaactta taaattttat actttttact
    11941 gcatttggta gtactatttg ggtggctata cttgtatttt tgggttatca tatagggcaa
    12001 aatgaagaat tgatcaagac ttatttgact caaattttaa tcgttataat tgtttttgtg
    12061 attttggcaa gtttgattta tatcaaaatc aaaaagccct ttaaaaaggc ttaaattttt
    12121 atcttttaca ccttatatag cacttttgat ttgttgcaac gatgtatcgc tcttaaaatt
    12181 agcattttaa gagataatgt ttttaagctt taaggatatt gtttgaagtt ctattaaacg
    12241 actagtgatt tttcttctaa atctcttgca tgagctaaat cttgtttata tcatacaagt
    12301 aaaaattctt aacagattcc ttagtaacta taataactat accgattttg ctattttttt
    12361 ccttatttat tttaaaattt gctataatta taatcaattc aatcaaagat tattaaaata
    12421 tggaaaaacc tgatatacaa agattaacta attttttaat cgtatatact aaaactttgc
    12481 taggtgctgg aacttataca gctagagtgg caaaatgtgt aggaagaata gccgaggttt
    12541 atggctatga gataaatatt aatttctttt ttcatcatat cactttaaat gttgtagata
    12601 tggatgataa ttccattcaa agaacttatg ttatacctaa tcgccatgct tatattaatt
    12661 ttaaacttat ttttgatttg agtgctttaa gttgggttat atatgatcat aaatatgatc
    12721 ttgaaaaagc aaaagtcgtt tttgatcaaa tttctcaaca aaaaaagcat tcttatttac
    12781 ttaatctttt atttgtttct gtggcaaatt cagctttttg taggcttttt ggcggtgatt
    12841 ttggggctgg aaatttggtg ttttttgcaa cttttgtggg attgttgtta agatatattt
    12901 taactaaggc aaagattgat ttaagaattc aatacattct ttgttctttt gtttcatctt
    12961 ggcttgtatt tcttggaatt gatatgggat atactaatac ctctgatgtg gctttgggtt
    13021 ctagtatctt atatcttata cccggggtat tttttatcaa ttctgtgatt gatatattaa
    13081 aagatcatat tttaatgggg cttagtcgta ttatcagtgt ggctattttg atttgttgca
    13141 tagcacttgg aatttacatg acacttagta tttcagattt tgggatttta agatgattga
    13201 gtttatttta agagatatgt tttttgctgc tgtggcggga tttggttttg cttatgcttg
    13261 caatccacct ttaaaaactc ttattttatc tgcactttta gcagctattg cacacggact
    13321 tcgttttact ttgatagaat atttttattt tgaaactttg gctatagcta cttttgttgc
    13381 ttcattttgt ataggatgtt taggaattgc cttggcaaaa attatcaaaa tccctgctga
    13441 aattattgct tttcctgcac ttattcctat gatacctgga atttatgctt ataaggcaat
    13501 tttgtatctc atttctttta tacgcagtga tgatttaaaa gctaagtctg aatttttggt
    13561 tcaatttttt gattattttt ttacaaccgt ttctgtaact ttggctttgg ctataggagt
    13621 gagcgttacc ttgcttatat tttttgagca aagttttatg atgactagac atacaaaaaa
    13681 acattaaagc ttgttgtcaa tttgtttaat atttttttat aattttaaat caaattgtag
    13741 tgtagattta gttgtgagtg ataaaagtgg agttgagatt gattattgtc caaagtgtca
    13801 taacatttgg tttgatcaca gagaacttga taaaatcata gaacatagta tttttaattc
    13861 gggaaatttt catcaaattt caagacaaga tatcatgact tagcttataa tcaacataat
    13921 acttataaaa agaaagttgg ttaggcaaat ttttgacttt taatttttat aaaaatatag
    13981 caaatattta tatccttttt agcttaatat cttaaaatgt caagcaaaaa ggatataaaa
    14041 tgtataaatt tttatcacac gaacctttag ctaacaaatc ttatcatcat aatcatgaag
    14101 aacattctca tgaacatcat cactcccatg ctgatgcaag aagtatggat aaaaagattt
    14161 taaaaatttc tcttttgatg actttttcta tgatgttggt gcaatttatt tattcaatcc
    14221 tttcaaattc tttagcactt ttgagtgata ctttacatat gttttctgat gtttttgctt
    14281 tagctcttag ttttttagcc attatagctg tagaaaaatg gcaagatcat caaaaaactt
    14341 ttggatattt tcgtcttgaa gttttagtgg cttttattaa tgctttaacg atcattttat
    14401 cggctttatt tatcatttat gaggctatag aaaaatttat caatccgcaa gaaattgatg
    14461 ctaaaactat gataattgta gctattttgg gatttttggt aaatgggatt aatgctttga
    14521 tgatgtttaa aggtgcaaat ttagaaaatg tcaatatgaa atcagctttt ttacacatga
    14581 tgagcgattt attaggttct ttagcggtaa ttataggtgg gttagcggta tattttagtg
    14641 gcattgttta tatagatact attatagcta ttatactatc gattttgctt ttaagatggg
    14701 cggttatctt gcttaaacaa agcgctaata ttttacttga aagctctcct gtggatatag
    14761 aaaaagttaa acaagttttg cttttagaac ctagcgtgga tgaggtggtg gatttacata
    14821 tcactcaaat tacgaataaa atgttagtag cttccatgca tttaaaggta aggatttgcg
    14881 atctaaaaga atttgaaaaa ttatctcaag atttatcgca taaattacta catgaatttg
    14941 aaatcggaca tattaccata caacctataa ggagtgaaaa tgaaatttaa agtaaaaaat
    15001 gttaattgca tgagttgtgt aaatttgatc aaaaattctc ttgaagatga atttggaagt
    15061 atagaagtag acttggagca taaaatttta agtttaaatt tagaagagag tcaagtatca
    15121 aattttataa aagaatttca agatttaggt tttgaaattg tagagcgttt ataatggaag
    15181 aattgcgtat aaaaataggc aagatgactt gcgttaattg ttctaatgct atagaaagag
    15241 cttgtaaaaa aattaatggt gtaaaagatg ctagtgtttc ttatgtgaat tctagtggag
    15301 tttttttgct tgaagatcaa gaaaaacata aagatattat cgcaaaaatt caagatttag
    15361 gttttgaaat tttagaagat gagcaaagtt tgatcgcata caaggcaaaa aaacatttag
    15421 aattaagaaa aaatttgctt ttaagtatag ttttaagcgt tgttattatg tattttgaaa
    15481 tgtttgttaa aagttctttt tcgcaaaata ttcaaatgac tttgagtttt tttgggatat
    15541 tttattgtgg gagagagttt tttactcatg cttttttagg acttaaaagt aaaaatttag
    15601 atatgaatac tttgattgct ttagggactt tgagtgcttt tatatattct ttttttgtgt
    15661 atttgcaagt ttttaaagaa gagcatttgt attttagtgg tgcgatgatg attatttctt
    15721 ttgtactttt gggaaaatat cttgaaagta aggctaaatt taaagcacaa gattatcaaa
    15781 gaattttaga aaatatagac acgaaaaaga caaaaatttt gcttaaagat gaaaccgtta
    15841 aagaaatttc aagctctttt gtaaaaagtg gtgatgtact tttagtaaaa gaaggagaaa
    15901 gtattgtcgc agatggagtg gtgcttttag gtagtgcaga acttgatatg agttttttaa
    15961 atggggaatt tttacccatt ttaaaaaaag aaggcgatga agttcaagca ggttcagtgg
    16021 ttttaaatgg tgctttaagg attaaagcaa gcaaaaaggc tatggatagt actttagaac
    16081 aaattaaaaa tctagttttt gaagcaggaa atatcaaaag tcctttggca aatttagctg
    16141 atcaaatttc taaatatttt gtaggaggta ttatcttttt tgcttttttg gtttttgttt
    16201 tttggatggc aaaggtagat gcaaataccg cttttttaca cgcttgtgct gtgcttttga
    16261 tttcttgtcc ttgtgcttta ggacttgcta cgcctatagc tttagttgtg gcaagttcta
    16321 atgcggcgaa aaattttatt cttattaaaa atcctgcagc tttagaaaaa ctagccttag
    16381 ttcaatacgc tttttttgat aaaacaggga cattgacaaa agaaaatttg agtattttta
    16441 aacacaatct ttctaaagat gattttgata aattatgtca aattgaaagt ttaagttctc
    16501 atcctatagc tagggcttta catcaagatc aaatttttga tttaaagggt aagggaagag
    16561 tgatagttgg ctcgggcata aattataaag aagataatga tatttatttt gtaggcaatg
    16621 cacagttttt acatgaaaat aaaattgaca caaaagaaac tgatatattt tttgatgctt
    16681 ttaaggggta tgttagagtg tattttgcaa agaatggaaa atgcttaggt ggtgttttgt
    16741 taagcaatgt tttaaaagag ggggctaaag agcttatatt ggatttaaaa aagcaaaatt
    16801 ttaaaacctt tattttaagt ggagaccatg taaaaaatgt ggaaaaaata gccaaagaat
    16861 tgcaagtgga tgaattttat gctcagctta aaagcgaaga aaagctacaa atgattcaaa
    16921 aatttgaaaa aactcttttt gtgggtgatg gggttaatga tgcggcggct ttatctgctg
    16981 caagtgtgag tatgagtttt tcaaaggcaa atgaactcgc aaaaaagata ggagatttta
    17041 ttttgataaa agatgattta tcggctattt ttaaatgctt caagcttgct aaaaaaacac
    17101 gcagtattat caaactaaat cttttttggg cttttatcta taatgtgctt tgtattccta
    17161 ttgcagcggg gtttgtacct tttataaatt taagccccca tatcgcagcc ttagcaatgt
    17221 gctttagctc tattactgtg gtgcttaact ctttaagact tagaaaaatc taagccttaa
    17281 tttcattaat agcacgataa gcttgatcaa tagctgaatg catataagct gaccaatctg
    17341 aatctgaatt agctataaca atattgccaa aaggttttct agctgtaagt ctaatctgtt
    17401 ctgcaatttt aggatcatca taaagactat tttctgtata agaataacag tgtccccaac
    17461 gatttacaac aattgctaat atatcttttt catgattaaa acctgcagaa cctagcattc
    17521 cttggagttg ttctctgatg attttttcat gttcttcaaa actcatggca aatagtagat
    17581 ttctacccac tctagctcta tctctagcat caagtccttc aagatcaata ccttgaatat
    17641 tagctagagc taaaggagaa caaaccatat gaacacatat aggttttttt ggatctcttg
    17701 gatgatgata gccacccata tcaaccggat aatcaagttt tgttctagcg taaggcattt
    17761 ttggtgaata aatttcatga actcctaatt taatgaatgg ttcccaattg tttatgatta
    17821 ctttagtatg aagtaaagat gtttttacat ttttgcttaa agcttctttt tgttcttcag
    17881 gtaagctagg aataatataa ggaatcatgc tgttataatt agccattaca acgttttttg
    17941 cttttattct atattttttt ccttggttga tataacttat caaagctcca ttttttgtat
    18001 tttctacatg aataacagtg ctatttaatc gcaaacgaac tttattgtta gaatcatcaa
    18061 gctttgaata atcaaaatga gctaaagtaa tatcatccat atctttacct ttttgcgaca
    18121 ctgcaggaat gagctttctt accattaatc ttgccactgt agcatttcca tcagcacaat
    18181 gataaatata aggttcttcc atttcggcta aagcttctcc ttcgatagga tcaagtccta
    18241 atttatcaaa tcctggtaaa aaagaaattc ttgcatcctc gcaagaagtt gcatctatgc
    18301 ccaaggctaa aaaatcatct gtcattcctt caaaaaatgt tattgctttt ttagataatt
    18361 ttactttatc ttctaggaat tttttataac ttgttttagc tatatattct tctttttctt
    18421 ctttgcttaa acccttaaga tagtctttat cgcttttaaa aagagctatt aaatcttttt
    18481 tatctttaga attcatagga aaatctttaa taaaattttc aatgcttttt ccattgtttt
    18541 tagaaactgg aatgtcatcg caaataattt ttctaggatt gccattgaca accttatcaa
    18601 taccaaaatt ctcttttgaa aaatataccc ctctgcttaa ttttaaatca ggataaaaat
    18661 tcacatcaaa gcgttttgct aactcatcta tgcttactcc aagtgaattt aagagtttaa
    18721 ttacctcttc agaataaagt gcttttggag attgaaaact ttcactacct ccataactta
    18781 aaatagtatc cccatcaagt tgtatttcat tgcgtctagc atgtcctcca aaatcatcat
    18841 ggttatcaag aatcaaaatt tttttatttt ttccaaatct ttcttgataa aaacaagccg
    18901 cagctaatcc actgattcca gctccaacaa ctactaaatc ataattttct ttaggtttta
    18961 cactactaaa atcaaattta tccccatctc ttaacatatg ggcatattca tagcttttat
    19021 tattgctacc tcttagtcca agtagattag gaggatagta ttcttttgta aagtcttcaa
    19081 ttttactatc ctttccatag agcaattgta aaggcgtcat tcctgcaaca acagctaaag
    19141 ccatgccatt gagaaaatct cttctttgca tttttattcc ttttaaaaaa tttataaaag
    19201 gaaatatttt atctaaaaat aaattatatt tttattatat aagtaatatt ttaatctata
    19261 ttttggattt gaggatttcc aaaacaatcc ttaagagcct ctttaagatc ttcttgtgga
    19321 tcaaattttt tggccccttc tttaagtata ttaatagaac tttgaatatc tatgttttta
    19381 ttttcgttgc ttggcaattc ttgggttaag gattgaagct tgttttcatc aatcgctagt
    19441 actttttgca cattaatttt agcatttttt ccaaatttag ctttgaaaag ctcttgtata
    19501 agtttaaagc ctttatttaa tatatcgcga ttttgtcctt gtgcgtttga acttatattt
    19561 aaagtattat tttcaaaact gataaatttt gtgctttgct taaaacattc tcctaaatca
    19621 aaatttctat cataaatact atcaagtaaa acttcatagg gatttttttc tatttttttc
    19681 tcaagatcag gcatgatagg agaaagcgta atcttaggtg taatatttgt tatgttttct
    19741 tgttttattt cttgaatttg tacatcaatt tcttttaagt gacttgcctc catcatcata
    19801 aaagccataa cacaaagagt aaaaccatca tcatcgcaaa gcatattttt tgcttttgat
    19861 aaaatacgga aaaacctttc atacattaaa atagaaaatt ctgtactttt tgcaaaaaag
    19921 ctttctttta aataaaaaag catttcatca attacacttg aggcttcata gtcttgtagt
    19981 tcttctaaat atgcaaaaac tttttctttg tcttttgtta aaatagcttg ataaaaggct
    20041 ttgatttttt caggatctaa aaagcctaac atatcggtga ttttactaat gctaatctca
    20101 ttttgacaaa aaataatggc ttgatcaagc aaggttaaag tatctcttaa agatccattg
    20161 ccacttcttg ctatgaattt taaagcttct tcttcaaatt taacattttc tttaagtaaa
    20221 atttctttaa ggtgatttaa aatttcactt tgtggaattt gtttaaaacg aaaatgttgt
    20281 gttcttgaaa gcactgtagc aggaagtttt aaaggatctg tcgttgcaag tataaattta
    20341 acatagcttg gtggttcttc taaggtcttt aaaagcgcat ttgcagcttg tggggtgagc
    20401 atatgtactt catcgataat gaaaatttta aaccttgcca tagatggggt gtatttggtt
    20461 tgttcgatta aggtttgtat atcttcaagc ccacggttgc ttgcagcatc catttctata
    20521 atatctatat gtttaccttc aagtgctgca agacagtgct tacaaattcc acacggagta
    20581 tcacttggac cttgttcgca aactaaagca cgtgaaaaaa ttctagcact cgaggttttt
    20641 ccgcttcctc taagtcctga aaaaaggtaa gcatgagcca agcgattgtg atttaaagcg
    20701 tattttaagc ttacgctaac tgttttttgt cctatgagtt catcaaaggt ttttggtctg
    20761 tatttaatcg ctagagcttg aagcattttt tactcattca ttatagataa aagttctaca
    20821 ttatctttgg ttttaagcat tttggaatat aaaaatttca gcgcttcaac atcgtccatt
    20881 tgagaaatag ctgagcggat ggcccaaatt ttttgaagat ttgctacacc ttggagtaat
    20941 tcttcttttc ttgttcctga tttgatgata ttaatcgcag gataaattct tctatcggcg
    21001 atatttctat caagaactat ttcgctattt cctgtacctt taaattcttc aaagatcaca
    21061 tcatccattc ttgagcctgt gtcaattaaa gcagttgcaa ctatagttaa agagccacca
    21121 ttttctatat ttctagctgc accaaagaag cgttttggtt tgtgcaaggc attggcatcc
    21181 actccaccgc ttaagacttt tccactgctt ggagttgcag tattgtaagc gcgtgcaagt
    21241 cttgtaatac tatcaagcaa gatgataaca tctttacctg tttctaccat tctcttagct
    21301 ttttctataa ccagttcagc tacacgtaca tgattataag caggtaaatc aaaagtagaa
    21361 ctaaaaactt cgccttttac acatctttgc atatctgtaa cttcttcggg tctttcgtca
    21421 actaaaagta cgattaaatg tatttcgggg tggtttttcg caatagcggt agcaagttct
    21481 ttcataagct ctgttttacc tgtgcgtggt ggagcaacaa tgagtccgcg ttgtcctttt
    21541 cctatagggg taaaaagatc taaaacacga cctgtaagtt ttattgcatc gtattcgagt
    21601 ttgatttttt ctgttggaaa aataggagtt aagttatcaa ataaaggtct ttctttagct
    21661 tcttgtaaag gtagataatt gattgcttcg atttttaaaa gagcgtagta tttttcttga
    21721 tctttaggtt ctctaacttg tcctgtaacg atatcgccta cacgcagagc aaatttttta
    21781 atttgtgagt ttgaaacata agcatcatta acactatcac taagattaga atccatacct
    21841 cttaaaaagc cataaccttc agaagaaatt tctaaaattc ctgtaaaaag tatgaaacca
    21901 cctttttttg tttgtgcttt taaaatttca aaaataagtt cttgacggcg aaattctctt
    21961 ggattttcga tttcacattc gttagcgatt ttaactaaat tttctagatc taataatttt
    22021 aattcttcaa ttttataacc ttccactgga atgtgggttc tttgatgttg ttttttttct
    22081 ttttccataa gtcctcgtaa gatttagcag aatatttttg taaaatatga ttttagtaaa
    22141 aaaatgcact ttttgtcaaa tttgtctata attgtaaaaa atattttttt aaagtaataa
    22201 ttatgaaatg tgaacattgt agacttgatt ataaacgagc tcaaatgata gagtataagg
    22261 gtaagttttt ttgttgtaaa ggttgtgaga gtgtttggaa aattttatat gaaagtggat
    22321 tggatgagtt ttatgaaaag cttggaaatc aaactttaag ccctgtaaat tttcaaaatg
    22381 aaatgaaaaa ttatgatgaa tttatcacta aaactaaaga aggctttagt gaaatttatt
    22441 tgatgataca cggtatagaa tgtgcagctt gtgtctggct taatgagaaa attttaacca
    22501 aacaagaagg aattttagag cttgatatca atcatttaag tcataaagcg cgtattgttt
    22561 ttgatgagca aagtgtttct ttggtgcaaa ttttaagact tattgaaagt ataggttata
    22621 aagcgagtgc ttatgatgca aataaagctt caaaaaaggc ggatttatta aaaagagaat
    22681 tttattccaa gcttgttgta gctatagctt gtgtaatgaa tatcatgtgg atagcagtgg
    22741 caaaatatgc agggtttttt agtggtatgg acaaagacac taaggatatt ttaaattttg
    22801 ctgaatttat cctttgttcc cctgtgcttt tttatacggg atctcatttt tataaaagtg
    22861 cttttaaaac tttaaaaatg catagtttaa atatggatgt attggttatt agcggagcaa
    22921 gtttggctta tatttattct ttatgggcta tgttttttag ggtaggggaa gtgtattttg
    22981 actctgtagc gatgataatt tgctttgttt ttataggcaa atatcttgag atgtttagta
    23041 aaaagcgcgc cttagatact atagacgggc ttaatgattt tttacaaaat gaagttttgg
    23101 ttttcaatgg taaggaattt attcctaaag aagtacaaaa ggtttgtttg ggtgatagaa
    23161 ttttacttaa aactggagat aaaattttaa tcgatgggat ttgtaaaagt ggtgaaatta
    23221 gcgtggatac ttcttcttta aatggagaaa atactccaaa actcatacaa aaagaagatg
    23281 aaattttttc agcttgtata gtgcttgatg gaagtgtgga gtatgaggca acaaagcttt
    23341 ataaagattc aaaactcagt caaattatcc agcttttaga acttgcaagc tctaaaaaag
    23401 caaagcttga aagcttagtt aatagtcttt cggcttattt ttctagaacg gttttgctga
    23461 tcgcttttat ttgttttagt ttttggtttt tctataaaga agcaagtttt gaaatttctt
    23521 tagtcaatgc gattgcagtt ttgattatcg cttgtccttg tgctttggct ttggcaacac
    23581 cggtaagcaa tcttgtagct ttgggtagag ctttaaaaaa acatatttta tttaaaagtt
    23641 ctagtgtgat agaagatctg agtaaatgtg attgtgtggt atttgacaaa acaggtattt
    23701 taaccaaaat agagcttgag cttaaggaag tttttttaga taaatcgctt aatttaaatg
    23761 agctttataa ttttgtaaaa ctttctaaac accctatttc tcaaaatatt gctttgtatt
    23821 taaagaaaag aggagctaag gatttaaatt tagattttaa aaaactttca aatattcaag
    23881 ctaaaggttt aagtgctgtt ttaaatgaag agttgttttt gggtggaagt tctaagtttt
    23941 tacaagaaaa tggtatttta accaaggagt ttgataatac acattttatt tttgctaaag
    24001 agggtaaaat tttagccttt tttgagtttg gtagtgttct aagagagggt gtaaaagaac
    24061 ttattgacta tcttaaaaaa gaaaaaaaag aattaatgat acttagtggc gatcaccaaa
    24121 aagcagtgga aaaaattgct aaaaaattag aaattcaaaa ttatcaagct tcttgtttgc
    24181 ccgaagacaa gatgaaagct atagaaaatt taagtaaaaa tcacaaagtt ttatttgtag
    24241 gcgatgggat aaatgatgct ttagctttaa aatatgcaag tgtttcgatg actttaagag
    24301 aagggagtga tttggctata gaaagtagtg atgttttgct tttaaaaaat gatttacttt
    24361 ctttaaaaaa agccataaaa ttatctaaaa atacttttaa aattatcaaa caaaaccttg
    24421 ctttttcttt gttttataat gcttgtacta tacctttagc ttttttgggt atgataaatc
    24481 ctttattcgc tgctatttct atgtctttta gtagcataat agtcatttta aatgctttaa
    24541 ggatcaaaga atgaatagta taattatgat gatgatagga gtttctatct tagtgttttt
    24601 tatcatttta gcaactttgc tttgggggat taaaaacaag caatttgatg atgattataa
    24661 atttactact ttaaacgatg atgaggattc tttgcgtgat gctataaaat tagaaaagcg
    24721 taaaaaagaa gctttggata aaaaaaggct ttcgtaaata aagaaagcct aatttagaaa
    24781 ttattttaaa gtttcaatat gagcatcaat agctttaaaa tcttcttcag ttaaaccttt
    24841 aacgttaagt ttcatgattg caccttgacc ataagcattt cttttgcctt ctgaatattc
    24901 tttcatatat tgaagtcttt gagcagaaga aagagttttt aaagctggaa ctttgtttag
    24961 gtaaactttg tcagcgtttg cgccatggca tactgcacat tttttaaaaa gtgtagcgcc
    25021 atctgcagca aaagcagaaa cgccaagaca tgctaaagca gaaactacta ataatttttt
    25081 catttgattt ctccttaata aaaaataaat tgctaggtat tatatacctt tatttttgat
    25141 aaaaatctta agaaattaaa gataatgttt attttctttt taaaaaagct atattataat
    25201 gttttttatg aaaacaaaag cattattttt agatagagac ggtgtgatta atatagataa
    25261 aaaatatgtc tataaaatag aagattttga attttgtgaa gggatttttg aactttgtag
    25321 atattttttg gctaaagatt atttactttt tatagcgaca aatcaatcag gcatagcaag
    25381 gggatattac aaagaaagtg atttttttaa gctttgtgat tatatgtttg aagaatttgt
    25441 caaacaaaat ataagaattg ataaaattta tcattgtccg catttagaag gttgtgagtg
    25501 tcgcaagcct aaagcaggaa tgcttttaaa agcaaaagat gaatttaata tagatatgaa
    25561 aaattctatc tttatagggg ataatttaag cgatatgcaa gcaggattaa atgctgatat
    25621 tggcacttta attttagtta atgaagaaaa aaaagaggat aattttttta gacaatttaa
    25681 aaatttaaaa gaaattttga gcttttttaa gcaaaaggaa aatcaatgaa aatagtgatc
    25741 acaggtggtg caggatttat aggttcgcaa ctggctttaa atttagaaga aaaacatgaa
    25801 attttaatca tcgataaaat gcgtagcagt gcgacttttg agaatggaaa tttgcaaagt
    25861 tttgggcatt ttaaaaattt acttgaattt gatggagagc tttttgtagg cgatattaac
    25921 gatgaaaagg ttttagaaaa gattgaagat tttaaacctg aagtgatttt tcatcaagca
    25981 gctatttcag atactacagt ttttgatcaa actaaggttt tacaaaccaa tttaaatact
    26041 tttaaagact ttatagagct aagtatcaaa cttcatgcaa agctgattta tgcaagttca
    26101 gcttcagttt atggcgatgc aaaaagccca caaactgtgg gcaaagatga agaacctaaa
    26161 aatccttatg ctttttcaaa atttatgatg gataagctag cgaaaaaata ctatgataaa
    26221 gctcatttag tagggcttag gtattttaat gtttatggaa aaggtgaatt ttataaaaac
    26281 aaaaccgctt ctatggtttt gcagtttggc catcaaattt tagctgggaa aaatccacgc
    26341 ttatttgaag gaagtgatca aatttataga gattttactt atatcaaaga tgttatcagt
    26401 gcaaatttaa ttgcccttga ttcaaaatgt ggggtttata atgtaggcag tggtaaagca
    26461 aggacttttc aagatatagt cgatatcttg caaaaagaat taaatacgaa tttaccttgt
    26521 gaatatatcc caaatcctta tgtaaaatct tatcaatttc atactgaagc aaagcttgat
    26581 caaacttggg attataaacc aaaatttagc cttgaagagg ggataaaaga ttatttagta
    26641 gaaattaaaa gaatttttga aaaggaagta aatgcttgag tttttaagta aacaaaaacc
    26701 taaaatttta attatagggg attttatggt ggataattac acttggtgtg attgctcgcg
    26761 tatcagtcct gaagctcctg ttttggtggc taaaactctt aaagaagaca aaagattagg
    26821 tggagctgcg aatgtttatg tgaatttaaa aagtttagga gctgatgttt ttgcgcttgg
    26881 tgttgtgggt gatgatgaga gcggaaaatt tttaaaagaa aatttaaaag gagaattttt
    26941 gatccaaaaa ggacgcaaaa ctccttttaa aaaccgtatt atggcacaca atcagcaagt
    27001 tttaagatta gatgaagaag atacaagtgc gattttgctt gaagatgagc ttataagttt
    27061 atttgatgaa aggattaaag actttaacgc tgtggtttta agtgattatg ccaaaggcat
    27121 tttaacgcct aaggtttgca aagctttgat aaaaaaggcc aatactttaa atatccctat
    27181 tttagtggat cctaaaggga gtgattttag taaatatagc gatgcaactt tgcttactcc
    27241 aaataaaaaa gaagctttag aagctttaaa atttaaaaat ttagagggtg aaaatttaga
    27301 aaaaggtatt aaaaaattaa aagaagattt ttctttgtgt tattctgtca tcactctttc
    27361 agaagctgga atcgcacttt ttgataagag tttaaaaata gcaccggcta aggctttaga
    27421 agtctatgat gtaacgggag caggtgatag tgtaatcgcg gttttggctt tttgtttagc
    27481 aagtgggatt gaaattttta aagcttgtga gcttgctaat gaagctgcgg ccgttgtggt
    27541 gagtaaaata ggtagtgtga gtgtgagttt tgatgagatt aagagtttta agcgtgtgga
    27601 ttttgagaaa aaaatcaaaa gcaaagaaga acttttagca cttttaaaac aaaatgataa
    27661 aaagattgtt tttacaaatg gttgttttga tatcgtgcat tttggacata taaaatacct
    27721 tgaaaaagct aaaagattgg gtgatatttt agttataggc ttaaattcag atgcgagtgt
    27781 gaaaagacta aaaggtaaga atcgtcctgt aaattctgag tttcaaagag cttgtatgtt
    27841 ggcggctttt tattttgtgg attttgtagt gatttttgat gaagatacgc ctttagaact
    27901 tataaatttt ttaaagcccg atattttggt taaaggggcc gattataaag ataagcttat
    27961 cgtgggttta gatttagttt caagagttga attaatcgac tttgaagagg gatttagcac
    28021 gagtaagatc atagaaaaga taaaggataa aaaatgataa atttagtaga aaaagaatgg
    28081 caagaacatc aaaaaatcac ccaagcgagt gaaattttaa aagggcaaat tgcaaaagta
    28141 ggagagcttt tgtgtgagtg cttgaaaaaa ggtggcaaaa ttttaatctg tggaaatggt
    28201 ggaagtgcag ctgatgctca gcattttgca gctgaactta gcggacgtta caaaaaagaa
    28261 cgcaaagctt tagcaggaat cgcacttaca accgatactt cagcacttag cgctataggg
    28321 aatgactatg gttttgagtt tgttttttca agacaagtgg aagctttagg aaataaaaat
    28381 gatgctttag ttggtatttc aaccagtgga aaaagtccta atgttttaga agcttttaaa
    28441 aaggcaaaag aacttaatat gctttgttta gggcttagtg gaaaaggtgg tggaatgatg
    28501 aataagcttt gtaattataa tcttgttgtg ccaagtaatg atacagctag aattcaagaa
    28561 atgcatattt tgatcataca cacgctttgt cagatcatag atgagggttt ttaattgaaa
    28621 gtttttatta tcaatttaga gcgttcttta gatagaaaag aacatatgca aaaacaaatt
    28681 caaaagcttt ttgaaaaaaa tcctagttta aaaaataaat tagaatttat tttctttaaa
    28741 gctattgatg ctaaaaataa agaacatttg gaatttaaag aacattttac ttggtggggt
    28801 tcttgggtgc taggcagaga gctttctgat ggagaaaaag cttgttttgc tagtcattat
    28861 aaactttggc aagaatgcat gaagcttgat gagcctataa tcattctaga agatgatgta
    28921 gaatttagtg atgaattttt aaatcatggg gaagaatata tagaagagct attaaagagc
    28981 aaatatgaat atataagact ttgttattta tttgataaaa gattgtattt tttgaacgag
    29041 agtggatatt atttaagttt tgaaaaactt gctggaactc aaggttatat attaaaacct
    29101 agtggtgcaa aaaaatttat atcaaaagcg aaatttattt atatacctgt tgatgattat
    29161 atggataaat tttataaaca taaagtctta aatattatta aaaagccttt gttattaaaa
    29221 catagctaga attccaaagt gatatttcaa gacttgggcg tcataatcga aaaattaaaa
    29281 tttatagaaa aattattaga gaaatttgca gattttatcc aagtatttta agtttattat
    29341 ctatattata tatacggaac cgattaaaac ttaagtaaat ttttagcttt ttctattact
    29401 ttttcaggct ttagatcttt catgcatttg tggtgtttta aaggacaggt tttttgcata
    29461 caaggcatac aagctagatc taaatgcact aatcttgcgt tttcattttg ccaaggtgaa
    29521 gtttgggtaa atttcgtagg accaaaaata gctatagttt ttaccttata agccgcactt
    29581 atgtgcatag gaccactgtc atttgtgatg aaaagatcac aaaaagcgat attttgacaa
    29641 agagttttga tggtggtttt attgcaaaaa tttttagctt ttgtattttg ttcttttaga
    29701 attttaaaaa tttcattgca gagttcttgt tcggcctttc cagcgccaaa aattaaaatt
    29761 tcatgggttt tgctaaaatt taaagccact ttagcaaaat aactcgcatc ccatcttttt
    29821 gcacttccaa agcttgctcc agggtttaat cctagaattt ttttgccatt ttttaaaata
    29881 agagggcttt gaaattttag cttaaatgga agttttaaat ccttgcaatg agcttttatg
    29941 tcaagtgagt tttctataaa ataaaggtat tttaaaacct gatgttcttc tttatgtttg
    30001 tttttattaa aaaaatatct ttgttttgtt ttaagaatat ataaaacgat tttagaagaa
    30061 agagcagatc taaaagcaat gctaagatcg atcttgccaa gttctttgcg taaagataaa
    30121 gcttgtttgt agcgtgattg tttattttct atgatgattt tggaattagg aaattcttta
    30181 aaaagtgctg tagaaacaaa agatccataa aggataaact tggcatcttt aaaatgttct
    30241 tttatagcgt ataaagcagg tgaagccatc accgcatcac ctaaccaagt aggaaggtgt
    30301 ataaaaattt tcataaattt cctaaacttt gatagaattg tttttaatat tttagcaaaa
    30361 tttaggaaaa atatgccaca actttctatc attatcccgc tttttaattc ttgtgatttc
    30421 atcccaagag ctttaaaaag ctgtataaat caagctttaa gagatattga aattttggtt
    30481 atcgatgata aaagccaaga taatagcttg agcatagcct tagaatttgc taaaaaagat
    30541 ccaaggataa aagtctttca aaataatgaa aatttaggca cttttgcaag tagaaatcgg
    30601 ggtgttttgc attctagttc tgattttgtg atgtttttag atagtgatga ttttttagcg
    30661 ttgaatgctt gtgaaatagt gtttgataag ataaaacaag gttttgattt gctttgtttt
    30721 gatgcctttg tgcataggat aaaaaccaaa caattttatc gttttaaaca agatgaagtg
    30781 tttaatcagg aacagttttt ggaattttta agtcaacaaa ggcatttttg ctggtcggtt
    30841 tgggcgaagt gttttagaaa agatattatt ttaaaaagtt ttgaaaagat taaaatagat
    30901 gagcgtttaa gttatgctga agatgtgctt ttttgctata tcaattttat gttttgtaag
    30961 aaaatagctg
//
LOCUS       DAPWAA010000014        30258 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.014, whole genome shotgun sequence.
ACCESSION   DAPWAA010000014 DAPWAA010000000
VERSION     DAPWAA010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 30258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30258
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.014"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..551)
                     /locus_tag="RTF91_000578"
     CDS             complement(<1..551)
                     /locus_tag="RTF91_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943493.1"
                     /translation="MMKINSLYKIDFIKSTDLLYAQRTGIFKEDELFNNLTSDFKLNK
                     PFDYQIAFLKYNEIYHCFLTPVCKLKKSRFCFPEPLIFQALFDERLIKESDYCVLNLY
                     DKTLYLYFYQEGKFSNLKKIENFNPENIGLFFEQNRFIELLKHYESKLLLHRDLDIIK
                     HYFSSQIKCLNLNDLLDENSLLK"
     gene            complement(538..1413)
                     /gene="era"
                     /locus_tag="RTF91_000579"
     CDS             complement(538..1413)
                     /gene="era"
                     /locus_tag="RTF91_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDZ4943494.1"
                     /translation="MKSGFVSIIGRTNAGKSTLINSLLGEKIALVSHKQNATRRKIKA
                     IVMHEKNQIIFIDTPGLHESGATLNQLLIQSAIKSIGDCDVILFVASVFDSIKDYENF
                     LSLNPQVPHIIALNKVDLTNNATLLKKLSEYTKFSEHFKAIIPYSSKKKSYKKGLLDE
                     IVKYLDEHEYFYDPEFLSASSEKELYRDFILESIYENLSDELPYSSEVLINRTKDIPN
                     LLILEANIITDTNSHKAMLIGKEGATLKRIGKDARFKISKLAQKKVLLKLFITVKKNW
                     QKDEDFLKKLLNDEN"
     gene            complement(1410..2729)
                     /gene="hslU"
                     /locus_tag="RTF91_000580"
     CDS             complement(1410..2729)
                     /gene="hslU"
                     /locus_tag="RTF91_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HDZ4943495.1"
                     /translation="MNLTPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRMQLSPELQ
                     DDIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDL
                     ANAALNLVKNEQREKNKDKIDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEKMRTK
                     LRNGDLDESIIEIEISQNMFDTNPNLPPEMGAMQDIVKVIGVGSKKVKKEMKIKDAKN
                     ALKNEAGEKILDQESIKSEALKRAENEGIIFIDEIDKIAVTSGNSNRQDPSKEGVQRD
                     LLPIVEGSSVQTKIGTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDK
                     ALYEILTRPKNSLLKQYSELLKTENLELDFDDEAIKEIAKIASRANEEMQDIGARRLH
                     TVIEKLLEDLSFEADEYAGKKFVVDKKMVEEKLGDIIENKDLARYIL"
     gene            complement(2726..3268)
                     /gene="hslV"
                     /locus_tag="RTF91_000581"
     CDS             complement(2726..3268)
                     /gene="hslV"
                     /locus_tag="RTF91_000581"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDZ4943496.1"
                     /translation="MFHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNG
                     KVLAGFAGSTADAFNLFDMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVL
                     DRNHIFLLSGTGDVVEPEDGKIAAIGSGGNYALSAARALAKHTDLDEEELVKSSLQIA
                     GEICIYTNTNIKTYVIEDEK"
     gene            complement(3268..3711)
                     /locus_tag="RTF91_000582"
     CDS             complement(3268..3711)
                     /locus_tag="RTF91_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDZ4943497.1"
                     /translation="MKVLLIKDVKTLGKAGEIKEVKDGYGQNFLIAKGFAKAATNEVL
                     RKYESDKKKEAENLRFEMANLEKLKDELSKITLEISKPVGANGSLFGGVTKDEIAHAL
                     KEQSHIEIDKKSLECDTLKGLGIHEVSVKLGHAIHAKFNINIKAE"
     gene            complement(3726..4946)
                     /locus_tag="RTF91_000583"
     CDS             complement(3726..4946)
                     /locus_tag="RTF91_000583"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDZ4943498.1"
                     /translation="MENEIKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGE
                     ELEPARKKALSLGIKEENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIARPLI
                     AKTQAQIALQTGADAVSHGATGKGNDQVRFELGYLAFNPDLKIIAPWRKWDLNSREKL
                     LAYAQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDPAHAPQEDMWRWSKSPKEAS
                     NESEIVELDFQKGDLVAINGEKLSPAGLLTKLNALGCKHGIGRLDIVENRYVGMKSRG
                     CYETPGGTILLKAHRALESITLDREAAHLKDELMPKYASLIYNGYWFSPERIMLQALI
                     DQSQIHANGRVKLELYKGNVMVIGRESANDSLFNAAYCTFEEDEVYNQKDAAGFIKLN
                     ALRFIIAGKNGRKF"
     gene            5101..5346
                     /locus_tag="RTF91_000584"
     CDS             5101..5346
                     /locus_tag="RTF91_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HDZ4943499.1"
                     /translation="MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVVVKASKEVKVG
                     DIITLHFTEYTQKYKVLALPNTKSIPKNAQNEYVVKL"
     gene            5343..5750
                     /gene="tsaE"
                     /locus_tag="RTF91_000585"
     CDS             5343..5750
                     /gene="tsaE"
                     /locus_tag="RTF91_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDZ4943500.1"
                     /translation="MKEFILAKDELKTILKMMPKEGVILLQGDLASGKTSLVQAWVKF
                     LGLDAKVDSPTFSIMQKYENHNICVYHYDIYQEGLDGLLTNGLFEKFFEKGLHLVEWG
                     DENLKKTLMKFGIFSTQIKISIKDNKRKYEIYE"
     gene            5743..6471
                     /gene="lptB"
                     /locus_tag="RTF91_000586"
     CDS             5743..6471
                     /gene="lptB"
                     /locus_tag="RTF91_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943501.1"
                     /translation="MSKLEIVNLEKIIKKTKIIHGVSLEVNSGEVVGLLGPNGAGKTT
                     TFYMICGLISPSSGKVLLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLA
                     AQIFYKDKKILHDKVEQMLELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLL
                     DEPFAGVDPIAVAEIQTLIKELKRLGIGVLITDHNVRETLAICNRAYVIRSGSLLASG
                     NADEIATNKDVKKYYLGAEFKLLD"
     gene            6471..7721
                     /locus_tag="RTF91_000587"
     CDS             6471..7721
                     /locus_tag="RTF91_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HDZ4943502.1"
                     /translation="MLKQKITQAPKTKISQTLRSWLPILQANIEDLKENLDKFAEDNP
                     FFNVQDSIQTHDKGKNYFDLFYKHNVNSTLVDSKGLAKKSVYELLNEQILPPLFPTNK
                     SQELAKKIVECLNEEGYFEYDEEFLKEYSLEEIERVRARFKFLDPVGVGAKDYKEAFL
                     FALENIELDEDIDEFCRMLIMDFENIQNYTKEPLYKEALAILKRFSTPPFLEYFEDSR
                     VIVPDIFVYKENGEIKVKINDDYYPEISIQTDGLEHDFLSHYIKEAKNLVDALAMRKA
                     TLYKIGLMIVEYQYDFFMGKEIKPMTFKDLALDLERNASTISRAVANKYLSCERGLIP
                     LRDFFAFALDEEGETSNAGVKEFVANLVKNEDRRKPLSDSKILELIKEEFKVDIGRRT
                     ITKYRKHLNIASSTDRKKIYELEG"
     gene            7881..9305
                     /locus_tag="RTF91_000588"
     CDS             7881..9305
                     /locus_tag="RTF91_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDZ4943503.1"
                     /translation="MDFLINLSEGGQFAIQVIIVLICLFYGAKKGGIALGLLGGIGIL
                     MLVFAFHIKPGKPAIDVMLTILAVVVASATLQASGGLDVMLQIAERILRRNPKFLTIL
                     APFVTCFLTILCGTGHVVYTIMPIVYDIAIKNGIRPERPMAAASISSQMGIIASPVSV
                     AVVSLTALLLNANHKLAGFDGYINLLQITIPSTLFGVLCIGIFSWFRGKDLDKDEVFQ
                     EKLKDPEFKKYVYGDSKTLLGVKLPKSNWVAMWIFLGAIALVALLGVFDFLRPNWGQV
                     LKNGIPQFDALGNPKMDVLSMVSVIQMFMLLAGSLIIIFTKTDAKKIGSNEIFKSGMI
                     ALVAVFGISWMADTMFAVHTPMMKAALGDIVKEHPWTYAVMLLLISKFVNSQAAAISA
                     FVPLALGIGVEPGVIVAFAAACYGYYILPTYPSDLATIQFDRSGTTHIGKFVINHSFI
                     LPGLIGVITSCIAGYFIAMAAGYL"
     gene            complement(9870..11843)
                     /gene="uvrB"
                     /locus_tag="RTF91_000589"
     CDS             complement(9870..11843)
                     /gene="uvrB"
                     /locus_tag="RTF91_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HDZ4943504.1"
                     /translation="MLELTSDFKPSPDQEKAIKGILKSIKKGNKYQTLLGVTGSGKTF
                     TMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSKNHVEYFISYYDYYQPEAYIPRT
                     DVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
                     GMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIVDIYPAYYEDEVVRLEFFGDEL
                     DVMYHYNVLENKKGKDLKRFILYPTSQFSVGETRLKQAIKDIKTELNERLACFEHENK
                     LVEHQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPYTLFDYFAIKDRKFL
                     VIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKNCQFLFV
                     SATPAPLELELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDESKKVIQRNERVL
                     VTVLTKKLAEELTRYYLELGIKVKYMHSDIDAIERNEIIRGLRSGAFDMLIGINLLRE
                     GLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKSMQEAMD
                     TTNQRRKLQMAYNKKYNITPTSVKRHIEESLKNEENLGEIYRKGKKLEKMPASERAKL
                     VKELRKQMLEAAKALEFEKAAALRDEINKLRDL"
     gene            11996..12226
                     /locus_tag="RTF91_000590"
     CDS             11996..12226
                     /locus_tag="RTF91_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943505.1"
                     /translation="MFDEKIINTMTDKVNELIEKYNEVCEVNEALRNELVSVKAQNEA
                     KSNQIMRLEEELKSRNIESEDIYKKIEAVLGR"
     gene            12216..12458
                     /locus_tag="RTF91_000591"
     CDS             12216..12458
                     /locus_tag="RTF91_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943506.1"
                     /translation="MADNLKQVIVNVNAKDFIVKCSEEFANFLEDDIALISGGTKKIE
                     LKRFVDAFVKKSYENYILERELKKLIKAINEELPTK"
     gene            12455..12892
                     /locus_tag="RTF91_000592"
     CDS             12455..12892
                     /locus_tag="RTF91_000592"
                     /inference="COORDINATES: protein motif:HMM:NF019575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HDZ4943507.1"
                     /translation="MNKAFTLLELVFVILILGILSTLASSFVNTTKDEAKVLKLKMDY
                     EMLSSALALMRSQMKLKNLNFPEILDNAQNNQAKEKLFYCFNDCDYSLLDTPIYSDFK
                     SWMKIGKNHYRFTLNSKEMVEFVYDSKEGLLKCLGSSRCKDLI"
     gene            12874..14727
                     /locus_tag="RTF91_000593"
     CDS             12874..14727
                     /locus_tag="RTF91_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDZ4943508.1"
                     /translation="MQRSNIRYYELAICGLYLDNLTFHSFYEIKPLMQVLVDLRAKKN
                     LKAIVLKECQKPDFKTVEIKEITKYFLTPLQFELANFIVYYYASKLGFVLGFFETTPK
                     YECQKMSFKDTPKLSDQQQSALSFLQKENNSLLFADTGSGKTEIYISLIKECLEQGKQ
                     ALLLMPEIALTPQMQKRLEVYFKDNFFLWHSKISKKKKQEYLERFCKGEVLLVAGARS
                     ALFLPFRNLGLIVVDEEHDNSYKASNQPFFNARDLALFLGQKNKIKVVLGSATPSLTS
                     FYKQKSFRLKGTFFESKKHFLYDENELGITPMLLSELKKSLSYQKQAIVFLPTRANFR
                     QIVCKDCGETIKCPFCSIAMSMHKKKNVLKCHYCNYTSLIKQSCPSCKGVMLEARKMG
                     TAELLELLQNALPLAKIAKFDSDEITSVKKLNAILKDFNENKIDILIGTSMLAKGHDY
                     HSVDLSVILGLDEYLLRPSFRASEETLALAMQVAGRAGRKGEARVLLQTKNRAFFERY
                     IEDYDTFLKDELENRKDLYPPFKRLLRVLIEDKDQQSAQKLCEKLAYQFKNIKQVELV
                     GYGICGVEMLHGKYRFYLLLRSENHKALVAIENYILQFKNTSADIDPIDFV"
     gene            complement(14711..15478)
                     /locus_tag="RTF91_000594"
     CDS             complement(14711..15478)
                     /locus_tag="RTF91_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocholine cytidylyltransferase family
                     protein"
                     /protein_id="HDZ4943509.1"
                     /translation="MNAIILAAGFGSRLMPLTKDQPKCMVEYKNKKIIDYEIEALKSA
                     GVNEIAVIGGYLNDVLKNYLNKYDIKHFFINPKYDKTNMVYTFFCAKDFMLKCIKEKQ
                     DLIISYADIIYSQDCVQKLINAKGELAIVVDKSWHKLWSKRFINPLEDAETLKMKNGY
                     IVELGKKANTYDEIEAQYIGLFKFSNQFLSQVIAFYETLNRDILYDNKNFENMYMTSF
                     LQALIEKYNNAKAVEIDGDWCEIDFMSDLKINFIQNQ"
     gene            complement(15480..16082)
                     /locus_tag="RTF91_000595"
     CDS             complement(15480..16082)
                     /locus_tag="RTF91_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HDZ4943510.1"
                     /translation="MFIGITQRLICNESYHEERECLALDWGKLFNKDLFKNFTPLPLS
                     YEIDFSHYKHKVKAVILSGGNDLSYYNPNVLSKKRDLYEKQVIEVCLKEKIPLLGICR
                     GAQMIAYYFNSHISPCENHIGKHEIFFLKEQFISNSFHNFAIEKLGEDLVELCLAKDN
                     TIEAFKHKYESIFGIMWHIERENGLNNIQILKEWLSLIKE"
     gene            complement(16073..18412)
                     /locus_tag="RTF91_000596"
     CDS             complement(16073..18412)
                     /locus_tag="RTF91_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943511.1"
                     /translation="MAKLNFKTKAQNLKNLQTELKKAKVLPLVLTSLEELTSNEDRIL
                     HNIQTLKANKLIIRSSSFSEDSMKNSNAGAFLSLTNIDSSSKDELLKALYKVANSMPS
                     KSDEILIQPMLENITLCGVGFSVDKDNFSPYFCLQYDENGSNSSITDGSSKSAKTYYH
                     YRDYLGFKDVKLQKIIELIKELESLYDCCFLDIEFAFAFQDDKEELFCLQVRPLVMCE
                     KNNLFHSLPKEALYRFYKRFESLKEARSRVLGDKAIFGVMPDWNPAEIIGLRPKRLAF
                     SLYKEIITDNIWAYQRDNYGYRDLRSHPLIHSFLGIPYVDVRLSFNSFIPKKLDENIA
                     QKLVNFYLDKLNKNHELHDKIEFDIVYSCYDFNSSKKLQELLNHGFNENEIKRLEFSL
                     LELTNKIINPQSGLYLKDIQKACKLKERYDGIVDSNFSLIDKIYWLIEECKRYGTLPF
                     AGVARAAFVAMQLLNSLVEINFISKEEKDDFLNSLNTVNKNLSKQTGYLNSCTKDQFL
                     KEFGHLRAGTYNILSPRYDEDFELYFDANQKDNKVYLQDKVFIFSKEKTKTLNALLKE
                     HGLEINACEFFDFLKQAIEGRELVKFKFTRLLSKAIVYIEELGKYYGIKKEDLAHLDI
                     KSILNLYSSLYSINPKEQFLEEINRNKKEYELTQAIKLPSLLCNADEIFSFYNHSIIP
                     NFITQKSIIAFTAKENDKDLEGKIVLIYAADPGYDYLFTKNIAGLITCYGGANSHMAI
                     RASELGMPAVIGVGEENFEKYLKAKKINIECESEQIFCL"
     gene            complement(18426..19187)
                     /locus_tag="RTF91_000597"
     CDS             complement(18426..19187)
                     /locus_tag="RTF91_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDZ4943512.1"
                     /translation="MQKLVEQAWDYTKHAKFYSYRPNYAPKTIDMLISLVGKKDIKVA
                     DIGAGTGNLSIMLLERGCKVVSVEPNDAMREIGIERTKDKKIDWVRATGLNSTLKNSE
                     FDWVTFGSSFNVMDRNEALEEAHRLLKQEGYFSCMWNHRDLNDPVQKIVEDTIVEFVP
                     NYTRGTRREDQRPIIESRKDLFDNIVYIEEDFYFHQSIENYINAWKSVKNPYWDLETD
                     KGNELFNKISDKISQRLPKEFSIKYTTRCWSAKKI"
     gene            complement(19239..20012)
                     /locus_tag="RTF91_000598"
     CDS             complement(19239..20012)
                     /locus_tag="RTF91_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDZ4943513.1"
                     /translation="MKQGDFTEVAKHYHNRPAYSPFLLEKLITCINDKNKNLKDLNIV
                     EVGAGTGKLTKMLGEMFGCQISAVEPNDNMREEGRKFTQNLSNISWHQGSGEKTHMKD
                     NQADWVVMASSFHWTDPKKSLPEFNRILTGGGYFTAIWNPRHIVEGSIFDEIEKEIKY
                     IVPELTRVSSGTQNVKKWEEILVSTGDFTDCFFMECDYKELWDQERYLGAWHSVNDIQ
                     AQAGEKRWKEILEMIEAKISHMQSIEIPYKIRAWTARKA"
     gene            complement(20062..21492)
                     /locus_tag="RTF91_000599"
     CDS             complement(20062..21492)
                     /locus_tag="RTF91_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HDZ4943514.1"
                     /translation="MQNLLLYIKNNLTPTLAQILLQALQNSNNEKFFTFVLENIEIIC
                     TWLNSSEFKDKYLSTKHPYPPLINPDFIETDASRHCAELAWDLNLPLPKHYKFIYISP
                     HGVGAAAFLRYLNQCCNVTCFASWVLPSDAKERYCINYMYLNDNTISQYAINISEINL
                     PYFDKYLSLLDFNSKIICGVRDPIGILKHSWGRDWSKVLRNYPPEFNLTYDWRYYIHY
                     LTHQNRKIKIDISELQQGAFIISYLLKHFNKDNVHYLDMEEISQSKALNTMNLLAINF
                     NFTPPPFFFKDKLDLFKIKEFRGYIRYLFPITLYANSKDINNTFYLNTPENNKNFNID
                     KISSIPIILDRKHINHQKIDIIQEIIKNDLCNDMGIYIDKNDFKQLKQNNLLFSTIKH
                     YLHDFLHEIKITIDETESKMMKEKDVIDYFAKNKSLVHTFFNIFENDLNHLKQHRPDI
                     VASWKYYQEFEKMCKELGGDIQEKIW"
     gene            complement(21508..22035)
                     /locus_tag="RTF91_000600"
     CDS             complement(21508..22035)
                     /locus_tag="RTF91_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HDZ4943515.1"
                     /translation="MEFLKNGGVIWITGLAGSGKSYIAEALCKKLKEKYNNIIYLDGD
                     ELRDLLGYYGYDKQSRIEMSIKRSKFAHFLSSQNMLVIVSTISMWNEIYEYNKKTLKN
                     YFEIYIKCDFEELKRRDKKNLYSKTLKGEISNVVGIDIAFDEPKSNLIIDNTHMIELD
                     NKISYILTALKIPKN"
     gene            22156..23235
                     /gene="ispG"
                     /locus_tag="RTF91_000601"
                     /gene_synonym="gcpE"
     CDS             22156..23235
                     /gene="ispG"
                     /locus_tag="RTF91_000601"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDZ4943516.1"
                     /translation="MEYKRFKTRQIKVGNVLIGGDAPISVQSMLFTKTRDVEGSLEQI
                     NRLYFAGANIVRLACLDMADARALKEIKAKSSLPLIVDIHFNHNLAVYCAEFIDGVRI
                     NPGNIGSKENVKEVVKACKERSIPIRIGVNHGSIEKQFSNKFGYGVDAMLESAMYNIK
                     LLEDLDFFDIKISMKTSDTQKTIKAYERLRPLCDYPFHLGVTEAGTRFHSTIKSSIAL
                     GNLLLKGIGDTMRVSMTGELEEEIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLIK
                     AIKIVEEKTKYIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQGLVIRHGEVVAKLK
                     ESELVDRFLAEVEDELKSRRKKNEF"
     gene            23198..24463
                     /locus_tag="RTF91_000602"
     CDS             23198..24463
                     /locus_tag="RTF91_000602"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943517.1"
                     /translation="MSLKVGEKRMNFEEYLKNFQVFRDEKENLIYFSKNLKSLDELKV
                     NSFITFKGEKNIAFFDEGALLKDVNLVLGQNCLFFLGKSVLQRAYVEAFLNSTCYIGN
                     KNYFNPAGGKSIIISERTHFIMGDDCLMSLNIWFRTADPHLIYDALTHTRINPSKSIF
                     IGDHCWIAQDCGFVKGAILSSGTIIGAKSLVTSKTYFSNTINAGNPCKELKKGVFFTN
                     GCVHTWDDATSEKFEFFPNKNFVFSYNEKEFLKPELIDKSLSKLQTSDAKLAFVLTKL
                     HLNKSKNRFACFANRQNLAYDDFQSDFTNAFFRIKTSLEYKLGFAMIQGFKSFFGLIK
                     LPFVLLLIVKKHKKEKEIYNTLIKFCPELKLLPLEKCKNFHQALRLKEHLSYQLGFVF
                     LKAFRSRQGGGLPFELYRVIKEFKQKKKA"
     gene            complement(24653..25351)
                     /gene="flgH"
                     /locus_tag="RTF91_000603"
     CDS             complement(24653..25351)
                     /gene="flgH"
                     /locus_tag="RTF91_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HDZ4943518.1"
                     /translation="MKKVLFYVLPFAFFGCSATVDPQISMKPPAYVEELAPKQSNNVE
                     SAPGSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGTL
                     TGSSGLVANALNKVNAYSNIGFQTNSTNNYTGTGSQSRNESFNTTISTRVIKILSNGN
                     YFIEGSRELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTR
                     KPWGSKVIEAIWPF"
     gene            25440..26945
                     /gene="pta"
                     /locus_tag="RTF91_000604"
     CDS             25440..26945
                     /gene="pta"
                     /locus_tag="RTF91_000604"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDZ4943519.1"
                     /translation="MMANLYLMRSRSDELNTIISTNLLKNYSKIYKNIAIYCPVIYIH
                     RIPVLQGWLEEFNINQTLKSAYGFTFREAMEEFSKDPHNFFNVILEEYEELKRRYDFV
                     LVNSFCEFGILDGFDLSIKLAKNLNTPIAAIINDEDKLIAQKYFDHVLDGRNYVLINE
                     NFNFEKVQKLEEYDFITPHRFKYELIKQSVKNKKTVVLPESNDERILRAAEILLKSKV
                     VDLILLGDEEKIRQDAVRLSLDLNTIQIINPLNSEYNQEFTSILYEARKSKGMSLEEA
                     KMLVQDKTYFGTLLIYTAKADAMVSGASTTTAETIRPALQLIKTKEGISSVSGIFFMG
                     LEDQVLAFADCAVNPSPTAEQLATSAYVSAMTAKSFGLEPRIALLSYSSGDSGKGESV
                     DLVKEALKIAKEKYPELNIDGPMQFDCAYDPKTAAKKMPNSKIAGNANVYIFPDLNAA
                     NICYKAVQRTANALAIGPILQGLKKPVNDLSRGCLVDDIVDTVILSAIQAQ"
     gene            26959..28149
                     /locus_tag="RTF91_000605"
     CDS             26959..28149
                     /locus_tag="RTF91_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDZ4943520.1"
                     /translation="MKILVLNSGSSSIKFKFFDDKIVKASGLVEKIAEQNSKVILKNT
                     LNNENFERELTINNHEEGLRIVNELFKESGILADLNALDGCGHRIVHGGEILSEHCLV
                     DDYVLKEIDRVSIFAPLHNPAHLAGIKTMIKAAPSVANVAIFDTAFHRTMPDFAYMYA
                     LPYDFYDKHNIRRYGFHGTSHAFVSSRAANLLEKDKNELNVISAHLGNGASVCAIEKG
                     KSVDTSMGFTPLEGLVMGTRCGDLDPAILPFISHLKGLTIEEIDTLMNKKSGVYGICG
                     YNDFRDIESQIEQGNDKARLALDMFCYRLVKYIGAYFAVLPKTDAIIFTGGIGENDSL
                     VRQKVCEKLAHLGIELDFELNKQRIAGERMINHANSEVKVLVIPTDEELEIARITEEF
                     ISKN"
     gene            complement(28691..28846)
                     /locus_tag="RTF91_000606"
     CDS             complement(28691..28846)
                     /locus_tag="RTF91_000606"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943521.1"
                     /translation="MKNYTRKLNFTQRNLEKKSLEYFYSFENREAIFADIHKSYKFTL
                     MLIKTHH"
     gene            29198..29689
                     /locus_tag="RTF91_000607"
     CDS             29198..29689
                     /locus_tag="RTF91_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943522.1"
                     /translation="MKKFKEFSLHFLFKISEQPVIIKDLLEANALFNDGMLVDPSKLN
                     FNFKILNSYIYFGIFCAVVLLPLLLITHYFLTKLDFHISIVSAVMVTACVFIGYDIFK
                     VYTRKIISKKLIQKAWALHFPYFPYEKYSVMAGEFYKEALKEEIPKANLEQYVLDKII
                     YSK"
     gene            complement(29677..29988)
                     /locus_tag="RTF91_000608"
     CDS             complement(29677..29988)
                     /locus_tag="RTF91_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014769654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943523.1"
                     /translation="MQEKQQNDEDTQKAKNVLLEGFSNATKEDRNLNFNHLLFAALLV
                     SFALFLFAPQIYIRNQIYYLSREIATLRTEESVLNEENKDLKRRLENMRFQNQILDYL
                     E"
BASE COUNT         9906 a         4390 c         4728 g        11234 t
ORIGIN      
        1 aattttaata aactattttc atcaagaaga tcatttaaat ttaagcattt tatttgtgat
       61 gagaagtaat gtttgattat atctaaatcg cgatgaagta gtaatttgct ttcatagtgc
      121 ttcaaaagtt ctataaatcg attttgttca aaaaataaac caatattttc cgggttaaaa
      181 ttttcgattt ttttaagatt gctaaatttt ccttcttgat aaaaatataa atataaagtt
      241 ttatcataca aatttaaaac acaataatca ctttctttaa tcaatctttc atcaaataaa
      301 gcttgaaaaa ttaaaggttc aggaaagcaa aaacggcttt ttttcaattt gcaaacaggt
      361 gttaaaaaac aatgataaat ttcattatat ttaagaaaag ctatttgata gtcaaaaggt
      421 ttatttagct taaaatctga ggttaagtta ttgaaaagtt cgtcctcttt gaatattccc
      481 gttctttggg cataaagcaa atctgtagat tttatgaaat ctattttata tagtgaatta
      541 attttcatca tttaaaagtt tttttaaaaa atcttcatct ttttgccagt tttttttcac
      601 tgttatgaaa agctttaaaa gtactttttt ttgtgcgagt tttgaaattt taaagcgtgc
      661 atctttgcct attcttttta aagtcgcacc ttcttttcct ataagcatag ctttgtgcga
      721 gtttgtatcg gtgatgatat tggcttctaa aattaaaaga tttggtatgt ctttagtgcg
      781 attgataagc acttcactac tataaggaag ttcatcgctt aaattttcat aaatgctttc
      841 aagtatgaaa tcccgataaa gttctttttc actgcttgca cttaaaaatt caggatcata
      901 aaaatattca tgttcatcaa ggtattttac tatctcatct agcaagcctt ttttgtaact
      961 ttttttctta gaagaataag gaatgatagc cttaaaatgt tcactaaatt tcgtatattc
     1021 gctaagtttt tttaaaagcg tagcattgtt ggttaaatca actttattta aagcgatgat
     1081 gtgtggtact tgtggattaa gactaagaaa attttcatag tcttttatgc tatcaaaaac
     1141 actagctaca aataaaatca catcgcaatc tcctatggat ttaatagcac tttggattag
     1201 cagttgatta agcgtagcac cactttcatg aagtcctggt gtatctataa agatgatttg
     1261 atttttttca tgcatcacta tggctttaat tttacgtctt gtggcatttt gtttgtgaga
     1321 aactagggcg attttttctc ctaataagga attaattaaa gtactttttc ctgcattagt
     1381 gcgccctatg atgctaacaa agccgctttt cacaaaatat accttgcaag atctttattt
     1441 tctataatat ctccaagttt ttcttctacc atttttttat caaccacgaa ttttttaccc
     1501 gcatactcat cagcttcaaa acttaaatct tcgagtaatt tttctatcac agtatgcaaa
     1561 cgtctagcac ctatatcttg catttcttca ttggctcttg aagctatttt tgctatttct
     1621 ttaatagcct catcatcaaa atcaagctct aaattttcag tttttaaaag ttcggagtat
     1681 tgttttaaaa gtgaattttt agggcgtgtt aaaatttcat aaagagcttt atcatcaaga
     1741 ctatctaact ctactcttaa aggaaagcgt ccttgaagtt cagggataag atcacttggc
     1801 ttgctaagat gaaaagctcc tgcggcgata aaaagaatgt gatcagtttt taaagtacct
     1861 atttttgttt gcacacttga gccttcaacg ataggaagca agtccctttg taccccttct
     1921 ttgcttggat cttggcggtt tgaatttccg cttgtaactg ctattttatc gatttcatca
     1981 atgaaaataa tcccttcatt ttccgctctt tttaaggctt cgcttttgat gctttcttga
     2041 tctaggattt tctctcccgc ttcgtttttt aaagcatttt tagcatcttt aattttcatt
     2101 tcttttttga cttttttact gccaacgcct ataactttaa ctatatcttg cattgcgccc
     2161 atttcaggtg gtagattagg attagtatca aacatatttt gtgaaatttc tatctctata
     2221 atgctttcat caagatcgcc atttcttagc ttggttctca ttttctcaag actgttttta
     2281 tactcttctt gcttttcatc actaatgcct tttggcaaag gaggtaaaag tttttctaaa
     2341 attttatttt ctataaattc atcaatttta tctttgtttt tttctctttg ctcgtttttt
     2401 accaaattta aagccgcatt agcaagatct cttaccatac tttctacatc gcgacctaca
     2461 aaacctactt ctgtatattt gcttgcttcg attttgataa aaggaaagcc catcatttta
     2521 gctaaacgcc tagcaatttc tgtttttcct acacctgtag atcctatcat taagatattt
     2581 tttggcacga tatcatcttg caattcagga ctaagttgca ttctacggta gcgatttctt
     2641 aaagctatag ctatgatttt tttagctttt ttttgtccta taacataatc atctaaaaat
     2701 ttaacgattt cttttggagt tagattcatt tctcatcctc gattacataa gttttgatat
     2761 tagtattggt ataaatgcaa atttcacccg cgatttgaag acttgatttt acaagctctt
     2821 cttcatctaa atcagtatgt tttgctaagg ctctagcagc tgaaagtgca tagtttccac
     2881 cgcttcctat agcagcgatt tttccatctt caggttcaac tacatcgcct gtgccagaaa
     2941 gtaaaaaaat atgatttcta tcaagtacta gcatcatagc ttcaagtttt cttaggtatt
     3001 tgtcttttct ccattcttta gaaaaatcaa tcgccgcttt taaaagatca cctttagaac
     3061 tttgaaggag attttcaaac atatcaaaaa gattaaaagc atcggctgtt gatcctgcaa
     3121 aacctgctaa aactttgcca ttgttgagtt ttctgatttt tacggcatta ccttttagca
     3181 ctgtgtttcc aaagcttact tgtccatcgc cacctatgac ggatttgttt ttgcctttgt
     3241 aggctaaaat cgttgttgcg tgaaacatta ttctgccttt atgtttatgt taaatttagc
     3301 atggatagcg tgtccaagtt ttacgctaac ttcgtgaatt ccaagaccct ttaaagtatc
     3361 gcattctaag ctttttttat cgatttctat atgactttgt tcttttaaag cgtgagcgat
     3421 ttcatctttg gttacaccgc caaataaact tccattagca cccacaggtt ttgaaatttc
     3481 aagagtaatt ttgctaagtt catctttaag tttttctaaa tttgccattt caaagcgtaa
     3541 attttcagct tcttttttct tgtcgctttc atattttctc aaaacttcat tagtagctgc
     3601 ttttgcaaag cctttggcga ttaagaaatt ttgtccataa ccgtctttta cttcttttat
     3661 ttctcctgct tttccaagcg tttttacatc tttaattaat aatactttca ttatatattc
     3721 ctttattaaa attttcttcc attttttcct gcgataataa aacgcaaagc attaagcttg
     3781 ataaagcctg ctgcgtcttt ttgattgtac acttcatctt cttcaaaagt acaataagcc
     3841 gcattaaaca agctatcgtt tgcactttca cgccctataa ccatcacatt gcctttgtaa
     3901 agctcaagtt ttactctacc attagcgtga atttgtgatt gatcgattaa ggcttgaagc
     3961 atgattcttt caggtgaaaa ccagtatcca ttgtaaatta aacttgcgta ttttggcatg
     4021 agttcgtctt ttaaatgcgc cgcttctcta tcgagcgtga tgctttcaag ggctctgtgt
     4081 gcttttaaaa gtatggtgcc tcctggagtt tcataacaac cgcgactttt cattcctaca
     4141 tagcgatttt ctactatatc aaggcgtcct ataccatgct tacagcctag tgcgttaagt
     4201 ttagttaaaa gtcctgcagg acttagtttt tcgccattta ttgctactaa atctcctttt
     4261 tgaaaatcaa gttctacaat ttcgctttca tttgaggctt cttttggact tttactccat
     4321 ctccacatat cttcttgagg tgcatgagca ggatcttcta aaacaagtcc ttcataagaa
     4381 atatgaagta aatttgcatc catagaataa ggagatttac cttttttctt agaaatatca
     4441 ataccgtgtt tttgtgcata agcaaggagt ttttcacggc tgtttaaatc ccacttacgc
     4501 catggagcga tgatttttaa atctggatta aaagcaagat aaccaagttc aaaacgcact
     4561 tgatcatttc ctttgcctgt tgcgccatgg cttactgcat ctgcacctgt ttgtaaggca
     4621 atttgtgctt gggtttttgc tattagcggt cttgctatac ttgttcctaa aagatattct
     4681 ccttcataaa tagcattggc tctaaacata ggaaatacat aatctttaac aaattcatct
     4741 cttagatctt taatgaaaat attctcttct tttataccta aagaaagggc tttttttctt
     4801 gcgggttcaa gttcttcgcc ttgaccaata tctgctgtaa aagttacaac ttcacaatta
     4861 tattcatctt gaagccattt taaaataatg cttgtatcaa gtccaccaga atacgctaaa
     4921 actacttttt ttatttcatt ttccataaag atatccttat gtatagattt tgaaaattat
     4981 aaaattgtat ctaaatttca ttaaagaaaa gtttttgctt attattttcc taaaaataaa
     5041 agtgaagaca taagcaaatt ttgttccaaa aattgatttt ttttgctaaa attgctttct
     5101 atgagagtag ataaattttt aaatgtagtt aatatcacaa aaagaagagc tatttctgaa
     5161 gatatgtgta aaagtggtgt ggtagggatt aatggtgttg ttgttaaagc cagtaaagag
     5221 gttaaagtag gcgatattat cactttacat tttactgaat atactcaaaa atataaagtg
     5281 ttggctttgc ctaatacaaa aagtattcct aaaaatgcac aaaacgaata tgtggtaaaa
     5341 ttatgaaaga atttatttta gctaaagatg agcttaaaac tatacttaaa atgatgccta
     5401 aagaaggtgt tattttactt caaggagatt tggctagtgg aaaaacaagt ttggtgcaag
     5461 cttgggttaa atttcttggt cttgatgcaa aggtagactc tccaactttt tccattatgc
     5521 aaaaatatga aaatcataat atttgcgttt atcattatga tatttatcaa gaaggtttgg
     5581 atgggctttt aacaaatggt ttatttgaaa aattttttga aaaaggtttg catttggttg
     5641 aatggggtga tgaaaatctg aaaaaaactt taatgaaatt tggaattttt agtacccaaa
     5701 ttaaaattag tattaaagat aataaaagaa agtatgaaat ttatgagtaa attagaaatt
     5761 gtaaatttgg aaaaaattat taaaaaaacc aagattatac atggagtttc tttagaggtt
     5821 aatagcggag aggttgtagg gcttttaggt ccaaatggtg caggaaaaac gacaactttt
     5881 tatatgatat gtggacttat ttctccaagt agtggaaaag ttcttttaga tggtttggat
     5941 gtgacaaaag atcctttaaa caagcgagca agatcaggga taggttattt gcctcaagaa
     6001 agtagtattt ttaaagattt aagtgtagaa gataatttgc ttttagcagc tcaaattttt
     6061 tataaagata aaaaaatttt acatgataaa gttgagcaaa tgcttgagct tttaagcata
     6121 gagcctattc gtttaagaaa aggtttgagt ttaagtggag gtgaaagaag gcgttgtgag
     6181 attgccagaa gtttaatgtg cgaacctaag tttttacttc ttgatgaacc ttttgcaggt
     6241 gttgatccta tagcagtggc tgaaattcaa accttaatca aagagcttaa aagattgggg
     6301 attggagttt taatcacaga tcataatgtg cgagaaactt tagctatttg caatagagct
     6361 tatgttataa gatcaggttc tttgcttgct agtggaaatg ctgatgaaat tgcaactaat
     6421 aaagatgtga aaaagtatta tttaggagcg gagtttaaac tccttgattg atgttaaagc
     6481 aaaaaattac ccaagcaccc aagactaaaa tttctcaaac tttacgctct tggttgccaa
     6541 ttttacaagc aaacatagaa gatttaaaag aaaatttaga caaatttgct gaggataatc
     6601 ctttttttaa tgtccaagat tctatacaaa ctcatgataa aggcaagaat tattttgatt
     6661 tattttacaa gcataatgta aattcgactt tggtagatag taaaggactt gctaaaaaaa
     6721 gtgtttatga gcttttaaat gagcaaattc ttcccccttt gtttcctaca aacaaatccc
     6781 aagagcttgc aaaaaagatt gtagaatgtt taaacgagga agggtatttt gaatacgatg
     6841 aagaattttt aaaagagtat tctttagaag aaattgagcg tgtaagagca agatttaaat
     6901 ttttagatcc tgtaggagta ggagctaagg attataaaga agcatttttg ttcgcccttg
     6961 aaaatataga gttagatgaa gatattgatg agttttgtag aatgttgatt atggattttg
     7021 aaaatataca aaattatacc aaggaacctt tatataaaga agccttagct atacttaagc
     7081 gttttagcac tcctcctttt ttggaatatt ttgaagactc tcgtgtgatt gttcctgata
     7141 tttttgttta taaagaaaat ggtgaaatta aagtaaaaat taatgatgat tattatcctg
     7201 aaatttcaat acaaactgat ggtttagaac atgatttttt aagtcattat atcaaagaag
     7261 caaaaaattt agttgatgct ttagcaatga gaaaagctac tctttataaa ataggactta
     7321 tgatagtaga atatcagtat gattttttta tgggaaaaga gataaaacct atgactttta
     7381 aagatttagc gcttgattta gaacgcaatg cttcaactat atcaagagct gtggcaaaca
     7441 aatatctaag ttgtgaaagg gggcttatcc ctttgcgtga tttttttgct tttgctcttg
     7501 atgaagaggg ggaaacttca aatgcaggtg ttaaggaatt tgtagcaaat ttagtaaaaa
     7561 atgaagatcg tagaaaacct ttaagtgata gtaaaatttt agaattaatc aaagaagaat
     7621 ttaaagttga tataggacga agaactatta caaaatatcg taagcatctt aatattgcaa
     7681 gttctacaga tagaaaaaaa atatatgaac tcgaaggata aaatttatca atacaccaat
     7741 ccttgcactt ttttattata tttaagttaa atttaaataa ttttgaaaaa aattattatt
     7801 ttattattaa aatattattc tttaaattta aaaatgtgat acaataattt ttaaatatca
     7861 atattttcaa aggaattaaa atggactttt taataaacct tagcgaggga gggcaatttg
     7921 caatccaagt cattattgtt ttaatttgtc ttttttacgg tgcgaaaaaa ggcggtatag
     7981 cccttggttt gcttggcggt ataggcattt taatgcttgt atttgctttt catattaaac
     8041 ctggaaaacc agctatagat gttatgctta caattttagc ggtagtggtt gcgagtgcaa
     8101 ctttgcaagc aagtggtggt cttgatgtta tgctccaaat agcagaaaga attttaagac
     8161 gcaatcctaa atttttaacc atattagcac cttttgtaac ttgttttttg actatacttt
     8221 gcggaacagg acatgtggtt tatactatta tgcctattgt ttatgatata gcgattaaaa
     8281 atggtattcg tcctgagcgt ccaatggcag cagcttcgat atcatcacaa atgggtatta
     8341 ttgcatctcc tgtgtctgtg gctgttgtga gtttgacggc tttgcttttg aatgctaatc
     8401 ataaattagc gggttttgat ggttatatca atcttcttca aatcactata cctagcacat
     8461 tatttggtgt attgtgtata ggaatttttt cttggtttag agggaaagat ttggataaag
     8521 atgaagtgtt tcaagaaaaa cttaaagatc ctgaatttaa aaaatatgtt tatggagatt
     8581 ctaaaacact tttaggcgtt aaacttccaa aaagcaattg ggttgcaatg tggattttct
     8641 taggagctat tgctttggtg gcgctactgg gtgtatttga ttttttgcgt ccaaattggg
     8701 gacaagtttt aaaaaatggc attcctcaat ttgatgcttt aggtaatcct aaaatggatg
     8761 ttttatctat ggtttcagtg attcagatgt tcatgctttt agcgggttct ttgattatca
     8821 tctttactaa aacagatgca aagaaaattg gttctaatga aatttttaaa tcaggtatga
     8881 tagcacttgt tgcggttttt ggaatttctt ggatggctga tactatgttt gcagtccata
     8941 ctcctatgat gaaagcagcg cttggggata tagtaaaaga gcatccttgg acttatgctg
     9001 taatgcttct tttaatttct aaatttgtaa actctcaagc agcagctatt tcggcttttg
     9061 ttcctttggc tttgggaatt ggtgttgagc caggtgtgat tgttgctttt gcggctgctt
     9121 gctatgggta ttatatttta ccaacttatc caagtgattt ggctactata caatttgata
     9181 gatcaggcac tactcatatt ggtaaatttg ttatcaatca cagttttatt ttaccaggac
     9241 ttattggcgt aatcacttct tgtatagcgg gttattttat cgctatggcg gcgggttatc
     9301 tttaaaaatt ttagcagggt tttttcctgc taagttcttc atttgtcttt aaaaatgaga
     9361 aaggctattt tatttatctt tcttctgctt ttagttttta tccatttttg tgaaattcaa
     9421 actaggacgt gcggatgata ttttaatagt ttaaacttaa tacttgatct ttattttatg
     9481 ctctatatcc tgaaaaatat actagaaatt ttaataacac tgattatagt ttttatattg
     9541 gctttaattt ttggaaatta tctttataaa attgcaagtt gtaaaaaaac tatttttgat
     9601 tttattttta atcttattga taacttaact tataaaattt gtgtaattat gtagaaggaa
     9661 tatgactaaa gtattcttta catttgattg cttttaatgt tttggtggct attttttcgt
     9721 gatttttatt tgcaagataa actttaaatc ctaattcgat tgattctata aaaaggattt
     9781 gaatttaaac gctgtaattg gttttattgc aaacgcaaaa atataagcat tttgtttaat
     9841 aaggtagaag ttagaacaag ggatatattt tataaatccc ttaatttatt aatctcatct
     9901 cttaatgcgg cagctttttc aaattcaaga gctttagccg cttcaagcat ttgtttgcgt
     9961 aattctttga caagtttagc tctttcgcta gctggcattt tttctagttt tttgcctttg
    10021 cgataaattt cgcctaaatt ctcttcattt tttaaacttt cttcgatgtg gcgtttgact
    10081 gaagttgggg tgatattata ttttttatta taagccattt gaagtttgcg gcgttgattg
    10141 gttgtatcca tagcttcttg catggacttt gtgatctttt tgcaaaaaag taaaaccttg
    10201 ccattgacat ttctagcagc tcttcccatg gtttggatca aacttgtcgt gcttcttaaa
    10261 aaaccttctt tatctgcatc cataatggca atgagtgaaa cttcaggcaa gtcaagccct
    10321 tctctaagca ggttgatacc aattagcata tcaaaagcac cacttcttag gcctcttatg
    10381 atttcgttgc gttctatagc atcaatgtct gagtgcatat atttgacttt aataccaagc
    10441 tctaaataat atcttgtaag ctcttcagca agttttttag tcagcacagt aaccaaaacg
    10501 cgttcgtttc tttgtatgac ttttttgctt tcatcgaata gaatttcaac ctgattatcg
    10561 ctatctttta actctattaa aggatcgagt agtcctgtag gacgcatgat ttgatgaaag
    10621 atattttctt tactaagttc aagttctaaa ggtgcaggtg tggctgaaac aaaaagaaat
    10681 tgacaatttt tatggataaa ttcatcaaac attaaaggac gattatctaa agctgaaggt
    10741 aaacgaaaac cataatccac taaggtctgt tttctacttc tatctcctgc aaacatacct
    10801 cgaaattgtg gtaaagatac atgactttca tcaacaatga caagaaattt tctatctttg
    10861 atcgcaaaat aatcaaaaag tgtataagga gtatcgcctt ctttaagccc tgttaaatgt
    10921 cttgcatagt tttctacgcc tttacacatt cctgtgcttg taagcatttc aagatcaaat
    10981 tcaacgcgtt gtttaaggcg ttggtgttct acgagtttat tttcatgttc aaaacaagca
    11041 aggcgttcat taagctctgt ttttatatct tttatagcct gttttaaacg agtttctcct
    11101 acgctaaatt ggcttgtagg atagagtata aagcgtttta agtctttacc ttttttattt
    11161 tctaaaacat tgtaatgata cataacatca agttcatcgc caaaaaattc aagtcttact
    11221 acttcatctt cataataagc tggataaatg tctacaatat ctccttgaac acgaaaatcc
    11281 gcacgatcaa aaaaattatc atttcttttg tatcccatat ctacaagttt ttttaaaagt
    11341 tctttttgtg aaatttgcat acctaattca aagattaaaa ccatgcctat gtattcattt
    11401 ggatttccaa gtccgtagtt tgctgaaaca ctagcgatac aaaccacatc ttcataactt
    11461 aaaagtgaag cagtagcact aagtcttaag cgttctaagt cttcgttagt ggagctgtct
    11521 ttttctatga aaacatcagt acgcgggata taggcttcag gttggtaata atcataataa
    11581 gatataaaat attccacatg atttttagaa aaaaagcctt taaattcact ataaagttga
    11641 gcacaaaggc ttttgttatg actcatgata agagttggca tatttaattc tttaatcaca
    11701 tttgccatgg taaaggtttt tccacttcct gtaacaccta ataatgtttg atatttgttg
    11761 ccttttttta tactttttaa tatacctttt atagcttttt cctgatcggg actaggttta
    11821 aaatcgcttg taagttctaa catttttcca ctttattttt atttttgaaa aattttaaaa
    11881 gaaaatgctt taattaaaaa ttaattgaca ataaaaacct aaatttaaat ttttttctgc
    11941 tacaatatca aataatattt tccataaatt ataaattctt atagaaggca aaaatatgtt
    12001 tgatgaaaaa ataatcaata ccatgacaga taaagtaaat gaattaattg agaaatataa
    12061 tgaagtttgc gaagttaatg aagctttgcg aaatgagctt gtgagtgtaa aagcacaaaa
    12121 tgaagcaaaa agtaatcaaa ttatgcgttt agaagaagaa cttaaatctc gtaatataga
    12181 aagcgaagat atttataaga aaatagaggc tgttcttggc agataatcta aaacaagtta
    12241 ttgttaatgt taatgcaaaa gattttattg ttaaatgcag tgaagaattt gcaaattttt
    12301 tagaagatga tatcgctttg atttccggcg gtactaaaaa aatagaactc aaacgctttg
    12361 tagatgcgtt tgtaaaaaaa agttatgaaa attatatttt agaaagagaa cttaaaaaac
    12421 taataaaagc tatcaatgaa gaactcccaa caaaatgaat aaagctttta ccttgcttga
    12481 gcttgttttt gtgatattaa ttttaggaat tttgtcaact ttagcttcat cttttgtcaa
    12541 tactacaaaa gatgaagcta aagttttaaa attaaaaatg gattatgaaa tgctaagctc
    12601 ggctcttgcc ttaatgcgta gtcaaatgaa gcttaaaaat ttaaattttc cagaaatttt
    12661 agataatgca caaaataatc aagccaaaga aaaactcttt tattgtttta atgattgtga
    12721 ttattcttta cttgatacac ctatttattc tgattttaaa tcttggatga aaataggtaa
    12781 aaatcactat agatttacat taaattccaa agagatggtt gaatttgttt atgattctaa
    12841 agaaggttta ttaaaatgct taggaagttc tagatgcaaa gatctaatat aagatattat
    12901 gaacttgcta tttgtggttt gtatttggat aatttaactt ttcatagttt ttatgaaatt
    12961 aaacctttaa tgcaagtatt agtggattta agagctaaaa aaaatcttaa agctatcgtg
    13021 cttaaagaat gtcaaaaacc tgattttaaa accgtagaaa ttaaagaaat tacaaaatat
    13081 tttttaactc ctctgcaatt tgaattagca aattttattg tttattacta tgcttcaaaa
    13141 cttggttttg ttttaggttt ttttgaaact actcctaagt acgaatgcca aaaaatgtct
    13201 tttaaagata ctcctaagct aagtgatcag caacaaagtg ctttaagttt tcttcaaaaa
    13261 gaaaataatt ctttgctttt tgctgataca ggtagtggca agactgaaat ttatatttct
    13321 ttgattaaag agtgtttaga gcaaggtaag caagctttgc ttttaatgcc agaaatcgca
    13381 ctcactccac aaatgcaaaa gcgtttagaa gtgtatttta aggataattt ttttctttgg
    13441 cattctaaaa tttcgaagaa aaaaaagcaa gagtatttag agcgtttttg caaaggagaa
    13501 gtgcttttag ttgcgggtgc aagatcggct ttgtttttac cttttagaaa tttaggcctt
    13561 attgtggtag atgaagagca tgataattct tataaagctt ctaaccagcc ttttttcaat
    13621 gcaagagatt tagcactttt tttaggacaa aaaaataaaa tcaaagtggt tttgggttct
    13681 gcaactccgt ctttaacaag tttttataaa caaaaaagtt ttagacttaa aggaactttt
    13741 tttgagagta aaaaacattt tttatacgat gaaaatgaac ttggtattac tcctatgctt
    13801 ttaagtgaat taaaaaaaag tttaagttat caaaaacaag ccatagtatt tttacccaca
    13861 agagctaatt ttaggcaaat cgtttgtaaa gactgtgggg aaacgatcaa atgtcctttt
    13921 tgttctattg ctatgagtat gcataaaaag aaaaatgttt taaaatgtca ttattgcaat
    13981 tatacttctt taataaagca aagttgtcca agttgcaaag gtgtaatgtt agaagctagg
    14041 aaaatgggaa ctgcagaact tttagaactt ttgcaaaatg ccttgccttt agcaaaaata
    14101 gcaaaatttg acagtgatga aattacaagt gttaaaaagc ttaatgctat tttgaaagac
    14161 tttaatgaaa ataagattga tatacttatc ggtacttcta tgcttgctaa aggccatgat
    14221 tatcatagtg tggatttgag cgtgatttta ggacttgatg agtatttact gcgtcctagt
    14281 tttagggcga gcgaagaaac tttagcttta gccatgcaag ttgcaggtag agcagggcgt
    14341 aaaggcgaag caagagtgct tttacaaaca aaaaatagag ctttttttga aagatacata
    14401 gaagattatg ataccttttt aaaagatgag ttagaaaata gaaaagatct ttatcctcct
    14461 tttaaacgcc ttttaagagt ccttatagaa gataaggatc aacaaagtgc acaaaaactt
    14521 tgtgaaaaac ttgcttacca atttaaaaac atcaaacaag tagaattagt aggttatgga
    14581 atttgcggag ttgaaatgct gcatggaaaa taccgttttt atttactgct tagaagtgaa
    14641 aatcataagg ctttggtggc aattgaaaat tatattttgc aatttaaaaa tacaagtgcg
    14701 gatattgatc ctattgattt tgtatgaaat taatttttaa atcactcata aaatcaattt
    14761 cacaccaatc accatctatc tccactgctt ttgcattgtt atatttttca attaaagctt
    14821 gtaaaaaact tgtcatatac atattttcaa aatttttatt atcatataaa atatcacgat
    14881 taagtgtttc ataaaaagca ataacttgag aaagaaattg attagaaaat ttaaaaagtc
    14941 ctatatattg agcttctatc tcatcatagg tattggcttt ttttccaagt tctacaatat
    15001 aaccattttt catttttaat gtttcagcat cttctaaggg atttataaag cgtttgctcc
    15061 aaagcttatg ccaagattta tcaactacta tagcaagctc ccctttggca tttataagct
    15121 tttgcacaca atcttgagaa taaataatat ccgcataaga aataatcaaa tcttgctttt
    15181 ctttaataca ctttaacata aaatctttag cgcaaaaaaa agtatacacc atattagttt
    15241 tatcatattt tggattgata aaaaaatgtt taatatcata tttattaaga taatttttca
    15301 gtacatcatt taaatatcca cctataacag ctatttcatt tacacctgct gattttaaag
    15361 cttcaatttc ataatctatt atttttttat ttttatactc aaccatgcat tttggttgat
    15421 cttttgttaa aggcatcaat cttgatccaa aacctgctgc taaaataatc gcattcattt
    15481 tattccttga ttaagctaag ccattctttt aaaatttgaa tattatttaa cccattttct
    15541 ctttcaatat gccacattat accaaaaata ctttcatact tatgtttaaa agcctctata
    15601 gtgttatctt ttgctagaca aagttctaca agatcttcgc ctaatttttc aatagcaaaa
    15661 ttatgaaaag aattacttat aaattgttct tttaaaaaaa atatttcatg cttgcctata
    15721 tgattttcac aaggacttat atgactatta aaataataag ctatcatttg ggctcctctg
    15781 caaattccta aaagtggtat tttttctttt aagcaaactt ctataacttg cttttcatat
    15841 aaatctcttt tttttgataa aacattagga ttgtaataac ttaaatcatt gccaccgctt
    15901 aatatcacag cttttacttt atgtttataa tgagaaaaat ctatttcata gctaagagga
    15961 agaggggtga aatttttaaa taaatcttta ttaaataatt ttccccaatc taaagctaaa
    16021 cattctcttt cttcatgata actttcattg caaataagcc tttgagtaat acctataaac
    16081 aaaatatttg ctcactttca cattctatat ttattttttt agcttttaaa tatttttcaa
    16141 aattttcctc cccaactcct ataacagcag gcattccaag ttctgaagca cgaatggcca
    16201 tatgtgaatt agcaccccca taacatgtaa tgagtcctgc tatatttttt gtaaataaat
    16261 aatcatatcc aggatctgct gcataaatta aaacaatctt tccctctaaa tctttatcat
    16321 tttctttggc tgtaaatgca attatgctct tttgtgtaat aaaatttgga atgatactat
    16381 gattataaaa agaaaaaatt tcatcggcat tacaaagtag agaaggaagt tttatagctt
    16441 gtgtaagttc gtattctttt ttgttgcgat taatttcttc taaaaactgc tcttttggat
    16501 ttatagaata aaggctagag taaagattta aaatactttt tatatcaaga tgagctaaat
    16561 cttctttttt aataccataa tacttaccca actcttctat ataaactatg gctttagaaa
    16621 gcaatctagt gaatttaaat ttaaccaact ccctaccttc aatagcctgt tttaaaaaat
    16681 caaaaaattc acaagcatta atttctaatc catgctcttt aagcaaagca tttaaagtct
    16741 ttgtcttttc ttttgaaaaa ataaagactt tatcttgtaa ataaacttta ttatcttttt
    16801 gatttgcatc aaaataaagc tcaaaatctt catcatatct tggagataaa atattataag
    16861 ttcctgctct taagtgccca aattctttca aaaattgatc tttagtgcaa gaattgagat
    16921 agcctgtttg tttgcttaaa tttttattaa ccgtattgag tgaatttaaa aaatcatctt
    16981 tttcctcttt acttataaaa ttaatctcga ccaaagaatt taaaagttgc attgctacaa
    17041 atgcggctct agctactccc gcaaaaggca aagttccata acgcttgcac tcttcaataa
    17101 gccaataaat tttatcaatt aaagaaaaat ttgaatcaac aataccatca tatctttctt
    17161 tcaatttaca agctttttgt atgtctttta aataaagccc tgattgagga ttgatgattt
    17221 tatttgtaag ttctaataat gaaaattcta atcttttgat ttcattttca ttaaaaccat
    17281 gatttaaaag ttcttgtaat tttttagaac tattaaaatc atagcaagaa taaacaatat
    17341 caaattcgat cttatcatgc aattcatgat ttttattaag tttatccaaa taaaaattga
    17401 caagtttttg tgcaatattt tcatctaatt tttttggtat aaaagaatta aaagataatc
    17461 ttacatccac ataaggaata cccaaaaaag agtggatcaa aggatgagat cttaaatctc
    17521 tataaccata attatctctt tgataagccc aaatattatc cgtgataatt tctttatata
    17581 agctaaaagc caaacgctta ggtcttaaac ctatgatttc agctggattc caatcaggca
    17641 ttactccaaa aatagcctta tctcctaaaa ccctagatcg agcctctttt aaagactcaa
    17701 agcgtttata gaatctatat aaggcctctt ttggcaagga atgaaataaa ttattttttt
    17761 cgcacataac caaaggacgc acctgcaaac aaaaaagctc ttctttatca tcttgaaaag
    17821 caaatgcaaa ttcaatatct aaaaaacaac aatcatataa agattctaac tcctttataa
    17881 gctctataat tttttgaagt ttaacatctt taaaacctaa ataatctcta taatgatagt
    17941 aagtttttgc acttttactg cttccatccg taatagagct atttgaacca ttttcatcgt
    18001 attgaagaca aaaataaggg gaaaaattat ctttatcaac gctaaaacca acaccgcaaa
    18061 gtgtaatgtt ttcaagcata ggttgtatta aaatttcatc gctttttgat ggcatggaat
    18121 tagcaacttt atataaagct tttaataact catctttgga acttgaatca atatttgtca
    18181 aggaaagaaa agcacctgca ttagagtttt tcatactatc ttcgctaaaa gaagaacttc
    18241 ttataataag cttattagct tttaaagttt gaatattatg taaaattcta tcttcattcg
    18301 atgttaattc ttcaagcgaa gttaaaacca aaggtaaaac ttttgctttt tttaattccg
    18361 tttgtaaatt ttttaaattt tgtgctttgg ttttaaaatt taacttcgcc atttttttcc
    18421 ttgatttata tttttttagc gctccaacaa cgagtggtat attttatgct aaattcttta
    18481 ggaagtcttt gtgaaatttt atcactaatt ttattaaata attcatttcc tttatcagtc
    18541 tctaaatccc aataaggatt tttaacgctc ttccatgcat taatataatt ttcaatgctt
    18601 tgatggaaat aaaaatcttc ttcaatatag acaatattat caaaaagatc cttacgactc
    18661 tctataattg gtctttgatc ttctcttctt gttcctcttg tgtaatttgg tacaaattct
    18721 acaatagtat cttcaactat tttttgcaca ggatcattta aatctctatg attccacata
    18781 caagaaaaat acccttcttg ttttaataaa cgatgcgctt cttctaaggc ttcatttcta
    18841 tccattacat taaaactact accaaaagtc acccaatcaa attcactatt tttcaacgtt
    18901 gaatttaagc ctgttgctct aacccaatcg atctttttgt ctttagttct ttctatacca
    18961 atctcgcgca tagcgtcatt tggttccaca gataccactt tacatcctct ttctaaaagc
    19021 ataatgctta aatttccagt tcctgcgcca atatcagcta ctttaatatc tttttttcca
    19081 actaaactga tcaacatatc tatagttttt ggagcataat ttggtctata gctataaaat
    19141 ttagcatgtt tggtataatc ccacgcttgt tctactagtt tttgcatttt atttcctttt
    19201 ttcatctttg acaagcttaa tgaaaaaagg aaaatatttt atgcttttct agctgtccaa
    19261 gcccttattt tataaggaat ttctatactt tgcatatgag aaattttagc ttctatcatc
    19321 tctaaaattt ccttccatct tttctcaccc gcttgtgctt gtatatcatt tacagaatgc
    19381 caagctccaa gataacgctc ttgatcccac aactctttat agtcgcactc cataaaaaag
    19441 cagtccgtga aatctcctgt tgaaacaaga atttcttccc attttttaac attttgagta
    19501 ccactactta cacgagtaag ctctggaaca atatatttaa tctccttttc gatttcatca
    19561 aaaatcgaac cttctacaat gtggcgagga ttccaaatcg cagtgaaata ccccccccct
    19621 gtcaatatac gattaaattc aggaagtgat tttttaggat ctgtccagtg aaaagaactt
    19681 gccatgacaa cccaatcagc ttgattatct ttcatgtgag ttttttcgcc acttccttga
    19741 tgccaagaaa tatttgataa attttgtgta aattttcgcc cttcttcacg catattatca
    19801 tttggctcta cagcactaat ttgacatcca aacatttctc ctaacatctt agtaagtttt
    19861 ccagtaccag ctcctacttc aacaatgttt aaatctttta aatttttatt tttatcattg
    19921 atacaagtta taagtttttc aagtaaaaat ggactataag caggtctgtt atgataatgc
    19981 tttgcaacct ctgtaaaatc accttgcttc atgttatttc ctttcttaaa ttaaaataat
    20041 tatacatttt ttttgtttaa tttaccaaat tttttcttga atatcaccac ctaactcctt
    20101 gcacattttt tcaaattcct gataatattt ccaagaagca actatatcgg ggcgatgttg
    20161 ttttaaatga tttaaatcat tttcaaaaat attaaaaaaa gtatgaacaa gcgatttatt
    20221 ttttgcaaaa taatctatca catctttttc tttcatcatt tttgattctg tttcgtctat
    20281 ggttatttta atttcatgca aaaaatcatg caaataatgt ttaattgttg aaaataaaag
    20341 attattttgt tttaattgtt tgaaatcatt tttatcaatg tatatgccca tgtcattaca
    20401 taagtcattt tttataattt cttgtattat gtctattttt tgatggttaa tgtgttttct
    20461 atctagaatt ataggaatgc tagagatttt atcaatattg aaatttttat tattttcagg
    20521 ggtgtttaga taaaaagtgt tattaatatc tttagaattt gcatagagtg taataggaaa
    20581 aagataacga atatagcctc taaattcttt aattttaaat aagtctaatt tatctttaaa
    20641 aaaaaaaggg gggggggtaa aattaaaatt tatagcgagt aaattcatag tatttaaggc
    20701 ttttgattgg gagatttctt ccatatcaag ataatgtacg ttatctttat tgaaatgttt
    20761 taacaaataa gagatgataa aagccccttg ttgcagttca cttatatcaa ttttaatttt
    20821 gcgattttga tgagtaaggt agtgaatata ataacgccaa tcataagtta gattaaattc
    20881 aggtggatag tttcttaaaa ctttactcca atctctcccc cagctatgtt ttaaaattcc
    20941 tattggatca cgaactccac aaatgatttt agagttaaaa tctaataaag atagatattt
    21001 atcaaaataa ggtaaattaa tttctgatat attaatagca tattgagaga ttgtattatc
    21061 atttagatac atgtaattaa tacagtatct ttccttggca tcagagggta aaacccaaga
    21121 agcaaaacaa gttacattac aacattgatt aaggtatctt aaaaatgctg ctgccccgac
    21181 tccatgtgga gaaatataaa taaatttata atgtttaggt aagggtaaat ttaaatccca
    21241 agctaattct gcacaatgtc gactagcatc tgtttctatg aaatcaggat tgattaaagg
    21301 agggtaagga tgttttgttg ataagtactt atctttaaat tcactggagt ttagccaagt
    21361 gcaaattatt tcaatatttt ccaaaacaaa agtaaaaaat ttttcattat ttgaattttg
    21421 caaagcttgt aaaagaattt gagccaaggt tggagttaaa ttgtttttta tgtaaagtag
    21481 aagattttgc atatagactt tctttcttta atttttcgga attttaagag ccgttaagat
    21541 ataagaaatt ttattgtcaa gttctatcat atgagtatta tcaattatca aattagattt
    21601 tggctcatca aaagcaatgt ctattcctac aacatttgat atttcacctt ttaaagtttt
    21661 actgtacaag ttttttttgt cacgcctttt caattcttca aaatcacatt ttatataaat
    21721 ttcaaaataa ttttttaaag tttttttatt atattcataa atttcattcc acatggaaat
    21781 agtgcttaca ataactagca tattttgaga gctaagaaaa tgtgcaaatt tagaacgctt
    21841 tatcgacatt tcgatacggc tttgtttatc atatccataa tatcctaaaa gatctctaag
    21901 ttcatcacca tcaagataaa taatattatt gtatttttct tttaactttt tacataatgc
    21961 ttctgcaata taacttttac cactgcctgc tagtcctgta atccaaataa ctccaccatt
    22021 ttttagaaat tccataaatg atcttcttta ttttaaagta aacattaaat tttatctata
    22081 attaccaaaa ataaacttta attaaagcaa taaaaagtta aaatttggta ttaaaatttt
    22141 ttaaagagtg aagttatgga gtataaaaga tttaaaacaa ggcaaatcaa agtaggaaat
    22201 gttttaatag gtggtgatgc gcccatttca gttcaatcta tgctttttac taagacaaga
    22261 gatgtagaag gttctttaga acaaattaac cgtctttatt ttgcaggagc aaatatagtg
    22321 cgtttggcgt gtttggatat ggctgatgca agggctttaa aagagattaa agctaaaagt
    22381 tctttacctt taattgtaga tattcatttt aatcataatt tggctgtgta ttgtgctgaa
    22441 tttatcgatg gagtgcgtat aaatcctgga aatataggct ctaaggaaaa tgtcaaagaa
    22501 gtagtaaaag cgtgcaaaga acgcagtatt cctatacgca tcggtgtaaa tcatggttct
    22561 atagaaaaac aatttagtaa taaatttggc tatggtgttg atgctatgct agaaagtgca
    22621 atgtataata tcaaactttt agaggattta gatttttttg atattaaaat ttccatgaaa
    22681 acttcagata ctcaaaaaac cataaaagct tatgagagat taagaccgct ttgtgattat
    22741 ccttttcatt tgggagtaac cgaagctggg actagatttc atagcactat aaaaagctcc
    22801 atagctttgg gaaatttact tcttaaaggt ataggcgata ctatgcgtgt ttctatgacg
    22861 ggcgaacttg aagaagaaat tcgtgtagca agggctattt tacaagatag tggagtacaa
    22921 aaaagcggag taaatattat ctcatgccca acttgtggac gcatacaaag tgatttgatt
    22981 aaggcgatta agattgtcga ggaaaaaaca aaatacatta aagagccttt aaatatcagt
    23041 gttatgggtt gtgtggtaaa tgctttaggt gaggctaagg gtgcggatgt ggctatagct
    23101 tttggtaaaa atcaagggct ggttataaga cacggtgagg ttgtggctaa acttaaggaa
    23161 agcgagcttg tagatagatt tttagctgag gttgaagatg agcttaaaag taggagaaaa
    23221 aagaatgaat tttgaggaat atttaaaaaa ttttcaagtt ttcagggatg aaaaagaaaa
    23281 tcttatttat ttttctaaaa atttaaaaag ccttgatgaa cttaaagtaa atagttttat
    23341 cacatttaaa ggagaaaaaa atatcgcctt ttttgacgag ggagccctat taaaagatgt
    23401 gaatttggtc ttaggacaaa attgcttgtt ttttttggga aaatctgtgc ttcaaagagc
    23461 ttatgttgag gcttttttaa attctacttg ttacataggc aataaaaatt atttcaatcc
    23521 agcaggagga aaaagcataa tcatttcaga gagaacgcat tttataatgg gcgatgattg
    23581 cttaatgtcc ttgaatattt ggtttcgtac ggctgatccg catttaattt acgatgctct
    23641 cactcatact agaataaatc ctagtaagag catttttata ggagatcatt gctggatagc
    23701 tcaagattgc ggttttgtaa aaggggctat tttatcaagt ggaactataa ttggtgcaaa
    23761 aagtttagtt acctcaaaga cctatttttc aaatactata aacgctggaa atccttgcaa
    23821 agagcttaaa aagggtgttt tttttacaaa tggttgcgtg catacttggg acgacgcaac
    23881 gagtgagaaa tttgagtttt ttcctaataa aaattttgtg ttttcttata atgaaaagga
    23941 atttttaaaa cctgagttaa ttgataagag tttaagcaaa cttcaaacta gcgatgcgaa
    24001 actagctttt gttttaacaa aattacattt aaataaaagt aaaaatcgtt ttgcatgttt
    24061 tgcaaatagg caaaatttag cttatgatga ttttcaaagt gattttacaa acgccttttt
    24121 taggataaaa acttccctag aatacaagct tggttttgcg atgatacaag ggtttaaatc
    24181 tttttttggt cttataaaac tgccctttgt tttgctttta attgtaaaaa agcataagaa
    24241 agaaaaagaa atttacaata cccttataaa attttgccca gaacttaaac ttttgccttt
    24301 agaaaaatgt aaaaattttc atcaagcctt aagattaaaa gagcatttaa gctatcaatt
    24361 aggatttgtt ttcttaaaag cttttagatc aagacagggg gggggattgc cttttgagct
    24421 ttatagagtg ataaaggaat ttaaacaaaa gaaaaaagcg taaaatcaat tttttgtgtt
    24481 ttaggctaaa tttttaaaaa gatgagaatg actagaattt tgcttttaga agatgatata
    24541 aatatcggtg atctggtaga atatctaagc gatgagggtt ttggtgtaga ttttgaaaat
    24601 gaggtaaaaa tatagaaaaa atgaaagcct aaagcaaggt taaccttgct ttttagaatg
    24661 gccatatcgc ttctataacc ttactgcccc aaggttttct agtgcttcta tccacttcac
    24721 cttctgtttt gtatagaatt ttggcatcag ctatgtattt gctatctatg gtattgtctt
    24781 gaccgatatc ataaggacga ataacgccgc ttaattgtat gatttgcttt tctccattga
    24841 ttaaaagctc tcttgagcct tcgataaaat aattaccatt ggataaaatt ttaatcacac
    24901 gtgttgaaat tgtggtatta aaactttcat ttctgctttg agaacctgtt cctgtatagt
    24961 tgtttgtgct gttggtttga aaacctatat tagaataagc attaacttta ttaagagcat
    25021 tggctaccaa tcccgaactt cctgttagag ttcctccacc taaatttgaa gtattagttc
    25081 tacttgttgc tttgttagct tgtgtgcttt gagtagtgct ttcttgtatt acaactgtaa
    25141 ctaaatcatt tacattcata gcttttttgt ctgaaaataa aggattatct cctttgccaa
    25201 aaagcgatcc tggcgcactt tctacattat tgctttgttt tggggcaagt tcttccacat
    25261 aagcaggtgg tttcattgaa atttgtggat caaccgttgc ggagcaacca aaaaaagcaa
    25321 atggtaacac ataaaataaa acttttttca ttttcgtcct ttaaaatatg aatttttatt
    25381 tttctttgtt aaaattaaaa aagcaaagag tgttccacat ttataaaatc aaggagaaaa
    25441 tgatggcaaa tctttatttg atgagatcta gaagtgacga gctaaatact attattagca
    25501 caaatttgct taaaaattat agtaaaattt ataaaaacat cgcaatttat tgtcctgtga
    25561 tatatataca tcgtatccct gttttgcaag gttggttgga agaatttaat atcaatcaaa
    25621 ccctaaaaag cgcttatggt tttactttta gggaggcaat ggaagaattt agcaaagatc
    25681 cgcataattt tttcaatgtt attttagaag aatacgaaga gctaaaacgc agatatgatt
    25741 ttgtgcttgt aaatagtttt tgcgaatttg gaatacttga tggatttgat cttagtataa
    25801 aattagctaa aaatcttaac actcctatcg ccgctattat caacgatgaa gataaactta
    25861 tagcacaaaa atactttgat catgttttag atggtcgtaa ttatgttttg attaatgaaa
    25921 attttaattt tgaaaaagtg caaaagcttg aagaatatga ttttataacc ccgcatcgtt
    25981 ttaagtatga actgattaaa caaagtgtga aaaacaaaaa aaccgttgtt ttgccagaaa
    26041 gtaatgatga gagaatttta agagctgctg aaattttatt aaaaagcaaa gtcgttgatc
    26101 ttattttatt aggcgatgaa gaaaagatta ggcaagatgc tgttagatta agtcttgatt
    26161 taaatactat acaaattata aatccactca attcagaata taatcaagaa tttacttcta
    26221 ttctttatga ggcaagaaaa tctaaaggaa tgagtttgga agaagctaag atgctagttc
    26281 aggataaaac ttattttgga accttgctta tatatactgc aaaagctgat gctatggtta
    26341 gtggggcatc aactactaca gctgaaacga ttcgtcctgc attgcagctt attaaaacca
    26401 aagaagggat tagctctgtt tcaggaattt tctttatggg gcttgaagat caagttttag
    26461 cttttgctga ttgtgctgta aatccaagtc caactgctga acaacttgca actagtgcct
    26521 atgtgagtgc tatgactgct aaatcttttg gacttgagcc aaggatagct ttactttctt
    26581 attctagtgg tgatagcggt aagggagaaa gtgtagatct tgtaaaagaa gcattaaaaa
    26641 ttgctaaaga aaaatatcct gagctaaata tagatggtcc tatgcagttt gattgtgcct
    26701 atgatccaaa aaccgcagca aagaaaatgc caaattctaa gatagcaggc aatgcaaatg
    26761 tatatatttt ccctgatctt aatgcagcaa atatttgtta taaagcagtt caaagaaccg
    26821 ctaatgcttt agcaattggt cctattttgc aaggacttaa aaaacctgtt aatgatttaa
    26881 gtcgtggatg tttggtagat gacattgtag atactgtaat tttaagtgct atacaagcac
    26941 aatagaaagg aataatgaat gaaaatttta gttttaaatt cgggctcttc gtcgattaaa
    27001 tttaaatttt ttgatgataa aatcgttaag gcgagtggtt tagtagaaaa aatcgcagag
    27061 caaaattcaa aagttatatt aaaaaatact ttaaataatg aaaactttga aagagagtta
    27121 acgataaata atcatgaaga aggacttcgt atagtcaatg agctttttaa agaatcagga
    27181 attttagcag atttgaatgc tcttgatggc tgtggtcatc gtatagtgca tgggggagaa
    27241 attttaagcg agcattgttt ggtggatgat tatgttctta aagagataga cagggttagc
    27301 atttttgccc ctttacataa tcctgcgcat ttagcaggta taaaaacaat gattaaagcc
    27361 gcacctagtg ttgcgaatgt ggctattttt gatacagctt ttcatcgcac tatgcctgat
    27421 tttgcttata tgtatgcttt gccttatgat ttttatgata aacataatat cagaagatat
    27481 ggttttcatg ggacttctca tgcctttgtt agttctagag cagcaaattt gcttgaaaaa
    27541 gacaaaaatg aattaaatgt tatctctgct caccttggaa acggtgcaag tgtatgtgct
    27601 atagaaaagg gtaagagcgt agatacttct atgggattta ctccacttga agggcttgtt
    27661 atgggaacgc gttgtgggga tttagatcct gctattttgc cttttattag ccatcttaaa
    27721 ggtttaacca tagaagaaat agatacactg atgaataaaa aaagtggagt ttatggaatt
    27781 tgtggttata atgattttag agatatagaa agtcaaatag aacaaggtaa tgataaagca
    27841 cgcttggccc ttgatatgtt ttgctaccgt cttgtaaagt atataggagc ttattttgct
    27901 gtgttgccaa aaactgatgc tattattttt accggcggta taggagaaaa tgatagtttg
    27961 gttcgccaaa aagtatgcga gaaattagct catcttggta tcgagttaga ttttgaactt
    28021 aacaaacaaa gaattgcagg cgaaagaatg ataaatcatg caaattctga agttaaagta
    28081 cttgtcattc ctacagatga agagttagaa atcgctagaa ttacggaaga atttatcagt
    28141 aaaaactaaa atttaaaagc atataaatct ttattttgat ttatatggtt tttagcaatg
    28201 ctatatactc gctttgcttt tcattgataa tctcaatata agttaaaatc atcatcactt
    28261 aaaccataaa gttatttttc caataaatca ttttttgccc ttaggatatc ataggctttt
    28321 ttggtttctg gaatttcttt actttttaaa cgctcatcaa atttactttg tttaaagaat
    28381 aagtagtttg gctaaaattt gcatgcatct ttccttcata taaagacaaa agtccttctt
    28441 gaaattctat aaataaattt gttatattaa gctctcttct aaaatcaata taatcaaaag
    28501 atagggtttg aaatttttga tagcattttt tagaatttct aaggctcgct tgtcttttaa
    28561 tttcattaag gctaagtgaa tccgggctta gctttttgat atcttttaag cttgaggtta
    28621 aatctcctct ttgtttttaa tgaatttgta tctgttttat aaaatatagt tttgatttta
    28681 tgagttttgc ttagtggtgt gtttttataa gcataagagt aaatttatag cttttatgta
    28741 tatcggcaaa tatagcctct ctattttcaa aactataaaa atactccaag cttttctttt
    28801 ctaaatttct ttgcgtaaag ttaagttttc ttgtataatt tttcatccta atcttataaa
    28861 attccatctt aaattttcta atgcccttaa tacaaattca tcttcaaatt gatcttcatt
    28921 ttgttttttt aatttttctt tgtcataaat tttgtaattt tgtttaaaat atcttcaaag
    28981 gctttttggt tggttttgaa attataaatt ataggaaagt caatttctaa agaatagctt
    29041 gtgaaaagat tattattaag gtatttttaa agattttaca ttttaaatta tatctaagaa
    29101 aactttaaag acttgtgctt attttgggaa aatgattttt tagttggaat taattttctt
    29161 tagataaaat ttttaattaa aagataaagc gtggattatg aaaaaattta aagaatttag
    29221 tcttcatttt ttatttaaaa tatcagaaca acccgttatt ataaaagatt tactagaagc
    29281 aaatgcactt tttaatgacg gtatgcttgt agatccttct aagctaaatt ttaatttcaa
    29341 aattctaaat tcttatattt attttggtat tttttgtgct gtggttttgt tgccattgct
    29401 tttaatcact cattattttt taacaaagct cgattttcat ataagtatag taagtgctgt
    29461 tatggttact gcttgtgtgt ttataggata tgatattttt aaagtttata ctcgaaaaat
    29521 aatttcaaaa aaattaatac aaaaagcttg ggctttacat tttccttatt ttccttatga
    29581 gaaatattct gtaatggcgg gtgaatttta taaagaagct ttaaaagaag aaattccaaa
    29641 agcaaattta gagcagtatg ttttagataa gattatttat tctaaataat ctaaaatttg
    29701 attttgaaat cgcatatttt caagtcttct ttttaaatct ttattttctt catttaaaac
    29761 actttcttcc gttcttaatg tggcaatttc tctactaaga taataaattt ggtttctaat
    29821 gtaaatttgt ggagcaaata agaataatgc aaaactaaca agcaaggccg caaaaagaag
    29881 gtgattaaaa tttaaatttc tatcttcttt agtagcatta gaaaagcctt ccaataaaac
    29941 attttttgct ttttgggtat cttcgtcatt ttgttgtttt tcttgaattt gagtgggttg
    30001 ttttggaagt tcttgtttgt tttcttgtga tgttattttt ttttgtaaat tttctaaact
    30061 ttgtttgata tcaggttgat ttttaatgtc tggttttttt tctatagttt ggggtttttg
    30121 tattttaagt tcagtttttt gaattttttc tacagggttt ataggttctt ttttttcttt
    30181 tttagcttgg gtagaaattt gatcgttttt tgtttgaatt tgtggtttga tttgaatatt
    30241 ttttatttca tttgtttt
//
LOCUS       DAPWAA010000015        29659 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.015, whole genome shotgun sequence.
ACCESSION   DAPWAA010000015 DAPWAA010000000
VERSION     DAPWAA010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 29659)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29659)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29659
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.015"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..720)
                     /locus_tag="RTF91_000609"
     CDS             complement(<1..720)
                     /locus_tag="RTF91_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ4943524.1"
                     /translation="MKRKNIKFNNFVNSHKTLSLNRLFDFYSVFEGFKNLNILNFEED
                     IFVNIERILLDDYFEIKSYFALDETSSYALTLLAKNNRKRFSINRKIQHFKALSTLKY
                     LLETGIIKLEYSKEAKKIKDKRQKIKKELRSYVIQDKIMFSNHFTRFFFYFLKPNEKL
                     ILQNRYEEVLEYIKEKFELYQSFCFEQLSRELLEKKFNINGVQSYWDKNLELDLYYQD
                     ENLCFIGEVKFKNKKICKNILN"
     gene            763..2037
                     /locus_tag="RTF91_000610"
     CDS             763..2037
                     /locus_tag="RTF91_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HDZ4943525.1"
                     /translation="MYLQISDLKKELILKKGILHFDFTASALALKCVEKEITKILPTY
                     ANTHSDSSLNSFKTQQIYEQARKDIKKSLLLDENFALIACGTGSSSAIKKFQELLGVY
                     IPPLIKERYFEQIDKNTLPLVIVGPYEHHSNELSFREGLCECVRIPLDKNGEIDFDFL
                     EKTLQKNKKRKIIASFSLASNVTGILSDYKRISKMIRKFKGIVAFDASSFIPYKNIPC
                     QYYDALFISSHKLIGGIGGSGLLIIKKELCGNKPSFAAGGTVGYVSRTSQYYLCNEET
                     LEEGGTPGILQLIRASLAFKVKDSIGVKYIEKKEEILKDYFFEKLKTIPNLILYAKNL
                     KIRLPIFAFNIKGISPFDIAYELSKKYHIETRAGCACAGPYGHDLLGLKDNQKLKTKP
                     GWLRISLHYTHEKEDIDYFFNALNKTIAKLSH"
     gene            complement(2034..2858)
                     /gene="purU"
                     /locus_tag="RTF91_000611"
     CDS             complement(2034..2858)
                     /gene="purU"
                     /locus_tag="RTF91_000611"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDZ4943526.1"
                     /translation="MISVLKICTKDQKGLIYRISDVIFKYHINIVKNDEFVGEEMFFF
                     RALLEGEFDKEVFIGTLEAMLGQEALIELCEKRKKDIIVFVTKESHCLGDLLIKHYSN
                     ELEANIKAVVSNHNSLKDLVEKFEIPYHFITTENLDRKEQENQILKCLQYYKFDYLVL
                     AKYMRILSPDFVKHFEGKIINIHHSFLPAFIGANPYKQAFERGVKIIGATAHFVNNNL
                     DEGPIITQAVLPVNHEFTWQDMQQAGRNIEKDVLSKALDLAFEDRIFIYNNKTIIF"
     gene            complement(2855..3973)
                     /locus_tag="RTF91_000612"
     CDS             complement(2855..3973)
                     /locus_tag="RTF91_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HDZ4943527.1"
                     /translation="MQISKISLRNNPDLKFIADFLKPYTKRAYLVGGSVRDLFLGLKV
                     CDYDIELYDIKPNDFEKIMQKLGAQGFGKSFFVYKFKNYDLALARTENKTSYGHKGFE
                     VQICNDEKLGAKRRDFTINSMMINLFNDEFLDFYGGLKDLKAGFLRYIDKQSFQEDSL
                     RVLRAVVFASRFNFSITSESLNLMQSMSIKDLSKDRINAELYKFFKSPRLDVGYRYLQ
                     ELGLEKEIFGFESVFRSLEFQAFLKQSREFVKNDALFLYLYLNFFNLEKDIFFKKTKL
                     KKEYLKQAKQVFYFNHISDFELAKIAFEMPLKEWLGLWDEKRIEQAKRLRLYENRFES
                     KILAKDFINAGFCGKILGLKLQKARENELKEYIKGLAK"
     gene            complement(3942..4433)
                     /locus_tag="RTF91_000613"
     CDS             complement(3942..4433)
                     /locus_tag="RTF91_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate:acceptor oxidoreductase"
                     /protein_id="HDZ4943528.1"
                     /translation="MNLEDLAKKTISEVSSIMEEQRRQSEILKEQELSIKTEIKDELL
                     PMEFVCEELDATQELEDKISMAKFEEEQKMQNDIEISTQENKEFKKEEPFLQDEILNP
                     NVIAEVQTLNEDIFLKHLRERILVLFEGLNSIKKDELENRLNLTINFLEFLLANIEDK
                     LKK"
     gene            complement(4430..4675)
                     /locus_tag="RTF91_000614"
     CDS             complement(4430..4675)
                     /locus_tag="RTF91_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943529.1"
                     /translation="MKNTVTEASIYEAQGLKDEALEIYKNILKEDPHNQNAIDAVRRL
                     SGFRSKHTDLNTQMLDFFIHMKSDEEINEFKRWLIKI"
     gene            complement(4724..5302)
                     /locus_tag="RTF91_000615"
     CDS             complement(4724..5302)
                     /locus_tag="RTF91_000615"
                     /inference="COORDINATES: protein motif:HMM:NF013933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HDZ4943530.1"
                     /translation="MDYLLFIFTFACVSLLPGLCMNLAFSLGLSSGYKITLWMMFGEL
                     FGLGLIVVCCAFGAGFITQYEFLFKVFKICAALYLLYIAFNLFFAKTKISEEKISKKE
                     KLSLLLQGFITSASNPKAWIFILSIVPSFLKFNTNLFLLVFIILFIEFCSLSLYALGG
                     SLFKTFMNQHVTKLNKISALCVAVLGISMFFT"
     gene            complement(5311..5481)
                     /locus_tag="RTF91_000616"
     CDS             complement(5311..5481)
                     /locus_tag="RTF91_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943531.1"
                     /translation="MIFLIPLLIVIALIFGIDYLYFSNENKEVQKKEQKQDLNLDEKK
                     QEYLKELFKPKQ"
     gene            complement(5484..5819)
                     /locus_tag="RTF91_000617"
     CDS             complement(5484..5819)
                     /locus_tag="RTF91_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HDZ4943532.1"
                     /translation="MNNLSSVIILAKEEYVDDLKKAISEIPFCSVELCENEKIIVVIE
                     SENLEDELNSYKMLEKLPNIISINMVFSYQDLNDDMQKAINSGAIQTIEKNESAENVR
                     YFGSIYNQL"
     gene            complement(5812..6726)
                     /locus_tag="RTF91_000618"
     CDS             complement(5812..6726)
                     /locus_tag="RTF91_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HDZ4943533.1"
                     /translation="MKKILFILSFFCVLSYGYELKLNSNITALKFDKQNLYIGTDKGE
                     ILRYNIKDKSLKELLSLPKIKNYYDNNFAKIYNIDIFKNTLLILSEGDFGSKNLSFYK
                     DNLQIKKLEENSITKAFFINEDTYLLISIGSEIELIDKNLKNIKRFNFSHSSLNDAVL
                     SEDKNKLVVGFESGEVELFDLKNWKMLKNYDKMHKDNIYQVDFKNNIILSCGTDRRIG
                     IVKNEEQNFLQKNFLIYACALSPDGELAVYSDNEAGISEVFSTSDFKSIKTFNNENLM
                     SEFIIFLNNKDFIISGFGDSIMFRSTDE"
     gene            complement(6732..7253)
                     /locus_tag="RTF91_000619"
     CDS             complement(6732..7253)
                     /locus_tag="RTF91_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HDZ4943534.1"
                     /translation="MKKKLVLLGSAAVVFFAACTMNSGVSSEQIGLRKASLENENKVN
                     LVEANFTTLQPGESTRFERSYENAPPLIPHAIEDLLPITKDNNMCLSCHDKAVAADAG
                     ATPLPASHYYDFRHNKTTGDMISDSRFNCTQCHVPQSDAKPLVGNSFKPEFKNEQLKS
                     RSNLIDVINEGVK"
     gene            complement(7250..8035)
                     /gene="napH"
                     /locus_tag="RTF91_000620"
     CDS             complement(7250..8035)
                     /gene="napH"
                     /locus_tag="RTF91_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HDZ4943535.1"
                     /translation="MMKYLITRRIVQLGILALFSFKATDFILQGNLSSSRLFNTIPLS
                     DPFAVLQIILASWGIDLMALIGALIIFFVYGLLLGRVFCSWICPVNLITDFAVFVRNK
                     LALNNKFLILPKNLRYFVLALVLILSFVFSLPVFESFSYIGVIHRGIIFATSSWIFIA
                     FILFCIDTFLSPRAICSHFCPLGAFYALISRFALLKVKHNSDKCTKCYECIRVCPEKQ
                     VLWMVGKESTSVKSGECIRCARCIEVCNDDALNFNIFDLRNKR"
     gene            complement(8032..8772)
                     /gene="napG"
                     /locus_tag="RTF91_000621"
     CDS             complement(8032..8772)
                     /gene="napG"
                     /locus_tag="RTF91_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HDZ4943536.1"
                     /translation="MKDRREFFVSAFKAVCLCTGGGFLANLALKADDNYALRPPGAED
                     EARFLSKCIRCGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIREC
                     PTDALDKKHLEQGIESLKMGIAIVDSASCVAHWGIQCDACYRACPLIDRALKLELKRN
                     ERTAKHAFLLPSVDHEVCVGCGLCELACITEKPAIRVLPREYVLGKAGSHYVKGWDEK
                     DEDRIKNADTSKHFDVKKATNYLNDGEL"
     gene            complement(8790..11564)
                     /gene="napA"
                     /locus_tag="RTF91_000622"
     CDS             complement(8790..11564)
                     /gene="napA"
                     /locus_tag="RTF91_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HDZ4943537.1"
                     /translation="MNRRDFIKNTAIASAASVAGISVPSSMLGAQEEDWKWDKAVCRF
                     CGTGCGIMIARKDGKIVATKGDPAAPVNRGLNCIKGYFNAKIMYGEDRLVMPLLRMNE
                     KGEFDKKGKFQQVSWQRAFDEMEKQFKKAYNELGVTGIGIFGSGQYTVQEGYAALKLA
                     KAGFRTNNIDPNARHCMASAVVGFMQTFGVDEPSGCYDDIELTDTIITWGANMAEMHP
                     ILWSRVSDRKLSNLDKVKVVNLSTFSNRTSNIADIEIIFKPNTDLAIWNYIAREIVYN
                     HPEAMDMKFIKDHCVFATGYADIGYGMRNNPNHPKFKESEKDTVEKENVITLDDEEAT
                     SLSYLGVKAGDKFEMKHQGVADKNWEISFEEFKKGLAPYTLEYTAKVAKGDDDESLED
                     FKKKLQELANLYIEKNRKVVSFWTMGFNQHTRGSWINEQAYMVHFLLGKQAKPGSGAF
                     SLTGQPSACGTAREVGTFSHRLPADMVVANPKHREISEKIWKVPAKTINPKPGSPYLS
                     IMRDLEDGKIKFAWVQVNNPWQNTANANHWIAAARDMDNFIVVSDCYPGISAKVADLI
                     LPSAMIYEKWGAYGNAERRTQHWKQQVLPVGAAMSDTWQILEFAKRFKLKEVWKEQKV
                     DNKLTLPSVLEEAKAMGYSEDDTLFDVLFANKEAKSFNPNDAITKGFDNTDVKGDERK
                     IQGSDGEEFTGYGFFVQKYLWEEYRKFGLGHGHDLADFDTYHKVRGLRWPVVNGKETQ
                     WRFNTKFDYYAKKAAPNSDFAFYGDFNKMLTNGDLIAPKDEKEHSIKNKAKIFFRPFM
                     KAPERPSTEYPFWLATGRVLEHWHSGTMTMRVPELYRAVPEALCYMSEKDGEKLGLNQ
                     GDLVWVESRRGKVKARVDMRGRNKPPVGLVYVPWFDENVYINKVTLDATCPLSKQTDF
                     KKCAVKIYKA"
     gene            complement(11817..12344)
                     /gene="tpx"
                     /locus_tag="RTF91_000623"
     CDS             complement(11817..12344)
                     /gene="tpx"
                     /locus_tag="RTF91_000623"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDZ4943538.1"
                     /translation="MSTVNFKGSPVKLKGNSVEVGVDAPKVNIKAKDLSVIEIGTGGK
                     TQIVLSVPSLDTPVCATEAREFNKKVASYNGAEVIIVSMDLPFAMGRFCSTEGIENLS
                     VASDFVAKEFGEKYGVLISEGALEGLLARAVFVIKDGKIAYKELVNEITEMPDIAKLD
                     AFFSGSSCCGGCGCH"
     gene            complement(12442..13182)
                     /gene="peb2"
                     /locus_tag="RTF91_000624"
     CDS             complement(12442..13182)
                     /gene="peb2"
                     /locus_tag="RTF91_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family adhesin PEB2"
                     /protein_id="HDZ4943539.1"
                     /translation="MKKILILSLAAASFLNAEILVYGPGGPAPVLKELALKFEEKTKE
                     KVIITAGPAPAWIDKAKENADLIFSGNTSMMDDFAKKIPSLSLENLSVLNVRPSGIIV
                     RPNNPKNIKNFEDILKDGVNVMVVDGAGQVGLYEDMALKSAKRENLVKLRKNIKIYAK
                     NSKAAVDEWNNNPNIDALIIWSHWAKALGDDKALFIKDKKAVIYRAAEIAPTKKGLEN
                     KKALEFVNFIKSKEAQKVWKKYTWKEVK"
     gene            complement(13224..15254)
                     /locus_tag="RTF91_000625"
     CDS             complement(13224..15254)
                     /locus_tag="RTF91_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HDZ4943540.1"
                     /translation="MPLSKLNNEQYLAATADFGHNLVIASAGTGKTSTIVARISYLLS
                     KGIAPQKIMLLTFTNKASKEMIGRLGKFFDKNITSKIFAGTFHSMAYTLLRNADKNIA
                     LKQASELKTLLRSVYEKRTFRHLSDIKPYQPSYLYDLYSLFQNKAHNQDFYTWFCQNY
                     EDQSIYAEIYEDVLKEYDNEKKRFNYVDFNDLLINLKELLKEEKYEFDEILVDEYQDT
                     NTLQSSLIEAFHSKSLFCVGDYDQSIYAFNGADINIIGGFKDRFKDAQIFSLNKNYRS
                     SRSILALANKVILNNERLYPKELIVTRNDEFKAPSLLTFEELFDQYQNIAKIILTSGV
                     NLEEIAVIFRNNSSADGIEVALREQGIASVRKGSGSFFESLEVKAFSAMLALVVNPKD
                     IMAFIHLVQYTKGVGGVLAKEIFDALLKLGHGNLIKGFLGPDRGVNLQNHQKRNYQLG
                     LFEDLEELASETRFKFDSEFDAHPILRLSKISDLCAKNLEKIYLFLKKAMELKHSLAL
                     VNLICENSFYREICEELATKRATNKAGQIDLLRKSENLEKIETKFNVLKELTKNYSDI
                     YKYYNFLTLGASEMSSGKGVNLLSVHASKGLEFDLVFVIDLAQGRFPNQKLIGMGGSL
                     EEERRLFYVAVTRAKNILYLSYAKYDKNKKTSFAPSRFLIEAGLCKGELTID"
     gene            15383..16396
                     /locus_tag="RTF91_000626"
     CDS             15383..16396
                     /locus_tag="RTF91_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943541.1"
                     /translation="MNLKIFSIIVGILIAIAAILGGTYYYLFEYSKPKNYTLNTSTYT
                     EQKSYANNYDNSYSSSNQTNNNSSDANINNNIIQKQEINLSNENRSLSNNTFNTTINE
                     NNQSLNDNNITNNVNTNENKQNLSTDKEKLKRENKQAKIESLKKEINKHQKILEREKA
                     VKKELQSDKSNKNKYLNTAREYLSIGKNSRLEPELSTENMKVYVLDGKFLSQYRIDLL
                     KDMLSVIQDNAKDYYLSIFVKMLPKGEMKLTIYNKEIIFSDMKKAYKYISLDRLSPYL
                     NNPKELNEHVAREEILERLKFQIKKDGKGSDFSKHIKSLKTGLNAAQYFFPFCEIIEI
                     SSI"
     gene            16422..19034
                     /locus_tag="RTF91_000627"
     CDS             16422..19034
                     /locus_tag="RTF91_000627"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDZ4943542.1"
                     /translation="MYDKNLEKEYYQICEKRGYFEIDGNKAIQEENKNFCIMMPPPNV
                     TGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNVVEKQLLSQGIKKE
                     ELGRKKFIEKVWEWKEQSSGKILDQMRTLGITPAWSRLRFSMDEGLVNAVKKAFIELY
                     DKGLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYYIKYFLKDSDEFLIVATTRPET
                     FFGDTAVMVHPDDERYAKFVGKQVILPISKKAIKIITDEHVEKEFGTGVVKVTPAHDM
                     NDYEVGLRHNLEFISVFNEKGILNEHCLEFQGLERLEAREKIVAKLKNLGFIEKIEEH
                     NNQVGYCYRCNNIVEPYISKQWFVKKEIAQESIEKVALGESKFYPNHWINSFNAWMKD
                     LKDWCISRQLWWGHQIPVYYCECLHEWASQNTPKSCPKCQSQNFKQDEDVLDTWFSSG
                     LWAMSTLGWGNENWGKDKIWSKNDLKDFYPNSLLITGFDILFFWVARMMFQSTNALHQ
                     LPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSTDILRFTLALLAIQGRDIKL
                     SNDKLLQVRNFTNKIYNAANYLLLNESKFEDLENIVLQSELAKYIYVKFQTCVKDVRE
                     NLDNYRFNDAANTLYKFFWDDFCDWGIELSKAEKSSVKELGSIFKEALKLLNPFMPFI
                     SEYLYHKLSNTDLKTSPSIMISKYPKFKEQDKNIEKIFSLLIESIVGIRRAKSLIDLG
                     NSKIEKAYIKFNDKKVKDEIKAYMNFIMMLAKCEQIEFSEEKLPKAICDVSENLEIFI
                     TLKNVDLSGILTRLENQKNKLEKESFKLSSMLSNEKFIANAPKEVVEQNKEALENLKI
                     QLEKISVELQNLRG"
     gene            19039..20049
                     /locus_tag="RTF91_000628"
     CDS             19039..20049
                     /locus_tag="RTF91_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943543.1"
                     /translation="MIKIKNLKKYYSKELVINDVSLEIKKGEIYAIVGHSGAGKSTLL
                     RCINGLENYQEGSLKVFDQEIKDLSQKKTKELRVLRKDIGMIFQNFALMERKNVFENV
                     AMPLKTHYTQCKFHAKLFGKEYMSEKEIAQKVNSLLEIVGLDHKNKAYPRELSGGQKQ
                     RVAIARALALNPKILLSDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVK
                     DIAQKALLLEHGQIIGSGAIDELFLRPNAKMKEFLGESDFLPEHGLNIKLYFPKEVAQ
                     NSVITHMARTLNIDFNIVWGKIEKLNGKALGNLVININEKDKGKVLDYIEKSGVLWEV
                     AS"
     gene            20046..20957
                     /locus_tag="RTF91_000629"
     CDS             20046..20957
                     /locus_tag="RTF91_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ4943544.1"
                     /translation="MNEENTSIISAFFGRISQFFNEFSWQDIKEVSLNSITSFSENYE
                     NILKPAFNETIYMSLMAVLFGFLLSIIPGILLAIWGKNGIKENKIAYSILDFITNILR
                     AFPFLILIVVLLPLSKIIVGTSIGTNAAIVPLAIGIAPYLAKMLESAFKEIDKGIIEA
                     AKSYGASNIQIIFKVIFSEALPAIISGITLTLIFTIGFSALAGTVGGGGLGDVAIRYG
                     YERFNKEVMIQTVIILLILVQLVQILGNLFYTWAKNSKTTYIIVTLLILLAVSIIINI
                     NNDENFFWQAIVFILLLVSLLYKSFKK"
     gene            21151..21924
                     /locus_tag="RTF91_000630"
     CDS             21151..21924
                     /locus_tag="RTF91_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDZ4943545.1"
                     /translation="MKIKSLFIASILTLSLNANALETITVAATPVPHAEILEQIKPDL
                     EKQGYKLEIKEFTDYVLPNLAVDNGEADANFFQHTPYLEEFNKNKGTKLTKVAAIHIE
                     PMAVYSKKYKNLDDIKEGVKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDIVD
                     NPKKIQFVELKPAQLPRALDDVDFAVINSNYALSANLNPAKDGVFIEDKESPYANILV
                     VRVGHENDPKIKALIQTLQSDKIKQFIIEKYNGSVLPAF"
     gene            21975..22745
                     /locus_tag="RTF91_000631"
     CDS             21975..22745
                     /locus_tag="RTF91_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDZ4943546.1"
                     /translation="MKLFKIITLACILNLSSTFAQSITIGATPNPFGSLLELMKDDFK
                     NKGYELKIVEFSDYILPNRALEEKELDANLYQHKLFLEEYNLKKGSNLIATTPVLIAP
                     VGIYSKKIKNLENLKEGARVAIPNDPTNESRALELLEKAKLIELNKNTLKTPLDISKN
                     PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTVFREDKNSPYVNYVVV
                     RLEDKNSEKTKVIDEILRSDKFKTIINEHYKDILIPAF"
     gene            22754..23530
                     /locus_tag="RTF91_000632"
     CDS             22754..23530
                     /locus_tag="RTF91_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDZ4943547.1"
                     /translation="MNIKKIFLSVLFAISLSFGADKTITIGATPTPYAEILNFSKPLF
                     QEKGWKLVVKEFNDYNIPNIALNEKDLDANLYQHKPFLDDFNTHKGTKIASLGAIVLV
                     PMAIYSNSIKDIKDIPNGAKIAIPNDATNESRALDLLAKADLIAFKTQNTLKTPLDIS
                     KNPKKLKFIELKAAQLPRALDDVNLAVITTNYALGAGLNPLKDGIFIEDKDSLYAIVL
                     ATRKGEETSQKSLVIKEILTSDKIKNFIIEKYEGSVIPTF"
     gene            23612..24274
                     /gene="flgA"
                     /locus_tag="RTF91_000633"
     CDS             23612..24274
                     /gene="flgA"
                     /locus_tag="RTF91_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HDZ4943548.1"
                     /translation="MKIILLSFFIMINCIQGATLEEIKTALGKEFANNFPKIIISQID
                     LKITSLPKDFDQYEFLRIANGRFNQAQGFLRAEFKTPQNIQKNVFFRYFIQANLEVLK
                     SERAIKRGDKLGTFDYKSVLIDFDKVPSNALTLDDVNNLIAKSNINKNTILRANMFKT
                     TALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKEGRVMQGIVVGKNRMI
                     IQ"
     gene            24271..24834
                     /locus_tag="RTF91_000634"
     CDS             24271..24834
                     /locus_tag="RTF91_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HDZ4943549.1"
                     /translation="MKILLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLSFKAE
                     NQATLEQICQENFKNTHFLDDKNLSLNVASGSFGIEKTIIAPCSISSLAKIHAGFADT
                     LLMRAAAVALKERKKLILGVREMPFSILNLEHMLKLSQMGAIIAPPIIASYSQANNLE
                     QMESFIIGKWLDLLEIKHDLYKKWQNF"
     gene            24874..25338
                     /gene="coaD"
                     /locus_tag="RTF91_000635"
     CDS             24874..25338
                     /gene="coaD"
                     /locus_tag="RTF91_000635"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDZ4943550.1"
                     /translation="MTCLYPGTFDPITNGHLDVIKRALKIFDEVIIAIAKSEHKKPFY
                     DLEKRKELALLATQNLNNIKIIAFDNLLVDLAKELKVNTIIRGLRAVSDFEYELQIGY
                     ANHALWEDIETIYLMPSLKHAFISSSIVRSIVAHGGDVSSLVSKEILPFLKD"
     gene            25341..25916
                     /locus_tag="RTF91_000636"
     CDS             25341..25916
                     /locus_tag="RTF91_000636"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDZ4943551.1"
                     /translation="MYIVFEGIDCVGKSTQISLLKKIYKDAVFTLEPGGTELGKHLRE
                     ILLNKTYPINKRTELLLFLADRAQHFEEVLKDNQNKLIISDRSFISGMAYAKDFENDL
                     LFTLNSFALDNFFPQKVIFLKGDEKLIKERLNQKELDNIEKRGIEYFLSVQDKLEKIL
                     KFLKEKISIEILTLDAKESKENLHQQIKEFL"
     gene            25916..27142
                     /locus_tag="RTF91_000637"
     CDS             25916..27142
                     /locus_tag="RTF91_000637"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDZ4943552.1"
                     /translation="MINALKGMKDLLDKDAYYYEKVVKTCEEIAKNYGFTFINTPHLE
                     LCSLFKRSVGESSDIVGKEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKMDKSNTVKR
                     WFYHGSMFRYERPQKGRLREFHQFGVESFGNASIYEDASIILMLVEIFSRLNIKFKLL
                     INSLGCLECMPKYRENLIHFLDTKEGFCEDCLRRKSLNPIRVLDCKKEHCQSLLQDVP
                     LLNQNLCSSCKKDFEILQSVLKENGVNFEIDSKLVRGLDYYSKTAFEFISDEIGAKAA
                     IAGGGRYDRLIEYLDGKNGFGVGFAMGIERIIAILEQKEEKLEREGIYLCAMDEIYIH
                     KLLNIATNLRKKYKVLLSYEARKLAKHLENADKNNAEIFLCMGENEAQNESLFYKNLA
                     KKEEKMIKISDLEKVL"
     gene            27139..28974
                     /gene="speA"
                     /locus_tag="RTF91_000638"
     CDS             27139..28974
                     /gene="speA"
                     /locus_tag="RTF91_000638"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HDZ4943553.1"
                     /translation="MMDYGIDIWGNENFIIKNGKVCINHEKKPAIIDIVKELRDDGYK
                     GPLLLRFPHFIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGK
                     DYNYGLEAGSKAELLLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGL
                     NELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGIYSKFGLTSTELIEAVNLL
                     KENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLA
                     VEYSQFKNEKNRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIA
                     PVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLF
                     DLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSI
                     PDFWGLEQNFPIMPLDHLDEEPTRSASIWDITCDSDGEISYSKDNPLFLHDVDVEKEN
                     YFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEIEGIIEAQSILDALEDLDYD
                     IHAIMNILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV"
     gene            28975..29607
                     /gene="cysE"
                     /locus_tag="RTF91_000639"
     CDS             28975..29607
                     /gene="cysE"
                     /locus_tag="RTF91_000639"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDZ4943554.1"
                     /translation="MNFWGIIKEDFSQPKVQDPAFGSCVELFFNYPGVWAVVNYRFAH
                     FFYIRNFKRIARTISGISQFLTGVDLHPGAKLGRRVFIDHANGVVIGQTAVIEDDVLI
                     YQGVTLGGTSLEKGIKRHPTIKKGVIIGSGAKILGNIIIGENAKIGSNAVVVKDVGAN
                     LTAVGIPAYIIEERKNKNIRAIDANCEDKLEKLEKKILELENLVLKQFKS"
BASE COUNT        10811 a         4784 c         4158 g         9906 t
ORIGIN      
        1 atttaaaata tttttacaaa tttttttatt tttaaattta acttctccga taaaacacaa
       61 attttcatct tgatagtaaa gatctaactc taaattctta tcccaataac tttgcactcc
      121 attgatattg aattttttct caagtaactc cctagaaagt tgctcaaaac aaaaactttg
      181 ataaagttca aatttttctt taatatattc taaaacttct tcataacgat tttgcaaaat
      241 aagcttttca ttgggcttta gaaaataaaa aaagaaacga gtaaaatggt tgctaaacat
      301 aatcttatct tggatcacat aagatcttaa ttctttttta attttttgtc ttttatcttt
      361 tattttttta gcttccttgc tatactcaag ctttataata cctgtttcca aaagatattt
      421 aagtgtagat aaagctttaa aatgctgaat ttttctattg atagaaaaac gcttacgatt
      481 gtttttagct agcaaagtaa gagcataaga acttgtttca tctaaggcaa aataactttt
      541 aatttcaaaa taatcatcaa gcaaaattcg ctctatattt acaaatatat cttcttcaaa
      601 atttaaaatg tttaaatttt taaaaccttc aaacacacta taaaaatcaa aaagcctatt
      661 taaagataaa gtcttatgtg aatttacaaa gttgttaaat tttatatttt tcctttttat
      721 aaagcatttt ttatagtata attttagcaa attttcaaag gattgtattt gcaaatttcg
      781 gatttaaaaa aagaattaat cttaaaaaaa ggtattttac attttgactt tacagcaagt
      841 gccttagctc taaaatgtgt agaaaaagaa attacaaaaa ttcttccaac ctatgcaaac
      901 acacattctg atagctcttt aaattctttc aaaactcaac aaatttatga acaagcaaga
      961 aaagatataa aaaaaagttt attattggat gaaaattttg ctcttatagc ttgtggcacg
     1021 ggatcaagta gtgctatcaa gaaattccaa gagttgcttg gagtttacat tcctcctctt
     1081 ataaaagaaa gatattttga gcaaattgat aaaaacactt tgcctttggt tatcgtagga
     1141 ccttatgaac atcattctaa cgaactttcg tttcgagaag gcttgtgtga atgcgttaga
     1201 attcctttgg ataaaaatgg agagattgat tttgattttt tagaaaaaac cttacaaaaa
     1261 aacaaaaaaa ggaaaataat cgctagcttt tctttagctt caaatgttac tggtatatta
     1321 agtgattata aacgcatttc taaaatgata cgtaaattta aagggatagt tgcttttgat
     1381 gcgtctagtt tcatccctta taaaaacata ccttgccaat actatgatgc gttatttata
     1441 agctctcata aattaatcgg cggcattggt ggatctggac ttctgattat caaaaaagaa
     1501 ctttgcggaa acaaacctag ttttgctgca ggtggaactg taggctatgt ttctcgcact
     1561 tcacaatatt atctttgcaa tgaagaaacc ttggaagaag gaggaacgcc tggaatttta
     1621 caacttattc gcgctagctt ggcctttaaa gtcaaagatt ctataggagt taaatatata
     1681 gaaaaaaaag aagaaattct aaaagattat ttttttgaaa aactaaaaac aatacctaat
     1741 ttaattttat atgcaaagaa tttaaaaatc cgattgccta tttttgcttt taatatcaag
     1801 gggatttctc cttttgacat cgcttatgaa cttagcaaaa aataccatat agaaacacgt
     1861 gcaggatgtg cttgtgccgg gccttatgga cacgatttgc taggattaaa agacaaccaa
     1921 aaactcaaaa caaagccagg ttggctaaga ataagcctgc attatacgca tgaaaaagaa
     1981 gatattgatt atttttttaa tgccttaaat aaaaccatag caaaattgtc gcattaaaat
     2041 attatagttt tgttattata tataaaaatt ctatcttcaa aagctaaatc aagcgctttt
     2101 gaaagaacat ctttttctat atttctacct gcttgttgca tatcttgcca agtaaattca
     2161 tgatttacag gtaaaacagc ttgagttata ataggccctt catcaagatt attatttaca
     2221 aaatgtgctg tagctccaat tattttaacc cctctttcaa aagcttgctt ataaggattt
     2281 gcccctataa atgcgggtaa gaaagaatga tgaatattta taatcttacc ttcaaaatgt
     2341 ttaacaaaat caggagataa aattcgcata tattttgcca aaactaaata gtcaaattta
     2401 tagtattgaa ggcattttaa aatctgattt tcttgttctt tacgatctaa attttcagta
     2461 gtgataaaat gataaggaat ttcaaatttt tcaactaaat cttttaaaga gttatgattt
     2521 gaaaccacag ctttgatatt tgcttcaagt tcgttgctat aatgctttat tagcaaatct
     2581 cccaaacaat gactttcttt agtaacaaaa acgataatat ctttttttct tttttcacaa
     2641 agctcaatca aggcttcttg tccaagcatg gcttcaagag ttccaataaa tacttcttta
     2701 tcaaattcac cttctaaaag agcacgaaaa aaaaacattt cttcacctac aaattcatca
     2761 ttttttacta tattgatatg atatttaaaa ataacatcag aaattctata aatcaaacct
     2821 ttttgatctt tggtgcaaat ttttaacaca gaaatcattt agctaaacct tttatatatt
     2881 cttttagttc attctctctt gctttttgaa gctttaaacc aagaatttta ccacaaaatc
     2941 cagcatttat aaaatctttt gctaaaattt tactttcaaa cctattttca taaagtctta
     3001 atcttttagc ttgctcgata cgcttttcat cccaaagtcc aagccattcc tttaaaggca
     3061 tttcaaaagc aatttttgct aactcaaaat cacttatatg attaaagtaa aaaacttgtt
     3121 ttgcttgttt tagatattct tttttaagct tagttttttt gaaaaatata tccttttcta
     3181 aattaaaaaa attcaaatac aaatacaaaa ataaagcatc attttttaca aattctctac
     3241 tttgtttgag aaaagcttga aattccagac tcctaaaaac actctcaaag ccaaaaatct
     3301 ctttttctaa accaagttct tgcaaatatc tataacccac atcaagccta ggacttttaa
     3361 aaaatttata aagctctgca ttgattctat ccttactaag atcttttata ctcatacttt
     3421 gcatcaagtt taagctttca ctagttatgc taaagttaaa tcttgaagca aatactactg
     3481 ctcttaatac tcttaaactg tcctcttgaa aactttgttt atcaatatat cttaaaaaac
     3541 ctgcttttaa atcttttaat cctccataaa aatccaaaaa ctcatcatta aaaagattaa
     3601 tcatcataga atttatggta aaatcacgtc ttttggctcc aagtttttca tcattgcaaa
     3661 tttgaacttc aaaaccttta tggccgtagc ttgttttatt ttcagttcta gcaagggcta
     3721 aatcatagtt tttaaattta tacacaaaaa aactttttcc aaagccctgt gcacctaatt
     3781 tttgcatgat cttttcaaaa tcattaggtt ttatatcgta aagttctata tcataatcac
     3841 aaacttttaa gcctaaaaac aaatccctaa cactacctcc aaccaaatat gctcgtttgg
     3901 tgtaaggttt taaaaaatca gcaataaact ttaaatcagg attatttctt aagcttatct
     3961 tcgatatttg caagtaaaaa ctctaaaaaa tttatagtca agttcaacct attttcaagc
     4021 tcatcttttt ttatactatt taaaccttca aaaagaacta aaattctctc tctaagatgt
     4081 tttaaaaaaa tatcttcatt gagtgtttga acttctgcta taacattagg atttaaaatt
     4141 tcatcttgca aaaaaggctc ttctttttta aattctttat tttcctgagt agaaatttca
     4201 atatcatttt gcattttttg ttcttcttca aattttgcca tagaaatttt atcttctaat
     4261 tcttgcgtag catcaagctc ttcacataca aactccatag gtagcaattc atcttttatc
     4321 tcagttttta tgcttagctc ttgttctttt aaaatttcac tttgccttct ttgttcttcc
     4381 atgatagaac taacttcgct aatggttttt ttagccaaat cttctaaatt catattttta
     4441 tcaaccacct tttaaattca ttaatttctt catcactttt catatgaata aaaaaatcta
     4501 acatttgagt atttaaatct gtatgcttag accgaaaacc actcaatcgt cgcactgcgt
     4561 caatagcatt ttgattatgc gggtcttctt ttaagatatt tttataaatt tctaaagcct
     4621 catctttaag cccttgtgct tcataaatag aagcttccgt aacggtattt ttcatctatt
     4681 gtcctaaaat attttttcaa ttttaacaaa aaacatctta tctttaagta aaaaacatac
     4741 taatacctaa aaccgccaca cacaaggcgc taattttatt aagcttagtt acatgctgat
     4801 tcataaaagt cttaaacaaa cttcctccta aagcataaag acttaaagag caaaattcta
     4861 tgaataaaat aataaaaact aaaagaaata aattggtatt aaatttcaaa aaagaaggga
     4921 caatagaaag tataaaaatc caagccttag ggttggaagc ggaagttata aaaccctgta
     4981 aaagcaagga taatttttct ttttttgaaa ttttttcttc actaatttta gttttagcaa
     5041 aaaacaaatt aaacgctata tacaaaagat acaaagcggc acaaatttta aaaactttga
     5101 ataaaaactc atactgggtg ataaaaccgg ctccaaaggc acaacacaca actatcaagc
     5161 ctaaaccaaa aagctcacca aacatcatcc ataaggtaat tttatatccc gagctcaagc
     5221 caagcgaaaa agctaaattc atacacagac ccggtaacaa tgaaacacaa gcaaaagtaa
     5281 aaataaacaa taaataatcc aaattttccc ctattgtttt ggtttaaaaa gctcttttaa
     5341 atattcctgc tttttttcat ctaaatttaa atcctgcttt tgctcctttt tttgcacttc
     5401 tttgttttca ttgctaaaat ataaataatc tataccaaaa ataagggcta taacgatcaa
     5461 taaaggaatt aaaaaaatca taattaaagc tggttataga tactaccaaa ataacggaca
     5521 ttctcagcac tttcattttt ttctatcgtt tgtatcgcac cactattgat tgctttttgc
     5581 atatcatcat ttaagtcttg ataagaaaaa accatattaa tactgataat atttggtagt
     5641 ttttcaagca ttttataaga atttaattca tcttctaaat tttcactttc aattacaact
     5701 ataatctttt cattttcaca aagctctaca gaacaaaaag gaatttcaga aatagccttt
     5761 tttaaatcat ctacatattc ttcttttgct aaaataatga cactagaaag attattcatc
     5821 ggtactccta aacattatac tatcaccaaa acccgaaatg ataaaatctt tattatttaa
     5881 aaaaataata aactcactca ttaaattttc attgttaaaa gttttgatag atttaaaatc
     5941 acttgtgcta aaaacttcgc taattccagc ttcattatca ctataaacag ctagctctcc
     6001 atcaggactt aaagcacaag catatatcaa aaagtttttt tgtaaaaaat tttgctcttc
     6061 gttttttaca attcctatac gtctatccgt tccacaactt aaaataatat tatttttaaa
     6121 atctacttga taaatattat ctttatgcat tttatcataa ttttttagca ttttccaatt
     6181 tttcaaatca aaaagctcca cttcgccgct ctcaaaacct acaactagct tgttcttatc
     6241 ttcacttaag actgcatcat taagactaga atgagaaaaa ttaaatcttt ttatattttt
     6301 taaattttta tcaatcaatt ctatttcaga accaatggaa atcaaaagat aagtatcctc
     6361 attgataaaa aatgcttttg ttatgctatt ttcttcaagc tttttaattt gtaaattatc
     6421 tttataaaaa cttaaatttt tagaaccaaa atcaccttca ctaagtatta aaagtgtgtt
     6481 tttaaaaata tcaatattat aaattttggc aaaattattg tcgtaataat ttttaatttt
     6541 tggcaaagat aaaagttctt ttaaactttt atctttaatg ttatatcgta aaatttcacc
     6601 tttatcagta cctatataca agttttgctt atcaaatttt aaagctgtta tatttgaatt
     6661 taatttcagt tcataaccat aagacaaaac acaaaaaaaa ctcaaaataa aaagaatttt
     6721 tttcatttat tttactttac accctcattg atcacatcaa ttaaatttga acgacttttt
     6781 aattgttcat ttttaaattc aggtttaaag ctatttccca ctaaaggttt tgcatcactt
     6841 tgcggaacgt gacactgggt gcaattaaaa cgactatcac taatcatatc tcctgtagtt
     6901 ttattatgtc taaaatcata ataatgactt gcaggaagtg gagttgcacc agcatctgct
     6961 gctacagcct tatcatgaca acttaaacac atattattat ctttagttat aggcaataaa
     7021 tcttcaatag catgtgggat taatggcggt gcattttcat aagaacgctc aaaacgagta
     7081 gattctccag gctgcaaagt tgtgaaattt gcttccacta aatttacttt attttcattt
     7141 tccaaacttg cttttctaag tccaatctgt tctgaactta ctccactatt cattgtacaa
     7201 gcagcaaaaa atactactgc agcactccct aataaaacca atttcttctt catcttttat
     7261 tccttaaatc aaaaatatta aaattcaaag catcatcatt acaaacttct atgcatcttg
     7321 cacaccttat acactctcct gatttcacac tagtactttc ttttccaacc atccataaaa
     7381 cctgtttttc aggacaaaca cggatacatt cgtaacattt agtgcatttg tcgctattat
     7441 gctttacctt aagcaaggca aaacgagaaa taagagcata aaaagctcct aatggacaaa
     7501 aatgcgagca aattgctcta ggacttaaaa aagtatcaat gcaaaaaagt ataaaggcta
     7561 taaaaatcca agaacttgta gcaaaaataa tccccctatg tattactcct atataagaaa
     7621 aactttcaaa cacaggcaat gaaaatacaa aagaaaggat taaaaccaag gctaatacaa
     7681 aatagcgtaa atttttaggc aaaattaaaa atttattatt aagagctaat ttatttcgca
     7741 caaagacagc aaaatctgtg attaaattaa caggacaaat ccaagagcaa aaaaccctcc
     7801 ctaaaagcaa gccataaaca aaaaatataa tcaaagctcc tattaaagcc attaaatcta
     7861 taccccagct tgctaaaatg atttgcaaaa cagcaaaagg atcacttaaa ggtatagtat
     7921 taaaaagcct agaagagctt aaattaccct gcaagataaa atctgtagct ttaaaactaa
     7981 aaagcgctaa aattccaagc tgaacgatgc gtctagtgat taagtatttc atcacaattc
     8041 tccatcattt agataatttg ttgccttttt aacatcaaaa tgttttgaag tatctgcatt
     8101 ttttatacga tcttcatctt tttcatccca accttttaca taatgcgaac ctgcttttcc
     8161 taatacatac tctcttggca aaacacgaat agcaggcttt tcagtaatac aagcaagctc
     8221 acaaagcccg caacctacgc acacttcatg atctacacta ggcaataaaa aagcgtgctt
     8281 ggctgtgcgt tcattacgtt taagctcaag ctttaaagct ctatctatca aaggacaagc
     8341 tcgataacaa gcatcacatt gaatccccca atgtgccaca caagaagcac tatcaacaat
     8401 agcaatgccc attttcaaag attctatgcc ctgttctaaa tgctttttat ctaaagcatc
     8461 agttggacat tctctaatac aaggaatatc cttacaaaga taacaaggaa tttccctagc
     8521 cttaaaaaaa ggtgtgccat tctttggact atctaataag ctagcaagct ttaaagtatc
     8581 ataaggacag gcttttacac aaagtccaca acgaatacac ttgcttaaaa atctcgcctc
     8641 atcttcagcc ccaggaggac gcaaagcata attatcatca gcttttaaag ccaaattagc
     8701 caaaaacccg cctcctgtgc acaaacacac agctttaaag gcactaacga aaaattctct
     8761 tctgtctttc attcaactaa aaccttaaat caagccttat aaatttttac tgcacatttt
     8821 ttaaagtcgg tttgctttga aagtggacaa gttgcatcca atgtgacttt gttaatatac
     8881 acattctcat caaaccatgg cacatataca agtcctacag gtggtttatt tcttccacgc
     8941 atatctaccc ttgcttttac tttaccgcga cgagattcca cccaaaccaa atctccttga
     9001 ttcaaaccta atttttctcc atctttctca ctcatataac aaagtgcttc aggcacggca
     9061 cgataaagtt caggcacacg catagtcata gttccactat gccaatgctc taaaaccctt
     9121 cctgttgcaa gccagaatgg atactctgta cttggtcttt caggtgcttt cataaatggt
     9181 ctaaagaaaa ttttagcttt atttttaata ctatgctctt tttcatcttt aggggctatt
     9241 aaatctccat ttgtaagcat tttgttaaaa tctccataga aagcaaaatc tgaatttgga
     9301 gctgcttttt tagcataata atcaaattta gtattaaatc tccactgtgt ttctttacca
     9361 ttaactacag gccatcttaa gcctcttact ttatgataag tatcaaaatc cgctaaatcg
     9421 tgaccatgtc ctaagccaaa tttgcgatat tcttcccaaa ggtatttttg aacgaaaaag
     9481 ccataacctg taaattcttc tccatcgcta ccttgaattt ttctctcatc acctttaaca
     9541 tcggtattat cgaaaccttt tgtgatagcg tcgtttggat taaaactttt tgcttcttta
     9601 ttggcaaaca atacatcaaa aagcgtatca tcttcgctat aacccatagc ttttgcctct
     9661 tctaaaacac ttggcagggt aagtttattg tctacctttt gttctttcca aacttcttta
     9721 agcttaaagc gttttgcaaa ttctaaaatt tgccaagtat cgctcattgc agcaccaaca
     9781 ggtaaaactt gttgtttcca atgttgtgtt cttctttcag cattgccata agcaccccat
     9841 ttttcataaa tcatggcgct tggcaaaata agatcggcta cttttgctga aattccagga
     9901 taacaatcac tcacaacgat aaaattatcc atatctctag ctgctgcgat ccagtgattt
     9961 gcatttgcag tgttttgcca tggattattt acttgcaccc atgcaaattt aatttttcca
    10021 tcttctaaat ctctcataat actaagataa ggagagcctg gttttggatt gatggttttt
    10081 gcaggaactt tccaaatttt ttctgaaatt tccctgtgtt ttggatttgc cacaaccata
    10141 tccgcaggca aacgatgcga aaaagttcct acttctctag ctgttccaca agcacttggc
    10201 tgtcctgtta gagaaaaagc tccgctacct ggtttagctt gttttcctaa taaaaaatgc
    10261 accatatagg cctgttcatt tatccaagaa cctcttgtgt gttgattaaa gcccatagtc
    10321 caaaaactta ccactttacg atttttctct atgtaaagat tagctaattc ttgaagtttt
    10381 ttcttaaaat cttctaaaga ttcatcatca tcgcctttgg ctacttttgc agtgtattct
    10441 aaagtataag gcgctaaacc ctttttaaat tcttcaaaag aaatttccca gtttttatca
    10501 gccacacctt gatgtttcat ttcaaattta tcgccggctt taacaccaag ataagaaaga
    10561 gaagtagctt cctcatcatc taaagtgatc acattttctt tttcaactgt atctttttca
    10621 ctctctttaa atttaggatg atttggatta tttctcatac cataaccaat atcagcataa
    10681 cctgttgcaa atacacagtg atcttttata aatttcatat ccatagcttc tggatgatta
    10741 taaacaatct ctcttgctat ataattccaa atagccaaat ctgtatttgg tttaaaaata
    10801 atttcaatat cagcaatatt agaagtacgg ttagaaaagg tgcttaaatt aacaacttta
    10861 actttgtcaa gattgcttaa ttttctatca cttactcttg accaaaggat tgggtgcatt
    10921 tcggccatat tagcccccca agtaatgata gtgtctgtaa gttctatatc atcataacaa
    10981 cctgagggtt catctacgcc aaaggtttgc ataaaaccaa ccactgcaga tgccatgcaa
    11041 tgtcttgcat ttggatcgat attatttgtt ctaaaacctg cttttgcaag ttttaaagca
    11101 gcatagcctt cttggacagt atattgtccg ctaccaaaaa ttcctatacc cgtaacacca
    11161 agttcattgt aagctttttt aaattgcttt tccatttcat caaaagctct ttgccaagag
    11221 acttgttgaa atttaccttt tttatcgaat tcaccttttt cattcatacg aagtaaaggc
    11281 ataaccaaac gatcttcgcc atacattatt ttagcattaa aataaccctt gatacaatta
    11341 agcccgcgat ttacaggtgc tgcaggatcg ccttttgtag ctacgatttt gccatctttt
    11401 ctagctatca taattccaca gccagttcca caaaatctac aaacagcttt atcccatttc
    11461 caatcttctt cttgtgcacc aagcatagaa cttggaacac taatccctgc aacactagca
    11521 gcacttgcaa tagcggtatt tttaataaaa tcccttctat tcattcttat tcctccaaga
    11581 taaaaaaatc atcttaaatt ataaaaaata aaatataaaa ttatcttgaa attttaataa
    11641 aaataataat tttaaagatc tattttataa gagttttatt gtccttttta tattattttt
    11701 acataaaata aatactgaaa ataattaact taataattac atgcaataaa ttaagattaa
    11761 gtatgaaaaa attttgaaga tataaaaatt aagccctaag aatgggctta atcaaattag
    11821 tgacaaccac atccgccaca gcagctagaa ccactaaaaa atgcatcaag ttttgcaata
    11881 tctggcattt ctgtgatttc atttacaagt tctttatagg ctattttgcc atctttaatc
    11941 acaaacacgg cacgagctaa aagtccttct aaagcacctt cacttatcaa aacaccatat
    12001 ttttcaccaa actcttttgc tacaaaatca cttgcaacgc ttaaattttc aataccttct
    12061 gtgctgcaaa atcttcccat agcaaaaggc aaatccatgc ttactatgat aacttcagcg
    12121 ccattgtagc ttgctacttt tttattaaac tctctagctt ccgtagcaca aactggggta
    12181 tctaaacttg gaacacttaa aacaatttga gttttacccc ctgtaccaat ttcaatcaca
    12241 cttaaatctt tagctttgat atttacttta ggagcatcta ctccaacttc tactgaattt
    12301 cctttaagtt ttacaggact tcctttaaaa ttcactgtac tcatttgatt tccttatttt
    12361 gatattttaa acattataat taatgtttta agaatgatta tatcctaata aacattaatt
    12421 atttttaatt ttactagaaa attattttac ttctttccaa gtatattttt tccatacttt
    12481 ttgagcttcc ttgctcttaa taaaattcac aaattctaaa gcctttttat tttccaaacc
    12541 ttttttcgta ggagctattt cagccgcacg ataaatcact gcttttttat ctttgataaa
    12601 taaagcctta tcatcgccta aagcctttgc ccaatgcgac caaataatta aagcatcgat
    12661 atttggatta ttattccact catctacagc agctttagaa tttttagcat aaattttgat
    12721 gtttttgcgt aattttacta aattttctct ttttgcactt tttaaagcca tatcttcata
    12781 aagcccaact tgtcctgcac catcaactac cataacattc acaccatctt ttaagatatc
    12841 ttcaaaattt ttgatatttt ttggattatt tggacgcacg ataatacccg atggacgcac
    12901 atttaaaaca cttaaatttt ccaaacttaa acttggaatt tttttagcaa aatcatccat
    12961 cattgaagta ttgcctgaaa aaatcaaatc cgcattttct tttgctttat ctatccaagc
    13021 tggagctgga cctgcggtta tgattacttt ttcttttgtt ttttcttcaa attttaaagc
    13081 aagctctttt aacacagggg caggaccccc tggaccataa accaaaattt cagcatttaa
    13141 aaagcttgct gctgctaagc ttaaaattaa tatttttttc ataaaataaa cctttctttc
    13201 attatttatg aaaggaaatt ttatcaatct atagttaact ctcccttgca caaccctgct
    13261 tctataagaa aacgtgaagg cgcaaaagaa gtctttttgt ttttatcata tttagcataa
    13321 cttaaataaa gtatattttt tgctctagtt accgcaacat aaaaaagtct tctctcctcc
    13381 tctaaacttc cacccattcc tataagcttt tgattaggaa agcgtccttg tgcaagatca
    13441 atcacaaaaa caagatcaaa ttccaaaccc ttgctcgcat gtacactgag caagttaact
    13501 cctttaccac tactcatttc acttgcacct aaggtgagaa aattataata cttataaata
    13561 tcactataat tttttgtaag ctcttttaag acattaaatt ttgtttctat tttttctaaa
    13621 ttttcgcttt ttcttaataa atctatctgc cctgctttat tggtcgctct tttggtcgca
    13681 agttcctcac aaatttctct ataaaaagaa ttttcacaaa ttaaatttac caaagccaaa
    13741 gaatgtttta attccatagc tttttttaaa aaaaggtaga ttttttctaa atttttagca
    13801 cataaatcac tgatttttga aagtcttaag ataggatgtg catcaaactc gctatcaaat
    13861 ttaaaacgag tttcactggc taattcttcc aaatcttcaa aaagtccaag ttgataattt
    13921 cttttttgat gattttgtaa attcacacct ctatcaggcc ctagaaaacc ttttatcaag
    13981 tttccatgtc ctagttttaa aagtgcatca aaaatttctt ttgctaaaac tccacctacg
    14041 cctttggtgt attggactaa atggataaaa gccatgatat ctttagggtt tactacaagt
    14101 gcaagcatag cactgaaagc tttaacttcc aaactttcaa aaaaacttcc acttcctttt
    14161 ctcacgcttg caataccctg ctcccttaaa gccacttcaa ttccatcagc acttgagtta
    14221 ttgcgaaaaa ttacagcaat ttcttctaaa ttcactccgc ttgtaagtat tattttggct
    14281 atattttgat actgatcaaa taattcttca aaagtaagca aagacggggc tttaaactca
    14341 tcatttcttg taacaataag ttcttttgga tataatcttt cgttatttaa aatcacttta
    14401 ttagccaaag ctaaaatact tcttgacgaa cgatagtttt tatttaaaga aaaaatttga
    14461 gcatctttaa aacgatcttt aaatccccct atgatattaa tatccgctcc attaaaagca
    14521 taaatacttt gatcataatc gcccacgcaa aacaaacttt tactatgaaa agcctcgatt
    14581 aaagaacttt gtaaagtatt tgtatcctga tattcatcaa ctaaaatttc atcaaattcg
    14641 tatttttctt cttttaaaag ctcttttaaa ttgataagca aatcattaaa atccacataa
    14701 ttaaaacgct ttttttcgtt atcatattct tttaaaacat cttcataaat ttcagcataa
    14761 atgctttgat cttcataatt ttgacaaaac caagtataaa aatcttgatt gtgtgcttta
    14821 ttttgaaaca aagaataaag atcatacaaa taacttggtt gataaggctt tatatcactt
    14881 aaatgtctaa aagttctttt ttcataaaca cttctaagta gggtttttag ctcgcttgct
    14941 tgttttaagg ctatattttt atctgcattt ctaagtaaag tataagccat gctatgaaaa
    15001 gttcctgcaa atattttgct tgtaatattt ttgtcaaaaa atttccccaa acgccctatc
    15061 atttccttgc tagctttgtt tgtgaaagtt aaaagcatga ttttttgcgg tgcaatgcct
    15121 ttacttaaaa gataagaaat tcttgcaaca atagtagaag tttttcccgt tcctgcgctt
    15181 gcgataacaa gattatgtcc gaaatcagca gtagcggcaa gatattgttc attatttaac
    15241 tttgaaagtg gcattgtttt ccttgtataa agtcaaaatt ataaaaaaaa attacttaaa
    15301 aatataaaaa tttaaaatta ctttatatta gattatagta caataccaaa attatttaac
    15361 tttctgtttt aagggataac aaatgaattt gaaaattttt tctattattg ttggcatatt
    15421 aattgctatt gctgcaatat taggtggaac ttattattat ctttttgaat attcaaaacc
    15481 aaaaaattac accttgaata ctagcactta taccgaacaa aaatcatatg ctaataatta
    15541 tgataattct tattcatcct caaatcaaac caacaataat tcatctgatg caaatatcaa
    15601 taacaacatt attcaaaagc aagagataaa cctatcaaat gagaatcgaa gcttaagcaa
    15661 caatacattt aacacaacaa taaatgaaaa caatcaaagc ttaaatgata ataatataac
    15721 caataatgtc aacacaaatg aaaataagca aaatttaagc acagataaag aaaaattaaa
    15781 acgagaaaac aaacaggcta aaatagaatc tcttaaaaaa gaaatcaaca aacatcaaaa
    15841 gattctagaa agagaaaagg ctgtaaaaaa agaacttcaa tcagataaat caaataaaaa
    15901 caaatatcta aacaccgcta gagagtatct aagcatagga aaaaatagtc gtttagaacc
    15961 tgagcttagc acagaaaata tgaaagttta tgttttagat ggaaaatttt taagccaata
    16021 cagaatcgac ttattaaaag atatgctaag tgttatacaa gataatgcta aagattatta
    16081 tttaagtatt tttgtaaaaa tgttaccaaa aggagaaatg aagttaacta tctataataa
    16141 agaaattatt ttttcagata tgaaaaaagc ttataaatat ataagcttag atagactaag
    16201 cccatactta aacaatccaa aagaactaaa tgaacatgta gcgcgcgaag aaattttaga
    16261 aagacttaaa tttcaaatta aaaaagatgg caaaggaagt gatttttcca aacatatcaa
    16321 aagtttaaaa actgggctta acgcggcaca atatttcttt ccattttgtg aaattataga
    16381 aattagctct atttaataag ctaaaacaat aaaggcaaat aatgtatgat aaaaatttag
    16441 aaaaagaata ttatcaaatt tgcgaaaaac gcggatattt tgaaatcgat ggcaataaag
    16501 ccatacaaga agaaaataaa aatttctgca ttatgatgcc tcctcctaat gttacaggag
    16561 ttttacacat aggacacgct ttaaccttta ccctacaaga cattatgaca cgttataaaa
    16621 gaatggatgg ttataaagtt ctttatcaac caggacttga tcacgcaggt attgccaccc
    16681 aaaatgttgt agaaaaacaa cttctttccc aaggtatcaa aaaagaagaa ttaggtagaa
    16741 aaaaatttat agaaaaagtt tgggaatgga aagagcaaag cagtggaaaa atcttggatc
    16801 aaatgagaac actaggcatc actcctgcat ggagtcgttt gcgttttagc atggatgaag
    16861 gtttagttaa tgctgtaaaa aaagccttta tagaacttta tgataaaggg cttattgtgc
    16921 gtggaaacta tatgataaac tggtgtaccc acgatggtgc tttaagcgat atagaagttg
    16981 aatataaaga aaataaagga aagctttatt atattaaata ttttttaaaa gacagtgatg
    17041 aatttttaat agtagctaca acacgccctg aaactttttt tggcgacact gcagttatgg
    17101 tacaccctga tgatgaacgc tatgctaaat ttgtaggcaa gcaagtaatt ttacctataa
    17161 gtaaaaaagc cattaaaatc ataaccgatg agcatgtaga aaaagaattt ggaacaggag
    17221 ttgtaaaagt tactccagcg catgatatga atgactatga agtaggactt agacataatt
    17281 tagaatttat aagtgttttt aacgaaaaag gaattttaaa tgaacattgt ttagaatttc
    17341 aaggtttaga acgcttagaa gcaagggaaa aaatcgtagc taaacttaaa aatcttggtt
    17401 ttatagaaaa gatagaagaa cataataatc aagtaggata ctgctatcgc tgtaacaata
    17461 tagtcgaacc ttatatctct aaacaatggt ttgtaaaaaa agaaatcgct caagaaagta
    17521 tagaaaaagt agcacttggt gaaagtaaat tttatccaaa tcactggata aatagcttta
    17581 atgcttggat gaaagattta aaagattggt gtatttcaag acagctttgg tggggacatc
    17641 aaattcctgt gtattattgt gaatgtttgc atgaatgggc aagtcaaaat acgcctaaat
    17701 cttgtccaaa atgtcaaagt cagaatttca aacaagatga agatgtactt gatacttggt
    17761 tttcttcagg gctttgggcc atgagtactt taggctgggg aaatgaaaat tggggcaagg
    17821 ataaaatttg gtctaaaaat gacttaaaag atttttatcc aaattcttta ctcattacag
    17881 gttttgatat tttatttttc tgggttgcta gaatgatgtt tcaaagcact aatgccttac
    17941 atcaactccc ttttaaagac atttatctac acgctcttgt gaaagatgaa caaggcagaa
    18001 aaatgagtaa aagccttgga aatgttatcg atccaaatga aagtattaaa gaatatagca
    18061 ctgatatttt acgctttact ctagcattac ttgctataca aggacgtgat atcaaactta
    18121 gcaacgataa gcttttacaa gttagaaatt ttacaaataa aatttataat gccgcaaatt
    18181 acctactttt aaatgaaagt aaatttgaag atttggaaaa tatcgtactt caatcagaac
    18241 tcgcaaaata tatctatgtc aaatttcaaa cttgcgttaa agatgtaaga gaaaatttag
    18301 acaattaccg ctttaatgat gcagctaaca cactatataa attcttttgg gatgattttt
    18361 gtgattgggg tatagagctt agcaaagctg aaaaatcaag tgttaaagaa cttggtagta
    18421 tttttaaaga agctttaaaa ctcttaaatc cttttatgcc ttttattagc gagtatttgt
    18481 atcacaaact aagcaataca gatcttaaga caagtccttc tattatgata agtaaatatc
    18541 caaaatttaa agaacaagat aaaaatatag aaaaaatttt ttctttactc atagaaagta
    18601 tagttggcat ccgtcgtgct aaaagcttaa ttgatcttgg aaattctaaa atagaaaaag
    18661 cttatattaa atttaatgat aaaaaagtta aagatgaaat caaagcttat atgaatttta
    18721 tcatgatgct cgcaaaatgc gagcaaatag aatttagtga agaaaaatta ccaaaagcga
    18781 tatgtgatgt tagcgagaat ttagaaattt tcattacgct taaaaatgtt gatttaagcg
    18841 gtattttaac aagacttgaa aatcaaaaaa ataaacttga aaaagaaagt ttcaagctta
    18901 gctccatgct ttcaaatgaa aaattcattg ctaatgcacc taaagaggta gttgagcaaa
    18961 acaaagaagc tctagaaaat ttaaaaattc aacttgaaaa aatatcggtt gaacttcaaa
    19021 atctaagagg ttagaaattt gataaaaata aaaaatttaa aaaaatatta tagtaaagaa
    19081 ctcgttatta acgatgtatc tttagaaatc aaaaaaggtg aaatttacgc catagtaggt
    19141 catagtggag ctggaaaatc cactctttta agatgtatta atgggcttga aaattatcaa
    19201 gaaggtagct taaaggtatt tgatcaagaa attaaagatt taagtcaaaa aaaaacaaaa
    19261 gaactaagag tgcttagaaa agatataggt atgatttttc aaaattttgc tctaatggaa
    19321 cgcaaaaatg tatttgaaaa tgttgccatg cctttaaaaa cacactatac tcagtgtaaa
    19381 tttcatgcca agctttttgg caaagaatat atgagcgaaa aagaaattgc tcaaaaagtt
    19441 aattctttgc ttgaaatcgt agggcttgac cataaaaata aagcctatcc aagagaactt
    19501 agtggaggtc aaaaacaacg cgttgctatt gctagagcct tggctttaaa tccaaaaatt
    19561 ttactcagtg atgaagccac ttcagctctt gatccaaata caacaaaaaa tattttagaa
    19621 cttatatcta aaatcaatgc cgagtttgga attactgttg ttttggtaac tcacgaaatg
    19681 gatgtagtaa aagacatagc tcaaaaagct ttattacttg aacatggaca aatcatagga
    19741 agtggagcaa ttgatgagct ttttttaaga cccaatgcta aaatgaaaga atttttagga
    19801 gagagcgatt tcctacccga acacggactt aatattaaac tttactttcc aaaagaagtt
    19861 gcacaaaata gcgtgattac acatatggca agaactctaa atatagactt taatatagtt
    19921 tggggtaaaa tagaaaaact taatgggaaa gctttaggga atttagttat aaatataaac
    19981 gagaaagata aaggcaaagt tcttgattat atagaaaaaa gcggagtgtt atgggaggtg
    20041 gcatcatgaa tgaagaaaat acctctatta taagcgcctt ttttggtaga atttctcaat
    20101 tttttaatga attttcttgg caggatatca aagaggtaag tttaaattct atcacaagct
    20161 tcagtgaaaa ttatgaaaac attttaaaac ctgcgtttaa tgaaacaatt tatatgagct
    20221 taatggctgt attatttgga tttttattat ctatcattcc tggaatttta cttgctattt
    20281 ggggtaaaaa tgggattaaa gaaaataaaa ttgcttatag tattttagac tttataacaa
    20341 atatattgcg tgcctttcca tttttaattc ttattgttgt tcttttacca ctttctaaaa
    20401 tcatagtagg cacaagcata ggcacaaatg ctgctatagt tcctttagct attggaatag
    20461 ctccttattt agcaaaaatg cttgaaagtg cctttaaaga aatagataaa ggcattatag
    20521 aagcagcaaa gagttatggc gctagtaata ttcaaattat tttcaaggtt atctttagcg
    20581 aagctcttcc tgctataatt agcggaatta ctctaacttt aatttttact atcggttttt
    20641 cagctcttgc aggaactgtc ggtggaggtg gcttagggga tgttgctatt cgctatggtt
    20701 atgaaagatt taataaagaa gttatgattc aaactgtaat cattttgctt atattagttc
    20761 agttagttca aattttaggt aatttatttt atacttgggc taaaaatagt aaaactacct
    20821 atatcattgt tactctattg attttgcttg cagttagcat aattatcaat ataaacaatg
    20881 atgaaaattt cttttggcaa gcaattgttt ttatcttact tttggtaagt ttgctttata
    20941 aaagttttaa gaaataagga gattacatct ccttttaaga taaatataag tttttttaag
    21001 taaaatttaa actaaaaaat taaaggaact aaaatgatgc atcagatgcg ctaatctgac
    21061 tatcaacaag ttttcataat acttcttcct gatagtcaga gtgattttac taagattaaa
    21121 gcaagcacaa aatgactaaa aaggaaaaaa atgaaaatca aatctttatt tatagcaagt
    21181 attttaacat taagtcttaa tgcgaatgca ttagaaacca tcacagttgc agcaactcct
    21241 gtccctcatg ctgaaatcct agagcaaata aaacctgatt tagaaaaaca aggctataag
    21301 cttgaaataa aagaatttac agattatgtt ttacccaatc tagctgttga caatggagaa
    21361 gctgatgcaa attttttcca gcatactcct tatttggaag aatttaacaa aaacaaaggt
    21421 accaaactta caaaagtagc tgctatacac atagaaccta tggctgttta ttctaagaaa
    21481 tataaaaatc tagatgatat taaagaagga gttaaaattg ctattccaaa tgatccaact
    21541 aatgaaagta gagctttaga tatcattgca aaaaaaggtt tggtaaagtt taaagacaaa
    21601 gctttaaaaa cacctcttga tattgtagat aatcctaaaa aaattcaatt tgtagaatta
    21661 aaacctgcac aacttccaag agctttagat gatgttgatt ttgctgtaat taattctaat
    21721 tatgcactct ctgcaaatct aaatcccgca aaagatggtg tatttattga agacaaagaa
    21781 agtccgtatg ctaatattct tgttgtaaga gtaggacatg aaaatgatcc aaaaatcaaa
    21841 gccttaatcc aaactctaca aagtgataaa attaaacaat ttatcataga aaaatacaac
    21901 ggatccgttt tacccgcttt ttaatcttgt cccttatcta gggacttttc tttcttcaat
    21961 acaaaggaat tttcatgaaa ttatttaaga ttattacact tgcttgcatt ctaaatttat
    22021 ctagtacatt tgcacaaagt attactatag gagccactcc aaatcctttt ggtagcttac
    22081 tagaattaat gaaagatgat tttaaaaaca aaggatatga acttaaaata gtagaatttt
    22141 cagattatat tttacctaat cgtgcattag aagaaaaaga acttgatgcg aatttatatc
    22201 aacacaaact ttttttagaa gaatacaatc taaaaaaagg ttcaaaccta atcgcaacaa
    22261 cgcctgtgct tatagcccct gtaggaattt atagtaaaaa aatcaaaaat ttagaaaacc
    22321 ttaaagaagg agctagggtt gctataccca atgatccaac taacgaaagt agagctttag
    22381 aacttttaga aaaggcaaaa ttaatagaac ttaataaaaa tactctaaaa actccactgg
    22441 atataagcaa aaatccaaaa aaacttaaat ttatagagct taaagccgct caacttccaa
    22501 gggctttaga tgatgttgat atcgctataa ttaattctaa cttcgcactt ggagctggac
    22561 ttaatccaag caaagacact gtttttagag aagataaaaa tagtccttat gtaaattatg
    22621 ttgtagtacg cttagaagat aaaaatagcg aaaaaaccaa agtaattgat gaaattttaa
    22681 gaagtgataa atttaaaacc atcatcaatg aacattataa agatatatta atcccagctt
    22741 tttaggagta caaatgaata ttaaaaaaat atttttaagc gttttatttg caattagtct
    22801 tagctttgga gcggataaaa ccataactat aggtgcaaca cctacacctt atgctgaaat
    22861 tttaaatttc tctaaacctt tatttcaaga aaaaggttgg aaattagtag ttaaagaatt
    22921 taatgactat aatataccta acattgcttt aaatgaaaaa gatttggatg caaatttata
    22981 tcaacataaa ccttttttag atgattttaa tacccacaaa ggaacaaaaa tagcttcttt
    23041 aggtgctatt gttttagttc ctatggctat atattctaat tctataaaag atatcaaaga
    23101 tattcctaat ggggccaaaa tcgctatacc taatgatgct actaacgaaa gtagagccct
    23161 tgatttgtta gctaaagcag acttaatagc gtttaaaacc caaaatactc taaaaactcc
    23221 actggatata agcaaaaatc caaaaaaact taaatttata gagcttaaag ccgctcaact
    23281 tccaagggct ttagatgatg ttaacttggc tgttattact acaaattatg cccttggagc
    23341 gggcttaaac cctttaaaag atggtatttt tatagaagat aaggatagct tatatgctat
    23401 tgttttggct acaagaaaag gtgaagaaac aagccaaaaa agtcttgtta ttaaagaaat
    23461 tttaacaagc gataaaatca aaaattttat catagaaaaa tacgaaggct ctgttattcc
    23521 tactttttaa ctctacacaa agccttctaa aggctttgtt aaacttataa aagctaaaat
    23581 actcttacta taaataattt ttaggataaa aatgaaaatt attcttttaa gttttttcat
    23641 tatgataaat tgcattcaag gagctacttt agaagaaatc aaaactgcac taggtaaaga
    23701 atttgcaaac aattttccta aaattataat ttctcaaatt gatttaaaaa taacatcatt
    23761 gcctaaagat tttgatcaat acgaattttt aagaattgcc aatggacgct ttaatcaagc
    23821 acaaggtttt ttaagagccg aatttaaaac tccacaaaat atacaaaaaa atgtattttt
    23881 tagatatttt atccaagcaa atttagaagt tttaaaaagc gagcgtgcta ttaaaagagg
    23941 agataaactt gggacttttg attataaaag tgtattgatt gattttgata aagttccttc
    24001 aaatgcccta actttggatg atgtaaataa tcttatagct aaaagcaata ttaacaaaaa
    24061 cactatttta agagcaaata tgtttaaaac cacagcctta atacgccgaa atgatcctat
    24121 aattggggtt ttaagcgaag caaatgttga tgttttaatt gaacttgtag ccttgcaaag
    24181 tgcaaatatg ggtgaaagaa ttcgtgcaaa aaacaaagaa gggagagtta tgcaaggtat
    24241 tgtagtagga aaaaatagga tgattataca atgaaaattt tattaggaat ttctggctca
    24301 agcagtgtaa atttaggctt aaaattatta aaaaatttag aaaatcaatg cgagctttat
    24361 tgtattttaa cccaaggtgc aaaacttagc tttaaagctg aaaatcaagc aactttggaa
    24421 caaatttgtc aagagaattt taaaaatact cattttttag atgataaaaa tttaagccta
    24481 aacgtagcaa gtggatcttt tggaatagaa aaaaccatta ttgctccttg ctctatctca
    24541 agtttggcaa aaattcacgc cggttttgca gacactcttt taatgcgtgc tgcagcagtt
    24601 gctttaaaag aaagaaaaaa acttatcttg ggtgtacgtg aaatgccttt ttctatttta
    24661 aatttagaac atatgctaaa acttagtcaa atgggagcta ttattgcacc tcctattatc
    24721 gcgagttatt ctcaagcaaa taatctagag caaatggaaa gttttatcat aggtaaatgg
    24781 ctggatcttt tagaaataaa acacgattta tataaaaaat ggcaaaattt ttagtttaaa
    24841 tttgttatat ttttaaaaaa aattggagca aaaatgactt gtttatatcc tgggactttt
    24901 gatcctatta caaatggaca tttagatgtt ataaagcgag ctttaaaaat ttttgatgaa
    24961 gtcatcattg ccatagcaaa aagcgaacat aaaaaacctt tttatgattt agaaaagcgc
    25021 aaagagcttg ctttgcttgc tacacaaaat ttaaataata ttaaaatcat tgcttttgat
    25081 aatttgcttg tggatttagc caaagaatta aaagttaaca ctataatccg tggacttaga
    25141 gcggtgagtg attttgaata cgagctacaa attggttatg caaatcacgc actttgggaa
    25201 gatatcgaaa ccatttatct tatgccaagc ttaaaacatg cctttatttc aagctctatt
    25261 gtacgttcta tcgtagcaca cggcggagat gtaagttctc ttgtttcaaa agaaatttta
    25321 ccctttttga aggattaatc ttgtatatag tttttgaagg catagattgt gtgggaaaaa
    25381 gcacgcaaat ttcactttta aaaaaaattt acaaagatgc tgtttttaca cttgaacctg
    25441 gtggaacaga acttggaaaa catttaagag aaattttact taataaaact taccctatta
    25501 acaaaagaac tgaacttttg ctttttttag ctgaccgtgc ccagcatttt gaagaagtct
    25561 taaaagacaa tcaaaacaaa ctgattatca gcgatagaag ttttatctca ggtatggctt
    25621 atgcaaaaga ttttgaaaat gatttgcttt ttactttaaa tagctttgct ttagataatt
    25681 tttttccaca aaaagtcatc tttttaaaag gtgatgaaaa acttatcaaa gaacgcctta
    25741 atcaaaaaga actcgataat atagaaaaac gcggtattga gtatttttta agtgtacaag
    25801 ataaacttga aaagattctt aagtttttaa aagaaaaaat ttctatagaa attttaacgc
    25861 ttgatgcaaa agaaagcaaa gaaaatttac accaacaaat aaaggaattc ttataatgat
    25921 taacgcttta aaaggaatga aagatttatt agataaagat gcatattatt atgaaaaagt
    25981 agttaaaacc tgtgaagaaa tagctaaaaa ttatggtttt acttttatca atacaccaca
    26041 tttagaactt tgcagccttt ttaaaagaag cgtaggagaa agttctgata tagtgggtaa
    26101 agaaatgtat gaatttattg acaaaggcga aaatcatgtt tgcatgcgcc ctgaaggaac
    26161 cgctggagtc gtgcgtgctt atatagaaaa aaagatggat aaaagtaata cagtaaaaag
    26221 atggttttat catggctcta tgtttcgtta tgaaagacct caaaaaggac gcttaagaga
    26281 atttcatcaa tttggtgttg aaagttttgg aaatgcaagc atttatgaag atgcaagcat
    26341 tattttaatg ttagtagaaa ttttttcacg cttaaatatt aagtttaagc tacttattaa
    26401 ttctctaggg tgtttagaat gtatgccaaa ataccgtgaa aatttaatac attttttaga
    26461 taccaaagaa ggtttttgcg aggattgttt gcgtagaaaa agcttaaacc ctattcgtgt
    26521 tttagactgc aaaaaggaac attgtcaaag cttacttcaa gatgttccac ttttaaatca
    26581 aaatttatgt tcatcttgta aaaaagactt tgaaattttg caaagcgttt taaaagaaaa
    26641 tggggtgaat tttgaaattg attctaagct ggttagagga cttgattact actctaaaac
    26701 agcttttgaa tttatcagcg atgaaattgg tgcaaaggct gctattgcag gtggtggaag
    26761 atatgataga ttgattgaat atcttgatgg aaaaaatggc tttggcgtag gttttgctat
    26821 gggtatagaa aggattatag ctattttaga gcaaaaagaa gaaaagcttg aaagagaagg
    26881 aatatacctt tgtgctatgg atgaaattta tatccataag cttttaaata tagctacaaa
    26941 tttaagaaaa aaatacaaag tacttttaag ctatgaagca agaaaactag ccaaacacct
    27001 tgaaaatgca gataaaaata atgctgaaat ttttctttgc atgggagaaa atgaagcaca
    27061 aaatgaaagt ttattttata aaaacttagc aaaaaaagaa gaaaaaatga ttaaaatttc
    27121 agacttggag aaggttttat gatggattat ggtattgata tttggggaaa tgaaaatttt
    27181 attatcaaaa atggcaaagt ttgcatcaat cacgaaaaaa aacctgccat tattgatata
    27241 gtcaaagaat taagagatga tggatataaa ggccctttac ttttaagatt tccccatttt
    27301 atccaaaaac aaattgaaaa tatttatgga aatttcaata aagcaagaaa agaatttggc
    27361 tataaaggag gatttaacgc cgtttatcct ttaaaagtca atcaatatcc tggctttgta
    27421 aaaaaccttg taaaacttgg aaaagactat aactatggac ttgaagcagg ttctaaagca
    27481 gaacttttac ttgccatggc ctataacaac gaaggtgccc ctattaccgt aaatggtttt
    27541 aaagatagag aacttatcaa tataggtttt atagctgctg aaatggggca taatatcact
    27601 ttaaccatag aaggacttaa tgagcttgaa gccatcatag atatagccaa agaacgcttt
    27661 aaaccaaaac caaacatagg actgcgtgtg cgtttacact ccgcaggagt tggaatttgg
    27721 gcaaaaagtg gtggaattta ttctaaattt ggacttacct ctactgagct tatagaagca
    27781 gtaaatttac ttaaagaaaa taagctttta gaacaattta ccatgataca ttttcaccta
    27841 ggctcgcaaa ttactgaaat tcaccctttg aaaaaagcct taaacgaagc aggaaatatc
    27901 tatacagaac ttagaaaaat gggagctaaa aatttaaaag ctattaatct tggcggtggc
    27961 ttagctgtgg aatactcaca gtttaaaaac gaaaaaaata gaaactacac cttaagagaa
    28021 tacgctaatg atgtagtttt tattctaaaa aatatagccg aacaaaaaaa agatcttgaa
    28081 cctgatattt tcatagaaag cggccgtttt gtagcagcca atcatgcggt tttaatcgct
    28141 cctgtattgg agcttttttc acaagaatac gcagaaaata aactcatact taaaaaacaa
    28201 aatccaaaac tcattgacga gctttatgat ctttacaaaa gtataaaacc ttcaaatgct
    28261 ttagaatatt tacacgatag catagatcac ttagagagca ttttaaccct ttttgatttg
    28321 ggttatgtgg atttacaaga tcgttccaat gctgaaattt taacccattt aattacaaaa
    28381 aaagctatct tgctcttagg agataagcaa aatcctgcag atttgctcgc tatacaagat
    28441 gaagtgcaag aaagatattt agtaaatttt tcactttttc aaagcatacc tgatttttgg
    28501 ggtttagagc aaaattttcc tatcatgcca cttgatcatt tagatgaaga accaaccaga
    28561 agtgcaagca tttgggatat aacttgcgat agtgatggag aaatttcata ctctaaagat
    28621 aatcctttat ttttacacga tgtagatgtg gaaaaagaaa attatttttt aggttttttt
    28681 cttgtaggtg cttatcaaga agtacttgga atgaaacaca atctttttac tcatcctacc
    28741 gaagccatta taagcatcaa tgaaaaaggt tatgaaatcg aaggaattat agaagcacaa
    28801 tctatacttg atgccttaga agatttagac tatgatatac acgctattat gaatatactt
    28861 aatgaacgta taagcaattc taaacttgta aatgacaaac aaaaaaagca tattttaggt
    28921 gagctttatc ttttcttaaa cgacaatgga tatttaaaaa gtataggagt ttagatgaat
    28981 ttttggggta ttataaaaga agatttttct caaccaaagg tgcaagatcc ggcttttgga
    29041 tcttgcgtag aacttttttt taattaccct ggagtatggg ctgtagtaaa ctaccgtttt
    29101 gcacattttt tttacataag aaattttaaa cgcattgcta gaacgattag tggaatttct
    29161 caatttttaa ccggggtaga tttacatcct ggagcaaaac ttggaagacg agtttttata
    29221 gatcatgcca atggagtagt tataggccaa actgcagtca tagaagatga tgttttaatt
    29281 tatcaaggtg ttactttagg tggaacaagt cttgaaaaag gtatcaaacg ccatccaact
    29341 ataaaaaaag gagtaatcat aggctcaggt gcaaaaatac ttggtaatat cattatagga
    29401 gaaaacgcca aaataggttc aaatgctgtg gttgttaaag atgtaggtgc aaatttaacc
    29461 gctgtaggaa ttcctgctta tattatcgaa gaacgcaaga ataaaaatat tagagctata
    29521 gatgcaaact gcgaggataa attagaaaag ctagaaaaga aaattttaga acttgaaaat
    29581 cttgtattaa agcagtttaa atcataaaaa taataatttt ttataataca taaaatttta
    29641 catattaatt ttttaaaaa
//
LOCUS       DAPWAA010000016        28726 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.016, whole genome shotgun sequence.
ACCESSION   DAPWAA010000016 DAPWAA010000000
VERSION     DAPWAA010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 28726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28726
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.016"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..555
                     /locus_tag="RTF91_000640"
     CDS             <1..555
                     /locus_tag="RTF91_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDZ4943555.1"
                     /translation="DFSFGKNRAYNAKDIEPLSGIKTIIVDEFSIGGTGVHASLIKNF
                     LVKANLQKAKEFLGRNYSIKGKVVKGQGLGSKELFATINLDCEGYFLPQNGVYATLLK
                     SQRKICKSVSFLGIRSSDENFSIESHILEKLDENFMQEEFLELEFIAFLRENQKFQDL
                     KKLKSKIVKDIKQAQNLLRKSDER"
     gene            542..1252
                     /gene="cmoA"
                     /locus_tag="RTF91_000641"
     CDS             542..1252
                     /gene="cmoA"
                     /locus_tag="RTF91_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HDZ4943556.1"
                     /translation="MMKDELFKQSPKKQFEFDKSVASVFDDMINRSVPFYKENLELCG
                     NLLAKILPINASICDLGCSSANFLIFLANLRKDFKLFGVDNSACMLEVAKSKAKAYGL
                     GINFFEANLCEFDFFSCDVFVANYTMQFIRPPKRQELLNEIYKNLNSKGVLIMSEKIL
                     YEDAFLSKNIIELYADYKKKQGYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKK
                     IESIFKWANFETFIAFKD"
     gene            complement(1242..1463)
                     /locus_tag="RTF91_000642"
     CDS             complement(1242..1463)
                     /locus_tag="RTF91_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDZ4943557.1"
                     /translation="MAMKIILFLSLVGIFFTACEQTKSIEYYQNHPEEAKKRSLECRH
                     KAIISQDCVNAYKIGFPKDEWENENNSNP"
     gene            complement(1454..1869)
                     /locus_tag="RTF91_000643"
                     /pseudo
     CDS             complement(1454..1869)
                     /locus_tag="RTF91_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880307.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1928..2560)
                     /locus_tag="RTF91_000644"
     CDS             complement(1928..2560)
                     /locus_tag="RTF91_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HDZ4943558.1"
                     /translation="MEINALTITTLYIVGISAEGMTGALAAGRHKMDLFGVIFIALVT
                     AIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVATKIPRVVTKLESLFLTLDAIGL
                     VVFSILGAQIAIDQNLGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII
                     AGTIYYSLTIWLEFNTLVCTLLTLFIGVIARLLAIKYQWSLPIFSYNEEK"
     gene            complement(2572..3222)
                     /locus_tag="RTF91_000645"
     CDS             complement(2572..3222)
                     /locus_tag="RTF91_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HDZ4943559.1"
                     /translation="MKIFIFLLTISLHVFALEAYKPSADFSSYFNNINCSQVLDKFFY
                     LNCYDYKLKGTKAVAYKVEASNLKDKQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYTR
                     GHTAPNASFNFNKAAQNSVFLMSNITPQNAQINNKIWNEIEQKEKSLALKFQSIEVLN
                     LVLYDKELKYIKNHIAIPSFYIKIIKTPKFKECYQVPNHQVSDENIKQYQINCDKF"
     gene            complement(3219..3845)
                     /gene="nth"
                     /locus_tag="RTF91_000646"
     CDS             complement(3219..3845)
                     /gene="nth"
                     /locus_tag="RTF91_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDZ4943560.1"
                     /translation="MKRNLEIKELFLKHFNKPVTELKFSNLYELLVCVMLSAQCTDKR
                     VNLITPDLFKAYPDIKALANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFNGEI
                     PLDEQNLKSLAGVGQKTAHVVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPESTEED
                     LTRIFKDNLNYLHQAMVLFGRYTCKAKKPLCKECFLNHLCKSKDKELK"
     gene            3924..4745
                     /gene="peb4"
                     /locus_tag="RTF91_000647"
     CDS             3924..4745
                     /gene="peb4"
                     /locus_tag="RTF91_000647"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PEB4"
                     /protein_id="HDZ4943561.1"
                     /translation="MKKFSLVVAALIAGVALNVNAATVATVNGKSISDAEVSEFFAPM
                     LRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPLYTKELDRAKDAILVNVY
                     QEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGK
                     ELDAKFSELAKEKSIDPGSKNQGGELGWFDESTMVKPFTDAAFALKNGTITTTPVKTN
                     FGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK"
     gene            4745..5809
                     /gene="fbaA"
                     /locus_tag="RTF91_000648"
     CDS             4745..5809
                     /gene="fbaA"
                     /locus_tag="RTF91_000648"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HDZ4943562.1"
                     /translation="MGVLDIVKAGVISGDELNKVYDYAKAEGFAIPAVNVVGTDSINA
                     VLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYGVPVILH
                     TDHAARKLLPWIDGLIKANAEYKKNHGQALFSSHMLDLSEESLEENLSTCEVYLKKLD
                     ALGVALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFG
                     NVHGVYKPGNVSLQPEILKNSQKFVKDKFTLNNDKPINFVFHGGSGSELKDIKDALSY
                     GVIKMNIDTDTQWAFWDGVREYEFKNRAYLQGQIGNPEGDDKPNKKYYDPRIWLRSGE
                     ESMIKRLEIAFEDLNCINKN"
     gene            5900..7342
                     /locus_tag="RTF91_000649"
     CDS             5900..7342
                     /locus_tag="RTF91_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDZ4943563.1"
                     /translation="MDIKSDEISELVLPEGKDVRGSLVYLKIIFIPAFLYVLILLGYF
                     NVIDFKVELHTVVMTGVIFFTALIFARHSAEYAYSIFEQQKDEFKQALKRHIMRHFLA
                     IGKDTKSNANFDDFAYTYIKGARNENFASIGSAIFPMMGILGTFISIAFSMPNFSSSD
                     IAALEQEIADLLSGVGTAFYVSIYGIFLALWWMFFEKYGKSKIERLLNRQKNATSGFF
                     WTKEELDQRYLSESLQYFEKIGEIFKQVSNDDFFAELDHAIDRKFGIFQDMLNVEEKA
                     IRLSSEHIKQTMGELSKAQRDQRDLGKLYSEMLNGIGLLNQNLKEINTRMSEQYNRLL
                     DISSDKIHHLDKTLSAFDEKIERFGKNFELYEKAMLESQEKVFEGFKASLFEGMHKFK
                     EVYEEEKSIDDKIKMMDELKKEIKALDEETNQMMSKLSGDESQSKEDEAKQIEDFSES
                     KVEVNQDGVKTEIFKQESNDELKNEDKENK"
     gene            7339..8292
                     /locus_tag="RTF91_000650"
     CDS             7339..8292
                     /locus_tag="RTF91_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDZ4943564.1"
                     /translation="MKNESKEDSNFWIAYADLMAGLLFVFILLIGAIVVKYVLTQSDL
                     KEIKDNLNRQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITS
                     YKQLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLS
                     KELQSKLDNNITIDEKTGSISLPAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDP
                     KILSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS
                     FSDPVFLNGVEDKDKSRRIEIKFSVKNDNALKDVEKFFEFH"
     gene            8279..9154
                     /locus_tag="RTF91_000651"
     CDS             8279..9154
                     /locus_tag="RTF91_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-aminocyclopropane-1-carboxylate
                     deaminase/D-cysteine desulfhydrase"
                     /protein_id="HDZ4943565.1"
                     /translation="MNFIKTISPIQKINFNGFEFYVKRDDLLGEINGNKARKLAFYLY
                     QKYPKNQCFISYGGTQSNALAALSIFVKQRWCKLIFACEKISAFLKNNPRGNYALALQ
                     NGVEFVENTHSLSLKQFALSLCKKDDIFIEQGIANLEAEYGYIELAQEIQMQSERLKL
                     DFDIFLPSGTGTSAAFLAKHSKFKVFTCTCVGDIKYLKKQILTLVPNYDFSNLEILTS
                     DKKYHFAKPYKEFYELYMDLKLKCNIEFDLLYDILGLSMVLKQEWKKPLLYIHQGGIL
                     GNSTMLERYNFKKLV"
     gene            complement(9146..10489)
                     /locus_tag="RTF91_000652"
     CDS             complement(9146..10489)
                     /locus_tag="RTF91_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDZ4943566.1"
                     /translation="MRRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLV
                     FCIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQSIGYMGLLGSFGIMAYYMVLGG
                     WVLVYIWELTLGNFSLANVVSKEFTHRFFNDKIAFNPLGIGIFTTVFVIVNYIILKRG
                     IIDGIEKSVKFLMPLLFICLVIVVGRNLTLDGAMAGVKFYLEPDFSKILSSKLLIDVL
                     GQVFFALSLGFGVMITLSSHLNKNENMAKTAIYTGILNTIIAVLAGFMIFPALFSAGL
                     APDSGPSLVFETLPIAFSHIHFGTIICILFFILLLIAALTTSLPIYQVIINVLEEKFK
                     YSKNLSINLTLGFIFILGNLPCILTYGPWRDIIIIKGKNIFDSFDFISGNILFVLTAF
                     FCCIYVGWVLGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN"
     gene            complement(10540..11208)
                     /locus_tag="RTF91_000653"
     CDS             complement(10540..11208)
                     /locus_tag="RTF91_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDZ4943567.1"
                     /translation="MKIQSLQIGKIKNYKNFQSAFVKNIYLEETQIDFLGILDDQIAD
                     KIHHGGYHKAIFANSCQNYPVWERFLNKKLKFGMMGENLSINGLQEQNVCIGDIHQVS
                     NVILQVSEPRKPCVKISKIHNNPKFTHEIFKTGLSGWYYKVLQVGKIRKSENIKILEK
                     NSILLSVFELNQLFYSPYQILKQNPNLLDKLEKLNTFISQNWYETVHKRLKNTYNTSY
                     MDNL"
     gene            complement(11205..12908)
                     /locus_tag="RTF91_000654"
     CDS             complement(11205..12908)
                     /locus_tag="RTF91_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDZ4943568.1"
                     /translation="MRILGIILLSFCLCFASILSLNEAFNVKSNSYSNFISIDIELGK
                     DIYLYSNKLKLYINEKDISSLINLPQSSTRGNEHVYYQKLNLALPNLLLERFAKNDTN
                     LIKLEFQGCSEQGLCYNPQIWYFDLSSKKDAFEISKPYKAQTTNKKTDVKSEESSIAN
                     FLATDNFFWILLSFFGYGLLLSLTPCILPMIPILSSLIIAKSNAKFSKKHSFFLSFVY
                     VFFMSLTYAIAGVIASFLGASVQGILQKPVVLILFALIFIAFAFAMFGAFRFELPLKF
                     QTFIHKKSEKGKGLMGIAIMGFLSALIVGPCVAAPLAGALIYIANTGDALLGGSALFI
                     MSFGMGMPLLFIGLGLGFIKPGFWMEKVKIFFGFVMLAMAIWILSRIIENNYILIAYG
                     ILGVFFSVFMGIFEKSFTIISKIKKSILILVLTYSLSIFLGGLFGAKNFLNPLNFNSI
                     STTNSALSYDYINNLKQLKQEIQTSTKPLMLDFTASWCENCKLLDELTFKDERIVQKM
                     QNYKLIKVDVSENNSEQIKTMKEFNVFGPPVLIFFENGKEKLKITGFISADDLLNKLE
                     S"
     gene            13038..13838
                     /locus_tag="RTF91_000655"
                     /pseudo
     CDS             13038..13838
                     /locus_tag="RTF91_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002951386.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
     gene            13852..15042
                     /locus_tag="RTF91_000656"
     CDS             13852..15042
                     /locus_tag="RTF91_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDZ4943569.1"
                     /translation="MQKLVENLALKYYDKIVYLRHQIHMHPELEFEEENTANLVCEIL
                     DEFGIKYQRNIAKTGILAIIEGKKKSQKKSKCVLLRADMDALPIQEKTNLSYASKIDG
                     KMHACGHDGHTAGLLGAALILNELKDEFCGIVKFMFQPAEEGSGGAKLMIESDVLENP
                     YVDAVFGCHLWGALLENTVQIVSGEMMAGTDIFDLEFIGRGGHGAHPHTCIDPIVMAT
                     QFVNNIQSVVSRRLAPYEAGVITVGQICAGTTYNVIPANAYLKGTVRFLNDKTQDILK
                     NSLEQVAAATAKSNGGDYKLKYTKEFPPLINDEKAALIARKAFGKLLGEENIIISSKP
                     DMGAEDFAFLTRERMGAYVFVGISKDLNHPVLHHSSTFCWDDENLKVLMQGDVMMALE
                     FLNL"
     gene            15124..16290
                     /locus_tag="RTF91_000657"
     CDS             15124..16290
                     /locus_tag="RTF91_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDZ4943570.1"
                     /translation="MKKKIILIILIVILGSIGAYFIFFNNDEKISYLTQKIQKKDISQ
                     TIEAVGKVYAKDQVDVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDITKA
                     QLQSAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELN
                     AQVVQLEITLKNAQKDLDYTTISAPMDGVVINVAVDEGQTVNANQNTPTIVRIANLDE
                     MEVRMEIAEADVSKIKVGTELDFSLLNDPQKTYHAKIASIDPADTEVSNSTTSSSSSG
                     SSSSSSSNAIYYYAKFYVANKDDFLRIGMSIQNEIVVASAKAVLAVPTYAIKSNSKGY
                     YVEILENQKAVKKYVKLGIKDSINTQILEGVNENEELIVSSSADDLAPKIKLRF"
     gene            16290..18215
                     /locus_tag="RTF91_000658"
     CDS             16290..18215
                     /locus_tag="RTF91_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ4943571.1"
                     /translation="MIFLKNICKNIAENAILKNVSLSIEKGEFVAIIGQSGSGKTSLL
                     NIIGTLDTPSSGTYVFDQYEVTKLDNDEKARLRREKIGFIFQRYNLLTLLSAKENVSL
                     PAVYAGKNIQERNQNAKKLLNDLELAHKLESKPNELSGGQQQRVSIARALMNGGELIL
                     ADEPTGALDSKSGIMVLEILQKLNAQGHTIVLVTHDPKIAAQAKRIIEIKDGEILSDT
                     KKEKIQEKHTLKTMPKEKKTLTLLKNQAFECFKIAYSSILAHKLRSVLTMLGIIIGIA
                     SVVCVVALGLGSQAKVLESIARLGTNTIEIRPGKGFGDLRSGKTRLNFSDLETLRSLE
                     YLEAVDAYSNTSGVATYTNISLSARAEGVGANNFAIEGLRIDAGRILNNDDVKNSTNV
                     AVLDFNAKKNLFPAEKSENILGRVVLFNSQPFKIIGVLQKNTDKPIEDNVVRLYIPYT
                     TLMNKLTGDRNLREIIVKVKDEVSSTLAENAIIRILEIKRGQKDFFTFNSDTFKQAIT
                     ANKRTTTILTACVAVIALIVGGIGVMNIMLVSVSERTREIGIRMAIGARREDIMMQFL
                     IEAVMICTIGAILGVILSIFIIFAFNTLSTDFPMILNAYSVLLGLLSSMFIGVIFGFF
                     PARNAANLNPISALSKE"
     gene            18217..19587
                     /locus_tag="RTF91_000659"
     CDS             18217..19587
                     /locus_tag="RTF91_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDZ4943572.1"
                     /translation="MKIILSIFFSIFLSACGAKLSLPKEISLTQEQMKDLNLTYDWYK
                     SYDNVKLNEFLNFVLLNNSDINIARKTLLSALARADLINYDLYLTLSGNLGFGGDKDL
                     NSGKQSKNFNNSLNLSYELDIYGKLRDSASASEFNAKASAYDLENLKISMINTALNDV
                     FELAYFNDVDKLLQTYFANLEQMKELYSYKYELGKIEELDLLNIEQSLLRAKQNLLNN
                     DQNRNLLIKNLQDLLAKQEGFTYIEYFKTLSLNDFKTLNPNFNIPLKALAYRADVRSK
                     LNSLKSAFKDYSSMQKSILPSISLGGALSGSDKNFDDSFKFEILSGNVKISLPFLDYG
                     RVKQNIKISQFTYEQLLISYEQALQSAMNEFVLNYKDYQSNTLLLQNLQNINTKQEFI
                     TKTYHEKYILGKSELKDYLDANNTLNSTQQEFLRARFNLLKTINAYYQITALSFNDEN
                     LESLKY"
     gene            complement(19591..20769)
                     /locus_tag="RTF91_000660"
     CDS             complement(19591..20769)
                     /locus_tag="RTF91_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HDZ4943573.1"
                     /translation="MLVNKFNFILLFFIIFTSSYAQNLNTNDTINSILNQNKNHPALT
                     SYASKKDLKNLEKKLENNQNIGVRIYGDSHIAADFFPRVIRGYLIRSNSIGFAYPLQP
                     KYQQNLNLVYSYKNFEILNSRNPANAEYNFPLGGVIAKAKIKGAKINLDTTLDKKNFK
                     IGFLFKAKQNTNAFSIKDAKNRSYELRSTQTNKWSYKELELDFPLRISALQKDAELGG
                     YFITNKNNNVFLDTIAINGAKSDLWLSWNQAVVQKELQLLHNDLIILAYGSNDALFKG
                     FEKQKFKNNLKKWINILKTHNKNAIIILIAPPTVVQKEGKNYKLAPDFFTIRKALYEV
                     AKEEKTLIFDMHKFMQDSGGKNKWIEQKLSLNDVHLTIKGYELMAKKLLDDLKNIINY
                     "
     gene            complement(20756..21772)
                     /locus_tag="RTF91_000661"
     CDS             complement(20756..21772)
                     /locus_tag="RTF91_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HDZ4943574.1"
                     /translation="MSVIRFFFILIIVLGLVVVVMNQSISSYIEQKYHFAFYPHNDLL
                     KEANGFKIKLEQIRAILSNEPLPQANEEVANQENKSTDENLSKIPLDKTSSALESDKN
                     TSHKETNLTLIQDTNISFIDNTKLELQNGDEFLFIGDSLMQGVAIALNKDLRNLNLKV
                     TDLSKQNTGLSYKSYFDWSKAINEAFVKNSNIKYLVVLLGTNDPWDIKKGGNYHHFGS
                     PSWIDIYTNRVDEIIKIAKKHKVKVLWFEIPPVKKEDLNKKIQVLNKIYRNEILKNKE
                     IFINTKLFFSVNDEYSAYIKDGNNKSIKVRTDDGVHFTPNGAREMSKLLLEHIKLKEK
                     NASK"
     gene            complement(21773..23149)
                     /locus_tag="RTF91_000662"
     CDS             complement(21773..23149)
                     /locus_tag="RTF91_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HDZ4943575.1"
                     /translation="MTYFSLEFSILMIAFFAIYWAFKNDYKIQNILILIFSYIIYILI
                     NPYFALVLFIYTFFIHYFALLIFVRRKRYIFATCMAFIILNLCFFKYFPSIKGSIDEI
                     LNFFGLNFLNIDLVLPIGISFYTFTSITYLVEVYQKRRLESFLNLATFLSFFPTLLSG
                     PIMRSSFFFEQAYQKREFKHANLIIILLVFGIVKKVLIANYLGIYAKSILDFPQSYNF
                     IQLLSAVYAYAVQIYCDFSGYVDLVCAFALMLGFTLPPNFNMPYLAKNLKDFWARWHI
                     SLSTFIRDYIYIPLGGNRKGMPRTIANILIAFILSGMWHGNTLAFVAWGLLHGIGIIF
                     IHLLTLSKFSLQKIPALGRFLTFQFVCFTWIFFYYSKNLDDAVEYFKACYYNFFQIPS
                     YNDIYMLVAFGILFMIYPLFVNFKEYCIKILNLTPFLLKPFIIAFILLLVFAFMPNGI
                     PDFIYSSF"
     gene            complement(23192..23683)
                     /gene="ctf"
                     /locus_tag="RTF91_000663"
     CDS             complement(23192..23683)
                     /gene="ctf"
                     /locus_tag="RTF91_000663"
                     /EC_number="1.16.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HDZ4943576.1"
                     /translation="MLSKEVVKLLNEQINKEMYAANLYLSMSSWCYENSFDGAGAFLF
                     AHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFKSLLDVFEKTYEHEQFITKSIN
                     ALVEHMLAHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYIKN
                     IAK"
     gene            24028..25023
                     /locus_tag="RTF91_000664"
     CDS             24028..25023
                     /locus_tag="RTF91_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDZ4943577.1"
                     /translation="MKKILSLSVASFAFCGVLNAADLKIAGSSTVYPFTSFVAEEYAS
                     IKNAKTPIVESLGTGGGFKVFCEGTTDISNASRPMKLSEFETCKKAGVTDIVGIMIGY
                     DGIVLAQNKTNTPLNITKKELFLALAKEIPQNGKLIPNPYTNWNQINKNLPNRKISVY
                     GPPSSSGTRDTIEELVMSDVSKKIPEYKGEYKTIRQDGAYIPSGENDNLIVSKLTIDK
                     DAFGIFGYSFLVSNSDKINAAIIDGVTPSEESIADEKYELARSLFIYINAKKNPKEAF
                     DFAKIYMNDDLAKSGGELEKIGLVPLSDDKLKISQKHVEDRKILTDDLVKAGKVF"
     gene            25033..25947
                     /gene="pstC"
                     /locus_tag="RTF91_000665"
     CDS             25033..25947
                     /gene="pstC"
                     /locus_tag="RTF91_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDZ4943578.1"
                     /translation="MLKEKIIKFVLFLCAFVSVIVSFAIMLTILIEALKFFQKESVIT
                     FLFSSQWAADTAFMNADGTSKQGVFGALSLFWGTFYISLIAMLTALPLGVMCAIYLGV
                     FAGKKSKNYLKPILEIIAGIPTVVFGFFAAIVVAPFIVWFFSLFGIQASFQSALGAGF
                     IMGIMIVPIVASLSQDCIEAVSEKRINGAYALGMTKKEVVFAVILPEAIPGIVAACLL
                     GLSRALGETMIVVMAASLRPNLTLNFLEDMTTVTVKIVEALSGDQAFDSSLALSAFSL
                     GLVLFIITLIINMFSVYLINRFHKRKNL"
     gene            25944..27032
                     /gene="pstA"
                     /locus_tag="RTF91_000666"
     CDS             25944..27032
                     /gene="pstA"
                     /locus_tag="RTF91_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012857620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDZ4943579.1"
                     /translation="MKKLFKKRQKTSKYFKRLCKMGLYINLVFLCIFLGSVAYLGIGA
                     FKQSYIFVEANRNSPAYDLLSRAEQRKIRIGQITEKTWLLANSEVDQYMKQKYNRLNE
                     KQRVLVDDLVQKGEIELKFNSNFFLNGDSKSPENSGILSSVIGTLLVMLVCMVVSVPM
                     GVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFINLFGMPRSSALVG
                     GLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIMLPLAMPMILTGS
                     ILALAGAIGETAPLMIIGMIAFIPDVASSIFDPTSVLPAQIYSWSAMPERAFLERTAA
                     GIIVLLGLLVVLNFSAILLRKYFQGKIK"
     gene            27029..27769
                     /locus_tag="RTF91_000667"
     CDS             27029..27769
                     /locus_tag="RTF91_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943580.1"
                     /translation="MIAKITNLNLFYGKKQALFDINMQIKQNKITALIGASGCGKSTF
                     LRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVVLRKNVGMVFQQPNVFVKSIYENISYA
                     PKLHGMIKNKDDEEALVVDCLQKVGLFEEIKDKLKQNALALSGGQQQRLCIARALAIK
                     PKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGE
                     LIEFGKSKEFFENPKQEKTKAYLSGAFG"
     gene            27830..28402
                     /locus_tag="RTF91_000668"
     CDS             27830..28402
                     /locus_tag="RTF91_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011812723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDZ4943581.1"
                     /translation="MLINQTYSIDSCDDVELNIKRESKLDFRLTYDNSKEIKAIICII
                     PGGAEDMNSYIYIDDYLARNYNVGIININYHCIGNRPHLGSSFYLDDIDKLILDTSLK
                     AINLNHVNVFGINSYEELNNTFINIDQEIEKLKLSQKLNQNYKLKTHVSFLPSKNEYQ
                     NFGIMQAMDILNAIFYIKENSPFKLMGGGE"
     gene            28399..>28726
                     /locus_tag="RTF91_000669"
     CDS             28399..>28726
                     /locus_tag="RTF91_000669"
                     /inference="COORDINATES: protein motif:HMM:NF022594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDZ4943582.1"
                     /translation="MKTILFGNSYGGYLANLCAKIAPWSIDFILDNSSFVDFFGNIFR
                     LIGFGKEIDFTRYHGTYNDRLFKNILMYLSDKTYWSSNKFSKNYFSNARKIIREPLNK
                     EHLKIQS"
BASE COUNT        10362 a         3688 c         4874 g         9802 t
ORIGIN      
        1 gatttttctt ttggaaaaaa tagggcttat aatgctaaag atattgagcc tttaagtggg
       61 ataaaaacca taatagttga tgagtttagt ataggtggca caggcgttca tgcgagttta
      121 attaagaact ttttagtaaa ggcaaatttg caaaaagcaa aagaattttt aggaagaaat
      181 tatagtatca aaggaaaggt ggttaaagga caaggattgg gatctaaaga gctttttgcg
      241 actataaatt tagactgtga gggttatttt ctacctcaaa atggtgttta tgctactttg
      301 ttaaaaagtc aaagaaaaat ttgtaaaagc gtgagttttt taggtataag atcaagtgat
      361 gaaaattttt ctatagaaag ccatatttta gaaaaattgg atgaaaattt tatgcaagaa
      421 gagtttttag aacttgaatt tatagctttt ttaagagaaa atcaaaaatt ccaagatttg
      481 aaaaaactta aaagtaaaat tgttaaagat ataaaacaag ctcaaaactt attgaggaaa
      541 agtgatgaaa gatgaacttt ttaaacaaag tcctaaaaaa caatttgaat ttgataaaag
      601 cgtagccagc gtttttgatg atatgatcaa tcgctctgtg ccattttata aagaaaattt
      661 ggaactttgt ggcaatttat tggctaaaat tttacccata aatgcaagta tttgtgattt
      721 gggctgttca agtgctaatt ttttgatttt tttggcaaat ttaagaaagg attttaaact
      781 ttttggcgtg gataattctg cttgtatgct tgaagttgca aagtcaaaag ctaaagctta
      841 tggtcttggt ataaattttt ttgaagctaa tttatgtgag tttgattttt tttcttgtga
      901 tgtttttgtg gcaaattaca ctatgcagtt tattcgtcct cctaaaagac aagaattgct
      961 taatgaaatt tataaaaatt taaattctaa gggtgttttg attatgagtg aaaaaattct
     1021 ttatgaagat gcttttttat ctaaaaacat tatagaactt tatgcagact ataagaaaaa
     1081 acaaggttat tctaaatttg aaattgcagc taaaagagaa gctttggaaa atgttttaat
     1141 tccttatagt caaaaagaaa atttaaatat gctagaaaag gcaggtttta agaaaataga
     1201 aagtattttc aaatgggcaa attttgaaac tttcatagct tttaaggatt agaattattt
     1261 tcattttccc attcgtcttt tggaaaacct attttatacg cattgacaca atcttgactg
     1321 atgatagctt tgtgcctgca ttctaaactt ctttttttag cttcttcggg gtggttttga
     1381 tagtattcta tgcttttagt ttgttcacat gctgtaaaaa atataccaac aagacttaaa
     1441 aaaagaatta ttttcatggc aatttctcct gtgttatgtt aacatcatcg ttgaaaatag
     1501 agctttgatt gttttctttc attttagaag aaggataaat tttaggaggt atttctgcta
     1561 tagatggaat tataatactt tcattatttt ctatgctttg attaagttct tttgtgaaat
     1621 catcctgttt taaagcttct aacatttcat tctcagactt tgttgtgtgc ttaggctgtg
     1681 tttgttctct tcgttttttg gtttaacgcc tacttttggt acattgatgc aatcttcact
     1741 aagagtttca ttttctttac attcttttgc tttgctagga tgatttttat agttgttttc
     1801 tctcttgtta tcacaggctg ttatatttat aattattaaa attgtaaaaa aaatacttag
     1861 tttttgcatt tgttaatttc ctaaaatttt taatatttta gcaaattttg tataaagcaa
     1921 tgataaatta tttttcttca ttataagaaa aaataggcaa agaccattga tatttgatag
     1981 ctaaaagtct tgcaataact cctataaaaa gagttaagag tgtgcagact agggtattaa
     2041 attcaagcca aattgtaagt gaatagtaga ttgttcctgc aattatggca attcctgcat
     2101 aaatttcctt ttgaaatact aaaggaattc tcatgcataa aatatctctt aaaattccac
     2161 caaaaactcc cgtgattaca gcagcagcaa cagcgatgat aaaaccaagg ttttgatcta
     2221 tggctatttg agcaccgagt atactaaaaa caacaagtcc tatagcatca agagttagaa
     2281 ataaactttc aagtttggtt actacacgtg gaatttttgt cgctacaagg gcgcaaaaac
     2341 agattaaaat aatatattca ggatgtttaa cccaagttaa agggtaatgt cctaagagta
     2401 catctcgtat acttccgcct ccaattgctg ttacgagtgc aataaaaata actccaaaaa
     2461 gatccatttt atggcgtcct gcagccaaag ctcctgtcat tccttctgct gaaatgccta
     2521 cgatataaag agtagttatg gtaagagcat ttatctccat aaatttatac cttaaaattt
     2581 gtcacaattt atttgatatt gtttaatatt ttcatcgctt acttgatgat ttggtacttg
     2641 gtagcattct ttaaattttg gagttttgat gattttgata taaaaacttg gtatagcgat
     2701 atgattttta atatatttta gctctttatc ataaagcact aaatttaaaa cctcaatact
     2761 ttgaaatttt aaagctaaac ttttttcttt ttgttcgatt tcattccaaa ttttattatt
     2821 tatttgtgcg ttttgcggag tgatattact cattaaaaat actgaatttt gagcagcttt
     2881 attaaaatta aaagaagcat taggtgcggt gtgtccgcgt gtgtagccac tgtttttata
     2941 atcactccaa gtagtgcggt attttttagg gatatttgta tcatcttcaa agcgcggacg
     3001 ttttttaatt tgcttgtctt ttaaatttga agcttctact ttataagcaa cagcttttgt
     3061 gcctttaagt ttgtaatcat agcaatttaa ataaaaaaat ttatctaaaa cttgcgagca
     3121 atttatattg ttaaaataag aagaaaaatc agcactaggc ttataagctt ctaaggcaaa
     3181 aacatgaaga gagatggtaa gcaaaaagat gaaaattttc atttaagttc cttatcttta
     3241 cttttacaaa gatgatttaa aaaacattct ttacataaag gttttttagc tttacaggta
     3301 tagcgtccaa aaagcaccat ggcttgatga agataattaa gattgtcttt aaaaatacgc
     3361 gttaaatctt cttctgtaga ttctggagtt tttgctttgc taagtcctaa acggtgagaa
     3421 actctaaaaa catgagtatc tacagccatg aaatttgcac cacaccattc gattaaaact
     3481 acatgagcag ttttttgtcc tacacctgct aaggatttta aattttgctc atcaagagga
     3541 atttctccat tgaaattttc gcaaactgct tttgccattt ttataagatt ttgtgcttta
     3601 ttgttaaaaa atgagcaagt ttgtatatag gtcttgaggc ttgataagtt tgcatttgca
     3661 agagctttga tatcaggata agctttaaaa agatcaggcg tgatgagatt gactctttta
     3721 tcagtgcatt gagctgaaag cattacacag actaaaagtt cataaagatt tgaaaattta
     3781 agttctgtta caggcttatt aaaatgtttt aaaaaaagtt ctttgatttc taaatttctt
     3841 ttcatttttt aattttagtt aattagcttt aaaccaagtt tagatataat tgattttata
     3901 tattttatta aaaaggaaac ctaatgaaaa aattttcttt agttgtagca gctttgattg
     3961 cgggtgtagc tttaaatgtg aatgcagcta cagtagccac tgttaatggt aagagcatta
     4021 gtgatgcaga ggtaagtgaa ttttttgctc ctatgcttag aggacaagat tttaaaactt
     4081 taccagataa tcaaaaaaaa gcacttattc aacaatatat tatgcaagat ttaattttac
     4141 aagatgctaa aaaacaaaat ttagaaaaag atcctttata cacaaaagaa cttgatcgtg
     4201 caaaagatgc gatacttgtt aatgtttatc aagagaaaat tttaaatact atcaaaattg
     4261 atgcggctaa agtaaaagca ttctatgatc aaaataaaga taaatatgta aaacctgcaa
     4321 gagtgcaagc aaaacatatc ttagtagcga cagaaaaaga agctaaagat attattaatg
     4381 aacttaaagg tttaaaaggt aaagaattag acgctaaatt tagcgagctt gctaaagaaa
     4441 aatcgattga tccaggttca aaaaatcaag gtggtgagct tggttggttt gatgaatcaa
     4501 ctatggtaaa accttttaca gatgctgctt ttgcacttaa aaatggcacc attaccacaa
     4561 ctccggtcaa aacgaatttt ggttaccatg tgattttaaa agaaaattca caagctaaag
     4621 gtcaaatcaa atttgatgaa gtaaaacaag gtattgaaaa tggacttaaa tttgaagaat
     4681 ttaaaaaagt tatcaatcaa aaaggacaag atcttttaaa tagtgccaaa gtggaataca
     4741 aataatgggt gttttagaca ttgtaaaagc aggggtgatt agcggggatg agcttaataa
     4801 agtttatgat tatgctaaag cagagggttt tgccattcct gctgttaatg ttgtaggaac
     4861 tgattctatt aatgcggttt tagaggctgc aaaaaaagtt aattctccag tcattatcca
     4921 gttttcaaat ggcggagcaa aattttatgc agggaaaaat tgtcccaatg gagaagtttt
     4981 aggtgcgatt agtggagcta aacatgtgca tttacttgct aaagcttatg gtgtacctgt
     5041 gattttgcat actgatcatg ctgcaagaaa acttttgcct tggattgatg gacttattaa
     5101 agccaatgct gaatataaaa aaaaccatgg gcaagcttta tttagttctc acatgcttga
     5161 tcttagtgaa gaaagtttag aagaaaatct tagcacttgc gaggtttatc ttaaaaaact
     5221 tgatgcttta ggtgtggcac ttgaaataga actaggttgc acaggcggcg aagaagatgg
     5281 agtggataat acaggtattg ataattccaa actttatact cagccagaag atgtagcact
     5341 tgcttatgaa agacttggaa aaatcagcga taaattttca atcgcagcaa gctttggaaa
     5401 tgtgcacgga gtttacaaac cgggaaatgt tagcttgcaa cctgaaattt taaaaaattc
     5461 acaaaaattt gttaaagata agttcactct aaataatgat aaacctataa attttgtatt
     5521 tcatggtggt agcggtagcg aactaaaaga tattaaagat gcgttaagtt acggcgtaat
     5581 caagatgaat attgacacag acacccaatg ggctttttgg gatggagtgc gtgaatatga
     5641 atttaaaaat agggcttatt tgcaaggaca aattggaaat ccagaaggtg atgacaagcc
     5701 aaataaaaaa tattatgatc cacgtatttg gctaagaagt ggtgaagaga gtatgataaa
     5761 gcgtcttgaa attgcttttg aggatttaaa ctgtataaat aaaaactaag tcttttaaag
     5821 gcttagcttt attttgtttt aaaaattttt atcaaataag tagcaatctt taaaataaaa
     5881 ttaatggggt attggtttca tggatatcaa atcagatgaa atttcagaac ttgttttgcc
     5941 cgaaggcaaa gatgtaagag gttctttagt ttatttaaaa attattttta ttccagcttt
     6001 tctttatgtt ttgattttat tgggttattt taatgtaatc gattttaaag ttgaattaca
     6061 tacggttgtt atgacaggtg tgattttttt tacagcgttg atttttgcta gacatagtgc
     6121 tgagtatgca tatagcattt ttgaacaaca aaaagatgaa tttaaacaag ccttaaaaag
     6181 acatatcatg agacattttc ttgctatagg aaaagataca aaatcaaatg ctaattttga
     6241 tgactttgct tatacatata ttaaaggtgc aagaaatgag aattttgcta gtataggttc
     6301 agcaattttt ccaatgatgg gaattttggg aacttttatc agtatagctt tttcaatgcc
     6361 aaattttagt tctagtgata tagcggcttt agaacaagaa attgcagatt tattaagtgg
     6421 agtaggaact gctttttatg tttcgattta tggaattttt cttgcattat ggtggatgtt
     6481 ttttgaaaaa tatggcaaaa gtaaaataga acgtttatta aatcgtcaaa aaaatgctac
     6541 aagtggattt ttttggacaa aagaagagct tgatcaaaga tatttaagtg agagtttgca
     6601 gtattttgaa aaaattgggg aaatttttaa acaagttagt aatgatgatt tttttgcaga
     6661 acttgatcat gctattgata gaaaatttgg tatttttcaa gatatgttaa atgtagagga
     6721 aaaagctatt agattaagca gtgaacacat caaacaaacc atgggtgagc ttagtaaagc
     6781 acaaagagat caacgtgatc ttggaaaact ttatagtgaa atgttaaatg gtataggttt
     6841 attaaatcaa aatttaaaag aaatcaatac aagaatgtca gaacaatata atcgcttact
     6901 cgatattagc agtgataaaa ttcaccatct tgataagaca ttaagtgcat ttgatgaaaa
     6961 aatagagcgt tttggtaaga atttcgaact ttatgaaaaa gcaatgttag aaagtcaaga
     7021 aaaggttttt gaaggattta aagcaagtct atttgaaggt atgcataaat ttaaagaagt
     7081 atatgaagaa gaaaaaagca ttgatgataa aatcaaaatg atggatgagc ttaaaaaaga
     7141 aataaaagcg cttgatgaag aaacaaatca aatgatgagc aaactttctg gagatgaaag
     7201 tcaaagcaaa gaagatgaag ctaaacaaat agaggatttt tcagaatcta aggttgaagt
     7261 aaatcaagat ggagttaaaa cagaaatatt caagcaagaa agcaatgatg agttaaaaaa
     7321 tgaagataaa gaaaataaat gaaaaatgag tcaaaagaag atagcaattt ttggatagct
     7381 tatgctgatt taatggcagg attgctgttt gtttttattt tgctaatagg tgctattgtt
     7441 gtaaagtatg ttttaactca aagtgattta aaagaaatta aagataatct taatagacaa
     7501 gaagcacgct tagaagaaag taaagaagaa cttagaaata aagaagctat agtgtttaaa
     7561 ctaagctctg atttaaataa tgcttctagt gctttaaatc ttgccaattc tcaaaaagcg
     7621 gaattagaag ctaatattac aagttataaa caattaagca aagatttaaa ctcaacttta
     7681 gataacaaag ataaacaaat tttgatttta cttggtcaat tagagaaaaa agacgaagag
     7741 cttaaaaatt tacaagaaga ttttcaaaaa gctaaagaaa aggtgcaaaa tcttggctta
     7801 atccgtgaaa atttaagcaa ggagttgcaa agtaaacttg ataataatat tactatagac
     7861 gaaaagacag ggtctatttc tttacctgct gaagtacttt ttgataaaga ttcttatgtt
     7921 ttaaaaaatg aagcaaaggc aagtttaaga aaaattttaa gtgaatattt tgatgctatt
     7981 cttgaagatc caaaaattct ttctaatatt gaaaatatta tcattgaagg acatactgat
     8041 agcgatggat cttatattta taatttagat ttgtcacaaa aaagagccta tgaggtaatg
     8101 aatttcatct atacttttta caagagtgat aagctccaaa agcttttaat ggcaagcggg
     8161 cgttcttttt cagatcctgt atttctcaat ggagttgaag ataaggacaa gagtcgtcgt
     8221 atagaaataa aatttagcgt taaaaatgat aatgctttaa aagatgtaga aaaattcttt
     8281 gaatttcatt aaaacgatca gtcctataca aaaaattaat tttaatgggt ttgaatttta
     8341 tgtcaaaaga gatgatttat taggagaaat taatggaaat aaagccagga aacttgcttt
     8401 ttatctttat caaaaatatc ctaaaaatca atgttttata agttatgggg gaactcaaag
     8461 taatgctttg gcagcattga gtatttttgt taaacaaaga tggtgcaagc ttatttttgc
     8521 ttgtgaaaaa atttctgctt ttcttaagaa taatcctcgt ggaaactatg ctttagcttt
     8581 gcaaaatggt gtagaatttg tagaaaatac tcattcttta tctttgaagc aatttgcttt
     8641 gtctttgtgt aaaaaagatg atatttttat agaacaaggc atagctaatt tggaagccga
     8701 atatggttat atagaacttg ctcaagaaat tcaaatgcaa agcgaaagat taaaacttga
     8761 ttttgatatt tttttacctt caggtacggg tacttcagca gcttttttgg cgaagcattc
     8821 taaatttaaa gtgtttactt gcacttgtgt gggtgatatt aagtatctta aaaaacaaat
     8881 tttaacacta gttccaaact atgatttttc taatttggaa attttaacaa gtgataaaaa
     8941 ataccatttt gctaagccat ataaagaatt ttatgagctt tatatggatt tgaaactaaa
     9001 atgcaatata gaatttgatt tgctttatga tattttagga ttaagcatgg tattaaaaca
     9061 agagtggaaa aaacctttgc tttatataca tcaaggtgga attttgggaa attctactat
     9121 gctagaaaga tataatttta aaaaattagt ttaaaattcc ataaataaaa ataatcaaga
     9181 tgattaaagg tactatatat ttcacataat aaaaccaaat tccaaaccat gaacttttaa
     9241 gtgtattgtt gttgctaagt tcttttagac tttcttgttt acctaaaacc caacctacat
     9301 aaatacagca aaaaaacgca gttaagacaa ataaaatgtt accactaata aaatcaaaac
     9361 tatcaaaaat attttttcct ttaatgataa taatatcacg ccaaggccca taggttagaa
     9421 tgcaaggaag attaccaagt atgaaaataa atcctaaggt taaattaata gaaagatttt
     9481 tagaatattt aaatttttct tctaatacat tgataataac ttgataaatt ggtaaactcg
     9541 tggttagagc tgcaatcaag agtaagataa aaaacaaaat acatataata gtgccaaaat
     9601 ggatatgtga aaatgctata ggtaaagttt caaaaactaa agaaggccca ctatctggag
     9661 caagtcctgc cgaaaaaagt gctggaaaaa tcataaaacc ggctaaaaca gctatgatgg
     9721 tgtttaaaat ccctgtataa atagcggttt ttgccatatt ttcattttta ttaagatgtg
     9781 atgaaagtgt tatcattact ccaaaaccta gagatagagc aaaaaagact tgtcctaaaa
     9841 catcaattaa aagctttgat gataaaattt tgctaaaatc aggctcaaga tagaatttaa
     9901 ccccagccat agctccatca agggttaaat tgcgcccaac aacaataacg agacaaataa
     9961 ataacaaagg cattaaaaat tttacagatt tttctatacc atctataatg cctcttttta
    10021 aaataatata attaacaatt acaaaaacag tggtaaaaat accaattcct aaaggattga
    10081 aagctatttt atcgttaaaa aaccgatgag tgaattcttt gcttactaca ttagcaagac
    10141 taaaatttcc tagcgttaat tcccagatat aaactaaaac ccatcctcca agcaccatgt
    10201 aataagccat tataccaaaa cttcctaaaa gtcccatata tccaatgctt tgccattttt
    10261 gtttaaaagc atctacgcta tttgtcattg cttttctgcc tatgacattt tcaactaaaa
    10321 taacagggat gcctatgata atcatagcta tacaaaaaac taatacatag gcaccgccac
    10381 cattttctcc tacaagatag ggaaaacgcc aagttgctcc aaatcctatg gttgctccag
    10441 caactgttaa aatataagtt agcgtgctac tccatgtttg tcttcgcatg attatccttt
    10501 ctaaaaagaa ttattttatc taaaaataac tttaaaaaat tataagttat ccatatagct
    10561 tgtattataa gtatttttca agcgtttatg tacagtttcg taccaatttt gagatatgaa
    10621 agtgtttaat ttttctagtt tatctagtaa atttggattt tgcttaagaa tttgatacgg
    10681 ggaataaaaa agttgattaa gttcaaatac actaagcaaa atagaatttt tttctagaat
    10741 tttaatgttt tcagactttc gtatctttcc aacttgtaaa actttataat accatccact
    10801 caaaccggtt ttaaaaattt catgtgtaaa ttttggatta ttatgaattt ttgaaatttt
    10861 tacacaaggt tttctaggtt cgcttacttg taatattaca tttgaaactt gatgtatatc
    10921 gcctatgcaa acattttgtt cttgaagtcc attaatgctt aaattttcac ccatcatgcc
    10981 aaattttagc tttttattaa gaaatctttc ccatacgggg taattttgac aagaattggc
    11041 aaaaatggcc ttgtggtaac ctccatgatg aattttatca gctatttgat catctaagat
    11101 acctagaaaa tcaatttgcg tttcttctag atagatattt ttaacaaacg cactttggaa
    11161 atttttatag tttttaattt ttcctatctg taagctttga attttcatga ttctagcttg
    11221 tttaataaat catcagcact aataaagcct gtaattttta atttttcttt tccattttca
    11281 aagaaaatta aaacaggtgg accaaataca ttaaattctt tcatagtttt aatttgttcg
    11341 ctattgttct cacttacatc aactttgata agcttgtaat tttgcatttt ttgtacgatt
    11401 ctttcatctt taaaggttaa ctcatctaaa agtttgcaat tttcacacca agatgcagta
    11461 aaatcaagca ttaatggctt tgtgcttgtt tgtatttctt gttttagttg cttaagattg
    11521 ttgatataat cataacttaa ggcagagttt gttgtagata tagaattaaa atttaaagga
    11581 tttaagaaat ttttagctcc aaaaagtcct cctaagaaaa tacttagaga ataagttaag
    11641 acaagaatta aaatactttt tttaatttta gagattattg taaaactttt ttcaaaaatt
    11701 cccataaaaa cactaaaaaa tacacctaaa attccatagg caattaaaat gtaattattt
    11761 tcaatgattc tagaaagtat ccaaatagcc atagccaaca taacaaaacc aaagaaaatt
    11821 tttacttttt ccatccaaaa accaggttta ataaagccta atcccaagcc tatgaaaagt
    11881 aaaggcatac ccataccaaa actcatgata aaaagtgcac tgccacctaa taaagcatca
    11941 cctgtattag ctatataaat taaagcacct gctaaaggag ctgctacaca agggcctact
    12001 attaaagcgg ataaaaatcc cataatagct atacccataa gtcctttccc tttttcgctt
    12061 tttttgtgta taaaggtttg aaactttaat ggcaattcaa aacgaaaagc tccaaacata
    12121 gcaaaagcaa aagctatgaa gattagagca aaaagaatta aaacaacagg cttttgtaaa
    12181 attccttgaa cacttgctcc tagaaaactt gctataactc cggcaatagc gtaggtcaaa
    12241 gacataaaaa aaacatagac aaaagagaga aaaaagctgt gtttttttga aaatttggca
    12301 ttgctttttg ctatgataag agaagataaa atcggaatca taggtaaaat acaaggtgtt
    12361 aaggaaagca aaagtccata gccaaaaaaa cttagtaaaa tccaaaaaaa attatctgtt
    12421 gctaaaaaat ttgctataga gctttcttcg gatttgacat cggttttttt atttgttgtt
    12481 tgagctttgt aaggtttgga aatttcaaaa gcatcttttt tagaactaag atcaaaatac
    12541 caaatttgag gattataaca caagccttgt tcagaacaac cttgaaattc aagcttgatt
    12601 aaatttgtat cattttttgc aaagcgttct agtaataaat ttggcaaagc taaattcaat
    12661 ttttgataat aaacatgttc attgcctctt gtagagcttt gaggtaaatt aattaaagag
    12721 cttatatctt tttcatttat atataattta agtttattag aataaagata aatatctttt
    12781 ccaagttcaa tatcaattga gataaagtta ctataggagt ttgattttac attaaaagct
    12841 tcatttaaag acaatataga agcaaaacat aaacaaaaac ttaataaaat aataccaaga
    12901 atacgcataa atttcctaaa acttattttt ttagtttcca ttataattta ttatggtaaa
    12961 tttgctttat aaggtttaaa aaatgcagga aaatagttct ctaaaaacgc aagtggctac
    13021 aaaaaataat gaaatttatg tttgcgttgc aaagaaagaa aagtacaata gaatatgaaa
    13081 aagatttaaa aaatttgcaa attgagcttt taaaatttca aaattatgtt aaagcaaaag
    13141 gtttaaaagt tctcatactt atagaagggc gtgatgcagc tagaaaaggt ggagcgatta
    13201 agcgtttgat tgagcattta aatccacgtg gttgtggcac ttgaaaaacc tagtgatatg
    13261 gaaaaaatac agtggtattt tcagcgttat ataacacatt tactttcagc tggtgagatt
    13321 gtgatttttg atagatcttg gtataactgt gcaggagtag agctagttat gggtttttgt
    13381 acctcacaac aacataaaga ttttttaaag gaggtgcctt tgtttgaaaa tatgatttca
    13441 agcagtgatg ttattttttt aaatttttat ttttcagtat taaaagatga ataaaaaacg
    13501 ctttaagaaa cgccgaagcg atccgcttaa acaatacaaa ttatttcctg tggatcaaaa
    13561 atggcaagaa ttatgggata agtatattct tagctaaata tgctatgctt ttagcgtcta
    13621 atactctagc ttgcccttgg agtattattt tttctgatga taagaaaaaa gcaagattaa
    13681 atttattacg ctttatactt tctaaggtag aatatgcaaa taaaaaaact ggagattttt
    13741 ctaaattagt gtgtagtgga gaagaagaaa tacgaaagat gaaagcgaat ttagaaaaac
    13801 ttgatagtaa aaaagcagat gagaaaataa agatttagat taaggaatag aatgcaaaaa
    13861 ctagttgaaa atttagctct aaagtactat gataaaatag tttatttaag acatcaaatt
    13921 cacatgcatc ctgagcttga atttgaagaa gaaaatacag ctaatttagt gtgtgaaatt
    13981 ttagatgagt ttggtattaa atatcaaaga aatatcgcaa aaacaggaat tttagccatt
    14041 atagaaggga aaaagaagag tcagaaaaaa tcaaaatgtg ttcttctaag agcagatatg
    14101 gatgctttgc ctatacaaga aaaaactaat ctaagctatg cttcaaaaat tgatggtaag
    14161 atgcatgcat gtggacatga tgggcataca gcaggacttt taggggctgc tttaatatta
    14221 aatgagctta aagacgaatt ttgtggtata gttaaattta tgtttcagcc tgcagaagaa
    14281 ggaagcggtg gggctaagct catgatagaa tcagatgtat tagaaaatcc ttatgttgat
    14341 gcggtttttg gttgtcattt atggggggct ttgcttgaaa acactgttca aattgtaagt
    14401 ggtgaaatga tggctggaac ggatattttt gatttggaat ttattggcag aggaggacat
    14461 ggggcccatc cgcatacttg catagatcct atagttatgg caacgcaatt tgtaaataat
    14521 atacaaagtg ttgtttctag gcgtttagct ccttatgaag caggggtgat taccgtgggt
    14581 caaatttgtg caggaacaac ttataatgtt attcctgcaa atgcttattt gaaaggaact
    14641 gtacgctttt taaatgataa aacgcaagat attttaaaaa attctctaga gcaagtggct
    14701 gctgccacag caaaatctaa tggtggagat tataagctta aatatactaa agaatttccc
    14761 cctttgatta atgatgaaaa agctgcttta atagcaagaa aagcttttgg aaagcttttg
    14821 ggagaggaaa atattattat ttcttctaag cctgatatgg gggctgaaga ttttgctttt
    14881 ttaacacgcg aaagaatggg ggcttatgta tttgttggaa tttcgaaaga tttaaatcat
    14941 ccagtcttgc accatagttc tactttttgt tgggatgatg aaaatttaaa agtattaatg
    15001 caaggtgatg taatgatggc tttggagttt ttaaatttat aaaacataca attaaaattc
    15061 acaaaaaatt cacaaagaat gagtaaaatt taatccttaa tttttcttta ggatttgtta
    15121 tttatgaaaa agaagattat tttaattatt ttaattgtaa tacttggaag tattggggct
    15181 tattttattt tttttaacaa tgatgaaaaa attagctatt taactcaaaa aatacaaaaa
    15241 aaagatatat ctcaaactat agaagcagta ggaaaggtat atgctaaaga tcaagtagat
    15301 gtaggtgctc aagttagtgg gcaaattata aagctttatg tggatgtggg aactcatgta
    15361 aaacaaggtg atttgatcgc tcagattgac aaagataaac aacaaaatga tttagatatt
    15421 acaaaagctc aacttcaaag tgctaaggct aatttagaaa gtaaaaaagt tgcccttgag
    15481 attgctagca aacaatatca aagagagcaa aaactttatg cagctaaggc aagttcgctt
    15541 gaaaatttag aaactcaaaa aaataattat tatactttaa aagccaatgt tgcagaactt
    15601 aatgctcaag tagttcagct tgaaatcact cttaaaaatg cacaaaagga tttagactat
    15661 acaaccatta gtgcgcctat ggacggtgtt gtgattaatg tggctgttga tgaaggacaa
    15721 accgttaatg cgaatcaaaa cacccctact atagttcgta tagctaattt agatgagatg
    15781 gaagtaagaa tggaaatagc agaagctgat gtgagcaaga taaaagtagg aacagagctt
    15841 gatttttctt tgctcaatga tcctcaaaaa acttatcatg ccaagatcgc aagtatagac
    15901 ccggctgata ctgaagtgag taattctact acaagctcat caagttcagg ttcttcaagc
    15961 tcaagttcat ctaatgctat ttattattac gcaaaatttt acgtagctaa taaagatgat
    16021 tttttgcgta ttggcatgag tatacaaaat gaaatcgtcg tagctagtgc aaaagctgtt
    16081 ttagctgtgc caacttatgc gattaagagt aattcaaaag gctattatgt tgaaatttta
    16141 gaaaatcaaa aagcagttaa aaaatatgtt aaactcggta ttaaagattc tatcaatact
    16201 caaattttag aaggtgtgaa tgaaaatgaa gaattgatag taagttcaag tgctgatgat
    16261 ttagctccta aaataaagtt gagattttaa tgatttttct taaaaatatc tgcaaaaata
    16321 tagccgaaaa tgccatttta aaaaatgtaa gtttaagtat agaaaaaggc gaatttgttg
    16381 ctattatagg acaaagtggg agtggtaaaa cttcgctttt aaatatcata ggaacgctag
    16441 atacgccaag tagtggaact tatgtttttg atcagtatga agtaactaaa cttgataacg
    16501 atgaaaaagc aagattaagg cgtgaaaaaa taggttttat atttcaaaga tataatcttt
    16561 taaccttgct tagcgctaaa gaaaatgttt ctttacctgc agtttacgca gggaaaaata
    16621 tacaagaaag aaatcaaaat gctaaaaaac ttttaaacga tttagaatta gctcataagt
    16681 tagaatctaa gcctaatgaa ttaagcggag ggcagcaaca gcgcgtttct atagcaagag
    16741 ctttaatgaa tggtggagaa cttattttag cagatgagcc aacaggagct ttggatagca
    16801 aaagtggtat tatggtgctt gaaattttac aaaaacttaa tgcacaaggt catactatag
    16861 ttttagtaac tcacgatcca aaaattgcag cacaagcaaa aaggattata gagattaaag
    16921 atggtgaaat tttaagtgac actaaaaaag aaaaaattca agaaaaacac actttaaaaa
    16981 caatgcctaa agagaaaaaa acactcactt tgcttaaaaa tcaagccttt gagtgtttta
    17041 aaatagctta ttcttctata cttgcacata aacttcgttc tgttttaact atgctaggaa
    17101 tcatcatagg tattgcttct gtagtttgtg ttgtagcctt agggttaggt tctcaagcta
    17161 aagtgcttga gtctattgca agacttggaa caaatactat tgaaattcgc cctggaaagg
    17221 gttttgggga tttacgttca ggtaaaacaa ggcttaattt tagcgattta gaaacgctaa
    17281 gatctttaga gtatttagaa gcggttgatg cttattcaaa cacttcagga gtagcaactt
    17341 atacaaatat ttccttaagt gcaagagctg aaggggttgg agccaataat tttgctatag
    17401 agggtttaag gatagatgca ggaagaattt taaacaatga tgatgtaaaa aatagtacca
    17461 atgttgccgt gttagatttt aacgctaaaa aaaatctttt tcctgctgaa aaaagtgaaa
    17521 atattttagg tcgtgtggtg ctttttaact ctcagccttt taagataata ggggttttac
    17581 aaaaaaatac agacaagcct atagaagata atgtagtgcg tctttatata ccttatacaa
    17641 cactgatgaa taaacttaca ggtgatagaa atttgcgtga aattatcgtt aaggttaaag
    17701 atgaggtgag ttcaacttta gccgaaaatg ccattataag aattttagaa attaaacgcg
    17761 gacaaaagga tttttttact tttaattctg atacttttaa gcaagccatc acagcaaaca
    17821 aacgcactac aaccatactc accgcttgtg tggcagtgat tgctttgatt gttgggggta
    17881 taggagtgat gaatattatg cttgtttctg taagcgaaag aacaagagaa ataggcattc
    17941 gtatggctat aggggctaga agagaagata tcatgatgca gtttttaatc gaagcggtta
    18001 tgatttgtac tataggagcg attttaggtg tgattttgtc catttttatt atttttgctt
    18061 ttaatacttt aagtacagat tttcctatga ttttaaatgc ttattctgta cttttagggc
    18121 ttttaagctc catgtttatt ggtgtgattt ttggcttttt ccctgcaaga aatgcagcaa
    18181 atttaaatcc tattagtgct ttgtcaaagg aataaaatga aaataatact tagcattttt
    18241 tttagcattt ttttaagtgc ttgtggtgca aaacttagct tgcctaagga aattagtttg
    18301 actcaagaac aaatgaaaga tttaaatctc acttatgatt ggtataagtc ctatgataat
    18361 gtaaaattaa atgaattttt aaattttgtt ttgttaaata atagcgatat taatatcgct
    18421 agaaaaactt tgctttcagc tttagctagg gctgatttaa ttaattatga tttatatctg
    18481 actttaagtg gaaatttagg ttttggtggg gataaagact taaattcagg caaacaaagt
    18541 aaaaatttta ataattcttt aaatttaagc tatgaacttg atatttatgg taagttaaga
    18601 gatagtgcaa gtgcaagtga atttaatgca aaagcaagtg cttatgatct tgaaaattta
    18661 aaaataagca tgatcaatac agccttaaat gatgtttttg aactggctta ttttaacgat
    18721 gtagataaat tgctccaaac ttattttgca aatttagagc aaatgaaaga gctttatagt
    18781 tataaatatg aacttggaaa aatagaagaa ttagatcttt taaatataga gcaaagcttg
    18841 ctaagagcca agcaaaattt attaaacaat gatcaaaatc gcaatttgct tataaaaaat
    18901 ttacaagatt tattagcaaa gcaagagggt tttacttata tagagtattt taaaacctta
    18961 tctttgaatg attttaaaac attaaatcct aattttaata tacctttaaa agctttagcg
    19021 tatcgtgcgg atgtaagatc taagcttaat agtttaaaat cagcttttaa agactattct
    19081 tctatgcaaa aatctatttt gccgagtatt tctttaggtg gagcattaag tgggagtgat
    19141 aaaaattttg atgatagttt taaatttgaa attttaagcg gtaatgttaa gatttctttg
    19201 ccttttttag attatggtag agtaaagcaa aatattaaaa tttcacaatt tacttatgag
    19261 caacttttga tttcttatga gcaagctttg caaagtgcga tgaatgaatt tgtattaaat
    19321 tataaagatt atcaaagcaa taccttgctt ttacaaaatt tgcaaaatat taatactaaa
    19381 caagaattta ttactaagac gtatcatgaa aaatacattt taggaaaaag cgaattaaaa
    19441 gattatttag atgcgaacaa tactttaaat tctactcagc aagaattttt aagggctaga
    19501 tttaatcttt taaaaaccat taatgcttac tatcaaatta cagctttaag ctttaatgat
    19561 gaaaatctag aatcacttaa atattagttt ttaataattg atgatatttt ttaaatcatc
    19621 aagtaatttt ttggccataa gttcatagcc ttttatagta agatgcacat catttagtga
    19681 aagtttttgt tctatccatt tgttttttcc accgctatct tgcataaatt tatgcatatc
    19741 aaagataaga gttttttctt ctttggcgac ttcatataat gctttgcgta tggtaaaaaa
    19801 atcaggagca agtttatagt ttttgccttc tttttgtact acggttggtg gagcgattag
    19861 tataataata gcgtttttat tatgagtttt taaaatgtta atccattttt ttaaattatt
    19921 tttgaatttt tgtttttcaa aacctttaaa gagtgcgtca ttagaaccat aggcaagaat
    19981 aatcaaatca ttgtgtaaaa gttgtagctc tttttgcaca actgcttgat tccaagaaag
    20041 ccatagatcg cttttagcac cattgattgc aattgtgtct aaaaaaacat tattattttt
    20101 atttgtgata aagtatcctc ctaactcagc atctttttgc aaggctgaaa ttcgcaaagg
    20161 aaaatcaagt tctaactctt tataagacca tttattagtt tgtgtgcttc ttaactcata
    20221 acttcgattt tttgcatctt tgatgctaaa agcattggta ttttgtttag ctttgaataa
    20281 aaatcctatt ttgaaattct ttttatctaa agttgtatca agattgattt ttgcaccttt
    20341 gatttttgct tttgctataa ctccgcctag tggaaaatta tactcagcat tagcaggatt
    20401 tctcgagttt aaaatttcaa agtttttata agaataaaca agattaagat tttgttgata
    20461 tttgggttgt aaaggatagg caaagcctat ggagttagag cggattaaat atcctcttat
    20521 aacacgcgga aaaaaatcag ctgctatatg ggaatctcca taaattctaa ctcctatatt
    20581 ttgattattt tctagttttt tttctaaatt tttaagatct ttttttgatg catagcttgt
    20641 taaagcaggg tgatttttgt tttgattgag tatagaattt attgtgtcat tagtgtttaa
    20701 attttgtgca taagaactag taaaaataat aaaaaataat aagataaaat taaatttatt
    20761 tactagcatt tttttcctta agttttatgt gttctaataa aagtttagac atttctcttg
    20821 cgccatttgg ggtaaaatga actccatcat ctgttcttac ttttatgctt ttattgtttc
    20881 catcttttat ataagctgag tattcatcat tgacgctaaa aaataattta gtattgataa
    20941 aaatttcttt gtttttgaga atttcgtttc tgtaaatttt attaagcact tgtatttttt
    21001 tgtttaagtc ttcttttttt acaggaggaa tttcaaacca aagaactttg actttatgtt
    21061 ttttggcaat tttaatgatt tcatctacgc gatttgtgta aatatcaatc caagaaggag
    21121 agccaaaatg atgataattt cctccttttt taatgtccca gggatcatta gtgccaagaa
    21181 gaacaacaag atatttaata tttgagtttt taacaaaagc ttcattgatt gcttttgacc
    21241 agtcaaaata ggatttataa gaaagtcctg tattttgttt gctaagatca gttactttaa
    21301 ggtttaaatt tcttaaatct ttatttaagg ctattgcaac accttgcatt aaagaatctc
    21361 cgataaataa aaactcatct ccattttgta gttctagttt ggtattgtca ataaagctaa
    21421 tatttgtatc ttgaatcaag gttaggtttg tttctttgtg agaagtgttt ttatcgcttt
    21481 ctaaagcact tgaagtttta tctaaaggaa ttttacttaa gttttcatct gttgatttgt
    21541 tttcttgatt tgcaacttct tcattggctt ggggtaaagg ttcgttgctt aaaattgcac
    21601 gaatttgttc taatttaatt ttaaagccat tagcttcttt taaaagatcg ttatgaggat
    21661 agaatgcaaa gtgatatttt tgttctatat aagaactgat gctctgattc ataaccacaa
    21721 cgactaaacc aagtactata attaaaatga agaaaaatct aattacactc atttaaaaac
    21781 tcgaataaat aaaatcagga attccatttg gcataaaagc aaaaactaaa agcaaaataa
    21841 aagctataat aaaaggtttt aacaaaaatg gagtaaggtt taaaatctta atgcaatatt
    21901 ctttaaaatt aacaaataaa ggatagatca taaaaagaat tccaaaagcg actaacatat
    21961 aaatatcatt ataggatgga atttggaaaa aattgtaata acaggcttta aaatattcta
    22021 ctgcatcatc taaattttta ctataataaa agaaaatcca agtaaagcat acaaattgaa
    22081 aggttagaaa tcttcctaag gccggaattt tttgtaaact aaatttgctt aaagttaaca
    22141 aatgtataaa aattatgcca ataccatgca acaaacccca tgcaacgaaa gcaagcgtat
    22201 tgccatgcca catacctgag agtataaaag caatgagtat gttagctatg gtgcgtggca
    22261 ttccttttct gttaccccct aaaggtatat agatatagtc tcttataaag gttgaaagac
    22321 taatgtgcca tctagcccaa aaatctttta gattttttgc tagataaggc atgttaaagt
    22381 taggtggcag agtaaagcct aacattaagg caaaagcaca aactaaatca acatatccgc
    22441 taaaatcgca gtatatttga actgcatagg cgtaaactgc acttaaaagt tgtatgaaat
    22501 tataagattg tggaaagtct aaaatgcttt tagcataaat tccaagataa ttggctatta
    22561 aaactttttt aactatacca aaaacaagca agatgataat taaatttgca tgcttaaatt
    22621 cgcgtttttg ataagcttgt tcaaagaaaa aagaacttcg cataataggc cctgaaagta
    22681 gcgttggaaa aaatgataaa aaggttgcta aatttaaaaa gctttctaaa cggcgttttt
    22741 gataaacttc aacaagataa gtgatggaag taaaggtata aaaactaatt cctattggta
    22801 atactaaatc aatatttaaa aaatttaaac cgaaaaaatt taatatctca tcaatactcc
    22861 ctttgatact aggaaagtat ttgaaaaaac ataaatttaa aataataaaa gccatacaag
    22921 tggcgaaaat ataacgcttg cgacgcacaa aaattagcaa ggcaaaataa tgtataaaaa
    22981 aggtgtatat aaataaaacc aaggcaaaat aagggttgat taaaatataa ataatataag
    23041 agaaaattaa aattaaaata ttttgtattt tataatcgtt tttaaaagcc caataaatag
    23101 caaaaaaagc tatcattaaa atgctaaatt ctaaagaaaa ataagtcata gcttcaatcc
    23161 aaagcgagat ttgcccacaa tagggcaaat attattttgc aatatttttg atatattgat
    23221 cagctaaata aagtccgttt ccgtgttctc cgattaattt aattttatca actataccac
    23281 ggaaaagcgc ttcctcttcg tgttgttcgc ttacatacca ttgtaagaaa ttaaaagtag
    23341 aatagtcttt atgtgctagc atatgttcaa ctaaagcatt gattgatttt gtgatgaatt
    23401 gttcatgttc gtaagttttt tcaaaaacat caagtaagga tttaaaattt tgttcaggct
    23461 gttttacttc ttgaagttct acatgagaat ctgtttcatt aagataagtg ataagctttt
    23521 tagcatgatc actttcttcg cttgcatgtg caaacaagaa ggctccagca ccatcaaagc
    23581 tgttttcata gcaccaagaa ctcatactaa gatataagtt tgctgcatac atttctttat
    23641 ttatttgttc gttaagtaat tttacaactt ctttagaaag catttttatc tccttttgaa
    23701 ttttaaacgg tgttttataa tgatatatta tttttctaaa aacaagctaa aactttaaaa
    23761 gattaaaggt tgaaatttgt aaagatttgt agatgagtca agagcataac tctttgtcgc
    23821 aaagcagaat ttatttctaa aatttcaaaa acaaattttt tagtcaaaca cccatttgaa
    23881 aatgggacgg gggctttaga ggtttcaaaa gggcaacgcc ctttgtcgca aagcagaatt
    23941 tatttctgct gcgaagttaa aaatgtttct aaaatgtttc caagtttttt taaacttcca
    24001 ttactttttt aaagttaagg agaaaaaatg aaaaaaattc tatctttgag tgtggcaagt
    24061 tttgcatttt gtggtgtttt aaatgcagca gatttaaaaa ttgcaggttc atcaactgtg
    24121 tatcctttta cttcttttgt agctgaagaa tacgcttcga ttaaaaatgc aaaaactcct
    24181 atagtagaga gtttaggaac aggtggtgga tttaaagtat tttgcgaagg aactactgat
    24241 atttctaatg cttcaagacc tatgaaatta agcgaatttg aaacttgtaa aaaagcagga
    24301 gtaactgata tagtagggat catgataggt tatgatggta tagttttagc tcaaaataag
    24361 accaatacac cattaaatat cactaaaaaa gaacttttct tagcgttagc aaaagaaatt
    24421 ccacaaaatg gaaaacttat accaaatcct tatactaatt ggaatcaaat caataaaaat
    24481 ttacctaatc gtaaaatcag tgtttatggt ccaccatcaa gttcaggaac aagagatact
    24541 atagaagaac ttgtaatgag tgatgtttct aaaaaaattc ctgagtataa aggtgagtat
    24601 aaaactatac gccaagatgg tgcttatatc ccaagtggag aaaatgataa tctaatcgtt
    24661 tcaaaactta ctattgataa agatgctttt ggaatttttg gttatagctt tttggtaagc
    24721 aattcagata aaatcaatgc tgctattatt gatggtgtta caccaagcga agaaagtatt
    24781 gcagatgaaa aatacgaact tgcaagaagc ttgtttattt atattaacgc taagaaaaat
    24841 ccaaaagaag cctttgattt tgcaaaaatt tatatgaatg atgatttggc aaaaagtggt
    24901 ggagaacttg aaaaaatagg acttgttcct ttaagtgatg ataaattaaa aatttcccaa
    24961 aaacatgtag aagatagaaa aattttaacc gatgatcttg taaaagctgg aaaagttttt
    25021 taaggaaaaa atttgctgaa agaaaaaata atcaaatttg tacttttctt atgtgctttt
    25081 gtaagtgtga tagtaagttt tgctatcatg cttacgattt taatcgaagc tttaaaattc
    25141 tttcaaaaag aaagcgttat caccttttta ttttcaagcc aatgggcagc tgatacagct
    25201 tttatgaatg cagatggcac aagcaagcaa ggtgtttttg gtgcattatc gcttttttgg
    25261 ggaacttttt atatctcatt aatcgctatg ctaacagcct tacctttagg ggttatgtgt
    25321 gctatatatt taggtgtttt tgccggtaaa aaatctaaaa attacttaaa acctatttta
    25381 gaaatcatcg cagggattcc tactgttgtt tttggatttt ttgcagctat agttgtagca
    25441 ccttttatag tgtggttttt ttctttattt ggtatacagg caagctttca aagtgcttta
    25501 ggggcgggtt ttatcatggg gatcatgata gtacctatag tggcttcttt atcacaagat
    25561 tgcatagaag cagtgagtga gaaaagaata aatggagctt atgctttagg catgacaaaa
    25621 aaagaagtgg tttttgctgt gattttacct gaggccattc ctggtatagt tgcagcatgt
    25681 cttttagggc tttcaagagc cttaggtgaa accatgatag tagtaatggc agcttctttg
    25741 cgtccaaatt taaccctgaa ttttttagaa gatatgacaa cagtaacagt aaaaatcgta
    25801 gaagctttaa gtggggatca agcttttgat agttctttgg ctttaagtgc tttttcttta
    25861 ggcttagtgc ttttcatcat cactttaatc atcaatatgt ttagtgttta tcttatcaat
    25921 cgctttcaca aaaggaaaaa tttatgaaaa aactttttaa aaaaagacaa aaaacttcaa
    25981 agtattttaa aagactttgt aaaatggggc tttatattaa tttagttttt ctttgtatct
    26041 ttttaggaag cgtggcttat cttggaattg gagcttttaa acaaagttat atttttgtag
    26101 aagccaatag aaattctcct gcttatgatc ttttatctcg tgcagaacaa agaaaaataa
    26161 gaataggaca aattactgaa aaaacttggc ttttagcaaa ttcagaagta gatcaataca
    26221 tgaaacaaaa atacaatcgc ctaaacgaaa agcaaagagt cttagtagat gatcttgttc
    26281 aaaaaggtga gatagaactt aaatttaata gcaatttctt tttaaatggg gattcaaaat
    26341 ctcctgaaaa ttcaggaatt ttatcttcag ttatagggac tttgcttgtg atgcttgttt
    26401 gtatggttgt gagtgttcct atgggggttg cagcggcaat ttatttggaa gaatttgcac
    26461 cacaaaatat ccttacacat tttatagaag tatgtattaa taatcttgca agtattccaa
    26521 gtatcttatt tggactttta gggcttggag tgtttatcaa tctttttgga atgccgcgct
    26581 caagtgcttt agtaggtggg cttactttag caattatgag tttgcctatt atcattgttt
    26641 cgactaaagc agctttaaaa agcgtggata ttaacatgaa aaatgccgct tatgccttag
    26701 gtatgacaaa ggttcaaatg gtaaaaggta tcatgttacc tttagctatg cctatgattt
    26761 taacaggttc tattcttgct ttagcaggcg ctataggaga aactgcacct ttgatgatta
    26821 tcggtatgat agcttttatc cctgatgtag caagttcaat ttttgatcca actagtgttt
    26881 tgcctgctca aatttactca tggtcagcta tgccagagcg tgcattttta gaaagaactg
    26941 cagcaggtat tatcgtgctt ttagggcttt tggtggtgct aaattttagt gcgatattgt
    27001 taagaaaata ttttcaagga aaaataaagt gatagcaaaa ataacaaatt taaatttatt
    27061 ttatggaaaa aaacaagctt tatttgatat taatatgcaa ataaagcaaa ataaaatcac
    27121 tgcactaatc ggtgcttcag gatgtggcaa atccactttt ttgcgttgtt ttaatagaat
    27181 gaacgataaa attgcaaaaa ttgatggttt ggtggaaatt gaaggaaaag atgttaaaaa
    27241 tcaagatgtg gtggttttgc gaaaaaatgt aggcatggtt tttcaacagc ctaatgtttt
    27301 tgtaaaaagt atttatgaaa atatctctta tgcgccaaaa cttcacggta tgattaaaaa
    27361 taaagatgat gaagaagctt tggtagtgga ttgtcttcaa aaagtaggac tttttgaaga
    27421 aataaaagac aagttaaagc aaaatgccct agctctttca ggcggacaac aacaacgcct
    27481 ttgtattgca agagctttgg cgataaagcc taaacttttg cttttagatg agccaacttc
    27541 tgcgttagat cctattagct caggtgttat agaagagctt ttaaaagagc taagccataa
    27601 tctttctatg attatggtaa cacacaatat gcaacaaggc aaacgtgtgg ctgattatac
    27661 cgcgtttttt catcttggtg agcttataga atttggcaaa agtaaagaat tttttgaaaa
    27721 tccaaaacaa gaaaaaacca aagcttactt aagtggtgct tttggttaag atttatttgt
    27781 ttgggaattt gatgatataa ttatcaaaaa tttccaaaca aggtttagca tgctcataaa
    27841 tcaaacttat tctatagatt cttgtgatga tgtagagcta aatattaaaa gagaaagtaa
    27901 attggatttt aggctaacct atgataatag caaagaaata aaagctataa tttgtattat
    27961 tccaggtggt gctgaagata tgaatagtta tatttatatt gatgattatt tggccagaaa
    28021 ttataatgtc ggtattatta atattaacta tcattgcata ggaaatagac cacatttagg
    28081 ctctagtttt tatttagatg atatagataa gctcatttta gatactagtt taaaagctat
    28141 aaatttaaat catgtaaatg tttttggtat aaattcttac gaagaattaa acaatacttt
    28201 tataaacata gatcaagaaa tagaaaaatt aaaattaagt caaaaattaa atcaaaatta
    28261 taaactaaaa acgcatgtaa gctttttgcc atctaaaaat gaataccaaa attttggtat
    28321 aatgcaagct atggatattt taaatgctat tttttatata aaagaaaatt ctccatttaa
    28381 gttaatgggg gggggggaat gaagacaatt ttatttggta attcttatgg tggatattta
    28441 gcaaatttat gtgcaaaaat agctccttgg agcattgatt ttatattaga taattcttct
    28501 tttgttgatt tttttggaaa tattttcagg cttataggct ttggaaaaga aattgatttt
    28561 actaggtatc atggaacata taatgataga ttatttaaaa atatacttat gtatttgagc
    28621 gataaaactt attggtctag taataaattt tcaaaaaatt atttttctaa tgctagaaaa
    28681 ataataagag agccactaaa taaagaacat ttaaaaattc aaagtt
//
LOCUS       DAPWAA010000017        26663 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.017, whole genome shotgun sequence.
ACCESSION   DAPWAA010000017 DAPWAA010000000
VERSION     DAPWAA010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26663
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.017"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..916)
                     /locus_tag="RTF91_000670"
     CDS             complement(<1..916)
                     /locus_tag="RTF91_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkA"
                     /protein_id="HDZ4943583.1"
                     /translation="MNNILIIIDGILAKHFLERLCFEKGLGCFFTVVCQNSEKNSLNI
                     SSEYIDLHYFDPTSIARLENIMTKDFKQAFIYMQDEFETKKSYEALRSLNPNLEIEIM
                     DFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
                     YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKA
                     GQFPMPFGSNVFALIDMKNMSQNVQERVLDTTLKLIQKSNAKRFFIHVINPKLGVMYE
                     KLKKLSEDKEGIFFDYFNTDFKKISMWLQ"
     gene            946..2067
                     /gene="tgt"
                     /locus_tag="RTF91_000671"
     CDS             946..2067
                     /gene="tgt"
                     /locus_tag="RTF91_000671"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDZ4943584.1"
                     /translation="MEFKLKHKDGMARVCEITTAHSTFLTPVFMPVGTVGAIKSLDAN
                     DMKNELDAKIILANTYHMYLRPTSKVVKDFGGLHGFTKFDRSFLTDSGGFQAFSLNKN
                     SKHFNEGIEFKSHIDGSRHLFTPKSVLNTQYDFNSDIMMILDDLVALPATKERVKISV
                     DRTILWAKEAITHHQNMQNKNIGVGQNIFGIIQGGTDYEERKRCALTLNEMPFDGLAI
                     GGLSVGEENTLMYETVQNLNPYLDENRPRYLMGVGTPEDLVENVERGVDMFDCVMPTR
                     NARNGTFFTSFGKFNIKKAEFINDHEAIDSTCLCYTCRNFPKGYLNHLFKAKELTFFR
                     LASLHNLHYYLELAKQMREAILNNSFTQFKRNFYHLRGK"
     gene            2069..2839
                     /locus_tag="RTF91_000672"
     CDS             2069..2839
                     /locus_tag="RTF91_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HDZ4943585.1"
                     /translation="MLKLHENLKKILQTKNLETFYSEIYGQKVFVYAGLNLETWLFSD
                     EKIYKLQDEEFKLSSIEEFSNFIKSILEDFKAQNTHFQNLLEHKEGIILKGRFVKNFY
                     KKSFILRQKINKNLKQINLLNEAFNLLLSEQTQYKKHLKILNLSIIILNKNTKEHLAR
                     VDTLYTLTNAIKNEKMNKSIYLLSVLSSIFLPLNLIVGFFGMNTNNLFFKDSPYGTLY
                     IFSLICCILIIGVIFYHSKKTKEFDLDEGKRLKNKQNK"
     gene            2888..2964
                     /locus_tag="RTF91_000673"
     tRNA            2888..2964
                     /locus_tag="RTF91_000673"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2922..2924,aa:Arg,seq:gcg)
     gene            complement(2968..3435)
                     /locus_tag="RTF91_000674"
     CDS             complement(2968..3435)
                     /locus_tag="RTF91_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943586.1"
                     /translation="MSYIFFVVFCTALVLLLFLSIIAYLITSDGKKTTKKQKTNQTKQ
                     HATEKTKKFDTDLDKMIIAASNIKLTDIELKELAKLYVQTHKLGSKTSKELDEATKKK
                     LEFVSALAANANASAQTVSYLNKELKKISGSYKKEIDAYEHMGLAKRKIKEDK"
     gene            complement(3436..6681)
                     /gene="ccsA"
                     /locus_tag="RTF91_000675"
     CDS             complement(3436..6681)
                     /gene="ccsA"
                     /locus_tag="RTF91_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDZ4943587.1"
                     /translation="MKNIIKSIGDLRVSVVLFLLFALFCALATFIESAYGTPTAWAMV
                     YDTFWFEYIQLLLGINLLCGMFRYKMFGLKKLPLIIFHISFLFILVGSAMTRYAGFEG
                     ILAIREHTQNSLIESSKTSLRISTIKDGERYSAVNDRYIGNLPFANSFKLKLNLGDDQ
                     AVLKYKDLILNAHYTYKENNNSDPLLVLMLSQKGSQGVDVKFEKGEVKNIEGINFAFM
                     NDNVKAPFVKIDQNLILSSSENLHFLSMLDGQNLELKIGEKANAKERRLYEVKDISFV
                     VKTASLHAQEALEGSNRPQDESFLLWFKSAWLEVARTMLISTFGEPQNWKNSLLLYFK
                     DFALSNENKNLELTGFNALKLELSYKNESKEFYVFEYNKPITIELAGQKFFISWALSY
                     EQLPFDIYLRDFVIDRYPGSMSPASYASEITVKNNNENFDYRIFMNNVLDYDGYRFYQ
                     SSYDKDEKGTVLSVNKDPGKIPTYIGYFLLCLGMFMNFLNPHSRFRTLARLINKDTLK
                     HASVIVFILLMTFSFEKTFAQDLNSTLPVVNTDHAKALATLIVQKSVDGRMVPFDTLS
                     REILEKIHQSNNYKGQNSNAVMLSMLVDVDKWQMEPFILMPQNKAVRDAVANVLEIPS
                     AEYISYKDFFDGNNRYKLQKYVENAIRKNPNARGVFDKEIIKLDERANVVNLVFSGEL
                     FKFIPVQNNPNNVWLAPFSAITTLKGDEEHIVLALIRNYFSAVENAFKDDNWTRADEG
                     LRFIKEYQEKIGYKVMPNKTKIEMEIFSNKAEIFVKLAPVYLVAGFLLLILVFSKMVV
                     PNLRISFIFKVVYVLNILAFVVHTIGLGLRAYLSGHAPWSNGYESMVYIAWALSLSGI
                     FFSRKSPIALSLTSILSGVVLMVAHLSEMNPQITNLVPVLNSYWLSIHVSVITASYGF
                     LGLCALLGIFTLFLMCFLKKDGKYNLNILRNITEATRINEMAMILGLCLLTVGNFLGA
                     IWANESWGRYWSWDSKETWALVSILVYAAILHLRMIPKYCNQFVFALWSMFAYWVIIM
                     TYFGVNYFLTGLHSYAAGEAAQIPGYVYWGFTLMVVLALFAKRKRNFIGKL"
     gene            complement(6700..7395)
                     /locus_tag="RTF91_000676"
     CDS             complement(6700..7395)
                     /locus_tag="RTF91_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943588.1"
                     /translation="MLVVKDLHVYYGLIEVVKGIDFKVKTGHIVSLIGSNGAGKTSTL
                     NALLNSVKRTGQVNFLGYDTKRHLTHTLVQKGIALVPEGRRVFINLNVEENLKIGAFN
                     NTENYEHLREQMYKLFPRLASKKHALAGTLSGGEAQMLAISRALMSEPKLLMLDEPSL
                     GLAPKIVGEVFDIIVRLKEEGITILLVEQNAYSALKISDYAYVLENGRIVMENEAKNL
                     IGDDEIRKKYLGL"
     gene            complement(7382..8152)
                     /locus_tag="RTF91_000677"
     CDS             complement(7382..8152)
                     /locus_tag="RTF91_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943589.1"
                     /translation="MILELKQISKSFGSFKAINETSFKINEGEIFALIGPNGAGKTTL
                     FNIITGNYKPSSGSVEFLGEKIDHLKPHKIVHLGIARTFQNIRLFSSMNVLENVLIGF
                     NKQMKYNILEAFLHLGRFGKIEQVFKEKAYAILEELGIAEFAYEKATSLSYGQQRKVE
                     IARAMATQPRLLLLDEPAAGMNSSESDELAELIFKLRKDYKISVLLIEHDMKFVNKLC
                     DRVLVLDYGKTIFEGKLCDAVNHKEVIAAYLGDFDASS"
     gene            complement(8149..9201)
                     /locus_tag="RTF91_000678"
     CDS             complement(8149..9201)
                     /locus_tag="RTF91_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HDZ4943590.1"
                     /translation="MMVKIKASHLIFLIVSIVFIFISPYIFGDYGLNIINQIAIFIIL
                     AVSYNLINGVTGQFSLEPNGFVAIGAYTAALVLLSTDAKNDQFFLDGPSSFILAIHSN
                     SFILALIVGGICSSLLALILSFAVFRVRGDYLAIVTLGFGIIIKIAAINFPSITNGSR
                     GLVDIPQFSTVYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINIFWIK
                     TLAFSTSAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAVIGAI
                     LVIGGSEWLRFLDELNIKIDSLNLDIQSTPGFRMVVFSIVLVLVMLFARKGIMGYYEL
                     SDVIRGIKKRFKRSEK"
     gene            complement(9201..10097)
                     /locus_tag="RTF91_000679"
     CDS             complement(9201..10097)
                     /locus_tag="RTF91_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HDZ4943591.1"
                     /translation="MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDI
                     MMVGAYAALFCMTNLNVPFLGALSLAMIFAACVGMATDRIAYKPLRQAPRISLLITAI
                     GISFFLQNLFNMLFTSTPRTFTPPSYFEKSVNFGGVITTYGSLLVPALTFVILIAVLW
                     ILYKSKYGIAIRALAFDIQTVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVE
                     PTMGTLIGLKAFAAAVLGGIGSVVGAVLGGLIIGFTEVIVVAFLPDLSGFKDAFAFIF
                     LVFILLFKPTGILGINFEKSRF"
     gene            complement(10117..11226)
                     /locus_tag="RTF91_000680"
     CDS             complement(10117..11226)
                     /locus_tag="RTF91_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDZ4943592.1"
                     /translation="MKKSLILASILSLSLSAAEIKIGVVLPLSGATAAYGQSALEGIK
                     LANSMQSTLSNGDKVSLAIIDTKGDKLESLSGANRLVSQDKVIGLIGEMVTANTLQVM
                     RVAEDNKIPLIAPAATGDRLLDKKIYSSRVCFMDSFQGSSLAKYVFSKLNYKTAVIVV
                     DQSADYSLGLAKAFEKQYKSNGGQILRILRVNSGDKDFRAIVAQVKSLNPEFIFLPLY
                     YSEASLFARQAKLAGLNIPMGSADGVADQTFISLAADASEGYIFTDSFDANNPTTKLS
                     KEFISVYEKAKGTKEVPNFSAMGADAYFVMLNAMNACVDDLTSKCVNEKIHQTTNYQG
                     VSGVISIDQTGNATRSVVVKEIKNQKQNYKDIINP"
     gene            complement(11248..12363)
                     /locus_tag="RTF91_000681"
     CDS             complement(11248..12363)
                     /locus_tag="RTF91_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDZ4943593.1"
                     /translation="MKKLTLTLTVLTMVNYLYAKDINIGVVLPLTGTVAAYGQDVFSG
                     IELANKLQPKLLNGDTIKLVTIDTKGDKLETSNGVNRLITTDKVLGIIGEATTPNTIQ
                     AISIAEEKKIPLIAPVASGDKLLDKKKYASRVCFKDSFQGDKFATYVSRDLGLKNAVI
                     IIDQSNVYSLGLARAFENSFKNNGGKIIKKLVVNSGDKDFRAVVSQFKSLNPDFVYMP
                     IYHPEAALIARQARQVGFDKLLVAGDGVNNQAFIDLGGSAVNGVIFTDSFDYNNPSTQ
                     LGKDFVAAYEKVKGTKELPAFSAMGADAYFVMLNAMNVCVDNLTSECINDKIHQTKDF
                     QAVGGVISIDESGNAIRSVVIKEIQNQKQNYKTIINP"
     gene            complement(12395..12829)
                     /locus_tag="RTF91_000682"
     CDS             complement(12395..12829)
                     /locus_tag="RTF91_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDZ4943594.1"
                     /translation="MIIRWLFISSIFVVAVFGINLKSFFTYTFDANKQYDMEKAKTLY
                     FQNKCNTCHGDNAEKSVIGSRILKDMSPEDIKGALIGYTLDSSSSTTASQMAFYARNL
                     SHEDIDNIIAYIKGENFALDLQIKDLLEEEPAQKTKHNIFLK"
     gene            complement(12838..13029)
                     /locus_tag="RTF91_000683"
     CDS             complement(12838..13029)
                     /locus_tag="RTF91_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mini-MOMP protein"
                     /protein_id="HDZ4943595.1"
                     /translation="MKKLFLIGMILNHFVFAAPLDGVFKDIEVSGTVRYRYDIKKEKK
                     YNKKTQKYQNKTQTEITIK"
     gene            complement(13082..13588)
                     /locus_tag="RTF91_000684"
     CDS             complement(13082..13588)
                     /locus_tag="RTF91_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhA family protein"
                     /protein_id="HDZ4943596.1"
                     /translation="MLEKIFESLLVRSRIVTILPVIFGLIGAFVLFFIASYDVLKVIF
                     YTYNYFFDAGSNVDLHEDVVALIIGAVDLYLMALVLFIFSFGVYELFISEIEEFKQTK
                     QSKVLEVHSLDQLKDKLAKVIIMVLVVNFFQRVLQMKFSTPVDMAFLAGSILALCVGL
                     YFLHKGDH"
     gene            complement(13598..14629)
                     /locus_tag="RTF91_000685"
     CDS             complement(13598..14629)
                     /locus_tag="RTF91_000685"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDZ4943597.1"
                     /translation="MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSTG
                     NEVEFKGKIYKVKELTQNIFKENPVDIAFFSAGGSVSEKYAKFAVESGAVVIDNTSHF
                     RMEKDVPLVVPECNPEDIKAWKKTGIIANPNCSTIQMVQVLKPLNDVFGLKRVDVSTY
                     QAASGAGKEGMQELVEAMQSFFTFKLDKFKAQIFPYTLALNLIPQIDVFMDNDYTKEE
                     LKMVNETQKILHKNLEISATCVRVPVLRSHSEAITMHFEKEVDVKKAKEILEKAPSVV
                     VMDDPKNKKYPTPLMTSDTNETYVGRIRADVYDKQILHLWCVADQIRVGAATNAVRIA
                     QKWLELKNK"
     gene            complement(14629..15930)
                     /gene="flgR"
                     /locus_tag="RTF91_000686"
     CDS             complement(14629..15930)
                     /gene="flgR"
                     /locus_tag="RTF91_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system response
                     regulator"
                     /protein_id="HDZ4943598.1"
                     /translation="MNLVIVEDDINMRKSLEIALAEYEEFNIKSYKSATEALKKIDEN
                     TDLIITDINMPGIDGIEFVKACENKYDFIIMTGNATLSRAIEAVRLGVKDFLTKPFDV
                     DTLVEAIKRAKIIREKTADKKIKKNEKKEEDRDFFSTSPNLEKTLNLSQKAAKTDASV
                     MFFGESGVGKEVFSRYIHIHSKRANKPFVAINMAAIPANLIESELFGFEKGAFTDANA
                     TKIGLFEIANEGTLFLDEIGEMPYEIQAKLLRALQEKEITRLGSTKSIKIDVRIISAT
                     NANLDEKIKNGEFRSDLYYRLNTIPINIPPLRERKEEILGIAQKVLEDTCKEYDFKEK
                     QLSQEAKNALLEYDFPGNIRELISVVQRACILSENDEISSEDLFLEARSVKKDVKNLE
                     KELICEVLLSVNYDKDQASQILGMDIKILNEKIQKYKIKDR"
     gene            complement(15987..16436)
                     /gene="flgQ"
                     /locus_tag="RTF91_000687"
     CDS             complement(15987..16436)
                     /gene="flgQ"
                     /locus_tag="RTF91_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FlgQ"
                     /protein_id="HDZ4943599.1"
                     /translation="MERIVCLLIFLCFKLFAQDEFIFWAELSSKNFILFYQNQNLSLA
                     MTQSENTEEQWVCKISYRDQDLKVLPRNSLGMIDDNMPKTIKFNFLNSHKDELSDCFI
                     GARISVKDIINTDLLRAQSETYVKILPLRFTVEFGEQNAIIYYLKKK"
     gene            complement(16412..16927)
                     /gene="flgP"
                     /locus_tag="RTF91_000688"
     CDS             complement(16412..16927)
                     /gene="flgP"
                     /locus_tag="RTF91_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly lipoprotein FlgP"
                     /protein_id="HDZ4943600.1"
                     /translation="MKKIYFMLVIAGIFAGCAPSANSTTKNSSANGTVPSQDVIVQKV
                     DKDDVRNIIREEKMLAPDASETELSFTAVGEGIAPMNTVSTAQALALAKRAAITDAYR
                     QLASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDENFNQGLYRVNLELKI
                     DADKWKELFAY"
     gene            complement(16990..19578)
                     /gene="gyrA"
                     /locus_tag="RTF91_000689"
     CDS             complement(16990..19578)
                     /gene="gyrA"
                     /locus_tag="RTF91_000689"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HDZ4943601.1"
                     /translation="MENIFSKDSDIELVDIENSIKSSYLDYSMSVIIGRALPDARDGL
                     KPVHRRILYAMQNDEAKSRTDFVKSARIVGAVIGRYHPHGDTAVYDALVRMAQDFSMR
                     YSTITGQGNFGSIDGDSAAAMRYTEAKMSKLSHELLKDIDKDTVDFVPNYDGSESEPD
                     VLPSRVPNLLLNGSSGIAVGMATNIPPHSLNELIDGLLYLLDNKDANLEEIMQFIKGP
                     DFPTGGIIYGKKGIIEAYRTGRGRVKVRAKIHIEKKTNKDVIVIDELPYQTNKARLIE
                     QIAELVKEKQIEGISEVRDESNKEGIRVVIELKREVMSEIVLNNLFKSTTMESTFGVI
                     MLAIHNKEPKIFSLLELLNLFLTHRKTVIIRRTIFELQKARARAHILEGLKIALDNID
                     EVIALIKNSSDNNIARDSLVAKFGLSELQANAILDMKLGRLTGLEREKIENELAELMK
                     EIARLEEILKSEILLENLIRDELKEIRNKFDVPRITQIEDDYDDIDIEDLIPNENMVV
                     TITHRGYIKRVPSKQYEKQKRGGKGKLAITTYDDDFIESFFTANTHDTLMFVTDRGQL
                     YWLKVYKIPEGSRTAKGKAVVNLINLQAEEKIMAIIPTTDFDESKSLCFFTKNGIVKR
                     TNLSEYQNIRSVGVRAINLDENDELVTAIIVQRDEDEILLSGSEENLENQEIKNLDDE
                     NLENEESASIKGKMLFAVTKKGMCIKFPLAKVREIGRVSRGVTAIKFKEKNDELVGAI
                     VIENDEQEILSVSAKGIGKRTNAGEYRLQSRGGKGVICMKLTEKTKDLISVVIVDETM
                     DLMALTSSGKMIRVDMQSIRKAGRNTSGVIVVNVENDEVVSIAKCPKEENDEDELSDE
                     NFDLDL"
     gene            complement(19619..20194)
                     /locus_tag="RTF91_000690"
     CDS             complement(19619..20194)
                     /locus_tag="RTF91_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HDZ4943602.1"
                     /translation="MRCINCGAFALLCFCDLCELELSEFSLNIRKLDNDFKVYSFYKY
                     HEIQHLLHSKHYFYGYFVYKMLAKLSFAKFKDFFNPGVDINAIALDDKVEDMLYSHSA
                     ILARHLKTRFVKPVFNVLKAQNHIKYSGKSLEFRQKNKRNYKLLKAIYHPVILVDDIV
                     TTGSSLLEAKKVLEKNKISVLFALVLADAKV"
     gene            complement(20191..20835)
                     /locus_tag="RTF91_000691"
     CDS             complement(20191..20835)
                     /locus_tag="RTF91_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943603.1"
                     /translation="MFKKILILIVPILFLSACATKQDTFAQVNQISKNSQCSSCESPD
                     GFEAKIKGLLYISDIGIQCCANKRTLDTGVALKKVYLHRFYDLKEEQKVLNAKGKKLF
                     VDVNFNAVFYIYLKQELEDRGIVVLDNNDQNSPYVSKIDLEFTSYGATQDVTGLHSKL
                     VGVLQVSDINKNKKFTIRTKQDVQGFYDLKETTFYTHLLIKQMANKAASLISEL"
     gene            complement(20913..22703)
                     /gene="lepA"
                     /locus_tag="RTF91_000692"
     CDS             complement(20913..22703)
                     /gene="lepA"
                     /locus_tag="RTF91_000692"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDZ4943604.1"
                     /translation="MENIRNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMDTM
                     DIEKERGITIKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLVVD
                     ASQGVEAQTIANVYIALENNLEIIPVINKIDLPNADIEKVKHEIEHIIGIDCKDAICV
                     SAKTGVGIKELIETIITKIPAPKTDDQAPTKALIYDSWFDNYLGALALVRIYEGSITK
                     NDEVLVISTDKKHTVQDLFYPHPLNPIKTQSLQSGEVGVVVLGLKTVGDVQVGDTITL
                     VKNKAKEAIGGFEKAKAFVFAGLYPIETDKFEDLRDALDKLKLNDSSITYEPETSLAL
                     GFGFRVGFLGLLHMEVIKERLEREFNLDLIATAPTVTYEIYQTNGELVKIQNPSELPP
                     VNKIDYIKEPYVKATIITPSEFLGNLITLLNRKRGVQVKMDYITPERVLLEYDVPLNE
                     IVMDFYDKLKSLTKGYASFDYEPIEFRVGDLVKLDIKVAGENVDALSIIVPNEKAQIK
                     GRELVSAMKEIVPRQLFEVAIQASIGNKIIARETVKSMGKNVTAKCYGGDITRKRKLL
                     EKQKEGKKRMKAIGKVNLPQEAFLSVLKID"
     gene            complement(23102..25006)
                     /locus_tag="RTF91_000693"
     CDS             complement(23102..25006)
                     /locus_tag="RTF91_000693"
                     /inference="COORDINATES: protein motif:HMM:NF013219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDZ4943605.1"
                     /translation="MKKIIFSCVFSSIVLLCIFLFLEFSFLKKHNQENLFSFVFLNYN
                     LSRFFMCLLCGFLLAFSSLILRIVMQNPLASDTTLGVAPSASFAILIATLFFPSFLNI
                     SKVLMGFAGAFSVLFLIFIFMLKRRLNSTSIILLGLISGMIFGALSSLLMLFYPEESK
                     AFLLFNSGYFTQNGFKDVVEFFCYAGVALVSLYFFIPYFKILNLGDELASSVGQNIFY
                     VKFFALCLSAYFITLVVSFVGVISFLGLFASVFVEFFKIKNIRKEFIICGFLGFFLLF
                     VVDLLLQILQILKGVNLPTGGVLALIGSPLLIFAVFRMLKETFNDDIYISCCFKEKYV
                     IVGLILLVLTLFFLNLYFDFSTLNFKNMPDEILALRLNKLAILLLCGILLALVGFILQ
                     KLSFNPMASPEMLGINSGASLGVLFALYFSLEYIQIFAIIGALLVLCFLFFLSVQFNI
                     NMQKIILIGIAIMFFVDALGKIFLASGDFKAYVFLAYTQAGLINIDENLSLSLLIYTG
                     IFLFILYILYPSLKIFSLGENCALSVGLNITKVRIIFLSLSAFACALSALCIGPFSFV
                     GLLAAHIMRLLGIKKLYNQLLSTALLGICLMFLAYFISKIALFPYEIPLGIVATLLGS
                     ICLFFMIKRY"
     gene            complement(25003..25824)
                     /locus_tag="RTF91_000694"
     CDS             complement(25003..25824)
                     /locus_tag="RTF91_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDZ4943606.1"
                     /translation="MKKIVILFLISLEFQAKELKIIALDWTMAETMMMLNYQPLAVGD
                     KRIYNTWVKEPALPNEVKDVGLRVQPNIEYIINLKPDLIITSSLFNVDNHILKNKVKI
                     IDFYQNKKDVYSSINEGVLQIGMILNKKQEALDFIQNTRFFFETFKKKLHYTKPIAIV
                     QFIDKKHLRIYTKHSLFGVVLEQLGLKNVYNKNINNAWGVDIISFLDLLKFPKETKFI
                     VIKPTPFALDEELKQNPFYQKMNIFQDYNELEPIWSAGSLMSMRRFAKDLIGVIE"
     gene            complement(25826..26590)
                     /locus_tag="RTF91_000695"
     CDS             complement(25826..26590)
                     /locus_tag="RTF91_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4943607.1"
                     /translation="MALIKSCNINFKNQNQYIIYPTNLCFENDKIYALMGHNGSGKST
                     LLKILARQLKPSSGKIYFNNQDMAKFSSKKLAQKLAYLPQHLPNLGYLSVKELVKMGR
                     YSYERLFFQNQDQELIDEVMRLTNTLSLSNREIHTLSGGERTRAFLAMLLAQKSEFLF
                     LDEPLAALDIVYQFELMELISRLNKEFKVGIVLILHDINLAALYCDEIVALKEGRVIF
                     NANKQEFMQESRLKDIFNINSSIIEHPKRKSPIALF"
BASE COUNT         9528 a         4815 c         3168 g         9152 t
ORIGIN      
        1 tttgcaacca catagaaatt tttttaaaat ctgtattaaa ataatcaaaa aatatacctt
       61 ctttatcttc agaaagtttt tttagttttt catacattac tcctaatttg ggattaatca
      121 catgtataaa aaatcttttt gcattacttt tttgaattaa ttttaaagta gtatcaagca
      181 ctctttcttg cacattttga ctcatatttt tcatatcaat caaagcaaaa acattacttc
      241 caaagggcat aggaaattgc cctgctttac ctcttatatt atgaaaaata ctttgcaaaa
      301 caacaggatc tccaacaatt aaaatactat catttggttc taaaacaaaa gacggtttta
      361 caaaataaat cttagaattc ctataaataa gaactatacg ccatcttttt tgttgtattg
      421 aacttatatg cctataagca aaaatagatc ctgctggaat ttttacctcc ataatttctc
      481 caacgccaag tcctatatac tgagctgtta aagcaatgtc tggcaaaaaa tccataaatc
      541 tacgacttaa agtcattcta gcatcagcca aatttgcatg ggtatcattg acgctcaaac
      601 cccaaaaatc cattatttct atttctaaat tgggatttaa agagcgcaaa gcctcataac
      661 tttttttggt ttcaaattca tcttgcatat aaataaaagc ttgcttaaaa tctttagtca
      721 taatattttc aaggcgtgct atactcgtag gatcaaaata atgcaagtca atatactcgc
      781 tagaaatatt taagctattt ttttcgctat tttgacatac tactgtaaaa aagcaaccta
      841 agcctttttc aaaacaaagc ctttctaaga aatgctttgc taaaatacca tctattataa
      901 ttaaaatatt attcattttt aactccgaaa aggaaattat aacaaatgga atttaaatta
      961 aagcataaag atggtatggc aagggtttgt gaaatcacta ctgcacatag cactttttta
     1021 acccctgttt ttatgcccgt tggcacagta ggagctatca aaagtcttga cgctaatgac
     1081 atgaaaaacg aacttgatgc aaaaattatt ttagcaaata cctaccatat gtacttacgt
     1141 ccaacttcta aggtagtgaa agattttgga ggtttgcatg gttttacgaa atttgataga
     1201 agttttttaa cagatagtgg aggttttcaa gccttttctt tgaataaaaa ttctaaacac
     1261 tttaacgaag gtatagaatt taaaagccat atcgatggaa gtcgtcatct ttttactcca
     1321 aaaagcgttt taaataccca atatgatttt aattctgata ttatgatgat tttagatgat
     1381 ttagtagctc tacccgcaac caaagaaagg gttaaaattt ctgttgatcg cactatactt
     1441 tgggcaaaag aagccattac tcatcatcaa aatatgcaaa ataaaaatat aggtgtagga
     1501 caaaacatct ttggcattat ccaaggtgga acggactacg aagaaagaaa acgttgtgct
     1561 ttaactttaa acgaaatgcc atttgatggc ttggccatag gtggacttag tgtaggcgaa
     1621 gaaaatacct tgatgtatga aacagttcaa aacttaaacc cctatctaga tgaaaatcgc
     1681 ccaagatacc taatgggcgt gggaacacct gaggatttgg tagaaaatgt cgaacgcggt
     1741 gtagatatgt ttgattgcgt gatgccaact agaaatgcaa gaaatgggac ctttttcaca
     1801 agctttggaa aatttaatat caaaaaagca gaatttatca acgatcatga agccatagat
     1861 tctacttgtt tgtgttatac ttgtcgcaat tttccaaagg gttatttaaa tcatcttttt
     1921 aaagctaaag aacttacttt ttttcgtttg gcaagcttgc ataatttaca ttattatctt
     1981 gaacttgcaa aacaaatgcg tgaagcaatt ttaaacaatt ctttcacaca atttaaaaga
     2041 aatttttatc acttaagagg taaataaaat gctaaaactg catgaaaatt taaaaaaaat
     2101 cttacaaaca aaaaatttag agacttttta tagtgaaatt tatggacaaa aagtttttgt
     2161 ttatgcaggt ttaaatttag aaacttggct ttttagcgat gaaaaaattt acaaacttca
     2221 agatgaagaa tttaaacttt ctagtataga agaattttca aattttatta aatcaatttt
     2281 agaagatttt aaagcacaaa atactcattt tcaaaaccta ttagagcata aagaaggtat
     2341 tattctaaaa ggtcgttttg ttaaaaattt ctacaaaaaa tcctttattt taagacaaaa
     2401 aatcaacaaa aatctaaaac aaatcaatct tctaaacgag gcttttaatc ttttacttag
     2461 cgaacaaaca caatacaaaa aacatttaaa aattttaaat ttatctatca ttatcttaaa
     2521 taaaaatact aaagaacatc tagcaagagt tgatacactt tatacattaa caaatgcaat
     2581 taaaaatgaa aaaatgaata agagtattta tcttttaagc gtactttctt ctattttcct
     2641 acctttaaat ttgattgtag gtttttttgg aatgaataca aacaatcttt tttttaaaga
     2701 tagtccttat ggaacacttt atattttttc tttgatttgt tgtattttga ttataggcgt
     2761 tatattttat cattctaaaa agactaaaga atttgattta gatgaaggca aaaggctaaa
     2821 aaacaaacaa aataagtgaa attttgctta ttttaagaat atttatatat aattttaact
     2881 tatttttgcg ctcatagctc agctggatag agcatttgat tgcggttcaa aaggccagag
     2941 gttcgaatcc tcttgagcgc accactatta tttatcttct ttaatttttc ttttagccaa
     3001 tcccatatgc tcataagcat caatttcttt tttataagat ccagaaattt tcttaagttc
     3061 tttgtttaag taacttaccg tttgtgcact tgcattagca tttgcagcca aagcagaaac
     3121 aaattctagt ttcttttttg ttgcttcgtc taattcttta gaagtttttg acccaagctt
     3181 atgtgtttgc acataaagct tagcaagctc ttttaattca atatctgtta atttaatatt
     3241 agaagcagca attatcattt tatctaaatc tgtatcaaat tttttagttt tttcagttgc
     3301 atgctgcttt gtttgattgg ttttttgttt tttggttgtt tttttaccat cacttgtaat
     3361 aagataagca attatactta aaaacaataa aagtactaaa gcggtacaaa aaacaacgaa
     3421 aaagatatag ctcatttaaa gcttgcctat aaaatttcgt ttcctttttg caaaaagggc
     3481 taaaaccacc atcaatgtaa atccccaata aacataacca ggaatttgag ccgcctcgcc
     3541 tgcagcataa gaatgaagcc ctgttaaaaa gtaatttact ccaaaataag tcataataat
     3601 aacccaataa gcaaacatac tccataaagc aaatacaaat tgattgcaat attttggaat
     3661 cattctaaga tgcaaaatcg ctgcataaac taaaatgcta accaaagccc aagtttcctt
     3721 agaatcccaa ctccaatacc ttccccagct ttcatttgcc caaattgcac ctaaaaaatt
     3781 tcctacagta agcaaacaaa gtcctaaaat cattgccatt tcattgattc ttgtagcctc
     3841 tgtaatattt cttaaaatat taagattata ttttccatct ttcttgagaa aacacattaa
     3901 gaacaatgta aagataccaa gtaaggcaca aagtcccaaa aatccataac tagcagtaat
     3961 aacagacaca tgaatgctaa gccaataaga attaagtaca ggaacaagat ttgtaatttg
     4021 cggattcatt tcgcttaaat gtgcaaccat taatacaacg ccggataaaa tggaagtcaa
     4081 tgataaagct ataggacttt tcctggaaaa aaatatacct gataaagata atgcccaggc
     4141 tatataaacc atgctttcat aaccattact ccatggagca tgacctgata aataagcgcg
     4201 gagtccaaga cctattgtat gaactacaaa ggctaaaata tttaaaacat atacgacttt
     4261 aaaaataaaa gagattctca aattcggtac aaccatttta gaaaaaacaa gaattaaaag
     4321 taaaaaacct gcaaccaaat atacaggagc aagcttaaca aaaatttcag ccttattgga
     4381 aaaaatttcc atttcgatct tggttttatt aggcataact ttatatccta ttttttcttg
     4441 atattctttg ataaatctca aaccttcatc agctctagtc caattatcat ctttaaaagc
     4501 attttccaca gcactaaaat aattccgtat taaagctaaa acaatatgct cttcatctcc
     4561 tttaagagta gttatagcag aaaaaggtgc aagccaaaca ttatttggat tattttgaac
     4621 aggaataaat ttaaacaatt caccgctaaa aactaaattt acaacattag ctctttcatc
     4681 taattttata atttccttat cgaaaactcc tcttgcattt ggatttttgc gaattgcatt
     4741 ttcaacatat ttttgaagct tatagcgatt gttcccatca aaaaaatctt tataagaaat
     4801 atattcagca ctaggaattt ctaaaacatt tgcaacagca tcacgaactg ctttattttg
     4861 cggcattaaa ataaaaggct ccatttgcca cttatctaca tcaaccagca tagaaagcat
     4921 aacagcatta gaattttgcc ctttatagtt attactttga tgaatttttt ctaaaatttc
     4981 tcttgataat gtatcaaaag gcaccattct tccatctact gatttttgca ctattaaagt
     5041 agcaagggct ttagcatgat cagtatttac aacaggtaaa gtcgaattta aatcttgagc
     5101 aaaagttttt tcaaaactaa aagtcatcag caagataaaa acaatcacac ttgcatgctt
     5161 taaagtatct ttattaatca atcttgctaa ggttctaaat ctagaatgtg gatttaaaaa
     5221 attcataaac attccaagac aaagtaaaaa ataacctata taagttggta ttttacctgg
     5281 atctttattt acagataaaa cagttccttt ttcatcttta tcataagaac tttgataaaa
     5341 tctataacca tcataatcta agacattatt cataaaaatt ctataatcaa aattttcatt
     5401 attattcttt acagtaattt cacttgcata agaagctgga gacatagaac ctggataacg
     5461 atctatcacg aaatctctta agtaaatatc aaaaggcaat tgttcataag aaagtgccca
     5521 agaaataaag aatttttgac cggcaagctc tatcgtaata ggtttattat attcaaaaac
     5581 ataaaattct ttactttcgt ttttataact tagttctaat tttaaagcat taaaaccagt
     5641 taattctaag tttttatttt cattacttaa agcaaagtct ttaaaataca ataataaaga
     5701 attcttccaa ttttgaggct ctccaaaagt agaaatcaac atagttctag ctacttctaa
     5761 ccaagcagat ttaaaccata ataaaaaact ttcgtcttga ggtctattgg aaccttctaa
     5821 agcttcttgt gcatgtaaag aagcagtttt aactacaaaa ctaatatctt taacctcata
     5881 aagtcttctt tctttagcat ttgccttttc tccaatttta agttctaaat tttgcccatc
     5941 tagcatactt aaaaaatgta agttttcgct tgaacttaaa attaaatttt gatcaatttt
     6001 cacaaaagga gctttaacat tatcgttcat aaaagcaaaa ttaattcctt ctatattctt
     6061 aacttcacct ttttcaaatt taacatcaac accctgggat cctttttgag aaagcatcaa
     6121 aaccaataaa ggatcagaat tattgttttc tttataagta taatgggcat tcaagattaa
     6181 atctttatat tttaacacag cttgatcgtc gcctaagtta agctttagtt taaaagaatt
     6241 agcaaaaggt aaatttccta tataacgatc attaacagca ctataacgtt ccccatcttt
     6301 tatcgtagaa atacgcaaag aagttttaga actttctatg agtgaatttt gggtatgctc
     6361 tctaatagct aaaatgcctt caaatccggc atatcttgtc attgcagaac ctactaaaat
     6421 aaataaaaaa gaaatatgaa aaataattaa aggcaatttt ttaagcccaa acattttata
     6481 acgaaacatc ccacacagta aattaatgcc aagtaaaagt tgtatgtatt caaaccaaaa
     6541 agtatcataa accattgccc aagccgtagg agttccataa gcactttcaa taaaagtcgc
     6601 caaagcacaa aaaagtgcaa aaagcaaaaa taatacaact gaaactctta aatctcctat
     6661 gctttttatt atatttttca ttctttttcc ttgtaaattt taaagtccta aatatttctt
     6721 tctaatctca tcatcaccta ttaaattctt agcttcgttt tccattacaa tacgaccatt
     6781 ttccaaaaca taagcataat cacttatttt taatgcggaa taagcatttt gctctactaa
     6841 aagaatagtt ataccctctt cctttaaacg tacaataata tcaaaaactt cccctacaat
     6901 ctttggtgca agccctaagg aaggttcatc tagcattaaa agttttggtt cactcattaa
     6961 agctctcgaa attgcaagca tttgtgcttc tcctccactc aatgttccag ctaaagcatg
     7021 ttttttactt gcaagtcttg gaaaaagctt gtacatttgt tctcttaaat gctcataatt
     7081 ttcagtatta ttaaaagcac ctatttttaa attttcttct acgtttaaat taataaaaac
     7141 acgccttcct tcaggaacta aagctatgcc tttttgaacc aaagtatgag ttaaatgtct
     7201 tttagtatca taacctaaaa aattaacctg acctgttctc ttaaccgaat ttaaaagtgc
     7261 atttaaagtt gaagttttac ctgctccatt tgaacctata agagaaacaa tatgacctgt
     7321 ttttacttta aaatcaatcc ctttaacaac ttcaattaat ccataataaa catgtaaatc
     7381 tttaactact agcatcaaaa tcccctaaat acgcagcaat tacttcttta tgatttacag
     7441 catcgcaaag cttaccctca aaaattgttt ttccgtaatc aagcaccagt acacgatcac
     7501 ataatttatt tacaaatttc atatcatgct ctataagcaa aacgctgatt ttataatctt
     7561 ttcgtaattt aaaaataagt tcagcaagct catcactttc agaactattc attccagcag
     7621 ctggctcatc aagcaacaat aatcttggtt gggtagccat tgctcttgca atctcaactt
     7681 ttctttgttg tccataactc aagctagtag ccttttcata agcaaattct gcaataccaa
     7741 gttcttctaa tattgcatag gccttctctt taaatacttg ttctattttt ccaaaacgtc
     7801 ctaaatgcaa aaaggcttcc aaaatattat atttcatttg cttattaaaa ccaataagaa
     7861 cattttcaag tacattcata ctggaaaaaa gtctaatatt ttgaaatgtt ctagctatcc
     7921 ccaaatgcac aattttatga ggttttaaat gatcaatttt ttctcctaaa aattcaaccg
     7981 aacctgagct aggtttatag tttcctgtta tgatattaaa aagagttgtt ttaccagccc
     8041 cattaggccc aattaaagca aaaatttcac cttcattgat tttaaaagaa gtttcattaa
     8101 tagctttaaa gctaccaaaa ctttttgaaa tttgttttaa ttccaaaatc atttttcact
     8161 ccttttaaaa cgttttttaa tccctctaat cacatcactt aattcataat aacccataat
     8221 accttttctt gcaaaaagca tcactaaaac taatacaata gaaaaaacaa ccattctaaa
     8281 acctggtgtt gattgaatat caagatttaa agaatctatt tttatattta attcgtctaa
     8341 aaatctcaac cattcactcc cgccaataac taatatcgca cctataacag cacctgtagt
     8401 agaaccaagt ccacccaaca caataataat caaaagctga aaagtaagta aaaaatcaaa
     8461 ttgggttgga gatacagtag tcaaaagaca agccaaaagt ccaccaccta caccttctaa
     8521 aaatgctgaa gtgctaaaag ctaaagtttt tatccaaaaa atatttattc ccatagcact
     8581 tgcagcatct tcatcatctc ttatagcctt catagcacga ccatatttag aataaactat
     8641 atttaaaatc aaaataactg ctacaatggc aataccacca gtccaataaa ccgtggaaaa
     8701 ttgtggaatg tctacaagcc ctcttgaacc attagtaata gaagggaaat taatagcagc
     8761 aattttaatg attattccaa aacccaaagt tacaatagct aaataatcgc ctctcacacg
     8821 aaatacagca aaagataaaa tcaaagcaag taaagatgaa caaattccac ctacaattaa
     8881 agctagtata aaagaatttg aatggatagc taaaataaaa gaactaggac catctaaaaa
     8941 aaactgatca ttttttgcat cagtacttaa aagaactaaa gctgctgtat aagctccaat
     9001 tgcaacaaat ccattaggtt ctagtgaaaa ttgtccggtt acaccgttaa tcaagttgta
     9061 actcacagcc aaaataataa aaatagcaat ttgattaata atatttaatc cataatcccc
     9121 aaaaatataa ggagaaataa aaataaaaac aattgaaaca atcaaaaaga ttaaatgtga
     9181 agctttaatt ttgaccatca tcaaaaccta ctcttttcaa aatttatacc taaaattccc
     9241 gtaggcttaa ataacaatat aaataccaaa aaaataaaag caaatgcatc tttaaatcct
     9301 gataaatctg gtaaaaaagc cacaacaata acttcggtaa atcctataat aagtccacct
     9361 aaaactgcac ccactacaga acctatacct cctaaaaccg cagcagcaaa agcttttaaa
     9421 cctatcaaag ttcccatggt aggctcaaca gaataataat tcgcggccca aaaaacacca
     9481 ccaactgctg ctaaagctga acctagtgcg aaaactatag caataatacg atttgcatct
     9541 atccccatta aatttactgt ttgtatatca aatgctaaag cacggatagc tataccgtat
     9601 ttacttttat acaaaatcca taatactgct attagaataa caaaagtaag agcaggaacc
     9661 aacaaagaac cataagttgt tatcactcca ccaaaattaa cacttttttc aaaataactt
     9721 ggtggtgtaa aagttctagg cgttgaagta aaaagcatat taaaaagatt ttgcaaaaaa
     9781 aaactaatgc caattgccgt aattaacaat gaaatcctag gagcttgtct taaaggttta
     9841 taagcgattc tatctgtagc cattccaaca caagcagcaa aaatcattgc caaagataaa
     9901 gcccctaaaa aaggaacatt taaattagtc atgcaaaaaa gagctgcgta agcaccaacc
     9961 atcataatat caccatgagc aaaattgatg agtcttaaca ctccataaac catagtataa
    10021 ccaacagcaa taagagcata catgctacct aaactaagcc cattaacaag ttgttgtaaa
    10081 aataaagtag aatccataat ctttctattg tttcctttaa ggattaatga tatctttgta
    10141 attttgtttt tgatttttga tttctttaac cactacagaa cgagttgcat ttccagtttg
    10201 atcaatgcta ataacacccg aaacaccttg atagtttgta gtttgatgga ttttttcatt
    10261 aacacactta cttgtaagat cgtcaacaca agcattcata gcatttagca taacaaaata
    10321 cgcatcagcg cccatagccg aaaaatttgg aacttctttt gttcctttgg ctttttcata
    10381 aacactgata aactctttac tcaattttgt agttggatta ttggcatcaa aactatctgt
    10441 gaaaatataa ccttcacttg catctgcggc taaactaata aaagtttgat cagcaacccc
    10501 gtctgcagag cccataggaa tatttaaacc tgcaagtttt gcctgtctag caaataaaga
    10561 agcttcgcta tagtaaagtg gcaagaaaat aaattctgga tttaaacttt taacttgagc
    10621 cacaatagct ctaaaatctt tatcccctga attaactctt aaaattctaa gaatttgacc
    10681 accattagac ttatactgtt tttcaaaagc ctttgctaaa cccaaagaat aatcagcact
    10741 ttgatctaca acaataacag cagttttata attaagtttt gaaaaaacat attttgccaa
    10801 agatgaacct tgaaaactat ccataaaaca tacacgagaa gaatatattt ttttatcaag
    10861 caatctatca ccagttgcag caggagcaat caatggaatt ttattatctt ctgctacacg
    10921 cataacttgt aacgtatttg cagtaaccat ttctcctata agacctataa ctttatcttg
    10981 agaaactaaa cgatttgctc cacttaaaga ttctaattta tcacccttgg tatcaattat
    11041 agcaagagaa accttatctc cattgcttaa agtcgattgc attgaatttg caagtttaat
    11101 cccttctaat gcactttgcc catatgctgc agtagctcca ctaagcggta aaacaactcc
    11161 tattttaatt tctgcagcgc ttaaactcaa acttaaaata cttgctaaaa ttaaactttt
    11221 tttcattttc tccctttatt ttaataatta tggatttata attgttttgt aattttgttt
    11281 ttgattttga atttctttaa ttacaacaga acgaatagca ttaccacttt catctatgct
    11341 aattacacca ccaacagctt gaaaatcttt agtttggtga attttatcat taatacattc
    11401 gcttgtaaga ttatcaacac aaacattcat agcatttagc ataacaaaat acgcatcagc
    11461 gcccatagcc gaaaatgctg ggagttcttt tgtcccttta actttctcat aagctgcaac
    11521 aaagtctttt cctagttggg tagatggatt gttataatca aaactatcag taaaaattac
    11581 cccattaaca gcacttcccc caagatcaat aaaggcttga ttattaacac catcccctgc
    11641 tactaaaagc ttatcaaaac cgacttgtct tgcttgtctt gcaattaacg cagcttcagg
    11701 atgataaata ggcatataaa caaaatcggg atttaaactc ttaaattgcg aaacaacagc
    11761 tctaaaatct ttatcccctg aattaacaac aagttttttt ataatttttc cgccattatt
    11821 tttaaaagaa ttttcaaaag ctcttgccaa gcctaaagaa taaacattgc tttgatctat
    11881 aataataaca gcattcttaa gccctaaatc tctagataca taagtagcaa atttatctcc
    11941 ttgaaaacta tctttaaaac aaactctact tgcatatttc ttcttgtcta ataatttatc
    12001 tccagatgct actggggcta ttagaggaat ttttttctct tctgctatgg aaatagcttg
    12061 aatagtattt ggagttgtag cctcaccaat gattccaagc actttgtctg ttgttattaa
    12121 acgattaacc ccatttgaag tttcaagttt atctcctttt gtatctattg tgacaagctt
    12181 aatggtatct ccatttaaaa gttttggttg caacttatta gctagttcaa ttccgctaaa
    12241 aacatcttgt ccataagctg ctacagttcc agttaaaggt aaaactacac ctatattaat
    12301 atccttagca tataagtaat ttaccatagt caaaacagtt aaagtcaaag ttaatttttt
    12361 catagtattc cttattaatt ataattttca tatcttattt tagaaatata ttatgctttg
    12421 ttttttgcgc aggctcctct tcaagaagat cttttatttg taggtcaagt gcaaaatttt
    12481 cacctttaat ataagcaata atattatcta tatcttcatg acttaaattt ctagcataaa
    12541 aagccatttg agaagccgtc gtagagctac tactgtcaag agtataacct atcaaagctc
    12601 ctttaatatc ctcaggagac atatctttta aaattctaga tcctataacg cttttttcag
    12661 cattatctcc atgacaagta ttgcatttat tttgaaaata caaagtcttt gctttttcca
    12721 tatcatattg cttatttgca tcaaaagtat aggtaaaaaa tgattttaaa ttaataccaa
    12781 aaactgcaac aacaaagatt gaactaataa acaaccatcg tataatcatg attttcctta
    12841 ttttattgta atttctgttt gtgttttatt ttgatatttt tgtgtttttt tattatattt
    12901 tttttctttt ttaatatcat aacgataacg aacagtccct gaaacttcta tatctttaaa
    12961 aactccatct aatggagctg caaaaacaaa atgatttaaa atcataccaa ttaaaaacaa
    13021 ttttttcatt cttatttttc aaacacacaa agcaattata ttaaaaaaaa gataatcctt
    13081 gttaatggtc acctttgtgt aaaaaataaa gccccacaca aagagctaaa atagatccag
    13141 caagaaaagc catatccaca ggagtagaaa atttcatttg taaaaccctc tgaaagaaat
    13201 ttaccaccaa aaccatgata ataacttttg caagcttatc ttttaattga tccaagctat
    13261 gcacctctaa aaccttactt tgctttgttt gtttaaattc ttctatttcg ctaataaaaa
    13321 gctcataaac cccaaaagaa aaaataaaca aaaccaaagc cattaaataa aggtcaacag
    13381 cccctataat caaagccacc acatcctcat gcaaatccac attagaacct gcatcaaaaa
    13441 aataattata ggtataaaat ataaccttta aaacatcata acttgcaata aaaaacaata
    13501 caaaagctcc aattaaacca aaaattacgg gtaaaattgt aacaatacgg cttctaacaa
    13561 gcaaagattc aaatattttt tctaacattt tttttcctta tttattcttt aattctaacc
    13621 atttttgagc aatgcgtaca gcatttgttg cagcacctac acgaatttga tctgctacac
    13681 accaaagatg gagtatttgt ttatcataca catcagcacg aattcttcct acataagttt
    13741 cattggtatc acttgtcatc aaaggcgtag ggtatttttt atttttagga tcatccatga
    13801 ctacaacact gggcgctttt tctaaaattt ctttagcttt ttttacatct acctcttttt
    13861 caaaatgcat agtaatagcc tcactatgac ttcttaaaac aggcactcta acacaagtag
    13921 ctgaaatttc taaattttta tgtaaaattt tttgagtttc attaaccatt ttaagttctt
    13981 ctttcgtgta atcattatcc ataaagacat ctatttgcgg aataagattg agtgctaaag
    14041 tataaggaaa aatttgagct ttaaacttat caagtttaaa agtaaaaaaa ctctgcatag
    14101 cttcaactaa ttcttgcatt ccttcttttc ctgcaccact tgcagcctga taagtgctta
    14161 catcaacacg ctttaaaccg aatacatcat ttaagggttt taaaacttgc accatttgta
    14221 tagtagagca atttggatta gcaataatcc ctgttttttt ccaagcttta atatcctcag
    14281 gattacattc aggaactacc aaaggaacat ctttttccat tctaaaatgg ctcgtattat
    14341 caatcacaac agcgccagat tctactgcaa atttagcata tttttcactc acacttccgc
    14401 ctgcactaaa aaaagcaata tcaacaggat tttctttaaa tatattttgc gtaagctctt
    14461 taactttata aatctttcct ttaaattcta cttcatttcc tgtacttttt gcacttgcta
    14521 aaggtaaaat actctctaca ggaaaatcaa gctcatctaa aacatttaaa agctcttctc
    14581 caaccgcccc tgtagcacct acaatggcta ttttttgttt ttttgacact acctatcctt
    14641 tattttatat ttctgaattt tttcatttaa aatttttata tccatgccca aaatttgaga
    14701 agcttgatcc ttatcataat tcacacttaa aagaacttca caaatcaatt ctttttctaa
    14761 atttttcaca tcttttttta cacttctggc ctctaaaaat aaatcttcgc ttgaaatttc
    14821 atcattttca cttaaaatgc aagctctttg cactacagat attagctctc taatatttcc
    14881 tggaaaatca tattcaagta gagcattttt ggcttcttga ctaagttgtt tttctttaaa
    14941 atcatattct ttacaagtat cttctaaaac cttttgagct atacctaaaa tctcctcttt
    15001 acgctctctt aaaggcggga tattgatagg gatggtattt aaacgataat ataaatccga
    15061 acgaaattca ccatttttta ttttttcatc taaatttgca ttagtagcac taataattct
    15121 tacatctatt ttaatgcttt ttgtacttcc aagtcgtgtg atttcttttt cttgtaaggc
    15181 ccttaaaagt ttagcttgaa tttcataagg catttcacca atttcatcta aaaacaaagt
    15241 gccctcattg gctatttcaa aaagccctat tttggttgca ttagcatcag taaaagcacc
    15301 tttttcaaaa ccaaaaagct cactttcaat caaatttgca ggaatagctg ccatgttaat
    15361 agcaacaaaa ggcttattgg cacgtttaga atggatatga atataacggg aaaacacctc
    15421 ttttcccact ccactttctc caaaaaacat tacagaagca tcagttttag ctgctttttg
    15481 acttaaattt aatgtttttt ctaaattagg agaagttgaa aaaaaatctc tatcttcttc
    15541 ttttttttca ttttttttga tctttttatc agctgttttt tctcttatga ttttagcgcg
    15601 ttttatagct tcaaccaagg tatcaacatc aaaaggctta gttagaaaat cttttacccc
    15661 taaacggact gcttctatag cacgacttaa agtagcattt cctgtcataa tgataaaatc
    15721 atatttattt tcacaagctt taacaaattc tataccatca attcctggca tattaatatc
    15781 tgtaataatc aaatccgtat tttcatctat tttttttaaa gcttcagtag cagatttata
    15841 agatttaatg ttaaattctt catattctgc taatgcaatt tctaaggatt tacgcatatt
    15901 aatatcatct tctactatga ctaaattcat cctaagcctt ttaaaaaatt tctgctatag
    15961 tatctaattt gtgcttaatt ttgaatttac ttttttttaa gataataaat tattgcattt
    16021 tgttcaccaa attctacagt aaaacgcaaa ggtaaaattt taacataagt ttcactttga
    16081 gcacgtaaca agtcggtatt tataatatcc ttgacactaa ttctagcccc tataaagcaa
    16141 tcacttaact catctttatg agaatttaaa aaattaaatt taattgtttt tggcatatta
    16201 tcatcaatca tccctaaaga attacgaggt aaaactttta aatcttggtc tctataagaa
    16261 attttacata cccattgttc ttcagtattt tcactttgcg tcattgctaa agataaattt
    16321 tgattttgat aaaagagaat aaaattttta ctagaaagct ctgcccaaaa aataaattca
    16381 tcttgggcaa aaagcttaaa acaaagaaag attaataagc aaacaattct ttccacttgt
    16441 ctgcgtctat tttaagttct aaatttactc tataaagtcc ttggttgaaa ttttcatcaa
    16501 taatgcttgc atttttaatc aaaccattaa cttgagcagt aatagttgaa cttctaagca
    16561 tggcatcttt tacagtatct ttaccattta ctttcacacc ataaagtttg cttgcaagtt
    16621 gtctataagc atcagtaatc gctgctcttt tagctaaagc taaagcttgg gcagtagaaa
    16681 ctgtattcat cggagcaatt ccttcgccaa ctgctgtaaa actaagctct gtttcactag
    16741 catctggagc taacattttt tcttctctaa tgatattacg cacatcatct ttatcaactt
    16801 tttgcacgat aacatcttga gatggaacag tgccatttgc acttgaattt ttagttgtac
    16861 tgtttgcact tggtgcacaa ccagcgaaaa ttcctgctat cactagcata aaataaattt
    16921 ttttcatttt tacaccttca aaatattgta ataataaata aaaagcaata agcgttccaa
    16981 ctttacttac tataaatcca aatcaaagtt ttcatcactt aactcatcct catcattttc
    17041 ctctttagga catttagcaa tgctaaccac ttcatcattt tccacattaa ctacgataac
    17101 accactagta ttacgccctg cttttctaat actttgcata tcaacacgta tcatcttacc
    17161 tgaacttgta agagccatca aatccatagt ttcatctact ataaccacac taataagatc
    17221 tttggttttc tctgtgagct tcatacaaat tacacccttg ccacctctgc tttgtaatct
    17281 atattctcca gcatttgtgc gttttcctat accttttgca cttacactta aaatttcttg
    17341 ctcatcattt tctatgacaa tcgcacctac taattcgtca tttttctctt taaacttaat
    17401 agccgttaca ccacgactta cacgaccaat ttcacgcact ttagcaagtg ggaatttaat
    17461 acacatacct tttttagtta ctgcaaatag cattttaccc tttatgcttg cactttcttc
    17521 attttcaaga ttttcatcat ctaaattttt aatttcttga ttttctaaat tttcttcact
    17581 accgctaagc aaaatttcat cttcatccct ttgaacaata atagcagtta ccagctcatc
    17641 gttctcatca agattgatcg ccctaactcc tacacttcta atattttgat attcacttaa
    17701 gttggtacgt tttactatac catttttagt aaagaaacat aaagacttgc tttcatcgaa
    17761 atctgttgtt gggataatag ccatgatttt ttcttcagct tgtaaattga taagatttac
    17821 caccgctttt cctttggctg ttcttgagcc ttcaggaatt ttataaacct taagccaata
    17881 aagctggcca cgatctgtta caaacataag ggtatcatgt gtatttgccg taaaaaaact
    17941 ttctatgaaa tcatcatcat aggttgtaat agctaatttt cctttcccgc ctcgtttttg
    18001 tttttcatat tgtttactag gcacacgctt aatataacca cgatgtgtaa tagttacaac
    18061 catattttca ttaggaatta aatcttcaat atcaatatca tcgtagtcat cttcaatttg
    18121 agtaatgcgt ggtacatcga atttatttct tatctctttt aattcatcac gaattaaatt
    18181 ttcaagtaaa atttcgcttt ttaaaatttc ttcaagtctt gcaatttctt tcataagttc
    18241 tgcaagctcg ttttcaattt tttctctttc aagtcctgtt aaacgaccta atttcatatc
    18301 taaaatagca ttagcctgaa gttcactaag tccaaatttc gctactaaag aatctcttgc
    18361 gatattatta tcagagctat ttttaatcaa agcaatcact tcgtctatat tatcaagtgc
    18421 aattttaaga ccttctaaaa tatgggctct tgctcttgct ttttgaagtt caaaaatcgt
    18481 tcttctgata ataactgttt ttctatgagt taagaaaaga tttaaaagtt ctaacaagga
    18541 gaaaattttg ggctctttat tgtgaattgc cagcataatc acaccaaaag tactttccat
    18601 ggtggtagat ttaaatagat tatttaaaac aatttcactc ataacttcac gcttaagctc
    18661 tataacaaca cgaattcctt ctttattgct ctcatctctt acttcagata ttccttcaat
    18721 ttgcttttct ttaacaagct cagcaatctg ctctataagt ctagctttat tggtttgata
    18781 aggaagctca tctataacaa taacatcttt atttgtcttt ttttcaatat gaattttagc
    18841 acgcactttc acacgaccgc gccctgtgcg ataagcctct ataatacctt ttttaccata
    18901 aattattcca cctgttggaa aatctggtcc tttaataaac tgcataattt cttctaaatt
    18961 tgcatcttta ttatcgagta aatataaaag cccatctatc aattcattta aactatgagg
    19021 tgggatattt gtcgccatac ctacagctat accgcttgag ccatttaata ataaatttgg
    19081 aaccctagaa ggcaaaacat caggttcact ttctgaacca tcataatttg gaacaaaatc
    19141 aaccgtatct ttatctatat cttttaaaag ttcatgagaa agtttgctca tttttgcttc
    19201 agtataacgc atcgcagcag cactatcacc atctatagat ccaaagttac cttgccctgt
    19261 aatagttgaa tatctcatag aaaaatcttg agccattcta actaaagcat cataaactgc
    19321 tgtatctcca tgtggatgat aacgacctat aacagcaccc actatacgag ctgatttgac
    19381 aaaatctgtt ctactttttg cctcatcatt ttgcatagca tataaaattc ttctatgaac
    19441 aggctttaaa ccatctcttg catcaggtaa agcacggcct ataataacac tcatagaata
    19501 gtctaaataa ctacttttta tagaattttc tatatctaca agttcaatat cagaatcttt
    19561 gctaaaaata ttctccataa aaatccttct attagttcaa agttttgatt ataacatatt
    19621 aaacttttgc atcagctaaa acaagagcaa aaagtacaga aattttattt ttttctaaaa
    19681 cttttttagc ttctaaaagg ctagagccag tagttactat atcatctact aaaattacag
    19741 gatgataaat agcttttaaa agtttataat ttcttttatt tttttggcga aattccaaac
    19801 tctttccaga atatttaata tgattttgcg cttttaaaac attaaaaaca ggctttacaa
    19861 atcttgtttt aagatgtcta gctaaaatgg cagaatgcga ataaagcata tcttcaacct
    19921 tatcatctaa agctatggca ttaatgtcca ctccaggatt aaaaaaatct ttaaatttcg
    19981 caaaacttaa tttcgcaagc attttgtaaa caaaatagcc ataaaaataa tgtttagagt
    20041 gaagcaagtg ttgtatttcg tgatatttat aaaaagaata gactttaaaa tcattgtcaa
    20101 gctttcttat atttaaagaa aattcagaaa gctctaattc gcacaaatca caaaagcaca
    20161 gcagagcaaa agctccgcaa tttatacatc tcaaagttca gaaattaaac tagccgcttt
    20221 atttgccatt tgttttatta gcaaatgagt ataaaaagtt gtttctttta aatcataaaa
    20281 accttgcaca tcttgtttgg tgcgaattgt aaatttctta tttttattta tatcgctaac
    20341 ttgcaaaact cctactagtt ttgaatgcaa ccctgtaaca tcttgagttg ccccataaga
    20401 tgtaaattct aaatcaattt tactcacata aggcgaattt tgatcgttgt tatcaagcac
    20461 aactattccc ctatcttcaa gctcttgttt taaataaatg taaaatactg cattaaaatt
    20521 tacatcaaca aataactttt tcccttttgc atttaaaact ttttgttctt cttttaaatc
    20581 ataaaatcta tgtaaataaa ccttttttaa agcaacaccc gtatctaaag tgcgtttatt
    20641 agcacaacat tgaatcccaa tatcactaat atataaaagt cctttaatct ttgcttcaaa
    20701 accatcaggg ctttcacaag aactacattg agaattttta gaaatttgat taacttgagc
    20761 aaaagtatct tgcttagtcg cgcaagcact caaaaataaa ataggaacta ttaaaattaa
    20821 aattttttta aacatttttt ctccttagaa aattatttta aaattgtatt aaaaatacaa
    20881 gcaaatttca agccaagttt taaaatttct catcaatcta tctttaaaac acttaaaaaa
    20941 gcttcttgag gcaaatttac cttacctatg gctttcattc tttttttacc ttctttttgt
    21001 ttttctaaaa gctttctttt tctggtaata tctccaccat aacattttgc tgtaacattt
    21061 ttacccatgg atttaacagt ttcccttgca atgattttat taccaatact tgcttgaatg
    21121 gccacttcaa aaagctgtct aggaactatt tctttcatag cgctcaccaa ttctcttcct
    21181 ttgatttgtg ctttttcatt tggcacgata atacttagtg catcgacatt ttcacccgcc
    21241 accttaatgt caagtttgac taaatctcct actcgaaatt ctataggctc atagtcaaaa
    21301 ctcgcgtaac cttttgttaa ggattttaat ttatcataaa aatccatcac aatctcattt
    21361 aaaggcacat catattctag caaaacacgc tcgggagtaa tatagtccat tttaacctgg
    21421 actccccttt tacgatttaa aagagtgatt aaattgccta aaaattcact tggagtaatg
    21481 atagtagcct taacataagg ttcttttata taatcgattt tattaacagg aggaagttcg
    21541 ctaggatttt gaattttaac aagctctcca ttagtttgat aaatttcata agttacagtt
    21601 ggtgctgtag caatcaaatc aagattaaat tctctttcaa gtctttcttt gatcacttcc
    21661 atgtgcaaaa gccctaaaaa tcctacccta aaaccaaaac ccaatgccaa agaagtttca
    21721 ggctcataag taatggagct atcattaagc tttagcttat ctaaagcatc tcttaaatct
    21781 tcaaatttat ctgtttctat aggataaagt cctgcaaata caaaagcttt agccttttca
    21841 aaacccccta tagcttcttt agctttattt tttaccaaag tgatagtgtc gcctacttgc
    21901 acatcaccta cggttttaag acctaaaacc actacaccta cttcgccaga ttgtaaagat
    21961 tgagttttaa ttggatttaa aggatgaggg taaaaaagat cttgaactgt atgtttttta
    22021 tctgtgctta ttaccaaaac ttcatcattt ttagtaatgc ttccttcata aattctaact
    22081 aaagccaaag cacctaaata attatcaaac caagaatcat aaattagagc cttagtaggc
    22141 gcttgatcat ctgtttttgg tgcaggaatt ttagtgataa tcgtttctat aagttctttt
    22201 atacccacac ctgttttagc actcacacaa attgcatctt tgcaatctat acctataata
    22261 tgctcgattt catgcttgac tttttcaata tcagcatttg gtaaatcgat tttattaatt
    22321 acaggaataa tttcaagatt attttcaagt gcgatataaa cattagctat agtttgtgct
    22381 tctacgccct gacttgcatc tactactagc aaagcccctt cacagcttgc taaagaacgg
    22441 cttacttcat aggaaaaatc cacatggccg ggagtatcaa taagatttaa aacaaaattt
    22501 tcattattaa atttataatt taaacgcacc gattgtgctt ttatagtgat accacgctct
    22561 ttttctatat ccatagtatc cataacttgt gaactcattt gtctatcgct aatagcacca
    22621 cattcactaa taatcctatc tgcaagagtg gattttccat gatctatatg agctatgata
    22681 gaaaaatttc taatattttc cattgttttc ctaaaaaata tgctttttaa aaattctagc
    22741 aaaaatattt ttcagaaatg attaaattta atctttgata taaagaattt atatgttttt
    22801 actctcaaac tcttttttca agtttttttt atttcaaaac tataatttgg catacctgct
    22861 ttatatcaat atattattgg ctattatcaa aacttctcct aatttattaa gacaaatttt
    22921 ttaagcttcc caatgatcaa aatttgagcg ttttcttggg ttaagttaga tatttaagta
    22981 tttaaagtat tgatttactt ttgcaaagat attgttttac aagatctttt tttgattata
    23041 tttatccaag tagtgatttt atattctttt aaatatacac aataacccga aaaaatttaa
    23101 tctaatacct ttttatcata aaaaataaac aaatacttcc taataaagtt gctacaatac
    23161 ccaagggaat ttcataagga aatagtgcaa ttttagaaat aaaataagcc aaaaacatta
    23221 aacaaattcc aagtaaagct gttgataaaa gttgattata gagcttttta atccctaata
    23281 atctcataat atgagcagct aacaatccca caaaactaaa aggacctata cataaggcac
    23341 ttaaagcaca agcaaaagca cttaaactaa gaaaaatgat tctaactttt gttatgttaa
    23401 gtcctacgct taaagcacaa ttttccccta aagaaaaaat ctttaagcta ggatataaaa
    23461 tatataaaat gaataaaaaa atacccgtat aaatcaataa agataagctt aaattttcat
    23521 ctatattaat aagcccggct tgagtataag ctaaaaaaac ataagcttta aaatccccac
    23581 tggctaaaaa aattttaccc aaagcatcga caaaaaacat tatagctatg cctataagga
    23641 tgattttttg catattgata ttaaattgga cactcaaaaa aaacaaaaaa cacaaaacca
    23701 ataaagcacc tataatagca aaaatttgaa tatattccaa agaaaaatac aaagcaaaca
    23761 acacacccaa acttgctccg gaattgatcc ctagcatctc aggtgatgcc ataggattga
    23821 aactcaattt ttgcaaaata aatccaacca aagccaacaa aataccgcat aaaagcaaaa
    23881 tagcaagctt gtttaatctt aatgctaaaa tttcatctgg catatttttg aaattcaaag
    23941 ttgaaaaatc aaaatataaa ttgagaaaaa agagcgtcaa aacaagcaaa atcaaaccta
    24001 caataacata tttttcttta aaacaacaag atatataaat atcatcatta aaagtttctt
    24061 ttaacattct aaaaacagca aaaataagta atggagaacc aattaatgct aagactccgc
    24121 ctgtaggcaa attaacccct tttaaaattt gtaaaatttg taacaataaa tccactacaa
    24181 acaataaaaa aaagcccaaa aaaccacaaa ttataaattc ttttcttata ttttttattt
    24241 taaaaaattc tacaaaaaca ctcgcaaata agcctaaaaa actaatcact cctacaaaag
    24301 aaactaccaa agtaataaaa taagcactca aacataaggc aaaaaattta acataaaaga
    24361 tattttgtcc gacactactt gcgagttcat cccctaaatt taaaatttta aaataaggaa
    24421 taaaaaaata caaacttact aatgctacgc cagcataaca aaaaaattcc acaacatctt
    24481 taaaaccatt ttgagtgaag taaccactat taaaaagtaa aaaagctttg ctttcttctg
    24541 gataaaaaag cattaataaa gagcttaaag cgccaaaaat cattccactt ataagaccta
    24601 aaaggattat acttgtagag tttaaacgtc ttttaagcat aaaaataaat attaaaaata
    24661 aaactgaaaa agcacctgca aaacccatta atacttttga aatatttaaa aaactaggaa
    24721 aaaataaagt agcgattaaa atagcaaaac tagcacttgg agccacacct aaagttgtat
    24781 cactggctaa aggattttgc atcactatgc gtaaaattaa agaagaaaaa gcaagtaaaa
    24841 aaccacacaa taaacacata aaaaaacgac ttaaattata atttaaaaaa acaaaagaaa
    24901 ataaattttc ttgattgtgt ttttttaaaa aactaaattc taaaaaaaga aaaatacaaa
    24961 gcaaaacgat tgatgaaaac acacatgaaa aaataatttt tttcactcaa ttacccctat
    25021 aagatcctta gcaaaacgtc tcatactcat caatgatcct gcactccaaa taggttctaa
    25081 ttcattataa tcttgaaaaa tattcatttt ctgataaaaa ggattttgtt ttaactcttc
    25141 atcgagggca aaaggggttg gcttaattac tataaatttt gtttcctttg ggaattttaa
    25201 aagatctaaa aaacttataa tatcaactcc ccaagcattg tttatatttt tattataaac
    25261 attttttaaa cctaattgct ctaaaactac accaaaaagg ctgtgtttag tataaattct
    25321 taaatgtttt ttatctataa attgaactat agcaataggt ttggtataat gtaatttctt
    25381 tttaaaagtt tcaaaaaaaa atctcgtatt ttggataaaa tctaaggctt cttgcttttt
    25441 atttaaaatc atcccaatct gcaaaacacc ctcattaata ctagaataca catctttttt
    25501 attttgataa aaatcaataa tttttacttt attttttaaa atatgattgt cgacattaaa
    25561 caaagacgaa gtaataatta agtcgggctt taagttgata atatattcta tattaggttg
    25621 gactctaaga ccaacatctt ttacctcatt tggcaaagca ggttctttaa cccaagtatt
    25681 atatattctt ttatctccaa ctgctaaggg ctgataattt aacatcatca ttgtctcagc
    25741 catagtccaa tctaaagcga taatttttag ttctttagct tgaaactcta atgaaattaa
    25801 aaataaaata acaatttttt tcatattaaa aaagtgcaat aggagatttt cttttaggat
    25861 gctctatgat actagagttt atattaaata tatcttttaa tcttgattct tgcataaatt
    25921 cttgtttgtt tgcgttaaaa ataacccttc cttctttcaa agcaacgatt tcatcgcaat
    25981 ataatgccgc taaattaata tcatgcaaaa ttaatactat gcctacttta aattctttat
    26041 ttaatcttga tattaattcc atcaattcaa actgatacac gatatccaaa gcagccaaag
    26101 gctcatctaa aaataaaaat tcactttttt gagctaagag cattgctaaa aaagctctcg
    26161 ttctttctcc gccagaaaga gtgtgaattt ctctatttga taaactcaag gtatttgtta
    26221 acctcattac ctcatcaatc agttcttgat cttgattttg aaaaaataat ctttcataag
    26281 aatagcgtcc cattttaaca agctctttta cgcttaaata tcctaaatta ggtaaatgct
    26341 gtggcaaata agctagtttt tgagctagtt tttttgaaga aaatttagcc atatcttgat
    26401 tattaaaata aatttttcca gaagatggtt ttaattgtct ggctaaaatt tttaataaag
    26461 tagattttcc tgaaccatta tgacccataa gagcataaat tttatcattt tcaaaacata
    26521 gatttgtagg ataaataata tattgatttt gatttttaaa atttatattg caacttttta
    26581 tgagtgccat tactgatcat atcctcttta aaaacttaaa attacattat aacataaaaa
    26641 ataaataaat aaaaaataat ttt
//
LOCUS       DAPWAA010000018        25666 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.018, whole genome shotgun sequence.
ACCESSION   DAPWAA010000018 DAPWAA010000000
VERSION     DAPWAA010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25666
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.018"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..540)
                     /locus_tag="RTF91_000696"
     CDS             complement(<1..540)
                     /locus_tag="RTF91_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDZ4943608.1"
                     /translation="MKIKESDFEFFKRLKIRSVIDLALLLPKKIENLNPSKNPKENEI
                     CTQKIIIKSVNSRKNQLFGLGFCEEWQVNISFVFFHPRAWHFGVCKVGKELIFSAKLT
                     RFNHTWQFNNPKILNSFEGFSPKYQILGLKDIKITAFIHTYLNYENLKESGIKEKYIH
                     FLLNLHAYDEKSFFMFENLQ"
     gene            complement(530..1750)
                     /locus_tag="RTF91_000697"
     CDS             complement(530..1750)
                     /locus_tag="RTF91_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDZ4943609.1"
                     /translation="MQYLENRGIKIPFIFEENSDFPIVILKLVFRNCARSYDEIAGLA
                     KMFSRILNEGVDDKFFKDLEFRAINLEANSGFESLEINLSCLKENFDFALKSLEKLLL
                     KPRIEEKILQKLKINALGELASKNSDFDYLAKNLLNAQIFECKEFQSPNDGDEKSIEV
                     LSLKDLQNFYKNFIHLSNLVVILGGDLEEKQAKEDLLKFLSKFQIGKKNTPKNYELSK
                     TIKDEILVRQESEQAYIYFATPFFANFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVK
                     RGLAYSAYAMLDMNMSFSRVFGYLQTKNESAKEAKKIVKEVFQNFIKNGITQNELDQA
                     KNFLIGSTPLRYESLSKRLSMTFNEFYQGLNLGHYKEELKLMEDVKLEIINAYIKKHQ
                     ELLNISFASIQNEN"
     gene            complement(1750..2796)
                     /locus_tag="RTF91_000698"
     CDS             complement(1750..2796)
                     /locus_tag="RTF91_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HDZ4943610.1"
                     /translation="MKRLNKKEALDLLHYASLTELGEMAYQRKLELHPEKITTFIVDR
                     NINYTNVCCIDCSFCAFYRHHKEDDAYILSFEEIGKKIEELEAIGGTQILFQGGVHPK
                     LKIEWYEELISWIKEHYPNITVHGFSAVEIAYIAKASKISITEVLQRLQAKGLFSIPG
                     AGAEVLSDRVRDIIAPNKCDTATWLEVHRQAHKIGMKSTATMMFGTVENDEEIIDHFE
                     YLRKLQDETDGFRAFILWSFQSDNTALIKKHPEIMKQSSNKYLRLLALARLYLDNFKN
                     LQSSWVTQGSLIGQLALKFGANDLGSTMMEENVVSAAGASYRMNQDEMIRLIRSLGEN
                     PAKRNTAYEILERF"
     gene            2871..4058
                     /locus_tag="RTF91_000699"
     CDS             2871..4058
                     /locus_tag="RTF91_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ4943611.1"
                     /translation="MNYIDLLKNNKNIRILASVQFIAYFGAWFSQTGVFTLLVELNAP
                     TWAIATSAMLAFLPGILLAPINGVIVEKNKPKKLLLSMISIELVSIFSLIFVTSLSML
                     WLLFILIFIRLCVASIYFQAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGI
                     FIYFLGVKTAFLFDCVLILIGISFLVRLSIPHFHQKTQSRFFTMIKEGFFYVLNNKVI
                     FHLIILHAFIGLTAYETLVTLLAQHKYKEVLSAALVIGFLNAVRACSLTIGPVILSKL
                     VNDKNLFYIYLGQGLGIILWALTQFNFYISFLGLIGAGFFTSTLWAYSYTMIQKNADK
                     EYHGRVIAYTDMIYLSFSAIISMLMGFLFEIGLSLELITGLLGMIFIFAAFYWKWFYG
                     KYL"
     gene            complement(4073..5161)
                     /gene="nusA"
                     /locus_tag="RTF91_000700"
     CDS             complement(4073..5161)
                     /gene="nusA"
                     /locus_tag="RTF91_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDZ4943612.1"
                     /translation="MEKIADIIESIASEKNLNLENVRERVATALINTAKRIYGQEYEF
                     FVDPKNLNLYQKITIVTDNDERLQNKSESFIALSKAKSEAPDVEIGDELTYECSLENL
                     GRTAVNTLHKELEYHIQKLLEQTIFEKYKNKVGQMVFGSVVRVDNEENTYIEIDELRA
                     FLPRKNRIKGEKFKIGDVVKAVIRRVYTDKGIKIELSRTSPKFLECLLEAEVPEIKDG
                     YVNIVGCARIPGERAKIILQANGVNIDPVGATVGVKGVRINAVSKELHNENIDCIEST
                     NESEILISRALAPAIINSVKIEDKKAIVSLNSEQKSKAIGKNGINIRLASMLSGYEIE
                     LNELSSSQVSNTISNEEAMKNLQDLFKI"
     gene            5289..5531
                     /locus_tag="RTF91_000701"
     CDS             5289..5531
                     /locus_tag="RTF91_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943613.1"
                     /translation="MELKLARTLINEKPKNISLEKIEEAIEKEGQKFFYFDKDNTHKQ
                     LIALVNHFEKKGVSIYHRTIKYGLDDNDFMYEVHIL"
     gene            5528..6829
                     /gene="miaB"
                     /locus_tag="RTF91_000702"
     CDS             5528..6829
                     /gene="miaB"
                     /locus_tag="RTF91_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDZ4943614.1"
                     /translation="MSAKKLFIQTLGCAMNVRDSEHMIAELTQKENYALTENIKEADL
                     ILINTCSVREKPVHKLFSEVGSFEKVKKEGAKIGVCGCTASHLGNEIFKRAPYVDFVL
                     GARNISKITQAIKTPKFMGVDIDYDESEFAFADFRNSIYKSYINISIGCDKHCTYCIV
                     PHTRGDEISIPFNIIYKEAQKAVEKGAKEIFLLGQNVNNYGKRFRNEHKKMDFSDLLE
                     ELSAIKDLERIRFTSPHPLHMDDKFLEVFANNPKVCKSMHMPLQSGSSEILKAMKRGY
                     TKEWYLNRALKLRELCPNVNISTDIIVAFPGESEKDFEETMDVLEKVRFEQIFSFKYS
                     KRPLTKAATMPNQIDEETASRRLKILQNRHSEILDEIVKKQENKIFKVLFEELRAGNA
                     IAGRTDNNFLVQVEGSEELLGHFKEVKITNAKRMVLYGEIV"
     gene            6813..7442
                     /locus_tag="RTF91_000703"
     CDS             6813..7442
                     /locus_tag="RTF91_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HDZ4943615.1"
                     /translation="MGKSFKIHFLTFIIFTLQWLIFLSCKKHYKGEKVDHKAGVILFW
                     HGKLALMPFAFRHYRQKNKKAYVMISHHKDGEQIAKIIKLFGLNTVRGSTSRGASNAL
                     RAAFKVLEQNDDIVITPDGPRGPYHSISDGSIILAQKKRLKIRILNYEANRFWEFKSW
                     DKMILPKPFSKITYSLSEPLDILSLDKEKAKKFLMEQFNKISLADQFKE"
     gene            7444..8406
                     /locus_tag="RTF91_000704"
     CDS             7444..8406
                     /locus_tag="RTF91_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clan AA aspartic protease"
                     /protein_id="HDZ4943616.1"
                     /translation="MLFLLKKILPQLFISIILEDKKNIVKASIYRGNKLISSNEKTFN
                     KSENLLEYIKNLSKHFLFYHTALFLGTKEQGLIPSTNIQDCDHFNIGKISLQYILFNN
                     ALVYTATEHVEYYSELFEEYRGLDFLYSPFALLYYNMQKEKQPDDQILLYGFKQGHLL
                     AIIIAKGSTILYGDFKIFEQELGLELELPSEDNQENESGDHDDTESTLDNFNESSDNK
                     FDPPDQENNLETLDNNNDFNLNELNQFSNDMELCRYIITSIEKFYNDDKYAGVFINGV
                     LLYSESDINISAIDFLENETFLEIKTKQINTLDLMIELMRKEFK"
     gene            8403..8930
                     /locus_tag="RTF91_000705"
     CDS             8403..8930
                     /locus_tag="RTF91_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943617.1"
                     /translation="MTYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIA
                     LINSSINNEKQQVIVLQNQTKQNEILYEILFDQSQIAKNFNTQNQIIKESLRNLFDII
                     VKTDNITLESVEQDEYSLKLIGITPTKEMFTLLLETPLKSIFDQSYTTYYRLDNGWYR
                     FVSISKQTPGVTDER"
     gene            8920..9438
                     /locus_tag="RTF91_000706"
     CDS             8920..9438
                     /locus_tag="RTF91_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943618.1"
                     /translation="MKDKSLEEVGLLKLIVCALSFISVCTALILFLLLPTLKNYKQAN
                     LRENSQLAILKATKSKFDFSENKITTLRNENNKSLEQFEQNFNIGNFNTFLQKYFQNV
                     KIQEIKPEKQEKYLKNRLVIKAIMNNPGRLYDLIDALKNYNNLIKLDYPLNLKAEEQG
                     ISINLTLKVYSS"
     gene            complement(9670..9768)
                     /locus_tag="RTF91_000707"
     CDS             complement(9670..9768)
                     /locus_tag="RTF91_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943619.1"
                     /translation="MTIHAGIHSSAAHIFKQNKRLLNLEDLRDDIV"
     gene            complement(9950..10711)
                     /locus_tag="RTF91_000708"
     CDS             complement(9950..10711)
                     /locus_tag="RTF91_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDZ4943620.1"
                     /translation="MSLQQIDQIVSILNKQSKPYDWVIQEFAKVEELKNFDLDLETFE
                     LLGLGLTLNKDNIFTLKTRTTKIKDEIFSIVDIESTGGVSKGEILEIGAVKIQNSKEI
                     GRFQSFIKVKEIPENITELTGITYEMVENAPILAKVLSDFRLFLKDSIFVAHNVRFDY
                     SFISKALNECGFGILLNRRICTIEFAQCCIESPKYKLEVLKELLSIENTHHRALDDAL
                     AAAEIFKYCLGKLPYHVKTTEELINFTKTARIKQK"
     gene            complement(10708..11355)
                     /gene="rpe"
                     /locus_tag="RTF91_000709"
     CDS             complement(10708..11355)
                     /gene="rpe"
                     /locus_tag="RTF91_000709"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDZ4943621.1"
                     /translation="MYVAPSLLSANFLRLEEEIKAIEAAGADLLHIDVMDGHFVPNLT
                     FGPCVVEKISTISKIPLDVHFMVKDVSKFVDLFIPLKPKFISFHVESEVHPIRLCEYI
                     RNQGIHPAIVLNPHTPINSIKHMIEFIDMVLLMSVNPGFGGQKFLPLVYEKIKELREM
                     IDKKNAKVFIEVDGGVNGLNASDLELAGADILVAGSYVFSSSDYKTAISSLKLEF"
     gene            11490..11684
                     /locus_tag="RTF91_000710"
     CDS             11490..11684
                     /locus_tag="RTF91_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDZ4943622.1"
                     /translation="MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLEDGT
                     TKKMRIAASTLRTLKKQNSK"
     gene            11858..12073
                     /locus_tag="RTF91_000711"
     CDS             11858..12073
                     /locus_tag="RTF91_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDZ4943623.1"
                     /translation="MLHEYRELMSELKGKDAHFDKLFDRHNELDDMIKDAEEGRTSLS
                     NMEISTLKKEKLHVKDELNQYLTNYKK"
     gene            12082..13179
                     /locus_tag="RTF91_000712"
     CDS             12082..13179
                     /locus_tag="RTF91_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CZB domain-containing protein"
                     /protein_id="HDZ4943624.1"
                     /translation="MFGSKINHSDLQKLEEENKNLTHKIEKFQSENLELKSKISSLEQ
                     AALESKLKTDLLNVLLSGVLKNIAIVQSDMLENVNKAEIISNYSKTSLAEMDELKHIT
                     NSINASLGDITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRKLAEKTQKATTEVEMNINLLKQNANEMYTQSEQVEKISIDSN
                     AHIMSFSEKFTHLVNESHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFSKSGKQ
                     LADHTSCRLGKWLASIGKERFGQNKSFLKINEPHEKVHENMNNAITIANTEDISKNTT
                     QHSIINRCEIAENASLDLFNVFKEMLDESNH"
     gene            complement(13209..13811)
                     /locus_tag="RTF91_000713"
     CDS             complement(13209..13811)
                     /locus_tag="RTF91_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDZ4943625.1"
                     /translation="MAFKNLKELSFEKSNYIKPKRFTYESNGKLCTWDFIESKDSVSV
                     LLYHKELESFIFVRQFRIPLWYHQMHDKDYVKDENMGYTIELCSGIVDKNLSLKEIAK
                     EECIEELGYAPKNLEKIGDFYTGFGSGVSKQSFYFAEVDEKDKISSGGGVDDEEIEAV
                     YVKVQDFEKKCKNMIRTPLLDFAYMWFLKEKWEKLNNYLG"
     gene            complement(13896..15929)
                     /locus_tag="RTF91_000714"
     CDS             complement(13896..15929)
                     /locus_tag="RTF91_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDZ4943626.1"
                     /translation="MWFLFFFGILLKAEEKYQLNDVVVSASGFEQDLVDAPASISIIT
                     KEELEKKPIKDIGEAIGDIPGVDVTLNKTGTYDFSIRGFGSSYTLVLIDGKRQSVANG
                     FYDNGFSGSESGYLPPLSMIERIEVIRGPASTLYGSDAVGGVINIITKKNPDKTEASV
                     EFNTLLQQHSNHYGNAGGFNAYIATPLIEDTLSISARLKYYDKAASDLKWPTPVWRNN
                     SQLPENYQIATHSPGFFTSLGFGSRLNWTIDDKNNIYFDIERYINEISVNSTSSRAIK
                     SERQLFKDNIVLNHDGNYDFGSTNSYLQYGSTKDKELHSQIWVGEGKVVLPWNLGQYG
                     NLVNTFGARIDYEMLKNDQASAGSQIRGKNLDQTTVALYGENEYFITDDFIFTIGLRY
                     IYSDLFDSEFTPRVYLVYHLNENVAFKGGIAKGYKTPAVKQLTNGYYNYSNGNAYFGN
                     PSLKPEESTNYELGVDFRMFDFAHYSITGFITDFTNQISSEDLTGIQNGIDCSNSTIC
                     TRPINLGKTQTKGIEFAFNTKTYNGFSLNSSYTFMDNRYKGGQKNWFGGDRIENLPRH
                     IAMLKLNYDRGKFSSYIKTRARLDTIAKAKGGGSGVLPWQKYKPFYIVDLGINYKVDK
                     QSSLSFSVQNLFDKNFFDPKVTRWVNNNPGGYANRYQDYTEGRSFWLSYKYDF"
     gene            complement(16099..17037)
                     /locus_tag="RTF91_000715"
     CDS             complement(16099..17037)
                     /locus_tag="RTF91_000715"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HDZ4943627.1"
                     /translation="MASYLDFERNIQQIDEDIINAQIKGDTEAVSILKKNLEKEISKT
                     YKNLSDFQRLQLARHPDRPYALDYIELILNDAHEIHGDRAFRDDPAIVCFMGYLGERK
                     IIVIGEQKGRGTKDKIARNFGMPHPEGYRKALRVARLAEKFQIPILFLIDTPGAYPGV
                     GAEERGQSEAIARNLYELSDLKIPTIAIVIGEGGSGGALAIGVADKLAMMKNSVFSVI
                     SPEGCAAILWNDPAKIEAATKAMKVTADDLKSQGLIDDVVEEPINGAHRNKEAAAIAI
                     ADYVKKSLSELENIDVRELSANRMQKILKLGAYQEA"
     gene            complement(17039..18253)
                     /locus_tag="RTF91_000716"
     CDS             complement(17039..18253)
                     /locus_tag="RTF91_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HDZ4943628.1"
                     /translation="MKRVVVTGIGMINALGLDKESSFKAICNGESGVNKITLFDTTDF
                     PVQIAAEVKNFDPLEVVDGKEVKKIDRFIQLGIKAAREAMQDARLSEELDKEEFGIVS
                     AAGIGGLPNIEKNSIICSERGPRKISPFFIPSALVNMLGGLISIEHGLKGPNISCVTA
                     CAAGTHAVAEAYKSIVLGNAKKMLVIGAEAAICPVGIGGFASMKALSTRNEDPQHASR
                     PFDKERDGFVMGEGAGALVFEEYEEAKKRGATIYAELIGFGESADAHHITSPTLDGPL
                     RAMKKALNMAGNPKVDYINAHGTSTPVNDRNETAAIKELFGKNIPLVSSTKGQTGHCL
                     GAAGAIEAVISVMALRDGVAPPTINQLVKDEECDLDYVPNISRKADLKVVMSNSFGFG
                     GTNGCVVFKKVD"
     gene            complement(18280..18513)
                     /gene="acpP"
                     /locus_tag="RTF91_000717"
     CDS             complement(18280..18513)
                     /gene="acpP"
                     /locus_tag="RTF91_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDZ4943629.1"
                     /translation="MATFDDVKAVVVEQLSIDADAVKMESKIIEDLGADSLDVVELIM
                     ALEEKFEVEIPDSDAEKLIKIEDVVNYIDNLKK"
     gene            18626..19291
                     /gene="tenA"
                     /locus_tag="RTF91_000718"
     CDS             18626..19291
                     /gene="tenA"
                     /locus_tag="RTF91_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HDZ4943630.1"
                     /translation="MLFSNLIKDNQKIWNAYLHHDFVKKLENKSLKKENFLFYLKQDY
                     IYLLNYAKCYARLALNSNTAKELRFAMKFQNYIVEGEMELHRAILSLGINTDELNTKD
                     ESLVNIAYSRYMLSVGENGDFLDMLVALSACAIGYAKIGAKIINRLKNDNLKDHPYKE
                     WILTYGSENFQNEAKEFEDFVNSYTSSVNAQKFQRLSEIFYTVTRLEVAFWEHALKME
                     LNL"
     gene            complement(19437..19571)
                     /locus_tag="RTF91_000719"
                     /pseudo
     CDS             complement(19437..19571)
                     /locus_tag="RTF91_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343875.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
     gene            complement(19568..20620)
                     /locus_tag="RTF91_000720"
                     /pseudo
     CDS             complement(19568..20620)
                     /locus_tag="RTF91_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343874.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(20679..21089)
                     /locus_tag="RTF91_000721"
     CDS             complement(20679..21089)
                     /locus_tag="RTF91_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDZ4943631.1"
                     /translation="MMDLKEIAQFLDENAPAFLATLGTCGNPRVRPIQSPLLVGDKIY
                     FCTANTKGLFKHIKNYNGIEFCSCAKDGTFLRLRANAIFESNLEVKKMMFEKYPYLVN
                     LYENPQNPKFEVFYLDHLSARMQFMNGEFKLFKA"
     gene            complement(21096..21839)
                     /gene="fabG"
                     /locus_tag="RTF91_000722"
     CDS             complement(21096..21839)
                     /gene="fabG"
                     /locus_tag="RTF91_000722"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDZ4943632.1"
                     /translation="MKFSGKNVLITGASKGIGASIAKTLASFGLKVWINYRSKPELAD
                     ALKDEIIASGGNAAVIKFDASKEDEFENGVKIIVESDGELSYLVNNAGVTNDKLALRM
                     KLEDFSGVVDTNLSSAFLGCREALKVMSKKRFGAIVNIASIVGEMGNAGQVNYSASKG
                     GMIAMTKSFAKEGASRNLRFNCVTPGFIKSDMTEVLSDEIKQNYQDNIPLKRFAEPEE
                     VANCVAFLLSDYASYVTGDVLKINGGLYM"
     gene            complement(21911..23389)
                     /locus_tag="RTF91_000723"
     CDS             complement(21911..23389)
                     /locus_tag="RTF91_000723"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HDZ4943633.1"
                     /translation="MKQKCVLIITDGIGYNKSSKFNAFKVAKKPNYENFFKKVPNSLL
                     KTSGLAVGLPEGQMGNSEVGHMCIGSGRIIYQNLVRINKAIENKELEKNENLQKLLAK
                     CERVHIIGLYSDGGVHSMDTHFKAMLEICAKNGNEVFAHAITDGRDVSPTSGLNFIKD
                     LKGFCENLGVHFATLCGRFYAMDRDKRWDRVKEYYECLLGKVNKVSNLLEHMQKSYNE
                     KITDEFIKAAQSENYKGIREEDGIIFINFRNDRMKQLVEVLSSKNFKEFEREKVFENL
                     LTMSVYDDKFQVPVLFEKEKIVNTLAEVISKAGLSQLHTAETEKYAHVTFFFNGGKEE
                     LLQNETRVLIPSPKVKTYDEKPQMSAFEVCDAVKKGIEKGEDFIVVNFANGDMVGHTG
                     DFNAAIKAVEAVDTCLGEVVECARKHDYAFIITSDHGNCEAMQDEKGNLLTNHTTFDV
                     FVFVEVKGISKIKDNMGLSNIAASVLKILDLEIPKEMNEALF"
     gene            23469..24530
                     /locus_tag="RTF91_000724"
     CDS             23469..24530
                     /locus_tag="RTF91_000724"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDZ4943634.1"
                     /translation="MYYLSDLSHYAFFTYISVRAGFAFFIALCLSLFLMPKFIAWAKA
                     KNASQPIYEYAPETHKTKCHTPTMGGLIFISSAVIASLFCIKFDNIFAISALFCLIFF
                     CLIGLVDDLGKVLKKDNHSGLSPRMKLLTQIIAGLICILPLYFSTEFSTEFFIPFYKH
                     PLFDMEIFAIAFWILVLISSSNAVNLTDGLDGLATVPSIFSLSTLGIFLYLSGNLNYS
                     EYLLLPKIQGLGEVVIICAALIGALMGFLWYNCYPAQVFMGDSGSLALGGFIGFLAII
                     SKNEILLLLIGFVFVLETVSVILQVGSFKIFNKRVFKMAPIHHHFEKVGWVENKIIVR
                     FWMIAFLSNLLALASIKLR"
     gene            24530..>25666
                     /locus_tag="RTF91_000725"
     CDS             24530..>25666
                     /locus_tag="RTF91_000725"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDZ4943635.1"
                     /translation="MKISLFGYGKTTRAIAENLADKFGPFNIYDDHFKETNQDTLGNL
                     LLNPSSFNSSLSQLEIPSPGFPPNHKLIQKAKNLQSEYDFFYDIMPKSIWISGTNGKT
                     TTTQMTTHLLSHIGAVMGGNVGTPLAKLDPYAKLWILETSSFTLHYTHKAKPEIYALL
                     PISPDHLSWHGSFDNYVQDKLSVLERMNECDVAILPKIYANTPTKAYIISYENEKDLA
                     NQLKIDIEKISFKSPFLLDVILALAVEKILLDTLNYDLLNSFVMEKNKLEEIKDSQNR
                     LWVNDTKATNESAVMAALNRYKDKKIHLIIGGDDKGVDLSNLFDFMKGFDIELYTIGV
                     STEKMLDYAKKANLKAYKCKILSKAVNEISNRLKANEVALLSPAC"
BASE COUNT         8872 a         4441 c         3334 g         9019 t
ORIGIN      
        1 ttgcaaattt tcaaacataa aaaaactttt ttcatcataa gcatgcaaat ttaaaagaaa
       61 atggatgtac ttttctttta tgccgctttc ttttaaattt tcataattaa gatatgtgtg
      121 tataaaagca gtaattttta tatcttttaa gcctaaaatt tgatattttg gactaaaacc
      181 ctcaaaggaa tttaaaattt taggattatt aaattgccaa gtatgattaa aacgcgtgag
      241 tttagcacta aaaataagct cttttcctac tttacacacc ccaaaatgcc aagctctagg
      301 gtgaaaaaac acaaaagaaa tatttacttg ccattcttca caaaaaccca aaccaaaaag
      361 ttgatttttt cttgaattta cactttttat aatgattttt tgggtgcaaa tttcattttc
      421 tttaggattt ttacttggat ttaaattttc aattttttta ggtaaaagaa gtgctaaatc
      481 aataacactt ctaatcttta atcttttaaa aaattcaaaa tcactttctt taattttcat
      541 tttgtatgct tgcaaaactt atgtttaaaa gctcttgatg ttttttgata taagcattaa
      601 ttatttcaag tttaacatct tccataagtt ttagctcttc tttataatgt cccaaattta
      661 aaccttgata aaattcatta aaagtcatag acaaacgctt acttaagctt tcataacgca
      721 aaggcgttga tcctatgaga aaatttttag cttgatcgag ttcattttgc gtgataccat
      781 tttttataaa attttgaaaa acttctttta cgattttttt agcctcttta gcactttcat
      841 ttttagtttg taaatagcca aaaactctag aaaaagacat gttcatatcc aacatagcat
      901 aagcagaata cgcaaggcct cttttaacac gaatttcttc catgatcctt gaaccaaaac
      961 ctccttgtcc taaaacaaat aaggcaattt ttgcaagata taaatcctta tctttaaaat
     1021 tagcaaaaaa aggcgtagca aaataaatat aagcttgctc gctttcttga cgcactaaaa
     1081 tttcatcttt gattgtttta cttaactcat aattttttgg agtatttttt ttgcctattt
     1141 gaaattttga aagaaatttc aaaagatctt ctttggcttg tttttcttct aaatctccac
     1201 ctaaaatcac aactaaatta ctaagatgaa taaaattttt ataaaaattt tgtaagtctt
     1261 ttaaagataa gacttctata cttttttcat ctccatcatt tggactttga aattctttgc
     1321 attcaaaaat ttgagcattg agtaaatttt ttgccaaata atcaaaatca ctatttttac
     1381 tcgcaagttc acccaaagca ttgattttca atttttgtaa aattttttct tctattcttg
     1441 gttttaaaag caatttttcc aaactcttta aagcaaaatc aaaattttcc ttcaagcaag
     1501 aaagattgat ttctaaactt tcaaaaccac tatttgcctc taaatttatc gctctaaatt
     1561 ctagatcttt aaaaaattta tcatccacac cttcattcaa aatgcgtgaa aacatcttag
     1621 ctaaacccgc tatttcatca taacttctag cacaatttct aaaaacaagc ttcaaaataa
     1681 caataggaaa atcagaattt tcttcaaaaa taaaagggat tttaataccc ctgttttcta
     1741 aatactgcat taaaaccttt ctaaaatttc ataagcggta ttgcgtttag caggattttc
     1801 tcctaaactt ctaataagcc ttatcatctc atcttgattc attctataac ttgcccctgc
     1861 agcactaact acattttctt ccatcatagt tgaacctaaa tcattggctc caaattttaa
     1921 agcaagctgt cctatgagtg agccttgagt gacccaagaa ctttgtaaat ttttaaaatt
     1981 atccaaataa agtcttgcta aagctaaaag tcttaaatac ttgttagagc tttgcttcat
     2041 aatctctgga tgttttttaa ttaaagctgt attatcgctt tgaaaactcc ataaaataaa
     2101 agccctaaaa ccgtccgttt catcttgcaa ttttcttaaa tactcaaaat gatcgatgat
     2161 ttcctcatca ttttcaaccg ttccaaacat catagtagct gtgcttttca tgccaatttt
     2221 atgtgcttga cgatgcactt ctaaccaagt agctgtatcg catttatttg gcgctataat
     2281 gtcacgtact ctatcgctta acacctcagc acctgctcct ggtatagaaa acaaaccctt
     2341 agcttgtagt ctttgcaata cttcagtgat tgaaatttta gatgcttttg caatataagc
     2401 gatttcaacc gcagaaaaac catgcacagt gatatttgga taatgttctt ttatccaaga
     2461 aataagctct tcataccatt ctatttttaa ttttggatgc accccacctt gaaaaagaat
     2521 ttgtgtgcct ccgatagctt ctagctcttc tatctttttg cctatctctt caaagcttaa
     2581 aatataagca tcatcttctt tatgatgacg ataaaaagca caaaaagaac aatcaataca
     2641 acaaacatta gtataattaa tatttctatc cacaataaaa gtagtaattt tttcaggatg
     2701 aagctctaat tttctttgat aagccatttc tccaagttca gttaaacttg cataatgtaa
     2761 taaatccaaa gcttcttttt tgtttagtct tttcaaaatt tttccttgtt tttttacata
     2821 attaaaataa ttatagcatt taaaatataa attatgctat agtttcactc atgaattata
     2881 ttgatctatt aaaaaataat aaaaatatca ggatattagc ttcagttcaa tttatagcat
     2941 attttggagc atggttttct caaacaggcg tttttactct tttagtcgaa cttaatgctc
     3001 ctacttgggc aatagctaca agtgctatgc ttgctttttt acctggaatt ttacttgcac
     3061 ctattaacgg tgttattgta gaaaaaaata agcccaaaaa acttttactc agtatgatta
     3121 gcatagaact ggtctctatt tttagtctta tatttgtcac aagtcttagt atgctatggc
     3181 ttttgtttat tttgatcttc ataagacttt gtgtcgcttc gatttatttt caagctgaaa
     3241 tgagtttatt agctaaaatt ttaaccccgc aagagctcaa actcgctaat gaaatgcaca
     3301 gtgttatttg ggcaatttct tatacggcag gtatggcaag tgcgggaatt tttatttatt
     3361 ttctgggtgt taaaactgcc tttttatttg actgcgtact catactcata ggcatttctt
     3421 ttttagtaag attaagtatt ccccattttc atcaaaaaac acaaagtcgt ttttttacta
     3481 tgataaaaga aggttttttc tatgttttaa acaataaagt gatttttcat cttatcatac
     3541 ttcacgcttt tataggttta accgcttatg aaaccttagt tacacttttg gcacaacaca
     3601 aatataaaga agttttatca gctgctttgg taataggatt tttaaatgca gtgcgtgctt
     3661 gttctttgac cataggacct gtgattttaa gtaaattggt taatgataaa aatttatttt
     3721 atatatatct tggacaaggt ttaggtatta tactttgggc tttaactcaa tttaattttt
     3781 atatttcttt tttaggttta atcggagcag gtttttttac ctctactctt tgggcttata
     3841 gctatactat gatacaaaaa aatgcagaca aagaatatca cggcagagta attgcttata
     3901 cagatatgat ttatcttagt tttagtgcta ttatttcaat gctgatgggc tttttatttg
     3961 aaataggctt aagcttggaa ctgattacgg gcttattagg tatgattttt atctttgcag
     4021 cattttattg gaaatggttt tatggaaaat atttgtaaaa aatcataata ttttaaattt
     4081 taaacaaatc ttgaagattt ttcatcgctt cttcattact tatagtattg cttacctgcg
     4141 atgaacttaa ctcattaagc tctatttcat aaccacttaa cattgatgca agacgaatat
     4201 taatgccgtt ttttcctatg gctttgcttt tttgttcgct atttaagctt acaatagctt
     4261 tcttatcttc aattttcaca gaatttataa tagcaggagc taaggcacga gaaattaaaa
     4321 tttcactctc atttgtagat tctatacaat caatattttc attatgaagc tctttactta
     4381 ctgcattaat ccttacacct ttaacaccta ctgtagcacc cacaggatcg atatttaccc
     4441 cattagcctg aagaatgatt tttgctcttt cgcctggaat tctagcacat cctacaatat
     4501 taacataacc gtctttgatt tcaggaactt cagcttcaag caaacattct aaaaatttag
     4561 gacttgtgcg actaagctcg attttaatac ccttatccgt ataaacacgg cgtattacag
     4621 cttttaccac atctcctatt ttaaattttt cacctttaat acgatttttt cttggtaaga
     4681 aagctcttaa ttcatcaatt tctatataag tattttcttc attatcaacc cttaccacac
     4741 taccaaaaac catttgccct actttatttt tatatttttc aaaaatagtt tgttctaata
     4801 atttttgtat atgatattca agctctttat gtaaggtatt taccgcagtt cttcctaaat
     4861 tttctaaaga acattcataa gttaattcat ctcctatttc aacatcagga gcttctgatt
     4921 ttgccttact taaagcaata aaactctcac ttttattttg caatctctcg tcattatctg
     4981 ttactatggt gattttttga taaagattca aatttttagg atctacgaaa aattcatatt
     5041 cttgcccgta aattcttttt gcagtattaa ttaaagcggt agctaccctt tctcttacat
     5101 tctctaaatt taaatttttt tcactagcaa tagattcgat aatatctgct attttttcca
     5161 tattttaaaa ccttttttcg tgggaaattt aaataatgat aggtaaaaat tatatcctta
     5221 ataagtttaa ttaaaagtaa aatttgctaa aattatagat taaaatgaaa attcttaagg
     5281 atttagctat ggaattaaaa ttggcaagaa ctttgattaa tgaaaaacct aaaaatatta
     5341 gcctagaaaa aatcgaagag gctatagaaa aagaaggtca aaaatttttt tattttgata
     5401 aagataatac acataaacaa ctcattgccc ttgtaaatca ttttgagaaa aaaggggtga
     5461 gtatttatca taggacaata aaatatggac ttgatgataa tgattttatg tatgaggtgc
     5521 atattctttg agtgctaaaa aactttttat tcaaacttta ggttgtgcaa tgaatgtcag
     5581 agattctgaa catatgatcg cagaactaac acaaaaagaa aattacgcat taacagaaaa
     5641 tatcaaagaa gcagatctta tccttattaa tacctgctca gtgcgtgaaa aacctgtaca
     5701 taaacttttt tcagaagtgg gtagttttga aaaagttaaa aaagaaggtg ctaaaatagg
     5761 agtttgtgga tgcactgcat cgcatttagg aaatgaaatt tttaaacgcg ctccttatgt
     5821 ggattttgtt ttaggagcaa gaaacatttc taaaatcact caagccataa aaactcctaa
     5881 atttatgggt gttgatatag actacgatga aagcgaattt gcttttgcgg attttagaaa
     5941 tagcatttat aaatcttata ttaacatttc cataggctgt gataaacact gcacttattg
     6001 catagttccg cacacaagag gggatgaaat ttctatacct tttaatatca tctacaaaga
     6061 agctcaaaaa gccgttgaaa aaggcgctaa agaaattttt ctattagggc aaaatgttaa
     6121 taactatggt aaaagattta gaaatgagca taaaaaaatg gacttttcag atcttttaga
     6181 agaactcagc gctataaaag acttagaacg cattcgtttc acaagcccac atcctttaca
     6241 tatggatgat aaatttttag aagtttttgc taataatcca aaggtttgca aatccatgca
     6301 tatgcctttg caaagtggtt caagtgaaat tttaaaagct atgaaacgcg gttatactaa
     6361 agaatggtat ttaaacaggg ctttaaaact tagagaactt tgcccaaatg ttaacatttc
     6421 aactgatata attgtggctt ttccgggtga aagtgaaaaa gattttgaag aaactatgga
     6481 tgttttagaa aaagtgcgtt ttgaacaaat tttttctttt aaatactcca aacgcccttt
     6541 aacaaaagct gcaaccatgc ctaatcaaat tgatgaagaa acagcttcaa gaagacttaa
     6601 aattttacaa aatcgacata gtgaaatttt agatgagatt gtaaagaaac aagaaaacaa
     6661 aatctttaaa gttttattcg aagaattaag agcaggcaat gctattgctg gaagaacaga
     6721 taataatttt ttagttcaag tcgaaggtag cgaagaactt ttagggcatt ttaaagaagt
     6781 aaaaatcact aatgcaaagc gtatggtttt atatggggaa atcgtttaaa attcattttt
     6841 taacattcat aattttcacc ttacaatggc ttattttttt aagctgcaaa aaacactata
     6901 aaggtgaaaa agttgatcat aaagctggag tgatactttt ttggcatgga aaattggcac
     6961 ttatgccttt tgcatttaga cattatagac aaaaaaataa aaaagcctat gttatgattt
     7021 ctcatcataa agatggagag caaattgcta aaatcatcaa actttttggt ctaaacactg
     7081 taagagggag tacctcaaga ggtgctagca atgcacttag agctgcattt aaagttttag
     7141 agcaaaatga cgatatagtt atcacgcctg atggcccacg cggaccttat catagtattt
     7201 cggatggttc tatcatttta gctcaaaaaa aaaggttaaa gataagaatt ttaaactatg
     7261 aagcaaatcg tttttgggaa tttaaaagtt gggataagat gatcttgcca aaacctttta
     7321 gcaagattac ttatagtcta agcgaacctt tggatatttt atctttagat aaagaaaaag
     7381 ccaaaaaatt tctaatggag caatttaata aaattagctt agctgatcaa tttaaggaat
     7441 gaaatgttat ttttacttaa aaaaatactt ccacaacttt ttattagtat cattttagaa
     7501 gataagaaaa atattgtaaa agcttctatt tatagaggaa ataaactaat cagtagcaat
     7561 gaaaaaactt ttaataaaag cgaaaattta ttagaatata taaaaaattt aagcaaacat
     7621 ttcttatttt accataccgc tttgttttta ggtactaaag aacaaggatt aatacctagc
     7681 acaaacattc aagattgcga tcactttaac ataggaaaaa ttagcctgca atatatttta
     7741 tttaacaatg ctcttgttta tacagctact gaacacgtag aatattatag cgagcttttt
     7801 gaagaatata gaggcttaga ttttttatat tctccttttg ctcttcttta ttataatatg
     7861 caaaaagaaa aacaacctga tgatcaaatt ctactttatg gatttaaaca aggacatctc
     7921 ttggcaatta tcattgctaa aggtagtact attttatatg gggattttaa aatatttgag
     7981 caagaactag gcttagaact tgaacttcca tcagaagata atcaagaaaa cgaaagcggc
     8041 gatcatgatg acactgaatc taccttggac aactttaatg aatcttcaga caacaaattt
     8101 gatccacctg atcaagaaaa taaccttgaa actttggata ataacaatga ttttaacctt
     8161 aatgaactaa atcaatttag caatgatatg gaactttgtc gttatattat taccagtatt
     8221 gagaaatttt ataatgatga taaatatgct ggagtattta tcaatggtgt tttattatat
     8281 agcgaatcag atatcaatat aagtgctatt gattttttag aaaacgagac ttttttagaa
     8341 ataaaaacta aacaaatcaa tactttagat ctcatgatag agttaatgcg gaaggagttt
     8401 aaatgactta tagcttcata cagccaagaa aaaaacctat tttcacactc tttgataaaa
     8461 tttggctagg actttttggt tttagtatat tatttatttt attagtatat tttacatata
     8521 caataaaaat tgcgttaatc aatagctcta tcaataatga aaaacaacaa gttatagtac
     8581 ttcagaatca aaccaaacaa aatgaaatac tttatgaaat tttatttgat cagagtcaaa
     8641 tagcaaaaaa ttttaacact caaaatcaaa ttattaaaga aagcttaaga aatctatttg
     8701 atattattgt aaaaactgat aatatcaccc ttgaaagtgt tgaacaagac gaatactcct
     8761 taaaacttat tgggattact cctacaaaag aaatgttcac cctactttta gaaacacctt
     8821 taaaaagtat ctttgatcaa agctatacaa cttattatcg tttagacaat ggatggtatc
     8881 gttttgttag tattagcaaa caaactccag gagttacaga tgaaagataa aagtctagaa
     8941 gaagttggtt tattaaagct tattgtttgt gcattaagtt ttataagtgt ttgtacagcc
     9001 ttaattttat ttttactttt gccaacatta aaaaattaca aacaagcaaa tcttagagaa
     9061 aattcacaac ttgctatctt aaaagctact aaatcaaaat ttgactttag cgagaataaa
     9121 ataacaactc taagaaatga aaacaacaaa agtttagagc aatttgaaca aaattttaat
     9181 ataggcaatt ttaatacttt tttacaaaaa tattttcaaa atgtaaaaat tcaagagatt
     9241 aaacccgaaa aacaagaaaa atatctaaaa aaccgcttag ttattaaagc aataatgaat
     9301 aatcctggaa gactttatga tcttatcgat gctctaaaaa attataataa cttaatcaaa
     9361 ctcgattatc ctcttaatct taaagcggaa gagcaaggta tctctataaa tcttactctc
     9421 aaagtttatt caagctaaac taacatcttc gcgtttttag aatttaattc atagtgttca
     9481 ttgcacacat tttccataca tagaacataa attcaaatga cactcattaa acatttttta
     9541 gccttttctg cacaatggca agttaaacat tttctcctaa ttatctctta tctagccttg
     9601 ctcatctcat catcttttgc tctttctttt ggaaagcttg actatcttct acatgagcca
     9661 cgattttagt caaactatat catctctaag atcttctaaa tttagaagtc ttttgttttg
     9721 tttaaaaata tgtgccgcac tagaatgaat acctgcatga attgtcataa agtcaactcc
     9781 acttttagta ttttggataa ataaaggatg gtataaattt ttaaagcatt gaaatttata
     9841 aatttcccaa cactcgtatt atctagatcc gcttaagttt aagcttttag cttactttca
     9901 gcctattaca caagtccctc atttatgttt taatatactc tttaaatatt tatttttgct
     9961 ttatacgcgc agtctttgta aaatttataa gctcttctgt agtttttaca tgataaggaa
    10021 gttttccaag gcaatattta aaaatttcag cagccgctaa agcatcatct aaggctctat
    10081 gatgcgtatt ttctatactt aaaagttctt ttaaaacctc aagtttatat tttggactct
    10141 ctatgcaaca ttgtgcaaat tctatagtac aaatacgacg attaagtaaa atgccaaaac
    10201 cacactcatt taaagccttg gaaataaaac tataatcaaa acgcacatta tgtgctacaa
    10261 aaatactgtc ttttaaaaaa agtctaaaat cacttaaaac ttttgccaaa attggagcgt
    10321 tttctaccat ctcataagta atacctgtaa gttcagttat attttctgga atttctttta
    10381 ctttaataaa actctgaaag cgtccaattt ctttagaatt ttgaattttc accgctccaa
    10441 tttccaaaat ttcacctttg cttaccccac cggtgctttc tatatctact atagaaaaaa
    10501 tttcatcttt gatttttgtt gtgcgtgttt taagggtaaa aatattatct ttatttaaag
    10561 ttaaacctaa acccaaaagc tcaaaagttt ccaaatctaa atcaaaattt tttaattctt
    10621 caactttagc aaactcttgt attacccaat cataaggctt actttgttta tttaatatag
    10681 aaacaatctg atcaatttgt tgtaaactca aaattcaagc tttaaagatg aaattgcggt
    10741 tttataatca ctcgaagaaa aaacataact cccggctact aaaatatcag ctccagcaag
    10801 ctctaaatca ctcgcattta aaccattcac tccgccatca acttctataa aaactttagc
    10861 atttttttta tcaatcattt cgcgtaattc tttaattttt tcatatacta aaggtaaaaa
    10921 tttttgtcct ccaaagcctg gattaacact cattaaaagc accatatcta taaattctat
    10981 catgtgtttt atagaattta taggagtgtg tggatttaaa acaatagcag gatgaatgcc
    11041 ttgatttctt atatactcac aaagccttat aggatgaact tcactttcca catgaaaaga
    11101 aataaatttt ggttttaaag gaataaacaa atccacaaat ttacttacat ctttaaccat
    11161 aaaatgtaca tctaatggta ttttactaat ggttgaaatt ttttcaacta cacaaggtcc
    11221 aaaagtcaaa tttggaacaa aatgtccatc cattacatca atatgtaaaa gatctgctcc
    11281 tgcagcttca atagctttaa tttcttcttc taatcttaaa aaatttgcgg ataataaact
    11341 tggggctaca tacatcatca aaccttaaac tataaatgta ataaatagca ttttatcgac
    11401 ttatatatta aaagaactat aaattatgga atattttaag cttaattttg ataaaatctt
    11461 tatttaaaaa ttttcataag gacaagaaaa tggcaagagt atgtcaaatc acaggcaagg
    11521 gtccaatggt gggtaataat gtcagccatg ctaacaataa aacaaaaaga cgctttttac
    11581 ctaatcttag aacagttcgt gtgactttag aagatggcac tacaaaaaaa atgagaattg
    11641 cagcttctac tctaagaact ctcaaaaaac aaaattctaa ataattctga ggatttattc
    11701 ctcaatttta atgttttcaa tctaaaaatc aacttaataa atcactcata taacacattt
    11761 aaaattatta ttaactttat tattttttaa gccaaaaata tctttgaata gtgtaaaatt
    11821 aacgagttta aatttcacta aataccaagg agagtttatg ctacatgaat atagagaatt
    11881 aatgtcggaa ctaaaaggta aagatgccca ttttgataag ttatttgatc gtcataatga
    11941 acttgatgac atgattaaag atgcagaaga aggtagaact tctcttagca acatggaaat
    12001 ttcaacctta aaaaaagaaa aactccatgt aaaagacgaa cttaaccaat atttaacaaa
    12061 ttataaaaaa taaggcaaac aatgtttgga agtaaaataa accattctga tcttcaaaaa
    12121 ctcgaagaag aaaataaaaa tcttacacat aaaattgaaa aatttcagtc agaaaattta
    12181 gaattaaaaa gtaaaatttc atcattagag caagcagctt tagaatctaa actcaaaaca
    12241 gatcttttaa atgttttatt atcaggggtt ttgaaaaata ttgctatcgt tcaaagtgat
    12301 atgctagaaa atgtaaataa agcagaaatt atctctaatt attctaaaac ttctcttgcc
    12361 gaaatggacg aattaaaaca cattactaat tctatcaatg cctccctagg agatatcact
    12421 gaatcagcca ataaaacaag agatgttgca ggaacactac atagaagcgt agatgaaatc
    12481 accaatgtaa ttaatctaat taaagatgtt tccgatcaaa ccaatctttt agctcttaat
    12541 gccgctatag aagctgctcg cgcaggagaa catggacgtg gatttgcagt tgttgctgat
    12601 gaagtaagaa aactagctga aaaaacacaa aaagcaacta cagaagtgga aatgaatatc
    12661 aatcttctaa aacaaaatgc aaacgaaatg tatactcaaa gcgagcaagt tgaaaaaatt
    12721 tctatagatt ctaatgctca tattatgagt ttttctgaaa aatttaccca cttggtaaat
    12781 gaaagccatt ctactaactc aaacgcagtt ggtatcgctt cagaagcttt tgtatcttta
    12841 gcaaaactag atcatatagc ctttaaattg aatggctata aagaaatttt ttccaaatca
    12901 ggaaaacaac tagccgatca cacctcttgt cgcttaggaa aatggcttgc cagcataggc
    12961 aaagaaagat ttggacaaaa taaaagcttc ttgaaaatca acgaaccgca tgaaaaagtc
    13021 catgaaaata tgaacaatgc tataacaata gcaaatacag aagacattag caaaaatacc
    13081 acccaacata gcataattaa cagatgcgag attgctgaaa atgcatcact tgatcttttc
    13141 aatgtattta aagaaatgct tgatgagtca aatcattaaa atcctaggtt aaaccttatc
    13201 aaaaaagttt aacctaaata attatttaat ttttcccact tttcctttaa aaaccacata
    13261 taagcaaaat caagcaaagg tgttcttatc atatttttac attttttttc aaaatcttgc
    13321 accttaacat aaacagcctc aatctcttca tcatcaactc caccaccaga agaaatttta
    13381 tctttttcat caacttctgc aaaataaaag ctttgtttac ttacacctga accaaatcct
    13441 gtataaaaat ctcctatttt ttctaaattt ttaggagcgt accccagttc ttctatacat
    13501 tcttctttcg ctatttcttt taaggataaa tttttatcta caatccctga acaaagctct
    13561 atggtataac ccatattttc atcttttaca taatctttat catgcatttg atgataccaa
    13621 agcggtatgc gaaattggcg tacaaaaata aaactttcta attctttatg atataaaagc
    13681 actgaaacac tatctttaga ttctataaaa tcccaagtac aaagcttgcc attactttca
    13741 taagtaaatc ttttaggttt aatataattt gatttttcaa aagaaagttc ttttaaattt
    13801 ttaaatgcca taataaaacc tttttttgca attttttaca ttgtacttta tttttgcttt
    13861 ttttaaaata taagggcaat aaagccctaa taaaattaga agtcgtattt atagcttaac
    13921 caaaaacttc ttccttctgt atagtcttga taacgattgg catatcctcc tggattattg
    13981 ttaacccatc tagtaacttt tggatcaaag aaatttttat caaaaagatt ttgcactgaa
    14041 aaacttaaac tggattgttt atcgacttta taatttatcc ctaaatcaac tatataaaaa
    14101 ggtttgtatt tctgccacgg caaaaccccg ctgccacctc ctttcgcttt agcaatagta
    14161 tcaagccttg ctcgcgtttt tatataagaa ctaaatttac ctcgatcgta atttaatttt
    14221 aacatcgcta tatgtcttgg taaattttct atcctatcac caccaaacca atttttttga
    14281 ccacctttat agcgattatc cataaaagta taacttgaat ttaaactaaa accattataa
    14341 gttttggtat taaatgcaaa ttctatacct ttagtctgtg tttttccaag attgatagga
    14401 cgcgtacaaa tagtgctatt gctacaatca ataccatttt gtatacctgt taaatcttca
    14461 ctactgattt gatttgtaaa atcagtaata aatcctgtga tagaataatg agcaaaatca
    14521 aacatcctaa aatcaacacc taattcataa tttgtactct cttctggttt taagctagga
    14581 tttccaaaat aagcattacc attgctatag ttataatatc cattcgttag ttgtttaaca
    14641 gcaggggttt tataaccttt tgcaatccct cctttaaaag ctacattctc atttaaatga
    14701 taaaccaaat aaactctagg cgtaaattca gagtcaaaca aatcgctata aatataacgc
    14761 aaacctatag taaaaataaa atcatcggtg ataaaatact cattttctcc ataaagcgca
    14821 actgtggttt gatcaagatt tttacctctt atttgactac ctgcgcttgc ttgatcattt
    14881 ttaagcatct cataatcaat ccttgcacca aaagtattta ctaaattacc atattgaccc
    14941 aaattccaag gtaaaacaac cttaccttct cctacccaaa tttgactatg taattcttta
    15001 tccttagtgc tgccatattg taaatatgag ttagtcgaac caaaatcata gttaccatca
    15061 tggtttaaaa caatattatc cttaaaaagt tgtctttcgc ttttaatagc cctactactt
    15121 gtagaattta ctgaaatttc attaatatat cgctctatat caaaatatat attattttta
    15181 tcatctattg tccaattaag cctggaacca aaacctaggc tagtaaaaaa acctggacta
    15241 tgagtagcaa tttgataatt ttcaggtagt tggctattat tacgccaaac tggagtaggc
    15301 cattttaaat cagaagctgc tttatcatag tactttaatc ttgcagaaat ggataatgta
    15361 tcttcaatta aaggagttgc tatataagca ttaaatcctc ctgcattgcc atagtgatta
    15421 gaatgttgtt gcaaaagagt attaaattct acacttgcct cagttttatc aggatttttt
    15481 ttagtgataa tatttataac accacctaca gcatcactac cataaagcgt agaagctgga
    15541 ccgcgtatta cctcgatacg ctctatcata gacaaaggcg gtagatatcc tgattcacta
    15601 ccactaaaac cgttatcata aaatccattt gcaacacttt ggcgttttcc atcgattaag
    15661 actaaagtat aagaactacc aaaacctcgt atgctaaaat cataagtacc tgttttattt
    15721 agagtcacat ctacgcctgg aatatctcct atagcctctc ctatatcctt aatcggcttt
    15781 ttttcaagct cctcttttgt gataatagaa atactagcag gtgcatcaac taaatcttgt
    15841 tcaaaaccac tagcgcttac tacaacgtca ttaagttgat atttttcttc tgcttttaat
    15901 aaaattccaa aaaaaaataa aaaccacagt aaactttttt taaattttgc attttttaat
    15961 ctcctcaaaa ctaactcctt taaaaaataa ttattttgat atttaaaatc atttttaaag
    16021 tataaaaaag aattactttt aattagctta tttttgataa taattaaata aaattattta
    16081 aaaaaatgaa gtaagagctt aagcctcttg ataggcccca agctttaaaa tcttttgcat
    16141 acgatttgcg gaaagctcgc gaacatcaat attttcaagt tcacttaaag atttttttac
    16201 ataatcagca atagctattg ctgcggcttc tttgttacga tgtgcaccat ttataggttc
    16261 ttctaccaca tcatcaatta aaccttgaga ttttaagtca tcagctgtta ctttcatagc
    16321 cttggttgca gcttcgattt ttgcaggatc attccaaagt attgcagcac aaccttcagg
    16381 ggaaattact gaaaaaacag aatttttcat cattgcaagc ttatctgcaa cccctatggc
    16441 caatgctcca ccactaccac cttctccgat aactatagca atggtcggta ttttcaaatc
    16501 acttaattca tataaatttc tcgcaatagc ttcactttgt cctctttctt cagcacctac
    16561 accaggataa gcacctgggg tatctatcaa aaataaaata ggaatttgaa acttctctgc
    16621 aagtcttgct actcttaaag ccttacgata tccttcagga tgcggcatac cgaaatttct
    16681 agcgatttta tcttttgtcc cgcgtccttt ttgctcacca attacgatta tttttctttc
    16741 tcctaaataa cccataaaac aaacaatagc aggatcatct ctaaaagcac gatctccatg
    16801 tatctcatgg gcatcattta aaataagttc aatgtaatca agtgcataag gacgatcagg
    16861 atgacgcgct aattgcaaac gttgaaaatc acttaaattt ttataagttt tagaaatttc
    16921 tttttcaaga tttttcttta aaattgatac agcctcagta tctcctttaa tctgagcatt
    16981 gataatatcc tcatcaattt gctgaatatt tctttcaaaa tctaaataag aagccatatc
    17041 aatctacttt tttaaataca acacagccat ttgtgccacc gaaaccaaaa gaattactca
    17101 ttactacttt taaatctgct tttcttgata tatttggaac atagtcaaga tcacactcct
    17161 catcttttac aagctgatta attgtaggtg gagctactcc atctcttaaa gccataacac
    17221 taataacagc ctcgatcgca cctgcagcac ctaaacaatg acctgtttgt ccttttgtag
    17281 aacttacaag tgggatattt ttaccaaaaa gttctttaat cgccgctgtt tcatttctat
    17341 cattaacagg agttgaagtt ccatgtgcat taatataatc tacttttggg tttcctgcca
    17401 tatttaaggc ttttttcata gcccttaaag gtccatctaa agttggtgaa gtaatatgat
    17461 gcgcatctgc actttctcca aatccaatta attcagcata aattgtagcg ccgcgttttt
    17521 tagcctcttc atactcctca aaaactaaag ctccagcacc ttctcccata acaaaaccat
    17581 ctctttcctt gtcgaatggt cttgaagcat gctgtggatc ttcatttctt gttgataaag
    17641 ctttcattga ggcaaaaccg cctataccta cgggacagat cgcagcttct gcacctatga
    17701 ctaacatctt cttagcattt cccaaaacta tacttttata agcttctgct acagcatgag
    17761 ttcctgctgc acaagctgta acgcaagaaa tatttggtcc tttaagtcca tgctctatag
    17821 aaatcaagcc tcctagcata tttacaagtg ccgaaggtat gaaaaaaggg gaaattttgc
    17881 gcggacctcg ctcagaacaa ataatggagt ttttttctat attaggtaaa cctccaatac
    17941 cggcagccga aacaatacca aattcttctt tatctaactc ttcactaagt ctagcatctt
    18001 gcatcgcttc tcttgctgct ttaattccaa gctgtataaa acggtcaatt ttttttactt
    18061 ccttaccatc aacaacctct aatggatcaa aattcttaac ttcagctgca atttgaacag
    18121 gaaaatctgt ggtatcaaaa agagtaattt tatttacccc gctttctcca ttgcaaatcg
    18181 ctttaaatga actttcttta tctaaaccaa gggcattgat catgccaata cctgtaacta
    18241 caactctttt caagaacaag ctccttgcaa gaaaaaaaat tattttttta gattatcaat
    18301 ataatttaca acatcttcaa ttttaattaa tttttcagca tcactatctg gaatttctac
    18361 ttcaaatttt tcttctaaag ccataataag ctctacaaca tctaaagaat cagcacccaa
    18421 atcttcaata atttttgatt ccattttaac tgcatccgca tcaatactta attgctctac
    18481 tactactgct tttacatcat caaatgttgc catttgttct ccttcaaaaa attaaaacaa
    18541 agcatatttt actataaaaa agcttaaaat atttatagtt tttcattata cttgaaaata
    18601 aaaatcaaaa cataaaggaa aaaccatgct tttctctaat ttaatcaaag acaaccaaaa
    18661 aatttggaat gcttatttac accatgactt tgttaaaaaa ttggaaaaca aaagcttaaa
    18721 aaaagaaaat tttctttttt atctaaaaca agattatatc tatttgctta attacgcaaa
    18781 atgttatgca aggctagcgc ttaattccaa tactgcaaaa gaacttcgtt ttgctatgaa
    18841 atttcaaaat tatatagttg aaggagagat ggaacttcac cgtgcaattt tatctcttgg
    18901 tatcaacaca gatgaactca atacaaaaga tgagagttta gtcaatatag cttattcgcg
    18961 ttatatgtta agcgtgggcg aaaatggaga ttttttagat atgctagttg cacttagtgc
    19021 ttgtgctata ggctatgcaa aaataggtgc taaaattata aaccgtttaa aaaatgacaa
    19081 tttaaaggat catccttata aagagtggat tttaacctat ggaagtgaaa attttcaaaa
    19141 cgaagctaaa gaatttgaag attttgttaa ttcttatact tcaagtgtca atgcacaaaa
    19201 atttcaaaga ctcagtgaaa ttttttatac tgtgacacgc ttagaagtag ccttttggga
    19261 acacgccttg aaaatggagt taaatcttta aacatgggtt tttccattat ttttattcga
    19321 ttttacttgc attattagca atttaactag acatttttta tagatttttc gcaggataaa
    19381 gggcatgaaa tccacaacaa ccaaggtgtt ttcaaaagga attatttcag tcactaaaaa
    19441 tttaaagtaa taccttttgt ttttttgata aaaggtaaaa gaaagagtaa ggttttttgt
    19501 atattcttat catcaatatc ataccttatt catgtttttt caccattaaa acgatctatg
    19561 atgattttca ttgtattctc cttgccacaa gtgaaaattc aattactaca acatctttac
    19621 agttaagttt taattcatca ttttctaaat ttagaatact tatgttttaa gaaattttac
    19681 atcttgcttg cgcatcttct aatttttttg ccaaaagatc aagtttttct tgagttctaa
    19741 aaatccatat tatcccaatt ttgacttctc aactcttctt ataattcaca catttcttga
    19801 gcatttgtca ttatttataa tttctttaaa tttgacctgc catttttgag caaattcata
    19861 agtttttgcc cctttgttaa aacttgcatc ttggtataat ttgtcgcgcc aatacctgct
    19921 aaatatcctc aaccgcatca gctaaaaatt gctcccagtc tattggctcc atgtataaaa
    19981 atacaagaaa gctttcactc acataaattc caccatagaa taatgcatcg ttggacgaat
    20041 agaaaatatc tactaaatca atatttttca aagagcattg cagtatggcg aatttttggc
    20101 aagtcttcta aaattttttc tctgcctaaa atgaagtaca tcacaaaaac ataaactcca
    20161 aatccttcgc tatagcctcg tatttacgaa ttgctatctc tatggcacca aaaccacatc
    20221 tagcagtgca agtcccattt tttcatgata atttttcata aaacgcccag tataattatt
    20281 taaaagataa cctcttcacc gcgtgctgcc tctgcaataa aagcccgcgc acccatttgc
    20341 aactcctgta actgtatcat cttaaagatc ttaaaaccaa tccttgctcc aagaacagct
    20401 actacaacac ttaatttttg gattttactt tctcactgta gccaccgcat gcaaacctgt
    20461 cccacctaaa ccaattacca aaacatcaca agaaggtgat ttatattttt atccatctta
    20521 aaataaatca tctaaagcat aaattccact taaacttgta gctaaaactc ctatactaat
    20581 acaggctatt tttaaaatct cttctagaaa attcacccat atcatattat ttaaaaaatt
    20641 aataatagtt tttaacataa gtcaatctga tataaccatt aagctttaaa aagcttaaac
    20701 tctccattca taaattgcat cctagcactt aaatgatcaa gataaaaaac ttcaaatttt
    20761 ggattttgag gattttcata aagatttaca agataaggat atttttcaaa catcattttt
    20821 ttaacttcca aatttgattc aaaaatcgca ttagccctaa gtcttaaaaa agtgccatct
    20881 tttgcacaag aacaaaattc aataccatta taatttttta tatgcttaaa aagtcctttt
    20941 gtatttgcag tgcaaaaata aattttatct cctacaagta aaggactttg tatgggacgc
    21001 accctaggat ttccacaagt tcctaaagtg gctaaaaatg ctggtgcatt ctcatctaaa
    21061 aattgtgcta tttcttttaa atccataatt tttccttaca tatataagcc accattgatt
    21121 ttaagcacat cacctgtcac ataagaagcg taatcactaa gtaaaaacgc tacacaatta
    21181 gccacctcct caggttctgc aaagcgtttt aaaggaatat tatcttgata attttgtttg
    21241 atttcatcac ttaaaacttc agtcatgtca ctttttataa aacctggggt tacacagtta
    21301 aagcgtaaat ttctacttgc tccttcttta gcaaaagatt tagtcatagc tatcattcca
    21361 cccttgcttg cagaataatt cacttgtcca gcattcccca tttccccaac aatagaagcg
    21421 atatttacaa tagcaccaaa gcgtttttta ctcataactt ttaaagcttc tctacaacct
    21481 aaaaaagctg aacttaaatt tgtatccaca acgccactaa aatcttctaa tttcattctt
    21541 aaagcaagtt tatcgtttgt gacgcctgca ttatttacaa gataacttag ttctccatca
    21601 ctctcaacta taatttttac accgttttca aactcatctt ctttgcttgc atcaaattta
    21661 atcacagcag cattgccacc acttgcaata atttcatctt ttaaagcatc tgcaagttca
    21721 ggttttgaac gataattgat ccaaacttta agcccaaaac ttgccaaagt ttttgcaata
    21781 gaagcaccta ttcctttact tgctccagta atcaaaacat tttttccact aaatttcatt
    21841 gtctatcctt aataagttta attttaaaaa ttacaatctt aacaaatttc ttacaaaaaa
    21901 ggcaaacaaa ctaaaacaaa gcctcgttca tttcttttgg aatttccaaa tctaaaattt
    21961 taagcacact tgcagctata ttactaagcc ccatattatc tttaatctta gaaattccct
    22021 ttacttccac aaaaacaaaa acatcaaaag tagtgtgatt agtaagcaaa tttccttttt
    22081 catcttgcat agcttcgcaa tttccatgat cgcttgtaat gataaaagca taatcatgct
    22141 ttcttgcaca ttccacaacc tcacctaaac aggtatctac tgcttcaact gcttttatag
    22201 ctgcattaaa atcacccgta tgtcctacca tatcaccatt tgcgaaattt accactataa
    22261 aatcttcacc cttttctata ccttttttta ctgcatcaca cacctcaaaa gcactcattt
    22321 gaggtttttc atcgtaagtt tttactttag ggcttggaat taaaaccctt gtttcatttt
    22381 gcaaaagctc ttcttttcca ccattaaaaa agaaagttac atgggcatat ttttctgttt
    22441 ctgcagtatg aagctgacta agccctgctt tagaaatcac ttcagctaaa gtatttacaa
    22501 ttttttcttt ttcaaaaagt acaggaactt gaaatttatc atcataaacg ctcatagtaa
    22561 gtaaattttc aaagactttt tcacgttcaa attctttaaa atttttagag cttaaaactt
    22621 caacaagttg tttcattcta tcgtttctaa aattgataaa aataatgcca tcttcttccc
    22681 ttataccctt ataattttca ctttgagccg ctttaataaa ctcatctgta atcttttcat
    22741 tataagattt ttgcatgtgt tctaacaaat ttgacacttt attcacctta cccaataaac
    22801 actcataata ctcctttact ctatcccaac gcttgtccct atccatggca taaaaacgcc
    22861 cgcaaagcgt ggcaaaatgc acgcctaaat tttcacaaaa tccttttaaa tcttttataa
    22921 aatttaagcc actagttgga cttacatcac gtccatcagt gattgcatga gcaaaaactt
    22981 cattaccatt tttagcacaa atttcaagca tagctttaaa atgtgtatcc atagaatgca
    23041 ctccaccatc actataaagc cctataatat gcactctttc gcattttgct aaaagttttt
    23101 gtaaattttc atttttttca agttctttat tttcaattgc tttattaatg cgtactaagt
    23161 tttgataaat aatacgccca cttcctatac acatatgccc tacttcacta tttcccattt
    23221 gtccttctgg taaacccaca gctaaaccac tagttttcag taaagaattt ggcacttttt
    23281 taaaaaaatt ttcataattt ggttttttag ctactttaaa ggcattaaac ttgctacttt
    23341 tgttatatcc tataccgtct gtaataatta aaacacattt ttgcttcatt ttttctcttt
    23401 tataagaatt tttttggata aattttacta aaattaaact tttaaaaacc aaaaaataag
    23461 gctgggtttt gtattatctt tcagatttaa gtcattatgc tttttttact tatattagtg
    23521 tgcgtgcagg gtttgcattt tttattgctt tatgtttatc tttattttta atgcctaaat
    23581 ttatagcttg ggcaaaagct aaaaatgcca gtcaacctat ttacgaatac gctccagaaa
    23641 cccataaaac caaatgccat actccgacta tgggcgggct tattttcatt agttctgcag
    23701 taattgcaag tttattttgt atcaaatttg ataatatttt cgctataagt gctttgtttt
    23761 gtttgatatt tttttgccta ataggacttg tagatgactt gggcaaggtt ctaaaaaaag
    23821 ataatcattc agggctcagt ccaagaatga aactcttgac gcaaatcatc gcagggctta
    23881 tttgcatctt acctttgtat tttagtacag aatttagtac agaatttttt ataccttttt
    23941 ataaacaccc tctttttgat atggaaattt ttgctatcgc tttttggatt ttagtattaa
    24001 tttctagttc taatgctgta aatttaactg atggacttga tggtttagct acagttccga
    24061 gtattttttc tttatctact ctaggtatat ttttatatct aagcggaaat ttaaattata
    24121 gtgaatattt acttttgcca aaaattcaag gacttggcga agtagtaatt atttgtgctg
    24181 cgttaatcgg tgctttaatg ggatttttat ggtataactg ctaccctgct caagttttta
    24241 tgggggatag tggaagttta gctttgggtg gatttatagg atttttagcc attattagca
    24301 aaaatgaaat tttgctttta ctcataggtt ttgttttcgt tcttgaaact gtttctgtaa
    24361 ttttacaggt tggaagtttt aaaattttta ataaaagagt atttaaaatg gcacccattc
    24421 atcatcattt tgaaaaagtc ggttgggtag aaaataaaat tatagtgcgt ttttggatga
    24481 tagcctttct ttcaaattta cttgcacttg catcaataaa gttgagataa tgaaaatttc
    24541 actttttgga tacggaaaaa ccacacgtgc tattgctgaa aatttagcgg ataaattcgg
    24601 gccttttaat atctatgatg atcattttaa agaaacaaat caagatacat tgggtaattt
    24661 gcttttaaat cctagtagtt ttaatagcag tttaagtcaa cttgaaatac caagtccagg
    24721 ttttccacca aatcataaac tcattcaaaa agcaaaaaat ttacaaagtg aatatgactt
    24781 tttttacgat atcatgccaa aatccatttg gataagcgga accaatggca aaaccaccac
    24841 cactcaaatg acaacacatt tattatcaca tattggtgct gttatgggtg gaaatgtcgg
    24901 aactccttta gcaaaacttg atccttatgc aaaactttgg atacttgaaa cttcatcttt
    24961 tactttgcat tatactcata aagctaaacc tgaaatttat gcacttttac ctataagtcc
    25021 tgatcatctt tcttggcatg gaagttttga taattatgtt caagataaat taagtgtttt
    25081 agaaagaatg aatgaatgtg atgtggcaat actacctaaa atttatgcaa atactcctac
    25141 aaaagcttac ataataagct atgaaaatga aaaagatcta gcaaatcaac ttaagattga
    25201 tatagaaaaa atttctttta aaagcccttt tctactcgat gtcattttgg ctttagctgt
    25261 ggaaaaaatt ttacttgata ctttaaatta tgatctttta aatagttttg taatggaaaa
    25321 aaataaactt gaagagatta aagatagtca aaatagactt tgggtaaatg atactaaagc
    25381 cacaaatgaa agtgctgtaa tggctgcact caatcgttat aaagataaaa aaattcatct
    25441 tattataggt ggagatgata aaggtgtgga tctaagtaat ttgtttgatt ttatgaaagg
    25501 attcgatata gaactctaca ctataggtgt tagtactgaa aaaatgcttg attatgcaaa
    25561 aaaagcaaat ttaaaagctt ataaatgtaa aattttatct aaagctgtaa atgaaatttc
    25621 aaatcgttta aaagctaatg aagtagctct tttaagtcct gcttgt
//
LOCUS       DAPWAA010000019        25301 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.019, whole genome shotgun sequence.
ACCESSION   DAPWAA010000019 DAPWAA010000000
VERSION     DAPWAA010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25301
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.019"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(1..648)
                     /locus_tag="RTF91_000726"
                     /pseudo
     CDS             complement(1..648)
                     /locus_tag="RTF91_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344628.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
     gene            704..1477
                     /locus_tag="RTF91_000727"
     CDS             704..1477
                     /locus_tag="RTF91_000727"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HDZ4943636.1"
                     /translation="MLLGVNIDHIAVLRQARMVNDPDLLEAAFVAAKWGDQITLHVRE
                     DRRHAQDFDLENIIKFCKSPINLECALNDKILNLALKLKPHRVTLVPEKREELTTEGG
                     LCLNHTKLKQSIEKLQNANIEVSLFINPNLEDIEKSHALKAEFIELHTGYYANLHNVL
                     FSNISHTTFALKELDLNKKELQIKFEKELQNIELCAKKGIKLGLKVAAGHGLNYKNVK
                     PIVKIKEICELNIGQSIIARSVFTGLQNAILEMKELIKR"
     gene            1474..2571
                     /gene="pdxA"
                     /locus_tag="RTF91_000728"
     CDS             1474..2571
                     /gene="pdxA"
                     /locus_tag="RTF91_000728"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HDZ4943637.1"
                     /translation="MKKLAISIGDINGIGLEILVRSHEELSKICTPFYFIHESLLYKA
                     LKLLNLKLLNAKIVAFKDSKDYEFKFLKNENSLEIYSFCLPLNFKVNENFNIQAGKID
                     SKSGIYSFLSFKAASYFVYEKHAHALLTLPIHKKAWEEAKLKYKGHTDALRDFFKKNA
                     IMMLGCKELFVGLFSEHIPLAKVSKKITFKNLSIFLKDFYKQTHFKKIGLLGFNPHAG
                     DYGVIGGEEEKIMQKAITFVNAFLYSKKDEKFFKKALKDENLQKELLLNFKGKGIYLP
                     YPLVADTAFTKASLKNCNRLVAMYHDLGLAPLKALYFDKSINVSLNLPIIRVSVDHGT
                     AFDKAYKNVKINTKSYFEAANFALENSHYYV"
     gene            2615..3823
                     /locus_tag="RTF91_000729"
     CDS             2615..3823
                     /locus_tag="RTF91_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ4943638.1"
                     /translation="MQNYKKALFALALSAFCMGVTEFVMAGVLVDVEAYFGVDAKTAG
                     YLTTLYAIGVVIGAPLITIPLSRFHRHIQLLINLGIFALANFIIFFSENFYLTAFARF
                     VAGTQHGVFFVIATLAVSAITPDDKKSSALAIMVTGLTVALVTGVPLGTFIGHYFGFK
                     FIFLLIFIITSLAFFGVWHMMPNNLHPSPTSLKNLIPAFSHQNLLKTYTITICSCGAQ
                     FVLYTYLQKLLVEISGFKVQDTAYILLLYGICAICGNLWGGKMVDKKGAIFSLRLILS
                     IQVLVFLSVFFTMYSKILIIFSVALIGFFAFSTIPALKMLSIAKAKRHTYKVIDSTVS
                     VNEAAFNVGIALASFLGGLVLANFGIEFNALFSVLFVSPALIFAFIFAKDKINYQKFA
                     RKNLKNHKME"
     gene            3870..4178
                     /locus_tag="RTF91_000730"
     CDS             3870..4178
                     /locus_tag="RTF91_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943639.1"
                     /translation="MVVDNTQKTLNAILSTTTKVKEKNTSTDEFQATLNEVKNKEEKE
                     EKKTNSSKFTNKDIDLGAVKEDFRSYAWQKMREDQYKKNEETLLNKLFATINANNTKA
                     "
     gene            4480..5502
                     /locus_tag="RTF91_000731"
     CDS             4480..5502
                     /locus_tag="RTF91_000731"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDZ4943640.1"
                     /translation="MIFIDSCFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLC
                     KDYKKASEVSLQPIDILDVDAAIIFSDILVIPLEMGMNLRFEKGEGPVFDNPISTLED
                     LEKLDDQNAHKKLNYVYDALKLTREKLSQEKALIGFCGSPWTIATYMIEGSGSKNYAK
                     CKKILYQNPELLHKILSKLTQVLKLYLEEQIKAGANAVQIFDSWASALECDKFFEFSF
                     NYMLEISNFTKNKYPNIPVILFPKGISGYLDKIDGNFDVFGVDWSTPLDLARDKLSHK
                     YTLQGNMEPCRLYDKNAIKEGVEKVLKTMQNKAHIFNLGHGILPDIPVENAKYFIKLV
                     QESSAK"
     gene            5499..6401
                     /locus_tag="RTF91_000732"
     CDS             5499..6401
                     /locus_tag="RTF91_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDZ4943641.1"
                     /translation="MKILFGPISSRRFGRSLGIDLSPSKKQCNFDCVYCELDPKKAQE
                     KQDEIISIDKIVSEVKAMLKKNVEFDFLTLTANGEPSLYPYLNELILSLRNIIKDKKL
                     LILSNGTAVLDENKFNALLKLDVVKFSLDSAVPKTFYRIDRALKNIDLEKMIEKMADF
                     RAQFNGDLIMEILVVKDLNDNEEEFKILNQALKKIMPLRVDLSTIDRPPAYAVKKVSE
                     EKLLELSKLIDSTPVLLAKRHYEGKKLSFNEEELLKMLHLRSQSEIDIEVKFDEKSKT
                     LLNQLIKEKKVKILDLAGIKFYKA"
     gene            complement(6372..7342)
                     /locus_tag="RTF91_000733"
                     /pseudo
     CDS             complement(6372..7342)
                     /locus_tag="RTF91_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860460.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(7439..9241)
                     /gene="uvrC"
                     /locus_tag="RTF91_000734"
     CDS             complement(7439..9241)
                     /gene="uvrC"
                     /locus_tag="RTF91_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDZ4943642.1"
                     /translation="MIKDNLENELKTLPNSAGVYQYFNQEGKLLYVGKAKNLKNRVKS
                     YFAFTPNLHANPRNSLRIQKMIEETVHLEFITTNSEVDALILENSFIKQLHPKYNILL
                     RDDKTYPYIYVNLDEEFPRFEITRKLVKKSKIKYFGPFFKGARELLDALYLYYPLKQK
                     ASCKTPCIFYQISRCLAPCDKRISKEKYREILDEAIYALLNPGILVKNLEKQMLILAQ
                     NENYEEAAKIRDQITTIKDLEVKVEIDIAKLEDFEVFALAFENSILSTLRFVVQNGKI
                     ISVNSKIIPVKNDIQWDKNEIYKQLILENFSTDIPLLASFIYVYEEFEDRVLLEKILS
                     QRFDKKISIKIPKIGEKRKICDLAFQNALLNIEKEQKNHDFNMQKELKSYFELENLPN
                     YVEIFDNSHLQGVANVGVMVAYRVNSWDKLKYRKFHLKYKNDYDQMREVLTRRALDFD
                     KMPPPDLWLIDGGRALLDLAKEIIASSGANVDILAISKEKIDAKAYRAKGGAKDKIHS
                     LKGEFSLSTNDKKLQFLQKLRDEAHRFAISFHRNTKKKQDLTSSKLINSGISAGVIQK
                     LLAFYGNFESIYKADFKELMMLVGKKAAQKIKEN"
     gene            complement(9234..9728)
                     /locus_tag="RTF91_000735"
     CDS             complement(9234..9728)
                     /locus_tag="RTF91_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943643.1"
                     /translation="MRKRSNIKMIKNASVIINELMDKPHYKPLKTLFFCKDFLSSFPL
                     AKQCLIAKIYVKNHILNIITLHPAAYQELNHDDSKNYIKFLIKAYGQKYPLSGFVDIK
                     DIKIFSQKYTYAANKNKNDEKLSKNSYLELSKGEFKNCFEDEKLFNKFEDLRQLIKKG
                     SNLD"
     gene            9867..11402
                     /gene="guaA"
                     /locus_tag="RTF91_000736"
     CDS             9867..11402
                     /gene="guaA"
                     /locus_tag="RTF91_000736"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDZ4943644.1"
                     /translation="MKKADILVLDFGSQYTQLIARRLREQGVYAEILPFNVSLADIQA
                     KQPKGIILSGGPASVYATDAYFCDKGVFDLGLPVLGICYGMQLMAHHYKATVAPAGHK
                     EYGKANIEVKKDSALFKNLPKKQTVWMSHSDKVENLPQGFEVLATSENSPFCAFGNED
                     KKFFALQFHPEVQHSEFGKNILKNFAKYACNCESVWNMGSFAKTQAEKIREEIGNNKV
                     LCAVSGGVDSSVVAALLASAIKEQVIVVFVDNGLLRSGEKEQVEFMFKNTLGIDLISI
                     DASEIFLSRLANITNPEQKRKIIGNTFIEVFEKEAKKHKDVKYLAQGTLYTDIIESSV
                     VGASKTIKSHHNVGGLPEKMNLKLIEPLKEIFKDEVRTLGLELGLSKEVVYRHPFPGP
                     GLAIRIMGEVNRPSLELLRKADVVLLEELKSTGWYDKTWQAFCVLLNVKSVGVMGDNR
                     TYDNAVCIRVVDASDGMTATFSHLPYEILENISRRIINEVEGINRVVYDISSKPPATI
                     EWE"
     gene            11486..12946
                     /locus_tag="RTF91_000737"
     CDS             11486..12946
                     /locus_tag="RTF91_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943645.1"
                     /translation="MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGML
                     VEFRTLSSEKKAEDNKPDQTSKTITGIKPSKFQEFKEGDFITENDFWKTDNDEELEDL
                     QQSRRSAYITELYRTTDFDTIEKIPLSLTIPQAIQKYFAHEILSVEALQTNLQDEKEI
                     PCILDYLILKRFLFKAYDTLIFMDNSIDQTQFSALKSIMMHLENSYKQMIADQKPNTT
                     KIFNETFLSLQCHYQALMATIDTRKNRLASLEAQMKNLQSEINLKSNAANPDPEKLKV
                     QQERLVKLQEEAEYYRTTLKRLDAIREDFYKKNYNIFENAFKLSREKLFKKIVTGLNL
                     CATIMDVKIWRLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKSALNPFDHKL
                     LVYIQKITKEQRKKFLVVTSNLDLLCKLKIENFSQNPYYLVKYAPKKVNYQSLMRDNT
                     FDIVYIDEKNVWENVADIILQGKHFDKSGKTKFKLI"
     gene            13185..14435
                     /gene="purD"
                     /locus_tag="RTF91_000738"
     CDS             13185..14435
                     /gene="purD"
                     /locus_tag="RTF91_000738"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDZ4943646.1"
                     /translation="MKIMILGSGAREYSIALALKRVDKNLEFYFAPGNGATESLGTNL
                     NLKDPVVLATYAKEKGFDLCIVGNESFLAEGVVDIFKQQGLAIFGPSKAAAMLETSKS
                     FMKSFLKKYRIKTAKFLNTNDIEKAKNFIYSLTPPIVVKADGLCAGKGVIIAKTHEEA
                     IEETAKMLSGESFGDAGKLVVIEEFLDGYELSIFAVCDGNDFVLLPVAQDHKKLLDND
                     QGPNTGGMGAYAPSSLANESLLRKVQKDIILPTLAGMKKEGTEFCGVLFIGAMVVGNK
                     PYVLEFNVRFGDPECEVLMPLIEDPLELILAATQRRLRHVKIKIKKEFAVCVVCASEN
                     YPYKSSPKSQIIVNNIPENSHISYAGVSLEDGKLMADGGRVLVCVGTGKSIEEAQKNA
                     YKLCDNVNFKGKQYRKDIAHQVLK"
     gene            14432..14884
                     /locus_tag="RTF91_000739"
     CDS             14432..14884
                     /locus_tag="RTF91_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDZ4943647.1"
                     /translation="MKENLQNRLERENLKIASFGKRVLAFLIDDMIISLIVFIIFYDR
                     LILAKDLFEMTQIIGNFYLGFILLHFSYQTIFTYLYGASLGKILCKIIILDENLLDKP
                     NLTQSCIRSAVRQVSAMAFMLGFAWALSNDLRKAWEDYLARTIVVDVA"
     gene            14874..16922
                     /locus_tag="RTF91_000740"
     CDS             14874..16922
                     /locus_tag="RTF91_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HDZ4943648.1"
                     /translation="MWRKFSLLLGASIALNAAQVDIYALDAKKEGDILTANNDVIIFS
                     DFYFITANKAIYNEKTGDVELFGDVNILRGQNERSHSDYAKINLNSNQADFRNFFFSN
                     NNLEVWFQSKTSHLNNKVFESKISAVSSCNVENPDWEIRFSKGWLNRETNFVHLYNAK
                     LYVKNTPVFYLPYFGFSADTHRQSGLLIPKIVLKSNEGLYYEQPIYIVAQENWDLELD
                     PQVRTNRGFGLYSTLRFLDSPYSAGELNFGAFRENNSYFHDENLKNKTHYGIELKYSR
                     DDLIKSLLSDNFQEGLWIDATYLNDVDYLNLGSRDYRDLNSLVTSKINYFLADENNFY
                     GAYARYYIDTSKLNNNTTLQEFPSFQYHRFLNNLFDERLRYSFDASFHNFYRPAGSYA
                     NELNLDLPISYHNAFFGDFLHFTFTERFYASFINYSNDPQRNHEHYFRNIHDFNLYTD
                     LSKAYENFFHTLNLGINYVLPGAKSGKITQDYLEEFDKENEHTNLYAVQYFYNNEGQK
                     KIKHRISLDYLNKQNEFYELENLLTYYFNENINLNSEVLYSYKQSRFTNVISQIEVNT
                     NSKFNWMFSHAYQNNEYGKYSFIGTRANYITTPNYNLFGGIWFDTQRAHANMWELGYT
                     YQRKCWNYSLMYRERIDPQLTSGGITAKNQSGVYFIFNFYPLGGVKYDFSLAESENKI
                     "
     gene            16992..19145
                     /locus_tag="RTF91_000741"
     CDS             16992..19145
                     /locus_tag="RTF91_000741"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDZ4943649.1"
                     /translation="MQYSIEINKNTEIFDIDKVAKQATGAVLMKQGKSVVLATVAREE
                     KQVEEDFLPLTVQYIEKTYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGY
                     AYPTQIVVMVLSADPKVDLQVMSLNAASVALYLSDIPMKAPVCGVRIGRIDGNFILNP
                     NNEELKNSTLDLYVAGVKDELLMIEMRALPDQKENEIFIEAPYADVLTQTTSQNMNEL
                     NEDEILEALNLAQKAILNGSNAYKEAFSKHRKNSQIELKNEIEYPEILAFVENNFQKQ
                     IKEAINQMAKSERASELNKIAKEILNLEIAKDWSEESILNTLAKIKRKLIREQILDKG
                     KRADGRSLNEVRPISIETNILPNAHGSCLFTRGQTQALVVATLGGENDAQMIDLLTEK
                     NPINERFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSVDENYPYVIRLVS
                     EILESNGSSSMATVCGGSLALKAAGVPSLKLVAGVAMGLIFEDNKHAILTDIMGLEDH
                     DGDMDFKVAGSKDGVTALQMDIKLGGIDQETLKQALYQAKEGRIHILNIMEEAAKEIV
                     VNEEVLPKLELFSVDPSKIVDIIGQAGKTIKEIIEKFGVSIDLDREKGEVKIAGNQNE
                     QIKAAKDYIINITSSQKGTKKNSKDISGFELGQEFQGIVKKIAPFGAFVELKNGVDGL
                     LHNSKIKNLDLSENQSLKVKISEIKNGKISVDLCE"
     gene            19142..19624
                     /locus_tag="RTF91_000742"
     CDS             19142..19624
                     /locus_tag="RTF91_000742"
                     /EC_number="3.2.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-deoxyinosine glycosylase"
                     /protein_id="HDZ4943650.1"
                     /translation="MNEFLTHPFKPFFDKDSKILILGSFPSIKSRQDGFYYQHPRNRF
                     WPILETLFDAKLENIAKQQAFLKEKNIALWDVLQSCKIKNSDDKTISYAKANDLNLIL
                     SQAKIQAIFTTGQSAYKFFTKFHPHLKAIALPSTSPANLNFSFEKLLQSYEILKDFIK
                     "
     gene            19894..20103
                     /locus_tag="RTF91_000743"
     CDS             19894..20103
                     /locus_tag="RTF91_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HDZ4943651.1"
                     /translation="MPFVNIRITKENEQPTKEQKQELIAGITDLLAKILNKNKNSTVV
                     IIDEIDTDNYGFGGKSITQVRQEKS"
     gene            complement(20100..20762)
                     /locus_tag="RTF91_000744"
     CDS             complement(20100..20762)
                     /locus_tag="RTF91_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HDZ4943652.1"
                     /translation="MEMILFVLVVILLGILFGVLFRQYKSSKIQEKSTQSFSDIMQLK
                     SIGELSVFQVFSKEIVTKKDSAFNGIWKSILGWSLSERQIALIFEFEITFLYDLRDKN
                     FDILSLGDDAYKIIMPECKYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDK
                     NKLIKEAKDEVKDLSLNLIQNLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLD
                     VN"
     gene            complement(20782..21966)
                     /locus_tag="RTF91_000745"
     CDS             complement(20782..21966)
                     /locus_tag="RTF91_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ4943653.1"
                     /translation="MENFNKTLLVCWFGVFTTSMGLSQIAPILPFYIKELGYVDTSEI
                     AFYSGLAFGITPLFMAVFSPLWAFLGAKYGYKNMLLRASFGMSVLTLWLSFAHSALEV
                     VFVRGLTGIISGFTSAAIVFIAVIAPKEKVAYALGTLSTASISGSLLGPLFGGFVAEF
                     FSISAVFDVVAFLIACSFVTIYFFIHERTIQKEAKKNTQKVKESKTLIIVLFITTFVI
                     QFGTFGVMPILSIYVEQIHQGGNLALWAGIVVAASGISNLFFASKLGKIADKIGPSKI
                     IFVALIFCGVCFYLQAVANNVYTLIFVRLLIGIGLGGLLPCVNALLKKSVSAKNLSVI
                     FGFNQTCQFLGNFCGAFGGGLMASNFSVEFVFTFVCLIFIVNAFIFLAFERKYIFSNQ
                     GL"
     gene            22020..22475
                     /locus_tag="RTF91_000746"
     CDS             22020..22475
                     /locus_tag="RTF91_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HDZ4943654.1"
                     /translation="MKKIVFICLGNICRSPMAEFIMKDLVKKANLEKNFFISSAGTSG
                     EHDGETMHYGAKNKLAEFNIEHKNFTSKKLTQKLCDENDFLITMDNSNFKNVLKNFNN
                     TQNKVLKITDFSPNLGYDEVPDPWYSGNFDETYKILSLACKNLLVFLSK"
     gene            22729..24018
                     /locus_tag="RTF91_000747"
     CDS             22729..24018
                     /locus_tag="RTF91_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane protein"
                     /protein_id="HDZ4943655.1"
                     /translation="MKLVKLSLVAALAAGAFSAANATPLEEVIKDVDVSGVLRYRYDT
                     GRFGKDFDLSNVTANPTENALINSKQTHKYRAQVNLSAAIADNFKAFIQLDYNSQDGG
                     YGTNSISNTSDTLTVRQLYLTYTNEDVATSIIAGKQQLNTIWTDNDIDGLVGTGIKVV
                     NNSIDGLTLAAFAMDSFNGYNADINAKGDGDVSSALNWDKNIYGAAAIGSYDIFGGQF
                     NPQLWLAYMSDNAFLYALDLAYSTSIFDGINWTIEGAYLGNSVDNELENKFGQNTVGN
                     GNFFALRGTIEVNGWDATLGGLYYGDKDKSTVTVIEDQGNLGSLLAGEEIFYTAGSKL
                     NGDIGRNIFGFITAGYTFNETVRVGADFVYGGTKTHSTTYLGGGDKLEAVARVNYKYS
                     PKLNFSAFYSYVNVDSNNKVEGEGDHNTVRLQALYKF"
     gene            complement(24148..25272)
                     /gene="dnaJ"
                     /locus_tag="RTF91_000748"
     CDS             complement(24148..25272)
                     /gene="dnaJ"
                     /locus_tag="RTF91_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDZ4943656.1"
                     /translation="MEISYYEILEITQSADKETIKKAYRKMALKYHPDRNQGDKEAED
                     KFKLINEAYEVLSNDEKRAIYDRYGKDALKGGGFSSSSSSFGGFEDLGDIFSSFFGEG
                     FGSSSHRRKSSSDEKIPSDFIVNLKLSFKEAVFGCKKNIDFTYKCSCKTCNGTGAKDG
                     KLQTCPKCKGRGQVGVSQGFITFAQTCPDCQGSGEKASEKCSDCKGLGYNESKDSVEL
                     NIPEGVDTGMKLRVNAKGNILKNGARGDMYVKIIAAEDDTFIRDDDDIYIEFPVFFTQ
                     AILGQSIKVPTIRGEATLNLPKGAKDGQRFVLEKEGVKDVHSSRIGNQIVQISIKFPN
                     SLNDEQRELLEKLSESFGIKDGMHQEQKGLFEKIANWFKS"
BASE COUNT         9255 a         3985 c         3741 g         8320 t
ORIGIN      
        1 atttcatttt tttgaatttc aaaaaatata aaaattttat atttttcata cttgcgaaac
       61 aaatttcttc tcttaaaccc tcatcaatca ctaaaagtta tgcctattaa ataagtaaac
      121 aatccgcatt taaataattc tcatcatacc tacttctttt atggcttttt tctccatata
      181 aaagtctaac agcataattt aaaaaatcct tataacaaag ttttgccatc taccctaact
      241 gcttgatact tttcatagtt tatattttgt tttaatatac taagagtagc aagaatactt
      301 gaatttaaaa ccactgtttt agcttaatga agctttttta atcctaatca cctcattaaa
      361 acctgtttgt atgcctaaaa cactaatcct atcttcgctt ttagcatcta taattaaatc
      421 aatcccaaaa actcttttta aatcaataaa aatttcattt gtattacttg cctcttaaag
      481 gctacagtcg ctaaagcatt tttaatcttt gcatagctct ttaaattttt ccactttgat
      541 ttaaattttt tgccgtagca atgataaatt cgtattcttt taatttattt aatttttatc
      601 catttacact gttcttaaag tatttaaacc aagatctata cctaatatga ctttccttgt
      661 ttgattttat agtataatag caaaaaagtt ctaaaggaaa aatatgcttt taggtgtaaa
      721 tatcgatcat atagcagtat taagacaagc taggatggta aatgatcctg atcttttaga
      781 agctgctttt gtagcggcca aatggggtga tcaaatcact ttgcatgtaa gagaagatcg
      841 ccgtcatgct caggatttcg acttagaaaa tattataaaa ttttgcaaaa gtcctatcaa
      901 tttagaatgt gctttaaatg ataaaatttt aaatttagcc cttaaactca aacctcatcg
      961 tgttacttta gtgcctgaaa aaagagaaga gcttaccaca gaaggagggc tttgcttaaa
     1021 tcataccaaa ttaaaacaaa gtatagaaaa acttcaaaat gcaaacattg aagtttcact
     1081 ttttatcaat cctaacttag aagatataga aaaatcacat gcattaaaag ctgaatttat
     1141 agaacttcat acagggtatt atgctaattt acataacgta ctttttagta atatttctca
     1201 tactactttt gccttgaaag aacttgattt aaacaaaaaa gaattgcaaa taaaatttga
     1261 aaaagaattg caaaatatag aactttgtgc taaaaaaggc ataaaacttg gcttaaaagt
     1321 agctgcgggt catggcttaa attataaaaa tgtaaaaccc atagtaaaaa tcaaagaaat
     1381 ttgcgagtta aatataggac aaagtataat agcaagatct gtatttacag gacttcaaaa
     1441 cgctatttta gaaatgaaag aacttattaa aagatgaaaa aactagccat tagcataggc
     1501 gatataaacg gcataggact tgaaattttg gtgcgttctc atgaagaact tagcaaaatt
     1561 tgcactcctt tttattttat ccatgaaagt ttactttata aagctttaaa gcttttaaat
     1621 ttaaaacttt taaatgcaaa aatcgtagct tttaaagaca gtaaagatta tgagtttaaa
     1681 tttcttaaaa atgaaaattc tcttgaaatt tattcttttt gccttccctt aaactttaaa
     1741 gtgaatgaaa attttaatat acaagctgga aaaatagact caaaaagtgg aatttatagc
     1801 tttttaagtt ttaaagcggc aagttatttt gtctatgaaa aacatgctca tgccttgcta
     1861 actctaccta tacataaaaa agcttgggaa gaggctaagc ttaaatacaa aggacatacc
     1921 gatgctctaa gggatttttt taaaaaaaat gccattatga tgctaggttg taaagaactt
     1981 tttgtaggac tttttagcga acatataccc ttagctaaag tgagtaaaaa aatcaccttt
     2041 aaaaacttaa gcatcttttt aaaagacttt tataaacaaa cacattttaa aaaaattgga
     2101 cttttaggtt ttaatccaca cgctggagat tatggagtta taggtggaga agaagaaaaa
     2161 atcatgcaaa aagccataac ctttgtcaat gcttttttat attcaaaaaa agatgaaaaa
     2221 ttttttaaaa aagccttaaa agatgaaaat ttacaaaaag aattactttt aaattttaaa
     2281 ggcaaaggta tttatctacc ctatccttta gtggcagata cagcttttac taaggctagt
     2341 ttaaaaaact gcaatcgctt agtggctatg tatcatgatc tagggcttgc ccctttaaaa
     2401 gccttatatt ttgacaaaag cattaatgta agtttaaatt tacccattat acgcgtaagt
     2461 gtagaccatg gcactgcttt tgataaagct tataaaaatg ttaaaattaa cactaaaagc
     2521 tattttgaag cagctaattt tgctctagaa aattctcatt actatgtata aatttacaat
     2581 aaatcaattt aaaatatctt aacaaggatt gtaaatgcaa aattataaaa aagctctttt
     2641 tgccctagct cttagtgctt tttgtatggg cgtaaccgaa tttgtcatgg ccggagtttt
     2701 ggttgatgtt gaagcgtatt ttggcgtgga tgcaaaaact gcaggttatc ttacaacctt
     2761 atatgccata ggcgttgtta taggtgctcc tcttattacc atacctttaa gccgttttca
     2821 tagacacata caacttttaa tcaatcttgg aatttttgcc ctagcaaatt tcatcatttt
     2881 ttttagcgaa aatttctatc ttacagcatt tgctcgtttt gtcgcaggaa cacaacatgg
     2941 agtgtttttc gtcattgcta ctttagctgt tagcgctata accccggatg ataaaaaatc
     3001 aagtgcccta gccataatgg tcacaggact taccgtagct ttagttactg gagtgccact
     3061 tggaactttt atagggcatt attttggatt taaatttatc tttttactca tttttattat
     3121 cacaagctta gccttttttg gagtgtggca tatgatgccc aataatttac atcctagtcc
     3181 gacaagtctt aaaaatttaa tccctgcttt ttcgcatcaa aatttattaa aaacttatac
     3241 tataaccatt tgtagttgcg gggctcaatt tgttctttat acttatttac aaaaattact
     3301 tgtagaaata agtggtttta aagtccaaga tacagcttac atcttgcttt tatatggaat
     3361 ttgcgccatt tgtggaaatt tatggggtgg aaaaatggta gataaaaaag gtgctatttt
     3421 ttctttgcgt cttattttaa gtatacaagt tttagtcttt ttaagcgtat tttttaccat
     3481 gtattctaaa attttaatca tttttagcgt agctttgata ggattttttg ccttttctac
     3541 tatacctgct ttaaaaatgc ttagtatcgc taaggctaaa cgccatactt ataaggtcat
     3601 agatagtaca gtgagtgtca acgaagcagc ttttaatgta ggtatagcct tagcaagttt
     3661 tttaggagga cttgttttgg caaattttgg catagaattt aatgctttat tttcagtact
     3721 ttttgtaagt cctgctttga tttttgcttt catttttgcc aaagataaga taaattatca
     3781 aaaatttgct agaaaaaatt taaaaaatca taaaatggaa tagaaattgc ttgtttattt
     3841 aatgtaaaaa ttaaataaag gaggagaaaa tggtagtaga taatactcaa aaaacactaa
     3901 atgctatcct tagcaccaca actaaggtta aagagaaaaa tacttcaaca gatgaatttc
     3961 aagctacatt aaatgaagta aaaaacaaag aagaaaaaga agagaaaaaa acaaactcaa
     4021 gcaaatttac caataaggat attgatcttg gtgctgttaa agaagatttt agatcttatg
     4081 cttggcaaaa aatgagagag gatcaatata aaaaaaatga ggagacttta ttaaataagc
     4141 tttttgctac aattaatgca aataacacaa aagcttaata tgcaaattaa ccaaagctca
     4201 aactatataa acgagaattt taataattct cgtaaaaatt ctgataattc aaaaatttcc
     4261 tatgagatac tccatttaaa gttttactta aagaagtaaa agaatttatt ggccctaaaa
     4321 ttaaaaaatt taaagaagaa ctcatattaa acaaaaaaca agagaatatg aaagaaaaat
     4381 ggttcctgat ttagctcttt tgcataaagc aaatatcgaa aaattgataa tttaatttat
     4441 caatttctgt tataattttg ctaaaaacaa aggaaaataa tgatttttat tgattcttgc
     4501 tttaaaaaac ctacacctta cacccctatt tggatgatgc gtcaagcagg aagatatttg
     4561 ccagaatata tggaagtaag aaaacaagcg ggtgattttc tctccttgtg caaagactat
     4621 aaaaaagctt ctgaggtttc tttacaacct attgatattt tagatgttga tgcggcaatc
     4681 attttttcag atatcttagt tatccctctt gaaatgggta tgaatttgcg ttttgaaaaa
     4741 ggagaaggac ctgtttttga taatcctatt tcaaccctag aagacttaga aaagcttgat
     4801 gatcaaaatg ctcataaaaa attaaattat gtttatgatg ccttaaaact tactagagaa
     4861 aaattatcac aagaaaaagc tttaatagga ttttgcggaa gtccttggac catagctact
     4921 tatatgatag aaggaagtgg aagtaaaaat tatgcaaaat gcaaaaaaat actttatcaa
     4981 aacccagaac ttttacataa aattctaagc aaactaactc aagttttaaa gctttattta
     5041 gaagagcaaa tcaaagcagg tgctaatgct gtacaaattt ttgacagttg ggcaagtgct
     5101 ttagaatgtg ataaattttt tgaattttct ttcaattata tgcttgaaat ttcaaatttt
     5161 actaaaaata aatacccaaa tatacctgtg attttattcc ctaaaggcat tagtggttat
     5221 ttggataaaa tcgatggtaa ttttgatgtt tttggggttg attggagcac tccacttgac
     5281 ttagcacgtg ataaactatc acacaaatac actcttcaag gcaacatgga gccttgtaga
     5341 ctttatgata aaaacgctat taaagaagga gtggaaaaag tattaaaaac tatgcaaaac
     5401 aaagctcata ttttcaactt aggacatgga attttgcctg atattcctgt tgaaaatgca
     5461 aaatatttta tcaaacttgt acaagaaagt tcagctaaat gaaaatactt tttggcccta
     5521 ttagttcaag gcgttttgga agatctttag gtatagattt aagtcctagc aaaaaacagt
     5581 gtaattttga ttgcgtttat tgcgagcttg atccaaaaaa agcccaagaa aaacaagatg
     5641 aaattattag tatagacaaa atcgtctccg aagtaaaagc tatgcttaaa aaaaatgttg
     5701 aatttgattt tcttaccctt actgccaatg gagagcctag tctttatcct tatctaaatg
     5761 agcttatttt atctttacgc aacattatca aagataagaa actacttatt ttaagtaatg
     5821 gtacagctgt attagatgaa aataaattta acgctttatt aaaactagat gtagttaaat
     5881 ttagcctaga tagtgcagtt cctaaaactt tttatcgtat tgatagagcc ttaaaaaaca
     5941 ttgatttaga aaaaatgata gaaaaaatgg cagattttag agctcaattt aatggggatt
     6001 tgattatgga aattcttgtt gtcaaagatc ttaatgacaa cgaagaagaa tttaaaatac
     6061 ttaatcaagc tttaaaaaaa atcatgcctt taagggttga tctaagcacc atagatagac
     6121 ctccagctta tgcggttaaa aaagtaagcg aagaaaaact tttagaactt tccaaactta
     6181 tagattctac tccggtactc ttagccaaaa gacattatga aggtaaaaaa ctgagtttta
     6241 atgaggaaga attattaaaa atgcttcatt tacgttctca aagtgaaata gacatagaag
     6301 tgaaatttga tgaaaaatct aaaactctct taaatcaact tatcaaagaa aaaaaggtaa
     6361 agattcttga tttagctggg attaagtttt ataaggccta aacttcttgg caaatacttt
     6421 ctaacaagat cgtttttact tatatcactt aaaacttcgc tcacacgatc aaagtttcta
     6481 actttttcct tggaaaaaaa gataatatga ctaagtaaat ttctcatttg ttcaagatca
     6541 aatttaatca attcatagtc aagcaaaatc aaacgataaa tttctttgct taattcttgt
     6601 tttaaatgac taaaagaatt tatacatata tttttgttac attgtttttc tattatatta
     6661 aaaacaatgt tgcatcaaaa tcattttgct taaaaagtaa tacattattt tgataagggg
     6721 ttttaaattt taaagtataa acctcatcaa gcttgttttg taagatattt tcaagatctt
     6781 tttttcaaaa ggtaaagaaa aaatactcat tatgagtatt tttatggtgg cccatcacga
     6841 taaaatcata gtttttcttt acgctttcat ttaaaatttt atccttaaat aaaaaccaaa
     6901 tgaaaatcat taacatcaaa acttaaattt ttaaaacaaa tactttctat accaaaatac
     6961 gaaagcaaat ttgcaattaa aaaattctca agctcatcat cattaactat agtcacgctt
     7021 gcttcaaatt gtaaaacctt tccattgaga tgtccttata agatttaatt ccaatctgat
     7081 ttgacctttt tgagaattta aagcatttaa aattaaagaa ttaatttctt tatcatgcgt
     7141 ttcatttaaa caacgtattg cattagatat gtttccaagc tgatataaat tttcttctaa
     7201 aaatgcaaat atcaatcttt ttttgaaaaa tttaaaaaat tattttgcat acaaaaaatt
     7261 ttttaataca ttttgtttat attttttgcc taaaagtaag aataaaaagc gttaaagaca
     7321 aaataaaaac attagacaac atacctattt taattactct acaacactat taagttttaa
     7381 aatatcaatc cttaaaatat gctaaaatca gataaaaata aaaattatcc ctgctaaatc
     7441 aattttcttt tattttctgt gctgctttct tacccacaag catcataagc tctttaaaat
     7501 cagccttata tatggattca aaattcccat aaaacgctaa aagtttttgt ataacccccg
     7561 cactaatccc tgaatttata agcttagaac ttgttaagtc ttgttttttc ttagtattcc
     7621 gatgaaagct aatagcaaag cgatgtgctt catctcttaa tttctgcaag aattgtagtt
     7681 ttttatcgtt agtacttagg ctaaattctc cttttaaaga atgaatttta tccttagcac
     7741 ctcctttagc cctatatgct tttgcatcga tcttttcttt tgaaatagcc aaaatatcaa
     7801 cattagcccc gctacttgca atgatttctt tagccaaatc cagcaaagcc ctccctccat
     7861 ctataagcca taaatcaggg ggtggcattt tatcaaagtc taaagctcta cgcgttaaaa
     7921 cttcacgcat ttgatcataa tcatttttat attttaaatg aaatttacga tattttaact
     7981 tatcccaaga atttactcta taagctacca taactccaac atttgccaca ccttgcaaat
     8041 gagaattatc aaaaatttct acataatttg gtaaattttc gagttcaaaa taagacttta
     8101 attctttttg catattaaaa tcatgatttt tttgctcttt ttctatattt aagagtgcat
     8161 tttgaaaagc taaatcacaa atctttcttt tttctcctat tttaggtatt ttaatactga
     8221 tttttttatc aaatctttgg cttaaaattt tttctaaaag caccctatct tcaaattctt
     8281 cataaacata aataaagctt gcaagtaaag gaatatctgt gctaaaattt tctaaaataa
     8341 gttgcttata gatttcattt ttatcccatt gtatatcatt ttttacagga ataatcttag
     8401 aatttacact gatgattttt ccattttgca ctacaaaacg caaagttgaa agtatagaat
     8461 tttcaaaagc caaagcaaat acttcaaaat cttctaattt tgcaatatct atttcaactt
     8521 taacctctaa atctttaatc gttgtaattt gatcccttat ttttgccgct tcttcataat
     8581 tttcattttg agctaaaata agcatttgtt tttctaaatt tttaaccaaa ataccagggt
     8641 ttaaaagtgc ataaatagcc tcatctaaaa tttcacgata tttttcttta ctgatgcgtt
     8701 tatcacaagg cgcaagacaa cgagaaattt gataaaaaat acaaggggtc ttacaacttg
     8761 ctttttgctt taaaggataa tacaaataaa gtgcatctaa aagttctcta gcgcctttaa
     8821 aaaaaggacc aaagtattta attttacttt tttttactaa ttttctagtg atctcaaaac
     8881 gcggaaattc ttcatcaaga ttcacataaa tataaggata agttttatca tcccttaata
     8941 aaatattata ttttggatgc aattgtttaa taaaagaatt ttccaaaatt aaagcatcca
     9001 cttctgaatt ggtagtgata aattctagat gcactgtttc ttcaatcatt ttttgaattc
     9061 ttaaagaatt tcttggattt gcatgcaaat ttggagtaaa agcaaaataa gatttaacac
     9121 gatttttaag atttttagcc ttgcctacat ataaaagctt tccttcttga ttaaagtatt
     9181 gatacactcc agcgctatta ggaagagttt ttaactcatt ttctaaattg tctttaatca
     9241 agattagaac ctttttttat aagttgtctt aaatcttcaa atttattaaa taatttctca
     9301 tcttcaaaac aatttttaaa ctcgccttta gaaagctcca aataagaatt tttagaaagc
     9361 ttttcatcat ttttgttttt atttgccgca taggtgtatt tttgagaaaa gatttttata
     9421 tcttttatat caacaaaccc gcttaaagga tatttttgtc catatgcttt tatgagaaat
     9481 ttaatataat ttttgctatc atcatgattt aattcttgat aagctgctgg atgtaaggtt
     9541 attatattta aaatatgatt ttttacataa attttagcaa tcaaacattg cttagcaagc
     9601 ggaaaagaac ttaaaaaatc tttacaaaaa aataaggttt ttaaaggttt ataatgaggt
     9661 ttatccatca gttcattaat aataacacta gcgtttttaa tcatcttaat attacttctt
     9721 tttctcataa gatgatttta gcatttcttt tcttaatttt cttgtgtgct tgcggctata
     9781 aaggcaaccc tcaatacaca agttatgaac aaaatggttc agtaaaaact attaaaaaat
     9841 acgaacaatt acacaggtgg taaataatga aaaaagcaga tattttagtt ttggattttg
     9901 gctctcaata cacccaactt atagcaagac gcttaagaga gcaaggtgtt tatgctgaaa
     9961 ttttaccttt taatgtcagt ttagccgata ttcaggctaa gcaaccaaaa ggcattattt
    10021 taagcggtgg tccagcaagt gtctatgcaa ctgatgcgta tttttgtgat aaaggtgtat
    10081 ttgatttagg tttgcctgtt cttggaattt gttatggcat gcaacttatg gcacatcatt
    10141 ataaagctac agtagcacct gcaggacata aagaatatgg taaagcaaat atagaagtta
    10201 aaaaagacag cgctttattt aaaaatctcc ctaaaaaaca aaccgtttgg atgagtcatt
    10261 ctgataaagt agaaaattta cctcaaggtt ttgaggtttt agctacaagt gaaaatagtc
    10321 ctttttgtgc ttttggaaat gaagataaaa aattctttgc tttacaattt catccagaag
    10381 tgcaacacag tgaatttggt aaaaatatct taaaaaattt cgctaaatac gcttgtaatt
    10441 gtgaaagcgt ttggaatatg ggttcttttg caaaaactca agcagaaaaa atccgcgaag
    10501 aaataggtaa taataaagtt ctttgtgcag taagtggtgg agtcgatagc agcgtggttg
    10561 ctgcactttt agctagtgct ataaaagaac aagttatagt ggtttttgta gataatggac
    10621 ttttaagaag tggtgaaaaa gaacaagttg aatttatgtt taaaaatact ttaggcattg
    10681 atcttatcag tattgatgca agtgaaattt tcttaagtcg cctagccaat attacaaacc
    10741 ctgaacaaaa aagaaaaatc ataggaaata cctttataga agtttttgaa aaagaagcaa
    10801 aaaaacataa agatgtaaaa tatctcgccc aaggcacact ttataccgat atcatagaaa
    10861 gttcggttgt aggcgcaagc aaaaccatca aaagccatca taatgtaggc ggtttacctg
    10921 aaaaaatgaa tcttaagctt atcgagcctt taaaagaaat ttttaaagat gaagtacgca
    10981 ccttaggact tgaacttgga cttagcaaag aagtagttta tcgccatcct ttccctggac
    11041 cagggcttgc tatacgcatt atgggtgaag taaaccgtcc gagcttagaa ttactacgca
    11101 aagctgatgt agttttactt gaagaattaa aaagcacagg ttggtatgat aaaacctggc
    11161 aagcattttg tgtactttta aatgttaaaa gtgttggagt tatgggagat aatcgcacct
    11221 atgataatgc agtttgcata cgcgttgtag atgcaagcga tggcatgaca gccaccttct
    11281 cacacttacc atatgaaatt ttagaaaata taagtcgtcg catcatcaat gaagtagaag
    11341 gtataaaccg tgtagtttat gatatttcaa gtaaaccgcc tgcaaccata gaatgggaat
    11401 aatccatttt tctagctctt attttattat aatattttta taaaaataag gctaaaattc
    11461 attcaataaa tttcaaggaa gaaatatgca cggaaaaata gcaatttaca tggattctac
    11521 aggacgtgga accgttacaa actcagcaaa tacttttttt gatttcaacc gccaaatttg
    11581 gaacgataaa aaaagcatgc caagtgttgg tatgcttgta gaatttagaa ctctttctag
    11641 cgaaaaaaag gcagaagata acaagcctga tcaaacaagc aaaaccataa caggtataaa
    11701 gccttcaaaa tttcaagaat ttaaagaagg agattttatc accgaaaatg atttttggaa
    11761 gactgataat gatgaagaat tagaagactt acaacaatca agaagaagtg cttatataac
    11821 agaactttat agaacaacag attttgatac tatagaaaaa attcctcttt ctttaaccat
    11881 acctcaagct atacaaaaat attttgccca tgaaatttta tctgtagaag cacttcaaac
    11941 caatctacaa gacgaaaaag aaattccttg catacttgat tatcttatac ttaaaagatt
    12001 tttatttaaa gcttatgata ctttaatttt tatggataat agcatagacc aaacccaatt
    12061 tagcgcacta aaaagtatca tgatgcattt agaaaattca tacaagcaaa tgatagccga
    12121 tcaaaaacca aataccacaa aaatttttaa tgagaccttt ttatctttac agtgccatta
    12181 tcaagcttta atggccacca tagatacaag aaaaaatcgt ctagcttcac ttgaagcaca
    12241 aatgaaaaac ttacaatctg aaataaatct taaaagcaat gcagccaatc cagatcctga
    12301 aaaacttaaa gtacaacaag aaagattagt caaattacaa gaagaagccg aatactatag
    12361 aacaacattg aaaagacttg atgctataag agaagatttt tataagaaaa attacaatat
    12421 cttcgaaaat gcctttaagc tttctcgaga aaaactcttt aagaaaattg tcacgggttt
    12481 aaatctatgt gcaactataa tggatgtcaa aatttggcgt ttgtctttaa aatcatcagg
    12541 agttaaaaat tcttatttta ctatgagtaa tatagaaaat tctttctgct ctctttcttt
    12601 tgcagaacat tatttaagtc gtttaaacaa atcagcttta aacccttttg atcacaaact
    12661 tttagtatac attcaaaaaa tcacaaaaga acaaagaaaa aaatttttag ttgtcacatc
    12721 gaatttagat ttattatgca aattaaagat tgaaaacttt tcacaaaatc cgtattattt
    12781 agtaaagtat gctcccaaaa aagtaaatta tcaatcttta atgcgtgata atacctttga
    12841 tatagtttat attgatgaaa aaaatgtttg ggaaaatgtt gccgatatta ttttgcaagg
    12901 aaagcatttt gacaaatcag gaaaaaccaa atttaaactg atttaagaca tagaaattta
    12961 agctaaatta agttataatt ccttgcctaa acagtttgtg gtatttaagt gatccaacac
    13021 atttttatta actgcaatcg tgtgatttac cgtgttctgt ggcatcgttt gagttttgaa
    13081 aaaagcaaga agttgcagcc tttaaaaatt acctagcggt tttctttgac tttttggggt
    13141 caatctttgt taaacggctg tttgggttta aaaggagata tataatgaaa ataatgattt
    13201 tgggtagtgg tgcaagagaa tattctattg ctttagcctt aaaaagagta gacaaaaatt
    13261 tagagtttta ttttgctcct ggaaatggcg ctaccgaaag tcttggaaca aatttaaacc
    13321 taaaagatcc agtggtttta gcaacctacg caaaagaaaa aggttttgat ctttgcatag
    13381 tagggaatga aagtttttta gctgaaggag ttgtggatat ttttaaacaa caaggacttg
    13441 ctatttttgg accaagcaaa gctgctgcaa tgcttgaaac ctcaaaatct tttatgaaaa
    13501 gttttcttaa aaaataccgt atcaaaacag ctaaattttt aaacacaaat gacattgaaa
    13561 aagcaaaaaa ttttatatat agtttaaccc ctcctatagt agtaaaagcc gatggacttt
    13621 gtgcaggaaa aggtgttatc atagctaaaa ctcacgaaga agctatagaa gaaaccgcta
    13681 aaatgcttag cggagaaagc tttggtgatg ctggaaaact agttgtgatt gaagaatttt
    13741 tagatggtta tgaattaagt atttttgcag tatgtgatgg taatgatttt gttttacttc
    13801 ctgtagcaca agatcacaaa aaattactcg ataatgatca agggccaaat accggtggaa
    13861 tgggtgctta tgcccctagt tctttggcca atgaaagctt acttagaaaa gttcaaaaag
    13921 atatcatctt gccaacttta gcaggcatga aaaaagaagg gacagaattt tgcggggttt
    13981 tatttatagg tgctatggtc gttggaaata aaccttatgt attagaattt aatgttcgct
    14041 ttggcgatcc tgaatgcgaa gttttaatgc ctttaatcga agatcctttg gagcttattt
    14101 tagctgccac tcaaagacgc ttaagacatg taaaaattaa aatcaaaaaa gaatttgcag
    14161 tatgcgttgt atgtgcgagt gaaaactatc cttacaaaag ctcaccaaaa agccaaatta
    14221 ttgtaaataa cattcctgaa aactctcata tttcttatgc tggagtaagc ttagaagatg
    14281 gtaaactaat ggccgatggt ggaagagttt tagtttgcgt tggcacagga aaaagcattg
    14341 aggaagctca aaaaaatgcc tataaacttt gtgataatgt aaatttcaaa ggaaaacaat
    14401 acagaaaaga tatcgctcat caggttctta aatgaaagaa aatttacaaa atcgcttaga
    14461 gcgcgaaaat ctaaaaatag caagctttgg aaaaagagtt ttagcttttt taattgatga
    14521 tatgattatt tctttgattg tatttatcat tttttacgat cgcttgattc tagcaaaaga
    14581 tttatttgaa atgactcaaa ttataggaaa tttttatctt ggtttcatct tacttcattt
    14641 tagttatcaa actattttta cttatcttta tggagcaagt ttaggaaaaa tattgtgtaa
    14701 aattatcatc ttagatgaaa atcttctaga caaacctaat ctaacccaaa gctgtatcag
    14761 atctgctgta agacaagtta gtgccatggc ttttatgctt ggatttgctt gggctttaag
    14821 taatgattta cgcaaagctt gggaggatta tttagcaagg acgatagtag tcgatgtggc
    14881 gtaaattttc cctattatta ggagctagca tagccttaaa tgcggcacaa gttgatattt
    14941 acgcccttga tgcaaaaaaa gaaggtgata tccttactgc aaataatgat gttattattt
    15001 tttctgattt ttatttcatc actgccaata aagcaattta taatgaaaaa actggagatg
    15061 ttgaactttt tggcgatgtt aatatcctaa gaggtcaaaa tgaaagatcg cattctgact
    15121 atgctaaaat caacctaaat tctaatcaag ccgattttag gaattttttc ttttctaata
    15181 ataatcttga agtatggttt caaagcaaaa caagtcatct aaacaataaa gtctttgaaa
    15241 gtaaaatttc agcagtttca agctgcaatg ttgaaaatcc tgactgggaa attcgttttt
    15301 caaaaggctg gcttaatcga gaaactaatt ttgtccatct ctataatgca aaattatatg
    15361 ttaaaaatac cccggttttt tatctgcctt attttggttt tagtgctgac actcatagac
    15421 aaagtggact tttaatccca aaaattgttt taaaaagtaa tgaaggctta tactatgaac
    15481 aacctattta tatagtcgct caagaaaatt gggatttaga acttgatcct caagttagaa
    15541 caaatcgtgg ttttggtctt tattcgactt taagatttct tgattctcca tattcagcag
    15601 gagagttaaa ttttggtgct tttagagaaa ataactccta ttttcacgat gaaaatttaa
    15661 aaaataaaac ccactacgga atagagctaa aatactcaag agatgatttg attaaatctt
    15721 tactcagcga taattttcaa gaaggtctat ggatagatgc aacttatctt aacgatgtag
    15781 attatttaaa tctcggcagc agagattatc gagatcttaa ctcgcttgta acctcgaaaa
    15841 ttaattattt tctagccgat gaaaacaatt tctatggagc ttacgcaagg tattatatcg
    15901 atacatctaa acttaataat aacacaacct tacaagaatt tccaagtttt caataccaca
    15961 gatttttaaa caatcttttt gatgaacgct tacgttattc atttgatgct tcatttcata
    16021 atttttaccg acctgctggt tcttatgcaa atgagctaaa tttagactta cctatctcgt
    16081 atcataatgc tttttttgga gattttttac actttacttt tacagaaagg ttttatgctt
    16141 cttttataaa ttatagcaac gatccccaaa gaaatcatga acattatttt agaaatattc
    16201 atgattttaa tctctatacc gatctttcca aagcttatga aaatttcttt cacactttga
    16261 atttagggat aaattatgtt ttaccaggtg caaaatcagg taaaatcaca caagattatc
    16321 ttgaagaatt cgataaagaa aatgaacata caaaccttta tgctgtgcaa tatttctaca
    16381 acaacgaagg acaaaaaaaa atcaaacaca gaatttcact tgattacctt aataaacaaa
    16441 atgagttcta tgaacttgaa aatcttttaa cttattattt taatgaaaac attaatctta
    16501 acagtgaagt actttattct tataagcaaa gtcgctttac caatgttatc agtcaaatag
    16561 aagtcaacac aaattcgaaa tttaactgga tgttttctca tgcttatcaa aataatgagt
    16621 atggaaaata cagctttatt ggcacaagag caaattatat tactacacct aattacaatt
    16681 tatttggtgg aatttggttt gatactcaaa gagcacatgc aaacatgtgg gaacttggct
    16741 atacttatca aagaaaatgc tggaattatt ccttaatgta tagagaaaga atcgatccac
    16801 aacttacaag cggtggtatc acggcaaaaa atcaaagtgg agtttatttt attttcaact
    16861 tctatccttt aggaggagta aaatacgatt tttctttagc agaaagtgaa aacaaaattt
    16921 aaaaaggatg aaatttgcta aatattttaa aaaattttac gaatttatta tctggtaaaa
    16981 aaggaaaaac aatgcaatac agtatagaaa ttaacaaaaa tacagaaata tttgatatag
    17041 ataaagttgc aaaacaagcc actggtgctg ttttaatgaa acaaggtaaa agcgttgttt
    17101 tagctacagt tgcaagagaa gaaaaacaag ttgaagaaga ttttttaccc ctaaccgttc
    17161 aatacatcga aaaaacttat gccgcaggaa aaattcctgg cggctatgtc aaaagagaaa
    17221 ccaaaccaag cgatgcagaa actttaacag cgcgcattat tgatagaagt ttacgccctc
    17281 tttttccaaa aggttatgct tatccaactc aaatcgtcgt aatggttctt tcagccgatc
    17341 ctaaagtgga tttgcaagta atgagcttaa atgctgcaag cgtagcactt tatcttagtg
    17401 atatacctat gaaagctcca gtatgtggtg ttcgcatagg aaggatagat ggaaatttta
    17461 tactcaaccc aaacaatgaa gagcttaaaa acagcactct agatctctat gtagcaggtg
    17521 taaaagatga gcttttaatg atagaaatga gagccttacc tgatcaaaag gaaaatgaaa
    17581 tctttattga agctccttac gctgatgttt taacccaaac cacttcacaa aatatgaatg
    17641 aacttaacga agatgaaatt ttagaggctt taaatttagc tcaaaaagct atattaaatg
    17701 ggtcaaatgc ttataaagaa gcctttagta aacacagaaa aaattctcaa atcgagttaa
    17761 aaaacgaaat tgaatatcct gaaattttag cttttgtaga aaataatttc caaaaacaaa
    17821 tcaaagaagc catcaaccaa atggcaaaaa gcgaaagagc aagtgaactt aataaaattg
    17881 ctaaagaaat tttaaacctt gaaatcgcta aagattggag tgaagaaagc attttaaata
    17941 ctttagccaa aatcaaacgc aaacttatcc gtgagcaaat tttagataaa ggcaaaagag
    18001 ctgatggtag aagtttaaac gaagtgcgtc ctatcagcat agaaaccaat atcttgccaa
    18061 atgctcatgg ctcatgtctt ttcactcgtg gacaaactca agccttagtt gttgcaacat
    18121 taggcggaga aaatgatgct caaatgatag atttacttac agaaaaaaat cctatcaacg
    18181 aacgctttat ggtaaattat aattttccag gcttttcagt aggagaagca agtcctatta
    18241 aagctccagg aagaagagaa ctaggacatg gaaatttagc taaaagagca ctctatccaa
    18301 gtgtggatga gaactatcct tatgtgatcc gcttagtcag tgaaatttta gaaagcaatg
    18361 gctcaagctc tatggcaaca gtttgcggtg ggtctttagc cttaaaagca gcaggggtgc
    18421 caagcttaaa acttgttgca ggcgtggcta tgggacttat ctttgaagat aacaaacatg
    18481 ccattttaac agatatcatg ggacttgaag atcatgatgg agatatggat tttaaagtag
    18541 caggaagtaa agatggtgtt actgctcttc aaatggatat aaaactaggc ggaatcgatc
    18601 aagaaacgct taaacaagct ttatatcaag ccaaagaagg aagaattcat atcctaaata
    18661 tcatggaaga agccgctaaa gaaatcgtag ttaatgaaga agtcttacct aaacttgaac
    18721 tttttagcgt cgatccttca aaaatcgttg atatcatagg tcaagctgga aaaaccatca
    18781 aagaaatcat agaaaaattt ggtgtttcta tagatttaga tcgcgaaaaa ggcgaagtaa
    18841 aaatagcagg caaccaaaat gaacaaatca aagctgcaaa agactatatt ataaatatca
    18901 caagctctca aaaaggaact aaaaaaaatt ctaaagatat atcaggcttt gaacttggac
    18961 aagaatttca aggtattgtt aaaaaaatcg ctccttttgg agcctttgta gaacttaaaa
    19021 atggcgttga tggtttattg cataattcaa aaattaaaaa tctcgatcta agtgaaaacc
    19081 aaagcttgaa agttaaaatc agtgaaatta aaaatggaaa aatttccgtg gatttgtgtg
    19141 agtgaatgaa tttttaactc acccttttaa accttttttt gataaagatt ctaaaatttt
    19201 aattttggga tcttttcctt ctatcaaatc aagacaagat ggcttttact atcaacaccc
    19261 aagaaatcgt ttttggccta tactagagac actttttgat gcaaaattag aaaatatcgc
    19321 aaaacaacaa gcctttttaa aagaaaaaaa tatcgctctt tgggatgtac ttcaaagttg
    19381 caagataaaa aattcagatg ataaaactat aagctatgca aaggccaatg atttaaacct
    19441 aatcctttct caagccaaaa tccaagccat ttttaccaca ggacaaagcg cttataaatt
    19501 ttttaccaaa tttcatcctc atttaaaagc catagcccta ccctcaactt ctcctgcaaa
    19561 tttaaatttt tcttttgaaa aacttttgca aagttatgaa atacttaaag attttataaa
    19621 ataatttttg attatatata caaaataccc tcgcaaacaa agaataatac ttacaaaaat
    19681 acaaataaaa tagtaaattt gtcacttagc atcacgaatg gcaattaaaa taacataacc
    19741 aaatcttgcc acaccatttt agttaacaaa gtagtaaaaa aacacatcat aatacgcaaa
    19801 aacataaaaa tccttaaatt tatgcagatc aaagcatatt ttaatctttt tatattaaaa
    19861 taactcaaaa tacgccaaaa taaaggagtt tgcatgcctt ttgtaaatat tcgcattact
    19921 aaagaaaatg aacaacctac aaaagaacaa aaacaagaac ttatcgcagg gataacagac
    19981 ttactcgcta aaatattaaa taaaaacaaa aactccactg tggtaattat cgatgaaatc
    20041 gacactgata attacgggtt tggcggaaaa agcatcaccc aagtaagaca agaaaaaagc
    20101 tagtttacat ctagcttttg agtattatcc ttaaattcaa attctactct tttagctcca
    20161 aaacctttag caatggcctc taaagtatct ttagcacttt tgtgaatttt gctttctaaa
    20221 ttttggataa gatttaaaga caaatcctta acctcatctt tagcttcttt tataagttta
    20281 tttttatcgc tttcactaaa gctaatcccc gtgctattga tggaatcagg tagcaaaaaa
    20341 ggtaaaaatt tggcattttt ttcatcataa aatttcatat ctatgatgct atgtttatat
    20401 ttacactccg gcatgataat tttataagca tcatctccca agcttaaaat atcaaaattt
    20461 ttatccctta aatcatataa aaaagtaatc tcaaattcaa aaatcaaagc aatctgcctt
    20521 tcactcaaag accagcctaa aatgcttttc caaattccat taaaagcact atctttttta
    20581 gtaacaatct ctttactaaa aacttgaaaa acacttaatt ctcctataga tttaagttgc
    20641 atgatatcgc taaagctttg tgtgcttttt tcttgtattt tagagctttt gtactgccta
    20701 aaaagcaccc caaataaaat cccaagcaaa atcactacta aaacaaataa aatcatttcc
    20761 attttaaacc tttctaaata tttataagcc ttgatttgaa aagatatatt ttctttcaaa
    20821 tgctaagaaa ataaacgcat tgacgataaa aatcaaacac acaaaagtaa aaacaaattc
    20881 cacgctaaaa ttcgaagcca taagccctcc accaaaagca ccacaaaaat ttcctaaaaa
    20941 ttgacaagtt tgattaaaac caaaaattac acttaaattt ttagcactca cacttttttt
    21001 aagcaaagca ttcacgcaag gcaaaagccc tccaagtcct atgcctataa gcaaacgtac
    21061 aaaaataagt gtatagacat tatttgccac agcttgcaaa taaaagcaaa ctccacaaaa
    21121 tatcaaagcc acaaaaataa tcttactagg ccctatttta tcagcgattt ttccaagttt
    21181 tgatgcgaaa aaaagattgc taatcccact tgcagccacc actatacccg cccaaagagc
    21241 taaatttcca ccttgatgaa tttgctcgac atagatactt aaaatcggca tcaccccaaa
    21301 agtaccaaac tgtatcacaa aagtggtgat aaaaagaacg ataataaggg ttttgctttc
    21361 cttaactttt tgagtatttt tctttgcttc tttttgaatt gttctctcat ggatgaaaaa
    21421 ataaatcgtt acaaaagaac aagcgatcaa aaaagccacc acatcaaaaa ccgcactaat
    21481 actaaaaaat tcagccacaa agccaccaaa caaaggtcca agtaaactcc cacttataga
    21541 agctgtagaa agagttccta aagcataagc cactttttct tttggtgcta tcacagcgat
    21601 aaacacaata gcagctgaag taaaacctga aattatccct gttaaacctc gcacaaaaac
    21661 cacttctaaa gcactatgag caaaactaag ccacaaagtt aaaaccgaca ttccaaaact
    21721 tgcacgaaga agcatatttt tatagccata ctttgcgccc aaaaaagccc ataaaggaga
    21781 aaaaacagcc ataaaaagcg gagtgatccc aaaagcaagc cctgagtaaa acgctatctc
    21841 actcgtatca acatatccta gttctttgat ataaaaaggc aaaattggag cgatttgact
    21901 aagccccata cttgtggtaa aaacaccaaa ccaacacaca agcaaagttt tattgaaatt
    21961 ttccatggat ttattgtatg atatttttta taatttttaa ttaaaactca aggataaaaa
    22021 tgaaaaaaat agtctttata tgcctaggca atatatgccg ttcacctatg gcagaattta
    22081 tcatgaaaga tcttgtcaaa aaagcaaatt tagaaaaaaa ttttttcata agcagtgcag
    22141 gaacttcagg agaacacgat ggagaaacga tgcactatgg cgccaagaac aagcttgcag
    22201 aatttaacat agaacacaaa aatttcacaa gcaaaaaact cactcaaaaa ctttgtgatg
    22261 aaaatgattt tttaatcacc atggacaatt ctaacttcaa aaatgtttta aaaaatttca
    22321 acaacactca aaacaaagtt ttaaaaatca ctgattttag ccccaatcta ggctacgatg
    22381 aagtgcctga tccttggtat agcgggaatt ttgatgaaac ttataaaatt ttatctctag
    22441 cttgtaaaaa tttgctagtt tttctatcaa aataaattaa aacaactata atttatttct
    22501 tgtttacttt ttaggcttat acttccaaat gaactgaaaa acattcataa gaaaaactcc
    22561 ttaaaattac acgcctagtt taagtccctt tagctaggct tttcttttag atgtttttat
    22621 ctttaggatg taaaattttt actatattta agtgcttctt aagaaaaaac tccaaattta
    22681 tatgctacaa ttacgatgtt ttattaattt ttaataagga gaattctcat gaaactagtt
    22741 aaacttagtt tagttgcagc tcttgctgca ggtgcttttt cagcagctaa cgctactccg
    22801 cttgaagaag tgatcaaaga tgttgatgta tctggagtat taagatacag atacgataca
    22861 ggtagatttg gaaaagattt tgatctaagt aacgtaacag caaatccaac agaaaatgct
    22921 ttaattaata gtaaacaaac tcataaatat agagcacaag ttaacctcag tgctgctata
    22981 gctgataatt ttaaagcttt tattcaactt gactacaact cacaagatgg tggctatggt
    23041 acaaatagta tcagcaatac aagtgatact ttaacagttc gtcagttata cctaacttat
    23101 accaatgagg atgttgctac aagcataatc gctggtaaac aacaactaaa cactatctgg
    23161 acagataatg atatcgatgg tttagtagga acaggtatta aagtagtaaa taacagcatc
    23221 gatggtttaa ctctagctgc ttttgcaatg gatagtttca atggatataa tgcagatatt
    23281 aatgctaaag gtgatggtga tgtaagcagt gctttaaatt gggataaaaa tatttatggt
    23341 gctgcagcta tcggttctta tgatattttt ggtggacaat tcaacccaca attatggtta
    23401 gcttatatga gtgataatgc atttttatat gctttagatc tagcttatag cacaagtatt
    23461 tttgatggaa tcaactggac tatcgaaggt gcttatttag gaaattctgt tgataatgaa
    23521 ctagaaaata aatttggcca aaatactgtt ggaaatggta acttctttgc tttaagaggt
    23581 actatagaag taaatggttg ggatgcaact cttggtggtt tatactacgg tgataaagat
    23641 aaatctactg taactgtaat cgaagatcaa ggtaaccttg gctctttact tgcaggtgag
    23701 gaaattttct atactgctgg ctcaaaatta aatggtgaca ttggtagaaa tatcttcggt
    23761 tttataacag ctggttatac tttcaacgaa acagttcgtg taggtgctga cttcgtatac
    23821 ggtggaacaa aaacacactc tactacttat ctaggtggag gagataaact tgaagcggtt
    23881 gcaagagtaa attataaata ctctccaaaa cttaacttct cagcattcta ctcttatgta
    23941 aatgttgatt caaataataa agtagaggga gaaggtgatc ataacactgt aagacttcaa
    24001 gctctttaca aattctaaga agctttaagc aaagtggagt aaaactccac ttttttatac
    24061 cttattttta aaacttaaat ttatataaaa tatctatctg aattattttt aaaagagatt
    24121 ttcccaagct aaaaagcttt aggaaaatta agacttaaac caattagcaa ttttttcaaa
    24181 aagccctttt tgctcttgat gcataccatc tttgatacca aaactttcac ttagcttttc
    24241 taaaagttct ctttgttcat cgtttaaaga atttggaaat ttgatagaaa tttgaacgat
    24301 ttgatttcct atacgagaac tatgaacatc ttttacccct tctttttcaa gaacaaatct
    24361 ttgcccatct ttagcaccct ttggtaaatt taaagtcgct tcaccacgta tagtaggtac
    24421 ttttatactt tgtcctaaga tagcttgagt aaaaaacact ggaaattcta tatatatatc
    24481 atcatcatcc ctgataaaag tatcatcttc agcagcaata atcttaacat acatatcccc
    24541 tctagcccca ttttttagaa tattaccttt agcattgaca cgaagtttca tacctgtatc
    24601 tacgccttca gggatattaa gctcgacgct atctttgctt tcattataac ctaaaccctt
    24661 acaatcgcta catttttcac tagctttttc tccacttcct tgacaatcag gacaagtttg
    24721 cgcaaaagta ataaaacctt gagaaactcc aacctgtccc ctacctttac attttggaca
    24781 agtttgaagt tttccatctt tagctcctgt tccattgcaa gttttacaag aacatttata
    24841 agtaaagtct atatttttct tacaaccaaa aactgcttct ttaaaactca attttaaatt
    24901 aactataaaa tctgaaggaa ttttctcatc acttgaactt tttctgcgat gcgatgacga
    24961 tccaaaaccc tctccaaaaa aactagaaaa tatatctcct aaatcttcaa aaccaccaaa
    25021 acttgagcta ctagaactaa atccacctcc ctttaaagcg tcttttccgt atctatcata
    25081 aatagctcgt ttttcatcat tgcttaaaac ctcataggct tcattaataa gcttgaattt
    25141 atcttctgct tctttatcac cttgatttct atcaggatgg tattttaaag ccatttttct
    25201 ataggctttt tttatagttt ctttatcagc actttgtgtg atttcaagaa tttcataata
    25261 acttatttcc acattattcc ttcaaaaaat ttaaaatttc a
//
LOCUS       DAPWAA010000020        24496 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.020, whole genome shotgun sequence.
ACCESSION   DAPWAA010000020 DAPWAA010000000
VERSION     DAPWAA010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24496
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.020"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..741
                     /locus_tag="RTF91_000749"
     CDS             <1..741
                     /locus_tag="RTF91_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HDZ4943657.1"
                     /translation="IKFHYFQNFYEDFKSQKFIFNHEHQSIFKKNTSQEITLLHPTRI
                     RRPKFVNSTHALAKIIHSIAHIEFNAINLALDASYRFKNLPLQFYHDWLEVTDEEIKH
                     FKLLNSVLEELGYKYGDFPVHDNLESALEVTKDSLSFRMGVVHRGLEAKGLDANPFVV
                     RKLQSSNHSIKSLLIEYLEIILNDEIKHVKKGDTWWKFANQNEYDFIKLCKTFKQFSL
                     AGKKLNTQARIKAGFSQEECEAIKKIYS"
     gene            complement(732..1460)
                     /gene="pssA"
                     /locus_tag="RTF91_000750"
     CDS             complement(732..1460)
                     /gene="pssA"
                     /locus_tag="RTF91_000750"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDZ4943658.1"
                     /translation="MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYMALIYIIL
                     SLICDGLDGRVARLTNSTSKFGVEFDSLADLVAFGVAPAVLFYMAIGYDFGKLGSLIT
                     AFFAVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSAIWTYAFISYDFLKPYGIVF
                     LVLQAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASL
                     YVLYGIIRVLYTIVISKFKIKNQE"
     gene            complement(1470..2087)
                     /locus_tag="RTF91_000751"
     CDS             complement(1470..2087)
                     /locus_tag="RTF91_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDZ4943659.1"
                     /translation="MRDFITKDGYLSLGILSLIFIFVWIFYSFSVLLLLLIIFCIFLF
                     RSPKRNLVCSDEKAIFAPIDGRVTKIENINHKDLGECIEITIKNAFYDAGNFNTPFAM
                     SIIDIRLRHGLFLCNELKSAKMMNERAFILARVKDDKIIALRIYVGSFDRKLKLDNIS
                     HDLKAGDRMGFLINGSISLLLPKDTRIHIGLNDEIKAGSLLGYFA"
     gene            complement(2084..4021)
                     /gene="ftsH"
                     /locus_tag="RTF91_000752"
     CDS             complement(2084..4021)
                     /gene="ftsH"
                     /locus_tag="RTF91_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDZ4943660.1"
                     /translation="MNNNTPNNKGNPQGNNFFNKNPIFIFAIFAIVMIIIFKGFFDGN
                     GSFSGALNGNEVSRNVPYSELKKLIESGQINQVSIGQTTIKAISSSHNTIYTAKKVND
                     PELVSLLDSKNIAYGAYSETNWFTDILFSWVLPVFIFFGIWMFLASRMQKNMGSSILG
                     IGSSKKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVG
                     PPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFI
                     DEIDAIGKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAA
                     LLRPGRFDRQVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANI
                     INEAALLAGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIA
                     ETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVF
                     IGEISTGASNDLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTIKDYSEKM
                     AESLDDYVKKTLDERYKDVKNTLNTYKGAIETMVAALYEKETIEGAKVREIIKEFEEQ
                     NNLSTRLQELEEVKIEVKVEE"
     gene            complement(4014..4871)
                     /locus_tag="RTF91_000753"
     CDS             complement(4014..4871)
                     /locus_tag="RTF91_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDZ4943661.1"
                     /translation="MQKKYYELFFIVEEQYKNLFLDFAFDLGVEAIEEKDNGIYIRSH
                     ESLDELSWALEMFAQKLTLTFNLNHKIISNLTLVEKENKDWIQEYKKGIKPVLVDNVY
                     IHTTWQEEKNNCINIKINPALAFGSGHHESTYSCVKFLQKFSKDKLRALDLGCGSGIL
                     GIIMAKFGCNVEICDTDELAIDSSLENAKLNSVNFYKTWYGSIDKANGLYNLIVANII
                     ADVILVLEKDIKNHLEDNAILILSGILDKYSTRIKEKFLDLELIDELQINEWCSFVYK
                     NNKKRISNE"
     gene            complement(4893..5291)
                     /locus_tag="RTF91_000754"
     CDS             complement(4893..5291)
                     /locus_tag="RTF91_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HDZ4943662.1"
                     /translation="MKLLVVDDSSTMRRIIRNTLTRLGHDDVLEAEHGVEAWDLLTKN
                     EDIKVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNY
                     IVKPFTPQVLKEKLEDVLGTGSGSGEVAAE"
     gene            complement(5408..6295)
                     /locus_tag="RTF91_000755"
     CDS             complement(5408..6295)
                     /locus_tag="RTF91_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDZ4943663.1"
                     /translation="MYIKDIQRFEDNRYRARAYMSYILTRNLPNKLPDIHLETIKTAL
                     DKIAHEVVVFDALYILDISGMQIENAISLNKAHEIGQNEDRSTRSYFYRAVKLRRCVL
                     SDPYPSVLNNELCVTASMPIYDDKNNLLFVVCIDIKLEDILKIIQAGKFEFVFAQFSH
                     FVYFCFALVLFVITCFLFQKGFFSLFDNQTIGIEHMFESTIAITLALAIFDLVKTLIE
                     QEVLGRTKKEEGGIQKTMVRFLGSIIIALAIEALMLVFKLAIGDLSQMVYAIYLIGGI
                     SLLLLGLSVYLFTVKYKNE"
     gene            complement(6295..8064)
                     /gene="pglF"
                     /locus_tag="RTF91_000756"
     CDS             complement(6295..8064)
                     /gene="pglF"
                     /locus_tag="RTF91_000756"
                     /EC_number="4.2.1.135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (configuration-retaining)"
                     /protein_id="HDZ4943664.1"
                     /translation="MIFHKSKRLAFFLTSDIILILLSVYLAFSLRFSGDIPSIFYHGM
                     IVSAIILLILKLAFLFVFRIYKVAWRFFSLNEARKIFIALVLAELCFLVIFYFFSDFF
                     NPFPRSAIVIDFVLSYMFIGTLRISKRMLVDFKPSKIKEETPCIVVGATSKALHLLKG
                     AKEGSLGLFPVGVIDARKELIGTYCDKFVVEEKEKIKSYVDQGVKTAIIALRLEQEEL
                     KKLFEELIAYGICDVKIFSFTRNEARDISIEDLLARKPKDLDDSAVAAFLKDKVVLVS
                     GAGGTIGSELCKQCIKFGAKHLIMVDHSEYNLYKINDDLNLYKEQITPILLSILDKQS
                     LDEVLKTYKPELILHAAAYKHVPLCEKNPHSAVVNNILGTKILCDSAKENKVAKFVMI
                     STDKAVRPTNIMGCTKRVCELYTLSMSDENFEVACVRFGNVLGSSGSVIPKFKAQISN
                     NEPLTLTHPDIVRYFMLVAEAVQLVLQAGAIAKGGELFVLDMGKPVKIIDLAKKMLLL
                     SNRNDLEIKITGLRKGEKLYEELLIDENDAKTQYESIFVAKNNKVDLDWLNEEIKKLQ
                     TCEDISGALLKIVPEFKHNKEGV"
     gene            complement(8066..9226)
                     /gene="pglE"
                     /locus_tag="RTF91_000757"
     CDS             complement(8066..9226)
                     /gene="pglE"
                     /locus_tag="RTF91_000757"
                     /EC_number="2.6.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine transaminase"
                     /protein_id="HDZ4943665.1"
                     /translation="MRFFLSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQNVKDY
                     SKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKARPVFIDCD
                     ETYNIDVKLLKLAIKECEKKPKALILTYLYGNAAKMDEIVEICKENDIVLIEDAAEAL
                     GSFYKDKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLH
                     YEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKRKIYEWYKEFLGDHFSFLDELENS
                     RSNRWLSTALIDFDKNELNACQKDISISQKNIALYPKISKLIEDLQNEQIETRPLWKA
                     MHTQEVFKGAKAYLNGNSELFFQKGICLPSGTVMSKDDVYEISKLILKSIKA"
     gene            complement(9319..9909)
                     /gene="pglD"
                     /locus_tag="RTF91_000758"
     CDS             complement(9319..9909)
                     /gene="pglD"
                     /locus_tag="RTF91_000758"
                     /EC_number="2.3.1.203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine N-acetyltransferase"
                     /protein_id="HDZ4943666.1"
                     /translation="MARTEKIYIYGTGGHGLVCEDVAKNMGYKECIFLDDFKGMKFES
                     TLPKYDIFIAIGNNEIRKKIYQKISKNGFKVVNLIHKSALISSSASVAENAGVLIMPY
                     VVVNAKAKIEKGVILNTSSVIEHECVVGEFSHVSVGAKCAGNVKIGKNCFLGINSCVL
                     PNLSLADDSILGGGAALVKSQDEKGVFVGVPAKRKI"
     gene            complement(9896..10498)
                     /gene="pglC"
                     /locus_tag="RTF91_000759"
     CDS             complement(9896..10498)
                     /gene="pglC"
                     /locus_tag="RTF91_000759"
                     /EC_number="2.7.8.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl phosphate
                     N,N'-diacetylbacillosamine 1-phosphate transferase"
                     /protein_id="HDZ4943667.1"
                     /translation="MYEKFLKRIFDFILALVLLVFFSPVILIIVLLLKLTQGSVIFTQ
                     NRPGLDEKIFKIYKFKTMSDERDENGELLSDELRLKAFGKIVRSLSLDELLQLLNVLK
                     GDMSFVGPRPLLVEYLSLYNEEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
                     KNISFLLDLKIIFLTALKVLKRSGVNKEGHVTTEKFNGKN"
     gene            complement(10491..11621)
                     /gene="pglA"
                     /locus_tag="RTF91_000760"
     CDS             complement(10491..11621)
                     /gene="pglA"
                     /locus_tag="RTF91_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     alpha-1,3-N-acetylgalactosaminyltransferase"
                     /protein_id="HDZ4943668.1"
                     /translation="MRVGFLSHAGASIYHFRMPIIKALKDRKDEVFVIVPQDEYTQKL
                     RDLGLKVIVYEFSRASLNPFVVLKNFFYLVKVLKKLNLDLIQSAAHKSNIFGILAAKW
                     VKIPYRFALVEGLGSFYIEQGFKANLVRFAINNLYKLSFKFAHQFVFVNESNAKFMRN
                     LGLKENKICVIKSVGINLKKFFPIYIESEKKELFWKNLNIDKKPIVLMIARALWHKGI
                     KEFYESATMLKDKANFVLVGGRDDNLSCASLEFLNSGKVHYFGSRSDIVELLQNCDIF
                     VLPSYKEGFPVSVLEAKACGKAIVVSDCEGCVEAISNAYDGLWVKTKDTKDLSEKILL
                     LLEDEKLRLNLGKNAAKDALQYDENIIAQRYLKLYDRVVKNV"
     gene            complement(11631..13772)
                     /locus_tag="RTF91_000761"
     CDS             complement(11631..13772)
                     /locus_tag="RTF91_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-binding protein"
                     /protein_id="HDZ4943669.1"
                     /translation="MLKKEYLKNPYLILGLMILFAYAFSVFCRLYWIWWASEFSEYFF
                     NNQLMIISNDGYAFAEGARDMIAGFHQPNDLSYYGSSLSTFTYWLYKITPFSFESIIL
                     YMSTFLSSLVVIPIILLANEYKRPLMGFVAALLASIANSYYNRTMSGYYDTDMLVIVL
                     PMFILFFMVRMILKKDFFLVIVLPLFIGIYLWWYPSSYTLNVALIGLFLIYTLIFHRK
                     EKIFYIAVILASLALSNIAWFYQSAIIVILFALFALEEKRLNFMIIGIFGVATLVFLI
                     LSGGVDPILYQLKFYIFRSDESVNLAQGFMYFNVNQTIQEVENVDFSEFMRRISGSEI
                     VFLFSLLGFAWLLRKHKSMIMALPILVLGFLALKGGLRFTIYSVPIMALGFGFLLSEF
                     KIIMVKKYNQSISNVCIIFATVLTLTPVFVHIYNYKAPTVFSQNEVSLLNQLKSIANR
                     EDYVVTWWDYGYPVRYYSDVKTLVDGGKHLGKDSFFPSFVLSKDEQAVANMARLSVEY
                     TEKSFYAPQNDILKTDILRAMMKDYNQSNVDLFLASLSKPNFKIDTPKTRDIYLYMPA
                     RMSLIFSTVASFSFINLDTGVLDKPFIFSTAYPFDVKNGEIYLSNGVVLSDDFRSFKI
                     GGSVISVNSIVEINSIKQGEYKITPIDDKAQFYIFYLKDSAIPYAQFILMDKTMFNSA
                     YVQMFFLGNYDKNLFDLVINSRDAKIFKLKI"
     gene            complement(13776..14873)
                     /gene="pglJ"
                     /locus_tag="RTF91_000762"
     CDS             complement(13776..14873)
                     /gene="pglJ"
                     /locus_tag="RTF91_000762"
                     /EC_number="2.4.1.291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylgalactosamine-N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     4-alpha-N-acetylgalactosaminyltransferase"
                     /protein_id="HDZ4943670.1"
                     /translation="MQKLGIFIYSLGSGGAERVVATLLPILSLKFEVHLILMNDKISY
                     EIPECQIHFLECSKPSENPILKFLKLPFLALKYKKLCKDLDINTEFVFLNRPNYIALI
                     ARMFGNKTRLVINECTTPSVMYAKNSFNSLANKFLISLLYPKADLILPNSKGNLEDLV
                     ENFNINPKKCEILYNAIDLESIEQKALEDIALKDKFILSVGRLDKGKNHALLIRAYAR
                     LKTDLKLVILGEGVLKDELLLLIKDLNLEEKVLLLGFDNNPYKYMAKCEFFAFASVFE
                     GFSNVLIESLACGCAVVCTDHKSGARELFGDDEFGLLVEVDNENSMFKGLKTMLEDDK
                     LRKAYKNKAKTRARVFDKVKIARDALKYLLG"
     gene            complement(14861..15790)
                     /gene="pglI"
                     /locus_tag="RTF91_000763"
     CDS             complement(14861..15790)
                     /gene="pglI"
                     /locus_tag="RTF91_000763"
                     /EC_number="2.4.1.293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc(5)-diNAcBac-PP-undecaprenol
                     beta-1,3-glucosyltransferase"
                     /protein_id="HDZ4943671.1"
                     /translation="MPKLSVIVPTFNRQILLEKAIKSIQNQDFKDLEIIVSDDNSSDD
                     TKSVVQNLQKDDDRIKYFLNQNYKQGPNGNKNNGLDQANGEFITFLDDDDELLAQALS
                     TLMQKVNEGYAHVFGNCLIEKEGNLSNEFSGKGLDKDTEISKKDFLMAKFSGEFFSIF
                     KKSLLENKRFNEEFYGNEATLWVNLYKEKSFYIHKAFRIYRIFNQDSVTLGASKNAHR
                     VYLGYLELAKILENELKMTGDKDYKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSI
                     QINTPALILLILSIIPNNMIEKLSKIRVALCRN"
     gene            complement(15783..16862)
                     /locus_tag="RTF91_000764"
     CDS             complement(15783..16862)
                     /locus_tag="RTF91_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDZ4943672.1"
                     /translation="MMKINFIIATLNSGGAERVLVTLANTFCKEHEVSIIKFHSGESF
                     YKLENEVEVVTLEQFRFDTLYHKIASRFKKFFALRRALKESKADVFISFLDTTNIACI
                     VAKIGFKTPLIISEHSNKAYLKPKIWRFLRRVSYPFCDALSVLGSSDRAYYERFVKRV
                     KLLLNPCHFSDEISFNSSFEKENLVLFIGRLDHNKNPVMFLKAIAHLDKNLQENYKFV
                     IAGDGELRQELEYKVKSLGIKVEFLGRVENVKALYEKAKVLCLCSFVEGLPTVLIESL
                     YFEVCRISSSYYNGAKDLIKDNYDGLLVDCGDEVALAKKLELVLNNENFRKELANNAK
                     QRCKDFEISHIKEEWLKLIAEVKNA"
     gene            complement(16859..18553)
                     /gene="pglK"
                     /locus_tag="RTF91_000765"
     CDS             complement(16859..18553)
                     /gene="pglK"
                     /locus_tag="RTF91_000765"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type lipopolysaccharide transporter PglK"
                     /protein_id="HDZ4943673.1"
                     /translation="MLKKLFFILSKEDKKFLFFLLIFSVFVSFIETFAISLMMPFITL
                     ASDFSYFDRNQYLISLKEYLNIPVFEIIVYFGVGLIVFYVLRALLNAYYFHLLARFSK
                     GRYHKIAYKVFSKFLNINYEKFTQKNQSEILKSITGEVYNLSTMISSFLLLMSEIFVV
                     FLLYVLMLLINYKITLFLSIFIVLNAFILVKILSPIIKKAGLRREEAMKNFFEILNTN
                     LNNFKFIKLKTKEDGVLSLFKAQSEAFSKANIINESVAAVPRIYLESIGFCVLVFIVV
                     FLVLKNESDISGILSTISIFVLALYRLMPSANRIITSYHDLLYYHSSLDIIYQNLKQE
                     EENLGEEKLSFKQELKIRNLSFGYEGKKHLFKNLNLSIKKGEKIAFIGESGCGKSTLV
                     DLIIGLLKPKEGQILVDNQKLNANNAKDYRQKIGYIPQNIYLFNDSIAKNITFGDKID
                     EEKLNRVIKQANLEHFIKNLPQGVQTKVGDGGSNLSGGQKQRIAIARALYLEPEILVL
                     DEATSALDTQSEAKIMDEIYKISKDKTMIIIAHRLSTITQCDKVYRLEHGRLKEGK"
     gene            complement(18547..19533)
                     /gene="galE"
                     /locus_tag="RTF91_000766"
     CDS             complement(18547..19533)
                     /gene="galE"
                     /locus_tag="RTF91_000766"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDZ4943674.1"
                     /translation="MKILISGGAGYIGSHTLRQFLKTSHEIYVLDNLSKGSKIAIEDL
                     RKIRDFKFFEQDLSDFQGVKTLFEREKFDTIVHFAASIEVFESMQNPLKYYINNTVNT
                     TNLIKTCLQTGVNNFIFSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDA
                     SMANPEFKHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDY
                     DTKDGTCIRDFIHVDDISSAHLAALDYLQDNESNVFNVGYGHGFSVKEVIEAMKKVSG
                     VDFKVELTSRRAGDPSVLISDANKIRNLTSWQPKYDDLELICKSAFDWEKQC"
     gene            complement(19608..20402)
                     /locus_tag="RTF91_000767"
     CDS             complement(19608..20402)
                     /locus_tag="RTF91_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDZ4943675.1"
                     /translation="MTKNEGYICVFDCESVPDVELIRKTLDFKGSDLEVSLKALQWQK
                     EQSGSEFLPLPYHKIISICAVLSNNFGKFIKVNKIDGQDEKEMIFNFFNFIENYEPKL
                     VSFNGKNFDMPVLVLRALKYNIKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGANG
                     RGVKLDMICSMVGLPGKYDVHGDEVMKLFYQNEFEKIHEYCESDVLNTYMLFLKYELI
                     KGNVSEEDYIHFLSYMRDFLCAKKANHSYVEVFVKACESEISKFQV"
     gene            20468..21502
                     /gene="waaC"
                     /locus_tag="RTF91_000768"
     CDS             20468..21502
                     /gene="waaC"
                     /locus_tag="RTF91_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HDZ4943676.1"
                     /translation="MKIAIVRLSALGDIIQSAVTLQFIKNFKKDIEIHWFVDEKFEGI
                     LKNHPLIDKLYALPLKEKKFLKSLKILLEARKNNYNAVIDLQGLMKSAIVSRILSRNN
                     FGFDKNSLKESFAHNFYNQKLELDYNENVFVRYLSLVSFMLNADFNAKNLAFKQDIFN
                     VDENLKQLLSNKLKLNENEKNILIHVGSSEENKIYPKTKLAILCKLLINEFQKAKIWL
                     AWGNVKEYEFAKEVLNLSGIDETHVELAPKFNLEELIAFTKMMDLVIGNDSGPTHLAF
                     ALNKASITIFGATPSCRNAFQTHINKIIDAGKKIQNAKHIDKSDFCITRIEEEDIFKL
                     AKGLLDEKLR"
     gene            21486..22373
                     /locus_tag="RTF91_000769"
     CDS             21486..22373
                     /locus_tag="RTF91_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HDZ4943677.1"
                     /translation="MKSCDRLYLSLYYILKFFVHFMPDCILHFLALIVARITFYLNKK
                     HRKIIDTNLQICFPQYTQKERNKLSLKIYENFAQFGIDCLQNQNTTKEKILNKVKFIN
                     ENFLTDALALKRPIIFATAHYGNWEILSLTYAAKYGAISIVGKKLKSEVMYEILSQKR
                     TQFDIELIDKKGGIRQMLSALKKGRTLGILTDQDCTDSESVKLRFFNKEVNYQMGASF
                     IAQRSNALIIPVYVYKEDNKFCIEFFKAKDSQNASLEELTFYQAQSCEEMIKKRPWEY
                     FFFHRRFASYDEEIYKDAK"
     gene            22370..23920
                     /locus_tag="RTF91_000770"
     CDS             22370..23920
                     /locus_tag="RTF91_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDZ4943678.1"
                     /translation="MNLKQISVIIIVKNAEQTLFECLTSLKDFDEIILLNNESSDNTL
                     KITNEFKKDFTNLHIYHSAFIGFGALKNLALSYAKNDWILSIDADEVLENECISELKN
                     LELQKENIIVLSRKNLYKGEWIKACGWWPDYVLRIFNKNFTRFNDNLVHESLILPNDT
                     KKVHLKNGLRHYAFRDISHLIDKMQHYSSLWAKQNIHKKSGVLKANLRAFWTFFRNYF
                     LKSGFLYGYKGFIISICNALGAFFKYMKLYELQRQKPKTCALIITTYNQKERLKLVLD
                     SVKNLAFLPNEVLIADDGSKEDTAKLIQEYQKDFPCPLKHIWQEDDGFRLSKSRNKAI
                     KNSLSEYIIVIDGDMILEKDFIKEHLEFAQRRLFLQGSRVILNKKESEKILKNDDYRL
                     AFNKKDFKSYKNSFLAKMLYIFSKKDEKVFKKTALIKGIRGCNMSFFKADFDELDGFN
                     ENFIGWGREDSEFAARFLFNKGIFRRLKFKAIAYHIYHEENSKKMFESNHQIYLDTIQ
                     NKKISWLG"
     gene            23924..>24496
                     /locus_tag="RTF91_000771"
     CDS             23924..>24496
                     /locus_tag="RTF91_000771"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943679.1"
                     /translation="MRIQLKEYIKNHIYFGLLFRIKINNKIMKILKPNNKFYKIQIND
                     KKYKKTVAIHFSAGLGDYLMFRPFLKEVRNYYKNYHISIIGEQSFKDLCLEYDRDCID
                     EFIYFKQNMGFNAYVMPNINYDILISAFHKLHENTENNVNCIQAKEKICLVYGCSELS
                     FNDRERIVNTVFTKAIYLKNQEDFQALHYKE"
BASE COUNT         8955 a         4346 c         2873 g         8322 t
ORIGIN      
        1 ataaaattcc attattttca aaatttttat gaagacttta aaagtcaaaa atttattttc
       61 aatcacgaac atcaaagcat tttcaaaaaa aatacatcac aagaaattac tttgctccat
      121 cccacacgca taagaaggcc taaatttgtc aattcaactc atgcacttgc taaaataatt
      181 cactctattg ctcatataga atttaatgca attaacctag ctttggatgc aagttatcgt
      241 tttaaaaatc tacctttgca attttatcac gattggttgg aagtgacaga cgaagaaatt
      301 aaacatttca aacttttaaa ttcggtactt gaagaacttg gttacaaata cggagatttt
      361 ccagtccatg ataatttaga atctgcccta gaagttacaa aagattcttt aagctttaga
      421 atgggtgtag ttcatagagg cttagaagcc aaaggacttg atgcaaatcc ctttgttgtt
      481 cgaaaacttc aaagctctaa tcattccatt aaaagtcttt taatagaata tcttgaaatt
      541 atacttaatg atgaaataaa acatgttaaa aaaggagata cttggtggaa atttgcaaac
      601 caaaatgaat atgattttat aaagctttgc aaaacattta aacagttctc ccttgcagga
      661 aaaaaactta acactcaagc aagaataaaa gcgggtttca gtcaagaaga atgcgaagcc
      721 attaaaaaaa tttactcttg attttttatt ttaaattttg aaataacaat agtatataaa
      781 acacgaataa ttccataaag cacatataag cttgccaaaa ttactaaact ttcaagtgga
      841 taaagatata aaaatgaaaa tataataatt aaaataatta aaacttttaa aacactagaa
      901 cgattaaaat caagcttttt aaaacttgga tagcgtatat tgctcaccat caaaagccct
      961 aaaattgctt gaaggactaa aaaaactata ccataaggct ttaaaaaatc ataactgata
     1021 aaagcataag tccatattgc acttacaact gctgcagtgg gtataggaag gcctataaaa
     1081 acagagggtt cataagtacc tgtagtaaca ttaaatctag ccaagcgaat agccccaaaa
     1141 actgcaaaaa aagctgtaat caaagatcca agttttccaa aatcataacc tatagccata
     1201 taaaaaagaa ctgctggagc aaccccaaaa gctactaaat cagctaaaga atcaaattct
     1261 actccaaatt ttgaagtaga atttgtaagt cttgcaacac ggccatcaag cccatcacaa
     1321 atcaaagaca aaataatata aatcaaggcc atataataat ttccatgtat tgaagctata
     1381 atggaaataa cccctaaaaa agctgaagca gctgtaaaaa gattgggtag aatataaatc
     1441 agttgtggtc tattattcat tatttttcct tacgcaaaat aacctagtaa cgaacctgct
     1501 ttaatttcat cgtttaaacc tatgtgaatt ctcgtatctt ttggtaaaag taaacttata
     1561 gaaccattga ttaaaaaacc cattctatcc cctgctttta aatcatgaga aatattatca
     1621 agctttaatt ttctatcaaa agaacctaca taaattcgca aagctattat tttatcgtct
     1681 ttaactcttg ctaaaataaa ggctcgttca ttcatcatct ttgcagattt taattcatta
     1741 cacaaaaaaa gtccgtgtcg caaacgaata tctattatag acatcgcaaa aggtgtgtta
     1801 aaatttccag catcataaaa agcattttta atagtaattt caatacactc acctaaatct
     1861 ttatgattaa tattttctat tttagtaacc ctgccatcta taggtgcaaa aatagccttt
     1921 tcatcgctgc aaacaagatt tcttttaggc gatctaaaaa gaaaaataca aaatataatt
     1981 aatagcaata ataaaacaga aaaagaataa aaaatccata caaaaataaa aattaagctc
     2041 aaaataccaa gacttaaata tccatctttt gtaataaaat ctctcattct tctactttaa
     2101 cttcaatttt aacttcttca agctcttgta aacgtgttga aaggttgttt tgttcctcaa
     2161 actctttaat aatctcacgt actttagcac cttctatagt ctctttctca taaagagctg
     2221 caaccatagt ctcaatcgcc cctttgtaag tatttaaagt atttttaaca tccttatagc
     2281 gctcatccag ggttttcttt acataatcat ctaaagattc tgccattttt tcagaataat
     2341 cttttatagt ttgtccgcca cttaaaaaag tatttctttg tttttcaagc accataagcc
     2401 ctgcaatttc actcatacca tacatagaaa tcatagcttt tatgatatca gtcgcccttt
     2461 ctaaatcatt gcttgcaccg gttgaaattt cacctataaa tacttcctca gctgcacggc
     2521 cacctaaaag cacatccact tcagcaatga gctcatgctt ttgcattaaa aatttatttt
     2581 cttcgggggt atttaaagta taacctaaag ctgcaagtcc acgcggaatt acagaaacct
     2641 tgcttacacg ttttgcacct ttagtggttt cagcaattaa agcatgacca cactcatgat
     2701 aagtaacaat tttcttttct ttttcattga tacgacgtga tttcttctca agtcctgcta
     2761 tagccctttc aacagcttca actaaatcat tttgttctac atatttttta gaatctctac
     2821 ccgccaaaag tgctgcttcg ttgataatat ttgcaagatc agctcctgca agtcctgcag
     2881 ttaaacgtgc tatatcttct actttaacct ttggggaaat tttaacatct ttcatatgca
     2941 cctttaaaat atcacatcta cctttgaaat caggcttatc gactaaaact tgtctatcaa
     3001 atcttcctgg ccttaaaagt gctgcatcta aaacttcagg gcgatttgtt gctgccaaaa
     3061 caattaccgg agaactctct gttccaaaac catccatttc agctaaaagc tgatttaaag
     3121 tttgctctct ctcatcattc ccacccatca taccacttgc agcacgactt ttacctatag
     3181 catctatttc atcaataaaa acaatagcag gagcttcttt ttttgcattt tcaaataaat
     3241 ccctcacacg agaagctccc acacctacga acatttctat aaaagatgaa cccgaaacac
     3301 taaaaaacgg tacatcagcc tcacctgcaa ccgcttttgc aagtaaagtt tttcctgtac
     3361 ctggaggtcc aacaagtaaa agtccttttg gaatttttgc ccctaattta atatatcttt
     3421 caggatattt taaaaaatct acaatttctt ttacttcctc tttagcctct tcaacaccag
     3481 ctacatcact aaattttact ttaggttttt ctgaatttac aagtttctta gaacttccta
     3541 tgcccaatat agaactcccc atattttttt gcatacgact tgctaaaaac atccaaatac
     3601 caaagaaaat aaacactggt aaaacccatg aaaaaagtat atctgtaaac caatttgttt
     3661 cagaatacgc accataagcg atatttttac tatctagcaa acttacaagc tcaggatcat
     3721 tgactttttt tgctgtataa atagtattat gagaacttga aattgcttta attgttgttt
     3781 ggcctatgct aacttgattg atttgtccac tttcaataag ctttttcagc tcagaataag
     3841 gaacatttct acttacttca ttaccattta atgctccact aaaagaacca ttaccatcaa
     3901 aaaatccttt aaaaataatt atcattacaa ttgcaaaaat tgcaaaaata aaaataggat
     3961 ttttattaaa aaaattattt ccctggggat tacccttgtt atttggggta ttattattca
     4021 ttacttatcc tttttttatt atttttatat acaaaactac accactcatt gatttgtaac
     4081 tcatcaataa gttctaaatc tagaaatttt tctttaattc ttgttgaata tttatctaaa
     4141 attcctgata aaataagtat agcattatct tctaaatggt ttttaatatc tttttctaaa
     4201 actaaaatca catctgcaat gatatttgca acaattaaat tgtataaacc atttgcttta
     4261 tctatagatc cataccaagt cttataaaaa ttaacactat ttaactttgc attttctaaa
     4321 gaactatcaa tggccaactc atcagtatcg caaatttcga cattgcaacc aaattttgcc
     4381 ataataatac ccaaaattcc gctaccacaa ccaagatcca aagctcttaa tttatcttta
     4441 gaaaattttt gtaaaaattt tacacaagaa tatgtgcttt catgatgtcc tgaaccaaaa
     4501 gctaaagctg gattaatctt tatatttata caattatttt tttcttcttg ccaagtagta
     4561 tggatataaa cattatccac taaaacaggt tttatgcctt ttttatattc ttgtatccag
     4621 tccttatttt ccttttctac aagagttaaa ttagaaataa ttttatggtt taaattgaaa
     4681 gtaagtgtaa gtttttgagc aaacatttca agcgcccatg aaagttcatc taaactctca
     4741 tgggatctaa tataaatgcc attatccttc tcttctatag cttccacacc caaatcaaaa
     4801 gcaaaatcaa gaaataaatt tttatattgt tcttctacaa taaagaacaa ttcgtaatat
     4861 tttttttgca tttaaaattt caaaaattgg ccttactcag ctgcaacttc tccactccca
     4921 ctccctgttc ctaaaacatc ttcaagtttt tcttttaaaa cttgtggagt aaaaggtttc
     4981 acaatatagt tatttacccc agcttttaag gcagtgatca cttcagcttt tccaccctca
     5041 gttgtaacca taataatagg catatcttcg tatttttttt ctgctcttac tttttttact
     5101 agttccaaac cattcatttc tggcatattc caatctgtaa ttaaaacttt tatatcttca
     5161 tttttagtta ataaatccca agcttcaaca ccatgctcag cttctaaaac atcgtcatgt
     5221 ccaagtcttg ttagagtatt tctaataatc cttctcatag tagaactgtc gtcaacaact
     5281 aacaatttca caatttcatc ctttcaaagt ttttatattt tatactttac cccttttagc
     5341 ctaataagct aaaaatttta taaagaacga cattatatca tcttttactt aaatttttac
     5401 tcaaatatta ttcattttta tatttaactg taaataaata tacacttaag cccaaaagaa
     5461 gcaagctgat tccgccgata agataaatag cgtaaaccat ctgtgaaaga tcgccaatag
     5521 caagtttaaa cactaacatc aaggcttcta tagctaaagc aatgataata gaacctaaaa
     5581 atctcaccat agttttttga atgccgcctt cttctttttt cgttctccct aatacttctt
     5641 gttcaattaa agtttttact aaatcaaaaa ttgccaaggc taaagttata gcaatagtac
     5701 tttcaaacat atgttctata cctatagttt gattatcaaa aagactgaaa aaaccttttt
     5761 gaaataaaaa acaagtaatc acaaataaaa ccaaagcaaa acaaaaataa acaaaatgac
     5821 taaactgagc aaaaacaaac tcaaattttc ccgcttgaat aatttttaaa atatcttcaa
     5881 gttttatatc aatacaaaca acaaaaagca agttattttt atcatcataa ataggcatag
     5941 aagctgttac acaaagctca ttgtttaaaa ccgaaggata aggatcactt aaaacacatc
     6001 gtcttaattt aaccgctcta taaaaataag aacgagtgct tctatcttca ttctgcccta
     6061 tttcatgagc tttatttaaa gaaatagcat tttctatttg catacctgaa atatctaaaa
     6121 tatataaagc atcaaaaaca acaacctcat gggctatttt atctaaagct gttttaatcg
     6181 tctcaagatg aatatcagga agtttattgg gtaaatttct tgttaaaata tagctcatat
     6241 aagctctagc acgatagcga ttatcctcaa atctttgtat atcttttata tacattatac
     6301 accttcttta ttatgtttaa attcaggcac aatctttaat aaagcacctg aaatatcttc
     6361 gcatgtttgt aattttttta tctcttcatt aagccaatca agatcaactt tattattctt
     6421 tgctacaaaa atactttcgt attgtgtttt agcatcattt tcatcgatta aaagctcttc
     6481 ataaagcttc tcaccttttc ttaaacctgt gattttaatt tctaaatcat tacgattaga
     6541 aagcaaaagc atttttttag ccaaatctat aatttttaca ggcttgccca tatctaaaac
     6601 aaaaagttca cctccttttg cgatagctcc agcttgtaaa acaagctgta ctgcctcagc
     6661 tacaagcata aaataacgta ctatatcagg atgtgttaaa gttaaaggct cattatttga
     6721 aatctgtgct ttaaatttcg gtatcacact accactagaa cctaaaacat tgccaaaacg
     6781 cacacaagca acttcaaaat tttcatcact catacttaaa gtataaagct cacaaaccct
     6841 tttagtacaa cccataatat ttgttggacg cactgcctta tctgtgctta tcataacaaa
     6901 tttagctact ttattttctt tagcgctatc gcataatatt ttagttccta aaatattatt
     6961 aactacagct gaatgtggat ttttctcaca aagaggtaca tgtttataag ctgctgcatg
     7021 taaaataagt tcaggcttat aagtttttaa tacctcatct aagctttgtt tatctaaaat
     7081 actcaataaa ataggagtga tttgttcttt atacaaattt aaatcatcat tgatcttata
     7141 aagattatac tcactatgat caaccataat aaggtgctta gcaccaaatt taatacactg
     7201 tttacaaagc tcactaccta tagttccacc tgctccactt accaaaacca ctttatcttt
     7261 caaaaaagct gccacagcac tatcgtctaa atcttttggt tttctagcaa gcaagtcttc
     7321 tatgctgata tctcttgctt catttcttgt aaaagaaaat attttcacat cgcaaatacc
     7381 ataggctata agttcttcaa aaagcttttt aagttcttct tgttcaagcc ttaaagcaat
     7441 aatagcagtt tttacccctt gatctacata ggattttatt ttttcttttt cttctacaac
     7501 aaatttatca caataagtcc ctataagctc ttttctcgca tctatcacgc ccacaggaaa
     7561 aagccccaaa gaaccttcct ttgcaccttt taataaatgc aaagctttag aagtcgctcc
     7621 tacaacaata caaggcgttt cttcttttat tttagaaggt ttaaaatcca caagcattct
     7681 tttactaatc cttaaagtac ctataaacat ataagaaaga acaaagtcta tcacaatagc
     7741 acttcttgga aaaggattaa aaaagtcact aaaaaaataa aaaataacca aaaaacaaag
     7801 ctctgccaaa accaaagcaa tgaaaatttt tcttgcttca ttaagagaaa aaaatctcca
     7861 agccacttta taaattctaa aaacaaataa aaatgcaagt tttaaaataa gcaaaataat
     7921 agcagaaact atcataccat gataaaaaat actcggaata tctccactaa atcttaaaga
     7981 aaaagctaaa taaacactaa gtaaaattaa aataatatct gaagttaaaa aaaatgccaa
     8041 tcttttgctt ttatgaaaaa tcattttaag cctttatact ctttaaaatc agttttgaaa
     8101 tttcataaac atcatcttta ctcattactg tgccacttgg caaacaaatt cctttttgaa
     8161 aaaataactc actattgcca ttaagataag ctttagctcc cttaaacact tcttgagtgt
     8221 gcatagcttt ccacaagggt cttgtttcta tttgctcatt ttgtaaatct tctatgagtt
     8281 ttgaaatttt tggatacaaa gcaatatttt tttgactgat acttatatct ttttgacaag
     8341 cattaagttc atttttgtca aaatcaatca aagccgtgct taaccaacga ttacttcttg
     8401 aattttccaa ctcatctaaa aagctaaaat ggtctcctaa aaattcttta taccactcat
     8461 aaatttttct ttttttaagc actctttgtt ctaaaacctc catttgtgcc acgccaatag
     8521 cacctaaaac gttacttaaa cggtaattat aaccataatc taaatgttca taatgcaaac
     8581 aattttccct cgcttgagtg ctataaaatc ttgctttttc aatcttttct ttattctttc
     8641 ctataagcat acctccacct gaagtggtga tgattttatt accattataa gaataaactc
     8701 caaattctcc aaaagttccc aaagctttat ccttataaaa actccctaaa gcttcggcag
     8761 catcttcgat taaaacaata tcattttctt tacaaatttc aacaatttca tccatttttg
     8821 ctgcattacc gtaaagataa gttaaaatca atgcttttgg ttttttttca cattctttaa
     8881 tagcaagttt taataatttc acatcaatat tataagtttc atcacagtct ataaaaacag
     8941 gtcttgcttt aagatagcaa ataggcgcta ctgaagcaat aaaagtaaaa gaagaagcta
     9001 aaacaatatc atcttgtttt acccctgcta ctcttaaagc caaatgcaaa gccgctgtag
     9061 ctgagtttaa agctagggca ttttcacttt tactataatc cttcacgttt tgttcaaagc
     9121 gatttacaaa ttcacccaaa ggtgctatat aattgctttt aaaaacttct tctatgtatt
     9181 ttaattcatt accacccata tgcggaggag aaagaaaaaa tctcatgatt tatcctttgt
     9241 ataaaacaaa tctttataaa ttaactgtat tttacctaaa aaaatttaca aagaatcaaa
     9301 cagaaatctt tttaaatttc atatttttct ttttgcaggc actcccacaa aaacaccttt
     9361 ttcatcttga cttttaacca aagctgcccc accacctaaa atactatcat cagctaagct
     9421 taaattcggc aaaacacaag aattaatccc caaaaaacaa tttttaccga tttttacatt
     9481 acctgcacat ttagccccca cactcacatg agaaaactcc cctactacgc attcatgctc
     9541 aatcacactt gaagtgttta aaatcacgcc tttttctatc ttggccttgg catttaccac
     9601 tacataaggc ataatcaaaa cccccgcatt ttccgctaca ctcgcactag agcttataag
     9661 agcactttta tggataagat taacgacttt aaagccattt tttgaaattt tttgataaat
     9721 cttctttcga atttcattat ttcctatagc tatgaaaata tcatattttg gcaaggtact
     9781 ttcaaatttc attcctttaa aatcatctaa aaaaatacat tctttatagc ccatgttttt
     9841 agccacatct tcgcaaacaa gtccatgacc accagtacca taaatataaa ttttttcagt
     9901 tcttgccatt aaatttctcc gttgtaacat gcccttcttt gtttactcca ctgcgtttta
     9961 aaacctttaa agctgttaaa aaaataattt ttaaatccaa taaaaaagaa atatttttca
    10021 cataatatac atcaagttca aattttttct gccaagaaat tgcatttcta ccatttacct
    10081 gtgcccatcc ggttatacct ggacgcactt tatgacgcag tttttgttct tcgttataaa
    10141 gggataaata ctccactaaa agaggtcttg gacctacaaa gctcatatct ccttttaaaa
    10201 cattcaaaag ttgcaaaagc tcatctaaac tcaagcttct aacgattttt ccaaaagctt
    10261 ttaaacgcaa ttcatcgctt aataattcac cattttcatc cctttcatcg ctcatggttt
    10321 taaatttata aattttaaaa attttctcat ctaatccagg gcgattctga gtaaaaataa
    10381 cacttccttg agtaagtttt aaaagcaaaa caatgattaa aataacagga gaaaaaaaca
    10441 ctaaaaggac caaagctaaa ataaaatcaa aaattctttt taaaaatttc tcatacattt
    10501 ttaactaccc tatcataaag ttttaaataa cgctgtgcaa taatgttttc atcgtattgt
    10561 aaagcatctt tagcagcgtt ttttcctaaa tttagtctta gtttttcatc ttctaataaa
    10621 agtaaaattt tttcgcttaa atccttagta tcttttgttt ttacccaaag tccatcataa
    10681 gcattagaaa tagcctccac gcaaccttca caatcactta ccactatagc tttaccacaa
    10741 gcttttgcct ctaaaacact cacaggaaaa ccttctttat agcttggtaa aacaaagata
    10801 tcacaatttt gtaaaagctc tacaatatca cttctagaac caaaataatg tacctttcct
    10861 gaatttaaaa attccaaact cgcacaagaa agattatcat ctcttccgcc aactaaaaca
    10921 aaatttgctt tatcttttaa catagtagca ctctcataaa attcttttat acctttatgc
    10981 cataaagccc ttgctatcat aagaacaata ggttttttat ctatatttaa atttttccaa
    11041 aaaagctctt ttttctctga ttctatataa atgggaaaaa atttttttaa attaatccct
    11101 acagatttta tcacacaaat tttattctct ttaagtccta agttacgcat aaattttgca
    11161 ttactttcat ttacaaaaac aaattgatga gcgaatttaa aacttaattt ataaagatta
    11221 ttgatcgcaa aacgcactaa atttgcttta aaaccttgtt ctatataaaa agatcccaaa
    11281 ccttccacta aagcaaaacg ataaggaatt tttacccatt ttgccgctaa aattccaaaa
    11341 atattgcttt tatgtgccgc actttgaatg agatcgagat ttaatttctt taaaacttta
    11401 acaagataaa aaaaattttt taaaaccaca aaaggattca aactagctct tgaaaactca
    11461 taaacaatta cttttaaacc aagatctcta agtttttgcg tgtattcatc ttgtggcact
    11521 ataacaaaaa cttcatcttt tctatctttt aacgctttga taataggcat tctaaagtga
    11581 taaatacttg ctcctgcatg cgataaaaat cctactctca tttttaatct ttaaatttta
    11641 agtttaaaaa ttttagcatc tctagaatta atcactaaat caaataaatt cttatcataa
    11701 ttacccaaaa aaaacatttg cacataagca ctattgaaca tagttttatc cattaaaata
    11761 aattgtgcat aaggaatagc actatctttt aaataaaaaa tataaaactg ggctttatca
    11821 tcaattggag tgattttata ttcgccttgc ttgatagaat taatctctac gatactattt
    11881 acagaaatca cactaccacc tattttaaaa cttctaaaat catcgcttaa aaccactcca
    11941 ttactaagat aaatttctcc atttttaaca tcaaatggat aagccgtact aaaaataaaa
    12001 ggtttatcca aaacccctgt atctaaatta ataaaagaaa aactagccac tgtagaaaaa
    12061 atcaaagaca tcctagcggg catataaaga taaatatcac gagtttttgg tgtatcgatt
    12121 ttaaagttag gctttgacaa ggaagctaaa aacaaatcca cattgctttg attataatct
    12181 ttcatcatag cccgcaaaat atctgttttt aaaatatcat tttgcggagc ataaaagctt
    12241 ttttctgtat attctacact aagtcttgcc atattagcca cggcttgctc gtctttactt
    12301 aaaacaaaag acggaaaaaa actatcctta cctaaatgct ttccaccatc taccaaagtt
    12361 ttcacatcgc tataataacg cacaggataa ccatagtccc accaagtcac cacataatcc
    12421 tctctattag ctatgctttt taattgattt aataatgata cttcattttg agaaaaaaca
    12481 gttggcgctt tataattata aatatgaaca aacactggag ttaaagtcaa aacagttgca
    12541 aaaataatac aaacatttga aattgattga ttgtattttt taaccattat aattttaaac
    12601 tcacttaata aaaaaccaaa tcctagagcc attataggca cagaataaat ggtaaatcta
    12661 agccctcctt ttaaagctaa aaatccaagt accaatatag gtagagccat aatcatactt
    12721 ttatgttttc tcaaaagcca cgcaaaacca agcaaagaaa acaaaaagac aatttcacta
    12781 ccactaattc ttcgcataaa ttcactaaaa tctacatttt caacttcttg tatagtttga
    12841 ttgacattaa aatacataaa tccttgtgct aaattcacac tctcatcact tctaaaaata
    12901 tagaatttaa gctgataaag tataggatca accccaccac ttaaaatcaa aaatactaaa
    12961 gttgcaacac caaaaattcc tataatcata aaatttaagc gtttttcttc taaggcaaat
    13021 aaagcaaaaa gtattactat aatagcactt tgataaaacc atgctatatt tgaaagggca
    13081 agagaagcca aaatcacagc tatataaaaa atcttttctt ttctatggaa aataagtgta
    13141 tagattaaaa aaagaccaat taaagctaca tttaaagtat aacttgaagg ataccaccaa
    13201 agataaattc ctataaataa cggcaaaaca atcactaaaa aaaagtcttt ttttaaaatc
    13261 attctcacca tgaaaaataa aataaacata ggtaaaacaa tcactagcat atctgtatca
    13321 taatacccac tcatagtgcg attataataa ctatttgcta tgcttgctaa aagagcggct
    13381 acaaagccca tcaaaggacg tttgtattca ttagccagta aaataatagg aattaccacc
    13441 aaagaagata aaaaagtact catgtataaa ataatacttt caaaagaaaa aggcgtaatt
    13501 ttataaagcc aataagtaaa agtagataaa gaagaaccat aataactcaa atcattaggc
    13561 tgatgaaaac ctgctatcat atctcttgca ccctcagcaa aagcataacc atcatttgaa
    13621 ataatcatca attgattatt aaaaaaatac tcactaaact cgcttgccca ccaaatccaa
    13681 tacaatctac aaaacacact aaaagcataa gcaaacaaga tcattaagcc caaaatcaaa
    13741 tagggatttt ttaagtattc tttttttaac atttcttatc ctaataaata ttttaaagca
    13801 tcacgtgcaa tttttacttt atcaaagacc ctagctctag tcttagcttt atttttatat
    13861 gcctttctta atttatcatc ttcaagcata gtctttaaac ccttaaacat agaattttca
    13921 ttatccactt ccactaaaag cccaaattca tcatcgccaa aaagctctct tgcaccgctt
    13981 ttatgatcag tgcaaaccac cgcacaacca caagctaaac tttcaattaa aacatttgaa
    14041 aaaccttcaa atacagaagc aaaagcaaaa aattcacatt tagccatata cttataagga
    14101 ttattatcaa agcctaaaag caaaactttt tcttctaaat tcaaatcttt aatcaaaagc
    14161 aaaagctcat ctttaagcac gccttcacct aaaatcacaa gttttaaatc tgtttttaat
    14221 ctcgcataag cacggattaa caaagcatga tttttgcctt tatctaacct acctacactt
    14281 aaaataaatt tatcttttag agctatatct tcaagggctt tttgttctat gctttctaaa
    14341 tcgatagcat tgtataaaat ttcacatttt tttggattta tattaaaatt ttctactaaa
    14401 tcttctaaat ttcccttaga attaggtaag attaaatctg ccttaggata aagtaaagaa
    14461 atcaaaaatt tatttgctaa agaattaaaa ctatttttcg catacatcac acttggtgtt
    14521 gtgcattcgt taatcacaag acgggtttta tttccaaaca ttcttgctat taaagctata
    14581 tagttagggc gatttaaaaa aacgaactct gtattaatgt ctaaatcttt acaaagtttt
    14641 ttgtatttta aagccaaaaa aggtagtttt aaaaatttca aaataggatt ttcactaggt
    14701 tttgaacatt ctaaaaaatg aatttgacac tctggaattt cataagaaat tttatcattc
    14761 attaagatca aatgtacttc aaatttcaaa ctcaaaatag gcaacaaagt cgccacaact
    14821 ctttcagcac caccacttcc taaagaataa ataaaaatgc ctaatttctg cataaagcca
    14881 cccgaatttt tgataatttt tcaatcatat tatttggaat tatacttaaa atgagtaata
    14941 tcaaagcagg agtattaatt tgtatgctca agcttttaaa caagcattta taaagtgctt
    15001 tataattttt tgcaagtttt gcatagtaag ccgccatttt ataataactt gcacaagttt
    15061 ttttatagtc tttatcccca gtcattttaa gttcattttc taaaatttta gccaattcta
    15121 aataccctaa ataaacccta tgagcgtttt tactagctcc taaagttacg ctatcttggt
    15181 taaaaattct ataaatccta aaagctttat gaatataaaa acttttctct ttatataaat
    15241 tcacccaaag tgtggcttca ttaccataaa attcttcatt aaaacgctta ttttcaagta
    15301 aagacttttt aaaaatagaa aaaaactccc cgctaaattt agccattaaa aaatcttttt
    15361 tagaaatttc agtgtcttta tctaatccct tgccactaaa ttcattgctt aaatttcctt
    15421 ctttttctat caaacaattt ccaaaaacat gagcataacc ttcatttact ttttgcatta
    15481 aggtgcttaa agcttgagct aaaagctcat catcatcatc taaaaaagtt ataaattcac
    15541 catttgcttg atctaaacca ttgtttttat tgccatttgg accttgcttg taattttgat
    15601 ttaaaaaata cttaatgcga tcatcatctt tttgtaaatt ttgtaccacg cttttagtat
    15661 catcgctaga attatcatca cttacaataa tttctaagtc tttaaagtct tgattttgta
    15721 tacttttaat ggccttttct agtaaaattt gacgattaaa agtcggtact ataacagaaa
    15781 gcttaggcat ttttaacctc ggctatgagt ttgagccatt cctctttaat atgagaaatt
    15841 tcaaagtctt tgcatctttg ttttgcatta tttgcaagtt cttttctaaa attttcattg
    15901 ttcaaaacaa gttcaagttt tttagcaagc gctacttcat caccacaatc caccaaaagc
    15961 ccatcataat tatctttaat taaatcctta gcaccattat aataagaact tgaaattcta
    16021 caaacttcaa aatacaaact ttcgatcaaa accgttggca aaccctctac aaaagaacaa
    16081 agacaaagca cctttgcttt ttcataaaga gccttaacat tttctacacg ccctaaaaac
    16141 tcaactttta ttcctaaaga ttttactttg tattcaagct cttgtcttaa ttctccatct
    16201 cctgctataa caaatttata attttcttgt aaatttttat ccaaatgtgc tatagccttt
    16261 aaaaacatta cagggttttt attatgatct aaacgcccta taaaaaggac taaattttct
    16321 ttttcaaaac tagaattaaa agaaatttca tcactaaaat ggcaaggatt tagcaaaagt
    16381 ttaacccttt ttacaaatct ttcataatat gccctatcac tacttccaag cacacttaaa
    16441 gcatcacaga aaggataact tacccttctt aaaaaacgcc aaattttagg ttttaaatac
    16501 gctttattac tatgttcgct aatgatcaat ggagttttaa accctatctt ggcaacaata
    16561 caagcaatat tagttgtatc taaaaaagaa ataaaaacat cggctttgct ttcttttaaa
    16621 gctcttctta aagcaaaaaa tttcttaaaa cggcttgcga ttttatgata aagcgtgtca
    16681 aatctaaatt gctctaaggt cacaacttca acttcatttt caagcttata aaaagattct
    16741 cctgagtgaa atttgataat gcttacttca tgctctttac aaaatgtgtt agctagggtt
    16801 actaaaacac gctcagcacc tcctgaattt aaagttgcaa taataaagtt tattttcatc
    16861 atttcccctc tttaagccta ccgtgttcta aacgataaac cttatcacat tgcgttatag
    16921 tagaaagacg atgtgcgatg ataatcatag ttttatcttt ggaaatttta taaatttcat
    16981 ccatgatttt tgcctcactt tgagtatcaa gtgcagaagt agcctcatca agcactaaaa
    17041 tttcaggctc tagatacaaa gcccttgcta tagctatgcg ctgtttttga ccaccactta
    17101 aattactgcc cccatcgcct acttttgttt gtactccttg aggtaaattt tttataaaat
    17161 gttctaaatt tgcttgcttg ataactctat taagtttttc ttcatcaatt ttgtctccaa
    17221 aagtaatatt tttggctatg ctatcattaa aaagatagat attttgcgga atatagccta
    17281 ttttttgacg ataatctttt gcattgtttg catttagttt ttgattatca actaaaattt
    17341 gcccttcttt tggttttaaa agccctatga taagatctac taaagtactt tttccgcaac
    17401 cactctcccc tataaaagca attttttcac cctttttaat gcttaaatta agatttttaa
    17461 acaaatgttt ttttccttcg taaccaaaac taagattacg aattttaagc tcttgtttaa
    17521 agcttaattt ttcctcacct aaattttctt cttcttgttt taaattttga taaataatat
    17581 ccaaagaaga atgataataa agcaaatcat gatagcttgt aataatacga tttgcacttg
    17641 gcattaaacg ataaagtgcc aaaacaaaaa tagaaatagt agataaaata cccgaaatat
    17701 cactttcatt tttcaaaact aaaaacacca cgataaaaac aagcacgcaa aaacctatgc
    17761 tttcaagata aattctaggc accgcagcta cgctttcgtt gataatattt gccttagaaa
    17821 aagcttcact ttgtgcttta aaaagactta acactccatc ttctttggtt ttaagcttga
    17881 taaatttgaa attatttaaa ttagtattta aaatttcaaa aaaatttttc atggcttctt
    17941 cacgcctaag acctgctttt ttgataatag ggcttaaaat tttcactaaa ataaaagcat
    18001 ttaacactat aaaaatgctt aaaaataaag tgattttata attaatcaaa agcattaaaa
    18061 cataaagtaa aaataccaca aaaatttcac tcatcaaaag taaaaatgat gaaatcatag
    18121 tgcttagatt ataaacttcc cctgtaatgg actttaaaat ttcagattga tttttttggg
    18181 taaatttctc ataattgata tttaaaaatt tagaaaaaac cttataagcg atcttatgat
    18241 aacgcccttt agaaaatctt gccaaaagat gaaaataata cgcattgagc aaagctctaa
    18301 gcacataaaa aacaataagc cctactccaa aataaacaat gatttcaaaa acagggatat
    18361 ttagatattc ttttaagcta attaaatatt gattgcgatc aaaataagaa aaatcactag
    18421 ccaaagtgat aaaaggcatc attaaagaaa tcgcaaaagt ttctataaaa gagacaaata
    18481 ccgaaaatat aagcaagaaa aataaaaatt ttttatcttc tttgcttaaa ataaaaaaaa
    18541 gttttttcag cactgttttt cccaatcaaa agcagactta caaataagct ctaaatcatc
    18601 gtatttaggt tgccaagaag taagatttct tatcttgttt gcatcagaaa ttaacacact
    18661 aggatcacct gcacgacgtg aggtaagctc tactttaaaa tccactccac taactttttt
    18721 catcgcttca attacttctt ttacactaaa accatgtcca tagcctacat taaaaacatt
    18781 gctttcatta tcttgtaaat aatctaaagc cgccaaatgt gcacttgaaa tatcatctac
    18841 atggataaaa tctctaatac aagtaccatc ttttgtatca taatcatcgc caaatataaa
    18901 aagtttatca cgttttcctg cagcacattc agctgcaact tttatcagta aagttgcttt
    18961 tggataacgt tgtcctaaag tataatccat acaagcccct gcgacattaa aatatcttaa
    19021 aatacaatgt ttaaattcag gatttgccat gcttgcatca cgcaaaacct cttcactcat
    19081 aagtttgcta cgcccataag gattaatagg tgctaaagga cttgtttcgc tcacaactgg
    19141 agtttgtggc tcaccataag tagctgcagt tgaagaaaat ataaagttat tcactccagt
    19201 ttgcaaacaa gttttaatga gatttgttgt attaacagtg ttgtttatat aatattttaa
    19261 aggattttgc atactttcaa aaacttcaat actcgctgca aaatgcacga tagtatcaaa
    19321 tttttctctt tcaaaaagtg tttttacacc ttgaaaatcg cttaaatctt gttcaaaaaa
    19381 tttaaagtcc cttatttttc gtaaatcttc tattgcaatt ttagagcctt tagaaagatt
    19441 atccaaaaca taaatttcat gacttgtctt taaaaattgc cttaaagtat gagaacctat
    19501 ataacctgca ccaccgctaa taagaatttt catcatcatt ccttaatttc aaaattgtat
    19561 cttgcaaaga aattctaata tatatttttt aatgcttaat ttaatactta aacctgaaat
    19621 tttgaaattt cactttcgca cgcttttaca aaaacttcta cataagaatg atttgctttt
    19681 tttgcacaca aaaaatctct catataagaa agaaaatgga tataatcttc ttcactaaca
    19741 ttgcctttaa taagttcata ttttaaaaaa agcatatagg tatttaaaac atcactttcg
    19801 caatactcgt ggattttttc aaactcattt tgataaaaaa gcttcatcac ctcatcacca
    19861 tgcacatcat attttcctgg taaacccacc atagaacaaa tcatatcaag cttcactcct
    19921 cgcccattag cccccaaaga ctctaataaa tcgcaatgtt ttaattctga aaatcttgtt
    19981 ttataattat tccatttatc actttgcgta tctagataag ttgctgcttt gatattgtat
    20041 tttaaagctc ttaaaacaag aacaggcata tcgaaatttt taccattaaa actaactaat
    20101 tttggctcat aattttctat gaaattaaaa aaattaaaaa tcatttcttt ttcatcttgc
    20161 ccatcgattt tattcacttt aataaatttt ccaaaattat tacttaaaac tgcacaaata
    20221 ctgatgattt tatgatatgg caaaggcaaa aactcgcttc cactttgttc tttttgccac
    20281 tgaagtgctt ttaaactcac ttccaaatca cttcctttaa aatctaaagt tttgcgaata
    20341 agctcaacat ctggtacact ctcacaatca aaaacacaaa tataaccttc attttttgtc
    20401 atttttaacc tttttttaaa taatttcgct aaaatcataa caaaaatttt aaaatattag
    20461 gcttttaatg aaaatagcaa tcgttcgtct atcagcactt ggcgatatca ttcaaagtgc
    20521 tgtgactttg caatttatca aaaatttcaa aaaagatata gaaattcatt ggtttgtgga
    20581 tgaaaaattt gaaggtatac ttaaaaatca tcctttgata gataaactct atgctctgcc
    20641 cttaaaagaa aaaaaatttt taaaaagttt aaaaattctt cttgaggcaa gaaaaaacaa
    20701 ttacaatgca gtgatagatc tgcaaggact catgaaatcc gctattgtaa gcagaatttt
    20761 aagtagaaat aattttggtt ttgataaaaa tagccttaaa gaaagttttg ctcataattt
    20821 ttataatcaa aaacttgagt tagattataa tgaaaatgta tttgtaaggt atttaagtct
    20881 tgtctctttc atgctaaatg ctgactttaa tgctaaaaat ttagccttta aacaagatat
    20941 ttttaatgta gatgaaaatc taaagcaact cttaagcaat aaactcaagc ttaatgaaaa
    21001 tgaaaaaaat atactcatac atgtgggctc tagtgaagaa aataaaatct atcctaaaac
    21061 caaactggct atactttgca aacttttaat taatgaattt caaaaagcaa aaatttggct
    21121 tgcttggggc aatgtaaaag aatacgaatt tgccaaagag gttttaaatc ttagtggcat
    21181 tgatgagaca catgtagaat tagcaccaaa atttaatctt gaagagctga tagcttttac
    21241 aaaaatgatg gatcttgtta taggaaatga tagcggccca acacatttgg cttttgcttt
    21301 aaacaaagca tctatcacga tctttggtgc aacaccaagc tgccgcaatg cttttcaaac
    21361 ccatattaat aaaatcattg atgcgggtaa aaaaatccaa aatgctaaac atattgataa
    21421 aagtgatttt tgcatcacac gcatagaaga agaagatatt ttcaaacttg ccaaaggctt
    21481 acttgatgaa aagttgcgat agattatatc ttagtcttta ttatattttg aaattttttg
    21541 ttcactttat gcctgattgc atcttgcatt ttctagcttt aattgtagca agaattactt
    21601 tttatcttaa taaaaaacac cgtaaaatta tcgatacaaa tttacaaatc tgttttcctc
    21661 aatacacgca aaaagaacgc aataagctgt ctttaaaaat ttatgaaaat tttgctcaat
    21721 ttgggattga ttgtttgcaa aatcaaaaca ctaccaagga aaaaattctc aataaggtaa
    21781 aatttatcaa tgaaaatttt cttacagatg ccttggcctt aaagcgtcct attattttcg
    21841 caactgcaca ctatggaaac tgggaaattt taagtcttac ttatgcggct aaatatggtg
    21901 cgatttccat agtaggaaaa aagttaaaaa gtgaagttat gtatgaaatt ttaagccaaa
    21961 aacgcactca atttgatata gagcttatcg ataaaaaagg tggtataaga caaatgttaa
    22021 gcgctttaaa aaaagggcga actttgggaa ttttaactga tcaagattgc accgatagtg
    22081 aaagcgtaaa attaagattt tttaacaaag aagtgaatta tcaaatgggt gcaagtttta
    22141 tcgcacaaag aagcaatgct ttgattatcc ctgtttatgt ttataaagaa gataataaat
    22201 tttgcataga attttttaaa gcaaaagatt ctcaaaatgc aagtctagag gaacttacat
    22261 tttaccaagc acaaagttgt gaagaaatga ttaaaaaaag accttgggaa tacttttttt
    22321 tccatagacg ttttgcaagt tatgatgaag aaatttacaa ggatgcaaaa tgaatttaaa
    22381 acaaataagc gttattatca tcgtaaaaaa tgctgagcaa accttgtttg agtgtttaac
    22441 ttctttaaaa gattttgatg aaattatctt acttaacaat gaaagtagcg ataataccct
    22501 aaaaataact aatgaattta agaaagattt tactaattta cacatttatc acagtgcttt
    22561 cataggtttt ggggctttaa aaaatcttgc tttaagctat gcgaaaaatg attggatttt
    22621 aagcattgat gcagacgaag tgcttgaaaa tgagtgcatt agtgagctca agaatttaga
    22681 acttcaaaaa gaaaacatca ttgtacttag tcgtaaaaat ttatataaag gtgaatggat
    22741 aaaggcttgt ggttggtggc ctgattatgt tttaagaatt tttaataaaa attttactcg
    22801 ttttaacgat aatttagtgc atgaaagcct tattttacct aatgatacta aaaaagttca
    22861 tcttaaaaat ggattaaggc attatgcttt tagagatatt tctcacttga ttgataaaat
    22921 gcagcattac tcaagccttt gggcaaaaca aaatatacac aaaaaaagtg gagttttaaa
    22981 ggcgaattta agagcttttt ggactttttt tagaaattat tttttaaaaa gtggcttttt
    23041 atacggttac aaaggcttta taattagcat ttgcaatgcc ttaggagctt tttttaaata
    23101 tatgaaatta tatgaacttc aaaggcaaaa accaaaaact tgtgctttga tcattacaac
    23161 atataatcaa aaagaaagac ttaaattagt gcttgatagt gttaaaaatc tagctttttt
    23221 acccaatgaa gttttaatcg cagatgacgg cagcaaagaa gatacagcaa agcttattca
    23281 agaatatcaa aaagattttc cttgtccttt aaaacacatt tggcaagaag atgatggctt
    23341 taggcttagt aaaagtcgca acaaagcaat taaaaattcc ttaagtgaat atataatagt
    23401 tattgatggt gatatgattt tagaaaaaga ttttataaaa gagcatttag aatttgcaca
    23461 aagaaggctt tttttacaag gttcaagagt gattttaaac aaaaaagaaa gtgaaaaaat
    23521 cttaaaaaat gatgattatc gcctagcttt taataaaaaa gattttaaaa gttataaaaa
    23581 ttctttttta gctaaaatgc tttatatctt ttcaaaaaaa gatgaaaaag tctttaagaa
    23641 aaccgcactt attaaaggta ttagaggttg taatatgagt ttttttaagg ctgattttga
    23701 tgagcttgat ggttttaatg aaaattttat tggctggggc agggaagata gtgagtttgc
    23761 agctagattt ttatttaata aaggtatttt tagacgctta aaatttaaag ctattgctta
    23821 tcatatttat cacgaagaaa atagcaaaaa aatgtttgaa agtaatcatc aaatttattt
    23881 agacactata caaaataaaa agatttcttg gttaggataa aaaatgagaa tacaacttaa
    23941 agagtatatc aaaaaccata tctattttgg attattattt agaataaaaa taaataataa
    24001 aattatgaaa atcctaaaac caaataataa attttataaa atccagatca atgataaaaa
    24061 atataaaaaa acagtagcta ttcattttag tgctggatta ggtgattact taatgtttcg
    24121 tccgttttta aaagaagtta gaaattatta taaaaattat cacattagta ttattgggga
    24181 acaaagtttt aaagatttat gtttagaata cgacagagat tgcattgatg aatttattta
    24241 ttttaaacaa aatatgggtt ttaatgctta tgtaatgcca aatattaatt atgatatttt
    24301 aatttcagct tttcataaac tacatgaaaa tacagaaaat aatgtaaatt gtattcaagc
    24361 taaagaaaaa atttgccttg tttatggttg ctctgaatta agctttaatg atagagaacg
    24421 tattgtaaac acagtattta caaaggctat ttacttaaaa aatcaagaag attttcaagc
    24481 tttacattac aaagaa
//
LOCUS       DAPWAA010000021        23379 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.021, whole genome shotgun sequence.
ACCESSION   DAPWAA010000021 DAPWAA010000000
VERSION     DAPWAA010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23379
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.021"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            314..1996
                     /locus_tag="RTF91_000772"
     CDS             314..1996
                     /locus_tag="RTF91_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDZ4943680.1"
                     /translation="MEQILTWQQAYDPFSNIWLSALVAFLPILCFLICLVVLKLKGYQ
                     AGFLTVILAALVALFAYKMPWNLVGASFIQGFTNGMWPIAWIIIAAIFLYKLSIKSGS
                     FEIIKQSVMSITPDHRIQVILIGFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLQAA
                     GLCLIANTAPVAFGAVGIPIIAMTNLVGIEQHSVSAMVGRMLVPLSLTIPFFIVFLMD
                     GFKGIKETFPAILVAALSFTATQFLSSNHLGAELPDIISAVVSLAVTTIFLKFWKPKN
                     IFRFDNEINFAQDNTLSFNQILKAWSPFILLIICIIIWTQPWFKALFDKDGILSYTSI
                     TLQFSNITTGILSPSITGIGEAKPLSLALGVDLINGKTVAQAGTAILLAAFLTIAILK
                     IKTEDAAECFWTTLKEMAIPCITIGLVVAFAFISKNSGMSTTLGLAFAHTGDAFSFFS
                     PIIGWIGVFLTGSDTSANLLFGTLQQVSAQKLGISEALFLAANSVGGVVGKMISPQSI
                     AIACAAVGLVGKESDLFKFTLKYSIAFIILIGIWTCIIAFFLQGIIPEVIVK"
     gene            2117..2857
                     /locus_tag="RTF91_000773"
     CDS             2117..2857
                     /locus_tag="RTF91_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDZ4943681.1"
                     /translation="MMKKVYFYATCLGSAAMQQSVLNSIKLLRREGIEVIFKKNQTCC
                     AQPSFNSGYFDESREIALYNVDLFDKDYPIIVPSGSCAGMMSHDYIELFKNKPEFSKV
                     KDFSSRVIELSQYLDEVLKVDYEDKGTPVKVTWHSNCHALRVQKSIQASKNLIKKLKN
                     VELIELQYEEECCGFGGTFSVKEPEISNAMVRSKIKDIQNSGAKYLISGDGGCLLNID
                     GTMKRMGLDIKGIHLYDFLFKRLEGERL"
     gene            2854..4293
                     /locus_tag="RTF91_000774"
     CDS             2854..4293
                     /locus_tag="RTF91_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HDZ4943682.1"
                     /translation="MSQKIPHEQIVQIKLNDKQMQENLMTAMHTLQKNRLNVIDARFK
                     DWQGLRAKAKQAKNNALMSLEERLLEFEKNATKNGIKVYWASSDEDACEIVYEIMKEK
                     NITKLLKGKSMASEEIGLNHYLEKKGLKAIETDLGELILQLNEEPPLHIVVPAIHRNR
                     HEIGQIFKNKLGAKLENDEPESLNAVAREHLRKDFEGLKLGLSGVNFAMSREGAFWLI
                     ENEGNGRMCTTAPDIHIALCGIEKVMESFEDAATMVSLLTPSATGQFIPTYNNIITGP
                     RKNGDLDGPKEVHVILFDHNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQ
                     TTYPGPIGEVISPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLRCDKIGQ
                     GKNPPLGANNVHHNALEAFAFKQFKNIATNGDKWRFSLSKAHYFNWVIQNFAGVLPVI
                     KKWYAFKELPQIKMDLYKEIQNLEGVNYE"
     gene            4286..4942
                     /locus_tag="RTF91_000775"
     CDS             4286..4942
                     /locus_tag="RTF91_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HDZ4943683.1"
                     /translation="MSKIDEISSKSKANILADLKKAYKETNFTRIESIDPVEHIQTTE
                     DMLAEMKQKMSDNKYIVENATKDTLEEKINEIITKYDFKKMIYGSDLNLNLDQIQAEE
                     KICFDKEIENLRSEVFHSDFSIIHARAGVSSHGVALVPSSSAQPRMLSLAPKLCIVLL
                     KKENVVKSLSEALNLVKKENEILPTNILFIAGPSRTADIELITVFGVHGPQIAHIVIY
                     "
     gene            5035..5220
                     /locus_tag="RTF91_000776"
     CDS             5035..5220
                     /locus_tag="RTF91_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943684.1"
                     /translation="MDKKIKYFILDKFDYSYPILSKDVKCPFCENFFPIEYSSNLKTI
                     EKECPFCNNKMDIKLKD"
     gene            complement(5217..6248)
                     /locus_tag="RTF91_000777"
     CDS             complement(5217..6248)
                     /locus_tag="RTF91_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0069 family protein"
                     /protein_id="HDZ4943685.1"
                     /translation="MKKNIVFFEVKGGSDKGEDGYRKDTMPMVNALKAKGWNAEVIFF
                     EVGKKDEIYKYVKENFDGYVSRINPGNLKEENEYFDMLRKLCADKLVGMPHPDAMIGY
                     GAKDALTKLADTNLVPNDTYAYYDVKTFKENFPKSLAKGERVLKQNRGSTGEGIWRVS
                     VEGSVSGDSLPLNTKIKCTEAKDNHVEHRELGEFMDFCEQYIIGDNGMLVDMTFLPRI
                     KEGEIRLLMLYNTPVNVVHKKPAEDADAFSATLFSGAKYRYDKPEDWKALVDMFLSEL
                     PKVREKLGNYDLPLIWTADFILDTDEKGNDKYVLGEINCSCVGFTSHLELADEVASNI
                     INIVSKTKA"
     gene            complement(6330..7226)
                     /gene="sppA"
                     /locus_tag="RTF91_000778"
     CDS             complement(6330..7226)
                     /gene="sppA"
                     /locus_tag="RTF91_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDZ4943686.1"
                     /translation="MQNLKSFFKVLGYGIKFINTYFKTFVLLLIVIWILMPSVNSSSN
                     LANLERIDLKGEIFDSSAVLEKIINAKNDNSIKGVLFVIDSPGGAFAPSMELALAIKD
                     LKNKKPVLVYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSGLANKLGI
                     KEQTIQAGEFKSAGTFARAWSEDERNFLQGLIDQSYDLFTGFVAKERTLDLNKKNQWA
                     NARVFLAAKAKELGLIDGLSNYENAKKELEKLANVSNPVWKEEDKFDKFLNRLEGQAS
                     SLISKSLIEIVYKTNSSFISTR"
     gene            complement(7214..8443)
                     /locus_tag="RTF91_000779"
     CDS             complement(7214..8443)
                     /locus_tag="RTF91_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDZ4943687.1"
                     /translation="MFIVNARYLFLCDEDFTILENQAFVFEDKILELGEFENLRKKYP
                     QAKLIKTPKNSVILPAFINPHTHLEFSANSTTLHFGEFLIWLKSVINSRSILNAQAKE
                     ELILQNIKKMQKSGIGTIGEISSFGSDLNPCLKVSQKGMRVVFFNEILGTDENQVEDK
                     KQEFFKRFENSLKFKNDFFIPAISIHSPYSTHPSLASFALNLAKKQDLLVSTHFLESK
                     AENIWLREAKGGFKKWLGNFMLNPKPLYTPKDFIKLFKGVRTLFTHCVYLKEYEWLDK
                     NLHSITHCAFSNRLLSQKSLDLEKALKSGLNIHLGTDGLSSNISLSLLDEMRASLLVH
                     KNFDLLKLAPKLLQMATLYPARALNLNLGELKKGKIADFSVFELGKCDKKQAPLQFVL
                     NAKEVDKLFIKGKECKI"
     gene            8534..9016
                     /gene="aroQ"
                     /locus_tag="RTF91_000780"
     CDS             8534..9016
                     /gene="aroQ"
                     /locus_tag="RTF91_000780"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HDZ4943688.1"
                     /translation="MKIMIIQGPNVNMLGVREVGIYGAMKMEEIHEQMKLAASQNSVE
                     LDFFQSNFEGEIVDKIQECLGTVDGIIINAAGYTHTSVAIRDAIAAVALPTIEVHISN
                     VYRREEFRQKSLIAPVCSGTIVGFGPFGYHLALMGIIQICEQIKNLRAMQQAQQTNKQ
                     "
     gene            9016..9489
                     /gene="folK"
                     /locus_tag="RTF91_000781"
     CDS             9016..9489
                     /gene="folK"
                     /locus_tag="RTF91_000781"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDZ4943689.1"
                     /translation="MLKIQRAKHFEKSRFFPFFSQTMCSFKYLAFIGLGSNIEPEKKR
                     FDTLFRVMMDDKRFKILSTSPMLINEAFGFKEQKDFTNAVMLIQTNLHARALLKVLLY
                     YEIKFKRKRTFKNAPRTLDLDLLYFSQKVKRDKWCEVPHKGVKERVSVILPLGMI"
     gene            9499..10953
                     /gene="flhF"
                     /locus_tag="RTF91_000782"
     CDS             9499..10953
                     /gene="flhF"
                     /locus_tag="RTF91_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HDZ4943690.1"
                     /translation="MGQLIHTFTVEDTEQIIPKVKEDYGDKALIITNKQIRPKTLNRS
                     ALYEVMVAIEESDYEEHLKKQGKSLPTKKSSPKPSSTSLAEGKIRSQMPQEDEDVVLD
                     FSNTRLNANLNTAKNNNIAKKNYQDFPQNKINPHQNKTLDFDDFKEKLSEVSNEISKV
                     TNTPLENYIPNPNYNKKMENFEKQFEKQINKLNDKIDLLADMMWDDKAEARKNLMIPP
                     EFASIYKQAKESGMLENHLEAIMKATIENMPAAMKTNKDAVQRYFHSLLRNILPCRVE
                     SEIKKQKIMMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQY
                     AKMMKLPIIDSIEPKDLDEAIKSLNNCEVILVDTIGNSQYDQSKLAKTKEFLMHSNAD
                     IDVNLVVSANTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLIYETNIPLSF
                     FSTGQEVPDDLEVANSDFLVHCILEGFNKGKNNE"
     gene            10946..11812
                     /gene="flhG"
                     /locus_tag="RTF91_000783"
     CDS             10946..11812
                     /gene="flhG"
                     /locus_tag="RTF91_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis ATPase FlhG"
                     /protein_id="HDZ4943691.1"
                     /translation="MNNQANKLHNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANL
                     ANVLANHGYKVGLFDADIGLANLDVILNVRIQKNLLHVLRGECSLEDILIEVKPNLWL
                     IPGESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVVI
                     VTVPDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPL
                     NLEFLGYLSASKDVSGSIKKRTLFSDENTVSSDELKALASKLLYRLEQKVLDNVSNRN
                     FSSFFRKIIERF"
     gene            11831..12187
                     /locus_tag="RTF91_000784"
     CDS             11831..12187
                     /locus_tag="RTF91_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943692.1"
                     /translation="MRPENYVAFFTVCGFFIGLAFSVISIDEAFDILIFTCFITFMFY
                     VFIHIAIMNFIDVKKISGRIFNKHDYEKTSNNIINDLVIREKKMDIILEKLNEEREEL
                     KKNESKERRRNAKRAA"
     gene            12168..12860
                     /locus_tag="RTF91_000785"
     CDS             12168..12860
                     /locus_tag="RTF91_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HDZ4943693.1"
                     /translation="MLKEPPKAYAQMLKKEQDELVLSYMPALRAMAFRLKERLPSSID
                     VNDLISIGVEEMIKLSRRYDKEQNDNFWGFARKRVNGSMLDYLRSLDVMSRNNRKIIK
                     DIDAIMDEYFLEHECEPDDEYLAKKLDLDVEKIKEVRTAHAISYTLPIDEQIELYNED
                     NTLEKIEKEELLEKIHEVLDDLKERDQLIIQLYYYEELSLKEISEILEISESRISQIH
                     KKLLKKLRERLT"
     gene            12860..13939
                     /gene="fliM"
                     /locus_tag="RTF91_000786"
     CDS             12860..13939
                     /gene="fliM"
                     /locus_tag="RTF91_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HDZ4943694.1"
                     /translation="MAEILSQEEIDALLEVVDDNTDTPIASNSKDEKDERSIVVYDFK
                     RPNRVSKEQLRTIKGIHDKLARNLASQISSMMRSIVETKLHSVDQMTYGEFLMSLPSP
                     TSFNVFSIKPLDGNCVLEINPSIAFPMIDRLLGGQGDSYEASRELTDIELNLLDSILR
                     IIMQRLKESWATVTEIYPSIEAKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMVNIC
                     YPVVHLESILSRLANRDIMMGETSAKKSRNKELKTLIGRAEVVYEAILGKTLINVHEF
                     LELKQGDILRLDREADDKAIVSIDKKDVFLAQIGLHRFRKSIKILELIRTDKDEIKEI
                     LEKYEEERKAKASVYDEPEEEDEEI"
     gene            13936..14778
                     /gene="fliY"
                     /locus_tag="RTF91_000787"
     CDS             13936..14778
                     /gene="fliY"
                     /locus_tag="RTF91_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliY"
                     /protein_id="HDZ4943695.1"
                     /translation="MINDFLKMFTNECISTIEGLTGKSAEFSEYKEFDVNASDTLKAP
                     LVYAIFNITNGGKIGILASAVLMSAIGEWMMGEEEITKNDQLGPDEMDAAKEAIQNII
                     SAFSTTLGAQKDIPKMDFSIESCEFVPESIDFKDFKKLFLYDVKIGDLEEQVSLAMDQ
                     TLHNILSGKLAETGNANTDSNRNAEEKAIMLGEELKNINLIMDVRLPVRVRIGNKKML
                     LKDVLTMDIGSVVELNQLANDPLEILIGDKRIAYGEVVIVDGNFGVQITEIGSKKERL
                     EQLR"
     gene            14846..15451
                     /locus_tag="RTF91_000788"
     CDS             14846..15451
                     /locus_tag="RTF91_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HDZ4943696.1"
                     /translation="MDTKIIKDVEKFENIPELEKAVTFFGSARLKEDNFYYQQAKILA
                     QKCAQNGFCVISGGGGGIMCAANEGAFSQKNNTNSISSVGFNIFLPHEQKLNDFVEYN
                     ITFESLAIRKMALIEKSLAFVIFPGGFGTLDELCEILTLKQLEFKKDVPIILFGNEFW
                     RGFDEFVRNSLLKLEVISKGDELKYKITDDLDFIINILKEI"
     gene            15451..16467
                     /gene="mnmA"
                     /locus_tag="RTF91_000789"
     CDS             15451..16467
                     /gene="mnmA"
                     /locus_tag="RTF91_000789"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDZ4943697.1"
                     /translation="MKILVAMSGGVDSTVTAYKLKNLGHEIIGCYMKLHGKPNYHEEN
                     IKKVEKVANFLQIPYHILDLQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLL
                     EFAKSLGCEKLATGHYARLENNLIKTALDESKDQSYFLASADKEALKYLIFPLGEMKK
                     EDVKKFASTIEILKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGEVLDNTGKVVGK
                     HEGYMHYTIGKRRGFEVRGAHEPHFVLKINPKQNQIIVGTKEELKISEFSLKNINLFI
                     DAKELDCEVKIRYRSKSTPCKVEIHDDKSAKITLKDPVYGLASGQMAVFYDDDKVIAS
                     GFIE"
     gene            complement(16644..16886)
                     /locus_tag="RTF91_000790"
                     /pseudo
     CDS             complement(16644..16886)
                     /locus_tag="RTF91_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860895.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate/malate translocator"
     gene            complement(17120..17217)
                     /gene="ffs"
                     /locus_tag="RTF91_000791"
     ncRNA           complement(17120..17217)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="RTF91_000791"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            17411..18115
                     /locus_tag="RTF91_000792"
     CDS             17411..18115
                     /locus_tag="RTF91_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HDZ4943698.1"
                     /translation="MEIKWSKDFSIKNMQLDKQHELIFEITNLAGDLALKVQDNNTQY
                     KDDLKQILTKLFQYIKIHFKDEEKFMESIDFPLIEEHKKSHRILVEKTKELLEHSNDI
                     IKISQELSILTKDWILDHFVNEDLWIAHFTKKALHLQEIHYTLEQYIKLKSIKQNLSA
                     EKTHNYICNCSLHIHAVPQTIHQELISKENALKCEKCGQILVHLDHFDLNQNFEKLNA
                     IFEDTLENHHFTTQKI"
     gene            18133..20010
                     /locus_tag="RTF91_000793"
     CDS             18133..20010
                     /locus_tag="RTF91_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HDZ4943699.1"
                     /translation="MNFQVKTVETFNPFESLRHEQANTKQILDFRIIDFKLLCSSTKP
                     EKTKTYQRKDLDLFYSDDFFVKNYNTIVQKFLIEIYPKTQNYPFIIKLQSNSNLTYLK
                     ANIQFTENFKYYPGLKFDILQNIYKIMIKQKFLILRLNKNLFKNIDDFILSIQKNPSI
                     KELELEIAKGVDKIEHKSDEIIYYRDANEEYFNENISYDQGNYCKPVEKNELLFEYIY
                     RILGKEGRNLRGEILPLNPIDFLDNPFVIKDESIYTEELEDRIKYFSAHYGFLNKDNI
                     GYWITNDLKLSQVGLKTTGSIKTSINENVNLEITNFDINDDAIKSGIVNVQASDIKVN
                     GSVGATKLYGKNISIKGLTHAKSEIFAQNIFITTHKGTLQADTVYIKNLENGIVVAKN
                     VFVENCIGGKIEAENIYICNLLTDNTLYPKKNLIITNNLKFKNNILVSPLVSINNHSS
                     IESAECENLKNLGLKIKSKLDNVISKMQNYYDYLIKNQINIIKIQKTENPSAIEMKFS
                     NLYHDIIKKYNDISISYKKLIKLKYQVDTKLNFLDEMVYNVKIYIKAENIGEDNFLKF
                     YPKINTNDELKHHINLKDYEKVLYLEKGQQVNFITSDNYEQNDIEEIKALFEKLEKDN
                     S"
     gene            complement(20014..21651)
                     /locus_tag="RTF91_000794"
     CDS             complement(20014..21651)
                     /locus_tag="RTF91_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDZ4943700.1"
                     /translation="MMNSFYNGVSGVKTNSFGIDIYANNIANVNTTGFKYSDAQFKDI
                     FYSTVTTQSTNPAQGGYGSGSASSNVVFEQGSFVASDSEFDVALQGKGFFGVLGADNN
                     AYYTRNGTFKRDANGYLVDSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNN
                     GFTVNSNDSFSIGTTASQQAIKVPVNMYLPPQVTQNVKWSGSLNTNTTTEVVKVNLDP
                     NKFNITKTEDGKYVVNGSVSKEDVFSAKAGDRIILNFTDDNGVKTSFEATLDENLNFK
                     SNKLDLKGLDENSIKLDTVQIATEQQKANKDILESDIYNADGSKSTLRVLLERVLPQE
                     GDNIQYKAIAQIYDSNGNAVGDPTEGNMVFDKNGALLQNNITSIANPNGGTINIDLGT
                     PYDASKPGSGYGGIYIKEGVEKNVVTQQDGVAEGFFKQYNISDDGSIIAQFSNGKNAI
                     VGKLALYNFINEQGLAAMGDNIFAATANSGNASFIMKNGQIVNTAKFKGGFLEQSNVD
                     LSVELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR"
     gene            complement(21655..22518)
                     /locus_tag="RTF91_000795"
     CDS             complement(21655..22518)
                     /locus_tag="RTF91_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod modification protein"
                     /protein_id="HDZ4943701.1"
                     /translation="MMTTTNWNNNLNWTNTQTSDKTTKADNSSNSSSSGVVSNPNATL
                     DKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNITMQKMVETMEKLS
                     NSFSTSMSTAAVGAIGKMATVNENKVKLTGADEVIALKMYLPEDSDNKGITLEVYDKN
                     NKLVFSEKSNEGKEVSKGLFTLEWPGRNNDGVYAGNGEYSVKVVYNNKNGEKITANYG
                     TYPIEGIKFVDGVAYAKMGGQYVSFDDIGEISDYKFGSSSTSVGDSSSADSSSGNSSG
                     STEEGDKEEKA"
     gene            complement(22572..>23379)
                     /locus_tag="RTF91_000796"
     CDS             complement(22572..>23379)
                     /locus_tag="RTF91_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDZ4943702.1"
                     /translation="NEKELNKDNLKDFNKELNKNQEKNNLNQENMQDKNLKNNDQNLT
                     QKDFSLTKETKNNKENKDTKQNLFEQKLNFENLNKTQVVQTKENNTNFNNNTHKEIFI
                     QEQTHGENIDQNSLDELNSLVKDLNKVMQNNTRNITPKETLQHFSQDLKEAVEQYKAP
                     ITKLSITLNPNNLGEVEVTLIQRGNNLHINFNSNTNAMNLFIQNQTEFKNSLVNMGFT
                     GLEMNFSDQGKREQNQNQGKNRSRYSFKDALDGKNEGEKINLELVLAKYF"
BASE COUNT         8523 a         3523 c         3520 g         7813 t
ORIGIN      
        1 cttttttctt taaaatgcgt gtttatctaa aaaatttgaa aatacaaatc ctttgaaaca
       61 ttcatttaaa gagtttgaag atacttatcc ttataaaatt aggacttgag gctaaatttc
      121 ttgctacctc taatcaaaat aagattttta ttttgttcta tttttatatt tatttaatat
      181 ttataatatt accaaaatac acaaaataat taataataat ataataataa tttactttaa
      241 ctctatattt ctttatttaa atttaatttt ttgttacaat aaatttatat ataaatcatc
      301 taaggaggaa aaattggagc aaattttaac atggcaacaa gcttatgatc ctttttcaaa
      361 catttggctt agtgctttag tggcattttt acccatactg tgttttttaa tttgtttagt
      421 tgttttaaaa cttaaaggtt atcaagcagg ttttttaacc gttatacttg ctgctttagt
      481 ggctttattt gcttataaaa tgccttggaa tttagtaggt gcgagtttta ttcaaggctt
      541 tacaaatggt atgtggccta tagcttggat tattatcgcg gcaatctttc tttacaaact
      601 ttctataaaa tcaggttctt ttgagatcat taaacaaagt gtgatgagta ttactccaga
      661 tcatagaatt caagtgattt taataggctt ttgttttggt tcatttttag aaggcgctat
      721 aggttttggt ggccctgtgg ctataactgc tgcactttta gtaggacttg gattgcgtcc
      781 tttgcaagct gcaggacttt gtcttatcgc aaatactgct cctgttgctt ttggtgcggt
      841 agggattcct attattgcta tgacaaatct tgtcggtata gaacagcact cagtctctgc
      901 tatggttggt agaatgctag ttcctttaag tcttaccata ccttttttca tagtattttt
      961 aatggatgga tttaaaggta tcaaagaaac ttttccagct attttggtag cagcactaag
     1021 ttttacagcc actcaatttt taagctcaaa tcatttagga gcggagctgc ctgatattat
     1081 ttcagctgtg gtttctttag cggttacaac tatattttta aaattttgga aaccaaaaaa
     1141 tatttttaga ttcgataatg aaattaattt tgctcaagat aatactctaa gttttaatca
     1201 aattttaaaa gcttggtcac cttttatttt gcttattatt tgtattatta tttggacgca
     1261 accttggttt aaagctcttt ttgataaaga tggtatttta agctatacaa gcattacttt
     1321 acaatttagc aatatcacaa ctggaatttt aagcccttct ataacaggca taggagaagc
     1381 caaaccttta tctttagcct taggtgtaga tttaatcaat ggcaaaaccg tagctcaagc
     1441 aggaacagcg attttacttg cagctttttt aactatagct attttaaaaa tcaaaactga
     1501 agatgccgca gaatgttttt ggactacctt aaaagaaatg gctatacctt gtataactat
     1561 aggtttggtt gtagcttttg cttttatttc taaaaacagt ggtatgagta caaccttagg
     1621 gcttgccttt gcacatacag gagatgcttt ttctttcttt tcaccaatca ttggttggat
     1681 aggagtattt ttaaccggat cagatacaag tgctaattta ctttttggaa ccttgcaaca
     1741 agtcagtgcc caaaaactag gtatcagtga agctttattt ttagcagcta attcagtagg
     1801 tggggtcgtt ggaaaaatga tcagtccaca aagtattgct atagcttgtg cagcagttgg
     1861 acttgtagga aaagaatctg atctttttaa attcacatta aaatattcta tagcttttat
     1921 tattttaata ggaatttgga cttgcattat agcttttttc ttgcaaggaa tcattcctga
     1981 agttatagtg aaataattta aatttttaag ttttacttca acaaatattc atttttagaa
     2041 tatttgttgg aaattttact ttgcttttat ttttacggga ttagaatatt tatcctaaat
     2101 tatcccaaaa ggagagatga tgaaaaaggt gtatttttac gctacatgct taggaagtgc
     2161 tgctatgcag caaagtgttt taaattcaat aaaacttttg aggcgtgaag gtattgaggt
     2221 gatttttaaa aaaaatcaaa cctgttgtgc ccaaccttct tttaactcag gttattttga
     2281 tgaaagtcgt gagattgctt tatataatgt agatttattt gataaagatt atcccattat
     2341 tgtaccaagt ggttcttgtg caggtatgat gagtcatgat tatatagaac tttttaaaaa
     2401 taagcctgaa ttttctaaag taaaagattt tagctctagg gtgatagaac tttcacaata
     2461 ccttgatgaa gttttaaaag tagattatga agacaaaggc acacctgtaa aagtaacttg
     2521 gcattctaat tgtcatgctt taagggtgca aaaaagcata caagcgagca aaaaccttat
     2581 caaaaaacta aaaaatgtag aattaataga actccaatac gaagaagaat gctgcggttt
     2641 tggtgggact ttttcagtaa aagagcctga aatttcaaat gctatggtaa gaagtaaaat
     2701 aaaagatata caaaatagtg gtgcaaaata cctcatcagc ggtgatggag gttgtctttt
     2761 aaatatagat ggcactatga aaagaatggg tttagatatc aaaggcatac atttatatga
     2821 ctttttattt aaacgcttag aaggagaaag actatgagtc aaaaaatccc tcacgaacaa
     2881 atcgttcaaa tcaaactcaa cgacaaacaa atgcaagaaa atttaatgac tgcgatgcat
     2941 accttgcaaa aaaatagact caatgttatt gatgctagat ttaaagactg gcaaggatta
     3001 agagctaaag ccaaacaagc caaaaacaat gccttaatga gtctagaaga aaggctttta
     3061 gaatttgaaa aaaatgctac aaaaaatggc attaaggtgt attgggcaag tagtgatgaa
     3121 gatgcttgtg aaattgtcta tgaaattatg aaagaaaaaa acatcactaa gcttttaaaa
     3181 ggcaagtcta tggcgagcga agaaataggt ttaaatcact acttagaaaa aaaaggttta
     3241 aaggctatag aaactgatct tggggaactt attttacaac ttaatgaaga acctccttta
     3301 catatagttg ttcctgctat acacagaaat cgccacgaaa taggacaaat tttcaaaaat
     3361 aaactgggtg caaaactaga aaatgatgag cctgaaagct taaatgctgt agctagagag
     3421 cacttaagaa aagattttga aggtttaaaa cttggactta gcggggtaaa ttttgctatg
     3481 tcaagagaag gagctttttg gcttatagaa aatgaaggaa acggtagaat gtgcaccact
     3541 gcaccggata ttcatatcgc actttgtggt atagaaaaag tcatggaaag ctttgaagat
     3601 gcagccacta tggtttcttt actcacccct tcagctacag gacaattcat tccaacttat
     3661 aataacatca tcacaggtcc tagaaaaaac ggggatttag acggtcctaa agaagtgcat
     3721 gtgattttat ttgatcataa tcgctctaaa atgttagctc atgaagatta ttatgaagct
     3781 ttacgttgta ttcgatgtgg agcttgtatg aatttttgtc ccgtttatga tcaaatcggt
     3841 ggacacgctt atcaaactac ttatccagga cctataggag aagtaatcag cccaaatatt
     3901 tttggtatag atcatacagg agatatttta aatttctgtt cgctttgcgg gcgttgttct
     3961 gaagtttgtc cggtacaaat tcctttggct gatcttatta gaaaattaag atgcgataaa
     4021 ataggacaag gtaaaaatcc acctctaggt gcaaataatg ttcatcataa tgccttagaa
     4081 gcctttgcct ttaaacaatt taaaaatatt gcaactaatg gtgataaatg gcgtttttca
     4141 ctttcaaaag cacattattt taactgggta atacaaaatt ttgcaggagt tttacctgtg
     4201 attaaaaaat ggtacgcttt taaagaatta cctcaaatta aaatggatct ttataaggaa
     4261 atccaaaatt tagaaggagt aaactatgag taaaatcgat gaaatttcaa gcaaaagcaa
     4321 agcaaatatt ttagccgatc ttaaaaaagc ttacaaagaa acaaatttta cacgcattga
     4381 aagcatagat cctgtagaac atattcaaac cactgaagat atgctagcag aaatgaagca
     4441 aaaaatgagc gataataaat atatcgttga aaatgccact aaagatactt tagaagaaaa
     4501 aattaatgaa attatcacaa aatatgactt taaaaaaatg atctatggaa gtgatctaaa
     4561 tcttaattta gatcaaattc aagcagaaga aaaaatttgc tttgataaag aaatcgaaaa
     4621 tttaagatct gaagtttttc atagtgattt ttctatcatt cacgcaagag caggagtcag
     4681 ttctcacgga gtcgcgcttg taccttcaag tagcgctcaa cctagaatgc taagccttgc
     4741 acccaaactt tgcatagtac tccttaaaaa agaaaatgtt gtaaaaagcc ttagtgaagc
     4801 tttaaattta gtaaaaaaag aaaatgaaat cctacctact aatatcttat ttattgcagg
     4861 accttcaaga acagcagata tagagcttat aaccgttttt ggtgttcatg gaccacaaat
     4921 tgctcatatt gttatttact aattctacca ttagaatcag taaatttcta attaacattt
     4981 atgcgttaaa ataataaatt aaagtataag aattagatta aagaaggaaa tttgatggat
     5041 aaaaaaataa aatattttat tttagataaa tttgattact cctatcctat tctaagcaaa
     5101 gatgtaaaat gtccattttg tgaaaatttt ttcccaatag aatatagctc gaacctaaaa
     5161 acaatagaaa aagaatgtcc attttgcaat aataaaatgg acattaagct taaagactaa
     5221 gccttagttt tgcttacaat attaataata ttcgaagcta cttcatcagc aagttctaaa
     5281 tgagaagtaa aacctacaca agaacaatta atctcgccta aaacatattt atcattgcct
     5341 ttttcatcag tatctaaaat aaaatcagct gtccaaatca atggcaagtc ataattgcct
     5401 aatttttctc ttactttagg aagttcactc aaaaacatat ctaccaaagc cttccaatct
     5461 tctggcttat catagcgata ttttgctcca ctaaaaagtg tggcagaaaa agcatcagca
     5521 tcttcggctg gttttttatg tactacattt acaggggtat tataaagcat taaaagtctg
     5581 atttcacctt ctttaatgcg tggtaaaaaa gtcatatcca caagcatacc attatcgcct
     5641 atgatatact gctcacaaaa atccataaat tctccaagct ctctatgttc tacatgatta
     5701 tccttagctt ctgtacattt gatttttgta ttcaaaggta agctatctcc actgacactg
     5761 ccttctacac tcacacgcca aatcccttct cctgtagaac cacggttttg ttttaaaacc
     5821 ctttcacctt tagctaaact ttttggaaaa ttttctttaa aagtcttaac atcataataa
     5881 gcataagtat catttggaac aagattagta tctgctaact ttgtaagtgc atctttagca
     5941 ccataaccta tcatagcatc agggtgaggc atacctacaa gcttatcagc acaaagtttt
     6001 cttagcatat caaaatactc attttcttct ttaagattac caggattgat acgcgaaaca
     6061 taaccatcaa aattttcttt tacatatttg taaatttcat cttttttacc cacttcaaaa
     6121 aaaatcacct cagcattcca acccttagct tttaaagcat ttaccatagg catggtatct
     6181 tttctataac catcctctcc tttatcactt ccacctttaa cttcgaaaaa aacaatattt
     6241 tttttcattg atttactcct tattttaaga tataaataat tattacataa aaacattaca
     6301 aaaattaaat aaaaaatatt ttatatattt tacctagtgc ttataaaact actattagtc
     6361 ttataaacaa tttcaattaa acttttactt atcaaacttg atgcttgtcc ttctaagcga
     6421 ttaagaaact tatcaaactt atcttcttct ttccaaacag gatttgaaac attagcaagt
     6481 ttttcaagtt cttttttggc attttcataa ttactaagcc catctataag accaagttct
     6541 ttagccttag cagccaaaaa cactcttgcg tttgcccatt gatttttttt attaagatct
     6601 agcgtccttt ctttagcaac aaaacctgtg aaaagatcat agctttgatc aatcaaacct
     6661 tgtaaaaaat ttctctcatc ctcactccaa gctcttgcaa aagttccagc acttttaaat
     6721 tcacccgctt gaatggtttg ttctttaatg ccaagtttat tagccaagcc acttaaatca
     6781 gctccttgca taatcacgcc aatagaacct ataaaacttg ctggattggc taaaatttta
     6841 ttcgctccaa cgcccgctaa ataacttcca cttgccatag ttccacttgc ataaacaagc
     6901 acaggttttt tattttttaa atcctttatg gctaaagcta gctccatact aggagcaaaa
     6961 gctccaccag gagagtctat aacaaaaagc actcctttaa tactattgtc atttttagca
     7021 ttgataattt tttccaaaac tgcagaacta tcaaaaattt caccctttaa atcaatgcgt
     7081 tctaaatttg caagattaga acttgaattt acactcggca ttaagatcca tataacaatc
     7141 aataataaaa caaaggtttt aaaataagta ttgataaatt ttatcccata tcctaaaacc
     7201 ttaaaaaatg attttaaatt ttgcattctt ttccttttat aaataattta tctacttctt
     7261 tagcatttaa aacaaactgc aaaggggctt gctttttatc acattttcct aactcaaaca
     7321 cgctaaaatc agcaatttta ccttttttaa gctctcctaa atttaaattt aaggcccttg
     7381 caggatagag tgttgccatt tgcaaaagct taggtgctaa ttttaacaaa tcaaaattct
     7441 tatgcacaag taaacttgca cgcatttcat caagtaaaga caaagagata tttgaactaa
     7501 gtccatcagt tcctaaatgg atatttaaac cgctttttaa agctttttct aaatccaagc
     7561 ttttttgact taaaagacga ttcgaaaaag cacaatgcgt gatagaatgt aaatttttat
     7621 ccaaccattc atattctttt agatatacac aatgcgtaaa aagagtcctt actcctttaa
     7681 aaagtttaat aaaatccttt ggagtataaa gaggtttagg gtttaacatg aaatttccaa
     7741 gccatttttt aaaaccacct ttagcctctc taagccaaat attttctgct ttactttcta
     7801 aaaaatgtgt actaactaat aaatcttgtt tttttgctaa atttaacgca aaagaagcca
     7861 agctaggatg agttgaataa ggagaatgga tagaaattgc agggataaaa aaatcatttt
     7921 taaatttcaa agaattttca aatcttttaa aaaattcttg ttttttatct tcaacttgat
     7981 tttcatccgt gcctaaaatt tcattaaaaa acactacacg catacccttt tgactaacct
     8041 tcaagcaagg atttaaatcg ctcccaaaac ttgaaatttc acctatggtc cctataccac
     8101 ttttttgcat ttttttaata ttttgaagta ttaattcttc tttagcctgt gcattcaata
     8161 tagaacgaga atttataaca cttttaagcc aaattaaaaa ttctccaaaa tgtaaagttg
     8221 tagaatttgc actaaattct aagtgcgtat gaggatttat aaaagcaggt aaaataactg
     8281 aatttttagg tgtttttatc agtttagctt ggggatattt ttttcttaaa ttttcaaatt
     8341 cacctaattc taaaatttta tcctcaaaaa caaaggcttg attttctagt attgtaaaat
     8401 cttcatcgca caaaaaaaga tatcttgcat tgactataaa cacgattttc ctttcaaaaa
     8461 tcacattgta gcaaaaattt atttttaaaa tgttataata aaaggttaaa aataaatttt
     8521 taaggttaaa tccatgaaaa taatgattat ccaaggtcca aatgtcaata tgcttggcgt
     8581 aagagaagtg ggaatttatg gtgcgatgaa aatggaagaa attcatgaac aaatgaaact
     8641 tgcagcatca caaaacagtg tagaacttga ctttttccaa agtaattttg aaggtgaaat
     8701 cgtagataaa attcaagaat gccttggaac ggttgatgga attattatca atgcagcagg
     8761 ctatactcat acttcagtag ccattcgtga tgctattgca gcagtagctt tgcctacaat
     8821 tgaagtgcat attagcaatg tttatcgtag agaagaattt cgtcaaaaaa gccttatagc
     8881 tcctgtatgc tctggaacta ttgtgggttt tggtcctttt ggttatcact tagctttaat
     8941 gggtataatt caaatttgtg aacaaataaa aaatttgcgt gcaatgcaac aagcacaaca
     9001 aacaaataaa caataatgct aaaaattcaa agagcaaaac actttgaaaa aagtcgtttt
     9061 ttcccttttt tcagtcaaac tatgtgctct tttaaatatt tagcctttat aggcttagga
     9121 agcaatatag agcccgaaaa aaaaagattt gacacacttt ttcgagtaat gatggatgat
     9181 aaaagattta aaattttatc aacatctcct atgttgatca atgaagcctt tggttttaaa
     9241 gagcaaaaag attttaccaa tgctgtcatg ctaatacaaa ctaatttgca tgcacgagca
     9301 cttttgaaag ttttgcttta ttatgaaata aaatttaaac gcaagagaac tttcaaaaac
     9361 gctcctagaa cgcttgattt agatctttta tacttttcac aaaaagtcaa gcgtgacaag
     9421 tggtgtgagg tgcctcataa aggggttaaa gaaagagtga gtgtaatttt gcctttaggc
     9481 atgatataag gaatataaat gggacaactt atacatactt ttactgttga agatacggaa
     9541 caaattatac ctaaagtaaa agaagattac ggagataaag ctttaattat aacaaataaa
     9601 caaattcgtc ctaaaacctt gaatcgcagt gcactttatg aggttatggt agctatagaa
     9661 gaaagcgact atgaagaaca cttaaaaaaa caagggaaat ctttacctac aaaaaaaagc
     9721 tcaccaaaac catcttctac ttctcttgcg gaaggaaaaa tcagatctca aatgccacaa
     9781 gaagatgaag atgtagtctt agatttctca aacactcgct taaatgcaaa tttaaacact
     9841 gcaaaaaaca ataatatagc taaaaaaaac tatcaagatt ttccacaaaa caaaatcaat
     9901 cctcatcaaa ataagactct agactttgat gattttaaag aaaaactaag tgaagttagc
     9961 aatgaaattt ccaaagttac gaatacacct ttagaaaatt acatccctaa tccaaattat
    10021 aataaaaaaa tggaaaattt tgaaaagcaa tttgaaaaac aaatcaacaa gcttaatgac
    10081 aaaatagatc ttctagcaga tatgatgtgg gatgataaag ctgaggctag aaaaaatctt
    10141 atgatacccc ctgaatttgc aagcatttat aaacaagcta aagaaagcgg aatgcttgaa
    10201 aatcatctag aagcgattat gaaagcaacc atagaaaata tgccagctgc tatgaaaacc
    10261 aacaaagatg cagttcaaag atattttcac tcacttttaa gaaatatttt accttgtcgt
    10321 gtcgaaagtg agataaaaaa acaaaaaatc atgatgctag taggtccaac aggagtagga
    10381 aaaacaacaa ccttagcaaa actagctttt cgttatgctt atggagataa acgttataaa
    10441 acaggcatta ttacacttga tacttataga attggtgcgg ttgagcagct ttttcaatac
    10501 gcaaaaatga tgaaacttcc cattattgat agcatagagc caaaggattt agacgaggcg
    10561 ataaaaagtt taaataattg cgaagtgatt ttagttgata ctataggaaa ttcacaatat
    10621 gatcaaagca agcttgctaa aactaaagaa tttttaatgc actcaaatgc agacattgat
    10681 gtaaatttag ttgtttctgc aaatactaaa catgaagatt tgatggaaat ttataaaaat
    10741 ttttcatttt taaatattga cactttgatt attactaaat ttgacgaaac aaaggttttt
    10801 ggaaatattt tctcacttat ttatgaaaca aatattccat taagtttttt ctctacagga
    10861 caagaagtac cagatgattt agaagtagcc aatagtgatt ttctagttca ttgtatttta
    10921 gaagggttta ataaaggaaa aaataatgaa taaccaagca aataaacttc acaatctcat
    10981 gagtcaaaat gggactaaaa aatcccaaaa tactcatttt atagccatta caagtggaaa
    11041 aggcggcgtt ggaaaaagca ctattagcgc aaatctagcc aatgttttag caaaccatgg
    11101 ctataaggtt ggactttttg atgcagatat aggcttggcc aatttagatg ttattttaaa
    11161 tgtacgcata caaaaaaatc tcttgcatgt tttgcgtgga gaatgctcct tagaagacat
    11221 tttaatagaa gttaaaccaa atttatggct tatcccaggt gaaagcggag atgaaatttt
    11281 aaaatataat gataaaaata tttatgagag atttttaaat caagcaagta ttttagatga
    11341 gcttgatttt cttattattg acacaggtgc aggtattggt ggtaatattt taaatttttt
    11401 agaaatggct gatgaggttg taatagtaac tgttcctgac cctgcagcaa ttacagatgc
    11461 gtatgcaact ataaaaacaa cttctaagac gaaagaaaat ttactaatgc tctttaatgt
    11521 tgtaaaaaat gaaaatgaag ccttgaaagt ttttgaaaat attaaaaaag ttgcagatgc
    11581 aaacattaaa aaccctttaa atttagaatt cttaggatat ttaagtgctt ctaaagatgt
    11641 aagcggtagt attaaaaaaa gaactttatt tagtgatgaa aacacagtct caagcgatga
    11701 gcttaaagcc ttagcttcca agcttttata tagattggaa cagaaagtgc ttgataatgt
    11761 ttcaaatcgt aatttttcaa gtttttttag aaaaattatt gaaagatttt agcaataaag
    11821 agaagagatt atgaggccag aaaattacgt agcatttttt actgtttgtg gattttttat
    11881 aggacttgca tttagcgtta ttagcataga tgaagctttt gatattctaa tttttacttg
    11941 ttttattact tttatgtttt atgtttttat tcatattgct attatgaatt ttatagatgt
    12001 aaagaaaatt agcggtagaa tctttaataa gcacgattat gaaaaaacta gtaataatat
    12061 tatcaatgat ttagttattc gtgaaaagaa aatggatata attttagaaa agctcaacga
    12121 agaaagagaa gaattaaaga aaaatgaatc taaagaaaga cgaagaaatg ctaaaagagc
    12181 cgcctaaagc ttacgcacaa atgctaaaga aagaacaaga tgaacttgta ctttcttata
    12241 tgccagctct tcgtgctatg gcttttagat taaaagaacg cctaccttca agcatagatg
    12301 ttaatgatct tattagcata ggcgttgaag aaatgatcaa gctttcacgt cgttatgata
    12361 aagaacaaaa tgacaatttt tggggctttg caagaaaaag agttaatggt tctatgcttg
    12421 attatcttag aagtcttgat gtgatgagtc gcaataaccg taaaattatc aaagatattg
    12481 atgcaatcat ggatgaatat tttctcgagc atgaatgtga acctgatgat gaatatctag
    12541 caaaaaaact tgatttggat gtagaaaaaa tcaaagaagt aagaacagct catgccatta
    12601 gctataccct acctatcgat gaacaaatcg aactttataa tgaagataat actttagaaa
    12661 aaattgaaaa agaagaactt ttggaaaaaa ttcacgaagt attagacgat cttaaagagc
    12721 gggatcagct aatcattcaa ctttattatt atgaagaatt aagcttaaaa gaaatcagtg
    12781 aaattttaga aattagcgaa agcagaattt cgcaaattca caaaaaactt cttaaaaaac
    12841 ttagagaaag gctaacgtaa tggccgagat actctcccaa gaagaaattg atgctttact
    12901 tgaagttgtt gatgataata ctgacacacc catagcctca aattcaaaag atgaaaaaga
    12961 tgaaagaagt atcgttgtat acgatttcaa gcgtccaaat agggtttcaa aagaacagct
    13021 tagaacgatt aaaggtatac acgataaatt agcaagaaat ttagcctctc aaatttcatc
    13081 aatgatgaga agtatcgttg aaaccaaact tcattcagtc gatcaaatga cttatgggga
    13141 atttttaatg tctttgccaa gtccaacaag ttttaacgtt ttttctatta aacctttaga
    13201 tggaaactgt gttttagaaa tcaacccaag tattgctttt cctatgatag atagacttct
    13261 aggaggtcaa ggtgatagct acgaggcttc acgtgagctt accgatatag agcttaattt
    13321 gcttgattct attttgcgta ttatcatgca aagacttaaa gaaagttggg ctactgtaac
    13381 tgaaatttat cctagcatag aagctaaaga atcaagtcca aatgttgttc aaatcgtatc
    13441 tcaaaacgag atcgttatca tggtagtaat ggaaattatc ataggaaatt caagtggtat
    13501 ggtaaatatt tgctatcctg ttgtgcattt agaaagtata ttaagccgtt tagcaaaccg
    13561 cgatattatg atgggtgaaa cctcagctaa aaaatcacgc aataaagaac ttaaaacttt
    13621 aattggtcgt gctgaagtag tatatgaagc gattttagga aaaactttaa ttaatgttca
    13681 tgaattttta gaacttaaac aaggtgatat tttaagactt gatagagaag cagacgataa
    13741 ggctatagta agcattgata aaaaagatgt atttttagca caaattggat tgcatcgttt
    13801 tagaaaatct attaaaattt tagaactcat acgcacagat aaagatgaaa tcaaagaaat
    13861 tttggaaaaa tatgaagaag agcgtaaagc taaagctagt gtttatgatg agcctgaaga
    13921 ggaggatgaa gaaatatgat caatgatttt ttaaaaatgt ttacaaatga atgcatcagc
    13981 accattgaag gtttaacagg aaaaagtgcc gaatttagtg aatataaaga atttgatgta
    14041 aatgcaagtg atactttaaa agcacctttg gtatatgcta tatttaatat aacaaatggc
    14101 ggtaaaatag gaattctagc tagtgctgtt ttgatgagtg ctattggcga atggatgatg
    14161 ggcgaagaag aaattactaa aaatgatcaa ttgggccctg atgaaatgga tgcagctaag
    14221 gaagctatcc aaaacatcat ttcagcattt tctacaactt taggggctca aaaagatatc
    14281 ccgaaaatgg attttagcat agaatcttgt gagtttgtgc ctgaaagcat agattttaaa
    14341 gattttaaaa aattattttt atatgatgta aaaataggtg atttggaaga acaagtttct
    14401 ttagctatgg atcaaacact tcataatatc ctaagtggaa aactcgctga aacaggtaat
    14461 gcaaatactg attctaatcg caatgccgaa gaaaaagcaa tcatgcttgg cgaagaactt
    14521 aaaaatatca accttatcat ggatgtgcgt ttgcctgtac gtgtaagaat tggcaataaa
    14581 aaaatgcttt taaaagatgt tttaactatg gatataggtt cagttgtaga gctaaatcaa
    14641 ctcgcaaacg atccgcttga aattttaatc ggggataaaa gaattgccta tggtgaagta
    14701 gtgattgttg atggtaactt tggtgttcaa atcacagaaa ttggttctaa aaaagaaaga
    14761 ttggaacaat taagataaaa ttactctata aatttaaaaa aattagctat aatgaaaatc
    14821 tatagttttg ccaaaaaggt atttaatgga tacaaaaatc ataaaagatg ttgaaaaatt
    14881 tgaaaatata cccgaactag aaaaggctgt tacttttttt ggttcagcaa gacttaaaga
    14941 agataatttt tattatcagc aagctaaaat tttggcacaa aaatgtgctc aaaatggttt
    15001 ttgtgtgata agtggtggag gtggtggcat tatgtgtgca gccaatgaag gtgctttttc
    15061 gcaaaaaaat aatacaaatt caataagttc tgtaggattt aatatatttt tacctcatga
    15121 gcaaaagctt aatgattttg tagaatataa tattactttt gagagcttag ccatacgcaa
    15181 aatggctctt attgaaaaga gtctagcttt tgtgattttc ccaggcggct ttggaacact
    15241 tgatgaattg tgtgagattc ttacactaaa acaattagaa tttaaaaaag atgttcctat
    15301 tattttgttt gggaatgaat tttggcgagg ctttgatgag ttcgtcagaa attctttgct
    15361 caaacttgaa gtgatttcta aaggagatga gttaaagtat aaaatcactg acgacttgga
    15421 ttttataatt aatattttaa aggaaattta atgaaaattc tagtcgctat gagcggtgga
    15481 gttgatagta cagtcactgc ttataaactt aaaaatttag gtcatgaaat tataggttgt
    15541 tatatgaaac ttcatggcaa gccaaattat cacgaagaaa atatcaaaaa agtagaaaaa
    15601 gttgcaaatt ttttgcaaat tccttatcat atcttagatt tgcaagaaga ttttaaaaac
    15661 aaagtttata tgccttttgt tgatacttat aaagaaggta aaacgccaaa tccttgtgct
    15721 ttatgtaatc gttttatcaa gcttggaaaa cttttagaat ttgccaaaag tttaggttgt
    15781 gaaaaacttg ctacaggaca ttatgcaaga cttgaaaata acttaataaa aaccgcacta
    15841 gatgaaagca aagatcaaag ctatttttta gctagtgcag ataaagaagc tttaaaatat
    15901 cttatttttc cactaggtga aatgaaaaaa gaagatgtaa agaaatttgc ctctactata
    15961 gaaattttaa aatcttttgc tactcaaaag gaaagttctg agatttgctt tgttgaagat
    16021 acttatgtgc aagttttaga tcaatttatg gatacaaaaa ttcctggtga agtactagat
    16081 aacactggaa aagtagtagg taaacacgaa ggctatatgc attataccat aggtaaaaga
    16141 cgaggatttg aagtacgtgg agcacatgag ccgcattttg ttttaaaaat caatcctaaa
    16201 caaaatcaaa tcatcgtagg caccaaagaa gaacttaaaa tcagtgaatt tagcctaaaa
    16261 aatatcaatc ttttcataga tgctaaagaa cttgattgtg aagtaaaaat ccgctatcgt
    16321 tcaaaatcta caccttgcaa agtagaaatc catgatgata aaagtgcaaa aattacctta
    16381 aaagatcctg tttatgggct tgctagtgga caaatggcag tattttacga tgatgataaa
    16441 gtaatagcaa gtggttttat agagtaattt ctaggaaatt aattcctaga aattatttaa
    16501 aaaatcctaa aatttttcac caaacaagtc ctacggatac cactatcgac tatggattaa
    16561 agccatcata atttgcccaa tatcatgaaa agcataaaga atttataact tatgctataa
    16621 aaccaaccac taaaggattt aactgaaatt ttagtctcat caataagttg ttgcgtagaa
    16681 gtttttgaag cagctttggt ataaatttta ctgaaatttt caatttgata atttacatct
    16741 gtgctcaatt ttaaaaattt catcaacttt tacttttaaa ttcctactta ttagcattaa
    16801 ttaaagcttc caaagtagta agcctaaact acctcatagt cgttttatag aatatctctt
    16861 aaaacaattc ctttaagaat ttttagcacg cacagagctt tgagcaagtg gtgatatcgc
    16921 taagagctac catctctata tacaaaaagg gattttcctt ctatccatta ttttgatatt
    16981 ggtaatgtaa tttataatgc ttaaattcta attaactaat attttaatac atcttaaaat
    17041 tataattttt aaataaattt ttaatttata aaaataatag cctataaaaa atggatagag
    17101 aattttaaac gaagaaaacc tttccccaga taactgcggc acacactaaa atcaagtgct
    17161 ctgctgtgtt cccaccctga agcggtgctt aaaaatagca ttgcacaggt ctaagaaaag
    17221 gcctgaaaat tatatcataa catgcttaaa aagccttgag ttataaaaaa ctaaaataca
    17281 tatgtgtaaa taagtaacaa attgattata ttttagataa atttttaaaa tttatttgta
    17341 aaactatata ttttattttc caaaaaatac gattataaac aataattatc atatagtaaa
    17401 ggaaaaaaat atggaaatta aatggagtaa agattttagc attaaaaata tgcaattaga
    17461 caaacaacac gaacttattt ttgaaattac caatcttgca ggtgatttag ctctaaaagt
    17521 tcaagataac aatacacaat ataaagatga tttaaaacaa attctcacaa agctattcca
    17581 atacatcaaa attcatttta aagatgaaga aaaatttatg gaaagtattg attttccttt
    17641 gattgaagaa cataaaaaat cgcatagaat attagtagaa aaaaccaaag aacttttaga
    17701 gcattcaaat gatattataa aaatatctca agaactttct atattaacta aagattggat
    17761 tttagaccat tttgttaatg aagatttatg gatagctcat tttacaaaaa aagctctaca
    17821 tcttcaagaa attcattata ccttagagca atacataaaa ttaaaatcaa tcaaacaaaa
    17881 tctaagcgct gaaaaaactc ataattatat ttgcaactgt tctttgcaca tccacgcagt
    17941 tccacaaact atacatcaag aactcattag caaagagaat gccttaaagt gcgaaaaatg
    18001 tggacaaatt ctagtgcatt tggatcattt tgatttaaat caaaatttcg aaaaactaaa
    18061 tgctattttt gaagatacgc tagaaaatca ccactttaca actcaaaaaa tttgatatgg
    18121 ggggggggat agatgaattt tcaagtaaaa accgtagaaa cttttaatcc ttttgaaagc
    18181 ttaagacatg aacaagcaaa cacaaaacaa atccttgatt ttagaattat agattttaaa
    18241 cttctatgct ctagcacaaa accggaaaaa acaaaaactt accaaagaaa ggatcttgat
    18301 ttattttatt cagatgattt ttttgtaaaa aactacaata ccatagtgca aaaatttctt
    18361 atagaaattt atccaaaaac acaaaattat ccctttataa tcaaacttca atctaattcc
    18421 aacttaacct atctaaaagc taatatccaa tttacagaaa atttcaaata ctaccctggt
    18481 ttaaaatttg atattttgca aaatatttat aaaataatga tcaagcaaaa atttttaatt
    18541 ttaagactta ataaaaattt atttaaaaat attgatgatt ttatcctgtc tatacaaaaa
    18601 aatccatcta ttaaagaatt agaacttgaa attgctaaag gggtggataa aattgaacat
    18661 aaaagcgatg aaattattta ttatagagat gctaatgagg aatattttaa cgaaaatatt
    18721 agctatgatc aaggaaacta ctgcaaacct gttgaaaaaa atgaattgct ttttgaatac
    18781 atttatagaa ttcttggaaa agaagggcga aatttaagag gagaaatact tcctttaaat
    18841 ccaatagatt ttcttgataa tccttttgtt ataaaagatg aaagcattta cacagaagaa
    18901 ttagaagata gaatcaaata ttttagtgcg cattatgggt ttttaaataa agataatata
    18961 ggatattgga ttacaaacga tttaaaatta tcacaagtag gactcaaaac aaccggttca
    19021 atcaaaacaa gtatcaatga aaacgtaaat ctagaaatca ctaattttga cataaatgat
    19081 gatgctatta aatcaggtat tgtaaatgtt caagcttcag atataaaagt aaatggtagc
    19141 gttggagcaa caaaactcta tggaaaaaat atcagcatta aaggtttaac tcatgccaaa
    19201 agcgaaattt ttgcacaaaa tatttttatt acaacgcata aaggaacttt acaagctgat
    19261 actgtgtata taaaaaattt agaaaatgga atagttgtag ccaaaaatgt ttttgttgaa
    19321 aactgtatag gcggaaaaat agaagcggag aatatttata tttgcaattt attaacagat
    19381 aataccttat atcctaagaa aaatctaatc ataacaaata atttaaaatt taaaaacaat
    19441 atcttagttt ctccgttagt ttctatcaac aatcactcaa gtatagaaag tgcagaatgt
    19501 gaaaatctta aaaatctcgg tcttaaaatt aaaagcaagc ttgataatgt tataagcaaa
    19561 atgcaaaact attatgatta tttaatcaaa aatcaaatca atatcatcaa aattcaaaaa
    19621 actgaaaatc ctagtgctat agaaatgaaa ttttcaaatc tttatcatga tattataaaa
    19681 aaatacaatg acattagtat ctcgtataaa aaacttataa aattaaaata tcaagttgat
    19741 acaaagttaa attttttaga tgaaatggtt tataatgtaa aaatatacat aaaagctgaa
    19801 aatatcggag aagataattt tttgaaattt tatccaaaaa taaacactaa tgatgaacta
    19861 aaacatcata taaatttaaa agattatgaa aaagttttat atcttgaaaa aggacaacaa
    19921 gtaaatttta ttacatcaga taattatgaa caaaacgata ttgaagaaat taaagctctt
    19981 tttgaaaaac tagaaaaaga taattcctaa gaattatctt ttcatattaa tagccttttg
    20041 tatcatttga tcacttgttg tgatactttt tgaacttgcg tcaaaggctt tttgggttac
    20101 aataagattt gaaagctcta cgcttaaatc aacatttgat tgctctaaaa atccaccttt
    20161 aaatttagcc gtattaacaa tttgaccatt tttcataata aaacttgcat tgccactatt
    20221 tgctgttgca gcaaaaatat tatcacccat agcagctaat ccttgctcat taataaaatt
    20281 atacaaagca agctttccaa ctatagcatt tttaccattg ctaaattgtg caataatact
    20341 tccatcatca gatatattgt attgtttaaa aaatccttcc gctaccccat cttgttgtgt
    20401 aactacattt ttttcaacac cttctttaat ataaattccg ccatagcctg aacctggctt
    20461 actagcatca taaggcgttc ctaaatcaat attaattgtt ccaccatttg gatttgcaat
    20521 gcttgtaata ttattttgaa gtaaggcacc atttttatca aaaaccatat ttccttcagt
    20581 tggatcacca acagcatttc cattggaatc ataaatttga gcaatggctt tatattgtat
    20641 attatcacct tcttgtggca aaactctttc aagtaaaacc cttagagtgc ttttacttcc
    20701 atctgcatta taaatatcag attctaaaat atctttattg gctttttgtt gctctgttgc
    20761 aatttgtact gtatcaagct tgatactatt ttcatctaaa ccttttaaat caagtttatt
    20821 gcttttaaaa tttaaatttt catctaaagt tgcttcaaag cttgttttta ctccattatc
    20881 atctgtgaaa tttaaaataa tcctatcacc tgctttagcg ctaaatacat cttctttact
    20941 cacacttcca ttaactacat attttccatc ttcagttttt gtaatattaa atttattagg
    21001 atcaagattt actttaacca cttctgttgt tgtattagta tttaaacttc cactccattt
    21061 tacattttga gttacttgag gaggtaaata catattcaca gggaccttga tagcctgttg
    21121 agaagcagtt gtacctatac taaaagaatc atttgaattt actgtaaaac cattgtttac
    21181 aggagttcct gtgttaagat aatcccccat aagtcctgca actctatcac tataattgat
    21241 accagtaaaa gcaggattca tcgttcctaa aacaaaattt ccataagaat ctactaaata
    21301 cccattagca tctcttttaa aagttccatt tctagtataa taagcattat tatcagcccc
    21361 taaaactcca aaaaatcctt ttccttgcaa agccacatca aattcactat cgcttgctac
    21421 aaaagaacct tgctcaaaaa caacattgga agaagccgac cctgaaccat atccaccttg
    21481 agcaggattg gttgattgag tagttacggt gctataaaaa atatctttaa attgagcatc
    21541 agaatactta aaacccgttg tattaacatt agcaatatta tttgcataaa tatcaatgcc
    21601 aaagctattt gttttaactc cagaaacccc gttataaaat gaattcatca taatttatgc
    21661 cttttcttct ttatcacctt cttctgtaga tccagaagaa tttccactac tagaatctgc
    21721 acttgaacta tctccaacag aagttgaaga tgatccaaat ttatagtcgc taatttcacc
    21781 aatatcatca aaacttacat attggccacc catttttgca taagcaactc catcaacaaa
    21841 tttaataccc tctataggat aagtcccata atttgcagtg atcttttctc catttttatt
    21901 attataaacc accttaacgc tatattctcc gttgcctgca taaacaccat cattatttct
    21961 accaggccac tctaatgtga ataaaccctt tgatacttct tttccttcat tgcttttttc
    22021 actaaatact aacttattat ttttatcata aacctctaga gtaattcctt tgttatctga
    22081 atcttcaggc aaatacattt taagcgcaat aacctcatcc gcacccgtta atttaacttt
    22141 attttcattt actgtcgcca tttttcctat agctccaacc gcggcagtac tcatgcttgt
    22201 actaaaagaa ttagaaagtt tttccatagt ttcaaccatt ttttgcatag tgatattagt
    22261 attttgttgc atttcaagcg cactaagttg tgaagtttga gtaagcattt tatcactatc
    22321 cataggatct gttggatctt gatgctgaag ctctatcaaa agaagtttta aaaacgcatc
    22381 cttatctaaa gtagcatttg ggttgctaac tacacctgaa ctactgctat tagatgaatt
    22441 atccgcttta gtagtcttat cacttgtttg agtatttgtc cagttaagat tattattcca
    22501 atttgttgtt gtcatgataa aatccttttt ttatatcaaa ttttttaatt aaaagcaaaa
    22561 agcgttccaa tttagaaata ttttgccaaa acaagctcta aattaatttt ttcaccttca
    22621 ttttttccat ctaaagcatc tttgaaacta tatctgctac gattttttcc ttgattttga
    22681 ttttgctctc ttttcccttg atcgctaaaa ttcatttcaa gtcctgtaaa tcccatattc
    22741 acaagagaat ttttaaattc tgtttgattt tggataaaca aattcattgc attggtattg
    22801 gagttaaaat taatgtgaag attattgcct ctttgaatca aagttacttc tacttcacca
    22861 agattattag gatttagtgt aatactaagc tttgtaatcg gtgctttata ttgttctaca
    22921 gcctctttta aatcttgaga aaaatgttgc aaggtttctt taggagtaat atttcgagta
    22981 ttattttgca ttactttgtt taaatctttc actaaagaat ttaactcatc taagctattt
    23041 tgatctatat tttcaccgtg tgtttgttct tgaataaaaa tttctttatg ggtgttattg
    23101 ttaaaattag tattattctc tttggtttga accacttgag ttttatttaa attttcaaaa
    23161 tttaattttt gttcaaagag gttttgtttt gtatctttgt tttctttgtt gtttttagtc
    23221 tccttagtta gactaaaatc tttttgtgtt aaattttgat cgttgttctt taaattttta
    23281 tcttgcatat tttcttgatt taaattattt ttttcctgat ttttattcaa ctctttgtta
    23341 aaatctttca aattatcttt attcaattct ttttcatta
//
LOCUS       DAPWAA010000022        22974 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.022, whole genome shotgun sequence.
ACCESSION   DAPWAA010000022 DAPWAA010000000
VERSION     DAPWAA010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22974
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.022"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            47..1363
                     /locus_tag="RTF91_000797"
     CDS             47..1363
                     /locus_tag="RTF91_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDZ4943703.1"
                     /translation="MAKKQLSLTKLSVPIFWDLLSKYLTVIINTAMVSHYSNFLVGAM
                     GAGNQILDLFITIFLFLSVGCSIVLAQAIGARDHVLARKVIHQSLFLNALLGFVCGAL
                     ILWHGEYLLYLLKIPQELLKDSKIYLHMLAICLFFDAIGIVLAAIVRVYNMAYWVMLI
                     GFLMDVVVICGNYYVLHYTKLELFGVGLSNIFARIVAIVALFAILFYKLKIHLKIKEM
                     IQLEKEVLKKVLNIGGFSAGENLLWIVQYTIAFAFVASLGEASLSVQTIYFQISLLIM
                     LIGQATSIANEIIVGKLVGARYENIAYKHAWSALYFSVIASAFVALLNYLCQDFTMQI
                     LGLKEELKNLMIPLFTLSIFLEISRTFNIVMVNSLRASGDAKFPFFSGLVFMMGVSLP
                     VGYVLCFHFNLGILGVWIGFCADEFLRGMVNSYRWKSKKWQGKALV"
     gene            1339..1986
                     /locus_tag="RTF91_000798"
     CDS             1339..1986
                     /locus_tag="RTF91_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDZ4943704.1"
                     /translation="MARQSSSLKSFIYKDECYFYTKKRIKSLRLRLNEKGEFVLSIPY
                     FCAFKSVYEFLDKSSVWISETKKRFHKKALKDDELIFLAKKYKIIFDENVKKTYFDKD
                     KIVSIDKVRLDLFLRQNAKKIFSFYLKKWSKKTGLLCTHLSIKTMKTRWGSCNYNKAY
                     INLNLKLLQKSLKAIDYVILHEISHLKFPNHSKEFYAFIEYFMSDFRQREKEFLS"
     gene            2029..3549
                     /locus_tag="RTF91_000799"
     CDS             2029..3549
                     /locus_tag="RTF91_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943705.1"
                     /translation="MTLDFDFIYSADNDIFEYLLHFYARNYNYNFIKQDNIYHFSIDA
                     DEANLKTFCDSLNLMSYSVFLKKFDVKAGQNFSLFALEDKEFSKFSYITHLNSNAYQE
                     KKILNKNEWEVFCECEFSSNLSEFEKINEDNFNTFLKLAFDLLTGEKSIYLKDKNGIY
                     EFSLFKNDFTGDFLLPCDIKAINLVFVCSNENLKLLASLEKPLMKLRLNAMFRKNHNL
                     DFNDFKIRLARDLFSFALGLKLFENEYKFLSVKKIEEYQKDFYISALDDQVVVLEGFE
                     FINAKAKELIFSKEDKNMARISYLVSRYKEKAFILELSKDYEDILLINKELNLLNLSL
                     PKHSKELYDEIKKDETGVRLLENFAKEFPLLDESFELKNNFYSLLGLVARVLNLGKNL
                     QESANELLKIADESKMPRGVKIDYRLKADKSFDYARTLRSAMSFMLAGVDSANIAYGA
                     VESLAYFLRDTYDELREKKQSELALISGSLFEHKSLLKNTLKHLKNCQLSDVPLRI"
     gene            3530..5716
                     /gene="hypF"
                     /locus_tag="RTF91_000800"
     CDS             3530..5716
                     /gene="hypF"
                     /locus_tag="RTF91_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HDZ4943706.1"
                     /translation="MCHLGYKIKISGLVQGVGFRPLVYELALKLKFFGEVRNDGFGVE
                     IILACTHKECEIFIENLKNHLPPLARMDQLVITQISIPNYTNFSITSSLQNAKSTPML
                     SDFALCKECKKEFFDEKNPRFLYPFITCTHCGPRFSIIKSLPYDRSNTSMQELFMCEF
                     CKSEYEDPKNRRFHAQPISCPKCKISVFLKSQKGKILARDQEAFIQSAKLLKEGKILA
                     IKGMGGFHLMCDAFNEESLKALRLRKNRPKKPFALMCKGLQNAKELAFIDEKEEALLS
                     GVLAPIVILKAKKALSLIAPDIDKIGIMLAYTPLHLLIFEYFKGSLVATSANLSGESI
                     IKDEVNLCQKLDGVFDFYLDYDREIINASDDSIAQVIKGETMFLRTSRGLNPFYLERK
                     FDKKGTFLALGAELKNEFVIFYENKLLISPYIGDLKSLDVHERFFKLLEFFKQNYDLK
                     FDTILCDKHPHFSYAKEFENRVKISHHYAHFCAAYFEYEKEFLKDEKALAFICDGTGY
                     GEDGKIWGGEVFVGNLKEYERVAHFENFTLINSDIKNIQNLALSLIFHYDLEDKAREF
                     LAKIPKIKLENLKKIYSHSKLQTSSLGRIIDAFGSIVFGLEKSSYEAQVGLMCEAFYD
                     KNLDFSYELFVEKEQIDFKSLILGALQDEKSKAVTGMFNALANFIISFSKDYDLKVLL
                     SGGVFQNKTLLEILKAKNFDFFVPLKYPCNDSSIALGQMVHYLKKE"
     gene            5789..6529
                     /gene="hypB"
                     /locus_tag="RTF91_000801"
     CDS             5789..6529
                     /gene="hypB"
                     /locus_tag="RTF91_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HDZ4943707.1"
                     /translation="MCKDCGCSINSIHTHDHHHDHHENPSLKESKTIEVISKILSKND
                     DEAKHNRAHFNETNTLCINLMSSPGSGKTTLLESTIKALKNELKIAVIEGDLETNNDA
                     LRVKNAGALAYQITTGQSCHLDAFMVHEALHHLAIKDVDLLFIENVGNLVCPASYDLG
                     EHLNVVLLSVTEGSDKPQKYPVMFKKADIVLITKADLAHHFDFDVKEATKLIKELNPR
                     VDIITLDAKNGTNMELWYKVLKLKKELF"
     gene            6529..6810
                     /locus_tag="RTF91_000802"
     CDS             6529..6810
                     /locus_tag="RTF91_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HDZ4943708.1"
                     /translation="MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYV
                     LIHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIKSDEGDLGLNEFYR"
     gene            6794..7885
                     /gene="hypD"
                     /locus_tag="RTF91_000803"
     CDS             6794..7885
                     /gene="hypD"
                     /locus_tag="RTF91_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HDZ4943709.1"
                     /translation="MNFIDEFRDKESILALKKLIEQELKNPINIMEICGGHTHSIMKY
                     ALPSILPKEINFIHGPGCPVCVMPRERIDTAIKLASMKDTIFCTLGDLLRVPGSEISL
                     LDLRAKGADVRALYSPLEVLEIAKQNLDKNIIFFAIGFETTTPMSALLLEKVIEERLN
                     NVFFHINHITVPAPVEVIMNDENVKINAFLGPSHVSVITGYGIYEPLAEKFKTPIAVS
                     GFEPVDILESVLNVIKQSNEGTFKVYNQYKRAVSKEGNVKAQNLVKKYFKVCDFEFRG
                     LGLIKEGGLALKEEFSVYDASKKFDCAVQSKNESKACICGQILRGLAKPNDCKVFGKA
                     CTPRSPIGSCMVSGEGACAAYYKYSKVNV"
     gene            7882..8856
                     /gene="hypE"
                     /locus_tag="RTF91_000804"
     CDS             7882..8856
                     /gene="hypE"
                     /locus_tag="RTF91_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HDZ4943710.1"
                     /translation="MKNISLAHGGGGEEMNELLTKLFKIFDNEILNASNDAAILGNLA
                     LSTDSFVLSPIFLDEEINIGKLCVCGSINDVLMVGAKPKYLSLGLILEEGFELEKLER
                     ILKSIKEECEKCGIMLVCGDTKVVPKGKGDEIYINTTVLGEIIAKKESKNIKAGLSIL
                     LSGDIGRHGASVLIKRNELEADIKSDCKALDKEVLELLEKGVKVVAMRDATRGGLSAV
                     LNEWAKQSTNDLLIFEEKIIVQDEVLGLCELFGYEAYELANEGTFILCVEKEDELKAL
                     EILKKYNANASIIGEVLEEKKARVVLQNAYGAKRFLESPKGELLPRIC"
     gene            8856..9200
                     /gene="hypA"
                     /locus_tag="RTF91_000805"
     CDS             8856..9200
                     /gene="hypA"
                     /locus_tag="RTF91_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HDZ4943711.1"
                     /translation="MHELSIVESLIELCEENALNNNAKSVQEIYVKIGRLSGIEVNLF
                     KRCYETFKENSNLCKNAKLFIEFAPLEILCLKCDQKSILEENVFKCPKCKSIEYKIAQ
                     GEDLHLMRLVME"
     gene            complement(9224..10266)
                     /locus_tag="RTF91_000806"
                     /pseudo
     CDS             complement(9224..10266)
                     /locus_tag="RTF91_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799865.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction enzyme HsdR N-terminal
                     domain-containing protein"
     gene            complement(10357..11322)
                     /locus_tag="RTF91_000807"
     CDS             complement(10357..11322)
                     /locus_tag="RTF91_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDZ4943712.1"
                     /translation="MYRKDLQTLLYKDSMPNFFFLYGADNFQNELYTEFIKEKYQVDE
                     TLKLFFEEYSFARASDFLSGGSLFSEKKLLEIKTSKKIPTKDLKILVDLCKNNTDNFF
                     LLELYDENSKQSDIEKVFSPHFVRFFKVNGAREGVELLSIKAKQLGVEITQNALFTLF
                     TSFDENLYLAVSELNKFSGLRVDEKTIEQYCYSLNTGSFESFFEKILKKQDFKSELEK
                     ILDNFNEIALINSLYNSFYRLFKITLYAKVNGKIDFKELLGYTPPPQVGQNLSTQAFS
                     LKIEQYKEIFTLLLKSEYELKTNSKLVKKEFLISNLLKLARILKS"
     gene            complement(11315..13249)
                     /locus_tag="RTF91_000808"
     CDS             complement(11315..13249)
                     /locus_tag="RTF91_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HDZ4943713.1"
                     /translation="MKEFLNSLNYGISSHEVNNEFKQILRELLVNHIIKEHKNKYYLN
                     NGFTFGVLDISSKGIGFLKCFDESFKKDLLIENKNLKGANYKDIIAVKLLPLKKKRPS
                     AKVILVLKRANETSLVITKKYSETVLGMNIKTGLSTALKASQKSLKTLPLGTILKIEN
                     ENNNIIEVLGHIDDENVDEKISLALFNKNNEFSDACIKEALANGNSVDASMYENRIDL
                     RALPFCTIDPAHAKDFDDAIYFDTQKREIYVAIADVSEYVYAYSAIDKEARNRGFSIY
                     FPHIAIPMLPRHLSENICSLKPNLDRLAYCFKITLNHECKVMKEELFEGIINSKRRFN
                     YDEVDEILVQKPDLKEFSWLYKLFEITKNLRKMRLKNAFEFRTEELRMNLDENLSLKS
                     TVFEKDTPSHNLIEDCMLLANKAAAKLIDIGVFRNHLSIDAKKIDKLLNELRELGIDV
                     NFKANLPELIRDIQALANELSLRAEVDKLIIKAQKKAEYSSINAGHFGLGFDKYSHFT
                     SPIRRYSDLILHRLLKAKQKNDEKLFNYLLLNIENTCQSLSTLEREADKVAFDFMDRK
                     FARWASKNIGKKFKALIVQNDGVCIAKLDDEIRGADLILYDTRVNLLENVEVQIVEAD
                     IVMAKIYAKITQRLKKEENV"
     gene            13368..14390
                     /gene="ilvC"
                     /locus_tag="RTF91_000809"
     CDS             13368..14390
                     /gene="ilvC"
                     /locus_tag="RTF91_000809"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDZ4943714.1"
                     /translation="MAITVYYDKDCDLNLIKSKKVAIIGFGSQGHAHAMNLRDNGVNV
                     IIGLREGSASAIKAKNAGFEVMSVSGVSKAADVIMILAPDEIQSDIFNVEIKPNLSEG
                     KAIAFAHGFNIHYGQIVVPKGVDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESK
                     NAKNLALSYASAIGGGRTGIIETTFKAEAETDLFGEQAVLCGGLSALIQAGFETLVEA
                     GYEPEMAYFECLHEMKLIVDLIYQGGIADMRYSISNTAEYGDYITGPKIITEETKKAM
                     KGVLKDIQNGVFAKDFILERRAGFARMHAERKNMNDSLIEKTGRNLRAMMPWISAKKL
                     VDKDKN"
     gene            14394..15479
                     /locus_tag="RTF91_000810"
     CDS             14394..15479
                     /locus_tag="RTF91_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HDZ4943715.1"
                     /translation="MSKKKLVQIQRYLIIAILFLLCIALALGILIKYQDSQNITQINT
                     TNIVKEDEIKTPSIFKDHVDKIDVFRYVEIFDQNIENNHSIGILDQKMQEIDDLNTSL
                     NEQNLSNADQNLTQNQNFILKDENLTQEQNLTFAEDINLNKNSKKPKLAIIIDDMANA
                     NQVRGLKALNLKLNPSFFPPDKNHSETPKLALKFDFYMVHLPLAAINYNKPELDTLNP
                     NDSKERILKKIKQIKKDFKNLRYINNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKT
                     IGNSKANKIAKELSIPYIQRDVFLDNEDDVNYVKKQLKSAVELAQKKGFAIAIGHPRK
                     NTFKALEQSKDLLKSVELVYLSEIYGK"
     gene            15469..16242
                     /locus_tag="RTF91_000811"
     CDS             15469..16242
                     /locus_tag="RTF91_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDZ4943716.1"
                     /translation="MASEILPNEFLELFKDLKKPPKKLHYKGDLSLLKQDKIAIIGSR
                     RMSIYTKNCVFSLANMLKNAHLCVVSGGALGVDITASMAAIPNTIGIFANGLGQIYPK
                     GNEKIIKQIYENALALSEYKDDYLPKNYDFLLRNRLVVALSKAVVVAQADIKSGSMQS
                     ARLALELNKPLYVLPQRFQESTGTNLLLKENKAKLICDFKEFVSEFASIDINKDEFLE
                     FCKKGVSVDEAFKIYGQKVYEYELEGKISIEGLFIRVLI"
     gene            16239..16622
                     /gene="ruvX"
                     /locus_tag="RTF91_000812"
     CDS             16239..16622
                     /gene="ruvX"
                     /locus_tag="RTF91_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDZ4943717.1"
                     /translation="MKALALDVGLKRIGVALCVDKKIALPLNAVLRKNRNQAASEIKN
                     LLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLEFDKEICFIDESGTSKEALKYGV
                     ANARKKDGKLDSLAAFIMIKDYFAL"
     gene            16651..17490
                     /locus_tag="RTF91_000813"
     CDS             16651..17490
                     /locus_tag="RTF91_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HDZ4943718.1"
                     /translation="MQNILSSFAQEKNVCVFVNTLKSSVKELEEEFLKQGLKFRKINT
                     YCYLFEAKDKVILSSMKAFNEFKFYIQNYSSYLCALNLEVKAGQSVLDICAAPGGKSI
                     NLANFMQNTGYLACNELSKDRFFTLQKNLKNYGVNAKIFMKNGKNIGNLCPLKFDKIL
                     LDAPCSTFAKIGFDLEKSYQEIKNIAKTQKKLLHSALKALKIGGELVYSTCTFTKEEN
                     EEVIENALKSEFKLELLDIDLEDVQAKAGHSEEFVEISKCRRILPSLDYDGFFIAKLR
                     KLR"
     gene            complement(17665..18162)
                     /gene="msrA"
                     /locus_tag="RTF91_000814"
     CDS             complement(17665..18162)
                     /gene="msrA"
                     /locus_tag="RTF91_000814"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDZ4943719.1"
                     /translation="MKNIILGGGCFWCIEAVFERVRGVINTEVGYSGGNPNPSYESVC
                     NGDGNIEVVKIKYNEKQISLLEILTLFFKIHDPTSIDRQGADIGIQYRSIIFYENEED
                     RILAQNFIEEQQKIFSKKIVTKISKLQTYYKAENYHQHYFTNNPNQGYCQAVIIPKLQ
                     KIQSD"
     gene            complement(18197..18715)
                     /gene="ppa"
                     /locus_tag="RTF91_000815"
     CDS             complement(18197..18715)
                     /gene="ppa"
                     /locus_tag="RTF91_000815"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDZ4943720.1"
                     /translation="MDLSKIKIGDIPNKINAVIEIPYGSNIKYEIDKDSGAIMVDRVM
                     ASAMFYPANYGFIANTLADDGDPVDILVLNEYPIQAGAVIPCRLIGVLIMEDESGMDE
                     KLLAVPNLKIDARYDSIKTYTDLPQATLNKIKNFFETYKILEPNKWVKVQDFKDEKAA
                     IEILEKAIKNYK"
     gene            complement(18725..19303)
                     /locus_tag="RTF91_000816"
     CDS             complement(18725..19303)
                     /locus_tag="RTF91_000816"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDZ4943721.1"
                     /translation="MKELFLIIGAPGSGKTTDASLIAQADATNITHYSTGDLLRAEVA
                     SGSELGKTIDGFISKGNLVPLDVVINAIVSALKAAPTKTIIIDGYPRNVEQMMEFDKV
                     LNEQNEVCLKGVIEVRVSEEVAKERVLGRNRGIDDNEEVFYNRMKVYTEPLNEILDFY
                     QKKKLHFIIDGERTIEPIVADMKELIKKIQSI"
     gene            complement(19300..21051)
                     /gene="aspS"
                     /locus_tag="RTF91_000817"
     CDS             complement(19300..21051)
                     /gene="aspS"
                     /locus_tag="RTF91_000817"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDZ4943722.1"
                     /translation="MRSHYNTDLGISHVGQNIKLCGWVNSYRDHGGVIFIDLRDRSGI
                     IQLVCDPNDSKQAHEIASNARNEFVLIVEGIIRPRGEGLVNPKLKTGEIEVVVSKLII
                     ENESAVPPFTIADESVNEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLASMGFL
                     EVETPILTKATPEGARDYLVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCF
                     RDEDLRADRQPEFTQIDVEMSFCEQKDVINVAENFLKDIFKACGKEIQTPFRQMRYKD
                     AIENYGSDKPDLRFDLKFIDVIDIFAKSNNEIFANIAKDIKKNRIKAIRVPKGDTIFS
                     KRQMQRFEEFVRKFGAQGLAFIQVKEDGLKGPLCKFFSEEDLNELSKRCELEVGDVVF
                     FGAGTKKTVLDYMGRFRIFLANELNLIDPNALEFLWVVDFPMFEQNDDGSYSAMHHPF
                     TMPKNIDENDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQREK
                     FGFLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIREVIAFPKTQKAQCLMTDAPSPA
                     SNEAMRELGIKLRENIK"
     gene            21143..22003
                     /locus_tag="RTF91_000818"
     CDS             21143..22003
                     /locus_tag="RTF91_000818"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HDZ4943723.1"
                     /translation="MQNKIDYKNVKKIGLVTRPNVSLDKEILKLQSILFIYKVELVLF
                     KESSKILDLPKYELDDLFKISDFVISLGGDGTLISLCRKACEYDKAVLGIHAGHLGFL
                     TDFKVDESENFFQAFFQGEFRIEKPYLLSVFLEDKQGKILEKLAFNDVVISKDNKVSM
                     AHIEVFRKEKKFNEYFGDGLIVATPAGSTAYNLSANGPIVYTLAQAFILTPVCSHSLT
                     QRPIVLPKGFEIEIMAKDCMLCIDGQENYKMNDFKSIKVGLSDKNVALIHPKNRDYFQ
                     ILKEKLHWGN"
     gene            22003..>22974
                     /locus_tag="RTF91_000819"
     CDS             22003..>22974
                     /locus_tag="RTF91_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RecN"
                     /protein_id="HDZ4943724.1"
                     /translation="MINRIFMKENLGFKKAELEISKGFTVFTGLSGAGKSVLFKGILS
                     AFSLSESEAKIVEIELDDELDLESFGIESEKENVFKLLKEKSTKYFINNQSIAKKSLQ
                     NLSKTFIKYLSPKENNEFENEKFLNLLDILEIQENANFISFLEDFKKDFNAYSQISND
                     LNVILEEEKKVEELKELTRVQIEKISSINPKIGEYEELLTLKKKLSKKDKLEEAWSKA
                     ERIFEFEKVVIEALNLSEVDASFFSECLNELRVICENQKMEDLDFDVETLLDRIEKLS
                     YLIKRYESIENALEILTQKKHELEHYENISFEKKELEKKFQKLKQKLE"
BASE COUNT         7860 a         2988 c         3942 g         8184 t
ORIGIN      
        1 agtaaaatta ctttttactt ttaacattat catcaaaaga gtatttatgg caaaaaaaca
       61 actctcccta acaaagctta gtgttcctat tttttgggat ttgctttcta aatatttaac
      121 cgtgattatc aataccgcta tggtatcgca ttattctaat tttcttgtgg gtgctatggg
      181 ggctggaaat caaattttag atctttttat tactattttt ttatttttaa gcgtgggttg
      241 tagtatagtg cttgctcagg cgattggagc aagagatcat gttttagcaa gaaaggtgat
      301 tcatcaaagt ttgtttttaa atgcactttt gggttttgtg tgcggtgcac ttattttgtg
      361 gcacggggag tatttacttt atcttttaaa aatcccgcaa gaattgctta aagatagcaa
      421 aatttattta catatgcttg caatttgttt attttttgac gctataggta ttgttttagc
      481 agccattgta agggtttata atatggctta ttgggtaatg cttataggct ttttgatgga
      541 tgtggtagta atttgtggaa attattatgt tttgcattat acaaaattag aactttttgg
      601 agtggggctt agtaatattt ttgctcgtat tgttgctata gttgccttgt tcgcgatact
      661 tttttataag cttaaaattc atcttaaaat caaagaaatg attcaacttg aaaaagaagt
      721 tttaaaaaag gttttaaata taggtggatt ttcagctgga gaaaatcttt tatggatagt
      781 gcaatatacc atagcttttg cttttgtggc gagtttgggt gaggcgagtt tgagtgtgca
      841 aacgatttat tttcaaattt cgttgcttat catgcttata ggacaagcta cgagtatagc
      901 taatgagatc atagtaggta aattagtcgg tgctagatat gaaaatatcg cctataaaca
      961 tgcttggagt gctttatatt ttagcgtgat agcgagtgct tttgtggcac ttttaaacta
     1021 tctttgtcaa gattttacta tgcaaatttt agggcttaaa gaagagttga aaaatttaat
     1081 gataccttta tttactcttt caatctttct tgaaatttca cgcacattta atatagttat
     1141 ggttaattct ttgcgtgcaa gcggtgatgc gaaatttccg ttttttagcg gacttgtttt
     1201 tatgatggga gtatccttac cagtaggcta tgtgctttgt tttcatttta atcttgggat
     1261 tttaggtgtt tggataggtt tttgtgcaga tgagtttttg cgtggaatgg taaattcata
     1321 cagatggaaa agtaaaaaat ggcaaggcaa agctctagtt taaaatcttt tatttataaa
     1381 gatgagtgct atttttacac taaaaaacgc ataaaaagtt taagattaag gttaaatgaa
     1441 aaaggcgaat ttgttcttag tatcccttat ttttgtgctt ttaaaagcgt ttatgaattt
     1501 ttagataaat caagtgtttg gataagcgag actaaaaaaa gatttcacaa aaaagcttta
     1561 aaagatgatg agttaatctt tttggctaaa aaatataaaa ttatttttga tgaaaatgtc
     1621 aaaaaaactt attttgataa agataagatt gtttctatag ataaagtaag attagattta
     1681 tttttaaggc aaaatgctaa aaagattttt agcttttatc ttaaaaaatg gagtaaaaaa
     1741 acaggcttat tgtgtacgca tttaagcatt aaaactatga aaacacgttg gggttcttgt
     1801 aattataata aagcttatat taatttaaat ttaaaacttt tgcaaaagag tttaaaggct
     1861 attgattatg taattttgca cgaaataagt catttaaaat ttccaaacca cagtaaggaa
     1921 ttttatgctt ttattgagta ttttatgagc gattttagac aaagagagaa agaattttta
     1981 agttaaaaat gttatattta tagttcatct ttcaaaaaaa ggcataatat gactttagat
     2041 tttgatttta tttatagcgc ggataatgat atttttgaat atttattgca tttttatgcg
     2101 agaaattata attataattt tataaaacaa gataatattt atcatttttc tattgatgca
     2161 gatgaagcaa atttaaagac tttttgtgat tctttaaatt taatgagcta tagtgttttt
     2221 ttgaaaaaat ttgatgtaaa agcgggacaa aattttagcc tttttgcact agaagataaa
     2281 gaattttcaa aattttctta tatcacgcat ctaaattcta atgcttatca agaaaaaaaa
     2341 attttaaata aaaacgaatg ggaagtgttt tgtgagtgtg aattttcaag taatttatca
     2401 gaatttgaaa aaatcaatga agacaatttc aatacttttt taaaacttgc ttttgatttg
     2461 ctaactggag aaaaaagcat ttatttaaaa gataaaaatg gcatttatga attttcttta
     2521 tttaagaacg attttacggg agattttttg cttccttgtg atattaaggc tataaattta
     2581 gtttttgttt gttcaaatga aaatttaaaa cttcttgcaa gcttggaaaa acctttaatg
     2641 aaattaagac ttaatgctat gtttagaaaa aatcataatc ttgattttaa tgatttcaaa
     2701 ataagacttg ctagggattt gttttccttt gctttagggt taaagctttt tgaaaatgaa
     2761 tataaatttt taagcgtgaa aaagatagaa gaataccaaa aagattttta tattagcgct
     2821 ttagatgatc aagtagtggt tttagaaggc tttgaattta tcaatgctaa ggcaaaagag
     2881 cttatttttt ctaaagaaga taaaaatatg gcaagaattt cttatcttgt gagccgttat
     2941 aaagaaaagg cttttatttt agagcttagc aaagattatg aagatatttt gcttataaat
     3001 aaagaactta atttacttaa tctttcctta ccaaaacata gcaaagaact ttatgatgag
     3061 attaaaaaag atgaaaccgg tgtaagactt ttagaaaatt tcgctaaaga atttcctctt
     3121 ttagatgaaa gttttgaact taaaaacaat ttttattctt tgcttggttt ggtggctagg
     3181 gtgctaaatt tgggtaaaaa tttacaagaa tctgctaatg agcttttaaa aattgccgat
     3241 gagtcaaaaa tgcctcgtgg agtgaagatt gattatcgtt taaaagcaga taagagtttt
     3301 gattatgcta gaactttaag atctgctatg agttttatgc tagcaggagt agatagtgct
     3361 aatatcgctt atggagcggt tgagagtttg gcctatttct tgcgcgatac ttatgatgag
     3421 ttaagagaga aaaaacaaag tgaattagca cttataagcg gatctttgtt tgaacacaaa
     3481 tctttgctta aaaatactct aaaacatctt aaaaattgtc agctaagcga tgtgccactt
     3541 aggatataag ataaaaattt caggcttggt tcaaggggtg ggttttcgcc ctttggttta
     3601 tgaattagct ttgaaattaa aattctttgg agaggtaaga aatgatggtt ttggtgtaga
     3661 gatcatcctt gcttgcaccc acaaagaatg tgaaattttt atagaaaatt taaaaaatca
     3721 tctcccgcct ttagcaagaa tggatcagct tgtaattacg caaatttcca ttccaaacta
     3781 tacaaatttt agtattactt cttctttgca aaatgcaaaa agcactccta tgttaagtga
     3841 ttttgcactt tgtaaagagt gtaaaaaaga attttttgat gaaaaaaatc cacgcttttt
     3901 atatcctttt atcacttgca cgcattgtgg gccacgcttt agtatcataa aaagtcttcc
     3961 ttatgataga tctaatactt ctatgcaaga attatttatg tgtgagtttt gtaaaagcga
     4021 atacgaagat cctaaaaata ggcgttttca tgctcaacct ataagttgtc ctaaatgcaa
     4081 gattagcgtt tttcttaaaa gtcaaaaggg taaaatttta gctagagatc aagaagcttt
     4141 tatacaaagt gcgaagcttt taaaagaagg taaaatttta gctatcaaag gtatgggcgg
     4201 ttttcattta atgtgcgatg cttttaacga agagtcttta aaagctctaa ggcttagaaa
     4261 aaatcgtccc aaaaaaccct ttgctttgat gtgtaaaggt ttgcaaaatg ctaaagaact
     4321 tgcctttata gatgaaaaag aagaagcttt gttaagtgga gttttagctc ctattgtgat
     4381 tttaaaggcg aaaaaagccc tttctttaat cgcacctgac atcgataaga tcggaattat
     4441 gttagcttat acgcctttgc atcttttgat ttttgagtat tttaaaggaa gccttgtagc
     4501 aacgagtgcg aatttaagtg gagaaagtat cattaaagat gaggttaatt tgtgtcaaaa
     4561 acttgatgga gtttttgatt tttatttgga ttatgataga gaaattataa atgcaagtga
     4621 tgatagtatc gcccaggtga taaagggtga gactatgttt ttacgtactt caagggggtt
     4681 aaatcctttt tatttagaaa gaaaatttga taaaaaaggc acttttttag ccttaggcgc
     4741 ggagcttaaa aatgaatttg tgatttttta tgaaaacaag cttttgattt ctccttatat
     4801 aggggattta aaaagtcttg atgtgcatga gagatttttt aaacttttgg aattttttaa
     4861 acaaaattat gatttaaaat ttgatacaat tttgtgcgat aaacacccgc attttagcta
     4921 tgcgaaagag tttgaaaata gggttaaaat ttctcaccat tatgcgcatt tttgtgcggc
     4981 ttattttgaa tatgaaaaag agtttttaaa agatgaaaag gctttggctt ttatttgtga
     5041 tggaacaggt tatggagaag atggtaaaat ttggggtgga gaggtttttg taggaaattt
     5101 aaaagaatat gaacgagttg cgcattttga aaatttcacc cttataaata gcgatattaa
     5161 aaacatacaa aatttagctc taagtttaat ttttcattat gatttagaag ataaagctag
     5221 ggagttttta gcaaaaattc caaaaataaa acttgaaaat cttaaaaaaa tttactcaca
     5281 ttctaagcta caaacaagct ctttaggacg cattattgat gcttttggaa gtattgtttt
     5341 tggtttagaa aagagttctt atgaggctca agttggcttg atgtgtgaag ctttttatga
     5401 taaaaatctt gatttttctt atgaactttt tgtagaaaaa gagcagattg attttaaaag
     5461 cttgatttta ggagctttac aagatgaaaa aagtaaggcg gttacaggca tgtttaatgc
     5521 tttggcaaat tttatcataa gttttagcaa agattatgat ttaaaagtgc ttttaagtgg
     5581 aggggttttt caaaataaaa ccttgcttga aattttaaaa gctaaaaatt ttgatttttt
     5641 tgtgcctttg aaatatcctt gcaatgatag ctccatagct ttgggacaga tggtgcatta
     5701 tttaaaaaaa gagtgatttt atctttaaac tcataatttt ttaatacttt taaggttaaa
     5761 ataaaacaaa aattataaag gaaataaaat gtgtaaagat tgcggctgtt ctataaattc
     5821 aattcataca cacgatcatc atcatgatca tcatgaaaat ccaagtttaa aagaaagtaa
     5881 aactatagaa gtgatttcta aaattttaag caaaaatgat gatgaagcta agcacaatag
     5941 agcgcatttt aatgaaacta acacactttg tatcaattta atgagttctc caggtagtgg
     6001 aaaaaccacg cttttagaaa gtacgattaa agctttgaaa aatgagctta aaatcgctgt
     6061 gattgaaggg gatttggaaa caaataatga tgctttaagg gtgaaaaatg ccggagcttt
     6121 agcgtatcaa atcacaacag gacaaagttg tcatttagac gcttttatgg tgcatgaggc
     6181 tttgcatcac ttagcgatta aagatgtgga tttgcttttt atagaaaatg tgggaaattt
     6241 ggtttgtcct gcaagttacg atttgggaga gcatttaaat gtagttttgc tttctgtaac
     6301 cgaaggaagt gataagccgc aaaaatatcc tgtgatgttt aaaaaggctg atattgtttt
     6361 aatcacaaag gcagatttag cgcatcattt tgattttgat gttaaagagg caactaagct
     6421 tattaaagaa ttaaatccta gagtagatat tatcacactt gatgcaaaaa atggcactaa
     6481 tatggagctt tggtataaag tgcttaaact caaaaaggag cttttttaat gtgcttatct
     6541 ataccttctg aaattttaga aatcgatgaa ctaaataacg ctttagtgca aactttaggt
     6601 gtgaaaagaa aagtaaattt agatcttatt gatgagcctt taaaacaagg tgattatgtc
     6661 ttaatccatg taggcgttgc tatggaaaaa atcgacaaag aagccgcact agaaagcatt
     6721 aaaacctatc aagaaatagt ggaaaaaatg aatagcggag agataaaaag tgatgaagga
     6781 gatttaggtt taaatgaatt ttatcgatga atttagagat aaagaaagca ttttagcttt
     6841 aaaaaaactc attgaacaag aacttaaaaa tcctatcaat atcatggaaa tttgtggcgg
     6901 acatacgcat agcattatga aatatgctct accttctatc ttaccaaagg aaattaattt
     6961 tatccatggg ccagggtgtc cagtttgtgt gatgccaaga gaacgcattg atacggctat
     7021 taagcttgct tctatgaaag atacgatttt ttgtacctta ggagatcttt taagagtgcc
     7081 tggaagtgaa atttctttgc tagatttaag agcaaaaggg gctgatgtta gagcacttta
     7141 ttccccactt gaagttttag agatcgctaa gcaaaattta gataaaaaca tcatcttttt
     7201 tgctataggt tttgaaacca ctacgcctat gagtgcttta cttcttgaaa aagttataga
     7261 agagagatta aataatgtct tttttcatat caatcatatc actgttccag ctccggtgga
     7321 agtgattatg aatgatgaaa atgtaaaaat caatgctttt ttaggtcctt ctcatgtgag
     7381 cgtgattaca ggttatggca tttatgagcc tttagcggaa aagtttaaaa ctcctatagc
     7441 cgtgagtggc tttgagcctg tggatatttt agaaagtgtg ttaaatgtca taaaacaaag
     7501 caatgaaggc acttttaaag tgtataatca atacaaaaga gctgtaagca aagaaggcaa
     7561 tgttaaggcg caaaatttgg taaaaaaata ttttaaagtg tgtgattttg aattccgtgg
     7621 tttaggactt atcaaagagg gaggtttagc gctaaaagaa gaatttagtg tctatgatgc
     7681 gagtaaaaaa tttgattgtg ctgtgcaaag taaaaatgaa agcaaagcct gtatttgtgg
     7741 gcaaatttta agaggtttag ctaagcctaa tgattgtaag gtttttggca aggcttgtac
     7801 gccaagaagt cctataggaa gttgtatggt ttcaggtgag ggtgcttgtg cggcatatta
     7861 taaatactca aaggtgaatg tatgaaaaat atttccttag cccatggggg tggtggagaa
     7921 gagatgaatg agcttttaac taagcttttt aagatctttg ataatgaaat tttaaatgca
     7981 agtaatgatg cagcaatttt gggaaatttg gctttaagta cggattcttt tgttttaagt
     8041 ccgatttttt tagatgaaga gattaatatc ggcaaacttt gtgtttgtgg ttctattaat
     8101 gatgttttaa tggtaggtgc taagccaaaa tacctaagtt taggacttat tctagaagaa
     8161 ggttttgagc tagaaaaact agaacgcatt ttaaaaagta ttaaagaaga gtgtgaaaaa
     8221 tgtggaataa tgttagtttg tggcgatact aaagtcgtcc ctaaaggtaa aggagatgaa
     8281 atttatatca ataccaccgt cttaggagaa atcattgcta aaaaagagag taaaaatatc
     8341 aaagcagggc ttagcatact tctttcaggt gatataggaa gacatggggc tagtgtttta
     8401 atcaaaagaa atgagttaga agctgatata aaaagcgatt gtaaggcttt agataaagaa
     8461 gttttagagc ttttagaaaa aggcgtaaaa gtcgtagcta tgcgtgatgc tactcgtggg
     8521 ggacttagtg cggttttaaa cgaatgggca aagcaaagca cgaatgatct tttgattttt
     8581 gaagaaaaaa ttatcgttca agatgaagtt ttaggacttt gtgagctttt tggctatgaa
     8641 gcgtatgagc ttgccaacga aggcactttt atactttgtg tagaaaaaga agatgagtta
     8701 aaagccttag aaattctaaa aaaatacaat gcaaacgcga gtatcatagg cgaagtttta
     8761 gaagagaaaa aagcacgcgt ggttttacaa aatgcttatg gagccaaacg ctttttagaa
     8821 agccccaaag gcgagctttt accaagaatt tgctaatgca cgaattaagt atagtagagt
     8881 ctttaatcga actttgtgaa gaaaatgctt taaataacaa cgctaaaagc gtgcaagaaa
     8941 tttatgtaaa aattgggcgt ttaagcggta tagaagtgaa tctttttaag cgttgttatg
     9001 aaacttttaa agaaaattcc aatctttgta aaaatgctaa actttttata gaatttgccc
     9061 cgcttgaaat tttatgctta aaatgtgatc aaaaaagtat tttagaagaa aatgttttta
     9121 aatgtcctaa gtgtaaaagc atagaataca agatcgcaca aggtgaagac ttgcatctca
     9181 tgcgacttgt catggagtga aagtaaaaat cattttttga tttttacttt ctgctttcaa
     9241 atgctttgat aatatctgtt ttatattgat aaatatcttc tagtttttct atattataat
     9301 ttgctccatc tgggaaacta atagattttt tggctgtatt aaaatataat ctacatatcc
     9361 acttagtaac tttgccttga tataaaatac taaaataact taaagtatct ttgtagctta
     9421 catcttcaag attagcattg acactagcga ggattgattt tactatataa aagccctgta
     9481 attcttcttc tgttgtaaca atatctttac tttcatcgcg atttgctcat cattttcatc
     9541 atcgtttatg ttttgaagat tatttttaat acttgtgatt ttttcataag ctaaatcatt
     9601 gataatttct ttaaaagatt ttttaatata atttttaaat tcttctaaaa cagcactagt
     9661 cattcttttt tctgtcattt gcttagcaaa aaaacttgta aattcatcac ttggattttc
     9721 tatttcactt ttaaaaattt cttgtatact tcggtaatat tttttctcca tagcaatact
     9781 taaaatttca tctaaattta aatcagtgca aataaaacgt tttaaatctt taatatctct
     9841 aggtttaagt ttttcaagat taacaactaa aaatggtatt ttatccataa gattttgttg
     9901 ctcaatatct gtaaaaaatc tatattcaat accattggta agaatggcaa atttaatact
     9961 aggattagta ttaaaatatc ttacaagttg gttgttgtga ttatctaaat tttcagtatg
    10021 atttttagct tcaattaaaa taaaaggttt tgaatcttta aaaatagcat aatcaacctt
    10081 ttcacctttt ttagttccta tatctgcggt atattccggt acaacaatgc taggattaaa
    10141 aacatcataa cctagtgttt ttaatggcat tataaaagtc atttttgtag cttcttcggt
    10201 gtttacaagt gttttgcgtt cggctattgt ttcaacgata gcatttaatt gattttcaaa
    10261 atccattttt attccttttg tttttattaa agtattatgg caatattttt tagttttata
    10321 ataaaaaagt gattttaatt tttataattt cactatttaa ctttttaaaa tccttgcaag
    10381 tttgagtaaa tttgaaatca aaaattcttt ttttacgagc ttggaattag ttttaagctc
    10441 gtattcgctt ttaagcaaaa gagtgaaaat ttctttgtat tgttcgattt ttaaactaaa
    10501 ggcttgagtg cttaaatttt gtcctacttg tgggggtgga gtatagccta aaagttcttt
    10561 aaaatcaatt ttgccattaa ctttagcata aagtgtgatt ttaaacaagc gataaaaaga
    10621 attgtataaa gagttaatca aagcaatttc attaaaattg tctaaaattt tttcaagctc
    10681 gcttttaaag tcttgttttt ttaaaatttt ttcaaaaaag ctttcaaaac ttcctgtatt
    10741 taaactataa caatattgct ctatggtttt ttcatctact cttaagccgc taaatttatt
    10801 aagctcactc acagcaagat ataagttttc atcaaaactt gtaaaaagag taaacaaagc
    10861 attttgagtg atttcaactc ctagttgttt tgcctttatg cttaaaagtt ctacaccttc
    10921 tctagctcca ttgactttaa aaaatcttac aaaatgagga gagaaaactt tttctatatc
    10981 gctttgctta gagttttcat cataaagttc taaaagaaaa aaattatctg tattattttt
    11041 acaaaggtct actaaaattt taagatcttt tgttgggatt tttttagaag ttttaatttc
    11101 tagtaatttt ttttcactaa aaagcgatcc tccacttaaa aaatcacttg cacgagcaaa
    11161 actatattct tcaaaaaaaa gctttaaagt ttcatcaact tgatattttt cctttataaa
    11221 ttcagtataa agctcgtttt gaaaattatc cgctccataa agaaagaaaa aatttggcat
    11281 tgaatcttta taaagtaggg tttgaagatc ttttctatac attttcttcc tttttaagcc
    11341 tttgagtgat tttagcataa atttttgcca tgactatatc tgcttctacg atttgcactt
    11401 caacgttttc taataaattc acacgcgtat cataaaggat aagatcagcc cctctgattt
    11461 catcatctag tttagctatg caaactccat cattttgcac gatgagagct ttaaattttt
    11521 tacctatgtt tttactcgcc catctagcaa attttctatc cataaaatca aaagcaacct
    11581 tatcagcttc tctttcaagc gtgctaaggc tttgacaagt attttctatg tttaaaagta
    11641 gataattaaa aagtttttca tcgttttttt gtttggcttt taaaagtcta tgtaaaataa
    11701 gatcagaata tctgcgtata ggacttgtaa aatgtgagta tttgtcaaag cccaagccaa
    11761 aatgccctgc atttatgcta gaatattctg cttttttttg tgctttaatg atgagtttat
    11821 ctacttctgc tcttaaactt aactcattag ctaaggcttg tatgtcgcgt atgagttcag
    11881 gaagattggc tttgaaattc acatctattc caagttcgcg taattcattt aaaagtttat
    11941 cgattttttt tgcatcaata cttaggtgat ttctaaaaac gcctatgtct atgagttttg
    12001 cagcggcttt attggctaaa agcatgcaat cttcgattaa attatgcgaa ggagtgtctt
    12061 tttcaaaaac tgtgcttttt agactcagat tttcatctaa attcattctt agttcttcgg
    12121 tgcgaaattc aaaggcattt ttaagacgca ttttgcgtaa attttttgtg atttcaaaaa
    12181 gtttataaag ccatgaaaat tcttttaaat caggtttttg aactaaaatt tcatcgactt
    12241 catcgtaatt aaaacggcgt tttgagttga taataccttc aaaaagctct tctttcatga
    12301 ctttacactc atgattgagt gtgattttaa aacaatatgc caagcgatct aaattaggct
    12361 ttaaagaaca aatattttca ctcaaatggc gtggcaacat aggtatggca atatgtggaa
    12421 aataaatgga aaatccacga tttctagctt ctttatctat agcactataa gcataaacat
    12481 attcactaac atcagcaata gctacataaa tttcgcgttt ttgtgtgtca aaataaatcg
    12541 catcatcaaa atcttttgca tgtgcaggat ctatggtgca aaaaggtaaa gctcttaaat
    12601 ctatgcgatt ttcatacata cttgcatcaa cgctattgcc gtttgctaga gcttctttga
    12661 tgcaagcgtc gctaaattca ttatttttat taaaaagtgc taaagaaatt ttttcatcta
    12721 cgttttcatc atcgatatgt cctaaaactt ctatgatatt gttattttca ttttctattt
    12781 ttaaaattgt ccctaagggc aatgttttta aggatttttg agaggccttt aaggcagtgc
    12841 ttaatcctgt tttgatattc attccaagta cagtttcgct gtatttttta gtaattacca
    12901 aagaggtttc attggctctt tttaagacta aaattacctt tgcactaggg cgttttttct
    12961 ttaagggcaa aagctttacc gctattatat ctttatagtt tgcacctttt agatttttat
    13021 tttctattaa aagatctttt ttaaaacttt catcaaaaca ttttaaaaaa cctattcctt
    13081 tacttgaaat atcaagcact ccaaaggtaa agccattgtt aagatagtat ttgtttttgt
    13141 gttctttgat gatatgattg actagaagtt ctcttaaaat ttgtttgaat tcattattta
    13201 cttcatgaga gctaatgcca taattaagac tgtttaaaaa ttctttcact tttgatactt
    13261 tatgattttt tataaaattc ttgcataaag tttataaaaa aaatatgaaa tttatacttt
    13321 aattgttata atagcacctt taacttttga atttttaagg agtgattatg gctattacag
    13381 tatattatga taaagattgc gatttaaatt taatcaaatc aaaaaaagta gcaatcatag
    13441 gctttggctc tcaaggacac gctcatgcga tgaatttaag agataatggc gtaaatgtga
    13501 ttatcggact tcgtgaaggc agtgcaagtg ctattaaggc aaaaaatgct ggttttgagg
    13561 taatgagtgt aagtggggtt tctaaggcag cagatgtgat tatgatttta gctcctgatg
    13621 aaattcaatc agatattttt aatgttgaaa taaaaccaaa tttaagcgaa ggtaaagcca
    13681 tagcttttgc acacggtttt aatatccact acggacaaat tgttgttcca aaaggtgtag
    13741 atgttattat gatagcacct aaagcaccag gacacacagt aagaaatgaa tttactttag
    13801 gtggtggaac tccttgcttg atagccattc atcaagatga aagtaaaaat gctaaaaatt
    13861 tagctttaag ttatgcaagt gcgatcgggg gtggacgcac aggtattata gaaacaactt
    13921 tcaaggctga agcagaaaca gatctttttg gtgaacaagc tgtgctttgc ggggggctta
    13981 gtgctttgat tcaagcaggc tttgaaactt tagttgaagc aggttatgaa cctgaaatgg
    14041 cttattttga gtgtttgcat gaaatgaagc ttattgtgga tttgatctat caaggtggta
    14101 ttgcagatat gcgttattct atttcaaata ctgcagaata tggtgattac atcacagggc
    14161 caaaaatcat caccgaagag actaaaaaag caatgaaagg tgttttaaaa gatatacaaa
    14221 atggagtttt tgcaaaagat ttcatcttag aacgtcgtgc aggttttgct agaatgcatg
    14281 cagaacgtaa aaatatgaat gattctttga tagaaaaaac aggacgcaat ttgcgtgcta
    14341 tgatgccttg gatcagtgct aaaaaattag tagataaaga taagaactaa acattgtcaa
    14401 agaaaaaatt agttcaaatt cagcgttatt taatcatagc tatacttttt ttactttgta
    14461 tagctttagc tttgggaatt ttgattaaat atcaagattc tcaaaatatt actcaaataa
    14521 atactacaaa cattgttaaa gaagatgaaa taaaaacccc atccattttt aaagatcatg
    14581 tggataaaat tgatgttttt agatatgttg aaatatttga tcaaaatatt gaaaataatc
    14641 attccatagg tattttagat caaaaaatgc aagaaattga tgatttaaat acaagtttaa
    14701 atgaacaaaa tttaagtaat gcggatcaaa atttaactca aaatcaaaat tttattttaa
    14761 aagatgaaaa tttaactcaa gaacaaaatt taacttttgc agaggatatt aatttaaata
    14821 aaaattctaa aaaaccaaaa cttgctatta ttatcgatga tatggcaaat gcaaatcaag
    14881 ttagaggttt aaaagcttta aatttaaaac taaacccttc tttttttccg ccagataaaa
    14941 accacagtga aacaccaaaa cttgctttga aatttgattt ttatatggtg catttacctt
    15001 tagcggcgat taattataat aaacccgaac ttgatacttt aaatccaaat gatagcaaag
    15061 aaaggatttt gaaaaaaatt aagcaaatta aaaaagattt taaaaattta agatatatca
    15121 acaatcatac aggaagttta tttacgagta acgaagaagc tatgagaaaa ctttatgaag
    15181 ctttaaaaaa tcaaaatata ttttttgtgg attctaaaac cataggaaat tctaaggcga
    15241 ataaaatagc taaagagctg agtatccctt atatacaaag agatgtgttt ttagataatg
    15301 aagatgatgt taattatgtt aaaaaacaac ttaaaagtgc ggtagaactt gcgcaaaaaa
    15361 aaggttttgc tatagctata ggacatccta gaaaaaacac ttttaaagcc ttagagcaaa
    15421 gcaaggattt gttaaaaagt gtagagcttg tgtatttgag tgaaatttat ggcaagtgaa
    15481 attttgccta atgagttttt agagcttttt aaagatttaa aaaagccacc taaaaaattg
    15541 cactataagg gagatttatc tttattaaag caagataaaa ttgctattat aggttcaagg
    15601 cgtatgagca tttatacaaa aaattgtgtt ttttctttag caaatatgct caaaaatgct
    15661 catctttgtg tggtaagtgg cggtgcttta ggggtggata ttactgcaag tatggcagct
    15721 ataccaaata ctataggtat ttttgccaat ggcttaggac aaatttatcc taaaggcaat
    15781 gaaaaaatta tcaagcaaat ttatgaaaat gctttggctt tgagtgaata taaagatgat
    15841 tatttgccta aaaattatga ttttttacta agaaatcgtt tggttgttgc tttaagtaag
    15901 gccgttgtag ttgcacaagc ggatattaaa agtggttcta tgcaaagtgc aagacttgct
    15961 ctagagctta ataagccttt atatgtttta ccacaaagat ttcaagaaag cacaggaact
    16021 aatttacttt taaaagaaaa taaagcaaaa ttaatttgtg attttaagga atttgtgagt
    16081 gagtttgcaa gtatagatat aaataaagat gaatttttag agttttgtaa aaaaggtgtg
    16141 agtgttgatg aggcttttaa aatttatgga caaaaagttt atgaatatga gcttgaagga
    16201 aaaatttcca tagaagggct ttttataagg gttttaatat gaaagctttg gctttggatg
    16261 tgggtttaaa acgtataggt gtagcacttt gcgtggataa aaagattgct ttgcctttaa
    16321 atgcggtttt aagaaaaaat cgcaaccaag ctgctagtga aatcaaaaat ttacttaaaa
    16381 tacatgaaat ttctttactt atagtaggca ttcctaaagg tggatcgagt gaagaagaaa
    16441 tgacaagacg tattaagcat tttgtatctt tgcttgagtt tgataaagaa atttgtttta
    16501 tagatgaaag tgggacaagc aaagaagctt taaaatacgg tgtagctaat gcacgcaaaa
    16561 aagatggtaa gttagactct ttagctgctt ttattatgat aaaggattat tttgctctct
    16621 aggatagaaa aactctatac caaggatgaa atgcaaaata ttttatcttc ttttgctcaa
    16681 gaaaaaaatg tttgcgtatt tgtaaatact ttaaaatcta gcgttaagga attggaagaa
    16741 gaatttttaa aacaaggttt aaaatttaga aaaatcaata cttattgtta tttgtttgaa
    16801 gctaaagata aagttatttt aagttctatg aaagctttta atgaatttaa attttatata
    16861 caaaattatt cttcttattt gtgtgctcta aatttagaag ttaaagcagg gcaaagtgtt
    16921 cttgatatat gtgcggctcc tggtggtaaa agtatcaatc ttgcaaattt tatgcaaaac
    16981 acaggttatt tggcttgtaa tgagcttagc aaggataggt tttttacttt acaaaaaaat
    17041 cttaaaaatt acggcgtgaa tgctaaaatt tttatgaaaa atggtaaaaa tataggcaat
    17101 ttatgtcctt tgaaatttga taaaatcttg cttgatgcac cttgttcaac ttttgctaaa
    17161 ataggttttg acttagaaaa aagctatcaa gaaataaaaa atattgctaa aactcaaaaa
    17221 aaacttctac attctgcttt aaaagcgtta aaaataggtg gggaacttgt atatagcact
    17281 tgcactttta ccaaagaaga aaatgaagaa gtgatagaaa atgctttaaa aagtgagttt
    17341 aaattagagc ttttagatat tgatttagaa gatgtgcaag ctaaagcagg acatagtgaa
    17401 gagtttgtcg aaatttcaaa atgtaggcgt attttaccaa gcttagacta tgatggattt
    17461 tttatagcta agcttaggaa attgcgctga ttaataaaat tattcacatc gaaatataaa
    17521 ttcataaaaa aacttaaaaa acaataaata tttttttgtc tatttcaaag cttaaagttc
    17581 tattttttag tgctttgaga agaaaatcac agcgtgaaaa ggctgtgaat aaagttgaaa
    17641 tttttttaac cttaaaaaat gagattagtc tgattgtatc ttttgtagtt ttggtataat
    17701 gacagcttgg caatatcctt gattaggatt atttgtaaaa taatgttgat ggtagttttc
    17761 tgctttgtag taagtttgta attttgaaat tttggtgact atttttttgc taaatatttt
    17821 ttgttgctct tcaatgaaat tttgagctaa aattctatct tcttcatttt cgtaaaaaat
    17881 tatagaacgg tattgtatac ctatatccgc accttgtcta tcaatgcttg ttggatcgtg
    17941 aattttaaaa aagagtgtca agatttcaag aagtgagatt tgtttttcat tgtattttat
    18001 tttgacaact tctatattgc catcgccatt acatacgctt tcataactag gatttggatt
    18061 tcctccactg tatccaactt cagtattgat tacacctctt acacgttcaa atacagcttc
    18121 aatacaccaa aaacaaccgc cacctaaaat aatatttttc atgtgagttt tccttgggtt
    18181 tagcccttta aagggcttat ttgtagtttt taattgcttt ttctaaaatt tcaattgcag
    18241 ctttttcatc tttgaaatct tggactttaa cccatttatt tggttctaaa attttataag
    18301 tttcaaagaa atttttgatt ttgtttaaag ttgcttgtgg taaatctgta taggttttta
    18361 tactatcata tcttgcatct atttttaaat ttggaacagc aagaagtttt tcatccattc
    18421 cgctttcatc ttccatgatt aaaacaccga ttaaacggca aggaatcaca gctccagctt
    18481 gaataggata ttcattaagc accaaaatat ccacaggatc accatcatca gctaaagtat
    18541 tggcaataaa accatagttt gcagggtaaa acatcgcact agccataaca cgatctacca
    18601 taatagcacc actatcttta tcaatttcat atttgatatt tgagccgtat gggatttcga
    18661 ttacggcgtt gattttattt gggatatctc cgattttaat tttacttaaa tccatttttt
    18721 ctccttatat actttgaatt tttttaatca gttctttcat atctgcaaca ataggttcta
    18781 tagtacgctc tccatcaata ataaaatgaa gttttttctt ttgataaaaa tctaaaattt
    18841 catttagagg ttctgtataa actttcattc tattataaaa tacttcttca ttatcatcta
    18901 taccacgatt tctacctaaa actctttctt tagcaacttc ttcacttact cttacttcta
    18961 taacaccttt aagacaaact tcattttgct cgtttaatac cttatcaaat tccatcattt
    19021 gctctacgtt tcttggataa ccatcgatga taatagtttt tgtaggtgcg gctttaagtg
    19081 ctgaaactat agcatttata accacatcta aaggaacaag attaccttta gaaataaagc
    19141 catctatagt ttttccaagt tcacttccac ttgctacttc ggctcttaaa agatcgcctg
    19201 ttgagtagtg tgtgatattt gtcgcatctg cttgtgcaat taaactagca tcggtagttt
    19261 ttccgctacc tggtgcgcct atgattaaaa ataattcttt cattttatat tctcccttaa
    19321 tttgattcct aattctctca ttgcttcatt gctagcaggt gatggtgcgt ctgtcattaa
    19381 gcattgtgct ttttgagttt ttgggaaggc tatgacttct cttatgctat ttgctcctgt
    19441 aactaacatg ataagtctat caagccctat agcaattcct ccgtgtggtg gtgcaccaaa
    19501 gcttagagca tcaagcaaga aaccaaattt ttctctttgt tgttcttcat cgatatttaa
    19561 aagcttgaat actttttgct gaatatcgtt tttatgaatt cttatactac caccacctaa
    19621 ctcaacgcca tttaacacca catcataagc aatagatgaa atttcttcta aatcattttc
    19681 atcaatattt tttggcatag taaaaggatg atgcattgca gaataacttc catcatcatt
    19741 ttgctcaaac ataggaaaat caacaaccca taagaattct aaagcatttg gatctataag
    19801 atttaattca ttggccaaga aaattctaaa tcttcccata taatcaagca cagttttttt
    19861 ggttcctgca ccaaaaaata ctacatctcc tacttcaagt tcgcagcgtt tgcttagttc
    19921 atttaagtct tcttcgctaa agaatttgca aagtggacct ttaagtccat cttccttaac
    19981 ttgtataaaa gctaagcctt gagcgccaaa tttacgcaca aattcttcaa atctttgcat
    20041 ttgtcttttt gaaaaaatag tatcaccttt tgggacgcgt atggctttga tacgattttt
    20101 ctttatatct ttagcaatat ttgcaaaaat ttcattattt gatttagcaa aaatatcaat
    20161 tacatcaata aatttaagat caaatcttaa atccggttta tctgaaccgt aattttcgat
    20221 agcgtctttg tatcgcattt gtctaaaagg ggtttgaatt tctttaccgc aagctttgaa
    20281 aatatctttt aaaaaatttt cagctacatt gataacatct ttttgctcac aaaaactcat
    20341 ttcaacatca atttgtgtaa attcaggttg gcgatcagct cttaaatctt catctctaaa
    20401 gcattttgcg atttgaaaat aacgatcaaa accgctacac atcagaagct gtttgaaaag
    20461 ttgagggctt tgtggaagag cgtaaaattc accctgatgt acacgagagg gcacaagata
    20521 atctcttgct ccctctggag tggctttagt aagaataggg gtttcaactt ctaaaaatcc
    20581 catacttgct aaagaatttc tggctgcgat acaggcttta gagcgtaaag caaaattttc
    20641 ataaagttta ggatttctta aatctagaaa acgatatttt aagcgcaact cctcatttac
    20701 gctctcatcg gcgatagtaa aaggaggtac ggcactttca ttttctataa tgagcttaga
    20761 gacaactact tcaatctctc ctgtttttaa tttaggattt acaagtcctt caccgcgtgg
    20821 acgaataatg ccttctacaa taagtacaaa ttcatttctt gcattagaag cgatttcatg
    20881 agcttgtttg ctatcatttg gatcgcaaac aagttggata ataccacttc tatctcttaa
    20941 atctataaaa ataactccac cgtgatcgcg gtagctattt acccaaccgc aaagtttaat
    21001 gttttgacca acatgggaaa ttcccaagtc tgtattataa tgacttcgca aatttattcc
    21061 ttgaaaaaga tttttttaag ataatgagca aaattatagt atttttattc ttttgctttg
    21121 ctaagatttg atataatttt tcatgcaaaa taaaatagat tataaaaatg ttaaaaaaat
    21181 tggacttgtt acacgaccta atgtgagttt agataaagaa attttaaaac ttcaatcaat
    21241 tttatttata tataaagttg aacttgtgtt atttaaagaa agttctaaaa ttttagattt
    21301 gccaaagtat gaactagatg atttgtttaa aatatctgat tttgttattt ctttgggtgg
    21361 agatggaact ttgatttctt tgtgccgtaa agcttgtgaa tatgataaag cggttttggg
    21421 aattcatgct ggacatttgg gttttttgac agattttaaa gtggatgaat ctgaaaattt
    21481 ttttcaagct ttttttcaag gagaatttag aatagaaaag ccttatttgt taagtgtttt
    21541 tttggaagat aaacagggaa aaattttaga aaaattagct tttaatgatg tggttatcag
    21601 taaagataat aaagtttcta tggctcatat agaggttttt agaaaagaaa agaaatttaa
    21661 tgagtatttt ggtgatggac ttattgttgc aactcctgca ggttcaacag cttataattt
    21721 aagtgcaaat gggcctatag tttatacctt ggctcaagct tttatattaa ctcctgtttg
    21781 ttcacattct ttaacgcaac gccctattgt cttgccaaaa ggttttgaaa tagagattat
    21841 ggcaaaggat tgtatgcttt gtattgatgg acaagaaaat tataaaatga atgattttaa
    21901 aagtataaaa gtgggtttaa gtgataaaaa tgtggcttta attcacccaa aaaatagaga
    21961 ttattttcaa attttaaaag aaaaattgca ttggggaaat tgatgataaa tagaattttt
    22021 atgaaagaaa atcttggttt taaaaaagct gagcttgaaa tttctaaagg gtttactgtt
    22081 tttacaggac tgagtggagc tggaaaatca gtcttgttta aaggaatttt atctgcattt
    22141 tctttgagtg aaagcgaagc taagattgtt gaaatagagc ttgatgatga gttggatttg
    22201 gaaagttttg gtatagaaag tgaaaaggag aatgttttta agcttttaaa agaaaaaagc
    22261 acaaagtatt ttatcaataa tcaaagcata gctaaaaaaa gcttgcaaaa tttaagcaaa
    22321 acttttatta agtatttaag tccaaaagaa aataatgaat ttgaaaatga aaaattttta
    22381 aatctcttag atattttaga gatacaagaa aatgcaaatt ttatttcttt tttagaagat
    22441 tttaaaaaag attttaatgc ttacagtcaa atttctaatg atcttaatgt aattttagaa
    22501 gaagaaaaaa aagtagaaga attaaaagaa ttaactaggg tgcaaattga gaaaatttca
    22561 agtatcaatc ctaaaatagg tgaatatgaa gagcttttaa cacttaaaaa aaagctttct
    22621 aaaaaagata aactagaaga agcttggagc aaggcagagc gtatttttga atttgaaaaa
    22681 gttgtcattg aagctttaaa tttaagcgaa gttgatgcga gtttttttag cgaatgttta
    22741 aatgagttgc gtgtgatttg tgaaaatcaa aaaatggaag atttggattt tgatgtggag
    22801 acgcttttag atcgcattga aaaactatcc tatcttatca agcgttatga aagcatagaa
    22861 aatgctttag agatcttaac gcaaaaaaaa catgaactag agcattatga aaatataagt
    22921 tttgaaaaaa aagaacttga gaaaaaattt caaaaattaa aacaaaaact agaa
//
LOCUS       DAPWAA010000023        22539 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.023, whole genome shotgun sequence.
ACCESSION   DAPWAA010000023 DAPWAA010000000
VERSION     DAPWAA010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22539
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.023"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            27..299
                     /locus_tag="RTF91_000820"
     CDS             27..299
                     /locus_tag="RTF91_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943725.1"
                     /translation="MSFTDFYFDREEKRISNQTKELITNEFESKENLENIFANLQDFK
                     NSLEISLEDDEEIAISLQAYGDEFMRNAYELLERVRKFEKQCKKLF"
     gene            659..928
                     /locus_tag="RTF91_000821"
     CDS             659..928
                     /locus_tag="RTF91_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943726.1"
                     /translation="MKAYHTKEQVIIKLSKDEYRKEMKLNKSLKDENKSLKAEISNLE
                     NEKIELLKELKEQIEANMKNIKEISSLQNKIYELLYAKERSKLCS"
     gene            919..1176
                     /locus_tag="RTF91_000822"
     CDS             919..1176
                     /locus_tag="RTF91_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943727.1"
                     /translation="MFLNSKKNEKIRYLEKEVQRLKGIIALKDTAINEISLKLEEEIE
                     TNIKLSSFRIKILDALGLIGVFKSDDKAIKEAKRLKEKECE"
     gene            1167..1388
                     /locus_tag="RTF91_000823"
     CDS             1167..1388
                     /locus_tag="RTF91_000823"
                     /inference="COORDINATES: protein motif:HMM:NF025456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943728.1"
                     /translation="MRITSKQQEKIVLGLLLKNGVVDNFYCINKRITTRLGAYIYNLR
                     NKGYAIETIRNKNTRNTFYILKSTSKIKR"
     gene            1395..2249
                     /locus_tag="RTF91_000824"
     CDS             1395..2249
                     /locus_tag="RTF91_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HDZ4943729.1"
                     /translation="MNCRIIDLEQGSPEWLDFRKGKIGASMVASCVGIKGAFNTKEEV
                     RDIILGVKEVYENEAMRKGKEYEPLIRFRVEFLHSVSITPIVLQSLENEMFIASLDGM
                     DENGIIYEFKYSQNEYDFIKKNKKPSDKYYAQVQFQLYISGKEKCTFVTMNKEEELIE
                     CEVLKDETYQNWLVKNVKQFILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIK
                     EKLESLKKELIALANGEKARCLDITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISM
                     CLKIKKGA"
     gene            2299..2460
                     /locus_tag="RTF91_000825"
     CDS             2299..2460
                     /locus_tag="RTF91_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system HicB family antitoxin"
                     /protein_id="HDZ4943730.1"
                     /translation="MAEEKESKGSYNLQIKIPNELKDKLEKKAEKAGVSLNQYIMYLF
                     IDDIKNERI"
     gene            2591..3331
                     /locus_tag="RTF91_000826"
     CDS             2591..3331
                     /locus_tag="RTF91_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory protein"
                     /protein_id="HDZ4943731.1"
                     /translation="MNDLVYSLNGGLVTDQNKISTISKVDINSIQRLIRNYKQDLECF
                     GELGFELQKIAKTNKKVYFLNEQQATLLLTYMKNSESVRNAKKVLVFAFYQMKEKLRS
                     LEQEQEKARFKTLSDENLRLNSLNHHQKIGYRSQLKQQKEKYENKIKALKYDLEKKKQ
                     LSFKRKLSEKELLELRKILAKDYDILCFKKWEYMLFAESVSGKNYKLEKENDFCIYKS
                     IKDSFNSKLDYYKNYNEYEEKWKKILRR"
     gene            3333..3875
                     /locus_tag="RTF91_000827"
     CDS             3333..3875
                     /locus_tag="RTF91_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HDZ4943732.1"
                     /translation="MGVLKRLDKTIIIEDDRKSEKELVEHCILEGISLNNANLENLDL
                     SGLNFDNVFINGTSFKNANLNDISSKNASFIDCNFSGVSFHFCNFLRTEFENCIFDNV
                     SLRDCIGDMKNIFSVVIDTYVMTFTKTIMNLGCNSKSIDDWRKTNPDDIDDEEQKWLW
                     SYYKDTIFEIIDKRLGVVND"
     gene            3868..4038
                     /locus_tag="RTF91_000828"
     CDS             3868..4038
                     /locus_tag="RTF91_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDZ4943733.1"
                     /translation="MIKKYLREKELSEYLGVSVTSLFKLRQDGKIPYIRIGKSIRYEI
                     KEIEKWLKAKRH"
     gene            complement(4035..5237)
                     /locus_tag="RTF91_000829"
     CDS             complement(4035..5237)
                     /locus_tag="RTF91_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDZ4943734.1"
                     /translation="MLTQKDIDNLEIKDKRYMISVGEPKELYVRVNPTGKKVFYLRAS
                     KFKNFITIGECQKGVLNVTNAREKAKDLLKSMYDGKFIGKNDKVMTLEKANFLYVDIK
                     SKKLNSATIKKEQSIFKKYIIPTLGQKDINELKKDDFLPIYDLMQKKGIYETIKKNIS
                     LLCRIFEISRQRGDLKTDIILQLKDLKKFYNEANHNKVKHFKAIVEEQEIKNMLECMK
                     EYKNHPRTNTTIINAIYFTLLTAQRSKNIRFAKWSDIDFENNLWIIKADEMKVRSNGD
                     NIIPLNEYALKILEIQRILNGDKKYIFANNNKTISENFAVRFFKFYNLEHTIHGYRST
                     FRSVYTNKSNELIQQGISKDIAEMILHHISGNEIERAYNRAKAIDLRVKLMQWYGNYL
                     NSLCEFCF"
     gene            complement(5417..5493)
                     /locus_tag="RTF91_000830"
     tRNA            complement(5417..5493)
                     /locus_tag="RTF91_000830"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5457..5459),aa:Arg,seq:cct)
     gene            complement(5521..7596)
                     /gene="fusA"
                     /locus_tag="RTF91_000831"
     CDS             complement(5521..7596)
                     /gene="fusA"
                     /locus_tag="RTF91_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDZ4943735.1"
                     /translation="MSRNTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVH
                     DGAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGA
                     VAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPV
                     PLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEA
                     VSETSDELMEKYLGGEELSLEEIKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVV
                     AYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCL
                     ESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEK
                     DKVILERMDFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIIS
                     GMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHV
                     FLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDVKVTVY
                     DGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNK
                     RRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVA
                     DEIIKKRNG"
     gene            complement(7609..8079)
                     /gene="rpsG"
                     /locus_tag="RTF91_000832"
     CDS             complement(7609..8079)
                     /gene="rpsG"
                     /locus_tag="RTF91_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDZ4943736.1"
                     /translation="MRRRKAPVREVLPDPIYGNKVITKFINSLMYDGKKSTATTIMYG
                     ALEAIDKKGGEKKGIDIFNDAIENIKPLLEVKSRRVGGATYQVPVEVRPARQQALAIR
                     WIISFARKRSERTMIDKLAAELLDAANSKGASFKKKEDTYKMAEANKAFAHYRW"
     gene            complement(8149..8535)
                     /locus_tag="RTF91_000833"
     CDS             complement(8149..8535)
                     /locus_tag="RTF91_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDZ4943737.1"
                     /translation="MPTINQLVRKERKKVLEKSKSPALKNCPQRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGAL
                     DTAGVAKRTVSRSKYGAKRPKAGAAK"
     gene            complement(8657..13210)
                     /gene="rpoC"
                     /locus_tag="RTF91_000834"
     CDS             complement(8657..13210)
                     /gene="rpoC"
                     /locus_tag="RTF91_000834"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDZ4943738.1"
                     /translation="MSKFKVIEIKEDTRPRDFEAFQLRLASPEKIKSWSYGEVKKPET
                     INYRTLKPERDGLFCAKIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSR
                     MGHIELVTPVAHIWYVNSLPSRIGTLLGVKMKDLERVLYYEAYIVENPGDAFYDNEST
                     KKVEHCDVLNEEQYQNLMQRYENSGFKARMGGEVVRDLLANLDLVALLNQLKKEMAAT
                     NSEAKKKTIIKRLKVVENFLNSNLNANTDNDEAVPNRPEWMMITNLPVLPPDLRPLVA
                     LDGGKFAVSDVNDLYRRVINRNTRLKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRR
                     ANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPK
                     KMALELFKPHLLAKLEEKGYATTVKQAKKMIENKTNEVWECLEEVVKGHPVMLNRAPT
                     LHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSQEAIAECKVLMLS
                     SMNILLPASGKSVTVPSQDMVLGIYYLSLEKAGAKGSHKICTGIDEVMMALESKCLDI
                     HASIQTMVDGRKITTTAGRLIIKSILPDFVPENSWNKVLKKKDIAALVDYVYKQGGLE
                     ITASFLDRLKNLGFEYATKAGISISIADIIVPNDKQKAIDEAKKQVREIQNSYNLGLI
                     TSGERYNKIIDIWKSTNNVLSKEMMKLIEKDKEGFNSIYMMADSGARGSAAQISQLAA
                     MRGLMTKPDGSIVETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKL
                     IDVAQNVKITIEDCETHEGVEINEITADSSIIETLEERILGRVLAEDVIDPITNSVLF
                     AEGTLMDEEKAKILGESGIKSVNIRTPITCKAKKGICAKCYGINLGEGKLVKPGEAVG
                     IISAQSIGEPGTQLTLRTFHSGGTATTDLQDRQVSAQKEGFIRFYNLKTYKNKEGKNI
                     VANRRNAAILLVEPKIKAPFKGVINIENIHEDVIVSIKDKKQEVKYILRKYDLAKPNE
                     LAGVSGSIDGKLYLPYQSGMQVDGNESIVEVIKEGWNVPNRIPFASEILVEDGEPVVQ
                     NIKAGEKGILKFYILKGDGLDRVKSVKKGDIVKEKGFFVVIADENDREAKRHYIPRES
                     KIEFNDSEKIDDANTIIASAPKKEKKVIAEWDAYNNTIIAEIDGVVSFEDIEAGYSAD
                     EQIDEATGKRSLVINEYLPSGVRPTLVIAGKGDKAVRYQLEPKTVIFVHDGDKISQAD
                     ILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIII
                     QAEDGTSAEYLIDKSKHIQVRDGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLIFE
                     IQQVYRGQGVVISDKHIEVIVSQMLRQVKVVDSGYTKFIEGDLVSRRKFREENERIIR
                     MGGEPAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVI
                     LGRMIPVGTGLYGEQNLKLKEQE"
     gene            complement(13203..17339)
                     /gene="rpoB"
                     /locus_tag="RTF91_000835"
     CDS             complement(13203..17339)
                     /gene="rpoB"
                     /locus_tag="RTF91_000835"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDZ4943739.1"
                     /translation="MCDMLDNKLGNRLRVDFSNISKQIEIPNLLQLQKKSFDYFLNLD
                     NGESGIEKVFKSIFPIHDPQNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIR
                     LTLHEKDEKTGEKVGVKDIKEQEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVI
                     FKEEESSTVANKLVYTAQIIPDRGSWLYFEYDAKDVLYVRINKRRKTPVTMLFRALGY
                     KKQDIIKLFYPIQTIHVKKDKFLTEFNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKK
                     AEQLIKDGLKWIEYPVEILLNRYLANPIIDKESGEVLFDSLTLLDESKLAKIKEQKSF
                     DIANDLANGVDAAIINSFAQDGETLKLLKQSENIDDENDLAAIRIYKVMRPGEPVVKD
                     AAKAFVNDLFFNPERYDLTKVGRMKMNHKLGLEVPEYVTVLTNEDIIKTAKYLIKVKN
                     GKGHIDDRDHLGNRRIRSIGELLANELHLGLAKMQKAIRDKFTSLNADLDKVMPYDLI
                     NPKMITTTILEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDVH
                     ATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVEAPYRKVENGKVTNEVVYLTAT
                     QEEGLFIAPASTKIDAKGNIVEEFVEARQDGETILARREEVQLIDLCSGMVVGVAASL
                     IPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQIIARDAWEAVKAKRGGVVE
                     KVDNKSIFILGEDDKGSFIDHYTMEKNLRTNQNTNYIQHPIVKKGDVVKAGQIIADGS
                     SMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVHIYEKEIEARELKD
                     GIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSPKGEVKPTPEERLLR
                     AIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRAIKSYDKEKMALEKEHH
                     DRLLMIDREEMLRVCSLLSKAPLNSDQKIGDKNYKKGQTADTSELEKINRFTLTTLIK
                     AYSKEIQKEYDNLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYIATKRK
                     LKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILESHL
                     GLIGLRLGDQIQEIFDRKQKDFIKELRIKMLEICSIPRLSSEKEFIKSLSDEELLNYA
                     RDWSKGVKFATPVFEGVNIEEFSKLFEMAKIDMDGKTELYDGRTGEKIAERVHVGCMY
                     MLKLHHLVDEKVHARSTGPYSLITQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLRE
                     MLTIKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
                     "
     gene            complement(17447..17824)
                     /gene="rplL"
                     /locus_tag="RTF91_000836"
     CDS             complement(17447..17824)
                     /gene="rplL"
                     /locus_tag="RTF91_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDZ4943740.1"
                     /translation="MKISKEDVLEYISNLSVLELSELVKEFEEKFGVSAAPVMVAGGA
                     AAGGAAAAAEEKTEFDVVLTDGGAKKIEVIKIVRALTGLGLKEAKDAVEQTPSTLKEG
                     VAKAEAEEAKKQLEEAGAKVELK"
     gene            complement(17845..18324)
                     /locus_tag="RTF91_000837"
     CDS             complement(17845..18324)
                     /locus_tag="RTF91_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDZ4943741.1"
                     /translation="MTRSEKVEIIAKLEEGFKASEAIVVCNYRGLSTKKLEELRNNAR
                     ENNVKVQIVKNTLANIALSNSGKTGLVLKDTNIYLWGEDQLSVSKVAAKFEENNDKFE
                     IKTAHIEGEVADVAKVKALAKMPSRNELLAMLLQVWNAPITNFTIGLNALKNKKESE"
     gene            complement(18478..19179)
                     /locus_tag="RTF91_000838"
     CDS             complement(18478..19179)
                     /locus_tag="RTF91_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDZ4943742.1"
                     /translation="MAKIAKRLKELSQKIDSNKEYALSDAIDMVKTLKSAKFDETVEI
                     ALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVE
                     EIQKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQ
                     VNFRVDKQGNIHAGLGKVSFSKEQLWDNISAFVKAINKHKPAAAKGRYIKNAALSLTM
                     SPSVKLETQELLDMK"
     gene            complement(19234..19659)
                     /gene="rplK"
                     /locus_tag="RTF91_000839"
     CDS             complement(19234..19659)
                     /gene="rplK"
                     /locus_tag="RTF91_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDZ4943743.1"
                     /translation="MAKKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNE
                     RTKDMAGFNIPVVITVYADKSFTFITKQPPATDLIKKAAGISKGTDNPLKNKVGKLTR
                     AQVLEIVDKKIADLNTKDRDQAAKIIAGSARSMGVEIVD"
     gene            complement(19685..20218)
                     /gene="nusG"
                     /locus_tag="RTF91_000840"
     CDS             complement(19685..20218)
                     /gene="nusG"
                     /locus_tag="RTF91_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDZ4943744.1"
                     /translation="MSTHKWYAIQTYAGSEMAVKRAIENLVKDNGIEEQLKEIVVPTE
                     DVIEFKNGKEKISERSLYSGYVFALLDLNTELWHRIQSLPKVGRFIGESKKPTPLTEK
                     DINLILEKVHNRAAPKPKISFEEGENVRIIEGPFANFTAIVEEYDMVRGLLKLNVSIF
                     GRSTPVEILYSQVEKII"
     gene            complement(20228..20407)
                     /gene="secE"
                     /locus_tag="RTF91_000841"
     CDS             complement(20228..20407)
                     /gene="secE"
                     /locus_tag="RTF91_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDZ4943745.1"
                     /translation="MEKLITYFKLSKAELRKVIFPLKEQVRNAYITVFVVVAVVSLFL
                     ALVDWIMSSIVSAIV"
     gene            complement(20426..20501)
                     /locus_tag="RTF91_000842"
     tRNA            complement(20426..20501)
                     /locus_tag="RTF91_000842"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(20466..20468),aa:Trp,seq:cca)
     gene            complement(20513..20671)
                     /gene="rpmG"
                     /locus_tag="RTF91_000843"
     CDS             complement(20513..20671)
                     /gene="rpmG"
                     /locus_tag="RTF91_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDZ4943746.1"
                     /translation="MRIKVGLKCEECGDINYSTYKNSKNTTEKLELKKYCPRLKKHTL
                     HKEVKLKS"
     gene            complement(20719..21918)
                     /gene="tuf"
                     /locus_tag="RTF91_000844"
     CDS             complement(20719..21918)
                     /gene="tuf"
                     /locus_tag="RTF91_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDZ4943747.1"
                     /translation="MAKEKFSRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRRGLAEL
                     KDYDNIDNAPEEKERGITIATSHIEYETENRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDAELLELVEMEIRELLSS
                     YDFPGDDTPIISGSALKALEEAKAGQDGEWSAKIMDLMAAVDSYIPTPTRDTEKDFLM
                     PIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEA
                     GDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRP
                     QFYVRTTDVTGSIKLADGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSG
                     VVSKIIK"
     gene            complement(21986..22060)
                     /locus_tag="RTF91_000845"
     tRNA            complement(21986..22060)
                     /locus_tag="RTF91_000845"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22026..22028),aa:Thr,seq:ggt)
     gene            complement(22162..22238)
                     /locus_tag="RTF91_000846"
     tRNA            complement(22162..22238)
                     /locus_tag="RTF91_000846"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22202..22204),aa:Gly,seq:tcc)
     gene            complement(22245..22330)
                     /locus_tag="RTF91_000847"
     tRNA            complement(22245..22330)
                     /locus_tag="RTF91_000847"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22294..22296),aa:Tyr,seq:gta)
     gene            complement(22380..22455)
                     /locus_tag="RTF91_000848"
     tRNA            complement(22380..22455)
                     /locus_tag="RTF91_000848"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22420..22422),aa:Thr,seq:tgt)
BASE COUNT         7366 a         4183 c         3146 g         7844 t
ORIGIN      
        1 tatcaacaaa acaaaaagga gaaaagatga gttttacaga tttttatttt gatagagaag
       61 aaaaaagaat ttctaaccaa acgaaagaat taattacaaa tgagtttgaa agcaaagaga
      121 atttagaaaa tatatttgca aacttgcaag attttaaaaa ctctttagaa ataagcttag
      181 aagatgatga agaaatagca atatctttac aagcttatgg agatgaattt atgagaaatg
      241 cttatgaact tttagagaga gttagaaaat tcgaaaaaca atgcaaaaag cttttttgaa
      301 agtttaacaa gttctttaaa aaaaagagct ttcttaagct tttgaccgct tgaaaattaa
      361 gctttactat cgcgttgata gttctgtata gcggaagggt tagcaagtta tccaaaaact
      421 tggctcgtta ttattgttta tagtgctatt tttaaggttt tcttgcactt taaaaacgac
      481 agaaaatcaa gagtttaaga aaaaagcgga tttactcggc ttttcttaaa ctcctttaat
      541 gcttaaatgg ggcaacttta taaaatttac ttacttgaga atttaccttt ttgttttatt
      601 tcagttcttt taaagaactt agttgcccca tttaagcatt aattcaaaaa ggagaaaaat
      661 gaaagcttat catacaaaag aacaagtcat tattaagctt agcaaagatg aatatagaaa
      721 agaaatgaag ttaaacaaat ctttaaaaga tgagaataaa agtttaaaag ctgaaatttc
      781 taatcttgaa aatgaaaaaa tagaactttt aaaagaatta aaagagcaaa tagaagcgaa
      841 tatgaaaaat ataaaagaga ttagttcttt gcaaaataag atttatgagc ttctttatgc
      901 aaaagaaagg tcaaaactat gttcttaaat agcaaaaaga atgaaaaaat aagatatttg
      961 gaaaaagaag ttcaaagact aaaaggcata atagcattaa aagatactgc tataaatgaa
     1021 atttcattga aacttgaaga agaaattgaa accaatataa aacttagtag ttttcgtata
     1081 aaaatacttg atgctttagg gcttataggt gtttttaaaa gcgatgataa agctataaaa
     1141 gaagcaaaaa gattaaagga gaaagaatgc gaataacatc aaaacaacaa gaaaaaatag
     1201 ttttaggctt attattaaaa aatggcgttg tagataattt ctattgtatc aacaaaagaa
     1261 tcacgacaag acttggagct tatatctata atcttagaaa taaaggctat gcaatagaaa
     1321 ccattagaaa taaaaatact agaaatactt tttatatttt aaaaagcact tcaaaaataa
     1381 aaaggtagga taagatgaat tgcagaataa ttgacttaga acaaggtagc cctgaatggc
     1441 tagattttag aaaaggaaaa ataggtgcat cgatggtagc ttcttgcgta ggaataaaag
     1501 gagcttttaa cactaaagaa gaagtaagag atatcatctt aggggttaaa gaagtctatg
     1561 aaaatgaagc catgagaaaa ggcaaggaat acgagccttt gattagattt agagttgagt
     1621 ttttacattc tgtgagtatc actcctatag ttttacaaag tctagaaaat gaaatgttta
     1681 tagcaagttt agatggaatg gatgaaaatg gaattattta tgagttcaaa tactctcaaa
     1741 atgaatatga ttttatcaaa aaaaataaaa agccaagtga taagtactac gctcaagtgc
     1801 aatttcaact ctatattagc ggtaaagaaa aatgtacctt tgtaaccatg aataaagaag
     1861 aagaacttat agaatgcgaa gtcttaaaag atgaaactta tcaaaattgg ttggttaaaa
     1921 atgtaaagca atttatatta gattatatca tagatcaaaa aagtgaatat aaagagcttg
     1981 aagatactaa agcaaaaaat ctaacgattg aaattataag gcttgaaaac acgattaaac
     2041 ctattaaaga aaagctagaa agtcttaaaa aagaactcat agccttagca aatggtgaga
     2101 aagcaagatg tttagatatt acaatatatc cacaaagtag aactacaatt gactataagg
     2161 gctttttaga gcaaaaaaat attactgtgc ctaaagagtt ttataaagaa agtatttcaa
     2221 tgtgtttaaa aattaaaaaa ggagcataaa aataaactac tttttgataa aattaagaaa
     2281 ttaaaagaaa ggaataaaat ggcagaagag aaagaaagca aagggagtta taatttacag
     2341 attaaaattc caaatgagct aaaagacaaa ctagaaaaaa aagctgaaaa agctggagtg
     2401 tctttaaacc agtatataat gtatcttttt attgatgata ttaaaaacga acggatttaa
     2461 aatccgagcg ttaatctaat ttcaatgcta catcattatt atttttatga aaaaataatt
     2521 aaatagtatt gacaaatcat tcttaatata gtattatttc aataattaaa cattgaaaaa
     2581 ggattatatt atgaatgatt tagtttattc tttaaatggc ggtttagtta cagaccaaaa
     2641 taaaatttct acaatatcta aagtagatat aaattccata caaagactta taagaaatta
     2701 caagcaagat ttagaatgtt ttggggaact aggctttgaa cttcaaaaaa tagcaaagac
     2761 taacaaaaag gtttatttct taaacgaaca gcaagcaacg ctacttttaa cttatatgaa
     2821 aaatagcgaa agtgttagaa atgctaaaaa agttttagtt tttgcttttt atcaaatgaa
     2881 agaaaagctt agaagtctag aacaagaaca agaaaaagct agatttaaaa ccctaagtga
     2941 tgaaaatcta aggcttaatt ctttaaatca tcatcaaaaa ataggttata gatctcaact
     3001 taaacaacaa aaggaaaaat atgaaaacaa aatcaaagcc cttaaatacg acttagaaaa
     3061 gaaaaagcag ttaagtttta aaagaaagct tagtgaaaaa gaacttttag agcttaggaa
     3121 aatactagct aaagattatg acattctttg ttttaaaaaa tgggaatata tgttatttgc
     3181 tgaaagtgtt tcaggtaaaa actataaact agaaaaagaa aatgattttt gtatttataa
     3241 aagtataaaa gatagtttta attctaaatt agattattat aaaaactata atgaatacga
     3301 agaaaaatgg aaaaaaatat taaggagata aattgggagt tttaaaaaga ttagataaaa
     3361 ctattattat agaagatgat agaaaaagtg aaaaagaatt agtcgagcac tgcattttag
     3421 aaggtatttc tttaaataat gcaaacttgg aaaatctaga tttaagcggc ttaaattttg
     3481 ataatgtttt tataaatggc actagtttta aaaacgctaa tttaaatgat atctcaagca
     3541 aaaatgcatc ttttatagat tgtaatttta gtggagtaag ttttcatttt tgtaattttc
     3601 taagaacaga atttgaaaac tgtatctttg ataatgtctc tcttagagat tgtataggag
     3661 atatgaaaaa tatctttagc gttgttattg atacctatgt tatgactttt actaaaacta
     3721 taatgaattt aggttgcaat agcaaaagca tagacgattg gagaaaaaca aacccagatg
     3781 atatagatga tgaagaacaa aaatggcttt ggagttatta caaggacact atttttgaaa
     3841 ttatagataa aagattagga gttgtaaatg attaaaaaat atcttagaga aaaggaattg
     3901 agcgaatatt taggagttag cgtaacatca ctatttaaat taagacaaga tggtaaaata
     3961 ccttacattc gcataggaaa atctataaga tatgaaataa aagaaataga aaaatggctc
     4021 aaagccaaaa gacattaaaa acaaaactca caaagtgagt ttaaataatt tccataccat
     4081 tgcataagct ttactcttaa atcaattgcc tttgctctat tataagccct ttctatttca
     4141 ttaccgctta tatgatgtaa tatcatttct gctatatctt tactaatacc ttgctgtatc
     4201 agttcattgc ttttatttgt ataaacactt ctaaaagtag aacggtatcc atgtatagtg
     4261 tgttctaaat tataaaattt aaaaaatctc acagcaaaat tctcgctaat agttttatta
     4321 ttattagcga agatatactt tttatctcca tttagaattc tttgtatctc tagtatcttt
     4381 aaagcatatt catttaaagg aataatatta tccccattag atcttacttt catttcatct
     4441 gcttttataa tccaaagatt gttttcaaag tcaatatcac tccatttggc aaatcgaata
     4501 tttttacttc tttgtgctgt taaaagcgta aaataaattg cattaattat agttgtattt
     4561 gtccgtggat gatttttata ttctttcata cattctaaca tattttttat ttcttgttct
     4621 tctactatag ctttaaaatg tttaacttta ttgtgatttg cttcattgta aaatttcttt
     4681 aaatctttca attgaagtat tatatctgtt tttaaatcac ctctttgtct actaatctca
     4741 aatatcctac atagcaaaga tatatttttc tttattgttt cgtatattcc ttttttttgc
     4801 attaaatcat aaataggtag aaaatcatct ttttttaatt catttatatc tttttgtccc
     4861 aaagtgggaa taatatattt tttaaaaatt gactgttctt ttttgattgt agctgaattt
     4921 aattttttag attttatatc aacataaaga aaatttgctt tttcaagtgt cataacctta
     4981 tcatttttgc cgataaattt tccatcatac attgacttta aaagatcttt tgctttttct
     5041 cttgcatttg tgacatttaa aacacctttt tggcattccc ctattgttat aaaattttta
     5101 aattttgaag ctcttaaata aaaaactttt ttacctgttg gattaactcg gacatataat
     5161 tcttttggct cacctacact aatcatatat cttttatctt ttatttctaa attatctatg
     5221 tctttttgag ttagcattaa aaaccttttt tggtattttt gtagccagaa ttaacttttt
     5281 agctttggct acataaatgg ctacagaatt ataagaaaaa atagaaaaaa tttcaatcat
     5341 aatgaaaaac ttgaatgtag aaaagttgtt aaaatagtat attttgtgtc ttaatgttgg
     5401 ttaataaatt actaattggt gtccacggcg agattcgaac tcacgacctc aaaattagga
     5461 attttgcgct ctatcctgct gagctacgag gacagaaagc gggaaaaatc ccgctaaaat
     5521 ttaaccgttt ctttttttga taatttcgtc agcaacattt ttaggaactt catcataatg
     5581 atcaaattcc atagaataag ttgcacgacc ttgagtttga cttctaagat cggttgaata
     5641 accaaacatc tcagccaaag gacaaaatgc tgtaatgatt ttatttccac cacgctcatc
     5701 catactattt acttgaccac ggcgtttgtt aagatcgcca ataacatcac ccatgtaatc
     5761 ttcaggagtt tcaacttcaa ctttcatcat aggttcaaga attacagcgc ctgcttttct
     5821 agcaccttct ttaaagccca tagaagcagc aagtttaaat gccatttcag atgaatccac
     5881 ttcgtgataa cttccatcat aaacagttac tttaacatct tctacaggat aacctgctaa
     5941 aacaccattt tgtaatgcct cttgaacacc tttgtcaact gcaggaatgt attcttttgg
     6001 aattaccccg cctttaatat cattaacaaa ctcgtatcca ctacctggct caagtggctc
     6061 aaggcgtaag aatacatgtc cgtactgacc acgaccacct gattgtttag cgtatttgta
     6121 ttcttgttca acagtttttc tgatagtttc acggtaagca acttgtggtt gacctacttc
     6181 ggcttcaact ttaaattcgc gaagcattct atcaacaata atttcaaggt gtaactcacc
     6241 catacctgaa atgattgttt gaccgctttc ttcatctgta gaaactctaa aacttggatc
     6301 ttcttgtgct aatttattta aagcaataga cattttttct tgatctgctt tagtttttgg
     6361 ttcaactgca acagaaataa ccgggtctgg aaaatccatt ctttcaagga ttactttatc
     6421 tttttcgctt gcaagagtat ctcctgttaa agtgtcttta agtcctacaa cagcaccgat
     6481 ttcacctgcg taaagcactt taatctcttc tcttttatta gagtgcattt ttaataaacg
     6541 accgattctt tctttcttat ctttagttga gttataagca taagaaccgc tctctaaaca
     6601 accacgataa acacgcacga aagtaagctg tcctacaaac ggatcagtca tgattttaaa
     6661 tgcaaggcct gcaaactcac catcatcggt tgattttaca gaaacttctg tcccatcttc
     6721 atattcaccc ttgatatttg ccacttcatc aggagctggc aaataagcca caacagcatc
     6781 aagtaaaggt tgaactcctt tatttttaaa cgctgtacca caaagcatag gaacgataga
     6841 aaggcttaaa catcctgctt taatccctgt cttaatctct tcaagactta attcttctcc
     6901 acctaaatat ttttccatca attcatctga agtttcagaa actgcttcta tcattttagt
     6961 acgatattct tctgcttttt ctttaagttc agctggaatt tctttttcta cataatcagt
     7021 tggtttcgta tcatcttccc aaactaaggc tttcattgtt acaagatcaa tcacaccttt
     7081 gaaattatct tcagcaccga ttggaatttg aagtggaact ggattagctt ttaaacggtt
     7141 gcgaatttga tcttctacat tgtagaaatt tgcaccaatt ctatccattt tatttacaaa
     7201 tactattctt ggaacaccat atttgtttgc ttgtctccaa acagtttcac tttgaggttg
     7261 caccccgccc actgaacaaa atactgcaac agcaccatca agaacacgca tagatctttc
     7321 aacttcgatt gtaaaatcca cgtggcctgg agtgtcgata agattaattt gatgatcttt
     7381 ccaaaaacaa gttgtagccg cagaagtgat ggtgattcca cgctcttttt cttgctccat
     7441 ccagtccata gttgcagcac catcatgaac ttcgcctatc ttgtgactca tacctgtaaa
     7501 gaaaagaatt ctttcagatg tagtcgtttt acccgcatca atgtgagcag caataccgat
     7561 atttctaact ttttttaaag gagtatttct tgacatacac actccttctt accaacgata
     7621 gtgagcaaat gctttatttg cttcagccat tttgtaagta tcttctttct ttttaaatga
     7681 agcgccttta ctattagcag catctaaaag ctcagctgca agtttatcta tcatagttct
     7741 ttcacttctt tttcttgcaa aagaaataat ccaacgaatc gctaaagctt gttgcctagc
     7801 aggacgaact tctactggaa cttgataagt ggcaccacct acacgacgag attttacttc
     7861 tagtaaaggt ttaatgtttt caatcgcatc attaaaaata tcaatacctt ttttctcacc
     7921 acctttttta tcaatagcct ctaaagcacc atacataata gtcgtagctg tgcttttttt
     7981 gccatcatac attaaagaat taatgaattt tgtgattact ttattaccat aaatcggatc
     8041 aggcaagact tctcttaccg gagcttttct tcttctcatt atttttcctt caaattttaa
     8101 attttactca aacaaaatca aatctaacgg atttgtctgt atgaatgatt attttgcagc
     8161 acctgcttta ggacgtttag caccatactt agaacgagaa actgttcttt ttgcaacacc
     8221 tgctgtatca agagcaccac gaacaatgtg atatttaacc cctggtaagt cttttaccct
     8281 accaccacgc actaaaacaa tgctgtgttc ttgtaagtta tgaccttcac cgccaatata
     8341 gctgatcact tcaaagccac tagtaagtct tactttggca acttttctta atgctgagtt
     8401 tggtttttta ggggttgttg tataaaccct agtgcaaact ccccttcttt gtgggcaatt
     8461 tttaagcgct ggagatttag atttttctaa aacttttttg cgctcttttc ttaccaattg
     8521 atttatggtt ggcacaataa attcctttct ttgaaaatgt aataaacttt ggataatatc
     8581 taaattttgc ttatacttta gttaaaaaga tttaaataaa gaaacataac cctaaaaagg
     8641 gctatgaaat aaaaaattat tcttgttctt taagttttaa attttgttcg ccataaagcc
     8701 ctgttccaac aggaatcatt ctacctaaaa taacattttc ttttagatct tctaagtagt
     8761 caaatttacc tgcaatactt gcttcggtta gaactttagt ggtttcttgg aatgaagccg
     8821 cagaaattac actatcactt ccaattgctg ctcttgttac ccctaaaagc acaggttcag
     8881 caatagctgg ctctccaccc attctaatga ttctttcatt ttcttcacgg aatttacgtc
     8941 ttgaaaccaa atcaccttcg ataaatttcg tatatccact atctacaact tttacttgtc
     9001 ttagcatctg agaaacaata acttctatat gcttatctga aatcacaaca ccttgcccac
     9061 gataaacttg ttgaatttca aaaatcaaat aataatgcaa ggctttttcg cccaaaattt
     9121 taagcacatc atggcttgaa acaacaccgt ctgtaagttt ttcacctgca tgaataaact
     9181 caccatctct tacttgaatg tgttttgatt tgtcaattaa atattctgca cttgtaccat
     9241 cttctgcttg aataataatt ctttctttag aacgcaaagg cttatcaaaa cgaaccacgc
     9301 catcaatttc tgcaatcacg gcagcatttt ttggttttct tgcttcaaaa agttcagaaa
     9361 ctcttggaag accacctgta atatcttttg attttgccgc agcttttgga gtttttgcta
     9421 aaatatctgc ttgagaaatt ttatctccat catgaacaaa aataacggtt tttggctcta
     9481 attgataacg cactgcttta tcaccttttc ccgcgattac caaagtcggt ctaactccac
     9541 ttggtaaata ctcattaatc accaaagaac gcttacctgt agcttcatcg atttgttcat
     9601 cagcactata acctgcttca atgtcttcaa aacttaccac cccatcaatt tctgcaataa
     9661 tagtattgtt ataagcatcc cattctgcaa tcactttttt ttctttttta ggcgcacttg
     9721 caatgatagt atttgcatca tcaatttttt cactatcgtt aaattctatc ttagattctc
     9781 ttggaatata atgtcttttt gcttctctat cattttcatc agcaatcacc acaaagaaac
     9841 ctttttcctt aacgatatca ccttttttaa cactttttac tctatctaag ccatcgcctt
     9901 taaggatata aaatttaagt attccctttt cccctgcttt gatattttgg actacaggct
     9961 caccatcttc tactaaaatt tcactcgcaa aaggaatacg atttggaaca ttccaacctt
    10021 ccttaatcac ctctacaata ctttcatttc catctacttg cataccactt tggtatggta
    10081 gataaagttt tccatctata cttccactca caccagctaa ttcatttggt ttagcaagat
    10141 cgtattttct tagtatgtat tttacttctt gttttttatc tttaatagaa acaatcacat
    10201 cttcatgaat attttctata ttaatcacac ctttaaacgg agctttgatt tttggttcta
    10261 caagtaaaat cgctgcattt ctgcgattgg ctacgatatt tttaccttct ttgtttttat
    10321 aggttttaag attgtaaaat cttataaaac cttctttttg cgcactaact tgtctatctt
    10381 gtaaatccgt agttgctgtt ccaccactat ggaaagttct tagggttagc tgcgttcctg
    10441 gctcgccgat agattgcgca gagataattc ctactgcctc acctggtttt actaacttac
    10501 cttcaccaag attaatacca taacatttcg cacaaattcc ttttttagct ttacaagtga
    10561 taggagtacg gatatttacg ctttttatac cactttcacc aagaattttt gctttttcct
    10621 catccattaa agtaccttct gcaaaaagta cagaatttgt aataggatca atcacatctt
    10681 cagctaaaac cctacctaaa attctttctt ctaaagtttc tatgatagaa ctatctgcag
    10741 tgatttcatt gatctcaaca ccctcatgtg tttcgcaatc ttcaatagta atttttacat
    10801 tttgtgctac atcaataagt tttcttgtta aataacctgc atttgctgtt ttaagagcag
    10861 tatctgcaag accttttcta gcaccatgag ttgaaataaa atactcaaga acatttaacc
    10921 cctcacggaa attcgaaata ataggcgttt caacaataga tccatcaggt ttagtcataa
    10981 gccctctcat cgcagcaagt tgagaaattt gagctgcact acctctagca cctgaatctg
    11041 ccatcatata aatagaatta aagccttctt tgtctttttc tataagtttc atcatctctt
    11101 ttgaaaggac attgtttgta cttttccaaa tatcaataat tttattatat ctttctcctg
    11161 aagtaatcaa accaagatta taagaatttt gaatttctct tacttgtttt tttgcttcat
    11221 caatagcttt ttgcttatca ttaggaacaa taatatctgc aatcgaaatt gaaatacctg
    11281 ctttagttgc atactcaaaa cctaagtttt taagtctatc taagaaactt gccgtaatct
    11341 ctaagccacc ttgtttataa acataatcta caagtgcagc gatatctttt ttctttaaga
    11401 ctttattcca actgttttca ggcacaaaat caggtaagat ggatttgata atcaatcttc
    11461 ctgccgtagt ggtaatcttc ctgccatcta ccatagtttg tatactagcg tgaatatcta
    11521 agcacttgct ttcaagcgcc atcatcactt catcaatacc ggtgcaaatt ttatgcgaac
    11581 ctttagcacc tgctttttct aatgaaagat aataaatccc taaaaccata tcttgagatg
    11641 ggacagttac agatttaccg cttgctggta aaagaatatt cattgaagaa agcataagta
    11701 ctttacattc tgcgatggct tcttgagaaa gtggtacatg caccgccatt tgatccccat
    11761 caaagtccgc attaaatgcc gcacaaacta aaggatgaag ttgtatagct ttaccttcta
    11821 ctaaaacagg atgaaaagct tgtatagaaa gcttatgtaa agtaggtgca cggtttagca
    11881 taacaggatg tccttttacc acctcttcta aacattccca aacttcattg gttttgtttt
    11941 ctatcatttt tttagcttgc ttcactgtgg ttgcataacc tttttcttca agcttagcca
    12001 aaagatgtgg tttaaaaagc tctaaggcca tttttttagg caaaccacat tgatccattc
    12061 taagttttgg acctacaacg ataacactac gacctgagaa atccaccctt ttaccaagca
    12121 aattttgcct aaaacgccct tgtttacctt tgatgatttc acttagagat tttaatggac
    12181 gcttatttgc cccttttaca gcattagcac ggcgaccatt atcaaaaagt gcatcaacag
    12241 cttcttgaag cattcttttt tcatttctta taatgatttc aggtgcatca agctccataa
    12301 gttttttaag acgtgtattt ctgttaataa cacggcgata caaatcatta acatcagaaa
    12361 ccgcaaattt tccaccatct aaagctacta aaggacgtaa atcgggtggt aaaactggaa
    12421 gatttgtaat catcatccat tcagggcgat ttggcactgc ttcatcatta tcggtattgg
    12481 catttaaatt tgaatttaaa aaattttcta caacttttaa acgtttaata atagtttttt
    12541 tcttagcctc tgaatttgta gctgccattt cttttttaag ctgatttaaa agtgctacaa
    12601 gatctaaatt tgcaagcaaa tcacgaacaa cttcaccacc cattcttgct ttaaagccac
    12661 tattttcata gcgttgcatt aaattttgat attgctcttc atttaaaaca tcgcaatgct
    12721 ctactttttt agtgctttca ttatcataaa aagcatcacc tggattttca acaatataag
    12781 cttcataata aagcacgcgc tcaagatctt tcatcttaac acctaaaagt gttcctatac
    12841 gacttggaag agaatttaca taccaaatgt gagccacagg agttacaagc tcaatgtgcc
    12901 ccattctaga acgacgcact tttgaattag ctacctcaac accacatttt tcacacttaa
    12961 cgcctttaaa acgcattttt ttgtatttac cacaaagaca ctcataatct cttataggcc
    13021 caaaaatctt tgcacaaaaa agcccatctc tttcaggctt taaagttcta taattaatag
    13081 tttctggttt ttttacttct ccataagacc atgatttgat tttttcagga cttgcgagtc
    13141 taagttgaaa tgcttcaaaa tctctaggtc ttgtatcctc tttaatttct attactttaa
    13201 atttactcat tatcttcatc cttatcaaaa atctcaacat ctaaagcaag agacttaagc
    13261 tcattggtta atacaaaaaa tgtttcagga attcctgttg ctggaacatt ttcacctttt
    13321 gtcaatgctt tataagcact aaatctacct tctacatcat ctgattttat ggttaacatt
    13381 tctcttaaag tatgagctgc tccataagct tcaagcgccc aaacttccat ttctccaaat
    13441 ctttgaccac caaaaagtgc tttaccacct acaggttgtt gagtaattag actataaggc
    13501 cccgtgcttc ttgcatgaac tttttcatca actaagtggt ggagttttaa catatacata
    13561 caccctacat gtacgcgttc tgcgattttt tcacccgtac gtccatcata aagctctgtt
    13621 ttaccatcca tatctatctt agccatttca aaaagcttgc taaattcttc tatatttaca
    13681 ccttcaaaga caggagttgc aaatttaacc cccttgctcc aatctctagc ataatttaaa
    13741 agctcttcat cacttaagct tttgataaat tctttttcac ttgaaagtct tggaatagaa
    13801 caaatttcga gcatttttat tcttaattcc ttaatgaaat ctttttgctt tctgtcaaaa
    13861 atttcttgaa tttgatctcc gagtctaagt ccgattaaac ccaaatgact ttctaaaatt
    13921 tgccctatat tcatccgact tggaacgccc agtggattaa gcgcgatatc tacactttta
    13981 ccatttggca aataaggcat gtccacttca ggaactatag ttgaaactat acctttattt
    14041 ccatgacgtc ctgccatttt atcaccaact ttgagttttc tttttgtagc tatataaact
    14101 ttaacaagct taatcactcc acttggtaaa atatcatctt tttctaaaat ttcaagcttt
    14161 tcatcatgct ctgcttttaa ctttttcttc tcgttttgga aatgattttt caaattatca
    14221 tattcttttt gaatctcttt agaataagct ttaattaaag ttgttaaagt aaaacgatta
    14281 attttttcaa gctcacttgt atctgcagtt tgtccttttt tataattctt atccccaatt
    14341 ttttgatcgc tatttaaagg agctttagaa agaagagaac aaacacgaag catttcttct
    14401 ctatctatca tcaaaagtct atcatgatgc tctttttcca aagccatttt ttctttatca
    14461 taagatttta ttgcacgatc atctttctcg taaccttttt tggtgaaaat cttaacatca
    14521 actaccacac cttccaaaga agcggttgca taaagagatt tatttacaac atgccctgct
    14581 ttttctccaa aaatcgccct taaaagtctt tcttctggag ttggtttaac ttcacctttt
    14641 ggagaaacct tacctactaa aatcatgcct ggcttgatgt gagtaccaat ttttgctata
    14701 ccactctcat caagatgagc aacatcttct tcttttacat ttggaatatc tttggtaatt
    14761 tcttcaatac cgtcttttaa ttctctagct tcaatttctt tttcataaat atgcacgctt
    14821 gtaaaagtat cctcacgaat aattctttcg cttacaacga tagcatcctc ataattataa
    14881 ccattccaag gcataaaagc aatcaaagca tttttaccta tagcaagctc accttgatcc
    14941 atagaggaac catctgcgat aatttgtcct gcttttacca catcaccttt tttaacaata
    15001 gggtgttgaa tataatttgt attttgatta gttcttaaat ttttctccat agtataatga
    15061 tcgataaatg aacccttgtc atcttcacct aaaatgaaaa tgcttttatt atccactttc
    15121 tcaactacgc ctccacgctt tgctttaaca gcttcccaag catctcgtgc aataatttgt
    15181 tccatacctg ttcccactat aggagctgaa gcggtaagaa ggggtacagc ttgacgctgc
    15241 atgtttgagc ccattagtgc cctatttgca tcatcatgtt ctaaaaacgg aatcaaagaa
    15301 gctgcaaccc caacaaccat acctgaacaa aggtcgatta attgcacttc ttcgcgtctt
    15361 gcaagtatag tttcgccatc ttgtctagct tcaacaaatt cttctactat attgccttta
    15421 gcatcaatct tagttgaagc tggagcaata aataaaccct cttcttgtgt tgccgtaagg
    15481 taaactactt cattagttac tttgccattt tcaacttttc tataaggtgc ttcaacaaaa
    15541 ccaagttcat ttactttcgc ataagtagaa agagtattaa tcaagccgat attttgaccc
    15601 tctggagttt caacaggaca aattctacca taatgtgttg catgaacatc acgtacttca
    15661 aagcctgctc tttcttttac aagtccacct tcgccaagag ccgataaacg acgcttatga
    15721 gtaacctcac ttaaaggatt ggtttgatcc atgaattgtg aaagttgacc gcctgtaaaa
    15781 aattcaagta tagttgtggt aatcatttta ggattgatta aatcataagg cattacctta
    15841 tctagatctg catttaaaga agtaaattta tctctaatag ccttttgcat ttttgcaaga
    15901 cctaaatgaa gttcattggc tagaagttca cctatagaac ggatacgacg atttcctaga
    15961 tgatctctat catcaatatg tccttttccg ttttttactt taattaaata ttttgcagtt
    16021 ttaataatat cttcattggt taaaacagta acatactcag gtacttcaag acctaattta
    16081 tgattcattt tcatgcgacc tactttagta agatcgtatc tttcagggtt aaaaaataaa
    16141 tcatttacaa aagcttttgc tgcatctttt accacaggtt cacctggacg cataacctta
    16201 taaattctaa tcgcagctaa atcattttca tcatcaatat tttcactttg tttaagaagt
    16261 tttaaagttt caccatcttg tgcaaaagag ttaataatcg cagcatcaac accattagcc
    16321 aagtcatttg ctatatcaaa acttttttgc tctttaatct tggcaagctt actctcatcc
    16381 aataaagtca aagaatcaaa taaaacctct ccactttctt tatcgataat aggatttgcc
    16441 aaataacgat ttaataaaat ctctacagga tattctatcc attttaaacc atctttgata
    16501 agctgctcag cttttttctt tgtgagtctt tttccagctt gatgaacaat tttacctttt
    16561 tcatctttaa tatcgtattc tattctatcc ataaaatcat ttggattaaa ttctgttaaa
    16621 aatttatcct tttttacatg tatagtctgg atagggtaaa ataatttaat aatatcttgt
    16681 tttttataac ctaaggctct aaaaagcata gttacaggag tttttctacg cttattaatt
    16741 ctcacatata aaacatcttt agcatcatat tcaaaataca gccaagaacc acgatcagga
    16801 atgatttgtg ctgtataaac aagtttattt gcaaccgttg aactttcttc ttctttgaag
    16861 ataacaccag gacttctatg cagttgattt acaaccactc tctcaacccc attaatgata
    16921 aaagatacac gatcagtcat taaaggaatt tcacggatgt aaatttcttg ctctttaata
    16981 tcttttacgc caactttttc ccctgttttt tcatcttttt catgcagagt aagacggatt
    17041 ttcattttca aatttacaga ataagttaaa cctctttcca tacattcgcg aatggtgtat
    17101 tttggtttgc ctatttcgct gctaacatat tcaagactca atctattttg cggatcgtga
    17161 ataggaaaaa ttgatttaaa aactttttct ataccacttt caccattatc aagatttaaa
    17221 aaataatcaa aactcttttt ttgtaattgt agaagatttg ggatttctat ttgttttgaa
    17281 atgtttgaga agtctactct taaacgattt cctaatttat tatctaacat atcgcacata
    17341 cctcatggta aattttgtaa atttaaaaaa gaagacctaa aaattaggta aaaataaaaa
    17401 aagaagactt gccttagcaa atcttcctca aactttaaag cttaaattac ttaagttcta
    17461 ctttagcgcc agcttcttca agttgttttt tagcttcctc agcttcagct ttagctacac
    17521 cttcttttag agttgaagga gtttgctcaa ctgcatcttt tgcttcttta agaccaagac
    17581 ctgtaagagc acgaacaatt ttaataactt cgatcttttt agcaccgcca tcagttaaaa
    17641 caacatcaaa ttcagttttt tcttcagcag ctgccgcagc gccaccagcc gcagcgccac
    17701 cagctaccat tacaggagca gcagatacac caaatttttc ttcgaattct tttacaagtt
    17761 ctgataattc aagaacactt agatttgaaa tatattctaa tacatcttct ttagagattt
    17821 tcatttttta tcctttattt tgttttattc agattctttt ttatttttaa gcgcatttaa
    17881 acctattgtg aaattggtaa ttggcgcatt ccaaacttgc aaaagcatag caagcaactc
    17941 gttgcgtgaa ggcattttag ctagagcttt aaccttggca acatctgcaa cttcgccttc
    18001 aatatgagct gttttgattt caaatttatc attattttct tcaaatttag cagctacttt
    18061 tgaaacgcta agttgatctt cgccccaaag ataaatattt gtatctttaa gaactagacc
    18121 tgttttaccg gaattactaa gagcaatgtt agccaaagta tttttaacaa tttgaacttt
    18181 tacattattc tctcttgcgt tatttctaag ctcttcaagt ttttttgtac taagacctct
    18241 gtaattacaa actacaatag cttcactagc tttaaaacct tcttcaagtt tagcaataat
    18301 ctcaactttt tcgcttctag tcacattttc tcctttccga ttgagatttc aagtagagcg
    18361 gaaaatccga ttaagcttaa cgcctcgact atcttcaatc taaaataaac atttcaaaaa
    18421 attaaaaatt ttttcaaatg tttattttaa aacataagag ttgccagtaa acaactctta
    18481 tttcatatca agcaattctt gtgtttcaag ttttacagaa ggactcatcg tcaaagataa
    18541 agctgcattc ttaatatatc tacctttggc tgcagcaggt ttatgtttgt taattgcttt
    18601 tacaaaagcg ctaatattat cccataattg ctctttggaa aaacttactt taccaagacc
    18661 tgcatggata tttccttgtt tatcaacacg gaaatttacc tgaccgcttt ttgcattatt
    18721 aacagcttga gcaacatcca tagtaactgt tcctgtttta ggatttggca ttaaaccttt
    18781 tggtcctaaa atcctaccta ctttacctac aagtcccatt aaatttggag tagcaatcaa
    18841 aacatcaaaa ttcatattgc ctttttgaat ttcttctacc aaatcatcgc tacctacaat
    18901 atctgcacct gcattttttg cttcatcagc ttttgcatct tttgcaatta cagcaacacg
    18961 aactttttta cctgttccag caggtaaaac aacagatccc ctcaccattt gatctgcatg
    19021 tcttggatca acattaagct ttaaagcaat ttctacagtt tcatcaaatt tggcagactt
    19081 taaagtcttt accatatcaa ttgcatcact taaagcatat tctttatttg aatcgatttt
    19141 ttgtgacaat tcttttaatc tttttgctat tttagccatt tattttctcc gcattttaaa
    19201 gtgctaccgc cttttacctt ggcggtgaaa ggattaatct acaatttcaa cacccataga
    19261 acgagctgaa ccagcaataa tttttgctgc ttgatcccta tctttagtgt ttaaatctgc
    19321 aattttctta tccactattt ctaaaacctg agcacgagtt aatttaccca ctttattttt
    19381 aagtggatta tctgtaccct tagaaattcc agctgctttt ttaattaaat cagtagctgg
    19441 tggttgtttt gtaataaaag taaaactttt atctgcataa acagtgataa cgacagggat
    19501 attaaaacct gccatatctt ttgttctttc attaaaagcc ttacaaaact ccataatatt
    19561 aacgccttgc tgacctaaag caggaccaac aggtggtgat gggtttgctt ttgtggcagc
    19621 aatttgcaat ttaatttcgc ctacgacttt tttagccata acaaatctcc ttacttgata
    19681 taaattaaat tattttctca acttgagaat ataagatctc cactggagtt gagcgtccaa
    19741 aaatagaaac attaagcttt aataaaccac gaaccatatc atattcttcc acaattgcag
    19801 taaaatttgc aaatggcccc tctataattc ttacattttc cccttcttca aaagaaatct
    19861 ttggtttagg cgctgcacga ttgtgaactt tttccaaaat caaattaata tctttttccg
    19921 ttaaaggggt tggttttttg gattctccaa taaaacgacc aacttttgga agagattgaa
    19981 tgcgatgcca aagttctgta tttaaatcaa gaagtgcaaa aacatatcct gaatataaac
    20041 ttctttcact aatcttttct tttccattct taaattcaat aacatcttca gttggaacaa
    20101 caatttcttt aagttgctct tcaattccgt tatcttttac taaattttca atggctcttt
    20161 taactgccat ttcactacca gcataagtct gaattgcata ccatttatga gtactcattt
    20221 gttctcctta tacaatcgca gaaacaatag aggacataat ccaatccact aacgccaaaa
    20281 acaaagaaac taccgcaaca actacaaaaa ctgtaatata agcatttctt acctgttctt
    20341 tcaaaggaaa aattactttc cttaattcgg cttttgataa tttaaaataa gttattaatt
    20401 tttccattta tttaaacctt aattatggca gggcaagagg gattcgaacc cccaaccatc
    20461 ggatttggaa tccggcgctc taccgttaga gctattgccc taaggcacaa gcttaacttt
    20521 ttaacttaac ttctttatga agtgtgtgtt tttttaatct tggacaatat ttttttaatt
    20581 ctaatttttc agtagtattc ttactatttt tataggtact ataattaata tcaccacatt
    20641 cttcacactt taaaccaact ttaattctca tttaattttc cttaaaaaaa gccaagcatt
    20701 caacttggct ttgttaaatt atttaataat tttagaaaca acacctgaac caacagtttt
    20761 accaccttca cgaatagcaa aacgagtacc ttcttcaagt gctactggag caatcaaact
    20821 tacagtaatt cttacatttt cgcctggcat aaccatttca acaccatcag ctaacttaat
    20881 tgaacctgta acgtcagttg ttcttacata aaactgtggt ctatagttat taaagaatgg
    20941 agtatgtcta ccaccttcat ctttattcaa aatataaact tcagcttcaa aatctgtatg
    21001 tggagttatt gattttggtt tagcaagaac cataccacgg ataacttctt cttttttagt
    21061 tccacgaaga agaacaccta cattatcccc tgcttcacct tgatccattt cttttctaaa
    21121 catttcaaca cctgttacag ttgttgtttg agtatcttta attccaacga tttcgatagt
    21181 atcgcctact tttacaacac ctttttcaat tctgcctgta acaacagtac cacgacctga
    21241 aattgagaaa acatcttcaa ttggcattaa gaaatctttt tcagtatcac gagttggagt
    21301 tgggatatag ctatcaactg cagccataag atccataatt tttgctgacc attcgccatc
    21361 ttgtccagct ttagcttctt caagagcttt taaagcagaa ccagaaataa taggcgtatc
    21421 atctcctggg aaatcataag agcttaataa ttctctaatt tccatttcaa ctaattctaa
    21481 aagttcagca tcatcaacca tatctgcttt attcatgaaa acaacgatat atggaacacc
    21541 tacttggcga gaaagaagaa tgtgctctct agtttgtggc ataggaccat ctgcagcaga
    21601 aacaactaag attgctccat ccatttgcgc agcgcctgta atcatgtttt taacataatc
    21661 tgcgtgacct ggacagtcaa catgtgcata gtgacgattc tctgtttcat attcaatatg
    21721 agaagtagca atagtaatac cacgttcttt ttcttctgga gcattatcga tattatcata
    21781 atctttaagc tctgccaaac ctcttctaga tagaacagca gaaatagcag ctgttaaagt
    21841 agttttaccg tggtcaacgt gaccaatagt accaatattt acgtgtggct tattgcgtga
    21901 aaatttttct ttagccattt ttttcctccg tataaaaata aattgagcaa agcaagtctt
    21961 atatttatat aattttttca attcatggag ctcatagcgg gaattgaacc cgcgacctct
    22021 cccttaccaa gggagtgctc tacctctgag ccatacgagc gctcagaaaa attatacaca
    22081 ataatagaca acaaaaactc ttaatgggat atttactgta agttaaaggt taaaatacag
    22141 ctcccagttc ttttaaatta ttggagcggg aaacgggact cgaacccgcg accctcagct
    22201 tggaaggctg atgctctagc caactgagct actcccgcaa agcatggtgg tgagtcgtgg
    22261 attcgaacca cggaaggcga aagccagcag atttacagtc tgccctcgtt ggccacttga
    22321 gtaactcacc ataaaaatat tgctttttca atattctggt caaacactgc taaaataaat
    22381 ggagctggtt aagggacttg aacccccgac ctgctgctta caaggcagct gctctaccaa
    22441 ctgagctaaa ccagcaaaaa tgaaattgag attataactt aaaaaaaaga atttgtcaag
    22501 acttttttag tttttacata aaatttttag ctctttcaa
//
LOCUS       DAPWAA010000024        21495 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.024, whole genome shotgun sequence.
ACCESSION   DAPWAA010000024 DAPWAA010000000
VERSION     DAPWAA010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21495
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.024"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..441)
                     /locus_tag="RTF91_000849"
     CDS             complement(<1..441)
                     /locus_tag="RTF91_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943748.1"
                     /translation="MVYEIQKNFLLSDCTLLENLRNDNIPFKNYEFETFYTQITPNYS
                     VKFQSFCNEFYKITKFNNLILEQNQEEKISKKKFEKARKKIIGKSIKKERFEFKFCSL
                     KSYIDIYEESRICILKVFFPTLDNASEFKVPKDFKIQKELRHDLN"
     gene            complement(487..897)
                     /gene="perR"
                     /locus_tag="RTF91_000850"
     CDS             complement(487..897)
                     /gene="perR"
                     /locus_tag="RTF91_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HDZ4943749.1"
                     /translation="MELLQMLKKHELKATPQRLCVLKILKRHEHPNIDELYAEIKKEY
                     PSISLATVYKNLNTLQEQGLVVEINVLNQKTCYDIYEEEHIHVICAKCGNIEDLSFKE
                     AKFYEYQEHLEKKIGNLINHLSVCAYVDSCKKCH"
     gene            complement(978..2828)
                     /locus_tag="RTF91_000851"
     CDS             complement(978..2828)
                     /locus_tag="RTF91_000851"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDZ4943750.1"
                     /translation="MSKKFAHSQEELEKLSLKELENLAASIREKIIQVVSKNGGHLSS
                     NLGAVELSIGMHLVFDAKKDPFIFDVSHQSYTHKLLSGKGEIFDTLRQINGLSGYTKP
                     SEGDYFVAGHSSTSISLAVGACKAIALKGEKRIPIALIGDGALSAGMAYEALNELGDS
                     KFPCVILLNDNEMSISKPIGAISKYLSQAMATQFYQSFKKRIAKMLDILPDSATYMAR
                     RFEESFKLITPGLLFEELGLEYIGPIDGHNLGEIISVLRQAKAMQKPCMIHAQTIKGK
                     GYALAEGKHAKWHGVGAFDIHSGESIKKSNTKKSATEIFSKNLLDLASKYENIVGVTA
                     AMPSGTGLDKLIEKYPNRFWDVAIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQ
                     VIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDVSFLAPLPNFTLLAPRDEQMMQNI
                     MEYAYLHQGPIAFRYPRGSFILDKEFDPCEIKLGKAQWLIKNNSEIAFLGYGQGVAKA
                     WQVLRALQEMGNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIETLINN
                     FLQRYDLHVKVVSFEYEDKFIEHGKTSEVEKNLQKDVNSLLTKVLNFYIK"
     gene            complement(2821..3651)
                     /gene="fliH"
                     /locus_tag="RTF91_000852"
     CDS             complement(2821..3651)
                     /gene="fliH"
                     /locus_tag="RTF91_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HDZ4943751.1"
                     /translation="MVNRSNVISGGTSEQHVVEGYRFKVISEFDNHAGEKKHTQALDE
                     ENVNTPLNDEKPVEDNQTLVSTQVSPEAQAPAFQSSFVEDLLKKTDEMSSNIIKLQMQ
                     IESQENEFNNRLNSELENAKEKFIKEGYDKAKEEFQKELSDFKDKYLKSIAKLDNACE
                     NLENFIEKNEKELADTAIDIAKEVILKELELNSSKIAYALAKDLIGELKGASAIELKV
                     NTEDYEYLKEQFGQNAHIKVSLDDAISKGSVVIISDAGNIESNLNSRLTKIKKMVNNE
                     "
     gene            complement(3659..4687)
                     /gene="fliG"
                     /locus_tag="RTF91_000853"
     CDS             complement(3659..4687)
                     /gene="fliG"
                     /locus_tag="RTF91_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HDZ4943752.1"
                     /translation="MIKLSEEQKMVYDDLSMPEKVAIFLIQLGEDATTSVFSHMEIDV
                     ITEISRYIAMAKNVDRSVATAVLEEFYTLLQSNQYIKSGGLEYAKEILFRTFGPEIAN
                     KILEKLTKSLENNQNFAYLAQIKPQQLADFITKEHPQTIALILAHMDSIHAAETLEYF
                     SDELRAEVVIRMANLGDISPNIIKRVSAVLESKLESLTSYKVEVGGPRAVAEVLNRLG
                     QKASKSTITYIEQSDERLAETIKELMFTFDDIQKLSVQAIREILKVADKRDLMIGLKG
                     ASEELKQKFLANMSTRASEAFLEEMGFLGAVRVKDVEDAQRKVVEVVQKLAEQGLVQT
                     GDADEMIE"
     gene            complement(4687..6369)
                     /gene="fliF"
                     /locus_tag="RTF91_000854"
     CDS             complement(4687..6369)
                     /gene="fliF"
                     /locus_tag="RTF91_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HDZ4943753.1"
                     /translation="MDFKNMFHQIGQLYQNLTRKQRIVIAASIVVVVGFLVFLALFRG
                     SGGNANNGYAVLVENVSPSSSAAIVAKLEQNNIPYKLESENKILVPQDQVYRQRMFIA
                     SEGLIKDSRVGFEAFDTQAFGATSEEQKVKYQRAIEGELARTIETLEPIRNAVVHIAF
                     PKDSVFTERQIPPTASVVVNVREGLKLTRKQIDGIKNIVSAAVPKLTKENVKISDQSG
                     VPLDEQEAYEDDLVRAQIKFKSDQEKALEDKIIENLAPFAGGMDKVKVSVNIDFDFSK
                     QESQSEIYDPNPIVRSEQTLNEEKTGRKDPEIQGVPGAVSNIGPVEGLDNKGQIDTYK
                     KNQVTTNNELSKTITNIKKQFATVLRTSAAVTIDGKYQDVVDENGDVKSEYVPLTKEE
                     LASVESIVKNTINFSATRGDSVVVQNLPFHRESIRVESKVKTFYNRFVEPFIPPVKYF
                     IAAILLFIFYKKVIAPFTQKMLEDVAAQEEMQQGPSAVLDDAEDALEKFNAARKKVEE
                     QLGFGDNFNEDSIQYEVLLEKLRGLVSDKGEEIAALLQNLIQNDSEFGEKDM"
     gene            complement(6423..7517)
                     /locus_tag="RTF91_000855"
     CDS             complement(6423..7517)
                     /locus_tag="RTF91_000855"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDZ4943754.1"
                     /translation="MKFNEFLNHLSNYEPGKDIEVIAKEYDVKEVIKLASNENPFGTP
                     PKAIESLKQNANKAHLYPDDSMIELKSKLAQKYKVQNENIIIGAGSDQVIEFAIHSKL
                     NSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHDLNEFKKLYEAHKDEIKIIFLCL
                     PNNPLGECLDASEVIGFIKGVDKDCLIVIDAAYNEFASFKDSKKHLEPYELIKKFENV
                     LYLGTFSKLYGLGGLRIGYGIANVSIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTK
                     KTLENNFSQMELYKKFAKKYNIKIIDSYTNFITYFFYEKNSTDLSEKLLKKGIIIRNL
                     KSYGLNAIRITIGTSYENERFFTEFDKILN"
     gene            complement(7507..8580)
                     /gene="pheA"
                     /locus_tag="RTF91_000856"
     CDS             complement(7507..8580)
                     /gene="pheA"
                     /locus_tag="RTF91_000856"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HDZ4943755.1"
                     /translation="MSNLEEFRNKIDTVDDKILELLNERMTYVKSIGELKQSSGGAIY
                     RPERERAIINRLKNANLGLLDQNAIEAIYQEIFAVSRNLEMPQAIAYLGPEGTYTHQA
                     ARSRFGAMSRYIALANIEDVFKELSNKEAKYGVVPIENNTEGAVGITLDCLGKYNELK
                     IFGEIYMDIHHSFVGINENLKEIKRIYSHPQGYNQCRKFLESHELSAIEFVPSKSTAN
                     AAYLASQDKYAAAICSKIAAKLYNVPVLFDKIEDNAANKTRFLILSDIKNPKMPNCKT
                     SILAHTAHKPGGLSFLLEQFKKENINLTKLESRPIKSKEFLHSFYIDFEGHIDDENVK
                     KALKDIQEIVWLGSYLSGEKDEI"
     gene            complement(8568..9335)
                     /locus_tag="RTF91_000857"
     CDS             complement(8568..9335)
                     /locus_tag="RTF91_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HDZ4943756.1"
                     /translation="MFFLDVQGTLISDYDKSLIHGAKELIDFLNIKNLSYVIITNNTK
                     KLDFLEKLQQKGLAIKENAYIDPFSVLKHILQPCKVAAFGADEFVKSLENLGFELDFV
                     NPSAVLVASYDDFKFKDFASMIEFARREVRFIAMHEASVYKKDGRPYPGVGSIMVMLK
                     NAIDFEYEVVGKPSIAFYKEALNLIRRQNSRIDFEDIRIISDDFKGDLLKAKELGMKT
                     LLVLSGKISDTKRLDTDLLDGIYPSVFEFLKELKCQI"
     gene            complement(9337..10545)
                     /gene="lysA"
                     /locus_tag="RTF91_000858"
     CDS             complement(9337..10545)
                     /gene="lysA"
                     /locus_tag="RTF91_000858"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDZ4943757.1"
                     /translation="MDYKQLRQEFNTPFYIYNFDSIKERFLNLKDAFKARKSQIFYAV
                     KANSNLSLLQMLANLDSGFDCVSIGEVKRVLKAGAKAYKIIFSGVGKTKEELKLALEY
                     DILYINLESEAEMMLLESVAKELRLKARISIRVNPNVDAKTHPYISTGLNENKFGVEI
                     DIARKMYLYAKNSSFLEPVGVHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKF
                     FDIGGGLGVAYEKDECEPDLYNYAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVL
                     YEKQNKTKRFIVVDGAMNDLIRPSLYEAYHEIVLPYNQSEENLCDVVGGICESGDFFA
                     KARSLPSTQSGDIMVVKNTGAYGFSMSSNYNTRNKVCELALEEGQVRLIRQRENFQDQ
                     IALEEKFLKA"
     gene            complement(10589..11647)
                     /locus_tag="RTF91_000859"
     CDS             complement(10589..11647)
                     /locus_tag="RTF91_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDZ4943758.1"
                     /translation="MWIFFRFISGVYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAAN
                     LNLLYIMFLCFSAVPYVLPISLIFALVVSLISMIRANEFVSLYALGLSKNYVVLFPFL
                     WALFFCCIYIGLNFTSFAYANDYKRNILKNGTIMTQSGEVFLKFNNNFVYISKINNGQ
                     NSAQNIKIFNINDSNLSSFISAKNAYFEGESWILRDGNITLLPKNYELANDGLKIKDF
                     SQLKSLDGFKPKIIEGVASNSDYSISDALESFELFRAQNVNTDALRINLYKFIFTPFF
                     APFLMLIMYYFFPIIARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIV
                     IPIIILGCLSAYMYYKHR"
     gene            complement(11649..12194)
                     /locus_tag="RTF91_000860"
     CDS             complement(11649..12194)
                     /locus_tag="RTF91_000860"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDZ4943759.1"
                     /translation="MILVVGLGNIGAEYENTRHNVGFMLIDLLLKENNSINLTNSKFK
                     GELFKISSSLLLLKPSTYMNNSGLSVKAVNDFYKCERIIVIHDDIDINLGALRFKKGG
                     SSGGHNGLKSIDSLCGSDYERVRIGVGKGENVISHVLGKFKSEEEIILSKVLENAKEA
                     LLELIRNDDLSAISSKYSLKA"
     gene            complement(12191..12727)
                     /locus_tag="RTF91_000861"
     CDS             complement(12191..12727)
                     /locus_tag="RTF91_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDZ4943760.1"
                     /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNE
                     FIKEVRKKTTLIFDVKVGSKTLSVVVVDYQKDPVTAELKHVDLKVAQKDVISKYMVPV
                     KITGTAIGLKNKGVLIQSKRRLKVKCTAENLPNFFELDVSKLDVGDALLVRDIVVPKG
                     VTMIDADRVAVVGVEKAR"
     gene            12863..13204
                     /locus_tag="RTF91_000862"
     CDS             12863..13204
                     /locus_tag="RTF91_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDZ4943761.1"
                     /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWHYILTAIGV
                     CISFTCFLKACEKLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSITKLVLIAILLLSI
                     IALKWVSKEAK"
     gene            13204..13518
                     /locus_tag="RTF91_000863"
     CDS             13204..13518
                     /locus_tag="RTF91_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDZ4943762.1"
                     /translation="MEWFYLFLATACEIFGVVIMKELVNTKNKLYLLALIICFGFSFT
                     FLSLSMQNIAMSVAYAIWTGAGTAGGVMIGILFYKESKSFLKLSLIAMIISCTVGLKF
                     LS"
     gene            13529..14119
                     /locus_tag="RTF91_000864"
     CDS             13529..14119
                     /locus_tag="RTF91_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDZ4943763.1"
                     /translation="MQIFVSGVHTDVGKTHFSAAFCANFNYDYFKLVQAGTPTDSEFI
                     AKFSPKTKIFKEGVFLQTPASPHLGKIKEKLDYKALELNLPKSENLLIELAGGLFSPI
                     DEKYTMIDFMALHKKASILVAKYYLGSINHILLSIEALKQRNIELLALVMMGKKDILQ
                     DNFIKNYTQISIINLDFFDKNNILNQNFKEQIQEIL"
     gene            complement(14121..15404)
                     /locus_tag="RTF91_000865"
     CDS             complement(14121..15404)
                     /locus_tag="RTF91_000865"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDZ4943764.1"
                     /translation="MQSEILKNLDLKHIWHPCTQMKDHENLPLIPIKKAKGVWLYDFD
                     DKAYMDCVSSWWVNLFGHCNEKIANAIKKQVDDLEHVILAGFSHEPIIKLSARLCEKV
                     GREFNKCFYADNGSSAIEVALKMSFHYHLNKGLKKNKFLSLSNSYHGETLGALSVGDV
                     ALYKDTYKALLLECLSTPVPQNKDYTKELEILKDILEKYSSEICVFILEPLVQCAGNM
                     HMYEAHFIDEAIKLCHEFNVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITG
                     GFMPLSVVLTKNEIYNAFYAPYSEQKAFLHSHSYTGNALACAAANAVLDIFENENILE
                     KNQILSIFIQQEFSKLKKFDFLGNFRTCGMISAFDILSTKYERVGLFVFQRALEKGLL
                     LRPLGNTIYFMPPYIITKDQIAYVVESLEQIFKEF"
     gene            15472..16614
                     /locus_tag="RTF91_000866"
     CDS             15472..16614
                     /locus_tag="RTF91_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HDZ4943765.1"
                     /translation="MKLEKILQDLEQNHNLRTLTPLKHENKFVYKQNQKLLNLAGNDY
                     LYLASSKELKTEFLSTLKEQDLFFSSSSSRSLSGNFEIYKELESFLKAKFKDKEILHF
                     NSGYHLNISCIAALSSISNTLFLADKFIHASMIDGLRLGGADFFRFHHKDMNHLENLI
                     QKNYDKYENIIILSEALFSMDGDFSDFKVLCELKKRYDKIKLYIDEAHSVGCFDDEGL
                     GLIKKLALENEVDFLVFTFGKAITSMGACMICEEKYKKFFINKARAFIYSTALPPINV
                     AWTQFIFKKMPDFKKKRKKLQTIAKFFKSKLIEKNHQILGDAYIVCLLLGENKKALEV
                     AYKLEKAGVFAPAIKEPTVPKNTARIRFSLHAGLSTKELERIIELL"
     gene            16611..17222
                     /locus_tag="RTF91_000867"
     CDS             16611..17222
                     /locus_tag="RTF91_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDZ4943766.1"
                     /translation="MKYEILCKNPNSKELIVVFGGFASHPSHFLHLKSDKNVILFYDY
                     ENFDLNFDFKAFDELVLIAFSMGVCVANKLLKNINFKQKISINGTNLGIDKQKGIHPT
                     IFKKTMKNFKLENFKEALFKERKNLAKDFIFKDEKALQIELERLFNFALIKQEENLLW
                     DKVYSSKEDEIFAQNALKNSFKNLIFLDEPHFAFFYFKTWDEL"
     gene            17219..17905
                     /locus_tag="RTF91_000868"
     CDS             17219..17905
                     /locus_tag="RTF91_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDZ4943767.1"
                     /translation="MNFLKAKDYKKHAKVQNFMALRLCLELKNLKQRYFKRVFEFGCA
                     RGEFTQELEKIIAFDEYVKNDILDYGVDNKMQIFDMNELAKHDLSKEKFDLIVSNATL
                     QWLDLKRILPTLANMLDKRGVLLLSSFAEQNLKEIKQSTGFSLEYFDIYTLERIFKSY
                     FNNVKITQELIKLDFDNAFEVFRHLKLSGVNSLGFYPLNKRFLKDFEEKFQNKLTYHP
                     VFILCKNDIK"
     gene            17956..18705
                     /gene="modA"
                     /locus_tag="RTF91_000869"
     CDS             17956..18705
                     /gene="modA"
                     /locus_tag="RTF91_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDZ4943768.1"
                     /translation="MKKFIVFFGILLFGLNLNAQNLSIFVASSASKAMNEVKDEFLKI
                     HPNNKIELVFGASGKYYELLKQGREFDLFFSADTKYAQAIYEDENALIKPKVYVLGVL
                     ALYSLDENLLEGGIENLKEKADKITHLSIANPKVAPYGVAAKEVLENLGLNELFKDKI
                     VLGENISVPVLHVDSKNANLAIVAYSLVSPISHPKGKTSIIDPKYFNPLEQSYVITKY
                     AKDKKLAFEFSDFINSSKAKEIFKKYGFNTP"
     gene            18702..19103
                     /locus_tag="RTF91_000870"
     CDS             18702..19103
                     /locus_tag="RTF91_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-pterin-binding protein"
                     /protein_id="HDZ4943769.1"
                     /translation="MNLIKGQICELLNQEDIVIVKIVSKEVVFSVLMLELKSLENLKI
                     GANVELLFKEHELCFSAAKSLLSVENSFLAKITRIKKGALLYHVFFNFKGSELSSIIT
                     KEKALDLEICENQEWLCFVKANDIVLRNNHA"
     gene            19096..19770
                     /gene="modB"
                     /locus_tag="RTF91_000871"
     CDS             19096..19770
                     /gene="modB"
                     /locus_tag="RTF91_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDZ4943770.1"
                     /translation="MLDSTFLQTLYLTFKLAFITTFILFFIGVFSAYLLSFVRFPFKI
                     ILQSLISLPLVLPPSVLGFYLLVSFSTNSSLGQFLKEYFNLSLVFSFEGLVFASLIFS
                     LPFMVNPLQSAFSSINPNLLDASYSLGKSKIYTLFRVILPNSKAGIFSACAMSFAHTV
                     GEFGVVMMIGGHKQGETLVASIAIYDELEVLNYSLAHQYAFILFVFSFLVLFSLYFVN
                     KKMSFQ"
     gene            19767..20639
                     /locus_tag="RTF91_000872"
     CDS             19767..20639
                     /locus_tag="RTF91_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HDZ4943771.1"
                     /translation="MIKIDINHPINTAKGTLDLNFKKDIELGKITALFGESGAGKTTL
                     LKIIAGLIKPKFGRIEVDNELWFDSLKGFDLALQKRKIGFVFQDYTLFPNMNVKENIA
                     YAASSKKKVQELLALMGLENLAKIYPKNLSGGQAQRVALARALAREPKILLLDEPLSA
                     LDFKMRANLQDELVRILHHFRISTLLVSHDLAEIYKLSHRVLELKNGKIIKDFPKNEF
                     FTHSNISAKLRLSGILLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKDYQDIRIGDT
                     LILSVKAFNPLILK"
     gene            complement(20822..21495)
                     /locus_tag="RTF91_000873"
                     /pseudo
     CDS             complement(20822..21495)
                     /locus_tag="RTF91_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872405.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="class D beta-lactamase"
BASE COUNT         7339 a         3558 c         2836 g         7762 t
ORIGIN      
        1 atttaaatca tggcgtaatt ctttttgaat tttaaaatct ttaggaactt taaattcact
       61 agcattatct aatgttggaa aaaatacttt taaaatgcaa attctggatt cttcataaat
      121 atcaatataa ctttttaaag aacaaaattt aaattcaaaa cgttcttttt taatgctctt
      181 tcctataatc ttttttcgag ctttttcaaa ttttttttta gaaatcttct cttcttgatt
      241 ttgttctaaa attaaattat taaatttcgt aattttataa aattcattgc aaaaactttg
      301 aaatttaacg ctatagtttg gagttatttg agtatagaaa gtttcaaatt cataattttt
      361 aaaaggtata ttatcatttc tcaaattctc taaaagagta caatcagaaa gtaaaaagtt
      421 tttttgaatt tcataaacca ttaaaataac ccttaaaata tatgggttat tttaacctta
      481 ttttgcttaa tgacactttt tacaactatc aacataagca caaacagata aatgattaat
      541 taaattgcct atcttttttt ctaaatgctc ttgatattca taaaacttgg cttctttaaa
      601 acttaaatcc tctatattac cgcatttagc acaaatcaca tgaatatgtt cttcttcata
      661 aatatcatag caagtttttt gatttaaaac attaatttca acaaccaagc cttgttcttg
      721 taaagtatta agatttttat aaaccgttgc taaagagatt gaagggtatt cttttttaat
      781 ttctgcatac aattcgtcaa tattaggatg ttcatgtctt tttaaaattt ttaaaacaca
      841 taatctttgc ggggtagctt ttaactcgtg ttttttaagc atttgtagta attccattta
      901 tttattcctt gcttttttaa gtgaaaatga taataaaatt tttattaaaa gaagtttata
      961 tcaaataata ttttttatta tttgatataa aaatttaaaa cttttgtcaa taaactattg
     1021 acatcttttt gtaagttttt ttccacttca cttgttttgc catgttcgat aaatttatct
     1081 tcatactcaa agctaacaac ttttacatgc aaatcatatc tttgtaaaaa attattaatc
     1141 aaagtctcta tgccaccaat tttaacattt tcgctaaaaa taaaccaaat tttacttttt
     1201 ttagcaagct cacataaaag ctcctcatcc aaaggtttag caaaaattaa atcgatcaaa
     1261 ttagcattat tacccatttc ttgtaaggct cttaagactt gccacgcttt tgctacacct
     1321 tgcccataac ctaaaaaagc aatttcgcta ttatttttta tgagccattg cgccttacca
     1381 agctttattt cacaaggatc aaattcttta tctaaaataa aactccctct aggatagcga
     1441 aaagcaatag gtccttgatg caaataagca tactccatta tattttgcat catttgctca
     1501 tctcttggag ctaaaagagt gaaatttggc aaaggagcta aaaaactaac atcaaaaaca
     1561 ccttgatgcg tctctccgtc ttcacctact attcctgctc tatccatagc aaaaactaca
     1621 tttaaattca taatcgcaca atcatggatc acctgatcat aggcacgttg taaaaaagta
     1681 ctgtaaatcg caataaaagg tttaaatcct tcttttgcca tagctgccat agaagttact
     1741 gcatgttgtt ctgcaatagc tacatcccaa aaacgatttg gatatttttc tataagctta
     1801 tcaagccccg ttccacttgg catagccgct gtaactccaa caatattttc atattttgaa
     1861 gctaaatcaa gcaaattctt agaaaaaatt tcagtggctg attttttagt gttgcttttt
     1921 ttaatactct ctccactatg tatatcaaag gctcccactc catgccattt agcatgcttt
     1981 ccttcggcca aagcataacc cttacctttt atggtttgag catgtatcat gcaaggcttt
     2041 tgcatagctt ttgcttgtct taatacagaa ataatttcac ctaagttatg tccatcaata
     2101 ggcccaatat attcaagccc taattcttca aataaaagtc caggagtaat aagtttaaaa
     2161 ctttcttcaa aacgtctagc catataagtg gcactatcag gcaatatatc taacatttta
     2221 gctatacgtt ttttaaaact ttgataaaac tgcgttgcca tagcttgaga aagatatttt
     2281 gaaatcgctc cgattggttt tgaaatgctc atttcattgt catttagaag tatcacgcaa
     2341 ggaaatttag aatcacctaa ttcattcaaa gcctcataag ccatacccgc acttaaagcc
     2401 ccatctccaa tcaaagctat aggaatgcgt ttttctccct ttaaagcaat ggctttacaa
     2461 gcacctaccg ccaaagaaat agaagtgctt gaatgtcccg ctacaaagta atccccttca
     2521 ctaggttttg tatagccact taaaccatta atctgtctta aagtatcaaa tatttcaccc
     2581 tttccactta aaagcttatg tgtataagat tgatgggata catcaaaaat aaaaggatct
     2641 ttttttgcat caaaaactaa atgcattcct atactaagtt ctacagcacc caaatttgaa
     2701 cttaaatgtc caccattttt gctaactact tgtataattt tttcacgtat agatgctgct
     2761 aaattttcta attcttttaa acttagtttt tctaactctt cttgactatg ggcaaatttt
     2821 ttactcatta ttcaccattt ttttaatttt agtcaaacga gaattaagat tagattctat
     2881 attgcctgca tcacttataa taacaacact tcctttgcta attgcatcat caagacttac
     2941 tttaatatga gcattttgac caaattgctc ctttaaatac tcataatctt ctgtattaac
     3001 tttaagttca attgcactag cacctttaag ctcaccaatt aaatctttgg ccaaagcata
     3061 agctatttta cttgaattta gctcaagttc ttttaagatc acttctttgg caatatctat
     3121 agcagtatct gccaattctt tctcattttt ttctatgaaa ttttcaagat tttcacaagc
     3181 attatcgagt ttagctatac tttttaagta cttatcctta aaatcactca attccttttg
     3241 aaattcctct tttgctttat cataaccctc tttaataaat ttttctttag cattttcaag
     3301 ttccgaattt aagcggttat taaattcatt ctcttgactt tctatttgca tttgaagttt
     3361 gataatattg cttgacattt catctgtttt tttaagtaaa tcttcaacaa aacttgattg
     3421 aaatgctgga gcttgagctt ctgggctaac ttgagtagag acaagggttt gattatcttc
     3481 gactggcttc tcatcattta aaggcgtatt aacattttct tcatctaaag cttgagtatg
     3541 ctttttttct cctgcatgat tatcaaattc tgaaataact ttaaaacgat atccttcaac
     3601 aacatgttgt tctgaagttc cacctgaaat aacattacta cgattaacca tttctcacct
     3661 actctatcat ttcatccgca tcacctgttt gcacaagtcc ttgttctgca agtttttgca
     3721 ctacttcaac aacttttctt tgtgcatctt caacatcttt aacacgcaca gcgcctaaaa
     3781 aacccatttc ttcaagaaaa gcttcacttg cacgcgtaga catattagct aaaaattttt
     3841 gctttaattc ttcacttgca ccttttaaac ctatcattaa atcacgctta tcagctactt
     3901 ttaaaatctc ccttatagct tggacgctaa gtttttgtat atcatcaaaa gtaaacatca
     3961 attctttaat tgtttcagcc aaacgttcat cactttgctc aatataagtg atagttgatt
     4021 tacttgcttt ttgccctaaa cgattaagca cttcggccac agcccttgga ccacccactt
     4081 caactttata agaagtaaga ctttcaagct tgctttcaag tactgcagaa acccttttaa
     4141 taatatttgg agaaatatca ccaagatttg ccattctaat tacaacctca gctcttaact
     4201 catcactaaa atactccaaa gtttctgccg catgaataga atccatatgt gctaaaataa
     4261 gagcaatggt ttgtgggtgc tctttggtaa taaaatctgc aagttgttgt ggtttaattt
     4321 gcgccaaata ggcaaaattt tggttatttt ccaaactctt agtgagtttt tcaagaattt
     4381 tatttgcaat ctctggccca aaagtacgga aaagtatttc tttggcatat tccaaaccgc
     4441 cacttttaat atactgattt gattgaagta aggtataaaa ttcttctaaa actgcagtag
     4501 ctacagatct atcaacattt ttagccatgg caatatagcg tgaaatttct gtaattacat
     4561 caatttccat atgcgaaaac acagaagttg ttgcatcttc accaagttgt ataagaaata
     4621 tcgctacctt ttcaggcatc gacaaatcat cataaaccat tttttgttct tcgcttagct
     4681 ttatcatcac atatcctttt cgccaaattc actatcattt tggattaagt tttgtaaaag
     4741 tgcagcaatt tcctcacctt tatcacttac tagaccgcgc aatttttcaa gtaaaacctc
     4801 atactggata gaatcttcat tgaaattatc cccaaaacca agttgttctt caactttttt
     4861 cctagctgca ttaaatttct ctaaagcatc ttcagcatca tctaaaacag cacttggacc
     4921 ttgttgcatt tcctcttgtg ctgcaacatc ttcgagcatt ttttgagtaa atggagcaat
     4981 aacttttttg taaaaaataa aaagtaaaat cgctgcaata aaatatttaa ccggtggaat
     5041 aaatggttca acaaaacgat tataaaaagt tttaacttta ctttcgactc taattgactc
     5101 acgatgaaat ggtaaatttt gcactacaac actatcacct cttgtagcac taaaattaat
     5161 agtatttttc actatacttt caacacttgc aagctcttct ttagtcaatg gaacatactc
     5221 actttttaca tctccatttt catcaaccac atcttgatat tttccatcta tagtaacagc
     5281 tgctgaagta cgcaacactg ttgcaaattg ttttttaata tttgtaatag ttttagaaag
     5341 ttcattgttt gtggtaactt gatttttttt ataagtatca atttgaccct tattgtcaag
     5401 tccttcaaca ggacctatat tagaaacagc acctggaaca ccttgaattt ctggatcttt
     5461 tctgcctgtt ttttcctcgt ttaaagtttg ctcactgcgc actataggat ttggatcata
     5521 aatttcactt tgagattctt gcttggaaaa atcaaaatct atatttacac ttactttcac
     5581 tttatccatg ccacctgcaa aaggagccaa attttctata atcttatctt ctaaagcttt
     5641 ttcttgatca cttttaaatt taatttgtgc acgaactaaa tcatcttcat acgcttcttg
     5701 ttcatctaaa ggcacgccac tttgatcact aattttaaca ttttctttag taagttttgg
     5761 aacagcagct gaaacaatat tttttatacc atcaatttgc tttctagtaa gcttcaaacc
     5821 ttcacgaaca tttacaacaa ctgaagctgt aggtggaatt tgtctttcag taaaaacact
     5881 atccttagga aaagctatat gcacaacagc gttgcgtata ggttctaaag tttcaatagt
     5941 tcttgcaagt tcgccttcta tagccctttg gtattttacc ttttgctctt cacttgtagc
     6001 tccaaaagct tgagtatcaa aagcttcaaa acctacacga ctatctttta taagtccctc
     6061 acttgcaata aacattcttt gacgataaac ttgatcttgt ggaactaaaa ttttattttc
     6121 gctttccaat ttataaggaa tattattttg ttcaagttta gctacaatag cagcagaaga
     6181 acttggactt acattttcaa ctaaaactgc atatccatta tttgcattac caccacttcc
     6241 acgaaataaa gccaaaaaaa ccaaaaaccc gactactacc acaatagatg cagcaatcac
     6301 tatacgctgt ttacgagtta aattttgata aagttgacca atttgatgga acatattttt
     6361 aaaatccatt aattctcatc ccttagttta gcgaatttca catattttac tttagattta
     6421 tatcaattta aaatcttatc aaattctgtg aaaaatcttt cattttcata agatgttcct
     6481 atagtaatgc gtatagcatt taaaccatag ctttttaaat ttcttattat tatacccttt
     6541 ttaagcaatt tttcagacaa atctgtacta tttttttcat aaaaaaaata agtaatgaaa
     6601 tttgtatagc tatcgataat tttaatatta tattttttag caaatttttt ataaagctcc
     6661 atttgagaaa aattattctc taaagttttt ttagtaaatt catcatcatc cattgctgca
     6721 actgctgctt ttaaagcaag attgctcaca ttaaaaggag cacgaagctt ataaaacgca
     6781 ctaataatac taacattagc tataccataa ccaatgcgta agccccctag tccataaagc
     6841 ttagaaaaag ttcccaaata aagtacattt tcaaattttt taatcaactc ataaggttct
     6901 aagtgttttt tgctatcctt aaaacttgca aattcattat aagccgcatc aatcacaatt
     6961 aaacaatcct tatctacacc tttaataaac ccaataactt cacttgcatc taaacactca
     7021 cctaaaggat tgtttggcaa gcataagaaa ataattttaa tctcatcttt atgtgcttca
     7081 taaagctttt taaattcatt taaatcatga gtaatacttt gagttttata acattttgca
     7141 ccgcattgtt tggcataaat ttcatacata gcaaaagtaa ctccagcttg caaaaaagca
     7201 tttttagaat ttagcttaga atgtatagca aattcaatca cctgatcgct acctgcacct
     7261 atgatgatat tttcattttg aactttgtat ttttgagcca atttactttt aagctctatc
     7321 atactatcat caggataaag atgggcttta tttgcatttt gctttaaact ctctatagcc
     7381 tttggtggag tgccaaaagg attttcattg cttgccaatt ttatcacttc tttaacatca
     7441 tattctttag caataacttc tatatcttta cctggttcat aattgcttaa atgatttaaa
     7501 aattcattaa atttcatctt tttctcctga taaataagat ccaagccaaa caatctcttg
     7561 tatatccttt aaagcttttt ttacattttc atcatcaata tgcccttcaa aatctatata
     7621 aaaactatgt aaaaattctt ttgattttat aggacgagat tcaagtttag taagattaat
     7681 attttctttt ttaaactgtt ctaataaaaa gctaagcccg ccaggtttat gcgctgtgtg
     7741 tgctaaaata gaagttttac aatttggcat tttaggattt ttaatatcac ttaaaatcaa
     7801 aaatcttgtt ttattagctg cattatcttc tattttatca aaaagtacag gcacattata
     7861 aagctttgct gctattttag aacaaatcgc ggctgcatat ttatcctgtg aagctagata
     7921 agccgcatta gccgtagatt ttgaaggcac aaattctata gcgctaagtt catgactttc
     7981 taaaaattta cggcattgat tataaccttg cgggtgtgaa taaatgcgtt ttatctcttt
     8041 taaattttca ttaattccta caaaagaatg atgaatatcc atataaattt caccaaaaat
     8101 tttaagctca ttatatttac ctaaacaatc taaagtgatt cccaccgcac cttcagtgtt
     8161 gttttctata ggcacaacac catattttgc ttctttatta cttagctctt taaaaacatc
     8221 ttcgatatta gccaaagcta tataacgact catcgcacca aaacgacttc ttgctgcttg
     8281 atgagtataa gttccctcag gtcctaaata agctatagct tgaggcattt ctaaatttct
     8341 tgaaaccgca aaaatttctt gataaattgc ttctatagcg ttttgatcta aaagtcctaa
     8401 atttgcattt tttaaacgat tgataatcgc tctttcacgc tcgggacgat aaatagcccc
     8461 tccactgctt tgtttaagct cacctatgct tttaacataa gtcattcttt catttaaaag
     8521 ctctaaaatt ttatcatcta ccgtatcgat tttatttcta aattcttcta aatttgacat
     8581 tttagctcct ttaaaaactc aaaaacacta ggataaattc catcaagcaa atcagtatca
     8641 agcctttttg tatcgcttat tttaccactt aaaacaagca aggttttcat accaagctct
     8701 tttgccttaa gcaaatctcc tttaaaatca tcactgataa tcctaatatc ttcaaaatca
     8761 attcttgaat tttgccttct tatcaaattt aaagcttctt tgtaaaaagc aatgctaggc
     8821 ttacccacaa cctcatactc aaaatcaata gcatttttaa gcatgaccat aatactacct
     8881 acaccaggat aaggtctgcc atctttttta taaacgctag cttcatgcat agctataaat
     8941 ctaacttctc ttctagcaaa ttctatcata ctcgcaaaat ctttaaattt aaaatcatca
     9001 taactagcca caagcacagc actaggattt acaaaatcga gctcaaaacc aagattttca
     9061 aggcttttta caaactcatc tgcaccaaaa gctgcaactt tacaaggttg taaaatatgt
     9121 tttaaaacac taaaaggatc aatataagca ttctctttta tagccaaacc tttttgctgt
     9181 agtttttcta aaaaatcaag tttttttgta ttgttagtaa tgatgacata agaaagattt
     9241 tttatattta aaaaatcaat caattcttta gcaccatgga ttaaagattt gtcataatca
     9301 gaaatcaaag tcccttgaac atctaaaaaa aacattttaa gcctttaaaa atttctcttc
     9361 taaagcgatt tgatcttgaa aattttctct ttggcggatc aatcttactt gtccttcttc
     9421 aagagctaat tcgcaaactt tattacgagt attgtaatta ctactcatac taaaaccata
     9481 agctccagta tttttcacaa ccataatatc accactttgc gtgctaggta aagatcttgc
     9541 cttggcaaaa aaatctccac tttcacaaat tccacctaca acatcacaca aattttcttc
     9601 actttgatta taaggtaaaa ctatttcatg ataagcctca tacaaacttg gacgtataag
     9661 atcattcatc gctccgtcta ctacaataaa acgcttggtt ttgttttgtt tttcataaag
     9721 cactgaacaa acaaattctc cacttttggc aactaaatat cttccaggtt ccattcctat
     9781 agttaaatca agcccatgaa gttgtgctaa tataccttgt gcataattat aaagatcagg
     9841 ctcacattca tctttttcat aagcaacacc aagaccacca cctatatcaa aaaatttaag
     9901 atctatttgc aaagctttta attctcttac aagttttgca acaatacctg ctgcctcatg
     9961 aataggagaa atatctaaaa gttgtgaacc tatgtgaaaa tgcactccga caggctctaa
    10021 aaaagatgaa ttttttgcat aaagatacat ttttcttgct atatcaattt caacgccaaa
    10081 tttattttca ttaagtcctg tagaaatata aggatgtgtt tttgcatcaa catttggatt
    10141 gacccgaata ctgattcttg cttttaaacg aagttcttta gccacgcttt ctaaaagcat
    10201 catttcagct tcactttcaa ggttgatata taaaatatca tactctaaag caagttttaa
    10261 ctcttcttta gtttttccta ctccactaaa aataatctta taggcttttg cccccgcttt
    10321 taagacacgc tttacctcac ctatactcac acaatcaaat ccgctatcta aattagcaag
    10381 catttgcaaa agacttaaat ttgaattggc ttttacggca taaaaaattt gagattttct
    10441 ggctttaaaa gcatctttaa gatttaaaaa acgctctttt atagagtcaa aattgtaaat
    10501 ataaaaaggg gtgttaaatt cttgccttaa ttgcttataa tccatcttta acctttaatt
    10561 ttgataattt tactacacaa agcttaattt atcgatgctt ataatacata taagcactta
    10621 aacaacctaa aattataata ggtattacaa taccaatctc acttgcaatt acactattct
    10681 cacttaacct agtaagcaaa aacaacactc cccaaatcat caaagtcact acaaaagcta
    10741 taaaagttac aaaagcaaga ttaaaaaatc ttgctattat aggaaaaaaa taatacataa
    10801 taagcatcaa aaatggggca aaaaaaggag taaaaataaa tttataaaga ttaattctaa
    10861 gagcatctgt attgacattt tgggctctaa aaagctcaaa actttcaagt gcgtcagata
    10921 tagaataatc actattgcta gccactcctt ctataatctt tggcttaaaa ccatcaagcg
    10981 atttaagctg ggaaaaatct tttatcttta aaccatcatt agcaagttca tagtttttgg
    11041 gtaataatgt aatattacca tctcgcaaaa tccaactttc accttcaaaa taagcatttt
    11101 tagcgcttat aaaagaactt aaatttgaat cattaatatt aaaaattttt atattttgag
    11161 cgctattttg cccattgttt atctttgaaa tataaacaaa attattatta aatttcaaaa
    11221 atacttcccc actttgagtc ataatggtgc cattttttaa aatatttctc ttataatcat
    11281 ttgcataagc aaaagaagta aaatttaatc ctatataaat acaacaaaaa aacaaagccc
    11341 ataaaaaggg aaacaaaaca acataatttt tactcagtcc taacgcataa agacttacaa
    11401 actcatttgc tctaatcata gaaattaaag aaactaccaa agcaaaaatc aaagaaatag
    11461 gtaatacata aggcactgct gaaaaacaca aaaacataat ataaagcaaa ttaagatttg
    11521 cagcttttgg caaatcttta aaatttaaaa gcaagtcaat accacaataa aaaccaagca
    11581 aagaaaaaaa aataataaaa aaattcttta aataaacccc ggaaataaaa cgaaaaaata
    11641 tccacatctt aagcctttaa gctgtatttg gatgatatag cagacaaatc atcattccta
    11701 ataagctcaa gcaaagcttc tttagcattt tctaaaacct tgctcaagat tatttcttct
    11761 tcggatttaa atttacccaa aacatgcgaa atcacatttt ctcccttacc cactcctata
    11821 cgcactcttt cataatcact cccacataaa ctatctatgc ttttaagtcc attatgtcca
    11881 ccacttgaac cgcctttttt aaaacgtaaa gcccctaagt ttatatcaat atcatcatgg
    11941 attactataa ttctttcaca tttataaaaa tcatttactg cttttacact aagccctgaa
    12001 ttattcatat aagtactagg tttaagaaga agtaaggaag agcttatctt aaaaagctct
    12061 cctttaaatt tagagtttgt aagatttata gaattgtttt cttttaaaag taagtcaatc
    12121 agcataaaac cgacattatg gcgggtattt tcatactctg cacctatatt gccaagccct
    12181 acgactaaaa tcatctagct ttttctacac ctacaaccgc tactctatca gcatcaatca
    12241 tagttacacc tttaggaact acaatatcac gaacaagcaa agcatcacct acatcaagtt
    12301 tacttacatc aagttcaaag aaatttggca aattttcagc tgtacatttt acttttaatc
    12361 ttctttttga ttggattaaa acacctttat ttttaagacc tatagctgtt cctgtgattt
    12421 taaccggaac catgtattta gaaatcacat ctttttgtgc aacttttaaa tccacatgtt
    12481 taagttctgc agttacagga tctttttgat aatccacaac cacaacactt aaagtcttag
    12541 aacctacttt tacatcgaaa attaaagtag tttttttacg aacttcttta atgaattcat
    12601 ttaccttaaa ggcagcattg atgttttcta atccttttcc atagatgttt gcgattagat
    12661 aaccatctct ttttaaagct ttagcagctt ttctaccgat actctctcta acgatacctt
    12721 ctaacatctt ttgtcctttc ttaaaaaatg agctttaatt atatctaatt ttggcttatg
    12781 gaaaagtaaa tttaagcttc tttaatttct ttaaagctat aatttgttat gcaaacattt
    12841 atgttaaatt taaggcttac gcgtgaatga aaaattcaat atcaatatag cttggttttt
    12901 gataatctta ggtgggatta tagaatgttt ttgggtgagc gggcttaagt attctacgga
    12961 aatttggcat tatattttaa cggcaattgg agtttgtatt tcttttactt gttttttaaa
    13021 agcttgtgaa aaacttgaag taagtattac ttatagtgtt tttgtaggta ttggtactat
    13081 tggagtagtt ttaaatgaaa tgtttatttt caatgaagct gtttctataa ctaagcttgt
    13141 acttatagca attttacttt taagtatcat agctcttaaa tgggtaagca aggaagctaa
    13201 gtgatggaat ggttttatct gtttttagct accgcttgtg aaatttttgg cgtggtgatt
    13261 atgaaagaac ttgtaaatac caaaaacaag ctttatcttt tagctttgat catttgcttt
    13321 ggattttctt ttactttttt aagtttaagt atgcaaaata ttgctatgag tgtggcttat
    13381 gctatatgga caggtgctgg aactgcgggt ggagtgatga taggaatact tttttataaa
    13441 gaaagcaaaa gttttttaaa actttcttta attgctatga ttatttcttg tactgtaggt
    13501 ttgaagtttc tttcttaaag gttttttaat gcaaattttt gtaagcggag tgcatactga
    13561 tgtaggtaaa acacatttta gtgcggcttt ttgtgcgaat tttaattatg attactttaa
    13621 gcttgttcaa gcaggaacgc caacagacag cgaatttata gcaaaattta gtccaaaaac
    13681 aaagattttt aaagagggtg tttttttaca aaccccagct tctcctcatc ttggaaaaat
    13741 caaagaaaag cttgattata aagccttaga gcttaatctg ccaaagagtg aaaatctact
    13801 cattgagctt gcgggtgggc ttttttcccc tattgatgaa aaatacacta tgattgattt
    13861 tatggcttta cataaaaaag caagcatttt agtggcaaaa tattatcttg gaagtatcaa
    13921 tcatattttg cttagcattg aagctttaaa gcaaagaaat atagagcttt tagcccttgt
    13981 aatgatgggt aaaaaagaca ttttacaaga taattttata aaaaattaca cacaaatttc
    14041 tataataaat cttgattttt ttgacaaaaa caatatttta aatcaaaatt ttaaagaaca
    14101 aatacaagaa atcttataaa ctaaaattcc ttaaaaatct gctctaaact ctccactaca
    14161 taagcaattt gatcttttgt gatgatgtaa gggggcataa aatatatggt atttcctaaa
    14221 ggccttaaaa gcaagccttt ttctaaggct ctttgaaata caaaaagtcc tacacgttcg
    14281 tatttagtgc ttaaaatatc aaaagcacta atcattccac aagttctaaa atttcctaaa
    14341 aaatcaaatt ttttaagttt tgaaaattct tgctggataa agatgcttaa aatttgattt
    14401 ttttctaaaa tattttcatt ttcaaagata tctaaaaccg cattagctgc cgcacaagct
    14461 aaggcatttc ctgtgtaact atgagagtgc aaaaaggctt tttgttcgct ataaggtgcg
    14521 taaaaggcat tataaatttc attctttgta agcactacag aaagaggcat aaatcctcct
    14581 gtaatacctt ttgaaagaca gataaaatca ggactttgct tgcattgatg caaggcaaat
    14641 aaagttcctg tgcgtccaaa acctaccgca atttcatcaa agatcacttg cacattaaat
    14701 tcatgacaaa gtttgatcgc ttcatcgata aaatgggctt catacatgtg catatttcct
    14761 gcacattgca ctaggggttc aagtataaaa acacaaattt cactagagta tttttctaaa
    14821 atatctttta aaatttcaag ctctttggta taatctttat tttgtggcac aggcgtgctt
    14881 aaacactcta aaagcaaagc tttataagta tctttataaa gtgcgacatc acctacactt
    14941 aaagctccta aggtttcacc atgataagaa ttgcttaggg ataaaaattt attttttttc
    15001 aaacctttat ttaaatgata gtgaaaactc attttaagtg ctacttcaat ggcgcttgag
    15061 ccattatctg cataaaaaca tttgttaaat tcccgcccca ctttttcaca aagtctcgca
    15121 gaaagtttga taataggttc gtgagaaaaa cctgctaaaa tcacatgctc tagatcatca
    15181 acttgttttt taatggcatt tgcgattttt tcattacaat gtccaaaaag attgacccac
    15241 caagaactca cacaatccat ataagcctta tcatcaaaat cataaagcca cacgcctttt
    15301 gcttttttta tgggaattaa aggcagattt tcatgatctt tcatttgagt gcaaggatgc
    15361 caaatgtgtt taagatcaag attttttaag atttcacttt gcattataac ttctttttta
    15421 aaaatatttt ggcaaaataa tactttaaat ttttaaattc ataggaaaaa aatgaagctt
    15481 gaaaaaattt tgcaagattt agagcaaaat cacaatctaa gaactctaac acccttaaaa
    15541 catgaaaata aatttgtcta taagcaaaat caaaagcttt taaatttagc aggaaatgac
    15601 tatctttatt tagcttcttc taaagaatta aaaactgagt tcttaagtac cttaaaagag
    15661 caagatttgt ttttttcaag ttcgagttca agaagtttga gtggaaattt tgaaatttat
    15721 aaagaattag aaagcttttt aaaggctaaa tttaaagata aagaaatttt gcattttaat
    15781 agtggctatc acttaaatat ctcttgtata gctgcccttt ctagcatttc taacacgctt
    15841 tttttagctg ataagttcat ccatgcaagt atgattgatg gtttaaggct aggtggggct
    15901 gatttttttc gttttcatca taaagatatg aatcatctag aaaacttaat ccaaaaaaac
    15961 tatgataaat atgaaaacat catcatttta agtgaagcct tatttagtat ggatggagat
    16021 tttagtgatt ttaaggtttt gtgtgaactt aaaaagcgtt atgataaaat caaactttat
    16081 attgatgaag cgcatagcgt gggttgtttt gatgatgagg gtttggggct tattaaaaaa
    16141 ctagccttag aaaatgaagt ggatttttta gtttttacct ttggaaaagc tattacttcc
    16201 atgggtgctt gtatgatatg tgaagaaaag tataaaaaat ttttcatcaa caaagctaga
    16261 gcttttattt attctacagc tttaccacct attaatgtag cttggaccca atttattttt
    16321 aaaaaaatgc ctgattttaa gaaaaaaaga aaaaaattac aaaccatagc caaatttttc
    16381 aaaagcaaac tcatagaaaa aaatcatcaa attttgggcg atgcttatat cgtctgcttg
    16441 cttttaggtg aaaataaaaa agccttagaa gtagcatata aacttgaaaa agctggagtt
    16501 tttgcccctg caattaaaga acctacggtg ccaaaaaata cagccagaat ccgtttttct
    16561 ctgcatgcag gacttagcac aaaagaactt gaaaggataa tagaactttt atgaaatatg
    16621 aaattttatg caaaaatcct aattcaaaag aacttatagt ggtatttggg ggatttgctt
    16681 ctcatcctag tcattttttg catcttaaaa gtgataaaaa tgtgatttta ttttatgatt
    16741 atgaaaattt tgatttgaat tttgacttta aggcttttga tgagcttgtt ttgattgctt
    16801 tctctatggg agtttgcgta gcaaataaac ttttaaaaaa tataaatttt aagcaaaaaa
    16861 tttctataaa tggcacaaat ttaggtatag ataagcaaaa aggtattcat cctacaattt
    16921 ttaaaaaaac catgaaaaat ttcaaattag aaaatttcaa agaagcttta tttaaagagc
    16981 gtaaaaattt agcaaaagat tttattttta aagatgaaaa agctttgcaa atagagcttg
    17041 aaagactttt taattttgct ttgataaaac aagaggaaaa tttgctttgg gataaggttt
    17101 attcaagcaa agaggatgaa atttttgccc aaaatgcttt aaaaaatagt tttaaaaatt
    17161 tgattttttt agatgaacct cattttgctt ttttttattt taaaacttgg gatgagcttt
    17221 gaatttttta aaagcaaaag attataaaaa acacgctaaa gtgcaaaatt tcatggcttt
    17281 aaggttatgt ttagagctta aaaatttaaa acaaaggtat tttaaaaggg tatttgaatt
    17341 tggttgtgca agaggggaat ttacccaaga acttgaaaaa atcattgcct ttgatgagta
    17401 tgttaaaaat gatattttag actatggcgt ggataataag atgcaaattt ttgacatgaa
    17461 tgaacttgca aagcatgatt taagcaaaga aaaatttgat cttattgttt cgaatgcaac
    17521 tttacaatgg cttgatttaa aacgcatttt acccacactg gcaaatatgc tagataaaag
    17581 aggggtttta ttgctttcta gttttgcaga gcaaaattta aaagagatta aacaaagtac
    17641 aggtttttct ttagagtatt ttgatattta tactttagag cgaattttta aatcatattt
    17701 taataatgtg aaaatcactc aagagcttat aaaattagac tttgataatg cttttgaagt
    17761 ttttagacat ttaaaattaa gtggggtaaa ttctttgggt ttttatcctt taaataagag
    17821 gtttttaaaa gattttgaag aaaaatttca aaacaagctg acttatcatc ccgtatttat
    17881 tttatgcaaa aatgatataa aataaatttt ttatgttata attcaaaaat taaattttta
    17941 aacaaggaaa attaaatgaa aaaatttata gtattttttg ggattttgtt gtttggttta
    18001 aatttaaacg cacagaattt aagtattttt gtagcttctt cagcttcaaa agccatgaat
    18061 gaagttaaag atgaattttt aaaaatacat cctaataata aaatagagtt agtttttggt
    18121 gcttctggaa aatattatga acttttaaaa caaggaagag aatttgatct ctttttttca
    18181 gctgatacta aatacgctca ggctatttat gaagatgaaa acgccttaat aaagccaaag
    18241 gtttatgttt taggagtttt agctttatac agtttggatg aaaatttgct tgaaggaggc
    18301 attgaaaatt taaaagaaaa ggcagataaa attacgcatc taagcatagc caatcctaaa
    18361 gtagctcctt atggagtagc agctaaagaa gtacttgaaa atttaggttt aaatgagctt
    18421 tttaaagata aaattgtctt aggtgaaaat atttcagtac ccgttcttca tgtagatagt
    18481 aaaaatgcaa atttggccat agtagcttat tctttagttt ctcctattag ccatcctaaa
    18541 ggtaaaacaa gtatcattga tccaaagtat tttaatcctt tagaacaaag ttatgtcatt
    18601 acaaaatatg ctaaagataa aaaattagct tttgaattta gcgattttat caattcttca
    18661 aaagcaaaag aaatttttaa aaaatatgga tttaacacac catgaacctt ataaaaggac
    18721 aaatttgtga acttttaaat caagaggata tagttattgt taaaatagtt tctaaagaag
    18781 tagtttttag tgttttgatg cttgaattaa aatctttaga aaatttaaaa attggcgcaa
    18841 atgtagaact tctttttaaa gaacacgaac tttgttttag tgcagctaag tctctcttga
    18901 gtgttgaaaa ttctttttta gctaaaatta caagaattaa aaaaggtgca cttttatatc
    18961 atgtattctt taattttaaa ggtagtgaac tttctagtat tatcaccaaa gaaaaagctt
    19021 tagatcttga aatttgtgaa aatcaagaat ggctttgttt tgttaaggca aatgatattg
    19081 tactaaggaa caatcatgct tgattcaact tttttacaaa cactttatct tacttttaag
    19141 cttgctttta tcacgacttt tattcttttt tttattggtg ttttttcggc ttatttatta
    19201 agttttgtgc gctttccttt taaaataatc cttcaaagtc ttatttcctt gcctttggtt
    19261 ttacctccta gtgttttagg attttatttg cttgttagct tttcaactaa tagttctttg
    19321 gggcaatttt taaaagaata ttttaatctt tctttagttt ttagttttga aggtcttgtt
    19381 tttgcttctt taattttttc actacccttt atggtaaatc ctttgcaaag cgccttttca
    19441 tcgattaatc caaatttact tgatgcttct tatagtttag gtaaaagtaa aatttatact
    19501 ctttttagag tgattttacc taattctaaa gcaggaattt ttagcgcttg cgcgatgagc
    19561 tttgctcata ctgtaggcga atttggtgta gtgatgatga taggaggaca caaacaaggt
    19621 gaaactttgg ttgctagtat agctatttat gatgagcttg aggtattaaa ctatagctta
    19681 gcgcatcaat atgcttttat attatttgtt ttttcttttt tggtgctttt tagcctttat
    19741 tttgtcaata aaaaaatgag ttttcaatga taaaaattga tatcaatcat cctataaata
    19801 ccgctaaagg aacactggat ctaaatttta aaaaagatat agaactagga aaaattaccg
    19861 cactttttgg tgaaagtgga gcaggaaaaa ccactctttt aaaaatcata gcaggactta
    19921 taaagcctaa atttgggcgt atagaagtgg ataatgagct ttggtttgac tctttaaaag
    19981 gttttgattt agctttgcaa aaaagaaaaa ttggttttgt ttttcaagat tatacgcttt
    20041 ttcctaatat gaatgtaaaa gaaaatattg cttatgctgc tagttctaaa aagaaggtac
    20101 aagagctttt ggccttaatg gggcttgaaa atttagccaa aatttatcct aagaatttaa
    20161 gtggaggaca agcacaaaga gtggctttag caagagcttt agcaagagaa ccaaaaatct
    20221 tgcttttaga tgaacctttg agtgctttgg attttaaaat gcgtgcaaat ttacaagatg
    20281 aattggttag aattttacat cattttagaa ttagcacttt gttagttagt catgatctag
    20341 ctgaaattta taagttaagt catagagttt tagagcttaa aaatggaaaa atcattaaag
    20401 attttcctaa aaatgaattt tttactcact caaatattag cgcaaaatta cgcttaagtg
    20461 ggattttact agaaattaaa aaaagcgata ttttggtggt tttgaccttg cttttaaatc
    20521 aagatattat caaaatcact cttagcgagg aagaattttt aaaagattat caagatataa
    20581 gaataggcga tactctcata ctttcagtaa aagcttttaa tcctttaatt cttaaataat
    20641 atatgcttca ttatgatttt aaataaaaat aattaagcaa aaatacacta ataattaagt
    20701 aagttatttt gattttaaaa aacaacaaaa ccaaaacaac tgctaaaaat agacataata
    20761 ctctaaaacc tctcgtataa atagtatcta tttttcttta aagctgctat atattattat
    20821 ttcaatctct tatgatattg caactattaa aggctaaata tttttctagc aattcttctc
    20881 ttattttaat gcttttaata tcctttatat caacatttaa agcaaaagat aaaaatttta
    20941 tttttagttt ttataaatcc aacaatccaa gctaaattta taccatcatt aaaacccgtt
    21001 ttagcataat ttttttatat tttattttct ttaaaaaaga atatttttaa cttcttcttg
    21061 actttgcttt aaaaaaggta aagaattttg cgaaagtttg aaaaataaat tagcctaatt
    21121 ttttgctgca atttgtaaag aattatcaag tcaaaaaata tcgattttag aaatttttgc
    21181 atttccataa gaaagcttgt ttaatttttc ttgccaattc tttaaaagca ggtacttaag
    21241 aacgctttat agctgaagtt aaatcagcat cttgtttcta agaggataaa aatactttct
    21301 ttgtatcatt aatcacgccg ctattaagtg caattaaagc attaaaattt taaaagttga
    21361 agcaggagaa aaaggttttt cagctctttt aaaatcatta cttgcataat tttttccatc
    21421 aaagactata aaaactccac ttgtattata tagtctttaa aaaaattttc taatatttta
    21481 tcttgcctaa aggca
//
LOCUS       DAPWAA010000025        20996 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.025, whole genome shotgun sequence.
ACCESSION   DAPWAA010000025 DAPWAA010000000
VERSION     DAPWAA010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20996
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.025"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..303
                     /locus_tag="RTF91_000874"
     CDS             <1..303
                     /locus_tag="RTF91_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase heme-binding subunit YedZ"
                     /protein_id="HDZ4943772.1"
                     /translation="QILRLFDDISHRLLEASGFIAFLIIFLMLLSSFKIFKKLSKIRK
                     LGYLCLVLASYHYFLTPKVPMFWEWSALIIALFYFIFRYITTFKSLKSNNFTFIKT"
     gene            complement(268..1980)
                     /locus_tag="RTF91_000875"
     CDS             complement(268..1980)
                     /locus_tag="RTF91_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ4943773.1"
                     /translation="MKKLKNFLSLKNIEDTQIYKELKCAKNEALILRELCRNYVVSIS
                     SINAFTLLSTIFGNDKYIYLDALEDLKKLIERGFVNQNSNFFKSLENNKTQTLTLVLL
                     QSELSLSEYFLEFLEAKPRLSFEKQEAYADYLEYLKDEFARIQLYERLSFIQKSAYNS
                     EIKNQIKLYEKHIKERLKKSKFYNVLADIFKEYNLEHKEQIIFLALLKEEYALSNESS
                     ISREMNSLLSLISENDLERHKNKKLLQENAPLLNLIEYDEYLNAFGDVSKSFFIIDEV
                     LQRIINFEPKQSKKIKIESVLKDQDIFELIEPSTDINDIIMPKNTKELLENILRQQDK
                     KVLERLHSWGIKSNKNIEAKIIFYGPAGTGKTMSALAMAKSMKKSVLSFDCSKILSKW
                     VGESEQNVRKIFDTYKNIVQTCKQSPILLLNEADQFLSTRVDGSSGSDKMHNQMQNIF
                     LEQIERFSGVIIATTNFLESLDSAFSRRFDYKIEFKKPDFKDRLKIWEKFLPKKALFE
                     KDFDVNILSNYELSGAQILMVVKNTALKVAVSEDGVFKMQDFIESIQKELNSSFDKSK
                     IVGF"
     gene            complement(1980..2804)
                     /locus_tag="RTF91_000876"
     CDS             complement(1980..2804)
                     /locus_tag="RTF91_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943774.1"
                     /translation="MKIFLLMFCFINLALAQVYKGELYFYRLQDKEIFAIVYNNAPMT
                     PLFDRDRNQTSSSFLIIDDINGNLEIPLIKTNDFWQDERKKYKINSSKMLVYDNKNFQ
                     GENLGTTTLELIETQDGIRIKHSLDFIGFNDDFKEFHPIHKGVFSFEQIHQKPIFLQD
                     EKISFEEWYYFYEDGMSRAILELNNFVYDINAHVFVKLNDLYNIENQNFQNLLHEKLK
                     NTCDECFEDLQNLQFNNNFLLNNGKLKICYLPFEGHFLDENICVKFNEDELKEFKK"
     gene            complement(2815..3291)
                     /locus_tag="RTF91_000877"
     CDS             complement(2815..3291)
                     /locus_tag="RTF91_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943775.1"
                     /translation="MKYCLTLCFVFFLCACSVKNQNFSSQSLMVLIASPMIRINDAAF
                     LKKENNALNLEVYKLGQAFFELKIKDKICINAVCYDKKVFNRNFFKNTYYEDILSDIL
                     KANALWQGKNLEKTDCGFEQNLKAKNYEIFYQVCGDKVSFFDKISRTKIILTRIQN"
     gene            complement(3301..3792)
                     /locus_tag="RTF91_000878"
     CDS             complement(3301..3792)
                     /locus_tag="RTF91_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HDZ4943776.1"
                     /translation="MASEHSFDISAALDKQELKNAFEQAKKEFDNRYDLKGVKVELDF
                     NEKDRVFKLSSSSEGKLDVLKDIVISKLIKRGINPNAIKELSRESGAMFRLILKANDA
                     IDSENARKINKAIKDSKLKVNPSIRGEEIRVVAKQIDDLQAVMKLVKELNLELNISFK
                     NLK"
     gene            complement(3782..4717)
                     /locus_tag="RTF91_000879"
     CDS             complement(3782..4717)
                     /locus_tag="RTF91_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HDZ4943777.1"
                     /translation="MKIVCLDAATLGDYDLSIFEKFGSLQIYATTNKEQTIERLKDAN
                     VAITNKVIIDKDIIDACKDLKLILETATGVNNIDVEYAKAKGVIVKNAVGYSTMSVVQ
                     HTFALIFAFLNQVLYYDKWSKESKWCESPIFTDYSRVLNTLSGKKHGIIGLGTIGKEV
                     AKISKIFGAEIYYYSTSGANKNADFIHLELQDLLKTCDIISIHAPLNEKTKNLLTFDE
                     LKLLKDNAILINVGRGGIINENDLAKIIDEKNIRVGLDVLEFEPMIKNHQLLSIKNKE
                     NLIITPHVAWASKESLNALMDMVYNNLKEWMENGK"
     gene            complement(4720..5889)
                     /locus_tag="RTF91_000880"
     CDS             complement(4720..5889)
                     /locus_tag="RTF91_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HDZ4943778.1"
                     /translation="MQLIQVNKLQKDYLENIGFSWHTDEDGSDYISDKLVCVKESEVN
                     AYYEAVNELYDMFIAAAQEVIDNDRFDELGIPFNLVDAIKMSWDNEVHWHLYGRFDLA
                     GGIDGKPIKLIEFNADTPTALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLI
                     TLDESVEGFEEHYQGWKILFSSVAGSKEEEITTKLLAHIANEAGFQTNFSFVDEVEFS
                     EEGIFKEGENYEYWFKLIPWEDIAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKG
                     ILKILWELYPNHPLLLETKDTPLEGKNYVKKPVFGREGANISIIKDGKTLHENVGPYG
                     NNKVIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKE"
     gene            complement(5899..6504)
                     /locus_tag="RTF91_000881"
     CDS             complement(5899..6504)
                     /locus_tag="RTF91_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0323 family lipoprotein"
                     /protein_id="HDZ4943779.1"
                     /translation="MKKIKKIIQIGMIGGLAAVAAGALAGCGNNNENSDVLNQAASAQ
                     GAFVIIEETAPGQYKIKDQYPSDETRVVLKDLNGTERILSKEEMDALIKEEAAKIDNG
                     TSNLTKDNGQVSSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA
                     YQRSVNSFNKAGTTSSASSAKKSGFFGGDSKTTSSSSSFGS"
     gene            complement(6625..6837)
                     /locus_tag="RTF91_000882"
     CDS             complement(6625..6837)
                     /locus_tag="RTF91_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDZ4943780.1"
                     /translation="MPGIKVHPNESFDEAYRKFKKQVDRNLVVTEVRARRFFEPMTEI
                     RKKQKISARKKMLKRLYMLRRYESRL"
     gene            6996..8372
                     /gene="ccoG"
                     /locus_tag="RTF91_000883"
     CDS             6996..8372
                     /gene="ccoG"
                     /locus_tag="RTF91_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HDZ4943781.1"
                     /translation="MQGHITNYTKKRYFVYLIASIIIFTLPFIRINDNHFFLLNFDHS
                     KLNLFFISFSTQEFYLMPFVLIFLFLFIFFITTLGGRIWCAWSCPQTIFRVIYRDIIQ
                     TKFLKIRKNINNKQKEYEREYFKKFTGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQN
                     PSEHLFLLGILFCTSLFFTLDITYLQEKFCTYVCPYARIQSVMFDHDTMQVIYDEKRG
                     GLIYDGHTKLHKKPPEGECIGCEACVSICPTHIDIRKGMQLECINCLECADACSKVQN
                     KFNRPSLINWTSAKAIETHSKVHYLRFRTIAYFIVLLIALLALIIMGSKKESMLLNIN
                     RSSELYNISNVKGELVISNAYTFLFQNTDSKPHEYYFTANLEGINDGIEITRPSKPFT
                     LKAGEQVKKIVVIKATKKLANNDKKDVIFPLHIKAYAKDNEKISVFRKSIFVYPKSTL
                     IKDKNELR"
     gene            8359..8991
                     /locus_tag="RTF91_000884"
     CDS             8359..8991
                     /locus_tag="RTF91_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDZ4943782.1"
                     /translation="MNSDKTPSQKVLTRQEKIKTVALELFLTKGYQETSLSDIIKLSG
                     GSYSNIYDSFKSKEGLFFEILDGICKKHFHLIYSKTQEIENGTLKEILTSFGLAFIEI
                     FNQPEAVAFGKIVYSQVYDKDRHLANWIENNQQNFSYNILMDFFKQQDNSYMKQNAEK
                     LAVLFCTMLKEPYHHLNVLINTPLKNKKEQKEHVEFVVNVFLNGINSSKA"
     gene            9085..10188
                     /locus_tag="RTF91_000885"
     CDS             9085..10188
                     /locus_tag="RTF91_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDZ4943783.1"
                     /translation="MKSFQKNTVLVLSVAFLLTACSKEEAPKIQMPPQPVTTMSVKSE
                     DLPLSFTYPAKLVSDYDVIIKPQISGVIVSKLFKAGDRVKKGQTLFIIEQDKFKAGVN
                     SAYGQTLMAKATFENASKDFNRSKALFSKSAISQKEYDSSLATFNNSKANLVSARAQL
                     ANARIDLDHTEIKAPFDGTVGDALINVGDYVSASTTELVRVTNLNPIYADFFISDTDK
                     LNLVRNTQSGKWDLDNIHANLNLNGEIVKGKLYFIDSVIDAKSGTVKAKAIFDNNNST
                     LLPGAFATITSEGFIQKNGFKVPQIAVKQDQNEVYVYTIVNNKVTKTPVHISYQDNEY
                     AIISSGLKDSDKVILDNFKKIRIGSDVQEVGSK"
     gene            10188..13307
                     /locus_tag="RTF91_000886"
     CDS             10188..13307
                     /locus_tag="RTF91_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HDZ4943784.1"
                     /translation="MFSKFFIERPIFASVVAIIISIAGAIGLVNLPVEQYPSLTPPTV
                     QVSATYTGADAQTIASTVASPIEDAINGVDNMIYMDSTSSPGQMKLTVYFNIGTNPDQ
                     ATVDVNNRISAATAKLPEAVKKLGVTVRKSSSTILEVVSIYSEDGSMNDIDIYNYTSL
                     NILDELKRIPGVGNASAIGNKNYSMRIWLKPDLLNKFGVTANDVISAINEQNAQYATG
                     KIGEEPVVNKSPQVLSITMQGRLQTPQEFENIILRVNEDNSFLRIKDIAQVEIGAEQY
                     NSTGRLNISAAVPIIINLQSGANAVNTAKLIEEKMQELSKNFPQGLKYKIPYDTTIFV
                     KASIKEVIKTFIEALALVLIVMYLFLKNFRSTIIPMIAVPVSLLGTFAILYLLGFSIN
                     LLTLFALILAIGIVVDDAIIVVENIDRILHEDPNISVKDAAIQAMNEVSSPVISIVLV
                     LCAVFIPVSFISGFVGEIQRQFALTLAISVAISGFVALTLTPSLSALFLTRNESKPFY
                     FVQKFNDFFDWSTSVFSNGVAYILKRTIRFLLLFCIMIGTIIYLYKIVPNSLVPSEDQ
                     GVIMSIINLPSGSSIHRTVEEVDTINKNVTQIKSIETSVSLIGYDLFTSSLKENAAAI
                     FFKLKDWSQREQSSDQIIAQLFGQHAADRNALSYFLNPPPIPGLSLTGGFEMYAQNKS
                     GKDYDAIQQDVNKMLELARTRKELANVRTTLDTSFPQYKLIIDRDKMKYYNLNMQDVF
                     NTISATIGTYYVNDFPMLGKNFQVNIRALGDFRNTQDALKNIYVRSSDNQMIPLNSFL
                     SLVRTAGPDDVKRFNLFPAALIQGDPAPGYTSGQAIDAIAEVAKQSLGDEYSIAWSGS
                     AYQEVSSKGTGAYAFILGMVFVFLILAAQYERWLMPFAVITAVPFAVFGSFLLVALRG
                     FDNDIYFQTGLLLLIGLSAKNAILIVEFAMEERLKKGKSVFEAAINAAKLRFRPIVMT
                     SLAFTFGVLPMIFATGAGSASRHALGTGLVGGMIAASTLAIFFVPLFFYLLENFNEWL
                     DKKRGKVYE"
     gene            13300..14778
                     /gene="cmeC"
                     /locus_tag="RTF91_000887"
     CDS             13300..14778
                     /gene="cmeC"
                     /locus_tag="RTF91_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit CmeC"
                     /protein_id="HDZ4943785.1"
                     /translation="MNKIISISAIASCCLLISACSLSPNLNIPEANYSIDNKLGALSW
                     EKENNNSIAKNWWKDFDDENLNKVVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLP
                     KLDGSASGSRAKTAINAPSNRTGEVSYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGF
                     KASEYDYEAARLSVISNTVKTYFNLANAYENENTLKEAYESAKEIYRINDEKFQVGAI
                     GEYELAQARANLESMALQYNEAKLNKENYLKALKILTSNDLNDILYKNQAYQVFNLKE
                     FDIPTGISSTILLQRPDIGSSLEKLTQQNYLIGIARTAFLPSLSLTGLLGFESGDLDT
                     LVKEGSKTWSIGGNFTLPIFHWGEIYQNVNLAKLNKDEAFVNYQNTLVTAFGEIRYAL
                     VARKTLRLQYDNAQASEQSYKKIYKIAKERYDIGEMSLQDYLEARQNWLNAAVAFNNT
                     KHSYANSIVDVIKAFGGGFEQSENTSKNIKEESKNLDMSFRE"
     gene            complement(14802..15053)
                     /locus_tag="RTF91_000888"
     CDS             complement(14802..15053)
                     /locus_tag="RTF91_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943786.1"
                     /translation="MDKAKIIQNLNILFKQRVEFYSYFDKNIAKISNTEVFDFKNAKN
                     LSPEEVYKQFYHFDYAIRKLLPAIYKAYEITDADLDRDF"
     gene            15178..16524
                     /locus_tag="RTF91_000889"
     CDS             15178..16524
                     /locus_tag="RTF91_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HDZ4943787.1"
                     /translation="MNLFQNLALKYSHTMMEKSLQKGFNVELLKKPKEKTPKQDKSYM
                     LYAHVPFCHTFCPYCSFHKYYYDENLAKIYFQNLREEIKIMKDKGFDFNSMYVGGGTT
                     LINEEELLKTLELCKKLFNIEEISCESDPNHIDPSKLSMFKGIIDRLSCGIQSFDDET
                     LKKIARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLLNDLEIAKNLAP
                     QQITTYPLMKSNLTKDNIAKNLGVSIKDNEFAYYLIIREFFKDYTQSNGWNFSLEKNK
                     LNDEYVSSHHEYLGVGSGAFSFLDGELLINAFNLNDYAKFIQEKQNANIAKACFNKKE
                     IIKYVFLTEIFSGKIEIDKFNKTLNCDLEKELFIELLGLKMSGAIIKDQNTLITTDFG
                     QYLFVVLMKDFYTGMDLVRAVFRDDKRLKNKDYIDIMKENIDPLNSTSMEFKAETN"
     gene            complement(16521..16973)
                     /gene="hemJ"
                     /locus_tag="RTF91_000890"
     CDS             complement(16521..16973)
                     /gene="hemJ"
                     /locus_tag="RTF91_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HDZ4943788.1"
                     /translation="MTEWINDYYFWIKWVHYLTFVSWMAGLFYLPRLFVYHTEHKDNK
                     GFIEVVKIQERKLYYYIQTPTMIVTLITGSLMLHAHKEVLMVGAGFMHVKLTCVALLI
                     IFHMHNYYCLKALASDTSTKSGKYFRIYNEFPTLMFIIITLMMVVRPF"
     gene            complement(16957..17427)
                     /locus_tag="RTF91_000891"
     CDS             complement(16957..17427)
                     /locus_tag="RTF91_000891"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HDZ4943789.1"
                     /translation="MVKTFKFIFYFWGAFVLVFTFDQWVKSLTLAGFRWQSEYLDLTY
                     ALNTGVAFSMLSFLEHKLKYLHLALIGVLFIYLFWQKTLLKTHSIAFGMMLGGGVSNL
                     LDRFIYGGVVDMFFWHKWFNFAIFNVADVMINISVALIFIQEIFKKRKKDDRMD"
     gene            complement(17420..18757)
                     /locus_tag="RTF91_000892"
     CDS             complement(17420..18757)
                     /locus_tag="RTF91_000892"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDZ4943790.1"
                     /translation="MKLFGTDGVRGKAGEFLDSFLAMRLAMAAGIYFKDKSITNNILV
                     GKDTRRSGYMIENAIVSGLTSTGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNP
                     YYDNGIKFFDAHGNKLSEDIEKKIEEIYFDDKLIQASKVYMDEIGQAKRIDDVIGRYI
                     VSIKNSFPKDLTLKSLRVVLDVAHGAAYKVAPTVFKELGAEVIVMNDKPNGLNINENC
                     GALHPANLVAEVKRLRADVGFAFDGDADRLVVVDEKGEVANGDSLLGVLALYLKEQGK
                     LQSSVVATIMSNGALKEFLNKHGIELDTCNVGDKYVLEKLKANGGNFGGEQSGHIIFS
                     DYAKTGDGLIAALQFSALMLSKKKSASFILGQVKPYPQLLTNLKISEKKDLDKLKGLK
                     ELKKDLESRNINTLFRYSGTENLIRLLLEAKDIKLLEKEMKNVVEFFKKALNG"
     gene            complement(18848..19873)
                     /locus_tag="RTF91_000893"
     CDS             complement(18848..19873)
                     /locus_tag="RTF91_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HDZ4943791.1"
                     /translation="MKVKSLLIASLVAFSSLNAASLIDEAKNSGLVALPKDQKGVDEI
                     LKQNGVKASEFTLEKAELGKKLYFEPRLSKSGIISCNTCHNLGLGGTDGISAAVGHKW
                     IVNPHHLNSPTVYNAVLNNTQFWDGRAGTLADQAKGPIQADPEMATPAKLAVEKISSL
                     PEYVSEFKKIYGKSGVNFDNIADAIANFERTLITPSRFDKFLEGDEKALTKDEQKGLK
                     LFIDKGCVACHNGINLGGNMQAFEVAGKYKFANLGDFKGDANGMVKTPTLRNVAETAP
                     YFHNGAIWNLKDAIKEMGSVQLGIKISDKEAKSIETFLKSLTGTKPLIVYPQLPISTE
                     KTPKPEL"
     gene            20073..20681
                     /gene="plsY"
                     /locus_tag="RTF91_000894"
     CDS             20073..20681
                     /gene="plsY"
                     /locus_tag="RTF91_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDZ4943792.1"
                     /translation="MENLIIYAFVYLLSSTPFGLILAKIFAKIDIKNEGSKSIGATNV
                     LRVVKEKNPKLAKKLAIATIILDFAKAAIPLLILKFLHYDQALLWSVAVLAIFGHCFS
                     IYLLFEGGKGIATGAGAMIVLLPLEVLTAFIVWMVIGKIFKISSLASLAALFAFVASS
                     FIFNYDLEIHTHAPVFIIAFIIVYKHLPNIKRLIFKEECKVI"
     gene            20666..20983
                     /locus_tag="RTF91_000895"
     CDS             20666..20983
                     /locus_tag="RTF91_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDZ4943793.1"
                     /translation="MQSHIKIKFHFKCIIGILDFERKKKQKIIIKLKAKANEFLNYAE
                     VIAKTKKWYKKEKFYTLEESLDFISLNLKKDFPDLANLNIKIFKPHIIKNAKVGVKLK
                     KKY"
BASE COUNT         7445 a         3397 c         2765 g         7389 t
ORIGIN      
        1 caaattttaa gactttttga tgatatttca catcgtttat tagaggcaag cgggtttatc
       61 gcctttttga ttatattttt aatgctttta agttctttta aaatctttaa aaaacttagt
      121 aaaataagaa aattaggata tttatgcttg gttttggcga gttatcatta ttttttaact
      181 ccgaaagttc ctatgttttg ggaatggagt gctttaatta tagctttatt ttattttata
      241 tttcgttata taacaacatt taaaagttta aaatccaaca attttacttt tatcaaaact
      301 tgaatttaat tctttttgta tgctttctat aaaatcttgc attttaaaaa ctccatcttc
      361 ggatacagct actttcaaag ctgtattttt taccaccatt aaaatttgtg ctccacttaa
      421 ttcataattt gacaaaatat ttacatcaaa atctttttca aataatgctt ttttaggtag
      481 aaatttttcc caaattttaa gcctatcttt aaaatcaggt tttttaaatt ctatcttata
      541 atcaaatctt cttgaaaatg cactatctaa actttctaaa aaatttgttg tagcaataat
      601 aactccacta aaacgctcaa tttgttctaa aaatatattt tgcatttgat tatgcatttt
      661 atcactacca ctactaccat ctacacgcgt gcttaaaaac tgatcagctt cattaagaag
      721 taaaataggg ctttgcttgc aagtttgtac aatattttta taagtgtcaa aaatttttct
      781 tacattttgc tcgctctctc caacccattt actcaaaatt ttcgaacaat caaaactaag
      841 aacagatttt ttcattgatt tagccatagc taaagctgac atagtttttc cagtgccagc
      901 aggtccataa aaaataattt tagcttctat atttttattg ctctttatac cccaagaatg
      961 aagcctttct aagacttttt tatcttgttg tcttaagata ttttctaaaa gttcttttgt
     1021 atttttaggc ataatgatat cattaatatc agtgcttggc tctataagtt caaaaatatc
     1081 ttgatctttt aaaacacttt cgattttaat ttttttactt tgttttggtt caaaatttat
     1141 aatcctttgc aaaacctcat caatgataaa aaaactttta gaaacatctc caaaagcatt
     1201 taaatattca tcatactcaa ttaagtttaa aagaggagca ttttcttgca ataatttttt
     1261 atttttatgt ctttctaagt cattttcact aattaaagaa agtaaagaat tcatttctct
     1321 agaaatcgag ctttcattgc ttaaggcata ttcttctttt aaaagtgcca aaaaaataat
     1381 ttgttcttta tgttcaagat tatattcttt aaaaatatca gctaaaacat tataaaattt
     1441 actttttttt aatctttctt tgatatgttt ttcgtaaagt ttaatttgat tttttatttc
     1501 gctattgtaa gcactttttt gtataaaact taatctttcg tatagttgaa tgcgtgcaaa
     1561 ttcatctttt aaatactcca aataatctgc ataagcctct tgtttctcaa aacttaaacg
     1621 aggttttgct tctaaaaatt ctaaaaaata ttcacttaag ctaagttcac tttgtagtaa
     1681 aacaagggtt aatgtttggg ttttattatt ttctaagctt ttgaaaaaat tcgaattttg
     1741 atttacaaaa cctctttcaa taagtttttt taaatcttcc aaagcatcta aataaatata
     1801 cttatcattt ccaaaaattg ttgataataa agtaaaagca ttgatggaag aaatggaaac
     1861 aacatagttt ctacaaagct ctctaagaat caaagcttca tttttagcac acttaagttc
     1921 tttataaatt tgtgtatctt ctatattttt taaacttaaa aaatttttta attttttcat
     1981 tattttttaa attccttaag ctcatcttca ttaaatttta cacaaatatt ttcatccaaa
     2041 aaatgacctt caaaaggcaa ataacaaatc tttaattttc cattattaag caagaaatta
     2101 ttattaaatt gtaaattttg tagatcttca aaacattcat cacatgtatt tttaagcttt
     2161 tcatgtaaaa gattttgaaa attctgattt tcaatattgt acaaatcatt taattttaca
     2221 aacacatgag cattaatatc ataaacaaaa ttatttaatt ccaagatagc acgactcata
     2281 ccatcttcat aaaaataata ccattcttca aaactaattt tttcatcttg taaaaaaata
     2341 ggcttttgat gaatttgttc aaagctaaat acgcccttat gaataggatg aaattcttta
     2401 aaatcatcat taaaacctat aaaatcaaga ctgtgcttta tacgaatacc atcttgcgtt
     2461 tcaataagtt ctaaagtagt tgttcctaaa ttttctcctt gaaaattttt gttatcatac
     2521 acaagcattt tagaagaatt aattttgtat tttttgcgtt catcttgcca aaaatcattt
     2581 gtcttaataa gcggaatctc taaatttcca tttatatcat caataattaa aaaactagaa
     2641 cttgtttgat ttctatccct atcaaaaagt ggagtcatgg gtgcattatt ataaactatg
     2701 gcaaaaattt ctttatcttg tagacgataa aaatacaatt ctcctttata aacttgtgct
     2761 agagctaaat tgataaaaca aaacatcagc aaaaaaattt tcaacttcca tccttcaatt
     2821 ttgaatacgc gttaaaataa tttttgtacg tgaaatttta tcaaaaaaac tcactttatc
     2881 accacaaact tgataaaaaa tttcataatt ttttgctttt aaattttgtt caaaaccaca
     2941 atcagttttt tctaaatttt taccctgcca caaagcattt gcctttaaaa tatcgcttag
     3001 aatatcttca taatatgtat ttttaaaaaa atttcgatta aatacttttt tatcatagca
     3061 cactgcattg atacaaattt tatctttaat tttgagttca aaaaaggctt gtccaagttt
     3121 ataaacttct aaatttaaag cgttattttc tttttttaaa aaagctgcat cgttaattct
     3181 tatcatagga gaagcaatca aaaccatcaa actttgactt gaaaaatttt gatttttcac
     3241 gctacaagca caaagaaaaa aaacaaaaca caaagttaaa caatatttca aaccttagcc
     3301 ttatttgaga tttttaaaac taatatttaa ctctaaatta agctctttca caagtttcat
     3361 aacagcttgc aaatcatcaa tctgttttgc tacaacacga atttcttcac cacgaattga
     3421 aggattaact ttaagcttac tatctttaat ggctttattg atttttctag cattttcact
     3481 atctatagca tcgtttgcct ttaaaattaa acgaaacatt gctccacttt cacgagaaag
     3541 ctctttaata gcatttggat taatccctct tttgatgagt ttagaaatga ctatatcttt
     3601 taaaacatca agttttcctt cacttgaaga actaagttta aaaactctat ctttttcatt
     3661 aaaatcaagt tcaactttca caccctttaa atcataacga ttgtcaaact cttttttggc
     3721 ttgttcaaaa gcatttttta attcttgttt atctaaagct gctgaaatat caaagctatg
     3781 ttcacttgcc attttccatc cattctttta aattattata aaccatgtcc attaaggcat
     3841 ttaaagattc cttgcttgcc cacgcaacat gaggagtgat aataagattt tctttatttt
     3901 taatacttaa aagttgatga ttttttatca tgggttcaaa ctctaaaaca tcaagcccca
     3961 cgcgaatatt tttttcatct atgattttag ctaaatcatt ttcattgata attccacctc
     4021 ttcctacatt aatcaagatc gcattatcct ttaaaagctt taactcatca aaagtaagta
     4081 gatttttagt tttttcattt aaaggcgcat gaatacttat aatatcacaa gtttttaata
     4141 aatcttgtaa ttccaaatgt ataaaatctg catttttatt ggctccactt gtagaataat
     4201 aataaatttc agctccaaaa atctttgaaa tttttgccac ttctttacct atagtcccta
     4261 agcctataat accatgtttt ttaccactta aagtatttaa aactctacta taatctgtaa
     4321 aaataggact ttcacaccat ttactctctt tactccattt atcataataa agcacttgat
     4381 ttaaaaaagc aaatataagc gcaaaagtat gttgcacaac gctcatagtt gaatatccta
     4441 ctgcattttt tacaatgaca ccttttgctt tagcatactc aacatcaata ttatttactc
     4501 ctgtagcagt ttctaaaatg agttttaaat ctttacaagc atcgataata tctttgtcaa
     4561 ttataacctt gtttgttata gcgacattag catcttttaa acgctctata gtttgttctt
     4621 tattggttgt agcataaatt tgcaaagaac caaatttctc aaaaatactt aaatcataat
     4681 cccccaaagt tgccgcatct aaacaaacaa ttttcatttt tactccttga taatatgtcc
     4741 tacaaattta gaataattat caagcacaag accgcctttc ctaaacccta agccacatcc
     4801 ttcataagca aagaaaacac ctgcttgata gtattcattt tcgcatgaat taaactctac
     4861 atattcttga tagataactt tattgtttcc ataaggacct acattttcat gcaaagtttt
     4921 tccatcttta attatactga tatttgcccc ttctctaccg aaaacaggtt ttttaacata
     4981 atttttaccc tctaaaggag tatcttttgt ttctaaaagt aaagggtggt ttggataaag
     5041 ttcccataaa atttttaaaa ttcccttaga ctgaaataaa agtgtataag cagggtttaa
     5101 aataatcgct ctttgattac gcataatttg agttaaaagc atggcaagtt caccctcttc
     5161 tatagctata tcctcccaag gaataagctt aaaccaatac tcataatttt caccctcttt
     5221 aaaaatacct tcttcgctaa attccacctc atccacaaag gaaaaattag tttgaaaacc
     5281 tgcttcatta gctatatgag cgagtaattt tgtagtgatt tcttcttctt tacttcctgc
     5341 cacacttgaa aaaagaattt tccatccttg ataatgctct tcaaatcctt caacgctttc
     5401 atcaagagtg ataagccttt taaaattatc cattaaactt tcataaatgc tgttaaattg
     5461 cgcactttca tccattccat tttgttttaa aagcgcccat tgcaaaatcg cactttcaaa
     5521 aagagcagtt ggagtatcgg cattaaattc tataagtttt ataggcttgc catcaattcc
     5581 accagctaaa tcaaaacgcc catataaatg ccaatgcact tcattgtccc aactcatctt
     5641 aatcgcatcg acaagattaa aagggattcc aagttcatca aaacgatcat tatcaatcac
     5701 ttcttgtgct gcagcaataa acatatcata aagttcattt actgcttcat aataagcatt
     5761 gacctcactt tctttaacac aaactaactt atcactaata taatcactcc catcctcatc
     5821 agtatgccat gaaaaaccta tgttttctaa ataatctttt tgaagtttat ttacttgtat
     5881 taattgcatc gattatcctt aagaaccaaa agaagaacta gaacttgtag tcttagagtc
     5941 tccaccaaaa aagcctgatt ttttagcgct tgaagcagaa cttgttgtgc ccgctttatt
     6001 aaaactattg acacttcttt ggtaagcact ttgatttgaa aaagcaccgc gttgttgatt
     6061 agcaaaattt tgattattaa aaagttttga acctatccaa cttcccaaaa tagcacccgc
     6121 agcacttgca agcaaagttt ctcctaaact taatcctcca ctgctaactt gcccattatc
     6181 tttagttaaa tttgaagttc cattgtcaat tttagctgct tcttctttaa tcaaagcatc
     6241 catttcttct ttggataaaa ttctctctgt gccattaaga tcttttaaaa ctacccttgt
     6301 ttcatcactt ggatattgat ctttaatctt atattgtcct ggtgcagttt cttcgataat
     6361 tacaaaggct ccttgagcac tagctgcttg atttaaaaca tctgaatttt cattattatt
     6421 tccacaacct gccaaagcac cagctgcaac agctgctaaa ccacctatca taccaatttg
     6481 aatgattttt ttgatttttt tcataagttt atcctaaaaa cagaaaattt aaattagaaa
     6541 ttttaacaaa aaataataaa tattttttaa tactaaatgg agtttataaa tatcaaagaa
     6601 aaaaagccct ttcgggcttt cgggttagag tcttgactcg tatcgtctaa gcatataaag
     6661 ccttttaagc atttttttgc gtgctgaaat tttttgtttt ttgcgaattt cagtcatagg
     6721 ctcaaaaaac cttctcgctc ttacttcagt tacaactaga tttctatcta cttgtttctt
     6781 aaatttgcga tacgcttcat caaaagactc attaggatgc accttaattc ctggcacagt
     6841 cctcaccacc tttctgtgta aatttttgtt gtcaagcata attataaaac acttcttatt
     6901 aattccaact tataacaaaa tctaaaaatt gttttagttt ttatcggcta taatctttaa
     6961 ttgcaaaatg ttaaaattat aattaaggac taaagatgca aggacacatt acaaactata
     7021 caaaaaaacg atattttgta tatttaattg caagtattat catatttacc ttacctttta
     7081 taagaattaa tgataatcat ttttttcttt taaattttga tcactctaaa ttaaatttat
     7141 tttttatttc tttctcaacg caagaatttt atcttatgcc ttttgttctt atatttcttt
     7201 ttttatttat attttttatt accactttag gtggaagaat ttggtgtgct tggagttgtc
     7261 cgcaaacaat ttttagggtt atatatagag atataatcca aactaaattt cttaaaattc
     7321 gtaaaaatat caacaataaa caaaaagaat atgaaagaga atattttaaa aaatttactg
     7381 gagtaataat tttttatttt atatctttag ttgctgtaag taatttactt tggtatttta
     7441 tccctcctga agattttttc aattatattc aaaatcctag tgagcattta tttttacttg
     7501 gaattttatt ttgcactagc ttatttttta ctttagatat tacctatttg caagaaaaat
     7561 tttgcactta tgtttgcccg tatgcaagaa tacaatctgt tatgtttgat catgatacaa
     7621 tgcaagtaat ttatgatgaa aaacgtgggg gcttgatcta tgatggacac actaaacttc
     7681 ataaaaaacc acctgaggga gaatgtatag gctgtgaagc ctgtgttagt atctgcccaa
     7741 cacatattga tatacgcaaa ggaatgcaac ttgaatgtat caattgtctt gaatgtgccg
     7801 atgcttgctc aaaagtacaa aataaattta atagaccaag tttaatcaat tggacaagtg
     7861 caaaagctat tgaaacgcat tctaaagttc attatttaag atttagaacg atagcatatt
     7921 ttatagttct tttaattgct ttgctagctt taattatcat gggaagcaaa aaagaaagta
     7981 tgcttttaaa tatcaatcgc agtagtgaat tatataatat ttcaaatgtt aaaggtgaat
     8041 tagttatttc aaatgcttat acctttttgt ttcaaaatac agattctaag cctcatgaat
     8101 attattttac agcaaattta gaaggaataa atgatggaat tgaaatcaca agaccaagca
     8161 aaccttttac attaaaagcg ggagaacaag ttaaaaaaat agttgtcatt aaagctacaa
     8221 aaaaattagc aaataatgat aaaaaagatg taatctttcc tctgcatata aaagcttatg
     8281 ctaaggataa tgaaaaaatt tcagttttta gaaaaagtat ctttgtatat cctaaaagca
     8341 ctcttataaa ggataaaaat gaactcagat aaaacaccat cgcaaaaggt tttgactaga
     8401 caagaaaaaa ttaaaacagt ggctttagaa ctttttttaa caaaaggata tcaagaaaca
     8461 agtttgagtg atattattaa attatctgga ggatcttatt ccaatattta tgatagtttt
     8521 aaaagtaaag aagggttgtt ctttgaaatt ttagatggta tatgcaaaaa gcactttcat
     8581 cttatttatt ctaaaacaca agaaattgaa aatggcacct taaaagaaat tttaacttct
     8641 tttggcttag cttttataga aatttttaat caaccagaag ctgtagcttt tggtaaaatt
     8701 gtttattctc aggtttatga taaagataga catcttgcta attggataga aaataatcaa
     8761 caaaattttt cctataatat acttatggat tttttcaagc aacaagacaa ttcttatatg
     8821 aaacaaaatg cggaaaaact tgcagttctc ttttgcacta tgttaaaaga accttatcac
     8881 catcttaatg ttttaattaa taccccatta aaaaataaaa aagaacaaaa agagcatgtt
     8941 gaatttgttg taaatgtttt tctaaatgga attaatagct caaaagcttg aaaaataatt
     9001 ttattaaccg atatttagat ataattagcc aaaaattttt gtaataaata ttacaatttt
     9061 aacttaattt ttcaaggcaa aaccatgaaa tcatttcaaa aaaacactgt tttagtttta
     9121 agtgttgcgt ttttactcac tgcttgcagt aaagaagaag caccaaaaat tcaaatgcca
     9181 cctcaacctg taacaaccat gagtgttaaa tctgaagatt tgccacttag ttttacctat
     9241 cctgctaaac ttgtcagtga ttatgatgtt attataaaac ctcaaattag cggagtaata
     9301 gtaagtaaac tttttaaagc tggcgataga gtaaaaaaag gacaaacatt atttatcata
     9361 gagcaagata aatttaaagc cggcgttaat tcagcttacg gacaaacctt aatggctaaa
     9421 gcaacttttg aaaacgcaag caaggatttt aatcgctcca aagctctttt tagcaaaagt
     9481 gcgatctctc aaaaagagta cgactcttct cttgctacat ttaataattc aaaagccaat
     9541 ctagtaagtg ctagagcaca gcttgcaaat gcaagaattg atctagatca tacagaaata
     9601 aaagctcctt ttgatggtac tgtaggagat gctttaatta atgtaggaga ttatgtaagt
     9661 gcctcaacaa ctgaactagt tagagttaca aatttaaatc ctatttatgc agattttttc
     9721 atttcagata cagataaact aaatctggtt cgcaataccc aaagtggaaa atgggattta
     9781 gataacatcc atgcaaattt aaatcttaat ggagaaatcg tgaaaggcaa actttatttt
     9841 attgattcag ttatagatgc taaaagtggg acagtaaaag ccaaagctat atttgataac
     9901 aacaactcca cactcttacc aggtgctttt gcaacaatta cctcagaagg ttttatacaa
     9961 aaaaatggtt ttaaagtgcc tcaaatagcc gttaagcaag atcaaaacga agtttatgtt
    10021 tatactatag ttaataacaa agtaaccaaa actccagttc atataagtta tcaggataat
    10081 gaatacgcca ttattagttc aggacttaaa gatagtgata aagttatttt agataatttc
    10141 aaaaaaattc gtataggctc tgatgttcaa gaagttggga gtaaataatg ttttctaaat
    10201 tttttataga aagacctata tttgcttctg tagtcgctat aataatttca atcgccggag
    10261 ctattggttt agtaaatcta ccagtggaac aatacccttc tttaactcca ccaactgttc
    10321 aagtaagtgc cacttataca ggggcagatg ctcaaaccat tgcctcaacc gttgcaagtc
    10381 ctatcgaaga tgctattaat ggtgtagata atatgattta tatggactct acaagctcac
    10441 caggacaaat gaaattaact gtttatttca atataggaac caatccggat caggcaacag
    10501 ttgatgtaaa caacagaatt tcagcagcaa cagccaaact tccagaagcg gtcaaaaaac
    10561 ttggggttac tgttagaaaa tcatcttcta ctatacttga agtagtttcc atatactcag
    10621 aagatggttc aatgaatgat atagatatct ataactatac ttctttaaat attttagatg
    10681 aattaaaaag aattcctgga gttggtaatg cttctgcgat aggaaataaa aattattcta
    10741 tgagaatttg gttaaaacct gatttattaa ataaatttgg tgttaccgca aatgatgtta
    10801 taagtgcaat caatgaacaa aacgctcaat acgctacagg taaaatcgga gaagaacctg
    10861 tagtcaataa atcaccccaa gttctttcta tcactatgca aggaagactt caaactccac
    10921 aagaatttga aaatatcatc ttaagagtta atgaagataa ttctttctta agaattaagg
    10981 atatagctca agtagaaatt ggagcagagc aatacaattc aacgggtcgc ttaaatataa
    11041 gtgcagctgt gccaattatt atcaatttac aatcaggagc taatgctgta aatactgcaa
    11101 aactcattga agaaaaaatg caagaacttt ctaaaaattt tccacaagga ttaaaatata
    11161 aaattcctta tgatacaacc atatttgtta aagcctctat caaagaagtt attaaaacct
    11221 tcattgaagc tttagcacta gttcttatcg taatgtatct tttcttgaaa aacttcagat
    11281 caactatcat tcctatgata gcagttcctg tttctttatt gggaactttt gccatacttt
    11341 atcttttagg ttttagtatc aatcttttaa cactttttgc tcttatttta gctattggaa
    11401 ttgttgtaga tgatgccatt attgttgttg aaaatattga cagaattttg cacgaagatc
    11461 ccaatatttc agttaaagat gcggcaattc aagctatgaa tgaagtaagt tcacctgtta
    11521 tttctatagt tcttgtattg tgtgctgttt ttatacctgt ttctttcatt tcaggatttg
    11581 taggagaaat tcaaagacaa tttgctctta ctttagcaat ttctgttgct atctcaggat
    11641 ttgttgcact tacgcttact ccttctttat ctgctttatt tttaacaaga aatgaaagta
    11701 aaccttttta ttttgttcaa aaattcaatg atttttttga ctggagtact tctgtattta
    11761 gcaacggtgt tgcttatata cttaaaagaa ctattcgctt tttacttctt ttttgcatca
    11821 tgataggaac aattatatat ctttataaaa ttgttcctaa ttctttagtt ccttctgaag
    11881 atcaaggagt tatcatgagt attatcaatc ttccttctgg atcatctata cacagaaccg
    11941 ttgaagaagt tgatacaatc aataaaaatg ttactcaaat aaaaagtatt gaaacaagcg
    12001 tatcccttat aggatatgat ttattcacaa gttctttaaa agaaaatgct gcggcaatat
    12061 tttttaaact taaagattgg agtcaaagag agcaaagctc tgatcaaatc attgcacaat
    12121 tatttggaca acatgcagca gatagaaatg cgttaagtta ttttttaaat ccaccgccaa
    12181 taccaggtct tagtttaaca ggtggctttg aaatgtatgc tcaaaataaa agcggtaaag
    12241 attatgatgc catacaacaa gatgtcaata aaatgcttga acttgcaaga acaagaaaag
    12301 aacttgcaaa cgtaagaact actcttgata cgagttttcc gcaatataaa ctcatcatcg
    12361 atagagataa aatgaaatac tataatctta atatgcaaga tgtttttaat acaatcagcg
    12421 caactatagg gacatattat gttaatgatt ttcctatgtt aggtaaaaat ttccaagtaa
    12481 atatcagagc tttaggagat tttagaaata ctcaagatgc attaaaaaat atctatgtta
    12541 gatcaagtga caatcaaatg atccctttaa attcattctt aagccttgta agaactgcag
    12601 gtcctgatga tgtaaaaaga tttaatcttt tcccagcagc tttaattcaa ggagatcctg
    12661 ctccaggata tacctcaggg caagccattg atgctattgc tgaagtagca aaacaaagtc
    12721 taggagatga gtattctatt gcttggtcag gatcggccta tcaagaagta agttctaaag
    12781 gaactggagc ttatgccttt attttaggta tggtatttgt atttttaatc ttagcagcac
    12841 aatatgaaag atggctaatg ccatttgctg ttatcacagc cgttcctttt gcagtttttg
    12901 gctctttttt acttgtagca cttagaggat ttgacaatga tatatacttt caaacaggac
    12961 tgttactttt aataggcctt tctgctaaaa atgctatttt aattgtagaa tttgcgatgg
    13021 aagaacgttt aaaaaaagga aaaagtgttt ttgaagcagc aattaatgca gctaaattaa
    13081 gatttagacc tattgttatg acttctttag catttacttt tggagttttg ccaatgattt
    13141 ttgcaacagg ggcaggaagt gcttcaagac acgccttagg aactggactt gtaggaggaa
    13201 tgatcgcagc atcaacttta gcgatattct ttgtgccttt atttttctat cttttagaaa
    13261 atttcaatga atggctagat aaaaaaagag gtaaggttta tgaataaaat aatttcaatt
    13321 agtgctatag caagttgttg tcttttgatt tcagcttgct ctttaagtcc aaatttaaat
    13381 attcccgaag caaactatag cattgataat aagcttggag ccttatcttg ggaaaaagaa
    13441 aacaataatt ccattgcaaa aaattggtgg aaagactttg atgatgaaaa tttaaataaa
    13501 gttgttgatt tagcactcaa aaataataat gatttaaaac ttgcctttat acacatggag
    13561 caagctgctg ctcaattagg tatagatttt agcagtttgt tgccaaaatt ggatggtagt
    13621 gcaagtggaa gtcgtgcaaa aacagccata aatgctccaa gtaatcgaac tggagaagta
    13681 agctatggta atgattttaa aatggggctt aatttaagtt atgaaatcga tctttgggga
    13741 aaataccgtg atacatatcg tgcctcaaaa tcaggcttta aagcaagtga atacgattat
    13801 gaagcagcaa gactttctgt gatttcaaat acagttaaaa cttactttaa tctcgcaaat
    13861 gcatatgaaa atgaaaatac tctaaaagaa gcttatgaat ctgcaaaaga aatttatagg
    13921 attaatgatg aaaaatttca agttggcgct ataggtgaat acgaacttgc tcaagcaagg
    13981 gctaacttag aaagtatggc tttgcaatat aatgaagcaa aattgaataa agaaaattac
    14041 cttaaagctc taaaaatttt aacttcaaat gatttaaacg acatacttta taaaaatcaa
    14101 gcctatcaag tttttaatct taaagaattt gacattccaa ctggaatttc aagcaccatc
    14161 ttacttcaac gtcccgatat tggctcttct ttagaaaaat taactcagca aaattatctc
    14221 attggaatag ctcgcacagc tttcttacct agtctttctt tgacaggatt attaggattt
    14281 gaaagcgggg atttagacac cttagttaaa gaaggttcta aaacttggag cataggtggg
    14341 aatttcactc tgcctatttt tcactggggc gaaatttatc aaaatgtaaa tttagccaag
    14401 cttaataaag atgaagcttt tgtgaattat caaaatacct tagtaactgc ttttggagaa
    14461 attcgttatg ctttagtagc tagaaaaacc ctacgcttgc aatacgataa tgcacaagca
    14521 agcgaacaat cttacaaaaa aatctacaaa attgctaaag aacgctatga tataggggaa
    14581 atgtctttac aagattattt agaagcacgt caaaattggc ttaatgctgc agttgctttt
    14641 aataatacca aacattctta tgctaattcc atagtagatg taattaaagc atttggaggt
    14701 ggatttgagc aaagtgaaaa tacaagtaaa aacataaaag aagaatcaaa aaatttagat
    14761 atgtctttta gagaatagtt tattctattc tctaaataaa tttaaaaatc tctatctaaa
    14821 tccgcgtctg taatttcata agctttataa atcgcaggta ataacttcct tatagcataa
    14881 tcaaaatgat aaaattgctt atacacctct tctggactta aatttttagc attcttaaaa
    14941 tcaaacactt cagtattgct gattttagca atatttttat caaaataaga gtaaaactct
    15001 accctttgct taaacaaaat atttaaattt tgaataattt tagctttatc catatttaca
    15061 tcctttttaa ataatttaaa aacttaatgc tatttttatt taagaaataa aaatttactc
    15121 ctattttagc taaaaattga taaagttata tattaaatat tttaatatag gccacttatg
    15181 aatttatttc aaaatttagc tttaaaatac tctcatacta tgatggaaaa atctctccaa
    15241 aaaggtttca atgtcgaact tttaaaaaaa cctaaagaaa aaactccaaa acaagataaa
    15301 agctatatgc tttatgctca tgtacctttt tgccatactt tttgtcctta ttgtagtttt
    15361 cataaatact attatgatga aaatttagcc aaaatatatt tccaaaatct tagagaagaa
    15421 attaaaatca tgaaagataa aggatttgat tttaactcca tgtatgtagg cggtgggaca
    15481 accctaatta atgaagaaga attgttaaaa accttagaac tttgtaaaaa attattcaat
    15541 atagaagaaa tttcatgtga aagtgatcca aatcatattg atccaagtaa actttctatg
    15601 tttaaaggca taatcgatcg tctaagttgc gggattcaaa gctttgatga tgaaaccttg
    15661 aaaaaaatag caagatataa taaatttgga tcttctaaag aacttcaaga aaaaatttca
    15721 aaagctttgg gaattttacc tatttttagc atagatctta tttttaatct tccaggacaa
    15781 agcgaaaaac aacttttaaa tgacttagaa attgctaaaa atttagctcc acaacaaatc
    15841 acaacctatc ctttaatgaa atcaaatctt actaaagata atatcgctaa aaatctaggt
    15901 gtaagtatca aagataatga atttgcttac tatctaatca tacgcgaatt ttttaaagac
    15961 tacactcaaa gcaatggatg gaatttttct ttggaaaaaa acaaactcaa tgatgaatat
    16021 gtcagctccc atcatgaata tctaggagtg ggtagtggag catttagttt tttagatgga
    16081 gagcttttaa tcaatgcctt taatctaaat gattatgcta aattcataca agaaaaacaa
    16141 aatgctaata tagccaaagc ttgttttaat aaaaaagaga ttatcaagta tgtcttttta
    16201 actgaaattt tttcgggaaa aatagaaatt gataaattca acaaaactct aaattgcgat
    16261 cttgaaaaag aacttttcat agaactccta ggacttaaaa tgagtggtgc tatcataaaa
    16321 gatcaaaata ctttaatcac aactgacttt ggtcaatatc tttttgtggt tttaatgaaa
    16381 gatttttaca caggcatgga tcttgtgcgt gcagtattta gagatgacaa gcgtcttaaa
    16441 aataaagatt atatcgatat tatgaaagaa aatatcgatc cacttaattc cactagcatg
    16501 gaatttaaag cggagacaaa ttaaaatgga cgaacaacca tcattaaagt gataataata
    16561 aacattaaag ttggaaattc gttataaatt ctaaaatatt tcccactttt agtagaagta
    16621 tcacttgcta aagcttttaa acagtaataa ttatgcatat gaaaaataat caaaagtgca
    16681 acacaagtaa gtttaacatg cataaatcca gcacctacca ttaaaacttc cttatgagca
    16741 tgcaacatta aacttcctgt gattaaagtc acaatcattg taggagtttg tatataataa
    16801 taaagttttc tttcttgaat ttttacaacc tcaataaaac ctttattgtc tttatgttca
    16861 gtatggtaga caaaaagacg aggcaaataa aaaagtcccg ccatccaaga aacaaatgtc
    16921 aaataatgca cccatttaat ccaaaaataa taatcattaa tccattctgt catctttttt
    16981 ccttttttta aatatttctt gtatgaaaat caaagccaca cttatattta tcatgacatc
    17041 tgctacatta aaaatagcaa aattaaacca tttgtgccaa aaaaacatat ctaccacacc
    17101 accatatata aaacgatcca ataaatttga aacgcctcca ccaagcatca ttccaaaggc
    17161 tatactatga gtttttaaaa gtgttttttg ccaaaaaaga taaataaaaa gcacgccaat
    17221 taaagcaaga tgcaaatatt ttaacttatg ctctaaaaaa cttaacatcg aaaaagccac
    17281 acctgtattt agagcataag ttaaatctaa gtattcactt tgccacctaa accctgctaa
    17341 agttaaagat tttacccact gatcaaaggt aaaaaccaaa acaaaagcac cccaaaaata
    17401 aaaaataaat ttaaaagttt taaccattta aagctttctt aaaaaactcc acaacatttt
    17461 tcatttcttt ttctaaaagc ttaatatctt tagcctctag taaaagtctt attaaatttt
    17521 ctgttccaga atagcggaat aaagtattga tatttctact ttctaaatct tttttcaact
    17581 cttttaaacc tttaagttta tccaagtctt ttttttctga aattttaaga ttggttaaaa
    17641 gctgaggata aggtttaact tgacctaaaa taaaacttgc agattttttc ttagaaagca
    17701 ttaaagcact aaattgcaaa gcagctatca aaccatctcc agtttttgca taatcactaa
    17761 aaataatatg tccactttgt tctccgccaa aatttccacc attggctttt aatttttcaa
    17821 gcacatattt atcacccaca ttacaagtat caagttcgat accatgcttg tttaaaaact
    17881 cttttaaagc accgttactc attatggtag ctacaacgct tgattgtaat ttaccttgct
    17941 ctttaagata aagtgctaaa actcctaata aactatctcc attagccact tcaccttttt
    18001 catctacaac taccaagcga tccgcatcac catcaaaggc aaagcccaca tctgcacgta
    18061 aacgctttac ttcagcaact aaatttgcag gatgtaaagc tccacaattt tcattgatat
    18121 taagcccatt aggcttatca ttcattacta taacctcagc tcctagttct ttaaaaaccg
    18181 taggtgctac cttataagct gccccatgag ccacatctaa aaccacacgc aaagacttta
    18241 aagtaagatc ttttgggaaa gaatttttaa tagaaacaat atatcttcct attacatcat
    18301 caattctttt tgcttgtcct atttcatcca tatatacctt agaagcttgt ataagtttat
    18361 catcaaaata aatttcttct atttttttct ctatatcttc acttaattta tttccatggg
    18421 catcaaaaaa tttaatacca ttgtcataat aaggattatg tgaagctgaa atcataatcc
    18481 ctgcatcaca acgcatatct tcagttaaaa acgcgattgc aggagttggc ataggaccaa
    18541 tttgtataac attgtatcct gtagaagtaa gtcctgaaac tatagcattt tctatcatat
    18601 agccacttct tcttgtatct tttcctacta agatattatt tgtaatactt ttatctttga
    18661 aataaatacc tgcagccatt gctaaacgca tagccaaaaa actatctaaa aattcacctg
    18721 cttttccacg cactccatca gttccaaaaa gcttcattgc aaacctttct gcaaaatttg
    18781 aagaaattat aacaaagcta agataaagaa atttaaacaa gctctaaaaa tagagcttgt
    18841 tcagatctta tagttcaggt ttaggggttt tttcagtaga aataggaagt tgtggataaa
    18901 cgattagtgg ttttgttcct gttaaagatt ttaagaaagt ttcaatactt tttgcttctt
    18961 tatcagaaat tttaatacct aattgcacac tacccatttc cttaatagca tcttttaaat
    19021 tccaaatagc gccattatga aaatacggag cagtttcagc aacatttctt aaggttggag
    19081 tttttaccat gccgtttgca tcacccttaa aatcacccaa atttgcaaat ttatacttac
    19141 cagcaacttc aaatgcttgc atattgccgc ctaaatttat accattatga caagctacac
    19201 aacccttatc tataaagagt tttaagcctt tttgttcatc ttttgttaaa gctttttcat
    19261 ctccttctaa aaatttatca aaacgagatg gagtgatcaa agttctttca aaatttgcaa
    19321 ttgcatcagc aatattatca aaattcacac cacttttgcc atagattttt ttaaattcac
    19381 ttacatattc aggtaaagat gaaatttttt ctactgcaag tttggcagga gttgccattt
    19441 caggatcagc ttgaattggt cctttagctt gatcagctaa tgttcctgca cggccatccc
    19501 aaaattgagt attatttaaa accgcattat aaactgttgg tgagtttaaa tgatgaggat
    19561 ttactatcca tttatgacct actgcagcac tgattccatc tgttccgccc aatcctaaat
    19621 tgtgacaggt attacaagaa atgatgccac tttttgaaag gcgtggttca aagtaaagct
    19681 ttttaccaag ctctgctttt tcaagagtaa attcactagc ctttactcca ttttgtttta
    19741 aaatttcatc aacacctttt tgatcttttg gtaaggcaac aagacctgaa tttttagctt
    19801 cgtctataag acttgcagca tttaagcttg aaaaagcaac caaggatgcg attagcaatg
    19861 attttacttt cattaataaa ctcctaattt aaaatagatt aacaacaaaa taataatcat
    19921 ttaaatctta aaaaaagata aatattatta aaaaatattt ataattaatt aatactattt
    19981 ttatcttaaa aattattttt ttgtttattt attttcataa gatataattt aattcacaaa
    20041 tcttaatttt aagacggttt gaaaaggata ttatggaaaa tttaataatt tacgcttttg
    20101 tatatcttct aagttcaact cctttcgggt taatcctagc taaaattttt gccaaaattg
    20161 atatcaaaaa tgagggttca aaaagtatag gagcaaccaa tgttttaaga gtggtaaaag
    20221 aaaaaaatcc taagctagca aaaaagcttg ctattgccac gatcatttta gattttgcaa
    20281 aagcagctat tcctttacta attctaaaat ttcttcatta tgatcaagct ttactttgga
    20341 gtgtagcagt tttagctatt tttggacact gtttttcaat ttatttgcta tttgaaggag
    20401 gcaaaggcat agcaacagga gcaggtgcta tgatagtttt acttccattg gaagtgctta
    20461 cagcatttat tgtttggatg gttattggaa aaatttttaa aatatcttca ctggcttctt
    20521 tagcagcttt atttgctttt gttgcaagtt cttttatatt taattatgac ttagaaattc
    20581 atacacacgc acccgttttt atcatcgctt ttattatagt gtataaacat ctacctaata
    20641 ttaaaagatt gattttcaaa gaagaatgca aagtcatata aaaataaaat ttcactttaa
    20701 gtgtatcatt ggtatactag attttgaaag aaagaaaaaa caaaaaatca ttatcaaact
    20761 taaagccaaa gcaaacgaat ttttaaacta tgccgaagta attgctaaaa ctaaaaaatg
    20821 gtataaaaaa gaaaaatttt acactcttga agagtcttta gactttataa gcttaaattt
    20881 gaaaaaagat tttcctgatt tagctaatct taacataaaa attttcaaac cccatataat
    20941 aaaaaatgcc aaggttgggg ttaaattgaa aaaaaaatat taattttttt taaaga
//
LOCUS       DAPWAA010000026        20699 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.026, whole genome shotgun sequence.
ACCESSION   DAPWAA010000026 DAPWAA010000000
VERSION     DAPWAA010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20699)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20699)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20699
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.026"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..699
                     /locus_tag="RTF91_000896"
     CDS             <1..699
                     /locus_tag="RTF91_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDZ4943794.1"
                     /translation="LKTHMPIIACIAAAIISAMFLFKGLNNVSTLDILQNFWIIGIIG
                     TISYVVTFAIVKIVKKTELNKTTDRIFSWFQIFTASSFAFSHGANDIANAIGPFAAIL
                     DVLKNGTINATSPVPFAALAMFGVALVAGLWFLGKEVITTVGSKLATIRPTTGFSAEL
                     GASIVILLATQFGIPVSSTHILIGAVLGIGVYNKNANWIMMKPIGLAWIITLPAAGIM
                     AALVFLGFKLSLGI"
     gene            complement(707..1885)
                     /locus_tag="RTF91_000897"
     CDS             complement(707..1885)
                     /locus_tag="RTF91_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDZ4943795.1"
                     /translation="MIIKNAKIYGNSLQDIEIKEGKITNIGFNLQDEEILDAKGMTLL
                     PSFVDLCVSLKNDKFSLANLELLENECLKGGVSGIVLRDCMDFDEESFALFLQNLAQR
                     KMQIFPSVRVKDANGKLKNLATLLNKGACALELDSSLDANTLKVSSQYAFMKDSPLFV
                     RCHDKDFDDNGVMNDCEMSFELGLIGMSKIAETSQVAKMKELAKFYKNKVIFDLLSLK
                     DSLMLLDDKDLKLVSIHHLIKDDTACEDFNTAAKLMPPLRSKEDVLALKQALKEEKIS
                     FLTSLHSAKSISLKDLAFDEAAFGIHSMCEFISLCYTFLVKEGFLTWQELCKFTSKNP
                     SKFLDLNSGVIEVGKEANLVLFDENEEIFAPKSSLYSNDKLFGKVKMHIILGKNILGK
                     "
     gene            complement(1895..2791)
                     /locus_tag="RTF91_000898"
     CDS             complement(1895..2791)
                     /locus_tag="RTF91_000898"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDZ4943796.1"
                     /translation="MMDIAVIGAGKWGSALHLALKENHTCFISSLHQRDLEDFVSIEE
                     ALKCEYLVFALSSQGMRAWLKQNFINKGQKILIASKGIEDQSCQFLDEIFLDFVSKEN
                     FCVLSGPSFAAEVMQKLPTALMISGVNQDLCKKFASFFPDFIKTYIDDDVRGAEICGA
                     YKNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFDAKEETFLGLSGAGDLFL
                     TATSVLSRNYRVGLKLAQNQKLDSILTELNEVAEGVKTAYAIEKLAKTKGIYTPIVNE
                     VVAIFKGKSVQEATQNLLKQND"
     gene            complement(2788..4206)
                     /gene="gatB"
                     /locus_tag="RTF91_000899"
     CDS             complement(2788..4206)
                     /gene="gatB"
                     /locus_tag="RTF91_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HDZ4943797.1"
                     /translation="MFEVVIGLEVHTQLNTKTKIFCSCATSFGEAPNTNVCPTCLALP
                     GALPVLNEEAVKKAIAFGKAVNATINKKSVFNRKNYFYPDLPKAYQISQFDIPIVEKG
                     ELFINVNGENKRIGITRAHLEEDAGKNIHESNFSKVDLNRAGTPLLEIVSEPELRSSD
                     EAVAYLKKLHSIIRFLDISDANMQEGSFRCDANVSIRPKGDTKLYTRVEIKNLNSFRF
                     IQKAIEYEIKRQSEAWEDGSYEQEVVQETRLFDTTNLITKSMRGKEEAAEYRYFPDPD
                     LLPVLLKDKFLDIKIPELPDEKKARFISELGIKEGDAEVLISSLEMSRFFESLISQNL
                     NPKFCVNWLNTELMGLLKGELTIENSPVDAQKLGDLIKRIEDGTISAKAAKDVLAFVF
                     ENTTATVDETIEKLGLKQVSDDSAIEAVIEQILNANADKVAEYKSGKDKLFGFFVGQA
                     MKEGKGAFNPAKVNEILKAKLS"
     gene            4323..4817
                     /gene="luxS"
                     /locus_tag="RTF91_000900"
     CDS             4323..4817
                     /gene="luxS"
                     /locus_tag="RTF91_000900"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDZ4943798.1"
                     /translation="MPLLDSFKVDHTKMSAPAVRLAKVMKTPKGDDISVFDLRFCTPN
                     KDIMSEKGTHTLEHLFAGFMRDHLNSNSVEIIDISPMGCRTGFYMSLIGKPNEKSIAK
                     AWEEAMKDVLNVSDQSKIPELNIYQCGTCAMHSLDEAKQIAQKVLNLGIGVMSNEELK
                     LENA"
     gene            5113..6105
                     /locus_tag="RTF91_000901"
     CDS             5113..6105
                     /locus_tag="RTF91_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopenicillin N synthase family oxygenase"
                     /protein_id="HDZ4943799.1"
                     /translation="MNLPILDLQVYEKDKSTFLKNLREITSKIGFFYLINSGIDKNLN
                     EKLFKLGKDFFNLPRSSKELISMVHSPQFRGYTSEGSEYTAGTKDYREQLDIGTERNA
                     FKWDLNSPLWQRLEGPNLWPNEIPELKETFLAWHEQTKKACLKLLKAFAQCLNLPSNA
                     FDKLYGKNSYEHCKIIHYPKSSKNITQGVGSHKDGGLITFVFQEKQSGLEAFVDNKWF
                     SIPPLENSVVVNIGEFLELATNGYLKATIHRVNLSPKERFSIAYFLGVQLDKDIPIFK
                     LNPEFAKESKGVDTDPKNPLLRNVASNYFKRMIRSHPDVASIYHSDLIEKFKFA"
     gene            6115..6885
                     /locus_tag="RTF91_000902"
     CDS             6115..6885
                     /locus_tag="RTF91_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDZ4943800.1"
                     /translation="MTLFAKAFCVATLFTGFAWANEELKVGSSITPHADILRFIKSAL
                     QKQGYDLKIYEFNDGVIPNVMVENGELDANYFQHEPYLKEFNQRQGTHLVKVASIHIE
                     PMAVYSKKHKEFNPKEGESISIPNNPTNESRALRIVASKGIIEVKDNELITPLDITKN
                     PKKLKFVELKDAQLTRSLDDVDYSLVNSNFAILAGLNPVKDGLYTESKYSKYGNIIAV
                     KEGNENLPKIKALVKALQSNEVKKFIEEKYQGALIPTF"
     gene            6896..9160
                     /gene="metE"
                     /locus_tag="RTF91_000903"
     CDS             6896..9160
                     /gene="metE"
                     /locus_tag="RTF91_000903"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDZ4943801.1"
                     /translation="MKNSIISYPRIGANRELKFAIEKYFKNQSSKEELLKSAKNLRIR
                     HWQEIQKAEIDFIPSNDFSFYDNVLDTAVLFNIIHTKYKNLNLESLDEYFAQSRGYQG
                     KNGDVRALAMKKWFNTNYHYLVPECDNADIIALTGDKIFKEYLEAKELGIESKPVLIG
                     IFTLFKLIAFKDKQTQKLAKEKLLNAYIDLFNKLNELKVQWFELDEPYLVYDLSKEDI
                     VLFEELYQELLKHKKDLKILLQSYFGDLRDVYPKLLESKFDALGLDFVEGKQSLALIQ
                     QYGFTKDKILFAGIVNGKNIYANDYAKSLKLIKELQKYTQNIILNTSCSLLHVPYSTE
                     FESKLDPSYLRLFAFAKEKLKELKDLKEILNSSEENPLFSTNQELFKNIPERLDEKVK
                     ARLKALKKEDFIRTPSFKERALIQKEFLKLPILPTTTIGSFPQSADVRSNRLAFKQEK
                     ISAQNYTEFNQQKIKECIQIQEEIGLDVLVHGEFERNDMVEYFGENLKGFLFTQNGWV
                     QSYGTRCVKPPVIWGDVSRTKPITLAWSKFAQSLSQKIVKGMLTGPVTILNWSFPRED
                     ISLKESTQQIALAIRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHDEYLDWAIPA
                     FNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLKAIHF
                     KTEVGPGIYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVIASL
                     KNLVTATKKIREQL"
     gene            9170..10018
                     /gene="metF"
                     /locus_tag="RTF91_000904"
     CDS             9170..10018
                     /gene="metF"
                     /locus_tag="RTF91_000904"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002868571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HDZ4943802.1"
                     /translation="MRSFSFEVFPPRKDESIKNLNTILDDLGQLSPNFISVTFGAAGS
                     INSQNTLEVASLIQEEYKIPSIVHLPCIHSNKEKIAHILQRCKEKKIKKILALRGDVC
                     ENLQRSKDFSYASDLISFIKKQEDFEIYAACYPEKHNESKNFIEDIQHLKTKVNVGTN
                     KLITQLFYNNEDFYNFKQNCALADINIPIYAGIMPITNKRQVLKISQLCGAKIPPKFV
                     KILEKYENNALALEDAGIAYACDQIVDLITSGVDGIHLYTMNKSKAAIKIYEAIKYLL
                     KEELRT"
     gene            complement(10042..10227)
                     /locus_tag="RTF91_000905"
     CDS             complement(10042..10227)
                     /locus_tag="RTF91_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943803.1"
                     /translation="MIYILEFFKGASLALMLFGALFFFLKFNSFFYLCLGIIPGLLLS
                     LIFVLLIENHGLKSKIS"
     gene            complement(10224..10904)
                     /locus_tag="RTF91_000906"
     CDS             complement(10224..10904)
                     /locus_tag="RTF91_000906"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDZ4943804.1"
                     /translation="MKDLFLFSSLLDASHTFSYFFHIGLVALIAVIVAMMATRSMQLV
                     PRGMQNLGEAFLEGVLSMGRDTMGSEKGARKYLPLVATLGIIVFFSNIIGIIPGFHSP
                     TASLNLTLSLAIIVFVYYHFEGIRVQGFVKYFAHFMGPIKLLAPLMFPIEIVSHLSRV
                     VSLSFRLFGNIKGDDLFLMVILALVPYIAPLPAYVLLTFMAFLQAFIFMILTYVYLAG
                     ATVVEEGH"
     gene            complement(10974..12314)
                     /gene="radA"
                     /locus_tag="RTF91_000907"
     CDS             complement(10974..12314)
                     /gene="radA"
                     /locus_tag="RTF91_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDZ4943805.1"
                     /translation="MAKNKALFECQACGNQQSKWLGKCPSCGVWDSFVELKSEQIKVL
                     KEIAQASMKISEAICIEDVELEHFTRYSTDDDELDLVLGGGLVEGSLVLIGGSPGVGK
                     STLLLKIASNLAKQGKKVLYVSGEESKAQIKLRADRLEANTPNLFLLTELCLENILEE
                     LHKKDYSILIIDSIQTLYSNKITSAAGSITQVREITFELMRVSKAYNIGTFIIGHITK
                     EGSIAGPRVLEHMVDVVLYFEGDATKEIRLLRGFKNRFGGTNEVGIFEMTAKGLISAK
                     DLANRFFTRGKAISGSALGVVMEGSRALVLEVQALVCESSYPKRSATGYEKNRLDMLL
                     ALLERKLEIPLGHYDVFINISGGVKVSETAADLAVVAAIISSFKNRPLSKDSIFIGEL
                     SLNGEIREVFSLDTRLKEAKMQKFKNAIIPSKPLEDMGLKCFVAKELSQVLEWM"
     gene            complement(12314..13180)
                     /gene="ftsY"
                     /locus_tag="RTF91_000908"
     CDS             complement(12314..13180)
                     /gene="ftsY"
                     /locus_tag="RTF91_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDZ4943806.1"
                     /translation="MFDFLKKGLAKTLENIAGVKGENKKITKDLLEEILLEADVSYEI
                     IEEIIYYLPPQNEIKKEDLKRVMGSYFLYEKKETIQEKPFVELILGVNGAGKTTSIAK
                     LAYLYKNQNQKVILGACDTFRAGAIEQLKLWAQKIDVDIVLTAQGHDPSAVAFDTISK
                     AKAKGFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGI
                     LQAKAFNELVKLDGVIITKLDGTAKGGALFSIARELELPIFYIGVGEQMTDLQEFDAN
                     AYLDTLLDPIFE"
     gene            complement(13180..13737)
                     /locus_tag="RTF91_000909"
     CDS             complement(13180..13737)
                     /locus_tag="RTF91_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDZ4943807.1"
                     /translation="MKIRKIFLLAAISCLFVACSNDEEKQQNDTNTNIEASINQSDDV
                     NFKLNLIDGGSILIKKENATLNFNDEDKATLFVFFTTWCTPCIAEIPHLNKLQKKYSN
                     DFNIVGVLLEDKSNDEIEKFIEQHKISYKVANGENNYLLAKALGGVNGIPTMFLYNKH
                     SKLINQYLGLIPEEMLEIDIQKTIL"
     gene            13818..14444
                     /locus_tag="RTF91_000910"
     CDS             13818..14444
                     /locus_tag="RTF91_000910"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDZ4943808.1"
                     /translation="MEKTDFRVLQKIRLLKHTKLNFKQDYKIFKECLKIIKLFKAKNI
                     LIYIPLYYEPNLIKFRHILNKNYKLFVPFMQDKSLKIVKLRLPFIKKRFGVLEPMDSF
                     FKAKIDLAIVPVIGVDKNLKRIGHGQGFYDRFFENLNYKPHIIFVQSIDALSQNNLTQ
                     KHDISGKLYINPYKKYYKKERKNDRITYRTYSRYSRTQYRIFSCKKNQ"
     gene            14365..15918
                     /gene="rny"
                     /locus_tag="RTF91_000911"
     CDS             14365..15918
                     /gene="rny"
                     /locus_tag="RTF91_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HDZ4943809.1"
                     /translation="MIESLIALIAAIVGLSIGYLVAKKINDAKYEIFIEQAKAKAKAI
                     EYEAELILKDAKNSILNAELEVKKKYEEKTHKIQKDFNQKFDALFKKEQKLQQEEEKL
                     KEDKEYLFKSQKHIQNLQSDVDKLKSKYQEKLNDVLKILEHSTGLTQNEAKEIILKKV
                     EENSRKQIAHIVRKYEEEAKNEAKRKANFIIAQATSRFAGEFAAERLINVINIKNDEL
                     KGRIIGKEGRNVKTLEMVLGVDIIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRI
                     QPARIEEIHEKVCKEFDSAILEEGETIVMDLGLNKIHPEIVKLIGKLKYRASYGQNAL
                     AHSLEVAHLAGIIAAECGGDENLARRAGILHDIGKALTHDFEGSHVDLGAELCKRYKE
                     HPVVINAIYAHHGHEEATSIESAAVCAADTLSAARPGARREVLEAFLKRVSELEEIAK
                     SKEGIKNAYAINAGREIRVIANAQLVNDDESVLLAKEIAAEIQEKMQYPGEIKVNVIR
                     ELRTIEYAK"
     gene            15927..16484
                     /locus_tag="RTF91_000912"
     CDS             15927..16484
                     /locus_tag="RTF91_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDZ4943810.1"
                     /translation="MQDMIDTLIKYGYIVLFFYSLGGGMVGILAAGVLSSQGKMDLNL
                     CITLAFIANTIGSTLLFILGKYYKKDIMPYFKKHRRKLALAMMKTKQHGVILLVSQKF
                     IYGLKTFIPIAAGLAKYDFIKFAIINTLASLTWAIILGLAAYTFGYIIEAIFNKLSLY
                     PYAAPLFLLILAGMIWLYLTKFSKK"
     gene            16492..17742
                     /locus_tag="RTF91_000913"
     CDS             16492..17742
                     /locus_tag="RTF91_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HDZ4943811.1"
                     /translation="MEFFFQTFKEFRYLFLSLVVIFIFNVLLEYNNFLDFKNQKHYFI
                     DNALLTHQYTKYNKKNKKYWVLKLQTKNFTFYTTSFKDLNLSKNQLLSLKIITHNIDF
                     KDYLSKNFYAPAYDFEKLKEKEYNPIISYFLNQHKNEKIKEFYGALFFALPISLELRN
                     DVNYYGVAHLIAISGYHIGLLFSLIFFILAPIYSFFQKRYFPYRNLRLDLSILIFTLL
                     LAYAYLIGFVPSFVRSLIMAFWVFYLLCKNIKIINFFTLFCSILLCISLYPKLLFSVG
                     FLFSILGVFYIFLYIHHFASKFNNFINVILLNIWTFFAMVLPVLYFFPLISYQQILGI
                     VLSGIFVIFYPLVLFLHLINYGDFLNLILDEFFKFKIYGTNINIPFWIFISYLIASLI
                     SIRFKYLAFLCIFANFIPFIMIVI"
     gene            complement(17686..18492)
                     /locus_tag="RTF91_000914"
     CDS             complement(17686..18492)
                     /locus_tag="RTF91_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HDZ4943812.1"
                     /translation="MKKFFTILSNLRDKEILNYAAALSFYTILSLIPILFICFSIFTQ
                     ISSFKAYYEKAKQVIFAFLIPTQQDIVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFS
                     GYDFVINRITKNDPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNF
                     FEILPFVIIWGLFFISYSSSIHKGTLKSLTLVSFGAGAIWYIGKNLFVYYVVYNKTYA
                     SVYGSFSTILFFFIWIYISWIIYLFGLKLYYFLNHNHNEGNKIRKNTKKS"
     gene            complement(18496..19878)
                     /locus_tag="RTF91_000915"
     CDS             complement(18496..19878)
                     /locus_tag="RTF91_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDZ4943813.1"
                     /translation="MRKEFEQYFKQFLGEENAYFDEIHKRAYSYDATKKHYLPDGVLF
                     PRNEEDIAQILKFCNENNIIVIPRGSGSGFTGGALAVNGGVVLTFEKHMNKILEIDLE
                     NLVAVVQPGVINIHLQKEAAKYGLFYPPDPASMEYSSLGGNVSENAGGMRAAKYGITK
                     DYVMALRAVLPNGEIIRAGKRTIKDVAGYNLAGILIASEGSLAVLSELTLKLIPLPKF
                     KKTAFAIFPSVKSAMNAVYKSLASGVSPVSMEFLDNLSIRAVESKFNKGLPVEAGAIL
                     IADVDGNVKEAIDEDLKNLEHYFLEAGASEFKIAKDEQEATNIWFARRNCSQSIAMYG
                     SLKLNEDITVPRSKLPALLEGIDEISKKYGFKIPCFGHTGDGNVHTNVMVPDKNDEEQ
                     VKKGYKAVEEVFELTVKLGGTLSGEHGIGLSKAPFMNLAFSEAEMNLMRNIKKAFDPN
                     NILNPFKMGL"
     gene            complement(19883..20608)
                     /locus_tag="RTF91_000916"
     CDS             complement(19883..20608)
                     /locus_tag="RTF91_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasminogen-binding N-terminal domain-containing
                     protein"
                     /protein_id="HDZ4943814.1"
                     /translation="MFKTIVCFLALNLSLFAVEFDLKPIKSELIKVDDIYGYIKDSAD
                     IKLYSSGVVIQRFKNSQSIIARASVIAKKDGLAKLQFSVFLALKQDALPLPNVLPEVG
                     DEVVLNFLYDRGLVIAPDEQTYNQLVREFPQIYFTHIDIFGAQLIRTATLSPKRSDFR
                     QFCDDNAVGILVVALENQAEVVDCQDFSKLYEVSISKPTSVQVPFYSRIGGYKSNFFD
                     FNSQKIGNYYRYYNALINLPKVQ"
BASE COUNT         7481 a         3443 c         2841 g         6934 t
ORIGIN      
        1 ttaaaaactc atatgccaat cattgcttgt attgccgctg ctattatttc agcaatgttt
       61 ttatttaaag gtttaaataa tgttagcact ttggatattt tacaaaattt ttggattatt
      121 ggaattatcg gaactataag ttatgttgta acatttgcta tagttaaaat cgttaaaaaa
      181 acagagctca ataaaactac tgatagaatt ttctcatggt ttcaaatatt tacagcctct
      241 agctttgcat tttcacatgg agccaatgac atagccaatg ctattggtcc ttttgcagcc
      301 atcttagatg tcttaaaaaa tggtacaatc aacgcaactt ctcctgtacc ttttgctgct
      361 ttagctatgt ttggagtcgc tttagttgca ggactttggt ttttaggtaa agaagttatt
      421 accacagtag gttcaaaact tgcaaccata cgccctacta ctggattttc tgcagaattg
      481 ggagcaagta tagttatact cttagcaaca caatttggaa ttccggttag ttccactcat
      541 atactcatag gtgctgtttt aggcatagga gtatataata aaaacgcaaa ttggattatg
      601 atgaaaccta tagggttggc ttggattatc actttacctg ctgctggtat tatggcagca
      661 cttgtatttt tagggtttaa attatcttta ggaatttaaa caaaacttat tttcctaaaa
      721 tattttttcc caagattata tgcattttaa cctttccaaa aagcttatcg ttagagtaaa
      781 gggagctttt tggagcgaaa atttcttcat tctcatcaaa aagaactaaa ttagcttctt
      841 tgccaacttc tataacccca ctatttaaat ctaaaaattt actaggattt ttactcgtaa
      901 atttacaaag ctcttgccaa gttaaaaatc cttctttaac taaaaaagta taacaaagac
      961 ttataaattc gcacatacta tgaattccaa aggctgcttc atcaaaagct aaatccttta
     1021 aagaaattga ttttgcactg tgtaaagaag ttaaaaagct aattttttct tcttttaaag
     1081 cttgctttaa agctaaaaca tcttctttac ttcttaaagg tggcataagt tttgcagcgg
     1141 tattaaagtc ttcacaagca gtatcatctt tgataagatg atgaatactt acaagtttta
     1201 aatccttatc atctaataac atcaaagaat ctttcaaact taaaagatca aaaataactt
     1261 tatttttata aaatttagcc agttccttca ttttagctac ttgactggtt tcagcaattt
     1321 tactcatacc tataagcccc aattcaaaac tcatttcaca atcattcatc accccattat
     1381 cgtcaaaatc cttatcatga caacgtacaa aaagtgggga atctttcata aaagcatatt
     1441 gtgaactcac ttttaaggta ttagcatcta aagaactatc aagctctaaa gcacaagctc
     1501 ccttatttaa aagagtagct aaatttttaa gcttgccatt tgcatcttta acacgcacac
     1561 ttggaaaaat ttgcattttt ctttgagcta aattttgtaa aaataaagca aaactttctt
     1621 catcaaaatc catacaatca cgtaaaacta taccagaaac tcctcctttt aaacactcat
     1681 tttccaaaag ttctaaatta gccaaagaaa atttatcatt ttttaaactc acacacaaat
     1741 ctacaaaaga tggaagtaaa gtcatacctt tagcatctaa aatttcttca tcttgtaaat
     1801 taaaaccaat attggtgatt tttccttctt taatctctat atcttgcaaa gaatttccat
     1861 aaatttttgc atttttaatt atcatgattt ttccttaatc attttgcttt aataaatttt
     1921 gcgttgcttc ttgcacactt ttacccttaa aaattgccac cacctcattt acaataggtg
     1981 tataaattcc cttagttttt gccaattttt ctatagcata agctgttttt acaccttctg
     2041 ctacttcatt aagttcagtt aaaatactgt ctaatttttg attttgtgcc agctttaaac
     2101 ccactctata atttcttgat aagacgctag ttgcagttaa aaataaatcc cctgctccac
     2161 ttaatcctaa aaaagtttct tcttttgcat caaaaaattt accaaaacga tgcatttcta
     2221 tgagtcctct tgaaatcaaa gctgctcttg cattattacc taattttaaa ccatcactaa
     2281 tcccgcttgc aatggctaaa acattcttat aagcaccaca aatttcagca ccacgcacat
     2341 catcatcaat ataagttttg ataaaatcag gaaaaaaact tgcaaatttt ttacaaagat
     2401 cttgatttac cccgctgatc atcaaagctg tagggagttt ttgcatcact tcagctgcaa
     2461 aagaaggacc acttaaaaca caaaaatttt cctttgatac aaaatctaaa aaaatctcat
     2521 ctaaaaattg acaactttga tcttctatac cttttgaagc aattaaaatt ttttgtcctt
     2581 tattgatgaa attttgttta agccatgcac gcattccttg agaacttaaa gcaaaaacaa
     2641 gatattcaca ttttaaagct tcttctatac taacaaaatc ttctaaatca cgctgatgta
     2701 aagaactaat aaaacaagta tgattttctt ttaaagctaa atgtaaagca ctaccccatt
     2761 ttccagcacc aataaccgct atatccatca actaagcttt gcttttaaaa tttcattcac
     2821 ttttgcagga ttaaaagctc ctttgccttc tttcattgct tgtcctacaa agaatccaaa
     2881 aagcttgtct ttaccacttt tatattctgc aaccttatca gcatttgcat ttaaaatttg
     2941 ctcaatcact gcttcaatgg ctgaatcatc acttacttgc ttaagtccta gtttttctat
     3001 ggtttcatca acagtcgctg ttgtattttc aaaaacaaaa gccaaaacat ctttagctgc
     3061 ttttgcactg atagtaccat cttctatacg cttgattaaa tctccaagtt tttgtgcatc
     3121 tacaggagaa ttttctatag tcaactctcc ttttaaaaga cccataagct cagtatttaa
     3181 ccaatttaca caaaatttag gatttaaatt ttgagaaata agactttcaa aaaaacgact
     3241 catttcaaga gaactgatta aaacctcagc atcaccttct tttataccaa gctcacttat
     3301 aaagcgtgct tttttctcat caggaagttc aggaatttta atatctaaaa acttatcttt
     3361 taataaaaca ggcaataaat cagggtcagg aaaatagcga tattctgcag cttcttcttt
     3421 accgcgcata ctttttgtaa tcaaatttgt tgtatcaaag agtctagttt cttgaactac
     3481 ttcttgttca taacttccat cttcccaagc ctcactttgt ctttttatct catattctat
     3541 agctttttgg ataaaacgaa aagaattaag gtttttaatt tctactctag tataaagctt
     3601 cgtatcaccc ttaggtctta tacttacatt tgcatcacat ctaaaacttc cttcttgcat
     3661 atttgcatct gaaatatcta aaaagcgtat aatagaatga agttttttaa gataagccac
     3721 cgcctcatca ctacttctaa gctcgggttc actaacgatt tctagtaaag gagttcctgc
     3781 gcgatttaag tctactttag aaaaattact ttcatggata tttttgcctg catcttcttc
     3841 caaatgagct cttgtaatac ctatacgttt attttcacca tttacattga taaaaagttc
     3901 acccttttct actataggaa tgtcaaactg tgaaatttga taagccttag gtaaatctgg
     3961 ataaaaataa ttcttacggt taaaaacact ttttttatta attgttgcat ttacagcctt
     4021 tccaaaagct atagcttttt ttacagcttc ttcatttaaa accggtaagg ctcctggcaa
     4081 agctaaacaa gtgggacaaa cattagtatt tggagcttct ccaaaagaag ttgcacatga
     4141 acaaaagatt tttgttttgg tatttaattg agtatgaact tcaagaccta taactacttc
     4201 aaacataaaa tttccttgaa tttttaaatg ctttatttta tctttttttc ttttagaaag
     4261 gctttaaata ttaactttaa atgctataat tcttaggcaa tttatattta taaggagtta
     4321 aaatgccatt actagatagt tttaaagttg accatactaa aatgtcagct cctgctgtgc
     4381 gtttagctaa agttatgaaa acgcctaagg gtgatgatat tagcgtattt gatttgcgtt
     4441 tttgcacgcc aaataaagac attatgagcg aaaaaggtac tcatacttta gagcatttat
     4501 ttgcaggatt tatgagagat catttaaatt caaattcggt tgaaattatt gatatttctc
     4561 ctatgggttg tcgtacgggt ttttatatga gcttgattgg aaaacctaat gaaaaaagca
     4621 ttgcaaaggc ttgggaggaa gctatgaaag atgttttaaa tgtgagtgat caaagtaaaa
     4681 ttcctgaact taatatctat caatgtggaa cttgcgcaat gcattcttta gatgaagcca
     4741 aacaaatcgc tcaaaaggtt ttaaatttag gtattggtgt aatgagtaac gaagaattaa
     4801 aacttgaaaa tgcttaaaaa aatctttgat tttctaatta ttaagcttta attaatatat
     4861 ttttatatat gattttgaaa ttttattatt tttaaggaga gaaaatgaaa ctgatgtgcg
     4921 agatgtgtag tatctagtgc gtcctttggc ttgacattat gtttccaaag gtcaaaaaga
     4981 tggataagga gatataatgt gtaagaaagt caaaaagttt atttttttca aaatactcat
     5041 ttaaaatctt aagcttacaa aaatttaact caaagtatct tcttattctt aattttagtt
     5101 taaggagcaa aaatgaattt acctatactt gatttacaag tttatgaaaa agacaaaagt
     5161 acttttctta aaaacttaag agaaattact tcaaaaatag gtttttttta tcttatcaat
     5221 tccggcatag ataaaaatct aaatgaaaaa ttattcaaac ttggcaaaga tttttttaat
     5281 cttcccagaa gttctaaaga actcatttct atggtgcatt ctccacagtt tagaggttat
     5341 acaagtgaag gttctgaata cacagcagga actaaagact acagagaaca acttgatata
     5401 ggcacagaaa gaaacgcttt taaatgggat ttaaattcgc ccctatggca aagattagaa
     5461 ggtcctaatc tttggcctaa tgaaattcca gaacttaaag aaactttctt agcttggcat
     5521 gaacagacaa aaaaagcttg tttaaaactt ttaaaagcat ttgcccaatg ccttaatcta
     5581 cctagcaatg cttttgataa actttatgga aaaaattctt acgaacattg caaaatcata
     5641 cattatccaa aaagctcaaa aaatatcact caaggcgtgg gttcacataa agatggagga
     5701 ctcataactt ttgttttcca agaaaagcaa agcgggcttg aagcctttgt agataataaa
     5761 tggtttagca tacctccact tgaaaatagc gttgtagtta atataggaga atttttagaa
     5821 ctagctacca atggctattt aaaggctact atacaccgag tgaatttaag tccaaaagaa
     5881 cgctttagca tagcttattt tcttggagtg cagcttgata aggatatacc tatttttaaa
     5941 ttaaacccag agtttgctaa agaaagcaaa ggtgtggata ctgatcctaa aaatccgctt
     6001 ttaagaaatg ttgcaagtaa ttattttaaa agaatgatac gctcacatcc tgatgtagca
     6061 agcatttatc atagcgactt gatagaaaaa tttaaatttg cataaggaga aaaaatgact
     6121 ttatttgcta aagctttttg cgtcgctact ctttttactg gttttgcatg ggcaaatgaa
     6181 gaactaaaag ttggctcttc tataacacct catgcggata ttttaagatt tataaaatct
     6241 gcacttcaaa aacaaggtta tgatttaaag atttatgaat ttaacgatgg agtgattcct
     6301 aatgtaatgg ttgaaaatgg tgagttggat gctaattatt ttcaacatga gccctattta
     6361 aaagaattca accaaagaca aggcactcat cttgtaaaag ttgctagtat ccatatagaa
     6421 cctatggcag tgtattctaa aaaacataaa gaatttaatc ccaaagaagg agaaagcatt
     6481 tctataccca ataatcctac aaatgaaagt cgtgctttac gtattgtagc aagcaaagga
     6541 attatagaag ttaaagataa tgagctcatc actcctttag atatcactaa aaatcctaaa
     6601 aagcttaaat ttgtagagct aaaagacgct caacttacaa gaagcttaga tgatgtggat
     6661 tattctcttg ttaatagcaa ttttgctatt ttagcaggct taaatcctgt aaaagatggg
     6721 ctttatacag aaagtaagta tagtaaatat ggcaatatca ttgctgttaa agaaggtaat
     6781 gaaaatcttc ctaaaatcaa agccttagta aaagccttgc aaagcaatga agttaaaaaa
     6841 tttatagaag aaaaatatca gggtgcttta atccctacat tttaaggaga caaatatgaa
     6901 aaattcaatc atttcttacc caagaatagg tgcaaataga gagttgaaat ttgctattga
     6961 aaaatatttt aaaaaccaaa gttcaaaaga ggaactttta aagagtgcta agaatttaag
     7021 aattagacac tggcaagaaa ttcaaaaagc tgaaattgat tttatcccta gcaatgactt
     7081 ttcattttat gacaatgtct tagatacggc cgtgcttttt aatataatcc atactaaata
     7141 taaaaattta aatttagaat ctttagatga atactttgct caaagtcgtg gttatcaagg
     7201 taaaaacgga gatgttagag ctttagcaat gaaaaaatgg tttaatacaa attatcatta
     7261 tctagtaccc gaatgtgata atgcagatat tatagcttta acaggagata aaattttcaa
     7321 agaatacctt gaagctaaag aacttggtat agaaagtaaa cctgttttaa taggcatttt
     7381 cacactattt aaactcattg cttttaaaga caaacaaact caaaaacttg ccaaagaaaa
     7441 gcttttaaac gcctatatag atctttttaa taaactaaat gaactcaaag tacaatggtt
     7501 tgaacttgat gaaccttatt tggtttatga tttaagcaaa gaagatattg ttttgtttga
     7561 agaattgtat caagaacttt taaaacacaa aaaagatctt aaaattttac ttcaaagcta
     7621 ttttggagat ttaagagatg tttatcctaa acttttagag agtaaatttg atgctttggg
     7681 gcttgatttt gtcgaaggta aacaaagctt agctttaatt caacaatacg gctttactaa
     7741 agataaaata ctttttgcag gcattgtaaa tggtaaaaac atctacgcta atgactatgc
     7801 taaaagctta aagcttatta aagaacttca aaaatacaca caaaatatca ttttaaacac
     7861 ttcttgttca cttttacatg taccttatag tactgaattt gaaagcaaat tagatccgag
     7921 ctatcttaga ctttttgctt ttgccaaaga aaaacttaaa gaacttaaag atttaaaaga
     7981 aatcttaaat tctagcgaag aaaatccact ttttagcacc aatcaagagc tttttaaaaa
     8041 tattccagag cgtttagatg aaaaagtcaa agcaagactt aaggctttaa aaaaagaaga
     8101 ttttatcaga acacctagtt ttaaagaacg cgctttaatc caaaaagaat ttttaaaact
     8161 gcctatctta ccaactacaa ccataggatc tttccctcaa agtgctgatg taagatctaa
     8221 tcgccttgcc tttaaacaag aaaaaatttc agctcaaaat tacactgaat tcaatcaaca
     8281 aaagattaaa gaatgcatac aaattcaaga agaaatagga cttgatgttt tagtacatgg
     8341 agaatttgaa agaaatgata tggtggaata ttttggagaa aatttaaaag gctttttatt
     8401 cactcaaaat ggctgggtgc aaagctatgg aacaagatgc gttaaacccc ctgtgatttg
     8461 gggagatgta tcacgcacaa agcctatcac cttggcttgg tctaaattcg cacaaagtct
     8521 aagtcaaaaa atcgtaaaag gcatgctaac tggacctgta accatactta attggtcttt
     8581 tccaagagaa gacattagtc taaaagaaag tactcaacaa attgccttag ccataagaga
     8641 tgaagtacta gatcttgaaa atgcaggtat aaaaatcata caaattgatg aagcggctct
     8701 acgtgaaaaa ttacctttaa gaaaaagcga ttggcatgat gagtatttgg attgggctat
     8761 tcctgctttt aatcttgtgc atagcggagt aaaagccaaa actcaaattc atactcatat
     8821 gtgttatagc gaatttagcg atattttaaa agaaattgat gctatggatg ctgatgtgat
     8881 ttcttttgag gcttcaagat caaacttaag tcttttagat accttaaaag ccattcattt
     8941 taaaactgaa gttggaccag ggatttatga tatacatagc cctagagttc caagcgtaga
     9001 agaactaagt ttaactatag aaaaaatttt aaacaaatta cctaaggaac aaatttggat
     9061 caatccagac tgcgggctta aaacaagagc ttatgaagaa gtcatagcct ctcttaaaaa
     9121 tttagtcaca gccacaaaaa aaatacgaga acaattataa ggagttttta tgcgtagttt
     9181 ttcttttgaa gtttttccac caagaaagga tgaaagcatt aaaaatctta atactatctt
     9241 agatgattta gggcaattaa gccctaattt tatcagtgta acctttggtg cagcaggctc
     9301 tatcaattca caaaatactt tagaagttgc aagtttaatt caagaagaat acaaaattcc
     9361 tagcatagtg catttacctt gcatccattc taataaagaa aaaatcgctc acatacttca
     9421 aagatgtaaa gaaaaaaaaa ttaaaaaaat tcttgcccta agaggtgatg tatgtgagaa
     9481 tttacaaaga agtaaagatt tttcttatgc aagtgactta atctctttta taaaaaagca
     9541 agaagacttt gaaatttatg ccgcatgtta tcctgaaaaa cacaatgaat ctaaaaattt
     9601 cattgaagat atacaacatc ttaaaactaa agtaaatgtg ggaacaaata aactcattac
     9661 ccagcttttt tataataatg aagattttta taattttaaa caaaattgcg ctttagcgga
     9721 tattaatata cctatttatg caggcattat gcctattact aacaaaagac aggttttaaa
     9781 aatttcccaa ctttgcggag ctaaaatacc tcctaaattt gttaaaattt tagaaaaata
     9841 tgaaaataat gctttagctt tagaagatgc aggaatagct tatgcttgcg atcaaatcgt
     9901 ggatctaatt acaagtggag tagatgggat tcatctttat acaatgaata aatccaaagc
     9961 agctattaaa atttatgaag ctataaaata tctattaaaa gaagaacttc gcacttaaag
    10021 ataagctatt ttgcttttat cttaacttat tttacttttt aacccgtgat tttctataag
    10081 caaaacaaaa atcaaagata aaagcaaacc cggtataata cccaaacaaa gatagaaaaa
    10141 agaattaaat tttaaaaaaa agaaaagtgc accaaaaagc attaaagcta aggacgcacc
    10201 tttaaaaaat tctaaaatat agatcaatga ccttcctcaa caacagttgc acccgctaaa
    10261 tacacataag ttaaaatcat gaaaataaaa gcttgcaaaa atgccataaa agttaaaagc
    10321 acataagcag gaagtggagc aatataagga acaagagcca aaattaccat taaaaataaa
    10381 tcatcgcctt taatatttcc aaaaagacga aaagataaag aaaccacacg agaaagatga
    10441 gaaactatct ctataggaaa catcaaagga gctaaaagtt taataggtcc cataaagtga
    10501 gcaaaatact ttacaaaacc ttgcactcta ataccttcaa aatgataata cacaaaaact
    10561 ataatagcta aagacaaggt taaatttaaa cttgcagttg gagagtgaaa accaggtatt
    10621 atacctataa tattactaaa aaacactata atccctaaag ttgcaaccaa aggaagatat
    10681 tttcttgcgc ctttttcgct tcccatagta tctctaccca tagataaaac tccctctaaa
    10741 aaagcctcac ctaaattttg cataccgcgt ggaacaagct gcatagaacg agtagccatc
    10801 atagctacta taacagcaat taaggccacc aaacctatgt gaaaaaaata agaaaaagtg
    10861 tgacttgcat caagtaaaga gctaaataaa aataaatctt tcatggtttc ctcaaaaaat
    10921 tttattataa actttaaact ttagcaaaat cttacttata ttttaatgaa aatttacatc
    10981 cattctaaaa cttgtgaaag ttctttagca acaaagcact taagtcccat atcttctaaa
    11041 ggcttagaag gaataatagc atttttaaat ttttgcattt tggcctcttt taaacgcgta
    11101 tcaaggctaa aaacctctct aatttctcca tttaaactaa gctctcctat aaaaatacta
    11161 tctttactta aagggcgatt tttaaaactt gaaataatag ccgcaaccac agccaaatca
    11221 gcagcagttt cacttacttt cactcctcca ctaatattta taaatacatc ataatgccct
    11281 aaaggaattt caagttttct ttcaagcaga gctaaaagca tatctaaacg atttttttca
    11341 taacctgtgg cactacgttt tggataagaa ctttcacaca ctaaagcttg cacttccaaa
    11401 accaaagcac gggatccttc cattacaact cctagagcac ttcctgaaat agcctttcca
    11461 cgggtaaaaa aacgattcgc caaatctttt gcacttatca aacccttagc agtcatttca
    11521 aaaataccca cttcatttgt tccaccaaag cgatttttaa aaccccttaa aagtctaatc
    11581 tctttagttg catctccttc aaaataaagc accacatcta ccatatgctc aagaacccta
    11641 ggtcctgcta tagaaccttc tttagtaata tgccctatga taaaagtacc gatattataa
    11701 gccttgctaa cacgcataag ctcaaaagta atctcacgca cttgagtgat gcttccggct
    11761 gctgaagtaa tcttatttga atataaagtt tgtatagaat caataataag aatactataa
    11821 tcctttttat gtaattcctc taaaatattt tcaagacaaa gttcagtaag taaaaataaa
    11881 tttggcgtgt tagcctcaag acgatcagct cttagtttaa tttgagcctt gctttcttct
    11941 ccgcttacat aaagtacttt tttaccttgt ttagctaaat ttgaagcaat ttttagtaaa
    12001 agcgtagatt ttcccacgcc tggacttccg cctataagca ctaaagagcc ttcaaccaaa
    12061 cctccaccta aaaccaaatc aagttcatca tcatctgtgc tatatcttgt aaaatgttcc
    12121 aactccacat cttcaataca gatagcttcg cttattttca tactagcttg tgcaatctct
    12181 tttaaaactt taatttgttc ggattttaac tccacaaaac tatcccaaac tccacaacta
    12241 ggacattttc caagccattt actttgttga tttccgcaag cttgacattc aaaaagtgct
    12301 ttattttttg ccattattca aaaataggat ctaataaagt atctaaataa gcatttgcat
    12361 cgaattcttg caaatctgtc atttgctcac ctacacctat ataaaaaata ggaagttcaa
    12421 gctcccttgc tatgctaaaa agcgcgccac ccttagccgt tccatcaagc tttgtaataa
    12481 tcacaccatc aagctttaca agttcattaa aagctttggc ttgtaaaatt ccagcattcc
    12541 cttgcgttcc atctaaaact aaaatttttc tatgcggtgc accttctaaa gctttgtttg
    12601 aaattcttac aatcttttca agttcatgag ctaaattttt ttgattttgc aaacgtcctg
    12661 ccgtatcgat aataacccta tcaaaaccct ttgctttggc tttagaaata gtatcaaaag
    12721 caaccgcaga aggatcatgt ccttgtgcgg ttaaaactat atctacatca attttttgcg
    12781 cccaaagttt taattgttca atcgcacctg ctctaaaagt atcacacgct cctaagatca
    12841 ctttttgatt ttgatttttg tatagataag caagcttagc aatacttgtt gtttttcctg
    12901 ctccatttac tcctaaaata agctctacaa aaggtttttc ttggatggtt tctttctttt
    12961 cgtaaagaaa ataagaaccc ataacacgtt ttaaatcttc tttttttatc tcattttgtg
    13021 gtggcagata ataaatgatc tcttcaatta tttcataact tacatctgct tcaagtaaaa
    13081 tttcttcaag caaatcttta gttatttttt tattctctcc tttaactcca gcaatatttt
    13141 caagagtttt tgcaagtcct ttttttaaaa aatcaaacat taaagtatag tcttttgtat
    13201 atcaatttct agcatttctt cagggataag tcctaaatat tgattaatca atttagaatg
    13261 cttattataa agaaacatgg taggaattcc atttactcca cctaaagctt tagctaaaag
    13321 atagttattt tcaccattgg cgactttata ggatatttta tgttgttcta taaatttttc
    13381 aatctcatca ttggatttat cttctaataa aaccccaact atattaaaat cgttgctata
    13441 ctttttttgt aacttgttaa gatgaggaat ttcagcgata caaggggtac accaagtggt
    13501 aaaaaataca aataaagttg ccttatcttc atcattgaaa tttaaagttg cattttcttt
    13561 tttgattaaa attgatccgc catcaatcaa attaagttta aaatttacat catcactttg
    13621 gtttatgctt gcttcaatgt ttgtatttgt atcattttgt tgcttttctt catcattgct
    13681 acaagcaaca aacaaacaag atattgccgc taataaaaat atttttctaa tcttcattat
    13741 ttatagatcc tttattcttt ataaaaatgc taaaattata acatacataa gataatattt
    13801 ttttaaaggc atattatatg gaaaaaacag attttagggt attacaaaaa atacgccttt
    13861 taaaacatac aaaactaaat ttcaaacaag attacaaaat atttaaagaa tgtcttaaaa
    13921 taataaaact atttaaagcc aaaaatattt taatttatat tcctttgtat tatgaaccta
    13981 atttgataaa atttcgtcat attcttaata aaaattacaa actttttgtt ccatttatgc
    14041 aagataaaag tttaaaaatt gtaaaattaa gattgccctt tattaaaaaa aggtttgggg
    14101 ttttagagcc tatggattct ttttttaaag caaaaattga tttagctatt gtacctgtaa
    14161 ttggtgtcga taaaaatcta aaaagaatag gacatgggca gggtttttat gatagatttt
    14221 ttgaaaattt aaattacaaa cctcatataa tatttgtcca aagtatagat gctttaagtc
    14281 aaaataattt aacacaaaag catgatattt caggaaaatt atacataaac ccttataaaa
    14341 aatattacaa gaaagaaaga aaaaatgata gaatcactta tcgcacttat agccgctata
    14401 gtcggactca gtataggata tttagttgca aaaaaaatca atgatgccaa atatgaaatt
    14461 ttcatagagc aagctaaagc taaagctaaa gctatagaat acgaagcaga gcttatttta
    14521 aaagatgcaa aaaattcaat tcttaatgca gaattagagg ttaaaaaaaa atacgaagaa
    14581 aaaactcata aaatccaaaa agattttaat caaaaatttg atgctctttt taaaaaagag
    14641 caaaaacttc agcaagaaga agaaaaacta aaagaggata aagaatatct ttttaaatca
    14701 caaaaacaca ttcaaaactt gcaatctgat gttgataaat taaaaagtaa atatcaagaa
    14761 aagcttaatg atgttttaaa aattttagag cattctacag gacttacaca aaatgaagcc
    14821 aaagagatca ttcttaaaaa agtagaagaa aattctcgta aacaaattgc acatatagta
    14881 agaaaatacg aagaagaagc aaaaaatgaa gccaaaagaa aagctaattt tatcattgca
    14941 caagctactt ctcgttttgc tggtgaattt gcagccgaaa gacttatcaa tgttattaac
    15001 attaaaaacg atgaacttaa aggacgtatc attggtaagg aagggcgaaa tgttaaaacc
    15061 ttagaaatgg ttttaggcgt tgatattatc atagatgata ctccaggtgc tattatagta
    15121 agttgtttta atctctatcg ccgtgccatt gcaactaaag ttatagagct tttagttgaa
    15181 gatggcagaa ttcagcctgc acgcatagaa gaaattcacg aaaaagtttg taaagaattt
    15241 gacagcgcta ttttagaaga aggtgaaact atagttatgg atctgggttt aaataaaata
    15301 caccctgaaa ttgtaaaact cataggaaaa ctcaaatacc gcgcaagcta cggacaaaat
    15361 gctctagcgc actctttaga agtagctcac cttgcaggaa tcattgctgc tgaatgtggt
    15421 ggagatgaga atttagcacg ccgtgcggga attttgcacg atatagggaa agcattaact
    15481 cacgattttg aaggatctca tgtagattta ggtgctgaac tttgtaagcg ctacaaagaa
    15541 caccctgttg taattaacgc tatttatgca caccatggac acgaagaagc cacaagcata
    15601 gaatcagctg ctgtttgtgc agcagatacc ttaagcgctg caagacctgg ggctagaaga
    15661 gaagtattag aagctttctt aaaaagagtt agcgagttag aagaaatcgc taaaagcaaa
    15721 gagggaatta aaaatgccta tgcaatcaat gctgggagag aaattcgcgt catagccaat
    15781 gctcagcttg ttaatgatga cgaaagtgta cttttagcta aagaaatagc ggctgaaatt
    15841 caagaaaaaa tgcaatatcc tggtgaaatt aaagtcaatg ttatacgcga attaagaact
    15901 atagaatacg ctaaataagg tttattatgc aagatatgat tgatacttta ataaaatatg
    15961 gctatattgt tttatttttt tactctttag ggggtggaat ggttggaatt ttagccgcgg
    16021 gagttttaag ctctcaagga aaaatggatc ttaatctttg cattactctt gcttttatcg
    16081 ccaatactat aggttctact ctacttttta tacttggaaa atactataaa aaagacatta
    16141 tgccttattt taaaaaacac cgacgcaaat tagcccttgc tatgatgaag actaaacaac
    16201 acggagttat tttgcttgtg agtcaaaaat ttatttacgg tttaaaaact ttcatcccta
    16261 tagctgcagg tttagcaaaa tatgatttta taaaatttgc tattatcaat actctagcca
    16321 gtttaacatg ggcaattatt ctaggattgg ccgcttatac ttttggatat attattgaag
    16381 caatttttaa taaacttagt ctatatcctt atgccgcacc tttatttttg ttaattttag
    16441 ctggaatgat ttggctttat ttaactaaat tttccaaaaa ataatgtcct tatggaattc
    16501 ttttttcaaa cttttaaaga attccgttat ttgtttttat ctcttgttgt catttttatt
    16561 tttaacgttc tcttagaata taataatttt ttggacttta aaaaccaaaa acattatttt
    16621 atagataatg ctctattaac acaccaatac acaaaataca ataaaaaaaa taaaaaatat
    16681 tgggttttaa aattacaaac taaaaacttt actttttata ctacaagttt taaagatcta
    16741 aatttaagca aaaatcaact tttaagtctt aaaattatca ctcataatat cgattttaaa
    16801 gactatctta gcaaaaattt ttatgcacct gcttatgatt ttgaaaaatt aaaagaaaaa
    16861 gagtacaatc caattatatc ttatttctta aatcaacata aaaatgagaa aattaaagaa
    16921 ttttatggtg ctttattttt tgcactgcct atatctttag agcttagaaa tgatgtaaat
    16981 tactacggtg ttgcacatct tatagcaatt agtggttatc atataggctt acttttcagt
    17041 ttaattttct ttattttagc tccaatttat agttttttcc aaaaaagata ttttccttat
    17101 agaaatttac gcttagattt aagtatttta atttttacat tactcttagc ctatgcttat
    17161 ttaataggat ttgttccttc atttgtacgc tctttgatta tggctttttg ggttttttat
    17221 ttactatgta aaaatataaa aattattaat ttctttacac ttttttgcag tattttattg
    17281 tgtatttctc tttatcctaa acttttattt agtgttggat ttttattttc tattttgggt
    17341 gttttttata tttttttata tatacatcat tttgcaagca aatttaacaa ttttataaat
    17401 gtcattttac ttaatatttg gacttttttt gctatggttt tacctgtact ttattttttt
    17461 ccacttataa gctatcagca aattttaggt attgttttga gcggaatttt tgtaatattt
    17521 tatcctttag tattgttttt gcatcttata aactatggag attttctaaa tcttatttta
    17581 gatgaatttt ttaaatttaa aatttatgga acaaatatca atatcccatt ttggattttt
    17641 ataagctatc tcatcgcttc tttaatctct atacggttta aatatctagc ttttctttgt
    17701 atttttgcga attttattcc cttcattatg attgtgattt aaaaaataat agagcttaag
    17761 tccaaaaaga taaataatcc aagaaatata aatccaaata aaaaagaata aaatagtaga
    17821 aaaagatcca taaacactag catatgtttt attatatacc acataatata caaataaatt
    17881 ttttcctata taccaaatag caccggctcc aaaagatact aaagttaaac ttttaagagt
    17941 tcccttatga atagaacttg aataagatat aaaaaataaa ccccaaataa tcacaaaggg
    18001 taaaatttca aaaaaattaa aacctatttt ataatcatct aacgtttgtt gaataaaacc
    18061 tgaaatataa aagctaagtc caagccccaa aggaacaaga gttaaaaggg tccaataaga
    18121 actaatactt tgccaaagtc ctttaggatc atttttagta atacgattaa ttacaaaatc
    18181 ataacccgaa aaaaaagcta aagatgtaaa agccatagca ataagtccta caatacccaa
    18241 atttacgcta ttttttaaaa aagtatcaat ataagtagca acaatatctt gttgtgttgg
    18301 tattaaaaaa gcaaaaatta cttgcttagc tttttcataa taagctttaa agctagaaat
    18361 ttgtgtaaaa atagaaaaac atataaataa aataggtatc aaagataata tagtataaaa
    18421 actaagtgct gctgcataat ttaaaatttc tttatcgcgc aaatttgaca aaatagtaaa
    18481 aaattttttc accttttaaa gtcccatttt aaaaggattg agtatattgt ttggatcaaa
    18541 agctttttta atatttctca ttaaattcat ttcagcctca gaaaaagcta aattcataaa
    18601 aggtgcttta gaaagtccta taccatgttc tccacttaaa gttcctccaa gtttaactgt
    18661 taattcaaaa acttcctcta cagctttata accttttttt acttgttctt catcattttt
    18721 atcaggaacc ataacattag tatgtacatt tccatctcct gtatgaccaa aacaaggaat
    18781 tttaaagcca tatttttttg aaatttcatc tataccttca agcaaagctg gtagcttaga
    18841 acgcggaact gtaatatctt cattaagctt taaacttcca tacatagcaa tgctttgaga
    18901 acaatttctt ctagcaaacc aaatatttgt agcttcttgc tcatcttttg ctattttaaa
    18961 ttcactagcc ccagcttcta aaaaataatg ttctaaattt ttcaaatcct catcaatggc
    19021 ttctttaaca ttaccatcta catcagcaat caaaatggca cccgcttcta caggcaaacc
    19081 tttattaaat ttactctcaa ccgccctaat actaagatta tctaaaaact ccatagatac
    19141 aggacttaca ccactagcaa gacttttata aaccgcattc atagcacttt ttacacttgg
    19201 gaaaatagca aaagcggttt ttttaaattt aggcaaaggt atcaatttta aagtaagctc
    19261 acttaaaacc gctaaagaac cttcactagc aatcaaaatt cctgccaaat tataacctgc
    19321 tacatcttta atagtacgtt ttcccgcacg aatgatttct ccattaggca aaacagctct
    19381 taaagccatc acataatctt ttgtaatacc gtatttagct gctctcatgc caccagcatt
    19441 ttcgcttaca ttgcccccta agctagaata ctccatacta gcaggatcag gagggtaaaa
    19501 aagaccgtat ttagctgctt ctttttgtaa atgtatatta ataaccccag gttgcacaac
    19561 agccactaaa ttttcaagat caatttctaa aattttattc atatgctttt caaaagtaag
    19621 cactacccca ccattaacag ctaaagctcc tcctgtaaaa ccggatcctg aacctcgcgg
    19681 tatgactatg atattatttt cattgcaaaa ttttaaaatt tgagcaatat cttcttcatt
    19741 tcttggaaag aggactccat cgggcaaata atgctttttt gtcgcatcat agctataagc
    19801 ccttttatga atctcatcaa aataagcgtt ttcttctcct aaaaattgtt taaaatactg
    19861 ttcaaattct tttctcataa atttattgca ccttaggaag attaattaaa gcattataat
    19921 atctataata atttcctatt ttttgagaat taaaatcaaa aaagttactt ttatatccac
    19981 ctatacgaga ataaaaagga acctgaacac tagttggctt gcttatagac acttcataaa
    20041 gcttgctaaa atcttgacaa tctacaactt ctgcttgatt ctctaaagct acaactaaaa
    20101 taccaaccgc attgtcatcg caaaattgcc taaaatcaga acgcttagga gaaagagtag
    20161 ccgttctaat caattgcgct ccaaaaatat caatatgagt aaaatatatc tgtggaaatt
    20221 ctctaacaag ttgattataa gtttgctcat caggagcaat cactaaccct ctatcgtaaa
    20281 gaaaatttaa aaccacctca tcacctacct caggtaaaac atttggcaaa ggtaaagcat
    20341 cttgtttaag agctaaaaaa acactaaatt gtaatttcgc taaaccatct tttttagcta
    20401 taacacttgc tctagctata atactttgtg aatttttaaa acgctgtatc acaacaccac
    20461 ttgaataaag ttttatatca gcactatctt taatataacc ataaatatca tcaactttta
    20521 taagttcact ttttataggt tttaaatcaa attcaaccgc aaagaggcta aggtttaaag
    20581 ctaaaaaaca cactatagtt ttaaacaaat ttgctcctta aataaaaaat tttatagaat
    20641 tataatcctt ttttgttaag caattgtaag aaaaataaag taaaatatag cttttaaat
//
LOCUS       DAPWAA010000027        20588 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.027, whole genome shotgun sequence.
ACCESSION   DAPWAA010000027 DAPWAA010000000
VERSION     DAPWAA010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20588
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.027"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            162..425
                     /locus_tag="RTF91_000917"
     CDS             162..425
                     /locus_tag="RTF91_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2018 family protein"
                     /protein_id="HDZ4943815.1"
                     /translation="MDIFDEILNKSPKEKFIEIIQNGNLGALEKVFEDFFADHIAMIE
                     LLEKQSLTEMDVKNFILENGDFIEERQNDIYIELGAKILGHEG"
     gene            428..964
                     /locus_tag="RTF91_000918"
     CDS             428..964
                     /locus_tag="RTF91_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exporting protein"
                     /protein_id="HDZ4943816.1"
                     /translation="MFKISPCLICIFFAFSNVLASEPTFAYTYKFTLKKDERASVQIK
                     EIGYEDKVQNFDFYWTLFDNTNIIVHSKFRKYPRQLVMSLRRNLDWVTQTLIPDYTNP
                     HIDRARLILEFSGYNKGLATFTVYIEDKESRLMVEFLDPRKKALQNPPQNNQVVPMIN
                     FNQPQVKPLTSKENNNSN"
     gene            978..1871
                     /locus_tag="RTF91_000919"
     CDS             978..1871
                     /locus_tag="RTF91_000919"
                     /EC_number="2.5.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexaprenyl-diphosphate synthase"
                     /protein_id="HDZ4943817.1"
                     /translation="MQKIDDLIKQFLQELDYEPILNMLLNVKSGKKLRSKLLLAIAEE
                     SEIAFKICASIELIHLASLLHDDIIDESELRRGSRSVNAEFGTKNALMLGDILYSKAF
                     YELSKVDTRFASIISDAVVKLAIGELMDVNLGEKFNINKEAYLKMIYNKTAILIEASA
                     RCGAILARLHEKDFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMSDFKEGKTTLPY
                     IYLYENLQEQDRVYLQTLFKKDLNENEKEWLKIKFEEQKALEKAIFEAKTYAKKANEA
                     IKKYDNNKLNDIIKAMIDREF"
     gene            1871..3169
                     /locus_tag="RTF91_000920"
     CDS             1871..3169
                     /locus_tag="RTF91_000920"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDZ4943818.1"
                     /translation="MYYCISFTHKNTDIALREKLSFSNETKKSEFLKIISTHENIEEC
                     LVISTCNRVEIVAFVKIACAEFVVKSLALLCDVHKDTLLEKADIFEDSGAIHHLFSVA
                     SSLDSLVVGETQIAGQLKDAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNP
                     ISVASVAVAKAKELADLTQKKAVVIGAGEMGELAAKHLIAAGAKVIILNRDLQKAKDL
                     CERLGVLSEYDSLENLKNYLNQYEFFFSATNAPNAIITNSLIEELPYKRYFFDIAVPR
                     DIDINENENIFVFTVDDLEIVVQKNLALREQEARMAYAIIGCQTSEFFRYLNDLALMP
                     IIKAIRLQAKECSDKQLKIALKKGYLKKSDKEEARKLIYQVFKAFLHTPTVNLKNLQG
                     KMQSDTVINAMRYVFDLQNNLEGLNQYKCEFDMENNDEIY"
     gene            3153..4862
                     /locus_tag="RTF91_000921"
     CDS             3153..4862
                     /locus_tag="RTF91_000921"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDZ4943819.1"
                     /translation="MMRFTKFYAPSLKEAPKDAILPSHIFLTRAGFVEQIGSGLYNFL
                     PLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKE
                     NEFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKD
                     GYSFHANEEDLEREFELMYQTYSQILQRMGLDFRAVEANSGAIGGSGSKEFMVLAKNG
                     EDDILICENCDYAANVEAAKRVKKTCQDERPEANYASKFYTPNIKTIESLAQFFKINA
                     FYTIKAVVKKAIYENESKLVVFFIRGSDDLQEVKAQNACNALELVNANEEELEKVGLT
                     PGFIGFIGLKDIDFYIDFELKNEKQMIMGANEKDYHLVGIDVVNLNKDRFKDLVEVKQ
                     GDCCAKCGAKLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGISR
                     LLAVAIEANHDEKGCIWNKVLAPFVLEIIVSNIKDEKALEFANKLYEDLTKLGLEVLL
                     DDRNERFGVKMNDFELMGFPYALVIGKGLENNEVELIQREALTKELVKIDELMEILKK
                     KVL"
     gene            4859..5248
                     /locus_tag="RTF91_000922"
     CDS             4859..5248
                     /locus_tag="RTF91_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integral memnbrane protein"
                     /protein_id="HDZ4943820.1"
                     /translation="MNYKLSLSPLFVLEIITSVLFIVFFGFGNFLLFILLSMIFGVVL
                     LVIFWKNMLEFQMGGLKGMLTQFSFVIAGFLLVFPGIITSVFGIFVFLFGIALKLMTK
                     SRYQYTKQEYQNSNEEIIDVEVIEDRK"
     gene            5245..6168
                     /gene="hemC"
                     /locus_tag="RTF91_000923"
     CDS             5245..6168
                     /gene="hemC"
                     /locus_tag="RTF91_000923"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDZ4943821.1"
                     /translation="MKLIIATRKSQLALWQSEYIAQILKKTHQIEVLLEGFKTKGDVL
                     LDSPLAKIGGKGLFTKELEESILRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSND
                     AMLSKNYKDFLSLPKGARVGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGEF
                     DAIILAMAGIKRLSLDKQVNFVYEFSKDELIPAASQGALGIESINDEKILELLKCLND
                     ENALIETSIEREFIATLEGGCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIC
                     KSDFKGFGESLAKEFIAKGAKELLKKAESMI"
     gene            6165..7967
                     /locus_tag="RTF91_000924"
     CDS             6165..7967
                     /locus_tag="RTF91_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HDZ4943822.1"
                     /translation="MKEFIQILKENDLLKIIEEPVDVDLEIAHLAYIEAKKGENGKAL
                     LFKNPIDKKLKKQYKFPVLMNTFCNEKALNLVFGRDYEEVANEISKLTKLHIPTSFKA
                     KIDFFMNLLSFKNIPPKRLKKNKALYDYKILNSLEELPILKTWEDDAGKFITMGQVYT
                     QNLDKTQNNLGMYRLQMSDKNELLMHWQIHKDGASFYHEYKNAGFKKMPVSVAIGGDP
                     LYIWCSQAPLPKGIFELLLYGFIKKSPAKLTPCENGIFVPYDSDVVIEGYVDLEEFKI
                     EGPFGDHTGFYTPAELFPVMKVEKIYAKKDAIYQATVVGKPPLEDKVMGLGTERLFLP
                     LLQTSVPDLIDYNMPENGVFHNLILAKIDVKYPAHAQQIMHAFWGVGQMSFVKHAIFV
                     DKNAPFLKDYGALIPYILNRFNTKKILISQGICDQLDHASPNSCFGGKAGLDACEEVQ
                     LDELEILEDEKLLELFKAKVELLNLKQFYKESKSPIVCILLDKKEKIEQSFQKLLEFK
                     KHFRILIFLDADNKLENPYMLVWRVVNNIDAKRDIFIKEERVGVDASAKGKAEGYLRA
                     WPKQTDCTKSVIEDLILRNILENNQELFARFEIF"
     gene            8122..8487
                     /gene="flaG"
                     /locus_tag="RTF91_000925"
     CDS             8122..8487
                     /gene="flaG"
                     /locus_tag="RTF91_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella length regulator FlaG"
                     /protein_id="HDZ4943823.1"
                     /translation="MEISKANGQMDVALANISQRTSETQASSNIQTDRNQSQGGDDVQ
                     QQGVGEKLADIVKKLNEQMDSLDTNVRFGYSDKIGSMYISVVEKNTGKEIRRIPSEEA
                     MRLAEYFRDAIGMIFDKES"
     gene            8490..10418
                     /gene="fliD"
                     /locus_tag="RTF91_000926"
     CDS             8490..10418
                     /gene="fliD"
                     /locus_tag="RTF91_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HDZ4943824.1"
                     /translation="MAFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENT
                     TKQKDLTEIKTKLLSFQTAVSSLADATVFANRKVVASITDNPAASLTVNSGVALQNMN
                     INVAQLAQKDVYQSKGLANDSGFVNAQLTGSADLTFFSNGKEYTVTVDKNTTYRDLAD
                     KINEASGGEIVAKIVNTGEKGTPYRLTLTSKETGEDSAISFYAGKKDAQGQYQQDSEA
                     EKIFSNLGWDLDTSQTVDPAKDKKGYSIKDNSLHIQTAQNAEFTLDGIKMFRSSNTIT
                     DLGVGMTLTLNKTGEVNFDVQQDFEGVTKAMQDLVDAYNDLVTNLNAATDYNSETGTK
                     GTLQGISEVNSIRSSILANLFDSQVVNGTTEDANGNKINTKVMLSIQDFGLSLNDAGT
                     LSFNSSKFEQKVKEDPDSTESFFSNITKYEDINYTGDVIKAGSLNSYLNPTGGDINGL
                     EFKPGDFNIVFNNQTYDLSKNSNGTNFKLTGQTEEELLQNLANHINSKGIEGLKVQVE
                     SYDQNGVKGFKLKFSGDGSSDFSIKGNDTILKQLGLSDVTITSKPIEGKGIFSKLKAT
                     LQEMTGKNGSITKYDESLTNDIKSLNTSKNSTQAMINTRYETMANQWLQYESILNKLN
                     QQLTTVTNMINAANKSNS"
     gene            10430..10816
                     /gene="fliS"
                     /locus_tag="RTF91_000927"
     CDS             10430..10816
                     /gene="fliS"
                     /locus_tag="RTF91_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HDZ4943825.1"
                     /translation="MQNSLAYNAYSQNQAGIESPQKLIEMLYEGILRFCARAKVAIRN
                     EDIEQRVYFVKRTTAIFIELINTLDYEKGGEVAHYLSGLYTREIQLLSLANLENNEER
                     INEVINVTKGLLEAWREVHSNETVAQ"
     gene            10797..11072
                     /locus_tag="RTF91_000928"
     CDS             10797..11072
                     /locus_tag="RTF91_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943826.1"
                     /translation="MKQWLNDFKLALIQEDIDKLENLLDKLDMKAFVKNLAKKSSSED
                     FLRESINDVFYQVQVLLQEAVVLIEQKKKIKAIEIQKFQKALTYFKS"
     gene            complement(11070..11390)
                     /gene="rnpB"
                     /locus_tag="RTF91_000929"
     ncRNA           complement(11070..11390)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="RTF91_000929"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            11504..12073
                     /gene="efp"
                     /locus_tag="RTF91_000930"
     CDS             11504..12073
                     /gene="efp"
                     /locus_tag="RTF91_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDZ4943827.1"
                     /translation="MASYSMGDLKKGLKIEIDGIPFKIVEYQHVKPGKGPAFVRIKIK
                     SFIDGKVLEKTFHAGDKCEAPNLEDKTMQYLYDDGENCQFMDTQTYEQVAISDDDVGE
                     AKKWMLDGMMVDVLFHNGKAIGVEVPQVVELKIIETAPNFKGDTQGSNKKPATLETGA
                     VVQIPFHVLEGEVIRVDTVRGEYIERANK"
     gene            12643..13935
                     /locus_tag="RTF91_000931"
     CDS             12643..13935
                     /locus_tag="RTF91_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDZ4943828.1"
                     /translation="MIMVFLIISSIIAAIVLGYITRHNVGIFAMIFAYVIGTFFMDLA
                     PKKIIAFWPISIFFVIFAVSLFYNFATVNGTLEKLAGHLMYRFANHPYLLPFVIFVVS
                     AIIAALGAGFYTVLAFMAPLTFLLCDKMGLSKIAGAMAINYGALGGANFMTSQSGIIF
                     RGLMENSGIEANAAFVNSSIIFAFTIILPIIVLSFFVLNAFKNKIKISVISKPESFNN
                     KQKTTLILMFLMIVVVLIFPILNIIFPHNEAINYFNKKIDIAMIAIIFVAIALFLKLA
                     DEKQVIALIPWGTLIMICGVGMLISIAVEAGTIKLFSDLVKNEINIIFIPLIMCAIAA
                     FMSLFSSTLGVVAPALFPIVPSIAASSGLSEVLLFSCIVVGAQASAISPFSSGGSLIL
                     GSCPDKHKEKLFKDLLLKAVPIGFIAAILATIIMSFVL"
     gene            13947..14744
                     /locus_tag="RTF91_000932"
     CDS             13947..14744
                     /locus_tag="RTF91_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDZ4943829.1"
                     /translation="MKIDTHAHIFLKKLNTVTNARYKPSYDASFKDYKANLHDYGFDK
                     GVLVQPSFLGVDNEFLLQSIKKDENIKAIVVVDENIKFEELKKLKERKACGIRLNLIG
                     KELPNFENIVWVRFFENLSKLKMQIEIQRDLDNDLVSIIENLLPYNCNIVIDHLARAN
                     ADLTNLEDLIRLKNSRIFFKISGFYRSKIDYINNEQAIKFAKKVYEILKEHFLLSNFI
                     FGSDWPHTNFEKNVNFLSALEAFNEIVISKKEQEQILGDNACALFDF"
     gene            complement(14750..15826)
                     /locus_tag="RTF91_000933"
     CDS             complement(14750..15826)
                     /locus_tag="RTF91_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDZ4943830.1"
                     /translation="MNKIKILKQYFKEIAKLNSSDQVWQMPFFAALGVGIVLGVSVFF
                     GKLNYGLIAMIGTLSFLYIPNTPLYHRMAVVMCCSFGIVSSFFLGILTHFLPSIFAFI
                     PIGLVAMGSSVLIRYYNIGAPGYFFFVFSCVLGAYSPFESKDFIFLVGLVFLGAMVAN
                     LMALLYSIVVIYGFKNSLPCEIPPREYIGFDAVFVDSLIMGSFVAFSIFLGTFLELER
                     SYWIAISCTTIMQGVTLNSIWIKQIQRIIGTALGVCFAWWLLSKQFHNIEFVLLMMFL
                     FFIGQFLLNRNYALAMIFFTPYATYLSEAANFMSENANALILSRLIDVVIGSILGLLG
                     GFVIYKPYLRIHFERIAKYIFRIK"
     gene            complement(15823..17055)
                     /locus_tag="RTF91_000934"
     CDS             complement(15823..17055)
                     /locus_tag="RTF91_000934"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDZ4943831.1"
                     /translation="MRNLLENIKKNSQKLLNLTPKDKEKIILNLAQILKENFKIILEA
                     NEKDMANFTKGGAMQDRLLLDEKRILSLCESLEKIAYIEDPIGKISKGWKNYAGLSIQ
                     KISIPLGLICVIYEARPSLSAEIVALMIKSSNACVFKGGSEAKFTNAAMFALIFKVLK
                     KFNLQDCFAMFYERNEIMQILAFDDLIDVIIPRGSSNMIQEIINNTKIPLIKQDKGLC
                     HAFVDESANLDIALKIILNAKCQRVSVCNALETLLIHEKIAKNFINLLIPEFKKFKVK
                     IHAHENTLTYFKNSNLEVFKADENTFDTEWLDFALSVKLVKDCNEAIEHINKHSSSHS
                     ETIISNNTSNIAKFQRLINSSCIYANASTRFSDGGEFGFGGEIGISTSKLHARGPMGV
                     EDMCTYKYIINGEGQIRE"
     gene            17126..18061
                     /locus_tag="RTF91_000935"
     CDS             17126..18061
                     /locus_tag="RTF91_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HDZ4943832.1"
                     /translation="MKKIDLIVIGAGPTGIGCAVEAKFKNKEVLILEKSNNICQTLMQ
                     FYKDGKRVDKAYKGCEGTNYGHVLFEDGTKESTIETFKNALKEHNIEVEFGSEVESVK
                     NENGVFLVSTGKGVYECKNIIIAIGRMGKPNKPDYKLPMTLTKIINFNANSVLGNEKI
                     LVVGGGNSAAEYAVDLANSNQVSLCYRKKEFTRLNDINLKDINEAGNSGKVELKLGID
                     INEVEDDNGKAKVNFTDGTSQIYDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENK
                     QSNVKGIFVAGDIATKNGASIVTGLNDAVKILSVL"
     gene            18239..19567
                     /locus_tag="RTF91_000936"
     CDS             18239..19567
                     /locus_tag="RTF91_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDZ4943833.1"
                     /translation="MSSIFSTLSPFRLFIKCAVPNVISMAFISFYYIVDGIFVGKYLG
                     SDALAALALIIPFVMMSFALADMIAIGSAVQISMCLGLGKKNLAKKIFSSSMLIIFII
                     SCFIGILEYFLGPVLIDCLNVSDEIKTMSKECMFVFALFAPFTMLSFALDNYLRICGK
                     TAYSMVVNVIIALSNIALDYIFIVGLGWGLFSAALATCLGLILGGIFGIFPFLFQNLE
                     LKFSSLYMNLKIFKNILYNGSSEFFGNISGSLYSIFANFVLLKISTTQAVAAFSIILY
                     IDSFIIMLIIAMGDAMQPALSYNYAKKDFLRIKAIVKVVFFAGGILSLFSIMLIFIFG
                     ENLITLFTKENDQEFKTFAYTAFMLFAFNYFFAWFNVLSGSFLTAFNKANVSLILSLA
                     KNLFIPLFFLWILSYFIGLNGVWLSPFFAEFCVLILAWIFLKRIFKDLSL"
     gene            complement(19614..20543)
                     /locus_tag="RTF91_000937"
     CDS             complement(19614..20543)
                     /locus_tag="RTF91_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2860 family protein"
                     /protein_id="HDZ4943834.1"
                     /translation="MKKYLFSCALVSILTHSVMAVEFQEGFSGNLSIGVGARNIKSNI
                     STLANSDYLSSYNADNSDSSFIPFIGIELYYGNLIDNDRIFIKNYNGRDISGITLGYE
                     RAYLERFSTSFSVISSLREKAYANPYEIGNREETDVDRYGFKISQLYESDFGKFTASY
                     LFSKNKYDKDAIIQSSLKRKGYYHEFELNYNYSLLNLGLNYDYNDADGKAQSYSRYGF
                     SIGANLTFANDYIFTPNLNLSKYDAVGTDPIFHKKQDGNIIKLNLKVVKNQFLGYNGL
                     YGFANYGIEKRNSDIGFYDETYQIVLTGIGYKF"
BASE COUNT         7262 a         2506 c         3608 g         7212 t
ORIGIN      
        1 tttaatcgcc attcacttta aaaattttaa attataaaaa caaactttaa atatttttaa
       61 aataaatagg tattgaaatt tataaggctt aagaaagatt aattcctttt taacttttaa
      121 aattctataa tcgtttcatt ttaaattgct taggaaaaac tatggatatt tttgatgaaa
      181 ttttaaacaa aagtcccaag gaaaaattta tagaaattat acaaaatgga aatttaggag
      241 ccttagaaaa agtttttgag gatttttttg ccgatcatat tgccatgata gaacttttgg
      301 aaaaacaaag tctaacagaa atggatgtaa aaaatttcat attagaaaat ggtgatttta
      361 tagaagaaag acaaaatgat atttatatag aattgggtgc aaaaatttta ggacatgaag
      421 gctaaaattg tttaaaataa gcccctgttt aatttgtatt ttttttgcct ttagtaatgt
      481 tttagcatct gagccaactt ttgcttatac ttataaattt actcttaaaa aagatgaaag
      541 agctagtgta cagattaagg aaataggtta tgaagataag gtgcaaaatt ttgattttta
      601 ttggactttg tttgataata ccaatatcat cgtgcattcg aaatttcgca aatatccgcg
      661 tcaacttgtg atgagtttaa gaagaaattt agattgggta actcagactt taatacctga
      721 ttatactaac cctcatattg atagagcaag acttatttta gaatttagtg gttataataa
      781 aggtttagca acttttacgg tttatataga ggataaggag tctcgtttaa tggtagaatt
      841 tttagaccca agaaaaaaag ctttacagaa tccaccacaa aataatcagg ttgttcctat
      901 gattaatttt aatcaacctc aggtaaaacc attaacaagc aaagaaaata ataacagcaa
      961 ttaacaagga aaagatagtg caaaaaatag atgatttaat aaaacagttt ttacaagagc
     1021 ttgattacga acctatttta aacatgcttt taaatgtaaa atcaggaaag aaattacgct
     1081 caaaattgtt attagctatc gcagaagaaa gtgagattgc ctttaaaatt tgcgcaagta
     1141 tagaattgat acatcttgca agtttgttac atgatgatat tattgatgag agtgaattaa
     1201 ggcgcggatc aagatctgtt aatgctgaat ttggtacaaa aaatgccctt atgttaggcg
     1261 atattttata ttcaaaagct ttttatgaat taagcaaagt ggatactaga tttgcaagta
     1321 ttatttcaga tgctgttgta aagcttgcta taggcgaact tatggatgtt aatttgggag
     1381 aaaaatttaa tattaataaa gaagcttatt taaaaatgat ctataataaa acagctattt
     1441 tgattgaagc aagtgcgaga tgtggagcta ttttggctag attgcatgaa aaagattttg
     1501 cagaatatgg caaaaattta ggactcgctt ttcagatgat cgatgatatt ttagatatta
     1561 aaagtgatga aaaaattctt ggaaaacctg ctatgagtga ttttaaagaa ggtaaaacca
     1621 ctttacctta tatttacctt tatgaaaatt tacaagaaca agatagagtg tatttacaaa
     1681 ctttatttaa aaaagattta aatgaaaatg aaaaagagtg gttaaaaatt aaatttgaag
     1741 aacaaaaagc tttagaaaaa gctatttttg aagctaaaac ttatgcaaaa aaggctaatg
     1801 aagcgattaa aaaatatgat aataataagc ttaatgatat tattaaagct atgatagata
     1861 gggaatttta atgtattatt gtatatcttt tactcataaa aatacagata ttgccttaag
     1921 agaaaagtta agtttttcta atgaaactaa aaaaagcgaa tttttaaaaa tcatcagtac
     1981 tcatgaaaat attgaagaat gtttggttat aagtacttgt aatcgtgttg aaattgttgc
     2041 ttttgtaaaa atagcctgtg ctgagtttgt tgttaaatct ttggctttac tttgtgatgt
     2101 tcataaagat actttgcttg aaaaagctga tatttttgaa gatagcggag ctattcacca
     2161 tcttttttct gtagcaagct ctttagatag tttggtggtc ggagaaactc agattgcagg
     2221 acagttaaaa gatgcttttg cttttgctgt aaaaaataat ttttgcggag tacatctttc
     2281 aagagcggtg catagtgctt ttaaatgtgc tgctaaagtg cgcaacgaaa ctcaaatttc
     2341 taaaaatcct atttctgtag ctagcgttgc tgtagcaaaa gcaaaagaac ttgcggattt
     2401 aacgcaaaaa aaagctgttg ttattggagc tggagaaatg ggagagcttg cagcaaaaca
     2461 tttaattgct gcgggtgcta aagtgattat tttaaatcgt gatttacaaa aagctaaaga
     2521 tttatgtgag agacttggtg ttttaagtga gtatgatagt ttggaaaatt taaaaaatta
     2581 tttaaatcaa tatgagtttt ttttctcagc taccaatgca ccaaatgcca ttattacaaa
     2641 ttctttaatt gaagaacttc cctataaaag gtattttttt gatattgctg ttccaaggga
     2701 tattgatata aatgaaaatg aaaacatatt tgtttttact gtagatgatc ttgagattgt
     2761 ggtgcaaaaa aatttagctt taagagagca agaagctcgc atggcttatg cgataatagg
     2821 ttgtcaaaca agtgaatttt ttagatattt aaatgatttg gctttgatgc ctattattaa
     2881 ggctatacgc ttgcaagcca aagaatgttc agataaacag cttaaaattg cattaaaaaa
     2941 aggttatttg aaaaaatctg ataaagaaga ggctagaaag ttgatttatc aagtttttaa
     3001 ggctttttta cacacgccta ctgtaaattt gaaaaattta caaggtaaaa tgcaaagtga
     3061 tacagttatt aatgccatgc gttatgtttt tgatttgcag aataatcttg aaggtttaaa
     3121 tcaatataaa tgcgaatttg atatggagaa taatgatgag atttactaaa ttttatgcac
     3181 caagtttaaa agaagcacca aaagatgcaa ttttaccgag tcatattttt ttaacacgtg
     3241 cgggatttgt agaacaaatt ggtagcggac tttataattt tctaccttta ggaaaaagag
     3301 ttttagacaa gattaaaaat atagttaaag aagaaatgga taaagctgga gcacaagaag
     3361 taaatcttag ttttatcact cctgcaagtt tgtggcaaga aagtggacgt tataatgttt
     3421 ttggaaaaga acttttacgt tttaaagaca gaaaagagaa tgaatttgtt ttaggtccaa
     3481 cacacgaaga agctatgctt tctttagtaa aaaataaaat cacaagttat aagcaactcc
     3541 ctttgcactt atatcaaatc ggacttaaat ttcgcgatga ggcaagacca agatttgggc
     3601 ttttaagatg tcgtgaattt ttaatgaaag atggatatag ttttcatgct aatgaagagg
     3661 atttagagcg tgagtttgaa cttatgtatc aaacttattc tcaaattttg caaagaatgg
     3721 ggcttgattt tagagcagtg gaggctaata gtggagctat tggtggaagt ggttctaagg
     3781 aatttatggt tttggcaaaa aatggagaag atgatatttt aatttgtgaa aattgtgatt
     3841 atgcggccaa cgttgaagca gctaaaagag ttaaaaaaac ttgtcaagat gagcgtcctg
     3901 aggcaaatta tgcaagtaaa ttttacactc caaatattaa aaccatagaa tctttagcac
     3961 aattttttaa aattaatgct ttttatacga ttaaagcggt ggtaaaaaaa gccatttatg
     4021 aaaatgaaag caaattagtg gtgtttttta taagaggaag tgatgatttg caagaggtta
     4081 aagctcaaaa tgcttgtaat gcccttgaat tagttaatgc aaacgaagaa gaattagaaa
     4141 aagtgggttt gactcccggt tttataggtt ttataggatt aaaagatata gatttttata
     4201 tagattttga gcttaaaaat gaaaaacaaa tgattatggg tgcaaatgaa aaagattatc
     4261 atttagttgg cattgatgtt gtgaatttaa acaaagatcg ttttaaagat ttggttgaag
     4321 ttaagcaagg cgattgctgt gctaaatgtg gagcaaaatt aaaacaaagc aagggtattg
     4381 aagtaggaca tatttttaaa ctgggacaaa agtattctaa agctatgaat gcaaatttct
     4441 tagatgaaaa tggtaaaagt caaccttttt atatgggatg ttatggcata ggtatttcac
     4501 gcttgcttgc tgtggctatt gaagcaaatc atgatgaaaa agggtgcatt tggaataagg
     4561 ttttagctcc ttttgtgctt gaaattattg tttcaaatat caaagatgaa aaagctttag
     4621 aatttgctaa taagctttat gaggatttaa ctaaacttgg attagaagtg ttgcttgatg
     4681 atagaaatga acgttttgga gttaaaatga atgattttga actcatgggc tttccttatg
     4741 cactagttat tggaaaagga ttagagaata atgaagtaga acttatccaa agagaagctt
     4801 tgacaaaaga acttgtaaaa atcgatgagc ttatggaaat tcttaaaaag aaagtgttat
     4861 gaattataaa ttaagtttaa gtcctttatt tgtacttgaa atcatcacaa gtgtgctttt
     4921 tatagttttt tttggttttg gtaatttttt gttgtttata cttttaagta tgatttttgg
     4981 tgtggtttta ttggtaattt tttggaaaaa tatgcttgaa tttcaaatgg gcggtttaaa
     5041 gggtatgttg acgcaatttt cttttgttat tgcaggattt ttgcttgttt ttccagggat
     5101 tattacaagt gtttttggaa tttttgtatt tctttttggt attgctttga aattaatgac
     5161 aaagtcaagg tatcaataca ccaagcaaga gtatcaaaat tctaatgaag aaattattga
     5221 tgttgaagtt atagaggata gaaaatgaag cttattattg caacaagaaa aagtcaatta
     5281 gctctttggc aaagtgagta tatagctcaa attttaaaaa aaacacatca aatcgaagta
     5341 cttttagaag gttttaaaac taagggcgat gttttattgg attctccttt ggcaaaaatt
     5401 ggtggtaagg gattatttac aaaagagctt gaagaaagta tattaagaaa agaagcacat
     5461 ttggcggtac atagtttaaa agatgtgcct agtttttttc cgcaaggttt agttttagct
     5521 gcggtaagta aaagagagca aagcaatgat gcaatgctga gtaaaaatta taaagatttt
     5581 ctttctttac caaaaggcgc aagagttggt accactagtc ttaggcgcaa gatgcagctt
     5641 ttattattaa gacctgattt agagattatt tctttgcgtg gtaatgtaaa ttctcgtata
     5701 gagaaattaa aaaatggtga atttgatgcg atcattttag ctatggcggg aattaaacgc
     5761 ttaagcttag ataaacaagt caattttgtt tatgaattta gcaaggatga gctaatccct
     5821 gcagcttctc aaggagcttt aggtatagag agtataaatg atgagaaaat tttagaactt
     5881 ttaaaatgct taaatgatga aaatgctttg attgaaacaa gtatagaaag agaatttatt
     5941 gctactttag aaggaggttg tcaagtgcct ataggtatca atgcagaact tttaggagat
     6001 gaaatttgcg tgcgtgcagt gcttggactt cctgatggaa gtgaaatttt aaaagataaa
     6061 agaatgattt gcaaaagtga ttttaaaggt tttggagaga gtttggctaa agaatttatt
     6121 gccaaaggtg ctaaggaact tttaaaaaaa gctgagagta tgatatgaaa gaatttattc
     6181 aaattttaaa agaaaatgac ttattaaaaa ttatcgaaga acctgtagat gttgatcttg
     6241 aaattgctca tttagcttat atagaagcta aaaagggcga aaatggcaag gctttattgt
     6301 ttaaaaatcc tatagataaa aaattaaaaa aacaatataa atttcctgtt ttgatgaaca
     6361 ctttttgtaa tgaaaaggct ttaaatttgg tttttgggcg tgattatgaa gaagtggcta
     6421 atgaaatctc aaaactaacc aaacttcaca ttcctacgag ttttaaagca aaaatagatt
     6481 tttttatgaa tttgttaagc tttaaaaata ttcctcctaa aagactgaaa aaaaataaag
     6541 ctttatatga ttataaaatt ttaaattcgc ttgaagaact tcctatactt aaaacttggg
     6601 aagatgatgc gggtaaattt attactatgg ggcaagttta tactcaaaat ttagataaaa
     6661 ctcaaaataa tcttggtatg tatcgtttgc aaatgagtga taagaatgag cttttgatgc
     6721 actggcaaat tcataaagac ggtgcaagtt tttatcacga atacaaaaat gccggtttta
     6781 aaaaaatgcc cgtaagtgta gctataggag gagatcctct ttatatttgg tgttctcaag
     6841 cacctttgcc taaagggatt tttgaacttt tgctttatgg ttttatcaaa aaaagtcctg
     6901 caaaattaac accttgtgaa aacggtattt ttgtacctta tgatagtgat gtggttattg
     6961 aaggttatgt agatttagaa gagtttaaaa tcgaaggtcc ttttggggat catacaggtt
     7021 tttatacacc tgctgaactt tttcctgtga tgaaagtaga aaaaatttat gctaaaaaag
     7081 atgcgattta tcaagcaacg gttgtaggaa agcctccttt agaagataaa gttatgggac
     7141 ttggcaccga aagacttttt ttacctttac tacaaacttc agttcctgat ttaatagatt
     7201 acaatatgcc tgaaaatgga gtttttcata atcttatttt agcaaaaatc gatgtaaaat
     7261 atcctgctca tgcacaacaa atcatgcatg cattttgggg cgtgggacaa atgagttttg
     7321 ttaagcatgc aatttttgta gataaaaatg cacctttttt gaaggattat ggtgctttga
     7381 tcccttatat tttaaatcgt tttaatacaa agaaaatttt aatttcacaa ggaatttgcg
     7441 accaactaga tcatgcttcg cctaattctt gttttggagg taaagcaggg cttgatgctt
     7501 gtgaagaagt acagcttgat gaacttgaaa ttttagaaga tgaaaaatta ttagaactct
     7561 ttaaagctaa agtagaactt ttaaatttaa aacaattcta taaagaaagt aaaagcccta
     7621 tagtttgtat tttgcttgat aaaaaagaaa aaattgagca aagttttcaa aaacttttgg
     7681 aatttaaaaa acattttaga attttaatat ttttagatgc tgataataag cttgaaaatc
     7741 cttatatgct tgtgtggcgt gtggtaaata atatagatgc taaaagagat atttttatca
     7801 aagaagaaag agttggagtg gatgctagtg ccaagggtaa agctgaaggt tatttaagag
     7861 cttggcctaa gcaaacagat tgtactaaaa gtgtgataga agatttaatc ttgcgtaata
     7921 ttttagaaaa caatcaagaa ctttttgcta gatttgaaat tttttaagat aattgagatt
     7981 tattttaaat ttttggcaca gtttttgctt gttgttttta tattgaaaaa taaatttttc
     8041 tttataaggt attcataatt ttataaattt accgatataa tcttttaacc agcaataaga
     8101 aattttaaaa aggattttaa aatggaaata tcgaaggcaa atgggcaaat ggatgtagct
     8161 ttggcaaaca ttagccaaag aacaagtgag acgcaggcta gttcaaacat tcaaaccgat
     8221 agaaatcaaa gccaaggagg cgatgatgta cagcaacaag gtgtgggtga aaagttagct
     8281 gatattgtaa aaaaactaaa tgaacaaatg gattctttag ataccaatgt tcgttttgga
     8341 tatagtgata aaataggctc tatgtatatt agcgtggttg aaaaaaacac tggaaaggaa
     8401 attcgtcgaa ttcctagtga agaagctatg agattagctg agtattttag ggacgctata
     8461 gggatgatat ttgataagga gagttaaaaa tggcatttgg cagtctatct agtttaggat
     8521 ttggttctgg ggttttaacg caggatacta tagataaatt aaaagaagca gaacaaaaag
     8581 ctcgaatcga tccttatact aagaaaattg aagaaaatac aactaaacaa aaagatttaa
     8641 cagagattaa aactaaatta cttagttttc aaacagctgt ttcatcattg gctgatgcta
     8701 cagtttttgc aaatagaaag gttgtggcaa gcattacaga taatcctgct gcaagtctta
     8761 cggttaattc aggtgttgct ttacaaaata tgaatatcaa tgttgctcaa cttgcacaaa
     8821 aagatgtgta tcaaagtaaa ggattggcaa atgatagtgg ctttgttaat gcacaattaa
     8881 ccggaagtgc tgatcttact tttttttcaa atggcaaaga atatactgtt acagtagata
     8941 aaaatacaac ttatagagat ttagctgata aaattaatga ggctagtggg ggagagattg
     9001 ttgcaaagat tgtaaacaca ggagaaaaag gcactcctta ccgcttaact ttaactagta
     9061 aggaaacagg cgaagatagt gcgataagtt tttatgcggg aaaaaaagat gcgcagggtc
     9121 aatatcaaca agattcagaa gcagaaaaga tattttcaaa tcttggatgg gatttagata
     9181 caagtcaaac tgttgatcca gctaaggata aaaaaggtta tagtattaaa gataattctt
     9241 tacatattca aactgcacaa aatgcagaat ttacacttga tggtattaag atgtttagat
     9301 caagcaatac tattaccgat cttggtgtgg gaatgacttt aactttaaat aaaacaggtg
     9361 aagtgaattt tgatgtacaa caggattttg aaggtgtaac aaaagctatg caagatttgg
     9421 tggatgctta taatgatttg gtaaccaatc ttaatgctgc aactgactat aacagcgaaa
     9481 ccggaacaaa aggaacttta caaggtatta gtgaagtaaa ttcaatacgt tcaagtattc
     9541 ttgctaattt atttgattct caagttgtta atggaactac tgaagatgca aatggtaata
     9601 aaattaatac taaggttatg ctttctatcc aagattttgg gttaagctta aatgatgcag
     9661 gtactttgag ttttaactct tcgaaatttg aacaaaaagt taaagaagat ccagattcta
     9721 ctgaaagctt tttttcaaat attactaaat acgaggatat taattatacg ggagatgtga
     9781 ttaaggcagg aagtttaaat agctatctta atcctactgg aggtgatatc aatggtttag
     9841 aatttaaacc aggagatttt aatatagttt ttaataatca aacttatgat ttgtccaaaa
     9901 attctaatgg tactaatttt aaattaacag gacaaacaga agaagaatta cttcaaaatt
     9961 tagctaatca tatcaatagt aaaggtattg aaggtttaaa agttcaagtt gagtcttatg
    10021 atcaaaatgg tgttaaaggg tttaagttaa aatttagtgg agatggtagt tctgattttt
    10081 cgatcaaggg aaatgataca attctcaagc aattaggatt atctgatgtg actataacat
    10141 ctaaacctat tgaaggtaaa ggtatttttt caaaattaaa agcaacattg caggagatga
    10201 ctggaaaaaa tggttcaatt acaaaatatg atgagagtct gacaaatgat attaaatcat
    10261 taaacacatc taaaaattca actcaagcta tgattaatac aagatatgaa accatggcaa
    10321 accaatggtt gcaatatgag agtattttaa ataaactcaa tcagcagtta acaactgtaa
    10381 ccaatatgat caacgcagca aataaatcaa atagttaagg ataaaaaaga tgcaaaatag
    10441 tttagcttat aatgcttatt ctcaaaatca agcggggata gaatctccgc aaaaacttat
    10501 tgaaatgctt tatgaaggaa ttttgcgttt ttgtgcaaga gctaaagtgg caataagaaa
    10561 tgaagatata gagcaaagag tgtattttgt gaaaagaact acagctattt ttatagagct
    10621 tattaatact ttagattatg aaaaaggcgg agaagtggca cattatttga gtggacttta
    10681 tacaagagaa attcagcttt tatctttagc aaatttagaa aataacgaag agagaatcaa
    10741 tgaggttatt aatgtaacta aaggtttgct agaggcttgg agagaagtgc atagtaatga
    10801 aacagtggct caatgatttt aaacttgcac taattcaaga agatattgat aagcttgaaa
    10861 atttacttga taagcttgat atgaaagctt ttgttaaaaa cttagctaaa aaatcatcct
    10921 ctgaagattt tttaagagaa agcataaatg atgtatttta ccaagttcaa gttcttctgc
    10981 aagaagctgt tgtgctgatt gagcaaaaga aaaaaataaa ggccattgaa attcaaaagt
    11041 ttcaaaaagc tttaacatat tttaaatctt aaaaaagcat agcgataagc cgagttctgt
    11101 cgagaatgct catttatcta gttttgtttt tgcaaacaaa atcaagcgaa gggttaaaac
    11161 aaagactcta accatccctt cttgctgcac attgggttta catagccgaa attgttacca
    11221 aaatcgctgg tgggctttta ctccgccgtt tcaccttttc cactttcgtg gtagttttct
    11281 ttctgttgca ctatccctta ggtcgcccta gccatctgtt agatggaatg tttgtcttta
    11341 gcagcccgga ctttcctctt ctaaaaagaa gcgagcattt gctatgcttt aagtttagat
    11401 tttagcgtaa ttttacttat ttttttatca aataaaataa ttttattgtg atatcaatca
    11461 aaatttgata gaattatttt ttatttttta ataaaggaaa tttatggcat cttattcaat
    11521 gggtgattta aaaaagggac ttaaaataga aatcgatgga attcctttta aaatagttga
    11581 gtatcagcat gtaaaaccag gtaaaggtcc tgcttttgtg cgcattaaaa tcaaatcttt
    11641 tatcgatggt aaagtgcttg aaaaaacttt tcatgcaggc gataaatgcg aagctccaaa
    11701 tttagaggat aaaactatgc agtatcttta tgatgatggc gaaaattgcc agtttatgga
    11761 tacgcaaact tatgaacaag tggctatcag tgatgatgat gtgggcgagg caaaaaaatg
    11821 gatgcttgat ggtatgatgg tggatgtgct ttttcacaat ggtaaggcta tcggtgtaga
    11881 agttccacaa gttgtagaac tgaaaatcat cgaaacagct ccaaatttca aaggcgatac
    11941 tcaaggatca aacaaaaaac cagctacact agaaacaggt gcagtagtgc aaattccttt
    12001 tcatgtgtta gaaggtgagg ttatacgcgt tgataccgtg cgcggtgagt atatagaaag
    12061 agcaaataaa taatttaaaa gagcttttgg agtattccaa ggctttttaa atttatataa
    12121 aaatttattt tccttgctta atttcttatt tcattcttaa aaatattttt taattttttt
    12181 caatttaaaa tttctataat attttaattt atattgtaaa gatggtttat ataatggtta
    12241 ctcttctaca tctttgattg ttttaggctt tgttttaaaa tcaatccttt tttagtggtg
    12301 actttggttg gaatttatcc tgaacttgtt ttgggttttg attaagattg ttagtgatat
    12361 aacaaatctc tataaaacaa actttttatc ttgccttagc agtgctttta atgctatttt
    12421 acctaatttt gataaaagtt ataactcata tagaagatga ttatcttgca tcacattggt
    12481 tgggaagctt tgttttgctt gccatggatt ggatatttta taaaatattt ttataagatg
    12541 agtaaatttg ttactaaata gatatttttt aaatttagat tttgctttta tgctttgaaa
    12601 aatatatttt ttgatattat aagcgctata atattttaaa ggatgataat ggttttttta
    12661 attatctcta gtattatagc ggccattgtt ttaggctata ttactaggca taatgttgga
    12721 atttttgcca tgatttttgc ttatgttata ggaacttttt ttatggattt agctcctaaa
    12781 aaaatcatag ctttttggcc tatttctata ttttttgtta tttttgctgt ttcattgttt
    12841 tataattttg caaccgtaaa tggaactctt gaaaaattag ctggacattt gatgtatcgt
    12901 tttgctaatc atccttattt gcttcctttt gttatttttg tggttagtgc tattatagct
    12961 gccttagggg cgggttttta tacggtttta gcttttatgg caccacttac ttttttgctt
    13021 tgtgataaaa tgggtttaag taaaattgct ggagctatgg ctataaatta tggtgcttta
    13081 ggtggggcaa attttatgac ttctcaaagt gggattattt ttcgaggatt gatggaaaat
    13141 tcgggaattg aagcaaatgc agcttttgta aattctagta ttatttttgc ttttactata
    13201 attttaccta ttatagtatt gtcttttttt gtacttaatg cttttaaaaa caaaataaaa
    13261 attagtgtta tttcaaaacc tgaatcattt aataataagc aaaaaactac tttaattctt
    13321 atgtttttga tgattgttgt tgttttaatc ttccctatat taaatattat ttttccacat
    13381 aatgaggcaa ttaattattt taataaaaaa atagatatag ctatgatagc tataattttt
    13441 gttgccattg ctttattttt aaaactagca gatgagaaac aagttattgc tttaattcct
    13501 tggggaactt taataatgat ttgtggagta gggatgctta ttagtatagc ggttgaagca
    13561 ggaactataa aattattttc agatcttgta aagaatgaga ttaatataat ttttattcca
    13621 ttgataatgt gtgctattgc agcttttatg tctctttttt caagcacctt aggtgtagtt
    13681 gctccagcac tttttcctat agttccaagt atagctgcaa gtagtgggct aagtgaggtg
    13741 ttgctttttt cttgtattgt tgtaggggct caagcttctg ctatttcacc tttttcttct
    13801 gggggaagtt taattttagg atcttgtcct gataaacata aagaaaaatt atttaaagat
    13861 ttacttctaa aagctgtgcc tatagggttt atagcggcca ttttagctac tattataatg
    13921 agctttgttt tataaggata attttaatga agattgatac tcatgcacat atatttttaa
    13981 aaaaattaaa tacagttaca aacgcgagat ataaacccag ctatgatgct agctttaaag
    14041 attataaagc aaatttacat gattatggct ttgataaggg agttttagtt caaccaagtt
    14101 ttttaggggt tgataatgaa tttttacttc agagcattaa aaaagatgaa aatataaaag
    14161 ctatagttgt agttgatgaa aatatcaaat ttgaagagct taaaaaactt aaagaaagaa
    14221 aagcttgtgg gattagacta aatttaattg gcaaagagtt accaaatttt gaaaatatag
    14281 tttgggttcg attcttcgaa aatttaagta aacttaaaat gcaaatagaa attcaaagag
    14341 atttagataa tgatcttgta agtattattg aaaatttact tccctataat tgcaatattg
    14401 ttattgatca tttagcaaga gctaatgcag atttaacaaa tttagaggat ttaattcgtt
    14461 taaaaaattc tagaatattt tttaaaatta gcggctttta tagatcaaaa atagactata
    14521 ttaacaatga acaagctata aaatttgcaa agaaagtata tgaaatttta aaagaacatt
    14581 ttttgcttag taattttatt tttggaagtg attggccaca tacaaatttt gaaaagaatg
    14641 tcaatttttt atcagcctta gaagctttta atgaaatcgt tatttctaaa aaagaacaag
    14701 agcaaatttt aggagacaat gcttgtgctt tatttgattt ttgagttttt tattttattc
    14761 taaagatata ttttgcaatg cgttcaaaat gaattcttag ataaggttta taaattacaa
    14821 aaccacccaa aagacccaaa atgcttccta ttacgacatc aattaagcgc gaaagtatca
    14881 atgcatttgc attttcactc ataaaattag ctgcttctga aagataagta gcataaggag
    14941 taaaaaaaat catagctaaa gcatagtttc gattgagtaa aaattgtcct ataaaaaata
    15001 aaaacatcat aagcaaaaca aactctatat tgtgaaattg tttagataaa agccaccatg
    15061 caaaacatac ccctaaagct gttcctatga tacgttgaat ttgtttaatc catatagaat
    15121 ttaaagtgac gccttgcatt atagttgtgc aagaaatagc tatccaataa cttctttcaa
    15181 gttctaaaaa agttcctaaa aatatagaaa aagccacaaa agaacccatg attaaagaat
    15241 ctacaaaaac cgcatcaaaa cctatgtatt ctctaggtgg aatttcgcaa ggtagagaat
    15301 ttttaaaccc ataaatcaca acgatagaat acaaaagagc cattaaattt gccaccattg
    15361 ctccaagaaa aacaagccct actaaaaaga taaaatcttt agattcaaaa ggagaataag
    15421 cccccaaaac acaagaaaat acaaagaaaa aataccctgg cgctccgata ttataatatc
    15481 taatcaaaac agaacttccc atagccacaa gtcctatagg gataaaagca aaaattgaag
    15541 gtagaaaatg agttaaaatt cctaagaaaa agctagaaac tataccaaaa gaacagcaca
    15601 ttacaacagc cattctatga tataaaggag tatttggaat atataaaaaa gataaagttc
    15661 ctatcatggc aatgagtccg tagtttaatt ttccaaaaaa tacactaact cctaaaacta
    15721 tacccactcc taaagctgca aaaaaaggca tttgccaaac ttgatcgctt gaatttagtt
    15781 tggcaatttc tttaaaatat tgctttagta tttttatttt attcactctc taatttgtcc
    15841 ttccccattg attatatatt tataagtgca catatcttca acccccatag ggcctcttgc
    15901 atgtagtttg cttgttgaaa ttccaatctc tccaccaaag ccaaattcgc ctccatcgct
    15961 aaagcgcgtt gaagcattag cgtaaataca agatgagttt ataaggcgtt gaaatttggc
    16021 tatatttgaa gtattatttg aaataatggt ttcagaatgc gaggagctat gtttgttgat
    16081 atgctctata gcttcattac aatcttttac taattttaca cttaaagcaa aatcaagcca
    16141 ttctgtatca aaggtgtttt catctgcttt aaaaacttcc aaatttgagt ttttaaaata
    16201 agtcaaagta ttttcatgag catgaatttt gactttaaat tttttaaatt cagggattaa
    16261 aagatttata aaatttttag caattttttc atgtattaaa agcgtttcta gagcattaca
    16321 aacgcttact ctttggcatt ttgcattaag gattattttt aaagctatat ctaagttagc
    16381 gctttcatct acaaaagcat ggcataagcc tttatcttgc ttgatgagag gaatttttgt
    16441 attgttaata atttcttgta tcatatttga acttccacga ggtatgatta catcaattaa
    16501 atcatcaaag gctagaattt gcatgatttc atttctttcg taaaacatag caaaacaatc
    16561 ttgcaaatta aatttcttaa gtaccttaaa aataagggca aacatggctg catttgtaaa
    16621 ttttgcttcg cttccacctt taaatacaca agcattagag ctttttatca tcaaagctac
    16681 gatttcagca ctaagagaag gtcttgcttc ataaattacg caaataagtc ctaaaggaat
    16741 gcttatcttt tgtatgctca aacccgcata atttttccaa cctttagaaa ttttacctat
    16801 aggatcttca atataagcga ttttttctaa actttcacaa agagataaaa tgcgtttttc
    16861 atctaacaaa agcctatctt gcattgcccc accttttgtg aaatttgcca tatctttttc
    16921 atttgcttct aggataattt tgaaattttc ttttaaaatt tgagctaagt ttaaaataat
    16981 tttttcttta tctttaggtg ttaagttaag tagtttttga gaatttttct taatattttc
    17041 aagcaaattt cgcattttta atcctttatt tacaaaaaac ttgataaatt atacaaaaaa
    17101 atttagaatt gaaaggtaaa tatcaatgaa aaaaatagat ttaattgtaa taggtgcagg
    17161 tccaacgggt ataggctgcg cagttgaagc taagtttaaa aataaagaag ttttgatact
    17221 agaaaaatca aataatattt gtcaaacttt aatgcaattt tataaagatg gtaaaagagt
    17281 ggataaagct tataaaggat gcgaaggaac caattatgga catgttcttt ttgaagatgg
    17341 tactaaagaa agcactatag aaacttttaa aaatgcttta aaagagcata atatagaagt
    17401 tgaatttggc tctgaagttg agagtgttaa aaatgaaaat ggagtttttt tggtaagcac
    17461 gggtaaaggt gtttatgagt gtaagaacat tatcattgct ataggcagaa tgggtaagcc
    17521 taataaacct gattataaac ttcctatgac tttaacaaaa attattaatt ttaatgctaa
    17581 ttcagtttta ggaaatgaaa aaattcttgt tgtgggtgga ggaaattcag cagcagagta
    17641 tgctgtagat ctagctaatt caaatcaagt gagcctttgt tatcgtaaaa aagaatttac
    17701 aagattaaat gatatcaatc ttaaggatat taatgaagct ggaaattctg gcaaagtgga
    17761 gttaaagctt ggaattgata ttaatgaagt agaagatgat aatggtaagg ctaaggtgaa
    17821 ttttaccgat ggcacaagtc aaatttatga tagaatcatt tatgctattg gcggttctac
    17881 tccgcttgat tttttacaaa aatgcgggat taatgttgat gataaaggtg tgcctttaat
    17941 ggatgaaaat aaacaaagca atgttaaagg catctttgta gcaggggata ttgctactaa
    18001 aaatggagcg agtatagtta cagggctaaa tgacgctgta aaaattcttt ctgtgcttta
    18061 aaatttagcc cttgggctaa atttatttag tttaatttag aaaattcata tgcaaaataa
    18121 aataaataca aacaaactca ttgctaagct attttattta aattcttaca tattaggact
    18181 tttggcattt tattagcggc ttaaaatatt tttaatttta aatattttaa ggattattat
    18241 gtcaagtatt tttagcactt taagcccttt taggcttttt ataaaatgtg ccgtgccaaa
    18301 tgttataagt atggctttta tttcttttta ttatatagtt gatggaattt ttgttggaaa
    18361 atatctagga agtgatgctt tagcagcttt agctttgatt attccttttg ttatgatgtc
    18421 ttttgctttg gctgatatga tagctatagg atcagcggtg caaatttcta tgtgtttagg
    18481 tttgggtaaa aaaaatttag ccaaaaagat atttagttct agtatgttga ttatttttat
    18541 aatctcctgt tttattggaa ttttggagta ttttttagga cctgttttga ttgattgttt
    18601 aaatgttagt gatgagatta aaacaatgtc taaagaatgc atgtttgttt ttgctttgtt
    18661 tgcacccttt accatgcttt cctttgcttt ggataattat ttaagaattt gtggaaaaac
    18721 tgcgtatagt atggtagtga atgtgattat agcattaagc aatatagcgc ttgattatat
    18781 ttttatagtt gggctgggct gggggttgtt ttcggcagct cttgcgactt gtttaggact
    18841 tattttaggt ggtatttttg gaatttttcc ttttttattt caaaatttag agcttaaatt
    18901 ttcaagttta tatatgaatt taaaaatctt taaaaatatc ctttataatg gaagcagtga
    18961 attttttggc aatatttcag gatctttata cagtattttt gcaaattttg ttttgttaaa
    19021 aatttctacc actcaagctg tggcagcttt ttctatcatt ttatatattg atagttttat
    19081 cattatgctt attattgcta tgggtgatgc aatgcaacct gcgcttagtt ataactatgc
    19141 taaaaaagat tttttaagaa ttaaagccat tgtaaaagta gtattttttg cagggggaat
    19201 tttgtcttta ttttctataa tgcttatatt tatatttgga gaaaatttaa taacactttt
    19261 tacaaaggag aatgatcaag aatttaaaac tttcgcttat acagctttca tgctttttgc
    19321 ttttaattat ttttttgcat ggtttaatgt tttaagtggt tcttttttaa cagcttttaa
    19381 taaagcaaat gtttctttga ttttaagctt ggcaaaaaat ttatttatac ctttgttttt
    19441 tctttggatt ttatcttatt ttataggttt aaatggagta tggctaagcc cattttttgc
    19501 tgaattttgt gttttgattt tagcttggat ttttcttaaa aggattttca aagatctatc
    19561 tttataaaac gatagatctt ttttaaattt tatcaaagga gtttttctga tttttagaat
    19621 ttatatccta tgccggttaa gacaatttga taggtttcat cataaaatcc tatgtcacta
    19681 tttctttttt ctataccata atttgcaaaa ccataaagtc cgttatatcc caaaaattga
    19741 tttttgacaa cttttagatt aagtttaatt atattaccat cttgtttttt atgaaaaata
    19801 ggatctgttc ctactgcatc gtatttacta agatttaaat tcggagtgaa gatataatca
    19861 ttagcaaaag ttaaatttgc tcctatgcta aagccatatc ttgagtagct ttgagctttt
    19921 ccatccgcat cattataatc atagtttaat cctaagttta ataagctata attgtaattt
    19981 aattcaaatt cgtgataata tcccttcctt tttaaggagc tttgtatgat agcatcttta
    20041 tcatatttat ttttactaaa caaatatgaa gcagtgaatt ttccaaaatc actttcgtaa
    20101 agttgagaaa ttttaaaacc atatctatca acgtcggttt cttctctgtt acctatttca
    20161 taaggatttg cataagcttt ttctcttaag gaagaaatta cagaaaaaga agtactaaaa
    20221 cgctctaaat aagctctttc atagcctaaa gttataccac tgatatctct tccattgtag
    20281 tttttaataa aaattctatc attatctata agattaccat agtaaagttc tataccgata
    20341 aaaggaatga aagaggaatc cgaattatca gcattataac tgcttagata atcactgttt
    20401 gccaaggttg aaatattgct tttaatattc cttgcaccta cacctatgct taaatttcca
    20461 ctaaaaccct cttgaaattc cacagccata actgaatgag ttaaaataga gactaaagca
    20521 caagaaaata aatatttttt caaatgttct ccttgaaatt ttgtttttgt aataaaaatt
    20581 acaatttg
//
LOCUS       DAPWAA010000028        20532 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.028, whole genome shotgun sequence.
ACCESSION   DAPWAA010000028 DAPWAA010000000
VERSION     DAPWAA010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20532
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.028"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            25..1026
                     /gene="mltG"
                     /locus_tag="RTF91_000938"
     CDS             25..1026
                     /gene="mltG"
                     /locus_tag="RTF91_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HDZ4943835.1"
                     /translation="MTIPFLSTINKANISTTKNTTIYKIFFFIRNFFLIFILGIFYYL
                     TQPLKSNSVVFIPQGSISQIITYLKQNKYQMSSIDKYILFFLGHPQSGWINIGTKDLN
                     RVEFLHKLTIAKAALETITLIPGETSVIFLEQAAKQLGLDKNILLKEFKAQAPYDEGV
                     FLPETYKIPKGITENLLIQMLLNHAEISNKKTSEKIFGDYNSKKWHQYTIIASVIQKE
                     AANENEMPIIASVIYNRLKKGMKLQMDGTLNYGIYSHVKVTPQRIRQDNSSYNTYKFT
                     GLPKEAVCNVSLSAIRAAIFPLKTDYLYFVRDKNTGVHIFSTNINDHNKAINLQKGK"
     gene            1106..1537
                     /gene="flgB"
                     /locus_tag="RTF91_000939"
     CDS             1106..1537
                     /gene="flgB"
                     /locus_tag="RTF91_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HDZ4943836.1"
                     /translation="MINPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIEF
                     ETALVNRANEIFKKNDNKELQLAITEEGHQKPWKFPDPSKSTIYLRDGHLARNDANTV
                     DLDVETTEMSKNTVMITALDGVLRRQTNIFSSILDASSKLS"
     gene            1547..2041
                     /gene="flgC"
                     /locus_tag="RTF91_000940"
     CDS             1547..2041
                     /gene="flgC"
                     /locus_tag="RTF91_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HDZ4943837.1"
                     /translation="MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRR
                     REVIFKATDFDKLLNEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKD
                     FRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAID
                     LLRG"
     gene            2047..2343
                     /gene="fliE"
                     /locus_tag="RTF91_000941"
     CDS             2047..2343
                     /gene="fliE"
                     /locus_tag="RTF91_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HDZ4943838.1"
                     /translation="MNNINDLRLNNNISNTSKSQNSTGIGDEFAKMLKNEIDDLNKAQ
                     ESGEAAMTDIATGQVKDLHQAAIAITKAESSMKFMLEVRNKAISAYKEITRTQI"
     gene            2350..4152
                     /locus_tag="RTF91_000942"
     CDS             2350..4152
                     /locus_tag="RTF91_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDZ4943839.1"
                     /translation="MQEYKKNRVSKVAFAYCMALLFMIIFISSTFFLTSKRHIPNTEK
                     DQYALALRGLIITKDNFTITSSKQIYRAEIDLRSINKDKFDLFLKLFQIYSGISNDQV
                     ADIKKRIQNQKKRSYNFVLLQNLDSKQASYLKDLAKKLYIQGFFKAFTNNSGRVETRG
                     LNIIEHEEDRIYMSKDSFTPIIGYTKMVLDPESGILKNIGVKGLEKYYDKCLSPVQNE
                     KIQGLKDIGGNIILNLNSLQQKKINGCDLYLNLSLKLQKSIEKAIDQRNEDLKANEII
                     VGVMESKTGRILALASSRRYDPQNRGKDLSVLNASAIEYGYEAGSVIKPFIFTTALRL
                     GKIKMNEVINTHGGSYKLGRFTINDDHKMDKMTMEEVIRYSSNIGMIQIAKRLNNIEI
                     VSGLKIFKFGEKSGIDLPYEQKGEIPNPKRLRDIEKSVLSYGYGLKTTFIQLLAAYNV
                     FNNDGIYITPRLAEKFYQNGRFTNLDDDVKKEKILSSEAAKTMQNVLINVIEKGTGKK
                     AITQGIIAGGKTGTARIAEKQGYTSNRYNASFFGFANDLNHAYTIGVLVRHPTKPYSY
                     YAAQSALPMFKDVVDILINEEFLTPIHNQTSTNN"
     gene            complement(4149..5659)
                     /locus_tag="RTF91_000943"
                     /pseudo
     CDS             complement(4149..5659)
                     /locus_tag="RTF91_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859923.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
     gene            complement(5800..6234)
                     /locus_tag="RTF91_000944"
     CDS             complement(5800..6234)
                     /locus_tag="RTF91_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943840.1"
                     /translation="MLGIYLLIVALSFLVLYFAVKKLTLNIDERTLLEPIKMDIYPKF
                     CDLIDEKIREFKENIQNDNLTLKISSQKDEFLEKLGDLSRELTFIQTINLSNKNDSIW
                     QNELFSFLKELENLLLKYLEKGEEEAENLREFLMNEFEKLKD"
     gene            complement(6234..6551)
                     /locus_tag="RTF91_000945"
     CDS             complement(6234..6551)
                     /locus_tag="RTF91_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDZ4943841.1"
                     /translation="MIENIPASLWIKQDLNAYQIFDVRTPLEWEEGILPNAQCVALYD
                     NQGLLNAKFLDEFQSKRDEGKKLAFICRSGHRSMVAAEFIAEKLGLQSANLDGGMLAF
                     KGC"
     gene            complement(6548..8374)
                     /gene="htpG"
                     /locus_tag="RTF91_000946"
     CDS             complement(6548..8374)
                     /gene="htpG"
                     /locus_tag="RTF91_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDZ4943842.1"
                     /translation="MQFQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLS
                     VSDDKYKSLKFEPKIEIKIDKDKKTLTISDNGIGMDKDDLINNLGTIAKSGTKSFLEN
                     LSGDAKKDSQLIGQFGVGFYSAFMVANKIEVLSKKALDNKAYLWSSDANGYEIDDASK
                     EEQGTSITLYLKDDEFANAYKIESIIEKYSNHIQFPIFMEKEEFTPAKEGEEEGKTEL
                     KISQINKANALWRMQKSSLKAEDYERFYEQNFHDSNKPLLYLHTKSEGKLEYNSLFFI
                     PQNAPFDLFRVDYQSGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREI
                     LQENQILKAVKEASVKKILGELEKLKNNDKEKYLSFFKIFGKVLKEGLYGFGNEKDNL
                     LKLMLYKSTKGENLRSLEEYKNELQNEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEV
                     LLMDDEIDSLVTPMLEFEGLKFVAINQVEDKNELSDEEKNTFAPLVAKFKEFLKDQVE
                     DVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQNFKPILEINPKHAIFTGLKNN
                     ETFSADIATLVLNMAKLSEGMGVDNPAEFNASLTKIINKAFS"
     gene            complement(8715..9407)
                     /locus_tag="RTF91_000947"
     CDS             complement(8715..9407)
                     /locus_tag="RTF91_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HDZ4943843.1"
                     /translation="MIYKRIKALYFWIFFVLSITFVVFCFCFTKSQNTLWKIRKIWAK
                     FQRYTIFYKQEVIGTFNPQAHMILMNHQSALDIIALEELYPKNLCWIAKKELGEIPIF
                     KIAMNKPKLLCIDRKNPRDLMRVLKEAKERLEEGRVLAIFPEGTRSKSDKLLKFQSGA
                     KILSDKLNLKVQPILLIDSAKILDTKSFSAKSGTLKIICMNLVDTSDEKWLENTRKKM
                     QELLDQERLKFC"
     gene            complement(9388..10584)
                     /locus_tag="RTF91_000948"
     CDS             complement(9388..10584)
                     /locus_tag="RTF91_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDZ4943844.1"
                     /translation="MKILLTLILSIVVLFGRGEISVFSGQDENMQKELQKLPQEEQKI
                     YQNIPPSDENNDFESNVDDPFVAKGTLVLTNDEYPNKVYVGEVFPVTIYARTTENTKF
                     DFNISVEKTNLSFLNPDAKWEFINNEYKTTLWFEAKNSNASLSKISIKLLRNNEVFQE
                     ADINLDPIKFENTLSNKDFSHLVASSLEVKKVKASHFDDANIIMMVELSTSNANLKSF
                     FMEGIQKQGIENLKGDFNASSAFYYAILPSSKTNFEFSYFNKDSKKLENINLKLKISD
                     DEISTQSDLNPINKDLNIYKQYALWFLAVLFGVLFVWRKNYIILALAVVCFTLSFLVD
                     TNTQNAIIKTGSRAKILPTEPSTYFYTANTDEKVEILGVRQNYIKVLFSNGKIGWINK
                     DDLQKN"
     gene            complement(10581..11228)
                     /gene="purQ"
                     /locus_tag="RTF91_000949"
     CDS             complement(10581..11228)
                     /gene="purQ"
                     /locus_tag="RTF91_000949"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HDZ4943845.1"
                     /translation="MKIAIIRFPGTNCEFDTAYAFEKLGVKTQIIWHEEKEFDADLVV
                     LPGGFSYGDYLRCAAIAKLAPAMQGVFNHAKKGGYILGICNGFQILLESGLLRGAMKH
                     NSNLSFISKNQNLRVISNDNAFLKNFKKDEIINLPIAHGEGNYYADEVTLKELQDKDL
                     ITLKYELNPNGSVLDIAGICDENKKIFGLMPHPERACEKILGNDVGLKMLKGFLF"
     gene            complement(11230..11475)
                     /gene="purS"
                     /locus_tag="RTF91_000950"
     CDS             complement(11230..11475)
                     /gene="purS"
                     /locus_tag="RTF91_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HDZ4943846.1"
                     /translation="MKVVVNISLKNGVLDPQGKAIEKALYSLNFNNVKEVKIAKQIKI
                     SLDEKDEKLVKEQVKNMCEELLVNSVIEDYELVIEKD"
     gene            complement(11484..12194)
                     /locus_tag="RTF91_000951"
     CDS             complement(11484..12194)
                     /locus_tag="RTF91_000951"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDZ4943847.1"
                     /translation="MTKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNES
                     GKGALNCKISTEIFHLLEKNGIKTHLVETISDTEQVVKKCKIVPIEVIVRNVATGSLT
                     KRLGIKDGTVLPFALVEFCLKDDALGDPFINDEHCLILNLVQDEAQIREIKNMARKIN
                     SILTPFFDNKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQ
                     NLGNVKIAYEEVLKRILN"
     gene            complement(12196..13527)
                     /locus_tag="RTF91_000952"
     CDS             complement(12196..13527)
                     /locus_tag="RTF91_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HDZ4943848.1"
                     /translation="MELILKTKRFFAGLAGFVTTFILCLFVTSHLQAKVDQKEEQVQK
                     RLEALDKLTKTLAIVEQYYVDDQNISDLVDKSLSGLLSNLDAHSSFLNEKDFNDMKIQ
                     TNGEFGGLGITVGMKDGALTVISPIEGTPADKAGIKSGDIILKIDNEATLGINLNDAV
                     DKMRGKPKTQITLTIFRKGATKPFDVTLTREIIKIESVYAKMIENENILYLRVTNFDK
                     NVVDMASKELKKYPNIKGVILDLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASEN
                     QEYKADPKNKISNASLVVLVNGGSASASEIVSGALQDFKRGVIVGENTFGKGSVQQII
                     PINKTEALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFSIKESDLKQHLE
                     SELEKIDKNKKEDKQENKNNKNIIGQKQINDDAQLKSAIDTIKIINIKQRQ"
     gene            13648..13938
                     /locus_tag="RTF91_000953"
     CDS             13648..13938
                     /locus_tag="RTF91_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensing transcriptional repressor"
                     /protein_id="HDZ4943849.1"
                     /translation="MCQEKHTHTHSQKHLKTVCNRLSKTIGHLSAIKRMVENDKDCSE
                     ILIQLAAVKAEVNNTAKVVLKEHLAHCMVHAIEENNTQSIEELNKAIDMFMK"
     gene            14053..16626
                     /locus_tag="RTF91_000954"
     CDS             14053..16626
                     /locus_tag="RTF91_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004276806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDZ4943850.1"
                     /translation="MANIQDFLTDNMLSNLENAASLAIHSKNTEVMPLHLLWALSVDS
                     TSILNQILNKLNISKEALELEIKSRISKLATSSNVSRENIRFSNELINSLENAKGLMS
                     ANGDSYLSVDTWLISESQKSPIKEILTQFLDLREFQKELENLRVGRKIDSKTSDETLD
                     SLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVE
                     ALAQRIIKKDVPKSLQNKKVIALDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILF
                     IDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQ
                     PVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAID
                     LIDEAAAELKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEITKELAN
                     LKEKQNALNSQFENEKSVFDGISTKKKEIDMLKNEASLAKARGEFQKAAELEYGKIPS
                     LEKEVEVLEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQKFLEVE
                     KHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF
                     LFDDEKAMIRFDMSEFMEKHSISRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEV
                     EKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIINLSGKEQEDAV
                     KNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQISLENKGIKASLSENA
                     ALLIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADELNENDSIIIDAQNDEIVIKK
                     V"
     gene            complement(16688..17149)
                     /locus_tag="RTF91_000955"
     CDS             complement(16688..17149)
                     /locus_tag="RTF91_000955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943851.1"
                     /translation="MNKNKNRFAFFKDLEVDEAKNYKCENFFEKLVLIENKIDNNSIF
                     RPIGAKERIYNQLSYKLGKSMIENSKNLKDIIKMPFVLLKIVKAHQREREIYNTMIKL
                     NSNLTLSQLEDYGDYKEALKIKSDLNYQLGRCLIEANKHKWRRGGVSQIAI"
     gene            complement(17416..17757)
                     /locus_tag="RTF91_000956"
     CDS             complement(17416..17757)
                     /locus_tag="RTF91_000956"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943852.1"
                     /translation="MVAFYFSADIFFAGKSKNINIECRSNNAFDNVVLNGWGIVIFSN
                     SVCYIGDNTSFGISVIWISECKNFIMGNDCMLSWNLFFRNTDQHMIYSIDSKERLNNG
                     ESIFIGEYYRE"
     gene            17888..18163
                     /locus_tag="RTF91_000957"
     CDS             17888..18163
                     /locus_tag="RTF91_000957"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943853.1"
                     /translation="MFRYLFLSITCTIVFIGCGIDKNTSLSDLRQQAFEEFVAFQYKE
                     KSDFKDNIKKVVSEYVKDNSLKADLFELNNFTNCVMYNIWQKIQNKP"
     gene            18136..18480
                     /locus_tag="RTF91_000958"
     CDS             18136..18480
                     /locus_tag="RTF91_000958"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943854.1"
                     /translation="MAKNPKQTLELPLKTCTNELNNGELKKINYEDPSWILGQFDTIS
                     GEHYIASKYIKNNLNDPKSYDFMGANYNILSNGSQVLITTEYIAKNLLGGNTKNKTAI
                     LFSNRGEILAVY"
     gene            complement(18522..19168)
                     /locus_tag="RTF91_000959"
                     /pseudo
     CDS             complement(18522..19168)
                     /locus_tag="RTF91_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002803715.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
     gene            19195..20010
                     /locus_tag="RTF91_000960"
                     /pseudo
     CDS             19195..20010
                     /locus_tag="RTF91_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834658.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
     gene            20011..20487
                     /locus_tag="RTF91_000961"
     CDS             20011..20487
                     /locus_tag="RTF91_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDZ4943855.1"
                     /translation="MMIEIKGLENFFKACDNLIDMNKHGQSILTSAGESIRNGIEISF
                     ERESSLFGEKWKPLKNSTLTYKKKKGFSERILHKSGNLSSNWMIEATNNKVEVFNNTQ
                     SKNGFKYGLIHQYGSKKKNIPARPFLPIDNNNVLHKGIRSVIYEDTKDFIVRIVKK"
BASE COUNT         7541 a         3109 c         2800 g         7082 t
ORIGIN      
        1 aaaaaatcaa attggatact agagatgaca atcccatttt taagcactat aaataaagct
       61 aacataagca caacaaaaaa tacaacaata tacaaaattt tctttttcat acgcaacttc
      121 tttttgatat ttattttagg aattttttat tatctaactc aacctttaaa aagtaattct
      181 gtggtattta ttccccaagg ttcaatttct caaattataa catatttaaa gcaaaataaa
      241 tatcagatga gtagtattga taaatatatt ttattttttt taggacaccc tcaatcaggc
      301 tggattaaca taggaacaaa agatctaaac agagttgaat ttttacacaa actcaccatt
      361 gctaaagcag cacttgaaac cattactctt atcccaggag aaacaagtgt aatcttttta
      421 gaacaagcag ccaagcaact tggacttgat aaaaatatac ttttaaaaga atttaaagct
      481 caagcacctt atgatgaagg tgttttttta ccagaaactt ataaaattcc aaaaggcatt
      541 actgaaaacc tactcattca aatgctttta aaccatgctg aaatttctaa taaaaaaacc
      601 tctgaaaaaa tttttggcga ttataattca aaaaaatggc accaatatac cattatcgcc
      661 tctgtaatac aaaaagaagc tgccaatgaa aatgaaatgc ctataattgc gagtgtaatt
      721 tataatcgac ttaaaaaagg tatgaaactt caaatggatg ggactttaaa ttatggaatt
      781 tactcccatg taaaagttac tccacaaaga ataagacaag ataatagctc ttataatacc
      841 tataaattta caggattacc taaagaagca gtttgcaatg tttctttaag tgctattcgt
      901 gcagctattt ttcctttaaa gacagattat ttatattttg tgcgtgataa aaacactgga
      961 gttcatattt ttagcacaaa tataaatgat cataataaag ccataaactt acaaaaagga
     1021 aaataatttt gatattttta cacaaaataa ttaaattgga acagtatttg cttgttaatt
     1081 ttaaaaaata tagaaaggat aaaaaatgat taacccattt aaatcaaaag aactagtcac
     1141 tggtgcttta gcgggcagaa atctaagaaa tcaacttatc aatgctaatc ttgcaaatgt
     1201 tgatactcct ttttataaag caagagatat tgaatttgaa acagctttgg tgaatcgtgc
     1261 aaatgaaatt ttcaaaaaaa atgacaacaa agaactacaa ttagccataa ccgaagaagg
     1321 gcatcaaaaa ccttggaaat tccctgatcc tagtaaatct actatttatt taagagatgg
     1381 acatttagca agaaatgatg caaatactgt tgatctggat gtagaaacca cagaaatgag
     1441 taaaaataca gttatgataa cagctcttga tggagtttta agaagacaaa ccaatatctt
     1501 tagttctata cttgatgcaa gctctaaatt aagttaaagg taaattatgg catacttaag
     1561 tgattttgat attagtggtt acggtttaag tgctcaacgt tttagaatga atgttattag
     1621 ctctaatata gctaatgcaa acactacaag aacagccgaa ggtggacctt atagaagacg
     1681 cgaagtgatc tttaaagcaa cagattttga taagctttta aatgagcaaa ttaacaaaga
     1741 taataatttt ttaaaatatg aaaatccttt aaacgatcca agctcaccag aagaagctaa
     1801 gcctgctatt caaagcgttg tagtagataa agtagttaga gatgacaaag attttcgcat
     1861 gaaatatgat ccaagtcatc ctgatgcaaa tgctgaggga tatgtagcgt atccaaatgt
     1921 aaatcctgtt atcgaaatgg cagatttgat tgaagctaca agagcttatc aagcaaatgt
     1981 aagtgctttt acaagtgcaa aaactatagc tcaaagtgcg attgatttat taagaggata
     2041 ataaaaatga acaatattaa tgatttaaga ttaaataata acatttcaaa tactagcaaa
     2101 agtcagaatt ctacaggaat tggtgatgaa tttgccaaga tgcttaaaaa tgaaattgat
     2161 gatttaaata aagcacaaga aagtggagaa gctgcaatga cagacattgc cacggggcaa
     2221 gttaaagatt tacatcaagc agctatagcc attactaaag ctgaaagtag tatgaaattt
     2281 atgctagaag taagaaataa agcgatcagt gcttataaag aaattacaag aactcaaatc
     2341 taaaccctaa tgcaagaata taaaaaaaat agggtttcaa aagttgcctt tgcctactgc
     2401 atggcacttt tgtttatgat tatttttatc agctctactt tttttctcac ctcaaaacgc
     2461 catataccta ataccgaaaa agatcaatac gctcttgctc taagagggtt gattataacc
     2521 aaagataatt ttaccatcac aagctctaaa caaatttatc gtgcagaaat agaccttaga
     2581 agtattaata aagataaatt tgatttgttt ttaaagcttt ttcaaattta cagcggaata
     2641 agtaatgatc aagtagcaga tattaaaaaa agaatacaaa atcaaaaaaa acgatcttat
     2701 aattttgttc ttttacaaaa cttagactcc aaacaagcaa gctatcttaa agatcttgcc
     2761 aaaaaactct atatacaagg ttttttcaaa gcttttacaa ataactcagg aagagttgaa
     2821 acaagaggat taaatatcat cgaacatgaa gaagatagaa tttatatgtc aaaagattct
     2881 tttactccta ttattggtta tactaaaatg gtattagatc cagaaagcgg aattttaaaa
     2941 aatataggag ttaaaggttt agaaaaatac tatgataaat gcttaagccc tgttcaaaat
     3001 gaaaaaattc aagggcttaa agatataggt ggaaatatta ttttaaatct caattcatta
     3061 caacaaaaaa agatcaatgg ttgtgatttg tatttaaatc tttctttaaa attacaaaaa
     3121 agtatagaaa aagccataga tcaaagaaat gaagatttaa aagccaatga aatcatcgta
     3181 ggagtaatgg aaagtaaaac aggaagaatt ttagctttag caagctcaag gcgctatgat
     3241 ccacaaaatc gtggaaaaga tctatcagtt cttaatgcaa gtgctataga atacggttat
     3301 gaagcaggtt ctgttatcaa accttttatc tttacaacag ccttaagact tggcaaaata
     3361 aaaatgaatg aagtgattaa tacccatggt ggttcttata aattaggacg tttcaccatc
     3421 aacgatgatc ataaaatgga taaaatgact atggaagaag ttataagata ttcttcaaat
     3481 ataggcatga tacaaattgc caaaagactt aataatatag aaatcgtatc aggacttaaa
     3541 atatttaaat ttggagaaaa gagcggtatt gatctacctt atgaacaaaa aggagaaatt
     3601 ccaaatccta aacgcttaag agatatagaa aagtctgttt taagttatgg ttatggactt
     3661 aaaacaacct ttatacaact ccttgcagct tataatgttt ttaataatga tggaatttac
     3721 atcacgcctc gtttagctga aaaattctat caaaatggac gctttacaaa tcttgatgat
     3781 gatgtaaaaa aagaaaaaat tctttctagt gaagccgcta aaacaatgca aaatgtcctt
     3841 ataaatgtta tagaaaaagg aacaggaaaa aaggcgatta ctcaaggtat tattgcagga
     3901 ggtaaaacag gaactgcaag aatagctgaa aaacaaggtt acacctccaa tcgctacaat
     3961 gcatcctttt ttggttttgc aaatgattta aatcacgcct atactatagg agtgcttgta
     4021 aggcacccta ctaaacctta tagctattat gctgcacaaa gtgccttacc tatgtttaaa
     4081 gatgttgttg atattttaat caatgaagaa tttttaacac ctatacataa ccaaactagc
     4141 acaaacaatt agcttgatat atctttagaa aatatcactt caacagcacc tatcttcggc
     4201 aatcttagca gcaaaagttg tatcattaag tattgaaatt ccttcagctg ttgtgatttt
     4261 tctcattgaa ataagatatt caacatgttt aaactcaaag tatcaatttc ttttaaaatt
     4321 tcttttcctt tttgaagatt tttaatgatt aaataaagct tttcatcata ttcaaccact
     4381 ctaatttctt caatacttct taaaagttct cctaaatttg atctaatttt attgtattct
     4441 aaagctagaa attcattaga agaactggaa tattttttaa tatttgcttg aataattttt
     4501 aaatttttag ttgtttcagc taaattttta gctgctattt taaaggtaaa aattttatga
     4561 ttttttactt cgtcattgat ataaacttgt gctttagttg aaaaatcaat aagcctcaaa
     4621 aagaactttt atcctagttt gatacaaata atccaaatct acatttttac taaaccactt
     4681 tttattttct aaaatttttt taaaactttt atcactttgt atatcttttc gactaaaacc
     4741 tatagcatag gcaataatta catagatgtt attacaaaat gctcactttc ttttcttaaa
     4801 gctttaatag ccatatcact aaatttaacc aactactatc aagatacaaa ggtttgtctt
     4861 tatttttatc cttaggagct tttactattt tatttaaaaa agaacaattt gaggagtaaa
     4921 aaatgaaaaa aacacaatat caagtaaatt aaacaaagtg tgaaataatg ctagtttcaa
     4981 agctatatct tctatgttta agacactgga taaaaattaa gaaaatgtat aaaataagta
     5041 caattaaaaa ggctgtacta aaattaaaaa tacaatttgc aaacgctaat tttttttctt
     5101 caatattagt acttaagaag ccaaaatagc cgttacaact cctccaacac tagtgcctaa
     5161 agttgcttgc taaagaattt tcaaaactaa tttgtctagc aagtaaagcc gcaacaataa
     5221 tagccattgt agccatgctt gattgtataa ttcctataag caaagaccta gtccaaaaaa
     5281 caaaaatccc tttcaaacca acaaaatcaa agcaaaaaag atcgattata tgcttaaaat
     5341 tttaaaacca tttttaagat aatctacagc caaaaagaaa aatcctatgc cgataaaata
     5401 taatcaaaag tggaatagct agcatggaaa ttttaatatt tgtcaagcca acaatcagct
     5461 aagaacttgc cgtatttcct aaatttgctc caaaaataat ccctatatac ctgctcgtaa
     5521 taataaaaac taaagttgaa gactgcataa ttaaagtgcc aaaaagtata ctttttatct
     5581 ttatatcggt tgactttgct aaaatttttt caagcaaacc tccactaaaa actttaaaac
     5641 ctatgcctaa attagtcatt ccaataagaa gtattgctac tccagctaaa agattggcaa
     5701 gttatcataa caaactaaaa caaaaattaa gactaaagca aaaatactcc atgaaataaa
     5761 tttaaaatat tttaaagaat ttctttcctc ttgcaatgct taatctttta gtttttcaaa
     5821 ttcattcatt aggaattctc ttaaattttc agcttcttct tcgccttttt ctagatattt
     5881 aagcagtaaa ttttctaatt cttttaaaaa agaaaaaagt tcattttgcc aaatgctatc
     5941 atttttattg cttaaattta tagtttgtat aaaggtcagt tctctgctta aatctccaag
     6001 tttttctaaa aattcatctt tttgactaga aatttttaat gttaaattat cattttggat
     6061 attttcttta aattctctga ttttttcatc aattaaatca caaaatttcg gataaatatc
     6121 cattttaata ggctctaaaa gagttcgctc atctatattt aaagtaagct ttttaacagc
     6181 aaaataaagg actaaaaaag acaaagctac tataagcaaa taaattccta gcattaacaa
     6241 cccttaaacg ctagcattcc gccatctaaa ttagcacttt gaagtcctaa tttttcagct
     6301 ataaattcag ctgcaaccat acttcgatga ccactacggc aaataaaggc aagtttttta
     6361 ccctcatctc ttttgctctg aaattcatcc aaaaatttag catttaaaag cccttgattg
     6421 tcatacaaag ctacgcattg tgcattaggt agaatacctt cttcccattc taaaggagta
     6481 cgcacatcaa agatttgata tgcgtttaaa tcttgtttta tccaaagact tgcagggata
     6541 ttttctatca tgaaaaagcc ttattgatga tttttgtaag gcttgcatta aattcagcag
     6601 gattatccac gcccatacct tcgctcagtt ttgccatatt taaaactaag gtagctatat
     6661 ctgcactaaa ggtttcgttg tttttaagtc ctgtgaaaat agcatgtttt ggattaattt
     6721 ctaaaatagg tttgaaattt tgttcttgcc ccatttgttt taagagctgc tgcatagcaa
     6781 aatcaggttt atttttatca taaactatac aacttggact atcttttaaa cgacttgtta
     6841 gtcttacatc ttctacttga tcttttagaa attctttaaa tttagccaca agtggagcaa
     6901 aagtattttt ttcttcatca cttaattcat ttttatcttc tacttgatta atcgctacaa
     6961 atttcaaacc ttcaaattct aacataggag ttaccaaaga atcaatctca tcatccatga
     7021 gtaaaacttc tatatttttt tgcttatatt cttcaagcaa aggagaagtt ctcaataaac
     7081 tttcattatt tcctgcgata taaaaaattt ctttttgttc gttttgaagt tcgtttttat
     7141 actcttctaa agagcgtaaa ttttcacctt tagtgctttt ataaagcatg agttttaaaa
     7201 gattatcttt ttcattgcca aagccataaa gtccttcttt tagcacttta ccaaagattt
     7261 taaaaaaaga taagtatttt tctttatcat tgtttttaag tttttcaagc tcacctaaaa
     7321 tctttttaac actagcttct ttaacagctt ttaaaatctg attttcttgt aaaatttcac
     7381 ggcttacatt aagtggtaaa tcttccacat caataatccc acgcacaaaa cgcaaataag
     7441 ttggcaaaag ctccttatca tcatcactga taaacacgcg ttttacataa agtttcaagc
     7501 cactttgata atccacacga aacaaatcaa aaggcgcatt ttgaggaatg aaaaataaag
     7561 aattatattc taattttcct tcgcttttag tgtggagata aagcaaaggt ttgtttgaat
     7621 catggaaatt ttgctcataa aatctttcat aatcttctgc tttaagactt gatttttgca
     7681 ttctccatag agcattggct ttattgattt gagaaatttt aagttcggtt tttccctctt
     7741 cttcgccttc tttagcagga gtaaattctt ctttttccat gaagattgga aattgaatgt
     7801 gattggagta tttttctata atactttcaa ttttataagc attagcaaat tcatcatctt
     7861 ttaaatataa agtaatactt gtgccttgct cttctttact tgcatcatca atttcatagc
     7921 catttgcatc agagctccaa agataagctt tattatctaa ggctttcttg ctcaaaactt
     7981 cgattttgtt agcaaccata aaagcagaat aaaaacctac tccaaattgc cctataagtt
     8041 gagaatcttt tttagcatct ccgcttaaat tttctaaaaa gcttttagtt ccactttttg
     8101 ctatggttcc aagattgttg ataagatcgt ctttatccat acctatacca ttgtcactaa
     8161 tagttagagt ttttttatct ttatcaattt taatttcaat tttaggttca aattttaagc
     8221 ttttatattt atcatcactc acacttaaaa aattaagctt atctaaagca tcacttgcgt
     8281 ttgaaatgag ttctcttaaa aaaatttctt tattggaata taaagaatgt atcataagct
     8341 gtaaaagctg attaacttcg gtttgaaatt gcattttgat ttcctttgta tttttttaaa
     8401 gtggtatttt agcaaaaaat acaaattcta aggtaaatct aaaagactta tttaaaaata
     8461 taaaaccaag ccatacagca aataaacaaa gaaaaacatt taaaataata tcaaagtaaa
     8521 attaaaataa tttccacttt gtaaaagaaa caaattttga taagaaaagg tagaaaaatt
     8581 ataaaagctc tataataaaa aacccaaaac actagtaaaa agggttccaa ggctgataga
     8641 ataagaaaaa atattgatga aatttataaa aattattcct ataaatccca aaaaaccaac
     8701 aacaaaaaga atatttaaca aaacttaagt ctttcttgat cgagtaattc ttgcattttt
     8761 tttctggtat tttcaagcca tttttcatcg ctagtatcga ctaaattcat acaaataatt
     8821 ttaagtgttc cgctttttgc gctaaaactt ttagtatcta aaattttagc agaatctata
     8881 agtaaaatag gttgaacttt aagatttaac ttatcactta aaatttttgc accactttga
     8941 aatttaagta gtttatcact tttagatctt gttccttctg gaaaaatagc caaaacccta
     9001 ccttcttcaa gtctttcctt ggcttctttt aaaactcgca ttaaatcgcg tggatttttt
     9061 ctatctatac aaagaagttt tggtttgttc atagcgattt taaaaatagg aatttctcct
     9121 aattcttttt tagcaatcca gcataaattt ttaggatata attcttctaa agctatgata
     9181 tctaaagcac tttgatgatt cattaagatc atatgagctt gtggattaaa agtgccaatg
     9241 acttcttgtt tataaaagat agtatatctt tgaaatttgg cccaaatttt gcggattttc
     9301 caaagtgtgt tttgagattt tgtaaaacaa aaacaaaaaa ctacaaaagt aatgcttaaa
     9361 acaaaaaaaa tccaaaaata aagagcctta attcttttgt aaatcatctt tattaatcca
     9421 gcctattttt ccattagaaa ataatacttt aatataattt tgtcttacgc ctaaaatctc
     9481 tactttttca tctgtatttg ccgtgtaaaa ataagtagaa ggttctgtag gtaaaatttt
     9541 agccctagat ccggtcttga taattgcatt ttgagtatta gtatccacaa gaaaactaag
     9601 tgtaaaacaa acaaccgcta aagctaaaat aatataattt tttctccata caaataaaac
     9661 tccaaataaa accgctaaaa accacagagc gtattgttta taaatattca aatctttatt
     9721 tataggattt aaatcactct gagtactgat ttcatcgtcg ctaattttta attttaaatt
     9781 tatattttca agctttttac tgtctttatt aaaatacgaa aattcaaaat ttgttttact
     9841 tgatggtaaa atagcataat aaaaagcact agaagcatta aaatcacctt ttaaattttc
     9901 aataccttgt ttttgaattc cttccataaa aaaactttta agatttgcat tgcttgtgct
     9961 tagttctacc atcataatga tattagcatc atcaaaatga cttgctttaa ccttcttaac
    10021 ctctaaagaa cttgccacaa gatgtgaaaa atccttatta gataaagtat tttcaaattt
    10081 gataggatca agattgatat cagcctcttg aaaaacttca ttatttctaa gaagtttaat
    10141 agaaatttta ctcaagctag catttgaatt tttagcttca aaccataaag ttgttttata
    10201 ttcattatta ataaattccc attttgcatc tggatttaaa aaagataagt tagttttttc
    10261 tacacttata ttaaaatcaa attttgtatt ttcagtagta cgagcgtaaa tcgtgacagg
    10321 gaaaacttct ccaacatata ccttatttgg atattcatca tttgtaagaa ctaaagtccc
    10381 tttagctaca aaaggatcat ctacattgct ttcaaagtca ttgttttcat cacttggtgg
    10441 aatattttga taaatttttt gttcttcttg gggtaatttt tgcaattctt tttgcatatt
    10501 ttcatcttga ccactaaata cagaaatttc acccctacca aacaatacaa caatactaag
    10561 gattaaggtt agtaaaattt tcaaaataaa aaacctttaa gcattttcaa gcctacatca
    10621 ttgcccagaa ttttttcaca agcacgttca gggtgtggca taagtccaaa gattttttta
    10681 ttctcatcac aaattcctgc gatatcaagt acagaaccat ttgggtttag ttcatatttt
    10741 aaagtgataa gatctttatc ttgcaattct ttcaaagtaa cttcatcagc gtaataattt
    10801 ccttctccat gagcaattgg tagattaata atttcatctt ttttgaaatt tttcaaaaaa
    10861 gcattgtcat tagaaatcac tcttaaattt tggttttttg aaataaaact aagattgcta
    10921 ttatgtttca ttgcgcctct taaaagacca ctttcaagta aaatttgaaa accgttacaa
    10981 atacctaaga tatacccccc tttttttgca tgattaaaaa caccttgcat agccggagca
    11041 agttttgcaa tggctgcgca tcttagataa tccccataag aaaatccacc tggcaaaaca
    11101 accaaatctg catcaaattc tttttcttca tgccaaataa tttgtgtctt tactccaagc
    11161 ttttcaaaag cataagctgt atcaaattca caatttgtcc ctggaaatct aataatagca
    11221 attttcattt taatctttct cgattacaag ctcataatct tcaattacac tatttaccaa
    11281 caactcttca cacatatttt ttacttgttc tttaactaat ttttcatctt tttcatcaag
    11341 agaaattttg atttgctttg ctattttaac ttctttaaca ttgttaaaat ttaaagaata
    11401 taaagctttt tctattgctt taccttgtgg atctaaaacc ccatttttta aagaaatatt
    11461 tacaacaact ttcatatcct tccttaattt aatattcttt ttaaaacttc ttcataagcg
    11521 atttttacat tacctagatt ttgacgaaat ctatctttat ctaatttttc attactaaat
    11581 ttatcccaaa acctacaact atcagggctt atttcatcag ctaaaacaag ttcattatct
    11641 ttggttaagc caagttcgat tttaaaatca atcagtctta aatttttgtt atcaaaaaat
    11701 ggagttaaaa tagaattaat ctttctagcc atatttttaa tttccctaat ttgtgcttca
    11761 tcttgcacta aatttaaaat caagcaatgt tcatcattga taaaaggatc acccaaagca
    11821 tcatctttaa gacaaaattc caccaaagca aaaggtagca ctgtgccatc tttaatacct
    11881 agtctttttg taagagagcc tgttgcaaca ttacgcacta tgacttcaat aggaacaatt
    11941 ttgcattttt taaccacttg ttctgtatca cttatagttt ctactaagtg ggttttaatc
    12001 ccattttttt caagtaaatg aaaaatttca gtgctaattt tacagtttaa cgcacccttt
    12061 ccactttcgt tgcctctttt ttccgcatta aaagcagtta aatcatcttt aaactcgcta
    12121 attaacaaat tctcatcatc ggttttaaag agttttttac cttttccttc gtagagcatt
    12181 tctttttttg tcattttatt gtctttgttt aatatttata attttaatag tatcaatagc
    12241 tgattttaac tgtgcatcat cattgatttg tttttggcca attatatttt tattgttttt
    12301 attttcttgc ttgtcttctt ttttgttttt atctattttt tcaagctcac tttctaaatg
    12361 ttgtttcaag tcactttctt ttatagaaaa accatcttct tgagtattta ctttacctgg
    12421 aaaaacttca atatcaggtt ttacacccac tgcttgaata gtacgtccac ttggaagata
    12481 ataccttgca atagtaagtc ttaaagcttc agttttatta ataggtatga tttgctgaac
    12541 acttcctttt ccaaaggtat tttcgccaac gataacaccg cgtttaaaat cttgcaaagc
    12601 cccacttacg atttcacttg cacttgcact tccgccattt acaagcacaa ccaaagaagc
    12661 gttagaaatc ttatttttag gatcagcttt atattcttga ttttcgctcg caatgcgtcc
    12721 tttttgagaa acaataacac ctttatctac aaataaattt acaagtccta tggcttgatt
    12781 taaaagtccg ccaggattat ttctaagatc taaaataacc cctttgatat ttggatattt
    12841 tttaagttct ttacttgcca tatctacgac atttttatcg aaatttgtaa ccctaagata
    12901 aagaatgttt tcattttcta tcatttttgc ataaacactt tctatcttaa taatttctct
    12961 tgttaatgta acatcaaaag gttttgttgc gccttttcta aagatagtta aagtgatttg
    13021 agtttttggc ttaccacgca ttttatctac tgcatcattg aggttaattc ctaaagtggc
    13081 ctcattgtca atttttaaga tgatatctcc tgactttatc ccagctttat ccgctggcgt
    13141 tccttctata ggagagataa ctgttaaagc accatctttc atacctacag ttataccaag
    13201 tccaccaaac tcaccattgg tttgaatttt catatcatta aaatcttttt catttaaaaa
    13261 agaagaatgt gcatcaagat tgcttaaaag ccctgataaa gatttatcca ctaaatcact
    13321 gatattttga tcatctacat agtattgttc tactatagca agagtttttg taagcttatc
    13381 taaagcttct aagcgttttt gaacctgttc ttctttttga tcaactttag cttgtaaatg
    13441 acttgttaca aataagcaca aaataaaagt agtaacaaag cctgcaagac ctgcaaaaaa
    13501 tcgttttgtt ttcaaaataa gctccatatt tgagttttga tttaaagagt aaattttaat
    13561 aaaaattgct taaaacttcg taaataaatt taaattctta aaaatatgtt aaaatagatt
    13621 aaaaatttca aaaagaaagt taatataatg tgccaagaaa aacatactca cacgcattct
    13681 caaaaacatc ttaaaacagt ttgtaatcgc ttaagcaaaa ccataggaca tctaagtgct
    13741 attaaaagaa tggttgaaaa tgataaagat tgtagtgaaa ttttaatcca acttgctgct
    13801 gtaaaagctg aagttaacaa taccgcaaaa gtagttttaa aagagcattt agctcattgt
    13861 atggtgcatg ctatagaaga aaataatact caaagcatag aagaattaaa caaagctata
    13921 gatatgttta tgaaatagtc taaaattagc tatttatttc attatttaaa aaattttact
    13981 caattaactt gacattatat gactaaagtt atataatagc gactatataa actaaaaata
    14041 ttaaggataa acatggcaaa tatacaagat tttttaaccg ataacatgct ttcaaacctt
    14101 gaaaatgcag catctttggc tatacattct aaaaatactg aagttatgcc tttgcatctt
    14161 ttatgggctt taagtgtaga tagtacaagt attttaaatc aaattttaaa taaattaaat
    14221 atttccaaag aagctttaga acttgaaatt aaaagtagaa tttcaaagct tgcaaccagt
    14281 tcaaatgtaa gccgtgaaaa catacgcttt tctaatgagc ttataaattc attagaaaat
    14341 gccaaaggac ttatgagtgc aaatggagat agttatttaa gcgtggatac ttggctcata
    14401 agtgaaagtc aaaaaagtcc tattaaggaa attttgacac aatttttaga tttaagagaa
    14461 tttcaaaaag agcttgaaaa tctaagagtg ggacgcaaaa ttgatagcaa aacgagtgat
    14521 gaaaccttag atagcttaaa taaatttggc atagatttaa ctttaaaagc aagcgaaggt
    14581 aaactcgatc ctgttatagg tagagaagaa gaaatagaac gcttgatgca aattttaata
    14641 cgtaaaacca aaaacaaccc tatactttta ggtgaaccag gcgttggaaa aacagctata
    14701 gtagaagctt tagcacaaag gatcatcaaa aaagatgttc caaaatcttt acaaaacaaa
    14761 aaagttattg ctcttgatat gagtgcttta atagcgggag caaaatatag aggagaattt
    14821 gaagacagat taaaagcggt agttaatgaa gtgataaaaa gtgaaaatat cattcttttt
    14881 atcgatgaaa ttcataccat agtaggtgca ggagcgagtg aaggtagcat ggatgcggca
    14941 aatattttaa aacccgctct tgcaagaggc gaacttcata ctataggtgc aactacctta
    15001 aaagaatatc gcaagtattt tgaaaaagat gcagccttac aacgccgttt tcaacctgta
    15061 aatgtaggcg aaccaagtgt taatgaagct ttggctatgt taagaggtat aaaagaaaag
    15121 cttgaaattc atcataatgt aactataaat gatagtgctt tagtagctgc agctaaactt
    15181 tcaaagcgtt atatagcgga tcgtttttta cctgacaagg caattgattt aattgatgaa
    15241 gctgcagcag aacttaaaat gcaaattgaa agtgagccaa gttctttaag aaaagtgcgt
    15301 aaagatatag aaaccttaga agttgaaaat gaagccttga aaatggaaaa tgatgagaaa
    15361 aatcaaaaaa gactagatga aatcacaaaa gaattggcta atttaaaaga aaaacaaaat
    15421 gctctaaatt cacagtttga aaatgaaaaa agtgtttttg atggcataag caccaagaaa
    15481 aaagaaattg acatgcttaa aaatgaagct tctttggcta aagctagggg tgaatttcaa
    15541 aaagcagcag agctagagta tggaaaaatt ccaagccttg aaaaagaagt agaagtttta
    15601 gaagataaat ggaaaaaaat gagtgaaaat ggagtcttgc ttaaaaatca agtagatgag
    15661 gatttagttg ctggaatttt aagtaaatgg acaggtatta gcgtacaaaa aatgctaact
    15721 tctgaaaaac aaaaattctt agaagtagaa aagcatttaa aagaaagtgt tataggacaa
    15781 gataaagcct taagtgcttt agcaagagct attaaacgca ataaagcagg acttaatgcg
    15841 gacaataaac ctataggaag ctttttattt ttagggccaa caggagtagg aaaaacacaa
    15901 tcagctaagg ctttagcaaa atttttattt gatgatgaaa aagcaatgat tcgttttgat
    15961 atgagtgaat ttatggaaaa acatagcatt tcaagacttt tgggtgcacc tccaggatac
    16021 ataggacatg aagaaggtgg agaacttact gaagctgtgc gtagaaaacc ttatagcgtg
    16081 cttttgtttg atgaagttga aaaggctcat aaagatgtat ttaatgtgct tttagggatt
    16141 ttagatgatg gcagagcaac cgatagcaag ggtgtaacag tagattttaa aaacaccatt
    16201 atcattttaa cttctaacat cgcttcaagt gctattataa atttaagcgg aaaagaacaa
    16261 gaagatgcag taaaaaatga gttaaaaaat ttctttaaac ctgaattttt aaaccgctta
    16321 gatgatatta tcacctttaa tccacttgga aaagatgaag cttatgagat agttaaactt
    16381 ttatttaaag atttacaaat tagcctagaa aataaaggca taaaagcaag tcttagtgaa
    16441 aatgccgcac ttttaatcgc taaagatggt ttcgatcctg attttggtgc tagaccttta
    16501 agaagggcta tttatgatct catagaagat aaactaagcg atatgatact agcagatgag
    16561 ctaaatgaaa atgatagcat tatcatcgac gcacaaaatg atgagattgt tattaaaaag
    16621 gtttaaatta gaaagaaagt agataatcta ctttcttgtt ttaaaatttt taatcaagta
    16681 ataaatttta aatggcaatt tgagataccc ccccccgccg ccatttatgt ttatttgctt
    16741 caataagaca ccgccctaat tgataattta agtcactttt aatctttaaa gcttctttat
    16801 aatctccata atcttctaat tgagataaag tcaaattaga atttaattta atcatagtat
    16861 tataaatttc tcgttctctt tgatgagctt ttacaatttt caataacaca aaaggcattt
    16921 taattatatc ttttaaattt ttagaatttt caatcatgct ttttcctagt ttataagaaa
    16981 gctgattata aattctttct ttagcaccta taggtctaaa tatcgaatta ttatcaattt
    17041 tattttctat aagaaccaac ttttcaaaga aattttcaca cttataattt tttgcttcat
    17101 caacttccaa atctttaaaa aatgcaaaac gatttttatt tttattcatg taaataaaat
    17161 tataaatgaa tattaatttc tcatatggat tatttaagac atttaaagaa ttttcaataa
    17221 acttgggatt aagaaagcca tctttttcaa aagcaaatac aaaatcatca gaattatact
    17281 tgccatgctg ttctaaaaat tgactagata ctccgataaa atcaggagtg gtccttatcc
    17341 aaaagatttt atttttaacc tctttgcaag gagaaccaac attttgaata ataaatcttt
    17401 ttcgtaacta cgcttctatt ccctataata ctcccctata aaaatacttt caccattatt
    17461 aagtctttct ttgctatcta tactataaat catatgttga tctgtgtttc taaagaaaag
    17521 attccaagat aacatacaat cattacccat aataaaattt ttacattcag aaatccaaat
    17581 tacactgata ccaaaactag tattatcgcc tatataacat actgaatttg aaaaaataac
    17641 aattccccat ccatttaaaa caacattgtc aaaagcattg ttacttctac actctatatt
    17701 aatattttta ctttttcctg caaagaatat gtcggcggaa aaataaaacg caaccataga
    17761 aaaataaaat gatacttttt ggttacattt tatttttcta taaaccttaa acttaaaaat
    17821 aacttttaaa ttttttaatc aatatttttt tagtataata aacaaaaatt tttaggagtt
    17881 aatcaatatg tttagatatt tatttctttc aattacttgc acaatagttt ttattggttg
    17941 tggtatcgat aaaaatacaa gtttaagtga tttaagacag caagcctttg aagaattcgt
    18001 tgcttttcaa tataaagaaa aaagcgattt taaagacaat attaaaaaag tggtgtctga
    18061 atatgtaaaa gataatagcc ttaaggctga tctttttgag ttaaataatt ttactaattg
    18121 tgttatgtat aacatatggc aaaaaatcca aaacaaacct tagaattacc attaaaaact
    18181 tgtactaatg agcttaataa tggggagctt aaaaagatta attatgaaga tcctagctgg
    18241 attttgggtc aatttgatac gattagtgga gagcattata ttgcttcaaa atacataaaa
    18301 aacaatctta atgaccctaa aagctatgat tttatgggtg caaattacaa tattttaagt
    18361 aatggttctc aagttttaat cacaacagag tatatagcca aaaatctatt aggtggtaat
    18421 actaaaaata aaactgccat tttattttct aatcgtggag agattttagc agtctattaa
    18481 aaagattgct aaatgttatt tattttttaa ttcctttaaa gctatataat agaacgcaaa
    18541 acctttcctt gtatgattaa ctcaatttgt gagtctttta agtctatact gtagctttta
    18601 tagtccttat ttacactaat gatatccaaa attttactta ttggatttaa ttgcaaaagc
    18661 ttgaccataa gttgattatc aaaatttaaa atatacaatc catctccttg atattcatgc
    18721 gtttcttcaa atactaccca gctatcaggt agaagcattg gaaccataga atatccatca
    18781 actttaatag cttttaaatt ctttggtgtt gttttaaaaa aagctttact aagctctagc
    18841 atttcaccag tttcatattc ttctaatcct attaattcat taccaccacc agcagaagct
    18901 gaaatattaa gttttggtat agagtaaaaa gtggtacttt ggttgcattt gttagtatta
    18961 tactcatttt tattagtatt attaaaaaat attcatatgg taaattgctg tcttgagaaa
    19021 ttttataaat atatttttca ggaattttac ctctcttctc ccagccagct ataaagctat
    19081 tctctatatt tagatacttt gctagttgat ttttattttt aacacctatt gtttcgaaca
    19141 ttttttgtag tatatttgaa acttccataa aattacaacc tcaataaaaa tactattacc
    19201 aaaaactatc ttaaagactc tgcttttttg cttaagaatg ctttaattca agcaagaata
    19261 catcttttag cttttcgtaa ttcttgtata ttatctaata ttgtcctaaa agcaaaaatt
    19321 attactactg ctatttatac cacttctctt aaagcattat cttttgtttt aggtgggctt
    19381 aataaagttt ttaagcttgt aactattgga gttagagtct taagtgtagc tttgcttacc
    19441 aatcctattg gtcttatctt aggaggtatt gcaatagttg ctggacttat cattgctaat
    19501 tgggataaag ttaaaacttg gtttataagt tttatagaat ggcttaaacc tatatttgat
    19561 cctataataa atatttttaa aggggtttgg caaggtataa gtgatttttt ctatagtatt
    19621 tttggaggaa tatttgagta ttttagcgaa aaactttctt ggattagtaa agctatttca
    19681 tcggtgggtg gttttataaa agatgcatta ggattttttg gatttaatga taatgatgaa
    19741 attaaaataa gcaaaactga gcaaacaaaa gaaaaactta taaatactta tgcttttgaa
    19801 tcgccacaaa caaaaagtaa cacaagctta aatgcttctt caaattttaa taatggcaat
    19861 attaatgtaa gtattaatgg cacttttaat atagccactg aaaatggcaa ttttaatatg
    19921 agtgaatttg ccgctgctat acaaaaaagc gtatttgatg ctttaaaaaa gcaagaacaa
    19981 aacaaaatta atactacaat ttatggatag atgatgatag aaataaaagg acttgaaaac
    20041 ttttttaaag cttgtgataa tttaattgat atgaataaac atgggcaaag cattttgaca
    20101 agtgcgggtg agagtataag aaatggtatt gaaatatctt tcgaaagaga aagtagtctt
    20161 tttggagaaa aatggaaacc acttaaaaac tctactttaa cttataaaaa gaaaaaaggt
    20221 tttagtgaaa gaattttgca taaaagtggt aatttatcaa gtaattggat gatagaagca
    20281 acaaacaata aagtagaagt ttttaataat acacaaagta aaaatggctt taaatatggt
    20341 cttattcatc aatatggtag caaaaagaaa aatatccccg cacgtccttt tttaccaatt
    20401 gataataaca atgtcttgca taaaggtata agaagtgtta tttatgaaga tactaaggat
    20461 tttattgtaa ggattgttaa aaaatgatag caaggaaagc cttagctttc cttttctaaa
    20521 aactagcaaa aa
//
LOCUS       DAPWAA010000029        20280 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.029, whole genome shotgun sequence.
ACCESSION   DAPWAA010000029 DAPWAA010000000
VERSION     DAPWAA010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20280)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20280)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20280
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.029"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            107..379
                     /gene="rpsO"
                     /locus_tag="RTF91_000962"
     CDS             107..379
                     /gene="rpsO"
                     /locus_tag="RTF91_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDZ4943856.1"
                     /translation="MALDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLK
                     IYKKDFSSRLGLLKLVGQRKRLLSYLKRKDYNSYSKLITELNLRDK"
     gene            complement(438..3266)
                     /locus_tag="RTF91_000963"
     CDS             complement(438..3266)
                     /locus_tag="RTF91_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HDZ4943857.1"
                     /translation="MLAPSMGEWIYKTNLFLFGEFGYYYPFSLLILNYFYYKKNYKIE
                     NFKRRELFGFSLAFFSTLLLFSVFYRDFGYILKIIYGIFSVILGHVGSGIFALLLLLF
                     SLILLFPKFAKEILKIELDFTLLLKVEQAFKSLLMRVFGGENEKEYIGKSESVAPKLD
                     ILQDSIYENSQTNEKTKTNNLEQIIKDSNINASKNSITTAKENFEKLKNQILDEIVEI
                     DKQSLKESRSFVYEHSQQVRNFAQKASKTSISLDEDFNFISEEEVDMIPERFLKPKKL
                     EDIKQIDTNKNLDEPSYKRKNIEIPVSKQEIKPKIFTKELELRENFIKKEKLEQEYKA
                     YQNEILENKVKQEIKELEEYDAINSSDIIEGHKYSFNIKTETENLNEINENKNSDKAS
                     NIFEFEPVVEELNHPYIEPTPIKNINEIVVEEKNTFDFIQNVETKINDEKTNDQEIKL
                     QKAVLAKEIAINQALLREIEQGEIEKPKDFTLPPLDFLANPKEHRQEINESEIDKKIY
                     NLLEKLRRFKIGGDVISTYVGPVVTTFEFRPSADVKVSRILNLQDDLTMALMAKSIRI
                     QAPIPGKDVVGIEVPNDEIQTIYLREILQSEVFKNAKSPLTIALGKDIVGNAFVTDLK
                     KLPHLLIAGTTGSGKSVGINSMLLSLLYRNSPKTLRLMMIDPKMLEFSIYNDIPHLLT
                     PVITDPKKAVNALSNMVAEMERRYRLMADVKTKNIENYNEKMKELGGEELPFIVVIID
                     ELADLMMTAGKDVEFYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSRISYK
                     VGQKIDSKVILDAMGAESLLGRGDCLFTPPGTSSIVRLHAPFASEFEIEKVVDFLKDQ
                     QSVEYDESFLKDQQSVGVTTNESFEDEVDELYEEAKRVVLEDGKTSISYLQRRLKIGY
                     NRSANIIEQLTQNGVLSKPDAKGQREIL"
     gene            complement(3375..5627)
                     /gene="flgL"
                     /locus_tag="RTF91_000964"
     CDS             complement(3375..5627)
                     /gene="flgL"
                     /locus_tag="RTF91_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HDZ4943858.1"
                     /translation="MRITNKLNFTNSVNNSMGGQSALYQISQQLSSGLKIQNSYEDAS
                     TYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKALQDMVKLFENFKVKVTQAASDSN
                     SQTSREAIAKELERIKESIVQLANTSINGQYLFAGSQVANKPFDSNGNYYGDKNNINV
                     VTGAGTESPYNIPGWDLFFKADGDYKKQISTNVSFTDNRWDLNKDSDKTKYLTGDSKW
                     QQLIGQGYVKDNGLDPDKDFEYDDSKLDFPPTTLYVQGTRPDGTSFKSAVLVKPEDTL
                     EDVMEDIGALYGNTPNNKVVEISMNDSGQIQITDLKQGNNKLDFHAVAFTPQADDKAE
                     LNNIIEAAQAEGITMDDVTNRVMTAALGNPNNGDITNLNNPVTITINNQNFTIDLKQT
                     DFIKSKMTDTDGNTTNGADYDNVYFEKNGNTVYGNVSQVIKGSNVYATDSTKLSEVMA
                     GDSLNGTTLNLKVSSKGGNSYDVTINLQNSTVSYPNPNNPGQTISFPIVHTDPTTGNS
                     GVVTGSNDITYGQINDIIGMFAADKIPTQSIAATNGKVDANGYNNLQQLMKDSQATVD
                     VSMDYKGRISVTDKLSSGTNIEISLSDSQSGRFPQPPFTTTSLVANGPNFSFSANNSL
                     VIDEPNVDIIKDLDSMIDAVLKGNMRADSESEDPRNTGMQGALKRLDHLADHISKLNT
                     TMGAYHNTIKDVNTRSTFLSVNVQSIKSNVIDMDYGEAMINLMQVQLAYQASLKASTT
                     ISQLSLLNYM"
     gene            5808..5894
                     /locus_tag="RTF91_000965"
     tRNA            5808..5894
                     /locus_tag="RTF91_000965"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5842..5844,aa:Leu,seq:caa)
     gene            5905..5979
                     /locus_tag="RTF91_000966"
     tRNA            5905..5979
                     /locus_tag="RTF91_000966"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5937..5939,aa:Gly,seq:gcc)
     gene            complement(6008..7939)
                     /locus_tag="RTF91_000967"
     CDS             complement(6008..7939)
                     /locus_tag="RTF91_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDZ4943859.1"
                     /translation="MALIDLIEASKKFGDKIVLNEVNFSANEGEKIAIIGKNGEGKST
                     FLKVLLGILPLDSGRVIRQNGKSMAMLSQTVDFNANLSVKEAIKQELAEIYNALQEYE
                     MLYKKLEEDPDNKDYLRKIDALMTLIDSKDAWNIESKIIRVLKEFSLLEYENRIISTL
                     SGGEIRRVGLCILLLKNPDILLLDEPTNHLDVYMTNFLEELLKNSKMCVIFISHDRYF
                     IDAIAHKCVEVEQGKLSVFKGGYANYLEKKTQILQNLAKSHETLLKQLKSEEEWLRRG
                     VKARLKRNEGRKERIFKMREEAKKNPGAIKRLKLEISRAALNFNGEKIANRKKMLFEL
                     KNISKNISDKNLFKDFSTRILQGERIAIVGRNGCGKSTLLKILLGEVKQDSGEIKRGE
                     LKIGYFDQARSLVNSDKSLLEIFCPNGGDRVEVHSKNMHVYGYLKKFLFPKEFLDKSV
                     AFLSGGEKNRVALALLFTKEYDVLILDEPTNDLDIATINILEEYLLSFEGAILLVSHD
                     RYFIDKIATKLYAFERNGYINILHNLYTEYLENEKEIEELDSFVLGFKTQEQNNNQKE
                     KNSKKLSYKENEILKNYPEKIDFLEQKIAKLDQDLSDPSVYQEIGINKLYQELEVMQK
                     ELENLENEYFLVLEKSENL"
     gene            complement(7948..9231)
                     /locus_tag="RTF91_000968"
     CDS             complement(7948..9231)
                     /locus_tag="RTF91_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDZ4943860.1"
                     /translation="MLKTNNVFIVFFVLLALIFGSIFYTFTNSYLNFLLIKQYEQKIK
                     SLDDVLKFSLLEHLNDVNIKDFAKDTRADFIILKNDMKISSIKNPDFFFNLKEGEILI
                     LNSKKILTKSFIYKGYKYIIIVYPRFLDLELFWIKMAISFGVYLLFVFILMLLLGRKI
                     AKSFNKILDFLDSIGSHKVVILEKGVFKEFSLLNEKLLKTKDKILKNAQKNKKQSDKI
                     ALKNTQLASVISAISHELKNPLSVIDLSLEMLKDEKLEDEKLKKELLEKISRQSIKLN
                     ALTHKLNFVFNLNSEALQMQNFDLFFLCEKIIKNPGFERVILQGESTKVKADEFLIEQ
                     VIINLLSNALKYSQKEVILIVRNQKIIVQDFGKGIEEDKLKLITKKFYKIDVKSDNSF
                     GLGLFLVKKILNIHKSYLEISSALGYGSSFSFKLN"
     gene            complement(9225..9887)
                     /locus_tag="RTF91_000969"
     CDS             complement(9225..9887)
                     /locus_tag="RTF91_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDZ4943861.1"
                     /translation="MLKFKILIIEDDVDLNELLVLKLKSSGYEVISLLDFFRVEDLLD
                     NEQIDLLIVDRNLPSGDSLEKIQDLRQQGYKEAVIFLTAKAFHQDLLEGFESGCDDYI
                     CKPFDFNELLLRIKAILKRHKKEEEKLIFGDFILDLPNYEFFYKNQKLEISNLDYELL
                     KCFFENPNTLLTRQFLSESVWKDDTTSDKTINIALTRLRNKFPKLKDHIISVRGVGYK
                     LC"
     gene            complement(9874..11457)
                     /locus_tag="RTF91_000970"
     CDS             complement(9874..11457)
                     /locus_tag="RTF91_000970"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDZ4943862.1"
                     /translation="MKKKIIVCDAILDKGIEILRKAEDIELIEAAKVPKNELMQMLND
                     VEVAITRSSTDVDVNFLNHAKKLKALVRAGVGVDNVDISECSKRGVIVMNVPTANTIA
                     AVELTMAHLLTSARSFVNAHNFLKIERKWEREKWYGIELMNKTLGVIGFGNIGSKVAI
                     RAKAFGMKVLAYDPYISASKITDLDMEQAKSLDEILEKSDFITIHTPKTKETNGMIGK
                     QEIAKMKDGIRLINCARGGLYTEEALCESLKSGKIAWLGIDVFDKEPATSHPLLDFEN
                     VSVTSHLGANTLESQDNIAREACEQALSAARGVAYPNALNLPIKTEDLPLFVAPYIEL
                     VSKMAFLAIQIDKNPIKSIKLEAEGIIGEYANSMLTFAAVGALGGILGEKINYVNAEF
                     VAKEKGVELSCETLPNSGYNNKLTVKIITENSNISVSGTVFNENEQRIVGLNGFKTDF
                     KPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDSFGYALAVVLIDEKVQKE
                     VLDELKQLEACVFVQYVEI"
     gene            complement(11454..11942)
                     /locus_tag="RTF91_000971"
     CDS             complement(11454..11942)
                     /locus_tag="RTF91_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943863.1"
                     /translation="MKKYITISILSILLLILLAIVFTLLWQFKANTNFIPHFTKDTNT
                     QQNIQTQTQDLSWQEELAKWPTRDFTPAAEKFTLYFDADTSELKEKNKYYQLIVGKYD
                     IYSMFCLRQTLNSFNVKYFLLKSGDSPEIFLDTGNEKLIDDIIKELKKYKINTEAKEI
                     WL"
     gene            complement(11942..13612)
                     /locus_tag="RTF91_000972"
     CDS             complement(11942..13612)
                     /locus_tag="RTF91_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDZ4943864.1"
                     /translation="MSEVNKKVQGNIDDYLEEEDFGQLLEAFDKLREEATTEGVIVEI
                     KNDEVYVDIGKKSEGILAINEIQDDNSKLLFNVGDSIKVAVMGSSGGRSLLSHKKALR
                     KEKVIEFIKNYQEDQDDVFTVKVVGKNKGGLIVVDENDVEFFLPKSQYGFKETNNIIG
                     KTFKVKIIKIDKDEQSIIVSRKKILDDERRKRKELINNVAQQEDLIEGIVKKITTYGM
                     FVDVGGVDGLVHYSEISYKGPVNPGTLYKEGDKVSVKVIKYDKERKHLSLSIKAALPD
                     PWSEIKDSLDIGDTIKVIVSNIEPYGAFVDLGNDIEGFLHISEISWDKNIKNPKNYIN
                     KGQEIDVEVIEINPNERRLRVSLRNLLSRPFDEFMKSYKIGDVVEGEIISVTSFGAFV
                     KLGGIEGLLHNEDAFWDRSDKCKDKFSQGDKIKVKIIKIDKENQKISLSIKELSNSPV
                     QEYAKTHKVGDIVKGIIRDIKDFGIFVELSKNVDALIHKEDISASMLENLKIGDDVEA
                     AIVFIDEKKNRIRLSVKNLVRMKEREVLNEINNDDKVTLGDIIKDQLA"
     gene            complement(13724..14557)
                     /locus_tag="RTF91_000973"
     CDS             complement(13724..14557)
                     /locus_tag="RTF91_000973"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDZ4943865.1"
                     /translation="MIIELAKNYGFCFGVKRAIKKAEQIKDAATIGSLIHNNEEISRL
                     QKNFNVKTLENIKALSNEKKAIIRTHGITKQDLEELKKKDIEIFDATCPFVTKPQQIC
                     EQMSKEGYEVVIFGDENHPEVKGVKSYVSTKAYVVLDKKELQDLKLPNKIAVVSQTTK
                     KPEHFMEIVNFLMLRTKEVRVFNTICDATFKNQDAIKELSLKSDVMVVVGGKNSANTK
                     QLFLIAKANCEDSYLIETEEELKKEWFLDKKHCGISAGASTPDWIIQKVIAKIENFEI
                     S"
     gene            complement(14547..15833)
                     /gene="aroA"
                     /locus_tag="RTF91_000974"
     CDS             complement(14547..15833)
                     /gene="aroA"
                     /locus_tag="RTF91_000974"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDZ4943866.1"
                     /translation="MKIYKLETPINTILENIAADKSISHRFAIFSLLTQEENKAQNYL
                     LAQDTLNTLEIIKNLGAKIKQKGSCVNITPPKEILSPNCVLDCGNSGTAMRLMIGFLA
                     GISGFFVLSGDKYLNNRPMRRISKPLAQIGARIYGRDGANLAPLCIEGQNLKAFNYKS
                     EISSAQVKTAMILSAFRTDNVCTFSEVSLSRNHSENMLKAMKAPIKVSDNGLSLEISP
                     LKKPLKAQNIVIPNDPSSAFYFALAAIILPNSQIILKNILLNPTRIEAYKILQKMGAK
                     LEITITQNDFETIGEIKVETSKLNAIEVKDNIAWLIDEAPALAIAFALAKGKSILKNA
                     KELRVKESDRIAVVIENLKLCGIKAKELEDGFEIEGGGDLKSSKIKSYGDHRIAMSFA
                     ILGLLCGVEIDDSDCIKTSFPNFIEILSNLGAKIDY"
     gene            complement(15830..18151)
                     /locus_tag="RTF91_000975"
     CDS             complement(15830..18151)
                     /locus_tag="RTF91_000975"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDZ4943867.1"
                     /translation="MIITKSWLNDWLELEEISLNKITKTLNSIGIEVDRVGVLKAPDK
                     VVVGYVKEKIKHENSDKLSICQVDIGSEILQIVCGATNVDAGQFVAVATKGAIMPNGM
                     EIKEAKLRGVDSCGMLCSSLELGFEKINDGIMLLDDSIGKLELGRALNTYEIFNDELI
                     EVELTPNRGDCLSIYGIARDLATALNLNLKEPKPFKENENVLGIGRILRLAAEKELNG
                     FYNYRAIELKKQIQTNLLLNLRLAQIESLGKNSIENLLNYATHSTGVLFNAYDLSIFS
                     EKDDEFTINLSKQAHGETKVSCKDKLLSFSGIFQNDESRCKNDSKIVIIEANYTDPLV
                     IADAKMYHKDQDEKTLYRSFRGSEPRLNLGMGFLLSILEQIPDLVIYSSSQQILTNKK
                     LSIIPISIESIGDIIGQNIDEDKVLKILKKLGFELILLGEGVVNVKAPLHRPDINNLS
                     DICEEVIRIIGIDNIASKGLKFVEKNRLNSTYKNYIEFLNLRKRAVASGYFESLHYIL
                     DNEEELKRLGFDSIKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELG
                     AVFNSNNQELNRIAFVHSGLREEAKISNKAKPELVQFYDFLLDIKNIIGDFQLKSSKY
                     NILSPYEQADIYLSDVKVGFIGRLHLKIENERDLPKTYICELDLDLIKQDFKIAKPYS
                     KFPAITRDLSVLIPKGFEYNQIKNCIKELNLEILENFRLVDIYSDENLKGFYSITISF
                     SFRDINKTLEDNQVSECMDKILNTLKKLGLDLR"
     gene            complement(18148..19140)
                     /gene="pheS"
                     /locus_tag="RTF91_000976"
     CDS             complement(18148..19140)
                     /gene="pheS"
                     /locus_tag="RTF91_000976"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDZ4943868.1"
                     /translation="MQNFIEQIQKCENLNDLEAIRISVLGKKGILTEGFAKLKELEGE
                     EKKEFAAKLNAQKETFNEAYLVKFKDLENLALEERMKQDALDFNYFDESITTGALHPV
                     MSTMDKIIEYFIALNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFDNKRLLR
                     TQTSPVQIRTMLAQKPPIRMIAPGAVFRRDFDITHTPMFHQVEALVVEEGQKVSFANL
                     KSVLEDFLHYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGKGCRVCKHTGWLEVLG
                     CGIVDPNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDLRLLEQFR"
     gene            19262..19627
                     /locus_tag="RTF91_000977"
     CDS             19262..19627
                     /locus_tag="RTF91_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HDZ4943869.1"
                     /translation="MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIP
                     KKHFKDFQEFKPELMAKMTSFIQELAILLGVDKSGYRLVTNCGKNSGQEVFHLHFHML
                     GGFELPKEKTKKENPQALF"
     gene            complement(19656..20225)
                     /locus_tag="RTF91_000978"
     CDS             complement(19656..20225)
                     /locus_tag="RTF91_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HDZ4943870.1"
                     /translation="MSKKVLIPLAQGFEEAEFIGIADVLKRAGELNTKLDVIIASLNS
                     ELLVKGANGISIKADCFIQSVDIEKLDAIALAGGFEGMMNLKNSSVVLNIIKQLHNKN
                     KIVAAICASPIVLNEAGVLEGEFACYPGCEAGLNGNRVNKAVVVNKNIITSAGPATAI
                     LFGLELAKKLCGDEVYQKLYEGMLLPLTK"
BASE COUNT         6627 a         3569 c         2416 g         7668 t
ORIGIN      
        1 taaattttaa taaaaccttt taaaaaaaat aaattcagtt tattttttgc tttttaagat
       61 agaattacaa tccttattta ttattttacc aatcaggagg tctatcatgg ctttggattc
      121 ggccaaaaaa gcagaaatag ttgcgaaatt cgctaaaaaa ccaggtgata ctggttcaac
      181 agaagttcaa gtagctcttt taactgcaag aattgcagaa cttacagaac atttgaaaat
      241 ctacaaaaaa gacttttcat caagattagg acttttaaaa cttgtaggtc aaagaaaaag
      301 acttttatct tatcttaaaa gaaaagatta taattcttat agcaaattaa tcactgagtt
      361 aaatcttaga gacaaataat ctaaagccct tttttgggct ttcgctttaa aatcttcttt
      421 acaaaaaaag aaaaatctta taaaatttcc ctttgtcctt ttgcatcagg tttgcttaaa
      481 accccatttt gtgtaagttg ttcaatgata tttgcagagc ggttataacc gatttttaaa
      541 cgacgttgca aataagaaat acttgttttt ccatcttcta aaacaactcg tttggcttct
      601 tcataaagct catctacttc atcttcaaag ctttcatttg ttgtaacacc tacgctttgt
      661 tgatctttta ggaaactttc atcatattct acgctttgtt gatcttttag gaaatctaca
      721 actttttcta tttcaaactc acttgcaaaa ggtgcatgca aacgcactat agagcttgtt
      781 ccaggaggag taaataaaca atcgcctctt ccaagcaaac tttcagcacc catggcatct
      841 aagataactt tagaatcaat tttttgccct actttataag aaattctact tggtaaattt
      901 gctttaataa gtcctgttac gacatcaaca gaagggcgtt gcgtggccac aattaaatga
      961 attccacttg ctcttgccat ttgagcaagt cttcctatgt aaaattctac atctttacct
     1021 gcagtcatca ttaaatctgc aagttcatcg atgataacta cgataaaagg aagctcttcg
     1081 ccgcctaatt ctttcatttt ttcattgtaa ttttctatat ttttagtttt tacatcagcc
     1141 attaaacgat agcgtctttc catttcagct accatgtttg aaagcgcatt gactgctttt
     1201 ttaggatctg taataacagg agttaaaaga tgagggatat cattgtaaat gctaaattca
     1261 agcattttag gatctatcat cattaaacgc aaggttttag gtgaattacg atataaaaga
     1321 cttaaaagca tggaatttat ccctacactt ttaccactac ctgtagttcc tgcaatgagt
     1381 aaatgtggaa gttttttaag atcagttaca aaagcattac ctactatatc tttacctaaa
     1441 gctatagtta aaggactttt agcgttttta aaaacttcac tttgtaaaat ttctcttagg
     1501 taaatggttt gaatttcatc atttggcact tctataccta caacatcttt tcctggaatt
     1561 ggagcttgaa tacggattga ttttgccatt aaggccatgg ttaaatcatc ttgtaaattt
     1621 aaaatgcgac ttactttcac atctgcacta gggcgaaatt caaaagtagt taccacagga
     1681 ccaacataag tgcttataac atcaccacct attttaaaac gacgcaattt ttcaagaaga
     1741 ttataaattt ttttatcaat ttcactttca ttgatttctt gtctgtgttc ttttggatta
     1801 gctaaaaaat ctagcggcgg tagggtaaag tcttttggtt tttctatttc accctgctct
     1861 atttcacgta ataaagcttg attaatagca atttctttgg ctaaaactgc tttttgaagt
     1921 ttgatttctt gatcgtttgt tttttcatca ttgattttag tttctacgtt ttgtataaaa
     1981 tcaaaagtat ttttttcttc gacaactatt tcatttatat tttttatagg tgtaggctct
     2041 atataaggat gatttaattc ttctacaacg ggctcaaatt caaagatatt acttgcttta
     2101 tctgagtttt tattttcatt tatttcattt aaattttctg tctctgtttt aatattaaaa
     2161 ctatacttat ggccttctat aatgtcactt gaatttattg catcatactc ttctaattct
     2221 ttaatttctt gttttacttt attttctaaa atttcatttt gataagcctt gtattcttgc
     2281 tctagttttt ctttttttat aaaattttcc ctaagttcaa gttcttttgt gaaaattttt
     2341 ggcttgattt cttgcttgga aactggaatt tcaatatttt tacgcttata acttggttcg
     2401 tctaaatttt tatttgtatc tatttgtttt atatcttcga gttttttagg ttttaaaaaa
     2461 cgttcaggaa tcatatctac ctcttcttct gaaataaaat taaaatcttc atcaagacta
     2521 atactcgttt tgctagcttt ttgtgcaaaa ttgcgtactt gttgggaatg ctcataaaca
     2581 aaacttcttg attcttttaa actttgctta tcaatttcta caatttcatc taaaatttga
     2641 ttttttagtt tttcaaagtt ttccttagct gtagtaattg aatttttact tgcattaatg
     2701 ttactatctt taattatttg ttctaggtta ttggtttttg ttttttcatt tgtttgggaa
     2761 ttttcataaa tactatcttg taaaatatct aattttggtg ctacagactc tgatttacct
     2821 atatattctt tttcattttc tccgccaaat acacgcataa gcaaagattt aaaagcttgc
     2881 tctactttca gcaataaagt aaaatctaat tctattttta aaatttcttt tgcaaatttt
     2941 ggaaacaata aaatcaaaga aaacaacaaa agtaaaagag caaaaattcc actccctaca
     3001 tgtcctaaga ttacagaaaa aattccatat ataattttca aaatataccc gaagtctcta
     3061 taaaatacag aaaacaaaag taaagtggaa aaaaaagcca aagaaaaacc aaaaagttct
     3121 ctacgcttaa aattttctat tttataattt tttttatagt agaaataatt taatataagt
     3181 aaagaaaacg gatagtaata cccaaattcc ccaaataaaa ataaattagt cttataaatc
     3241 cattctccca tgctaggtgc caacatacaa agacaaagat aaaaaataac aagcgtagag
     3301 ctggtaaaaa tggcctcttt tttaatattc tttccttgaa aataaaatca aagccgatta
     3361 taccataaaa aattttacat ataatttaat aagctaagtt gagatattgt tgtactagcc
     3421 ttaagagaag cttgatacgc aagttgaact tgcattaaat tgatcatcgc ttcaccataa
     3481 tccatgtcaa taacatttga tttgatagat tgcacattta cgcttaaaaa agttgaacga
     3541 gtatttacgt cttttattgt gttatgatat gcacccatag ttgtattaag tttactaata
     3601 tgatctgcta aatgatcaag tctctttaaa gctccttgca tacctgtgtt tctaggatct
     3661 tcactttcgg aatctgctct catattacct tttaaaacag catcaatcat tgaatctaaa
     3721 tctttaataa tatccacatt tggctcatca ataaccaaag aattatttgc actaaaacta
     3781 aaatttggac catttgccac caaagaagtt gtggtgaatg gcggttgtgg aaagcgtccg
     3841 ctttgagaat cgctaagaga aatttctata ttagtgcccg aagaaagctt atcagtaaca
     3901 ctgatacgac ctttataatc catacttaca tcaacagtag cttgagaatc tttcataagt
     3961 tgttgtaaat tattataacc atttgcatca acttttccat ttgtagctgc tatactttgg
     4021 gttggaattt tatctgcagc aaacatacct ataatatcat taatttgacc ataagtaata
     4081 tcatttgatc ccgtaacaac tccgctattt ccagttgtag gatcagtatg gactatagga
     4141 aaacttatgg tttgacctgg attattagga ttaggataac ttacagttga attttgcaaa
     4201 tttatagtca catcataaga atttccacct ttagaactga cttttaaatt taaagtagtg
     4261 ccatttaagc tatctcccgc cattacttcg ctaagttttg tggaatcagt tgcataaaca
     4321 ttacttcctt tgataacttg agaaacatta ccataaacag tatttccatt tttttcaaaa
     4381 tatacgttat cataatcagc tccattagta gtatttccat ctgtatctgt cattttgctt
     4441 ttaataaaat cagtttgttt taaatcgatt gtaaaatttt gattattgat tgttatagtc
     4501 acaggattat ttaaatttgt aatatctccg ttattagggt ttcctagtgc agcagtcatt
     4561 accctatttg taacatcatc cattgtgata ccttcagcct gtgctgcttc aatgatatta
     4621 tttaattcag ctttatcatc ggcttgcggt gtaaaagcta cagcatgaaa atcaagttta
     4681 ttgttacctt gttttaagtc tgtgatttga atttgaccac tatcattcat acttatttct
     4741 actactttat tatttggagt attaccataa agagctccga tatcttccat tacatcttct
     4801 aaagtatctt caggtttcac aagtacagcg cttttaaaac tagttccatc aggcctagtt
     4861 ccttgaacat aaagagttgt tggaggaaaa tctagcttac tatcatcata ctcaaaatct
     4921 ttatcaggat ctaaaccatt atctttcaca taaccttgcc cgataagctg ttgccattta
     4981 gaatcccctg tgagatattt agttttatca gaatccttat ttaaatccca acgattatcc
     5041 gtaaagctaa catttgtgct tatttgtttt ttgtagtctc catctgcttt aaaaaataaa
     5101 tcccatcccg gtatattgta tgggctttca gttccagctc cagttactac attaatatta
     5161 tttttatctc cataataatt tccattagag tcaaaaggtt tatttgcgac ttgagaaccc
     5221 gcaaaaagat actgaccatt aatgctagta tttgcaagtt gaactatact ttcttttatg
     5281 cgttctagtt cttttgctat agcctctcga gaagtttgag aattgctatc acttgcagct
     5341 tgagttactt taactttaaa attttcaaaa agtttaacca tatcttgtaa agctttcata
     5401 ctattttgag tcatttcttg agccctacta gttgattctt ttacttgttc taatgtttta
     5461 atctcatact caagacgcgt attatctata taagtgcttg catcttcata tgaattttgt
     5521 attttcaaac ccgaagaaag ttgttgggat atctgatata aagcactttg accgcccata
     5581 gaattattca cactatttgt gaaattaagt ttatttgtaa ttctcatttt ttcctctaaa
     5641 atattaaagt taaaatcttt tcaaacattg ttaataaaca aaagcaataa ctgttccaaa
     5701 aattttaaat tatatatttt tatatcgtct tttagaaaat actttttatt tttaaagtat
     5761 tttttagcct aagaaagtat aattttatct ttaaatctta aaaattagcc cgagtggtga
     5821 aactggtaga cgcgccagac tcaaaatctg gtaagggcaa ccttgtgtcg gttcgagtcc
     5881 gacctcgggc accatttatt ttttgcggga atagctcagg ggtagagcac aaccttgcca
     5941 aggttggggt cgcgagttcg aatctcgttt cccgctccat aaaattaaat tctatcaaat
     6001 cttttattta taaattttca cttttttcca atactaaaaa atactcattt tctaaatttt
     6061 caagttcttt ttgcattact tcaagctctt gataaagctt gttgatacct atttcttgat
     6121 atacacttgg atcagataaa tcttgatcta attttgctat tttttgctct aaaaaatcta
     6181 ttttttcagg atagtttttt aatatctcat tttctttata gcttaatttt ttagagtttt
     6241 tttctttttg attgttattt tgttcttgag ttttaaatcc taaaacaaaa ctatctaatt
     6301 cttcaatttc tttttcattt tcaagatatt ccgtataaag attatgcaaa atatttatat
     6361 atccatttct ctcaaaagcg taaagctttg tcgcgatttt atcaataaaa tatctatcat
     6421 gtgatactag taaaatagcc ccttcaaaac taagtaaata ctcttctagt atattaatcg
     6481 tagctatatc aagatcatta gttggctcat ctaaaatcaa aacatcatat tctttagtaa
     6541 aaagcaaggc taaagcgaca cgatttttct ctccaccgct taaaaaggcg acacttttat
     6601 ctaaaaattc cttaggaaat aaaaattttt ttaaataccc ataaacatgc atatttttac
     6661 tatgaacttc aactctatct ccaccgttgg gacaaaaaat ttcaagtaaa cttttatcag
     6721 aatttaccaa acttctggct tgatcaaaat atcctatttt aagctctccg cgttttattt
     6781 ctccgctatc ttgttttact tctcctagaa gaatttttaa caatgttgat tttccacaac
     6841 catttcttcc cacaatagca atgcgctcgc cttgtaaaat acgcgttgaa aaatctttaa
     6901 aaagattttt atcacttata tttttactta tgtttttaag ctcaaaaagc atttttttgc
     6961 gattggctat tttttctcca ttaaaattta aagctgctct tgaaatttca agttttaaac
     7021 gcttgattgc tccaggattt tttttcgctt cttcgcgcat tttaaaaatg cgttcttttc
     7081 gcccttcatt tcttttaagt cttgctttaa cccctcttct aagccattct tcttcacttt
     7141 ttaattgttt taaaagagtt tcatgactct tagcaaggtt ttgtaagatt tgtgtttttt
     7201 tctctaaata atttgcatag ccacctttaa aaacgctaag tttaccctgc tctacttcta
     7261 cacatttgtg cgctatagca tcaataaaat atctatcatg agaaataaaa atcacgcaca
     7321 tctttgaatt ttttagcaat tcttctaaaa agtttgtcat atatacatct aaatgattgg
     7381 ttggttcatc aagtaataaa atatcagggt ttttaagcaa aagtatacaa agcccaacgc
     7441 ggcgtatttc tccaccgctt aaagtagata taatgcgatt ttcatattca agcaagctaa
     7501 attcttttaa aacgcgtatt attttagact ctatattcca agcatcctta ctatcaatca
     7561 aagtcataag tgcatctatt tttctaagat aatctttatt atcaggatct tcttctaatt
     7621 ttttatacag catttcatat tcttgcaaag cgttataaat ttctgcaagt tcttgtttta
     7681 tagcttcttt tacgcttaaa ttcgcattaa aatcaacggt ttgtgaaagc atagccatgc
     7741 tttttccatt ttgtcttatt actctaccac tatctaaagg aagtatacct aaaagcactt
     7801 ttaaaaaagt agattttcct tctccatttt ttcctatgat agcaattttt tctccttcgt
     7861 ttgcactaaa atttacttca tttaaaacta ttttgtctcc aaattttttt gaagcttcaa
     7921 ttaaatctat aagagccatt tttatcctta attgagttta aagctaaaac tagaaccata
     7981 acctaaagca ctagagattt caagatagct tttatgaata tttaaaattt ttttcactaa
     8041 aaaaagtcct aaaccgaaag aattatcgct ttttacatca attttataaa atttttttgt
     8101 aatcaacttt aacttatctt cttctatgcc ttttccaaaa tcttgtacta ttattttttg
     8161 atttctcact attaagatta cttctttttg gctatatttt aaagcattag aaagcaaatt
     8221 tataatcact tgctcgatca aaaattcatc agctttcacc tttgtgcttt caccttgcaa
     8281 tataactctt tcaaaacctg gatttttgat aattttttca cacagaaaaa aaagatcaaa
     8341 gttttgcatt tgcaaagctt cactattaag attaaaaaca aaattaagct tatgtgtcaa
     8401 agcattgagt ttaatgcttt gacgcgaaat tttttctagc aattcttttt tcaatttttc
     8461 atcttctaat ttttcatctt ttagcatttc taagctaaga tcaatcacac ttaatggatt
     8521 tttaagttca tgggaaatag ctgaaatcac actagcaagt tgggtatttt ttaatgcgat
     8581 tttatcactt tgttttttat ttttttgagc attctttaaa attttatcct tggtttttaa
     8641 aagcttttca tttaacaagc taaattcttt aaacactccc ttttctaata taacaacttt
     8701 atgactccct atagaatcca aaaaatccaa aattttatta aaacttttag ctattttcct
     8761 gcctagcaat aacattaaaa taaaaacaaa tagcaaatac actccaaaac tgattgccat
     8821 ttttatccaa aaaagttcta aatccaaaaa acgagggtaa acaataatga tatatttata
     8881 ccctttataa ataaaactct tagtaagaat tttttttgaa tttaaaatta aaatttctcc
     8941 ttctttaaga ttgaaaaaaa aatcaggatt ttttatagag cttattttca tatcattttt
     9001 taagataata aaatcagccc tagtatcttt ggcaaaatcc ttgatattaa catcatttaa
     9061 atgctctaag agagaaaatt ttaaaacatc atcaagactt ttgatttttt gttcgtattg
     9121 ttttataagc aaaaaattaa gataagagtt agtaaaagta taaaaaatag acccaaaaat
     9181 caaagccaat aaaacaaaaa aaactataaa aacattgtta gtttttaaca taatttatag
     9241 ccaacacccc taacactaat aatatggtct tttaattttg gaaatttatt tctaagtctt
     9301 gttagagcta tattgattgt tttgtcactc gtagtatcat ccttccaaac actttcgctt
     9361 aaaaattgtc tcgtaagtaa ggtatttgga ttttcaaaaa aacattttaa aagctcataa
     9421 tcaagatttg agatttctaa tttttgattt ttataaaaaa attcataatt aggtaaatct
     9481 aaaataaaat caccaaaaat cagtttttcc tcctcttttt tatgacgctt taaaatcgcc
     9541 ttaatgcgaa gtaaaagctc attgaaatca aaaggtttgc aaatataatc atcacaacca
     9601 ctttcaaagc cttcaagtaa atcttgatga aaggccttag ctgtaagaaa aataactgct
     9661 tctttatacc cttgttgtct taaatcttga attttttcta aagaatctcc acttggtaaa
     9721 tttctatcga ctatcaaaag atcaatttgc tcgttatcaa gcaaatcttc aactctgaaa
     9781 aaatctaaca aagatataac ttcatatcca ctggatttaa gctttaagac aagcagttca
     9841 tttaaatcta catcatcttc tataattaaa attttaaatt tcaacatatt ggacaaatac
     9901 acacgcttct aattgtttta gttcatctaa tacttctttt tgaacttttt catcaatcaa
     9961 aacaacagcc aaagcatatc caaaactatc tctaccaagt ctaaaatcag ctatattgat
    10021 atttttagcc gctaaaacag aactgatttt agctataact cctggtatgt ctttgttttt
    10081 aaaaataatc atttttcctt ttggcttaaa atcagtttta aaaccattta atccgactat
    10141 gcgttgttca ttttcattaa atactgttcc tgaaacactg atatttgaat tttcggtgat
    10201 aattttaaca gtaagtttat tattgtaacc actgtttgga agggtttcgc aagacaattc
    10261 aactcctttc tctttggcta caaattccgc gttaacataa ttgatttttt ctcctaaaat
    10321 tccgcctaaa gcaccaacgg ctgcaaaggt tagcatagag tttgcatact caccaataat
    10381 tccttcagct tctaatttaa tgctttttat cggattttta tcaatttgaa tagctaaaaa
    10441 agccatttta gaaacaagct ctatataagg agctacaaaa agtggtaaat cctcagtttt
    10501 aattggtaaa tttaaggcat taggataagc cacacctcgt gccgcactaa gtgcttgttc
    10561 acaagcttct cttgcaatat tatcttgact ttctaaggta tttgctccta agtgagaagt
    10621 aactgaaaca ttttcaaaat ccaaaagagg atgactggtt gcaggctctt tatcaaatac
    10681 atctatacca agccatgcta ttttaccact ttttaaactt tcgcataaag cctcttctgt
    10741 gtataatcct ccacgagcac aatttatcaa tcttatacca tctttcattt ttgcaatttc
    10801 ttgctttcct atcataccat tagtttcttt agtttttgga gtgtgaatgg tgataaaatc
    10861 acttttttct aaaatttcat ctaaactttt tgcttgttcc atgtctaaat ccgtaatctt
    10921 agaagcagaa atatacggat cataggctaa aactttcata ccaaacgctt tagcacggat
    10981 agccactttt gaacctatgt ttccaaagcc tataacccct agcgttttat tcatcaattc
    11041 aatgccatac catttttctc tttcccattt tctttcaatt tttaaaaaat tatgagcatt
    11101 gacaaaactt ctagcagatg ttaaaagatg tgccattgta agttcaactg cagcaatagt
    11161 atttgcagtt ggaacattca ttacaattac tccacgttta gagcattctg aaatatcaac
    11221 attatccaca cctactccag cacgcacaag tgcttttaat tttttggcat gatttaaaaa
    11281 atttacatcc acatctgtag aacttctagt aatagcaact tcaacatcat ttagcatttg
    11341 cataagttca ttttttggaa cttttgcagc ttctataagt tcaatatctt cagcttttct
    11401 tagaatttca atacctttat ctaaaatagc atcacacact ataatctttt ttttcataac
    11461 caaatttcct ttgcttctgt atttatttta tattttttta attctttaat aatatcatct
    11521 ataagttttt cattacctgt atctaagaag atttctggac tatctcctga cttaagaaga
    11581 aaatacttga cattaaaaga atttaaagtt tgccttaaac aaaacataga ataaatatca
    11641 tattttccaa ctataagttg ataatattta tttttctcct taagttcact agtatctgca
    11701 tcaaaatata aagtaaattt ctctgctgct ggggtaaaat cccttgtagg ccattttgct
    11761 aattcttctt gccatgaaag atcttgagtt tgggtttgaa tattttgttg tgtatttgta
    11821 tctttggtaa aatgtggaat gaaatttgta ttagctttaa attgccaaag caacgtaaaa
    11881 acaatagcaa gcaaaatgag taataaaata ctcaaaatgc ttattgtaat atattttttc
    11941 atcaagctaa ctgatcttta ataatatcac ctaaagttac tttatcatca ttgttaatct
    12001 cattaagtac ttctctttct ttcattctaa caagattttt aacacttagg cgaattctat
    12061 ttttcttttc atcaataaaa actatagcag cttcaacatc atcgccaatt tttaaatttt
    12121 caagcatgga ggcacttata tcttctttgt gaattaaagc atcgacattt ttacttaatt
    12181 ctacaaaaat accaaaatct ttaatatcac gaataatacc ttttacaata tcaccaactt
    12241 tatgagtttt agcatattct tgtactggag aattacttaa ttcttttatg cttaatgata
    12301 ttttttggtt ttctttgtct atcttgataa tttttacctt gatcttatct ccttgagaga
    12361 atttatcttt gcatttatca cttctatccc aaaaagcatc ttcattatgt aacaaacctt
    12421 caataccacc aagtttaaca aatgcaccaa aagaagttac tgatataatc tctccttcaa
    12481 ccacatctcc gattttataa gatttcataa attcatcaaa aggtctagaa agtaaatttc
    12541 ttaaagatac ccttaagcgc ctttcattcg gattgatttc aattacttca acatcaattt
    12601 cttgaccttt attaatatag ttttttggat ttttaatatt tttatcccaa gaaatttcgc
    12661 taatatgtaa aaatccttct atatcatttc ccaaatctac aaaagcaccg taaggttcta
    12721 tgtttgatac tattacttta atagtatcac ctatatcaag actatcttta atctcactcc
    12781 atggatcagg caaggctgct tttatagata aagacaaatg cttgcgttct ttatcatatt
    12841 ttataacttt aactgaaact ttatcgcctt ctttataaag tgttccagga tttacaggtc
    12901 ctttgtaaga aatttcactg taatgaacaa gtccatcaac acctcctaca tctacaaaca
    12961 taccataagt ggtaattttc ttcacaatac cttcgattaa atcttcttgc tgtgctacgt
    13021 tattgatcaa ctctttacgt tttcttcttt catcatctaa aattttttta cgagaaacaa
    13081 taatactttg ctcatcttta tctattttaa taattttaac tttaaatgtt ttacctataa
    13141 tattatttgt ttctttgaaa ccatattgag attttggtaa gaaaaattca acatcatttt
    13201 catcaacaac tatcaatcca cctttatttt ttccgacaac ttttacggta aaaacatcat
    13261 cttgatcttc ttgatagttt ttaataaatt caataacttt ttcttttctc aaagcttttt
    13321 tatgagaaag caaagatctg ccaccactag aacccataac agcaacttta atgctatcac
    13381 ctacattaaa caataacttg gaattatcgt cttgtatttc attaatagcc aaaatacctt
    13441 cggatttttt acctatatcc acataaactt catcattttt gatctctaca atcacaccct
    13501 ctgttgtagc ctcttctctt aatttatcaa aagcctctaa aagctgtcca aaatcttctt
    13561 cttcaagata atcgtctata ttgccttgaa cttttttgtt cacctcgctc attatggtcc
    13621 tttaaaataa tttttagaaa ttgattgatt ttaccttatt tttctttaat tagtgttaat
    13681 tttttaaatt tttgactttt ttattctata ttaaaaacat tctttaacta atttcaaaat
    13741 tttctatttt agctataact ttttgtataa tccaatcagg agtactagca cccgcactga
    13801 taccacaatg ttttttatct aaaaaccatt ctttttttaa ctcttcttca gtttcgatta
    13861 gataactatc ttcacaattg gcttttgcaa tcaaaaaaag ttgctttgta ttagctgagt
    13921 ttttaccccc tacaacaacc ataacatcac ttttaagcga gagttctttg atagcatctt
    13981 gatttttaaa agttgcatca catatagtgt taaaaactct tacttcctta gttctaagca
    14041 ttaaaaaatt tactatttcc ataaaatgtt caggcttttt agttgtttgg cttactacag
    14101 ctattttatt aggaagcttt aaatcttgaa gttctttttt atctaaaact acataagcct
    14161 tggtgcttac ataacttttt actcccttaa cttcaggatg attttcatct ccaaaaataa
    14221 caacttcata gccttctttg ctcatttgct cacaaatttg ctgcggcttt gtaacaaaag
    14281 gacaagtagc atcaaaaatt tctatatctt tttttttcaa ttcttctaaa tcttgctttg
    14341 taatgccatg agttcttatg atagcttttt tttcattact taaagctttt atattttcta
    14401 aagtcttgac attaaaattc ttttgcaaac gagaaatttc ttcattattg tgaataagag
    14461 agcctatagt tgcagcatct tttatttgtt ctgctttttt aatagccctt ttaacaccaa
    14521 aacaaaagcc gtaatttttt gccaattcaa taatcaatct tagctcctaa atttgataaa
    14581 atctctataa aatttggaaa agaagttttt atacaatcac tatcatcaat ctcaactcca
    14641 caaagcaaac ctaaaatagc aaaactcata gcaatgcggt gatccccata gcttttaatt
    14701 tttgaagatt taagatcacc tccaccttct atttcaaaac catcctcaag ttctttagct
    14761 ttaataccgc aaagctttag attttcaatc accacagcaa tcctatcact ttctttaaca
    14821 cgaagttctt tagcattttt aaggatggat ttgcctttgg ctaaagcaaa agctatagcc
    14881 aaagcaggtg cttcatctat aagccaagca atattatcct taacttctat ggcattaagt
    14941 ttgctagttt ctaccttaat ctcaccaatg gtttcaaaat cgttttgagt tattgttatt
    15001 tcaagttttg cacccatttt ttgtaaaatt ttatacgcct ctatgcgagt aggattaagt
    15061 aaaatatttt ttaaaataat ttgagaatta ggcaaaataa tggccgctaa agcaaaataa
    15121 aaagctgaag aaggatcatt gggaataact atattttgag cttttaaagg ttttttcaaa
    15181 ggacttattt caagacttaa gccattatca ctgaccttta taggagcctt catggccttt
    15241 aacatatttt cactatgatt tctactaaga gaaacttcgc taaaagtgca tacattatca
    15301 gttctaaaag cggataaaat catagctgtt ttaacttgag ctgaagaaat ttcactttta
    15361 tagttaaaag cttttaaatt ttgaccttct atacaaagtg gagctaaatt tgctccatct
    15421 cttccataaa ttctagctcc tatttgcgca agtggcttgc ttattcttct catgggacga
    15481 ttatttaaat acttatctcc acttaaaaca aaaaaaccag aaattcctgc caaaaagcct
    15541 atcatcaaac gcatagcagt ccctgaattt ccacaatcta aaacacaatt tggagataaa
    15601 atttctttag gaggtgtaat gtttacacaa gagccttttt gtttaatttt agccccaaga
    15661 ttttttataa tttcaagagt atttaaagta tcttgagcca aaagataatt ttgagcctta
    15721 ttttcttctt gtgtcaaaag cgaaaatata gcaaaacgat gcgatatact tttatctgct
    15781 gctatatttt caagtatagt atttatcgga gtttctaatt tgtaaatttt catcttaaat
    15841 caagacccaa ttttttaaga gtatttaaaa ttttatccat acattcactt acttgattat
    15901 cttctaaagt tttatttata tccctaaaag aaaaacttat agtaatgcta taaaatcctt
    15961 taagattttc atcgctataa atatcaacta aacgaaaatt ttcaagtatt tctaaattca
    16021 attctttaat acaattttta atttgattgt attcaaaacc cttaggtatt aacacgctaa
    16081 gatctctagt aatagctggg aatttggagt aaggtttagc tattttaaaa tcttgcttga
    16141 ttaaatctaa atcaagttca caaatatatg tttttggtaa atctctctca ttttctattt
    16201 ttaaatgtaa acgacctata aaacctactt taacatctga gagataaata tctgcttgct
    16261 cataaggact taaaatatta tattttgatg attttagttg aaaatcacct ataatatttt
    16321 taatgtctaa aagaaaatca taaaattgca ccaactcagg ttttgctttg ttagaaattt
    16381 tagcttcttc tcttaaacca gaatgaacaa atgcaatacg atttaattct tgattattac
    16441 tattaaaaac agctccaagt tcaaaaagtt taataatttt tttagaattt tttgcattta
    16501 aacttgctgc atttaacaaa tgatttaaaa gagttgttct taaagtgtta agctccgctg
    16561 taattggatt gataagtttt agtttaatag aatcaaaacc taatctttta agctcttctt
    16621 cattgtctaa aatataatgc aagctttcaa aatagccgct agctactgct ctttttctta
    16681 aatttaaaaa ctcaatataa tttttatatg tagaatttaa acgatttttt tctacaaatt
    16741 tcaaaccctt agaagcaata ttatcaatac ctataattct tataacttct tcacaaatat
    16801 ctgataaatt gttaatatca ggacgatgta aaggtgcttt aacattgaca accccttcgc
    16861 ctaaaagtat gagttcaaaa cctaattttt ttaatatttt taacacttta tcttcatcaa
    16921 tattttgccc tattatatca ccaatgcttt caatgcttat tggtataatt gataattttt
    16981 tattggttaa aatttgttga gaagaactat aaataacaag atctggaatt tgttcaagaa
    17041 tactaagtaa aaaacccatt cccaaattta gcctaggctc acttcctcta aaacttctat
    17101 aaagtgtttt ttcatcttga tctttgtgat acattttagc atctgcaatt actaatggat
    17161 cggtatagtt agcctcaata ataactattt tagaatcatt tttacacctg ctttcatcat
    17221 tttggaaaat tccactaaaa cttaaaagtt tatctttgca ggatactttt gtttctccat
    17281 gtgcttgttt gcttaaatta atagtaaatt cgtcatcttt ttcagaaaaa atacttaaat
    17341 cataagcatt aaaaagaaca ccggttgaat gtgttgcata atttaataaa ttttctatag
    17401 aattttttcc taagctttca atttgagcaa gccttagatt aagcaataaa tttgtttgaa
    17461 tttgtttttt tagttctata gcacgataat tgtaaaatcc attaagttct ttctctgcgg
    17521 ctaaacgcaa aattctacca atacctaaaa cattctcatt ttctttaaat ggttttggtt
    17581 cttttaaatt taaatttaaa gccgtagcta aatcacgagc aataccataa atacttaaac
    17641 aatcgcccct attaggagta agttctactt ctatcaactc atcattgaaa atttcataag
    17701 tatttaaagc cctaccaagt tctaactttc ctatactgtc atctaaaagc ataattccat
    17761 cattaatttt ttcaaaacca agttctaaac tagaacaaag cataccacaa gaatcaaccc
    17821 cgcgtaattt tgcttctttt atttccatac catttggcat gatagcacct ttagttgcaa
    17881 cagctacaaa ctgcccagca tcaacattgg tagcaccgca gacaatttgc aaaatttcac
    17941 ttccgatatc aacttgacag atgcttaatt tatctgaatt ttcatgtttg attttttctt
    18001 taacataacc tacaacaact ttatccggcg cttttaaaac accaacccta tcaacctcta
    18061 tgcctataga atttaaagtc ttagttattt tatttagact tatttcttca agttctaacc
    18121 aatcattcaa ccaactttta gtaattatca tctaaattgc tccaataatc tcaaatcacc
    18181 ttcaaataaa gaccttaaat ctggaatttg atgtaaaagc attgcaaaac gttctactcc
    18241 gagtccaaaa gcataaccac ttacattttc atagcctaca aaattataaa cattaggatc
    18301 aactattcca catcctaaaa cttcaagcca gcctgtatgt ttacaaaccc tacaaccttt
    18361 tcctttgcaa aatacacaag aaatatcaac ttcagcagaa ggctctgtaa atgggaaaaa
    18421 acttggacga aaacgaactt tcacatctcc aaacatataa tgcaaaaaat cttccaatac
    18481 actttttaaa ttcgcaaagc taactttttg tccctcttct actacaagag cttcaacttg
    18541 atgaaacata ggggtatgag taatgtcaaa atctcttcta aatacagcgc caggagctat
    18601 cattctaata ggaggttttt gtgcaagcat tgttcgtatt tgtacaggtg aagtttgagt
    18661 tcttaaaagt cttttattat caaaataaaa agtatcttgc atatctcttg caggatgaga
    18721 cttgggtaaa tttaatgctt caaaattatg aaaatcatct tctattaaag gacctttttc
    18781 tatgctgaaa tttaaagcta taaaatactc tatgatttta tccatggtac tcataacagg
    18841 atgcaaagct cctgttgtaa tactttcatc aaaatagtta aaatccaaag catcttgttt
    18901 cattctttct tctaaagcaa gattttccaa atctttaaat ttaactaaat aagcttcatt
    18961 gaatgtttct ttttgtgcgt ttagcttagc agcgaattct tttttttcct caccttctaa
    19021 ctctttaagc tttgcaaagc cttctgttaa aatacctttt tttccaagaa cggaaatcct
    19081 aatggcttcc aaatcattta aattctcaca tttttgaatc tgttctataa aattttgcaa
    19141 ttttcttacc ttaaataaaa tatttcaagt tcaattctat taaaaactat tttaaattca
    19201 gcataaaaac caaactttaa agatataatt gtatcaaacc aacactaaaa aaggataaat
    19261 aatgcaagaa aaaacaattt ttgaactcat agttgaaggt aaacttccat gcaataaagt
    19321 gcttgaaagt gacgattttc tagcatttca tgatattgca cctaaagcac ctatacatat
    19381 acttataatt cctaaaaaac attttaaaga ttttcaagaa ttcaaaccag aacttatggc
    19441 aaaaatgacg agttttatac aagaattagc tattctttta ggtgtagata aaagcggata
    19501 tcgtttagta acaaactgtg gaaaaaatag cggacaagaa gtttttcatt tacattttca
    19561 tatgcttgga ggctttgaat tgcctaagga aaaaacgaaa aaagaaaatc ctcaagcttt
    19621 attttaactt aaatggtaga agaaaactac cattgttatt ttgttaaagg taataacatt
    19681 ccctcataca atttttgata aacttcatca ccacatagtt ttttagctaa ttctaaacca
    19741 aaaagaattg ctgtggccgg gcctgcagaa gtgataatat ttttatttac aactacagct
    19801 ttattgacac gatttccatt aagcccagct tcacaaccag ggtagcaagc aaactcaccc
    19861 tctaaaacac ctgcttcatt taagactata ggagaggcac agattgcagc aacaatttta
    19921 tttttattat gaagttgttt aataatattt aaaacaacac tcgaattctt aagattcatc
    19981 ataccctcaa agccacctgc taaagcaata gcatctagct tttctatgtc aacactctgt
    20041 ataaaacaat ccgcttttat actaatgcca ttagcacctt ttactagtaa ttcactgttt
    20101 aatgaagcta taataacatc taattttgta tttaactcac ctgctcgttt taaaacatct
    20161 gcaattccta taaattcagc ctcttcaaaa ccttgcgcca atggaatcaa tactttttta
    20221 ctcattttgt tctccttttt tatacttttt aaatctttct tctctttctt tgtttttttg
//
LOCUS       DAPWAA010000030        18995 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.030, whole genome shotgun sequence.
ACCESSION   DAPWAA010000030 DAPWAA010000000
VERSION     DAPWAA010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18995)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18995)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18995
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.030"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..445
                     /locus_tag="RTF91_000979"
     CDS             <1..445
                     /locus_tag="RTF91_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943871.1"
                     /translation="FDLPKTGAFDNEIKELKEIKYDFKDFNIAFYGFNACDTLKSKLK
                     AKFISYENSIKNNGFTLLNLNPTLSYEMAADIVLDAYDSGADFIVVKEEKDFYLFDTC
                     AKKLMQTSGREFEDFYILSRFEFLALIQGIQAPSLKNHTLKVSLI"
     gene            442..825
                     /locus_tag="RTF91_000980"
     CDS             442..825
                     /locus_tag="RTF91_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDZ4943872.1"
                     /translation="MKISLECKDLIIEKTLELFLKDHLVMKKDCDFIISDEKIHIAKP
                     LFIISKNSPFLSIPFSKEALFESLNEFDNALKAAALQLALEQKRLLEKKIDAIAFEFK
                     KDYENKIDLAIKDLKNKLIKALNDE"
     gene            818..1501
                     /gene="rsmD"
                     /locus_tag="RTF91_000981"
     CDS             818..1501
                     /gene="rsmD"
                     /locus_tag="RTF91_000981"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002899073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HDZ4943873.1"
                     /translation="MNDEFISVKDFFNHNEKKEKILQKQEINSPKEKTKKTKETKLYT
                     SIESGKYKGKKLLLPSLTTTRSTKSIVKSCVFNVIRENLRDKIFIEAFGGSALMAAEA
                     LSNYALKAYAIELDTKAYKIALENAKNININLEVIHANTFEILPKLIKNSKNEIILYL
                     DPPFDIREGFSNIYEKIYHFLENLHLKTLKLIIFEHHSTIKTPEKIQNFQKTKEKKFG
                     STSLSFYTF"
     gene            1560..2606
                     /locus_tag="RTF91_000982"
     CDS             1560..2606
                     /locus_tag="RTF91_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HDZ4943874.1"
                     /translation="MRVLTIFLLFMTSIFSVQIKDVANTVGVRDNQLIGYGLVVGLNG
                     SGDGTSSKFTLQSISNLLQGMNIKVDPNDIKSKNTAAVMVTAKLPAFAKSGDKLDITV
                     SSMGDAKSLQGGTLLLTALRGIDGEIYAIAQGSISTGGLTPRPGGAGSHSTAAIVMGG
                     ANVEREIPQNFSQNNDLTLSLKVADFKTANDIERVLNTVFGEEVAKAIDSRTIRLKKP
                     EDLSNVDFMARVLEQDIAYKPQSKVIIDERTGTVIAGVDVEVEPVLITHKDITIKIDP
                     NNNAVANQNEIDMKDGGFVDPSSNTLRINNAKSTVANIARMLNKLGATPNDIIAIMEN
                     LKRAGAINADLEII"
     gene            2606..2947
                     /locus_tag="RTF91_000983"
     CDS             2606..2947
                     /locus_tag="RTF91_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943875.1"
                     /translation="MKVDNFLNTYSMNSTLLDRAAKARGLELSIKINDNDIVTKTKED
                     EALKEQTDAFEAFFLKQVLDVSLKNQNSLFGKDASDEIYSSMYNDTMSKALSGSMGFS
                     KLLYDFLKERG"
     gene            3010..3207
                     /gene="flgM"
                     /locus_tag="RTF91_000984"
     CDS             3010..3207
                     /gene="flgM"
                     /locus_tag="RTF91_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HDZ4943876.1"
                     /translation="MINPIQQSYVANTTLNTNKIDKETKTNDTQKTENDKASKIAEQI
                     KNGTYKIDTKATAAAIADSLI"
     gene            3248..3682
                     /locus_tag="RTF91_000985"
     CDS             3248..3682
                     /locus_tag="RTF91_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlgN"
                     /protein_id="HDZ4943877.1"
                     /translation="MLKQRLDEVNAILAKLIALTEEDIENIKVAKHESVTPSVEEKNK
                     LIAEFITAKKQLDVALVELNNSSTKGLSELLDDEDKQKLDLLKKNLQNLHNKNKEYAK
                     FVLIVKDFLDGLVNKMFDINDGTNNAYGDKKTNPESIFKINV"
     gene            3692..5518
                     /gene="flgK"
                     /locus_tag="RTF91_000986"
     CDS             3692..5518
                     /gene="flgK"
                     /locus_tag="RTF91_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HDZ4943878.1"
                     /translation="MGIFGTLHTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQT
                     TNGYITTGGVQVGTGTAVESIVRLHDEYSYYKLKGASNQLEYTKYMASTLQEIAQRFP
                     DLQNTGILKNLENYNKAWNDFASNPNENATKITLVKASQTLTESINNTFTTLDKIQKK
                     VDNDIKNTVNEINKIGEEIAIINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAV
                     ASKNEINQDNRLDTTITDPRHQYNLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYET
                     PDEKVRDLTAKINGGQLGAQLDLRGRNYSKNEGKYEDGIIQGYMDSLDTFAKTMINET
                     NNLYASSAKSSVTSDYLSGLKGDIPLVNYDRTIQPGSFDIIIYDDKGDKKLTKTITID
                     VNTTMNDIMSQINANTDDNNNKNSNDDVDDHINASFSYDAKTGDGLFQINAKSGFKVA
                     IEDKGTNFAGAFSIGGFFSGTDASDIKVKDSILNDPSTVRASSNGVDSGNDMANKIIQ
                     LQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNLSNETLYNSVYSEYQS
                     KSGVNTNEELAALIQYQSSYGAAAKIVSTVNQMLDTLLGLKS"
     gene            5533..6312
                     /locus_tag="RTF91_000987"
     CDS             5533..6312
                     /locus_tag="RTF91_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HDZ4943879.1"
                     /translation="MKNFIQLKTKLDFLANQKNTIHSLFETPDPLQIAKIHNDEFIAL
                     LCALFAYGNAKNIVNFLKKLDFSLLSLQEELIKKELKGLKYRFQNERDIQEIFITLSR
                     LKNEISLHELFNQAYQKRENTTDAILAFMQKIKTLNSYSSYGYDFFFGKIWQSTPTSP
                     LKRYNMYLRWMVRKDKLDLGLFTKIHTKNLLIPLDTHTHKISLTLGLLKRKIYDYKSV
                     LELTQNLKKLDANDPIKYDFALYRLGQNKEIDKFIRNENGL"
     gene            6302..7066
                     /locus_tag="RTF91_000988"
     CDS             6302..7066
                     /locus_tag="RTF91_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDZ4943880.1"
                     /translation="MGFEHLDTIYYFILFVVALFAGFIDSIVGGGGLITLPALIACGI
                     PAHLSLATNKLQSVFGSFTATLTYFKSTTLPHLAWGIFFTAIGAGIGSYGVLFVKDEQ
                     LKLIILIFLTLTFLYTALRPNLGKHESKPKLKNIKIFHLICGLTLGFYDGFLGPGTGS
                     FWIFACVMLLGFNMRKASINTKILNFTSNIIALAIFLWQYELLWAIGLLMGIGQVLGA
                     YLGSKLVLKTNGKFIKTLFLIVVGATIIKVAWDYFN"
     gene            complement(7063..8241)
                     /locus_tag="RTF91_000989"
     CDS             complement(7063..8241)
                     /locus_tag="RTF91_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDZ4943881.1"
                     /translation="MKFYEVEFLKNNQNYKKTIKAENLNTAQTKALSKNWKIINIKEI
                     QKSNFQRLKDENFILFFKELALLCEVGLSVQEAIKELYLMHSCKIMKKILDNLILAQS
                     LNQAFENANFGLNRAELALIKTAENTGKISEIFSQISKLREKSMENQKQLKKALRYPT
                     LVFLGIIGAFLFLMLFVVPNFKDLFENLDANLPFITHAMLEIYNFLDTYGIFCTSLLV
                     VFIFMTVLAYKNFYSFAFSYDFLLLKIPLLSRLILYNQNYYFFMVFSLLLKNGISISK
                     AFDLAIMGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSLVFSMLNVAMKSGKL
                     EVLSEEIAKYYQQKSENLMDRFLVFLEPMMTLFVALLVLFLALGIFLPMWDLGSGVNF
                     "
     gene            complement(8238..9797)
                     /locus_tag="RTF91_000990"
     CDS             complement(8238..9797)
                     /locus_tag="RTF91_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HDZ4943882.1"
                     /translation="MRNRMDKTFQAYIDNEMSLDEICAKFSITSENFFKKLANFYNLN
                     FIDLDKDGDFIYEAIPFSLLLKFKFLLIKNNHDFVIIRSKPCSLELLEQVKTFMICEK
                     INTAIADELKIAKILNQIRIQEEIKRLSIKLRLEWQESQKRDDQSCISQIFDFLLHEI
                     LSFHASDIHIEARSDDAMIRFRVDGILREFAIFEKDIYEALVFHIKFLACLNLAESRK
                     TQDGSFELDFENEKYDFRVSCLPLIYGESVVIRILKHDKEILDLYKLNLGDKNLEILK
                     KILHRPNGMILLTGPTGSGKSTTLYACLNELKSVEKKIISAEDPIEYKIPLVQQILLN
                     SKVGVEFNSILRAILRQDPDIIMIGEIRDEESLDIALKASLTGHLLLSTLHTNDALST
                     IDRLLDMQAKSYLIASALSLVIAQRLVRKLCPWCKQKSKKHYIEFEGEFFEPKGCERC
                     HHSGFFGRELIAECLEINEDLACAIRESQNKMILMELAKKHGFQTMFEQGLKKAKEGL
                     TSIDELLRVVR"
     gene            complement(9787..10374)
                     /locus_tag="RTF91_000991"
     CDS             complement(9787..10374)
                     /locus_tag="RTF91_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HDZ4943883.1"
                     /translation="MQERIYELELKYKYFLLKKYLKYLFLIILISIIAFCSFMAIQKY
                     NKQKNIYLQAIEHKKHLEQKILQAQILQEKNKIYKEKLYKELEEIKAIQENTYVSKIE
                     IDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDRQKQDSW
                     LIFAQAKRALGEEKEAQSALDAYINYYGFMELDEK"
     gene            complement(10378..10986)
                     /locus_tag="RTF91_000992"
     CDS             complement(10378..10986)
                     /locus_tag="RTF91_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ4943884.1"
                     /translation="MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLT
                     EKYNIDFINENFKDQSFLKEKIEFLISQGQSLIILDEVGMYDHAMLESIRIYSDSISF
                     VLSSHKKLNILKKEHFKSRLSACFELKNISLLELDNYIKLKFEMNFSNKCLKFLQKIS
                     QGNLRYIDKTLKTFCEINSFFDKNKSQEYILKLSALENDLLR"
     gene            complement(10979..12391)
                     /gene="mshL"
                     /locus_tag="RTF91_000993"
     CDS             complement(10979..12391)
                     /gene="mshL"
                     /locus_tag="RTF91_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus (MSHA type) biogenesis protein MshL"
                     /protein_id="HDZ4943885.1"
                     /translation="MIRLILINFLFWHCLYAIDCQKRLFDININEKLSIQESLDELAK
                     YCSFSIIVKDKIAKEKLEKLQNSVNIHQMSLDEIFNFFIKEHDLSYDFDGKILRISGI
                     DTKIFKISYITSIREGQSITKASVDAKPRQNEYSGSFDDAEDNMIKSMEKFDFWQNIE
                     KEIIVLLKNSHEDYEAKTPIINSNAGIIIVTGTNSQLKSVKNYLQKLENRLKKQVIID
                     VSILAVSLNENHSSGINWQNFNIGLNSQANNENSFIQLQNGQGFVKNLGLRANLNFDS
                     IVNFLSQNGKTSVLSNPKLMALNNQQAIISVGDTINYQVKESSKGTENGTTVSESYNN
                     YSIFVGILLNILPEISDDGKIMLRINPSLSDFKYPEDNKRQKEPRTIAPDTIQKKLSS
                     VVQVENNQTLILGGLISHDKSNEKNSINFLSKIPILGSLFKGEVLDSKATEIVFIITP
                     SIVDSTNAPSLKDLGFKHYE"
     gene            complement(12369..12680)
                     /locus_tag="RTF91_000994"
     CDS             complement(12369..12680)
                     /locus_tag="RTF91_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HDZ4943886.1"
                     /translation="MCFGTLFAQDNFEEYFKLIDKQNHVNFNALQNPFVNPTFEKLRQ
                     IKITAIMLNKVKIYDRWYKKGDMIDDATINEINTKEIKFKYDNLEIAIQINKNDKINI
                     N"
     gene            complement(12704..16264)
                     /gene="nifJ"
                     /locus_tag="RTF91_000995"
     CDS             complement(12704..16264)
                     /gene="nifJ"
                     /locus_tag="RTF91_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HDZ4943887.1"
                     /translation="MGKIMKTMDGNEAAAYAAYAFTEVAGIYPITPSSPMADYTDMWA
                     AAGKKNLFGVPVKIVEMQSEAGAAGSVHGSLQAGALTTTYTASQGLLLKIPNMYKIAG
                     QLLPCVIHVAARSLAAQALSIFGDHQDIYAARQIGFAMLCSHSVQETMDLAGVAHLAA
                     IKGMVPFLHFFDGFRTSHEIQKIEVMDYAHFDRLLDREALLEFRNNALNPENPKTRGT
                     AQNDDIYFQTREVSNRFYDALPDVVNEYMQEISKITGREYKPFTYYGHKEPERVIVAM
                     GSVTQALEEVVDYLSAKGEKVGILKVYLYRPFSLKYFFDVMPKSVKKIAVLDRTKEPG
                     SLGEPLYLDIKSAFYGRENAPIIVGGRYGLSSKDVDPAQMIAVFENLKLDNPKDGFTV
                     GILDDVTHTSLNTGEKISLGDESTIECLFYGLGADGTVGANKNSIKIIGDKTDFYAQA
                     YFAYDSKKSGGYTRSHLRFSKKPIRSTYLVSTPHFIACSVAAYLEIYDVLAGIRKGGT
                     FLLNSIWNAEETIRQLPDAVKKTLAEKEINFYIINATKLARDIGLGNRTNTIMQSAFF
                     KLVKIIPYEDAQKYMKELAYKSYNKKGDAIVEMNYKAIDVGADGLVKVEVDPNWKNLE
                     IKEKEQTNAYKGTEFVEKIVKPMNASKGDDLPVSAFLGYEDGSFEHGTTEYEKRGVGV
                     MVPRWIEANCIQCNQCASVCPHAVIRPFLINDEEMANAPRGVKDHALEAKGVKGEKLS
                     FKIQVSPLDCTGCELCVHECPTKEKSLVMVPLREEMDFGEQENADYLFKEITYKDDIL
                     NKETTKGAQFAQPLFEFHGACPGCGETPYITLITRLFGERMIVANATGCSSIYGGSAP
                     STPYRKSVKNGHGPAWGNSLFEDNAEFGLGMKIATENTRHRIENIMNESMQEVPNALS
                     ALFKDWIANKDNGAISIEIKDKMIPILEQNKNIKAVQDILELKQYLSKKSHWIFGGDG
                     WAYDIGYGGLDHVLASGENVNVLVLDTEVYSNTGGQSSKSSRTGAVAQFAAAGKPIQK
                     KDLGQIAMTYGYIFVAQVNSTANYTHLIKAITAAEAYDGPSLVICYSPCIAHGVKGGL
                     GYSGEQGELATKCGYWPLYTFDPRLEEQGKNPLTLIGKEPDWDLYEQFLMNEVRYNSL
                     KKANPEHAAELFERNKKDAQRRYRQLKRIAMADYSNEVES"
     gene            complement(16363..16954)
                     /locus_tag="RTF91_000996"
                     /pseudo
     CDS             complement(16363..16954)
                     /locus_tag="RTF91_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794520.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
     gene            complement(16954..17913)
                     /gene="cadF"
                     /locus_tag="RTF91_000997"
     CDS             complement(16954..17913)
                     /gene="cadF"
                     /locus_tag="RTF91_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding outer membrane protein CadF"
                     /protein_id="HDZ4943888.1"
                     /translation="MKKILLCLGLASVLFGADNNVKFEITPTLNYNYFEGNLDMNNRY
                     APGVRLGYHFDDFWLDQLEFGLEHYSDVKYTNTDKTTDITRTYLSAIKGIDVGEKFYF
                     YGLAGGGYEDFSNAAYDNKSGGFGHYGAGIKFRLSDSLALRFETRDQINFNHANHNWV
                     STLGISFGFGGKKEKAVEEVASTRLAPQAKCPVEPREGALLDENGCEKTISLEGHFGF
                     DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNVGSRAYNQKLSERRAKSVANEL
                     EKYGVEKNRIKTIGYGQDNPRSSNDTKEGRADNRRVDAKFILR"
     gene            complement(18039..18428)
                     /gene="rpsI"
                     /locus_tag="RTF91_000998"
     CDS             complement(18039..18428)
                     /gene="rpsI"
                     /locus_tag="RTF91_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDZ4943889.1"
                     /translation="MATTYATGKRKTAIAKVWVKPGSGKISVNGVDLNTWLGGHEAIK
                     LKVVQPLLVTKQETSMDIKATTLGGGYSAQAEALRHGISRALAAMDADFRALLKPKGL
                     LTRDSRTVERKKYGRRKARRSPQFSKR"
     gene            complement(18431..18856)
                     /gene="rplM"
                     /locus_tag="RTF91_000999"
     CDS             complement(18431..18856)
                     /gene="rplM"
                     /locus_tag="RTF91_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDZ4943890.1"
                     /translation="MTKITKPNEVKREWIVLDAEGKRFGRLLTEVATILRGKNKPCFT
                     PNVDCGDYVIIINASKAVFTGANKAEDKLYHRHSGYFGSVKSEKFGDLLEKNPAKLYK
                     LAVRGMLPKTNLGRAMLKKLKIYAGSEHPHTAQIAKEGK"
BASE COUNT         6739 a         3180 c         2595 g         6481 t
ORIGIN      
        1 ctttgattta cctaaaactg gtgcttttga taatgaaatc aaagaactta aagaaattaa
       61 atatgatttt aaagatttca atatagcttt ttatggtttt aatgcttgtg atactttaaa
      121 atccaaactc aaggctaaat ttatctccta tgaaaacagc ataaaaaaca atggttttac
      181 tttgttaaat ttaaatccta cactaagtta tgaaatggct gcagatattg ttttagatgc
      241 ttatgatagt ggagctgatt ttatagtagt aaaagaagaa aaagattttt atctttttga
      301 tacttgtgcc aaaaaactta tgcaaacaag tggtagggaa tttgaggatt tttatatttt
      361 gagtcgtttt gaatttttag ctctcattca aggtatacaa gccccatcat taaaaaatca
      421 cactttaaag gttagtttga tatgaaaatc tctttagaat gcaaagatct catcatagaa
      481 aaaactttag aacttttttt aaaggatcat ttggtgatga aaaaagactg tgattttatc
      541 attagtgatg aaaaaattca cattgcaaaa cccttattta tcatttctaa aaactcgcca
      601 tttttaagta taccttttag taaagaagcc ttatttgagt ccttaaatga atttgacaat
      661 gccttaaaag ctgctgcttt acaacttgca cttgaacaaa aaagattgct tgaaaaaaaa
      721 attgatgcta tagctttcga atttaaaaaa gattacgaaa ataagatcga tcttgctata
      781 aaagatctta aaaacaaact cataaaagca ctcaatgatg aatgatgaat ttataagcgt
      841 taaagacttt tttaaccata atgaaaaaaa ggaaaaaatt cttcaaaaac aagaaatcaa
      901 ctcccctaaa gaaaaaacga aaaaaaccaa agaaacaaag ctttatacaa gtatagaaag
      961 tggcaaatat aaaggaaaaa aactactttt acctagtctt acaaccacaa gaagcacaaa
     1021 aagcatagta aaaagttgtg tttttaatgt gataagagaa aatttaagag ataaaatttt
     1081 tattgaagcc tttggcggaa gtgctttgat ggcagctgaa gcgctgagta attacgcttt
     1141 aaaagcttat gctatagagc ttgatacaaa agcttataaa atcgctttag aaaatgctaa
     1201 aaatataaac ataaatttag aagtcattca cgcaaatact tttgaaattt taccaaaact
     1261 tataaaaaat tcaaaaaatg aaatcatctt atatcttgat ccaccttttg atatcagaga
     1321 aggttttagc aatatttatg aaaaaattta tcatttttta gaaaatttgc atttaaaaac
     1381 tttaaaacta attatttttg aacaccattc cactatcaaa actcctgaaa aaatccaaaa
     1441 ttttcaaaaa accaaagaaa agaaatttgg ctcaacgagt ttaagttttt atacttttta
     1501 gcttacttgg aacacttatt gctttatcta taatcaacaa tagattaaag gaagaatcca
     1561 tgagagtttt aacgatattt ttactcttta tgacaagcat tttttcagtg caaatcaagg
     1621 atgtagcaaa cactgtgggc gtaagagata accaacttat aggttatgga cttgttgtag
     1681 gacttaatgg aagtggtgat ggaacaagtt ctaaatttac actacaatcc atctcaaacc
     1741 ttttacaagg tatgaatatc aaagtagatc ctaatgatat caaatcaaaa aataccgcag
     1801 ctgttatggt tacagctaaa ctcccagcct ttgcaaaaag tggagataaa cttgatatta
     1861 ctgtttcatc tatgggtgat gcaaaatctt tacaaggtgg aacacttttg cttactgcac
     1921 ttcgtggaat tgatggtgaa atttatgcta tagcacaagg ctctatctca acaggaggtt
     1981 tgacacctag accaggagga gcaggttctc actcaaccgc tgcaattgta atgggtggag
     2041 ctaatgtaga aagagaaatt ccacaaaatt ttagtcaaaa taacgatcta accttaagct
     2101 taaaagtagc agactttaaa acagcaaatg atatagaaag agttttaaat actgtctttg
     2161 gcgaagaagt ggccaaagct atcgactctc gtacaataag actcaaaaaa cctgaagatc
     2221 tttcaaatgt tgattttatg gcaagagttt tagaacaaga tatagcttat aaaccacaaa
     2281 gcaaagtcat cattgatgaa agaacaggaa cagtgattgc tggagttgat gtagaagtag
     2341 aacctgtttt aatcactcat aaagacatca ctataaaaat agatccaaat aataatgcag
     2401 tagccaacca aaatgaaatt gatatgaaag atggtggttt tgtagatcca agttcaaata
     2461 ccttaagaat caacaatgca aaaagcacag ttgcaaatat tgccagaatg cttaacaaac
     2521 ttggagcaac accaaatgat atcatcgcta ttatggaaaa tttaaagcgc gcaggtgcaa
     2581 ttaacgcaga tttggagatc atctgatgaa agtagataat tttttaaata cttatagtat
     2641 gaatagcacc ttgcttgatc gtgcagcaaa agcaaggggt ttagaattaa gtatcaagat
     2701 aaatgataat gatatagtta caaaaaccaa agaagatgaa gccttaaaag agcaaaccga
     2761 tgcttttgaa gcattttttt taaagcaagt tttagatgta tctttgaaaa atcaaaattc
     2821 actctttgga aaagatgcaa gtgatgaaat atactcttct atgtataacg atactatgag
     2881 taaagcttta agcggaagta tgggtttttc aaaattatta tacgattttt taaaagaaag
     2941 gggttaagtt ttttaaattt aggtcgatat ggtttgtaga ggattataac taagatcaag
     3001 gaggcagaaa tgatcaatcc tatacaacaa agttatgtgg caaataccac attaaataca
     3061 aataaaatag ataaagaaac taaaacaaac gatactcaaa aaacggaaaa tgataaagcg
     3121 agtaaaatcg cagagcagat taaaaatggt acctataaaa tcgatacaaa agctacagct
     3181 gctgcgattg ccgactcttt gatctagctt tcattctcct tttttgagag agaaaaaagg
     3241 agaaaatatg cttaaacaaa gacttgatga agtaaatgct atcttagcaa aacttattgc
     3301 tttaactgaa gaagatatag aaaatatcaa agtggctaaa catgagagtg taacgccaag
     3361 tgtagaagaa aaaaacaaac ttatcgctga atttattaca gctaaaaaac aacttgatgt
     3421 tgccttggtt gaattaaaca acagctctac aaaaggactt agcgaactct tagatgatga
     3481 agataaacaa aaactagact tactcaaaaa aaatcttcaa aaccttcata acaaaaacaa
     3541 agagtatgct aaatttgttc ttattgtcaa agactttctt gatggtttgg taaataaaat
     3601 gtttgatatc aatgatggaa caaataatgc ttatggagat aaaaagacaa atccggagtc
     3661 aattttcaaa atcaatgtat aaggatttat aatgggtatt tttggaacat tacacacagg
     3721 tgttacaggc ttaaaggcaa gtgaagtcca aatcgcaaca actggaaata atatctcaaa
     3781 tgctaatgca actttttata ctcgccaaag agtagtgcaa actacaaacg gatacatcac
     3841 aacaggtgga gtccaagtag gtacagggac tgctgtagaa agtatagtgc gtttgcatga
     3901 tgagtattct tactataaat taaaaggtgc atcaaatcaa ctagaataca ctaaatatat
     3961 ggcttcaacc ttacaagaaa ttgctcagcg ttttcctgat ttgcaaaata ctggaatttt
     4021 aaaaaactta gaaaattata acaaagcttg gaatgatttt gcatctaatc ccaatgaaaa
     4081 tgctacaaaa ataacccttg taaaagcttc tcaaacctta acagaaagca ttaataatac
     4141 ctttacaacc ttagataaaa tccaaaaaaa agtagataat gatattaaaa atacggttaa
     4201 tgagattaat aaaattggcg aagaaatcgc tattataaat aagcaaattt atggacaaga
     4261 agccttgcca acagaacatg caaatgaact tagagataga agagatgaac ttgagcttac
     4321 tctttcaaaa ctagtgagtg cagttgcaag taaaaatgaa atcaatcaag ataaccgcct
     4381 tgatacaacc atcactgatc caagacatca atacaatcta agtatagaag gttttagtat
     4441 agtagatggg attaattttc atcctttaaa gcttgattat gatgataaaa ataaatctta
     4501 tagtatttat tatgaaactc ctgatgaaaa agttcgtgat cttactgcaa aaattaacgg
     4561 agggcaactt ggagctcaac ttgacttacg cggtagaaat tatagcaaaa atgagggaaa
     4621 atatgaagat ggaattatcc aaggctatat ggattcttta gacacttttg ctaaaactat
     4681 gatcaatgaa actaacaatc tttatgcaag ttctgcaaaa agctctgtta cttctgatta
     4741 tctatctgga cttaaaggag atattccttt agtcaattat gatagaacta tacaaccagg
     4801 aagttttgat ataattattt atgatgataa aggtgataaa aaactcacta aaaccatcac
     4861 aatagatgtc aatacaacca tgaatgacat catgagtcaa atcaatgcca atacagatga
     4921 taataacaat aaaaattcaa acgatgatgt tgatgaccat atcaatgcaa gttttagcta
     4981 tgatgcaaaa actggagatg ggttgtttca aatcaatgca aaatcaggtt ttaaagtggc
     5041 cattgaagat aaaggtacaa attttgcagg tgcatttagc ataggtggtt tttttagcgg
     5101 aactgatgca agtgatataa aagtaaaaga ttccatctta aatgatccaa gcacagtaag
     5161 agcaagctca aatggtgttg atagcggcaa tgatatggca aataaaatca tccaacttca
     5221 atatgaaaaa gttaattttt acaatgaaga tgggactatc gataatctta ctatggaaga
     5281 atattatcgt aaacttacag gtaaaatagc ttcagatggt gaaaataaca atgttgtaaa
     5341 tctaagcaat gaaactcttt acaattctgt ttacagcgag taccaatcta aaagcggcgt
     5401 aaatacaaat gaagaattag ctgctcttat acaatatcaa tcaagctacg gtgctgcagc
     5461 aaaaattgtc tcaaccgtaa atcaaatgct tgatacccta ctagggctta aatcttaagc
     5521 tctagcaata aagtgaaaaa tttcatccag cttaaaacca aacttgattt tttagctaat
     5581 cagaaaaata ctattcattc tctttttgaa actccagatc ctttgcaaat tgctaaaatt
     5641 cacaacgatg aatttattgc tttgctttgt gctttatttg cttatggaaa tgccaaaaac
     5701 atagtaaatt ttctaaaaaa acttgatttt tctttgttaa gccttcaaga agaactgatc
     5761 aaaaaagaac ttaaaggtct aaaataccga tttcaaaatg aaagagatat acaagaaatt
     5821 tttatcactc tttcaagact taaaaatgaa atttcactcc atgaactttt taatcaagct
     5881 tatcaaaaaa gagaaaatac cacagatgca attttagctt ttatgcaaaa aattaaaact
     5941 ttaaattctt attcaagtta tggttatgat tttttctttg gtaaaatttg gcaaagcacc
     6001 cctacttcgc ctcttaaacg ctataatatg tatctaagat ggatggttag aaaagataag
     6061 cttgatcttg gactttttac caaaattcac accaaaaatc ttttaatccc acttgatacg
     6121 catacgcata aaatttcctt gactttagga cttctaaagc gtaaaatata tgattataaa
     6181 agtgttttag aactcacaca aaatttaaaa aaattagatg caaatgatcc tataaaatat
     6241 gactttgcac tttatcgttt agggcaaaac aaggaaattg ataaatttat aaggaatgaa
     6301 aatgggcttt gagcacttag atacaattta ttattttata ctttttgttg tagctctttt
     6361 tgctggtttt atagattcta ttgtaggtgg aggtggactt atcactctgc cagcactgat
     6421 agcttgtgga attcctgcac atttatcctt agcaacaaac aaactccaaa gtgtttttgg
     6481 atcttttaca gcaactctaa cttattttaa atccaccact ctacctcatc ttgcttgggg
     6541 tatttttttc acagccatag gagcaggcat aggaagctat ggtgttcttt ttgtaaaaga
     6601 tgaacaatta aagcttatta ttttaatctt tttaactctt actttcttgt atacagcttt
     6661 acgtcctaat ttaggcaaac atgaaagcaa acctaaatta aaaaatatca aaatttttca
     6721 tttaatttgc ggcttaacct taggctttta tgatggattt ttaggacctg ggacgggttc
     6781 attttggatt tttgcttgtg tgatgttgct aggatttaac atgagaaaag caagtattaa
     6841 taccaaaatt ttaaatttta caagcaatat cattgctctt gctatattct tatggcaata
     6901 cgaactttta tgggctatag gtttactcat gggcatagga caagttttag gggcttatct
     6961 tggctcaaag cttgtattaa aaaccaatgg aaaatttata aaaactttat ttttaatcgt
     7021 tgtgggtgct actatcatta aagtagcttg ggattatttt aattaaaaat tcaccccaga
     7081 accaagatcc cacataggta aaaatatacc taaggccaaa aataaaacca aaagtgccac
     7141 aaataaagtc atcataggct ctaaaaaaac caaaaatcta tccatcaaat tttcactttt
     7201 ttgttgataa tatttagcaa tttcttcgct caaaacttct agttttccac ttttcatcgc
     7261 aacattaagc atagaaaata ccaaagaatc aaaaatatca atctttttaa aagcttgact
     7321 tagctcaaga ccagaatcta taaaactaaa aagtttctta tactgaaaaa ttaaaaattt
     7381 attttcaagc cccatgatgg ctaagtcaaa agccttagat attgaaattc catttttcaa
     7441 aagcaaggaa aaaaccatga agaaataata attttgatta taaagaatca aacgagaaag
     7501 caaaggtatt tttaaaagta aaaaatcata agaaaacgca aaagaataaa aatttttata
     7561 agctaaaaca gtcataaaaa taaaaacaac aagcaaggat gtacaaaaaa ttccataagt
     7621 gtctaaaaag ttataaattt ctaacattgc atgtgtgata aaaggcaaat tcgcgtctaa
     7681 attttcaaat aaatctttaa aatttggcac cacaaaaagc attaaaaata aaaatgctcc
     7741 aataatacct aaaaaaacca aagtaggata tctcaaagcc tttttcaact gtttttgatt
     7801 ctccatactt ttttctcgaa gtttagaaat ttggctaaat atttcgctga tttttcctgt
     7861 attttcagct gtttttatca aagccaactc tgcacgattt aatccaaaat tagcattttc
     7921 aaaagcttgg tttagacttt gggctaaaat taaattgtct aatatttttt tcataatctt
     7981 gcaagaatgc ataagatata attctttaat tgcttcttga acgcttaatc caacttcgca
     8041 caataaagcc aattctttaa aaaagagtat aaaattttca tcctttaatc tctgaaaatt
     8101 agacttttga atttctttta tattaataat tttccaattc tttgacaaag cctttgtttg
     8161 agctgtattt aaattttcag cttttatagt ttttttataa ttttgattgt ttttaagaaa
     8221 ttccacttca taaaatttca tcttacaacc cttaaaagct catctatgct tgtaagacct
     8281 tctttggctt ttttcaaacc ttgttcaaac atggtttgaa aaccatgttt ttttgcaagc
     8341 tccattaaaa tcattttatt ttggctttct ctaatagcac aagctaaatc ttcattgatt
     8401 tccaaacact cagcgattaa ttctctgcca aaaaatccgc tatgatggca acgctcacat
     8461 ccttttggtt caaaaaattc accttcaaat tcaatataat gttttttgct tttttgctta
     8521 caccaaggac aaagttttct aaccaaacgc tgtgctataa caagactcaa agctgatgct
     8581 atcaagtaac tttttgcttg catatctaaa agtctatcaa tagtactaag agcatcatta
     8641 gtatgtaagg tgcttaaaag caaatggcct gttaaagaag ctttaagtgc aatatctaaa
     8701 ctttcttcat cacgaatttc tcctatcatg ataatatcag gatcttgtct taaaattgct
     8761 cttaaaatac tgttaaattc gactccaact tttgaattaa gtaaaatttg ctgcactaaa
     8821 ggaattttat attctatagg atcttctgca gaaataatct ttttttccac actctttaac
     8881 tcatttaaac acgcatataa agttgtgctt ttaccactac ctgtagggcc tgttaataaa
     8941 atcattccat taggacgatg taaaatcttt tttaaaattt ctaaattttt atccccaagg
     9001 tttaatttat ataaatccaa aatttcttta tcatgtttta aaattcttat aacgacactt
     9061 tcaccataaa tcaaaggcaa acatgaaaca cgaaaatcgt atttttcatt ttcaaaatct
     9121 aactcaaagc ttccatcttg tgtttttctt gattcggcca aatttaaaca agctaaaaat
     9181 ttaatatgaa ataccaaagc ttcataaata tccttctcaa aaatagcaaa ttcacgcaaa
     9241 attccatcaa ctctaaacct aatcatagca tcatcactcc ttgcctctat gtgaatatca
     9301 ctcgcatgaa aagataaaat ttcatgtaat aaaaaatcaa aaatttgact gatacaactt
     9361 tgatcgtctc ttttttgact ttcttgccat tcaagtctaa gtttgatgct taatctttta
     9421 atctcctctt gtatgcgaat ttgatttaga attttagcta tctttaactc atcagcaatt
     9481 gcagtattta ttttctcgca aatcataaaa gtcttaactt gctctaaaag ctctaaagaa
     9541 caaggtttag atctaataat cacaaagtca tgattatttt taataagcaa aaacttgaat
     9601 ttcaaaagca aagaaaaagg tatagcttca taaataaaat caccgtcttt atccaaatca
     9661 ataaaattta aattgtaaaa atttgctaat tttttaaaaa aattctcaga agtgatacta
     9721 aatttagcac aaatttcatc aagactcatt tcattatcaa tataagcttg aaaagtttta
     9781 tccattctat ttctcatcta attccataaa accataataa tttatataag catccaaagc
     9841 actctgagcc tctttttctt cacccaaagc tcttttagct tgagcaaaaa tcagccaaga
     9901 atcttgtttt tgtctgtcaa gttcatttgc ttttaaagcc caaaatatcg ttttttgata
     9961 agctttaata tcaaaatact tcttagccaa atttaatgcc ttttcatagc ttggattttg
    10021 ataaaaagat ttttttaaat cagaaatatt taaaatctta gaatcaattt ctatcttgct
    10081 aacatatgta ttttcttgta ttgctttaat ttcttctaat tctttatata atttttcctt
    10141 ataaatctta tttttttctt gtagaatttg tgcttgaaga atcttttgtt ctaaatgttt
    10201 tttatgttca atagcttgca aataaatatt tttttgctta ttgtattttt gtattgccat
    10261 aaaagaacaa aatgctatta tcgatatcaa aataattaaa aacaaatatt ttaaatattt
    10321 tttaagtaaa aaatatttat acttaagctc aagctcataa attctttctt gcatatctta
    10381 ccttaataag tcattttcta aagcgctaag ctttaaaata tactcttgac ttttattttt
    10441 atcgaaaaaa ctatttatct cacaaaaagt ctttaaagtt ttatcaatat atcttaaatt
    10501 tccttgggaa attttttgca aaaatttaag acatttattt gaaaaattca tttcaaattt
    10561 caatttgata taattatcaa gctctaaaag actgatattt ttcaactcaa aacaagcact
    10621 tagacgactt ttaaaatgct cttttttaag tatatttaac tttttgtgag aacttaaaac
    10681 aaaacttata gaatcactat aaatcctgat gctttctaac attgcatgat catacattcc
    10741 tacttcatca agaataatta aactctgacc ttgtgaaatc aaaaactcaa ttttttcttt
    10801 taaaaaactt tgatctttaa aattttcatt aataaaatca atattatatt tttctgtcaa
    10861 tctttgcagc aatacacttt taccactgcc actttttccc cataaaaaaa taaaagcttt
    10921 ttgactttct aaaatttgat tgatttggtg aaaaatttct tctctaaatg gaataatttt
    10981 actcataatg tttaaatcct agatctttaa gacttggagc atttgtacta tctactatac
    11041 ttggagtgat aataaaaaca atttcagttg ctttagaatc taaaacttct cctttaaata
    11101 aagaacctaa aattggaatt tttgataaaa aattgataga atttttctca ttagatttat
    11161 catgcgaaat caatccacct aaaatcaaag tttgattatt ttccacttgc acaacactag
    11221 aaagcttttt ttgtatagta tcaggagcga tagttcttgg ttctttttgc cttttattat
    11281 cttctggata cttaaaatcg cttaaacttg gattaatcct aagcattatc tttccatcat
    11341 cagaaatttc gggcaagata ttaagtaaaa tacccacaaa aatagaataa ttattataac
    11401 tttcactaac agttgttcca ttttcagtac ccttagagct ttctttgact tgataattta
    11461 tagtatcccc tacagaaata atggcttgtt ggttatttaa agccataagc tttggattag
    11521 aaagtacact agtttttcca ttttgagaaa gaaagttaac aatagaatca aaatttaaat
    11581 ttgcccttag acccaaattt ttaacaaaac cttgcccatt ttgaagttga ataaaagaat
    11641 tttcattatt tgcttgagaa tttaaaccta tattaaaatt ttgccaatta atcccactag
    11701 aatgattttc atttaaactc acagcaagta tactaacatc aataataact tgttttttaa
    11761 gacgattttc taatttttgc aaataatttt tcacactttt taactgagaa tttgttccag
    11821 ttactataat aatacctgca ttggaattta taatgggagt tttagcttca taatcttcat
    11881 gggaattttt taataataca ataatctctt tttctatatt ttgccaaaaa tcaaattttt
    11941 ccatactttt aatcatatta tcttctgcat catcaaaact accgctatat tcattttgtc
    12001 ttggtttggc atctacagaa gctttggtta tactttgtcc ctctctaata gaagtgatat
    12061 aacttatctt aaaaatcttc gtatcaatac ctgaaattct taaaatttta ccatcaaaat
    12121 cgtagctaag atcatgctct ttgataaaaa aattaaaaat ttcatctaaa ctcatttgat
    12181 gaatattgac agaattttgc aatttttcta atttttcttt ggcaatttta tctttaacaa
    12241 taatactaaa agaacaatat tttgcaagtt catcaagact ctcttgtatg cttaattttt
    12301 cattgatatt gatgtcaaaa agacgctttt gacaatctat agcataaaga caatgccaaa
    12361 aaagaaagtt aattaatatt aatcttatca tttttattta tttggattgc aatttctaaa
    12421 ttatcgtatt taaacttaat ctctttggta tttatctcat ttatagtagc atcatcaatc
    12481 atatcacctt ttttatacca tcgatcataa atctttactt tattaagcat aattgcagta
    12541 atttttattt gtcttaattt ttcaaaagta ggattaacaa acgggttttg aagagcgtta
    12601 aaatttacat gattttgctt atctataagt ttaaaatact cttcaaaatt atcttgtgca
    12661 aacaaagtgc caaaacacag tgttgcacta aaaatacatt ttatcagctt tcaacctcat
    12721 tgctataatc agccatagca atacgcttaa gctgtctata acggcgttga gcatcttttt
    12781 tattgcgttc aaagagttca gcagcatgtt cagggtttgc tttcttaaga gaattataac
    12841 gcacttcatt cattaaaaat tgctcataca aatcccaatc aggttctttt cctattaggg
    12901 ttaaaggatt ttttccttgt tcttctaagc gaggatcaaa ggtataaagt ggccaataac
    12961 cacattttgt agcaagttca ccctgctctc ctgagtaacc aagcccacct ttaacaccat
    13021 gagctataca aggagaataa caaatcacta aagatggtcc atcataagct tcagctgcag
    13081 taatagcttt gataagatgg gtataattcg cagttgagtt cacttgtgca acaaagatat
    13141 aaccataagt catagcaatt tgacctaaat cttttttctg tataggttta cccgctgctg
    13201 caaactgcgc cacagcacct gttctagaag attttgagct ctgaccacct gtgttggaat
    13261 aaacttctgt atcaagcact aaaacattta cattttctcc acttgctaaa acatggtcaa
    13321 gcccaccata acctatatca taagcccaac catcaccacc aaaaatccag tgagattttt
    13381 tgcttaaata ctgtttaagt tctaatatat cttgcacagc tttaatattt ttattttgct
    13441 ctaaaatagg gatcatttta tctttgattt cgatagaaat agcaccatta tctttatttg
    13501 caatccaatc tttaaaaaga gccgataaag catttggcac ctcttgcata ctttcattca
    13561 tgatattttc aatgcgatgt cttgtatttt cagttgcgat tttcataccc aaaccaaact
    13621 cggcattatc ttcaaaaagt gaatttcccc aagcaggacc gtgtccgttt ttcacacttt
    13681 ttctataagg agttgatgga gctgaacccc cataaataga actgcatcct gtagcattag
    13741 ctacaatcat tctttcgcca aataatcttg taattaaagt aatataagga gtttccccac
    13801 acccaggaca tgcaccatga aattcaaata aaggctgtgc aaactgtgct cctttagtgg
    13861 tttctttatt taaaatatca tctttataag tgatttcttt aaataaataa tccgcatttt
    13921 cttgttcacc aaaatccatt tcttctcgaa gtggcaccat aaccaaagat ttttctttag
    13981 taggacattc atgaacacaa agctcacagc ctgtgcaatc aagcggagaa acttggattt
    14041 taaaacttaa tttttctcct ttaactcctt tagcctctaa agcgtgatct tttactccac
    14101 gcggcgcatt tgccatttct tcatcattga ttaaaaacgg tctgatgaca gcatgcggac
    14161 aaactgaagc acattgatta cattggatac aatttgcttc tatccatctt ggcaccataa
    14221 ccccaacacc gcgtttttcg tattcggttg taccgtgctc aaaacttcca tcttcatagc
    14281 ctaaaaaggc tgaaacaggc aaatcatcac ccttagatgc attcataggt tttacgattt
    14341 tttcgacaaa ttcagtgcct ttataagcat tagtttgttc tttttcttta atctctaaat
    14401 ttttccaatt tggatccact tcaactttta caagtccatc agcacctaca tctatagctt
    14461 tatagttcat ctctacaatg gcatcacctt ttttgttata agacttatag gcaagttctt
    14521 tcatatattt ttgtgcatct tcataaggaa tgatttttac aagtttaaaa aaggctgatt
    14581 gcataatggt atttgtgcga tttcccaagc ctatatcacg agctagttta gtcgcattga
    14641 taatataaaa atttatctct ttttcagcca aagttttctt tactgcatct ggaagttgtc
    14701 ttatagtttc ttcagcattc caaatactat ttaaaagaaa ggttccacct ttacgaattc
    14761 ctgctaaaac atcgtaaatt tctagataag cagctacaga acaagcgata aaatgcggag
    14821 ttgaaacaag ataagttgaa cgaataggtt ttttagaaaa tcttaaatgg cttcttgtat
    14881 aacctcctga ttttttagaa tcataagcaa aataagcttg agcataaaaa tctgttttat
    14941 ctccgatgat cttaatcgag tttttatttg cacccacagt tccatcagca ccaaggccat
    15001 aaaataagca ttcgatagta ctttcatctc cgagtgaaat tttttctcct gtgttaagtg
    15061 aagtatgagt tacatcatca agtataccaa ctgtaaagcc atcttttgga ttatcaagct
    15121 taagattttc aaatacagct atcatttgag caggatctac atcttttgaa gaaagtccat
    15181 atcttccacc cactataata ggagcatttt cccttccata aaaagctgat tttatatcaa
    15241 gataaagcgg ttctccaagg cttcctggtt ctttagttct atctaaaacc gcaatttttt
    15301 tcactgattt tggcataaca tcaaagaaat attttagact aaatggacga taaagataaa
    15361 cttttaaaat ccctactttt tcgcccttag cactaagata atccactacc tcttcaagtg
    15421 cttgagttac agaacccata gcaacaatca cgcgctctgg ttctttgtgg ccataatatg
    15481 taaatggttt atattctcta cctgtgattt ttgaaatttc ttgcatgtat tcattaacaa
    15541 catcaggtaa agcatcataa aaacgattgc ttacttctct agtttgaaaa tatatatcat
    15601 cattttgagc cgttccacgt gtttttggat tttctggatt taaagcatta tttctaaatt
    15661 caagcaaagc ttctctatcc aataatctat caaaatgtgc ataatccatc acttcaattt
    15721 tttgaatttc atgacttgtt ctaaaaccat caaaaaaatg taaaaatggt accattccct
    15781 taattgcagc taaatgtgcc acgccagcta agtccatagt ttcttgcaca gaatgtgaac
    15841 aaagcatagc aaaaccaatt tgtcttgctg cataaatatc ttgatgatcg ccaaagatag
    15901 ataaggcttg agcagctaaa gaacgtgctg ctacatggat tacacagggg agtaattgac
    15961 cagctatttt atacatattt ggaattttaa gtagcaatcc ttgagaagct gtataagtcg
    16021 tagtcaaagc ccctgcttgc aaagatccat gcacactacc tgcagcacct gcttcacttt
    16081 gcatttctac gatttttaca ggaactccaa aaagattttt tttacccgca gccgcccaca
    16141 tatcggtata atcagccatg ggagaactag gtgtaatagg ataaattcca gcaacttcag
    16201 taaaagcata cgcagcgtat gcagcagcct catttccatc catagttttc ataattttac
    16261 ccattgagac cttcctttga ttatgataat ttttataatt ttttaactat caatttacta
    16321 taaattctct taaaaggcgt ttaacaaaaa cttgaaatta gtttaatcta gatttagatg
    16381 actaacagcc tcatatgtat tcaaaaatac tatataatgg gcttttaatt cattttcatt
    16441 ccataaccac aggttaagac taaagaaatg atattagcag aaattgtagc ttgaatatcc
    16501 ggtattgtat cacctatcat ataggcattt ttcgagtttt actaagtctt tttaaagcta
    16561 aaactatagg ttcgggattg aacttgagat ttatgacatc ttcaagaata attaaatttt
    16621 aatccctaaa taaacaagca aaattgggat aaatttacca ccttttgttg tactatacta
    16681 agttagcaat ttcacttcca aactctaatg cttcttttac tttaggcaaa aatagtttgc
    16741 tctaaataaa tttcacgata aactaattca aattctttgc ttaaattttt atcaggataa
    16801 agcattcaaa atatttgctc taaaggataa gctatgagat ttttgatttt attattagaa
    16861 gttaatccaa gggcttaaag ctccttggaa agaatttaat agcatctaga atcaattaag
    16921 tgtcatctaa atcaaacaaa atagttttat ttattatctt aaaataaatt tagcatccac
    16981 tcttctatta tctgctctac cttctttggt atcattactt gagcgaggat tatcttgacc
    17041 atagcctatt gttttgatac gatttttttc tacaccatat ttttcaagtt cattagcaac
    17101 acttttagca cgtctttctg aaagcttttg attgtaagct cttgatccta cattatctgt
    17161 gtgtccttca agtatagtat catatctttc attttcatct aaaacttttg caatttcttt
    17221 aattttttct tgaaaagttg gatttatagt agttttatca aaaccaaaat gaccttctaa
    17281 ggaaatagtt ttttcacaac cattttcatc caacaaagca ccttctcttg gttctacagg
    17341 acattttgct tgtggagcta aacgagtact agcaacttct tctacagctt tttccttttt
    17401 accaccaaaa ccaaaactaa tgcccaaagt tgaaacccag ttatgatttg catgattgaa
    17461 gttaatttga tctctagttt caaatcttaa agccaaagaa tcactaaggc ggaattttat
    17521 acctgcacca taatgtccaa atccaccgct tttattatca taagcagcat ttgaaaaatc
    17581 ttcatatcct ccacctgcta aaccataaaa ataaaatttc tcacctacat caataccttt
    17641 aatagcactc aaataagttc ttgtaatatc tgtagtttta tctgtatttg tatacttaac
    17701 atcagaataa tgttctaagc caaattctaa ttgatcaagc caaaaatcgt caaaatggta
    17761 accaagccta acacctggcg cataacgatt attcatatct aaattacctt caaagtaatt
    17821 gtagtttaaa gttggagtga tttcaaattt tacattgtta tcagcaccaa ataaaacact
    17881 tgctaaacct aaacataata atattttttt catagaaaaa acctttcgtt gcgttacaaa
    17941 ataaaaattt taaatcttct aattatatca taaatgataa aaaaaagaat gagttttata
    18001 aaaaatgtag aaaggcggga aaatcccacc tgaaaatatt aacgtttaga gaattgtgga
    18061 cttcttcttg ctttgcggcg tccgtatttt ttacgctcaa cagttctact atctctagta
    18121 agaagtcctt taggttttaa taaagcccta aaatcagcat ccatagctgc taaagctctt
    18181 gaaattccat gtcttaaagc ttcagcttga gcactatagc ctccgcctaa agtagttgct
    18241 ttaatatcca tcgaagtttc ttgtttagtt acaagtaaag gttgaaccac tttaagctta
    18301 atcgcttcgt gtccaccaag ccaagtgttt aaatcaacgc cattaacact aattttaccg
    18361 ctacctggtt ttacccatac ctttgcaata gcagtttttc ttttacctgt tgcatatgtt
    18421 gttgccatga ttattttcct tctttagcaa tttgtgcagt gtgtgggtgc tcactacccg
    18481 cataaatttt taatttctta agcattgctc tacctaaatt tgttttagga agcatacctc
    18541 tgactgctaa tttatataat tttgcaggat ttttttcaag taaatctcca aatttttcgc
    18601 tttttacact tccaaaatat cctgaatgtc tatgataaag cttatcttct gctttattag
    18661 cacctgtaaa tacggctttt gaagcattaa tgataatcac ataatcaccg caatcaacat
    18721 ttggggtaaa gcaaggcttg tttttacctc ttaaaatcgt tgctacttca gttaaaagac
    18781 gaccaaaacg tttgccttct gcgtctaaaa caatccattc tcgttttact tcgtttggct
    18841 ttgtgatctt tgtcataatt ttttaccttt gccaaaaatt ttttaaaaac atgattataa
    18901 ttattttagc ttaataaata cttaatttaa gaatatttaa agattaataa aataatttat
    18961 tttattaaaa tatgtaagaa ataatatact ttaat
//
LOCUS       DAPWAA010000031        18195 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.031, whole genome shotgun sequence.
ACCESSION   DAPWAA010000031 DAPWAA010000000
VERSION     DAPWAA010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18195
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.031"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..761)
                     /locus_tag="RTF91_001000"
     CDS             complement(<1..761)
                     /locus_tag="RTF91_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDZ4943891.1"
                     /translation="MEKKTTPSELELNEFIKIINEMSGIDLTDKKNILALKLSKFLEG
                     TNTKNFSDFLAKLKSNRQLKQETLDFVTIGETYFLRELAQLKEIVYYAKSLERRANIL
                     SAPCSSGEEVYSLALLAAQNFVKDMYILGIDINSSVIEKAKLGKYQGRTLQRLSENEK
                     RRFFLENEDKFYTINKNELCTCKFELCNVFEEKFSKLGKFDILVSRNMIIYFDHESKL
                     KLMERFHRILNDKGRLYVGNADLIPETIYFKKVFSP"
     gene            complement(779..1333)
                     /locus_tag="RTF91_001001"
     CDS             complement(779..1333)
                     /locus_tag="RTF91_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HDZ4943892.1"
                     /translation="MKLILIGSSTGGPNQLKFLLNDIDIKNTCVVIAQHMSASFIPSF
                     VGQFNKEAFSEVCLLNDKEMLGNKIYICPKNTILSGNLNIVAAWQDVVSSFKPSVDLL
                     FNSAVSLAKTNKILAIILTGMGDDGAKGLFELYKTGVKCLCENEIDSVVYGMPKRAKD
                     MNPHLKSMSLKEIKKEIINFIDQD"
     gene            1498..1935
                     /gene="rpiB"
                     /locus_tag="RTF91_001002"
     CDS             1498..1935
                     /gene="rpiB"
                     /locus_tag="RTF91_001002"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HDZ4943893.1"
                     /translation="MLREKIYIASDHAGFELKEKICLFLKEKNIIFSDLGTNTYMSCD
                     YPDYAHLLAEKIDKQSFGILICGSGIGISIAANRHNNIRCALCHESLSAELARKHNDA
                     NVLALGGRLIGIELAINIIEKFIQTPFEEGRHMQRIQKIEVKI"
     gene            1935..2267
                     /locus_tag="RTF91_001003"
     CDS             1935..2267
                     /locus_tag="RTF91_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943894.1"
                     /translation="MFTNWLILTILICGTIYLIVMLFYYKTLLNKEITSKDFIKNNLD
                     DTEIVIRKLQIQLQRSLGNIDILTEELNKIKADLTSLRTRNSQYRLENDKLRQRIKEL
                     EAKIEALL"
     gene            2264..2812
                     /gene="apt"
                     /locus_tag="RTF91_001004"
     CDS             2264..2812
                     /gene="apt"
                     /locus_tag="RTF91_001004"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDZ4943895.1"
                     /translation="MIKLTQKEQKYLLDNIRIIPDFPKKGIIFRDITTLLNNKEALNF
                     LLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLDLPFAPIRKLGKLPFETFSCEYD
                     LEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASHELIQKAGAQCVEACFLMN
                     LKDLNGANKLEKLTSIYSVLEI"
     gene            2831..3427
                     /locus_tag="RTF91_001005"
     CDS             2831..3427
                     /locus_tag="RTF91_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDZ4943896.1"
                     /translation="MEEFLKNLLYQYKDLAYIIIFLWCILEGELALILAGIFAHQGYV
                     NLGFVIFIAGLGGFVGDQIYFYIGRYNKRYIQKKLKTQRRKFAVAHLLLQRFGWPIIF
                     IQRYMYGFRTIIPMSIGITRYSAKKFAIINLFSAWVWASITILLAWYFGEQIWKMVSW
                     AEEHWYYAAIIIVAFLSLLLFGFKQMEKAILKNKRKRS"
     gene            3424..4875
                     /locus_tag="RTF91_001006"
     CDS             3424..4875
                     /locus_tag="RTF91_001006"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDZ4943897.1"
                     /translation="MKFEFSDKKLDIIKADFELIFIQNKNLKNFNKEKDFFKLNNYKG
                     EGTLLDLNSKKLYLELKSLAYEDIRLTLCTAYKNLEKLNIKSVKLPSIVSDCAIRSFA
                     SLVEGVLFGAYKFNKYKSEKKTSTLEKFIISSEELNGKKFNKNEAKIGLERGEILANA
                     TNFTKNIVNEIPEIYTPLKMAEDAQNLAKENKNITCKIYDEKFLTKEKMNAFLAVNRA
                     SIHPPRLIHLSYKAKNAKKRVVFVGKGLTYDSGGLSLKPADFMLTMKADKSGAAAAMG
                     IIKAVAELALDLEVHCILGATENMIGGNAYKPDDVLISREGVSIEVRNTDAEGRLVLA
                     DCLSFAQDLKPDLLIDMATLTGACVVGLGEFTSAIMGNNEELQNDFYLSSKKSGEYTT
                     ILHFNPHLRELIKSNIADVSNTASSRYGGAITAGLFLDNFIRKEYKDKWLHLDIAGPS
                     YTEKSWGYSSFGAGGAGVRMCVNYLIQILGKAK"
     gene            4872..5975
                     /gene="ychF"
                     /locus_tag="RTF91_001007"
     CDS             4872..5975
                     /gene="ychF"
                     /locus_tag="RTF91_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDZ4943898.1"
                     /translation="MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAM
                     VEVPDLRLNELAKIVKPERIMHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVIL
                     HIVRCFDEENITHIEGGVEPLRDVEIINTELILADIEQLSKKIEKLTKEAKANQKGAK
                     ENLELANSLLDHLNKGLSASSYPEKESENYQALIKELRLLSAKEVIYGANVDENGISE
                     DNDYVKALKEYAKKNNHEVIKLCAKIEEELVGLSEEESHEFLSSLGVNESGLDQIIRT
                     AFAKLGLISYFTAGVLEVRSWTIKKGWKAPKAASVIHNDFEKGFIKAEVISYEDFITH
                     NGENGAKEAGKLRLEGKDYIVLDGDIIHFRFNV"
     gene            complement(5997..7379)
                     /gene="argH"
                     /locus_tag="RTF91_001008"
     CDS             complement(5997..7379)
                     /gene="argH"
                     /locus_tag="RTF91_001008"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDZ4943899.1"
                     /translation="MKNEMWSGRFSNASDELLKEFNASLNVDKNLFNEDIQGSIAHAR
                     MLESCGILKKEELDAIIKGLEQVKSEIEQDKFVFDIKDEDIHMAVEKRLSEIIGSEIG
                     GRLHTARSRNDQVATDFKLFVKKSHIELMKLLKELIQTMLDHAKVHKKTIMPSFTHLQ
                     HAQLVSFSFYILAYAFMLMRDIKRLQNSLELADFSPLGSCACAGTSYITNREFSAKIL
                     GFKDIMPNAMDGVSDRDFALDLLYDIAVIFTHTSRLCEEMILFSSSEFSFITISDSFS
                     TGSSIMPQKKNPDVCELIRGKTGRVYGNLISLLTIMKALPLAYNKDMQEDKEGLFDSV
                     KTAKDSLVILNAMLKEIQINKENMLNACKKGHLLATDLADYLVREKNIPFRKAHFIVG
                     NVVAQAEKQGIDISEIKDLSKIDPIFDQKAMALLNFEISLNSKQSEGSSSIASVENQI
                     QILEDFIRNL"
     gene            complement(7389..8963)
                     /gene="pckA"
                     /locus_tag="RTF91_001009"
     CDS             complement(7389..8963)
                     /gene="pckA"
                     /locus_tag="RTF91_001009"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDZ4943900.1"
                     /translation="MKKFDNLGLDNIKEIFHNLSYDELNIHEKVNNEGLSTDNDTFCV
                     DTGIFTGRSPKDKYFVKQDPSSKYIAWGKINQPITKELFNKLLAKAKQGLSGKKIYVQ
                     DAFCGASLQSRKAIRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED
                     YKEDGLNSEVFIIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANV
                     GEKNDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGIFNFEGGCYAKTINLDPK
                     HEPEIYAAIKKNALLENVVLKTDKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHP
                     KNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGIVDPQATFSACFGEP
                     FMPLHPTVYARLLGEKIEKYEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGS
                     ITKCEFENFEVFNLAIPKALEGVEGALLNPINTWVDKNAYIATRDKLAHMFVQNFKRY
                     EDIKEGIEFSKFGPKN"
     gene            complement(8976..10775)
                     /locus_tag="RTF91_001010"
     CDS             complement(8976..10775)
                     /locus_tag="RTF91_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin attachment protein"
                     /protein_id="HDZ4943901.1"
                     /translation="MANKFIDVMDTSFRDGFQSVYGARVLMDDFFPAVEAAKEAGITH
                     FEFGGGARFQSLYFYLNEDAFVMMDRFRAIVGKDANLQTLARGVNTVTLDTGSRELVN
                     LHAKLFAKHGTTTIRNFDALNDVNNLKFSGECIVKHGLKHEITVTLMDLPLNCKGAHD
                     VSFYEKTLKEILTAEIPFHSICFKDASGTSNPNKIYETIKMARRILPQDTHIRLHTHE
                     TAGVSIACYLAALEAGVNGIDLAAAPVSGGTSQPDILTMMHALKGKDYDLGGLEEEKI
                     LRYEETLKDCLKEYFLPPEATMVNPLIPFSPMPGGALTANTQMMRDNNILDKFPQVIH
                     AMREVVEKGGFGTSVTPVSQFYFQQAFNNVMFGPWKKIAEGYGKMVLGYFGKTPVAPD
                     ANIIELATKQLNLEPTTELAINIADKDETKSIAYIKTLLEKEGIKTSEENIFIAAACK
                     EKGMAFLKGEAKVNVRKLTTMPKSASADENKFTVAVNGNKYHVEVSYGFDKDVNVKSV
                     KKVEKNENITSSNSTSSIDVENEVLAGISGNVFKIYINEGEEVKSGQAIIVLEAMKME
                     IEVNAPKDGIISKLCIKIGDTVNEGEVLAIYKN"
     gene            complement(10807..12147)
                     /locus_tag="RTF91_001011"
     CDS             complement(10807..12147)
                     /locus_tag="RTF91_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDZ4943902.1"
                     /translation="MRTYFSKVGFILAVAGGAVGLGNAWKFPTLSAENGGFVFVLLYL
                     FFTLTIGFSIFLAEVAMGRLSKSDLANAYSNLAIKYGNIWRYGGIFMLGGIFVLSFYL
                     VIMGWVLKYTVVSLYYLPKTLDEAADNFQNLITANLTSSVFFFVLSFFLTLLIVSKGL
                     IKGIEKLNVVIMPSLFLMLVFMLFYCIGFKQGFVKAFSYLFYPDFSYFKLSSIAEALG
                     LAFFTLCLGIGCIVTYSSALDKRTNFIKSSVYVVLINLLISFIIGLIVFTFIFEFGAD
                     PHTQGAGIVFVSLMSLFSQLGALGYIFAFCFFLALFFAGITSAVSMIEPLTFYMINNY
                     QISRIKALFFIGLFVFIFGICCILSLNLNFFSMFSFFGKDFFTLLDKLTSNFLLPLGA
                     IVCSIFVGFFMDKKQIYKIFSKFISRKIFSIWLFFIRFISPIAIILVMCYQIFV"
     gene            complement(12160..13494)
                     /locus_tag="RTF91_001012"
     CDS             complement(12160..13494)
                     /locus_tag="RTF91_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDZ4943903.1"
                     /translation="MSSKFSKIGFILAVAGSAVGLGNAWKFPTLVGQSGGSAFILLYI
                     ILTLGVGFVIFLAELSIGKISEKDPVNAYKKLAPSNKKAWSYVGFTMIGAILIVSFYT
                     LVIGWIVKYMFLSITGSLPMDLEASRAQFGFFISEDFLGQFICFTLVFLCVFYIVSKG
                     VKNGIEKLNVWMMPSLFILLIFMLVYACSKDGFIMAVKFLFVPDFSKINTSNVLEALG
                     LAFFSLSLGVGTIITYSASLSDKTNFITSTLNIIFINLLVGLLMGLVVFTFIFEFGYN
                     PNQQGPGLVFISLATLFEKLGIIGYIFGAAFFISLIFAGITSAVSMIEPFAFYLINTF
                     GMSRKKALILIGIVVYILGMLCILSSLKNTQFEFFGMSFFDLLDSISSKVIMPLGGIL
                     AAIFVGFVIKKEALKILFEPYMKGIFFELWYVFLRFISPLAVVIVMITAFLR"
     gene            13728..14066
                     /locus_tag="RTF91_001013"
     CDS             13728..14066
                     /locus_tag="RTF91_001013"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDZ4943904.1"
                     /translation="MKKVLFLLLACAAIAFAAETNAPVEQEAINVWIKAFSVLAAGLG
                     LGVAALGGAIGMGNTAAATIAGTARNPGLGPKLMTTMFIALAMIEAQVIYALVIALIA
                     LYANPFIVLQ"
     gene            14101..14186
                     /locus_tag="RTF91_001014"
     tRNA            14101..14186
                     /locus_tag="RTF91_001014"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14135..14137,aa:Leu,seq:gag)
     gene            complement(14667..18179)
                     /locus_tag="RTF91_001015"
     CDS             complement(14667..18179)
                     /locus_tag="RTF91_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[ACP]--phospholipid O-acyltransferase"
                     /protein_id="HDZ4943905.1"
                     /translation="MKQNSFLKIYGLIPFLLVAFINAFVDLGHKIIIQNTIYKAYEGS
                     EQLFLNAIANGLILLPFILILSPSGFLADKYPKNIVIKISAICNVMLTLIICVCYYNG
                     AFWTAFIFTFIMGIQAAIYSPSKYGFIKELVGKDFLAMGNGVINAVSIVAILVGMALF
                     SLSFESLYSSTYNQADEILKEVAPLGILLILFSCIEVFLAWRLPKLKQTNKDLVFNKK
                     KYFRGKLLINNLKLVFKNKTIWLCIIGISFFWAISQLYLVSFPVFAKNELFVENTFYV
                     QISLAFSGIGVILGSLIAGKFSKNYIELGLIPLGVLGIFLTAFLMPYFVSLLSYSFLF
                     FFFGFCGALFIIPLNTLIQFYAKENELGQILAGNNFFQNIAMLGFLVLATLFAKFEIN
                     VVYLFYFIILVTFLGSFYVLLRLPFSLVRMLLSIAFLQRYRLLVEGFENIPEKGGALF
                     LGNHISFIDWAVVQMAIPRKIYFVMERSIYSKWYIKFFLDKFGIIPVSSTGSKTSLEL
                     IAKHIKEGNLVCLFPEGTLSRHGQLNEFKAGFELACEHLNENDGKIIPFYIRGLWGSA
                     FSRSDEEFSTRNRTLNKRKIAIAFGKAMPLHSKKDEVKAKVFELSFMAWKSQCEAMYT
                     IARSWIDTAKKNLNQIAIIDALVGDISYRKMLTLSLFLNFFIKRKSKELNINPQRGSY
                     APKEEAIGILLPASFASSLINLSVLIANKIAVNLNFTAGEKALKAAIKNAQISQIYTS
                     KTFLEKLANKGININFDTNIHLIYMEDIIKDFKIQKAKIFSMMLAVSIIPSFILKTIF
                     TPSKNNLAIAAILFSSGSEGSPKGVMLNNRNILSNIAQISDVLCTRNNDVILSSLPPF
                     HAFGLTVTTFLPLLEGIKSITFADPTDALGVAKAVAKNNVTIMCGTSTFLGIYARNKK
                     LDALMFESLRIVVSGAEKLKNEVRTAFEMKFKKSIFEGYGATETTPVASVNLPNRFDA
                     DYWLIHRANKEGSVGMPLPGTAVRIVDPSNYENLKTNEDGLILIGGHQVMVGYLNDKE
                     KTDEVIKEIDGIRWYNTGDKGYLDEDGFLYIIDRYSRFAKIGGEMISLGAIEEEIAKF
                     IDTEVVKFCAASLEDEKKGEQIVLLIECDNDFFEGICEAIKNSNIPILFKPKHYFQIE
                     KIPLLGSGKVDLKRVKELAKNLVV"
BASE COUNT         6654 a         3052 c         2459 g         6030 t
ORIGIN      
        1 ggagaaaaaa cttttttaaa ataaatagtt tcaggaatta agtctgcatt accaacataa
       61 agccttccct tgtcatttaa aattctatga aatctctcca taagttttag ttttgattca
      121 tgatcgaaat aaataatcat atttctagaa actagaatat cgaattttcc caattttgaa
      181 aatttttctt caaaaacatt acaaagttca aatttacaag tgcaaagttc gtttttatta
      241 atagtataaa atttatcttc attttctaga aaaaatcttc ttttttcatt ctcgctcaat
      301 cgttgtaaag ttcttccttg atattttcca agctttgctt tttcaatcac gcttgaatta
      361 atgtcaatgc ctaaaatata catatcttta acaaaattct gtgcagccaa taatgctaaa
      421 gaatatacct cttctccact tgaacaagga gcacttaaga tattcgctct cctttctagg
      481 cttttagcat aataaactat ttcctttaat tgagccaatt ctcttaaaaa ataagtttca
      541 cctatagtta caaaatctaa agtttcttgc ttaagctgtc tattgctttt taattttgcc
      601 aaaaaatctg aaaaattttt agtattagtt ccttcaagga atttacttaa ctttaaagct
      661 agtatatttt tcttatcagt taaatcaata ccgctcattt cattaataat ttttataaat
      721 tcattaagtt ctaattcgct aggagtcgtt ttcttttcca taacaaaatt ccctttcgtt
      781 aatcttgatc aataaaattt ataatttctt ttttaatttc ttttaagctc atagatttta
      841 agtgtggatt catgtctttt gctctttttg gcatgccata aacgacgcta tctatttcat
      901 tttcacataa acatttaact cctgtcttgt aaagctcaaa taaacctttt gcgccatcat
      961 ctcccatgcc tgttaaaata atagcaagta ttttatttgt ctttgctaaa gaaacagcag
     1021 aattgaaaag taaatctacg cttggtttaa aacttgaaac cacatcttgc caagcagcta
     1081 caatatttaa atttccagac aaaatagtat ttttaggaca aatataaatt ttattaccta
     1141 acatctcttt atcatttaac aagcatactt cactaaaagc ctctttgtta aattgtccta
     1201 caaaagacgg aataaaacta gcactcatgt gttgagctat aactacacaa gtatttttta
     1261 tatcaatatc atttaaaaga aatttaagct gattagggcc acctgttgaa gatcctataa
     1321 gtatgagctt cattttcttc tccctttaat ttattgaaaa ttttattttt cttataatta
     1381 cataatttta acatatataa agaaaaataa agcttatttt taaaaaagaa aagctatttt
     1441 tatgatttaa tatggtaaaa ttaaattttt atcttatttc ataaatgtga gaaaccaatg
     1501 cttagggaaa aaatttatat tgctagcgat catgctggtt ttgaattaaa agagaaaatt
     1561 tgcttatttt tgaaagaaaa aaatataatt tttagcgatt taggaacaaa tacttacatg
     1621 agctgtgatt atcctgacta tgcacattta cttgcagaaa aaatagataa acaaagcttt
     1681 ggcattctta tttgtggaag cggaattgga atttctattg cagcaaatcg tcataacaat
     1741 attcgttgtg cattatgtca tgaaagttta agtgcagaac ttgcaagaaa acataatgat
     1801 gctaatgttc tagcacttgg cggaagatta attgggattg aattagctat aaacatcata
     1861 gaaaaattca tccaaactcc ttttgaagag ggaagacata tgcaaagaat tcaaaaaatt
     1921 gaggtaaaaa tataatgttt acaaactggc ttattttaac tatactaatt tgtggaacta
     1981 tttatctgat tgtaatgttg ttttattaca aaactctact taataaagaa ataacatcaa
     2041 aagattttat caaaaataat ctcgatgata ctgagattgt cattagaaaa ctacaaattc
     2101 aacttcaaag aagtcttgga aatatagata tacttacaga agaacttaat aaaattaaag
     2161 cagatcttac atctctaaga actagaaatt ctcaataccg tttagaaaat gataaactaa
     2221 gacaaagaat caaagaacta gaagcaaaaa ttgaggcatt attatgataa aactaacaca
     2281 aaaagagcaa aaatatctgc ttgataatat tagaattatt cctgattttc caaaaaaagg
     2341 aattattttt agagatatca ccactttgtt aaacaacaaa gaagctttaa atttcctact
     2401 caaacattta aaagaacgct ataaagatta taatctagat ttcatagcag gaacagaaag
     2461 cagagggttt atctttgcgt ctatgatttg cgcaaaactt gaccttcctt ttgcacccat
     2521 tagaaaacta ggaaaactcc cttttgaaac ctttagttgt gaatatgatc tcgagtatgg
     2581 tagtgataaa gtagaacttc ataaagatgc atttaaaaat attcaaaacg caagggtttt
     2641 gcttgtagat gatttaatag caactggtgg aacggccata gcttcacatg aactcattca
     2701 aaaagctggg gcacaatgtg tcgaagcctg ttttttaatg aatcttaaag atttaaacgg
     2761 agcaaataaa cttgaaaaac ttacttcaat ttatagtgtt ttagaaattt aaaactatag
     2821 aaaggtgcaa atggaagaat tcttaaaaaa tttactttac caatataaag atttagctta
     2881 tattattatt tttttatggt gtattttaga aggagaatta gctttaattt tagcaggtat
     2941 ttttgctcat caagggtatg taaatttagg ctttgttata tttatagcag gacttggtgg
     3001 ttttgtaggc gatcaaattt atttctatat aggaagatat aataaacggt atatacaaaa
     3061 aaaattaaaa acccaaaggc gtaaatttgc ggtagcacat ttgcttttac agcgctttgg
     3121 ttggcctatt attttcatac aacgctatat gtatggtttt agaaccatta tacctatgag
     3181 cataggaatt acacgctata gtgcaaaaaa atttgccatt attaatcttt ttagcgcttg
     3241 ggtttgggca tcaatcacta tacttttagc ctggtatttt ggagaacaaa tttggaaaat
     3301 ggtaagttgg gctgaggaac attggtacta tgcagccatt attatcgtag cttttttatc
     3361 tcttttattg tttggtttta aacaaatgga aaaagctata cttaaaaaca aaaggaaaag
     3421 atcatgaaat ttgaatttag cgataaaaaa ctagatatta taaaagcgga ttttgaactt
     3481 atttttatac aaaataaaaa tttaaaaaat ttcaacaaag aaaaagattt ttttaagctt
     3541 aataactaca aaggagaagg tactttgctg gatttaaaca gtaaaaagct ttatttagaa
     3601 cttaaaagcc ttgcctatga agatataagg ctaacccttt gcactgcata taaaaatctt
     3661 gaaaaactta atattaaaag cgtaaaactc cctagcatag taagcgattg tgcaattaga
     3721 agttttgcat ctttggttga aggtgtgctt tttggagctt ataaatttaa taaatataaa
     3781 agcgagaaaa aaacaagcac tttagaaaaa tttattattt caagcgaaga attaaatggc
     3841 aaaaaattca ataaaaacga agctaaaata ggcttagaac gtggagaaat tttagccaat
     3901 gctacaaatt ttaccaaaaa tatagtcaat gaaattcctg aaatttacac tcctttaaaa
     3961 atggcagaag atgcgcaaaa tttagctaaa gaaaataaaa atattacttg taaaatttac
     4021 gatgaaaaat ttttaactaa agaaaaaatg aatgcttttt tagcagtaaa tcgtgcctca
     4081 atacaccctc cacgcctcat tcatctaagc tataaagcta aaaatgcaaa aaaacgtgtt
     4141 gtatttgtcg gaaaaggctt aacttacgat agtggtggat taagtttaaa accggctgat
     4201 tttatgctta caatgaaagc tgataaaagc ggtgcagcag cagcaatggg aatcataaaa
     4261 gctgtagctg aacttgcttt agatttagaa gtgcattgta ttttaggcgc aactgaaaat
     4321 atgataggcg gcaatgctta taaacctgat gatgttttaa tcagtcgtga aggtgtaagc
     4381 atagaagtaa gaaatacaga tgctgaagga cgcttggtct tggctgattg tctttctttt
     4441 gcacaggatt taaaacctga tttacttatc gatatggcaa cacttactgg agcttgtgtt
     4501 gtaggacttg gagaatttac aagcgctatt atgggaaata acgaagaatt acaaaatgat
     4561 ttttatctaa gctctaaaaa aagtggagaa tatactacga ttttacactt caatccacat
     4621 ttaagagaac ttataaaatc aaatattgct gatgtaagca atactgcttc tagtcgctat
     4681 ggaggtgcaa ttaccgcagg actattttta gataatttta tacgcaaaga atataaagac
     4741 aaatggttac atcttgatat agcagggcct tcttacacag aaaaatcttg gggatattct
     4801 agttttggtg cgggtggcgc tggagttaga atgtgtgtta attatttaat tcaaatttta
     4861 ggaaaagcta aatgagttta agcgtaggta tagtaggact tccaaacgtt ggtaaatcaa
     4921 caacttttaa tgctttgacc aaagcacaaa atgcccaaag tgcaaactat cctttttgca
     4981 ccatagaacc caataaagcc atggttgaag tacctgattt gagacttaac gaacttgcta
     5041 aaatcgtaaa gcctgaaaga atcatgcatt ctttaataga atttgtagat attgctggac
     5101 ttgttaaagg tgcaagcaaa ggtgaaggtt taggcaataa atttctttca aatatacgcg
     5161 aaaccgaagt tattttgcat atagtgcgtt gttttgatga agaaaatatc actcatattg
     5221 aaggcggggt tgaaccttta cgtgatgtgg aaattatcaa cacagaactt attttagcgg
     5281 atattgaaca acttagtaaa aaaatagaaa aactcacaaa agaagcaaaa gcaaaccaaa
     5341 aaggtgctaa agaaaatctt gagcttgcaa attctttact tgatcattta aacaaaggtt
     5401 tatctgcaag ttcttatcct gaaaaagaaa gtgaaaatta tcaagcttta atcaaagaat
     5461 taagactgct ttctgctaaa gaagtaattt acggtgcaaa tgttgatgaa aatggtatta
     5521 gtgaagataa tgattatgta aaagctttaa aggaatacgc taaaaaaaat aatcatgaag
     5581 taattaaact ttgtgcaaaa atagaagaag aattagtagg attaagcgaa gaagaaagtc
     5641 atgaattttt aagttcttta ggagttaatg aaagtggtct tgatcaaatc atacgcacag
     5701 cttttgctaa attaggtctt ataagctatt ttactgctgg cgtgcttgaa gtgcgctctt
     5761 ggacaatcaa aaaaggctgg aaagcaccaa aagcagcgag cgtaattcac aatgactttg
     5821 aaaaaggctt tataaaagct gaagttattt cttatgaaga ttttatcacg cacaacggag
     5881 aaaacggtgc taaagaagca ggaaaactac gccttgaagg aaaagactac attgttttag
     5941 atggggatat aatacacttt aggtttaatg tttaggcaaa atagcctaaa caatgtttat
     6001 aaatttctaa taaaatcttc caaaatttga atttgatttt ccacacttgc gatagaactt
     6061 gagccttcgc tttgtttaga atttaaagaa atttcaaaat ttaaaagtgc catagccttt
     6121 tgatcaaata taggatctat ttttgaaaga tctttaattt cacttatatc aataccttgt
     6181 ttttcagctt gtgcaacaac atttcctact ataaaatgtg cttttctaaa aggaatattt
     6241 ttttcacgta ctaaataatc cgccaaatca gtagccaata aatgaccttt tttacaagca
     6301 ttaagcatat tttctttatt gatttgtatt tcttttaaca ttgcatttaa gataaccaaa
     6361 ctatctttag cagtttttac actatcaaaa agcccttctt tatcttcttg catatctttg
     6421 ttataggcta aaggtaaagc tttcattata gttaaaagag aaatcaaatt tccataaaca
     6481 cgccctgttt ttccacgtat aagctcacaa acatcaggat tttttttctg gggcataata
     6541 gaacttcccg ttgaaaaact atcacttata gttataaaag aaaattctga gcttgaaaat
     6601 aaaatcatct cttcacaaag tcttgaagta tgtgtaaaaa taactgctat atcgtaaagt
     6661 aaatcaagag caaaatccct atcgcttacc ccatccatag catttggcat aatatcttta
     6721 aaccctaaaa ttttagcact aaactcacga tttgtaatat aacttgttcc cgcacacgca
     6781 caagatccaa gcggtgaaaa gtctgcaagc tctaagctat tttgcaaacg cttaatatct
     6841 cgcatcaaca taaaagcata agctaaaata taaaaagaaa aacttacaag ctgagcatgt
     6901 tgtaaatgcg taaaactcgg cataatagtt tttttatgca ccttagcgtg atcaagcatg
     6961 gtttgaatta attcttttaa aagcttcata agttcaatat gggatttttt tacaaaaagt
     7021 ttaaaatcag tagccacttg atcatttcta cttcttgcag tatgaagtct tccgccaatt
     7081 tcactgccta taatttcact taaacgcttt tcaacggcca tatgaatatc ttcatcttta
     7141 atatcaaaaa caaatttatc ttgttctatt tcgcttttaa cttgctctaa tccttttatg
     7201 atggcatcta attcttcttt ttttaaaata ccacaacttt caagcattct agcatgtgct
     7261 atagaacctt gtatatcttc attaaacaaa tttttgtcta catttaaact tgcattaaat
     7321 tcttttaaaa gctcatcact tgcattgcta aaacgtcctg accacatttc atttttcatt
     7381 taaacacctt aatttttagg cccaaatttg ctaaattcaa tgccttcttt tatatcttca
     7441 tagcgtttga aattttgcac aaacatatgt gctaacttat ctcttgttgc aatataggca
     7501 tttttatcta cccaagtatt tataggattt aaaagcgcgc cttctacacc ttctaaagcc
     7561 tttggaatgg ctaaattaaa cacttcaaaa ttttcaaatt cacattttgt aatacttcca
     7621 tctaaaatgg cattaataca agccctggtt gctttaatac tcattctttt gcccacgcca
     7681 taacttccac cactccaacc tgtattaaca agataaacat taacttcata tttttcaatc
     7741 ttttcaccaa gtaatcttgc ataaactgtt ggatgcaaag gcataaaagg ttctccaaag
     7801 caagctgaaa aagttgcttg aggatctaca ataccgcgct cagttccagc tacttttgcc
     7861 gtataaccac ttaaaaaata atacatagcc tgttctttgc ttaatttgct tacagggggt
     7921 aaaattccaa aagcatctgc acttaaaaat ataatatttt ttggatgacc tgcttttaaa
     7981 ctaggctcat gattttcaat gtgctctata ggataagaaa ctcttgtatt ttctgttttt
     8041 gaagcatcag cataatcaac acttttatct gtttttaaaa ctacattttc taaaagtgca
     8101 ttttttttaa tcgcggcata aatttcaggc tcatgcttag gatcaagatt gattgttttt
     8161 gcatagcaac caccctcaaa attaaatata ccttcatcat cccaaccatg ttcatcatcg
     8221 cctataagcc ttctttttgg atcagtcgaa agcgtagttt ttccagttcc actaagtcca
     8281 aagaaaagcg ctacatcatt tttttctcct acatttgcac tacaatgcat agaaagttta
     8341 ttttccagtg gtaaccagta attcatcatg gaaaaaatac cttttttcat ttctccgcca
     8401 taccaagttc caccgataac tgctatattt tcttcaacat taaagattat aaaaacttct
     8461 gaatttaaac catcttcttt ataatcttca ttgatacatt tacaagcatt ataaacgata
     8521 aaatcagctt tgaaattttc aagttcttct tgacttggac gaataaacat atttttaaca
     8581 aaatgtgctt gccatgcgat ttcagtaaca aatcttattg ccttacggct ttgcaaagaa
     8641 gcaccacaaa aagcatcttg aacataaatt ttctttccac ttaatccttg ttttgcttta
     8701 gctaaaagct tattaaataa ttcctttgta ataggctgat ttatcttacc ccaagctata
     8761 tacttactag atggatcttg ttttacaaaa tacttatctt taggacttct acctgtaaaa
     8821 attcctgtat ctacacaaaa agtatcatta tctgtactta aaccttcgtt atttactttt
     8881 tcatgaatat ttaattcatc ataactcaaa ttatgaaaaa tttcttttat attatccaaa
     8941 cccaaattat caaatttctt catttttccc tcgccttaat ttttataaat agccaaaact
     9001 tcgccctcgt taaccgtatc gcctatttta atacaaagtt ttgaaataat tccatctttt
     9061 ggagcattta cttcaatctc cattttcata gcttctaaaa ctatgatagc ttgacctgat
     9121 tttacttctt caccttcatt aatataaatt ttaaaaacat tacctgaaat acctgctaaa
     9181 acttcatttt caacatctat agagcttgtt gaattagaag aagtgatatt ttcatttttc
     9241 tctacttttt ttacgctttt aacgttaaca tccttatcaa agccataact tacttctaca
     9301 tggtatttat taccgtttac agctacagta aatttgtttt catctgcact tgcagatttt
     9361 ggcatagtag ttaatttgcg tacatttact tttgcttctc cttttaaaaa tgccatacct
     9421 ttttctttgc aagctgctgc gataaatata ttttcttcgc ttgtttttat accttctttt
     9481 tcaagtaaag ttttgatata agctatgctt tttgtttcgt ctttatcggc tatgtttatg
     9541 gcaagctctg tagtaggctc taaattaagc tgttttgtgg caagttcaat gatatttgca
     9601 tcaggtgcaa ctggagtttt tccaaaataa ccaagcacca tttttccata accttctgca
     9661 atttttttcc aaggtccaaa cataacatta ttaaaagctt gttgaaaata aaattgagaa
     9721 actggagtta cagaagtgcc aaatccaccc ttttctacaa cttctctcat agcatgaatg
     9781 acttgtggaa atttatctaa gatattatta tctctcatca tttgtgtatt tgccgttaga
     9841 gctcctcctg gcataggaga aaaaggaata agtgggttta ccatggttgc ttcaggtggt
     9901 aaaaaatact cttttaagca atcttttaaa gtttcctcat atcttaaaat tttctcttct
     9961 tcaagtccac ctaaatcata atccttacct tttaaagcat gcatcattgt taaaatatca
    10021 ggttgagaag ttccaccact cacaggagct gcagccaaat caataccatt aacccctgct
    10081 tcaagcgctg caagataaca agctatactc acaccagcag tttcatgtgt atgaagtcta
    10141 atatgcgtgt cttgaggtaa aattcttcta gccattttaa tagtttcata aattttgttt
    10201 ggatttgaag ttccacttgc atctttaaaa caaatgctat ggaaaggaat ttctgctgtt
    10261 aaaatttctt ttaaagtttt ctcataaaaa gatacatcgt gagcaccttt acaatttagt
    10321 ggtaagtcca ttaaagtaac ggtaatttca tgttttaatc catgctttac tatacactca
    10381 ccactaaatt ttagattatt tacatcatta agagcatcaa aatttcttat cgttgtagta
    10441 ccatgctttg caaaaagttt tgcatgcaaa ttaacaagct ctctactccc agtatctaaa
    10501 gtaacagtat ttacacctct tgctaaagtt tgaagattag catcttttcc cacaatagct
    10561 ctaaatctat ccatcataac aaaggcatct tcattaagat aaaaatacaa gctttgaaat
    10621 ctagctccac caccaaattc aaagtgagta atacccgctt cttttgctgc ttctaccgca
    10681 ggaaagaaat catccatcaa aactctagct ccataaacag actgaaagcc atccctaaag
    10741 cttgtatcca ttacatcgat aaatttgtta gccattattt ttccttaaat aatatttttt
    10801 cattaattat acaaaaattt gataacacat taccaaaatt attgctatag gtgatataaa
    10861 acgaataaaa aacaaccaaa ttgagaaaat ctttcgactt ataaatttag aaaaaatctt
    10921 ataaatttgc tttttatcca taaagaaacc tacaaatata gagcatacta tagcaccaag
    10981 cgggagtaaa aaatttgaag tcagcttatc taataaagta aaaaaatcct tgccaaagaa
    11041 actaaacata gaaaaaaaat tcaaatttaa tgacaagatg caacaaattc caaaaataaa
    11101 aacaaataaa cctataaaaa ataaagcttt aatgcgagaa atttgatagt tattaatcat
    11161 ataaaaagtt aaaggctcta tcattgaaac agctgaagtg ataccagcaa agaaaagtgc
    11221 taagaaaaaa caaaatgcaa aaatataacc taaagctcca agttggctaa acaaactcat
    11281 taaagaaaca aaaacaattc cagctccttg agtatgtgga tcagctccaa attcaaaaat
    11341 aaaagtaaaa acaataagcc caataataaa agaaatcaat aaattaatca aaacaacata
    11401 cacagaactt tttataaaat ttgttctttt gtccaaagct gatgaatatg taactataca
    11461 acctattccc aagcataagg taaaaaatgc aagtcctaaa gcttcagcaa tagagctaag
    11521 tttaaaatat gaaaaatcag gataaaataa ataagaaaaa gcttttacaa agccctgttt
    11581 aaaccctata cagtaaaaca acataaaaac aagcattaaa aataagctag gcattataac
    11641 aacatttaat ttttcaattc ctttaatcaa gcctttagat actatcaaca aagtaagaaa
    11701 aaaagacaaa acaaagaaaa agacagagct tgttaaattt gcagtaatta aattttgaaa
    11761 attatccgct gcttcatcta gagttttagg aagataataa agactaacca cagtatattt
    11821 taaaacccat cccataataa ccagataaaa agagagaaca aaaataccgc ctagcataaa
    11881 aatgccgcca taccgccata tattaccata ttttatagca agattcgaat aagcatttgc
    11941 aagatcgctt ttacttaaac gccccatagc tacttcggcc aaaaaaatac taaaacctat
    12001 agttaaagta aaaaataaat ataaaagtac aaaaacaaaa ccaccatttt ctgcacttag
    12061 agttggaaat ttccaagcat tacctaaacc cacagctcca ccagcaacag ccagtataaa
    12121 gccgactttt gaaaaatatg ttctcattct tttacaaact catcttaaaa aagcagttat
    12181 cataactata acgacagcca aaggagaaat aaaccttaaa aatacatacc aaagttcaaa
    12241 aaatataccc ttcatataag gttcaaataa aatttttaaa gcttcttttt ttatcacaaa
    12301 tcccacaaaa atagctgcta aaattccacc taaaggcata ataaccttgc ttgaaatgct
    12361 atcaagcaaa tcaaaaaagc tcattccaaa gaattcaaac tgagtatttt ttaaagaaga
    12421 taaaatacat aacattccta aaatataaac aacaattcct atcaaaatca aagctttctt
    12481 acgactcata ccaaaagtat tgataagata aaaagcaaaa ggttctatca ttgaaacagc
    12541 tgaagtaata ccagcaaaaa ttaaagaaat aaaaaacgct gcaccaaaaa tataaccaat
    12601 tattccaagt ttctcaaata aggtagctaa ggaaataaaa acgagtcctg gtccttgttg
    12661 attaggatta taaccaaatt caaaaatgaa agtaaaaaca actaagccca ttaataaacc
    12721 aactaaaaga ttaataaaaa taatatttaa agtactagta ataaaattag ttttatcaga
    12781 taaactagca gaataagtaa taatcgttcc aacgcctaaa gaaagactaa aaaaagcaag
    12841 gcctaaagct tcaagaacat ttgaagtatt gattttagaa aaatcaggca caaaaagaaa
    12901 tttaaccgcc attataaaac catctttgct acaagcataa acaagcataa aaataagtaa
    12961 aataaataaa gaaggcatca tccaaacatt taacttttca atgccatttt taaccccttt
    13021 agaaacaata taaaaaacac acaaaaaaac caaagtaaaa caaataaact gacctaaaaa
    13081 atcttcactt ataaaaaatc caaactgagc tctgcttgcc tctaaatcca taggcaaact
    13141 tcctgtgata cttaaaaaca tatatttaac tatccaacca atcactaagg tataaaaaga
    13201 aacgatcaaa atcgctccta tcatagtaaa accaacataa gaccaagctt ttttatttga
    13261 aggcgctaac tttttataag cattaactgg atctttttcg ctaatctttc ctatgctaag
    13321 ctcagctaaa aatatcacaa aacccacacc tagagtaaga attatataaa gcaaaataaa
    13381 agcagatcct ccgctttgcc ctacaagtgt tggaaatttc caagcattac ctaaacctac
    13441 cgctgagcct gctaccgcta aaataaaacc tatttttgaa aatttagaac tcaatgttac
    13501 aaccttaact taaaaattat tttaaaatat tattaaagca aaaaaacttt taagctttat
    13561 tgaaaataat caaaatttaa atcaaaaatg tgaattttcg taaatttcaa taaaaataaa
    13621 gatactttta gctataattt ggatttattt ttaagtctta agtagggata cgcaagccga
    13681 actgatttaa aaatttaaat aataattttt atagaaaggt taagataatg aaaaaagttc
    13741 tttttttatt attagcatgc gcagcaatag cttttgcagc tgaaactaat gctccagtcg
    13801 agcaagaagc tatcaatgta tggattaaag cattttcagt tcttgcagca ggtttaggtc
    13861 ttggtgttgc agcacttggt ggtgctatcg gtatgggtaa taccgcagca gcaacgattg
    13921 caggaacagc tagaaacccg ggtcttggac caaaattaat gacaactatg tttatcgctt
    13981 tagcgatgat tgaagcacaa gttatctatg ctctcgttat cgcactaata gcactttatg
    14041 caaatccttt tatagttttg caataactta ttaaaaagcc tttttttagg ctttttttgt
    14101 gcggttatgg tggaattggt agacacgcca tcttgagggg gtggtgcgct ccgcgtgtgc
    14161 gagttcaaat ctcgctaacc gcaccagttt acctatatca ctttttagac cttttatact
    14221 ttactttaga aaatagagaa aaagtaagtt tccttgctaa tgttaaaaaa ttcttagttt
    14281 tccacctttt tttatctttg ctttttgtgc aagttgatta ctttacctga ttctctccta
    14341 ttcgtttatt tggtacttca gcaactcctg ttacactttt tactattagg tttaagactt
    14401 ggcttgataa caattaaaac ttctcataaa cccacaataa ttgttatctt tataaaaatg
    14461 attttagctt ctttattttt aggcttgttt aaaaatatta atttagaatt aaaaaaatct
    14521 actattgtta ttattataga aaatgcaact actctagcag aagtatggca atgaaagcta
    14581 aactaaatag caatttagcc attttggagt tctttttgct tttactccta ccacaatttt
    14641 aatttgggct ttgatataag ctcaaattat acaactaaat ttttggctaa ttccttcact
    14701 cttttaagat caaccttacc agaacctaag agtggaattt tctctatttg aaaataatgc
    14761 ttaggtttaa aaagtatagg tatattggaa ttttttatag cctcacatat tccttcaaaa
    14821 aagtcattat cgcattctat tagtaaaaca atttgctcac cttttttctc atcttctaaa
    14881 gatgcagcac aaaattttac cacttcagta tctataaatt ttgcaatttc ttcttctatg
    14941 gcacccaagg aaatcatctc tccaccaatt tttgcaaagc gagaataacg atcgataata
    15001 tataaaaagc catcttcgtc taaataccct ttatcgcctg tgttatacca tcttatacca
    15061 tcgatttctt tgataacttc atcggttttc tctttatcgt tgagataacc caccataact
    15121 tgatgaccgc ctataagtat cagcccatct tcatttgttt ttaaattttc ataattactt
    15181 ggatcaacaa tacgcaccgc agttccaggt aaaggcatac ccacgcttcc ttctttattg
    15241 gcacgatgta taagccaata atccgcatca aaacgattag gtaaattcac acttgctaca
    15301 ggtgtggttt ctgtagctcc ataaccttca aaaatgcttt ttttaaattt catttcaaaa
    15361 gcagttctta cttcattttt tagtttttca gcccctgaaa caactattct taaactttca
    15421 aacatcaaag catcaagctt tttatttctt gcataaattc ctaaaaaggt tgaagttcca
    15481 cacattatag taacattatt tttagcaact gctttagcaa ctcctaaagc atcagttgga
    15541 tctgcaaaag taatactttt aattccttca agtaaaggta aaaatgttgt tactgtaagt
    15601 ccaaaagcgt gaaaaggtgg taaagatgag agaataacat cattatttct tgtacaaagt
    15661 acatcagaaa tttgtgctat attacttaaa atattgcgat tatttagcat aacacctttt
    15721 ggagagcctt cacttccact actaaacaaa atagctgcta tggcaagatt gttttttgaa
    15781 ggagtgaaga tagttttaag tataaaacta ggaattatgc taactgctag catcatgcta
    15841 aaaattttag ctttttgtat tttaaaatct tttataatat cttccatata aattaaatgt
    15901 atgtttgtat caaaatttat atttatgcct ttgtttgcta atttttctaa aaaagtttta
    15961 gaagtataaa tttgtgaaat ttgtgcattt tttatagccg cttttaaagc cttttctcca
    16021 gctgtaaaat taagatttac tgcaatttta tttgcaatta aaacagataa attgatcaaa
    16081 gagcttgcaa aagaagcagg caacaaaatt cctatagctt cctctttagg agcataactt
    16141 ccgcgctgag gattgatgtt taattctttg gattttcttt taataaaaaa attaagaaac
    16201 aaactaagag taagcatttt tctataagaa atatctccaa ctagtgcatc tataatagct
    16261 atttggttaa gatttttctt agctgtatct atccaagatc ttgctatggt atacatagct
    16321 tcacattgtg atttccatgc cataaaagaa agctcaaaaa ccttagcttt aacttcatct
    16381 tttttagaat gcaaaggcat agccttacca aaagctatag caatttttct cttatttaga
    16441 gtgcgatttc ttgttgaaaa ttcttcatca cttcttgaaa aagcactacc ccaaagtcct
    16501 cgtatataaa aaggaataat ttttccatca ttttcattta aatgttcgca agccaattca
    16561 aatcctgctt taaattcatt taattgtcca tgacgcgaaa gtgtaccttc aggaaataag
    16621 caaactaaat taccttcttt tatatgtttt gcgatcaact ctaagcttgt tttacttcct
    16681 gtgcttgata caggaataat tccaaattta tcaagaaaaa atttaatata ccatttcgaa
    16741 taaatacttc tttccataac aaaataaatt tttcttggaa ttgccatttg cacaacagcc
    16801 caatcaataa aagaaatatg attacctaaa aacaaagccc cacccttttc tggtatattt
    16861 tcaaaacctt ctacaagcaa gcgatatcgt tgcaaaaaag ctatgcttaa aagcatacgt
    16921 accaaagaaa aaggaagtct taaaagtaca tagaaacttc ctaaaaaagt taccaaaata
    16981 ataaaataaa ataaataaac aacgtttatt tcaaatttcg caaataaagt tgccaaaact
    17041 aaaaacccca acatggcaat attttgaaaa aaattgtttc ctgcaagaat ttgtcctaat
    17101 tcgttttctt tggcgtaaaa ttggattaaa gtatttaaag gaataataaa aagagctcca
    17161 caaaaaccaa aaaagaaaaa taaaaaacta taacttaaca agcttacaaa ataaggcatt
    17221 aaaaaagctg ttaaaaatat acccaacaca ccaagtggaa taagtccaag ttctatataa
    17281 ttttttgaaa atttacctgc tattaaagaa cctaaaatca ctcctatacc agaaaaggca
    17341 agtgaaattt gcacataaaa ggtattttct acgaaaagtt catttttagc gaagacagga
    17401 aagctaacaa gataaagttg agatatagcc caaaagaatg aaattccaat tatacaaagc
    17461 caaatggttt tatttttgaa aacaagttta agattattta ttaaaagttt tccacgaaaa
    17521 tatttctttt tgttaaaaac taaatcttta tttgtctgtt ttagcttagg taaacgccat
    17581 gctaaaaata cttctataca agaaaataag atcaataaaa ttcctaaagg tgccacttct
    17641 tttaaaattt catctgcttg gttatatgtg gaactataaa gactttcaaa gcttaaagaa
    17701 aataaagcca ttcccactaa aattgctacg atgcttactg cattaattac accattaccc
    17761 atagcaagaa aatcttttcc tacgagctct ttaataaagc catatttgct tggagaataa
    17821 atcgctgctt gtattcccat aataaaagta aaaataaaag ccgtccaaaa agcgccgtta
    17881 taatagcaaa cacaaattat taaagtaagc ataacattgc aaattgctga aatttttatt
    17941 acaatatttt ttggatattt atctgctaaa aaacctgaag gggaaagtat aaggataaag
    18001 ggaagtaaaa ttaaaccatt ggctatagca tttaaaaata gttgttcgct tccttcatag
    18061 gctttataaa tagtattttg aataataatt ttatgtccta aatctacaaa agcattaata
    18121 aatgctacaa gtaaaaaggg gattaatcca taaattttta aaaaagaatt ttgtttcatt
    18181 atttaaacct cttga
//
LOCUS       DAPWAA010000032        16952 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.032, whole genome shotgun sequence.
ACCESSION   DAPWAA010000032 DAPWAA010000000
VERSION     DAPWAA010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16952
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.032"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            33..305
                     /gene="yajC"
                     /locus_tag="RTF91_001016"
     CDS             33..305
                     /gene="yajC"
                     /locus_tag="RTF91_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDZ4943906.1"
                     /translation="MAENSILTSLLPLVVLFAIFYFLVIRPQQKQAKAHKQMLESLQK
                     GDKIITNGGLICEVVKPEDDFIKVKLNEDNVTAKISREFIAKKIDA"
     gene            298..1878
                     /gene="secD"
                     /locus_tag="RTF91_001017"
     CDS             298..1878
                     /gene="secD"
                     /locus_tag="RTF91_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDZ4943907.1"
                     /translation="MRNSKINYRLIIFIVVFIFGVAFSLPSFLQSERGAKINLGLDLQ
                     GGLYMLLGVDNEEAVKSKIKSIASSLSYSFNKENILNDGLNIHDDILEFTLLDNADIA
                     KVEDLFKEIKGINVQNENMHYKISFTPEEVKNIENFALLQAVETIRNRLDQFGLAEPT
                     VAKQGDDKILVELAGIKTKEDELKAKERITKAAHLQLMEVDDSKMNQAATMSDAEAAS
                     YGLILVPDFRNPNLKYPLKSIPILDGSMLTDARVGLSDKSNYPVINFTLNAEGSKKFA
                     DYTGANVGKRLAIVLDNKIYSAPSINERIGGGSGQISGAFTQEEARDVAVALRSGALL
                     APVKLLEQRSIGPSLGADSIKMSMIALIGASVFIVVFMMMYYGVAGIFANIAMLVNVL
                     VVVAVMAMFGATLTLPGMAGLVLTVGMAVDANVIINERIRELLRDGVNIRTSIEQGYK
                     NAMSAIVDSNITSLVTSVALYAYGTGAVKGFAVTLGIGIVVSMITAILGTHGMFDYFM
                     QRIEKSNNTRFWFGYRRK"
     gene            1878..2849
                     /gene="secF"
                     /locus_tag="RTF91_001018"
     CDS             1878..2849
                     /gene="secF"
                     /locus_tag="RTF91_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDZ4943908.1"
                     /translation="MQFFSEKKIYDFMRMRFAAISLSFILFFGSIYLLWDRGLQYGID
                     FSGGTLIQLKYENAAPIAQIREILEKQGTFQNLSVTEFGSNEEVTIRFLGSNDNVSND
                     IGEYISTLLKDTGKFEVRRADVVGPKVGDELRNKGLMAIAISLIAILIYIALRFEWRF
                     ALAAIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKT
                     SKKSELAPIINESVSATLSRTVLTSGLTLATVVILYFFGGEMIQGFSLTLIVGIIIGT
                     LSSIFVASPTLLWFKFSVLEFRNKEIEKAKRKQDRERNRAMYEKGTV"
     gene            2860..5289
                     /locus_tag="RTF91_001019"
     CDS             2860..5289
                     /locus_tag="RTF91_001019"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDZ4943909.1"
                     /translation="MAYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSG
                     RIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYEN
                     MAYMKKELFSLGFSFSKKRMFATSDPLYTKFEQEFFIKMFEKGLIYTKEANVNWCEQD
                     QTVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEELLKDLEGLKDKWPNQVLTM
                     QENWIGKSEGLEFSLNLDEESKQKAKENSLEVFTTRADTIYGVSYIALAPEHKIVQNL
                     LSQNFLNQDLSNKIKAIQNQSLRERQSSEKEGYFLEIYAIHPLSGEKIPLWVANFVLA
                     DYGSGAVMAVPAHDERDFEFAKKYDLAIKQVIQTQENLPYTQKSGKLIHSQEFDGIDC
                     NEARLKIISQFEAKNIGKRVINFKIRDWGVSRQRYWGTPIPMIKCQNCGIVPQNLENL
                     PITLPEDVQITGEGNPLDKHPTWKNCICPKCGKEAQKESDTLDTFFESSWYFARFASD
                     EKTWQEKALDEKSVNYWMSVDQYIGGIEHAILHLLYARFFQKTLRDFGYLTQDEPFNR
                     LLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE
                     GSYRFICKFYDRAQNVKKGELLELKQENLSKEEKYARLKVYEALKKSEEVYYQSFAFN
                     TLIAACMEALNALALCKNEALEQEAFYIILNILEPIIPHVCFELSKELFDCKNFKKIE
                     LKEEVFVKDTLNLVVSVNGKKRAEFEISSNASKEEILALAKENTVKWLEGKSIVKEIY
                     VEGKLVNLVIK"
     gene            5286..5798
                     /locus_tag="RTF91_001020"
     CDS             5286..5798
                     /locus_tag="RTF91_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943910.1"
                     /translation="MKKILIFCIGLFLGACGYIPTSKITNNIFDEKVYVNVELNKQDP
                     KNSIYVADTLKEMVISKLGRKLALKHEADDIINVRMNNLEFIPLAYDKNGYVISYKAR
                     LNLDFNVIFKDGSSQTFSTNGSYNFEISPNSIISDSARYEAIRSASSEAFDEFISVIA
                     IKGQKRGSKY"
     gene            5782..7179
                     /locus_tag="RTF91_001021"
     CDS             5782..7179
                     /locus_tag="RTF91_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943911.1"
                     /translation="MVPNINEIAKQALIALKERKLKPTPENYTEIFEELSLKYGITSS
                     NKIKLDKYKTLLLPIYQQELNSKTIRSLEELISFLISVLNRQSGKQFSEFFDFLSTIS
                     KTLQISKDKKVRDLAKVTSIRISKTMDSESIYLLTKKWKELEKNYDENDLEEQTRKYG
                     ISKYDDYDSVIKKLLAKLEDRSYEYFSELLCLGLNPSLVEDLKIQSFMQNLTQKPFII
                     GEEGFKNELMEFINHRIMVDNMYVQKNLNFFNDNLKKIYELLILLNKSNEKNMDFINT
                     LKPDENGEVKLSFEDLKLKFKQLGEKITSLNNQIEFTQSLEERESWSVLKELDKMDEN
                     FNKYKVNYSLALFSIVNYRFIMEKYGMGSLNEIFVRFKKILKDSCTEFDELWMIDEKS
                     YLIVSPGKSKDEITQLVNTNLKTIENFRFIYKQDIISPKIHVAYLDKQSKPNINILDE
                     LIKQIAAVDEQYNQS"
     gene            7145..8329
                     /locus_tag="RTF91_001022"
     CDS             7145..8329
                     /locus_tag="RTF91_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDZ4943912.1"
                     /translation="MQQLMNNIIKVENFLAQKSTNYDKIDRFLMFRMYEKYKKYFKNI
                     PIIQLIGTNGKGSTGRYLTQLLENLNYTVGHYTSPHIFSFNERFYLNGKIANEEELQK
                     AHENLEGIFKQDLQKLSYFEYATFLAVILFQKCDFIILEAGVGGEYDATSVFERKMNI
                     FTRIGFDHIQILGNSLEDIARTKLKVMTPIALISDEQEENVLNLAQKIAFLKKANLQK
                     SSLNSLFKEDFEAYCEKFILPCFLKHNLKLALKACEILTSQEKTLKALKKLQALNLQG
                     RCQEISPNFFVDVGHNPMAAKAMLDKFQGEKINLIYNTYLDKDIFQILNTLKPIIDTI
                     QIYKYKSVERKLADDKIYSIALKLGIQCKEFRNLEENKKSLVFGSFMLVENFLKEWCG
                     KK"
     gene            8316..9218
                     /locus_tag="RTF91_001023"
     CDS             8316..9218
                     /locus_tag="RTF91_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDZ4943913.1"
                     /translation="MVKNKFTITITDINGSRHFYLNQIIKKIVFYTIAFIVLFLVFSS
                     FYIKYLDSKLSDISEKREELLKKSKELELSNSQMQKSIEEKTQQYAAIEDKIASFEEA
                     LGLEVENNLTISARLDNLHLTNEQQLEILRQIPNGWPIQNKGITGNFGWREHPLLKRR
                     EFHPGIDLRAEIGTPIYAPASGVVEFFGYSDNGYGYNVILLHNFGFKTVFAHMMRKEV
                     VKAGQFVNKGQLIGYSGNTGLSTGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQE
                     RRVPWQSLIKAVSAQHPTLAQKQQ"
     gene            9155..9550
                     /locus_tag="RTF91_001024"
     CDS             9155..9550
                     /locus_tag="RTF91_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HDZ4943914.1"
                     /translation="MAIFNKGSISPTSNSSSETTVISSGARIEGKFYFASMLHVDGEL
                     NGIIHSESIVVIGKNGNLKGELQADKIVVNGYFEGQLEANSLEILAGGVVNGDISIQK
                     ISIENGGRFNGTSKIKEDTIRLIENNNEE"
     gene            9550..12486
                     /locus_tag="RTF91_001025"
     CDS             9550..12486
                     /locus_tag="RTF91_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDZ4943915.1"
                     /translation="MQASFYEYLQNPKICELLLCKDDKQADLLAQVSRFKGLKTFVLP
                     DFRAQFGDDLRAFSKELFDLCKILNAYYKEEGKKILISPLNTVLKKLPSKKHLQNYLV
                     DKKQNFDSKFFEDEISRLGYEFVDIVQDKGEISIRADIIDIFCINEENPIRVLFFGEE
                     IESIRYFDLQSQKSSPNELDHFEICPFLKHFDKENYEIFKEKLEDFQSDTLIHDINSL
                     GFWCIDDFFDYLELDFLACEKFDPNEYEKDISFVNAKILPQAKKFKELQSFYNKDFFE
                     FHKNKKIILLAKNEALFKALELEDTQNIHFVKSDLRLNLIGPEKLIISLNQKEKQKTR
                     KKASLIIDELKNGDYIVHEDYGVGKFLGLEMIVVSGSKKEFVAIEYQNSDKLLLPVEN
                     LYLIDKYLGVSGSIPSLDKLGKTTFVKLKEKLKTKLLAIASEIVIMAAKRSLVQAKKI
                     KVDLSKQADFIANAGFIYTSDQDKACYEILQDFQSGKVMDRLLSGDVGFGKTEVAMNA
                     IYPVVESGFCAFLFAPTTLLSHQHYKTLKKRFTSFGIEVFKLDRFTSSAEKKQVLQNL
                     KENKACVVVGTHALLSVECENLALAIIDEEHKFGVKHKEKLKEITQNSHILSMSATPI
                     PRSLNQALSSIKSYSVLQIPPEDRMDVRTFVKENDDALLKEAIVRELRRGGQIFYIHN
                     HIASIEQCKKHLLELFSTLRILILHSKISAKIQEEEMLKFENKEYDLLLSTSIVESGI
                     DLPNANTIIVEKSDRFGMADLHQLRGRVGRSDKQAYCYFLIEDKNTITKDALKRLVSL
                     ESNSFLGAGSVLAYHDLEIRGGGNLLGVDQSGHIEQIGYSLYLKMLEDELNILSKNEV
                     DQKENKLDLKLNVNAFLNSELISKDRLRLELYRRLSKCKQVHEVYEIEGEIEDRFGKL
                     DVYTKQFLSLIIIKILALNKFKSISNYEQNIQFTALSDEKEFIKAKSQDDDDVLEAIL
                     RHLRKA"
     gene            12488..13249
                     /locus_tag="RTF91_001026"
     CDS             12488..13249
                     /locus_tag="RTF91_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ4943916.1"
                     /translation="MDWSKTYAAIYRARKDYLKPVFEIDPIALKDLIGMESQKKALYK
                     NTLNFIQNKGANHALLWGSKGTGKSSLIKAMFNEFKDQGLRLVELNKEDLFALADIID
                     EIRLEKFKFILFCDDFSFEKGDDSYKFLKPLLEGSIEKAPNNVIIYASSNRRHLLSES
                     INDNLDMQIRHAELHLSDAAEERLSLSDRFGLWLSFYQGNLDEYLKTIDFYFKDYSYD
                     KELLHAKAKEFATLRASRSGRTAKQFYLAFKESFK"
     gene            13246..13932
                     /locus_tag="RTF91_001027"
     CDS             13246..13932
                     /locus_tag="RTF91_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HDZ4943917.1"
                     /translation="MTGVQIFVKLLNLDLNYYDFDWLEDQGLSEFELLISVILTQNTN
                     WKNVLKALENLKKENITSLEQINTLSNLELAVLIKPSGFYNTKAKRLKNLVENILNVY
                     ENLENFKTNVSREWLLNIKGLGFESVDGILNYLCKREILVVDSYSLRLAFHLGYEFEN
                     YEELREFFQSGIENEQESLCEILGRKCELYELYQIFHALIVAFAKQSFKGQKLSSKGE
                     EWIKILKEDL"
     gene            13929..14741
                     /gene="thiD"
                     /locus_tag="RTF91_001028"
     CDS             13929..14741
                     /gene="thiD"
                     /locus_tag="RTF91_001028"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDZ4943918.1"
                     /translation="MKAKGSELIPVLTIAGSDCSGGAGIQADLKTFSAHNLFGMSVLL
                     SVVAENTTRVISVHDVPTQSVDEQMLAVFEDIVPKATKIGMIGTCELMSCVAKNLSEF
                     KPQNVVIDPVMFAKNGYALMPEENCDFFKQTIVKFADILTPNIPEAEFLCGFKIANEE
                     QMIKAAKHLRGLGAKAVLIKGGHSEENANDVLFDGKEIYILKGERLETKNTHGTGCTL
                     SSAIASNLAKGKDLFNAVSEAKEYVRSAIYYSLNLGKGCGPTNHFFKFLDEK"
     gene            14731..15363
                     /gene="thiE"
                     /locus_tag="RTF91_001029"
     CDS             14731..15363
                     /gene="thiE"
                     /locus_tag="RTF91_001029"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDZ4943919.1"
                     /translation="MKNKLDLSLYLVASKGNKSEECFLNSLENAIKGGVSIVQLREKE
                     LSASEFYKLGLKVQKLCKAYKIPFLINDRIDIALALDADGVHLGQEDLEIKLARKLLG
                     DEKIIGLSLKKLEQLEFIQGANYLGCGAIRATPTKESSLLSLKLLAQICDKSPIGVVA
                     IGGIDKEVLSELKGIKLSGVAVVRAIMDAKDVYLAAKELKCKIHENLSLK"
     gene            15341..15970
                     /locus_tag="RTF91_001030"
     CDS             15341..15970
                     /locus_tag="RTF91_001030"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDZ4943920.1"
                     /translation="MKIYLLNESPFEGVENLILNEIVFYNFSVDLSGYDALICTSKNA
                     LKALQNANIALNFKLNLYVVGQSTAQYARNLGFKKIKIPSKAYGRDLFLEFKEELKIK
                     KCLYLRAKNIVSTLNLDLKNAGVDLDEIIVYENVFKKSDKKLTHPAIFIFTSPLSVEN
                     FLKFYSLKEQDKVVVIGQSTAKKFLNFKNLFICENQNLQECVKLAQTLI"
     gene            complement(15967..16419)
                     /locus_tag="RTF91_001031"
     CDS             complement(15967..16419)
                     /locus_tag="RTF91_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943921.1"
                     /translation="MKKAYVLIWTIFLILLISLWMSLTLNISGYTPKIIQDSYYYLQA
                     QILSHNATQFSKYFLYQAKQENKECLDDIHFNYAKALIKIKYFYPIAQCINFKFSNFN
                     SDANLSKDGVIIAHISIALNRNRNVNDEILLTKSIIIYPKEFFWDLKN"
     gene            complement(16416..>16952)
                     /locus_tag="RTF91_001032"
     CDS             complement(16416..>16952)
                     /locus_tag="RTF91_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943922.1"
                     /translation="NLIIQTHLNLLKIEKLIQNCINITFSQNTLKCLLKDELISLKNN
                     KLYLVNSTLILENNHTLYSPHSDFKTQLQNRKDLYNDNEHIIYALKMNKIERISILEN
                     GIFTNFMGNFIPLQAQLIIKLQNEELIYEIKPKFNEQLNQQGLISKNISSFSLQNNKL
                     KICLKKQMRYCLEKRILL"
BASE COUNT         6172 a         1876 c         3105 g         5799 t
ORIGIN      
        1 agtgtttaat ttttttggaa taaaggaaaa atatggcaga aaattcaatt ttaacttcat
       61 tgttacctct tgtagtatta tttgcaattt tttatttctt ggtgattaga ccacaacaaa
      121 aacaagcaaa agcgcataaa caaatgcttg agtctttgca aaaaggagat aaaatcatca
      181 ctaatggcgg acttatttgt gaagtcgtaa aaccagagga cgattttatc aaagttaagc
      241 ttaatgaaga caatgttact gcaaaaattt caagagaatt tatagcaaag aaaattgatg
      301 cgtaattcta aaatcaatta tcgcttgatt atttttatag tggtatttat ttttggagtg
      361 gctttttcac tcccttcttt tttgcagtca gaacgtggtg caaagattaa cttaggactt
      421 gatttgcaag gtggacttta tatgctttta ggcgtagata acgaagaagc tgtaaagtca
      481 aaaataaaat caattgcatc ttcattgagt tattctttta ataaagaaaa catcttaaat
      541 gatggtttaa atattcatga tgatattttg gaatttacct tacttgataa tgcagatatt
      601 gcaaaagttg aagatttatt taaagaaata aaaggaatta atgtgcaaaa tgaaaatatg
      661 cactataaaa tttcttttac tccagaagaa gtaaaaaata tagaaaattt tgcacttttg
      721 caagcagttg agactataag aaataggctt gatcaatttg gtttagcaga gccaacagtt
      781 gctaaacaag gcgatgataa gattttggtt gaacttgctg ggattaaaac caaagaagat
      841 gaactaaagg caaaagaacg cattacaaaa gcagcgcatt tgcaacttat ggaagttgat
      901 gattctaaaa tgaatcaagc tgctacaatg agtgatgctg aagcggcaag ctatggactg
      961 attttagtac ctgattttag aaatccgaat ttaaaatatc ctttaaaaag tatacctatt
     1021 ttagatgggt ctatgcttac tgatgcaaga gtagggctta gtgataagag taattatcct
     1081 gtgattaatt ttactttaaa tgctgaaggt tctaaaaaat ttgctgatta tacgggagca
     1141 aatgttggaa agcgtcttgc tattgtgctt gataataaga tatattctgc cccatctatt
     1201 aatgaacgca taggtggcgg tagtgggcaa atcagtggag cctttactca agaagaagcg
     1261 cgtgatgtgg ctgtggcttt aagaagtgga gccttgcttg cgcctgtaaa attacttgaa
     1321 caaagaagta taggaccatc tttaggtgct gatagtatta aaatgagtat gatagcctta
     1381 attggtgcgt ctgtttttat tgtagtattt atgatgatgt attacggtgt agcagggatt
     1441 tttgcaaata tcgcaatgct tgttaatgtt ttggtagttg ttgcggttat ggctatgttt
     1501 ggagcaactc ttactttacc aggaatggca gggcttgttt taactgtagg aatggcagta
     1561 gatgcaaatg tgattattaa tgagcgtata cgtgaactct tacgagatgg agtgaatata
     1621 agaaccagca tagaacaagg ttataaaaat gctatgagtg cgattgtaga ttcaaatatt
     1681 acttctttag ttacttcggt ggcactttat gcttatggaa caggagcggt taaaggtttt
     1741 gctgtaactt tgggaattgg tattgttgtt tctatgatta cggctatttt aggaactcat
     1801 ggaatgtttg attattttat gcaacgcata gaaaaaagca ataatacaag attttggttt
     1861 ggttatagga gaaaataatg caatttttta gtgagaagaa aatttatgat tttatgagaa
     1921 tgcgttttgc tgctatttcc ctttctttta ttttattttt tggatctatt tatttacttt
     1981 gggatagggg tttgcaatat ggtattgatt ttagtggagg aactttaatt cagcttaaat
     2041 acgaaaatgc agcacctata gcacaaatcc gagaaatttt agaaaagcaa ggaacttttc
     2101 aaaatttatc tgtaactgaa tttggaagca atgaagaagt aacgatacgc tttttgggaa
     2161 gcaatgacaa tgtaagcaat gatataggcg aatatataag tactctttta aaagatacgg
     2221 gaaaatttga agtgcgtcgt gccgatgtag tgggtccaaa agtaggtgat gagcttagaa
     2281 ataaaggact tatggctata gctatatctt tgatagcgat tttaatttat atagcattgc
     2341 gttttgaatg gcgttttgct cttgcagcta taattagcga aattcacgat gttgtgatta
     2401 ctttaggggc aatttcttta tttaaaattg atgtaaattt agatacttta gctgctgttt
     2461 taactgtact tggatattct ttgaatgata caattattat ttttgataga atcagagaag
     2521 gtattaaaac aagtaaaaaa agtgaacttg cgccaattat caatgaaagt gtttcagcaa
     2581 ctttgtcaag aacggtttta acttcaggac ttactttggc aacagttgtg atactttatt
     2641 tctttggtgg ggaaatgata caaggatttt ctttaacttt aattgtaggt attataatag
     2701 gaactttaag ctctattttt gttgcaagcc cgactttact atggtttaaa tttagtgtgc
     2761 ttgagtttag aaacaaagaa attgaaaaag caaaaagaaa gcaagataga gaacgtaatc
     2821 gtgcaatgta tgaaaaagga acagtataag gagaaattta tggcttatga agcaagttta
     2881 atagaaaaaa aatggcaaaa aatttgggat gaaaatgaat attttgagcc aaaagatgat
     2941 ttaaatttgc ctaaaaaata cattttatca atgtttcctt atcctagtgg ccgtattcat
     3001 atgggacatg taagaaatta tactataggt gatgctttgg caagatatta tcgcaaaata
     3061 ggatttaatg tcttacatcc tataggtttt gatagttttg gtatgcctgc tgaaaatgca
     3121 gcaatcaagc ataaaatcca tcctaaatca tggacttatg aaaatatggc ttatatgaaa
     3181 aaagagcttt tttctttagg tttttctttt tctaaaaaaa gaatgtttgc aacttcagat
     3241 ccactttata caaaatttga gcaagaattt tttatcaaaa tgtttgaaaa aggtttgatt
     3301 tataccaaag aagccaatgt aaactggtgt gaacaagatc aaactgtttt agctaatgag
     3361 caagttgaag atggaaaatg ttggcgttgt ggtcatgaag tagtgcaaaa aaaaatgcca
     3421 ggttattatg taaaaattac tgcttatgct gaggagcttt taaaggattt agaaggatta
     3481 aaagataagt ggcccaatca agttttaacc atgcaagaga attggatagg taaaagtgaa
     3541 ggtttagaat tttctctaaa tttagatgaa gaaagcaagc aaaaagccaa agaaaattct
     3601 ttagaagttt ttactacaag agcggataca atttatggag tttcttatat tgctttagcc
     3661 ccggaacata aaatcgttca aaatttactt tctcaaaatt tcttaaatca agatttatca
     3721 aataaaatta aagccataca aaatcaaagt ttaagagaaa gacaaagttc tgaaaaagaa
     3781 ggttattttt tagaaattta tgctattcat cctttaagtg gagaaaaaat tcctttatgg
     3841 gtagcgaatt ttgttttggc tgattatggt agtggagcag ttatggctgt tccagctcac
     3901 gatgaaagag attttgaatt tgcaaaaaaa tatgatcttg ctattaaaca agtgattcaa
     3961 actcaagaga atttacctta tactcaaaaa tcaggaaaat taatccatag tcaagaattt
     4021 gatggtattg attgtaatga agcaagatta aaaattattt ctcagtttga agctaaaaat
     4081 attgggaaga gagttataaa ttttaaaatt cgtgattggg gtgtttcgcg tcaaagatat
     4141 tggggtacgc ctattcctat gattaaatgt caaaattgcg gtatagtgcc tcaaaattta
     4201 gaaaatttac ctattacctt gcctgaagat gtgcaaatta ctggagaggg taatccgctt
     4261 gataagcatc caacttggaa aaattgtatt tgtccaaaat gtggtaaaga ggctcaaaaa
     4321 gaaagtgata ctttagatac tttttttgaa agttcttggt attttgcacg ttttgcaagt
     4381 gatgaaaaaa cttggcaaga aaaagctttg gatgaaaaaa gtgtaaatta ctggatgagt
     4441 gtggatcaat atataggtgg tattgaacat gcgattttac atttgcttta tgcgagattt
     4501 tttcaaaaaa ctttaagaga ttttggttac ttgacacaag atgaaccttt taataggctt
     4561 ttgacccagg gtatggtgtt aaaagatggt gctaaaatgt caaaatctaa aggcaatgtt
     4621 gtagatcctg atgagatcat agaaaaatat ggtgctgata cagcaagact ttttatactt
     4681 tttgctgcac ctccggctaa agaacttgaa tggaatgatg atgcagttga aggatcttat
     4741 agatttattt gcaagtttta tgatagggca caaaatgtta aaaaaggtga gcttttagaa
     4801 ttaaaacaag agaatttaag taaagaagaa aaatatgcaa gattaaaagt atacgaagct
     4861 ttgaaaaaat ctgaagaagt ttattatcaa agctttgctt ttaatacttt aatcgcagct
     4921 tgtatggaag ctttaaatgc tttagcgctt tgtaaaaatg aggctttaga gcaagaagct
     4981 ttttatatta ttttaaatat tttagagcct attattcctc atgtttgctt tgaacttagc
     5041 aaggagcttt ttgattgtaa aaatttcaaa aaaatagaac tcaaagaaga agtttttgta
     5101 aaagatactt taaatttagt tgtaagtgtt aatggtaaaa aaagagctga atttgaaatt
     5161 tcaagtaatg caagcaaaga agaaatttta gcacttgcaa aagaaaatac tgtaaaatgg
     5221 cttgaaggta aaagcatagt aaaagaaatt tacgtggaag gaaaactagt taatctagta
     5281 atcaaatgaa aaagattttg attttttgta taggtttatt tttgggtgct tgtgggtata
     5341 ttcctacttc aaaaattact aataatattt ttgatgaaaa agtttatgtt aatgttgaat
     5401 taaataagca agatccaaaa aatagtattt atgttgctga tactttaaag gaaatggtga
     5461 tttcaaaatt agggcgcaag cttgctttaa aacacgaggc tgatgatata atcaatgtaa
     5521 gaatgaataa tttagaattt attcctttag cttatgataa aaatggttat gttattagtt
     5581 ataaagctag gttaaattta gattttaatg ttatttttaa agatggttca agccagactt
     5641 ttagtacaaa tggaagttat aattttgaaa tttctccaaa tagtattatt agcgattctg
     5701 caagatatga agctattcga tcggcttcaa gtgaggcgtt tgatgagttt atttctgtaa
     5761 ttgctattaa agggcaaaaa cgtggttcca aatattaatg aaatagcaaa acaagcttta
     5821 atcgcattaa aagaaagaaa gttaaagcca acccctgaaa attatacgga aatttttgaa
     5881 gaattatctt taaaatatgg tattacaagt tcaaataaga ttaaacttga taaatacaaa
     5941 accttacttt tgccaattta tcagcaagaa ttaaattcta aaactatacg gagtttagag
     6001 gagttaatca gttttttaat ttctgtttta aatagacaaa gcggaaagca atttagtgaa
     6061 ttttttgatt ttttatccac catatctaaa accttgcaga taagtaaaga taaaaaggtg
     6121 agagatttag ctaaggtgac ttcgattaga atttctaaaa caatggatag tgaaagtatt
     6181 tatttgctta ctaaaaaatg gaaggaactt gaaaaaaatt atgatgagaa tgatttagag
     6241 gaacaaactc gcaaatatgg cattagtaaa tatgatgatt atgatagcgt gattaaaaaa
     6301 cttttagcta aacttgaaga tcgtagttat gagtatttta gtgaattatt gtgtttgggt
     6361 ttaaatcctt cattggtgga agatttaaaa attcaaagtt ttatgcaaaa tttaacacaa
     6421 aagcctttta taataggcga agaaggtttt aaaaacgagc taatggaatt tatcaatcat
     6481 cgcataatgg ttgataatat gtatgttcaa aaaaatttaa atttttttaa tgataatttg
     6541 aaaaagattt atgagttact tattttgctt aataaatcaa atgaaaaaaa tatggatttt
     6601 atcaatactt taaagcccga tgaaaatggg gaagtaaaac ttagctttga agatttgaaa
     6661 ttgaaattta aacaacttgg agaaaaaatt acatctttaa ataatcaaat tgaattcacg
     6721 caaagcttag aagagagaga gtcttggagt gtccttaaag aacttgataa aatggatgaa
     6781 aattttaata aatacaaggt taattattct ttagctttat tttctatagt aaattatcgt
     6841 tttattatgg aaaaatatgg catgggaagc ttgaatgaaa tttttgtgcg atttaaaaaa
     6901 attctaaaag attcttgtac tgaatttgat gaactgtgga tgatagatga aaagagttat
     6961 ttgattgttt cgccagggaa aagtaaagat gaaattactc agcttgtaaa tacaaatctt
     7021 aaaactatag aaaattttag atttatttat aaacaagata ttataagccc taaaattcat
     7081 gtagcttatc ttgataaaca aagtaagcca aatattaata ttttagatga gttaataaaa
     7141 cagattgcag cagttgatga acaatataat caaagttgag aattttttag ctcaaaaaag
     7201 cacaaattac gataaaatcg atcgtttttt gatgtttaga atgtatgaaa aatataagaa
     7261 atatttcaaa aatattccta taatccaact tataggtaca aatggtaaag gcagtacggg
     7321 tagatattta acccaacttt tagaaaattt aaattataca gtcgggcatt acactagtcc
     7381 acatattttt agttttaatg aaagatttta tcttaatggt aaaattgcaa atgaagaaga
     7441 attgcaaaaa gctcatgaaa atcttgaagg aattttcaag caagatttgc aaaaactaag
     7501 ttattttgaa tatgctactt ttttagctgt aattttattt caaaaatgtg attttatcat
     7561 tttagaagcg ggggtaggtg gggaatatga tgctacttct gtttttgaaa gaaaaatgaa
     7621 tatttttaca agaattgggt ttgatcatat tcaaatttta ggaaattctt tagaagatat
     7681 tgcaagaact aaactcaaag ttatgacacc tatagcactt ataagtgatg agcaggaaga
     7741 aaatgtttta aatttagcac aaaaaattgc ttttttaaaa aaagccaact tgcaaaaatc
     7801 ttccttaaat tctttattta aagaagattt tgaggcttat tgtgaaaagt ttattttacc
     7861 ttgtttttta aagcacaatt taaaacttgc attaaaagct tgcgaaattt taacttcaca
     7921 agaaaaaact ctaaaagctt tgaaaaagtt acaagcatta aatttgcaag gaagatgtca
     7981 agaaatttcc cccaattttt ttgttgatgt aggtcataat cctatggctg ctaaggctat
     8041 gcttgataaa ttccaaggag aaaaaataaa tctcatttat aatacttatt tagataagga
     8101 tatttttcaa attttaaata cattaaagcc tattattgat acaatacaaa tatataaata
     8161 taaaagtgta gaacgaaagc tggctgatga taaaatttat agtattgcat taaagctagg
     8221 tatacaatgt aaagaattta gaaatttaga agaaaacaaa aaaagtctag tttttggttc
     8281 ttttatgtta gtggaaaatt ttttaaagga gtggtgtggt aaaaaataaa ttcactatta
     8341 ctattacaga tattaacggc tcaagacatt tttatttaaa tcaaataatc aaaaaaatag
     8401 ttttttatac tattgctttt attgttttat ttttagtttt tagtagtttt tatatcaaat
     8461 atcttgatag caagcttagt gatatcagtg aaaaacgtga ggaacttttg aaaaaaagca
     8521 aagaattaga attatctaat tcgcaaatgc aaaaaagtat agaagaaaaa actcagcagt
     8581 atgcagctat agaagataag atagcttctt ttgaggaagc tttgggttta gaggtagaaa
     8641 ataatcttac aattagtgca agacttgata atcttcacct taccaatgaa cagcaacttg
     8701 aaattttaag acaaattcct aatggatggc ctattcaaaa taaaggtatt acgggaaatt
     8761 ttggttggag agagcatcca cttttaaaaa gaagagaatt tcatcctggc attgacttaa
     8821 gagccgaaat tggcactcct atttatgcgc ccgcaagtgg ggtggtggaa ttttttggtt
     8881 atagtgataa tggttatggc tataatgtaa ttttattaca taattttggt tttaaaacag
     8941 tatttgctca tatgatgcgt aaggaggtag ttaaagcagg tcaatttgtt aataagggac
     9001 aattaatagg ttatagtggc aacacgggtc tttctactgg accacattta cactatgagg
     9061 taagatttat caataaaact ttagaacctt tgtatttttt aaatttgcaa agaaaaaata
     9121 tgaatgattt ttttaatcaa gaaaggagag ttccatggca atctttaata aaggcagtat
     9181 cagcccaaca tccaactcta gctcagaaac aacagtaatt tcttcaggtg ctagaattga
     9241 gggtaaattt tattttgctt ccatgcttca tgttgatggt gaattaaacg gtattattca
     9301 ttctgaaagt attgttgtta tcggaaaaaa tggaaattta aaaggcgaat tacaagcgga
     9361 taaaattgta gtaaatggtt attttgaagg acagcttgaa gctaatagtt tagaaatttt
     9421 agcaggtgga gttgttaatg gcgatatttc aatacaaaag atttctatcg aaaatggtgg
     9481 tcgctttaat gggactagta aaatcaaaga agatactatt agacttattg aaaataacaa
     9541 tgaagaataa tgcaagcttc attttatgaa tacttacaaa atccaaaaat ttgtgaactt
     9601 ttgctttgca aagatgataa acaagcagat ttacttgctc aagtttcacg atttaagggt
     9661 ttaaaaacct ttgttttacc tgactttagg gcgcagtttg gagatgattt aagggctttt
     9721 tctaaagaac tttttgatct ttgcaagatt ttaaatgctt actacaaaga agaaggaaaa
     9781 aaaatcctta tttctccttt aaatactgtt ttaaaaaagc ttccttcaaa aaaacattta
     9841 caaaattatc ttgtcgacaa aaaacaaaat tttgattcta aattttttga agatgaaatt
     9901 tcaaggttgg gctacgaatt tgtagatata gttcaggata agggtgaaat ttcaatccgt
     9961 gcagatatta ttgatatttt ttgtatcaat gaagaaaatc ctatcagagt tttgtttttt
    10021 ggcgaagaga ttgaaagtat aaggtatttt gatttgcaaa gtcaaaaatc tagtcctaat
    10081 gaattggatc attttgaaat ttgccctttt ttaaaacatt ttgataagga aaattatgaa
    10141 atttttaagg aaaaattaga agattttcaa agtgatactt taatacacga tattaattct
    10201 ttaggatttt ggtgcattga tgattttttt gattatttgg aacttgattt tttagcttgt
    10261 gaaaaatttg atcctaatga atacgaaaaa gatataagct ttgtgaatgc aaaaatttta
    10321 cctcaagcta aaaaatttaa agaattacaa agtttttata ataaagattt ttttgaattt
    10381 cataaaaaca aaaaaattat acttttagct aaaaatgaag ctttatttaa agctttagag
    10441 cttgaagata cgcaaaatat ccattttgta aaaagtgatt taaggcttaa tcttattggt
    10501 cctgaaaaat tgatcatttc tttaaaccaa aaagaaaaac aaaaaacaag aaaaaaagct
    10561 agcttgatta tagatgagct taagaatggg gattatatag tacatgaaga ttatggagta
    10621 ggtaaatttt taggccttga aatgatagtg gtaagtggat caaaaaaaga gtttgttgcc
    10681 atagagtatc aaaattctga taagcttttg ttaccagtgg agaatcttta tttgattgat
    10741 aaatatttgg gtgtaagtgg ttctattcca agtttagata aattaggtaa aacaaccttt
    10801 gttaaactta aagaaaagtt aaaaactaaa cttcttgcta tcgcttctga aattgttatc
    10861 atggcagcaa aaagatcttt agtgcaagca aaaaaaatca aagtagattt aagtaaacaa
    10921 gctgatttta tagctaatgc ggggtttatt tatacaagcg atcaagataa ggcttgttat
    10981 gaaattttgc aagattttca aagtggaaaa gtcatggata gacttttaag tggcgatgtg
    11041 ggttttggaa aaactgaagt agctatgaat gctatttatc ccgtggttga aagcggattt
    11101 tgtgcatttt tgtttgcacc tactacttta ctttctcacc agcattataa aaccttaaaa
    11161 aagcgtttta cttcttttgg tatagaagtt tttaaactcg atcgctttac aagtagtgcg
    11221 gagaaaaaac aagttttgca aaatttaaaa gaaaataaag cctgtgtggt tgtaggaact
    11281 catgcacttt tgagcgtgga atgtgaaaat ttggctcttg ctattattga tgaagaacat
    11341 aaatttggag taaagcataa agaaaaactt aaagaaatta cccaaaattc acatatttta
    11401 tctatgtcag ctacacctat accaagaagt ttaaatcaag ctttaagttc tataaagtct
    11461 tatagcgtct tgcaaattcc accagaagat agaatggatg taagaacctt tgttaaagaa
    11521 aacgatgatg cacttttaaa agaagccata gtaagagaac taaggcgtgg tgggcaaatt
    11581 ttttacattc ataatcatat cgcaagtata gagcagtgta aaaaacattt attagagctt
    11641 ttttctactt tacgtatttt gattttacat tctaagataa gtgctaagat acaagaagaa
    11701 gaaatgttaa aatttgaaaa taaagaatat gatttgcttt taagtacttc catcgtagaa
    11761 agcgggattg atttacctaa tgcaaatacc attatagtag aaaaaagcga tcgttttggt
    11821 atggctgatt tacaccaatt gcgtgggcgc gtgggaagaa gtgataaaca agcttattgt
    11881 tattttttaa tcgaagataa aaatactatc acaaaagatg ccttaaagcg tcttgtttct
    11941 ttagaaagta attctttttt aggtgcagga tctgttttgg cttatcatga tcttgagatt
    12001 cgtggcggtg gaaatttatt gggggtagat caaagcggac atattgagca aattggatat
    12061 agtttgtatc ttaaaatgtt agaagacgag cttaacatct taagcaaaaa tgaagtagat
    12121 caaaaagaaa acaaacttga tttaaagctc aatgtcaatg cctttttaaa tagcgaactt
    12181 atcagtaaag atcgtttaag attagagctt tatagaagac ttagcaagtg taaacaagtt
    12241 catgaggttt acgagatcga aggcgaaatt gaagatcgtt ttggaaaact tgatgtttat
    12301 accaagcaat ttttatcttt gattattatt aaaattttag ctttaaataa atttaaaagc
    12361 attagtaatt atgagcaaaa cattcaattt actgctttaa gtgatgaaaa agaattcata
    12421 aaagcaaaaa gccaagacga cgatgatgtt ttagaggcta ttttaaggca tttaagaaag
    12481 gcttaaaatg gattggagta aaacttatgc agcgatttat agagcaagaa aagattattt
    12541 aaagcctgtt tttgaaatcg atcctattgc cttaaaagat ttaataggta tggaaagtca
    12601 aaaaaaagct ctttataaaa atactttgaa ttttattcaa aataaaggag caaatcatgc
    12661 tcttttatgg gggtctaagg gtactggaaa atcaagtttg attaaggcta tgtttaatga
    12721 atttaaagat caaggtttaa gacttgttga gttaaataaa gaagatttgt ttgccttagc
    12781 agatattatt gatgaaatca gattggaaaa atttaaattc atactttttt gtgatgattt
    12841 ttcttttgaa aagggagatg atagttataa atttttaaaa cctttacttg aaggaagtat
    12901 agaaaaagct ccaaacaatg taattattta tgcaagttct aatcgcaggc atttattaag
    12961 tgaaagtatt aatgataatc ttgatatgca aattagacac gcggaacttc atttaagtga
    13021 tgctgctgaa gaaagattga gcttaagtga tagatttggt ttatggttga gtttttatca
    13081 aggaaattta gatgagtatt taaaaacaat agatttttat tttaaagatt attcttatga
    13141 taaagaactt ttgcatgcta aagctaagga atttgctact ttaagagcaa gtcgaagtgg
    13201 tcgcactgca aaacaatttt atttggcttt taaggagagt tttaaatgac tggggtgcaa
    13261 atttttgtta agcttttaaa tttggattta aattattatg attttgattg gctcgaagat
    13321 caaggattaa gtgaatttga acttttaatt tctgttattt taactcaaaa tacaaattgg
    13381 aaaaatgtat taaaagcttt ggaaaattta aaaaaagaaa atatcacaag tttagaacaa
    13441 atcaatacct tatcaaattt agaacttgcg gttttgatta agcctagtgg gttttataat
    13501 actaaagcta agcgtttaaa aaatttggta gaaaatattc ttaatgttta tgaaaattta
    13561 gaaaatttta aaacaaatgt cagtagagaa tggcttttaa atattaaagg tttgggtttt
    13621 gaaagtgttg atgggatatt aaattatctt tgtaaaagag aaattttagt cgtagatagc
    13681 tatagcttgc gtttggcttt tcatttgggt tatgagtttg aaaattatga agaattaaga
    13741 gaattttttc aaagtggcat agagaatgag caagaaagtt tgtgtgaaat tttaggaaga
    13801 aaatgcgaac tttatgaact ttatcaaatt tttcatgctc tgattgtagc ttttgcaaaa
    13861 cagagtttta aaggacaaaa attaagttct aaaggtgaag aatggatcaa aattttaaag
    13921 gaagatttat gaaagcaaaa ggaagtgaac ttatacctgt tttaactata gcagggagtg
    13981 attgtagtgg tggagcaggg atacaagctg atcttaaaac ctttagtgca cacaatcttt
    14041 ttggtatgag cgtgctttta agtgtagtag ctgaaaatac cacaagagtg atttctgtgc
    14101 atgatgtgcc tactcaaagc gtggatgaac aaatgcttgc tgtgtttgaa gatatagtgc
    14161 caaaggcaac taaaattgga atgataggaa cttgtgagtt aatgagctgt gtggctaaaa
    14221 atttaagtga gtttaaacct caaaatgtag ttattgatcc tgtgatgttt gctaaaaatg
    14281 gttatgcttt aatgcctgaa gaaaattgtg attttttcaa acaaaccata gtaaaatttg
    14341 cagatattct tacacctaat atacctgaag cagagttttt gtgtggtttt aagattgcta
    14401 atgaagagca gatgataaag gcggctaagc atttacgtgg tttaggagct aaggctgttt
    14461 taattaaggg cgggcatagt gaagaaaatg ccaatgatgt gctttttgat ggcaaagaaa
    14521 tttatatttt aaaaggtgaa cgtttagaaa ctaaaaatac tcatggtaca ggttgtacgc
    14581 tttcttctgc cattgctagt aatttagcta aaggcaagga tttatttaat gcagtcagtg
    14641 aagctaaaga atatgtaaga agtgctattt attattcgct caatcttgga aaaggttgtg
    14701 gtcctacaaa tcattttttt aagtttttag atgaaaaata aattagatct tagtctttat
    14761 ctagtcgctt ctaaaggaaa taaaagcgag gaatgttttt taaattcctt agaaaacgcc
    14821 ataaaaggcg gagtaagtat agtacaactg cgtgaaaaag aacttagcgc aagcgaattt
    14881 tacaagctag gtttaaaggt gcaaaaactt tgcaaagctt ataaaatacc ttttttgatt
    14941 aatgatagaa tagatatagc tttagcttta gatgctgatg gggtccattt aggacaagag
    15001 gatttagaaa taaaactggc taggaagctc ttaggagatg aaaaaattat aggcttaagc
    15061 cttaaaaaac tagaacaact tgagttcata caaggagcaa attatctagg ttgtggggca
    15121 attagagcaa caccaactaa agaaagttcg cttttaagcc ttaagctttt agctcaaatt
    15181 tgcgataaaa gtcctatagg agttgtagct ataggaggga tcgataaaga agtgcttagt
    15241 gaattaaagg gtataaaatt aagcggcgtg gctgttgtta gagcgattat ggatgctaaa
    15301 gatgtttatt tagcggctaa agagttaaag tgtaaaatac atgaaaattt atctcttaaa
    15361 tgaaagtcct tttgaaggag ttgaaaatct tattttaaat gagattgttt tttataattt
    15421 tagcgtagat ttgagtggct atgatgcttt aatttgtact tcaaaaaatg ctttaaaagc
    15481 cttgcaaaat gcaaatattg ctttaaattt taaacttaac ttatatgttg tgggtcaaag
    15541 tacggctcaa tatgctagaa atttaggttt taaaaagatc aaaattccat caaaagctta
    15601 tggaagagat ctttttcttg aatttaaaga ggagttaaaa ataaaaaaat gtttgtattt
    15661 aagagctaaa aatatcgttt caactttaaa tttagatctt aaaaatgcag gtgtggattt
    15721 agatgaaatc attgtttatg aaaatgtttt caaaaaaagt gataaaaagc tcactcatcc
    15781 tgctattttt atatttacct ctcctttaag tgtagaaaat tttttaaaat tttatagctt
    15841 aaaagagcaa gataaagttg tggttatagg acaaagcacg gcaaagaaat ttttaaattt
    15901 taaaaatctt tttatatgtg aaaatcaaaa tcttcaagag tgtgttaaac tagctcagac
    15961 tttgatttaa ttttttaaat cccaaaaaaa ttctttagga taaatgataa tactttttgt
    16021 gagtaaaatt tcatcattga catttctatt gcgatttaag gcaatgctaa tgtgggctat
    16081 aataacgcca tctttgctta aatttgcatc agaattaaaa ttagaaaatt taaaattaat
    16141 acattgtgca ataggataaa aatattttat tttaatcaaa gcttttgcgt agttaaaatg
    16201 tatatcatct aagcattctt tattttcttg ttttgcttga tataaaaaat atttagaaaa
    16261 ttgtgttgca ttgtgactta aaatttgagc ttgaagataa taataactat cttgaattat
    16321 ttttggcgta tagccggata tgtttaaggt taagctcatc catagactta ttagcagtat
    16381 taaaaaaata gtccaaatta aaacataagc ctttttcata gcaaaatcct tttttcaaga
    16441 cagtatctca tttgtttttt taggcaaatt tttaatttat tgttttgtag actaaatgag
    16501 cttatatttt tagaaattaa tccttgttga tttaattgtt cattaaattt tggttttatt
    16561 tcatatataa gttcttcatt ttgtaatttg atgattaatt gagcttgtaa aggaataaaa
    16621 tttcccataa aatttgtgaa aataccattt tctaaaatag atattctttc aattttattc
    16681 atctttaaag cgtagataat gtgttcatta tcattatata aatcttttct attttggagt
    16741 tgggttttaa aatcagaatg gggtgaataa agcgtatgat tattttctaa aataagagta
    16801 gaattaacaa gataaagttt attatttttt aaactaatta actcatcttt taaaagacat
    16861 tttaatgtat tttgcgaaaa tgtaatattg atgcaatttt gtatcaattt ttctatttta
    16921 agtaagttta aatgtgtttg aatgataaga tt
//
LOCUS       DAPWAA010000033        16237 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.033, whole genome shotgun sequence.
ACCESSION   DAPWAA010000033 DAPWAA010000000
VERSION     DAPWAA010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16237
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.033"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..191)
                     /locus_tag="RTF91_001033"
     CDS             complement(<1..191)
                     /locus_tag="RTF91_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943923.1"
                     /translation="MSLLKNSFYILTLLSLFAFLLTWQRSAFSLFFLFPIFLTLFWEF
                     FLFLKLRKNIIKEATLIKG"
     gene            complement(172..2115)
                     /gene="ligA"
                     /locus_tag="RTF91_001034"
     CDS             complement(172..2115)
                     /gene="ligA"
                     /locus_tag="RTF91_001034"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDZ4943924.1"
                     /translation="MKKEEYLEKVALANSWMRAYYEKDEPLASDEEYDALIRELRAFE
                     EQNKDEILKDSPTQKIAPTVQSEFKKIAHLKRMWSMEDVFGESELRAWAKRAKSEKNF
                     FIEPKFDGASLNLLYENGKLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIR
                     GEVVILKDDFEKINEKRALLNQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGE
                     NTLNFSKHSEVMQFIRELGFLKDDFVKLCANLDEVLKAYEELLALREKKPMMMDGMVV
                     RVDELALCKELGYTVKFPKFMAAFKFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVN
                     LDGVIVKSATLHNFDEIARLDVKINDFVSVIRSGDVIPKITKVFKERREGLEMEISRP
                     KLCPTCQSELLDEGTLIKCQNIDCEDRLVNSIIHFVSKKCLNIDGLGENIVELLYKHK
                     KITTLESIFYLKFSDFEGLEGFKEKKINNLLNAIEQARECELFCFITALGIEHIGEVA
                     AKKLSLSFGKDWHKQSFEAYANLEGFGEQMALSLCEFTRVNHIRIDEFYKLLNLKVEK
                     LEVKSDSAIFGKTFVITGTLSRPRDEFKALIEKLGGKVNGSVSKKSDYVLFGEEAGSK
                     LSKAKELGVNCIDESTFNELIKE"
     gene            complement(2116..3258)
                     /gene="folP"
                     /locus_tag="RTF91_001035"
     CDS             complement(2116..3258)
                     /gene="folP"
                     /locus_tag="RTF91_001035"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDZ4943925.1"
                     /translation="MKFFKINPNTDFNLLCSFINPHKMGQKIMSEKTQIYFIFIKDIS
                     TPAANILKQDALRIGAELITHKEVITAKITHSNALLMASKEQIRKLIAKEKLQDFGLK
                     DLALFLQKDFLKPKKAELMAVINVNKDSFNAKSRVNENNFEKRLNDFLALKPDYIDIG
                     AVSSRPGSEYCGKEEEFKRLKKVLDLIYNKNYHEKAIFSLDSFDEYCLEYALNKGFKL
                     INDITSLRNLNLAKLASKYQAKYCLMHMQNNPSNMQDNPCYEDLLDKMTLFFKEKLEL
                     LESFGVKESILDVGIGFGKSAEHNMILIKHLEHFLQFNKPLLIGASRKSVINAYFQSE
                     IKDRLAGTLYLHLKAFENGASIIRVHDLYEHKQLFALAQAMDSIGV"
     gene            complement(3260..3859)
                     /locus_tag="RTF91_001036"
     CDS             complement(3260..3859)
                     /locus_tag="RTF91_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDZ4943926.1"
                     /translation="MFISKIIISEDFSGIKEEMINNFGIKKLRFFMPQNEFLLDDARA
                     VEKESYIAETEEKIIVLMADSYRIEAQNFLLKLLEEPPKNIKFLIVVPSKNLLLPTIK
                     SRLICEKRKVEKEVKKLDLDLKKMDLKVLFDFLQKNENLDKNELMEQIALLAKECVKY
                     KDFNAEELELFYESYELAKLNSKSGVLLATLLLNYHTKK"
     gene            complement(3865..4401)
                     /locus_tag="RTF91_001037"
     CDS             complement(3865..4401)
                     /locus_tag="RTF91_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HobA family DNA replication regulator"
                     /protein_id="HDZ4943927.1"
                     /translation="MSDFLSFTLENIRNGGAFMAWLESRRLEWAPLMAARLKYLLEGR
                     TFVLMCDEQRTWYEEYFLKNINAKAARPMLPFVSLNSLCKKKVQSSEDIALLNDLLDI
                     SFPNGYVYFYIGSASDNKSLIAKSRDDSLLWLFDEQLQDSFYLNSKDKDLDIKLISLY
                     QLFDVSLDAILFSKVQLG"
     gene            complement(4402..5604)
                     /locus_tag="RTF91_001038"
     CDS             complement(4402..5604)
                     /locus_tag="RTF91_001038"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HDZ4943928.1"
                     /translation="MLIVQKYGGTSVGTLDRIEAVANRVIQSVKQGNQVVVVVSAMSG
                     VTNTLIEQAEYFSKTPNGKDMDMLLSSGERVSSALLSIALNEKGYSAISFSGRKAGII
                     TDSVFTKARIHHIDTKAIKSELQNGKIVVIAGFQGVDGEGNVTTLGRGGSDLSAVAVA
                     GALNVDLCEIYTDVDGVYTTDPRIEPKAKKLNKISYEEMLELASLGAKVLQNRSVELA
                     KKLNVNLVTRSSFNNNEGTMITKEDGMEQALVSGIALDKNQARVTLRNVDDKPGIAAE
                     IFSVLANENINVDMIIQNVGVDGATNLGFTVPENELDLAKNAMQKILSSKTTIESDSA
                     VVKVSIVGVGMKSHSGVASKAFKALADEGINIGMISTSEIKISMIVHEKYGELAVRAL
                     HECYGLDK"
     gene            complement(5606..6076)
                     /locus_tag="RTF91_001039"
     CDS             complement(5606..6076)
                     /locus_tag="RTF91_001039"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDZ4943929.1"
                     /translation="MENEKNYRPNVAAIILSSSYPFECKIFIAKRSDMDNVWQFPQGG
                     IDKGESVKHALFRELKEEIGTDEVEIIAEYPQWLSYDFPTKIVKKMYPYDGQIQKYFL
                     VRLKHGVTININTKHPEFDDYQFVSVKQIFEMINHFKKSIYVKVIKYFEEKGYI"
     gene            6176..7243
                     /locus_tag="RTF91_001040"
     CDS             6176..7243
                     /locus_tag="RTF91_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HDZ4943930.1"
                     /translation="MYFYIHIPFCESKCHYCAFTSLKKNDYEKAYFKALKEDIAFQLK
                     QFNIQSNQIKTLFIGGGTPSCVDVYNYEDIFEILGPLLDKNVEISCEANPNSATLNWL
                     KTMKNLGVNRISFGAQSFHPKKLQFLGRIHNQEMIIKTLENANKVGFKNINIDLIYDT
                     KLDSKKMLEFELLHLKKIKTLITHLSAYNLTIESNTAFAKKEHLKKNAPNLMKFFIKQ
                     LLELGFFQYEISNFSKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLND
                     YIKNPTFRTIEELSSKDLNLEHLFLGLRSIIGIDEARLNQWQKEKIDILLKEKKLFYK
                     SKRYFNPNFLISDELALYLSS"
     gene            7302..7709
                     /gene="tatB"
                     /locus_tag="RTF91_001041"
     CDS             7302..7709
                     /gene="tatB"
                     /locus_tag="RTF91_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HDZ4943931.1"
                     /translation="MSFGEIIVILVVAILVLGPDKLPEAIVQIAKILKAVKRNIDDAK
                     SSIEKEIRINDLKEEAKKYKDEFSNTNENIRKKLSFEEFDDLKRDILDKTKVDLTFDS
                     RDDSVKNNLSGPNLNTEEKPNLSKLETQDKTEK"
     gene            7710..8447
                     /gene="tatC"
                     /locus_tag="RTF91_001042"
     CDS             7710..8447
                     /gene="tatC"
                     /locus_tag="RTF91_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDZ4943932.1"
                     /translation="MFEELRPHLIELRKRLFISVACIVVMFIVCFALRSYILDILKAP
                     LIAVLPEVAKHVNVIEVQEALFTAMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKR
                     LVVPFVSFASIMFALGACFCYFIVVPLAFKFLINFGLNEDFNPIITIGTYVDFFTKVV
                     VAFGLAFEMPVIAFFFAKIGLIDDNFLKRHFRIAILVIFVFSAFMTPPDVLSQFLMAG
                     PLCGLYGLSILIVQKVNPAPKDEESNE"
     gene            8440..9468
                     /gene="queA"
                     /locus_tag="RTF91_001043"
     CDS             8440..9468
                     /gene="queA"
                     /locus_tag="RTF91_001043"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDZ4943933.1"
                     /translation="MNKDLLLSNYDYTLPNKLIANYPANPKEDARLLVFNRKNKQIFH
                     TTFKNLQDFLPNCAIFFNDTKVIKARIYGNKASGGKIELFLHQPFLNSKSPLFLVQIK
                     GRVKKDEILHFKQNLKAQIVELLDDGLRKVQFFQNDKILDTSNLYNLLDKIGHIPLPP
                     YIKREDEKSDLKDYQSIFAKNLGAVAAPTASLHFSKTMLENLRKKHEIYHLTLHVGAG
                     TFKSIECENIQEHKMHSEFFNIPQQACEIIDSKQAILGVGTTVTRTIEYYARTKTKSG
                     FCDLFLYPQNQPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYS
                     YGDAMLIL"
     gene            complement(9457..10422)
                     /gene="lpxD"
                     /locus_tag="RTF91_001044"
     CDS             complement(9457..10422)
                     /gene="lpxD"
                     /locus_tag="RTF91_001044"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDZ4943934.1"
                     /translation="MKLSEIAEFLSLEYKGEDIEISALNSLLKANFTELTYCDGEKNT
                     KDIPHTGAAAILVSKEYENLVPKDTKVLITQSPHLCFAFLSKLFAKPLMSTAKEKVQN
                     IAKSARIMPNVYIGENVNIGENVIIMAGAYIGDNVSIGDESIIHPNVVIYNDTKIGKK
                     CHLLANCVIGSDGFGYAHNKNGEHYKIYHNGNVILEDFVEVGACTTIDRAVFDSTIIK
                     AGTKVDNLVQIGHNCNIGQNCIIVAQTGISGSSELGRNVVMGGQSATSGHLKIGDFST
                     IAARGGVSKNLEGGRVYGGFPIMLQKDWLKLQAKIAMNFKEKSQD"
     gene            complement(10419..10883)
                     /gene="ilvN"
                     /locus_tag="RTF91_001045"
     CDS             complement(10419..10883)
                     /gene="ilvN"
                     /locus_tag="RTF91_001045"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDZ4943935.1"
                     /translation="MRRVLSVIVLNEHGVLSRIVGLFSGRGYNIDSLTVAPLENKEFS
                     RINIVTSGNERTFEQIVKQLHKLIPTYKVIESEEFIDKEMALVKVPLNENLGGLDAVL
                     KAYNGTIANSNENFLFLMVADDANRIDNFLKTIKKYNPSDIVRSGSVLMEIK"
     gene            complement(10883..12580)
                     /locus_tag="RTF91_001046"
     CDS             complement(10883..12580)
                     /locus_tag="RTF91_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HDZ4943936.1"
                     /translation="MKELSGSVMICEALKEENVKIVFGYPGGAALNIYDEIYNQKYFK
                     HILVRHEQAALHAADAYARMSGEVGVAIVTSGPGFTNTITGLATAYSDSIPLVLISGQ
                     VANSLIGTDAFQEIDAVGISRPCVKHNYLVTCIEEFPRILKEAFYIARSGRPGPVHID
                     VPKDVSATLGLWEYPKEISMKTYKPVYKGNSKQIKKFAELLKEAKRPLFYLGGGCVSS
                     NASEQIRELVKFTKIPAVETLMALGILRSDDVFNLKMAGMHGSYVANMALSECDLLVS
                     IGARFDDRITGKTSEFAKHATIVHIDIDPSSISKIINAHYPIVGDIKEVLKEFLEELK
                     KENFNTTFNEWHETLKRYNELYPLSYEDSNEVLKPQWVIKECAKMAPDARIITDVGQH
                     QMWVAQFYPFNYPRQLATSGGQGTMGYSLPAALGAKLAVGEEVVINFVGDGSVLMNIQ
                     ELMTAHEYGIKTINIILNNAFLGMVRQWQSMFYKEHFSQTDLSIQPDFIKIAQGFGCE
                     GYEISSKEEFIQAFNQALKSDKTSLLNVMIDRFEDVLPMVPAGGAIYNMILPKAKDK"
     gene            complement(12599..13042)
                     /locus_tag="RTF91_001047"
     CDS             complement(12599..13042)
                     /locus_tag="RTF91_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HDZ4943937.1"
                     /translation="MTLKEQILSDIKEAMKQKDDFKRDSLRTLNAAFKQIEVDERIEL
                     DNERIYKIIASEIKKRKDAIELYLKANREDLAQKEQNEISLFEIYLPKQLSDEELTLV
                     LKQLIEELGVSSLKEQGLVMKEAKAKLGVSVDGKRLNLALKELLK"
     gene            complement(13060..14076)
                     /locus_tag="RTF91_001048"
     CDS             complement(13060..14076)
                     /locus_tag="RTF91_001048"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3,4-dihydroxy-2-butanone
                     4-phosphate synthase/GTP cyclohydrolase II"
                     /protein_id="HDZ4943938.1"
                     /translation="MKFVSVEQAIKDLQAGKMLVMVDAEDRENEGDLIFPAQFSTQEK
                     INFMIKEARGVVCVALDEALAKKFELPLMVPKNTSNHETAFTITVDAKDATTGVSAYE
                     RNMTIQIFTDDNAKASDFVRPGHINPLIAKKGGVLERTGHTEGTVDLCKLAGLKGACV
                     ICEIVKDNGDMARREDLEIFCQKHDLNMIAVSDLIEYRLKHESLIKLEEKSQSILAGF
                     KAEKFIFSDHNQIQHIAFCFKDIKKCENVKFHISGSDFELLTSDKFSKLLEQIKFLSE
                     NGGVIVFMQGEKSSVTQYRNYGIGAQILRYFGIEEIKLLSQSCDKDYIGLEGFGLNLK
                     ACKF"
     gene            14164..14238
                     /locus_tag="RTF91_001049"
     tRNA            14164..14238
                     /locus_tag="RTF91_001049"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14196..14198,aa:Gln,seq:ttg)
     gene            14273..14348
                     /locus_tag="RTF91_001050"
     tRNA            14273..14348
                     /locus_tag="RTF91_001050"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14306..14308,aa:Met,seq:cat)
     gene            complement(14557..14709)
                     /locus_tag="RTF91_001051"
     CDS             complement(14557..14709)
                     /locus_tag="RTF91_001051"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943939.1"
                     /translation="MKNNEFEFDFHDVKFILRYIKLKKLQKRNGIFNNRKISNNKTIS
                     KMHKMW"
     gene            complement(14796..16172)
                     /locus_tag="RTF91_001052"
     CDS             complement(14796..16172)
                     /locus_tag="RTF91_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDZ4943940.1"
                     /translation="MQQEYYDLDLERAILSSCILSEEAYASIAGEIGPKDFSLKAHQD
                     IFKAIMACSKQGAPISLSFLRKYEKIDEQIITEILATPSMIDLPAYVNELREKSIKRQ
                     LLSFAHLLPTRINENRAVSEIADEISKEIFNITNRVNSKDIKDIKIVLSELFGEFTKQ
                     KTLENRSIIGLDTGFEGLNKMTKGFKAGELIIIAARPGMGKTTLCLNFIDKALRQDKG
                     VALFSLEMPATQIMQRMLSSKTSIPLQKILTADLNDDEWGRLGDACNDYSQKKLYIYD
                     SGYATIADVRAILRRLKSQDESIGLCVIDYIGLMMSNSNFNDRHLQVSEISRGLKLLA
                     RELDMPIIALSQLNRGLEQRANKRPLMSDLRESGAIEQDADAILFVYRDEVYREQEEK
                     EKENKAKAEGKAYQRFFIPNPMQENAEIIVGKNRNGPVGTIEVIFLKEKSCFVDKPIG
                     YEATEFTG"
BASE COUNT         5401 a         3008 c         2011 g         5817 t
ORIGIN      
        1 cttcctttaa ttaaagtggc ttctttgata atattttttc taagttttaa aaataaaaaa
       61 aattcccaaa aaagtgttaa aaaaatagga aataaaaaaa acaaagaaaa agcactcctt
      121 tgccaagtca acaaaaaagc aaaaagactc aacagtgtta aaatataaaa actattcttt
      181 aataagctca ttaaaagtgc tttcatctat gcaatttaca cctagctctt tagctttgct
      241 aagtttagag cctgcttctt ctccaaaaag tacataatca ctttttttag aaaccgaacc
      301 gtttacctta cccccaagct tttctatcaa agctttaaat tcatctcttg ggcgagaaag
      361 cgtacctgtg ataacaaaag ttttaccaaa aatcgcacta tcacttttta cttcaagttt
      421 ctctactttt aaatttaaaa gcttataaaa ttcatcaatt cttatatgat taacacgcgt
      481 aaattcacaa aggctcaaag ccatttgctc tccaaagcct tctaaatttg cataagcttc
      541 aaagctttgt ttgtgccagt ctttgccaaa actcaagctt aattttttcg ctgcaacttc
      601 gccaatatgt tctatcccta aagctgtaat aaaacaaaaa agctcacatt ctcttgcttg
      661 ttctatagca tttaaaagat tgttaatttt cttttcttta aagccttcca aaccttcaaa
      721 atcactaaat tttaaataaa aaatgctttc aagtgtagtg atttttttgt gtttatataa
      781 aagctctact atgttttctc caagtccgtc tatattaaga cattttttag aaacaaaatg
      841 aatgatagaa tttacaagcc tatcttcaca atctatattt tgacatttta ttaaagttcc
      901 ttcatctaaa agctcacttt gacaagtagg acaaagttta gggcgtgaaa tttccatttc
      961 taagccttct ctacgttctt taaaaacctt agtgatttta ggtataacat cgccacttct
     1021 tatcacactt acaaaatcat tgattttaac atcaagtctt gcaatttcat caaaattatg
     1081 aagcgtagct gactttacta taactccatc taaatttaca ggttctaaaa ccgccacagg
     1141 agtaatcacc ccacttcttc ctacttgtaa atttacccct attaagcgtg tagttttttc
     1201 aagagcagga aatttaaaag cagccataaa ttttggaaat tttaccgtat aacctagctc
     1261 tttacaaagt gcaagttcat caactcttac aaccattcca tccatcatca taggcttttt
     1321 ttcccttaaa gctaaaagct cttcataagc ttttaaaact tcatctaaat tagcacaaag
     1381 cttaacaaaa tcatctttta aaaaaccaag ctctctaata aattgcatca cctcgctatg
     1441 tttgctaaaa tttaaagtat tctctcctac cccccaagga taaaatttca aatttctttc
     1501 tttagtaata cttgtatcaa gttgtcttaa acttccactt gcagcattgc gcgggttagc
     1561 aaataagctt tgatttaaaa gggctctttt ttcattgatt ttttcaaaat catcttttaa
     1621 aatcactact tcaccacgaa tttctatcct ttctttgtaa gcgatatttt taggaatatt
     1681 ttctatttca aaaacattaa gcgttatatc ctcacccact tcaccatcac ctctagttgc
     1741 accacttact aacttaccat tttcataaag taaatttaaa ctcgctccgt caaatttagg
     1801 ttctataaaa aagttttttt cactttttgc acgttttgcc caagctctaa gttcactctc
     1861 accaaaaaca tcttccatcg accacatacg ctttaaatga gctatttttt taaattcgct
     1921 ttgtacagta ggagctattt tttgcgttgg agaatctttt aaaatctcat ctttattttg
     1981 ctcttcaaaa gcccttaatt ctctgatcaa agcatcgtat tcttcatcac tagctaaggg
     2041 ttcatctttt tcataatacg ccctcatcca agaatttgct aaagcaactt tttctaaata
     2101 ttcttctttt ttcatctaaa ctcctatact atccattgct tgcgctaaag caaaaagctg
     2161 tttatgttca tataaatcat gcactcttat aatactagct ccgttttcaa aagcctttaa
     2221 atgtaaatac aaagtccccg ctaaacgatc tttaatctcg ctttgaaaat acgcattaat
     2281 cacactttta cgacttgcac ctataagtaa aggtttgtta aattgtaaaa aatgttctaa
     2341 atgtttgatt aaaatcatat tatgctccgc actcttacca aagcctatac ctacatctaa
     2401 aatactttct tttactccaa aactttctaa aagttcaagc ttttctttaa aaaacaaagt
     2461 cattttatca agcaaatctt cataacaagg attatcttgc atattgcttg gattgttttg
     2521 catgtgcatt aaacaatact ttgcctgata tttacttgcg agtttggcta aattaagatt
     2581 tcttaaactt gtaatgtcat tgataagttt aaagccctta tttaaggcat attctaagca
     2641 atattcatca aaactatcta aactaaaaat cgctttttca tggtagtttt tgttataaat
     2701 taaatcaagt acttttttga gtcttttaaa ttcctcttcc ttgccacaat actcactccc
     2761 aggccttgag cttaccgctc ctatatctat ataatcgggc tttaaagcaa gaaagtcatt
     2821 aagtcttttt tcaaaattat tttcatttac gcgacttttt gcattaaaac tatctttatt
     2881 gacattaatc accgccataa gctcagcttt ttttggtttt aaaaaatctt tttgcaaaaa
     2941 aagagctaaa tccttaagtc caaaatcttg aagcttttct ttagcaataa gctttcgaat
     3001 ttgttctttg cttgccatca aaagagcatt tgaatgagtg atttttgcag taattacctc
     3061 tttatgagta atgagttcag cccctattct taaagcatct tgttttaaaa tatttgccgc
     3121 aggagtagaa atatctttga taaaaataaa atagatttga gttttttcac tcatgatttt
     3181 ttgtcccatt ttatgagggt ttataaaaga acaaagcaaa ttaaaatcgg tgtttggatt
     3241 gattttaaaa aatttcattt tatttctttg tatgatagtt taacaaaagc gttgccaaaa
     3301 gtactccgct tttagaattt aattttgcaa gttcataact ttcatagaaa agttctaatt
     3361 cttcagcatt aaaatcttta tatttcacac attctttagc aagcaatgca atttgctcca
     3421 taagttcatt tttatccaaa ttttcatttt tttgtaaaaa atcaaaaagt acttttaaat
     3481 ccattttttt aagatctaaa tcaagttttt taacttcctt ttcaactttt cttttttcac
     3541 aaataaggcg tgattttata gtgggtaaaa gtaaattttt agaaggcact acaataagaa
     3601 atttaatatt ttttggaggt tcttcaagaa gcttgagtaa aaaattttgc gcttcaatcc
     3661 tataagaatc tgccattaac acaataattt tttcttcggt ttctgcgata taactttctt
     3721 tttcaactgc tcttgcatca tcaagtaaaa attcattttg aggcataaaa aatcttaatt
     3781 tttttatacc aaaattatta atcatttctt ctttaatacc tgaaaaatcc tcactgataa
     3841 taatcttact aataaacaaa atatttatcc taattgcacc ttagaaaata aaattgcatc
     3901 caaacttaca tcaaaaagtt gatataagct aataagctta atatccaagt ctttatcttt
     3961 agaattcaaa taaaagctat cttgcaactg ctcatcaaaa agccataata aactatcgtc
     4021 tcttgattta gcaatcaaag atttattatc cgaagcactc cctatataaa aatacacata
     4081 gccattagga aaagaaatat caagtaaatc attaagtaaa gctatatcct ctgaactttg
     4141 cacttttttc ttacataaag aatttaaaga cacaaaagga agcataggac gagcagcttt
     4201 tgcatttata ttttttaaaa aatactcttc ataccaagtt ctttgttcat cacacattaa
     4261 aacaaaggtg cggccttcta aaagatattt aagtcttgca gccatcaaag gagcccattc
     4321 caaacgacgc gattctagcc atgccataaa agctccgcca ttacgaatat tttcaagagt
     4381 aaagcttaaa aaatcactca tttatttatc aagtccataa cactcatgca gtgccctaac
     4441 tgctaactcg ccgtattttt catgaacgat catagaaatt ttgatttcac tagtagaaat
     4501 cataccgata ttaataccct catcagctaa agctttaaaa gctttacttg ccacacctga
     4561 atgcgatttc atacctacgc ccactataga aacttttact acagcactat cactttctat
     4621 agttgttttt gagcttaaaa ttttttgcat agcattttta gccaaatcaa gctcattttc
     4681 aggaactgta aagcctaaat ttgtagcacc atcaactcca acattttgta taatcatatc
     4741 tacattaata ttttcatttg ccaaaacaga aaaaatttca gctgcaattc cgggtttatc
     4801 gtctacattt cttaaagtca ctcttgcttg atttttatcc aaagcaatac cgcttactaa
     4861 agcttgttcc attccgtctt cctttgttat cattgttcct tcgttattgt taaaactact
     4921 tctagttact aagttaacat ttaatttttt tgcaagctct acagagcgat tttgcaaaac
     4981 ttttgcacct aaacttgcaa gttcaagcat ttcttcataa gaaattttat ttaatttttt
     5041 tgccttcggt tcaatccttg gatctgttgt ataaacccca tcaacatcgg tataaatttc
     5101 gcacaaatct acatttaaag cacctgctac tgccacggca cttaagtcgc ttccaccacg
     5161 ccccaaagtt gttacattgc cttccccatc tacaccttga aaacctgcta taacaactat
     5221 tttaccattt tgaagttctg attttattgc cttagtatcg atatgatgaa ttcttgcttt
     5281 tgtaaatacg ctatctgtaa taatacctgc ttttctccca gaaaatgata tagcagaata
     5341 acccttttca tttaaagcaa tggaaagcaa agcactactt acacgctctc cactacttaa
     5401 aagcatatcc atgtccttgc cattaggagt tttactaaag tattcagctt gctcaataag
     5461 agtatttgtt accccactca ttgcagatac tacaacaaca acttgattac cctgttttac
     5521 actttggata actctattag ctactgcttc gatacggtca agtgttccaa cgcttgttcc
     5581 accatatttt tgaactataa gcattttaga tataaccttt ctcttcaaaa tatttaatta
     5641 ctttaacata aatacttttt ttgaaatgat taatcatttc aaaaatttgt ttaacactta
     5701 caaattgata atcatcaaat tcaggatgct tggtattgat attaattgta acaccatgtt
     5761 ttaaacgcac taaaaaatat ttttgaatct gcccatcata aggatacatt tttttaacaa
     5821 ttttggtggg aaaatcataa cttaaccatt gtggatactc agcaatgatt tcaacctcat
     5881 cagtacctat ttcttctttt aattctctaa ataaagcatg cttgacgctt tcacccttat
     5941 caatgcctcc ttgtggaaat tgccaaacat tatccatatc acttcttttg gcgataaaaa
     6001 tcttacactc aaaaggataa gaacttgaca aaataatagc tgcaacattt ggtctataat
     6061 ttttctcgtt ttccacaata tttttcctta atttcaagga tacaatttta acctaaatca
     6121 aatcaaattt ttattaaaat acattaaaat ttaataaaat attcttaggg cttttatgta
     6181 tttttacatc catattccat tttgtgaaag taaatgtcat tattgcgctt ttacaagttt
     6241 gaaaaaaaat gattatgaaa aagcttattt caaagcttta aaagaagata ttgcttttca
     6301 attaaaacaa tttaacatcc agtcaaatca gattaaaacc ttgtttatag gcggaggaac
     6361 gccaagttgt gttgatgtgt ataattatga agatattttt gaaattttag gtcctttatt
     6421 ggataaaaat gtagaaattt catgcgaagc taatcccaac tcagccactt taaattggct
     6481 taaaactatg aaaaatttag gagttaatcg tatttctttt ggagctcaaa gctttcatcc
     6541 taaaaaactt caatttcttg gaagaattca caatcaagaa atgattatta aaaccttaga
     6601 gaatgcaaac aaagtgggtt ttaaaaatat caacatagat ttaatttatg atactaaatt
     6661 agatagtaaa aaaatgcttg aatttgaact tttgcattta aaaaaaatca aaactttaat
     6721 cacacatctt agcgcttata atttaactat agaatcaaac acagcctttg ccaaaaaaga
     6781 acatttaaaa aaaaatgctc ctaatttaat gaaatttttt ataaaacaac tcttagagct
     6841 tggttttttt caatatgaaa tcagtaattt ttcaaaaacc aaagcccaaa tttgcaaaca
     6901 taatcttgct tattggcaag gaaaaaacta cctagcttgt ggactaagtg cagtaggatt
     6961 ttatgaaaat aaacgttttt atacggcaaa aaatttaaac gattatataa aaaatcccac
     7021 ttttagaact atagaggaat taagctctaa agacttgaat ttggaacact tatttttagg
     7081 acttagaagt ataataggca ttgatgaagc aaggcttaat caatggcaaa aagaaaaaat
     7141 tgatatatta ttaaaagaaa aaaaactttt ttacaaaagt aaaagatatt ttaatcctaa
     7201 ttttctcatt agcgatgaac ttgctttata tctctcatct taaatttaag ttttttaagt
     7261 aaaatattta tttaaaatat aaaatcaaag agtactgatt aatgagtttt ggtgaaatta
     7321 tagttatttt agttgtagct attttagttt tggggcctga caagcttcca gaagctatag
     7381 tgcaaatagc aaaaattcta aaagcagtaa aacgcaatat agatgatgca aaatcgagca
     7441 tagaaaagga aatacgcatc aatgatttaa aagaagaagc taaaaaatac aaagatgaat
     7501 tttcaaatac caatgaaaat atacgtaaaa aactcagttt tgaagaattt gatgatctta
     7561 aaagagatat tttagataaa acaaaagtag atttaacctt tgatagtaga gatgatagtg
     7621 taaaaaataa ccttagcgga ccaaatttaa atacagaaga aaaaccaaat cttagcaaat
     7681 tagaaacaca agataaaacg gaaaaataaa tgtttgaaga attaagacct catttaatag
     7741 aacttagaaa acgacttttt ataagcgttg cttgtattgt agttatgttt attgtatgtt
     7801 ttgccctacg aagttatatc ttagatattt taaaagctcc acttatagct gttttacctg
     7861 aagtagctaa acatgtgaat gtaattgaag ttcaagaagc tttatttact gcaatgaagg
     7921 ttagtttttt tgcagctttt atcttttctt tacctgtaat cttttggcag ttttggaaat
     7981 ttgtagctcc aggactttat gataatgaaa aacgccttgt cgtgcctttt gttagctttg
     8041 caagcattat gtttgcttta ggggcttgtt tttgttattt tattgtagtg cctttggctt
     8101 ttaaattttt gattaatttt ggtttaaatg aagattttaa tcctattatt actataggaa
     8161 cttatgtaga ttttttcacc aaagttgttg tagcttttgg cttggctttt gaaatgcctg
     8221 taattgcctt tttctttgct aaaattggac ttatagatga taatttttta aaacgccatt
     8281 ttcgtatagc tattttagtt atttttgttt tttcagcctt tatgactccg cctgatgttt
     8341 tatctcaatt tttaatggca gggccacttt gcggacttta tgggctttct attttaattg
     8401 ttcaaaaggt aaaccctgct ccaaaagacg aagaaagcaa tgaataaaga tttgcttctt
     8461 tcaaactatg attacaccct acctaataaa ctcatagcta attatcccgc aaatccaaaa
     8521 gaagatgcta gacttttagt ttttaatcgc aaaaacaaac aaatttttca tactactttt
     8581 aaaaatttac aagatttttt acccaactgt gcaatttttt ttaatgatac taaagttatc
     8641 aaagcaagaa tttatggcaa taaagcaagt ggaggaaaga tagagctttt tttgcatcaa
     8701 ccttttttaa attctaaaag ccctcttttc ctagtgcaaa ttaaaggacg tgtcaaaaaa
     8761 gatgaaattt tacattttaa gcagaattta aaagcacaaa ttgtagaact tttagatgat
     8821 ggtcttcgca aagttcagtt tttccaaaat gataaaattt tagatacttc aaatctttat
     8881 aacctacttg ataagatagg acatataccc ttacctcctt atatcaaaag agaagatgaa
     8941 aaaagcgact taaaagacta tcaaagtatc tttgcaaaaa atttaggagc agtagctgct
     9001 ccaactgcaa gcttacattt tagcaaaact atgcttgaaa atttaagaaa aaaacatgaa
     9061 atttatcatt taaccttaca tgtaggagct ggaactttta aaagcataga atgtgaaaat
     9121 atacaagaac acaaaatgca tagtgaattt tttaatattc cacagcaagc atgtgaaatt
     9181 atagattcca aacaagccat tttaggcgtg ggtacaaccg taacaagaac catagaatat
     9241 tatgcaagaa ccaaaacaaa aagcggtttt tgtgatcttt ttttataccc acaaaatcaa
     9301 cctataagac aaaatcatct tttaactaat tttcatttac caaaatctac tcttattatg
     9361 ctagtttcag cttttattgg cagagagcaa tgcttaaaac tttacgaact tgcaataaaa
     9421 gaaaaatatc gcttttactc ttatggcgat gcgatgttaa tcttgtgatt tttctttaaa
     9481 attcatcgct attttagctt gaagttttag ccaatctttt tgaagcatga taggaaaacc
     9541 accgtaaaca cgcccacctt ctaaattctt actcacgccg cctcttgcag ctatagtgct
     9601 aaaatcacct atttttaaat gtccgcttgt tgcactttgt ccgcccataa caacattgcg
     9661 ccctagttca cttgaacctg aaattccagt ttgtgccaca ataatacaat tttgacctat
     9721 attacaatta tgtccgattt gaaccagatt atctacctta gtgcctgctt tgataatggt
     9781 gctatcaaaa accgctcgat ctatagttgt acaagcccct acttctacaa agtcttctaa
     9841 aatcacatta ccattatgat aaattttata atgctcgccg tttttattgt gtgcataacc
     9901 aaagccatca cttcctataa cacaatttgc aagcaaatga cattttttac cgattttagt
     9961 atcattataa ataaccacat taggatggat aatactctca tcgccaatgc taacattatc
    10021 acctatataa gctcctgcca taatgattac attttcacct atattaacat tttcacctat
    10081 atagacattg ggcataattc ttgcactttt tgcaatattt tgcacttttt ccttagctgt
    10141 gctcatcaaa ggtttagcaa aaagtttact taaaaaagca aaacataaat gcggactttg
    10201 ggtaattaaa accttagtat ctttaggtac taaattttca tattctttag ataccaaaat
    10261 agcagctgcc cctgtatgag gtatatcttt agtatttttc tcaccatcac agtaggtaag
    10321 ttctgtaaaa tttgctttta ataaagaatt taaagcactg atttctatat cttcaccctt
    10381 atattctaaa cttaaaaatt ctgctatttc acttaacttc atttaatctc catcaaaaca
    10441 gatccgctac gaactatatc gctaggatta tactttttaa ttgtttttaa aaaattatca
    10501 atgcgatttg catcatcagc aaccattaaa aataaaaaat tttcattgct atttgcaata
    10561 gtaccattat aagctttcaa aacggcatca agtccaccta aattttcatt taagggaact
    10621 tttaccaacg ccatctcttt atcaataaat tcttcacttt ctatcacttt ataagtaggg
    10681 ataagcttat gaagctgctt aactatctgc tcaaaagttc tttcattccc tgaagttact
    10741 atattaatac gcgaaaattc tttattttcc aaaggtgcta cagtaagtga gtcaatatta
    10801 taccctcttc ctgaaaaaag tcctactata cgcgataaaa ccccatgttc atttaaaaca
    10861 attactgata aaacccttct cattatttat cctttgcctt tggtaaaatc atattataaa
    10921 tcgcgcctcc tgcaggcacc ataggtaaaa catcttcaaa gcgatctatc ataacattta
    10981 aaagagaagt tttatcactt tttaaagctt gattaaaggc ttggataaat tcctctttac
    11041 ttgaaatttc ataaccttcg caaccaaaac cttgagcaat tttgataaaa tcaggctgaa
    11101 tacttaaatc tgtttgtgaa aaatgctctt tataaaacat actttgccac tgccttacca
    11161 tacctaaaaa ggcattattt aaaataatat ttatagtttt tataccgtat tcatgagcag
    11221 tcataagctc ttggatattc attaaaactg atccatcacc tacgaaatta atcaccactt
    11281 cttcgcccac ggcaagcttt gcacctaaag ccgcaggtaa agaatacccc atagttcctt
    11341 gcccaccact tgttgcaagt tgccttggat agttaaaagg ataaaactgt gctacccaca
    11401 tttgatgctg acccacatca gtaataatcc ttgcatctgg agccattttt gcacactctt
    11461 taattaccca ttgtggcttt aaaacttcat tactatcttc ataagaaagc ggataaagtt
    11521 cattataacg ctttaaagtt tcgtgccatt cgttaaaagt agtattgaaa ttttcctttt
    11581 taagttcttc taaaaactct ttaagaactt ctttaatatc ccctactata ggataatgtg
    11641 cattaataat ctttgaaata gagcttggat caatatcaat atgaactata gtcgcatgtt
    11701 tagcaaattc gcttgttttt cctgtaattc tatcatcaaa ccttgctcct atactcacaa
    11761 gtaaatcaca ctcactcaaa gccatattgg ctacataact tccatgcatg cctgccattt
    11821 taagattaaa aacatcatca cttcttaaaa ttccaagtgc cattaaagtt tcaactgctg
    11881 gaatttttgt aaattttaca agctctctga tttgttcact tgcattggag ctaacacaac
    11941 caccgcctaa ataaaacaaa ggtctttttg cttcttttaa aagctctgca aattttttaa
    12001 tttgctttga atttccttta taaacaggct tataggtttt catagaaatt tctttaggat
    12061 attcccaaag tcctaaagtt gcacttacat cttttggcac atctatatgc acaggtccag
    12121 gtctaccgct tcttgctata taaaaagctt cttttaaaat gcgtggaaat tcttctatgc
    12181 aagttactaa ataattatgc ttcacacaag gtcttgaaat gcctactgca tcaatttctt
    12241 gaaaagcatc agtaccaatg agagaatttg ccacctgccc tgaaatcaat accaaaggaa
    12301 tagaatcgct ataagcggta gctaaacctg taatggtatt tgtaaaacct gggccacttg
    12361 taactatagc tacgcctact tctccactca tccttgcgta agcatcagca gcatgcaaag
    12421 ccgcttgttc atgacgcact aaaatatgtt taaaatactt ttgattgtaa atttcatcat
    12481 aaatatttag cgcagcaccg ccaggataac caaaaacaat tttaacattt tcttctttta
    12541 aagcttcaca aatcattaca gaaccgctta actctttcat aataacactc caaaaaattt
    12601 attttaaaag ctctttaagt gctaaattaa gccttttgcc atcaacactt acacctaatt
    12661 tcgctttagc ttctttcatt accaagcctt gctcttttaa tgaacttaca cctaattctt
    12721 ctataagctg ttttaaaact aaagttaatt cttcatcact tagttgctta ggcagataaa
    12781 tttcaaaaag gcttatttca ttttgttctt tttgtgctaa atcttcacga tttgccttaa
    12841 gataaagttc gattgcatct ttgcgttttt taatttcact tgcaatgatt ttataaattc
    12901 tttcattgtc taactctatt ctttcatcaa cttctatttg cttaaaagct gcatttaggg
    12961 ttcttaaact gtctctttta aaatcatcct tttgtttcat tgcttctttg atatcactta
    13021 aaatttgttc ttttaaagtc atttttttcc tttttttagt taaaatttac aagccttaag
    13081 atttaaacca aaaccttcta agcctatata atctttatca caactttgag ataaaagttt
    13141 gatttcttct ataccaaaat atcttaaaat ttgcgctcct atgccataat ttctatattg
    13201 agttacactt gatttttctc cttgcataaa aactataaca ccgccatttt cacttagaaa
    13261 tttaatttgt tctaaaagct ttgaaaattt atctgaagtt aaaagttcaa aatcactacc
    13321 actgatatga aatttaacat tttcacattt ttttatatct ttaaagcaaa aagcaatgtg
    13381 ttggatttga ttatgatcac taaagataaa tttttctgct ttaaaacccg ctaaaatgct
    13441 ttggcttttt tcctcaagct taataaggct ttcatgtttt aaacgatatt ctataagatc
    13501 actcacagct atcatgttta aatcatgttt ttggcaaaaa atttctagat cttctcttct
    13561 tgccatatct ccattatctt ttacaatttc acaaatcaca caagcacctt ttaatcctgc
    13621 taatttacaa agatcaaccg taccttctgt gtgacctgtg cgttctaaaa ctccaccttt
    13681 ttttgcaatt aaaggattga tatgtcctgg tcttacaaaa tcgcttgcct tagcattatc
    13741 gtcagtaaaa atttgtatag tcatatttct ttcataggca ctaactccag ttgtagcgtc
    13801 ttttgcatct acagttatag taaaggcggt ttcgtgattt gaagtgtttt taggcaccat
    13861 caaaggaagt tcaaattttt ttgctaaagc ctcatctaag gccacacaaa ccacaccacg
    13921 tgcttctttg atcataaaat ttattttttc ttgagtgcta aattgcgcag gaaagatcaa
    13981 gtcaccttca ttttccctat cttctgcatc taccataaca agcatttttc ctgcttgcaa
    14041 atctttaatt gcttgttcta cactaacaaa tttcattttt atttccttaa aatttctaaa
    14101 attataactt aaattgcttg acaaataaat taaaattcat tataatcaga cttttaaaaa
    14161 tattggggta tcgccaagcg gtaaggcaac aggttttggt cctgtcattc aggggttcga
    14221 atccctttac cccatccact tttcttgctt acattttaat cattttatat gccgcgaagt
    14281 agagcagtgg ttagctcgtc gggctcataa cccgaaggtc gggagttcaa atctcccctt
    14341 cgcaaccagt tataacttgc atactataag ctaaatcgta aagattagaa ttttttgcaa
    14401 gcttttaaaa gaactttttt gataaagtta taatattcta agattttaga gtatttaatt
    14461 ataaaaataa taacattctt ctttcaatct cactggcatt agagcatata aaataaagaa
    14521 tttaaagcac cacttttggg cttagttaaa aagcttttac cacattttat gcatttttga
    14581 aatagtttta ttattgctta tttttctatt gttgaaaatt ccatttcttt tttgaagttt
    14641 tttcaatttt atatatctta aaatgaattt aacatcgtga aaatcaaact caaattcatt
    14701 gtttttcatt ttttctcctt gttttaaaat aacaaagaaa gtataatttc ctcttgcgac
    14761 agcttgtgtc gtaaaaaata acttttttgt tgaaactagc ccgtaaattc agtagcttca
    14821 taacctatag gtttatctac aaaacaagat ttttctttta aaaatataac ctctatagtt
    14881 ccaacaggcc catttctatt ttttccgacg ataatttcag cattttcttg catagggttt
    14941 ggtataaaaa atctttgata agctttgccc tcagctttag ccttattttc tttttctttt
    15001 tcttcttgtt ctctataaac ctcatcacga tacacaaaca aaatagcatc cgcatcttgc
    15061 tctatagctc cactttctct taggtcactc atcaaaggac gcttatttgc tctttgctcc
    15121 aaaccacgat taagttgcga aagtgcaata ataggcatat caagttccct agctaaaagc
    15181 ttaagtcctc ttgaaatttc actaacttgt aaatgcctat cattaaaatt tgaattactc
    15241 atcataaggc ctatatagtc aattacacaa agtcctatgc tctcatcttg agatttcaaa
    15301 cgccttaaaa tagcccttac atcagcaatg gtagcatatc cgctatcata gatatacaat
    15361 ttcttttgac tataatcatt acaagcatct cctaaacgcc cccattcatc atcgtttaaa
    15421 tccgcggtta aaattttttg caaagggata gaagtttttg aagagagcat tctttgcatg
    15481 atttgagttg caggcatttc aagagaaaat aaagccactc ctttatcctg ccttaaagcc
    15541 ttatcaataa aatttaaaca aagagttgtt tttcccatac ctgggcgcgc agcaattatg
    15601 ataagttctc ctgccttaaa gccttttgtc attttattta aaccctcaaa acctgtatca
    15661 agtcctataa tgcttctatt ttctaaagtt ttttgctttg taaattctcc aaaaagttct
    15721 gataatacga ttttaatatc tttaatatct ttagaattga cacgatttgt aatattaaaa
    15781 atttctttgc taatttcatc tgcaatttcg cttacagcac gattttcatt aatacgggtt
    15841 ggcaaaagat gtgcaaaact caaaagttgt cttttaatag acttttcacg aagttcattt
    15901 acataagcag gcaaatctat catagaagga gtggcaagaa tttctgttat aatttgttcg
    15961 tctatttttt cgtattttct taaaaaactc agggaaatag gagctccttg cttagaacaa
    16021 gccataattg ctttaaaaat atcttgatgt gctttaagac taaaatcttt tggaccaatc
    16081 tcacctgcta tactagcata agcttcttca ctcaaaatac aactgcttaa aatagcccgt
    16141 tctaaatcca agtcataata ctcttgttgc actaaatttc ctttataaat ataaattgat
    16201 ttaaaaattc tatccaaaaa aacttaaaat ataaaac
//
LOCUS       DAPWAA010000034        16228 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.034, whole genome shotgun sequence.
ACCESSION   DAPWAA010000034 DAPWAA010000000
VERSION     DAPWAA010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16228)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16228)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16228
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.034"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..272
                     /locus_tag="RTF91_001053"
     CDS             <1..272
                     /locus_tag="RTF91_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDZ4943941.1"
                     /translation="LPKIIDEKIKQSHHIEKQLNHLLVNQMRYNELKLDKLQNVYSQH
                     ENFFNKSKKFICVRKNGKIASLEELESEDIVILSSQTSQKEAKIL"
     gene            282..1358
                     /gene="serC"
                     /locus_tag="RTF91_001054"
     CDS             282..1358
                     /gene="serC"
                     /locus_tag="RTF91_001054"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HDZ4943942.1"
                     /translation="MRKINFSAGPSTLPLEILEQAQRELCDYQGKGYSIMEISHRTKV
                     FEEVHFGAQEKAKKLYGLNEDYEVLFLQGGASLQFAMIPMNLALNGVCEYANTGVWTK
                     KAIKEAQILGINVKTVASSEESNFNHIPKVEFSDNADYAYICSNNTIYGTQYQNYPKT
                     KAPLIVDASSDFFSRKVDFSNIVLFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPS
                     MLNYFTHVENQSLFNTPPTFAIYMFNLEMDWLLDQGGLDKVHEKNSQKATMLYECIDL
                     SNGFYKGHADKKDRSLMNVSFNITKNADLEPLFVKEAEESGMIGLKGHRILGGIRASI
                     YNALNLDQVKTLCEFMKEFQGKYA"
     gene            1355..1643
                     /locus_tag="RTF91_001055"
                     /pseudo
     CDS             1355..1643
                     /locus_tag="RTF91_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343765.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
     gene            complement(1667..2641)
                     /locus_tag="RTF91_001056"
     CDS             complement(1667..2641)
                     /locus_tag="RTF91_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDZ4943943.1"
                     /translation="MLKASLKSIASYIPEKILSNADLEKMVDTTDEWITRRTGIKERR
                     IASEHENTSDLGTKAALKAIERANLKPKDIDAILVATLSPDYFTMPSTACKIASNLGL
                     VNISAFDISAACSGFIYLLEQAKALVESGLKKNVLIIGAEKTSSIMDYNDRSICILFG
                     DGAGAGIVSLDKENHILDVHTASNGNYGDLLMTQRSQKSNSCQTLSMQMKGNEVFKIA
                     VNTLSNDVVEILAKNKILAQEIDLFIPHQANLRIIKAVQEKLNLSDEKCVITVHKYGN
                     TSAASIPMAMNDAYEEGRLKKGNLILLDAFGGGFTWGSALLKFGGENF"
     gene            complement(2634..3620)
                     /gene="plsX"
                     /locus_tag="RTF91_001057"
     CDS             complement(2634..3620)
                     /gene="plsX"
                     /locus_tag="RTF91_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDZ4943944.1"
                     /translation="MINIAIDAMGGDFGEKPIIEGVLKALEAKPFNAILVGNSKILKP
                     LIPKKLEQYIQYEEACEIFSMNESATDALKNKETTIYKAISLLKEKKVDAVVSAGHSG
                     ASMSLATLRLGRLKGISRPAIATLMPNIVSKTLLLDVGANTDCKAENLFQFAIMGEVY
                     AREIMQIQRPRLALLSNGEEECKGNELTKESHQLMKKIPNFIGNAEGRDIFNGEIDVL
                     VCDGFDGNVILKACEGVATAIFQLLKNEVKQSFVSKIGALLMKPSFKKLKKHTDWQEY
                     GGAPLLGVNGCVIISHGKSDSRAIKNAIFQAINFSQSHINELIENELGKYNA"
     gene            complement(3626..3772)
                     /gene="rpmF"
                     /locus_tag="RTF91_001058"
     CDS             complement(3626..3772)
                     /gene="rpmF"
                     /locus_tag="RTF91_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDZ4943945.1"
                     /translation="MAVPKRRVSKTRAAKRRTHYKVSLPMPVKDKDGSYKMPHRANPT
                     TKEY"
     gene            complement(3795..4148)
                     /locus_tag="RTF91_001059"
     CDS             complement(3795..4148)
                     /locus_tag="RTF91_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943946.1"
                     /translation="MKIAFSKINTKEYPFKLNLENMIFEGNLVKINPKLVKINAIMQG
                     FIYRPCDSCGTELELEIKENLELFASDGIFKDKANELSNTIEFFDGHIDLIEVAISEL
                     EAYLSDYFYCANCNN"
     gene            complement(4149..4562)
                     /gene="ndk"
                     /locus_tag="RTF91_001060"
     CDS             complement(4149..4562)
                     /gene="ndk"
                     /locus_tag="RTF91_001060"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDZ4943947.1"
                     /translation="MEKTLSIIKPDAVRKGVIGKILDRFENNGLRIAAMKKIQLNKEQ
                     AENFYAVHKERPFFKDLVEFMISGPVVVSVLEGENAVLKNRDLMGATNPKEAKAGTIR
                     ADFAESIDANAVHGSDSLENAKIEIEFFFKSNEIC"
     gene            complement(4718..4949)
                     /locus_tag="RTF91_001061"
                     /pseudo
     CDS             complement(4718..4949)
                     /locus_tag="RTF91_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343771.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
     gene            5147..5743
                     /locus_tag="RTF91_001062"
     CDS             5147..5743
                     /locus_tag="RTF91_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDZ4943948.1"
                     /translation="MIVTKKALDFTAPAVLGNNEIVQDFNLYKNIGPKGAVVFFYPKD
                     FTFVCPSEIIAFDKRYQEFKNRGVEVIGISGDNEFSHFAWKNTPVNQGGIGQVKFPLV
                     ADLTKQIARNFDVLYAEAVALRGSFLLDADGTVRHAVVNDLPLGRNIDEMLRMVDTML
                     FTNEHGEVCPAGWNKGDEGMKADPKGVAEYLGKNEAKL"
     gene            5861..6949
                     /gene="flhB"
                     /locus_tag="RTF91_001063"
     CDS             5861..6949
                     /gene="flhB"
                     /locus_tag="RTF91_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HDZ4943949.1"
                     /translation="MASEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTV
                     TLLMMGFMGERIVNLYRYYQSFIGVEFDLRIIQAIMIKSIFEVLIILAPIVLSIMVAG
                     VLGNIMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKLVESVKIILKVGIVFTIAFI
                     VLLKFMQELPRVELYTMVAQLTWLRDRAIVLAAIVMVAFLIIAVLDVFLVRFQYFKGL
                     RMSKQEIKDEYKQMEGDPQVKGRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIR
                     YDTSKEQAPRVVAKGVDFLALRIKQVAYENNVVVYENPPLARELYKACDVNDLIPREM
                     FKAVAEVLGFVYNTNNKSRLAGQVKKGN"
     gene            complement(6956..7699)
                     /gene="motB"
                     /locus_tag="RTF91_001064"
     CDS             complement(6956..7699)
                     /gene="motB"
                     /locus_tag="RTF91_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HDZ4943950.1"
                     /translation="MAKKHKCPECPAGEKWAVPYADFLSLLLALFIALWAISKTNPAK
                     VEALKTEFVKIFDYTSTQTVKEESKTQEKYKSTAKEESDELKSLKQMTMTQQETIKRL
                     QAALDQSDNQIALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGY
                     TDNSDSILRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPINGNPQTLENNRV
                     EIYFKVDTADTSTQKSVLELINKIGTKTP"
     gene            complement(7702..8478)
                     /gene="motA"
                     /locus_tag="RTF91_001065"
     CDS             complement(7702..8478)
                     /gene="motA"
                     /locus_tag="RTF91_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HDZ4943951.1"
                     /translation="MDLSTILGMVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAA
                     FCAMTATHKKIVKAAYKDLKIVFKGSGVNLPERIAQLIEFAIIARRDGLLALESKTGE
                     IENEFLKSAMMMLVDGKSFEEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVG
                     AVFGLILALKLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGKKLKANGMDLVKEQ
                     IVITEAIKGIAEGANPRDLEAKLFNFLSHDDPRISQFDKG"
     gene            complement(8494..11133)
                     /gene="polA"
                     /locus_tag="RTF91_001066"
     CDS             complement(8494..11133)
                     /gene="polA"
                     /locus_tag="RTF91_001066"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDZ4943952.1"
                     /translation="MKTLTIIDTFGFFFRLYYALKGLKNSQGQASGMISGFANFIYSL
                     KNEHKSDYIIFALDSKGKTFRSEIDPNYKQNRTPPPPELLEQIPICIEMIEKMGFISV
                     SQEGYEADDIIASFVKICKDKDIFVRIITQDKDLYQLIKDGKTDIYSPISKNNYNEAA
                     CLEKYGVKPCQIRDFLALCGDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVR
                     NERSRTLLLEGKENAFLSKKLASLYENLEVQNLIEKAIYPDEEPLLKILEILEHYELN
                     TLLKKLRQNPDNKDKNLGFKATLIQDENKLFEILNTLDKESIIAFDTETTGLDTKEAK
                     IVGFSFCMNENEAFYVPLTHNYLGVGEQISLQSAKKAIELIFNHFVIGHNLKYDFKII
                     QNNFNLALPQKYADTMILAWLKNPSLRVNMDDLALRLFNYETLHFESLVKKGENFTSV
                     ELEKACKYAAEDAYITLRFYLYFLKNLETPLLELAKTCEFDFIKIIMMMEENGIKLDT
                     NALEILMKKFENEIKNLSEEIYILCEDRFNLNSPKQVGDILFEKLKLPSGKKGKTGYS
                     TDEKVLNALLDKHPVIAKILDYRELAKLYSTYCEPLLKLALKDKNSRIYSSFLQTGTA
                     TGRLSSKDPNLQNIPAHGQYAKNYKSCFVAKEGFSFISLDYSQIELRMLAHFSEDEKL
                     LNAFANDEDIHVRTAMMIFGESNYETRSVAKSINFGLIYGMGYKTLSQNLKIEASLAK
                     SYIEKYFENFTSIKKYFEKIKNEAKQNGFITTLSGRKRYFDFENAKPMQIAMYERESI
                     NSILQGSAADVIKLAMLEINKELNEDKKLILQIHDELIFEVKDKLCENFVKKTRDIME
                     NIVKLKVKLKTSSSIAKNWGDLK"
     gene            11598..11814
                     /locus_tag="RTF91_001067"
                     /pseudo
     CDS             11598..11814
                     /locus_tag="RTF91_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343778.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
     gene            complement(11905..12348)
                     /locus_tag="RTF91_001068"
     CDS             complement(11905..12348)
                     /locus_tag="RTF91_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDZ4943953.1"
                     /translation="MFDFLYSNISYLGLFIVCFLSSTLLPLASEAFVLGFIKLDFNPH
                     LVLIIATLGNTLGSLSTYTLAYFGKEKILEKYFRKSLKKLENFNANFVKFGSVFAFLS
                     FLPLIGDLFVLGLGFTKYSFLKTIFFILLGKLSRYAFIIFIANSF"
     gene            complement(12355..15180)
                     /gene="uvrA"
                     /locus_tag="RTF91_001069"
     CDS             complement(12355..15180)
                     /gene="uvrA"
                     /locus_tag="RTF91_001069"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDZ4943954.1"
                     /translation="MNNTIKIIGARENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFG
                     TLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGLTPSIAIDQKTTSKNPRSTVGTI
                     TEIYDYLRLLYARVGIQHCHQCGKKISSMSASDIVSEILKFPQGAKIIIYAPLIREKK
                     GTYVDLLENLRNKGYVRAQIDGVLVRLDEEIELAKTKKHTIKLVIDRLEIQENLLSRL
                     ANDIEKGLQESFGEIEIEVLNHEEINLNKHYHFSEHSACFDCKISFIPLEPLSFSFNS
                     PKGACEACDGLGIRYTLDMKKIIDENLSLENGAVKIMYGFNKSYYYKFLIAFCEQNEI
                     SIKIPFVELSEEQKRLVLYGNAKTIEFFWKRNRLKRTFEGVVKMAYEMLKDEKDLGEY
                     MSEKICKDCGGHRLKPESLAVKVAKKGLGEILDMSIEDSTAFFADEKKFSYLSEQQKL
                     ICKPILKEINERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYVL
                     DEPSIGLHERDTEKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKAGKFGGE
                     VVFSGTYKELLKSKSQTALYMNGKKQISQLQNRAQKEWLELKNVNINNIYNLSVKFPL
                     QNLVAITGVSGSGKSSLILQTLLPFAQEELNRAKKVKKLGGVKIEGLEKLDKVIYLDQ
                     SPIGRTPRSNPATYTGTMDEIRNLFAATKEAKMRGYKAGRFSFNVKGGRCEKCSGDGE
                     IKIEMHFLPDVMVVCDTCHGKRYNDATLEIKYKGKNISEILNMSVLEASEFFAAVPKI
                     KQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLH
                     FEDVNKLILVLQHLVDLKNSVFVIEHNLDVIKNADYIIDMGPEGGVKGGKVISTGSVE
                     KVAKEHKKTHSYTGYYLDLELKNIQKS"
     gene            complement(15255..16040)
                     /locus_tag="RTF91_001070"
     CDS             complement(15255..16040)
                     /locus_tag="RTF91_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDZ4943955.1"
                     /translation="MEIADLPYLIIGIISGITSGLFGIGGGMIIVPSMFALGASAHHA
                     IGISVLQMIFAAVFGSYINYRKKNLNLKDGIMIGFGGLIGASFSGMLLKALSDVALTS
                     IFLTVSCIFFIKYAFEIKGNIVKNQRSVWVKNVILFIAGAFTGIFAISLGIGGGLLIA
                     PILAYFLGYDSKKVVSLSLFFVIFASVSGIISFSNSEVIDSEVIHKGILVGIASMVGV
                     FIGIKIIEKMHISAHRKILLCVYALSILGTTHSLLNKLNLINF"
BASE COUNT         5318 a         2552 c         2459 g         5899 t
ORIGIN      
        1 ctttgccaaa aataatagat gaaaaaataa aacaaagtca tcatatagaa aaacaactga
       61 accatttact agtaaatcaa atgcgttata atgaattaaa attagataaa ttacaaaatg
      121 tttattcgca gcatgaaaat ttttttaata aaagcaaaaa gtttatttgt gtcagaaaaa
      181 atggcaaaat agcgagttta gaagagcttg aaagtgaaga cattgttatt ttaagttctc
      241 aaacttctca aaaagaagca aaaattttat aaggatagat tatgagaaaa atcaatttca
      301 gcgcagggcc atcaacttta cctttggaaa ttttagaaca agctcaaaga gaactctgtg
      361 attatcaggg taaaggttat tctataatgg aaatttcaca ccgcacaaag gtatttgaag
      421 aagtgcattt tggagcacag gagaaagcta aaaaacttta tggattaaat gaggattatg
      481 aagtattgtt tttgcaaggt ggagcaagtt tgcaatttgc tatgattcct atgaatttag
      541 ctttaaatgg ggtttgtgaa tacgccaata ctggagtttg gacaaaaaaa gcgattaaag
      601 aagcacaaat tttaggtatc aatgttaaaa ctgtagcaag cagcgaagaa agtaatttta
      661 atcatattcc taaggtagag tttagtgata atgcagatta tgcttatatc tgttcgaata
      721 atactatcta tggtactcaa tatcaaaatt atcctaaaac taaagctcct ttgattgttg
      781 atgcatcgag cgattttttt tctagaaaag tagatttttc aaatattgtt cttttttatg
      841 gtggagtaca aaaaaatgct ggaatttcgg gtttaagttg tatttttatc cgtaaggata
      901 tgttagaaag atctaaaaat aagcaaattc ctagcatgtt aaattatttt actcatgttg
      961 agaatcagtc tttgtttaat acgcccccaa cttttgctat ttacatgttt aatcttgaaa
     1021 tggattggct tttagatcaa ggcggccttg ataaagtgca tgagaaaaat tcccaaaaag
     1081 ctaccatgct ttatgaatgc attgatttaa gtaacgggtt ttataaaggg catgcagaca
     1141 aaaaagacag atccttaatg aatgtaagtt ttaatattac taaaaatgca gatttagaac
     1201 ctctttttgt aaaagaggct gaagaatctg gaatgatagg acttaaagga catagaattt
     1261 taggaggaat ccgtgcaagt atttataatg cactaaattt ggatcaagtg aaaactttat
     1321 gtgaatttat gaaagaattt caaggaaaat atgcatgata aagcgttttg ataagtgcta
     1381 tagaatgtcg tagattatcg tttgtgataa atattttaaa actgcgagca agtagctttt
     1441 gaaccaagtg ggacattaaa aagcaaacta aagaagctct tgtagaattt gaaaaataag
     1501 tgcaagcaaa gaggatttaa tccaaattca aatttggttg gctaatatgc aagattttga
     1561 aatttatgat gcttggataa aaattaacct gttagagctt gtgtgggaat gctttagcag
     1621 aaggttattt agtagaaatt taagcttttg gaagactaag agagggttaa aaattctctc
     1681 ccccaaattt taaaagagca gacccccagg taaaaccacc accaaaagca tctagtaaga
     1741 tcaaatttcc ttttttaagt cgaccttctt cataagcatc gttcattgcc ataggtatag
     1801 aagcagctga agtattgcca tatttatgca ctgtaataac acatttttca tcgcttaaat
     1861 tgagtttctc ttgaactgct ttaatgatac gtagattagc ttgatgagga atgaaaagat
     1921 caatttcttg tgctaaaatt ttattcttgg ctaaaatttc tacaacatca ttactgagtg
     1981 tatttactgc tattttaaaa acttcattac ctttcatttg catggagagt gtttgacatg
     2041 agtttgattt ttgcgatctt tgagtcatta aaagatctcc ataattgcca ttgcttgcag
     2101 tatgtacatc aagtatatga ttttctttat ctaaacttac aattccagct cctgcgccat
     2161 ctccaaagag tatgcaaata cttctgtcat tatagtccat aatggaactt gttttttcag
     2221 ctcctatgat taaaacattt tttttcaagc cactttctac taaagcttta gcttgttcaa
     2281 gtaaatagat gaaaccagag caagctgctg aaatatcaaa agcactaata tttacaagtc
     2341 ctaaatttga agcaatttta caagctgttg aaggcatggt aaaataatca ggacttaaag
     2401 tagctacaag aatagcatca atatctttag gctttaaatt tgctctttct attgctttta
     2461 aggcggcttt tgtgcctaaa tcacttgtat tttcatgttc actagcaatg cgtctttctt
     2521 taatacctgt gcgtctagtg atccattcat cggtcgtatc taccattttt tcaagatcgg
     2581 cattacttaa aatcttttct ggaatataag aagctatact tttaagactt gctttaagca
     2641 ttgtattttc caagttcatt ttctataagt tcgttgatat gagattggct aaaatttatg
     2701 gcttgaaaaa ttgcattttt aatagctcta gaatcacttt ttccatgact tataatcaca
     2761 caaccattaa ctccaagaag aggtgctcca ccgtattctt gccaatctgt atgttttttt
     2821 aattttttaa aagatggttt cataagcaaa gcaccaattt tagaaacaaa agattgtttt
     2881 acttcatttt ttaaaagttg aaaaatagcc gttgctactc cttcacaagc ttttaaaatc
     2941 acattgccat caaaaccatc acagactaaa acatctattt caccattaaa aatatctcta
     3001 ccttcagcat tacctataaa gtttggaatt tttttcataa gttgatggct ttctttggta
     3061 agttcattgc ctttacattc ttcttcacca ttagaaagta aagcaaggcg tggtctttga
     3121 atttgcatga tttctctagc ataaacttcg cccattatgg cgaattgaaa taaattttca
     3181 gctttacaat ctgtattagc tcctacatct aaaagcaaag ttttgctaac aatatttggc
     3241 attaaagtag caatagcagg tcttgaaatg cccttaagtc ttccaagtct taatgtagct
     3301 aaagacatac ttgctccact gtgaccagct gaaactacag catctacctt tttttctttt
     3361 aataaactga tagctttata tatggttgtt tctttatttt ttaaagcgtc agtggcgctt
     3421 tcattcatcg aaaaaatttc acaggcttct tcgtattgta tatattgttc taattttttt
     3481 ggtattaaag gttttaaaat tttagaattt cccaccaaga tagcgttaaa aggttttgct
     3541 tctaatgcct ttaaaacgcc ttctataatg ggtttttctc caaaatcacc acccattgca
     3601 tcaatggcaa tgttaatcat tgattttaat attccttggt tgttggattc gcacggtgag
     3661 gcattttata gcttccatct ttgtctttca caggcatagg aagactaact ttataatgag
     3721 ttctgcgttt agctgcacga gttttactca ctcttctctt tggtaccgcc attttatctc
     3781 ctttataaat ttagttaatt attgcagttt gcacaataaa aataatcact taaataagct
     3841 tcaagctcac tgatagcaac ttctattaaa tcaatgtgtc catcgaaaaa ttctatagta
     3901 ttgctcaatt cgtttgcttt atctttaaaa ataccatcac ttgcaaaaag ttctaaattt
     3961 tctttaattt caagttctaa ttcagttcca caactatcac aaggtctata aataaaacct
     4021 tgcataatag catttatttt aacaagttta ggatttattt ttactaaatt tccttcaaaa
     4081 atcatatttt caagattaag tttaaaagga tattcttttg tattaatctt agaaaaggcg
     4141 attttcattt agcaaatttc atttgactta aagaaaaatt caatttctat ttttgcgttt
     4201 tctaagctat cactcccgtg aacagcattt gcatcaatac tttcagcaaa atcagctcta
     4261 attgttcctg ctttagcttc tttaggattt gttgctccca ttaaatctct attttttaat
     4321 acagcgtttt ctccttctaa tacagaaaca acaacaggac cgctaatcat aaactcaact
     4381 aagtctttaa aaaaaggcct ttctttgtga acagcataga aattttcagc ttgctctttg
     4441 ttaagttgaa tttttttcat tgcagcgatt cttaatccat tgttttcaaa acgatctaaa
     4501 atttttccta taacgccttt tctaacagca tcaggtttaa ttatagataa agttttttcc
     4561 atcttgtaat aactccttat tttaataaag cttaaaatta tacttgaatt tgttttaaag
     4621 aaagttaaat taaaagctag gaatctctag cttttaattt tttaaaatta tgcaaaaact
     4681 ggagtgtttc tgcttctcat atcagcatat tgcgatttta ctgtcctgat tctacagcat
     4741 tctatactac acatccatct gttggacagg tgctagcaca agctggttga tcattatgtc
     4801 ttacacatgc gacacattta tttgtattag cataaatatc tgtcttcgcc ttctggattg
     4861 ttggcatcat caatgatagc actcactgga cacttatcta tgcaagaatc acaagcaata
     4921 catactatga ctgtaatttt tacagccatt ttttctcttc tataatttta taagatttat
     4981 tagtaagtaa aaagatttta gcgtaaaatt cttaaataat gtaaattttg ataataatta
     5041 taactttact taaattttta atattatttt ttggatattt aaaaaaaaat aaagatttaa
     5101 acgatataat tttgctatca ataaaattta ttatttagga gaaagtatga tagttactaa
     5161 aaaagcttta gatttcactg ctccagcagt attaggaaac aatgagattg ttcaagattt
     5221 taatctttat aaaaatatag gtccaaaagg agcagtggta ttcttttatc caaaagattt
     5281 tacttttgtt tgtccttcag aaattatagc tttcgataaa agatatcaag aatttaaaaa
     5341 tcgtggtgtt gaagtaatcg gaatttcagg agacaatgaa ttttcacatt ttgcttggaa
     5401 aaatactcca gtaaatcaag gtggtattgg tcaagttaaa ttcccacttg ttgctgactt
     5461 aactaaacag attgctagaa attttgatgt gctttatgca gaagcagttg cacttcgtgg
     5521 ttcgttcttg cttgatgctg atggaacagt acgtcatgct gtggttaatg atttgccatt
     5581 aggtagaaat atcgatgaaa tgttaagaat ggttgatact atgcttttta caaatgagca
     5641 tggtgaagtt tgccctgcag gatggaataa gggtgatgaa ggtatgaaag ctgaccctaa
     5701 aggtgtagct gaatatcttg gtaaaaacga agctaaactt taattttata gtgcaaagcc
     5761 tctttatggg gctttttctt catttttatt ctttaattaa aattcatcaa ttttctatta
     5821 taattttata catattcaat atttttattt aggctaaaat atggcaagtg aagatcaaga
     5881 aaaaacagaa gagcccacgt ccaaaaaaat cgaagatgca cgtaaagaag gtaatgttcc
     5941 aaagtctcaa gatgcagcag ctattgtaac cttgataatc ggagtaactg taaccttatt
     6001 gatgatgggt tttatgggtg agagaattgt aaatttgtat agatactatc aaagttttat
     6061 tggtgttgaa tttgatttgc gtattattca agctattatg attaaaagta tttttgaagt
     6121 tttaattatt cttgcaccca ttgttttaag tattatggtt gctggagttt taggaaatat
     6181 tatgcaattt ggttttattt ttacaaccaa acctattatg ccaaatttag gaaaaattaa
     6241 ccctctgaaa ggtttaaaaa atcttttttc attgaaaaaa cttgttgaaa gtgtaaaaat
     6301 tattttaaaa gtggggattg tttttactat agcttttata gttttgctta aatttatgca
     6361 agaacttcca agagttgagc tttatactat ggttgcacag cttacttggt taagagatag
     6421 ggctattgtt ttagcagcta ttgttatggt tgctttttta attattgctg ttttagatgt
     6481 ttttttagtg cgttttcagt attttaaagg tttgcgtatg agcaaacaag aaattaaaga
     6541 tgaatataaa caaatggaag gagatcctca agttaaaggc agaattcgta gacttcaaat
     6601 ggaagctgca cgtcgccgta tggttcaaga tgttgcaggt gcagatgtgg tgattacaaa
     6661 tccaacgcat tatgctgtag ccattcgtta tgatacgagc aaagaacaag ctcctagagt
     6721 tgttgctaaa ggagtagatt ttcttgctct tcgtataaaa caagtagcct atgaaaataa
     6781 tgttgtagtt tatgaaaatc ctcctttagc aagagaactt tataaggctt gtgatgttaa
     6841 tgatcttatt cctagagaaa tgtttaaggc cgtggctgag gtattaggat ttgtttataa
     6901 tacaaacaat aagagtcgtt tagctggtca agtaaaaaaa ggaaactaaa aacctttaag
     6961 gtgttttagt tcctatttta tttataagtt caaggacaga tttttgagta cttgtgtctg
     7021 ctgtatcaac tttgaaatat atttctaccc tattattttc taaagtttgt ggatttccat
     7081 taatgggatt attaagccca taacttttaa tactgatatt ttttaaattt gctccacctt
     7141 ctataaaata tttcaacaca ttttctgctc tttggtaggc tagctcataa cttctcaata
     7201 tagaatcact attgtctgta tagcctctaa tttctatttt tgcttgaggt ggtaagtatg
     7261 ttgttagttc tgccatgcgt tttaaatagt cttgtatatc tgctgaaacg atttgagcac
     7321 tacctctttc aaattcaact ttagatggga gattaagtgc aatttgattg tcgctttgat
     7381 ctaaggctgc ttgaagacgc ttgatggttt cttgctgtgt catagtcatt tgttttaaag
     7441 atttaagttc atcactttct tcttttgctg tacttttata tttttcttga gttttacttt
     7501 cttctttaac tgtttgagta gatgtgtaat caaaaatttt aacaaattca gtttttagtg
     7561 cttctacttt agcaggattt gttttagaaa ttgcccaaag agcaataaag agtgctaaaa
     7621 gcaaactcag aaagtccgca taaggcacag cccatttttc acctgctgga cattctggac
     7681 atttatgttt cttagccatt tttaaccttt gtcaaattgt gaaattcttg gatcatcatg
     7741 acttaagaaa ttaaaaagtt tagcttccaa gtctctagga ttagcacctt ctgcaattcc
     7801 tttaattgct tcagtaatta caatttgctc ttttacaaga tccattccat tggcttttaa
     7861 ttttttcccc caaggtgcaa aaagtgcata agcaccaaaa atcccagtaa ctgtagctgt
     7921 aaaagcacct gaaatacctg ctgccattgc ttgaggattg tctagcaatt taagagccaa
     7981 aataagacca aaaactgctc caacaagtcc catagttggg caagtttctc caaaaactat
     8041 ccaatattct gcacattctt tataatgttc ttcaagttgt tcagtttgta tttccatact
     8101 ttcgtgaatt tcttcaaagc ttttaccatc tacaagcatc atcatagcac tttttaaaaa
     8161 ttcattttca atttcacctg tttttgactc tagtgctaaa agtccgtctc ttcgtgcaat
     8221 aatagcaaat tctattaact gagctatcct ttcgggtaaa tttacgccag aacctttaaa
     8281 aacaattttg aggtctttat aagctgcttt gacaattttt ttatgtgtag cagtcatcgc
     8341 gcaaaatgca gccgttggca taactataag aaaggaagaa aggtgaataa catgcaaagg
     8401 attacctcct tctagtatat ctcctactga aatactagta accgcaagca ccattcctag
     8461 tatggttgaa agatccatta aatatctcct tgattatttt aaatcgcccc agtttttagc
     8521 aatacttgag cttgttttta attttacttt taattttact atattttcca taatatctct
     8581 agtttttttc acaaaatttt cacataattt atcttttact tcaaaaatta attcatcgtg
     8641 aatttgtaaa ataagctttt tatcttcatt tagttcttta ttgatttcta acattgcaag
     8701 tttgattaca tcagctgctg agccttgtaa gatggaatta atactttctc tttcatacat
     8761 ggcaatttgc ataggttttg cgttttcaaa atcaaaataa cgcttacgcc cgcttagagt
     8821 agtgataaag ccattttgtt tagcttcatt tttaattttt tcaaaatatt ttttaatgct
     8881 tgtgaaattt tcaaaatatt tttctatata agatttagct aaactagctt ctatttttaa
     8941 attttgactt aaggttttat agcccatacc ataaataagt ccaaaattta tactttttgc
     9001 gacacttcta gtttcataat tgctttcacc aaaaatcatc atagctgttc ttacatgtat
     9061 atcttcatcg tttgcaaaag catttaaaag cttttcatct tcgctaaaat gtgcgagcat
     9121 tctaagttcg atttgagaat aatcaaggct aataaaacta aacccctctt tagctacaaa
     9181 gcaagatttg taattttttg cgtattgtcc gtgtgcaggg atattttgta agtttggatc
     9241 tttagatgaa agacgtcctg tagcggttcc agtttgtaaa aagcttgagt aaatgcgtga
     9301 atttttatct tttaaagcaa gttttaataa aggctcacaa taagttgaat aaagtttagc
     9361 aagttctcta taatctaaaa ttttagcaat aacaggatgt ttatctaaaa gcgcatttaa
     9421 aaccttttca tcggtagaat atcctgtttt accctttttt ccacttggga gcttgagttt
     9481 ttcaaaaagt atatcaccta cttgtttagg tgagtttaga ttgaatctat cttcacaaag
     9541 aatataaatt tcttcgctta aatttttgat ttcattttca aattttttca taaggatttc
     9601 aagcgcattt gtatcaagct taataccgtt ttcttccatc atcataatga ttttaataaa
     9661 atcaaattca caagttttag caagctctaa taaaggagtt tcaagatttt ttaaaaaata
     9721 aagataaaat cttaaagtaa tataagcatc ttctgctgcg tatttacaag ctttttcaag
     9781 ttctacactt gtaaaatttt ctcctttttt aacaagactt tcaaaatgta aggtttcgta
     9841 attaaaaagc cttaaggcta aatcatccat atttactctt aaagaaggat ttttaagcca
     9901 tgctaaaatc atcgtgtctg catatttttg aggtaaagct aggttaaaat tattttgaat
     9961 aattttaaaa tcatatttaa gattatgccc tataacaaaa tgattaaaaa ttagttctat
    10021 agctttttta gcactttgta atgaaatttg ttcgcctact ccaagataat tatgagttaa
    10081 aggcacataa aaggcttcat tttcattcat gcaaaaacta aaaccgacaa tttttgcttc
    10141 tttggtatca agccctgtag tttcggtatc aaaagcaata atactttctt tatcaagagt
    10201 atttaggatt tcaaaaagtt tgttttcatc ttgtattaaa gtggctttaa aacctaaatt
    10261 tttatcttta ttatcaggat tttgacgcag ttttttaagc aaggtattaa gttcataatg
    10321 ttctaaaatt tcaagtattt ttaaaagagg ttcttcatca ggataaatag ctttttctat
    10381 aagattttgc acttctaaat tttcatatag agaggctaat tttttactta aaaatgcatt
    10441 ttctttaccc tctaaaagta aagtacgact tctttcattg cgcactaggg ttaaattttc
    10501 gtaaattcct tctatgctgc caaactcatc aagcaaggtt ttagctcctt ttgcacctat
    10561 gcctttaact ccagggatat tatcagaact gtctccgcaa agagctagaa aatctctgat
    10621 ttgacaaggt tttactccgt atttttctaa acatgctgct tcattataat tatttttaga
    10681 aatagggcta taaatgtctg ttttaccatc ttttataagt tgataaagat ctttatcttg
    10741 agtgataata cgtacaaaaa tatccttatc tttgcaaatt tttacaaaag aagcgatgat
    10801 atcatcagct tcatagcctt cttgtgaaac gcttataaat cccatttttt ctatcatttc
    10861 tatacaaata ggaatttgtt ctaggagttc aggcggtggt ggagtgcgat tttgtttgta
    10921 gtttggatca atttcgctgc gaaatgtttt tcctttagag tctaatgcaa aaataatata
    10981 atcgctttta tgttcatttt ttaaactgta gataaaattt gcaaagccgc taatcattcc
    11041 actagcttgt ccttgtgaat ttttaagacc ttttagagcg taataaagtc tgaaaaaaaa
    11101 tccaaaagtg tcaataatag ttaaagtttt catagtgatt tcttctttga taaaatatat
    11161 tttcgaatta tattatttca aaattttgct taaaatgtct agaattgaag atctttaagc
    11221 aaaaacactg taatttaaaa atatattaaa atataagtat aatctaataa caaacttggt
    11281 aaatcgatgg aattacaaat aaaattttaa cacaccaaga aggtaagaaa gtttttaagc
    11341 aaggtagttt tttcttacta ttagggaatg aaatgatgaa attgcgtttt aattaatgaa
    11401 aagtatataa aaaagttttg gcaaagaagt cgtgcttttt gaactatagt gggtttaaga
    11461 atacgtaaaa atagtcttct tatatagagt aaggttttat gtggctactt tttgtaccag
    11521 aaactagagg tagagattta aataaaatag aagatgctat tgagactcat cttagacacg
    11581 gatataggta atgttatttt gtaggagcaa gtaaagcctt gaaagaacca aataaagctt
    11641 ggtatcaaag acttgatgaa aatgtaaaaa attttaaact cgaatatctt tgggaaaata
    11701 taaatcctga tttgatttaa aatgggtgaa ttagtcagta aaaatcctaa agaaatttct
    11761 atttgtcctg gttctttgac aaatattgct atggctgtga aaatttttaa agagcttttt
    11821 atatgggtga cagttttaat atgccttatt aaaaattgtg tcgaaatttt aaaaaatata
    11881 gatagtgtaa ttataaaaga tattttaaaa ggagtttgct atgaaaatta taaaagcata
    11941 acggcttaat tttccaagca agataaaaaa tatagttttc aaaaaagaat atttagtaaa
    12001 acctaatcca agtacaaaaa gatctcctat taaaggtaaa aagctcaaaa aagcaaacac
    12061 acttccaaat ttaacaaaat tggcattgaa attttctagt ttttttaatg attttctaaa
    12121 gtatttttct aaaatttttt cttttccaaa ataagctaga gtataagtgc ttaaacttcc
    12181 taaagtattt cccaaagttg ctatgataag aactaaatgc ggattaaaat caagttttat
    12241 aaagcctaaa acaaaggctt cgcttgccaa aggcaatagt gtgcttgaaa gaaaacacac
    12301 tataaaaagc cctaaataac ttatattgct atataaaaaa tcaaacattt tagattatga
    12361 tttttgtata tttttaagtt ccaaatccaa ataatatcct gtataagaat gtgttttttt
    12421 atgttcttta gcgacttttt ccacacttcc tgtactaatg accttgcctc ctttaactcc
    12481 tccttcaggc cccatatcga tgatataatc agcattttta atcacatcta aattatgttc
    12541 tattacaaaa acagaatttt taagatcaac taaatgttgt aaaaccaaga taagcttatt
    12601 aacatcttca aaatgaagtc ctgtggtagg ctcatcaagt atataaaggg tttttcctgt
    12661 atcgctacgg cttaattctt tagcaagctt tattctttgt gcttcacctc cacttaaggt
    12721 tgtagcattt tgtcctaggg taagatagtc taagcccact tttaccagag tgtctaattt
    12781 ttgcttgatt tttggtacag cagcaaaaaa ttcactcgct tctaaaacgc tcatatttag
    12841 aatttcgctg atatttttac ctttgtattt aatctctaat gtggcatcat tatagcgttt
    12901 accatggcaa gtatcacaca caaccataac atcaggtaaa aaatgcattt ctattttgat
    12961 ttctccatct ccactacatt tttcgcatct tccaccttta acattgaaag aaaagcgtcc
    13021 cgctttatag ccacgcattt tagcttcttt agtagcagca aagagattac ggatttcatc
    13081 catggtacct gtataagtgg caggattgga gcgtggtgta cgacctatag ggctttgatc
    13141 aagataaatg actttgtcaa gcttttcaag tccttctatt tttactccgc caagtttttt
    13201 cactttttta gcgcggttta attcttcttg tgcaaaagga agtaaagttt gaagtatgag
    13261 agaacttttt ccagaacctg aaactccagt tatagcaact aaattttgca aaggaaattt
    13321 cacgcttaaa ttgtaaatat tattaatatt tacattttta agttctagcc attctttttg
    13381 cgctctgttt tgaagctgtg aaatttgttt tttgccattc atgtaaagtg cagtttgact
    13441 tttgcttttt aaaagttctt tataagttcc actaaataca acttcacctc caaattttcc
    13501 ggcttttggg ccaatatcta caataaaatc tgcctcttct atagtcattt tatcatgttc
    13561 aacgacgatt agggtattac ccttttgttg caaattcctt aaagttttaa taagtttttc
    13621 tgtatctctt tcgtgaagtc caatactagg ctcatctaaa acatacatta ccccgcttaa
    13681 accactgcca atttgtgagg ctatacggat tctttgtgct tcacctccac tgatcgttct
    13741 tgcatcacgc cctaaagaca gatagcctag tcctacatca tataaaaaga aaagtctttc
    13801 gttaatctct tttaatatag gcttgcaaat aagtttttgt tgctcactca aataagagaa
    13861 ttttttttca tcagcaaaaa aggcagtgct atcttctatg ctcatatcta aaatttcacc
    13921 taaacctttt ttggctactt ttacagccaa actttcaggt tttaaacggt gtccgccaca
    13981 gtctttgcaa attttttcac tcatatattc acccaaatct ttttcatctt ttagcatttc
    14041 gtaagccatt ttaaccacgc cttcaaaagt gcgttttaag cgatttcttt tccaaaaaaa
    14101 ttctatggtt ttggcattgc cgtacaatac aaggcgtttt tgctcttcac tcagttctac
    14161 aaaaggtatt ttgatagaaa tttcgttttg ttcacaaaaa gcgattagga atttataata
    14221 ataactttta ttaaagccat acatgatttt aaccgcacca ttttcaaggc ttaagttttc
    14281 atcaatgatt tttttcatat ctaaagtata gcgtatccca agtccatcac aagcttcgca
    14341 tgcccctttt ggagagttga aagaaaagct taaaggttca agcggaataa aagaaatttt
    14401 acaatcaaaa caagccgagt gttcgctaaa atgatagtgt ttgttaagat ttatttcttc
    14461 atgatttaaa acttctattt ctatttctcc aaagctttct tgcaagcctt tttctatatc
    14521 atttgcaagg cgagaaagta aattttcttg aatttcaagg cggtctataa ctagtttgat
    14581 tgtatgtttt ttagttttag caagttcaat ttcttcatca agtcttacta aaactccatc
    14641 aatttgggct cttacatagc ctttattacg taaattctca agtaaatcca cataagttcc
    14701 ctttttttca cgtatgagtg gggcgtagat gatgattttt gcaccttgtg gaaattttaa
    14761 aatttcactg actatatcgc ttgcactcat tgatgaaatt tttttcccac attggtggca
    14821 gtgttgaatg cctactcttg catataaaag tcttagataa tcataaattt cagtgatggt
    14881 tcctacagta gagcgtggat ttttagaagt agttttttgg tctatggcaa tagatggagt
    14941 taagccttcg attttatcaa catcaggctt acctacttta tctaaaaatt gtctagcata
    15001 agcacttaaa ctttctatat aacggcgttg tccttcagca taaagagtgc caaaggcaag
    15061 agttgatttt ccacttccac taagtcctgt aaaaacaatg agtttgtttt taggaatttc
    15121 aaggtggata tttttaagat tattttctcg tgcgccgatg atttttatag tattgttcat
    15181 ggtttttcct aaacattatt aatgaattta agattttaac ataataatat taaaaaaact
    15241 tggataaatt cgagttaaaa atttataaga tttaatttat taagtaagga gtgagtggtt
    15301 ccaagtattg atagggcata tacgcaaagt aaaatttttc tatgagccga aatatgcatt
    15361 ttttctatga ttttaattcc tataaaaact ccaaccatgg aagctatgcc tactagtatt
    15421 cccttatgaa taacttcaga gtctataact tcagagtttg aaaaagatat aattcctgaa
    15481 actgaagcaa aaataacaaa aaacaaagac aaagaaacaa cttttttgct atcgtaacct
    15541 agaaagtaag ctaaaattgg agcaatcaaa agcccaccgc caattcccaa agaaatagca
    15601 aaaataccag taaaagctcc agcgataaat aaaattacat tttttaccca aacacttctt
    15661 tgatttttta caatatttcc tttaatttca aaagcatatt taataaaaaa tatgcaactt
    15721 actgtcaaaa atatactagt aagagctaca tcacttaaag cttttaaaag cattccgcta
    15781 aaacttgctc ctataagtcc tccaaaacct atcataatgc catctttgag atttagattt
    15841 tttttcctat aattaatata ggagccaaaa actgctgcaa aaatcatttg caacactgaa
    15901 attccgatag catgatgagc gcttgcccca agtgcaaaca tagaaggaac gataatcata
    15961 cctccaccaa tgccaaaaag tccagaagtg atacctgaaa tgattcctat gattaaataa
    16021 ggtaaatctg cgatttccat agcttttcct aaaagatatt aaatatttaa aatacgaaat
    16081 gattttatct tattaaacta agtattatct tagtttttta taaaatcata gaatactttt
    16141 tgacaacttt aagcattgta aaagtgtttc gaaaatatca tgaaatatat taagatttta
    16201 taaattttat tttaaattta aagcaaaa
//
LOCUS       DAPWAA010000035        16173 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.035, whole genome shotgun sequence.
ACCESSION   DAPWAA010000035 DAPWAA010000000
VERSION     DAPWAA010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16173
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.035"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            29..607
                     /locus_tag="RTF91_001071"
     CDS             29..607
                     /locus_tag="RTF91_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943956.1"
                     /translation="MGLKDNLKAVKNELNTEEHFIENFIKGERFIRKYKFYISAIVII
                     LVAWFVGNFIISKINDYKIKEANEIYANLLQDPSDKNLSEKLKNKNINLYTIFLLKEN
                     INDFNNTTLQSELKQIYSNAQTNTLLKNIIALSLGDKSIFLKNYDKLLEAYRLLEQNK
                     IEEANVLLSQIKENSSLSQIAKNLKHYQGITQ"
     gene            604..1602
                     /locus_tag="RTF91_001072"
     CDS             604..1602
                     /locus_tag="RTF91_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943957.1"
                     /translation="MKKTFLMLLCLIFLCACGTKRQYFEPKQTDGDLNHNGNLKSKIV
                     DWNLVSAKLSNNTVILKNNISIDKFKLPKNYMLLTYQDGEYFTADNNGNLKIFDNSYN
                     EIYSFQFDASIVGVASNGDDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANP
                     IFLDNIIVYPTLDGKILILSRNNLQIIKDVVISAENFFNNVIHLSVIGDKLIAATAKK
                     IIVVSPARTLYLDADIKDVALSDGGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFVKS
                     NVYNNSLYIFEKTGYLIKMNLNLDNVQVFKLSEAVDKISFMGSGKFYYGDKILDLL"
     gene            1592..1903
                     /locus_tag="RTF91_001073"
                     /pseudo
     CDS             1592..1903
                     /locus_tag="RTF91_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343832.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tram-like protein"
     gene            1869..2498
                     /locus_tag="RTF91_001074"
     CDS             1869..2498
                     /locus_tag="RTF91_001074"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HDZ4943958.1"
                     /translation="MLLCDIGNSNANFLDNNKYFTLSIDQFLEFKNEQKIFYINVNEH
                     LKEYLKNQKNFINLEPYFLFDTIYQGLGIDRIAACYTIEDGVVVDAGSAITIDIISNS
                     IHLGGFILPGIANYKKIYSYISPRLKSEFNTQVSLDAFPQKTMDALSYGVFKGIYLLI
                     KDAAQNKKLYFTGGDGQFLANYFDHAIYDKLLIFRGMKKIIKENPNLLY"
     gene            2617..3963
                     /locus_tag="RTF91_001075"
     CDS             2617..3963
                     /locus_tag="RTF91_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDZ4943959.1"
                     /translation="MDQQEFDVLVIGAGISGAALFYELARYTNIKNIALIEKYNTAAT
                     LNSKGTSNSQTIHCGDIETNYTLEKAQKVKRTADMIVKYGLMQNAQNNFMFSHQKMAL
                     AVGEIECDYMKKRYEEFKELYPYIKFFDKAKIKEIEPKVVLGEDCNQDRPENICAMGV
                     ESGETFTTIDFGKMSINLIEQAQKQNKNTFVAFNQEIIHIEKKDDIFILKTSNHQEYH
                     AKSVVVNAGAHSLYLAHKMNLGTDKSCWPIAGSFYLTKQKLLNGKVYMVQNPKLPFAA
                     LHGDPDLFANMNTRFGPTALAIPKLERYHGLKSVPEFFEALKLDKTVLRVTFNMLKDT
                     TIRNYIIYNYLFELPFIDKSLFVKDAKKIVPSLKTSDIYYAKGFGGIRPQVIDKTKGE
                     LMLGEASITETPGIIFNMTPSPGATSCLGNAERDAKLICDYLGMQFNEDQFSSELL"
     gene            4012..5454
                     /gene="pyk"
                     /locus_tag="RTF91_001076"
     CDS             4012..5454
                     /gene="pyk"
                     /locus_tag="RTF91_001076"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDZ4943960.1"
                     /translation="MLKKTKIVATVGPASEKEEILRQMIINGVNVFRLNFSHGTHEYH
                     KKNLDAIRRVAKELHTRIGILQDISGPKIRTGELKEPFELKKGDKLDFYRETILGKKI
                     TQNHYKISINQKSILDMLKIDEYIYLYDGSIRAKVVNIDNQKIETIIENDGFLNSNKG
                     INFPNTKINIDIITQKDKNDLLWGIKNEVDFLAISFVQNAHDIDEVREILTRNNAKIS
                     IFAKIEKFDAVENIDEIIKSSDGIMVARGDLGIEVPYYKVPNIQKEIIQKANNASKPV
                     ITATQMLFSLTKIKTATRAEISDVANAVLDGTDAVMLSEESAVGIDPANAVDIMCQTI
                     IETEKRYPYNKFNDFNDLDNTDKIMRSSAHLATDLSADAIFSLTSSGKSAIKIARYRP
                     NIEIIAVGHSEKTLNSLSIVWGVNPAILVNKSNELTELLKDSVKSSVEKGYIDENKCY
                     LLTAGFPTGVEGTSNLIRILNKEQIAYYLQ"
     gene            5551..6186
                     /locus_tag="RTF91_001077"
     CDS             5551..6186
                     /locus_tag="RTF91_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943961.1"
                     /translation="MQVNTFSNIASMTQTQVSNKKANDAKENTKDKNVQSADSSKDID
                     KNTLEKLNALGGKGITQIYLIQFQQQTMNTVIGSSNAQAGLSSLLNGTNLDTAKSILA
                     NIDFASLGYSGKNPLHMNANELQQLVSENGFFGVENTANRIADFVIKGGGDDVEKLKK
                     GLEGMKKGFEQAEKMWGGKLPQISQDTIDTALKKVSDRINELGGKTLNLQA"
     gene            complement(6217..8682)
                     /gene="pflB"
                     /locus_tag="RTF91_001078"
     CDS             complement(6217..8682)
                     /gene="pflB"
                     /locus_tag="RTF91_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility protein PflB"
                     /protein_id="HDZ4943962.1"
                     /translation="MAEQEDIILEKPEDSLNQQRLDESLGEFKGQEGQAPEDEEFASL
                     PEELPQENSDSGFKFTRESAPEDVSTFEEVQSQEEPTPWYKDRKFMSLVGLSLGIICI
                     LVFTLFYLTFSEGKIKPDIIASKPLEQPVVMPDESYKYNDMQRIDGMIQKANALYLKG
                     EVEQALKVYEQVAVYNESLSNYNLGVSQMNENKFQEAFESFKKAIANGENQSVSAINA
                     AVCALKLNDKEKFRYYIDLAQVYLPKEGKSKLYDYYLSLINYYKGYYPEALQMLQRTD
                     VEPYSDVAKYLSAKIYAKMDFDSKAIQQLNSQGNFESSLSLGLLYARIGEYAKAKIAL
                     STAMKIERDFNQSLAALTLVDIKTGNYQDMLTRLQNSYDDDKDKYKILDFYKIQVGLN
                     KDLFNIALAQSSFSKDLLKKQKDQFDLLFYFAPYQVFDSKQAALYIKKANVMDFVDDS
                     ADAGIYLNTSKALSSTNVKIANIINYALNQKLRLANQEFQKLINDYPEHSILHYNLAL
                     TYAQMQNYELAYKHFSSSYHLNPKNYLAGAFAMFCAKLIDIDTTKLYNEILDNIAADS
                     NFKANMQKSMLFLVNNNYISMLPYLDESKKDTPLSLIFEAIIAKNNNLNNQVDVKIAK
                     LRSELPGDILANILYFNSLNSNLNIKEYAQNAQIHFKNLKFDYRSVFGGPNIAREFYI
                     NLMHIAGILNLERQKFKELINVSETKDEGVLQTLAYLDIFAQQYEEAYALYNSLIDDY
                     GAKDSKTLFLAAVAAVGANNPNSAIALLQLSKLTDRNNKESKAALGMLYQEVKNYEAA
                     ISQYKTLPNNFKSEFFTFDINNN"
     gene            complement(8692..9927)
                     /gene="serS"
                     /locus_tag="RTF91_001079"
     CDS             complement(8692..9927)
                     /gene="serS"
                     /locus_tag="RTF91_001079"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDZ4943963.1"
                     /translation="MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFGSLKKEKTA
                     LEEFQAFQNKFSKELTTAEDKENLKIKLSENKIKINEQNTKVNALENELEEIAHAIPN
                     IPDECVPVGEDEDENVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFC
                     VLKNEGALLSRALVNYMIDFNRSRGFDFVNVPFLVNGATMFGTGQLPKFKEDMYKVDD
                     EDLYLISTSEIPVTNLYSGEILASEILPIKMTCYSACFRKEAGSAGRDTRGIIRQHQF
                     EKVELVSITKPEQSDSVFNEMLECASDLLSSLGLSHRHLMLCTGDLGFSATKTVDLEV
                     WLPGQNKYREISSVSNCRDFQARRAKIRYKNKQGKNELVHTLNGSSLAVGRTLVAIME
                     NYQDKEGKIRIPDVLRKYF"
     gene            complement(9938..10897)
                     /gene="trpS"
                     /locus_tag="RTF91_001080"
     CDS             complement(9938..10897)
                     /gene="trpS"
                     /locus_tag="RTF91_001080"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDZ4943964.1"
                     /translation="MRVLTGLQPSGDLHIGNYFGAIKQMVDAQEKNQMFMFIANYHAM
                     TSSQDGEKLKQNSLKAAAAFLSLGIDPKKSVFWLQSDVKEVMELYWILSQFTPMGLLE
                     RAHSYKDKVAKGLSASHGLFSYPVLMAADILLFDTQIVPVGKDQIQHVEIARDIALKV
                     NNEWGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKALKKQISSIVTDS
                     TALEDPKDHENCSVFKIAKLFLDEVGQKELQMRYEKGGEGYGHFKMYLNDLVNAYFKE
                     AREKYNELLEKPLHLKEILDFGATKARKIAQEKMQKIYEKIGL"
     gene            complement(10894..11391)
                     /locus_tag="RTF91_001081"
     CDS             complement(10894..11391)
                     /locus_tag="RTF91_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HDZ4943965.1"
                     /translation="MMRVKNIVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFN
                     QKISEIFAQRGEIFFREQEQKMADFFITCQKACIATGGGFVHVSNLEKTGFCIYLKAS
                     FEYLKKRLDENEISKRPLFYDEIKAKKLYNERLSKYEQKANFILNIENKNMDELLGEI
                     KKVIE"
     gene            complement(11378..12760)
                     /gene="der"
                     /locus_tag="RTF91_001082"
     CDS             complement(11378..12760)
                     /gene="der"
                     /locus_tag="RTF91_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDZ4943966.1"
                     /translation="MQSIILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTEI
                     FIHSKKAILIDSGGLDESDELFKNVKKNTLKVVKESDIILYLVDGKLAPDDEDRQFFY
                     SLKKLGKPIALVINKVDNKKDEERAWEFANFGVKEIFNLSVTHNVGLDELYDWLEKFL
                     HEEFLIPDEEENLEDFLEHYEEGKEFQFKEVDQNHIRIGIVGRVNVGKSSLLNALVKQ
                     ERSVVSSIAGTTIDPVNESIVHKDKVIEFVDTAGIRKRGKIQGLERFALNRTEKILSH
                     SQIALLVLDAHEGFNELDERIAGLVAKHYLGVIIVLNKWDKSKMDFDKTVKELRLDRF
                     KFLAYAPVISVSALNGKRVHVLLDKILQIFENFTQKIQTSKLNTLIENATKAHPLPHD
                     YGKLVKIYYAVQYDLAPPKIALIMNRPKALHFSYKRYLQNQIRKEFNFEGVPLVIASR
                     KKGSKENDES"
     gene            12875..13807
                     /locus_tag="RTF91_001083"
     CDS             12875..13807
                     /locus_tag="RTF91_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDZ4943967.1"
                     /translation="MLKIIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFR
                     NIIGIFFIIYLLKRSKVHKEGGHFWLLVFRGVAGTLSLYMFFYNVSNITLGGAFAFQK
                     IAPIFITLIAFVIFKENIGIKGWIGILIAFGGVLLIAQPWVNSSNHSGFDLKNSIIGI
                     TSGFLAALALTSVRELRKFYTTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLD
                     FILAPFIMPSLTAWLIIAIMGTLGTIYQIHVTKAYGIAKQAGIVAGVSYLDVVFSMIV
                     GIILGDNLPSAMVFLGIIGIIFGGLILVKNKGKK"
     gene            13813..14625
                     /gene="kdsA"
                     /locus_tag="RTF91_001084"
     CDS             13813..14625
                     /gene="kdsA"
                     /locus_tag="RTF91_001084"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDZ4943968.1"
                     /translation="MKKTILIAGPCVIESKDLVFKIAEQLKNFNENPNIEFYFKSSFD
                     KANRTSINSFRGPGLEEGLRILQSVKNEFGMKILTDIHESNQANPVSEIADVLQIPAF
                     LCRQTDLLVAAAKTKAKVNIKKGQFLNPSDIKYSIKKVLQTRGIEDDGYKVAQKNGVF
                     VAERGASFGYGNLVVDMRSLVIMREFAPVIFDATHSVQMPGAAGGSSGGESEFVEPLA
                     RAAAAVGVDGFFFETHINPCEALCDGSNMLDLIRLKNCVTTLLEIQNIIKEK"
     gene            14626..15090
                     /locus_tag="RTF91_001085"
     CDS             14626..15090
                     /locus_tag="RTF91_001085"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDZ4943969.1"
                     /translation="MNIIEGKLNLDSNTKIAIINARFNHIITDRLVEGAKDAFLRHGG
                     KEENLSLILVPGAFELPYVLKKAIESKKFDAICCVGAVIRGSTPHFDYVSAETTKGIA
                     NVSLNHNIPVSFGVLTTDTIEQAIERAGSKAGNKGFEAMTTVIEMLNLNKEL"
     gene            15090..15488
                     /gene="nusB"
                     /locus_tag="RTF91_001086"
     CDS             15090..15488
                     /gene="nusB"
                     /locus_tag="RTF91_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDZ4943970.1"
                     /translation="MATRHQVRQSVISLLYAFELNSQNDVFIDEILDEKKIRNEQKKF
                     TLNLYHGILDNLSNIDETLNSFLNDNQITALGHVERAILRLGAYELLFSDTPSAIVIN
                     EAIELAKELANDNSPKFINGVLDALIKAKK"
     gene            15485..16165
                     /gene="pyrF"
                     /locus_tag="RTF91_001087"
     CDS             15485..16165
                     /gene="pyrF"
                     /locus_tag="RTF91_001087"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDZ4943971.1"
                     /translation="MKLCVALDLSTKEECLKLAKELKNLDIWLKVGLRAYLRDGFKFI
                     EELKKVDDFKIFLDLKIYDIPNTMADACEEISKLGVDMINIHASAGKIAMQEVMTRLN
                     KLPKRPLVLAVSALTSFDEENFFSIYKQKIKEAVIEFSKISYENGLNGMVCSVFESKI
                     IKENTQKNFLTLTPGIRPFGEKNDDQKRVADLTMAKENLSDFIVVGRPIYKDNNPRKI
                     CEKILQEI"
BASE COUNT         5822 a         2544 c         2313 g         5494 t
ORIGIN      
        1 aataaaaata ttttttcaag gataaatttt gggattaaaa gataatttaa aagctgttaa
       61 aaatgagctt aacacagaag aacattttat agaaaatttt atcaaaggag aaagatttat
      121 acgtaaatat aaattttata tatccgctat tgtaataatt ttagttgctt ggtttgttgg
      181 aaattttata atctcaaaaa taaacgatta taaaataaaa gaagctaatg agatttacgc
      241 taacctatta caagatccta gtgataaaaa tctttcagaa aaacttaaaa acaaaaatat
      301 taatctttac actatctttt tattaaaaga aaatattaat gattttaata atacaactct
      361 tcaaagtgaa ctaaagcaaa tttatagcaa tgctcaaaca aacactttgc ttaaaaatat
      421 tattgcatta tctttaggag ataaatcgat atttttaaaa aactatgata aattattaga
      481 agcctataga cttttagagc aaaataaaat cgaagaagct aatgttttac tttctcagat
      541 aaaagaaaat tcgagtttaa gtcaaatagc taaaaatctc aaacattatc aaggtattac
      601 acaatgaaaa aaacattttt aatgctactt tgtttaatat ttctatgtgc ttgtggcacc
      661 aaaagacaat attttgagcc aaaacaaacc gatggagatt taaaccataa tggtaattta
      721 aaaagtaaaa tcgttgattg gaatctagtt tctgcaaaac ttagcaataa cactgtaatc
      781 ttaaaaaata atatttccat agataagttt aaacttccta aaaattatat gcttttaact
      841 taccaagatg gggaatattt tactgcggat aacaatggaa atttaaaaat ttttgacaat
      901 tcttataatg aaatttatag ctttcaattt gacgctagca ttgtaggagt agcttctaat
      961 ggagatgatc tagctcttgt gcttgcaaat aatactatag ttcttgccaa tcgttctttg
     1021 ggaattaaat ttagccaaac cctaacttcg gctccagctc aagatagtcg cactgctaat
     1081 cctatatttt tggataatat catcgtatat ccaacactag atggtaaaat tttaattctt
     1141 tcaagaaaca atcttcaaat cattaaagat gtagttattt cagcggaaaa ttttttcaat
     1201 aatgtgatcc atctaagcgt aattggagat aaacttatag cagcaacagc taaaaaaatt
     1261 attgttgtaa gccctgctag aactctttat cttgatgctg atataaaaga tgtcgcactt
     1321 agtgatggtg gtatttttat attagaaaaa gacggcacta ttattaaaac ggattataac
     1381 ctgagaaaaa ttgcggaaaa aaaatttgaa tttgctattt ttgtaaaaag taatgtatat
     1441 aataattctt tatatatttt tgaaaaaaca gggtatctta tcaaaatgaa tctaaatttg
     1501 gataatgtgc aagtgtttaa actttcagaa gctgttgata aaatttcttt tatgggaagc
     1561 ggtaaatttt attatggaga taaaatttta gatctattat aataaaattt taaaacaaat
     1621 aataaaggct ttaaaattaa atttgaaacc tttattattt aagcgtgtta atcagaagaa
     1681 agttatcttt gtgctaaaga tcagaataac atttttttta ttacagggaa aacaaatttt
     1741 taatgaaaga taccttattt ttagaaaatc tagcacggca aacgaataca aataacaaat
     1801 attttttagc atggcttccc tttgctctaa agcaaaaaat catctaaaaa tgaaaggatt
     1861 taacatctat gttactctgc gatattggga attcaaatgc taatttccta gataataata
     1921 aatatttcac tcttagcata gatcaatttt tagaatttaa aaatgaacaa aaaatttttt
     1981 atatcaatgt caacgaacat cttaaagaat atttaaaaaa tcaaaaaaat tttattaacc
     2041 ttgagcctta ttttttattt gatacgattt atcaaggatt aggaattgat cgtatagcag
     2101 cttgttatac tattgaagat ggggttgttg tggatgcagg tagtgctatt acaattgata
     2161 ttatctccaa ctctatacat cttggtggtt ttatcttgcc gggtattgca aattataaaa
     2221 aaatttatag ctatatttca ccacgattaa aaagcgaatt taatactcaa gttagtcttg
     2281 atgcattccc acaaaaaaca atggatgctt taagttatgg tgtttttaaa ggaatctatc
     2341 tgctaataaa agatgctgct caaaacaaaa agctttattt tactggtgga gatgggcaat
     2401 ttttagcaaa ctactttgat cacgcaatct atgataaact tttaatattt cgaggaatga
     2461 aaaaaatcat aaaagaaaat cctaatttac tttattaaaa atgttacaaa aattctcatt
     2521 gatattaaac tccaatgaaa tttagctttt cgtaaaacaa attcaattaa acttacattt
     2581 acaagaaagt ttattaaaat aaaataagga aaaacaatgg accaacaaga atttgatgtg
     2641 cttgtcatcg gagctggaat ttcaggagca gcattatttt acgagcttgc aagatataca
     2701 aatattaaaa atattgcttt aatagaaaaa tataatacag ctgcaacatt aaattctaaa
     2761 ggaactagca attctcaaac cattcattgt ggagatatcg aaaccaatta tactctagaa
     2821 aaagcacaaa aagtaaaaag aacagctgat atgatagtta aatatggact catgcaaaat
     2881 gcacaaaata atttcatgtt ttctcatcaa aaaatggctc tagctgttgg agaaatagaa
     2941 tgtgattata tgaaaaaacg ctatgaggaa tttaaagaac tttatcctta tataaaattt
     3001 ttcgataaag caaaaatcaa agaaattgag cctaaggttg ttttaggaga agattgcaat
     3061 caggacagac ctgaaaatat ctgtgctatg ggtgttgaaa gtggcgaaac ttttacaact
     3121 atagattttg gaaaaatgag tataaatcta atagaacaag ctcaaaaaca aaataaaaac
     3181 acttttgttg cttttaatca agaaattatt cacatagaaa aaaaagatga tatttttata
     3241 ttaaaaacct caaatcatca agaataccat gccaaaagtg tagttgttaa tgccggagca
     3301 cactctttat atttggcaca taaaatgaat ttaggtacag ataaatcttg ctggcctatt
     3361 gcaggaagtt tttatttaac caaacaaaaa cttttaaacg gtaaagttta tatggtgcaa
     3421 aatcctaaac ttccatttgc agctcttcat ggagatcctg atttgtttgc caatatgaat
     3481 actcgctttg gacctactgc acttgctatc ccaaagctag aacgttatca cggtttaaaa
     3541 tcagttccag aattttttga agcgctaaaa cttgataaaa ctgttttaag agtaactttt
     3601 aatatgttga aagatacgac aattagaaat tacatcattt ataattatct ttttgagcta
     3661 ccttttattg ataaaagttt atttgtcaaa gatgctaaaa aaatagttcc aagtcttaaa
     3721 acaagtgata tttattacgc aaaaggtttt ggtggtataa gaccacaagt tattgataaa
     3781 accaaaggag aattaatgtt aggtgaagca agcatcacag aaactcctgg tattattttc
     3841 aatatgactc caagtcctgg agcaacaagt tgtttaggaa atgctgaaag agatgcaaag
     3901 cttatatgtg attatttagg aatgcaattt aacgaagatc aattttcttc agaattattg
     3961 taatcatttt gtttctatat tttagctaca ataatttcaa aaggagttac catgcttaaa
     4021 aaaacaaaaa ttgtagccac agtaggtcca gcaagcgaaa aagaagaaat tctacgccaa
     4081 atgattatca atggtgtaaa tgtcttccgt ttaaattttt ctcatggaac gcatgaatat
     4141 cataaaaaaa acttagatgc cataagaaga gtagccaaag aattacacac tcgtattgga
     4201 attttgcaag atattagtgg ccctaaaatt cgcacaggtg aacttaaaga accctttgaa
     4261 ttaaaaaagg gtgacaaact tgatttttat cgtgaaacaa ttttagggaa aaagattact
     4321 caaaatcact ataaaatcag cattaatcaa aaatctattt tagatatgtt aaaaattgat
     4381 gaatacattt acctatatga tggatcaatt cgtgctaaag tagtaaatat agacaatcaa
     4441 aaaattgaaa ctatcataga aaatgatggt tttttaaatt caaacaaagg cattaacttt
     4501 ccaaatacta aaattaatat tgatattatt acacaaaaag ataaaaatga tttgctttgg
     4561 ggtataaaaa atgaagtaga ttttttagca atatcttttg tgcaaaacgc acacgatatt
     4621 gatgaagtcc gtgaaatttt aacacgaaat aacgcaaaaa tatctatttt tgcaaaaatt
     4681 gaaaaatttg atgcggtaga aaatattgat gaaatcatta aatctagtga tggtataatg
     4741 gttgcaagag gagatttagg tattgaagta ccttattata aagttcctaa tatccaaaaa
     4801 gaaatcatac aaaaagcaaa taatgcttct aaacctgtta ttactgcaac tcagatgctt
     4861 ttttcgttaa ccaaaatcaa aaccgctaca agagctgaaa tttcagatgt tgcaaatgct
     4921 gttttagatg gaacagatgc ggtaatgcta agtgaagaaa gtgctgttgg tatagatcct
     4981 gcaaatgccg ttgatataat gtgtcaaact ataatagaaa cagaaaaacg ctatccatat
     5041 aacaaattta atgattttaa tgatttagac aatacagata aaatcatgcg ttcttcagct
     5101 catcttgcaa cagatcttag tgctgatgct attttttctt taacaagtag cggaaaatct
     5161 gcaattaaaa tcgcaagata tcgtccaaat atagaaatta tagccgtagg acattctgaa
     5221 aaaaccttaa actctttaag tatagtttgg ggagttaatc ctgcaatctt agttaacaaa
     5281 agcaatgaac ttacagaatt attaaaagac tccgtaaaat caagcgttga aaaaggttat
     5341 atagatgaaa ataaatgcta tcttttaact gcaggctttc caacaggagt agaaggtact
     5401 agcaatctta ttcgtattct taacaaagaa caaattgctt attatttaca gtaaaacatt
     5461 aaatttctta aaaacaagga atttaatatc cttgtaaatt ttttaaatca aaagtcgata
     5521 taaattaaag cctcacacaa aggagcaaat atgcaagtga atactttttc aaatatcgct
     5581 agcatgacac aaacacaagt tagcaataaa aaggcaaatg atgctaaaga aaacacaaaa
     5641 gacaaaaatg ttcaaagtgc tgattctagc aaggatatag ataaaaatac ccttgaaaaa
     5701 ttaaatgcac ttggcggaaa aggcattacg caaatttacc taattcagtt tcaacaacaa
     5761 acaatgaata ctgtaatagg ttcaagcaat gctcaagccg gactaagtag tcttttaaat
     5821 ggtactaatt tagatactgc aaaatccata cttgcaaata ttgattttgc atctttaggt
     5881 tacagtggca aaaatccact tcatatgaat gccaatgaac ttcaacaact tgtaagtgaa
     5941 aatggttttt ttggggtgga aaatacagcc aatcgcatcg cagattttgt cattaaaggc
     6001 ggtggcgatg atgttgaaaa attaaaaaaa ggtcttgaag gtatgaaaaa aggatttgag
     6061 caagcggaaa aaatgtgggg tggaaaactt cctcaaatca gccaagatac aatagataca
     6121 gcacttaaaa aagtcagtga tcgtatcaat gaactaggtg gaaaaaccct aaatcttcaa
     6181 gcttaattaa aaatgcttag aattttctaa gcatttttaa ttgttattaa tatcaaaagt
     6241 aaaaaattca cttttaaaat tattaggtag agttttatat tgagatattg cagcttcata
     6301 gttctttact tcttgatata gcataccaag agctgcttta ctttctttat tatttctatc
     6361 tgtaagttta gagagctgca aaagtgctat agccgaattt ggattatttg cacctacggc
     6421 cgctactgct gccaaaaata aagttttact atcttttgct ccataatcat caattaaaga
     6481 attataaagt gcataagctt cctcatattg ctgtgcaaaa atatccaaat aagctaaagt
     6541 ttgcaaaacc ccctcatctt ttgtttctga aacattaatc aactctttaa atttttgtct
     6601 ttccaaattt aaaatccctg caatatgcat taaattaata taaaattctc tagcaatatt
     6661 tggcccgcca aaaacactac gataatcaaa ttttaaattt ttaaaatgaa tttgagcatt
     6721 ttgagcatat tctttaatat ttaaattaga atttaaagaa ttaaaataca aaatatttgc
     6781 caaaatgtcg ccaggcaact ccgaacgcaa tttagcaatt ttcacatcta cttgattgtt
     6841 aaggttatta tttttagcaa taatagcttc aaaaatcaaa ctcaaaggtg tatctttttt
     6901 tgattcatct aaataaggaa gcatagaaat ataattatta ttaactaaaa ataacatact
     6961 tttttgcata ttggctttaa aattagaatc agcagctata ttatcaagaa tttcattata
     7021 aagtttagtt gtgtcaatat caattaattt tgcacaaaac atagcaaaag cgcccgctaa
     7081 ataattttta ggattaagat ggtacgaact tgaaaaatgc ttataagcaa gctcataatt
     7141 ttgcatttga gcgtaggtta aagccaaatt atagtgtaaa atactatgct ctgggtaatc
     7201 attgataagt ttttgaaatt cttgattagc aagacgcaac ttctgattta atgcataatt
     7261 gataatattg gcaattttta cattagtaga tgaaagggct ttacttgtat taagataaat
     7321 tccagcatca gcactatcat ctacaaaatc cataacatta gcttttttaa tatataaagc
     7381 agcctgtttg ctgtcaaaaa cttgataagg tgcaaaatag aaaagcaagt caaattgatc
     7441 tttttgtttt tttaataaat cttttgaaaa agaactttga gcaagtgcta tattgaaaag
     7501 atctttattt aaaccaactt gaattttata aaaatctaaa attttatact tatctttatc
     7561 atcatcataa gaattttgca agcgtgttaa catatcttga taatttcctg ttttaatatc
     7621 aaccaaagtt aaagccgcca aactctgatt aaaatctctt tcaattttca tcgccgtgct
     7681 taaagcaatt ttagctttag catattctcc tattctagca tataaaagac ctaaagacaa
     7741 actggattca aaattacctt gagaatttaa ttgctgtata gccttagaat caaaatccat
     7801 ttttgcataa attttagcag ataaatactt tgctacatca gaatacggct ctacatccgt
     7861 tctttgtaac atttgcaaag cctcaggata ataaccttta tagtaattaa ttaagcttaa
     7921 ataataatca tataattttg attttccctc ttttggaaga tacacttgag ctaaatcaat
     7981 ataatatcta aatttttctt tatcattaag ctttaaagcg caaacagctg cattgatagc
     8041 agatacgctt tgattttcgc cattagctat agctttttta aaactttcaa aagcttcttg
     8101 aaatttattc tcattcattt gagaaacacc taaattataa ttggataaag attcattata
     8161 tacagcaact tgctcataaa cttttaaagc ttgttcaact tcgcctttta aatataaagc
     8221 atttgctttt tggatcatac cgtcaattct ttgcatatca ttatatttat atgattcatc
     8281 aggcataaca acaggttgtt ctaaaggctt agaagctata atatctggtt taatttttcc
     8341 ttcactaaaa gttaaataaa aaagtgtaaa aactaaaata caaataatcc ctaaagatag
     8401 acccacaagg gacataaact tacgatcttt ataccaaggg gtaggttctt cttggctttg
     8461 aacttcttca aaagttgata catcttcagg tgcactttct cttgtaaatt taaaaccact
     8521 atcactattt tcttgaggta attcttctgg caatgatgca aactcttcat cttctggagc
     8581 ttgcccctct tgtcccttaa attctcctaa actctcatca agtctttgct gatttaagct
     8641 atcctcaggt ttttctagta ttatatcttc ttgttcagcc atctatactc tttaaaaata
     8701 ttttctcaaa acatcaggaa tgcgaatttt tccctcttta tcttggtaat tttccataat
     8761 cgctactaaa gttcttccta cagccaaaga agagccgttt aaagtatgga caagttcatt
     8821 ttttccttgt ttatttttat aacgaatctt agcacgtctt gcttgaaaat cacgacaatt
     8881 tgaaacagag ctaatttcac gatatttatt ttgccctgga agccatactt caagatccac
     8941 agtttttgtt gcactaaaac ccaaatctcc cgtacaaagc atcaaatgtc tatgtgataa
     9001 tcctaaagaa ctaagcaaat cacttgcaca ctcaagcatt tcattaaaca cactatcact
     9061 ttgttcaggt ttagtaatgc ttacaagctc tactttttca aactgatgct gtcttataat
     9121 accccttgta tcacgtcctg cactacccgc ttcttttcta aaacaagcac tataacaagt
     9181 catttttata ggcaaaatct cgctagctaa aatttcgcca ctataaagat tggtcacagg
     9241 aatttcagaa gttgaaatca aatacaaatc ctcatcatct accttataca tgtcttcttt
     9301 aaattttggc aattgccctg ttccaaacat agtagcacca ttcaccaaaa aaggtacatt
     9361 tacaaaatca aatccacgac ttctattaaa atctatcata taatttacca aagcacgact
     9421 taataaagcc ccttcatttt taagcacaca aaaacgactt tgtgaaattt tcactccacg
     9481 cacgaaatca agccaattta aactctcacc caattcaaaa tgttcttttg gagtaaaatc
     9541 aaaactaggt ggatttaaaa cctttttaag ttctacattt tcatcttcat cttctcccac
     9601 aggcacgcat tcatcaggga tatttggaat agcatgagca atttcttcaa gctcattttc
     9661 tagggcattt accttagtat tttgttcatt aattttgatt ttattttcac ttaactttat
     9721 ctttaaattt tctttatctt cggctgttgt aagctctttg ctaaatttat tttgaaaagc
     9781 ttgaaattcc tccaaagctg ttttttcctt ttttaaactt ccaaaaagtt cggcaagttt
     9841 ttttaagata ttttcatcaa cttttttatt ttttaacttt ttagctactt catcaaaatt
     9901 attttgtaaa ttttttaaat ctagcatttt ctactcccta aagtccgatt ttttcataaa
     9961 ttttttgcat tttttcttga gcgatttttc ttgcctttgt cgcaccaaaa tccaaaattt
    10021 cttttaaatg caaaggtttt tccaaaagtt cattatattt ttctctagct tctttaaaat
    10081 atgcatttac aagatcattt aaatacattt taaaatgccc ataaccttca ccaccttttt
    10141 cataacgcat ttgaagttct ttttgtccta cttcgtctaa aaaaagtttt gcaattttaa
    10201 atacgctgca attttcatga tcttttggat cttctaaagc ggtgctatct gttactatag
    10261 aagaaatttg tttttttaaa gctttttcac tgctaaaaat gtctatagta ttttgataag
    10321 atttactcat ctttgctcca tcagtaccca caaccacagc tacttcttca ttaactctag
    10381 cttctggaag agtgaaaatt tcaccccatt cgttattaac ttttaaggca atatcacgtg
    10441 caatttcaac atgttgaatt tgatcttttc ccacaggaac gatttgtgta tcaaaaagca
    10501 aaatatctgc cgccattaaa acaggataag aaaaaagccc gtgcgaagca ctaagtcctt
    10561 tagcgacttt gtctttatag ctgtgtgcgc gctccaataa gcccatagga gtaaattgtg
    10621 ataaaatcca ataaagctcc atcacttctt ttacatcact ttgtaaccaa aaaacacttt
    10681 tttttggatc tataccaaga cttaaaaaag ccgcagcagc tttaagagaa ttttgcttga
    10741 gtttttctcc atcttgagaa gaagtcatcg catgataatt tgcaataaac ataaacattt
    10801 gatttttttc ttgtgcatct accatttgtt ttatcgcgcc aaaataattg cctatgtgca
    10861 aatctccact tggttgaagc cctgttaata ctctcattct atcacctttt taatctcgcc
    10921 taaaagttca tccatatttt tattttctat atttaaaata aaatttgcct tttgttcata
    10981 cttacttaaa cgctcattat ataacttttt tgctttaatt tcatcataaa acaaaggtct
    11041 tttagaaatt tcattttcat ctaaacgctt ttttagatat tcaaaacttg cttttaaata
    11101 aatgcaaaaa ccagtttttt ctaaatttga aacatggaca aaaccaccac ccgtagcaat
    11161 gcaggctttt tgacaagtga taaaaaaatc agccattttt tgttcttgct ctctaaaaaa
    11221 aatctcacct ctttgtgcaa aaatttcact aattttttga ttaaattttt gttctattaa
    11281 aaaatcacta tctaaaaaaa cgagatctaa atccttagct aaagctcttg ctaaagtact
    11341 ttttccagaa cccataaatc ctataaaaac gatattttta actctcatca ttttctttac
    11401 tacctttttt acgcgaagca atcactaaag gcacaccttc gaaattaaat tcttttctga
    11461 tttgattttg caaataacgc ttataactaa aatgcaaagc tttagggcga ttcataataa
    11521 gggcgatttt tggtggtgct aagtcatatt gcactgcata ataaattttg actaatttcc
    11581 cgtaatcatg tggcaaagga tgtgcttttg ttgcattttc tatcaaggta ttaagcttgg
    11641 aagtttggat tttttgagtg aaattttcaa aaatttgcaa aattttatcc agtaaaacat
    11701 gcactctttt tccgtttaaa gccgacacgc taattacggg tgcataagct agaaatttaa
    11761 aacgatcaag acgcaattct tttacagttt tatcaaaatc cattttactt ttatcccatt
    11821 tatttagcac aataatcaca cctaaataat gcttagctac aagcccagcg atacgttcat
    11881 caagctcatt aaaaccctca tgtgcatcta aaaccaaaag tgctatttga gaatgggata
    11941 aaattttttc cgtacgattt aaagcaaagc gttcaagtcc ttgaatttta cctctttttc
    12001 taatacctgc agtatcaaca aattctatca ccttatcttt atgaactata ctttcattca
    12061 caggatctat ggtagttcct gcaatagaac ttaccacgct tcgttcttgt ttaactaaag
    12121 catttaaaag acttgatttt ccaacattta cacgtcctac aatacctatt cttatatgat
    12181 tttgatctac ttctttaaac tgaaattctt ttccttcttc ataatgctct aaaaaatctt
    12241 ctaaattttc ttcttcatca gggattaaaa actcttcatg taaaaatttt tcaagccaat
    12301 cataaagttc atctaaacct acattatgcg ttactgaaag attaaagatt tcttttacac
    12361 caaaattggc aaattcccaa gccctttctt catctttttt attatccact ttattaatca
    12421 ctaaggctat gggtttacca agttttttta aggaataaaa aaactgccta tcctcatcat
    12481 caggcgctaa ttttccatca accaaataaa gtataatatc actttcttta accactttta
    12541 aagtattttt tttcacattt ttaaaaagct catcactttc atcaagccca ccactatcaa
    12601 taagtatggc tttttttgaa tggataaaaa tttctgtttt atttgtatct ctagttgtac
    12661 ctgaaatatc acttgtaatt gctattcttt gtcttgccat tctattaaaa agacttgatt
    12721 ttccaacatt tggtttgcct ataagtataa tgctttgcat ttttttccta agattaattt
    12781 taatacatat tttaattaaa aaattatata aaatttgcct taatattaag caaaaaagac
    12841 tagaattagg ccagatttta atcaaggaaa aaagatgcta aaaataatca agcataattt
    12901 aggaatttat ttcatgattt tagcatgttt agattttgca cttatgggag cttgtgcaaa
    12961 aattcttagt aaagaaatga gctctattga aattatgttt tttagaaata tcataggaat
    13021 tttttttata atctatcttt taaaacgatc taaagtacat aaagaaggag gacatttttg
    13081 gctcttggta tttcgtggag tagcgggtac actttcactt tacatgtttt tctataatgt
    13141 ctcaaatatt accctaggcg gagcctttgc ttttcaaaaa attgctccca ttttcattac
    13201 tttaatagcc tttgttattt ttaaagaaaa tattggtatc aaaggctgga taggaatttt
    13261 aatagcattt ggcggagtgc ttttaatcgc tcaaccttgg gttaatagtt caaatcattc
    13321 aggctttgat ttgaaaaatt caattatagg tattacaagt ggatttttag ccgctttagc
    13381 tcttacaagt gtaagagaac ttagaaaatt ttacactaca gaacaaattg ctttttcttt
    13441 cattctttta ggaaccttaa tgcctttaat ttctatgatt agcgccgaat tttttgaacc
    13501 acaacatctt gattctttgc atttagactt cattctagca ccttttatta tgccaagtct
    13561 tacagcttgg cttatcattg ccattatggg aactttaggt actatttatc aaattcatgt
    13621 cactaaagcc tatggtattg ctaaacaagc aggcatagta gctggggtta gctatcttga
    13681 tgtagtattt agtatgatag tggggataat tttaggagac aatttaccaa gtgctatggt
    13741 ttttttgggt ataataggca ttattttcgg tggattaatt ttagttaaaa ataaaggaaa
    13801 aaaatgaaaa aaatgaaaaa aacaatactt atcgcaggtc cttgtgtgat agaaagcaag
    13861 gatttggttt ttaaaatcgc tgaacaatta aaaaatttca atgaaaatcc aaatatagaa
    13921 ttttatttca aatcaagctt tgataaagct aatcgtacaa gtattaattc tttccgaggc
    13981 cctggtcttg aagaaggatt gagaatttta caaagtgtta aaaatgaatt tggcatgaaa
    14041 atcttaaccg atatacatga aagcaatcaa gcaaatcctg taagcgaaat agccgatgtc
    14101 ttacaaattc ctgctttttt atgtcgtcaa acagatttac ttgtagctgc agcaaaaacc
    14161 aaagcaaaag ttaatatcaa aaaaggacag tttttaaatc caagcgatat caaatacagc
    14221 attaaaaaag ttcttcaaac ccgtggtata gaagatgatg gctataaagt agctcagaaa
    14281 aacggtgttt ttgtggccga aagaggagct agctttggct atggaaattt agtagtagat
    14341 atgcgttctt tggttatcat gcgcgaattt gctcctgtaa tttttgatgc cactcatagc
    14401 gtacaaatgc caggagctgc aggaggaagc agtggggggg aaagtgaatt tgtagaacct
    14461 ttagcaaggg cagcagcagc tgtaggtgta gacggctttt tctttgaaac acacatcaat
    14521 ccttgcgaag ctttgtgcga tggatctaat atgcttgatc ttatacgcct taaaaattgc
    14581 gttaccacgt tattagaaat acaaaatatc ataaaggaaa aataaatgaa tatcattgaa
    14641 ggaaaattaa atttagattc aaatacgaaa attgctatca tcaatgcaag atttaatcat
    14701 atcatcacag atcgccttgt agaaggagca aaagatgctt ttttaagaca cggaggtaaa
    14761 gaagaaaatc taagccttat acttgttcct ggtgcttttg aacttccata tgtattaaaa
    14821 aaagctatag aaagcaaaaa atttgatgca atttgctgtg taggtgcagt gattcgtggc
    14881 tcaactccgc attttgacta tgtttcagca gaaaccacta aaggtatagc caatgtgagt
    14941 ttaaatcata atatccctgt aagttttggt gttttaacca cagatactat agaacaagcc
    15001 atagaaagag ctggaagcaa agcaggtaac aaaggctttg aggctatgac aactgtgatt
    15061 gagatgttga atttaaacaa ggaactttaa tggcaacgcg tcatcaagtt cgccaaagcg
    15121 ttatctcttt gctttatgct tttgaattaa attctcaaaa cgatgttttc atagatgaaa
    15181 ttttagatga aaaaaaaata cgcaatgagc aaaaaaaatt taccttgaat ttatatcatg
    15241 gaattttaga taacttaagc aatattgatg aaaccctaaa ttcatttcta aacgataatc
    15301 aaatcacagc tttaggacat gtagaaagag ctatactaag acttggagct tatgagctgc
    15361 tttttagcga tactcctagt gccattgtta ttaacgaagc catagaactt gccaaagaac
    15421 ttgccaatga caattctcca aaatttataa atggggtttt agacgccttg ataaaggcta
    15481 aaaaatgaag ctttgcgtcg cacttgatct ttccacaaaa gaagaatgtt taaaacttgc
    15541 taaagaatta aaaaatttag acatatggtt aaaagtaggc ttaagagcat atttaagaga
    15601 tggctttaaa ttcatagaag aacttaaaaa agttgatgat tttaaaatat ttcttgatct
    15661 taaaatttat gatatcccta acactatggc agatgcttgc gaagaaatat caaaactcgg
    15721 agttgatatg atcaatatcc atgcaagtgc tggaaaaata gctatgcaag aagttatgac
    15781 acgacttaac aagcttccaa aaagaccttt agttttagca gtttctgctc ttacaagttt
    15841 tgatgaagaa aattttttta gcatttataa acaaaaaatc aaagaagctg tgattgaatt
    15901 ttcaaaaata tcttatgaaa atggacttaa tggcatggta tgttctgtct ttgaaagtaa
    15961 aatcatcaaa gaaaatactc aaaaaaactt cttaactctc acgccaggaa ttcgtccttt
    16021 tggagaaaaa aatgatgatc aaaaacgagt tgctgattta acaatggcta aagaaaattt
    16081 aagcgatttt atagtagttg gacgccctat ttataaagat aacaacccta gaaaaatttg
    16141 tgaaaaaatt ctacaagaaa tttaataatc att
//
LOCUS       DAPWAA010000036        16149 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.036, whole genome shotgun sequence.
ACCESSION   DAPWAA010000036 DAPWAA010000000
VERSION     DAPWAA010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16149)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16149)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16149
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.036"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(156..1352)
                     /locus_tag="RTF91_001088"
     CDS             complement(156..1352)
                     /locus_tag="RTF91_001088"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDZ4943972.1"
                     /translation="MYLFTSEVVSAGHPDKCADIIADTIVDILLKNDKNSRVASEVFV
                     AGNKVVIGGEVKSNHKLSKTDYDNLVKDVLKNIGYDGTGYFSKEQCLHPDEVDVMVFL
                     NEQSPDINQGVDQEDGETGAGDQGIMFGFASCEAEEYMPAAISYARILCDRVYAYAKA
                     NPHELGVDIKTQVTIDYGTKINFENCKPQSIHTIVVSVPCVESMKIEDLRSLVMKLIL
                     DSNLPKELFDPNKTRILINPTGKYVNHSSLHDSGLTGRKLIVDSFGGYSPIGGGAQSS
                     KDYTKVDRSGLYAGRWLAKNIVAAGLAKKCIVQLSYAIGVAKPTSVSVDCMGTNTSAN
                     DDILSDFVMQNFSLTPNWIRDKFHLDKPSKETFLYADVAARGQVGQKDYPWEKLDAVE
                     QFKKLL"
     gene            1492..2715
                     /gene="sstT"
                     /locus_tag="RTF91_001089"
     CDS             1492..2715
                     /gene="sstT"
                     /locus_tag="RTF91_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HDZ4943973.1"
                     /translation="MFSKIIQSYTKGNLIIQICIGIALGILIGISSKEISEIANLLGI
                     LFTSALKAIAPMLVFILILTSICTKDFSQSGTKIKNIIILYIVGTFLASACAVLTNFF
                     FPVKLVLDGVQSATNSSPTHMSEIFKDLLFKIVDNPINALSNGNYLGILTWAIAGGIA
                     LKHCSNEAKQVFIDINEGVLKIVKFVVKLAPFGIFGLVANSVAQTGAQGLLSYLKLLI
                     LLVVTMLFITFVINALIVFFYTRKNPFPLIFICLRHSAFFAFFTRSSTANIPVNMALC
                     AKLGIDKEFYGISIPLGATINMAGAAVTIAILSLTAANTVGIEISLLQAFLLSIIATF
                     AACGASGVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVIQDSVETALNSSTDVL
                     FTAICSKNELNYNIK"
     gene            2725..3612
                     /locus_tag="RTF91_001090"
     CDS             2725..3612
                     /locus_tag="RTF91_001090"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HDZ4943974.1"
                     /translation="MHHLITTRDFSKVEIMELFKEAGDFLDEKPRTCLEGKSITTIFF
                     ENSTRTLSSFESAAKRLGARVLRLDVSRSSSSKGETLYDTAAILDAMSPNAIVVRHAN
                     SGVPLILAKHMHCPVVNGGDGKHAHPTQALLDLFTIYNHFQGDIEGKKICIVGDIKNS
                     RVAASNIELLSRFNLDITLVAPPHFMPNTHLKKYYKLDENIIANSDIIMSLRTQTERH
                     NKTVYASLKDYANDFCIQKSLIKDKKLILLHPGPVNRNIDISDEIMSDERTLVLKQVK
                     NGVAIRMAVLKKLILENEG"
     gene            3616..5337
                     /locus_tag="RTF91_001091"
     CDS             3616..5337
                     /locus_tag="RTF91_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HDZ4943975.1"
                     /translation="MLEWDLSALFHDKETLQNFTQDQIQQSLNFKKNYENKLHTLNAN
                     DFLQALKNYENLNQAFGKIMTYAYLLFAKNTQNGSFYAKYEEECKKIEENLLFFELEF
                     CELSSEKSQEFITFCKDYSFYLSNLLQNKLYNLSKNEERIMLYLSNTGANAFSRLFDE
                     SMSALKIPFEGKKLSKEEILSKMYDEDRKIRKKAAKKFSKVLQKNSRLLSFIINMIKT
                     ERKNISSLRGYKNAEISRHISNQISQKSVDSLIISAQKHFDLVSQFYKRKKQILGYDD
                     LKDYDRYAPIGKEASFDFKTSKNIVLEAFQAFSPQFYDIAKNAFDKGWIDVYPQENKQ
                     GGAFSHSATSDAHPFVLLNYTDKRRDLFTLAHELGHTIHQKLSYSVSYLNQNTPLTTA
                     ETASVFAEMLVFDFIKDKLKKEELLSLYANKIEDIFATFYRQINFTCFERRLHAQENE
                     LSTEEINKIWMEESQKMFQNSVKLTKNYASWWSYIPHFIHSPFYCYAYAYAQLLVLAL
                     YGLYRSKKCENFKELYIKMLSLGGSVSPKELVGMFGFDIEDENFWEIGIKEIQKLIDE
                     FMELQSC"
     gene            5331..5768
                     /locus_tag="RTF91_001092"
     CDS             5331..5768
                     /locus_tag="RTF91_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943976.1"
                     /translation="MLETILKNENFIHTMQKHCYEIITNLLEEKIEFSIVANTNFIDF
                     DPELPKELDVKQNPYALFALGGYTFESIQLNKDYIQFHAGFGNDDFDSFVKVDLGAIT
                     QIQIENSILFVNFSLYKREDSKNLQKSKNIFLKNPKNKDIFKK"
     gene            5765..7840
                     /locus_tag="RTF91_001093"
     CDS             5765..7840
                     /locus_tag="RTF91_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDZ4943977.1"
                     /translation="MNLFKDLNDSQKEAAGHIDGAMLILAGAGSGKTKTITTRLAYLI
                     GEVGIPSHNTLTLTFTNKAASVMRRRALNFLQGNHNPLLCTFHKFGLLFLKLHFERLE
                     RKNSFIVIDTDDTKKIIKDLILDKSKDNVYNIIKYISYCKNEGKRANDVFENLNSLKE
                     HNFEKYQNEYKFVNYYRAYEEYLLKQNFVDFDDLLLLSNLILESDINFAKEQSLLYNY
                     ITVDEYQDTNTLQYKILKNLCCMHENITVVGDDDQSIYSWRGAKIENILNFQNDFKNV
                     KLVKLEQNYRSVGTILQAANNLISHNEQRLGKTLICTKDAGENIKILKNKSEKDEGLC
                     VAQEVKKLLNSGVEAKEIAILFRVNALSRAIEEAFMKEKISYKLLSGMRFYERLEIKD
                     LISYLRLILNPNDDLSFRRIINRPKRSIGEKALKNLEEYAKKRQISLFDALCESDGGV
                     GILTTKKAQNEANIFIQNIHTLKSYDSAKKVFDNIEELFKIKDYFSEQDDGDERIGNL
                     DEFYANLREKLKEDPQASLEDLLSEISLLSDQDNLDEECVCLMSIHASKGLEFDYVFI
                     IGFDEGFFPLNNGENLEEERRLAYVAITRTKKFLTISVANSRFHHGSRANINPSRFLE
                     ESKLINKKSKNQNIQKTTFCKGDLVKHKIFGIGRVIKVSKSGKEEKLNINFGGIMRVI
                     MASFVEKAV"
     gene            7837..8655
                     /gene="truB"
                     /locus_tag="RTF91_001094"
     CDS             7837..8655
                     /gene="truB"
                     /locus_tag="RTF91_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDZ4943978.1"
                     /translation="MNKIFTAFKPRGLSSNAFLNTLKKKYKNKKAGYSGTLDPFAKGV
                     LIVAFGQYTKLLRFLKKTPKTYKATLWLGVYSLSLDDQNIKKIQNLKEFNLKTLKQII
                     DQMQGIISYTPPQFSAKRINGTRAYELAKKGIEANLKPCQMKVFDCKILSYNHPFLNI
                     EITVSEGAYIRSYCELFARKLGISATLSSLERIKEGEFVYNDEKSLDVLKYIDLKPNF
                     IKDLNKLENGTKIFIEELKFHDEGNYYIETEKYFSIINIKENTVKYLLNKVEKC"
     gene            8649..8876
                     /gene="csrA"
                     /locus_tag="RTF91_001095"
     CDS             8649..8876
                     /gene="csrA"
                     /locus_tag="RTF91_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDZ4943979.1"
                     /translation="MLILSRKENESIVIGEGIEIKVVQTGKGYAKIGIEAPKSLMILR
                     KELIQQVKDENLHSVVQNDIKLDDLSKKLIR"
     gene            8873..9640
                     /locus_tag="RTF91_001096"
     CDS             8873..9640
                     /locus_tag="RTF91_001096"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDZ4943980.1"
                     /translation="MKAYAKANIFLKLTGFDSRKYHLLESRFILLKDIFDELELVDKE
                     SDSKKEFEIISNFKCENNIIQKAYLLLSKKYDNELKELFSTKSLKLTKNIPVCAGLGG
                     GSSDCASFLLLMNETLNLKLSLQELINLSMQLGSDIAFFLSGFSSANVSGCGEIIEEF
                     EDDIPVLKWIFPQISCQTNAVYDEFDREIFDFQKNNNQAQIYKKLSTKELLQNFKNKE
                     LNDLFTPCVTLYPKMKPYLQENFFLSGSGSTVFKVDR"
     gene            9637..10089
                     /gene="smpB"
                     /locus_tag="RTF91_001097"
     CDS             9637..10089
                     /gene="smpB"
                     /locus_tag="RTF91_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDZ4943981.1"
                     /translation="MKIIARNKKALFDYSIIERFEAGLVLKGSEVVALRAGRANLKDS
                     FVRIIKNEIFLLNAHISLLHTTHSFYKHEERGARKLLMHRKQIDKLLGKVSVEGYTIV
                     ALDLYFNTKNKVKATLALAKGKNLHDKRETLKKKQADLEARAAMKNYK"
     gene            10100..10699
                     /locus_tag="RTF91_001098"
     CDS             10100..10699
                     /locus_tag="RTF91_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDZ4943982.1"
                     /translation="MKKILTLFLISLAFFLNACSKEEIQNDFMFEEYHKGDKIVLNSV
                     NGGSKTLIRTDKGFVVEGEEGKVLMFDFFGTFCTPCKEEALDLSKLWKNNSSKFIIIG
                     LTHFEDVSDETVKKFADDYGAYYFLSNDNSNDRIIAQILKDIDYQNMEQLPFKVVLKN
                     GIYQKVSDYWNDNAPTNFYLGKIPTELMQEDLNNIYKGK"
     gene            10699..10989
                     /locus_tag="RTF91_001099"
     CDS             10699..10989
                     /locus_tag="RTF91_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HDZ4943983.1"
                     /translation="MPKIQTLEQIKLSEPKMYKVILLNDDVTTMDFVIEILINIFHQN
                     LEKANQTMLEIHHNGSGICGIYTQEIALSKQKKVIDAAKLANFPLQVKVEEE"
     gene            10986..13115
                     /locus_tag="RTF91_001100"
     CDS             10986..13115
                     /locus_tag="RTF91_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDZ4943984.1"
                     /translation="MKYQENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLSTDFKD
                     IFEEFSDGDFELLETELKNHISQNNQVIKQEIEPTISVVLNEILLSSRSKNNEIKIID
                     FLEKLIQDPRSYSSYLLKKHNINLNKIQELQNHENIQNLSNHTSDLTLLAQNGKIDPL
                     IGRKFELERMMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIIEKKVPKNLQNAKIF
                     SLDMASILAGTKYRGDFEKRIKEILNELEKIPNAILFIDEIHTIVGAGSTGESHADFS
                     NLLKPALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGLK
                     NKYEDFHHVKLNDEILKYAVIWGKKFFNDKFLPDCAIDLIDELGASFALNPKAKKNAN
                     LKDLENVLAKMTHHHKMFEFDQNKALMNLKANLKTKIFGQDEVIDSLVSTLKQSFAGF
                     KNSNTPRGVFLFTGSSGVGKTELCKALAEFLGLNLERFDMSEYAEKHAISKLIGSPAG
                     YVGFEEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFK
                     NTIIIMTSNLGLKESNELGFLSKNEEKSNRAIKDFFAPEFINRIDKILHFNDLNDTVL
                     IKIIQKELDEISKNLNNIKLSVDKKAKIYLAKKTYNKEFGVRLLKRIISEEIGEKISD
                     EILFGKLKKGGIAKIKLGKNGKLEFIF"
     gene            13090..13737
                     /locus_tag="RTF91_001101"
     CDS             13090..13737
                     /locus_tag="RTF91_001101"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HDZ4943985.1"
                     /translation="MESSNLYSKLLNAPKNAPVFLSQNLEANFIIKAYAFGLFPWTSK
                     PVTWWCPDPRCVLYPNEIHIQKNMKKFINLYQIKLDYDFLKLITLCRNTRSQSWIDDE
                     FIATYHELFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKIAMIKL
                     CNLLKPYDFIIDCQVYNQHLEFMGAHNISRKEFLNILKEKCNQESGFKNFKDLII"
     gene            complement(13761..15050)
                     /gene="cetZ"
                     /locus_tag="RTF91_001102"
     CDS             complement(13761..15050)
                     /gene="cetZ"
                     /locus_tag="RTF91_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetZ"
                     /protein_id="HDZ4943986.1"
                     /translation="MFGTKKNNAEVIEQLERKCNGLGDILRSIGNTMAVIEFTTDGII
                     LEANQNFLTTMKYSLSEIKGKHHSMFCLPKVVNSSEYSDFWKDLRDGKARSGLFRRIA
                     KGGIDVYLEANYLPISDNNGHVYKIIKFANDITQRHYEMLDLRNTIAAANRSMAIIEF
                     KPDGTIITANENFLRTMDFNIDEIKGKHHSMFCDSNYRQSKDYVQFWEDLREGKFQSG
                     KYIRYGKNNKKVYLEASYNPVKNDDGKIYKVIKFATDISEQVKKDQEKLHLISELAEK
                     NDNLTQDGDRVIENTVSNVQNIADMMSQSSNLVSSLNQQSDEIKSIIQTISDIADQTN
                     LLALNAAIEAARAGEYGRGFAVVADEVRNLAERTGHSVNEITTTINSIRNVTSQVVES
                     IKSGLENVNQSVELAKEARECMEKIRESSAEVTKAMS"
     gene            complement(15132..15758)
                     /locus_tag="RTF91_001103"
     CDS             complement(15132..15758)
                     /locus_tag="RTF91_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HDZ4943987.1"
                     /translation="MGSELYLMFFAAITLLAILNPFGNLTQFLSMSDGLPLMLRKKLF
                     RTILYTALAIVLVFLLSGPLFMNYIFRVSLDDLRVSGGLVLIIMAIKNLLFSTKIATK
                     DFNSYQNMNDKEILRQSLIPMAFPMLVGPGTLASVIVIAEDGGLDVALGGVMIAFIFM
                     FILFHFAATIEKIVGKLILHVFSRIAQVFIAAMGFKMIIVGLKDIFNL"
     gene            complement(15773..16132)
                     /locus_tag="RTF91_001104"
     CDS             complement(15773..16132)
                     /locus_tag="RTF91_001104"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-R-sulfoxide reductase"
                     /protein_id="HDZ4943988.1"
                     /translation="MKELNEEEKKVILNKGTEVPFSGKYNDFYEKGIYQCKQCGASLY
                     KSEDKFKSGCGWPSFDDEIKGAIKRIPDKDGIRTEIVCVNCNGHLGHVFEGEGFSAKN
                     VRHCVNSISLEFVKSKD"
BASE COUNT         6040 a         2431 c         2359 g         5319 t
ORIGIN      
        1 gggtttttac cccaaagcta aattaattta gcttccttcc taacttttat atttatgagg
       61 gatattaaaa aatatccctc taagtcaaat ttaatcttca ttaaatcttt taattataca
      121 agccttgttt aagcttgtat aatatttata attttttaaa gtaatttttt aaactgctcc
      181 acagcatcaa gtttttccca aggataatcc ttttgtccta cttgtccacg agctgctaca
      241 tcggcataaa gaaaagtttc tttacttggt ttatccagat gaaatttatc acgaatccaa
      301 tttggtgtta aagagaaatt ttgcatgaca aaatcactta aaatatcatc gtttgcacta
      361 gtatttgttc ccatgcaatc cacgcttacc gaagtaggtt ttgcaacacc tatagcataa
      421 ctaagctgaa cgatacattt tttagcaagt cctgctgcaa ctatattttt agctagccat
      481 ctacctgcat aaagtccgct tctatcaact ttagtgtaat ctttactaga ttgtgcgcca
      541 ccacctattg gagaatagcc tccaaaacta tccactataa gttttcttcc tgttaaacca
      601 ctatcgtgca aagaagagtg attgacatat ttacctgttg gattgattaa aattctagtt
      661 ttattaggat caaaaagttc ttttggtaaa ttgctatcta aaataagttt catcactaaa
      721 gatcttaaat cttctatttt catactctca acgcaaggta cagaaaccac tatggtatgg
      781 atgctttgag gcttacaatt ttcaaaattt atcttagtac cataatcaat ggtcacttga
      841 gttttaatat ccactccaag ttcatgcgga tttgcttttg cgtaagcata aactctatca
      901 catagaattc ttgcataact aatagccgct ggcatatatt cctcagcttc acaacttgca
      961 aaaccaaaca taataccttg atcacctgct cctgtttcgc catcttcttg atcgacacct
     1021 tgattaatgt cagggctttg ctcatttaaa aacaccataa catcaacttc atcaggatgc
     1081 aaacattgct ctttactaaa atatcctgtt ccatcataac caatgttttt taaaacatct
     1141 ttaactaaat tatcgtaatc agtcttacta agcttatgat ttgacttaac ttcgcctcca
     1201 atcacaacct tatttcctgc gacaaaaacc tcactcgcca cccttgaatt tttgtcattt
     1261 ttcaagagta tatccactat cgtatcagcg attatatcag cacacttgtc tggatgacct
     1321 gcgcttacga cttctgaagt gaatagatac ataaaaagtc ctttcattta aaatgaacta
     1381 caattgtacc gaaataaact tatcaaagct taataagtta aaaattcact aaaattaagc
     1441 aaaagttagc taaaatcaac tttgatataa aaaatattta aaaaggtttt tatgttttct
     1501 aaaatcattc aaagctatac taaaggcaat cttataatcc aaatttgtat aggtatagca
     1561 ctagggatac tcataggtat tagctctaaa gaaatatctg aaattgcaaa tttactcgga
     1621 atacttttta caagtgcctt aaaagccatt gctccgatgc ttgtttttat tttaatttta
     1681 acctcaattt gcactaaaga tttttctcaa agtggtacta aaatcaaaaa tatcatcatt
     1741 ttatatatag taggtacctt tcttgcctca gcttgtgcag ttcttactaa ttttttcttc
     1801 cctgtaaaac ttgttttaga cggagttcaa agtgctacaa actcgtctcc aactcatatg
     1861 agtgaaattt ttaaagatct tttatttaaa atcgttgata atcccataaa cgctctttca
     1921 aatgggaatt atttaggaat tttaacctgg gcaatagctg gaggtatagc gttaaaacac
     1981 tgctctaatg aagcaaaaca agttttcata gatattaacg aaggggtttt aaaaatcgtc
     2041 aaatttgtag taaaacttgc tccttttgga atttttggac ttgtggctaa ttctgtagca
     2101 caaacagggg cacaaggttt actaagctat ctaaaacttt taattttact tgtagttact
     2161 atgcttttta ttacctttgt tatcaacgct ttaatagtct ttttttatac aagaaaaaat
     2221 ccttttcctt taatttttat ctgtctaaga cacagtgcgt tttttgcttt tttcacaaga
     2281 agttcaacag caaatattcc tgtaaatatg gcactttgcg ccaaacttgg catagataaa
     2341 gagttttatg gtatttccat acctttagga gctactataa atatggcagg agcagcagtt
     2401 actatagcta ttttaagtct tactgcagcc aataccgttg gtatagaaat aagccttttg
     2461 caagcttttt tattaagtat tattgctacc tttgcagctt gtggagcaag tggggttgca
     2521 ggaggatctt tactgcttat acctttggct tgttctttat ttaatataga ctatgatatt
     2581 gccatgaaag tagttgccat aggttttatc ataggggtta ttcaagatag tgttgaaact
     2641 gctttaaata gttccacaga tgtccttttt acagcaattt gttctaaaaa tgaattaaat
     2701 tacaatatca aataaggtaa aaatatgcat catctcatca ctacaaggga ttttagtaaa
     2761 gttgaaatta tggaactttt taaagaagct ggtgattttt tagatgaaaa acctagaact
     2821 tgtcttgagg gaaaaagcat cacgacaatt ttttttgaaa attctacacg tactctttcg
     2881 tcttttgaaa gtgctgcaaa aagattaggt gctagagttt tacgccttga tgtttcaaga
     2941 tcaagttcta gcaaaggcga aactctttat gatactgctg caattttaga tgccatgagc
     3001 cctaatgcta tcgttgtaag gcatgcaaac tcaggagttc ctttaatatt agcaaaacat
     3061 atgcattgtc ctgttgttaa cggaggagat ggaaaacacg ctcaccctac tcaagcctta
     3121 ctagatttat ttaccattta taatcatttt caaggtgata ttgaaggtaa aaaaatttgc
     3181 atcgtaggtg atattaaaaa ctctcgtgta gcagcatcta acatagaact tttatcaaga
     3241 tttaatcttg atattacttt ggtggctccg ccgcatttta tgcctaatac tcatcttaaa
     3301 aaatactaca aacttgatga aaatatcata gcaaattcag atattattat gagtcttaga
     3361 acacaaactg aaagacacaa taagactgtt tacgcttcac ttaaagatta tgcaaatgat
     3421 ttttgcattc aaaaaagcct gataaaagat aaaaaactta ttttattgca cccaggtcct
     3481 gttaatcgta atattgacat aagcgatgaa ataatgagtg atgaaaggac tttggtttta
     3541 aaacaagtca aaaatggcgt agctattaga atggctgttc ttaagaaact catactagaa
     3601 aatgaaggat aaaaaatgtt agaatgggat ttaagcgctt tatttcacga taaagaaaca
     3661 ttgcaaaatt ttacacaaga tcaaatccaa caaagtttaa atttcaaaaa aaactatgaa
     3721 aacaaacttc atacattaaa tgctaatgat tttttacaag ctttaaaaaa ttatgaaaat
     3781 ttaaatcaag cttttggtaa aatcatgact tatgcttatt tactttttgc taaaaacact
     3841 caaaatggtt ctttttacgc aaaatatgaa gaagaatgta aaaaaataga agaaaattta
     3901 ctttttttcg aacttgaatt ttgtgagtta agctctgaga aaagtcaaga attcataact
     3961 ttttgcaagg attatagttt ttatctttct aatttattac aaaacaaact ctacaacctt
     4021 agcaaaaatg aagaacgcat tatgctttat ctttcaaata caggcgcaaa tgcctttagc
     4081 agactttttg atgaaagcat gagtgcttta aaaatccctt ttgaaggcaa aaaacttagt
     4141 aaagaagaaa ttctaagcaa aatgtatgat gaagatagaa aaatacgtaa aaaagctgct
     4201 aaaaaattta gcaaagtctt acaaaaaaat agtaggcttt taagttttat tatcaatatg
     4261 attaaaactg aaagaaaaaa tataagctca ttaagaggct ataaaaatgc tgaaatttca
     4321 agacatatta gcaatcaaat atcgcaaaaa agcgttgatt ctttaattat aagtgcacaa
     4381 aaacattttg atttggtgtc acaattttac aaaagaaaaa aacaaatttt aggctatgat
     4441 gatcttaaag actatgacag atatgctcct ataggaaaag aagcaagctt tgactttaaa
     4501 acaagtaaaa atattgtttt agaagcattt caagcttttt ctccgcaatt ttacgatata
     4561 gcaaaaaacg cttttgataa aggctggatt gatgtttatc cgcaagaaaa taagcaaggt
     4621 ggtgctttct cacattctgc aacatctgat gcacaccctt ttgttttact aaactacacc
     4681 gacaaaagac gcgatctttt tacacttgca catgaattag gacacactat ccatcaaaaa
     4741 ctttcttata gtgtgagcta tttaaatcaa aacacacctt taactactgc agaaacagct
     4801 tcagtttttg ctgaaatgtt agtttttgat tttatcaagg ataagctaaa aaaagaagaa
     4861 cttttgtctt tatacgcaaa taaaattgaa gatatttttg caacttttta cagacaaatt
     4921 aattttactt gttttgaaag acgcttgcac gcacaagaaa atgaacttag caccgaagaa
     4981 atcaataaaa tatggatgga agaatctcaa aaaatgtttc aaaatagcgt aaaacttaca
     5041 aaaaattatg cttcttggtg gagttatatc cctcatttta tccattctcc tttttactgc
     5101 tatgcttatg cttatgcaca acttttagtt ttagctcttt atggacttta tagaagtaaa
     5161 aaatgtgaaa atttcaaaga actttatatc aagatgcttt ctttaggtgg aagtgttagc
     5221 ccaaaagaac ttgtaggaat gtttggtttt gatatagaag atgaaaattt ttgggaaata
     5281 ggcataaaag aaattcaaaa actcattgat gaatttatgg agttacaatc atgctagaaa
     5341 caatcttaaa aaatgaaaac tttatccata ccatgcaaaa acattgttat gaaattatta
     5401 caaatctttt agaagaaaaa attgagtttt ccatagttgc taatacaaat tttatagact
     5461 ttgatcccga acttcccaaa gagcttgatg ttaaacaaaa tccttacgct ctttttgctc
     5521 ttggaggata tacctttgaa tccatacagc taaacaaaga ttacattcaa tttcacgcag
     5581 gctttggaaa tgatgatttt gatagttttg taaaggttga tttaggagcc attacacaaa
     5641 ttcaaataga aaatagtatt ttatttgtta actttagcct ttacaaacgc gaagacagta
     5701 aaaatttaca aaaatctaaa aatatatttt taaaaaatcc aaaaaataaa gatattttta
     5761 aaaaatgaat ctatttaaag atttaaacga tagtcaaaaa gaagcggcag gtcatattga
     5821 tggagccatg cttatcttag caggtgcagg tagcggaaaa accaaaacta ttaccactcg
     5881 ccttgcttat cttattggtg aagtgggtat tccatcacat aatactctta ctcttacttt
     5941 tacaaataaa gcggctagcg ttatgcgtcg tagagcatta aattttttac aaggtaatca
     6001 caaccccttg ctttgcacct ttcataaatt tgggcttttg tttttaaaac ttcattttga
     6061 aagattagag cgtaaaaata gttttattgt tattgataca gatgatacaa aaaaaataat
     6121 taaagattta atccttgata aaagcaaaga taatgtctat aatataatca aatacatatc
     6181 ttattgcaaa aatgaaggta aaagagcaaa tgatgtcttt gaaaatttaa attcattaaa
     6241 agaacataat tttgaaaaat atcaaaatga atacaaattt gtcaactatt accgtgctta
     6301 tgaagaatat ttattaaaac aaaattttgt agactttgac gatcttttat tattaagcaa
     6361 tctcatttta gaaagtgata taaattttgc caaagaacaa agtttgcttt ataattacat
     6421 tacagttgat gaatatcaag atacaaatac cttacaatat aaaattctaa aaaacctatg
     6481 ttgcatgcat gaaaacatta cagttgttgg tgatgatgat caaagtattt atagctggcg
     6541 tggagcaaaa attgaaaata ttctaaattt tcaaaatgat tttaaaaatg ttaaacttgt
     6601 aaaacttgaa caaaattacc gttcagtagg aactatttta caagcagcaa ataatctcat
     6661 atctcacaat gaacaacgac ttggaaaaac tttaatctgt accaaagatg ctggcgaaaa
     6721 tattaaaata ttaaaaaata aaagcgaaaa agatgaaggt ttatgtgtag ctcaagaagt
     6781 aaaaaaattg ctaaattctg gggtagaagc taaagaaatt gctattttat ttcgagtcaa
     6841 tgcattatca agggcaatag aagaagcatt tatgaaagag aaaatttcct ataaactgct
     6901 tagtggtatg cgtttttatg agagattgga gataaaagat ttaatctcat atcttagact
     6961 tattttaaat ccaaatgatg atttatcgtt tagacgcatt attaatcgcc ctaaacgatc
     7021 cataggagaa aaagctctaa aaaatttaga agaatacgca aaaaaacgtc aaatttcact
     7081 ttttgatgcc ctatgtgaaa gtgatggcgg tgtaggaatt ttaacgacaa aaaaagcaca
     7141 aaatgaagca aatattttta tacaaaatat tcacacttta aaaagctatg atagtgcaaa
     7201 aaaagttttt gataatatag aagaattatt caaaattaaa gattatttct cagagcaaga
     7261 tgatggggat gaaagaatcg gaaatcttga tgagttttat gccaatctaa gagaaaagct
     7321 caaagaagat cctcaagctt ctttggaaga tttgcttagt gaaatttctt tattaagcga
     7381 ccaagataat ttagatgaag aatgtgtttg cttaatgagt attcatgcta gtaaaggctt
     7441 agaatttgat tatgttttta taataggctt tgatgagggc ttttttcctt taaacaatgg
     7501 agaaaatctt gaagaagagc gccgtcttgc ttatgttgct atcactcgta ctaaaaaatt
     7561 tcttacaata agcgttgcaa attctcgttt tcatcacgga tcaagagcga acatcaatcc
     7621 tagtcgtttc ctagaagaaa gcaaattaat caataaaaaa tcaaaaaatc aaaacataca
     7681 aaaaactact ttttgtaaag gagacttagt taaacataaa atttttggta ttggcagagt
     7741 tattaaagtt agcaaaagtg ggaaagaaga aaaacttaat attaattttg gtggcataat
     7801 gcgtgtaatc atggcaagct ttgtggaaaa agcagtatga acaagatctt tacagccttt
     7861 aaaccaagag gtttgagttc taatgccttt ttaaacactt tgaagaaaaa atataaaaat
     7921 aaaaaagcag gatattctgg cacccttgat ccttttgcta aaggagtttt aatcgttgca
     7981 tttggacaat acacaaaact tttgcgtttt ttaaaaaaaa ctccaaaaac ttacaaggct
     8041 actttatggc ttggagttta ttccttaagc cttgatgatc aaaatataaa aaaaattcaa
     8101 aacctgaaag aatttaatct taaaacctta aaacaaatca ttgatcaaat gcaaggaatt
     8161 atctcttata caccaccgca atttagtgct aaaagaatca atggaactcg tgcttatgaa
     8221 ctagctaaaa aaggtataga agcgaattta aaaccttgcc aaatgaaagt atttgattgc
     8281 aagatcttaa gctacaatca tcccttttta aacatagaaa tcacagtcag tgagggtgct
     8341 tatataagat cttattgtga actttttgct agaaaactag gtattagtgc aactttaagc
     8401 tctttagagc gcatcaaaga aggtgagttt gtttataatg atgaaaaaag cttagatgtg
     8461 ttaaaatata ttgatttaaa accaaatttt attaaagatt taaacaaact tgaaaatggt
     8521 actaaaattt tcattgaaga attaaaattt catgatgaag gaaattatta tattgaaaca
     8581 gaaaaatatt ttagcataat taatattaaa gaaaatacag taaaatatct tctaaataag
     8641 gttgaaaaat gttaatatta tcaagaaaag aaaatgaaag tatagttatc ggagaaggta
     8701 tagaaatcaa agtggttcaa acagggaaag gatatgccaa aataggcata gaagctccaa
     8761 aatcccttat gatacttaga aaagagctta ttcaacaagt aaaggatgaa aatttacatt
     8821 ctgttgttca aaacgatatt aaacttgatg acttaagtaa aaaactgatc agatgaaagc
     8881 ctacgctaaa gcaaatattt ttttaaaact taccggtttt gactcaagga aataccatct
     8941 tttagaatca cgctttatac ttttaaaaga tatttttgat gaacttgaac ttgttgataa
     9001 agaatcagac tccaaaaaag aatttgaaat catcagtaat tttaaatgcg aaaataacat
     9061 tatccaaaag gcttatttac ttctttctaa aaaatatgat aatgaattga aagaattatt
     9121 tagcacaaaa agcctaaaac ttacaaaaaa tattccagta tgtgctggac ttggtggtgg
     9181 aagtagtgat tgtgcaagtt ttttactact aatgaatgaa actttaaact taaaattaag
     9241 cttgcaagaa cttataaatt taagcatgca actagggagt gatattgctt tttttctaag
     9301 cggttttagt tctgctaatg taagtgggtg tggagaaatt atagaagaat ttgaagacga
     9361 tatacctgtt ctaaaatgga tttttccaca aatatcttgc caaaccaacg ctgtttatga
     9421 tgaatttgat agggaaatat ttgattttca aaaaaacaat aatcaagcac aaatttataa
     9481 aaaactcagc acaaaagaat tattacaaaa ctttaaaaat aaagaattaa atgatttatt
     9541 taccccttgt gtaactttat atcctaaaat gaaaccttat ttacaagaaa atttttttct
     9601 aagtggtagc ggaagcactg tttttaaggt tgatcgatga agatcattgc aagaaataaa
     9661 aaagctttat ttgactacag tatcatagaa cggtttgaag ctggactcgt tttaaaagga
     9721 agtgaagttg tagccttaag agcaggaagg gcaaatctta aagactcttt tgttcgcatt
     9781 ataaaaaatg agattttttt acttaatgct catatttctt tacttcacac tacacattct
     9841 ttttacaaac atgaggaaag aggtgctaga aagcttttaa tgcatagaaa gcaaatcgac
     9901 aaattattag gtaaagtaag cgttgaagga tatactatcg ttgcattaga tctttatttt
     9961 aatacaaaaa ataaagtaaa agctactctt gctttagcta agggaaaaaa tttgcacgat
    10021 aagcgtgaaa ctttaaagaa aaagcaagcc gatttagaag ctagggctgc tatgaagaat
    10081 tataaataaa ggaaatcaaa tgaaaaaaat tttaacccta tttttaataa gtttagcatt
    10141 ttttcttaat gcttgctcca aagaagaaat tcaaaatgat tttatgtttg aagagtatca
    10201 caaaggagat aaaatagtct taaatagtgt aaatggtggc agtaaaacct taataagaac
    10261 agataaaggt ttcgtagtag aaggagaaga aggaaaggtt ttaatgtttg atttttttgg
    10321 tactttttgc accccatgca aagaagaagc tttagatctt agtaaacttt ggaaaaataa
    10381 ttctagtaaa tttatcatta tagggcttac acattttgaa gatgttagtg atgaaacagt
    10441 taaaaaattc gcagatgatt atggtgctta ctattttcta agtaatgata actccaatga
    10501 tcgtatcatt gcccaaattt taaaagatat agactatcaa aacatggaac aacttccttt
    10561 taaagttgtt ttaaaaaatg gaatttatca aaaagtaagt gattattgga atgataatgc
    10621 tccaacaaat ttttatcttg gtaaaattcc aacagaactc atgcaagaag atttaaataa
    10681 tatctataaa gggaaataat gccaaaaatt caaactctag aacaaataaa acttagcgaa
    10741 ccaaaaatgt ataaagttat actcttaaat gatgatgtaa caactatgga ttttgttata
    10801 gaaattttga taaatatttt tcatcaaaac cttgaaaaag ctaatcaaac aatgctagaa
    10861 attcatcaca atggctctgg aatttgtggc atttacaccc aagaaatagc tctttcaaaa
    10921 caaaaaaaag ttatagacgc agccaaactt gctaattttc cgctacaagt aaaggtggaa
    10981 gaagaatgaa atatcaagaa aatttacaaa aatatcttga caatgccaaa aatctgagcc
    11041 taataaatca ccacgaattt gttacttgtg agcatgtact atttgcattg ctaaaactaa
    11101 gtactgattt taaagatata tttgaagaat tttcagatgg agattttgaa cttttagaaa
    11161 ctgaattaaa aaaccatatt tctcaaaata atcaagtcat taaacaagaa atcgaaccta
    11221 caatatctgt tgttttgaat gaaatcttac tttcatccag aagtaaaaat aatgaaatca
    11281 aaattataga ttttttagaa aaactcatac aagatccaag aagctattct agctatcttt
    11341 taaaaaaaca caatatcaat cttaataaaa ttcaagaact tcaaaatcat gaaaatattc
    11401 aaaatttaag taatcacaca agcgatttaa cacttttggc tcaaaatggc aaaattgatc
    11461 ctttaatagg aagaaaattt gaacttgaaa gaatgatgca aattctttct cgtcgtaaaa
    11521 aaaacaatcc tattttagta ggagaagcag gagttggcaa aactgccatt gtagagggat
    11581 tggcacttgc tattatagaa aaaaaggtac ctaaaaatct acaaaatgca aaaattttta
    11641 gtcttgatat ggctagtata cttgcaggaa caaaataccg tggagatttt gaaaaaagaa
    11701 tcaaagaaat tttaaacgaa cttgagaaaa tacctaatgc tattttattc attgatgaaa
    11761 ttcatactat agtaggagct ggaagtacag gagaatctca cgctgatttc tccaatctct
    11821 taaaaccggc tttaagcaat ggaactttaa aatgcatagg tgcaacaact tttatggaat
    11881 ataaaaatac tttcgataaa aacaaacctc taagccgtcg tttcgctaaa ataaacgtag
    11941 atgagccaag tcaagaagag agtttgcaaa tccttaaagg attaaaaaac aaatatgaag
    12001 attttcacca tgtaaaatta aacgatgaaa ttcttaaata tgctgtaatt tggggtaaaa
    12061 aattttttaa tgacaaattt ttacctgatt gcgctataga tctaattgac gaacttggtg
    12121 cttcttttgc tttaaatcca aaagctaaaa aaaatgcaaa tttaaaagat ttggaaaatg
    12181 ttctagcaaa aatgactcac catcacaaaa tgtttgagtt tgatcaaaat aaagctttaa
    12241 tgaatttaaa agcaaattta aaaacaaaaa tttttggaca agatgaagtt atagatagtc
    12301 ttgtttcaac acttaaacaa agttttgcag gatttaaaaa ttctaataca ccgcgggggg
    12361 tatttttatt tactggatca agtggagttg gtaaaacaga actttgcaaa gctttagctg
    12421 aatttttagg tttaaatttg gaacgctttg atatgagtga atatgcagaa aaacatgcta
    12481 taagtaaatt aataggatct ccggctggat atgtaggatt tgaagaaggt ggacttttaa
    12541 gtaatgctat acgcaaaaat ccttttagtc ttgttctttt tgatgaaata gaaaaagccc
    12601 atcctgattt aagcaatacc tttttacaaa tttttgacaa cgctgaactc actgacaata
    12661 gtggtcttaa agtggatttt aaaaacacaa tcattatcat gacatctaat ctagggctta
    12721 aagaaagcaa tgaacttggt tttttaagta aaaatgaaga aaaaagcaat cgcgccatca
    12781 aagacttttt tgctccagaa tttatcaatc gcattgataa aattttacat tttaatgatt
    12841 taaacgatac cgtgcttatt aaaattatcc aaaaagaact tgatgaaatt tctaaaaatt
    12901 taaataatat aaaattatca gtggataaaa aagctaaaat ctatttagct aaaaaaacct
    12961 ataacaaaga atttggagta agacttttaa aacgtataat ttctgaggaa ataggagaaa
    13021 aaatcagtga tgaaatttta tttggcaagc tcaaaaaagg tggtatagct aaaatcaaac
    13081 ttggtaaaaa tggaaagctc gaatttatat tctaaattac ttaatgcacc taaaaatgct
    13141 cctgtatttt taagtcaaaa tttagaagct aattttatta taaaagctta tgcttttggt
    13201 ctctttccgt ggacaagtaa acctgtcact tggtggtgtc cagatcctag atgcgtgtta
    13261 tatccaaatg aaattcatat ccaaaaaaat atgaaaaaat ttatcaatct ctatcaaatt
    13321 aagcttgatt atgatttttt aaaactaatt acactatgtc gcaatacacg ttctcaaagt
    13381 tggatagatg atgaatttat tgctacttat catgaattat tcactcaagg ctatgcacat
    13441 agtcttgaac tttatgaaaa taacgagctt ataggtggaa tttatggttt aattttagga
    13501 aaagttttct ttggtgaaag tatggtaagt attaaaaaaa atgcatctaa aattgccatg
    13561 attaaacttt gcaatttatt aaaaccctat gattttatca tagattgtca agtctataat
    13621 caacatttag aatttatggg cgctcataat atttctagga aagaattctt aaatatttta
    13681 aaagaaaagt gcaatcaaga aagtggtttt aaaaatttta aagatttaat tatttaaaaa
    13741 aataagcgtg attttcacgc ttatgacatt gccttagtaa cttcagcaga actttcacga
    13801 attttttcca tacattctct tgcttctttt gcaagctcaa cactctgatt aacattttct
    13861 aaaccgcttt taatactttc aacaacttgt gatgtaacat tgcgaataga attaatcgtg
    13921 gtggtaattt cattgacaga atgtcctgtt ctttcggcca aatttcttac ttcatcagca
    13981 acaacagcaa aacctctacc atattcacct gcacgtgctg cttcaatagc agcatttaaa
    14041 gcaagcaaat tggtttgatc cgcaatatca ctaatagtct gaataatgga tttaatttca
    14101 tctgattgct ggtttaagga agaaacaaga tttgaacttt gagacatcat atcggcaata
    14161 ttttgaacat ttgaaacggt attttcaatt acacgatcgc catcttgagt aagattatca
    14221 tttttttctg caagttcact tataaggtgg agtttttctt ggtctttttt aacttgctcg
    14281 cttatatctg tagcaaattt gataacctta taaatctttc catcatcatt tttaactgga
    14341 ttataacttg cctcaagata tactttttta ttattttttc catatcttat atatttacct
    14401 gattgaaatt taccttccct taaatcttcc caaaattgaa cataatcctt agattgccta
    14461 taattagaat cacaaaacat gctatgatgt tttcctttga tctcatcaat attaaaatcc
    14521 attgttctta aaaaattttc attagcggta ataatagtcc catcaggttt aaattcaata
    14581 atagccatag aacgattagc agcagcaatg gtatttctaa gatcaagcat ttcgtagtgt
    14641 ctttgagtta tatcattagc aaatttgata attttataaa catgaccatt attatcacta
    14701 attggaagat agtttgcttc taaataaaca tctattcctc ccttagctat gcgtctaaaa
    14761 agaccacttc tagcctttcc atctcttaaa tctttccaaa aatcactata ctctgaagaa
    14821 ttaacaactt taggtaaaca aaacatacta tgatgttttc ctttaatctc tgaaagagaa
    14881 tatttcatag ttgttaaaaa attttgattt gcctctagaa taataccatc ggtagtaaac
    14941 tcaattaccg ccatagtatt tccaatagat cttagaatat cccctaaacc attacatttt
    15001 ctttcaagtt gttcaattac ttcagcattg tttttcttag taccaaacat aaaaatctca
    15061 ccttttcaat aataagttgt tgtaagatta tatcatattt atatagcatt gtctacttaa
    15121 aacatattaa tttataagtt aaatatatcc tttaaaccta caataatcat cttaaacccc
    15181 atagcagcga taaatacttg tgctatacga gaaaaaacat gcaaaatcag ctttccaact
    15241 attttttcta tagtggctgc aaaatgaaaa agtataaaca taaaaataaa agctatcatc
    15301 actccaccaa gagcaacatc aagtcctcca tcttctgcta taactataac actcgctaaa
    15361 gttccaggtc caacaagcat aggaaatgcc ataggtatta aactttgtct taaaatttcc
    15421 ttatcattca tattttgata ggagttaaaa tccttagttg caatttttgt tgaaaaaagt
    15481 aaatttttaa tagccattat aataagaacc aaaccaccag aaacccttaa atcatctaac
    15541 gaaactctaa aaatatagtt cataaataaa ggccctgata ataaaaatac taaaactata
    15601 gcaagagctg tataaagaat agttctaaaa agtttttttc ggagcattaa aggcaatcca
    15661 tcgctcatag ataaaaattg agttaaatta ccaaaaggat ttaatatagc aagtaaagta
    15721 attgcagcaa aaaacatcaa ataaagctca gaacccatac tagagaacac aatcaatcct
    15781 tactttttac aaattccaaa gaaatagaat ttacacaatg tcttacattt ttagcagaaa
    15841 atccttctcc ttcaaaaaca tgacccaaat gtccattgca atttacacat acaatctcag
    15901 ttctaatccc atctttatca ggaattcttt taatagctcc ttttatttca tcatcaaaac
    15961 taggccatcc acaacctgat ttgaatttat cttcagattt ataaagtgaa gctccacatt
    16021 gcttacattg atagattcct ttttcataaa aatcattata tttcccacta aaaggaactt
    16081 ctgttccttt gtttaaaatc actttttttt cttcttcatt taattctttc ataacttatt
    16141 ccttgtaaa
//
LOCUS       DAPWAA010000037        15707 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.037, whole genome shotgun sequence.
ACCESSION   DAPWAA010000037 DAPWAA010000000
VERSION     DAPWAA010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15707
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.037"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            7..423
                     /gene="exbB"
                     /locus_tag="RTF91_001105"
     CDS             7..423
                     /gene="exbB"
                     /locus_tag="RTF91_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDZ4943989.1"
                     /translation="MKNYIDLIIFLILGIMAFIAFWCAIERILFFRKINFKNYENQEQ
                     FDDAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLTGNIDVKSIVVGLSLALK
                     ATALGLLVAIPALMAYNALLRKVSLLSNAYKANKNA"
     gene            416..805
                     /gene="exbD"
                     /locus_tag="RTF91_001106"
     CDS             416..805
                     /gene="exbD"
                     /locus_tag="RTF91_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDZ4943990.1"
                     /translation="MLKLPKNEGLNIVPFIDIMLVLLAIVLSISTFIAHGKIQISLPS
                     SENATNISDNEKKLLIIIDEKNTFYLNDKLASLNEVKNAIFSLDKKTIVELKSDKNAK
                     FESFVKIIDFLKAKEHENFQILTEKNK"
     gene            802..1473
                     /locus_tag="RTF91_001107"
     CDS             802..1473
                     /locus_tag="RTF91_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDZ4943991.1"
                     /translation="MKTLFLNHKYQASYITFIIFIPLLFVIFYSNEFFKMEIKNEDSF
                     SLAIKQFTQTNLIKETKSADPIIEPIKPKPQPKAIKTKPEKIQKKVKNIPPHPIPNKT
                     PITPTQEVKTFTKTNNANLNPKITQLTQGKDNHPVLKEIEQAIQQAQFYPRQAKKMRM
                     QGTVKIEFLWKENKTLADLKIIESSGYDLLDKSALESIRKASVFFPSYENDLRIVLPI
                     SYNLS"
     gene            complement(1465..1617)
                     /locus_tag="RTF91_001108"
     CDS             complement(1465..1617)
                     /locus_tag="RTF91_001108"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943992.1"
                     /translation="MQELLELKQKYPDEYEQLKQKDLDDLSKNLNSDLQKEIDYESLG
                     TIDKLT"
     gene            complement(1851..2147)
                     /locus_tag="RTF91_001109"
     CDS             complement(1851..2147)
                     /locus_tag="RTF91_001109"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943993.1"
                     /translation="MNFDGNVNEINVKKESLTEILRDIKNTIDGGLDTTKTTDPQKSD
                     EVNTKKKKDEKDLLEIAKEKGLSALSADEQAKLKASNPQRQRKSRADTAYKRDL"
     gene            complement(2222..2392)
                     /locus_tag="RTF91_001110"
     CDS             complement(2222..2392)
                     /locus_tag="RTF91_001110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4943994.1"
                     /translation="MYFIGSYANYIARDDGAIRLNGEANEFVVNWFEKISGEFFNPNS
                     LINKEELNQCKI"
     gene            2546..3529
                     /locus_tag="RTF91_001111"
     CDS             2546..3529
                     /locus_tag="RTF91_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MnmA/TRMU family protein"
                     /protein_id="HDZ4943995.1"
                     /translation="MKALALFSGGLDSMLAMKLITAQGIKVKALNINIGFGSTSDKSE
                     IMKKRAAMVDADFEMIDVRNSYLQKVLFNPQYGYGKHFNPCIDCHAFMFKTALAMLKE
                     ENASFIITGEVLGQRPMSQRSDAMAKVKKLALDEEDLILRPMCAKNLPLTKPEREGWV
                     DREKLEGISGRSRKRQLELAKIFGLEDFESPGGGCLLTLDSFAKKIRDFIEFDKDMQV
                     NDAQLLKYGRHLRLPNGAKMIIGRNELENELLRNLKTVKYEVIELGNLIGAYSILSTN
                     ADETDLKLALKIALTYTKHKIGEIYELKFKNQSYKSLAFEDKKEINPFFIS"
     gene            complement(3532..5184)
                     /locus_tag="RTF91_001112"
     CDS             complement(3532..5184)
                     /locus_tag="RTF91_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDZ4943996.1"
                     /translation="MKFFKIIFLLMSHICLLQADDSTKMFNLLDKRQQQLYIQKEFNE
                     LEKKQQKKEDGYLKNKDFESKIYIFKQIRFKKNDKLTMQAESILKKYINKPLAVGDIY
                     NIVKELTNFIVSKGYSTSSVTIDEIDLQHDILFLGLEYGFVGEIYLNGDNNTTRLDFG
                     MPLKKGDKFNIYDLDTGIENLNNGARDVKIAVKANENYGYSDIFINLKPKLPDLILDF
                     DNSGYKAKGEYKASTYLSLSNIFNLNDSIRFGFIKGLLKNMSKDRENVYVSSYNLPIQ
                     SYQLSYSLQYSDNRNLIEGYNNSFIRNKDTSLRHKIMLKKILHRTSKDKFSIYANLNI
                     KDDINEINNFRLESSSGRYSSVASGIEYSTVAFGGFLFLNLEYEKGVPFLGSKRDSRD
                     SLYKIEFNKANFNLSYQKNFYTNDDLAFWYQNSFGASYSNEPLLYVNKFLIGDEYTVR
                     GFKESSAALDYGMYSNNTVYLQLFNVPRYLKKLEPFIGIDVGYGGDYLLPNKDFLAGV
                     AFGFRYNLNHFSLNLTASKAIHKSSNMPSETIPIYLRASAFF"
     gene            complement(5185..8103)
                     /locus_tag="RTF91_001113"
     CDS             complement(5185..8103)
                     /locus_tag="RTF91_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002837660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HDZ4943997.1"
                     /translation="MYSNALQSNIKLSKEDIKKLFENGVEYANEHGLNLGQGLAENQT
                     IDQDMILYVVIKQNDKNVLAPMLYFSKETIANNQINSNLAGKAGVDINTGSFNSTLSG
                     IASNGKININASNEIGLHSSNLNAKNINLSANNVNIDTVLGIDEKGSYNSIKKGEIKG
                     NDIVNIDSKKDLNIKNSDISTSANDSKIVLRSQNGNVNIENDYSKLSSFEEVNTDSQK
                     SNTATTINGILNTNIKGSNVGIISNKDVNIIGSNIAANSKIDINANNVNVKDAHEVSK
                     VEINGVYSKSIETSYENANLETSKSVGSNLNSKGDINVNTSGNIAITGSTLQANKSAN
                     LNGKNIVIENGQTQISSSAHSSTSSIVGYKQSSVNTDTSLVSSSKVQSGDLNLNAQKN
                     LTVKGSEFSGGDVNIKADNVDFIAAQNKTHTKNNSFAIGVFADSNLELAGHGLGVNYS
                     FTQDKSSVSPINNTNSITQDGVKSDLFGSAEAGLEFSKTDKISEERTYVSNAVKGSNI
                     NINVNNTLDIGGANFEADKNINLRAGGIASTKYENTKTENNSGFGLYIKERVETSSPI
                     ASAINQSVQNVVAKNNNLDINYGILASQAFANTVNILSNNLVNAGSNETLGLKFNQDK
                     SQSSSENISKINAGGNLNLESTKGNIVLNGVEANGDVINIKAKDDVILNAAKSKNSSS
                     STSFEVAITNQQSAGYHAIDGGTVDKGIEDWVSLSYSTSNEAKFVNTNFNANNININT
                     GKDFVLNGANVKTSNNVVLNVGGNLEVNSLTDTSKFQKYSALLDASVAGGLSSNHLIT
                     GSVVGTLGMGYAKTDKTAIAAQSGISAANEINAHVNGDLKLQGGILNSDSQKGNLVVD
                     GKIKNSEINIHEKSDGATVKLSGGTNKSFGGVIKINDHIDKTSSINSAANINISKNHN
                     ISTDTQNTINTQDHSWAGGAINLKSSASKIKNGISKITGQSSNSDGPYVNESTQTTRL
                     "
     gene            complement(8344..8982)
                     /locus_tag="RTF91_001114"
                     /pseudo
     CDS             complement(8344..8982)
                     /locus_tag="RTF91_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807498.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
     gene            complement(10228..10773)
                     /locus_tag="RTF91_001115"
                     /pseudo
     CDS             complement(10228..10773)
                     /locus_tag="RTF91_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843395.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
     gene            complement(10942..12030)
                     /gene="aroC"
                     /locus_tag="RTF91_001116"
     CDS             complement(10942..12030)
                     /gene="aroC"
                     /locus_tag="RTF91_001116"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDZ4943998.1"
                     /translation="MNTFGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELD
                     KRKGGGKFTTPRKEGDKVQVLSGVFEGYTTGHPIAIVVFNENAHSKDYDNLKDLFRPA
                     HADFTYFYKYGVRDHRGGGRSSARESVARVAGGAVASMLLREFSICVQSGVFGVGAFV
                     SNLKEEEFDFEFAKESEIFCLDPKLENDFKNEILSARNSKDSVGAAVFTKVSGMLVGL
                     GEVLYDKLDSKLAHALMGVNAVKAVEIGEGINSSKMRGSQNNDALKDGKFLSNHSGGI
                     LGGISNGEDLILKTYFKPTPSIFAKQESMDKFGNNLEFELKGRHDPCVGIRGSVVASA
                     MVRLVLADCLLLNASANLNNLKSAYGLK"
     gene            complement(12030..12704)
                     /locus_tag="RTF91_001117"
     CDS             complement(12030..12704)
                     /locus_tag="RTF91_001117"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDZ4943999.1"
                     /translation="MKNIEKLEQNLTYEFKDKNLLMHALTHKSFKKSYNNERLEFLGD
                     AVLDLVVGEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSVAEENN
                     GGKEKSSILSDALEAIIGAIHLEAGFEFAKTIALRLIEKNFPQIDAKILIKDYKTKLQ
                     EITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKEIARAIAGSKKEAQQMAAKIAL
                     EKLGAL"
     gene            complement(12691..13131)
                     /gene="rnhA"
                     /locus_tag="RTF91_001118"
     CDS             complement(12691..13131)
                     /gene="rnhA"
                     /locus_tag="RTF91_001118"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDZ4944000.1"
                     /translation="MKHIKIYTDGSCLNNPGFGGWAYILCYKEYQKEGFGAEANTTNN
                     RMELMAIIESLKVLKEPCEISLFTDSNLMVQSINEWLEGWIKKDFKGKKNIDLWKEYI
                     KVAKSHKIKAFWIKAHNGHLENERCDTLAREAALKIARENDEKH"
     gene            complement(13118..14104)
                     /locus_tag="RTF91_001119"
     CDS             complement(13118..14104)
                     /locus_tag="RTF91_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944001.1"
                     /translation="MDFFFVEYRDPLVGLIILTILVFVVAVANYIWKIFASKDEEQKL
                     EKFIKKFEMDNAHKELLRNSSLSFGNLSFLAEIFTKSGEFEKATQIYLIALEKCKDKQ
                     EREFIFLALAKVYFKAGFLERAKEVLLQVLKLRPRNIQALKLLKIVYLKLRSYKENLE
                     LLECLFELNEDVQKEHDFIKALELCTFNISDEEKKKKLLEFKIKDNPMLGRLIFEKYH
                     MFLGQNFFDICDLLYRENETFNLENQDFLEFFYALGKISKHDGTHQFVFKNSNFKMLK
                     ILKDNSFNAGLEFSYRCSECKNVMPLFFYHCPVCYEFNTCKIIYEVKNNETY"
     gene            14175..>15707
                     /locus_tag="RTF91_001120"
     CDS             14175..>15707
                     /locus_tag="RTF91_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDZ4944002.1"
                     /translation="MITKESIENLSQRLNIVDIIENYIEVKKQGSSFVCICPFHADKN
                     PSMHINPAKGFYHCFACKAGGDAFKFIMDYEKLSFADAVEKAASLSNFTLSYTKEKQE
                     NKKELKSILPSLNAYFKDNLKHHKEVLIYLYQRALNDKDIAKFELGFAGASEDSIRLL
                     QNQKIPLEDAMSVGALKKDENNEFYSSFIWRITFPIYDQKDLLVGFGGRTLNPNIPAK
                     YVNSPQNVLFDKSRIFYAFNIAKENIAKKKEIIVCEGYMDAIAFHKAGFDNAVAVLGT
                     ALTEHHLPLIRRYEAKVILCFDNDEAGLKAATRSAFLLSTNKIDGKVAILQGGKDPAE
                     LVAKNESAKLHDILDKGIELGEFYIRRLISAYSINSALDKQKALETIQKYTFNLEPLV
                     ANSYTNLVSNLLKVDEKFIILSQNPKKPIQTPLISQNRYNFHKEKIHIAELELIAFLK
                     QHPDICSDFKQISDSVCFKHKILLDKILEKKGYEDSDIREFESKNIRKKLSYSEFLLG
                     ICK"
BASE COUNT         5485 a         2649 c         1873 g         5700 t
ORIGIN      
        1 gaatttctga aaaattatat cgacttaatt atctttttaa ttcttggaat tatggcattt
       61 atagcctttt ggtgtgcgat agaaagaata ctatttttta gaaaaattaa ctttaaaaat
      121 tatgaaaatc aagagcaatt tgatgatgca attagtgaaa atttaaccac tatatatatt
      181 atttattcta atgcccctta tataggactt ttaggtactg taataggcat catggttaca
      241 ttttatgaaa tgggcttaac aggcaatata gatgtcaaat ccatagttgt aggactttcc
      301 ttagctctta aagctacagc tttaggactt ctggttgcta ttcctgcttt aatggcttac
      361 aatgcattac ttagaaaagt ttctctccta agcaatgctt ataaggcaaa taaaaatgct
      421 taaactaccc aaaaatgaag gtttaaatat agttccattc atagatatta tgcttgtttt
      481 acttgctata gtacttagca tttcaacctt tattgcacat ggaaaaattc aaatttcgct
      541 tccttcaagt gaaaatgcta ccaatataag tgataatgaa aaaaaacttc ttataatcat
      601 agatgaaaaa aatacttttt atttaaatga caaattagcc agtttaaacg aagttaaaaa
      661 tgctattttt tcacttgata aaaaaaccat agtagaacta aaaagcgaca aaaatgctaa
      721 atttgaaagc tttgtaaaaa ttatagattt tttaaaagcc aaagaacatg aaaattttca
      781 gattcttact gagaaaaaca aatgaaaact ttatttttaa atcataaata tcaagcttct
      841 tatataactt ttataatctt tataccttta ctttttgtca ttttttattc aaatgaattt
      901 tttaaaatgg aaatcaaaaa tgaagattcc ttttctttag caataaaaca atttacacaa
      961 accaatctaa taaaagagac taaatcagca gaccctatta tagaaccaat caaaccaaaa
     1021 cctcagccaa aggctattaa aacaaaacct gagaaaattc aaaaaaaggt gaaaaacata
     1081 ccgccacatc caataccaaa taaaacacct ataacaccga ctcaagaagt taaaactttt
     1141 acaaaaacaa acaatgcaaa tcttaatccc aagattaccc aattaacaca aggaaaagat
     1201 aatcatcctg tattaaagga aatcgaacaa gctatacaac aagcacaatt ttatccaaga
     1261 caagcaaaaa aaatgcgtat gcaaggaact gtaaagatag aatttttatg gaaagaaaat
     1321 aaaactctag cagatttaaa aatcattgaa agttcaggat atgatttgct ggataaaagt
     1381 gctttagaaa gcatacgcaa agcttctgtt ttttttcctt cttatgaaaa cgatttaagg
     1441 atagttttac ctataagcta taatttaagt taatttatca atagtaccca aactctcata
     1501 atctatttct ttttgtaaat ccgaatttaa atttttactc aaatcatcta aatctttttg
     1561 ctttaactgc tcgtattcat caggatattt ttgctttaat tccaaaagtt cttgcatatt
     1621 taagcactaa atccttgttc taaagcttta tctttaagac tggaattttc ttgttcatct
     1681 tgagcatcat caatagcatt ttgcattctt ttgagttttt ctaataattg cttacttatg
     1741 agattttcgt tatcaaatat agcttgtgtc ttggctaaaa tctgctcttt agaaccatta
     1801 ctttctaaaa tagtaatctt tccgtcggca ttttttcaaa gaaaagcatt ctataagtct
     1861 cttttatacg cggtatctgc tctactttta cgctgccttt gtgggttact tgctttaagt
     1921 tttgcttgtt catctgcact tagagcactt agtccttttt ctttggcaat ttcaagcaaa
     1981 tctttttcat cctttttctt tttagtgttt acctcatcac ttttttgcgg atctgtggtt
     2041 ttagtagtat ccaaaccacc atctattgta ttttttatat ctcttaaaat ttctgtcaaa
     2101 ctttcttttt tcacattaat ttcattgaca tttccatcaa aattcacatc tttttctata
     2161 gcaaaattaa gtctagtttg taaatttgca tcttaactta acccattttc acctttaaaa
     2221 gctaaatttt gcattgattt aattcttctt tattaattaa tgaatttgga ttaaaaaatt
     2281 caccgcttat tttttcaaac caattaacaa caaattcatt agcttcacca ttaagcctta
     2341 ttgcaccatc atctctagca atataattag cataagaacc aataaaatac aatagagaat
     2401 aatttcctca tagtaaactt ccaaaaaaat aaaaatactt tataatcgcg atcttaaaat
     2461 tatttgatat aattataaat tttgatatca acaaaaaatc aaatttattt gtactaaaaa
     2521 ttaaatttta aaaaaggaaa acataatgaa agcactggct ctttttagcg gtggacttga
     2581 tagtatgctt gcgatgaaac tcatcactgc acaaggcata aaagttaaag ctctaaatat
     2641 caacataggt tttggaagca cgagtgataa aagcgagatt atgaaaaagc gtgcagcaat
     2701 ggtagatgct gattttgaaa tgatagatgt aagaaattcc tatcttcaaa aagtactttt
     2761 taacccgcag tatggttatg gaaaacattt taatccttgt atagattgtc acgcttttat
     2821 gtttaaaact gctcttgcta tgttaaaaga agagaatgca agctttatca ttacaggaga
     2881 agtcttagga caacgcccta tgagtcaaag aagtgatgct atggcaaagg ttaaaaaact
     2941 tgctcttgat gaggaagatc taatcttgcg tcctatgtgt gcaaaaaatt tacctctaac
     3001 taaacctgaa agagaaggtt gggtagatag agaaaaacta gaaggcatta gtggaagaag
     3061 tcgcaaaaga caacttgaac ttgccaaaat ttttggctta gaagactttg aaagcccagg
     3121 tggaggttgc ttgctaactc ttgatagttt tgctaaaaaa attcgagatt tcatagaatt
     3181 tgataaagat atgcaagtta atgacgcaca acttttaaaa tatggtcgtc atttaagatt
     3241 gccaaatgga gctaaaatga tcataggacg taacgaatta gaaaatgagc ttttaagaaa
     3301 tttaaaaacg gtaaagtatg aagtgataga acttggaaat ttaatcggtg cttattcaat
     3361 acttagtaca aatgcagatg aaacagactt aaaacttgct ttaaaaattg ctttaactta
     3421 tactaaacat aagataggtg aaatttatga acttaaattt aaaaaccaaa gctataaaag
     3481 tttagctttt gaagataaaa aagaaatcaa tccatttttt atttcttaaa actaaaaaaa
     3541 tgcagaagct ctaagataaa tgggaattgt ttcacttggc atattggaag atttatgtat
     3601 agctttagaa gctgttaaat ttaaagagaa atgattcaaa ttatatctaa agccaaaagc
     3661 gactccagct aagaaatctt tattgggcaa aagataatct ccaccataac ctacatctat
     3721 tccaataaaa ggttctagct tttttaaata tctaggaaca ttgaataatt gcaaataaac
     3781 tgtattattg ctatacattc cataatcaag agcagcagag ctttccttaa atcctctaac
     3841 cgtatattca tcacctatta aaaatttatt aacatatagc aagggttcat tagaataact
     3901 cgcaccaaaa ctattctgat accaaaatgc taaatcatca tttgtataaa aatttttttg
     3961 ataacttaaa ttaaaattcg ctttattaaa ttcaatttta tataaagaat ctctagaatc
     4021 ccttttagaa cctaaaaacg gaactccttt ttcatattct aaatttaaaa acaaaaatcc
     4081 accaaatgct accgtagaat actcaattcc gctagcaaca cttgaatatc taccacttga
     4141 actctctaat cgaaaattat taatttcatt aatatcatct ttaatattta aattagcata
     4201 aattgaaaat ttatctttac ttgtgcgatg taaaatcttt tttaacataa ttttatgtct
     4261 taagcttgta tctttattgc gtataaaaga attattatac ccttctatca aatttctatt
     4321 atcactgtat tgcaaagaat aagataactg atagctttgt ataggcaaat tataacttga
     4381 tacataaaca ttttcccgat ctttactcat atttttcaat aatcctttaa taaaaccaaa
     4441 tcgtatagaa tcatttagat taaaaatatt acttaaagaa agatatgtgc tagctttata
     4501 ttctcctttg gctttatagc cactattatc gaagtctaat atcagatcag gtagctttgg
     4561 tttaagatta ataaatatat cagaataacc ataattttca ttagccttta ccgcaatctt
     4621 aacatccctt gcaccattat ttagattttc tatccctgta tccaaatcat aaatattaaa
     4681 cttatcacct ttttttaaag gcatgccaaa atctaatctt gttgtattat tatctccatt
     4741 aagatatatc tctcctacaa aaccatattc taaaccaaga aaaagtatat catgttgcaa
     4801 atctatctca tcaatagtta cactagaagt tgaataacct tttgaaacaa taaaattggt
     4861 aagttcttta actatattat aaatatcacc aaccgctaaa ggtttgttta tatatttttt
     4921 taaaatgctt tcagcttgca tggtaagctt atcgtttttt ttaaatcgaa tttgtttaaa
     4981 aatataaatt ttagattcaa agtctttatt ttttaaatac ccatcttctt ttttctgttg
     5041 ctttttttct aactcattaa attctttttg tatatataac tgctgttgtc ttttatctag
     5101 caaattaaac atttttgtag agtcatctgc ttgcaataag cagatatgac tcataagcaa
     5161 aaaaatgatt ttaaaaaatt tcacttataa ccttgtagtt tgagtgcttt catttacata
     5221 aggcccatct gaattggacg attgaccagt aatcttactt atcccatttt ttattttaga
     5281 agctgaagat ttgagattta tagcacctcc tgcccaagaa tgatcttgtg tatttatagt
     5341 attttgagta tctgtactta tattgtgatt tttactgata ttgatatttg ctgcagaatt
     5401 aatactactt gttttatcaa tatgatcatt tatcttaatc actccaccaa aacttttatt
     5461 tgtgccaccg cttaatttta ccgtagctcc atcacttttc tcatgaatat ttatctcaga
     5521 atttttaatt tttccatcaa caactaaatt tcctttttgg ctatcagaat ttaaaatacc
     5581 accttgcaac tttaaatctc cattaacatg agcattaatt tcatttgctg cactaatacc
     5641 actttgagct gcgattgctg ttttatctgt tttagcgtat cccataccta aagttcctac
     5701 aacgctaccc gtaataagat gattacttga taaacctcca gctactgatg catctaacaa
     5761 agcactatat ttttggaact tagaagtatc ggttaaagaa ttaacttcca aatttccacc
     5821 tacatttaaa acaacattat tagaagtttt aacatttgct ccgtttaaaa caaaatcttt
     5881 accggtatta atattgatat tattggcatt aaaattagta ttgacaaatt tagcttcatt
     5941 cgatgtagaa tatgataaac taacccaatc ttcaatgcct ttatctacag ttccaccatc
     6001 aattgcatga tatcctgcac tttgttgatt agttattgcg acttcaaaag aagtactaga
     6061 tgaagaattt ttagatttag cagcatttag aataacatca tcctttgctt taatattaat
     6121 aacatcgcca ttagcctcaa ctccgtttaa aacaatattt ccttttgtgc tttctaaatt
     6181 taaattacca cctgcattaa ttttagaaat attttcacta gaactttgac ttttatcttg
     6241 attaaatttc aaacctaaag tttcgttaga gcctgcattt acaagattat tacttagtat
     6301 attaacagta ttagcaaaag cttgagaagc tagtattcca tagtttatat ccaagttatt
     6361 attcttagca acaacatttt gaactgattg attaatagca gaagctatag ggctactagt
     6421 ttcgactctt tctttaatat ataagccaaa accactatta ttctctgttt tagtattctc
     6481 atatttagta cttgcaatcc cccctgctct taaattaata tttttatctg cttcaaaatt
     6541 agctccacct atatccaaag tattatttac attaatatta atattcgaac ccttaactgc
     6601 attagaaaca taagtacgct cctcgcttat tttgtcagtt ttagaaaatt ccaaaccagc
     6661 ttctgcactt ccaaaaagat ccgatttaac tccgtcttgt gtaatgctat tagtgttatt
     6721 tattggacta acacttgatt tatcctgtgt aaaactataa tttacaccaa ggccatgtcc
     6781 agccaattct aaattactat cagcaaaaac tccaatagca aatgagttat tttttgtgtg
     6841 tgttttattt tgtgctgcta taaaatcaac attatctgcc ttaatattaa catcacctcc
     6901 gctaaattca ctacctttga cagttagatt tttttgtgca tttaaattta aatcacctga
     6961 ttgaactttc gatgaagata ccaaagaagt atctgtattt acagaacttt gtttatagcc
     7021 aacaattgag cttgttgaag aatgggcaga acttgaaatt tgagtttgtc cattttctat
     7081 tacgatattt tttccattta aatttgcgga tttgtttgct tgcaaagtcg aacctgtaat
     7141 cgctatatta ccacttgtat taacattaat atcacccttt gaatttaaat tactacctac
     7201 tgattttgaa gtttctaaat tagcattttc ataactagtc tctatcgatt ttgaatacac
     7261 gccgttaatt tcaaccttac taacctcatg tgcatcttta acattgacat tattagcatt
     7321 aatatcaatt ttagaattag cagcgatatt actgcctata atattaacat ctttattaga
     7381 gataatcccc acattagaac ctttgatatt tgtgtttaaa attccattta ttgttgttgc
     7441 ggtatttgat ttttgactat ctgtattaac ttcttcaaac gaagataact tagaataatc
     7501 attttctata ttcacattac cattttgaga ccttaaaaca attttagaat cattagcact
     7561 agtagaaata tcactatttt ttatatttaa atctttctta gaatcaatat taacaatatc
     7621 attccctttg atttctcctt ttttaattga attataagaa cctttttcat ctatacctaa
     7681 aacagtatct atattaacat tattcgcact tagatttata ttttttgcgt ttaaatttga
     7741 actatgtaaa ccaatttcgt tgctagcatt gatattaatc ttaccatttg aggctatacc
     7801 gcttagcgta gaattaaatg accctgtatt aatatctaca cctgcttttc ctgcgagatt
     7861 ggaattaatt tgattatttg caatcgtttc tttagaaaaa taaagcatag gagctaatac
     7921 atttttatca ttttgcttga ttactacata taaaatcata tcttgatcaa tggtttgatt
     7981 ttctgccaaa ccttgcccta aatttaaacc atgttcattg gcatattcta ctccattttc
     8041 aaacaatttt ttaatatctt ctttacttaa ttttatatta gattgcaatg catttgagta
     8101 cattgtatta ataagctgat tttcaaaaaa agaatctcct attacaacaa atttatgcaa
     8161 atttttattt ttaaattgat ttacaacatt taaaaatcca aaatactcat ctttgtttat
     8221 gatcaaagta tttgtggtat actcataaga aatatcatca attttcttat tctcaagtgt
     8281 aaataaacca gaattagtga tatcaggtat agaatttaaa attaaatctt gactatttat
     8341 tgcttttttt aaatctgaat caactaaagc aaaattttta cctagattat tcactaagcc
     8401 ttgattatac tctttagaat taagttctaa tttaccattt gatgtaatga tagcttcaga
     8461 ttttgcctta aaaataattt tagcatcaag attccattct ttttgatcag gaataaatct
     8521 ttttgaagca tagtcactac caaacaataa agaaaaatat tggtttaaag cggaattttt
     8581 ggttgctgca tccttaagag cattccatgc tgattctctt tgatgatctt tcactttatt
     8641 gttagaaaaa tactttaaag catcaagtaa gctttcatga tttctcaaat aacgagccga
     8701 gttagtattc caagttccaa gatattcttt ggcaaaaaat ccatcaactt taatttgctc
     8761 taaaatttct tttagagaaa tttctttact taaagacttg ttatctacac tcccaaaaga
     8821 tacaatattt ccttgagcaa ggatttttcc attattattt atttgcctag aattatcttt
     8881 tgattgtatg ttgatattaa tattcttacc agcttgtata gaggcttgct tactgtctaa
     8941 taaattatta tattttacaa tatcagtaat tcctacttcc atattccatc gtttaaaaag
     9001 agtatcacca taattaacct gaccaaaacc ctgggaagat tcggttgtag tattaagcac
     9061 tcctgttaaa tttgcattat tatttaaggt atttgcttca atattaacat ctttatctgc
     9121 aaaaattaaa gcattattat taatcgtatt ggcatctaaa tataaattat ttaaactgtt
     9181 aaaagttgaa ttgtttgtaa gtgttgtagc atgtgctcta agattattgt ttgaaaataa
     9241 ataaccatca ttaacaatat ctttatcagc ataaatattt aattcttttc cactagcaac
     9301 aagattttta atatgaatat tttttgcatc aagctctatc gaagaagcat tttcaagctt
     9361 tgaattgata tctaaattgt ttaaactttt tatataaagt aaattattcg catataaatc
     9421 tccataattt aaagttagat ctttattagc ttgtattttg atatcatttt gacttaaaac
     9481 cttaccatta ttaataaaat tattatcatt gagtgttaca aatatatctt tatttgccga
     9541 gacttctcct tgattgtcaa aagaatttgt aacaatttta atatcattta aagcattaat
     9601 aaacccaaaa ttgctagttt tatcttgagt atttaaaact aaattatcag taaaaatttt
     9661 tgaattttct tgatttatct tgaaaagatc ttttgtttct ttactaagat ttacttgttt
     9721 tgcattttca aagctattag cattgatttg aatttgttgg cctttataga gtccttcatt
     9781 tataattttt ccatctgctt tcaaatcaat tttatctgca ttaatcaaag atgttttaat
     9841 atctttagca tctattttaa tacttccctt tgcatttaca cctatagcct gaaattctgc
     9901 tttatcctta acttttacta taacatcctc aagtccacgt attattccac tatgccttac
     9961 accaacaccc tcttctgtac taacaagtgt aactgtattt gcatacatag aacctagatt
    10021 cctaccatca atcccataag caattttatt atccacttgt cttgaggcaa gaattttagg
    10081 aatattgcca ttgcttaaat ctactttatt aagtccggct ataaaattaa tattagataa
    10141 atgttttcct gcttgataat gagcaatatt accagcgata tctatactac gactaattac
    10201 attaaaataa tctccatcaa ccgcaacacc tttatctcca atagatattt taccattact
    10261 ttttacatct acaatattcc cattaaattg acctgtagta aaagtcgcgc ctgttgtatt
    10321 taaaaaagac gccccattaa gactaaaacc attttcattg gcaaaaatta aattagcact
    10381 ttttccaaac acctcaacag caccattaat attagaagct tgtttgcttg aaatttcatt
    10441 aataatagta tctgcatttt gttttaaatt tggattttta tttacccatc caccaatttg
    10501 agaattacca tcgactaagc tattattaaa aatcacccca tctttaacat taaagtcttc
    10561 aaattgatta tgtgaaaccc cattttgatt tggattttta atattaatca catctgtttt
    10621 attgcttgat tgcgtaaaat ctgctgtttt tgaaacaata atattaccat ttctctgacg
    10681 taaatctgct gataataata cgcaaggaaa caaagcacca agaagcgtta agtttaacga
    10741 taaacgaaca attttctttt tattaaattc cataatatcc ctcctaaaat aatgatattt
    10801 caattattat atattaaaaa gtttaattta ttcttttttt acataattta gatataaaag
    10861 tattaaaagt tttaaaaaac aaacgatatt gtgtataatc ttttcaaaat attgcaatta
    10921 agcccatgaa aatgggcttt tttattttaa tccataggca ctttttaagt tatttaaatt
    10981 cgcacttgca tttaaaagca aacaatcagc caaaaccaaa cgcaccatag cgctagctac
    11041 aacacttcct ctaattccta cacaaggatc atgtctacct tttagctcaa attccaaatt
    11101 attaccaaat ttatccatac tttcttgctt ggcaaaaata gaaggagtag gcttaaaata
    11161 agtttttaaa ataagatctt ccccatttga aattcctcct aaaattcctc cactatgatt
    11221 acttaaaaac ttaccatctt ttaaagcatc attgttttgt gagccacgca ttttacttga
    11281 gttaattcct tcacctattt caaccgcttt aacagcatta acccccatta aagcatgagc
    11341 taatttagaa tctaacttat cataaagaac ctctccaagc cctacaagca taccactaac
    11401 ttttgtaaaa acagcagcac ctacgctatc tttcgaattt ctagcactta aaatttcatt
    11461 tttaaagtca ttttctagtt ttggatctaa acaaaaaatt tcactttcct tagcaaattc
    11521 aaaatcaaac tcttcttctt ttaaatttga tacaaaagct cctactccaa aaacaccgct
    11581 ttgaacacaa atgctaaatt cacgtaaaag catgcttgca actgcaccac cggctactct
    11641 agcaacactt tctctagcac tggatctacc cccgcctcta tgatctctta cgccatattt
    11701 ataaaaataa gtaaaatctg catgagcggg acgaaataaa tcttttaaat tgtcataatc
    11761 tttagaatgt gcgttttcat taaaaaccac tatagctatg ggatgacctg ttgtatatcc
    11821 ttcaaaaacc ccacttaaaa cctgaacttt atcgccttct tttcttggcg ttgtaaattt
    11881 acctccacct ttgcgtttat caagctcatt ttgcaaaaat tcttcatcaa atttaacccc
    11941 agcaggcatt ccatcgataa tgcacccaac agctacgcca tgagactcac caaagcttgt
    12001 aaattttaat cttgtaccaa aagtattcac tataaagctc ctaatttttc aagtgcaatt
    12061 tttgccgcca tctgctgtgc ttctttttta cttcctgcaa tagctcttgc aatttcttta
    12121 ccatcaagca ttaaagcgat ttcaaattgc tttaaatgat caggaccaaa ggcacgcact
    12181 gtttcatact gcggagtttg tccaattttt ccctgtgtaa tctcttgtaa ttttgtttta
    12241 taatctttta taagaatttt tgcatcaatt tgagggaaat ttttttctat aagtcttaaa
    12301 gcaatagttt ttgcaaactc aaaccctgct tctaaatgta tagcccctat aatggcttct
    12361 aatgcatctg aaagtataga ggatttttct ttacccccat tgttttcctc agcaacactc
    12421 atgaaaataa aatcacccaa atttaaacta tttgcaattt ttgcaaaaga tttttcattt
    12481 actaaagctg ctctaagctt agacaaatcc ccttcagcat ctttggcaaa tttatgaaaa
    12541 agatattcac ctacaaccag atcaagtaca gcatcaccca aaaattccaa gcgttcgttg
    12601 ttataagatt ttttaaaact tttatgagtt aaagcatgca taagaagatt tttatcctta
    12661 aattcataag ttaaattttg ctctagtttt tcaatgtttt tcatcatttt cccttgcaat
    12721 ttttaaagca gcttcacgtg ctaatgtatc gcatctttca ttttccaaat gtccattatg
    12781 tgcttttatc caaaaagcct taatcttatg agattttgcc actttaatat attctttcca
    12841 taaatctata ttctttttac ccttaaaatc cttttttatc catccttcta gccattcatt
    12901 aatactttga accattagat tagaatctgt aaaaagcgaa atttcgcaag gctcttttaa
    12961 aacctttaaa gattcaatga ttgccattag ctccattcta ttattagtcg tattagcctc
    13021 agcaccaaaa ccttcctttt gatattcctt ataacacaaa atataagccc atccaccaaa
    13081 acctggatta ttaagacaag agccatctgt ataaatttta atatgtttca ttatttttca
    13141 cttcgtaaat aattttacag gtattaaact cataacaaac agggcagtgg taaaaaaaca
    13201 aaggcataac atttttacac tcagaacaac gatatgaaaa ttctaatccc gcattaaaag
    13261 aattatcttt taaaattttt aacattttga aattagaatt tttaaaaaca aactggtgtg
    13321 taccatcatg ctttgaaatt ttacccaaag cataaaaaaa ttctaaaaaa tcttgatttt
    13381 ctagattaaa tgtttcgttt tccctataaa gcaaatcaca aatatcaaaa aagttttgcc
    13441 ctaaaaacat atgatatttt tcaaaaatca aacgccccaa catagggtta tcttttattt
    13501 taaattctaa aagttttttc tttttttctt catcgctaat attaaaagtg caaagctcta
    13561 aagctttgat aaaatcatgc tctttttgca catcttcatt aagttcaaaa agacattcta
    13621 aaagttctaa attttcttta taagaacgaa gttttaaata aacaattttt aaaagtttta
    13681 aggcttgtat atttcttgga cgaagtttta aaacttgcaa taacacttct tttgcacgct
    13741 ccaaaaatcc tgctttaaaa taaacttttg ctaaagcaag aaaaataaat tctctctctt
    13801 gtttatcttt acatttctca agagcgatca aataaatttg agttgctttt tcaaattctc
    13861 cacttttagt aaaaatttca gctaaaaaac ttaaatttcc aaaactcaag ctgctatttc
    13921 ttaataactc tttatgagcg ttatccattt caaatttttt tataaatttt tcaagctttt
    13981 gttcttcgtc tttgctagca aatattttcc aaatataatt agcaacagct acaacaaata
    14041 ctaaaatggt taaaattata agccccacta aagggtctct gtattctaca aagaaaaaat
    14101 ccatagtctc gctctaaaaa attttatgcc aaattatagc caaatctttg tataatttta
    14161 acaaggtttg taaaatgata actaaagaaa gtatagaaaa tttatcccaa agacttaata
    14221 ttgttgatat tatagaaaat tatatcgaag taaaaaaaca aggctctagt tttgtttgca
    14281 tttgtccttt ccatgcagat aaaaaccctt ctatgcacat caaccctgcc aaaggttttt
    14341 atcattgttt tgcttgtaaa gctggtggag atgcttttaa atttataatg gattatgaaa
    14401 aattaagttt tgctgatgca gttgaaaaag ctgcaagcct tagtaatttt actttaagct
    14461 atacaaaaga aaaacaagaa aacaaaaaag aactaaaatc tatactacca agtttaaatg
    14521 cgtattttaa agataatctc aaacaccaca aagaagtctt aatttacctt taccaaagag
    14581 ctttaaatga taaggacata gctaaatttg aattaggttt tgcaggagca agtgaagata
    14641 gtataagatt attacaaaat caaaaaattc ctttagaaga tgctatgagc gttggcgcct
    14701 taaaaaagga tgaaaataat gaattttact caagtttcat atggcgcata acctttccaa
    14761 tctacgatca gaaagactta ttagtagggt ttggagggcg tactttaaat cctaatatac
    14821 cagcaaaata tgtaaattca cctcaaaatg tactttttga taaaagtaga attttttatg
    14881 cttttaatat cgctaaagaa aatatagcca aaaaaaaaga aataatagta tgtgaaggct
    14941 atatggatgc aatagctttt cacaaagcag gatttgacaa tgctgtagca gtccttggaa
    15001 cagcattaac tgaacatcat ttacccttaa tccgtcgtta tgaagcaaaa gtgattttat
    15061 gttttgacaa tgatgaagca ggattaaaag ctgcaacacg atcagcattt ttattaagca
    15121 caaataaaat agacggtaaa gtggcaattt tacaaggtgg aaaagatcct gccgaactcg
    15181 tagcaaaaaa tgaaagtgca aaacttcatg atatactcga taaaggaata gagcttggtg
    15241 aattttacat cagacgctta atatctgctt attccataaa ttctgctctt gacaaacaaa
    15301 aagctttaga aactatacaa aaatacacct ttaatcttga acctttagta gcgaattcct
    15361 ataccaatct agtttcaaat ttattaaaag tagatgaaaa atttatcatc ttatcacaaa
    15421 atccaaaaaa acctatacaa acccctttaa tttctcaaaa tagatacaat tttcataaag
    15481 aaaaaattca cattgcagaa ttagaactta tagctttttt aaaacaacat ccagatatat
    15541 gtagtgattt taaacaaatt agcgatagtg tttgttttaa gcataaaatt ctattggata
    15601 aaattttgga aaaaaagggt tatgaagata gtgatattag agaatttgaa agtaaaaata
    15661 ttcgaaaaaa attaagctat agcgaatttt tattgggtat ttgcaag
//
LOCUS       DAPWAA010000038        15042 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.038, whole genome shotgun sequence.
ACCESSION   DAPWAA010000038 DAPWAA010000000
VERSION     DAPWAA010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15042)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15042)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15042
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.038"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            41..1222
                     /locus_tag="RTF91_001121"
     CDS             41..1222
                     /locus_tag="RTF91_001121"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifS family cysteine desulfurase"
                     /protein_id="HDZ4944003.1"
                     /translation="MKAYLDNNATTMLDPNAYELMLPFLKDMYGNPNSLHQYGSATHP
                     ALREALDKLYVGLGANDLDDIVVTSCATESINWVLKSVYFDHILDKERNEVIISSVEH
                     PAVTGAAYFLKSLGVKVIELPVNEEGVSTVEDLRKVISDKTALVSVMWANNETGMIFD
                     IKAMVELAHEFGALFHTDATQAVGKIKVNLTQVGVDFASFSAHKFHGPKGVGGLFIKK
                     GLKLTPLLHGGEHMGGRRSGTLNVPYIVAMGEALRIANTMLDFEDSHIRRLRDKLENQ
                     ILALPDTTVVGKREHRVPNTILASIKGVEGEAMLWDLNKNGIAASTGSACASEALESN
                     PIMEAIGAEHDLAHTALRLSLSRFNTEEEIDYAAKQIKNATERLRAISCTYAYNPNNY
                     K"
     gene            1232..2203
                     /locus_tag="RTF91_001122"
     CDS             1232..2203
                     /locus_tag="RTF91_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein
                     NifU"
                     /protein_id="HDZ4944004.1"
                     /translation="MGKNSLIGGSIWDEYSQKVQDRMNNPQHMGEFNEEDAKARNAKL
                     IVADFGAESCGDAVRLFWLVDEKTDKIIDAKFKSFGCGTAIASSDTMVDLCIGKTVDE
                     AVKITNLDVEFAMRDNPETPAVPPQKMHCSVMAYDVIKQAAAHYKGISPEDFEDQIIV
                     CECARVSLGTIKEVIKLNDLHSVEEITQYTKAGAFCKSCIKPGGHEKRDYYLVDILAE
                     TRAEIDREKLKSVMKSDVAFDEMTLVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQK
                     AESAAIDVYIRYLGACSGCSSGSGATLYAIETILQEELSPNIRVMPV"
     gene            complement(2227..4110)
                     /locus_tag="RTF91_001123"
     CDS             complement(2227..4110)
                     /locus_tag="RTF91_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDZ4944005.1"
                     /translation="MKKIIFGLCFFILYLGAQEFKFIDASISKEDKGIYALVEKYVDL
                     NNQIREFKKNNDENSSTFNGILSEFKKDKKTILAKIPDMIVGQKIDEEAVARFLKAKE
                     KFLDIQKKNINKPYVYTDATLNLIYFNIVESFYSSLFEMEKLFKNTASSKDLIATIDK
                     AMENLQNSSNVSLDSFKSKITNPEELEKITLKERYISNAVDSYSEILKYLRSNADLLE
                     SNYIFSLLELQVWIDRINEAVGVSFINVGKIVISALVLVFFISLRRFFANIVYFFLVQ
                     LFYRNKNDVDDIKVIFIENIKKPVGFLLIIYATSLCLTIAIYPAPLSINLSNFFHIVY
                     AVLIAWLILRMLDGYGVVLVSKLAQKSGKKEVVNLIIKILYFVIIVIALLYILAQLGF
                     NISAIIASLGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVETG
                     LRKTTIRTFDNCLVFLPNSTIMGANIKNWSKRRMGRHVRMYLGVGYDATPEKLEQCVK
                     DLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSEFADSSI
                     NIELYFYTKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQTK
                     AVK"
     gene            complement(4107..4742)
                     /locus_tag="RTF91_001124"
     CDS             complement(4107..4742)
                     /locus_tag="RTF91_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HDZ4944006.1"
                     /translation="MENLISGAIKFMQEDFKEHEELFESLKNRQNPHTLFIGCSDSRV
                     IPNLITNTGPGELFVIRNIANIIPPYRVGEDYLATTSAIEYALNSLHIKNIVVCGHSN
                     CGGCNALYCSDEELNKIPNVKKWLTMLDPIKKDVMIFARDDLAMRSWLTEKLNLVNSL
                     QNILTYPGVQEALDEGKLEVHAWYYIIETGEIYEYDFKAKIFTLIQDRKVQ"
     gene            4899..5594
                     /locus_tag="RTF91_001125"
     CDS             4899..5594
                     /locus_tag="RTF91_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDZ4944007.1"
                     /translation="MSLYDRDYSRSKEFENTRSSELSIFIKQTYQLFAASLLAATVGA
                     YVGIFALASFFIQSQVTFWILFAVEIGLLFALQWKKREAPLNLVLLFGFTFCSGLTLT
                     PLLISVLALPAGGIIIAQAFALTTVAFAGLSVFAMNTKKDFTVMGKALFIVLIVIVAA
                     SLLNLFFQSGIVNLAISAVAAILFSFYILYDTQNIIRGNYETPIEGAVALYLDFVNLF
                     VSLLNILRSFNSK"
     gene            5698..6066
                     /gene="secG"
                     /locus_tag="RTF91_001126"
     CDS             5698..6066
                     /gene="secG"
                     /locus_tag="RTF91_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDZ4944008.1"
                     /translation="MITLLIILQFAIVVVICIAVLLQKSSSIGLGAYSGSNESLFGAK
                     GPAGFLAKFTFVMGILLIANTIGLGYLYNKASKDSLAEKIKVENNTTIPSAPIVPTAP
                     NTNSIAPSAPQLPNDVNSSK"
     gene            6077..6640
                     /gene="frr"
                     /locus_tag="RTF91_001127"
     CDS             6077..6640
                     /gene="frr"
                     /locus_tag="RTF91_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDZ4944009.1"
                     /translation="MIMLNEIFNKQKTQSEKSLEALKKDFTTLRTGKVNTHILDHITV
                     DYYGTQTPLNQVATVLASDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKL
                     FFPPMTREQREENVKQVKAMGEKAKVSIRNIRKDANDAVKKLEKDKTISEDEAKKAYD
                     EVQKLTDAYTAKIDESVKSKESELLKV"
     gene            6643..7251
                     /gene="pyrE"
                     /locus_tag="RTF91_001128"
     CDS             6643..7251
                     /gene="pyrE"
                     /locus_tag="RTF91_001128"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDZ4944010.1"
                     /translation="MNLEQIYKDCGAYLEGHFLLSSGKHSQFYLQSAKVLEDPKLAAK
                     LCDELAKIIASYKVEFDSICSPALGGIVAGYELSRACNKRFIFTERVNKEMTLRRGFE
                     VKKGEKFIVCEDIITTGGSALESAKIIESSGGVVIGFAALANRGFCAVENLKSPRKNN
                     AKLPDNLPLFTLGNFKFEIYDETNCPLCQKGSKAIKPGSRGN"
     gene            7252..7662
                     /locus_tag="RTF91_001129"
     CDS             7252..7662
                     /locus_tag="RTF91_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDZ4944011.1"
                     /translation="MKTKAKIGSRWLRFRALLIDVFLIYVPILYLFYFLLGSKEAFLN
                     NHFITTLCTFLFGFIQAIFLAKKAQSPGLKAYDLYLIDIKTGKKLSFLRILLRYVIFI
                     ISFGLLFGLLVSFLRKDRLNLHDILTQSCIVTKA"
     gene            7676..8698
                     /locus_tag="RTF91_001130"
     CDS             7676..8698
                     /locus_tag="RTF91_001130"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDZ4944012.1"
                     /translation="MQRKRIYNPSSNETLGDRKVFDGNPHGILNFTKAKYTWALKLWD
                     LMEANTWFPKEVDTTKDALDYRCNLTAGEKRMYDLVWSQLISMDSFQSNNLADNINPY
                     ITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSI
                     YEELAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDE
                     ITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFTD
                     DIIEEYIHYLVDQRLSAINLDKLYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS
                     ISFDDF"
     gene            8685..10058
                     /locus_tag="RTF91_001131"
     CDS             8685..10058
                     /locus_tag="RTF91_001131"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDZ4944013.1"
                     /translation="MMISKTSLALLCDFYEFTMSQGYFKNNKKDQICYFDIFFRKIPD
                     AGSFAIFAGLEDILDFIENLSFDAEDIKFLRKQGIFDAEFLDFLSDFKFKGEIYAIRE
                     GEVIFPNEPLLCIKATTIEAQLLETFLLLSLNHQSLIATKANRIVRAAKESKILEFGS
                     RRAQGSEAALKGARAAFIGGCIGSACTLAGKIYNIPINGTMAHSWVQMFENELEAFKA
                     YVKIYPKSPVFLIDTYDCLNSGLKNAIKVFKEFNIQEGGVRIDSGNLLELSLKIRQEL
                     DQVGLQNCKIIASNGLDEWSIKKLKKQNAPIDIFGVGERLITASSDPIFSCVYKLAAL
                     EDEGLKPKIKISENNEKSTLPHFKKLFRVYDKNTKKILFDELYVFDEKPNQDENLERK
                     ELLELVYKEKRLLKKPSLNAIQNYAKKQISKLDESFLDLDRFVKFEVKLSSKLQNITE
                     DLLKTRF"
     gene            complement(10027..10575)
                     /locus_tag="RTF91_001132"
     CDS             complement(10027..10575)
                     /locus_tag="RTF91_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HDZ4944014.1"
                     /translation="MLIKFKNYSPKLGQNVFVAKGAKIIGEIEIGDESSIWFNCVLRA
                     DVNFIRIGKRTNIQDLSTVHVWHREFDEKGNLKDAGFPTIIGDDVTIGHNCVIHACVI
                     KNRVLIGMNAVIMDDALIEEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRELNDEEV
                     MFLKQSALNYVDFKNEFLKDLQ"
     gene            10664..11293
                     /locus_tag="RTF91_001133"
     CDS             10664..11293
                     /locus_tag="RTF91_001133"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HDZ4944015.1"
                     /translation="MNAFEQKRCQNMAEEIAQKVFINEDLFNAFCQIPREIFSPLKAH
                     AYRLDALPLANSQWISSPLTVAKMTMALNFKDADNILEIGCGSGYQAAILSKVIRRVF
                     TIERIENLAKKAAQTFRELELFNINVKFDDGQNGWKNYAPYDRILFSAYATQIPEILL
                     DQLSDGGVLVAPILHNGKQFITRLRKNGTNLQKEVLEECLFVPIVDGKE"
     gene            complement(11311..12492)
                     /locus_tag="RTF91_001134"
     CDS             complement(11311..12492)
                     /locus_tag="RTF91_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDZ4944016.1"
                     /translation="MDYKEQSHIIPTYKRFDIVLEKGQGVYLFDDKAKKYLDFSSGIG
                     VCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIATAAKNLAKVSGLERVFFTNSGTE
                     SIEGAMKTARKYAFNKGIKGGHFITFKNSFHGRTLGALSLTANEKYQKPFKPLILGVK
                     FAKYNDLLSVEKLVNEKTCAIILESVQGEGGINPSNKDFYKALRKLCNEKDILLIADE
                     IQCGMGRSGKFFAYEHAQVLPDIMTSAKALGCGLSVGAFIVSQKVAQNSLEVGDHGST
                     YGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLEALIKEFDFCKKRKGLGFMQ
                     GLSLDKSVKVAEVIKKCQENALLLISCGENDLRFLPPLIMQKEHIDEMSEKLRKALKS
                     F"
     gene            complement(12503..13348)
                     /gene="argB"
                     /locus_tag="RTF91_001135"
     CDS             complement(12503..13348)
                     /gene="argB"
                     /locus_tag="RTF91_001135"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDZ4944017.1"
                     /translation="MIMQKYLEKANVLIEALPYIRKFNSKIILIKYGGSAMENEELKH
                     CVMQDIALLKLVGLKPIIVHGGGKDISAMCEKLGVKSEFKNGLRISDKATTEVASMVL
                     NHINKNLVHSLQNLGVKAIGLCGKDGALLECVKKDENLAFVGAIQKVNSKVLEELLEK
                     DFLPIIAPIGMDEDFNTYNINADDAACAIAKALRAEKLAFLTDTAGLYEDFNDKNSLI
                     SKISLEQAKILAPKIEGGMHVKLKSCIDSCENGVKKVHILDGRVKHSLLLEFFTDEGI
                     GTLVG"
     gene            complement(13352..13798)
                     /locus_tag="RTF91_001136"
     CDS             complement(13352..13798)
                     /locus_tag="RTF91_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDZ4944018.1"
                     /translation="MLIRAMKKSDYEAVYKLWCEIKGFGIRSIDDSKENIENFLDRNP
                     NLSVVAVVDEEIIGSILCGHDGRTGGFYHVCVHKDHRKKGIAHEMTKFCLESLKAQKI
                     NKIALIAFKNNDLGNEFWKHYGFSLREDANYYDLSLNEHNQTSFNT"
     gene            complement(13808..14839)
                     /locus_tag="RTF91_001137"
     CDS             complement(13808..14839)
                     /locus_tag="RTF91_001137"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDZ4944019.1"
                     /translation="MKIKVGIIGASGYAGNELVRILLNHPKVEISYLGSSSSVGQNYQ
                     NLYPNTPLNLCFENKNLDELELLDLLFLATPHEFSAKLLNENLLKKMKIIDLSADFRL
                     KNPKDYELWYKFTHPNQELLQSAVYGLCELYKEKIKKANLVANPGCYTTCSILSLYPL
                     FKEKIIDFDSVIIDAKSGVSGAGRSVKVENLFCEINENIKAYGLTSHRHTPEIEEHLS
                     NAAGEKIALQFTPHLVPMQRGILISAYVNLKEDLQEQDIRDIYTKYYQNNKFIRLLPP
                     QSFPQTRWVKSSNFADINFSVDQRTKRVIVLGAIDNLIKGAAGQAVQNMNLMFDFDED
                     EGLKFFANL"
BASE COUNT         5255 a         2410 c         2243 g         5134 t
ORIGIN      
        1 atatcctaat taaaattaag gataaattaa ggattttaaa gtgaaagcat atttagataa
       61 taatgcaaca acaatgcttg atcccaatgc ttatgagttg atgctacctt ttttaaaaga
      121 tatgtatgga aatccaaata gccttcatca atacggaagt gcaacacatc ctgctttaag
      181 agaagcttta gataaacttt acgtaggact tggagcaaat gacttagatg atatagttgt
      241 aacctcttgt gcaacagaaa gtatcaactg ggtgcttaag agtgtgtatt ttgatcatat
      301 tttggataaa gaacgcaatg aggtgattat ttctagcgtg gaacatcctg ctgttactgg
      361 cgctgcttat tttttaaaaa gtcttggagt aaaagttata gaacttcctg taaatgaaga
      421 aggagtttct actgtagaag atttacgtaa agtgattagt gataaaacag cacttgtaag
      481 tgttatgtgg gcaaataatg aaacaggtat gatttttgat attaaagcta tggtagaact
      541 tgctcatgaa tttggtgctc ttttccatac agatgctact caagcggtag gtaaaataaa
      601 agttaacttg actcaggtag gagttgattt tgcttcgttt tcagcccata aatttcatgg
      661 accaaagggt gtgggtggac ttttcataaa aaaaggactc aagcttaccc cgcttttaca
      721 tggtggagaa catatgggtg gtcgtagaag tggaactttg aatgtgcctt atatagtggc
      781 tatgggtgaa gctttacgta ttgcaaatac tatgcttgac tttgaagact ctcatatacg
      841 tcgtttaaga gataaattag aaaatcaaat tttagctttg cctgatacaa cagtggttgg
      901 aaaaagagaa catcgtgtac caaatacaat tttagcaagt attaaaggcg ttgaaggtga
      961 ggcaatgctt tgggatttaa ataaaaatgg tatagctgca agtacaggat cagcctgtgc
     1021 aagcgaagct ttagaaagca atcctatcat ggaagctatt ggtgcggaac atgatttagc
     1081 acatacagct ttaaggcttt ctttatcacg ttttaatacc gaagaagaaa ttgattatgc
     1141 agcaaagcaa attaaaaatg caacagaaag attaagagca atttcttgca cttatgctta
     1201 taatccaaat aattataaat aaggataaaa aatgggaaaa aatagtttaa ttggcggatc
     1261 aatttgggat gagtattcac aaaaagttca agatagaatg aataaccctc aacatatggg
     1321 agaatttaat gaagaagatg ctaaagcacg caatgcaaaa ttaatcgtag ctgattttgg
     1381 cgcagaaagt tgtggtgatg cggtaagact tttttggctt gtagatgaaa aaaccgataa
     1441 aattatcgat gcgaaattta aaagttttgg ttgtggtaca gctatagcaa gtagtgatac
     1501 aatggtggat ctttgtatag gaaaaaccgt agatgaagca gtaaaaatca caaatttaga
     1561 tgtggaattt gctatgcgtg ataatccaga aaccccagca gttccacctc aaaaaatgca
     1621 ctgttcggtt atggcttatg atgtaattaa acaagcagca gcacattata aaggtataag
     1681 tcctgaagat tttgaagatc aaattatagt ttgtgagtgt gctagagtaa gtcttggaac
     1741 tattaaagaa gtgattaaac ttaatgattt acattctgtg gaagaaatca ctcaatatac
     1801 taaagcaggt gctttttgta aatcctgtat caaaccaggt ggacatgaaa aaagagatta
     1861 ttatcttgta gatattttag ctgaaactag agctgaaata gatagagaaa aacttaaaag
     1921 cgtgatgaaa agtgatgtag cttttgatga aatgacttta gtaggacaat taaaagcagt
     1981 tgaaagcgtt ttagatgctg aaattcgtcc tatgcttcat aatgatggtg gagatctaga
     2041 agtgattgat atacaaaagg ctgaaagcgc agctattgat gtatatattc gttatcttgg
     2101 tgcttgtagc ggttgttcta gtggaagtgg tgcaacactt tatgctattg aaactatttt
     2161 acaagaagaa ttaagtccaa atatacgcgt tatgccagtt taaaaaaata gcaagatttt
     2221 atcttgctat tttacagctt ttgtttgcaa atcaaggggt ggcaaatttt ctatataaat
     2281 actacggctt gggaaagcga aggttaaacc atttttttca attatgcgca taaattcaag
     2341 cattaaactt tgtctagctt ctctaaaatc ttttccacct atttctttgg tataaaaata
     2401 aagctctata ttaatactac tatctgcaaa ttcacttaaa gctacataac aagcattttt
     2461 ataaccttct aaatcattaa tagatacaag attttgacga tatttggttg tatgatcacc
     2521 gtattttaat gcactatcct catcgtgagc caccaaatca cttgtatgta aaaattctct
     2581 tagatctttt acacattgtt ctagtttttc aggagtagca tcataaccaa cacccaaata
     2641 cattctaaca tggcgaccca tgcgtctttt actccaattt ttaatattgg ctcccatgat
     2701 ggttgaattt ggtaaaaata caagacaatt atcaaaagtt ctaatggtag tttttctaag
     2761 ccctgtttca accacagttc cttctatgcc tgaaacctct acccaatctc cttgattaaa
     2821 gctattatca aaaagcaaaa gtatggaagc aaagaaattt gcaataatat cttttgctgc
     2881 taaagcaaca gccaaaccac caatccccaa tgatgcaata atagctgaaa tattaaaacc
     2941 aagctgagca agaatataca ataaagctat gacaataata acaaaatata aaattttaat
     3001 aattaaatta acaacttctt tttttccact tttttgagca agcttagaaa ctagtaccac
     3061 accataacca tcaagcattc ttagaataag ccatgcaatc aaaactgcat aaactatatg
     3121 aaaaaaatta cttaaattta tactcaaagg tgcaggataa atcgctatag taagacaaag
     3181 agaagtagca tagataatta gcaaaaaacc tacaggtttt ttaatattct caataaaaat
     3241 tactttaata tcatctacat catttttatt tctatagaaa agttgaacaa gaaaaaagta
     3301 tactatatta gcaaaaaaac gtcttaaaga tataaaaaat accaaaacca aagcagaaat
     3361 tactattttt ccaacattaa taaaacttac accaaccgcc tcattgatac gatctatcca
     3421 aacttgaagc tcaagtaatg aaaaaatata attactttca agtaagtctg catttgagcg
     3481 caaatattta agaatttcag aataagaatc tacagcatta ctaatatatc tttcttttag
     3541 ggtaattttc tctaattcct ctggatttgt aatcttgctt ttgaaactat ctaaacttac
     3601 attagaagag ttttgtaaat tttccattgc cttgtcaata gtagcaatca aatctttact
     3661 gcttgctgta tttttaaaaa gtttttccat ttcaaacaaa gaagaataaa aactttctac
     3721 aatattaaaa taaatcagat taagagtagc atctgtataa acataaggtt tattaatatt
     3781 ctttttttga atatctagaa atttttcctt tgcttttaaa aatctagcta cagcttcttc
     3841 atcaatcttt tgtcctacta tcatatcagg tatttttgcc aaaatagtct ttttgtcttt
     3901 tttaaattca cttaaaatac cattaaaagt gcttgaattt tcatcattat ttttcttaaa
     3961 ttctctaatt tgattgttaa gatcaacata tttttcaact aaagcataaa ttcctttatc
     4021 ctctttgctg atacttgcat caataaattt aaattcttgt gctccaaggt ataaaataaa
     4081 aaaacataaa ccaaaaataa tttttttcat tgaactttcc tatcttgaat taaggtaaaa
     4141 atttttgctt taaaatcata ctcataaatt tcacctgttt ctataatata ataccaagca
     4201 tgtacttcaa gttttccttc atctaaagct tcttgtacac ctggataagt aagtatattt
     4261 tgcaaagaat ttaccaaatt taatttttct gttagccatg aacgcatagc taaatcatct
     4321 cttgcgaaaa tcatcacatc tttttttatc ggatctaaca tggtaagcca tttttttaca
     4381 ttaggaattt tatttaattc ttcatcagaa caataaagag cattacaacc cccacaattg
     4441 ctatgaccac aaacgacgat atttttaata tgcaatgaat ttaaagcata ctctattgct
     4501 gaagttgttg ccaaataatc ttctccaaca cgataaggtg gaattatgtt tgcaatattt
     4561 cgtattacaa aaagctcacc tgggccagta ttggtgatca aatttggaat taccctagaa
     4621 tcagaacaac ctataaagag agtatgggga ttttgcctat tttttagact ttcaaaaagc
     4681 tcttcatgct ccttaaagtc ttcttgcatg aatttaatcg caccactaat aagattttcc
     4741 ataaaccaac ctgaaactaa aatcttaaaa ttataacaaa atttcagcaa agatttcatt
     4801 taagcataag atattataca attaactttt tatttaatct aatatgttag atttcgctca
     4861 agattttaaa aaatctaaca attttacaag gagaatatat gagtctttat gatagagact
     4921 actcaagatc aaaagaattt gaaaatacac gctcaagcga attaagtatt tttattaaac
     4981 aaacttatca actttttgct gcttcattat tagccgcaac agtaggtgcg tatgtaggaa
     5041 tttttgcttt agcatcattt tttatacaat cacaagtaac tttttggatt ctttttgccg
     5101 ttgaaatcgg acttttattt gctttacaat ggaaaaaaag agaagctcca ctaaatcttg
     5161 ttttactttt tggttttact ttctgttcag gtttaacact tacaccttta cttatttcgg
     5221 ttttagcttt accagctgga ggaattatta tcgctcaagc ttttgcttta acaaccgttg
     5281 cttttgcagg acttagtgta tttgctatga atactaaaaa agattttact gttatgggta
     5341 aagctttatt tatagtattg attgttattg tagcagcatc tttgcttaac cttttctttc
     5401 aaagtggtat agttaattta gctatttcag cagtagctgc aatattattt tcattttata
     5461 ttctttatga tacgcaaaat attatccgtg gcaactatga aactccaatc gaaggtgcgg
     5521 tagcacttta tcttgatttc gttaatcttt tcgtatcttt acttaatatt ttaagaagct
     5581 tcaatagcaa ataagttttt gtgggatgtt tctcacaaaa actttccaaa tttcaaaact
     5641 tttcaagttt tatttagtta aaataaccgt ttaaaaatta acttttagga attttcaatg
     5701 atcactcttt taatcatttt acaatttgct atcgttgtag ttatttgtat agcggtttta
     5761 ctgcaaaaaa gttcaagtat aggtcttgga gcttatagcg gaagtaatga aagtttattt
     5821 ggtgctaaag gaccagctgg atttttggca aaatttacct ttgttatggg aattttactt
     5881 attgcaaata ctattggtct tggttatttg tacaacaaag ctagcaaaga ctctttagcg
     5941 gagaaaatta aagtagaaaa caacactact attccaagtg ctcctattgt acctactgct
     6001 ccaaacacaa attccattgc tccaagtgca ccacaacttc caaacgacgt taattcaagt
     6061 aaataattaa aaggaaatga taatgctaaa tgaaattttt aataaacaaa aaactcaaag
     6121 tgaaaaatct ttagaagctt taaaaaaaga cttcacaacc ttaagaactg gaaaagttaa
     6181 tactcatatt ttagatcata ttacagtaga ttattatgga actcaaactc ctttaaatca
     6241 agttgcaact gttttagcaa gcgatgcttc aactattagc attacccctt gggaaaagcc
     6301 tttattaaaa accatagaaa gtgcaattgc agctgcaaat attggtgtaa atccgaacaa
     6361 tgatggtgaa agcgtaaaat tattttttcc tccaatgact agagaacaaa gggaagaaaa
     6421 tgtaaaacaa gttaaagcta tgggtgaaaa ggcaaaagtt tctataagaa atatacgcaa
     6481 agatgctaat gacgcggtta aaaaactaga aaaagataaa acgataagtg aagatgaagc
     6541 aaaaaaagct tatgacgaag tacaaaaact taccgatgcc tacacagcaa aaattgatga
     6601 aagtgtaaaa agcaaagaaa gtgaactttt aaaggtttaa tgatgaattt agaacaaatt
     6661 tataaagatt gtggtgctta tttagaagga cattttttac taagttcagg caaacattcg
     6721 cagttctatc ttcaaagtgc aaaagtttta gaagatccaa aattagcagc aaaactttgt
     6781 gatgagcttg caaagattat tgcaagttat aaagtagaat ttgatagcat ttgttctcct
     6841 gctttgggtg gaattgtagc aggttatgag ctttcaagag cttgcaataa gcgttttatc
     6901 tttactgaaa gagtaaataa agaaatgact ttaagacgcg gttttgaagt aaaaaaaggt
     6961 gaaaaattta tagtttgtga agatatcatt accacgggtg gtagcgcttt agaaagtgca
     7021 aaaatcatcg aaagttcagg tggtgttgtt ataggttttg cagcgttagc aaatcgtggt
     7081 ttttgtgcgg tagaaaattt aaaatctcct agaaaaaata atgcaaaatt acctgacaat
     7141 ttacctctat ttactttagg aaattttaaa tttgaaattt atgatgagac aaattgtcca
     7201 ctttgtcaaa aaggaagcaa agctataaaa ccaggaagtc gtggaaatta aatgaaaact
     7261 aaagcaaaaa ttggctctag atggctaaga tttagagctt tgcttataga tgtttttctt
     7321 atttatgttc ctattttgta tttattttat tttctattag gctctaaaga agctttttta
     7381 aacaaccatt ttattacaac tttatgtact tttttatttg gctttattca agctattttt
     7441 ttagcaaaaa aggcacaaag tccgggtctt aaagcatatg atttgtatct tattgatata
     7501 aaaacgggaa agaaattaag ttttcttaga attttactaa gatatgtgat atttattata
     7561 agttttggct tactctttgg tttattggtt agttttttaa gaaaagatcg tttaaattta
     7621 cacgatattt taactcaaag ttgtatagtt accaaagcat aaagaaaggt taaaaatgca
     7681 aagaaaaaga atttacaatc caagctcaaa cgaaactcta ggagatcgta aagtttttga
     7741 tggcaatcca catggaattt taaattttac caaagcaaag tatacttggg ctttaaaact
     7801 ttgggactta atggaggcaa atacttggtt tccaaaagaa gttgatacaa ctaaagatgc
     7861 gcttgattat cgctgtaatt taaccgcggg cgaaaaaaga atgtatgatt tggtttggag
     7921 tcagcttatt tctatggata gttttcaaag caataattta gcagataata tcaaccctta
     7981 tattaccgct cctgaaatca atgccgtttt agcacgtcaa gcttacgaag aagcaaatca
     8041 ttcaaaatct tatgctgtaa tggtagaagc aatttgtgat aatacagatt tgatttacga
     8101 aatggaaaaa catgacgaaa ctttgcgtga aaaaaatgat tttatttcaa gtatttatga
     8161 agaattagca ggtgatgtag acgataataa acttctttta gctatggtag caaatcaaat
     8221 tttagaaggg gtgtattttt acagtggttt tactgctatt tacgcccttg cacgtgcagg
     8281 aaaaatgcta ggttcagcac aaatgattcg ttttatccaa agagatgaaa tcacacatct
     8341 tttattattt caaaatatga tcaattcagt acgcaaagaa agacctgatt tgtttcatga
     8401 tgaaaatatc aataaaattt atgatatgtt taaaaaggct ggagatcttg aaattaaatg
     8461 gggcaaatat atcactcaaa atcaaatcat gggctttact gatgatatca tagaagaata
     8521 tattcattat cttgtagatc aaagattaag tgcgatcaat ttagataaat tatacaatgc
     8581 aaaacatcct attaaatggg tagatgattt ttcaaaattt aatgatcaaa aaagcaattt
     8641 ctttgaaagt aaagtaacaa attattctaa gggtagcata agctttgatg atttctaaaa
     8701 cttctttagc cttgctctgt gatttttatg aatttacaat gtctcaaggc tatttcaaaa
     8761 acaacaaaaa agatcaaatt tgttattttg atatattttt tcgaaaaatc cccgatgcgg
     8821 gatctttcgc tatttttgca ggtcttgaag acattttaga ctttattgaa aatttgagtt
     8881 ttgatgcaga agatataaaa tttttaagaa aacaaggtat ttttgatgca gaatttttag
     8941 attttttaag tgactttaaa tttaaaggtg aaatttatgc tatacgtgaa ggggaagtga
     9001 ttttcccaaa cgaaccttta ctttgcatta aagctaccac tatagaagca caacttttag
     9061 aaactttttt acttttaagt ttaaatcatc aaagccttat cgccactaaa gcaaatcgta
     9121 tcgtgcgtgc agctaaagaa agtaaaattt tagaatttgg ctcacgcaga gcacaaggaa
     9181 gtgaagcggc tttaaaagga gcaagagcag cttttatagg aggttgcata ggaagtgctt
     9241 gtactttagc aggaaaaatt tataatattc ctatcaatgg aactatggca cattcttggg
     9301 tgcaaatgtt tgaaaatgaa cttgaagctt ttaaagctta tgtaaaaatt tatccaaaaa
     9361 gtcctgtttt tttaatcgat acttatgatt gtttaaacag tgggcttaaa aatgcaatta
     9421 aagtttttaa agaatttaat atccaagaag gtggtgtaag aatagattct ggtaatttgc
     9481 ttgaactaag tttgaaaatc agacaagaac ttgatcaagt agggcttcaa aactgcaaaa
     9541 ttatagcttc taatggctta gatgagtgga gtattaagaa attaaaaaaa caaaatgcac
     9601 caattgatat ttttggcgta ggtgaaagac tgatcactgc ttcaagtgat cctattttta
     9661 gttgtgttta taaacttgca gccttagaag atgaaggtct aaaacctaaa atcaaaatca
     9721 gtgaaaataa tgaaaaatca accttacctc attttaaaaa gctttttaga gtttatgaca
     9781 aaaacacaaa aaaaatcctt tttgatgaac tttatgtttt tgatgaaaag ccaaatcaag
     9841 atgaaaattt agaacgtaaa gaacttttag aattggttta taaagaaaaa agacttctta
     9901 aaaaaccatc tttaaatgct attcaaaatt atgcaaaaaa gcaaatttca aaacttgacg
     9961 agagtttttt agatcttgat cgttttgtga aatttgaggt aaaactctca tccaagcttc
    10021 aaaatatcac tgaagatctt ttaaaaactc gtttttaaaa tccacataat ttaaagccga
    10081 ttgttttaaa aacatcacct cttcatcgtt taattcacgc acaaattttg caggatttcc
    10141 aagtattaaa gatcgtggcg gaaatttttt accctttgta acaacacttc cagcacccac
    10201 tatactatct tcttctatta aagcatcgtc cataataaca gcattcattc cgattaaaac
    10261 acgatttttt atcacgcaag catgaataac acaattatgt cctatagtta catcatcacc
    10321 tattatcgta ggaaaaccgg catcttttaa atttcctttt tcatcaaatt ccctatgcca
    10381 aacatgcact gtgctaagat cttgaatatt ggttctttta ccaattctga taaaattaac
    10441 atcagctctt aaaacacaat taaaccaaat actactttca tctcctattt caatttctcc
    10501 tatgatttta gcaccctttg caacaaaaac attttgacct agttttggac tgtaattttt
    10561 aaattttata agcatttttt tcctttttat ttaagtatag ctaagtttaa ctctatttca
    10621 acttttttag ttacaatttt tatttaaatt tataggagaa ataatgaacg catttgagca
    10681 aaaaagatgt caaaatatgg ctgaagaaat tgcacaaaaa gtttttatca atgaagatct
    10741 ttttaatgct ttttgtcaaa ttccacgtga aattttttct cctttaaaag cccatgctta
    10801 tcgccttgat gccttacctt tagcaaattc tcaatggatc agctcgcctt taactgtagc
    10861 taagatgact atggctttaa atttcaaaga tgccgataat attttagaga taggttgtgg
    10921 aagtggttat caagctgcga ttttaagcaa agtcataaga cgggttttta ctatagaacg
    10981 catagaaaat ttggctaaaa aagccgctca aacttttaga gaattagaac tttttaatat
    11041 caatgtaaaa tttgatgatg gacaaaatgg ttggaaaaat tatgcccctt atgatagaat
    11101 tttattctct gcttatgcga cacaaattcc tgaaatttta cttgatcaat taagcgatgg
    11161 cggggttttg gtcgctccta ttttacacaa tggcaaacaa ttcattacac gccttagaaa
    11221 aaatggcaca aatttacaaa aagaagtttt agaagaatgt ttatttgtgc ctatagtaga
    11281 tggaaaagaa taaacttttt acaaatttta ttaaaaactc tttaaagcct ttcttagttt
    11341 ttcactcatc tcatcaatat gttctttttg cataatcaaa ggcggtaaaa atcttaaatc
    11401 attctcccca caacttataa gtaaaagtgc attttcttga cattttttaa tcacctcagc
    11461 cacttttaca cttttatcaa gactaagtcc ttgcataaat cctaagcctt tacgtttttt
    11521 acaaaaatca aattctttta tcaatgcttc taaactttgt tctaaataag gcgtgagttt
    11581 atttacattt tctaaaattt tttcttcttt aaagatttca aaaactgcat ttactcctgc
    11641 acaaaccaaa ggatttcccc cataagtgct accatgatca cccacttcta aagaattttg
    11701 tgccaccttt tgacttacta taaaagcacc tacactaagc ccacaaccta aagccttagc
    11761 tgaagtcatg atatcgggca aaacttgtgc gtgttcataa gcaaaaaatt tcccacttct
    11821 tcccatgcca cattgaattt catcagcaat taataatata tctttttcat tacaaagctt
    11881 tcttaaagct ttgtaaaaat ctttatttga gggatttatc ccaccttctc cttgtacgct
    11941 ttctaagata atagcacaag ttttttcatt cactagtttt tcgacgctta aaagatcatt
    12001 gtattttgca aatttaaccc ctaaaattaa aggtttgaaa ggcttttggt atttttcatt
    12061 ggcagtaagc gataaagccc ctaaagtgcg tccatgaaaa gaattcttaa aagtaatgaa
    12121 atgtccaccc ttgatacctt tattaaaggc gtattttcta gctgttttca tcgctccttc
    12181 tatactctct gtacctgaat ttgtaaaaaa aactctctct aaaccactaa ctttggctag
    12241 atttttagct gcagtggcta tgttttcatt gtagtataaa ttgctagtgt gtaaaagctt
    12301 atccacttga gctttgattt tagcattaaa tttagcatga ttatatccta aggcacaaac
    12361 acctatacca cttgaaaaat caagatattt tttagcctta tcatcaaaaa gataaacccc
    12421 ttgccctttt tctaaaacta tatcaaaacg cttataagta gggataatat gactttgttc
    12481 tttataatcc atttttcatc ctttaaccca ctaaagtgcc tataccttca tcagtaaaaa
    12541 actcaagcaa caaagaatgc tttacacgtc catctaaaat atgcaccttt tttactccat
    12601 tttcacaaga atcaatgcaa gattttaatt ttacatgcat accgccttct attttagggg
    12661 ctaaaatttt agcttgttca aggctaattt ttgaaatcaa agaattttta tcattaaaat
    12721 cctcataaag ccctgcagta tcggttaaaa aagcaagttt ttcagctctt aaagccttag
    12781 cgatcgcaca agctgcgtca tcagcattga tattataagt attaaaatcc tcatccattc
    12841 caataggagc aatgataggt aaaaaatctt tttccaaaag ctcttctaaa accttagaat
    12901 ttaccttttg tatcgcgcca acaaaagcta aattttcatc ttttttcaca cattctaaaa
    12961 gtgctccatc tttaccacaa agccctatgg ctttaactcc taaattttgc aaactatgga
    13021 ctaaattttt attgatatga tttaaaacca tacttgctac ctcagtagtg gctttatcac
    13081 taattctaag accgttttta aactcactct tgacgcctaa tttttcacac atagcagaaa
    13141 tatcttttcc cccgccatgt acgataatag gctttaaacc cacaagtttt aaaagagcta
    13201 tatcttgcat tacgcaatgc tttagctctt cattttccat agctgatccg ccgtatttta
    13261 taagtataat cttagaatta aattttcgta tataaggcaa agcttcgatt aagacattgg
    13321 ctttttctaa atatttttgc atgataattc cttaagtatt aaaactagtt tgattatgct
    13381 cgtttaaaga aagatcataa taatttgcat cttctcttaa agaaaaccca taatgcttcc
    13441 aaaactcatt gcctaaatca ttatttttaa aggcaattaa ggcaatttta ttgatctttt
    13501 gagcttttaa ggattcaaga caaaattttg tcatctcatg tgctataccc ttttttctat
    13561 gatctttatg cacacacaca tgataaaatc cccctgtgcg tccatcatgc ccacaaagta
    13621 tgcttcctat aatttcttca tcaaccactg ctacaacgct aagatttgga tttctatcta
    13681 aaaaattttc tatattttct ttactatcat caatgcttct tatcccaaag ccttttatct
    13741 cgcaccaaag cttataaaca gcttcataat cgcttttttt catagctcgt attaacattt
    13801 ttatccttta caaatttgca aagaatttaa gtccttcatc ttcatcaaaa tcaaacatta
    13861 aattcatatt ttgaacagct tgtcctgctg cacctttgat taaattatca atagcaccaa
    13921 gcacaataac acgctttgta cgttgatcta cactaaaatt tatatccgca aaattgcttg
    13981 atttaaccca ccgagtctgc ggaaacgact gcggcggtaa aagccttatg aatttattgt
    14041 tttgatagta ttttgtataa atatcgcgta tatcttgttc ttgcaaatcc tcttttaaat
    14101 ttacataagc actgattaaa attcctcttt gcataggcac aagatgaggg gtaaattgta
    14161 gagcaatttt ttctcctgct gcattgctta aatgctcttc tatttctgga gtatgacgat
    14221 gtgaagttaa accataagct ttgatatttt catttatttc acaaaaaaga ttttccacct
    14281 ttacacttct tcctgccccg ctaaccccgc tttttgcatc aataataact gaatcaaaat
    14341 caatgatttt ttctttaaaa agtggataaa gacttaaaat cgaacaagtg gtataacaac
    14401 ctggatttgc caccaaattt gcttttttta tcttctcttt ataaagctca caaagtccat
    14461 aaactgcact ttgcaaaagc tcttgattag gatgagtgaa tttataccaa agctcataat
    14521 ccttaggatt tttaagacga aaatccgcac ttaaatcaat gattttcatc ttttttaata
    14581 aattctcatt taaaagctta gcactaaatt catgcggagt agctaaaaat aaaagatcaa
    14641 gtagttcaag ttcatctaaa tttttgtttt caaaacacaa atttaaagga gtgttaggat
    14701 aaagattttg ataattttgc cccacgctag aacttgaacc taaataagaa atttcaactt
    14761 tgggatgatt aagcaaaatg cgtacaagtt cattacccgc ataaccactt gctcctataa
    14821 tcccaacttt tattttcatc ttcatccttt aatgtaaaag caaatactat aacaaaaaag
    14881 cttaaaaaaa tacaatttta aattattttt tatttaaaat atatcttaaa ttagtattta
    14941 caatccaata tacacattta atcactaaaa atatcttttc taattcaaaa ctaaagtgta
    15001 tttaacatta atctataatt acttcttaaa aatatttttt ca
//
LOCUS       DAPWAA010000039        14711 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.039, whole genome shotgun sequence.
ACCESSION   DAPWAA010000039 DAPWAA010000000
VERSION     DAPWAA010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14711
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.039"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..498)
                     /locus_tag="RTF91_001138"
     CDS             complement(<1..498)
                     /locus_tag="RTF91_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HDZ4944020.1"
                     /translation="MGRNGDIFDFHFDTEKFKFYLKNRDKKVTYQDLMEILYKNGIES
                     SEATIKKWLMSKEDNKTKPKPQYIKILCNALDIPFNEVILQDVFRNDNQINFRYFPDI
                     YASAGLGTSSQSEEVKIVSVDENFLKEILDIPIKKSYDIIKINGDSMEPILSNGDFII
                     VDRSKN"
     gene            610..828
                     /locus_tag="RTF91_001139"
     CDS             610..828
                     /locus_tag="RTF91_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944021.1"
                     /translation="MKKIDFFDFTKILSNHYTVISVKKIRTNKSRPSFKKQIEFKKLY
                     GIPHEFWVDVRSNLINIPKRGRKRKDRE"
     gene            1066..1443
                     /locus_tag="RTF91_001140"
     CDS             1066..1443
                     /locus_tag="RTF91_001140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944022.1"
                     /translation="MKLAFLIYITSILDDISGLFINIAVITLIASIFLLVLFFYFEIE
                     EDKEIVKGIKTGMKIFIPVCVVVVFIAALMPSKQTAYLMAGAYIGELVIKSEFTNKRL
                     EKVIEIIDLNLDKQIKELQKVNK"
     gene            1440..2435
                     /locus_tag="RTF91_001141"
     CDS             1440..2435
                     /locus_tag="RTF91_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944023.1"
                     /translation="MIPNFIASFDVALGRKSLRERKGYLKLSNTIAYGGLSVDALALY
                     IQLAKLSEKTIVSEIYLREFIKVKNNQRISLNRLRIAKKELIELRLLEIKKVRNGSLN
                     FYEWILKDENYQIKKHFNKSLSLLKSSDEKLIKTLKNNTSSIDRKLTTENEKNQNSLY
                     IETRTHARDNKFINNINNKEFTKKENLENLKNNQEKKERVSNQNVSFVTSFIDFSKKE
                     LEKMAKKEFKVPNANELMRQIIAFNEKNGTNFGEELANDFIGYWDAREWKRNEKRMSS
                     VAGSLYTWLKYAKENETRKNQRFNRKKEANPSVVDSLMEYYGIKKENEVNLLGCF"
     gene            2445..3104
                     /locus_tag="RTF91_001142"
     CDS             2445..3104
                     /locus_tag="RTF91_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002902051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944024.1"
                     /translation="MQEKIQILMDLLEINKAQATDIVGRYLKSVKDIHAFLDFYFETL
                     ERENIVGTTYEKLRRVCKRAEIEFKKRFKDKEIFLEWLCDKYKNQACFRLHEGDFEYS
                     YFANCGNGKKIKINQKSIDILVCVNAFKQISYKNGEPLENNEFKEALLEFIFKNQDRI
                     GKNLNIPLLVKKIEKVLSLEEKREIEKRKESELFEKNKEKFLKNLNRILKINSINKAR
                     A"
     gene            3107..3496
                     /locus_tag="RTF91_001143"
     CDS             3107..3496
                     /locus_tag="RTF91_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944025.1"
                     /translation="MQMATREYDLYIELKDNPIPYKRTTQRAKFVSKDYLKYLEFKKH
                     LQMEFLRQNKVQCFKAFDEKKFYSIELKIGFKNKKHGDCDNILKGVLDALFKNDKNVI
                     KGEYELKSFEKSFLKVKISEFKGVENV"
     gene            3489..3860
                     /locus_tag="RTF91_001144"
     CDS             3489..3860
                     /locus_tag="RTF91_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944026.1"
                     /translation="MYKKKYTREEVERMINEYFSEEKILLRTKERDIKEPKSMTGLAV
                     YMKTTRQTLYEWGKDPNLSDLIEYAKTLCENEVVTHSLVNLYNPQMSTFILKNNHGYV
                     DKQEVVSDNVQKIEITRSEIK"
     gene            3857..5149
                     /locus_tag="RTF91_001145"
     CDS             3857..5149
                     /locus_tag="RTF91_001145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944027.1"
                     /translation="MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVI
                     ENLLLGQNVLWVDTIQANLQNYYELYFTPELKNLPKDFYSWSVQDKKLIINGAVLHMR
                     SAERSENIEGFGYDLVILNEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKG
                     KNLFYELCRKELSDKNWKHFQFSSYDNPFLKQEQIKELIEEVGGEGSEVVKQEIYGEF
                     IDSSSAELFALSEIENAMNKNSFSIEKMQGENIWGLDVARFGDDKSVLAKRKGFVVDE
                     IKKYSQLGTMELANKILAEYNKSEEKPKGIFIDTCGLGVGVYDVLQNYGLPVFEANSA
                     NSATSNEYLNKRAQMYFIFAKNLKHMELVKDDELKKDMRMIEYEYSDKGLLKIVSKEY
                     LKKNYGKSPDVSDAVALTFFEKLYSKNNTNEDWSYDGW"
     gene            5139..5411
                     /locus_tag="RTF91_001146"
     CDS             5139..5411
                     /locus_tag="RTF91_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002924542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944028.1"
                     /translation="MAGEFLMIYDAIDVNKIKKLSNLSDEAIKSSLANEFLELVSGFN
                     NISKKKFKREFAEFLFNKGVNEKDVLKITNLSKTTIWRIINENKKN"
     gene            5392..6927
                     /locus_tag="RTF91_001147"
     CDS             5392..6927
                     /locus_tag="RTF91_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944029.1"
                     /translation="MKTKRTNDERVSFLTQLISESKSGYENYKPHFKELQDAYLLENK
                     AMQRLRKRNKSSIYIPKINAKVKYLITSLNDVYFNSERMADIETYINSDDTIIELWQN
                     AIDFYSGKINMFKIFQPLFLDVLLVGTSIAKVTWHKGMPRIERVDIDSIFFDPNALNS
                     EDIGYIVNEIYLTYSQIIERQKLGFYKKIEIEKLFNEDDEYKKVKLYDIYERKNDDEW
                     VVSTLFENNLLRNEVILKDGQPFIWGSMLPQLKKIDNEDYVSAYGEPIMASAMPLQDE
                     INVTRNLLIDAVRSHITPKIIVAKSMGISREDIETLGKPISADDPKGVQILPPPNVNS
                     AGMNLQLLESELTEVTGVSPQNNGAQTAQNETATEISIKAQEGGRRSADYIRQYNETF
                     IEPLFDRFAMLVFKYGEDSFFNGFQREDVPSFRFKIQTGTGAMNKEVRRAGIQASMQV
                     FSQLYQMYMSIGDANSAYGIINASKELTKELLPILGVKNVNSLFAFENTQMQGEANAE
                     YRN"
     gene            6908..7111
                     /locus_tag="RTF91_001148"
     CDS             6908..7111
                     /locus_tag="RTF91_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944030.1"
                     /translation="MLSIEIKSDISKTKGGKKLIDFIKAKYSECFYIAKNNDEKELRL
                     KALDTMAFLDIIINKIKDEEDGK"
     gene            7101..7745
                     /locus_tag="RTF91_001149"
     CDS             7101..7745
                     /locus_tag="RTF91_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944031.1"
                     /translation="MENDALKDLMNVITDEGDTGEVANSEEHTQGIKEEPTQVAENEP
                     DYKAMFEAYKSENDSKLNALMSELEVLKNPKKEPSEQDLQREQYLKELGLDGLDEKLK
                     RLEEIDKKQKDKEEQDALIAKYAQVESELRKSYPDADLKAMAELATKLNGLGEGNIDS
                     WKTLLNLVGKSNNAKKAEDLSNMNNNVRTSDFNDKLKKGEVSEIDLGKELLSLV"
     gene            7757..8137
                     /locus_tag="RTF91_001150"
     CDS             7757..8137
                     /locus_tag="RTF91_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944032.1"
                     /translation="MDFITALKGGTGLGSTFADTLMKTSNFTPNLASSGSGFLNGLKN
                     SFSNFGDWLFKSSDANKVTNFDRLGNVLGGAGALYGAYNQQKMAQKNFDLQKDAYNFN
                     KFLANEELNRRKNMENKLQNVWSN"
     gene            8403..9617
                     /locus_tag="RTF91_001151"
     CDS             8403..9617
                     /locus_tag="RTF91_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944033.1"
                     /translation="MAFYNPQRVVFNPDTGVIQNAGKVGGVLYNIMSKSYDDKVKASQ
                     FQQEQDLKKQQMEFNQAMQNNQLLQNERNFDYQKERANTADLQWQMNYNQKSRQYAMQ
                     NALRQQEISANKAYKDLNYQKGLLELQKLQNEINTKQKEQDLLNGVLDNNQGFNSQNN
                     KNLLNDVKYKADAQFLDLASNQGKTYDTTHGFWNGAIERGFGGFGSQSTDLNDASDLF
                     LKRMQSDLLRGGKNAKWNLENIQANFPINGYTMEANNQRVAQALAGEWLAEAPNSFKM
                     ELAERLGSAKTSIERQSAIEDYQKNMEFYNNYAPKVKTFYWDEKYSKPSKNVVVINNS
                     ETKQNMQGDLAKNVLAVQNQDMPKLHNVNFNGINAQISEPDANGNVILVNQAGRKMQV
                     SIEELKKQGLIQ"
     gene            9614..13228
                     /locus_tag="RTF91_001152"
     CDS             9614..13228
                     /locus_tag="RTF91_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944034.1"
                     /translation="MNIREFLLEKPQENNIVAFLQDGVSQSENQNTNEYLVNLKNEVI
                     NDFYKNKDKYAKEYEKYNFKDQNLTNPMGYISEYKRDLYDYNKNPSMNADDLSNYILD
                     KQSKFNASKPIFADDNEVTRKSSQFMRDLGDELQKSGRGRLLQDNDGSYWVQDNNGNY
                     SKVQGSTMGNLYRGLRDNGTSVVLGTAGAIGGTMLGGGVGMVAGGALGASLGAGYDYY
                     GNTKDTNQDANLKEALMLMGENAGLSLIGDGVFAGVAKGARALKNTYNMAKTGAQAGK
                     DMIDGMAVNGSNLKENIGDKLRKISPSALNDLASQGSETSKAYARELIESGNGSYDDI
                     LQKSRAIPLEVNQGNALVDGVASKIRDFSNTAKNGFAKNTTGNIANSLNNISKNIGSK
                     EAALNQQDLINLSFMNDDLANMARGVLANDPKMANKVANSLHLQDEAMLKELNLNNIS
                     KADGLYALRDARVKRAYDEFGKGLEELDKLSPNGITIDKQALADIIDNSGVYVEATPA
                     KIKEFIKEAMSGGLDGKSAKEVYDRIDAIGKKLKDNSSYNYSRFLNSLKDEFLESIVR
                     GSNNKELSRKTLEKMRRDYADFKAYDKSKLGEKLKGSEKNISKDIDKILNETNPKKNY
                     EAITKGLNDSEIKVIDNQIITRALEKNKINIGDANNPKFVLNYKAVMDNLENFKPKSK
                     AGQEQMEVLKTISNLRSSFDTIIDGILNTKSKELGHGISTNLIERAKTMLVNNFTDYI
                     AFYFMRLWEVGKRAGTRIQMRRGFSNINNLKDFDRSAKEFIESIKDKTLKKEAQEARK
                     EFNSKVKDLIKGDNFFMDKPNPKYAKSDYTAKFNVEKWINNVSGILKNEWVVNLKAMA
                     KKHPEMFKNEADVFRVIKEIKDNPTHFFKNYDDGVALIAKPLKDDKVGNMAIKKDSGK
                     IIHINKTKGKDLERLNRRNKEMLTGTPTPATTKGSTTNVEGGLLQHSFKNSTQAKPKK
                     NLMNDIKENIKNKEVKKKNKKSIKQRLDEKIQDDKKASEDILKRYDDFLKENKDNKLG
                     FLDKMNLNAIEYNLTRQMITNAKENTSKGIKKDIPSALRAKIEQELNINPLKEFGENY
                     VEYYHDGARAIKKLLIEKQGQVAGAFHRKDLGDIDLVWGEVTDKIKHKGYGLAHIIDK
                     HPELDLKLVSDIIDKGKLNNQNNIRYRIEYKNYIIGLSSEYKGNKRTFIITAFERYKG
                     "
     gene            complement(13540..14016)
                     /locus_tag="RTF91_001153"
     CDS             complement(13540..14016)
                     /locus_tag="RTF91_001153"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MnhB domain-containing protein"
                     /protein_id="HDZ4944035.1"
                     /translation="MKILNLEKNKLKKLQKQKISNSAKKEDKNTEIPSQTFNTQLNFL
                     MENELNAIGKLPKDLADRIVTMLEKSLEYKKDNDNKILDLENKNIEIRKKDIKSYHLW
                     NGFGMVSFLLITIISIGVGLYLILNGHNEGGYFAFILGVLALSPKIIDSIKNKPKN"
     gene            complement(13955..14131)
                     /locus_tag="RTF91_001154"
     CDS             complement(13955..14131)
                     /locus_tag="RTF91_001154"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944036.1"
                     /translation="MTKTQAFIDGFIGKPIKNEYFNLWDLNDIIRKKQAKLYNENIKF
                     REKQIEKIAKTKNI"
     gene            complement(14143..14328)
                     /locus_tag="RTF91_001155"
     CDS             complement(14143..14328)
                     /locus_tag="RTF91_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004306057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944037.1"
                     /translation="MSNINAFLFGFTNMFNADILKATSLKDRKTMITDFYKKSEELRK
                     HSNEEYNAKFEKITKQK"
     gene            complement(14494..14703)
                     /locus_tag="RTF91_001156"
     CDS             complement(14494..14703)
                     /locus_tag="RTF91_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944038.1"
                     /translation="MDIETFEKKLNELELTKKEFANMVGAVYNGVINWNAKGETPKWV
                     DSWLINYEKAKVLDEISKSIKPFIK"
BASE COUNT         5946 a         1683 c         2585 g         4497 t
ORIGIN      
        1 atttttactt ctatctacaa taataaaatc tccattagat aaaataggtt ccatactatc
       61 gccattaatt tttataatat cataactctt ctttataggt atatctaaaa tttcttttag
      121 aaaattttca tcaacggaaa ctattttcac ttcttcactt tgagatgagg ttccaagtcc
      181 tgcacttgca taaatatctg gaaaatatct gaagttaatt tgattatcat ttctaaaaac
      241 atcttgcaat atcacttcgt taaaaggaat atctaatgca ttgcataaaa tttttatata
      301 ttgtggttta ggttttgttt tattatcttc tttagacatc aaccattttt ttattgttgc
      361 ttctgagctt tctatgccat ttttatataa aatttccatc aaatcttgat atgtaacttt
      421 tttatctcta ttttttaaat aaaatttaaa tttttcagta tcaaaatgaa aatcgaatat
      481 atctccattt cttcccatat tctctccttt tttagtataa aaattataca cttttttcaa
      541 gcaaataatg ttccataatt agaaacataa ttaaatattt attaagtttc tttattttat
      601 actttcgtta tgaaaaaaat agattttttt gattttacaa aaatattgag taatcactat
      661 acggttatta gtgttaaaaa gattagaaca aataaatcac gcccaagctt taaaaaacaa
      721 atagagttta aaaaactcta cggaataccg catgaatttt gggtggatgt tcgtagcaat
      781 cttataaaca tacctaagcg tgggagaaaa agaaaggata gagaatgaaa gtgattaaaa
      841 tcagctcttc ttttattagg ccgcacacaa ttaaaagttt tagtgtttat gctgagcaag
      901 aaattattgt acacagtatt ttgaaatatt tcaaagcaaa gagttgaatt atcattatgt
      961 ttttggaaca aaacaaaatt agaaaacaag taaaagatat tagatgaaat agacagttta
     1021 atgtaaaaac tcgcagtaaa taggattttt cgaaaggatt tttttatgaa attagctttt
     1081 ttgatttaca taacatcgat acttgatgat attagtggct tatttattaa tatagctgtt
     1141 ataactttaa ttgctagcat tttcctatta gtcttatttt tttacttcga aattgaagaa
     1201 gacaaagaaa ttgtgaaagg tataaaaaca ggaatgaaga ttttcattcc tgtttgcgtg
     1261 gttgtagtct ttattgcagc tcttatgcca agcaaacaaa ccgcttattt aatggctggt
     1321 gcctatatag gggaactagt cattaaaagt gaatttacga acaagagatt ggaaaaagtc
     1381 atagaaatta tagatttgaa tttggataag caaattaaag aattacaaaa ggtaaataaa
     1441 tgataccaaa ttttatagca agttttgatg tagctttggg gcgtaaaagc ctaagagaga
     1501 gaaaaggcta tttgaaatta tcaaatacta tagcttatgg tggtcttagt gttgatgctt
     1561 tagcattgta tattcaatta gcaaagctta gtgaaaaaac gattgtaagt gagatctatc
     1621 taagagagtt tataaaagtt aaaaataatc aaagaattag cttaaacaga ctaagaattg
     1681 ctaaaaaaga attaattgaa ctaagacttt tagaaattaa aaaggttaga aatggctctt
     1741 taaattttta tgagtggatt ttaaaagatg aaaattatca aattaaaaaa cattttaaca
     1801 aatctttatc tttgcttaaa agcagtgatg aaaagctaat caaaactctt aaaaataaca
     1861 cttcatcaat cgacagaaaa ttaactactg aaaacgaaaa aaatcaaaat tccctatata
     1921 tagaaacacg cacgcacgca cgcgataata aatttataaa taatataaat aataaagaat
     1981 ttacaaaaaa agagaattta gaaaatttaa aaaataatca agaaaagaaa gaacgcgttt
     2041 ctaatcaaaa cgtctctttt gtgacgagct ttattgattt tagcaaaaag gagttagaga
     2101 aaatggcaaa aaaagagttt aaagtcccaa atgcaaatga actcatgaga caaataatag
     2161 cttttaatga gaaaaatggc acaaactttg gtgaagagtt ggctaatgat tttataggct
     2221 attgggatgc tagggaatgg aaaagaaatg aaaaaagaat gtcaagtgtg gcaggtagtc
     2281 tttatacttg gctcaaatac gctaaagaaa acgaaacaag aaaaaatcag cgttttaaca
     2341 gaaaaaaaga agctaatcct agtgtggttg atagcttgat ggagtattac ggaattaaaa
     2401 aagaaaatga agttaatctc ttaggatgct tttaaggagt caaaatgcaa gaaaaaatac
     2461 aaattttaat ggacttattg gaaattaata aggctcaggc aactgatatt gtaggtagat
     2521 atctcaaaag cgttaaggat attcatgctt tcttagattt ttattttgaa actttagaaa
     2581 gagagaatat tgtaggaacc acttatgaga aactaagaag ggtttgtaaa agagctgaaa
     2641 tagagttcaa aaagcgtttt aaagacaagg aaatattttt agaatggctt tgcgataaat
     2701 acaaaaatca agcctgcttt aggctacatg aaggagattt tgagtattcg tattttgcta
     2761 actgcggaaa tggtaaaaag attaaaatta atcaaaaatc aattgatatc ttagtttgtg
     2821 taaatgcttt taagcaaatc tcctataaaa atggcgaacc attagaaaat aatgaattta
     2881 aagaagccct acttgaattt attttcaaaa atcaagacag aataggaaaa aatttgaata
     2941 ttcctttgtt ggttaaaaaa atagagaaag ttttaagcct agaagaaaaa agagaaattg
     3001 aaaaacgtaa agaaagcgaa cttttcgaaa aaaataaaga aaaattttta aagaatttaa
     3061 atcgcatttt aaaaattaat tctattaaca aagcaagggc ttaaaaatgc aaatggctac
     3121 ccgagaatat gatctgtata tagagcttaa agacaatcct attccttata aaagaaccac
     3181 acaaagagca aagtttgtaa gcaaagacta tcttaaatac ttagagttta aaaagcattt
     3241 gcaaatggaa tttttaagac aaaacaaagt gcagtgtttt aaggcttttg atgaaaagaa
     3301 attttatagc attgaattaa aaataggctt taaaaacaaa aagcatggag attgcgacaa
     3361 tatcttaaaa ggcgttttag atgctttgtt taaaaacgac aaaaatgtaa ttaagggtga
     3421 gtatgaatta aaaagttttg aaaaaagttt tttaaaagtg aaaataagtg agtttaaagg
     3481 ggttgaaaat gtataagaaa aaatacacgc gtgaagaagt tgaaaggatg attaatgagt
     3541 atttttcaga agaaaagatt ttgctaagga cgaaagaaag ggatattaaa gaaccaaaaa
     3601 gcatgacagg gcttgcagtt tacatgaaaa cgactaggca gactttgtat gaatggggta
     3661 aagatccgaa tttaagtgat ttaattgaat atgcaaagac tttatgcgaa aacgaagttg
     3721 taacacattc tttggtaaat ctttacaatc cgcaaatgag cactttcatt ttaaaaaaca
     3781 atcatggata tgtggataaa caagaagttg tcagcgataa tgttcaaaaa attgaaatta
     3841 caagaagtga aatcaaatga aattaaaaat cgatttttct tacactccgg cacaacttaa
     3901 agtttttgat gataaaaatc cacgctttat aactgtagca aagggcagaa gacttggttt
     3961 tacaagggga agtgctaagt ttgttatcga aaacttgctt ttaggacaaa atgttttatg
     4021 ggtggatacc atacaagcaa atttacaaaa ttattacgag ttatatttta cacctgagtt
     4081 aaaaaacttg ccaaaagatt tttactcatg gagcgtccaa gacaagaagc taattattaa
     4141 tggagctgtg cttcatatga gaagtgctga aagaagtgaa aatatcgaag gttttggata
     4201 tgaccttgtt atcttaaacg aagcaggaat tattttaaaa ggcagtaaag gagagtatct
     4261 ttggtataac gccatacgcc ctatgctact tgacaatcct aaatcaagag cgattatagg
     4321 cggagtgcct aagggtaaaa atctatttta cgagctgtgc agaaaagaac tcagcgataa
     4381 aaattggaaa cattttcaat tctcaagcta tgataatcca tttttaaagc aagaacagat
     4441 caaagaatta attgaagaag tgggcggtga aggtagtgaa gttgtaaagc aagagattta
     4501 cggagagttt atagatagct ctagtgcaga actttttgcg ttaagtgaaa ttgaaaatgc
     4561 gatgaacaag aactctttta gtattgaaaa aatgcaaggt gaaaatattt ggggacttga
     4621 tgtagcaagg tttggcgatg ataaaagtgt tcttgccaaa agaaaaggat ttgtagttga
     4681 tgagattaaa aaatactcac aacttggaac catggaacta gcaaacaaaa tattggctga
     4741 atacaacaaa agcgaagaaa agccaaaggg tatttttata gatacttgtg gacttggtgt
     4801 aggggtgtat gatgttttgc aaaactatgg cttgcctgtt tttgaagcaa actctgcaaa
     4861 ttctgcaact agtaatgaat acttaaataa aagagcacag atgtatttta tctttgctaa
     4921 aaacttaaaa cacatggagc ttgtaaaaga tgatgagctt aaaaaggata tgagaatgat
     4981 tgaatatgaa tatagcgaca aaggcctatt aaagatagtt tcaaaagagt atttaaaaaa
     5041 gaattatggc aaaagccctg atgttagtga tgcagtggca ctaactttct ttgaaaagct
     5101 atacagcaaa aacaatacta atgaagattg gagttatgat ggctggtgaa tttttaatga
     5161 tttatgatgc tattgatgta aacaaaataa aaaagctttc aaatttaagc gatgaggcta
     5221 taaagtcaag tcttgcaaat gaatttttag agcttgtatc agggtttaat aatatttcta
     5281 aaaagaaatt taaaagagag tttgcggagt ttttatttaa taaaggggta aatgaaaaag
     5341 atgttttaaa aataacaaat ttaagcaaaa caacaatatg gagaattata aatgaaaaca
     5401 aaaagaacta atgatgaaag agtgtcgttt ttaacacaac tcattagcga aagtaaaagt
     5461 ggatatgaaa attacaaacc acattttaag gaattgcaag atgcgtattt gctcgaaaat
     5521 aaagcaatgc aaaggttaag aaaaagaaat aaatcaagta tttacatacc aaaaattaat
     5581 gctaaagtga agtacttaat cactagtcta aatgatgtgt attttaatag cgagagaatg
     5641 gcagatattg aaacttatat taatagcgat gatacgatta tagagctatg gcaaaacgct
     5701 atagattttt atagcggaaa aataaatatg tttaagattt ttcaaccact ttttttagat
     5761 gtattacttg taggcactag catagccaag gttacttggc acaagggaat gccacgcatt
     5821 gaaagagtag atattgatag catattcttt gaccccaacg cattaaatag tgaggatata
     5881 ggatatatag tcaatgaaat ttatttaact tatagtcaaa ttatagaaag acaaaagcta
     5941 ggtttttata aaaaaattga aattgaaaag ctttttaatg aagatgatga gtataaaaaa
     6001 gttaagcttt atgatattta cgaaagaaaa aatgatgatg aatgggttgt ttctactttg
     6061 tttgaaaata atttgctaag aaatgaagtt attttaaaag atggtcagcc ttttatctgg
     6121 ggctcaatgt taccgcaact taaaaaaata gacaatgagg actatgtgag tgcttatggc
     6181 gaacctataa tggcctcggc catgcctttg caagatgaaa ttaatgtcac aagaaatctt
     6241 ttaatagatg ctgttagatc tcatattacg cctaaaatta tcgtagcaaa atcaatgggg
     6301 ataagtagag aagatatcga aactttagga aaaccaatta gtgctgatga tcccaaagga
     6361 gtgcaaatat taccgccacc aaatgtaaat agtgcgggaa tgaatttaca acttttagaa
     6421 agcgaactca cagaagtaac aggagttagt ccacaaaaca atggagctca aactgcacaa
     6481 aatgaaacag caacagaaat tagcataaaa gcacaagaag gtggaagaag aagtgctgac
     6541 tacataagac agtataacga aacttttata gagcctttat ttgatagatt tgcaatgctt
     6601 gtttttaagt atggagaaga tagttttttt aatggttttc aaagagaaga tgttccaagt
     6661 tttagattta aaattcaaac aggtacagga gctatgaata aagaagtaag aagagcagga
     6721 attcaagcta gcatgcaagt attttcacaa ctatatcaaa tgtatatgag tataggcgat
     6781 gccaattctg cttacgggat tatcaatgct agcaaagaac ttactaaaga attattgcca
     6841 attttaggag taaagaatgt aaatagtttg tttgcttttg aaaatacgca aatgcaagga
     6901 gaagctaatg ctgagtatcg aaattaaaag tgatatatct aaaactaaag gaggaaagaa
     6961 attaatagat tttataaaag caaaatatag cgaatgtttt tatatagcaa aaaataatga
     7021 tgagaaagaa ttaaggttaa aagctttaga tactatggct tttttggaca taataatcaa
     7081 taaaataaag gatgaagaag atggaaaatg atgctttaaa agatttaatg aatgtaataa
     7141 cagatgaagg tgatacagga gaagttgcta atagcgaaga acatacacaa ggaataaaag
     7201 aggagcctac tcaagtagca gaaaatgaac ctgattataa agcaatgttt gaagcttata
     7261 aaagtgaaaa tgatagcaaa ttaaatgctt tgatgagtga gcttgaagtt ttaaaaaatc
     7321 caaagaaaga accaagcgaa caagacttac aaagagagca gtatttaaaa gaattaggac
     7381 ttgatggact tgatgagaag ttaaaaagac ttgaagaaat tgacaaaaag caaaaagata
     7441 aagaagaaca agatgcatta atcgctaaat acgcacaagt agaaagtgag ttaagaaaat
     7501 cttatcctga tgctgattta aaagctatgg cagaacttgc cacaaaatta aatggcttag
     7561 gcgaagggaa tatagatagc tggaaaactt tgcttaattt agttggaaaa tcaaataatg
     7621 ctaaaaaagc agaagatttg tcaaacatga ataataatgt aagaactagt gattttaacg
     7681 ataagttaaa aaaaggcgaa gttagtgaga tagatcttgg aaaagaatta ttaagtttag
     7741 tataaaagga gaaacaatgg attttataac agcgttaaaa ggcggaacag gattaggttc
     7801 aacttttgca gatactttga tgaaaacaag caattttact ccaaatctag caagtagtgg
     7861 cagtgggttt ttaaatggat taaaaaattc ttttagtaat tttggagatt ggttatttaa
     7921 aagctctgat gcaaataagg taactaattt tgatagattg ggaaatgttt taggtggcgc
     7981 gggtgcttta tatggtgctt ataatcagca aaaaatggca caaaagaatt ttgacttaca
     8041 aaaagatgct tataacttta ataagttttt agctaatgaa gaattaaata gaagaaagaa
     8101 tatggaaaat aaacttcaaa atgtttggag taattaaata aatttggatt taaggagttt
     8161 gttttaaagg gtaaatctta accccttata taaggggctt tgcttactaa ttgttaattt
     8221 gcattgacaa caataataca aagtagtata ataactatta agatttatag catctttatt
     8281 ttaccgcctt cctaggtggt aatttagtgc taagggtggc gacccttagc accacacctt
     8341 ttaaaattat acataaactt ccttaaatcc tttattttaa aagtaagaat aaaggaaaca
     8401 aaatggcatt ttataatcca caaagagtag tatttaatcc tgatacaggc gttatacaaa
     8461 acgcaggaaa agttggcggt gtcttatata acatcatgag taaaagttat gatgataaag
     8521 ttaaagcaag tcaattccaa caagagcaag atctaaaaaa gcaacaaatg gaatttaatc
     8581 aggctatgca aaataatcag cttttacaaa atgaaagaaa ctttgattat caaaaagaaa
     8641 gagcaaatac agcagatttg caatggcaaa tgaattacaa tcaaaaatct aggcaatatg
     8701 ctatgcaaaa tgctttaaga caacaagaaa taagtgctaa taaggcttac aaggatttaa
     8761 attatcaaaa aggattatta gaactccaaa aattacaaaa tgagataaat acaaaacaaa
     8821 aagaacaaga tctattaaat ggagttcttg ataataatca aggttttaat agtcaaaaca
     8881 ataaaaatct attaaacgat gtaaaatata aagcggacgc tcagttttta gatttagcaa
     8941 gtaatcaagg taaaacatac gacaccacgc acggattttg gaatggagct atagagcgtg
     9001 gttttggtgg ctttggaagt caaagtacag atttaaatga tgcaagtgat ttattcttaa
     9061 aaagaatgca aagtgattta ttaaggggtg gaaaaaatgc taaatggaat ttggaaaata
     9121 tacaagcaaa cttccctatt aacggttaca ctatggaagc aaataatcaa agagtagcgc
     9181 aagcattagc aggagaatgg ttagccgaag ctccaaactc ttttaaaatg gaattagcag
     9241 aaagattagg gagtgccaaa acaagcattg aaagacaaag tgctatagaa gattatcaaa
     9301 aaaatatgga attttataat aactatgctc caaaggtaaa gactttttat tgggatgaga
     9361 aatactcaaa acctagtaaa aatgtagtgg ttataaataa ttcagaaact aaacaaaata
     9421 tgcaaggtga tttagctaaa aatgtattag cagtgcaaaa tcaagatatg ccaaagctac
     9481 ataatgttaa ttttaatgga attaatgcac aaatatcaga acctgatgca aacggcaatg
     9541 taatattagt taatcaagca ggcagaaaaa tgcaagtaag tatagaagaa ttaaaaaaac
     9601 aaggattaat acaatgaata taagagaatt tttattggaa aaaccacaag aaaataatat
     9661 tgttgctttt ttgcaagatg gagtaagtca aagtgaaaat caaaatacaa atgagtattt
     9721 agtaaattta aaaaatgaag taataaatga tttttataaa aataaagaca aatatgctaa
     9781 agaatatgaa aaatataatt tcaaagacca aaatttaaca aatcctatgg gttatattag
     9841 tgaatataaa agagatttgt atgattataa taaaaatcca tctatgaatg ctgatgattt
     9901 aagtaattat attttagata aacaatctaa atttaatgct tctaagccta tttttgccga
     9961 tgataatgaa gtgacaagaa aaagcagtca gtttatgaga gatttgggcg atgaattgca
    10021 aaaatcaggg cgtggaagat tattacaaga taatgatggc tcttattggg tgcaagataa
    10081 taatgggaat tattcaaaag tgcaaggtag cacaatgggt aatttatatc gtggattaag
    10141 agataatggt actagtgtag ttctaggaac agcaggtgcg attggtggta caatgctagg
    10201 tggtggagtt ggtatggtcg caggtggtgc attgggtgca tctttaggcg ctggatatga
    10261 ttactacgga aatacaaaag atacaaatca agatgcaaac ttaaaagaag ctcttatgct
    10321 tatgggggaa aatgcgggac tttctttaat aggtgatgga gtatttgctg gagttgctaa
    10381 aggagcaaga gctttaaaaa atacctataa tatggcaaaa acaggagcac aagccggtaa
    10441 agatatgata gatggcatgg ctgtaaatgg aagtaattta aaggaaaata taggagataa
    10501 gcttagaaaa ataagcccta gtgctttaaa tgatttagct tcgcaaggga gcgaaacttc
    10561 aaaagcttat gcaagagagc taatagaaag tggaaatgga agttatgatg atatactgca
    10621 aaaatcaaga gctatacctt tagaagttaa tcaaggaaat gcattagttg atggagtagc
    10681 aagtaaaata agagatttct cgaatactgc aaaaaatggt tttgcaaaaa atacaaccgg
    10741 caatatagct aattcactaa ataatattag taaaaatata ggttcaaaag aagcagcact
    10801 taatcaacaa gacttaatca atctttcttt tatgaatgat gatttggcta atatggcaag
    10861 gggtgtttta gcaaatgacc ctaaaatggc aaataaagtg gcaaactctt tacatttgca
    10921 agatgaggcc atgcttaaag aattaaattt aaacaatatt tctaaggctg atgggcttta
    10981 tgctttaaga gatgctagag taaaaagggc ttatgatgag tttggaaaag gacttgaaga
    11041 attagataaa ttaagtccaa atggaattac tatagataaa caagcattag ctgatattat
    11101 agataactca ggtgtttatg tagaagctac accggctaaa ataaaagaat ttataaaaga
    11161 agctatgagc ggtggtttag atggaaaaag tgcaaaagaa gtttatgata ggatagatgc
    11221 tataggtaaa aagttaaaag ataactcaag ttataattat agcaggtttt taaatagtct
    11281 taaagatgag tttttagaaa gtatagttag aggctcaaac aataaagagt tatcaaggaa
    11341 aacacttgaa aaaatgagaa gagattatgc agattttaaa gcatatgata aaagcaaatt
    11401 gggagaaaaa ctaaaaggaa gtgaaaaaaa tatatcaaaa gatatagata agatacttaa
    11461 tgaaactaat ccaaaaaaga attacgaagc tataacaaaa gggctcaatg atagcgagat
    11521 taaagttata gataatcaaa tcataactag agctttagaa aaaaataaaa taaatatagg
    11581 agatgctaat aatcctaagt ttgtgctaaa ttacaaagcg gttatggata atcttgaaaa
    11641 ctttaaacca aaaagtaaag caggacaaga gcaaatggaa gttttaaaaa cgataagtaa
    11701 tttacgctct agctttgaca ctataataga tggtatttta aatacaaaat ctaaagagtt
    11761 aggacatgga ataagcacta atcttataga aagagctaaa acaatgcttg ttaataattt
    11821 tactgactat atagcttttt attttatgcg gttatgggaa gttggtaaaa gagctggaac
    11881 aagaatacaa atgcgaaggg gatttagcaa tataaataat ttaaaagatt ttgacagatc
    11941 ggctaaagaa tttatagaaa gtattaaaga taaaacactc aaaaaagaag cacaagaagc
    12001 tagaaaagaa tttaattcaa aggttaaaga tttaatcaaa ggcgacaatt ttttcatgga
    12061 taaacctaat cctaagtatg caaaaagtga ttatactgct aaatttaatg tagaaaaatg
    12121 gattaataat gtttcaggaa ttttaaaaaa tgaatgggtg gtaaatttaa aagctatggc
    12181 taaaaaacac cctgaaatgt ttaaaaacga agcagatgta tttagggtaa ttaaagagat
    12241 aaaagacaat cctactcatt tttttaaaaa ctatgatgat ggagtggcat taatagctaa
    12301 acctttaaaa gatgataagg ttggtaatat ggctataaaa aaagatagcg gcaaaattat
    12361 acatattaat aaaacaaaag gtaaggattt ggaaagatta aatcgtagaa ataaagaaat
    12421 gctgacaggt acgccaactc ctgcaaccac taaaggcagt actaccaatg tggaaggcgg
    12481 tttattacag cattctttta aaaattctac ccaagctaag cctaaaaaaa acttaatgaa
    12541 tgatataaaa gagaatatta agaataaaga agtaaagaaa aagaataaaa aaagcataaa
    12601 gcaaagactt gatgaaaaaa tacaagatga taaaaaggct agtgaagata ttttaaaaag
    12661 atatgatgat tttctaaaag aaaataaaga caataaactt ggttttttag ataagatgaa
    12721 tttaaatgct attgaatata acctaactag acagatgata acaaatgcta aagaaaatac
    12781 aagtaaaggg ataaaaaaag atatcccaag tgctttaagg gctaaaattg aacaagaact
    12841 aaacattaat cctttaaaag aatttggtga aaattatgtc gaatattatc atgatggagc
    12901 aagggctata aaaaaactac tcattgaaaa acaaggacag gtagcaggtg cttttcatag
    12961 aaaagattta ggggatattg atttggtttg gggagaggta acagataaga taaaacataa
    13021 aggttatggt ttagctcata ttatcgataa gcatcctgag ttggacttga aattagttag
    13081 cgatattatc gataagggga aattaaataa ccaaaacaac ataagatata gaatagaata
    13141 taaaaattat attataggtt taagcagtga atataaagga aataaaagaa cttttataat
    13201 tacagctttt gaaagataca aaggataaaa acaacacttt caccgattgt ttttttgcgg
    13261 ttagctcgga caatttacta accaaccttt tatcaattat agcataaatt catgtaatta
    13321 ttttttaaaa tataaaagat aattggaagg gagataatag gattgtgact gcatatgaaa
    13381 agatttaaga gaaaaagcaa gaaggtagca actctcttgc ttttacaaag ggcgagattt
    13441 tgcccttaaa ctcttataat gaaattttag caaacaaagc taaagacgaa attaatgatt
    13501 taaagtattc gatttatctc gtttttttta aaatgtaaat taatttttag gtttattttt
    13561 tatagaatca attattttag gcgaaagtgc caatactcct aatataaaag caaaataacc
    13621 accttcgtta tgtccgttaa gtataagata taatccaacg cctatactaa taatagttat
    13681 aagtagaaaa gataccattc caaaaccatt ccaaagatga taagatttta tatctttttt
    13741 tctaatttct atatttttat tctctaaatc tagtatttta ttatcgttat cttttttata
    13801 ctctaaagat ttttctaaca ttgtcacaat tctatctgct aaatctttag gcaattttcc
    13861 tatagcatta agttcatttt ccataagaaa attaagctga gtattgaaag tttgagatgg
    13921 aatttctgta tttttatctt ctttttttgc agaattagat attttttgtt tttgcaattt
    13981 tttcaatttg tttttctcta aatttaatat tttcattata taattttgct tgtttttttc
    14041 ttataatgtc gtttaaatcc cataaattaa agtattcatt ttttataggc ttacctataa
    14101 aaccatctat aaaagcttgt gtttttgtca ttttggtttt ccttattttt gttttgtgat
    14161 tttttcgaat ttggcgttat actcttcatt gctatgtttt cttaattctt ctgatttttt
    14221 ataaaaatca gttatcattg tttttctatc ttttaaagat gtagctttaa ggatatctgc
    14281 attaaacata tttgtaaagc caaataaaaa agcatttatg tttgacattt ttactcctta
    14341 aaattcttag cttatactga ttttaattaa attatacctt ttttatagtt aacttattct
    14401 tattttatat atttatatat atttcttaat atatttatat attataatct tacttttttt
    14461 aaaataaata atttgcttta aaatacacta tttttatttt ataaaaggtt ttatagattt
    14521 tgaaatttca tctaaaactt ttgctttttc ataattaata agccaactat caacccattt
    14581 aggtgtttcg ccttttgcat tccaattaat aacaccatta taaacagctc cgaccatatt
    14641 tgcaaattct ttttttgtaa gctctaattc atttaatttt ttttcaaatg tttctatatc
    14701 catttaatat c
//
LOCUS       DAPWAA010000040        14190 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.040, whole genome shotgun sequence.
ACCESSION   DAPWAA010000040 DAPWAA010000000
VERSION     DAPWAA010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14190)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14190)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14190
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.040"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..429
                     /locus_tag="RTF91_001157"
     CDS             <1..429
                     /locus_tag="RTF91_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDZ4944039.1"
                     /translation="AYTIKEVEKETKISAHTLRFWAKKGLFPFVQKDENSVKYFSKSD
                     IEWAKWIEWLRISSMPIETIRHYIKLCSLGIKTAKERQDMLKQTKKKLQNQIKILKES
                     EKILAKKIKIYDDMLKEQIDGLNPESKDYQSCDKLHKLKD"
     gene            645..1826
                     /locus_tag="RTF91_001158"
     CDS             645..1826
                     /locus_tag="RTF91_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ4944040.1"
                     /translation="MKNLNKNKTSNSQIILVFCLGVFGILSTELGMMGIIPIVSENFH
                     VSISDAGWSVSIFALVITFCAPIVPLLCANFNPRKLMLVCLGVFIFSSLASVFVNEFW
                     QLLILRAIPAFFHPIYIVLALNMAANWVEDKKEIPKATAKIFAAVSAGMVLGVPMTSY
                     FGGNFSFEAAMLFFVFLNTLSFITTLFFVPDFKKVNPVKISKQLFILRYPLLWVSILC
                     VICINAGIWGFYSYFSDFLHSIAKMDFTLISIVLALYGFSNIIGNHIAGKTLVKNVNS
                     TLILTPLIMIGFYILLFNFYSQIMLVIFAFILGILGGMMNNGTHFLISHPFPKAPDFS
                     NGLFISVANIGLSTGTAICGLVISLSNTRFIAISSVILLSIGIIMILLRGKIQSMKLR
                     F"
     gene            2071..3090
                     /locus_tag="RTF91_001159"
     CDS             2071..3090
                     /locus_tag="RTF91_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDZ4944041.1"
                     /translation="MKNNFFKLLLMILLIGGMNMLYANTWDKVFTQSDKVKMQKVSFK
                     NRYGITLVGDLYIPKNADTKKLSAIAISGPFGAVKEQSSGFYAQTLAELGFAVLAFDP
                     SFTGESEGSPRNVASPDINTEDFSAAVDFLSNLANVDPEKIGILGICGFGGFALNAGS
                     MDTRIKAIVTSTMYNMSRVNAYGYNDSLDKQARYELKKKLNETRTKDFKNGTFAKAEA
                     LPEKLSGNEPQFIKEYWEYYKTKRGFHQRSINSNGAWNATSSLGFINAPILKFSDEII
                     APVFMIHGENAHSRYFSEDAFKNLKGGNKELFIVKNANHVDLYDNADKIPFDRIAEFF
                     KENLK"
     gene            3175..4152
                     /locus_tag="RTF91_001160"
     CDS             3175..4152
                     /locus_tag="RTF91_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDZ4944042.1"
                     /translation="MQKRKLRNLEVSVLGLGCMGMSFGYGEAKDEKDMITLIHKAKDL
                     GIDFFDTAEVYGPFRNEELVGKALKPFRNEVVLATKFGIRIEGDKQIVDSTLSKIRQS
                     LEGSLKRLQIDCIDLYYQHRVDTNVPVEEVANLMSEFYQEGKIKAWGMSEAGVQSIKK
                     AHAVFPLSAVQSEYSLWWREPENELLKVLEELNIGFVPFSPLGKGFLAGKFDANSTFK
                     NNDFRSQVPRFKSENLKANLDLIYALEDIVKSKNATLAQIALAWVLAQKTFIAPIFGT
                     TNLQRLEENINAVNIDFTQEELNHLKSILDKITIKGERYAGEAALRVGK"
     gene            4208..4627
                     /locus_tag="RTF91_001161"
     CDS             4208..4627
                     /locus_tag="RTF91_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDZ4944043.1"
                     /translation="MQELESKGIHGNFKGDSKIFSGNVKVSMMFKVNEWRNFSGALVE
                     FEPNARSAWHTHPQGQTLIVTEGEIITKVPGQKAVIAKKGDVISCPIGVKHFHGATNT
                     NKGVHIALTGEKEGKNVEWLELVSDEEYENALKEAME"
     gene            5146..6222
                     /locus_tag="RTF91_001162"
     CDS             5146..6222
                     /locus_tag="RTF91_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HDZ4944044.1"
                     /translation="MQYKILESNRIASKGYAMLSKNAKFTPFEFTRHAIGDNDILIKI
                     LYAGICHSDIHTARSEWGEATYPCVPGHEIAGEVIAVGKNVSKFKVGDLAGVGCMVNS
                     CGECNACKHSQEQFCEKGQTVFTYNSCDVFHGNENTYGGYSNNIVVSEKFAICVPKNA
                     PMDKVAPLLCAGITTYSPLKFSNIKEGSSVAIAGFGGLGMMAVKYAVKLGAKVSVFAR
                     NENKKAEALAMGVSNFYTSTEKNVVKERFDLIISTIPTPYDPLAYMDLLKFGGEMAIV
                     GLPPHEVSPSINIINFVYKAGKKVYGSLIGGIKETQEMLDFSLKHEIYPEIELIKPSE
                     IDKAYENLTSGKAKFRYVIDMRDE"
     gene            complement(6325..6536)
                     /locus_tag="RTF91_001163"
                     /pseudo
     CDS             complement(6325..6536)
                     /locus_tag="RTF91_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778517.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6544..7449)
                     /locus_tag="RTF91_001164"
     CDS             complement(6544..7449)
                     /locus_tag="RTF91_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_129557825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HDZ4944045.1"
                     /translation="MQTFLDTFKEFLYLFIELSVLFIGINILVTFLNTKYSIFFDKHL
                     KQDNFKTRLKAIFLGSLTPFCSCSSIPLLNAFLKTKVPLSVCIAYLITSPLINPIIVV
                     VFIVSFGLKISLFYVGFLYAIILLITFFLSKIDATKFLNNDFLENNFYEKSSCCSAKK
                     CCTNKTDINFKQFFIDSLKEYKKILPYVLIGTLIGALIHGFFPQDFFEIYLKNYGILG
                     VFIAAFIGVLLYINCTAMIPVALALTQIGIPLELIMSFLITGAGCSFPELILLKRNFK
                     TSFLMLFAFTIILIAILFGILISFI"
     gene            complement(7515..7847)
                     /locus_tag="RTF91_001165"
     CDS             complement(7515..7847)
                     /locus_tag="RTF91_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDZ4944046.1"
                     /translation="MKNTKNSTCNYQECGFNYTLALISGKYKMSVLYCLYKDKIVRYN
                     ELKRILNPISFKTLTNVLRELENAGLIIRKEYPQIPPKVEYSLSKKGQSFIPILEAMC
                     DWGEENKK"
     gene            7967..9157
                     /locus_tag="RTF91_001166"
     CDS             7967..9157
                     /locus_tag="RTF91_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ4944047.1"
                     /translation="MMQNHTTVNNIHQIKILITLCLGVFGLISMELGVMGIIPLISEK
                     FGVSVSDAGWSVSIFALIVMCCAPIAPMLCANFNPKKLMLFCLAIFSLSSLSSMFVNE
                     FWLHLILRAIPAFFHPIYLALAFSTAANLASDKTKVPNIVAKIFMAISAGLVLGVPLS
                     SYFGGNFSFEVAVAFYAMINSLAFFITLFFMPDFKKTTRIKVGKQLLSLRYVLLWISM
                     LATFCISTGYLGFYSYYSEFLFSVSKMSFTNISLALFIYGFASIIGNNIAGKTLVNHS
                     NQTLIFTSLAMILIYALIFVNAKQFSIMLTLSLVLGILNGVMNNAMHYIITFPFPKAK
                     DFCNGLYISVSNISISVGATLCGLVISIKETKYIAISSIIMVGLGLVLVFVRMRLEDK
                     KMKI"
     gene            9176..9760
                     /locus_tag="RTF91_001167"
     CDS             9176..9760
                     /locus_tag="RTF91_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDZ4944048.1"
                     /translation="MKNILLLNGGKSFGHSGGKLNDTLHEVAKESLLNLGLNVNETHI
                     DKGYDIENEVVKILNADVIIYQMPGWWMGEPWIVKKYIDEVFTAGHGKFYANDGRSRE
                     DASKKYGSGGLISNKTYMFSLTWNAPLEAFNDKEQFFEGVGVDGVYLHLHKANQFLGM
                     KPLPTFICNDVMKNPQVEKYIKEYKVHLQKVFKG"
     gene            9778..10701
                     /locus_tag="RTF91_001168"
     CDS             9778..10701
                     /locus_tag="RTF91_001168"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944049.1"
                     /translation="MSLPKYIQGFSFHKDDIIKIQKELRVLKDDEVLIQNKTIGLNPV
                     DWKVKKPKNTIIGVDGAGVAIATNSININIGSRYAYHCDLNFDGSFADYTILKAKALI
                     PLDEHISDTLAASLPCTGLTAMQSLEKLPFIKNKNILIYGCGSMVGKILASLLIKKGA
                     RVYASASEIHHEELYQQGAIKCYNYTENIDIHNLYAIFDTTGKADHLIHKITYYGHMI
                     NILNRVKINPLNLFSTCVSFHEIALGAIHSYGSDEDFSDLIKKGIKLYKRAINKELLL
                     PKLELINFDEIPQKLQSLKEGIKGVKYVAQI"
     gene            11002..11913
                     /locus_tag="RTF91_001169"
     CDS             11002..11913
                     /locus_tag="RTF91_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDZ4944050.1"
                     /translation="MNRLKYLFILLVIAMFLWGLSWPTSKILANYTDTSIITFWRFFF
                     VVIGSFFVLSFLKIPLKLEKTALKWVLIAGILNGLYAFVFFIAIKHGLAGKGGVLVTT
                     MIPIFSYLIFMIAILFQKDEKSNHKITKSEILGLFLGLISGLCLLNLGSIEELFGNFN
                     ALFLSCAFIWALMAVFTNKAKEAHPLAINFYINLISLSMFSWVLFDLKSYEIFHFDLN
                     FWASLFVVAFLSTVVGTSIYYYGIHILGSVKANSFVLITPASALICSFLILDEIPTIL
                     TLIGCVLAIFAIYFINIYGKKNPNHSI"
     gene            complement(11950..12759)
                     /locus_tag="RTF91_001170"
     CDS             complement(11950..12759)
                     /locus_tag="RTF91_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDZ4944051.1"
                     /translation="MKKIISLALALALSVSAAELKMATTTSTDNTGLLDALKPLYEKE
                     SGNTLKWVAVGTGAALKMGEDCNADVLFVHSPKAEKEFIKKGFGVDRTPVMYNDFIII
                     ADKSIASKFKGKNLKESLELIKNEKLTFISRGDKSGTDNKEKSLWKNLGGVPEKQSWY
                     QQSGQGMLASIKIAEEKKGVILTDRGTYIKYEANEKGKPNLVIVNEGDDSLKNFYSVI
                     ATNPKHCKNVNYTEASKFIQWITSNKTLNFIADFKLLNKPLFVIDAKTRKD"
     gene            12836..13525
                     /locus_tag="RTF91_001171"
     CDS             12836..13525
                     /locus_tag="RTF91_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ4944052.1"
                     /translation="MDYILDGLNQALFLLFNTDESVISAIKTTLLSSSVSIVLALLVG
                     FPLGFILGFFDFKFKRFIKLIIDTSLSFPTVAVGLILYALISTRGPLGELGLLFTIKA
                     LILGQFILALPIVIALFSNLIENMNKKHFLLIKSFHLSPLKLVLTVVYELRFALISIV
                     ALAYGRIVAEVGVAMIVGGNIKYDTRTITTAISLETNKGEFASGIALALVLILIAFCL
                     NFITHKLKRIK"
     gene            13522..>14190
                     /locus_tag="RTF91_001172"
     CDS             13522..>14190
                     /locus_tag="RTF91_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4944053.1"
                     /translation="MIEISNLYFNYQNKEILKIKSLKLDTSKISILMGANGSGKSTFL
                     RILKFLEGDFSKNISYFGNFKLNNKQKREIYLLFPEPILLNRSVRANFLFTLKTYGIK
                     EDIKKRIKESLMCLNLDESLLNKYPSELSSGQSQKIAFAIALSVRARYYLLDEPSAFL
                     DKNTTILFKKTILKMHKNFNTGFLIASHDKHFLDSLAQKKLYLHSGEILEFENTNVFE
                     LENQG"
BASE COUNT         4902 a         1778 c         2432 g         5078 t
ORIGIN      
        1 gcttatacta taaaagaagt agaaaaagag acaaaaatta gtgcgcatac tttaagattt
       61 tgggctaaaa aaggtttgtt tccttttgtt caaaaagatg aaaatagtgt gaaatatttt
      121 tcaaaaagtg acatagaatg ggcaaagtgg atagagtggc ttagaatttc aagtatgcca
      181 atagaaacaa ttagacatta tataaagctt tgttctttgg gtataaaaac cgctaaagaa
      241 agacaagata tgttaaagca aacaaagaaa aaattacaaa atcagatcaa aattctaaaa
      301 gaaagtgaaa aaattctagc taaaaaaata aaaatttatg atgatatgct aaaagagcaa
      361 atagatgggc ttaatccaga aagtaaagat tatcaatctt gtgataaatt gcataagctt
      421 aaggattgat tcttatttta aggaaaattt gagtaataat ctttttattt ttctagtgct
      481 atgcagagca agaacaaagt ggcgttaaag cacctaagat atcttcgtat tttaattgat
      541 aatggaaatt aaaaaagaaa tacctaaata aatacaactt actacttgac ttagacctac
      601 tctcatcttt tatactttta aaaaatataa attgaaagga taaaatgaaa aatttaaata
      661 aaaataaaac ttcaaattct caaattattt tagtgttttg tttaggggta tttggaattt
      721 taagcacaga actaggaatg atggggataa ttcctatagt atctgaaaat tttcatgtaa
      781 gtatttcaga tgcaggttgg agtgtgagta tatttgcact tgtaataact ttttgtgctc
      841 ctatagttcc tttgctttgt gcgaatttta atcctagaaa attgatgctt gtttgtcttg
      901 gggtttttat attttcttct ttggcaagtg tttttgtgaa tgaattttgg caattgctta
      961 ttttaagagc aattcctgct ttttttcatc ctatttatat agttcttgct ttaaatatgg
     1021 ctgcgaattg ggttgaagat aagaaagaaa ttccaaaagc tacagctaag atttttgcag
     1081 cggtaagcgc ggggatggtt ttgggtgtgc ctatgactag ttattttggt ggaaatttta
     1141 gttttgaagc agcaatgtta ttttttgtat ttttaaatac tttatctttt ataacaactt
     1201 tgttttttgt tcctgatttt aaaaaagtaa atcctgttaa gataagtaaa caattattta
     1261 tcttaagata cccacttttg tgggttagta tactttgtgt tatttgtata aatgctggaa
     1321 tttggggttt ttattcttat ttttctgatt ttttgcacag tatagcaaag atggatttta
     1381 ctttaattag tattgtattg gctctttatg gtttttcaaa tattataggt aatcatatag
     1441 ccggaaagac tcttgttaaa aatgtaaatt ctactttgat tttaacacct ttgatcatga
     1501 taggatttta tatcttgctt tttaattttt atagccaaat tatgcttgta atatttgctt
     1561 ttatcttagg aattttaggc ggaatgatga acaatggaac acattttttg ataagtcatc
     1621 cttttccaaa agctcctgat tttagcaatg gactttttat aagtgtagcc aatataggat
     1681 taagcacggg aactgctatt tgcggacttg ttatttcttt aagcaatacg cgttttattg
     1741 ctataagttc tgttatttta ctaagcattg gaatcatcat gattttatta agaggtaaaa
     1801 ttcaaagtat gaaactaaga ttttaagtaa tgaaatatca aatgtataaa aatcacaagg
     1861 atattgctga agttttaaaa gagagttaaa ttcctaagga agaacttttt atagagtaaa
     1921 attttgattt tgaatttaga aaatgactga tggatttgga ttaaaataaa agcttttttg
     1981 gtggtatgat taatttttta aaaaaaactc ttgacttaga cctactctca tcttttataa
     2041 ttacaaaaat ttttgaaaag gagatttata atgaaaaata atttttttaa attattgctt
     2101 atgattttat tgattggagg tatgaatatg ctgtatgcaa atacttggga taaagttttt
     2161 actcaaagtg ataaggttaa gatgcaaaaa gttagcttta aaaatcgcta tggtattact
     2221 ttggttggag atttatatat tcctaaaaat gcagacacta aaaaacttag tgcaattgcc
     2281 attagtggtc cttttggagc agtaaaagag caatcttcag gattttatgc acagactttg
     2341 gctgaattgg gttttgctgt tttggctttt gatccttctt ttacaggtga aagtgaggga
     2401 agtcctagaa atgtggcaag ccctgatatc aacacagaag actttagcgc agcagtggat
     2461 tttttaagca atcttgcaaa tgttgatcct gaaaaaatag gtattttagg aatttgtggt
     2521 tttgggggtt ttgctttgaa tgcaggttct atggacacaa ggataaaagc catcgtaact
     2581 tctacaatgt ataatatgag tagggtaaat gcctatggat ataatgatag cttagataaa
     2641 caagcaagat atgagttaaa gaaaaagcta aatgaaacac gcacaaaaga ttttaaaaat
     2701 ggaacttttg ctaaggctga ggctttgccg gaaaaactta gcggcaatga gccacaattt
     2761 atcaaagagt attgggaata ttataaaacc aaaagaggat ttcatcaaag atcgattaat
     2821 tcaaatggcg catggaatgc gacctcatca ctgggcttta taaacgctcc tattcttaaa
     2881 tttagcgatg agataattgc tcctgtgttt atgatacatg gagaaaatgc gcatagtagg
     2941 tattttagcg aagatgcatt taaaaatcta aaaggaggca ataaagagct ttttatcgta
     3001 aaaaatgcta atcatgtgga tttgtatgat aatgcagata aaattccttt tgacagaatt
     3061 gcagaatttt ttaaagaaaa tttaaaataa ggaatgggca tgaaaaagat tttaatgtta
     3121 gccatgctta gcatgacttt tacctttgct aaaataacaa ataaaggata aaaaatgcaa
     3181 aaaagaaaat taagaaattt agaagttagt gttttaggac ttggttgtat gggcatgagc
     3241 tttggttatg gagaagctaa agatgaaaaa gatatgataa cactcattca caaggcaaaa
     3301 gatcttggta ttgatttttt tgatacagct gaagtttatg gtccttttag aaatgaagaa
     3361 ttagtgggta aagcattaaa accttttaga aatgaagtag tattagcaac aaagtttggc
     3421 attaggattg agggtgataa gcaaattgtt gatagtacac ttagtaaaat cagacaaagt
     3481 ctagaaggta gtttgaagcg tttacaaata gattgtatag atctttatta tcaacataga
     3541 gttgatacaa atgttccagt tgaagaagtt gctaatttga tgagtgagtt ttatcaagaa
     3601 ggaaaaatta aggcttgggg gatgagcgag gcaggggttc aaagtattaa aaaagctcat
     3661 gcggtatttc cacttagtgc ggtgcaaagt gagtattctt tatggtggag agagcctgaa
     3721 aatgagcttt tgaaagtttt agaagagtta aatataggct ttgtgccatt ttctccttta
     3781 ggaaaaggct ttttagcggg aaaatttgat gcaaattcta cttttaaaaa taatgacttt
     3841 agatcacaag ttccacgttt taaaagtgag aatttaaaag ctaatttaga cttaatttac
     3901 gcattagaag atatagtaaa atctaaaaat gccactttag cacaaattgc tcttgcttgg
     3961 gtcttagcgc aaaaaacatt tattgcacct atttttggaa caacaaattt acaaaggtta
     4021 gaagaaaata ttaatgctgt taatattgat tttactcaag aagaattaaa tcatctaaag
     4081 agtatcttag acaaaataac aatcaaaggg gaacgctatg caggtgaagc agctcttaga
     4141 gttgggaaat aaaaagattg gtttatttct tataatgatt ttatgtagtt ttcttcaagg
     4201 agtacaaatg caagaacttg aaagcaaagg aattcatgga aattttaaag gagatagtaa
     4261 aatttttagc ggaaatgtaa aagtttctat gatgtttaaa gtcaatgaat ggaggaattt
     4321 tagtggagct ttggttgaat ttgagcctaa tgcgagaagt gcatggcata cacatccaca
     4381 aggacaaact ttaattgtaa cagagggtga aatcatcaca aaagttccgg gacaaaaagc
     4441 cgtaatagct aaaaaaggtg atgtgataag ttgtcctata ggagtaaagc attttcatgg
     4501 agcaaccaac acaaacaaag gagtacacat agcacttaca ggtgaaaaag agggtaaaaa
     4561 tgtagaatgg cttgaacttg tgagtgacga agaatatgaa aatgctttaa aagaagcaat
     4621 ggagtaaaag aattttaaat tacataatat tttgtatttt ttgcaaaagt ttatgagctt
     4681 ttttggattt tctttctaag tgcttaaaat ttcttgcact tcaagcaagg ctttcttttc
     4741 tttaataaat ttggattttt agcacttaga ttataatttc tttatttcaa gttcctttgt
     4801 actgactaga taagaatgag aggtaatttt tctttcttta tagcattaaa attctttaaa
     4861 atacgtatat ttaagggctt attttgttgc ctataagttt gcgtccatcg taaaatagta
     4921 atttcttata atattttctt ctttttaaga actagcataa agctttgtat ttatgagctt
     4981 aatccttgta tcatcttcta aatataaatc ttgcattttt accctaaagt gaaattaaat
     5041 tttgaattat aatttataat aattttttaa aaaaatataa ttttcccttg acttatagct
     5101 actctaatgt tttataatta tagaacaaaa aataaaggag caaaaatgca atacaagatt
     5161 ttagaaagta accgcattgc aagcaaaggc tatgcgatgc ttagcaaaaa tgcaaaattc
     5221 acaccttttg aattcacacg ccatgccata ggtgataatg atattttgat taaaatttta
     5281 tacgcaggaa tttgtcacag cgacattcac actgcaagaa gtgagtgggg agaggcaact
     5341 tatccttgcg ttcctggtca tgaaatagca ggagaagtta ttgctgtagg caaaaatgta
     5401 agcaaattta aagtgggtga tttagctgga gttggctgta tggtaaattc ttgtggtgag
     5461 tgtaatgctt gcaaacattc acaagaacag ttttgtgaaa aagggcaaac tgtctttact
     5521 tacaatagct gcgatgtatt tcacggcaat gaaaatactt atggaggcta ctcaaacaat
     5581 atcgtcgtaa gtgaaaaatt cgctatttgt gtgccaaaaa atgcaccgat ggataaagtt
     5641 gcacctttgc tttgtgcggg aattactact tactcgccac ttaaattttc aaatatcaaa
     5701 gaaggttcaa gtgttgctat agcaggtttt ggcggacttg gtatgatggc ggttaaatac
     5761 gccgtaaaat tgggtgcaaa agtgagtgtt tttgcaagaa atgaaaacaa aaaagcagaa
     5821 gctttagcta tgggtgtgag taatttttac actagtacag aaaaaaatgt agttaaagaa
     5881 agatttgatc ttatcatatc aaccatacca accccttatg atccactagc ttatatggat
     5941 ttactaaaat ttggcggtga aatggccata gtaggattac ctccacatga agtaagccct
     6001 agtatcaata tcatcaattt tgtatataaa gcaggtaaaa aagtatatgg ttcgctcatt
     6061 ggaggtatta aagaaactca agaaatgctt gatttttctc taaaacatga aatttatcca
     6121 gaaattgaac ttatcaaacc aagtgagatt gacaaagctt atgaaaacct cacttcagga
     6181 aaagcaaaat tccgctatgt gattgatatg agagatgagt aaaaatttta aggcttttaa
     6241 gccttaaaat tacaccaaaa aatgaaaagc aaaaaagcca aaaatgctaa aatttttatg
     6301 ctttatcatt ttttatcctc atacttacac attttttcta aatccaataa agtttaaaag
     6361 ctgatcattg ataccataat aagcccaaat tcctttgcgt ttgacataaa aatcccgcat
     6421 cttttaaatt tttaaacgcc ttgaaagtct tgattgtcca tgtttaaaag atgatataag
     6481 ataagcactc tgctttcatt atttaccgca gaaataattg ttaaaaattt ttgtataaaa
     6541 tccttaaata aaactaatta aaattccaaa taaaatggca attagaataa ttgtaaaagc
     6601 aaaaagcatc aaaaaacttg ttttaaaatt tcttttgagt aaaattaatt caggaaaaga
     6661 acatcccgct cccgtgatta aaaaactcat tataagttct aaaggaattc ctatttgagt
     6721 taaagctaaa gccacaggta tcattgccgt acagtttata taaagcaaaa cgcctataaa
     6781 agcagcgata aatactccta aaattccata attttttaaa taaatttcga aaaaatcttg
     6841 tggaaaaaag ccatgaatta atgctccaat aagtgttcct ataagaacat aaggtagaat
     6901 tttcttatat tcttttaaac tatcgataaa aaattgcttg aaatttatat cggttttatt
     6961 agtacagcat ttttttgcac tacaacaact gcttttttca taaaaattgt tttccaaaaa
     7021 atcattattt aaaaattttg ttgcatcgat ttttgataga aaaaatgtga taagtaaaat
     7081 aatagcgtat aaaaatccta cataaaataa tgaaatttta aggccaaaac tgactataaa
     7141 aaccacaact ataatgggat ttattaaagg tgaagtgata aggtatgcaa tacaaacact
     7201 aagtggcact tttgttttta aaaaggcatt taaaagcgga atagatgagc aagagcaaaa
     7261 tggggttaaa gagcctaaaa atatggcctt gagacgagtt ttaaaattat cttgttttaa
     7321 atgtttgtca aaaaaaattg aatattttgt atttaaaaaa gttaccaaaa tattaatccc
     7381 tataaaaagc acagaaagtt ctatgaataa atacaaaaat tctttgaaag tatctaaaaa
     7441 tgtttgcatt atttctcctt aaaaatattt tttgtggaag tataatgcaa atatatcaat
     7501 atatctttat atatttattt tttgttttct tctccccaat cacacattgc ctctaaaata
     7561 gggataaaac tttgcccttt ctttgaaaga ctgtactcta cttttggtgg aatttgtgga
     7621 tattctttgc ggatgattaa gccagcattt tctaattcac gcaaaacatt tgtcaaggtt
     7681 ttaaatgaaa tgggattaag tatccttttt agttcattat aacgcacgat tttatcttta
     7741 taaagacaat aaagcacact cattttatat tttccagaaa ttagagctag agtataatta
     7801 aagccacatt cttgataatt gcaggtagaa ttttttgtat ttttcacgct tgtttcctta
     7861 aagataatac tttactatca gttagtatct aacttttatt tatgtattga cattataact
     7921 tgcataaatt aaaattgtga gtttaatttt tcaaaaaaag gtttttttga tgcaaaatca
     7981 tacaactgta aacaatatcc atcaaatcaa gatcttaatc acgctttgtc taggtgtgtt
     8041 tgggcttatc agcatggagc ttggggtgat gggaattata ccgcttatat cagaaaaatt
     8101 tggtgttagt gttagtgatg cagggtggag tgtgagtata tttgcactta ttgtgatgtg
     8161 ttgtgcgcct attgcaccta tgctttgtgc gaattttaat cctaaaaaac tcatgctttt
     8221 ttgtttggcg attttttctc ttagttcttt gtcgagtatg tttgtaaatg agttttggtt
     8281 acatctgatt ttaagagcaa ttcctgcttt ttttcatcct atttatctag cgcttgcttt
     8341 tagtacagct gcaaatttag caagtgataa aactaaagtg ccaaatatag ttgcaaagat
     8401 ttttatggct attagtgccg gattagttct tggtgtgcca cttagtagtt attttggtgg
     8461 aaatttcagt tttgaagtag ctgtggcttt ttatgcaatg attaattctt tggcattttt
     8521 tatcacctta ttttttatgc ctgattttaa aaagacaact aggatcaaag tagggaaaca
     8581 acttttaagt ttgcgatatg tgcttttatg gatttcaatg cttgccacat tttgtatttc
     8641 aactggatat ttaggttttt attcttatta ttctgaattt ttatttagtg taagcaaaat
     8701 gagttttaca aatattagtt tagcgctttt tatttatggt tttgcaagta ttattggaaa
     8761 caatatcgcg ggaaaaacat tagtcaatca ttcaaatcaa acgcttatat ttacttcctt
     8821 ggcaatgatt ttgatatatg ctttgatttt tgtaaatgca aagcaatttt caatcatgct
     8881 tacattgagt ttagttttag gaattttaaa tggagttatg aataatgcaa tgcattatat
     8941 catcactttt ccttttccta aagcaaagga tttttgtaac ggactttaca taagcgtttc
     9001 aaatatttct attagtgttg gtgctactct ttgcgggtta gttatttcta taaaagaaac
     9061 taagtacatt gcgataagtt ctattatcat ggtgggatta gggcttgttt tagtgtttgt
     9121 tagaatgaga ttagaagata aaaaaatgaa aatttaaaac tataaaggag aaaaaatgaa
     9181 aaatatactt ttgttaaatg gtggaaaaag ttttgggcat tcaggtggca agctaaatga
     9241 tactttgcat gaagtggcaa aagaaagcct tttaaatttg ggattaaatg tcaatgaaac
     9301 gcatattgat aagggttatg atatagaaaa tgaagttgta aagatcttaa atgctgatgt
     9361 gattatctat caaatgccag gatggtggat gggtgagcct tggatagtga aaaaatatat
     9421 tgatgaggtt tttactgcag gacatggaaa attttatgca aatgatggta gaagtagaga
     9481 agatgcaagc aaaaaatacg gcagcggtgg acttataagt aataaaacat atatgtttag
     9541 tcttacttgg aatgcgccgc ttgaagcttt taatgataaa gagcagtttt ttgaaggtgt
     9601 gggtgtagat ggagtgtatt tacatctaca taaagcaaat cagtttttag gtatgaaacc
     9661 tttgccgact tttatttgta atgatgtaat gaaaaatcca caagtagaaa aatatatcaa
     9721 ggaatataag gtgcatttgc aaaaagtgtt taaaggctaa ggaaaatagg atatctaatg
     9781 agtttgccaa aatatataca gggcttttct tttcataagg atgatataat caaaattcaa
     9841 aaagaattgc gtgttttaaa agatgatgag gttttgattc aaaataaaac cataggatta
     9901 aatcctgtgg attggaaagt aaaaaaacct aaaaatacaa ttattggagt agatggtgct
     9961 ggtgtagcta ttgctacaaa tagtataaat attaacatag ggtcaagata tgcttatcat
    10021 tgtgacttaa attttgatgg cagttttgct gattatacta tattaaaagc aaaagctttg
    10081 ataccacttg atgaacatat tagcgataca ttagccgcaa gtttaccttg tacagggttg
    10141 actgctatgc aaagtttaga gaaactccct tttattaaaa ataaaaatat tttaatttat
    10201 ggttgcggtt ctatggtggg taaaatactt gcttctttac ttataaaaaa aggagctagg
    10261 gtttatgcaa gtgctagcga aattcatcat gaagaacttt atcaacaggg tgcgataaaa
    10321 tgttataatt atacagaaaa tattgatata cataacttat atgccatttt tgacactaca
    10381 ggaaaggctg atcatttaat ccataaaatc acttattatg gacatatgat taatatatta
    10441 aatagagtta aaatcaatcc tttaaatctg tttagcactt gtgtatcttt tcatgaaata
    10501 gctcttggtg ctatacatag ttacgggagt gatgaggatt ttagtgattt gattaaaaag
    10561 ggtataaaac tttataaaag agcaattaac aaagaacttt tactcccaaa attggagctt
    10621 ataaattttg atgagatacc tcaaaagctt cagagtttaa aagaaggtat taaaggagtt
    10681 aaatatgtag ctcaaattta gatcaatcct gatttatgat tttttaaatc aggattaatt
    10741 atattttata gcaatttaaa ataaatttta attagtttat gataaaagat atatagtata
    10801 agatttatta tattggataa tttaaaataa aaatggatac attattttaa tgttaaatat
    10861 cctttaaatt tttaaaatta ttgcggtgct aaaaagtaat tttatctaca aatttaaata
    10921 aacattaatt catgttaggt tatattaaac ttggcgtttt aatcataaaa acattattat
    10981 ttaatttcaa aaaggtagta aatgaatcgt ttaaaatatt tatttatctt gcttgttatt
    11041 gctatgtttt tatggggttt atcatggccg acatctaaga ttttggcaaa ttataccgat
    11101 acttctatta ttactttttg gcgttttttc tttgttgtga taggttcatt ttttgtttta
    11161 agcttcttaa aaattcctct taagcttgaa aaaacggctt taaaatgggt tttgatagca
    11221 ggaattttaa atggacttta tgcctttgta ttttttatcg ccataaaaca tggtttagcg
    11281 ggcaaaggag gggttttggt gactactatg attcctatat tttcttattt gatatttatg
    11341 atagcgatat tatttcaaaa agatgaaaaa tcaaatcaca aaattacaaa gagtgaaatt
    11401 ttaggcttat ttttgggttt gatttcagga ctttgtttgt taaatttagg ctccatagaa
    11461 gagctttttg gtaattttaa tgctttgttt ttaagctgtg cttttatatg ggctttgatg
    11521 gctgttttta ccaataaagc aaaagaagct catcctttag cgattaattt ttatattaat
    11581 cttatttcat tatcgatgtt ttcttgggta ttattcgatc ttaagagtta tgagatattc
    11641 cattttgatt tgaatttttg ggcaagcctt tttgtagtgg cttttttatc tacggttgta
    11701 ggcacaagta tatattatta tggaattcat attttaggaa gtgtaaaagc aaattctttt
    11761 gttttaatta cccccgcaag tgctttaatc tgcagctttt tgattttaga tgaaatacct
    11821 actatactta ctttaatagg ctgtgtttta gcgatttttg ctatatattt tatcaatatt
    11881 tatggaaaga aaaatcctaa tcatagtatt taaaatgagt ttttaggcaa ggaatttcct
    11941 tgcttaagtt taatcttttc tcgtttttgc atcaattaca aataaaggtt tgttaagaag
    12001 tttaaaatca gcaatgaaat ttaaagtctt attgcttgta atccattgga taaatttgct
    12061 agcttctgta taatttacat ttttacaatg cttaggattc gttgctataa cagaatagaa
    12121 atttttaagg ctgtcatcgc cttcattaac aattactaaa tttggtttgc ctttttcatt
    12181 ggcttcgtat ttgatataag tgccacgatc ggttaagatt acaccttttt tttcttcagc
    12241 gattttaatg cttgctagca taccttgtcc gctttgctga taccagcttt gtttttcagg
    12301 cacaccacca agatttttcc aaagactttt ttctttatta tcagttcctg atttatctcc
    12361 tcttgaaata aaagtaagtt tttcgttttt gataagttct aaactttctt ttaagttttt
    12421 tcctttaaat ttagaagcta ttgatttatc tgcaatgatg atgaaatcat tatacatcac
    12481 aggggttcta tctacaccaa aacctttttt tataaattct ttttcagctt ttggagaatg
    12541 tacaaaaagc acatcagcat tacaatcttc acccattttt aaagccgcac ccgttcctac
    12601 tgcaacccat tttagggtat tgccgctttc tttttcataa aggggtttta aagcatctaa
    12661 aagccctgta ttgtcagtgc ttgttgtggt tgccatctta agttctgctg cactcacact
    12721 taaagctaaa gcaagggcta aagaaatgat ttttttcatt ttttctcctt agaaatttac
    12781 ataaagaaaa tattttagca taattatgct aaaattactt atttaaagga tatttttgga
    12841 ttatatttta gacggtttaa accaggcttt atttttactt ttcaatactg atgaaagcgt
    12901 aatttcggct ataaaaacta cacttttaag ttcgagtgtt tctatagttt tagccttgct
    12961 tgtaggtttt cctttaggat ttatcttagg cttttttgat tttaaattta aacgctttat
    13021 aaaacttatc atagatacga gcctttcttt tccaacagtt gcagtaggac ttatacttta
    13081 tgcacttatt tcaacacgcg gacctttagg ggaattaggg ctacttttta ctataaaagc
    13141 tttaatttta ggacagttta tcttagcact tccaatagta atcgcacttt tttcaaattt
    13201 gatagaaaat atgaataaaa aacatttttt actcataaaa tctttccatt taagtccttt
    13261 aaagcttgtt ttaactgtgg tttatgaatt acgcttcgct ttaattagca tagttgctct
    13321 agcttatgga cgcattgtag cagaagtagg agtggcgatg atagtgggtg gaaatatcaa
    13381 atacgacaca agaactataa ccaccgccat ttcacttgaa accaataaag gtgaatttgc
    13441 tagcggcata gccttagctt tagttttaat tcttattgct ttttgtttaa atttcatcac
    13501 acataaactc aaaagaataa aatgatagaa atttctaatc tttatttcaa ttatcaaaac
    13561 aaagaaattt taaaaattaa aagtttaaaa cttgacacaa gtaaaattag tattttaatg
    13621 ggggctaatg gaagtggaaa atccacattt ttaagaatat taaaattctt agaaggagat
    13681 ttttcaaaaa atatctctta ttttggaaat ttcaagctta acaataaaca aaaacgtgaa
    13741 atttatttgc tttttccaga acctattttg ttaaatcgta gtgtaagggc aaatttttta
    13801 tttaccttaa aaacttacgg gattaaagaa gatattaaaa aacgcataaa agaaagttta
    13861 atgtgtttaa atttagatga aagcctttta aacaaatatc ctagtgagct ctcatcagga
    13921 caaagtcaaa aaatagcctt tgctatagct ttaagcgttc gtgctaggta ttatttgctt
    13981 gatgaaccta gtgctttttt agataagaat actacaattt tatttaaaaa aactattctt
    14041 aaaatgcata aaaattttaa tacaggcttt ttaattgcaa gtcacgataa gcattttttg
    14101 gattctttag cacaaaaaaa actttacttg catagtggag aaattttaga atttgaaaat
    14161 actaatgttt ttgaattaga aaaccaaggt
//
LOCUS       DAPWAA010000041        13433 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.041, whole genome shotgun sequence.
ACCESSION   DAPWAA010000041 DAPWAA010000000
VERSION     DAPWAA010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13433
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.041"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..993)
                     /gene="mnmH"
                     /locus_tag="RTF91_001173"
     CDS             complement(<1..993)
                     /gene="mnmH"
                     /locus_tag="RTF91_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HDZ4944054.1"
                     /translation="MLSEVEFAEFQKENFSLLIDARSPREFLHSHLIGALNFYALNDK
                     EYQEIGTIYKKNQALAKALGASYICQNTAKHILEITKNFRIGEKIGIYCSRGGLRSKS
                     IAVILSELGFRVVRLKGGFKAYRSFVTRYFENEINLNFFLLCGNTGCAKTELLEQLPQ
                     AINLEKMANHLGSSFGDILGKQPTQKAFEAELFHSMQILENFAFIESESRKIGDIILP
                     LKFYEKMQKAFKIYCFCSLENRVKRIQKIYQEKMTPLKFQQCVQKISPYISLNLRQDL
                     LQSYERKEWQRLIVMLLEYYDKTYKKPNKIDFELNTDDILKAKEEILRYFKLKTT"
     gene            complement(983..1468)
                     /locus_tag="RTF91_001174"
     CDS             complement(983..1468)
                     /locus_tag="RTF91_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HDZ4944055.1"
                     /translation="MQYLYAPWRSEYFEKEKSICPFCDCANMIKSDEELGVIFRAKHC
                     FGVMNRYPYSAGHFMVIPYVHEEHIENLADEIWQEMSHFVRLGVKILKEQIHASGVNI
                     GMNLSKDAGAGIAFHCHYHLVPRWAGDTNFITTIGETRVCGTNIEQVYQKLVLAFKNA
                     K"
     gene            complement(1478..2254)
                     /gene="trpC"
                     /locus_tag="RTF91_001175"
     CDS             complement(1478..2254)
                     /gene="trpC"
                     /locus_tag="RTF91_001175"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HDZ4944056.1"
                     /translation="MILDKIFEKTKEDLKKRKIKLPYDMLGRSLASNPFFPKDVIKAL
                     KRVEKEVKIIAEVKKASPSKGVIREDFDPLSIALNYEKNKAVAISVLTEPHFFKGSLE
                     YLSLIRRYTQIPLLRKDFIFDEYQILEALVYGADFVLLIAKMLSMKELKRLLEFARHL
                     GLEALVEIHDKEDLSKAIFAGADIIGINHRNLEDFTMDMSLCEKLIPQIPNSKIIIAE
                     SGLENKEFLEHLQNLGVDAFLIGEYFMREEDEGKALKALL"
     gene            complement(2251..3528)
                     /locus_tag="RTF91_001176"
     CDS             complement(2251..3528)
                     /locus_tag="RTF91_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent nuclease subunit B"
                     /protein_id="HDZ4944057.1"
                     /translation="MYRNLLFVLVAFFLVACGSSKINVVYPDYKKYKSNDFDLRVMKA
                     YNYEYYKQYKEARDEFLSLYQDYNNSNFLENAFLLTLANNLDKQAELNDLVKPYLNEN
                     DNLKRLSTLYSLNLNDINNAQKLMKGLLAKKDSDPRNLELYGDILVKKNDLKNATKYY
                     RSAYNQVQNEEILFKLIGIYVILNDTLNIKNVLEFSRKTNGCTLKTCVLLAKIYFDEK
                     NIEALKSVYKELYQLTKNKSFALALVELLNSQGKAEEALKVSLQYDLDDDIKFALYQN
                     LKRFDDAKKMSLALYDKTKNKEYLLRAAVFEFEAANEVKKITPKVIDSVKEKFEQGID
                     KDSNALYLNYYGYLLINYDLDVKKGMNLVKLALEKDPQNLYYLDSLAWGYYKLGDCNQ
                     AWEILKQTLKDKEFANSNESKAHIKAIKACIKP"
     gene            complement(3501..3875)
                     /locus_tag="RTF91_001177"
     CDS             complement(3501..3875)
                     /locus_tag="RTF91_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HDZ4944058.1"
                     /translation="MIFDKNFSYAFDENACEKCGGKCCIGESGNIFASKEELEALRKH
                     LNVESKEFTEKYLKKVGFRMSFREVKFEDGFACIFFDTQRRNCSIYDFRPKQCRTFPF
                     WEYFKTHQKELEKECIGICYLS"
     gene            complement(3865..4566)
                     /locus_tag="RTF91_001178"
     CDS             complement(3865..4566)
                     /locus_tag="RTF91_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HDZ4944059.1"
                     /translation="MSDLITLAQLSQGYRYNSDSLILADFVLKQGIKGAVFDVGAGCG
                     IIGILLKKNITNLSLSLIDIQKENIELIEKNLKANQIQADIFHGDFNEFQSVQKFDFI
                     VCNPPFYRQGAYKSEDWHKNMSKFQEFLPLDSFLTKANSILKPNGTLYFCYEALVLDE
                     ICFILKDMKMKIIKLCFVHTYQNKKARLVLIQVKKGVKSPCEILPPFVVYENEILSKQ
                     MQEIHLRFRLKSYDI"
     gene            complement(4572..4721)
                     /locus_tag="RTF91_001179"
     CDS             complement(4572..4721)
                     /locus_tag="RTF91_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944060.1"
                     /translation="MIKIVFFITFVISFLIAESPIKFKEDDNTTKEQNMFKEQSPKRI
                     KIPTH"
     gene            complement(4838..6565)
                     /locus_tag="RTF91_001180"
     CDS             complement(4838..6565)
                     /locus_tag="RTF91_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944061.1"
                     /translation="MLIDEKRLMRNYTLKPAYPSNIGELDAVEVYKQWFTYAMLGVNK
                     YVELLHKQLIRKGRSQIQNINHPLFKNSYIVKKYNIKSSSTAPYNKENYNDLGLNQFF
                     VGQDPYKPYQGNPGSKNGIYHDICEIRTNYNLGSMQYYYGFPDGLILLFEKEKAWKYH
                     GKGFFYIDEKINFKDILNKVLENINYELLINDIEVVIFSQTIQKNNEWVYPSIDDIKI
                     PEIKVENVEFKPTFGKPYKKLCIDVEKFYNDFKELNKNIFRIEKVEITYNVYEKAQKT
                     RESDPSKIYYTLTSKKISFFEVFNSIKENYKCKYATPLCFYNGFNLVCYEEPYVAYSY
                     LNNQSFGKKDTSVTPSVYPLYRKSSNLPYGRRDRWFALWDSFYYLYVYEKSNKGILSF
                     LAPIITIVLAVATWWIGGQGAWLGTLIGVSESVAAGITLGISLGLTVGSLTGNKLFSI
                     LNAVWGLVNFLGTWSANNWNLAADFTKNTAQAAQEMTTFESTLNVVGNLLSGASKIFD
                     VVQSIAADTPDMINKQGDDLDGNEKGNGSEAEELAKDTINPTLWYNFETTDILNEKIE
                     KKEKPIFIF"
     gene            complement(6565..7056)
                     /locus_tag="RTF91_001181"
     CDS             complement(6565..7056)
                     /locus_tag="RTF91_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002792600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944062.1"
                     /translation="MSDVKVDYCKRLEAFKEIYPQILEMSLAEKSPFGEFKKLLDDFG
                     NENVIRNDQQFQSLAQALVSVGQTIVAQSQNTALSMILQGDENELNAEKALLLKAQTE
                     TEKAKPALIARQTAQIDDNLRIEAAKVTQSVQFGYCTGGLDIPQEIMKLVKEKIENIE
                     KSS"
     gene            complement(7049..7297)
                     /locus_tag="RTF91_001182"
     CDS             complement(7049..7297)
                     /locus_tag="RTF91_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944063.1"
                     /translation="MKIILPSFLTVWLIGCGTTTQQVITKVEIQKVRIPNELLNLSPL
                     EKPIANNELDILNAYSMLFYEYKRCQIQINKIKELNDE"
     gene            complement(7200..7583)
                     /locus_tag="RTF91_001183"
     CDS             complement(7200..7583)
                     /locus_tag="RTF91_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944064.1"
                     /translation="MINLLFGNAKLYIALALMAALAGYFYLRLDSTQAKLEKSQNDLN
                     IALQVNENNEKKLKELSQIHKAELKALNDANTQKNEVRERVQYVKEYIYKSNENNFTK
                     LFNGMVDRLWDYNSTSNNQSGNSKS"
     gene            complement(7586..8062)
                     /locus_tag="RTF91_001184"
     CDS             complement(7586..8062)
                     /locus_tag="RTF91_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944065.1"
                     /translation="MKITINRRYVGKTCVIGKFKVLSDDDKIIFECFALERKEEGLES
                     GKNLRIPAGVYNLKRHVGSSFNDKGKQEVAGVVVLKKDDSVINLYNDKVAFERHILIH
                     WGNTYKDSKGCILLGMAKTNDNEKIGSSRQACKEFYNLMYDKDLSNIKLEIVNELA"
     gene            complement(8130..9257)
                     /locus_tag="RTF91_001185"
     CDS             complement(8130..9257)
                     /locus_tag="RTF91_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944066.1"
                     /translation="MSLEQVISTQNESLNQIISSLEGLVLSYKNNGVNLEEIKKIINA
                     NLEEMNINEESLKESILEIVLENKESLKGDTGKSAYEIWLENEENKGKSEDEFLASLK
                     GKIPAKEEIKPIVEEVLENMNLNSGINGIKVSTSKPTPKTKANVNDLIITYNENLRQF
                     WLCVASDDKYTSWVNLLGNENITAEDLIIISFDANLGSGSYGGCLSDLRFGFENALAS
                     TTQIVKGLNEGSFLITKDGRGLNSKNYTEVNILSKPSQNQIEGRIKTSGIYNDSTWHN
                     ITNALKKYDGNANECCLWISNVKHSVSVELLTNEFPTNLFYRKDGYYGNVNLSNIKMQ
                     KVLRTQNEILIEQSFVGIKKEIDRDIYGNNAFLFEFEEKGA"
     gene            complement(9254..9628)
                     /locus_tag="RTF91_001186"
     CDS             complement(9254..9628)
                     /locus_tag="RTF91_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1353 domain-containing protein"
                     /protein_id="HDZ4944067.1"
                     /translation="MTKTELKRVCVKPFDKDRFEVISDYAFSLPNYKGIVPKGFKTDG
                     ASIPRLFWSLFPPFKSEYFSACVIHDYLCINAKSRDDYRLADLVLKEAMQILGINKFK
                     IFVFYCSCNLFHEIKCLIKGIR"
     gene            complement(9621..10004)
                     /locus_tag="RTF91_001187"
     CDS             complement(9621..10004)
                     /locus_tag="RTF91_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944068.1"
                     /translation="MSAENIIKEGAILGSLSGSALLGLMVFVLAGIAWHLYKTLHKES
                     GEKTKELISETKNTNILIREQIAVSRASSDSLVKFIETHCSKTNDKLEAIETDLMRMD
                     ERLVKLTQIRNDELRSIFKKKENND"
     gene            complement(9994..10635)
                     /locus_tag="RTF91_001188"
     CDS             complement(9994..10635)
                     /locus_tag="RTF91_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HDZ4944069.1"
                     /translation="MFYDIKNKSLKYDDIFLKDVKIQSEEGEIDAQDTYFLSVCDDKL
                     LKELGFAKVKEEEIPSFNEKIEELRQIQTYDEENNLYIISYEIKEKALEELKELKLEE
                     LKAIKEEKLLFMPFKDATFQIDTEAKVNISGKVSEIMLANLNNAPLENITWIDKDNKI
                     ITFNKEEFLEFGVSIAKYTESIIFKNDELRNRVKNATSLEELNLITWESENEC"
     gene            complement(10648..11097)
                     /locus_tag="RTF91_001189"
     CDS             complement(10648..11097)
                     /locus_tag="RTF91_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944070.1"
                     /translation="MNCLLLSNNGIALNLPPSLGGSVANYNYMLKLDMIYKQAVVLPS
                     NINNKEVVMLGEVWTTGNMSNKTSANTLHITWSNFNSSVELHALSKYYTANAKIKVEK
                     KFNFGNIDNLQIMLSSWQSGSANASAGWNLSDGNRLNPRASLTLYWN"
     gene            complement(11099..>13433)
                     /locus_tag="RTF91_001190"
     CDS             complement(11099..>13433)
                     /locus_tag="RTF91_001190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944071.1"
                     /translation="FSLNKQEIQNIKFFLENNAEEFENLKKDIHKYEEIKFNLDSYIN
                     EIKQNKDFVEEYFNLNIKIKDEILSELNHALEIVDNLHLNVDELKEIKPELINIKKEV
                     KDLAKEAKLVVSEASEIIKNKINTIFFENQRLNQEMVNSVKKLEEIKFDIGIKYKEIA
                     SAYDLLLESKQNIEDLRDVIALYKEFENDVISYSEIIKDFKNKIENLEQDLNSKSENI
                     HTSLDDKQNEILKNLDDVKNEALTKFDELTAKYEGYKVHFEQSYDRFNERALIADENL
                     GRLAEVAKKELGDDKLIYETELKALRDEIISTMNEISNDLSNEKNEALFIFDNKKQEF
                     ITLVDTSKIMIDNLNNIFNTNYQEKKNEFNLLFNEKLYSLGENTQDFLNELEVKKESG
                     LNEINETKEQNLNVLEIKKDECIDNIDNQAKIYDISGIKANVEYIFSLMKNDENEEEQ
                     AKEDIKDLEQDLSQKVQELENIKNQIEETLRNDEILQNKKEELEELKKQIDEALVKEP
                     PEDTSELEKQKDELEQEITQIEQELTSDLISKKEELEQEITKRQEDLENKQDELEQIQ
                     EDKSLVTKRMLDEEVAKLDDKLENEINKIDFGLSDKVSNSENEEIVGSKTFVKPILVS
                     ANPTNDNHLTNKAYVDTALNKKANLNEDNVFNGANIFNQVLIAPTNPTNDNHLTRKWY
                     VDYGGGIKNLGATGSINLDLRQAQHFILTMTARGAIGIANWASAGKSGTITVNNAQNI
                     TAFSAPFRFRIAQSGFSGTETFAYFCIASNNVRLVRT"
BASE COUNT         4243 a         2372 c         1448 g         5370 t
ORIGIN      
        1 tgtagttttt aacttaaaat atcttaaaat ttcttcttta gcttttaaaa tatcatcagt
       61 atttaactca aaatcgattt tatttggctt tttataagtt ttatcataat actctaaaag
      121 cataacaata agcctttgcc attcttttct ctcataactt tgaagtaaat cttggcgtaa
      181 atttaagctg atataaggac tgattttttg cacacattgt tgaaatttca aaggagtcat
      241 tttttcttga taaatttttt gtattctttt aacacgattt tctaaagaac aaaaacaata
      301 aattttaaaa gccttttgca tcttttcata aaattttaaa ggcaggatga tatcacctat
      361 tttacgactt tcactttcta taaaagcaaa attctctaaa atttgcatac tgtgaaaaag
      421 ttctgcttca aaagcttttt gcgtaggttg ctttcctaaa atatcaccaa aagatgaacc
      481 taaatgattt gccatttttt ccaaatttat agcttgtgga agctgttcta aaagctctgt
      541 tttagcgcat cctgtattgc cacaaagcaa gaaaaaattt aaattgattt cattttcaaa
      601 ataccgtgtt acaaaacttc tataagcctt aaacccacct tttaaacgca ctactctaaa
      661 gccaagttca cttaatatca ctgcaataga ttttgaacgt aagcctccac gagagcaata
      721 aatccctatt ttctcaccta tacgaaaatt tttagtaatt tctagtatat gtttagcagt
      781 attttgacaa atataacttg cacccaaagc tttagctaag gcttgatttt ttttataaat
      841 cgttcctatt tcttgatatt ctttatcatt gagtgcataa aaatttaaag ctcctatcaa
      901 atgagaatgc aaaaattctc taggacttct tgcatcaatt aaaagagaaa aattttcttt
      961 ttgaaattct gcaaattcaa cttcacttag catttttaaa agccaaaaca agtttttgat
     1021 aaacttgctc tatattagtg ccacaaaccc tagtttctcc tatggttgta ataaaatttg
     1081 tatcccctgc ccaacgcggc actaaatgat aatgacaatg aaaagctatg ccagctcctg
     1141 catctttgct taaattcatg ccaatattaa ccccgcttgc atgaatttgc tcttttaaaa
     1201 ttttcactcc taaacgcaca aaatggctca tttcttgcca aatttcatca gccaaatttt
     1261 ctatatgttc ttcatgcaca taaggaatca ccataaaatg ccctgcagag taaggatagc
     1321 ggttcatcac tccaaaacaa tgctttgctc taaaaatcac acctaattct tcgtcacttt
     1381 tgatcatgtt agcgcagtca caaaaaggac aaatactttt ttctttttca aaatactcac
     1441 tccgccatgg tgcatacaaa tactgcattt tccctcctta aagcaaagct tttaaagcct
     1501 ttccttcatc ttcttcacgc ataaaatatt caccgattaa aaaagcatca acacctaaat
     1561 tttgtaaatg ctctaaaaat tctttatttt ctaaaccact ttctgcaatg ataatttttg
     1621 aatttggaat ttgcggaata agcttttcac acaaactcat atccatagta aaatcttcta
     1681 aattacggtg gttaataccg ataatatcag ctccagcaaa aatagcctta ctcaaatcct
     1741 ctttatcgtg aatttcaacc aaagcctcaa gtcctaaatg tcttgcaaac tcaagcagtc
     1801 ttttaagttc tttcatactt agcattttag cgattaaaag cacaaaatcc gccccgtaaa
     1861 ctaaggcttc caaaatttga tattcatcaa agataaaatc ttttctaagc aaaggaattt
     1921 gcgtataacg gcgtataagg cttaaatatt ctaaagaacc tttaaaaaaa tgaggctcgg
     1981 ttaaaacaga aatcgctaca gctttgtttt tttcataatt taaagcgata cttaaagggt
     2041 caaagtcttc tctaataact cctttactag gacttgcttt ttttacttct gctatgattt
     2101 taacttcttt ttctactctt tttaaagcct taatcacatc ttttggaaaa aaaggatttg
     2161 aagctaaaga acgccctaac atatcatagg gaagttttat tttgcgtttt tttaaatctt
     2221 cttttgtttt ttcaaaaatt ttatctaata tcatggtttt atacacgcct ttatcgcttt
     2281 tatatgtgct ttactctcat tagaatttgc aaattcttta tcttttaatg tttgttttaa
     2341 aatttcccat gcttgattac aatcacctaa tttataatat ccccaagcca aagaatccaa
     2401 ataatacaaa ttctgtggat ctttttctaa agcaagctta accaaattca tacctttttt
     2461 aacatctaaa tcataattta taagcaaata tccatagtag tttaaataca aagcattgct
     2521 atctttatca ataccttgtt caaatttttc tttcacagaa tcaatcactt ttggagtaat
     2581 ttttttaact tcgtttgcag cttcaaattc aaaaactgct gcccgtaaaa gatattcttt
     2641 attttttgtt ttatcataaa gagctaaact cattttctta gcatcatcaa agcgttttaa
     2701 attttgatac aaagcaaatt tgatatcatc atctaaatca tattgtaaag aaacttttaa
     2761 agcctcttct gctttgcctt gagaatttaa aagttcaact aaagccaacg caaaactttt
     2821 attcttagta agctgataaa gctctttata tacgcttttt aaagcttcta tatttttttc
     2881 atcaaaataa attttagcaa gcaagacgca agttttgaga gtgcaaccat tagtttttct
     2941 tgaaaattct aaaacatttt taatatttaa agtatcgttt aaaatcacat aaattcctat
     3001 aagtttaaac aaaatttctt cattttgcac ttgattataa gcggatctat agtattttgt
     3061 agcatttttt aaatcatttt ttttaactaa aatatcaccg taaagctcta aatttctagg
     3121 atcgctatct ttttttgcta aaagtccttt catgagtttt tgagcattgt tgatatcatt
     3181 taaatttaaa gaataaagag tgctaagtcg cttaagattg tcattttcat ttaagtaagg
     3241 ctttactaaa tcattcaact ctgcttgttt atcaagatta tttgccaaag taagcaaaaa
     3301 tgcattttct aaaaaattac tattattata atcttgataa aggcttaaaa attcatctct
     3361 ggcttctttg tattgtttat aatactcata attataagcc ttcattaccc ttaaatcaaa
     3421 atcattgctt ttatattttt tataatcagg ataaacaaca ttgatttttg aacttccaca
     3481 agccaccaaa aaaaaggcca ctaagacaaa taacaaattc ctatacattc tttttctaat
     3541 tccttttgat gtgttttaaa atactcccaa aatggaaaag ttctacactg ttttggacga
     3601 aaatcgtaga tgctacaatt tcttctttga gtatcaaaaa aaatgcaagc aaaaccatct
     3661 tcaaatttaa cttctctaaa actcattcta aagcccactt ttttcaagta tttttcagta
     3721 aattctttac tttctacatt taaatgcttt cttaacgctt ccaactcttc cttactcgca
     3781 aaaatattac cactttctcc aatgcaacac tttccgccgc atttctcaca agcattttca
     3841 tcaaaagcat aagaaaaatt tttatcaaat atcataactt tttaacctaa atcttaagtg
     3901 aatttcttgc atttgtttgc ttaaaatttc attttcatat acaacaaaag ggggtaaaat
     3961 ctcacaaggt gattttacac ctttttttac ctgtatcaaa acaagccttg cttttttgtt
     4021 ttgatacgta tgcacaaaac aaagctttat tattttcatt ttcatatctt ttaaaataaa
     4081 acaaatttca tctaagacta aagcttcata gcaaaaatac aaagtgccat ttggtttgag
     4141 tatggaattt gctttagtta aaaagctatc caagggtaaa aattcttgaa atttactcat
     4201 atttttatgc caatcttcgc tcttataagc tccttgtcta taaaatgggg gattacaaac
     4261 tataaaatca aatttttgca cgctttgaaa ctcattaaaa tcaccgtgaa aaatatcagc
     4321 ttgtatttgg ttggctttta aatttttttc aatcaattct atattttctt tttgaatatc
     4381 aatcaaagat aaacttaaat ttgtgatatt ttttttaagc aaaataccta taataccaca
     4441 acccgcacct acatcaaaaa cagcgccttt aataccttgt tttaaaacaa aatcagccaa
     4501 aatcaaagaa tcactattat aacgatatcc ttgggataat tgtgctagtg taatcaaatc
     4561 tgacatatat cttaatgagt tggaatttta atgcgttttg gagattgctc tttaaacata
     4621 ttttgttctt ttgttgtatt atcgtcttct ttaaatttta tcgggctttc cgctattaaa
     4681 aaagaaatta caaaagttat aaaaaaaaca atttttatca taataacacc tcataaattg
     4741 gtgtccacgg cggacactaa acaatagcta taaaatacgc taaaatataa atttgaaata
     4801 tttaaattta tatttggcta caaaatggct acaaaaatta aaatataaaa ataggttttt
     4861 ctttcttttc tattttttca tttaatatat ctgtagtttc aaaattatac cataaagttg
     4921 gattaattgt atcttttgct aattcttcag cttcacttcc atttcccttt tcattaccat
     4981 ctaaatcatc tccttgttta tttatcatat caggcgtatc tgctgcaatg ctttgaacaa
     5041 catcaaaaat cttactcgcg ccacttagca aatttccaac aacatttaaa gttgattcaa
     5101 aagttgtcat ttcttgtgcc gcttgtgccg tattttttgt aaaatctgca gctaaattcc
     5161 aattattagc actccaagta cctaaaaaat taactaaacc ccaaacagca ttaagaattg
     5221 aaaataattt atttccagtt agagagccta cagtcaaacc taagctaatt cctaaagtaa
     5281 ttcctgctgc aacactctcg ctaactccta ttaacgtgcc aagccatgca ccttgtccac
     5341 caatccacca agtagctacg gctaaaacaa ttgtaataat aggagctaaa aaacttaaaa
     5401 ttcctttatt tgatttttcg tacacataaa gataataaaa actatcccat aatgcaaacc
     5461 atctatctct acgcccataa ggcaaatttg aactttttct atatagcgga tatacgcttg
     5521 gcgtaacact tgtatctttt tttccaaagc tttgattatt gaggtaagaa taagcaacat
     5581 aaggctcttc ataacaaact aaattaaaac cattataaaa acataaagga gttgcatatt
     5641 tgcatttata attttctttt attgagttaa atacttcaaa aaaagatatc tttttgcttg
     5701 ttaaagtata atatatttta ctcggatcac tctctctagt tttttgtgct ttctcatata
     5761 cattataggt tatttctact ttttcgattc taaatatatt tttatttaat tctttaaaat
     5821 cattataaaa tttttcaacg tcaatgcata attttttata aggctttcca aaagttggtt
     5881 taaattcaac attttctact ttaatttctg gtattttaat atcatcaata ctaggatata
     5941 cccattcgtt atttttttga atagtttgag aaaaaataac aacttctata tcatttataa
     6001 gcaattcgta atttatattt tctaatacct tattaagtat atctttaaaa tttatttttt
     6061 catcaatata aaaaaatcct tttccgtgat atttccaagc tttttctttt tcaaacaaaa
     6121 gaattaagcc atcaggaaaa ccataataat actgcatact tcctaaatta taattggttc
     6181 ttatttcaca aatatcatga tatattccat ttttgctacc aggatttcct tgatagggtt
     6241 tataagggtc ttgtcctaca aaaaattgat taagtcctaa atcattataa ttttccttat
     6301 tgtaaggtgc agtgctagaa cttttaatgt tatatttttt cactatatac gaatttttaa
     6361 atagtggatg gtttatattt tgaatttgac ttctaccttt tcttataagc tgtttatgta
     6421 aaagctctac atatttattt acgcctaaca tagcgtaagt aaaccactgt ttataaactt
     6481 ccacagcgtc taattctcct atatttgatg gatatgctgg cttaagagta taatttctca
     6541 taagcctttt ttcatctata agcattatga agacttttct atattttcta tcttttcttt
     6601 aacaagcttc ataatttctt gtggtatatc aagaccaccg gtacaatatc caaattgaac
     6661 actctgtgta acttttgcag cttctattct taagttatca tctatttgtg cggtttgtct
     6721 agctattaat gcgggttttg ctttttctgt ttctgtttgt gcttttaaaa gtaaagcttt
     6781 ttcagcatta agctcatttt catcgccttg caaaatcata gataaggcgg tattttgact
     6841 ttgtgctact atagtttgtc caacgcttac taatgcttgt gccaaacttt gaaattgttg
     6901 gtcattccta ataacatttt cattcccaaa atcatccaaa agctttttaa attccccaaa
     6961 aggagatttt tctgctaagc tcatctctaa aatttgcgga taaatttctt taaaagcttc
     7021 aagtctttta caataatcaa cttttacatc actcatcatt caactcctta atcttattga
     7081 tttgtatttg acaacgctta tactcgtaaa aaagcataga ataagcattt aaaatatcaa
     7141 gttcattatt tgctatcggt ttttcaagtg gacttaaatt caacaactca ttaggaattc
     7201 taactttttg aatttccact ttggttatta cttgttgagt tgtagtccca caacctatca
     7261 accataccgt taaaaagctt ggtaaaatta ttttcattgc ttttgtaaat gtattcttta
     7321 acatattgca ccctttccct aacttcattt ttttgcgtat ttgcatcatt taaggctttt
     7381 agctctgctt tatgaatttg actaagctct tttagctttt tttcattatt ttcattgact
     7441 tgcaaggcta tgtttaaatc attttggctt ttttctaatt ttgcttgagt gctatcaagt
     7501 cttagataaa aatatccagc caaagcagcc attaaagcta atgcaatata aagctttgca
     7561 tttccaaata aaagatttat catatctatg ccaattcatt cactatttca agcttaatat
     7621 ttgataaatc tttatcatac atcaaattat aaaattcttt acatgcttgc ctacttgacc
     7681 ctattttttc attgtcgtta gtttttgcca tccctagtaa aatacaacct ttactatcct
     7741 tgtaagtatt accccaatga ataagaatgt gtctttcaaa tgcaacttta tcattgtaaa
     7801 gattgataac actatcatct ttttttaaca ctacaactcc tgcaacttct tgcttgcctt
     7861 tatcattaaa gctagagcct acatgccttt ttaagttata aacccctgca ggaattctta
     7921 aattcttacc gctttctaaa ccttcttcct tcctttccaa agcaaagcat tcaaaaataa
     7981 tcttatcatc atcacttaaa accttaaatt tacctattac gcaagttttt cctacatatc
     8041 ttcgattaat tgttattttc attttaattc ctttttttat tttttgtgtt ttattttaat
     8101 tttgataagt atttgtattt ttctatatct taagctcctt tttcttcaaa ttcaaataga
     8161 aaggcattat tgccgtaaat atctctatcg atttcttttt ttatgcccac aaagctctgt
     8221 tcgattagaa tttcattttg agttctaagg actttttgca tttttatatt tgaaagattg
     8281 acatttccat aatacccatc ctttctgtaa aataaatttg tagggaattc atttgtaaga
     8341 agctctacgc ttacactatg ttttacatta gaaatccaaa gacaacattc attcgcattg
     8401 ccgtcgtatt ttttaagagc atttgtgata ttatgccaag tagaatcgtt ataaattcca
     8461 ctcgttttaa ttctaccttc tatttgattt tgacttggtt ttgaaaggat gttgacttca
     8521 gtataatttt tagaatttaa acccctgcca tccttggtaa ttaaaaagct accttcatta
     8581 agccctttta caatttgcgt ggtgcttgcc aaagcatttt caaagccaaa acgcaaatca
     8641 ctcaaacatc caccataact gccactacct aaatttgcat caaagctaat gataattaaa
     8701 tcttccgccg taatattttc atttccaagt aaattaaccc aacttgtgta tttatcatca
     8761 cttgccacgc aaagccaaaa ttgtcttaag ttttcattgt aagtgatgat taaatcatta
     8821 acattagctt tagtttttgg agttggctta gaagtagata cttttattcc attaatgcct
     8881 gaatttaaat tcatattttc aagcacttct tctacaatag gtttgatttc ttcttttgca
     8941 gggattttac ctttcaaact cgctaaaaac tcatcttcgc tttttccttt attttcttca
     9001 ttttcaagcc aaatttcata agcactttta cctgtatcac cttttaaact ttctttattt
     9061 tctaaaacaa tttctaaaat gctttctttt aagctctctt cattaatgtt catttcttct
     9121 agatttgcat tgattatctt tttaatctct tctaaattta caccattatt tttataggat
     9181 agaactaatc cttctaaact acttataatt tgatttaaac tttcattttg agtacttata
     9241 acctgttcta aactcatctt atccccttta ttaaacattt gatttcatga aataaattac
     9301 aagagcaata aaaaacaaaa atcttaaatt tatttattcc taaaatttgc attgcttctt
     9361 ttaaaacaag atcagctagc ctataatcat ctcttgattt tgcatttata cacaagtagt
     9421 catggataac acaagcacta aaatactcac ttttaaaagg tggaaataaa gaccaaaaaa
     9481 ggcgtgggat acttgcccca tctgttttaa atccttttgg aacaatgcct ttataatttg
     9541 gcaaagaaaa agcataatcg ctaatcactt caaatctatc tttgtcaaaa ggctttacac
     9601 aaaccctttt taattctgtt ttagtcattg ttttcctttt ttttaaaaat acttcttaat
     9661 tcatcatttc ttatttgagt aagcttaaca agcctttcat ccattctcat aagatctgtt
     9721 tctatagctt ctagcttgtc attggttttt gagcaatgtg tttctataaa tttaaccaaa
     9781 ctatcgctac ttgctctgga tactgcaatt tgttctctaa tgagaatatt agtatttttg
     9841 gtttcactta taagttcttt tgttttttcc ccagattctt tatgtaaagt tttatataaa
     9901 tgccatgcaa tcccagctaa gacaaaaacc attaatccta ataatgctga tccacttaaa
     9961 gaacctagaa tagcgccttc ttttattata ttttcagcac tcattttcac tttcccatgt
    10021 aattaaattt aattcttcta aagatgtggc attttttact ctatttctta actcatcatt
    10081 tttaaaaata atactttcag tatatttagc gatactaacc ccaaattcta aaaattcttc
    10141 tttgttaaat gtaatgattt tattatcttt atcaatccaa gtaatatttt ccaaaggagc
    10201 gttattaaga tttgctaaca ttatctcact aacttttcca ctaatattaa cttttgcttc
    10261 cgtatcaatt tgaaatgtag catccttaaa aggcataaat aaaagctttt cttcttttat
    10321 agcttttaat tcttctaatt ttaattcctt taactcttct aatgcttttt ctttaatttc
    10381 gtaagaaata atataaagat tattttcttc atcataagtt tgaatttggc gaagttcttc
    10441 aattttttca ttaaaacttg ggatttcttc ttctttaact ttagcaaaac caagctcttt
    10501 taaaagctta tcatcacaaa cacttaaaaa ataagtatct tgcgcatcaa tttcaccttc
    10561 ttcactttgt atttttacat cttttaaaaa aatatcatcg tattttaaac ttttattttt
    10621 tatatcgtaa aacatattct tcctttctta gttccagtat aatgttaaac ttgctctagg
    10681 atttaatcta tttccatcac ttaagttcca accagcactt gcatttgcac taccactttg
    10741 ccaagaactg agcattattt gtaaattatc aatatttcca aaattgaatt ttttctctac
    10801 tttgattttt gcattggcag tgtaatattt acttaaagca tgcaattcta cactagagtt
    10861 aaaattactc catgtgatat gcaaagtatt tgcagaagtt ttattagaca tatttccagt
    10921 cgtccaaact tcgcctaaca taactacttc tttattatta atatttgatg gcaataccac
    10981 tgcttgttta taaatcatgt ctagctttaa catataatta taatttgcaa ccgagcctcc
    11041 taaagatgga ggtaaattta gtgctatacc attattagaa agaaggagac aattcatttt
    11101 aagtccttac taatcttaca ttattcgaag ctatgcaaaa atacgcaaag gtttctgtac
    11161 cactaaaacc actttgggct attctaaatc taaaaggagc cgaaaaagca gtgatatttt
    11221 gagcattatt gacagtgata gttccacttt tgccagcact agcccaattt gctataccga
    11281 tagctcctct ggctgtcatt gttaagataa aatgttgagc ttgtcttaaa tctagattta
    11341 tactgccagt tgcaccaaga tttttaattc ctccaccata atctacatac cattttctag
    11401 ttaagtgatt atcattagtt ggattggttg gagcaattag tacttgatta aaaatatttg
    11461 caccgttaaa tacattatct tcatttaaat ttgctttttt gtttaaagca gtatctacat
    11521 aagctttgtt tgttagatga ttatcattag ttggatttgc acttactaag ataggtttga
    11581 caaaagtttt actacctact atctcttcat tttctgaatt acttacttta tcacttaagc
    11641 caaaatctat cttgtttatc tcattttcta atttatcatc taattttgct acttcttcat
    11701 ctagcattct tttagtaacc aagcttttat cttcttgtat ttgttctagc tcatcttgct
    11761 tgttttctaa atcttcttgc cgctttgtga tttcttgctc taattcttct ttcttgctta
    11821 tcaaatcact tgttaattct tgctcgattt gtgtaatttc ttgttctagt tcatcttttt
    11881 gcttttcaag ttcgcttgta tcttcaggcg gttctttaac taaagcttca tcgatttgct
    11941 ttttaagctc ttctaattct tcttttttat tttgtaaaat ttcatcattt cttaaagttt
    12001 cttcgatttg atttttaata ttctcaagct cttgcacttt ttgacttaaa tcttgttcta
    12061 aatctttaat atcctctttg gcttgttctt cttcgttttc atcgtttttc attaaagaaa
    12121 aaatatattc aacattagcc ttaattccgc ttatatcata gatttttgct tgattatcaa
    12181 tattatctat gcactcatct tttttaattt caagtacatt aagattttgc tcttttgttt
    12241 catttatttc attaagtcca ctttcttttt taacttcaag ctcatttaaa aaatcttgcg
    12301 tattctcacc taagctatat aatttctcat taaaaagaag gttaaattcg tttttctttt
    12361 cttgataatt agtattaaaa atattattta aattatctat cattattttt gaagtatcta
    12421 caagcgtaat gaattcttgt tttttattat caaaaataaa taaagcttca tttttttcat
    12481 tgcttaaatc atttgatatc tcgttcattg tcgagataat ttcatccctt aaagctttta
    12541 attctgtttc gtaaattaac ttatcgtctc caagttcttt tttagctact tccgccaatc
    12601 tccctaaatt ttcatcagca attaacgctc tttcattaaa tctatcatag ctttgttcaa
    12661 agtgtacttt atatccttcg tattttgcag taagttcatc aaatttagtt aaagcttcat
    12721 ttttaacatc atctaaattt tttaatattt cattttgttt atcatctaaa gaagtgtgga
    12781 tattttcaga ctttgaattt aaatcttgtt ctaaattttc tattttattt ttaaaatctt
    12841 taataatttc agaataagat attacatcat tttcaaattc tttatataaa gctataacgt
    12901 ctcttaaatc ttctatattt tgtttgcttt ctaaaagtaa atcataagca ctagctattt
    12961 ctttatactt gataccaata tcaaatttaa tttcttctaa ttttttaacg ctatttacca
    13021 tctcttgatt taatctttga ttttcaaaaa atatagtatt aattttattt tttataattt
    13081 cacttgcttc acttactact agtttggctt cttttgccaa atctttcact tcttttttaa
    13141 tatttattaa ttcaggtttt atttctttta attcatcaac attcaaatgt aaattatcta
    13201 caatttctaa agcatgattg agttcactta aaatttcatc tttaattttt atatttaaat
    13261 taaagtattc ttctacaaaa tctttatttt gcttaatttc gttgatataa ctatctaaat
    13321 taaattttat ttcttcatat ttgtgtatat ctttttttag attttcaaat tcttctgcat
    13381 tgttttctaa aaaaaattta atgttttgta tttcttgttt atttaaagaa aaa
//
LOCUS       DAPWAA010000042        12944 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.042, whole genome shotgun sequence.
ACCESSION   DAPWAA010000042 DAPWAA010000000
VERSION     DAPWAA010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12944
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.042"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..2055)
                     /locus_tag="RTF91_001191"
     CDS             complement(<1..2055)
                     /locus_tag="RTF91_001191"
                     /inference="COORDINATES: protein
                     motif:HMM:NF017011.1,HMM:NF021616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HDZ4944072.1"
                     /translation="MKILSIIIPFSLSKERPYIQERVLQKIKEFEAFKEEIDFIFVEG
                     YSSVFIDLKKEIENLGYLYIKDAIQQDEGFFSVAKCRNLGARHTKTPCLMFLDVDLKL
                     DLKKLLRLILAKQIDQNPAAFLVLPCVFLNQEASLAFLENHLNEYEILQDLIYGKKEY
                     IHFFMKASSSVVFNTYTFLQLGGYGNFVGFGSEDFDLLARLLKFSAQFEVEAKELTYS
                     SKSWDFEEFKGFRSFFSMLGLEAMFYGLYAFHMWHERPNQNGYLENVAKNHQKFLNNL
                     LKETQEDALILANAKEKICILHSENSYPYNNLQKICVFLGEFMATSEKMFFDEDIFNE
                     QRFLSFIQKHKITRFIFSNPYARVHIQRLYEYMRAKQIPFLCFERGAFPDTWFFDDSG
                     FLADSVNYQEQIWNKALSKEEEQITKTYIDKLLNADQFLENNNQKIQANELRKRLGVR
                     DKKVIFVPLQVVNDTAVRFFTYEPFTYENFLIILDELALKYSKEELVFVCKNHPLNFN
                     IDKTKYKNLIFASNHTNFLSLLELSFACITLNSGVGMYAMILKKPCILCAKAFYAFEN
                     LNLQAHSKEELESHINHILRGNFSFDESKMLRFIKYLKKDYYSYAKSQSKVLKNENSF
                     FRRTTHLYWYQIILGKDKVLKAKFFEKQSYKLNSLHYLPFIYEIKKNRASFDKKTNKV
                     LNY"
     gene            2194..2577
                     /locus_tag="RTF91_001192"
     CDS             2194..2577
                     /locus_tag="RTF91_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDZ4944073.1"
                     /translation="MKVVERINEILKAKNISKRELARRLIDLDMRTSKTGETPTESSI
                     YAYLNGNIELKADMLPFIAEALNIDEQDFFNKHNIKTAHKEQYKKIIELLDYLSPKTL
                     ITLEELLNQNKKKSEELNELIKKML"
     gene            complement(2593..3153)
                     /locus_tag="RTF91_001193"
     CDS             complement(2593..3153)
                     /locus_tag="RTF91_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HDZ4944074.1"
                     /translation="MKYQLRFGGEGGQGVITAGEILAEAAIKEGRSAFKASTYTSQVR
                     GGPTKVDIIIDDKEILFPYAVEGEVDFMLSTADKGYKGFCGGVKENGIIVIEPNLVHP
                     EKSDYEKWQIFEIPIITIAKDEVGNVATQSVVALSIAAYMSKCIELDILKETMLHMVP
                     AKTRDANAKAFDLGIHYASKAKAVHK"
     gene            complement(3150..3995)
                     /locus_tag="RTF91_001194"
     CDS             complement(3150..3995)
                     /locus_tag="RTF91_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HDZ4944075.1"
                     /translation="MAFDYDEHLRVDKLPTQWCWGCGDGVVLKCIIRAIQKIGWNMDD
                     VCLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIG
                     GNHTIHGCRRNIDLTHIVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACEL
                     TKAAGASFVARGNVIEANKLENLIFKALSHKGYSFVDVFSNCHINLGRKNKMGEAVAM
                     LDWIKNRIVDKSKFDQMDTEEKKGKFPTGILHQDETQAEYCHAYEEVRRAAKEKRMVD
                     LGALK"
     gene            complement(3996..5120)
                     /locus_tag="RTF91_001195"
     CDS             complement(3996..5120)
                     /locus_tag="RTF91_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate synthase subunit alpha"
                     /protein_id="HDZ4944076.1"
                     /translation="MREVIATGNVLIAKAAIDCGCKFFGGYPITPSSEIAHELSHMLP
                     ANDGTFIQMEDEISGVSVAIGAAMSGVKSMTASSGPGISLKAEQIGLAFIAEIPLVIV
                     NVMRGGPSTGLPTRVAQGDLFQAKAPTHGDFASIAIAPASLEEAYTETIRAFNLSEKF
                     MTPVFLLMDETVGHMNGKALLPELNEIEIINRKKFTGDKKDYKPYAAGANEAATLNPF
                     FEGYRYHITGLHHGDIGFPTEDGELVKKNIERLIGKIKNRKDEICTWEEFMLDDAEFL
                     IIAYGSVARSVKEAILRLREQGLKIGLFRPITLYPVAEEKIAEVTSRFKKIMVSELNM
                     GQYLEEIQRVSKRDDFISLHRANGRPITPSEIMVKVKENI"
     gene            complement(5129..5440)
                     /locus_tag="RTF91_001196"
     CDS             complement(5129..5440)
                     /locus_tag="RTF91_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDZ4944077.1"
                     /translation="MSMTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLG
                     QMIEVVHPESCIGCTECELHCPDFAIMVAKRDEFKFAKLTAEAKDRAVAVRNNKYKKL
                     A"
     gene            complement(5453..6322)
                     /gene="sucD"
                     /locus_tag="RTF91_001197"
     CDS             complement(5453..6322)
                     /gene="sucD"
                     /locus_tag="RTF91_001197"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDZ4944078.1"
                     /translation="MSILVNKNTKVIVQGFTGKEATFHAEQCMAYGTNIVGGVTPHKG
                     GQTHLGKPVFDTVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPV
                     KDMMFAKQYANKKGMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYE
                     AANQVVQGGYGISTAVGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEA
                     AKFIKENISKPVVAFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDS
                     PALIGEEIQKILG"
     gene            complement(6332..7495)
                     /gene="sucC"
                     /locus_tag="RTF91_001198"
     CDS             complement(6332..7495)
                     /gene="sucC"
                     /locus_tag="RTF91_001198"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDZ4944079.1"
                     /translation="MNIHEYQAKAIFADNGIPTLKGKVAFSIDEAVANAKELGGSIWA
                     VKAQIHAGGRGLGGGVKIAKNLDEVKAYATQILGMNLITHQTGPEGKLVQKLYIESGA
                     NIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHG
                     LEVARVLGLDKDEGKKLISMLAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSF
                     DDSALYRHPEIAELRDITEENPAEREATEFGLSYVKLDGDVACMVNGAGLAMATMDII
                     NYSGAKPANFLDVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILE
                     ATKNVEVNIPIVVRLDGTNAAEAKVILDNSNLKNIKAATNLKNGAELVKSLVG"
     gene            complement(7496..8398)
                     /locus_tag="RTF91_001199"
     CDS             complement(7496..8398)
                     /locus_tag="RTF91_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDZ4944080.1"
                     /translation="MKITVIGAGNVGSSVAYALILREIASEIVLVDINEDLLYAKELE
                     LTQSIAALNLNIDLICTKDYAYTKNSDIVLFSAGFARKDGQSREELLQLNTSIMLDCA
                     KKIKDFTEDPLFIILTNPVDFLLNTLYESRIFSSKKIVAMAGVLDNARFKYELAKKLN
                     VKMSSVDTRLIGFHNDDMVLVKSYASVKNKNIDEILSEEEFDDLENEVKTGGAKVIKH
                     LKTSAYLAPASACVRMIESIRSGEFLPMSVILRGEFGVQNKALGVMVRLGLEGVIEIM
                     KMDLSLQEKDKLEKSLIKYQYKGE"
     gene            complement(8395..10599)
                     /locus_tag="RTF91_001200"
     CDS             complement(8395..10599)
                     /locus_tag="RTF91_001200"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006656184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDZ4944081.1"
                     /translation="MQITYTLTDESPALATYSFLPIVKAFLSRAHIGVKTSDISLSGR
                     ILAIFSEYLKEEQRCEDALELLGELVKRSDANLIKTPNISASIPQLKAAIKELQDKGY
                     MLPNYPDEPKNDEELQIKTKYQKVLGSAVNPVLRQGNSDRRSTKAVKDYAKNNPYRVV
                     EFNPSSKTRVSYMKEGDFFSNEKAILIDQDCIANIEFISINGKSEILKEGLKLEKNEI
                     LDATFMDVQKLEEFYAKEIKASKDDDVLFSLHLKATMMKVSDPILFGYAVKVFFKELF
                     TEFKDEFEKLGINPNNGLSELLSKIENSSKKDEILKKYNEILAKSADISMVNSDKGIT
                     NLHVPSDVIVDASMPAMLKNGARLWDKEGKEKDTNAVIPDQTYATIYEAVIEDLHKNG
                     TLNPAKLGSVSNVGLMAKKAQEYGSHDKTFVAKEEGTFKIVSKGKVLLEHKVKKGDIY
                     RVNQAKFDAVLNWIDLGIERAQLSGAEAIFWLDSKRASNKIMISLVQNRLKEKGKDIA
                     ILAPKEACLRSLELIREGKDAISITGNVLRDYLTDLFPILELGTSAKMLSVVPMLNGG
                     AMFETGAGGSAPKQVEQLVEENHLRWDSLGEFLALQASLEFYANKCSNHKAKILAECL
                     DEAIGEWLENNKAPSRKVKEDDNRTSHFYLAMYFANHLARQASDMELQSFFKDIALEL
                     SSNEEKIRAEFNDAQGVKIDLGGYYKFDDEKTNKIMRPSATFNAILEKIEQR"
     gene            complement(10711..12924)
                     /locus_tag="RTF91_001201"
     CDS             complement(10711..12924)
                     /locus_tag="RTF91_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002924925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal domain-containing protein"
                     /protein_id="HDZ4944082.1"
                     /translation="MDNDLLFLKLTLQRQNKELIADIKKLLLKDYNLNIDGNLSINTK
                     SEFYYFQGRASGELLDFNASISYKNKNLAYKIEDLNIRNITEIFKRVNKRIELPQSLN
                     LWVAYRAKGEFYHLDYLQGFIDFAKDNYYLDNISALGYVDNVKVRLDDKMNAIEIPKL
                     DFNLNKQKLDFIFNKASYNGADLSSSKVYLYDLFDEKKAGIYLRIKSDNLKFDKKLAK
                     ALEGYYFSLPFYQTSGKLKSDLEFKIDFHDKGKISYNGVLALENASISLADFNFTKAF
                     VKLNQNDLSIENASVKNGFLEADFNAKFDLQKQQGNFNTQISRLYFDNGELLDLRNQS
                     VDVNLDYSQNVNISIPQWNLILNFKDGLEANLNNPKILFSFSPLLKKFGFIDAKNVYY
                     KTSNFEDFNASVNDAYFKNNLLVNGQTPFEKDSFNIIKNKGVMEIHTQSNIVSVKISS
                     DNKEIHLKDLSYVYKKDSNSSNNSVFDISTNTQNISFGGVNVALILADSNKTLAFDRV
                     EADLKGDALNLKGSRRNVKFDLYYSSNDLNLNVSNIDDNYLNEFLQKQAVQDGVFNLN
                     IRGSGLEYFDGQIDFKNTYVKDLKGINQLISFIDTVPSLLMFKSPTFNQKGLSLHDGK
                     IIFNRKKDLLSVSAINLNGDSVDIYGLGSVNLRLNTVDFNLELKTLKSASEAISKVPI
                     LNYVVLGKNQEISTNLKIDGSIDDPKFHTEILTDTLKTPFNLIKNIIQLPTNLLN"
BASE COUNT         4292 a         2482 c         1575 g         4595 t
ORIGIN      
        1 ataatttaaa actttgttgg tttttttatc aaaagaagct ctgtttttct tgatctcata
       61 aataaaaggc aggtagtgta aagaatttaa tttatagctt tgcttttcaa aaaactttgc
      121 ttttaagact ttatctttgc ctaagataat ttgataccaa tacaaatgag ttgtccttct
      181 aaaaaaagaa ttttcatttt tcagtacttt actttgagat ttagcataag aataataatc
      241 ttttttaagg tatttaataa aacgtagcat cttgctttca tcaaaagaaa aatttcctct
      301 taaaatatga ttgatatgac tttcaagctc ctctttagaa tgtgcttgta aatttaaatt
      361 ttcaaaggca taaaaagctt tagcacaaag tatgcaaggc ttttttaaga tcattgcata
      421 cattcctact ccgctattta aagttataca ggcaaaactt aattctaaca aacttaaaaa
      481 attcgtatga ttggatgcaa aaataagatt tttatatttt gttttgtcta tattaaagtt
      541 taaagggtga tttttacaga caaaaacaag ttcttcttta gagtatttta aagcaagttc
      601 atctaaaata atcaagaaat tctcataggt aaaaggttca taagtaaaaa atcttacagc
      661 cgtatcattt acaacttgca aaggcacaaa aataactttt ttatctctta caccaagtct
      721 ttttctaagc tcatttgctt gaattttttg attattattt tctaaaaatt gatcagcatt
      781 taaaagctta tcaatgtaag ttttagttat ttgctcttct tccttgctta aagctttatt
      841 ccaaatttgt tcttgataat tgactgaatc agccaaaaat ccactatcat caaaaaacca
      901 agtatcagga aaagctcctc tttcaaagca caaaaaagga atttgctttg ctctcatata
      961 ctcataaagc ctttgaatat gcactctagc ataaggattt gaaaagataa aacgtgtgat
     1021 tttatgtttt tgtataaaag aaagaaatct ttgctcatta aaaatatcct catcaaaaaa
     1081 catcttctca ctagtagcca taaattcacc caaaaacacg caaatttttt gaagattgtt
     1141 ataaggataa gaattttcag aatgtaaaat gcaaattttt tccttagcat tagctagtat
     1201 aagtgcatct tcttgcgttt cttttaaaag gttgtttaaa aatttttgat gatttttagc
     1261 aacattctca agatagccat tttgattagg tctttcatgc cacatatgaa aagcataaag
     1321 cccataaaac attgcctcaa gtccaagcat tgaaaagaaa gatctaaagc ctttaaattc
     1381 ctcaaaatcc caagattttg aggaataagt aagctcttta gcctccactt caaactgggc
     1441 tgaaaatttt aacaatcttg ctaataaatc aaaatcttcg ctcccaaaac ctacaaaatt
     1501 cccgtagcct cctaattgca aaaaagtgta ggtattaaaa acgacactag aacttgcttt
     1561 cataaaaaaa tgaatgtatt cttttttacc ataaataaga tcttgtaaaa tttcatactc
     1621 gtttaaatga ttttctaaaa aagccaaact tgcttcttga tttaaaaaaa cacaaggcaa
     1681 aaccaaaaaa gcagcagggt tttgatcaat ttgctttgct aaaataagcc ttaaaagctt
     1741 ttttaaatct agctttaaat ccacatctaa aaacatcaaa caaggagttt ttgtatgtct
     1801 tgctcctaaa tttctgcatt ttgctacaga aaaaaatcct tcatcttgct gaatagcatc
     1861 cttgatgtaa aggtatccca aattttcaat ctctttttta agatctataa aaacagaaga
     1921 ataaccttcc acaaaaataa aatcaatctc ctccttaaaa gcttcaaatt ccttaatctt
     1981 ctgcaaaact ctttcttgta tatagggtct ttctttactc aaactaaaag ggataataat
     2041 acttaaaatt ttcataaatt ctcataactt tatatatttt ataaaaaatt ataactaatc
     2101 tataattaat tatagattaa atcaaataaa ttgttttttt acaataacaa taaagcttat
     2161 aatacttatt accatatcaa agaaagagct ataatgaaag tcgtagagag aatcaatgaa
     2221 attttaaaag ccaaaaatat ttctaaaaga gagttagcta gaagattgat tgatcttgat
     2281 atgagaacga gtaaaacagg agaaactccc acagaatcaa gtatatatgc ttatttaaat
     2341 ggcaatatcg agttaaaagc ggatatgttg cctttcattg ctgaagcttt aaacattgat
     2401 gaacaagatt tttttaacaa acacaatata aaaaccgctc acaaagaaca atataaaaaa
     2461 atcatagaat tacttgatta tctttctcct aaaactctta tcacgcttga agagctttta
     2521 aatcaaaata aaaagaaaag cgaagaatta aatgagctta ttaaaaaaat gttataagcg
     2581 gaatttatcc gcttatttat gcacggcttt tgccttgctt gcataatgaa ttcctaaatc
     2641 aaaagcctta gcatttgcat ctcttgtttt agctggaacc atatgaagca tagtttcttt
     2701 taaaatatca agctctatac atttgctcat ataagctgcg atagataaag caactacgga
     2761 ctgcgtagca acatttccta cctcatcttt agctatagta ataataggaa tttcaaaaat
     2821 ttgccatttt tcataatcgc ttttttcagg atgtactaaa tttggctcaa tcacaataat
     2881 accattttct tttacaccac cacaaaaacc tttataaccc ttatccgcgg ttgaaagcat
     2941 aaaatccact tcaccttcta cagcatatgg aaataaaatt tctttatcat caatgataat
     3001 atcaaccttg gtagggcctc cacgcacttg tgaagtataa gtagaagctt taaaagcaga
     3061 tcttccttct ttaatggctg cttcggctag aatttctcct gcggtaataa caccttgtcc
     3121 accttcaccg ccaaatctta attgatattt cattttaaag ctcctaaatc caccattctt
     3181 ttttctttag ccgcacgacg cacttcttca taagcgtggc agtattctgc ttgagtttca
     3241 tcttgatgta aaatgcctgt tgggaattta cctttttttt cttcagtatc catttgatcg
     3301 aattttgatt tatctacaat acgattttta atccaatcaa gcatagccac cgcttcgccc
     3361 attttatttt tgcgtccaag attaatatgg caatttgaaa aaacatcaac aaagctataa
     3421 cccttgtgag ataaagcttt aaaaataaga ttttcaagct tatttgcttc tattacatta
     3481 cctcttgcca caaaagacgc acccgctgct ttagtaagtt cacaagcatc aaaatttgga
     3541 tcgatattgc caaattgtgc tgtaactgta taaaagcctt ttggagtagt tggagaggtt
     3601 tgagaattgg ttagtccata aatgaaatta ttaatcacta tgtgcgtaag atcgatattt
     3661 cttctacatc cgtgaatagt atgatttccg ccaattgcca atgtatcacc atctccacta
     3721 actacaataa catgtttgct aggatttgca agtttaatac ctgtagcata agcaatagcc
     3781 cttccatgtg tagtatgtac ggtattgcaa tttacataag aactcattct accactacaa
     3841 ccaataccag aaactaagca tacatcatcc atattccaac cgattttttg aatagctctg
     3901 ataatacact ttaaaaccac accatcacca caaccccagc accattgcgt tggaagctta
     3961 tctactctta aatgttcatc ataatcaaaa gccatttata tattctcctt tactttaacc
     4021 ataatttcac taggggtaat aggacgtcca ttggctctat gtaatgaaat gaaatcatct
     4081 cttttactta ccctttgaat ttcttctaaa tattgcccca tattgagttc gcttaccatt
     4141 atttttttaa agcggcttgt aacttcggca atcttttctt ctgccacagg ataaagcgta
     4201 ataggacgga aaagccctat ttttaagccc tgctctctaa gtcttaaaat cgcttctttt
     4261 acagatcttg ccacgctgcc ataagcaatg attaaaaatt cagcatcatc aagcataaat
     4321 tcttcccaag tacaaatttc atctttgcga tttttaattt tgccgattag tctttctata
     4381 tttttcttga caagttctcc atcttctgtt gggaaaccaa tatctccgtg atgaagtcct
     4441 gtaatatgat aacgataacc ctcaaaaaaa ggatttaaag tagcagcttc attagctcca
     4501 gcagcataag gcttataatc ttttttatcc cctgtaaatt ttttgcggtt aataatctca
     4561 atttcattaa gctctggcaa aagagctttt ccgttcatat gtccaacggt ctcatccata
     4621 agcaaaaaca caggagtcat aaatttttca gacaaattaa atgctctgat ggtttctgta
     4681 taagcttctt caagactcgc tggtgctatg gctatacttg caaaatctcc atgagtaggt
     4741 gctttagctt gaaataaatc cccttgagct acccttgttg gaaggcctgt tgatggacca
     4801 ccacgcatta cattgacgat aaccaaagga atttcagcaa taaaagcaag tcctatttgc
     4861 tctgccttta aagaaattcc tggaccacta cttgctgtca tggattttac tccactcata
     4921 gccgcaccaa tagccacgct tacacctgaa atttcatctt ccatttgtat aaaagttcca
     4981 tcatttgcag gaagcatatg acttaattca tgggctatct cactactagg agtaatagga
     5041 taacctccaa aaaatttaca tccacaatca attgctgctt tagcgattaa aacattacct
     5101 gttgctataa cttctctcat tgttcttcct atgctaattt tttatattta ttatttctca
     5161 cagccacagc tctatcttta gcctcagcag tgagtttagc aaatttaaat tcatctcttt
     5221 ttgccaccat aatagcaaag tcagggcaat gtaattcgca ttcagtacaa cctatacagg
     5281 attcaggatg taccacctct atcatttgtc ctaaaaccgc atgcacatca tcacgcatag
     5341 ctaaaacccc agcagggcaa tagctaacac aaatattgca tgctttacat ctatgctcat
     5401 ctacccaaac aggggtatct tttggagctg tcatactcat atttttcctt tatcaaccta
     5461 atattttttg aatttcttca ccaattaaag ccggagaatc cactacatga attccataac
     5521 ttttcaaagc ttctttttta gctgcagcac tttcatcagc acttcctact atagcacctg
     5581 catgccccat tcttttacct tttggagcgg ttgcacctgc aatgaatgct accacaggtt
     5641 tgctaatatt ttctttaata aacttagccg cttctacttc taaactacca ccaatttcac
     5701 ctatcattac aatagcttta gtttcatcat ctttttgaaa ttcacttaaa agttctttat
     5761 aagcaagccc tataatagga tcaccaccaa ttcctactgc agtagaaatt ccatagccgc
     5821 cttgaactac ctgattagcc gcttcataag ttaaagttcc actttttgaa ataagcccta
     5881 cacaaccttt tttaaaaata aaacccggca taatacctaa tttacattct tcagaagtta
     5941 taatccctgg acaatttggc cctatgattt tcatgccttt tttattagca tattgcttag
     6001 caaacatcat atcttttaca ggagtatgct cagtaatcac aactgcaagc ttaatacctg
     6061 catcagccgc ttcaatcaca ctatcaccca cagcaaaagc aggaacaaaa atcaagctca
     6121 catcagcttt tgttgcttta accgcatctg caacggtatc aaaaaccggt ttgcctaaat
     6181 gagtttgtcc gcctttatga ggagtcacac ctccgactat atttgtacca taagccatac
     6241 attgctcagc gtgaaaagtt gcttctttac ctgtaaaacc ttgaactatt acttttgtat
     6301 ttttattaac caatatactc attttctatc cttatcctac taaacttttt acaagctctg
     6361 caccgttttt aagattggtt gctgctttga tatttttaag atttgaatta tctaaaatta
     6421 cctttgcttc tgctgcatta gtaccatcaa gacgcactac aattggaata tttacctcaa
     6481 catttttagt ggcttctaaa attccatttg ctatcctatc acaacgaaca ataccaccaa
     6541 agatattaat aaatataact tttacatttt tatctcttaa aatgatttca aaagcctttg
     6601 caacggtttc aggcgaagct cccccaccca catctaagaa atttgcaggt tttgcaccgc
     6661 tgtaattaat aatatccata gttgccatcg ctaaacctgc accatttacc atgcaagcca
     6721 catctccatc taatttcaca taacttaaac caaattcagt tgcttctctt tcagcaggat
     6781 tttcttcagt aatatctcta agttcagcaa tttcaggatg gcgataaagc gcgctatcat
     6841 caaaactaca ctttgcatca agagcataaa agtctccttc tgcagtttta atcaaaggat
     6901 tgatttcaag catattcata tctttatcca tataaagctt gtaaagttta gctaacatgg
     6961 aaataagttt tttgccctca tctttatcaa gccctaaaac tcttgctacc tcaagtccat
     7021 gaaacatttt aaaaccaatt tgtggatcta tacctacttt tgcgattttc tcaggacttt
     7081 cttttgccac tttttctata tccatccccc cttcgcttga agcgataatg gtaatttgct
     7141 ctgccattct attaaataaa atagccaaat aatattcttt tactatattt gcaccgcttt
     7201 ctatataaag tttttgcacg agcttgcctt caggtcctgt ttgatgagta attaaattca
     7261 ttcctaaaat ttgagttgca taagctttga cctcatctaa gtttttagcg attttaacac
     7321 caccaccaag accacgacct cctgcgtgaa tttgagcttt aaccgcccaa atgctaccac
     7381 ctaattcttt agcatttgct acagcttcat ctatgctaaa tgcgaccttt ccctttaaag
     7441 tagggatacc attgtctgca aaaattgctt ttgcttgata ctcatgtata ttcatttatt
     7501 ctcctttgta ttgatatttg attaaagatt tttccagttt gtctttttct tgtaaactaa
     7561 gatccatttt catgatctca atcacacctt caagtcctaa tcttaccata actcctaagg
     7621 ctttattttg cactccaaat tctccacgca aaatcacact cataggcaaa aactcgccac
     7681 ttcttataga ctcaatcatt cttacgcaag cgctagcagg ggctaaataa gccgaagttt
     7741 taagatgttt tattaccttg gctccacctg ttttaacttc attttctaaa tcatcaaatt
     7801 cttcttcact tagaatttca tctatgtttt tatttttaac actcgcataa gattttacta
     7861 aaaccatatc atcattatga aagccaataa gtcttgtatc tacacttgac attttgacat
     7921 taagtttttt agcaagctcg tatttaaatc ttgcattatc caaaacccct gccatggcta
     7981 caattttctt tgatgaaaaa atcctgcttt cgtaaagagt attgagtaaa aaatccacag
     8041 gattagtcaa aataataaaa agagggtctt ctgtaaaatc tttgattttt ttagcacaat
     8101 caagcatgat acttgtattt aattgaagta attcctccct gctttgccca tcttttctag
     8161 caaaacctgc actaaaaagc actatatctg aatttttagt ataagcataa tctttagtac
     8221 aaatcaaatc tatattcaag tttaaagcag ctatactttg agtaagttct aattcttttg
     8281 cataaagtaa atcttcattg atatctacta aaacaatttc acttgctatt tctcttaaaa
     8341 tcaaagcata agctacactt gagcctacat taccagcccc tataacagtg attttcatct
     8401 ttgttctatt ttttctaaaa tagcattaaa agttgcactt ggacgcataa ttttatttgt
     8461 tttttcatca tcaaatttat aatatccacc taaatctatt ttcacacctt gagcatcatt
     8521 aaattcggct ctaatttttt cttcgttaga agaaagctct aaagcaatat ctttaaaaaa
     8581 gctttgaagt tccatatcac tagcttgtct tgctaaatga tttgcaaaat acatggctaa
     8641 ataaaaatgg cttgtcctat tatcatcttc tttaactttt cttgatgggg ctttattatt
     8701 ttcaagccat tctcctatag cttcatcaag acattctgct aaaattttag ctttatgatt
     8761 actgcattta tttgcataaa attccaaact tgcttgtaaa gccaaaaact cacccaaact
     8821 atcccaacgc aaatgatttt cttcaactaa ttgttctact tgtttaggtg ctgaaccgcc
     8881 tgctcctgtt tcaaacattg ctccgccatt tagcataggt acaacagaaa gcatttttgc
     8941 acttgttcca agttctaaaa taggaaaaag atcagttaaa taatctctta aaacatttcc
     9001 tgtaatagaa atagcatctt ttccttcacg gataagttct aaacttctta aacaagcttc
     9061 ttttggagct aaaatggcta tatctttacc cttttctttt aaacgatttt gcactaaaga
     9121 tatcataatt ttattgctag ctcttttgct atctaaccaa aaaatagctt cagccccact
     9181 aagctgtgct ctttctatac ccaaatcaat ccaatttaac accgcatcaa atttagcttg
     9241 attaacccta taaatatcgc cttttttaac cttatgttct aataaaactt tgcctttaga
     9301 aacgatttta aaagtcccct cttccttggc tacaaaggtt ttatcgtgcg aaccgtattc
     9361 ttgggctttt ttagccatta agcccacatt agagacacta ccaagttttg caggatttaa
     9421 ggtgccattt ttatgcaaat cttcaataac tgcctcataa atagttgcat aagtttgatc
     9481 aggaattaca gcattcgtat ctttttcttt gccttcttta tcccacaatc ttgcaccatt
     9541 tttaagcatt gcaggcatag aagcatcaac aattacatca cttggaacgt gaagatttgt
     9601 aatacctttg tctgaattta ccatagaaat atctgcggat ttggctaaaa tttcattata
     9661 ttttttcaaa atctcatctt ttttacttga gttttcaatc ttgcttaaaa gctcgcttaa
     9721 gccattgttt gggttaatgc ctaatttttc aaattcatct ttaaattcag taaataattc
     9781 tttaaaaaat acttttaccg catagccaaa aagtatagga tcgcttactt tcatcatcgt
     9841 agcttttaaa tgcaatgaaa aaagcacatc atcatctttg cttgctttaa tttctttagc
     9901 ataaaattcc tcaagttttt gtacatccat aaaagtagcg tctaaaattt catttttttc
     9961 aagttttaaa ccctctttta aaatttcact cttaccattg atacttataa attctatatt
    10021 agctatacaa tcttgatcga ttaaaatcgc tttttcatta gagaaaaaat ccccctcttt
    10081 catataagaa acacgagttt ttgagctagg attaaactca accacacggt aaggattgtt
    10141 ttttgcgtaa tctttcaccg cttttgttga acgacgatct gaatttcctt gtcttaatac
    10201 aggattaact gccgaaccta aaactttttg atattttgtt ttaatttgta attcttcatc
    10261 attttttggc tcatctgggt aatttggtaa catataaccc ttatcttgta attctttaat
    10321 tgccgcctta agctgaggaa tagaagctga gatatttgga gttttaataa gatttgcatc
    10381 cgatcttttt acaagttcac ctaaaagctc taaagcatct tcacatcttt gctcttcttt
    10441 taaatactcg ctaaaaatag ctaaaatcct tccagataaa gaaatatctg aggtttttac
    10501 ccctatatgc gccctactta aaaaagcttt tactataggt aaaaatgaat aagtcgcaag
    10561 agctggcgac tcatctgtta aagtataagt aatttgcatt tttagtcctt taatatactt
    10621 aatttttatt tttaagtata ttacaaataa aaaaaaatgc aagagtaagt ttaaagtttg
    10681 ttttagtttt caaacaaact ttaaatattt ttaattaagt aaattagtag gaagttgtat
    10741 gatattttta ataagattaa aaggagtttt taaggtatct gttaaaattt cagtatgaaa
    10801 tttaggatca tctatgcttc catctatttt taagtttgta ctaatttctt gatttttacc
    10861 taaaactaca taatttaaaa ttggcacctt tgatatagct tcagaagctg attttaaagt
    10921 tttaagttct aaattaaaat ccactgtatt taatcttaaa tttactgatc ctaatccata
    10981 tatatctacg ctatcgccat ttaaattaat agctgaaacg cttaaaagat ctttttttct
    11041 attaaaaata atttttccat catgcaaact caaacctttt tgattaaaag ttggagattt
    11101 aaacatcaat aaacttggca cagtatcaat aaaagaaata agctgattta taccttttaa
    11161 atccttcaca taagtatttt taaaatcgat ctgcccatca aaatactcca atccacttcc
    11221 tcttatattt aaattaaata ccccatcttg cacggcttgt ttttgcaaaa actcatttaa
    11281 ataattatca tcaatattgc taacatttaa attcaaatca ttagaagaat agtaaagatc
    11341 aaattttaca ttcctcctag aacctttaag atttaaagca tcacctttta aatcagcctc
    11401 cactctatca aaagccaaag ttttattaga atctgctaaa atcaaagcca catttacccc
    11461 gccaaaacta atattttgag tattggtaga aatatcaaat actgaattat ttgaagaatt
    11521 agaatctttt ttataaacat aacttagatc ttttaaatga atttctttgt tatcagaact
    11581 tattttaacg cttactatat tactttgggt atgaatttcc ataacaccct tgttttttat
    11641 aatattaaaa ctatcctttt caaaaggagt ttgcccatta acaagtaaat tatttttaaa
    11701 ataagcatca ttaacacttg cattaaaatc ttcaaaattt gaagttttat aataaacatt
    11761 tttagcatca ataaacccaa actttttaag caatggagaa aatgaaaata aaattttagg
    11821 attattaaga ttagcctcaa gtccatcttt aaaatttaaa atcaaattcc attgaggaat
    11881 actaatatta acattttgag agtagtctaa atttacatct acactttgat ttcttaaatc
    11941 caaaagctct ccattgtcaa aataaagcct tgaaatctga gtattgaaat ttccttgctg
    12001 tttttgtaaa tcaaatttag cattaaaatc agcttctaaa aacccatttt taacactggc
    12061 attttctata cttaaatcgt tttgatttaa ttttacaaag gcttttgtaa aattaaaatc
    12121 agccaaagaa atactagcat tctccaaagc taaaacacca ttataagaaa ttttaccctt
    12181 atcatgaaaa tcgattttaa actctaaatc acttttaagc tttccgcttg tttgataaaa
    12241 aggtaatgaa aaataataac cctctaaagc tttagcaagt tttttgtcaa attttagatt
    12301 atcagacttg atacgcaaat aaattccagc ttttttttca tcgaataaat catataaata
    12361 aaccttacta gaacttaaat cagcaccatt ataagaagct ttattaaaaa taaaatcaag
    12421 cttttgtttg tttaaattga aatcaagctt tggaatttca atagcattca tcttatcatc
    12481 taaacgaact ttgacattat cgacataacc taatgcacta atattgtcta aataataatt
    12541 atctttagca aaatctataa agccttgcaa ataatctagg tgataaaatt cccctttagc
    12601 tctatacgct acccaaagat ttaaactctg cggaagctct attcttttat taactctttt
    12661 aaaaatttct gtaatatttc taatatttag atcttctatt ttataagcta aatttttatt
    12721 tttataagaa atacttgcgt taaaatcaag taattctcca cttgctctgc cttgaaaata
    12781 ataaaactcg ctcttggtat taatacttaa atttccatca atatttaaat tataatcttt
    12841 taataaaagt tttttaatat cggctataag ttctttattt tgacgctgta atgttaattt
    12901 taaaaataat aaatcattat ctataaaaaa ttcattattt ttaa
//
LOCUS       DAPWAA010000043        12694 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.043, whole genome shotgun sequence.
ACCESSION   DAPWAA010000043 DAPWAA010000000
VERSION     DAPWAA010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12694
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.043"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..304
                     /locus_tag="RTF91_001202"
     CDS             <1..304
                     /locus_tag="RTF91_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDZ4944083.1"
                     /translation="NKNFIKLSAQKDIALLKQELQNYLNSFDSEGIMVSSLDLINACK
                     ISSEAIFRAKGLLKENSLELFAFEFNLAINELARFTKDFQRDEILDEIFGNFCLGK"
     gene            315..2501
                     /gene="purL"
                     /locus_tag="RTF91_001203"
     CDS             315..2501
                     /gene="purL"
                     /locus_tag="RTF91_001203"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HDZ4944084.1"
                     /translation="MDKETIKAHKISDEEYTQILEILGREPNLLELGVISAMWSEHCS
                     YKSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMAAVFKVESHNHPSFIEPFAGAAT
                     GVGGILRDVFTMGARVVAGLNSLKFGNIHDEKYGKHQKYLVKGVVNGISHYGNCMGVP
                     TIGGECAFDECFNGNILVNAFALGVCKSEDIFYAKAEGIGNPVIYVGSKTGRDGLGGA
                     VMASDSFNEESKSLRPTVQIGDPFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSF
                     EMAGRSGSGMKLYLDKTPMRESGMTPYELMLSESQERMLICARKGYENKVIEIFKKWD
                     LDAVVMGEVTDTGKMELFWHDELVGLIPIEPLSEKAPILSRPISEPRYLSEIKNYKFE
                     LKLSIQELFIQMLQNENINNKAFIYDQFDSSVQTNTIKADGKLGASAIRIKENGASVA
                     IAIECNSRLNYVNPKIGATLAVAAAGRKVACTGAKPLAISDCLNYGNPQNPEVMWQFA
                     QGCEGIKEACKELNTPVVSGNVSLYNETEGVSIYPSPTIVSVGVLEDANKTLKASFEK
                     ENLSIYLLGESLGEFSGSMAMKIQDKKVSGTLKELDYKAELALWNLLYKANQNSLLEC
                     ANSVGIGGIAMTLAKMFAISSVGANLKSGFDDEKMIFDESASRAIVGLSKENEEAFLT
                     LVKEFRLKAYKLGASTSEKHFKLDSIELSKAELDKLYFESFKGQIQ"
     gene            2498..3268
                     /locus_tag="RTF91_001204"
     CDS             2498..3268
                     /locus_tag="RTF91_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family molecular chaperone"
                     /protein_id="HDZ4944085.1"
                     /translation="MTLVLIILVILVFYWYYKTWGKQDFLNSATRGAKGFAKSFSRGV
                     MEERIDEFKRRMNYYVIVLLAKIAKSDGRVSENEAEMIKDLLDANAKDEKERAFLKAS
                     FNEHKENLSDAFYVAKDFLKEVPLPKNERFNVLRVLVFMALIDADFNAKKREILEQIA
                     KAFDIAKSELDAFIASLSNLKSTKKELSLDEAFAILELPNNADLNAVKKQYRNLAKKY
                     HPDILNANNVSEEEIKIGVEKFQKINEAYEKIKKHLER"
     gene            3271..4803
                     /gene="purH"
                     /locus_tag="RTF91_001205"
     CDS             3271..4803
                     /gene="purH"
                     /locus_tag="RTF91_001205"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDZ4944086.1"
                     /translation="MRALLSVSDKEGIVEFSKELENLGFEILSTGGTFKLLKDNGVKV
                     VEVSEFTKSPELFEGRVKTLHPKIHGGILYKRSDENHIKQAKDNEILGINLVCVNLYP
                     FKKTTIMSDDFDKIIENIDIGGPAMIRSAAKNYKDVMVLCDPLDYEKVIETLKNGQND
                     EKFRLNLMIKAYEHTANYDAYIANYMNECFNDGFGASKFIVGQKVFDTKYGENPHQKG
                     ALYEFDAFFSTNFKALKGEASFNNLTDINAALNLASSFDKAPAVCIVKHGNPCGFAIK
                     EDLIQSYIHALKCDSVSAYGGVVAINGTLDETLANKINEIYIEVIIAANVDEKALAVF
                     EDKKRIKIFTQESPYLIRSFDRYDFKHIDGGFVYQNSDEVGENEFKNVKLMTQREASE
                     EELKDLEISMKIAALTKSNNVVYVKKGAMVAIGMGMTSRIDASKAAIAKAKEMGLDLQ
                     GCVLASEAFFPFRDSIDEASKVGVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRHF
                     LH"
     gene            4901..6493
                     /locus_tag="RTF91_001206"
     CDS             4901..6493
                     /locus_tag="RTF91_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDZ4944087.1"
                     /translation="MFKTIGFKVSTAILVVLFISFIIMQVILNLDFKNTANKMSRANL
                     DTVSTSVFQTMRMAMNLGDPEKIKEAIEDAKNIEGISDIKIYPSKNTIELFEMKNPQI
                     SNDNRIIEQFSNPKIQTVEKNVNGVAHLRLIRPLVADESCVACHANVNVGNVIGVMDI
                     SHSLESVQKDISKTSQSYIIIFTIALIFTLCVVLLMLKVVVGKPVLELLNHAKELAQG
                     SGNLKARISVKGQDEIALACRYINQFIEKTHKAVSGASYNSKNVEKQSNLLNLNAISL
                     SEISSQSHKQIDQSFKLGVNVGNELGEFAILSNKANSANEKSFLLLEQMLKSLFNVAN
                     KVSTVSQNENELAKKVENMVNQAANIQKATQMMDEIADKTNLLSLNAGIEAARAGEFG
                     RGFSVIAEDVRRLAQSSEEFLGNVAQITKELLQSINEVSAELKKNAQSVQALNDDTAL
                     LVNDANEVKLCNEDARTLVTQCTEKIKISQENIQNLLSHMQENVEVSEKNEEISKILL
                     QVADELKIVCHNLESELNQFQI"
     gene            6503..6937
                     /locus_tag="RTF91_001207"
     CDS             6503..6937
                     /locus_tag="RTF91_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HDZ4944088.1"
                     /translation="MKKTLQIALAATFFAGCAGTSITSPDSKDNNELVQNQLFKIEKI
                     IVNGKIFDPKNAEESPNISFENNKFYGYAGCNRFFGSYQTKANTLQIEGDRIASTKML
                     CHPLDVMDFENSFLSNFKGTFKISNENGKLVLSNDEMKIFFK"
     gene            7036..8013
                     /locus_tag="RTF91_001208"
     CDS             7036..8013
                     /locus_tag="RTF91_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agamatine deiminase"
                     /protein_id="HDZ4944089.1"
                     /translation="MIKSIPEWSEQEYLMLSLPHEKSDWKPYLDEILQSYKEFIKAVS
                     EFQKVLLIAPSESDFEKFKDIKNVEYFKCDTNDTWIRDFGAIDILENGYLKALDFTFN
                     AWGNKFQSELDNAVNSKLFKEKFQEELKKIDFILEGGSIDFNGDDVMLTSSHCLLNEN
                     RNSHLDKAQIDVKLKEIFGLKQIIWLENGFIKGDDTDHHIDTLARFIDKNTIAHCICE
                     DEEDEHYLPLQKMKEELEKTGFDLLELSIPKPLYYEGRRLGATYANFVFVNNALIVPF
                     YKDKNDEIIAKKLSKALPNRKIIGVDARVFLRQNGSLHCSCQNRFKGLR"
     gene            8010..8897
                     /locus_tag="RTF91_001209"
     CDS             8010..8897
                     /locus_tag="RTF91_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDZ4944090.1"
                     /translation="MSLQKKATLVASLCAIVLALIKFIVGLTSGSVAVLSSAIDSLMD
                     FAISAFNFLALKKSSQKANENYNFGFSKIEALMGLLEGVFIVGVGVFIFYESILKIYY
                     KEEIKDLNSSIYVMIFALIITFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTL
                     GALVLVYFTNLHIIDAIFGIVISLYTAFSAFRIIKKALAFLMDEALPKEQVDKICALI
                     SNNPEVISYHELKTRKTPNCNYLSVHLVFCPIISLLNAHKISDEIEEGVRKMFEAEKW
                     DIQIHLDPYDDAEQERQRQ"
     gene            8894..9766
                     /locus_tag="RTF91_001210"
     CDS             8894..9766
                     /locus_tag="RTF91_001210"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidohydrolase"
                     /protein_id="HDZ4944091.1"
                     /translation="MKIALIQQKFHSNKEQTMKKTCEFIKKASEKGAELVCLGELHQS
                     EYFCQSENVDFFDYANDYEKDVKFWASIAKKNQIVLITSLFEKRSAGLYHNTAVVFEK
                     DGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARI
                     MALKGAQILIYPTAIGWFDKDKDEEKQKQLNAWLGVQKGHAIANGLHVVAINRVGFEK
                     DASGVEEGIRFWGNSFVFGPQGEELCLLDSQNECVKIIEIDKKRSENVRRWWPFLRDR
                     RIEYFTDLTKRFID"
     gene            complement(9778..11124)
                     /locus_tag="RTF91_001211"
     CDS             complement(9778..11124)
                     /locus_tag="RTF91_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDZ4944092.1"
                     /translation="MKSYLYFVFIMLFLTACSTKNLTSLHHENLEQKNEDQHYAKLEY
                     EQSISVLPQFTHNINFNARQYKKYFFNPWHDSFKNYKNQNIFWSFPLYLNSKNTYYFF
                     NKQIIPLSWFKNTIDNANAQELGKLNQKALIIQNTIIKNLPTQRAILKNPFFENEGIP
                     FDYASDGILNAGTPVLISHFSKDRRYAFVLSETGVGFVESKNLEFFSNDRAKIYENLN
                     FITPLKEKFAIYSEDGKFFFESRIGAIYPYYKEDKNYFYGKIGSRKYKISKKDVSKFP
                     LQLNDKNLKNQLSQVLNLPYGWGGYNFERDCSLLTRDIFSAFGLYLPRNSAAQKNSFN
                     HFDISALSNSQKKDFLNRFGKAYLSLLYLPGHIMLYAGQIANNNIAIHNIWGLRKDAT
                     QRLLISSSVITSLEIGKNEISEDNLLLSKLKEISFINLTEQEKEQIKNYLENVQNQ"
     gene            11173..12516
                     /locus_tag="RTF91_001212"
     CDS             11173..12516
                     /locus_tag="RTF91_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDZ4944093.1"
                     /translation="MLDKLEKNLAYSNVFLSGGAGVGKSFLTNELIKSYRKQKKLVVA
                     LGSSALSAFNIGGVTLHSFFCLGYCDDMIKLSVFDRNQKQKEKLAKLKELLKTIELII
                     IDEISMVSANVFEMIGFRLRNSQFNGKILVVGDFFQLPPVIKEKKETLFSHSYYAFSS
                     FFWQDLNFKHIKLSQPKRTQNIEFYNNLSLIRQGFLDEKILSFFKSLQIDCKDLKNLE
                     DDYTLLCGINKKVNNINQERLNKLKTPLVCFKAQVKKENNGLKDEELDSWVKSLNILE
                     ELNIKIGSRIIFCVNNWDKNYYNGEQGVVEDIFYEEEKAYISIIKNNGVKILLEPYTF
                     FMKELDQVGKDFVINILASVTQFPIKLAYAITIHKSQGMSIEKLVCDIDHIFENGQLY
                     VALSRATNPNTLKIYSVKKINFGFYFANILKIDPSVIDFYKRHDFLDLEMQEQII"
     gene            12526..>12694
                     /locus_tag="RTF91_001213"
     CDS             12526..>12694
                     /locus_tag="RTF91_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944094.1"
                     /translation="MKKIFLSVFLTLSLNAQNLEIDKIRTDLYSKSGENVLKKVEISL
                     EFNGNNLKENEN"
BASE COUNT         4556 a         1447 c         2395 g         4296 t
ORIGIN      
        1 gaataaaaat tttattaaat taagcgctca aaaagatata gctttgttaa agcaagaatt
       61 acaaaactat ttaaattctt ttgatagtga gggcattatg gtgagttctt tagatcttat
      121 taatgcttgc aaaatttcaa gtgaggcgat ttttagagcc aagggacttt taaaagaaaa
      181 ttctttagag ctttttgctt ttgaatttaa tttagcgatc aatgaacttg caagatttac
      241 caaagatttc caaagggatg aaattttaga tgaaatcttt ggtaattttt gtttgggaaa
      301 ataaaaggat aaaaatggat aaagaaacta taaaagcaca taaaatcagt gatgaagaat
      361 atacgcaaat tttagaaatt ttaggccgtg agccaaattt gttagagctt ggcgttattt
      421 ctgcgatgtg gagtgagcat tgctcttata aatccagcaa aaaatatctt aatggttttc
      481 caactaaagc accttgggtg atccaaggtc caggagagaa tgcaggggtt attgatattg
      541 gacaaggtat ggcagcggtt tttaaagtag aaagtcataa tcaccctagt tttatcgaac
      601 cttttgcagg tgcggctaca ggagtagggg gaattttgcg tgatgttttt actatgggtg
      661 caagagtggt tgcggggcta aattctttaa aatttggcaa cattcacgat gaaaaatatg
      721 gcaaacacca aaaatatctt gttaaaggcg ttgtaaatgg aatttctcat tatggaaatt
      781 gcatgggcgt gccaactata ggtggagaat gtgcttttga tgagtgtttt aatggaaaca
      841 ttttagttaa tgcttttgct ttaggggttt gtaaaagtga agatattttt tatgctaagg
      901 ctgaaggcat aggaaatcct gtgatttatg tgggttcaaa aacagggcgt gatggacttg
      961 gtggagcggt tatggcaagc gatagtttta acgaagaaag taaatcttta cgtccaactg
     1021 tgcaaattgg cgatcctttc agtgaaaaac ttcttatgga ggcttgttta gagcttttta
     1081 aaactgatta tattgtgggt attcaagata tgggtgctgc tgggcttact tcaagttctt
     1141 ttgaaatggc aggaagaagt ggtagtggta tgaaacttta tttagataaa acccctatgc
     1201 gtgaaagtgg tatgactcct tatgaattaa tgcttagcga atctcaagaa agaatgctta
     1261 tttgtgctag aaaaggctat gaaaataagg ttatagaaat ttttaaaaaa tgggatttag
     1321 acgctgtggt tatgggcgaa gttaccgata ctggaaaaat ggaacttttt tggcatgatg
     1381 aacttgtagg acttattcct attgaacctt tgagtgaaaa agcaccgatt ttaagtcgtc
     1441 ctataagtga accaaggtat ttaagtgaga ttaaaaacta taaatttgag ttaaaattaa
     1501 gcattcaaga actttttatc caaatgcttc aaaatgaaaa tattaacaac aaggctttta
     1561 tttatgatca gtttgattca agcgtacaaa ccaatactat aaaagctgat ggtaaattgg
     1621 gcgctagtgc tattcgcatc aaagaaaatg gcgcaagcgt agctatagct atagaatgta
     1681 attctcgctt aaattatgtg aatcctaaaa taggagcgac tttagctgta gcggctgcag
     1741 gtagaaaagt tgcttgtaca ggtgctaagc ctttggctat aagtgattgt ttaaattatg
     1801 gaaatccaca aaaccctgaa gtaatgtggc aatttgcaca aggttgtgaa ggtatcaaag
     1861 aagcttgtaa agaattaaat actcctgtag taagtggtaa tgtttcgctt tataatgaaa
     1921 ctgaaggtgt aagcatttat ccaagtccaa ccatagtaag cgtaggggtt ttagaagatg
     1981 caaataaaac tttaaaagcc agtttcgaga aagaaaattt aagcatttat cttttgggag
     2041 aaagtttagg tgaatttagt ggatctatgg caatgaaaat tcaagataaa aaagtatcag
     2101 gcactcttaa agagcttgat tataaagctg aacttgcact ttggaatttg ctttataagg
     2161 caaatcaaaa ttctttactt gagtgtgcta atagcgtagg tataggtggt attgctatga
     2221 ctttagcaaa aatgtttgct atttctagtg tgggtgcaaa tttaaaaagc ggttttgatg
     2281 atgaaaaaat gatctttgat gagagtgcaa gtcgtgctat agtagggctt agcaaagaaa
     2341 atgaagaagc ttttttaact ttagttaagg aatttagatt aaaggcttat aaattaggcg
     2401 ctagcacaag tgaaaaacat tttaaacttg atagtattga gctcagtaaa gctgaacttg
     2461 acaagcttta ttttgaaagt tttaaagggc aaatccaatg actttagttt taattatact
     2521 tgttattttg gtgttttact ggtattataa aacctgggga aagcaggact ttttaaattc
     2581 agccacaaga ggagctaaag gctttgctaa aagcttttct cgtggggtta tggaagaaag
     2641 aatagatgag tttaaaaggc gtatgaatta ttatgttatt gtacttttgg caaaaattgc
     2701 aaaaagtgat ggcagagtaa gtgaaaacga agcagaaatg atcaaagatc ttttagatgc
     2761 taatgccaaa gatgaaaaag aaagagcttt cttaaaggca agttttaatg agcataaaga
     2821 aaatttaagt gatgcttttt atgtggcaaa agatttttta aaagaagtgc ctttacctaa
     2881 aaatgagcgt tttaatgtct tgcgtgtgct tgtttttatg gctttaattg atgcggattt
     2941 taatgctaaa aagcgtgaaa ttttagaaca aattgctaag gcttttgata tagcaaaaag
     3001 tgagttagac gcttttattg caagcctttc taatctaaaa agtacaaaaa aagaattaag
     3061 tcttgatgaa gcttttgcta tcttagaact tccaaacaat gccgatttaa atgcagtaaa
     3121 aaagcaatac cgcaatttag caaaaaaata tcatcctgat attttaaacg caaataatgt
     3181 tagcgaagaa gagattaaaa tcggcgtaga aaaatttcaa aaaatcaacg aagcttatga
     3241 gaaaattaaa aagcatttag aaaggtaaaa atgagagcat tacttagtgt gagtgataaa
     3301 gaaggtatag tagaatttag taaagagctt gaaaatttag gttttgaaat cctttcaaca
     3361 ggggggactt ttaagctttt aaaagataat ggggtaaagg ttgtggaagt tagtgaattt
     3421 actaaaagtc ctgagctttt tgaagggcgt gtaaagactt tgcaccctaa aattcatggt
     3481 ggaattttgt ataaaagaag tgatgaaaac catatcaagc aagctaaaga caatgaaatt
     3541 ttaggtatta atctagtttg tgtgaattta tatcctttta aaaaaactac tatcatgagt
     3601 gatgattttg ataagattat cgaaaatatc gatatagggg gtcctgcgat gataagaagt
     3661 gctgctaaaa attataaaga tgtgatggtg ctttgtgatc ctctagatta tgaaaaagtg
     3721 attgagactt taaaaaatgg tcaaaatgat gaaaaatttc gccttaattt gatgataaaa
     3781 gcttatgagc atacggcaaa ttatgatgct tatattgcaa attatatgaa tgaatgcttt
     3841 aatgatggtt ttggagcaag taagtttatt gtagggcaaa aagtatttga tacaaaatat
     3901 ggagaaaatc cacatcaaaa aggtgctttg tatgaatttg atgccttttt tagcacaaat
     3961 tttaaggctc ttaaaggtga agcaagtttt aacaatctaa ctgatatcaa tgctgcttta
     4021 aatttggcta gtagtttcga taaagctcca gcggtttgta tagtaaaaca tggaaatcct
     4081 tgtggttttg ctataaaaga agatttaatt caaagttata tccatgcttt aaaatgtgat
     4141 agtgtaagtg cttatggagg agtagttgcg ataaatggaa ctcttgatga gactttggca
     4201 aataaaatca atgaaattta tatagaagta atcattgcag caaatgtaga tgaaaaagct
     4261 ttagcagtgt ttgaagataa aaaacgcatt aaaattttca cccaggaaag tccttatttg
     4321 atccgtagtt ttgatagata tgattttaaa catattgatg gaggttttgt atatcaaaat
     4381 agcgatgaag tcggtgaaaa tgagtttaaa aatgtaaaac tcatgactca aagagaagca
     4441 agtgaagaag aattaaaaga tcttgaaatt tctatgaaaa tagcggcact taccaaatca
     4501 aataatgttg tttatgtaaa aaagggtgct atggttgcta taggtatggg catgacaagt
     4561 agaatcgatg catcaaaagc agctattgct aaggctaaag aaatgggact tgacttacaa
     4621 ggttgcgttt tagcaagcga agcctttttt ccatttagag atagtataga tgaggcaagt
     4681 aaagtagggg ttaaagctat agtagaacca gggggaagca taagagatga tgaagtggta
     4741 aaagcagctg atgagtatgg tatggcgctt tattttacag gagtaagaca ttttttgcat
     4801 taaatttaat agaatgttat ttttttacat ataatttaat aaaaattaaa taaattatat
     4861 gtaaaatatt tgtagaaatt tttattttta ggaatctatg atgtttaaaa ctataggatt
     4921 taaggtttct actgcaattc ttgtagtgtt atttataagt tttattataa tgcaggtgat
     4981 tttaaatttg gattttaaaa atactgctaa taaaatgagt agagcgaatt tagatactgt
     5041 aagtacttct gttttccaaa caatgagaat ggctatgaat ttaggagatc ctgaaaaaat
     5101 taaagaagcc attgaagatg caaaaaatat agagggtatt agtgatatta aaatttatcc
     5161 ttcaaaaaat accatagagc tttttgaaat gaaaaatcct caaatttcaa atgataatcg
     5221 tattatagaa caattttcaa atcctaaaat tcaaaccgta gaaaaaaatg taaatggagt
     5281 tgcgcattta agattgatac gccctttggt tgcagatgaa agttgtgtag cttgtcatgc
     5341 aaatgtcaat gtaggtaacg tgattggagt tatggatata tcacattctt tagagagcgt
     5401 tcaaaaagat ataagtaaaa ccagtcaatc ttatattata atatttacca tagctttgat
     5461 ttttaccctt tgtgtggttc ttttgatgct taaagttgtt gttggaaagc ctgttttaga
     5521 acttttaaac cacgctaaag aattagctca aggaagtgga aatttaaaag cacgtatttc
     5581 agttaagggt caagatgaaa ttgctttagc ttgtagatat attaatcaat ttattgaaaa
     5641 aactcataaa gcagttagcg gtgcaagtta taattcaaaa aatgtagaaa aacaaagcaa
     5701 tcttttaaat ttaaatgcta tttccttaag cgaaatcagt tcgcaaagtc ataagcaaat
     5761 agaccaaagt tttaaactcg gtgtaaatgt tggcaatgaa cttggagagt ttgctatttt
     5821 gtcaaataag gcaaatagcg caaatgaaaa atctttttta ttgttagaac aaatgcttaa
     5881 atctttattt aatgttgcta ataaagtatc aacagtgtct caaaatgaaa atgaattggc
     5941 taaaaaagtt gaaaacatgg tcaatcaagc agctaatata caaaaagcaa ctcaaatgat
     6001 ggatgagatt gcagataaaa caaatttatt gtctttaaat gctggtatag aggcagctag
     6061 agcgggtgag tttggacgag gtttttctgt aattgctgag gatgttagac ggttagctca
     6121 aagcagtgaa gaatttttag gaaatgtagc tcaaattaca aaagaacttc tacaaagtat
     6181 taatgaggtt agtgcagagt taaagaaaaa tgcccaaagt gtgcaagctt taaatgatga
     6241 tactgctttg ttggttaatg atgctaatga ggttaaatta tgtaatgaag atgccagaac
     6301 tttagtaacc caatgcactg aaaaaataaa aatttctcaa gaaaatatac aaaatttact
     6361 ttctcacatg caagaaaatg ttgaagtaag tgaaaagaat gaagaaattt ctaaaattct
     6421 acttcaagtt gcagatgagt taaaaatagt gtgtcataat ctcgaaagcg aacttaatca
     6481 atttcaaatt taaaggaata aaatgaaaaa aacgcttcaa attgctttag ctgcaacttt
     6541 ttttgcgggt tgtgctggta cttctattac ttcacctgat tctaaggata ataatgagct
     6601 tgtgcaaaat caacttttta aaatagaaaa aattatagtc aatggtaaaa tttttgaccc
     6661 aaaaaatgca gaagaaagtc caaatattag ctttgagaat aataaatttt atggttatgc
     6721 aggatgtaat cgcttttttg gttcttatca aactaaggca aataccttgc aaattgaagg
     6781 cgatcgtata gcttcaacta aaatgctttg tcatcctttg gatgtgatgg attttgaaaa
     6841 ttcttttctt tcaaacttca aaggaacttt taaaatttca aatgaaaatg gtaaacttgt
     6901 tctaagcaat gatgaaatga aaatcttttt taaataacac tctaaagcct cgaaatatcg
     6961 aggcaatctt cttaaatttg acaaaagtct aaaaaatgat acaattatat ttttattatc
     7021 aaaaaaggca attaaatgat aaaatcaatc cctgaatgga gtgaacaaga atatctcatg
     7081 ctttctttgc cacacgaaaa aagcgattgg aagccatact tggatgaaat tttgcaaagt
     7141 tataaagaat ttataaaagc agtgagtgaa tttcaaaaag ttttacttat agcccctagt
     7201 gaaagtgatt ttgaaaaatt taaagatata aaaaatgtag agtatttcaa atgtgataca
     7261 aatgatactt ggatacgcga ttttggtgct atagatatat tagaaaatgg gtatttaaag
     7321 gcacttgatt ttacctttaa tgcttgggga aataaatttc aaagcgagct tgataatgct
     7381 gtaaattcta agctttttaa agagaaattt caagaagagc ttaaaaagat tgattttatc
     7441 ttggaggggg gaagtattga ttttaatgga gatgatgtga tgcttacaag ttctcattgt
     7501 cttttaaacg aaaacagaaa ttctcatcta gataaagctc aaattgatgt aaaattaaaa
     7561 gaaatttttg gtttaaagca aattatttgg ctagaaaatg gttttataaa aggtgatgat
     7621 acagatcatc atatcgatac tttggcaaga tttatagata aaaatactat agcgcattgt
     7681 atttgcgaag atgaagagga tgagcattat ttgcctttac aaaaaatgaa agaagaactt
     7741 gaaaaaaccg gttttgattt attggagctt tccataccta agcctttata ttatgaagga
     7801 agaaggcttg gcgcgactta tgcgaatttt gtttttgtaa ataatgcttt aattgtgcct
     7861 ttttataaag ataaaaatga tgaaattata gccaaaaaac tttctaaggc tttacctaac
     7921 cgcaaaatta taggagtaga tgcaagagta tttttgcggc aaaatggctc tttgcattgc
     7981 tcttgtcaaa atcgtttcaa aggtttaaga tgagtttgca aaaaaaagca acccttgtgg
     8041 caagtttatg tgctattgtt ttggctttga ttaaatttat agtgggatta acaagtggtt
     8101 ctgttgcagt gctctcaagc gcgattgatt ctttaatgga ttttgctatt tctgctttta
     8161 attttttagc ccttaaaaaa agctcacaaa aggcaaacga aaattataat tttggttttt
     8221 ctaaaatcga agctttaatg ggtttattag aaggcgtttt tatagttgga gtaggcgttt
     8281 ttatttttta tgagagtatt ttaaagattt attataagga agaaattaaa gatttaaact
     8341 caagcattta tgtaatgatt tttgctttaa ttattacttt ttttcttgta ctttttttaa
     8401 attatgtggc taaaaaaacc aaaagtttga ttatagaaag tgatgctttg cactataaaa
     8461 cagattgctt aactaatgct tgtactttgg gagctttggt gttagtttat tttacaaatt
     8521 tacatatcat cgatgctatt tttgggatag ttattagtct ttatacggca ttttctgctt
     8581 ttaggatcat taaaaaagct ttagcttttt taatggacga agctttacct aaagagcaag
     8641 tggataaaat ttgtgctttg atttctaata atcccgaggt aatttcttat catgagttaa
     8701 agacgcgtaa aactccaaat tgtaattatt taagcgtgca tttggttttt tgtcctataa
     8761 tttcgctttt aaatgcacat aaaatttcag atgagataga agagggtgtg cgtaagatgt
     8821 ttgaggctga aaaatgggat atacaaattc atttagatcc ttatgatgat gcagaacaag
     8881 aaaggcaaag acaatgaaaa tcgctttaat acaacaaaaa tttcattcaa ataaagaaca
     8941 aaccatgaaa aaaacttgcg aatttataaa aaaagcttct gaaaaaggag ctgaacttgt
     9001 ttgtttagga gagcttcatc aaagtgaata tttttgtcaa agtgaaaatg tggatttttt
     9061 tgattatgca aatgattatg aaaaagatgt gaaattttgg gcaagtatag ctaaaaaaaa
     9121 tcaaatagtg cttattactt cactatttga aaaacgaagt gctggacttt atcataatac
     9181 tgcggtggtt tttgaaaaag atggttctat agcaggaaag tatcgcaaaa tgcatatacc
     9241 tgatgatcct tgtttttatg aaaaatttta ttttactcct ggagatttag gttttgagcc
     9301 tataaataca agtttaggca agcttggggt gcttatttgc tgggatcagt ggtatcctga
     9361 agcagcaaga atcatggctt taaaaggagc tcaaattctt atttatccta cagcaattgg
     9421 ctggtttgat aaggataaag atgaagaaaa acaaaaacag cttaatgctt ggcttggtgt
     9481 gcaaaaagga catgctatag ctaatggctt gcatgtagta gctattaata gagtgggttt
     9541 tgaaaaagat gcaagtgggg tagaagaggg gataagattt tggggaaatt cttttgtttt
     9601 tggccctcaa ggtgaagagc tttgtctttt agatagtcaa aatgaatgtg taaaaatcat
     9661 agaaatagat aaaaaaagaa gtgaaaatgt acgtcgttgg tggccttttt tacgtgatag
     9721 acgcatagaa tattttacag atttaactaa aagatttatt gattaaagca ataaatctta
     9781 ttggttttgt acgttttcaa gatagttttt tatttgctct ttttcttgtt cagttaaatt
     9841 tataaaactt atttctttaa gttttgataa gagtaaatta tcttctgaaa tttcattttt
     9901 tcctatttct aaagaggtaa taacactaga gcttatgaga agtctttggg ttgcatcttt
     9961 tcttaagccc catatgttat gtatagcgat attattattt gcaatttgac ctgcataaag
    10021 catgatatgt ccaggtaaat aaagtaagct tagataagct tttccaaagc gatttaaaaa
    10081 atcttttttt tgtgaattgc taagagcgct tatatcaaaa tggttaaaag aatttttttg
    10141 tgcagctgaa tttcttggta ggtaaagtcc aaaagctgaa aagatatcac gagtcagtaa
    10201 agaacaatct ctttcaaaat tataaccacc ccaaccatag ggtaaattta aaacttgtga
    10261 aagctgattt tttaaatttt tatcattaag ctgtaaaggg aatttagaga catctttttt
    10321 agaaatttta tattttctag aacctatttt tccataaaaa tagtttttat cttctttgta
    10381 gtaaggataa atagcaccga ttctactttc aaagaaaaat ttaccatcct cgctatagat
    10441 agcaaacttt tcttttagtg gggtgataaa gttaagattt tcatagattt ttgctctatc
    10501 atttgaaaaa aattctaagt ttttgctttc aacaaatcca accccagttt cacttaaaac
    10561 aaaagcatag cgtctatctt tactaaaatg tgaaattaaa acaggggttc cggcatttaa
    10621 aataccatcg cttgcgtagt caaaaggaat tccttcattt tcaaaaaaag gattttttaa
    10681 gatagctctt tgggttggaa gattttttat gattgtattt tggataatta aagctttttg
    10741 attaagtttg cctaattctt gagcgttggc attatctata gtgtttttaa accatgaaag
    10801 tgggataatt tgtttattga aaaaataata agtatttttt gaatttaaat acaaaggaaa
    10861 ggaccaaaaa atattttgat ttttgtagtt tttaaacgaa tcatgccaag gattaaagaa
    10921 atatttttta tattgtcttg cattaaaatt aatattgtgt gtaaattgag gcaaaacgct
    10981 tatgctttgt tcgtattcaa gttttgcata atgttgatct tcattttttt gttctaaatt
    11041 ttcatgatga agtgaagtta aattttttgt tgaacaagct gttaaaaata gcattataaa
    11101 aacaaaatat aaataagatt tcataatcaa ccttttagaa aaaataatta taattaaagc
    11161 taaggaaata taatgcttga taaactagaa aaaaatttag cttatagtaa tgttttttta
    11221 agcggtggtg ctggggttgg taaaagtttt ttaacaaatg aactcattaa atcctataga
    11281 aaacaaaaaa aattagtcgt agctcttggc tctagtgctc tttcagcgtt taatataggt
    11341 ggtgttactt tacatagctt tttttgcttg gggtattgtg atgatatgat aaaattaagt
    11401 gtatttgatc gcaatcaaaa gcaaaaagaa aaattagcaa agcttaaaga gcttttaaaa
    11461 acaattgaac ttattatcat tgatgaaatt tctatggtta gtgcaaatgt ttttgaaatg
    11521 ataggtttta ggcttagaaa ttctcaattt aatggaaaaa ttttagttgt tggggatttt
    11581 tttcagttac ctcctgtgat taaagaaaaa aaagaaactc tgtttagcca ttcttattat
    11641 gctttttcgt catttttttg gcaagattta aattttaaac atattaaact ttctcaacct
    11701 aaaagaacgc aaaatattga attttacaat aacttatctt tgattagaca aggtttttta
    11761 gatgaaaaaa ttttaagttt ttttaaatct ttgcaaattg attgtaagga tttaaaaaat
    11821 ttggaagatg attacacttt gctttgtggt atcaataaaa aagtaaataa catcaatcaa
    11881 gaaagattaa ataagcttaa aaccccgctt gtatgtttta aagctcaagt taaaaaggaa
    11941 aacaatggat taaaagatga agaacttgat tcttgggtta aaagtttaaa tatattagaa
    12001 gaattaaata ttaaaatagg ttctcgtatt attttttgtg taaataattg ggataagaat
    12061 tattataatg gagaacaagg tgttgtagaa gatatttttt atgaagaaga gaaagcttat
    12121 attagcatta ttaaaaacaa tggggtgaaa attttacttg aaccttatac tttttttatg
    12181 aaagagcttg atcaagtagg taaggatttt gttatcaata ttcttgcaag tgttacgcaa
    12241 tttcctatta aattagctta tgctatcact atacataaat cacaaggtat gagtattgaa
    12301 aagttagtgt gtgatattga tcatattttt gaaaatgggc agctttatgt agctctttct
    12361 cgcgctacaa atccaaatac tttaaaaatt tattctgtaa aaaagataaa ttttggattt
    12421 tattttgcta atattttaaa aatagatcct agcgtgatcg acttttataa aagacatgat
    12481 tttttagatc ttgaaatgca agaacaaatt atttaaaggc attaaatgaa aaaaatattt
    12541 ttaagtgttt ttttgacttt gagtttaaat gctcaaaacc ttgaaataga taaaataaga
    12601 acagatttat attctaaaag tggggaaaat gttcttaaaa aagttgaaat ttctttagaa
    12661 tttaatggga ataatttaaa agaaaatgaa aata
//
LOCUS       DAPWAA010000044        12680 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.044, whole genome shotgun sequence.
ACCESSION   DAPWAA010000044 DAPWAA010000000
VERSION     DAPWAA010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12680
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.044"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(94..1071)
                     /locus_tag="RTF91_001214"
     CDS             complement(94..1071)
                     /locus_tag="RTF91_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HDZ4944095.1"
                     /translation="MKYSVIIPVDLDLRPFDILKKVKSILKRSSNEVEIVFGHNDRGS
                     IFDKYLRKICSKKSNVKLVSGKFYTKLICQSLLRNRAVEQCSSEFIYLMDVDYLFDET
                     LNDECIDDIKNAKNPFIILPCLYLSRKGSREVFKFSREEMFEKYISFRKDLFISLASP
                     SGGSIFMKKEDYFAVGGFDEDFIGRGGEDFEFMIKLALYKNVIKPTKDLMLNKFYKAP
                     LLSEGFRKYLTFNGLPYFFEKKVAFHIYHGRNRLRGYFRQYDKNSNILQEKIKLGSNL
                     EDSGESLIEFYEQLCKKYNVSIDTYAILFDAYKPKLFSLERFLLFLRRL"
     gene            complement(1073..2020)
                     /locus_tag="RTF91_001215"
     CDS             complement(1073..2020)
                     /locus_tag="RTF91_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HDZ4944096.1"
                     /translation="MNTLEIAKEVFEKEAQAILDLAKNLDENFNQAVNLMLNTKGRCI
                     VSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEE
                     ILKIIPAIKKRKIPLIVMCGKENSTLVKQGDVFLNIAVEKEACPLQLAPMSSTTATLV
                     MGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVANNLPIVHPDTEFNDL
                     VDVMTSGKLGLCVVLENEKLVGIITDGDLRRALKTNDKPRFDFKAKEIMSTNPKVVDV
                     DAMASEAEEIMLKHKIKEIIVGKEERVVGIIQLYAIGNV"
     gene            complement(2030..3688)
                     /locus_tag="RTF91_001216"
     CDS             complement(2030..3688)
                     /locus_tag="RTF91_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HDZ4944097.1"
                     /translation="MKKILILFFSCILCFGAVDVSQIISAEDQSSTTTSIDQNLSSSY
                     DMENKENNLTKIHQILVFGAHLFNGNFKNYNQRVYNPDYKIAVGDQISLKIWGAVEFS
                     QVLVVDSQGNIFIPKVGAVNLLGVKNSALVSVIKAHVNKIYKNNVFVYADMNAYQNVS
                     VFVTGSVNAPGLYQGLSSDSVIQYLDRAGGINLEYGSFRDIQILRNNSVIKNIDLYDF
                     LLKGQMNLFPFRSGDVILVGNVQNYAFVDGDVQRPFRFELSNDIKTLADLARVSGAKP
                     IVTNAIVKSYGEDHKLDVNAYNKMQFSKVLLKTGDEVEFHPEYISENLTISVNGEHNG
                     LKTLVVGKGTTLEDISKLIKANMQSNMQALQVFRKSVARTQKELINAQLKELETLALT
                     SGSVTAQGAAIRAQQAKTILEFIQRAKQVQPKGQIVIDNPKSYSSVILEDGDTINVPS
                     KNNLIIVQGEVSLPGAFVYDKGKDLRYYINLAGGYGERADTSKVLVIRSNGKAEKYHS
                     GINMKPGDSVLVLPKVDSENLQIFSMLTQILYQIAIATNVVLKL"
     gene            complement(3690..4808)
                     /locus_tag="RTF91_001217"
     CDS             complement(3690..4808)
                     /locus_tag="RTF91_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDZ4944098.1"
                     /translation="MEENKTLLAKIKDLSIFNSFKIVWFIMIFVVIYYVLIAAPRYVS
                     TMILDVRSTSGESTQASGILSLLSSTSTASEDLNYLKGYIESSDMLKILDEKIKLKSL
                     YQEQYIDLPFKIWDSSSMESYLEYYQARVKVHTDETTKLLKVEVEGFTPKSAHLIAQT
                     IMQESEKFINEISHKAAREQMAFAENEVQKYKKRYQKAQNDLIAFQNKYGVFDPLKQA
                     ETKASLVAQIEANLAQKEAKLLTLQSYMNDAAPEVVALKAEIEAIKKQLLREKSKISA
                     NNSSQKLNDLAAKFQDLTIEATFAQKAYEAALKAYESARIEALRKIKQLVIIQSPDIP
                     ESAKYPERIYDILTAFIVLSLIFGIIKFIKMIIEEHKY"
     gene            complement(4808..5470)
                     /locus_tag="RTF91_001218"
     CDS             complement(4808..5470)
                     /locus_tag="RTF91_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4944099.1"
                     /translation="MIKLINLTKSYPLFSGGRHYVFKNFTFEFPENCSIGLMGYNGAG
                     KSTLMRLLSGAELPDSGKIITNKKLSWPLGLNGAFQGSLTARDNAKFVARVYGYKGKE
                     LQEKVKFVEDFAELGKFFDEPMKTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPA
                     FREKSVKLYRERLSKSKVIMVSHNVAEIKEWCDKIIYMKNGQITVYDDIDEGIAVYQG
                     KA"
     gene            complement(5467..6249)
                     /gene="kpsM"
                     /locus_tag="RTF91_001219"
     CDS             complement(5467..6249)
                     /gene="kpsM"
                     /locus_tag="RTF91_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide transporter KpsM"
                     /protein_id="HDZ4944100.1"
                     /translation="MLNVIYALFFRELKTRFGKNRYLGYIWVVGEPMSIIVVVTTIVT
                     IIREYHHQVMPEGISIFMFLISGIMPFFMFRSIVTQLMNGTQANLSLFAYKPVKPIHV
                     FIARTLLEFCIYFVIFITVLFFAGWFFRLDVFPVHLLGVLFCIFLLICSAFALGICFA
                     IVWHFIEPLRTLLGYFSIVFYWTSGIIFPTWLTPRPLLDIFYYNPLLHIMELLRFNFF
                     ENYPLQDEYSYFYPIFWILLVLFIGLFIYYYNRQALTAAKKE"
     gene            complement(6321..6728)
                     /locus_tag="RTF91_001220"
     CDS             complement(6321..6728)
                     /locus_tag="RTF91_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944101.1"
                     /translation="MDERILEFIKNEQLLSWAMIDEKGVYTASAFYAFDEENLAFIIA
                     SHKDTKHITLASKNSSIAINISKESKIAFLKGVQAKAEFKMASKDQMKIYFSKFPFAK
                     LDKSAKIYVLELFWLKFTNNALGFSKKLEFCKK"
     gene            6797..7360
                     /gene="ciaI"
                     /locus_tag="RTF91_001221"
     CDS             6797..7360
                     /gene="ciaI"
                     /locus_tag="RTF91_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular survival protein CiaI"
                     /protein_id="HDZ4944102.1"
                     /translation="MQIDASKNQSFSMDYTTKSGKHLALSMYDNQSISYANNEEGKTL
                     NLKRQYGFSFTFEGSKLTQNDLDEIKNAMKEVEPMIKDFLANSKVKELKPKEIIKSAM
                     QIANVLPTPNDENHQNAIMNNFTNKLNDLLKQNQTNNKDINASMLEDSKKLLGEVLEQ
                     MKKQLEKQQEKAKENQNKADDNLNLYA"
     gene            7397..8083
                     /locus_tag="RTF91_001222"
     CDS             7397..8083
                     /locus_tag="RTF91_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HDZ4944103.1"
                     /translation="MTNIEILENMLKLQQKLNDETNGLNWENGYTKEGKLISWRRCIY
                     MECAELIDSFAWKHWKNISSPTNWENVRIEIVDIWHFILSLLLEEYHNKSRNDFKIIA
                     NEVISVSIFQDFCKEEHPNESDIYGILNDIELIIHKCSGFGFNLGELLSTYFTLAIKC
                     GLNLEILYKTYIGKNVLNIFRQNNGYKDGSYKKTWNGKEDNKVLTQILEQELDFDTIY
                     KKLEECYKKA"
     gene            8085..8798
                     /locus_tag="RTF91_001223"
     CDS             8085..8798
                     /locus_tag="RTF91_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HDZ4944104.1"
                     /translation="MNIVKLAVKDFFTLKFLKFALIPLIFSLLFMLFLGALGFSALLD
                     YFNSLFSVGEDSFWAWFYALHFVQILITIISFLFSGFIVIFASVFLALFITSFLTPFI
                     AKEINQKYYHYDNINEVSTLKTIFEIFKIFIKFIGIFLLCTLALFLPFINIFVYYLAF
                     YYLFHKLLMIDVTSTILDKESFKNFHSDFSPLEFKFSTLCFYLLSSVPLLGLFLQVFF
                     VIFLTHLGYRRILKLEVKA"
     gene            complement(8781..9746)
                     /gene="tilS"
                     /locus_tag="RTF91_001224"
     CDS             complement(8781..9746)
                     /gene="tilS"
                     /locus_tag="RTF91_001224"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDZ4944105.1"
                     /translation="MQIKDEILSLLKRGKNLLAFSYGSDSSALFYLLMQEKIDFDLVM
                     INYKTRKNSDLEELKAKELALKFHKKIFIKYAPKFQSNFEKKARDFRYDFFEKICFEQ
                     DYDHLILAHHLNDQFEWFLMQLSRGSGLAEILGMQECEKRSNYTLLRPLLFISKDEIS
                     SFLKEKDIFHFHDESNENEKYFRNYIRKKFSNAFVSEFHQGLKRSFSYLGEDRKKLYD
                     FENIKEVQGLLICPKNESLIARAVKMKGLLLSTAQRKELLKGDCVLGGKIALVYKNGQ
                     AIVFEYETCQKLPKNFKEECRIAKIPRLLRAYLYNHKIDISSLNL"
     gene            complement(9736..11055)
                     /gene="rimO"
                     /locus_tag="RTF91_001225"
     CDS             complement(9736..11055)
                     /gene="rimO"
                     /locus_tag="RTF91_001225"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDZ4944106.1"
                     /translation="MPKLYLLSLGCNKNLVDSEIMLGRLSAYELCDEPSKADVLIVNT
                     CGFIDSAKKESINAILDLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDY
                     ERIDEMILKKTNLFSNSTYLQSENSKRIITGSNSHAFIKIAEGCNQKCSFCAIPSFKG
                     KLKSREISSIIAELKDLVARGYKDFSFIAQDTSSYLFDKGEKDGLIRLIDEVEKIQGI
                     RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHISDNMLKIMKRGANSTRLKEM
                     LNLMKSAPNSFLRTGFIVGHPGESEADFEELCEFVKDFGFDRVSVFAYSKEEDTAAFD
                     MEQVPFKVINKRLKIIEKIVDEVIEKSFEKEVEQKRLVVCTGESSEGEFFIAAKDLRW
                     DREIDGEILINESECGNLEMGQIYECEILQNLDKKLLAKALRKVDAN"
     gene            11803..>12680
                     /locus_tag="RTF91_001226"
     CDS             11803..>12680
                     /locus_tag="RTF91_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDZ4944107.1"
                     /translation="MSFNKNTFNLNLLGVHLWNDSGICEIQIKNPKDQIFNRSLNYNF
                     SYFFDIYDRQFKFANDTKILNNGVNNINLISFFLASPEGNYHTEKIDFEALANENIEI
                     PKEYNFNHLIPPIELYKEIIDEYCSIMDPIKLAPLQNQIKEKDNIISTLNQEKTTLQN
                     ELSSFPIKKQNLEIKNLEQDLIFKKLQNKKLAKQMGIKLNTIIPKLTMINPNSAKARI
                     HNHLSYKLGQALIENSKSVFGYIRMPFILSYIADKHKLEQKIYKEKIKQNPSFTLPPL
                     ETYPDYNEALKEKECFT"
BASE COUNT         4529 a         2166 c         1530 g         4455 t
ORIGIN      
        1 aaatttagaa aaaaacttaa caagataaat tctaaaaatt ccatctaata caactttaat
       61 aaatttttta ttttcacttg aaaattttag catttataat cttctcaaaa aaagcaaaaa
      121 tcgctctaaa ctaaaaagtt ttggcttata agcatcaaat aaaatagcat atgtatcaat
      181 gcttacatta tattttttac aaagttgttc ataaaattct attaaactct ctccactatc
      241 ttctaagtta gagccaagtt taattttttc ttgcaagata tttgaatttt tatcatactg
      301 cctaaaatat ccacgcagcc tatttctacc atgataaata tgaaaagcaa cttttttttc
      361 aaaaaaataa ggcaaaccat taaaagtaag atattttcta aaaccttcac tcaaaagtgg
      421 tgctttataa aatttattaa gcattaaatc cttagttggc ttgattacat ttttataaag
      481 tgcgagttta atcataaatt cgaagtcttc tccaccacgc cctataaaat cttcatcaaa
      541 accacccacg gcaaaatagt cttctttttt cataaaaata cttccgccgc taggacttgc
      601 aaggctaatg aataaatctt ttctaaaaga aatatacttt tcaaacattt cttctctact
      661 aaatttaaaa acctcccttg aaccttttct tgaaagatac aaacaaggta aaattataaa
      721 aggattttta gcatttttta tatcatcaat gcattcatca tttaatgttt catcaaacaa
      781 ataatccaca tccataagat aaataaattc acttgaacac tgctctactg ccctatttct
      841 gagcaaactt tgacaaataa gttttgtata aaatttccct gaaactaatt ttacattact
      901 tttttttgaa caaatttttc taagatattt atcaaatata cttccacggt cattatgtcc
      961 aaaaacaatc tcaacctcat tactagatct ttttaaaata cttttaactt ttttcagtat
     1021 atcaaaaggc ctaagatcta aatcaacagg aataattaca ctatatttca ttttaaacat
     1081 ttcctatagc ataaagctgg ataatgccta caactctttc ttcttttcct actatgattt
     1141 ctttaatttt atgctttaac atgatctctt ctgcttcact tgccatagca tcaacatcaa
     1201 ctactttagg atttgtactc atgatttctt tagccttaaa gtcaaatctt ggcttatcat
     1261 ttgtttttaa agcacgacgc aaatccccat cagtgataat accgactaat ttttcatttt
     1321 caagcactac acaaagtcct agttttccac tagtcatcac atcaacaaga tcgttaaatt
     1381 ctgtatcagg atgcactata ggaagattgt ttgcaaccat aagatctttt actttggtta
     1441 aaagcttacg ccccaaactt ccccctggat gaaaaagtgc aaaatcgtca ggcttgaaat
     1501 ttcttacttt catcaaagca gccgctaaag catcccccat aactaaagtt gcagttgtcg
     1561 aagacatagg agcaagctgc aaagggcaag cttctttttc tacagctata tttaaaaaca
     1621 catcaccttg ttttacaaga gtagaatttt ctttaccgca cattactatg agtggaattt
     1681 tacgcttttt aatagcaggt ataattttta gaatttcttc agtttctcct gagtttgaaa
     1741 tagcgattaa aacatcttca ggagttagca ttccaaggtc tccatgcaaa gcctctcctg
     1801 gatggataaa aaaacttgga gtccccgtgc ttgccaaagt agctgctatc ttagctccta
     1861 tatgacctga tttacccatt ccacttacta tacaacgccc tttagtattt agcatcaaat
     1921 taacagcttg attgaaattt tcatctaaat ttttagccaa atccaaaatg gcttgtgctt
     1981 ctttttcaaa aacttcttta gctatttcaa gagtattcat gtttaagcct taaagtttaa
     2041 gtacaacatt tgttgcaatg gcaatttgat aaagaatctg tgttaacatt gaaaaaattt
     2101 gcaaattctc actatctact tttggtaata ctagtacaga atcacctggc ttcatattta
     2161 taccactatg gtatttttca gcttttccat tgcttcgtat caccaaaact tttgaagtat
     2221 cagctctttc tccataacct cctgcaagat tgatataata tcttaaatct tttcctttat
     2281 catacacaaa agctccgggc agagaaactt caccttgaac tatgataaga ttgtttttac
     2341 ttggcacatt gatagtatca ccatcttcta aaataactga actataagac tttggattat
     2401 caattacaat ttgtcctttt ggttgtactt gcttagctct ttggataaat tctaaaatcg
     2461 tttttgcttg ttgagctctt atagctgcac cttgagccgt aacagaacca ctggttaaag
     2521 ctaaagtttc aagctcttta agctgagcat tgataagttc tttttgagtt ctagctacac
     2581 tttttctaaa tacttgcaaa gcttgcatgt ttgattgcat attagcttta attagtttag
     2641 aaatatcttc taaagtcgtt cctttaccta caactaaagt ttttaaacca ttatgctcac
     2701 catttacact tatggttaga ttttcagaaa tatactcagg gtgaaattct acctcatccc
     2761 ccgttttaag taaaactttt gaaaattgca ttttattgta agcattgaca tcaagtttat
     2821 gatcttcacc ataacttttt acgatagcat tagttacgat aggcttagca cctgataccc
     2881 tagctaaatc ggctaaagtt ttaatatcat ttgaaagttc aaaacgaaaa ggcctttgca
     2941 catcgccatc aacaaaagcg taattttgaa catttcccac caaaatcaca tctccgcttc
     3001 taaaaggaaa aagattcatt tgtcctttta ataaaaaatc atataaatca atatttttta
     3061 tcacgctgtt attacgcaga atttgaatat ctctaaaact tccatattct aaatttatac
     3121 ctcctgctct atcaagatac tgtatcaccg aatcagaact aagcccttga taaagccctg
     3181 gagcattaac acttcctgtt acaaaaacac taacattttg ataagcattc atatctgcat
     3241 aaacaaaaac attattttta tagattttat tgacatgcgc ttttataacg cttacaaggg
     3301 cgctattttt cacacctagt aaatttacag ctcctacttt agggataaaa atatttcctt
     3361 gagaatccac tactaaaact tgagaaaatt caacagctcc ccaaatttta agactgattt
     3421 gatcgcctac tgcgatctta taatctgggt tataaactct ttgattataa tttttaaaat
     3481 ttccattaaa aagatgagct ccaaatacta aaatctgatg aatttttgta agattatttt
     3541 ctttattttc catatcatag cttgagctta aattttgatc tatgctagtt gtagtagaac
     3601 tttgatcttc tgctgaaatg atttgtgaaa catctacagc tccaaaacat aaaatacaac
     3661 taaaaaataa aattaatatt tttttcattt taatacttat gctcctctat aatcatttta
     3721 ataaatttaa taatcccaaa aatcaaagat aatacaataa acgctgttaa aatatcataa
     3781 attctttcgg gatattttgc actttctggg atatcaggac tttgaataat tacaagttgt
     3841 tttatttttc ttaatgcttc tattctagca ctttcataag cttttaaagc tgcttcatag
     3901 gctttttgtg caaaagtagc ttctatggtt aaatcttgaa atttagcagc caaatcatta
     3961 agcttttgag aagaattatt agccgaaatt ttggattttt ctcttaaaag ttgtttttta
     4021 attgcttcaa tttctgcctt aagtgcaact acttcaggtg ctgcatcatt catatagctt
     4081 tgcaaagtta aaagtttggc ttccttttga gctaaattag cttcaatttg tgcaaccaag
     4141 cttgctttag tttcagcttg ttttaaagga tcaaaaactc cgtatttatt ttgaaaagca
     4201 atcaaatcat tttgcgcttt ttgatatcgt tttttatatt tttgcacttc attttcagca
     4261 aaagccattt gctctctagc tgctttatgt gagatttcat taatgaactt ttcgctttct
     4321 tgcataatag tttgagcaat caaatgagct gatttaggtg taaaaccctc tacttcaact
     4381 ttcaaaagtt tagtagtttc atctgtatgc actttaactc ttgcttgata gtattcaaga
     4441 taagattcca tagaacttga atcccaaatt ttaaaaggca aatctatgta ttgttcttga
     4501 taaagacttt taagcttgat tttttcatct aaaattttta acatatcgct tgattctata
     4561 taacctttga gatagtttaa atcctcactt gctgtagaag tgctactaag caaagataaa
     4621 attccacttg cctgtgtact ttctccactt gttgatctaa catctaaaat catcgtgctt
     4681 acatatcttg gcgctgcaat taatacataa taaatcacaa caaaaatcat tataaaccaa
     4741 acaattttaa aagaattaaa tatgctcaaa tcttttattt ttgctagcaa agttttattt
     4801 tcttccatta agcttttcct tgatatacag ctattccttc atctatatca tcataaaccg
     4861 taatttgtcc attcttcata taaattattt tatcacacca ttctttaatt tcagctacat
     4921 tatgagatac cataataact tttgatttac tcaatctttc cctatataat ttcacgcttt
     4981 tttccctaaa agcaggatct ccaacagctc ctgcttcatc gattaaataa tagtcaaaat
     5041 caaaagccat gctaagtcca aaagctatcc tagcactcat tcctgaagaa taagtcttca
     5101 taggctcatc aaaaaatttt ccaagttctg caaaatcttc aacaaatttc actttttctt
     5161 gaagttcttt tcctttataa ccatacaccc tagctacaaa tttagcatta tctctagctg
     5221 ttaaagaacc ttgaaaagca ccgtttaaac ccaaaggcca agataatttt ttattcgtaa
     5281 ttattttgcc actatcagga agttctgctc cacttaaaag tcgcataaga gtggatttac
     5341 ctgctccatt atatcccatt aaacctatgc tacaattttc aggaaattca aaagtaaaat
     5401 ttttaaaaac ataatgcctt ccaccactaa atagaggata agattttgtt agattaatta
     5461 gttttatcat tctttttttg ccgccgttaa agcctgtctg ttatagtaat agataaaaag
     5521 tcctataaac aaaacaagca agatccaaaa tataggataa aaataactat attcatcttg
     5581 caagggataa ttctcaaaaa aattaaacct taaaagttcc attatatgaa gtaaaggatt
     5641 ataataaaat atatcaagca aaggacgagg agttagccaa gtaggaaata taatacctga
     5701 tgtccaataa aatactatac taaaataacc taacaaagtt cttaaaggct ctataaaatg
     5761 ccaaacaata gcaaaacaaa tccctaaagc aaaagctgaa catataagta aaaaaataca
     5821 aaataaaacc ccaagcaaat gaacaggaaa tacatccagc ctaaaaaacc accccgcaaa
     5881 aaagagtaca gtgataaaaa tcacaaaata aatacaaaac tcaagcaaag ttctagcaat
     5941 aaacacatgt ataggcttta caggtttata agcaaataaa gataaatttg cctgagtgcc
     6001 attcataagt tgagttacta tacttctaaa catgaaaaaa ggcataatac ctgaaattaa
     6061 aaacataaaa atagaaattc cctcaggcat tacctgatga tgatattcac gaatgattgt
     6121 tacaatagta gttaccacca cgataatact cataggttct ccaactaccc atatatatcc
     6181 aagataccta tttttaccaa atctcgtttt taattctcta aaaaataaag cataaattac
     6241 atttaacatt tattttatat acctataatt tttacataaa ctataatcat aactcatttt
     6301 tttaaacaaa ttatgaaaat ttatttttta caaaactcaa gctttttgct aaaccctaaa
     6361 gcattattag taaatttaag ccaaaaaagc tctaaaacgt aaatttttgc acttttatca
     6421 agttttgcaa aaggaaactt agaaaaataa attttcattt gatccttgct tgccatttta
     6481 aattcagcct tagcttgcac gccttttaaa aaagctattt tactttcttt ggatatattg
     6541 attgcgatac ttgagttttt actggctaat gttatatgct tagtatcctt atgagaagca
     6601 atgataaaag ctaaattttc ctcatcaaaa gcataaaaag cactggctgt gtaaacacct
     6661 ttttcatcga tcatagccca agataaaagc tgctcatttt ttataaattc taaaattctt
     6721 tcatccattg gtaaaaatta tactaaaata attttaaaaa tagccgattt tgttttataa
     6781 aatatgagga gaagaaatgc aaattgatgc tagtaaaaac caaagttttt ctatggacta
     6841 tacaacaaaa agtggtaaac atttagcctt atccatgtat gataatcaaa gtataagtta
     6901 tgcaaataac gaagaaggta aaactcttaa tcttaagcgt caatacggct ttagttttac
     6961 ttttgaaggc tctaaactaa ctcaaaatga tcttgatgaa attaaaaatg ccatgaaaga
     7021 agttgaacct atgatcaaag actttttggc aaattccaag gttaaagagc taaaaccaaa
     7081 agaaattata aaatcagcta tgcaaattgc aaatgttcta ccaacaccaa atgatgaaaa
     7141 tcatcaaaat gccatcatga ataattttac aaacaaactt aatgatttac ttaaacaaaa
     7201 tcaaacaaac aacaaagata tcaacgcttc catgcttgaa gacagtaaaa aactactagg
     7261 tgaagtttta gaacaaatga aaaaacaact tgaaaaacag caagaaaaag ccaaagaaaa
     7321 tcaaaataaa gcagatgata atttaaatct ttacgcttaa atcatataat attaaaaatt
     7381 atcaaggagt ttttacatga caaatattga aattttagaa aatatgctta aactccaaca
     7441 aaaacttaat gatgaaacca atggtttaaa ctgggaaaat ggttatacca aagaaggaaa
     7501 acttatcagt tggagacgct gtatctatat ggaatgtgca gagcttatag actcttttgc
     7561 atggaaacat tggaaaaaca tttcaagtcc aacaaattgg gaaaatgtgc gtatagagat
     7621 cgtcgatatt tggcatttta ttttaagtct tttacttgaa gaatatcaca ataaaagtag
     7681 aaatgatttt aaaattatag ccaatgaagt gatttcagta agtatttttc aagatttttg
     7741 taaagaagaa catcctaatg aaagtgatat ttacggaatt ttaaatgaca tagagcttat
     7801 tattcacaaa tgcagtggct ttgggtttaa tcttggagaa ttactttcaa catattttac
     7861 tctagctatt aaatgtgggc ttaatcttga aattctttat aaaacttaca taggtaaaaa
     7921 tgttttaaat atcttcagac aaaataatgg ctataaagat ggaagttata aaaaaacttg
     7981 gaatggaaaa gaagacaata aagttttaac tcaaatttta gaacaagaac ttgattttga
     8041 tactatttat aaaaaattag aagaatgcta taaaaaggca taatttgaat attgtaaagc
     8101 ttgcggtcaa agattttttc actcttaaat ttttaaaatt tgctctgatt cctttgatct
     8161 ttagtctttt gtttatgctt tttttgggag cgcttggttt ttcagcttta cttgattatt
     8221 ttaattcttt atttagcgtc ggggaagatt ccttttgggc atggttttat gctcttcatt
     8281 ttgtacaaat tttaatcacc atcataagtt ttttattttc aggttttatt gtaatttttg
     8341 cttcagtttt tttagccctt tttatcactt cttttcttac tcctttcatt gctaaagaaa
     8401 tcaaccaaaa atattaccat tatgataata taaacgaagt ttcaacctta aaaactatct
     8461 ttgaaatttt taaaattttt ataaaattta tagggatttt tttactttgc accttggctt
     8521 tatttttacc ttttatcaat atttttgtat attatcttgc tttttattat ctctttcaca
     8581 aacttttaat gattgatgtt acaagcacga ttttagacaa agaaagtttt aaaaattttc
     8641 attctgattt ttcgccttta gagtttaaat ttagcactct ttgtttttat ctactctcat
     8701 cagtaccact tttagggctt tttttacaag tgttttttgt gatttttctc acacatttag
     8761 gctatcgaag aattttaaaa ctagaggtta aggcttgaaa tatcgatttt atgattatat
     8821 aaataagctc ttaaaagtct tggaatttta gctattctac actcttcttt gaaattttta
     8881 ggtaattttt gacaagtttc atactcaaaa acaatagctt gtccgttttt atatacaagt
     8941 gctattttac cacctaaaac acaatcaccc tttaaaagct cttttctttg tgccgtgctt
     9001 aaaagcaaac ctttcatttt caccgctcta gcaatcaaac tttcattttt agggcaaata
     9061 agaagtcctt gaacttcttt aatattttca aaatcataaa gttttttcct atcttcacca
     9121 agataagaaa agcttctttt taaaccttga tgaaattcac tcacaaaggc attagagaat
     9181 ttttttctta tataatttct aaaatatttt tcattttcat tactctcatc atgaaaatga
     9241 aaaatatctt tttcttttaa aaaagatgaa atttcatctt tacttataaa gagtaaagga
     9301 cgtaaaagtg tataatttga gcgtttttca cactcttgca tacctaaaat ttcagccaaa
     9361 cctgatccac gagaaagttg catcaaaaac cattcaaatt gatcgtttaa atgatgagct
     9421 aaaataagat gatcataatc ttgctcaaag caaatttttt caaaaaaatc ataacgaaaa
     9481 tctctagctt ttttttcaaa attactttga aatttaggag catattttat gaaaattttt
     9541 ttatgaaatt tcaaagcaag ttctttggcc tttaactctt ctaaatcact attttttcta
     9601 gttttgtaat taatcatcac aagatcaaag tcgatctttt cttgcattag aagataaaaa
     9661 agcgcactag aatcgcttcc ataagaaaaa gcgagtaaat ttttacccct ttttaaaagg
     9721 gataaaattt catctttaat ttgcatctac ttttcttaaa gccttagcaa gaagcttttt
     9781 atcaaggttt tgcaaaattt cacattcata aatttgcccc atttccaaat ttccacattc
     9841 gctttcattg ataagaattt ccccatcaat ctctctatcc catcttaaat ctttagctgc
     9901 gatgaaaaac tctccctcgc tactttctcc tgtgcaaact actaaacgct tttgctctac
     9961 ttctttttca aaactttttt ctatgacttc atcaacaatt ttttctatga ttttaagtct
    10021 tttattgatc actttaaaag gcacttgctc catatcaaaa gcagccgtat cttcttcctt
    10081 agaatacgca aaaacactca ctctatcaaa accaaagtct ttaacaaatt cacaaagctc
    10141 ttcaaaatcc gcctcacttt cacctggatg tcctacgata aaacctgtgc gtaaaaagct
    10201 atttggcgca cttttcatta aatttagcat ttctttaagt cttgtgctat ttgccccacg
    10261 cttcatgatt ttaagcatat tatcacttat gtgctgtaaa ggcatatcaa aataatttac
    10321 aaaaatttca gaagctataa tgcgtttgat caaagcttca ctcgcactcg taggataaag
    10381 atacaaaatc ctagccgctc ttatgccttg aattttttcc acctcatcga ttaagcgtat
    10441 aagcccatct ttttcaccct tatcaaacaa ataagaactc gtatcttgtg cgataaaaga
    10501 aaagtcctta taacctctag ctaccaaatc tttaagttca gctataatgc tactaatctc
    10561 gcgggatttt aacttgcctt taaaacttgg aatcgcacaa aaagagcatt tttgattaca
    10621 accttcggcg atttttataa aagcatggga atttgaacct gtgataatgc gtttggaatt
    10681 ttcactctgc aaataagtcg aatttgaaaa taaatttgtt tttttaagta tcatttcatc
    10741 gattctttca taatcaccca cacctgtgaa aagatcaacc tcaggaagtt ctttcataag
    10801 ttcttcacgg taacgctgca tcaaacaacc cgtaaccacc aaaagagaat ctttttttct
    10861 ttgttcgtgc aaatccaaaa tcgcattaat gctttctttt tttgcactgt cgataaaacc
    10921 acaggtattt acgattaaaa catcggcttt gcttggctca tcgcaaagct cataagcact
    10981 aaggcgtcct agcatgatct cactatcgac taaattttta ttacaaccta gagataaaag
    11041 ataaagtttt ggcatttttc tcgctttttt tgataaaata aatttctaaa attatatcaa
    11101 aagattgata aggaaatttt tatgattaac aaaaatattg ttttgcttgg cgaaagtcat
    11161 tttgcattca aaaatggaat aactcaagga attctagatg ccggatttaa gtgttttaat
    11221 ctatctttag gtggaactcc aagtttgcaa aatttatatg agttaatcag aaataaaaaa
    11281 cttttagaaa atgcggattt aattattaca ggatcaaata ctcatgatat tgcacaatat
    11341 aattctttcg atttatttcc aaaaagctat caagtgatca attggcttta caaagaatta
    11401 tattttttaa agaaaaagat tatttgcttt attgctccaa cacctcaaaa atggttgaat
    11461 aaaaactgta taaaatatgt aaatacactc catataaaat tagcaattaa atatggattc
    11521 aatgtaatta acataaataa aaaacattta gaatcttcat atagcttaat acaaagagat
    11581 gaagctcatg attttgattg tattatgaga gaacttggga gaaatatagc aaataatatt
    11641 gaaaattttt cttttccaaa aaaaataaat attataaatg ataatccaca attttatttt
    11701 tatccaattg aaaaagcaat aaatttaaat ttcgctaatt tcaaattcaa acaaagttgg
    11761 ttatgcagtg aaaaagttta ttgcataaaa agtaaagaag taattagttt taataaaaat
    11821 acttttaatc taaatttatt aggagttcat ctttggaatg attcaggtat ttgtgaaatt
    11881 caaattaaaa atccaaaaga tcaaattttc aatcgaagtt taaattataa tttctcatac
    11941 ttttttgaca tatacgatag acaatttaaa ttcgctaatg atactaaaat tttaaataat
    12001 ggggtaaaca atataaatct tatctctttc ttcctagctt ctcctgaagg taactaccat
    12061 accgaaaaaa tagattttga agctttagct aatgaaaata tagaaatacc gaaagaatat
    12121 aatttcaatc atttaattcc tccaatagaa ttatacaagg agattataga tgaatattgt
    12181 tctataatgg atcccataaa actagctcct ttgcaaaatc aaatcaaaga aaaagataat
    12241 atcatctcta ctttaaatca agaaaaaaca acgctacaaa atgagcttag ttcttttcct
    12301 attaaaaaac aaaatttaga aataaaaaat ctagaacaag atttaatctt taaaaaatta
    12361 caaaataaaa aactagctaa acaaatgggt ataaaattaa atactataat acctaaacta
    12421 actatgataa atccaaattc agctaaagca agaattcata atcacttatc ttataaatta
    12481 gggcaagctt taatagaaaa ttcaaaaagt gtatttggat atataagaat gccttttatt
    12541 ttatcttata tagcagataa acacaaactt gaacaaaaaa tatataaaga aaaaataaaa
    12601 caaaacccaa gctttacttt accaccattg gaaacttatc ctgattataa tgaagcttta
    12661 aaagaaaaag aatgttttac
//
LOCUS       DAPWAA010000045        12266 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.045, whole genome shotgun sequence.
ACCESSION   DAPWAA010000045 DAPWAA010000000
VERSION     DAPWAA010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12266
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.045"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(111..1028)
                     /locus_tag="RTF91_001227"
     CDS             complement(111..1028)
                     /locus_tag="RTF91_001227"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDZ4944108.1"
                     /translation="MKLVLFLNMGGATNLQDCEVFLRNMFNDPYILGIKNRFLRKFIA
                     WIITKTRIKAMQENYKQMGGKSPLNELTQSLCDKLNLKQDTFKFDFINLYVSPFAKEV
                     LQKYTLNENDKIILFPLYPHHSCTTVTSSLKVLQSEISKQKIKAKVKIMDIFYKNELY
                     NQMIFSHILTKKSEFDAKTLIFSAHSLPQSIIDKGDLYEKHVNDHVEILKEKLKNHFD
                     EFILAYQSKLGPIKWLEPNTSDILANLNNKALIYPISFCIDCSETIFELGMEYKHLAK
                     QDYDLISCPNDSDEFIEFILNFINSSTHP"
     gene            complement(1025..1891)
                     /locus_tag="RTF91_001228"
     CDS             complement(1025..1891)
                     /locus_tag="RTF91_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDZ4944109.1"
                     /translation="MKIGIIGLGKMGQNHLNELSKNSHFKVNALFDLCKNPNLNAFDD
                     IFYDDLDKFLNQNNDIIIIATPTNSHLTIAKKVFKQCKCVLIEKPLALNLKEINEISN
                     LAKEYSVKVSVGFCERFNPAVLTLKKELENEEIISINIQRFSSYPQRISDVGILQDLA
                     VHDLDLLAFLSKQEIIKTHLLKKYTQDQTRESESIILCELEKCIASIHQSWNSTQKLR
                     KIHLVTKNHFYEANLNDFSLLKDGNFIEATQQNPLFGEHEALLKLIDNQSNHLANTSD
                     AYKVQEILERFA"
     gene            complement(1896..2969)
                     /locus_tag="RTF91_001229"
     CDS             complement(1896..2969)
                     /locus_tag="RTF91_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HDZ4944110.1"
                     /translation="MNFINLQAQYLAYKDEINAEIESVLSSSSFIGGAKLNEFEQNLA
                     DFVGIKHAIGCSSGTSALYLALRTLDIGKDDEVIVPSFTFIATAEVVALVGAKPVFVD
                     INLSNYNLDFEAVQKAITPKTKAVIAVSMFGQMSDLRALEEILKDKNITLIEDGAQSF
                     GGSFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILFNHGQTERY
                     KHKLIGINGRLDTLQAAILNVKLKYLEKELDKRQKLAQIYNTNLKNCQIPQINTNAFS
                     AYAQYSILVKDRASVLQKFEKANIPYAIHYPTPLHKQPCFSEFSNLELKNSEYASEHI
                     LSLPFSPFLSEEEQEQVICTFKD"
     gene            3082..5610
                     /gene="alaS"
                     /locus_tag="RTF91_001230"
     CDS             3082..5610
                     /gene="alaS"
                     /locus_tag="RTF91_001230"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDZ4944111.1"
                     /translation="MDIRKAYLDFFALKGHEITPSSPLVPDDATLLFTNAGMVPFKSI
                     FIGEVPCPNPPRKTSCQTCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQA
                     IAYAWEFVTEVLKLPKDRLYVTVHENDDEAFNLWQKHIQKERIYKFGDKDNFWQMGDT
                     GPCGPCSEIFYDQGQEHFNSSQDYMGGDGDRFLEIWNLVFMQYERSADGVLSPLPKPS
                     IDTGMGLERVTAIKEGKFSNFDSSLFMPIIDEIAKLCGKAYVYESGASFRVIADHIRS
                     SVFLLAQGVSFDKEGRGYVLRRILRRALRHGYLLGFKQAFMYKLVDIVCDLMGGHYTY
                     LNEKKDFIKEQICLEEERFLSTIENGIEIFNEELKNAKEIFSGEVAFKLYDTYGFPLD
                     LTADMLREKNLKVDEEKFELLMNEQKARAKASWKGSGDKTASGDFKNLLEKFGENHFV
                     GYEKTECESKILALLNEDLKEVFSLKDAGWVMLENTPFYATSGGQSADSGFIAKREVL
                     DTQKFFNLNLSFIKAGEELKVGDIIHAKIDTEKREQIARHHSATHLLHHALREILGSH
                     VSQAGSLVESNKLRFDFTHHKALSKEELESIEKRVNEMIINSSEAILENMPLEEAKKS
                     GAIALFNEKYQGNVRVLTLGESKELCGGTHVKNTAQIGSFYIIKESGVSAGIRRIEAV
                     VSKAALEFVKNQLEELFKIKNELKNNDILSGVKKLKNEILNLKNELKNSSKTELDSKN
                     IKGVEICVKRVDNGDIKAMIDDFKNKFNKAVILLIQIKDEKITLAAGVKDAPLKAGVL
                     VKEVAQILGGNGGGRDDFATAGGKDLSKIDEALKQSLETIEKAL"
     gene            5610..6161
                     /gene="maf"
                     /locus_tag="RTF91_001231"
     CDS             5610..6161
                     /gene="maf"
                     /locus_tag="RTF91_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HDZ4944112.1"
                     /translation="MLVLASSSISRANLLKEAKIDFRQVSFDYDENLDKNILPFLYVQ
                     KIVLEKERQFLGALAKDFQNQNLLFADSIVCVDEKILTKARDKKEAYEMLALQNGKHA
                     SILSAFLLIKPEKRVFSLSKTTLYFKNFDENALKDYIESGLYKGKAGCIMCEGFHQNF
                     ITQQVGNLSTALGLDIQTLKAYL"
     gene            6158..8089
                     /locus_tag="RTF91_001232"
     CDS             6158..8089
                     /locus_tag="RTF91_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HDZ4944113.1"
                     /translation="MKVLKYIFSFFTLLFIAGFIYVAYLFTSADTEGYTFKEYKPPLT
                     TQIYDRNGKLVANIFEQHRFYAPYEELPPRLIEALVAIEDTSFFEHNGVNIDAIFRAA
                     IKIIKSGGKTMEGASTLTQQFIKNTELTPERTITRKIREVLLAYKMETILTKEQILER
                     YLNFIFFGHGYYGVKTAALGYFHKNLNELSLKEIAMLVGMPKAPSSYDPTKHLDLSIS
                     RANNVISRMYNLGWISKSDYDTAIKEIPQVYDDTLTQNAAPYVVDEVIKQLSPNIKDL
                     KTGGYKIILNIDLDVQNMAQNALKFGYDEIVKRDKDVNLNTLNGAMVVVNHQSGDVLA
                     LVGGVDYEKSNYNRATQSMRQPGSSFKPFVYQVAINLGYSPMSEIADISRIFKGGVGN
                     NEDWKPKNEGGKFLGLITLKEALTRSRNLATINLALDIGLDVLYSKLMEFGFKDIPPN
                     LSIVLGSFGISLLEYSKFYTMFGNYGTIKDPQIIRQVQDQTGKTIMEFNSNKRKVSDE
                     AQSFLVLDMMRNVVEKGTGRNARVKDIEIAGKTGTTNKSVDAWFCGLTPEIEVIIWYG
                     NDNNKPMRYTEGGARTAAPVFREFLTQYIEKFPDTTRKFSIPNGVYRGNYKGESAYYT
                     TKSPLPKTNMKFNESEILF"
     gene            8643..10370
                     /locus_tag="RTF91_001233"
                     /pseudo
     CDS             8643..10370
                     /locus_tag="RTF91_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002908983.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
     gene            10437..11066
                     /locus_tag="RTF91_001234"
     CDS             10437..11066
                     /locus_tag="RTF91_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HDZ4944114.1"
                     /translation="MQMQEVIEKLKDILASEGKRELKTKDIAKELGIHPDTFNSMKFR
                     NSIPYPQILNFLNQRNISINYFFYGSSPKEQLESENKYKILKFYKTNASLGGGGINDL
                     IACSELVVDEKILSFFGSKECEFITCYGESMDPLIKDGSICVIDRNKTFKNKSICVIN
                     TRDGLFIKQVLKQDDGVILHSLNPLYEDIFYKNGDFLLIGAVIGELSKI"
     gene            11125..11394
                     /locus_tag="RTF91_001235"
     CDS             11125..11394
                     /locus_tag="RTF91_001235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944115.1"
                     /translation="MSDLRNKILNDLRDESLKICKELSSIKDTTKKAELIKNLALLND
                     IEMAINDGKAYKSEGLEVKVMLLDRSVCFLSFNHSTQSFKISSYL"
     gene            11404..11598
                     /locus_tag="RTF91_001236"
     CDS             11404..11598
                     /locus_tag="RTF91_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944116.1"
                     /translation="MKYPSVYVKLVGEDGNAFSILARVSKALKKAGVSKEEINKFQKE
                     AMSSDYNHLLNVVQDWVNAD"
     gene            11676..11957
                     /locus_tag="RTF91_001237"
     CDS             11676..11957
                     /locus_tag="RTF91_001237"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944117.1"
                     /translation="MKNTNLETLKENLENTLRYWYEIIKGELFVESLDTRLESLEEMK
                     ALILAIKTIISEKFNPKNLNTIIIKTEAKLDIVLEYNKNEDVYELAFRR"
     gene            complement(11961..>12266)
                     /locus_tag="RTF91_001238"
     CDS             complement(11961..>12266)
                     /locus_tag="RTF91_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004297138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDZ4944118.1"
                     /translation="KSFEYILKEYDYNEALFYLDPPYIGTENYYKNMPCFGIKEHELL
                     YNLLKNIKGKFMLSYNDCELVRELYKDFNFKELKVRYSLNNNVLKRKESKELLIMNF"
BASE COUNT         4589 a         1496 c         2003 g         4178 t
ORIGIN      
        1 atacaaaagt aatatttatt acataaatca ttttatttat ggtttacaac tgttttacaa
       61 taaaacaaga aatttttatc ccaagcttga tttagctaga ggttttcttg ctaaggatgt
      121 gtggatgaat ttataaaatt taaaataaat tctataaatt catcgctatc gttaggacaa
      181 cttatcaaat cataatcttg ttttgctaaa tgtttatatt ccatacctaa ttcaaaaatc
      241 gtttcagaac aatcaataca aaaagagata ggataaatca aagctttatt gtttaaattt
      301 gctaaaatat cacttgtatt tggctcaagc cattttatag gacctagttt agactgataa
      361 gctaagataa attcatcaaa atgatttttt agtttttctt ttaaaatttc tacatgatca
      421 tttacatgct tctcatataa atcgccctta tcaataatgc tttgtggcaa agaatgagct
      481 gaaaaaatca aagttttagc atcaaattcg ctttttttgg tcaaaatatg tgaaaatatc
      541 atttgattat aaagctcatt tttataaaaa atatccatga tttttacttt tgctttaatt
      601 ttttgctttg aaatttcact ttgtaaaact tttaaagatg aagttactgt ggtgcaagaa
      661 tggtgtggat aaagtggaaa aagtatgatt ttatcatttt catttaaggt atatttttgc
      721 aaaacttctt tggcaaaagg agacacataa agatttataa aatcaaattt aaaagtatct
      781 tgctttaagt taagtttatc acataagctt tgagtaagct catttaaagg ggattttcca
      841 cccatttgtt tatagttttc ttgcatggct ttgatacgag tttttgttat gatccatgct
      901 ataaattttc ttaaaaatcg attttttatc cctaaaatat aaggatcatt aaacatattt
      961 cttaaaaaaa cttcacaatc ttgtaaattc gtagctccac ccatgtttaa aaataaaact
     1021 aatttcacgc aaacctttct aaaatttctt gaactttgta agcatcactt gtgttagcta
     1081 aatgattaga ttgattatca ataagtttta acaaagcttc atgctctcca aaaagcggat
     1141 tttgttgagt agcttctatg aaatttccat cttttaacaa agaaaaatca tttaaattag
     1201 cttcataaaa atgatttttg gtaacaagat gaattttcct taatttttgc gtgctattcc
     1261 agctttgatg tatgctagct atacattttt caagctcaca caagataata ctttcacttt
     1321 ctcttgtttg atcttgggtg tattttttaa gcaaatgagt ttttattatc tcttgtttgc
     1381 ttaaaaaggc taataaatca agatcatgta cagctagatc ttgtaaaatt cctacatcac
     1441 tgattctttg cggataagat gaaaatcttt gtatattaat gctgataatt tcttcgtttt
     1501 caagttcttt ttttagagtt aaaactgcgg gattaaatct ttcgcaaaaa cccacactta
     1561 cttttacgct atattctttg gctaaatttg aaatttcgtt tatttctttt aaatttaagg
     1621 ctaaaggctt ctcgattaaa acgcatttac attgtttaaa aacttttttt gctattgtta
     1681 aatgtgaatt tgtgggtgtt gctatgatga taatatcgtt attttgattt aaaaatttat
     1741 ccaaatcatc ataaaaaata tcatcaaaag catttaaatt tggatttttg caaagatcaa
     1801 aaagtgcatt aaccttaaaa tgagaatttt tactaagttc atttaaatga ttttgcccca
     1861 tttttccaag accgatgata cctattttca taggattaat ctttaaaagt acaaataact
     1921 tgttcttgtt cttcttcgct taaaaaaggt gaaaaaggta aggataagat gtgctcgctt
     1981 gcgtattctg aatttttgag ttctaaattt gaaaactcac taaagcaagg ttgcttatgt
     2041 aaaggagttg gatagtgtat agcataaggt atattagctt tttcaaattt ttgcaataca
     2101 ctagctctat ctttaactaa aatgctgtat tgcgcataag cactaaaagc atttgtatta
     2161 atttgtggaa tttgacagtt ttttaaattt gtattgtaaa tttgtgctag tttttgtctt
     2221 ttatctaatt ctttttctaa atattttaat ttaacattta aaatcgctgc ttgtagagta
     2281 tcaaggcgtc catttatacc tattaattta tgtttataac gctcagtttg tccgtgattg
     2341 aataaaattc ttattttttt agcaatttca tcatcatggc aaaaaatagc tccgccatct
     2401 ccataagctc ccaaaggttt ggaaggaaaa aagctcgtgc atgaaatttt agctatagag
     2461 caggattttt ctcctttaaa acttccacca aaactttgtg cgccatcttc gattaaggtg
     2521 atatttttat cttttaaaat ttcttctaaa gcccttaaat cactcatttg tccaaacata
     2581 ctcaccgcta taacggcttt ggtttttggg gttattgctt tttgcactgc ttcaaaatca
     2641 agattgtaat ttgataaatt tatatccaca aaaacaggtt ttgcacccac taaagccacg
     2701 acttcagctg ttgctataaa agtaaaacta ggcactataa cttcatcatc tttgccgata
     2761 tctaaagttc ttaaggcaag atataaggca ctagttccgc ttgaacagcc tatagcatgc
     2821 ttaatgccta caaaatcagc caaattttgt tcaaattcat taagctttgc accgcctatg
     2881 aaagaagaac ttgataaaac actttcaatt tcagcattga tttcatcttt gtatgcgaga
     2941 tattgggctt gaagattgat aaaattcata aaaaacctta gagaaattaa gattaaataa
     3001 aaattttatt atattttagt tttacttaat ttaaagtaat tatatgatat gtttttataa
     3061 aaatttctta taggaaaact catggatatt agaaaagctt atttggattt ttttgcatta
     3121 aaaggacatg aaatcactcc atcaagccct ttggtacctg atgatgcgac tttgcttttt
     3181 accaatgctg gcatggtacc ttttaaaagt atattcatag gagaagttcc atgtccaaat
     3241 ccaccacgca aaacaagctg tcaaacttgc ataagagcag gtggaaaaca caatgattta
     3301 gacaatgtag gctatactgc acgccatcat accttttttg aaatgcttgg gaattttagt
     3361 tttggagatt attttaagga acaagctata gcttatgctt gggaatttgt aactgaggtt
     3421 ttaaaactac ctaaagatag actttatgta actgtacatg aaaacgatga tgaagctttt
     3481 aatttatggc aaaaacacat tcaaaaagaa agaatttata aatttggtga taaagataat
     3541 ttttggcaaa tgggtgatac tggtccatgt ggtccttgta gtgaaatttt ttatgatcaa
     3601 gggcaggaac attttaactc aagccaagat tatatgggcg gagatggaga tagattttta
     3661 gaaatctgga atcttgtttt tatgcaatat gaaagaagtg ctgatggagt acttagtcct
     3721 ttgccaaaac caagcattga tacaggaatg ggacttgaaa gagtaacggc gattaaagaa
     3781 ggtaaattta gcaattttga tagctcactt tttatgccaa ttattgatga aattgcaaag
     3841 ctttgcggta aagcttatgt ttatgaaagt ggagctagtt ttagagtaat agctgatcat
     3901 ataagatcaa gtgtattttt acttgcgcaa ggggtaagtt ttgacaaaga aggaagaggc
     3961 tatgttttgc gtcgtatttt gcgtcgcgct ttaagacatg gatatttgtt aggatttaaa
     4021 caggctttta tgtataaact tgttgatatt gtgtgtgatc ttatgggtgg gcattatact
     4081 tatcttaatg aaaaaaaaga ctttataaaa gaacaaattt gccttgaaga agaaagattt
     4141 ttaagtacta tagaaaatgg gattgaaatt tttaacgaag aacttaaaaa tgctaaagaa
     4201 atttttagcg gagaagtagc atttaaactt tatgatactt atggttttcc acttgattta
     4261 actgctgata tgttaagaga aaaaaatctt aaagttgatg aagaaaaatt tgaactttta
     4321 atgaatgagc aaaaagcacg tgctaaggct tcttggaaag gaagtggaga taagactgca
     4381 agtggagact ttaaaaactt gcttgaaaaa tttggagaaa atcattttgt aggttatgaa
     4441 aaaacagaat gcgaaagtaa aattttagct cttttaaatg aagatttgaa agaggttttt
     4501 agtcttaaag atgcgggttg ggtgatgctt gaaaatacac ctttttatgc aacaagtggg
     4561 gggcaaagtg ccgatagtgg ttttatagct aagcgtgaag ttttagacac acaaaagttt
     4621 tttaatctca atcttagttt tataaaagca ggagaagagt taaaagttgg tgatataatt
     4681 catgcaaaaa tcgatacaga aaaaagagaa caaatcgcac gccaccattc agctactcat
     4741 cttttacacc atgctttaag agaaatttta ggttctcatg taagtcaagc aggatctttg
     4801 gttgaaagca ataaattaag gtttgatttt actcatcata aggctttaag taaagaggag
     4861 ttagaaagca ttgaaaaaag agtgaatgaa atgattataa actcaagcga agcgatcttg
     4921 gaaaatatgc ctttagaaga agctaaaaaa agcggtgcta tagcattgtt taatgaaaaa
     4981 taccaaggca atgtgcgtgt tttaactcta ggagaaagca aggagctttg cgggggaact
     5041 catgttaaaa ataccgctca aataggaagt ttttatataa ttaaagaaag cggtgtgagt
     5101 gctgggatta gacgtattga agccgtagtt tccaaggcag ctttagaatt tgtaaaaaat
     5161 caacttgaag aactttttaa aataaaaaat gagcttaaaa ataatgatat tttaagcgga
     5221 gttaaaaaac ttaaaaatga aattttaaat ttaaaaaatg agcttaaaaa ctcaagcaaa
     5281 acagagcttg attctaaaaa tatcaaaggc gttgaaattt gtgtaaaacg cgtagataat
     5341 ggcgatatta aagctatgat tgatgatttt aaaaacaaat ttaataaagc agtgattttg
     5401 cttatccaaa taaaagatga aaaaatcact ctagcagctg gtgttaaaga cgcaccttta
     5461 aaagcaggag ttttagttaa agaagtggca caaattttag gcggaaatgg tggcggaaga
     5521 gatgattttg ctaccgcagg tggaaaagat ttaagtaaaa tcgatgaagc tttaaagcaa
     5581 agcttagaaa ctatagaaaa agcactttaa tgcttgtgct tgcttcaagt tccatttcaa
     5641 gagctaactt acttaaagaa gcaaagattg attttaggca agttagtttt gattatgatg
     5701 aaaatttgga taaaaatatt ttaccttttt tgtatgttca aaaaatagtt cttgaaaaag
     5761 aaaggcaatt tttaggtgcc ttggctaagg atttccaaaa ccaaaatttg ctttttgcag
     5821 acagtatagt ttgcgtggat gaaaaaattc tcactaaggc aagggataaa aaagaagctt
     5881 atgaaatgct tgccttacaa aatggcaagc atgcgagtat tttgtctgcc tttttactta
     5941 taaaacctga aaaaagagtt ttttctcttt caaaaaccac actttatttt aaaaattttg
     6001 atgaaaatgc tttgaaagat tatatagaaa gtggtcttta taaaggcaaa gcaggttgta
     6061 ttatgtgtga gggttttcat caaaatttca tcactcaaca agtaggaaat ttaagtaccg
     6121 ctttagggct tgatatccaa actttaaagg cttatttatg aaagtattaa aatatatttt
     6181 ttcatttttt actcttttat ttatagctgg atttatttat gtagcttatc tttttacaag
     6241 tgctgatact gaaggctata cttttaaaga atataaacca ccacttacaa cgcaaattta
     6301 tgatagaaat ggtaagcttg tggctaatat ttttgaacaa catcgttttt atgctcctta
     6361 tgaagaacta cctccacgcc ttatagaagc tttagttgct atagaagata caagtttttt
     6421 tgaacacaat ggagtaaata ttgatgcgat ttttagagcc gctataaaaa tcataaaaag
     6481 tggtggaaaa accatggaag gagcttcaac tcttacccag caatttatta aaaatacaga
     6541 attaactcca gaaagaacga tcacgcgtaa aattcgcgaa gtcttgcttg cttataaaat
     6601 ggaaacaatt ttaaccaaag aacaaatttt agaaagatat ttaaatttta tcttttttgg
     6661 acatggatat tatggggtta aaactgcagc tttgggatat tttcataaga atttaaatga
     6721 attaagtctt aaggagattg ctatgctagt gggtatgcca aaggcgccta gtagttatga
     6781 tcctacaaaa catttagatc tttctatttc aagagcaaat aacgttattt caagaatgta
     6841 caatttaggt tggatttcaa aatcagatta tgatacagct attaaagaaa ttccacaagt
     6901 ttatgatgat acactcactc aaaatgctgc tccttatgtt gtagatgaag tgattaaaca
     6961 attaagtcct aacattaaag atttgaaaac aggtggatat aaaatcattt taaatataga
     7021 tttagatgtt caaaatatgg cgcaaaatgc tttaaaattt ggttacgatg agatagtaaa
     7081 acgcgataaa gatgtaaatt taaacacttt aaatggtgct atggtagtag taaatcatca
     7141 aagcggtgat gttttagctt tggttggtgg ggttgattat gaaaaaagta attataaccg
     7201 agctacccaa agtatgcgtc agcctggaag ctcttttaaa ccttttgtat atcaagtagc
     7261 gattaattta ggatattcgc ctatgagtga aattgcagat atctctcgaa tttttaaagg
     7321 tggggtgggt aataatgagg attggaagcc taaaaatgaa gggggtaaat ttctaggttt
     7381 gattacttta aaagaagctt taacaaggtc aagaaattta gctaccatta atcttgcgct
     7441 tgatatcggg cttgatgttc tttattctaa gttaatggaa tttggattta aagatatacc
     7501 acctaattta tcgattgtgt tgggaagttt tggtatttcg ctcttggagt attcaaaatt
     7561 ttatactatg tttggaaatt atggcacgat taaagatcct caaattatca ggcaagttca
     7621 ggatcaaact ggcaaaacga ttatggaatt taattcaaac aagcgtaaag taagtgatga
     7681 agcacaaagt tttttagttt tagatatgat gagaaatgtt gttgaaaagg gtacagggcg
     7741 taatgcaagg gtaaaagata tagaaatagc aggaaaaacg gggacaacga acaaaagtgt
     7801 tgatgcttgg ttttgcggac ttacacctga aatagaagtg attatttggt atggaaatga
     7861 taataacaaa cctatgcgtt atacagaagg tggggctaga actgctgctc ctgtgtttag
     7921 ggaattttta actcaatata tagaaaaatt tcctgataca actagaaaat ttagtatacc
     7981 aaatggagtt tatcgtggaa attataaagg agaaagtgct tattatacta ctaaatcacc
     8041 actaccaaaa acaaatatga aatttaatga aagtgagatt ttgttttaat ggtttataat
     8101 tttacaaaag atgaaaatga taatattatt tatggcgata ttaatagata attgaataat
     8161 aaaatagttt ttcaaggaaa aataatatag tattctgtaa ggggtatttt aaaaaaatat
     8221 gtaactatct ttaaacaatt ttagcaaaaa tcctaaataa taggctttta aagcatataa
     8281 aaactacttt ttatctttcc tattttaaaa tataaaatat cccaaatatc ccaaaatgtc
     8341 cgttttatcc caagaaagtg attaaatgct gtttaaaaga cggataaata cgagctttga
     8401 tttttaaatt ctatatccta aaagtatttt ttgttctcta ggatagttac atttttgctt
     8461 aaaatattct tatgtttttt ggttatgtaa ctatctctac aaaacactat ataatcgcat
     8521 tttaaccact ttttgtacaa aaagaatatg taactattta taactttaag gtttggaaga
     8581 tagttacata gaaaacttaa atatttttat ataattatat aaatatttta caggagcata
     8641 taatagataa gattaatatt attgtaaatt ttttaaatga aaaatctaaa aaatgtttaa
     8701 ctataaatgg gccttggggt ataggtaaaa cttatttatg gaaacaagtt gaaaagaaac
     8761 tttctaaaat taacaaagat agaaaagttg tttatataga tctatttggt aaagaaagtt
     8821 ataagcaaat attagaagaa atggttttta aaatacatgc gagctataat aaaatagcaa
     8881 atattatttc acaaattata tctaaaactg caaaatttaa atccgctgga gtaattaaca
     8941 ttaatcccga tgctattttt tcttttttaa agaaagaaga ttttgaaaat attattgtgt
     9001 gttttgataa tatagaaaga aggtctgata atctttcttt gaaagaaatt ttaggacttg
     9061 taaatttact caaagaagaa aaagaatgta atgttgttat gatttttcac gaggaagaat
     9121 taaaagaaca agacagtaat ttggctgaaa ataataagga agaagagact gaacatgcca
     9181 aacaaaatag taaaaactgg tatcaaatat acaaagagaa agttattgac tgtgaaataa
     9241 ccataagaaa taatgatgaa gtagcaaaag caattataaa agataagata aacaaatata
     9301 ctaagattgc aaacgaaata aaaaatatta ttgaaaatat tatttttgaa gcgtatcaag
     9361 agcaatgtaa tgacaactta agattattat atcatgtgtt agaacatata gattatttta
     9421 acacgcaatg ttttttattc ttttgcgaat atggcaataa aaaaacattt tcagatgctc
     9481 taaaattaag ttacaaatca ttaatatttc agactaaaaa atatctttct attaaaatag
     9541 aagaaaatga ctcatcttca aattaccatc tttatgaaaa atatctaaaa aatatgtttt
     9601 atttaagtaa agaagaaaaa tatcaactaa gatatgactt ttatcaaacc ctaaaaattg
     9661 atttttattt cgagcttcaa aactgcaata tagaatattt agcaggcaat ttaagcgatg
     9721 atcaatttgt aaaagatatt gagaatttac tctcaaaaat agatctttat tcaaaaaatg
     9781 gaataactca ttgttcttat agcttttatc aaaatttact ttcagcctat acacaaatta
     9841 caaagaaaga attaaccaaa atagaagaaa agattaacaa acactatata gaagctcttg
     9901 ttgcgtaaga attagaattt gattttcatg atgattttaa atccgacatg gcacttttaa
     9961 aattattgga aaatgaaaaa tggaagcatt attatgaaga aactaaagaa aaatacaaaa
    10021 caaacaagta tgaaaatgtt aatgctttta ttaatagcta tgaaagcata gaaagtagct
    10081 ttaattttga agcaatcaaa cagtataatt tttttaaaag agaagaatta atacagctat
    10141 ttaaagaaaa caatgaattt tataggaaat tcttcaatca tttttctata aatatggctg
    10201 taaatcataa atttgatgat gatttaagca ataatttgct tcgagcttat ttagattttt
    10261 tagatttaga agaaaacaaa ataaaaaaaa gtgttgtttt aaaatatata gattcacaaa
    10321 atagcgtatt aagaaagttg ctaataaata aagatatcct ttcaaaataa aatattttca
    10381 tttctttttg taattttatg tttaaattct ttgaaattaa aatcaaagga attaaaatgc
    10441 aaatgcaaga agtgattgaa aaattaaaag atatacttgc tagtgaaggt aagcgtgaat
    10501 taaagactaa agatatagct aaagagttag gtattcatcc tgatactttt aactccatga
    10561 agtttagaaa ctccatccct tatccacaaa tattaaactt tttaaatcaa agaaatataa
    10621 gtattaatta cttcttttat ggaagctctc ctaaagaaca attagaaagt gaaaataaat
    10681 ataagatttt aaaattttat aaaacaaatg caagtttagg cgggggtggt ataaatgatt
    10741 taatagcttg ttctgaactt gttgtcgatg aaaagatttt aagctttttt ggaagtaaag
    10801 aatgtgagtt tatcacttgt tatggagaaa gtatggatcc acttataaaa gatggaagta
    10861 tttgtgtaat agatagaaat aaaactttta aaaacaaaag catttgtgtg attaatacta
    10921 gagatggact ctttataaaa caagttttaa agcaagatga tggagtgatt ttacactctt
    10981 taaatccttt atatgaagat atcttttata aaaatggaga ttttttgtta attggtgcgg
    11041 taattggaga actttccaag atatgacagc acacattaag acaaacgaag ctaatgttgt
    11101 cttatcaaaa caaaaggaga taggatgagt gatttaagaa ataaaatttt aaatgattta
    11161 agagatgaaa gtcttaaaat ctgtaaagaa ctctcaagca ttaaagacac taccaaaaaa
    11221 gcagaactta ttaaaaattt ggctttgtta aatgatatag aaatggctat taatgatggt
    11281 aaagcttata agagtgaagg cttagaggtt aaagttatgc ttttagatag aagtgtatgt
    11341 tttttaagct ttaatcacag tactcaaagt tttaaaattt caagttattt ataaggaaaa
    11401 gagatgaaat accctagcgt ttatgtgaaa ttagttgggg aagatggcaa tgcttttagt
    11461 attttagcaa gagtcagcaa agctttaaaa aaagcaggtg tgagtaaaga agagataaat
    11521 aaatttcaaa aagaagctat gagcagcgat tataatcact tgttaaatgt agtgcaagat
    11581 tgggttaatg cggattaaat ttaaaaagat gccaagcaac agcacacatt cagctaaacg
    11641 aagctaatgt atccttataa acaaaaggag ataatatgaa aaacacaaac cttgaaactt
    11701 taaaagagaa tttagaaaat actttaagat attggtatga aataataaaa ggtgagcttt
    11761 ttgtagaaag cttagatact agattagaaa gtttagaaga aatgaaagct ttaattttag
    11821 ccattaaaac aataataagt gaaaaattta atcctaaaaa cctaaataca atcattatta
    11881 aaacagaagc taaactagat attgtattag aatataataa aaatgaagat gtatatgaat
    11941 tagcttttag gagataactc ctaaaagttc ataatcaaaa gctctttact ttcttttctt
    12001 tttaaaacat tgttatttaa agaatatctt acttttaact ccttaaaatt aaaatcttta
    12061 taaagttctc ttacaagctc acaatcatta taagaaagca taaatttacc cttgatattt
    12121 ttaagtaaat tgtataaaag ctcatgctct tttattccaa aacaaggcat atttttataa
    12181 taattttcgg ttcctatata aggcggatca agatagaata aagcttcatt ataatcgtat
    12241 tcttttaaga tatattcaaa gctttt
//
LOCUS       DAPWAA010000046        11987 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.046, whole genome shotgun sequence.
ACCESSION   DAPWAA010000046 DAPWAA010000000
VERSION     DAPWAA010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11987
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.046"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(110..859)
                     /gene="mreC"
                     /locus_tag="RTF91_001239"
     CDS             complement(110..859)
                     /gene="mreC"
                     /locus_tag="RTF91_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDZ4944119.1"
                     /translation="MNNKIFYVLVLAFLVFISFYYGGLIKQNVLRINDFVISNFYNIE
                     DYVGEKISEHFNQVKQIQQLRVRNKELEDIAVKVTSFANQLNRILEDQNSTKYLPQVS
                     LTRVISYVQLNDYKKLWLDWSKIPISKNRGLIYQGYTAGIAINKNGRAMALLQGDDQC
                     VFSVYIGKSKIPGLIQGEDGRVMAKFIPKWAKINVGDEILTSGLDNIFFSDIPVGVVN
                     RVDDEDMYQSVEVKPYVEINIPAYLYIVDNL"
     gene            complement(852..1889)
                     /locus_tag="RTF91_001240"
     CDS             complement(852..1889)
                     /locus_tag="RTF91_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HDZ4944120.1"
                     /translation="MILDQLIGFFSSDMGIDLGTANTLVLVKDKGIVINEPSVVAVER
                     ERYGSKAKILAVGKEAKDMVGKTPGNIEAIRPMKDGVIADFDMTEKMIRYFVEKTHRR
                     KSFLRPRIIISVPYGLTQVERKAVRESALSAGAREVFLIEEPMAAAIGASLPIQEPKG
                     NLVVDIGGGTTEIGVISLGGLVVSKSIRTAGDKLDMSIVNYVKEKYNLVIGERTGEEI
                     KITIGSAIQLPKELSMVVKGRDQVSGLLSRIELTSEDVREAMGEYLKEIADALKMVLE
                     MMPPDLASDIVENGVVLTGGGALIRGLDKYLSEIVRLPVYIADEPLLAVAKGTGKALE
                     EISLLQQLTNE"
     gene            complement(1901..3124)
                     /gene="clpX"
                     /locus_tag="RTF91_001241"
     CDS             complement(1901..3124)
                     /gene="clpX"
                     /locus_tag="RTF91_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HDZ4944121.1"
                     /translation="MPGKCSFCNEVENPQRRILANENDDAFICEYCVEGAYSIIYGEE
                     KEFKEPKQSHNIEFKDITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKAELQD
                     DDTELFKSNILLVGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILT
                     RLLQAADGDVERAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVN
                     IPPKGGRKHPNQEFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDDGKEENKA
                     LLEKIEPDDLVHFGLIPELIGRLHVIASLNELNEEDMIRILTEPKNAIVKQYQKLFAI
                     DGVNLKFEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYKNYDIVITKEV
                     VKDNEKALLIKRKIS"
     gene            complement(3108..3908)
                     /gene="lpxA"
                     /locus_tag="RTF91_001242"
     CDS             complement(3108..3908)
                     /gene="lpxA"
                     /locus_tag="RTF91_001242"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDZ4944122.1"
                     /translation="MKKIHPSAVIEDGAQLGDDVVIEAYAYVSKDAKIGNDVIIKQGA
                     RILSDTTVGDHSRIFSYAIVGDIPQDISYKEEQKSGVIIGKNATIREFATINSGTAKG
                     DGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFV
                     KVGEGCMIAGASALSQDIAPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSRAFKIL
                     FRQGDLKENARILLENQESENVKKMCYFILETKRGIPIYRGKNNAWKM"
     gene            complement(3908..4348)
                     /gene="fabZ"
                     /locus_tag="RTF91_001243"
     CDS             complement(3908..4348)
                     /gene="fabZ"
                     /locus_tag="RTF91_001243"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDZ4944123.1"
                     /translation="MIDVMQIQEILPHRYPFLLVDKITELKVKEVVRGYKNISISDHV
                     FMGHFPGHPIYPGVLILEGMAQTGGVLAFESMEDKVDPKSKVVYFTGIDGAKFRNPVR
                     PGDRLDYEMSVVKNRGNMWIFKGQAFVDGNLVAEAELKAMIVDK"
     gene            complement(4447..5538)
                     /locus_tag="RTF91_001244"
     CDS             complement(4447..5538)
                     /locus_tag="RTF91_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDZ4944124.1"
                     /translation="MLVHICCSVDSHYFIEELRKTYPNEKIIGYFYDPNIHPLSEYEL
                     RFLDVKRSCDKLDIKLYKGEYEYEKWLKSVKGYENEPEKGARCEICFDLRMRSSVEFA
                     AKIGEKKLTTTLLTSPKKDLEQLKNALQKECEPYGVEFLAPDFRKNGGTQRQFALAKK
                     EMLYHQNYCGCIYGLKKQKQDKRFIDELMSPVNKQILPASIEAKIALYKKVTLLEKKG
                     VKFEILREKFLNYRLLSALIKLDKKPVKSYILFYSHFKNAYTRFSLDEENLKQNLKEG
                     FYRSTKDELVFVEFWRFNAFFKNKWKNFGDFLKKPLSVQAEIKWRNKFFGAYNLSPVI
                     ILEEILPLRYEVIAKSEIYHDNQEVLVKI"
     gene            complement(5538..5993)
                     /gene="bcp"
                     /locus_tag="RTF91_001245"
     CDS             complement(5538..5993)
                     /gene="bcp"
                     /locus_tag="RTF91_001245"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDZ4944125.1"
                     /translation="MSLNIGDKAPQFELLNQDGVKVALKDFIGKKVILYFYPKDNTPG
                     CTTEACDFSTNYDKFSDKNAVIIGISPDSVASHEKFISKFDLKHILLSDNEKEVAKAY
                     GVWGLKKNYGKEYEGIIRSTFVIDETGRITQIYSNVRVKDHALKVFESL"
     gene            complement(5990..6196)
                     /locus_tag="RTF91_001246"
     CDS             complement(5990..6196)
                     /locus_tag="RTF91_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HDZ4944126.1"
                     /translation="MPLVNIKLAKPALSKEQKAELIADITELLSKKYNKSKERVVVVL
                     EDVENYDIGFGGESVEAIKVKASK"
     gene            6368..7282
                     /gene="ilvE"
                     /locus_tag="RTF91_001247"
     CDS             6368..7282
                     /gene="ilvE"
                     /locus_tag="RTF91_001247"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HDZ4944127.1"
                     /translation="MISADKIWMDGKLVDFKDATLHFLTHSLHYGNAVFEGTRAYKTD
                     KGLAIFRLEDHTKRLLESAKITLLNCPFSQKELENAQIELLKANNFKSNVYIRPLIFL
                     GDGVMGLYHIKAPVKVGIAAWEWGAYLGEEGLEKGIKVKVSSFARNSVKSCMGKAKAS
                     ANYLNSQIAKFEAIEAGYEEALMLDEEGFIAEGTGECFFIVKDRVLITPPNDFSLKSI
                     TQDTVLKIAHDLGITVLRQRVSRDEVYTADEAFFTGTAAEITPINNIDARMIGNGLRG
                     PVTKKIQDAYFDVVYGRNEKYASMLTYI"
     gene            7294..8382
                     /locus_tag="RTF91_001248"
     CDS             7294..8382
                     /locus_tag="RTF91_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HDZ4944128.1"
                     /translation="MPADLNDYFNKKNGNSNNNGNNNRQNFNFKAPEINFKGFGKFSP
                     FVYGAIIIVLFLIVAKPFMVINSGEMGIKSTTGKYDPNPLEPGLHFFLPFVQKITIID
                     TRVRQINYASIEGSNENLSSGSGVINKNSISVLDSRGLPVSIDVTVQYRLNPLQVPQT
                     IATWSLNWENKIIDPVVRDVVRSVVGKYTAEELPTNRNTIAAQIEEGIRKTIEAQPNE
                     PVELRAVQLREIILPLKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGEAN
                     ATIISAKGKAMAVKIEADAQAYSNKEIANSLNTPLLNLKQIETQKEFNEALKVNQDAK
                     IFLTPGGAVPNIWVDTKDAKKQSSANIN"
     gene            8393..8923
                     /locus_tag="RTF91_001249"
     CDS             8393..8923
                     /locus_tag="RTF91_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 domain-containing protein"
                     /protein_id="HDZ4944129.1"
                     /translation="MEKLREIVLFYTTHLYLVDYMLILLVFFLFTCVLLLCVFLRHRP
                     IVALFIIAFDIVICFLVYIYGYKLIDSEVRARKTAITDQKIIQSSNTLIVDFNITNTS
                     KKNFKICKITAKIFADKIPNDNIIEEYKKKFIPFRKKSREIQDLKKNATQFQRISFEN
                     FNYENNYTTRLISECF"
     gene            8923..9432
                     /locus_tag="RTF91_001250"
     CDS             8923..9432
                     /locus_tag="RTF91_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 family protein"
                     /protein_id="HDZ4944130.1"
                     /translation="MHFTIFHIIVFIILLICFVLICVLIFLKVKQKEIALVSYTIATI
                     FTALFIYSIFLTINQFTTQADLSKLTYTRDLRHESVIISGKVQNLTKFEIRKCYLMLS
                     ILDQKQVGGEIFNDKNVRNAKMKNTSVSYTIEIIDTLPGNTYKEFKASVPFPPSFNNP
                     EFYHTLKCI"
     gene            complement(9702..10577)
                     /gene="zupT"
                     /locus_tag="RTF91_001251"
     CDS             complement(9702..10577)
                     /gene="zupT"
                     /locus_tag="RTF91_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HDZ4944131.1"
                     /translation="MQFTFEQIFIAILLTFFAGFSTAIGSIIAFFSRKDDLRVLSLGL
                     GFSAGVMIYISFMEILPTALKDFKNYYDSHWAELLGLACFFAGILISLLIDKLIPEDV
                     NPHEPKEDLSELKICPLPQKGQNPPKFHPGEKLQQINTKALRRTGIFTALAIAIHNFP
                     EGFATFISSLDNLTLGIAIAIAVAIHNIPEGLAVSLPIYHATGDKKKAFIYSALSGFA
                     EPLGAFVGALILLPFIGDLTLAISFAVVAGIMIFISLDELLPAAKTYDKAHDSLYGLI
                     AGMAIMALSLSLLGQ"
     gene            10783..>11987
                     /locus_tag="RTF91_001252"
     CDS             10783..>11987
                     /locus_tag="RTF91_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDZ4944132.1"
                     /translation="MNFRSLNIGTKLLLSVAIGVILGIVILVSTVSIYISQNMEKEAK
                     DSIFLASKRYTNYMAGILNESVVLTKGTALSLNEMFEHNDQVNTDLIESLIKNTFDSS
                     LYAAYSFLYLKDTSVLSDTQNIDKKYISSDGKTFAMIYFDQIGGKAGGIETIQTPNNF
                     KNLDIIQKIETNAKYGDKDSLFVGPPTKLNYDGNEFLGINFGMPIFNNKGKFIGVIGY
                     TLDFAEVSESILDPNLDFFEGGLRFLMTDEGIIAIHKNTNAILKTLNDINKDPSVELI
                     NRTIKEHKDAILDNYVASTGDLGYAAVSSFNTLNNSSHWSMVVTAPKSSILAPLKKLE
                     FIFIGISLIILLAILIIVYFCVKKIIGVRIPVILKSLENFFHFLNHEKNEVDLITIRA
                     DDELGKMGK"
BASE COUNT         4208 a         2107 c         1544 g         4128 t
ORIGIN      
        1 ctcatttgat tatagaaatt tattagatga tttaacaaaa ctttcagtat tgaaaaataa
       61 ttagtaaagc aaaatatgga aaattatctt taaaagtcta agtcttgatt tacaaattat
      121 ctactatata caaataagca ggaatattaa tctcaacata aggctttact tctacacttt
      181 gatacatatc ctcatcatca accctattca caactccaac agggatatct gaaaagaaaa
      241 tattatcaag tccgcttgtt aagatttcat ctccaacatt aatttttgcc cattttggaa
      301 taaacttagc cataacccta ccatcttcac cttgaattaa acctgggatt ttggattttc
      361 ctatataaac agaaaaaaca cactgatcat caccttgcaa aagagccatt gctctaccat
      421 ttttattaat agctattcct gcagtatacc cttgatatat taaaccacga tttttactaa
      481 taggaatttt actccaatct aaccataatt ttttataatc atttaactga acataagaaa
      541 taactctagt taaagaaact tggggtaaat attttgtaga attttgatcc tctaaaatac
      601 gatttaattg atttgcaaaa ctagttactt ttacagcaat atcttctaat tctttatttc
      661 taactcttaa ttgctgaatt tgctttactt gattaaaatg ttctgaaatt ttttctccta
      721 cataatcttc aatattataa aaattactta taacaaaatc attaatacgg agaacatttt
      781 gcttgataag tcctccataa taaaaagata taaaaaccaa aaaggctaag acaagaacat
      841 aaaaaatctt attattcatt ggttaattgt tgtaataatg aaatttcctc taaagcttta
      901 cccgttcctt ttgctacagc taaaagtggt tcatctgcaa tataaactgg caaacgtaca
      961 atttcactta aatatttatc aagaccacgg attaacgccc caccacctgt taaaaccacg
     1021 ccattttcca ctatatcact tgctaaatca ggcggcatca tttcaagaac catttttaaa
     1081 gcatcagcaa tttcttttaa atactcaccc attgcttctc ttacatcttc gcttgtaagc
     1141 tcgatacgac ttaaaagccc acttacttga tcgcgtcctt ttactaccat agaaagctct
     1201 tttggaagtt gaattgctga acctatagtg attttaatct cttcgccagt tctttcacct
     1261 atgacgagat tgtatttctc ctttacataa ttaactatgc tcatatcaag tttatccccg
     1321 gccgtacgaa tagattttga aacaacaagc ccacctaaag aaatcactcc gatttcggta
     1381 gttccacccc ctatatctac taccaaattt cctttaggtt cttgtatagg caaacttgca
     1441 cctatagctg ctgccatagg ttcttcaatc aaaaatactt ctctcgcacc tgcacttaaa
     1501 gcactttctc ttactgcttt tctttctact tgagttaaac cataaggaac agaaatgata
     1561 atcctagggc gtaaaaagct ttttctacga tgtgtttttt ctacaaaata acggatcatt
     1621 ttttcagtca tatcaaaatc cgcaatcaca ccatctttca taggacgaat agcttcgata
     1681 ttacctgggg tttttcccac catatcctta gcttccttgc ctacagctaa aatttttgct
     1741 tttgaaccat atctttctct ttcaactgcc acaacagaag gctcattaat cactatgcct
     1801 ttatctttta ccaaaactag cgtattagcc gttcctaaat caattcccat gtcactagaa
     1861 aaaaatccta taagttgatc taatatcatt tctatccttt ttaacttatt tttcttttta
     1921 tcaataatgc tttttcattg tctttaacaa cttctttggt gattacaata tcatagtttt
     1981 tatattctgg caactcaaac attaaatcca ccatcatttc ttctataata cttctaagtc
     2041 ccctagcccc tgtttttctc tccaatgcaa gttgtgcaat cgctcttaaa gcatcttctt
     2101 caaattttaa atttacccca tcaatagcaa aaagcttttg atattgttta acaatggcat
     2161 ttttaggctc agttaaaatt cttatcatat cttcttcatt aagctcattt aaagatgcaa
     2221 tcacatgcaa acgacctata agctcgggaa tcaaaccaaa atgcaccaaa tcatcaggtt
     2281 caattttctc aagcaaagct ttattttctt cttttccatc atcaaaaaaa cccacaactt
     2341 tatcgccaag ctttcttttt aatatggttt ctaaaccatc aaaggctccg ccacaaacaa
     2401 ataaaatatt tgaagtatca atttgtataa attcttgatt tggatgtttt cttcctcctt
     2461 ttggtgggat atttaccaaa cttccttcta taatcttaag caaagcctgt tgcacaccct
     2521 ctccacttac atcacgagta atggaacgat tttcactcat tctagcaatc ttatcaatct
     2581 catcaataaa cactatgcct ttttgagctc tttccacatc tccatctgca gcttgcaaaa
     2641 gacgcgttaa gatattttct acatcttcac ctacatatcc tgcttcagtt aaagaagttg
     2701 catcacaaat tgctataggc acatctaaaa atttagctaa agtctgtgca agtaaagtct
     2761 ttccacttcc cgttggtcca acaagtaaaa tatttgactt aaaaagctcc gtatcatcat
     2821 cttggagttc tgccttaaaa agtcttttat aatgattata tactccaaca ctaaaaactt
     2881 ttttagctct atcttgtcct ataacataac gatctaaata tgcttttaat tcttttggag
     2941 taatatcttt aaattctata ttatggcttt gtttaggttc tttaaattcc ttttcttctc
     3001 cataaataat actataagca ccttcaacac aatattcaca aataaaagca tcatcatttt
     3061 catttgccaa aattcttctt tgtggattct ccacttcatt gcaaaaacta cattttccag
     3121 gcattatttt tacctctata aataggaatt ccacgctttg tttctaatat aaaataacac
     3181 atttttttaa cattttcact ttcttgattt tcaagtaaaa ttctagcatt ttcttttaaa
     3241 tccccttgtc taaataaaat cttaaaagct ctactgagtc tatccacttc atctttatca
     3301 aaacggcggc gaatacctac taaatttaaa cttctaatgc ttgcacgatt tccttctgcc
     3361 aaacaaaaag gtgctatatc ctgagaaagt gcacttgctc ctgctatcat acaaccttca
     3421 cctactttta caaactgatg aataggcgta agcccaccta caaccgtaaa atctccaagc
     3481 tccacatgtc ctgctaaagt tgcattatta gctaaaataa tattatttcc caaaagacaa
     3541 tcatgagcaa tatggcaata agccataata aaagcattat ctcctatacg agtaaaacca
     3601 tctcctttag ctgtgcctga atttatcgtt gcaaattctc taatagttgc gttttttcct
     3661 ataataacac cacttttttg ttcttcttta taagatatat cttgaggaat atcacccact
     3721 atagcataag aaaatatacg ggaatgatca cctacagttg tatccgaaag aattcgagcg
     3781 ccttgcttga tgataacatc attgcctatt ttagcatctt tgctcacata agcataggct
     3841 tctattacaa catcatcacc aagttgtgca ccatcttcaa tcaccgcact tggatgaatt
     3901 tttttcatca tttatccact atcatggctt taagttcagc ctctgcaact aaatttccat
     3961 ctacaaaagc ttgcccttta aaaatccaca tattaccgcg atttttaacc acactcattt
     4021 cataatcaag tctatcaccc ggacgaacag gatttctaaa ttttgctcca tctatacctg
     4081 taaaataaac tactttactt tttggatcta ctttatcctc catactttca aaagccaaaa
     4141 ctccacctgt ttgagccata ccctctaaaa tcaagactcc aggataaata ggatgccctg
     4201 gaaaatgtcc cataaaaaca tgatcactta tgctgatatt tttatatcca cgcaccactt
     4261 ctttaacttt taattctgta attttatcta ctagcaaaaa aggataacgg tgtggtaaga
     4321 tttcttgaat ttgcattaca tctatcatta ttaaattaac cttgaaaaca attaaaaatt
     4381 ttattatata aaaaaatcat taaaaaatta ttacactaaa caaaaaagtt tttcttggta
     4441 aatttcttaa atttttacaa gcacttcttg attatcatga taaatttcac tttttgctat
     4501 cacttcatat cttaaaggca aaatctcttc aagtatgata acaggactaa gattataagc
     4561 tccaaaaaat ttattacgcc atttaatttc tgcttgcaca ctcaaaggtt tttttaaaaa
     4621 atctccaaaa tttttccatt tatttttaaa aaatgcgtta aaacgccaaa attccacaaa
     4681 aaccaattca tctttagtac ttctataaaa accttctttt aaattttgtt ttaaattttc
     4741 ttcatctaaa gaaaatcttg tataagcatt tttaaaatgt gaataaaaca aaatataaga
     4801 tttaacgggc tttttatcta attttatcaa agcacttaaa agacgataat ttaaaaattt
     4861 ctctcttaaa atttcaaatt ttacaccctt tttttctaat aaagttactt ttttataaag
     4921 agctattttt gcttctatac ttgcaggtaa aatttgttta tttacaggag acattaattc
     4981 atcaatgaaa cgtttatctt gtttttgttt tttaagtcca taaatacaac cacaataatt
     5041 ttgatgataa agcatctctt tttttgccaa agcaaactgc ctttgagtgc caccattttt
     5101 acgaaaatca ggagctaaaa actctacccc ataaggctca cattcttttt gtaaagcatt
     5161 tttcaattgt tctaaatctt ttttaggact ggttaaaagt gtagtagtaa gctttttttc
     5221 tcctatttta gctgcaaatt caacactaga tctcattctt aaatcgaagc aaatttcaca
     5281 tcttgcaccc ttttcaggct cattttcata accttttacc gacttaagcc atttttcata
     5341 ctcatactca cccttataaa gtttaatatc aagcttatcg cacgatcttt ttacatctaa
     5401 aaatcttaat tcatattcac ttaaaggatg aatgtttgga tcataaaaat atcctataat
     5461 tttttcatta ggataagtct ttctaagctc ttcgataaaa taatgactat caacactgca
     5521 gcaaatatgc actaacatta aagactttca aacactttta aagcatgatc ttttacacga
     5581 acattgctat aaatttgagt gatccttcct gtttcatcga taacaaaagt ggaacgaata
     5641 atgccttcat attctttccc ataatttttc ttaagccccc aaactccata agcttttgcc
     5701 acttcttttt cattatcact aagcaaaata tgtttcaaat caaatttaga gatgaatttt
     5761 tcatgacttg ctacactatc aggacttata ccaataatca ctgcgttttt atcgctgaat
     5821 ttatcataat ttgtgctaaa atcacaagct tctgtggtgc aacctggagt attatctttt
     5881 ggataaaaat acaaaattac ctttttacca ataaaatctt ttaatgctac ttttactcca
     5941 tcttgattta aaagttcaaa ttggggtgcc ttatctccta tatttaaact catttgcttg
     6001 cctttacttt aatggcttca acgctttctc caccaaagcc tatgtcgtaa ttttctacat
     6061 cttctaaaac tactacaact ctttctttac ttttattgta ttttttgctt aaaagctccg
     6121 taatgtcagc tataagttca gctttttgtt ctttgcttaa agcaggtttt gctaatttaa
     6181 tatttaccaa tggcatgatt tttccttttt taataataat ttttcataat tatttcaaaa
     6241 aatacctaat attttttaac aataagcttt aatttaataa aagcttattg ttagtatatt
     6301 tttgataaaa tctctaacta gttcttaaaa taatattttt taagaaataa ataacaaaag
     6361 gtaaaaaatg atctcagcag ataaaatttg gatggatgga aaattagttg attttaaaga
     6421 tgcaactttg cactttttaa cccattcttt gcattatggt aatgctgttt ttgaaggaac
     6481 tagagcctat aaaacagata aaggcttagc aattttcaga cttgaagatc acaccaaaag
     6541 acttttagag tctgcaaaaa tcactctttt aaattgtcct ttttctcaaa aagaacttga
     6601 aaatgcacaa attgaactct taaaagcaaa taattttaaa agcaatgtct atatccgccc
     6661 tttgattttc ttaggtgatg gagttatggg gctttatcat ataaaagctc ctgtaaaagt
     6721 cgggattgct gcctgggaat ggggtgctta ccttggagaa gaaggtttag aaaaaggtat
     6781 aaaagtaaaa gtttcatctt ttgcaagaaa tagtgttaaa tcatgcatgg gaaaagccaa
     6841 agcaagtgca aattatctga actctcaaat tgcaaaattt gaagctattg aagcaggcta
     6901 tgaagaagct ttaatgcttg atgaagaagg ttttatcgca gaagggacag gagaatgttt
     6961 ctttatcgta aaagatagag ttttaatcac acctccaaat gatttttctt taaaaagcat
     7021 tactcaagat acagtgctta aaatcgctca cgatcttggt atcactgtac ttcgtcaaag
     7081 agtttcaaga gatgaagttt acactgctga tgaagcattt tttaccggaa cagccgctga
     7141 aatcactcct attaacaata ttgatgcaag aatgatagga aatggtttaa gaggacctgt
     7201 aaccaaaaaa attcaagatg cttattttga tgtagtttat ggacgcaatg aaaaatacgc
     7261 atctatgtta acttatattt aaaaaggaaa taaatgccag ctgatttaaa tgattatttt
     7321 aataaaaaaa atggaaattc taacaataat ggaaacaaca accgtcaaaa tttcaatttc
     7381 aaagcaccag aaattaattt taaaggcttt gggaaattct ctccgttcgt ttatggggcg
     7441 attattattg ttttattttt aattgttgca aaacctttta tggtgataaa ttctggagaa
     7501 atggggatta aatcaaccac aggtaaatat gatccaaatc cattagaacc aggacttcac
     7561 tttttcttgc cttttgtgca aaaaataacc ataatcgata ctagagtaag acaaatcaac
     7621 tacgcttcta tagaggggag taatgagaat ttatcttcag gttcaggcgt tattaataaa
     7681 aatagtattt ctgtacttga ctctcgtgga ttgcctgtat ctattgatgt tactgtgcaa
     7741 taccgcttaa atcctttgca agttcctcaa accatagcta cttggagcct aaactgggaa
     7801 aataaaatta tcgatccagt agttcgtgat gtagtgcgaa gtgttgtagg aaaatataca
     7861 gccgaagaac ttccaactaa tcgtaataca atagccgctc aaatagaaga aggtataaga
     7921 aaaactatag aagcacaacc aaatgaacct gtagaacttc gtgctgtaca acttagagaa
     7981 attatcttac ctttaaaagt aaaagaacaa attgaacgcg tgcaaattgc gaaacaagaa
     8041 gctgaaagaa ctaaatatga agtagaaaga gccaatcaag aagctttaaa aaaagctgcc
     8101 ttagctgaag gggaagcaaa tgcaaccata atcagtgcaa aaggtaaagc aatggctgtt
     8161 aaaatagaag cagatgcaca agcttattcc aacaaagaaa ttgcaaacag cttaaacact
     8221 cctttactta atttaaagca aattgaaact caaaaagaat ttaatgaggc tttaaaagtc
     8281 aatcaagatg ctaaaatttt cctaactcca ggtggagcag tgccaaacat ttgggttgat
     8341 actaaagatg ctaagaagca aagttctgct aatataaact aaggatatac aagtggagaa
     8401 actaagagaa atcgtgcttt tttatactac tcatttatat ttagtggatt atatgctgat
     8461 tttattagtt ttttttctct tcacttgtgt tttacttctt tgtgtatttt tacgccatag
     8521 acctatagtg gcacttttta ttattgcatt tgatattgtt atttgttttt tagtttatat
     8581 ctatgggtat aaacttatag atagtgaagt aagagctcga aaaactgcta ttacagatca
     8641 aaaaataata caaagctcaa atactttaat tgttgatttt aacattacaa atacttcaaa
     8701 aaagaatttt aaaatatgta agattacagc taaaattttt gcagataaaa tacctaatga
     8761 taatatcata gaagaataca aaaagaaatt tatccctttt agaaaaaaaa gtagagaaat
     8821 tcaagatcta aagaaaaatg caacacaatt tcaaagaatt tcttttgaaa attttaacta
     8881 tgaaaacaac tataccacac gcttaatctc ggagtgtttt taatgcattt tacgattttt
     8941 catattatag tttttattat tttgcttatt tgttttgttt tgatttgtgt tttaattttt
     9001 ctaaaagtta aacaaaagga aatcgcctta gtttcttata ccatagcgac tatttttact
     9061 gcacttttta tatattctat atttttaaca atcaatcaat tcaccactca agccgatctt
     9121 agtaaactaa cttacacaag agatttaaga catgaaagtg ttattataag cggaaaagtt
     9181 caaaatctta ctaaatttga aattagaaaa tgctatttga tgcttagtat actagaccaa
     9241 aaacaagtag ggggagaaat tttcaatgac aaaaatgtcc gcaatgccaa aatgaaaaat
     9301 acaagcgttt cttatactat agagatcata gatacacttc caggtaatac ttataaagaa
     9361 tttaaagcta gcgttccttt tcctccaagc tttaacaatc ctgaattcta tcacacctta
     9421 aaatgtattt gatttaagaa attaaccaat aaaaaattct aactttagat ctaaaaacgc
     9481 ctttcattta ctcacccaag ttgcttacat ctcaactttg ccacaagctt aaaaatactt
     9541 ataagagctt attttaaaga tgcaaaaaaa cttggcatta aaaatggcga tgtagtggcg
     9601 gtgaagtcat gcaaggcgtg ataagacttt aaattcgaag gtaaattacc aaaacttgct
     9661 gcctttaaca caccaaaaag gcaaactaaa tttgagaatt tctattgtcc aagtaaactt
     9721 aaacttaaag ccattattgc cattcccgct ataagtccat acaaactatc atgagcctta
     9781 tcataagttt ttgcggcagg caaaagctca tcaagagata taaagatcat aattcctgca
     9841 accacagcaa aacttatagc taaggtaaga tcacctataa aaggtaataa aatcaaagct
     9901 ccaacaaaag cacccaaagg ctctgcaaaa cctgaaagtg ctgaataaat aaaagctttt
     9961 ttcttatccc ctgtagcatg ataaattggc aaactcacag ccaaaccctc agggatatta
    10021 tgtatagcca cagctatagc tatagcaatt cctaaagtaa gattatcaag acttgagata
    10081 aaagtagcaa aaccctctgg aaaattatgt attgcgatag ctaaagctgt aaaaattcct
    10141 gtacgtctta aagctttagt attgatttgt tgtaattttt ctccaggatg aaactttgga
    10201 ggattttgcc ctttttgagg taagggacaa atttttaact cacttaaatc ttctttaggt
    10261 tcatgaggat taacatcttc aggaattaat ttatcaatca ataaagatat taaaattcca
    10321 gcaaaaaaac aagctagtcc taaaagttca gcccaatgtg aatcataata atttttaaaa
    10381 tctttaagcg cggtaggcaa aatttccata aaagaaatat atatcattac tccagctgaa
    10441 aagccaagtc ctaaagaaag cactcttaaa tcatctttgc gagaaaaaaa ggctattata
    10501 gaacctatag ctgtagaaaa acctgcaaaa aaagttaata gtattgcgat aaaaatttgt
    10561 tcaaatgtaa attgcattaa taattcttat taatatatag tattttgtta agattattta
    10621 tatttgtaaa aagttaatat atagtaagaa tatattaaaa aaaaaaaaaa ataaaatttt
    10681 taagaaaatt ttaatacttt aaaatgtact attatcaaca aatttaattt ctattaaata
    10741 tagaaatttt aaaaacttta aaaatttaat acaaggaata ttatgaattt tcgttctcta
    10801 aatataggca ctaaacttct tttatctgta gctataggag taattttagg catcgttata
    10861 ctggtttcaa cagtatctat atacatttcc caaaatatgg aaaaagaagc taaagattca
    10921 atatttttag cctcaaaaag atacacaaat tatatggcag gtattttaaa tgaatctgtt
    10981 gttcttacta aaggaactgc actttcatta aatgaaatgt ttgaacataa cgatcaggtt
    11041 aacactgatt taattgaaag tttgataaaa aatacattcg atagtagttt atatgcagcc
    11101 tactcatttt tatatttaaa agatacttca gtattgagtg atactcaaaa cattgataaa
    11161 aaatatataa gttctgatgg taaaactttt gctatgattt attttgatca aatcggtgga
    11221 aaagctggcg gaatagaaac aattcaaaca ccaaacaatt ttaaaaattt agatattatt
    11281 caaaaaattg agacaaatgc taaatatgga gataaagata gtttatttgt tggacctcca
    11341 actaaactta actatgatgg aaacgagttt ttaggtatta attttggaat gcctattttt
    11401 aacaataaag gcaaatttat cggagttatt ggctatactt tagattttgc tgaagtttct
    11461 gaatctatac ttgatccaaa cttagatttt tttgaagggg gtttaaggtt tttaatgaca
    11521 gatgaaggta ttattgctat tcataaaaat acaaatgcca ttttaaaaac attaaatgat
    11581 ataaacaaag atccttcggt agaattaatt aacagaacaa tcaaagagca taaagatgct
    11641 atattagata attatgtcgc ttcaactgga gatttaggtt acgcagcggt ttcatctttt
    11701 aatactctga ataattcaag ccattggagt atggttgtaa ctgctcctaa aagttcaatt
    11761 ttagcacctt tgaaaaaact agaatttatt tttattggta tttctttaat tatattactt
    11821 gctatcttga taatagttta tttttgtgtt aagaaaataa ttggtgttag aattcctgtc
    11881 attttaaaat ctttagaaaa tttctttcac ttcttaaatc atgaaaaaaa tgaagttgat
    11941 ttaatcacca tcagagctga tgatgaactt ggaaaaatgg gcaaaat
//
LOCUS       DAPWAA010000047        11461 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.047, whole genome shotgun sequence.
ACCESSION   DAPWAA010000047 DAPWAA010000000
VERSION     DAPWAA010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11461
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.047"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            431..728
                     /locus_tag="RTF91_001253"
                     /pseudo
     CDS             431..728
                     /locus_tag="RTF91_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778403.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1052..1201
                     /locus_tag="RTF91_001254"
     CDS             1052..1201
                     /locus_tag="RTF91_001254"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944133.1"
                     /translation="MKNILLSLMLVLLSGYFNDKPKCDDDEWVYLEYGLNEQSLRPHF
                     KFCLI"
     gene            1405..2982
                     /locus_tag="RTF91_001255"
     CDS             1405..2982
                     /locus_tag="RTF91_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDZ4944134.1"
                     /translation="MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFL
                     KILSGEIESSSGEIVFDEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYEALKEKEKL
                     YMSEEFTDEINERLGELEIITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADK
                     FKVLLAQVLFLGADVLFLDEPTNNLDLEAISWLENELLRHEGTLVVISHDRHFLNKIC
                     TRILDVDFKQIRDFAGNYDDWYMASTLLAKQAELKRDKTLKEREELENFIRRFSANAS
                     KAKQATSRAKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLEFKGISKAYDKQLFS
                     NLELKIEKNDKIALIGANGVGKSTLAKIIAHAISPDSGSIHLGATIELGYFPQDTSNL
                     ICENLKLYEWLMSEKFKDLDEIRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLML
                     ERPNFLLLDEPDNHLDLESIIALGEALYNFKGVVLCISHDRELVSAFANRIWCLKNGK
                     LTDFRGTYQEFLGENDG"
     gene            2972..3307
                     /locus_tag="RTF91_001256"
     CDS             2972..3307
                     /locus_tag="RTF91_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944135.1"
                     /translation="MMAKFRIQYSAGFGHYTQNHKGFGPTIYIEEVVEFDNGKDYFDY
                     IDFYKTYSKSDDTYFHISFLEDRPLSDKEIIIRNEYRKMRDENCKKAKEEFIANNELD
                     IEHLPTHHD"
     gene            3382..3759
                     /locus_tag="RTF91_001257"
     CDS             3382..3759
                     /locus_tag="RTF91_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944136.1"
                     /translation="MQVNYRMISSYEYDAISGQYKQVGKQVEDYSSSGDSDFMDMLNK
                     VDEKSSKDALNSTSSFQSNTQNSNLSNYAQMSNIYAYRFRQDESELSMRAKSASVHND
                     LTQQGVNEQNKNNTLLNDLLNAI"
     gene            complement(3801..4385)
                     /locus_tag="RTF91_001258"
     CDS             complement(3801..4385)
                     /locus_tag="RTF91_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDZ4944137.1"
                     /translation="MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAV
                     HFVYAYRVLNDFNQIVEDKSDDGEPKGTSGMPTLNVLRGYDLINAALITVRYFGGIKL
                     GTGGLIKAYSDAANTVINNSVLLSFEFKKSITIAIELKNLNRFEHFLKTHFFVFAKDF
                     KNCKAILHIKLNEKEEQEFEIFCKNFAPFEIEKL"
     gene            4455..5099
                     /locus_tag="RTF91_001259"
     CDS             4455..5099
                     /locus_tag="RTF91_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002921842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HDZ4944138.1"
                     /translation="MPKKNQKISSDRIYDFIIKSIKDGKLKPNDRVKEQDLVEQTGLS
                     RTPIREALGLLQNDGILVQDGKNGLIVAGLDLISITKLYEIRELLEGEAAKLAALHAS
                     MAEIEILVNILKVQKNIKELNELRASNILFHQTLYRCSGNHYLFKIMENLDRSLLLLG
                     DSTLAKENRPKEAYEEHLAVVNAIKERNAIEAERLAKFHIQQAYKIRLDNILKK"
     gene            5301..6588
                     /locus_tag="RTF91_001260"
                     /pseudo
     CDS             5301..6588
                     /locus_tag="RTF91_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813348.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            6596..7996
                     /gene="tcuA"
                     /locus_tag="RTF91_001261"
     CDS             6596..7996
                     /gene="tcuA"
                     /locus_tag="RTF91_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HDZ4944139.1"
                     /translation="MEFDIVVIGGGNAALCAAIAAASKKENIKIALLESSPKEWRGGN
                     SQHTRNLRSMHDEPTDILTQSYSEDEFFEDVFKVTKGQTNEEYARFVISRTPKAVEFA
                     KKYGVRFQPSMRGTLHLGRTNAFFLGGGKSLVNAYFNAAKNLRVEIFYEFEALDLMVE
                     NGCCKEILVLDKKQNQEVKIKTKAVIVASGGFESNLEWLEEAWGQRAKNFIIRGTRFN
                     QGKMLKALEKNHAQIIGDPTQGHMVAIDARTPKYDGGIASRVDCVSLGIVVNKKAQRF
                     YDEGEDFWPKRYAIWGRLVANEEDQIAYSITDSKVQKCYMPSLFEPIVANSIEELASK
                     MNLDPKALKMTLDEYNQSVIEGEFDHTIQDNCHTQGLKIEKTHWALKIDTPPFYCYPL
                     RPGVTFTYMGVKVDKNARVYQENGELFKNIFAAGEIMAGNILTQGYVAGFGMSIGSVF
                     GRLAGENALELVKDIK"
     gene            7993..9059
                     /gene="tcuB"
                     /locus_tag="RTF91_001262"
                     /pseudo
     CDS             7993..9059
                     /gene="tcuB"
                     /locus_tag="RTF91_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813344.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tricarballylate utilization 4Fe-4S protein TcuB"
     gene            9511..10737
                     /locus_tag="RTF91_001263"
     CDS             9511..10737
                     /locus_tag="RTF91_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944140.1"
                     /translation="MEKIKNYKLIIILLSLDLLALLYGISTLSISADESDIYFGEQGK
                     SFIFSHSLLYYISHFGTFIFGQNDFGLRLPFLFFHFLSCLLLYLLALKYTKTKIDAFF
                     SLLLFVLLPGTVASALLVNAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFN
                     ILFLTFFFFGIYKRNAILFTLSLVLFGASISFYGFDMGGRPRGYFLDTLGIFAACFSP
                     LVFVYFFYTIYRLTFQKYKNLLWFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLL
                     IKTLMQSYRVRLPVFRLRYKIFIECSIIFLIFCYFLIVANQLLYYFISNPNRHFANNY
                     HFAKELALELKKQDVLELTTAPSLQKRLRFYGIKNSNKFYLKALKQADKYDMDKKIIK
                     VKLGKYEKVYQILNYD"
     gene            10730..>11461
                     /locus_tag="RTF91_001264"
     CDS             10730..>11461
                     /locus_tag="RTF91_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ4944141.1"
                     /translation="MIKAFSLLEFVFIILILGIVFNLGSLYLKKDNLLEGAIQILNDI
                     QYTQSLAMMQEGIRVDELAIAKREWFKSKWQIYFIKSAATGYDQTYTIFLDKNGDGNA
                     NLGKTEINIDREIAVDVINHNKLMNSGQSGVISKDHEKTTQRFNITKRFGIEKVEFKG
                     ACSGFTRLVFDEMGRVYSPLKNAKHAYEKTLAKNNSDCIIRLSSKKHALCIVVDTLSG
                     YTYIPEFKTLKSQFVNIKNKNYECSK"
BASE COUNT         3820 a         1371 c         2083 g         4187 t
ORIGIN      
        1 attatcaaat ccttgatttt aataaaagtg ataaattgta tagaaaaaag cttaaaagtc
       61 ggttttattt aaatttggcg atttcatctt gtatggtttt tctatatgaa gtaatttttc
      121 gtgagttttt tgctattttc taaaagttaa agccaagcat aacaatgcga tataaattag
      181 gtttatattt tctccaatta tataaagtac tagcatcaat atctagttcg tatgccatat
      241 cgcgtttgct ttttttgcca ttttatacct taaaaattta tcttttagtg aaaattttac
      301 attaaagatt ctttattaaa aaaacttgaa atattcaatt ttttatataa aatatattta
      361 ctatttgaat attaattaaa ttgcaatgcg gaataattcg agatattttt taattttcaa
      421 ggagaagttt atggatttca attcggttct tttcagtatt ggtgatagat tgccaaaaga
      481 tccaatatct actgtgatat tagaagagaa atttgatcgt ttaagcgaag ataagcaaaa
      541 agaggtggta gccagcttta gtgttttggg tagggacttt ttgcttggtg aatttggagt
      601 agggcgtttt atgataggga tttgtgcgtt tagagattac aattatagat atgtttttag
      661 cgggtaaaaa attaagaaaa caaaattttg aaaaagttaa cttaattata gatgagataa
      721 aatcttagca ttgttattta gaaaggaaaa tattcttaat cttaacagta gttatattta
      781 ttaaggagat gaagtgagtg aaaaatacgc accttttgaa acaaaaccta ttttgcttta
      841 tgagaaagat acttttaaaa ttgttgaaaa gcatatacaa gtaaagatga aaaattttgt
      901 ataggtttaa aatcaaatgg ttttctaaat aaattcttat cttaatattt ccaccatagc
      961 ttggttttga tttattgaga aatctcttag gtcaagatgg tgctaaaaat gataaaatca
     1021 tacaatttat taaaacaata atggagaaat aatgaaaaat attttattaa gcttaatgtt
     1081 ggttttgtta tcgggatact ttaatgataa gccaaaatgc gatgatgatg aatgggttta
     1141 tctcgagtac ggcttaaatg agcagtcttt aaggccacat tttaaatttt gcttgattta
     1201 aaagattatg ttaatgaagt ggtttatact tcttttgaaa gttttataac taaagatagc
     1261 aatgataaaa aacaagtttt tgtagaactt ttggattatt agtttatttt cattgtctat
     1321 tgaaatttat actcaattaa tttcaagtct ttttttgcta caatttatta aaaattttta
     1381 taagtaaaaa atttaaggaa aatcatggtt gaagtaaaaa atcttactat gcgttttgca
     1441 aatcagcttt tatttgaaaa tgttaattta aaacttgttc gaggacaaag atacggactt
     1501 attggtgcta atggtgcggg aaaatcgact tttttgaaaa ttctttcagg agaaattgag
     1561 tcaagtagtg gtgaaatagt atttgatgaa ggcttgaaaa tcgcagtttt aggacaggat
     1621 caatttgctt ttgaaaacta caccatcaaa gatgcagtga tgtgtgcaaa taagcgttta
     1681 tatgaggcct taaaagaaaa agaaaagctt tatatgagcg aggaatttac tgatgagatc
     1741 aatgaacgct taggtgagct tgagataata acggccgaag aagatccaaa ttatgattgt
     1801 gaaacacgtt gtgaaaaaat tttaagttct ttaaagatta aagattttga tgctttaatg
     1861 agcaccttgc aaagtgcgga taaatttaaa gttttgttag ctcaagtttt gtttttgggt
     1921 gcggatgtgc tttttttaga tgagcctaca aacaaccttg atttagaggc gatttcttgg
     1981 cttgaaaatg aacttttaag acatgaagga actttagttg tcatctctca cgatagacat
     2041 tttttaaata aaatttgcac aagaatttta gatgtggatt ttaaacaaat tcgtgatttt
     2101 gcgggaaatt acgatgattg gtatatggct tcaacgcttt tggcaaaaca agctgagctt
     2161 aaacgcgata aaaccttaaa agaaagagaa gaattagaaa atttcattcg ccgttttagc
     2221 gcaaatgctt ctaaggcaaa acaagccaca agccgtgcta aggcgcttga aaaactagag
     2281 cttgaagaga ttaaaatttc aagccgtaga gatcctagta tagtgtttag aaccaatcgt
     2341 gagataggca atgaagtttt agaatttaaa ggtattagca aggcttatga taaacaattg
     2401 ttttcaaact tggagctaaa aatagaaaaa aatgataaaa tcgctttgat tggggcaaat
     2461 ggtgtgggca aaagtacttt ggcaaaaatc atcgcccatg ctataagtcc agatagtgga
     2521 tctatacatc ttggggcaac tatagagctt ggatattttc ctcaagatac aagtaattta
     2581 atttgtgaaa atttgaaact ttatgaatgg ctgatgagtg aaaaatttaa agatctagat
     2641 gaaatccgca agtgtttagg tagaatgctt tttagtggca gcgatcaaga aaaaatggca
     2701 gcaagtttaa gtgggggtga aaaacatcgt ttaatgcttt ctcgtttaat gctagagcgt
     2761 ccgaatttct tgcttttaga cgaacctgat aaccatttag atcttgaaag tattattgca
     2821 ttaggtgaag ctttgtataa tttcaaaggt gtagtgcttt gtatcagcca cgatagagag
     2881 ttagtttctg cttttgctaa tagaatttgg tgtttgaaaa atggtaagct tacagatttt
     2941 cgtggaactt atcaagaatt tttaggagaa aatgatggct aaatttagaa ttcaatacag
     3001 cgcaggtttt ggacactata cacaaaatca taaaggtttt ggacctacga tttacataga
     3061 agaagtggtg gaatttgata atggcaagga ctattttgac tatatagatt tttataaaac
     3121 ttattcaaaa agtgatgaca cttattttca tattagtttt ttagaagata ggcctttaag
     3181 cgataaagaa attattattc gcaatgaata ccgaaaaatg cgtgatgaaa actgtaaaaa
     3241 agccaaggaa gaatttatag ctaacaatga gcttgatata gagcatttgc ctactcatca
     3301 tgattgaaaa acattaattt tacacaaaaa aggaacactt tttgcttgta tagtttttac
     3361 atattttgaa aggagaaaac tatgcaggta aattatagaa tgattagctc gtatgaatac
     3421 gatgctatta gtggtcagta taaacaggtc ggtaaacagg ttgaagacta ttcttcatct
     3481 ggagattctg attttatgga tatgttaaat aaggtggatg agaagtcaag taaagatgct
     3541 ttaaattcta ctagtagttt tcaaagtaat acacaaaatt caaacttaag caattatgct
     3601 caaatgtcaa atatttatgc ttatcgtttt agacaagatg agagtgaatt gtctatgaga
     3661 gctaaaagtg ctagcgttca taatgatctt acacaacaag gtgtaaatga acaaaacaag
     3721 aataatactt tgctaaatga tttgttgaat gcaatttaat caaaagctcc attttggagc
     3781 ttttatatgc ttgcaagaat ttataatttc tctatttcaa aaggtgcaaa atttttacaa
     3841 aaaatttcaa attcttgctc ctctttttcg tttaatttga tatgtaatat agctttgcaa
     3901 tttttaaaat cttttgcgaa aacaaaaaag tgggttttta aaaaatgttc aaaacgattt
     3961 aaatttttta attcaatagc aatagttatg ctttttttaa attcaaatga aagtaaaaca
     4021 gaattgttaa tcacagtatt tgccgcatca ctataagctt ttataagtcc tcctgtacca
     4081 agttttatac cgccaaaata tcttacagtg attaaagccg cattgataag atcatagccc
     4141 cttagaacgt ttaaagttgg cattccagaa gttcctttag gctctccatc atcgctttta
     4201 tcttctacaa tttgattaaa atcatttaaa acacgataag catagacaaa atgaacggct
     4261 tttggatgct ctttttttag cgtttctatt aaaaatttaa aatctttaaa agggcaaaga
     4321 aaagataaga aagtagattt tttaatatcg atttgtgttt gaaaaatttg atcaatagtt
     4381 tgcatttttg cctttttttg tttaaaatta tacttataaa aactaaaatc aatttgagtc
     4441 ttaggggtta taatatgcca aaaaaaaatc aaaaaatttc gagtgataga atttatgatt
     4501 ttattatcaa atctattaaa gatggaaaat taaaacctaa tgatagagtt aaagaacaag
     4561 atttggtaga acaaacagga cttagcagaa ctcccataag agaagctttg ggattgttgc
     4621 aaaatgatgg aattttggtg caagatggta aaaatggact tattgttgca ggacttgatt
     4681 tgatttctat tacgaagctt tatgagatca gagaattgtt agagggtgaa gctgctaaac
     4741 ttgcggcatt acacgcttct atggccgaaa ttgaaatttt ggttaatatt ttaaaagttc
     4801 agaaaaatat taaagagctt aatgaactta gggctagtaa tattttattt catcagactt
     4861 tgtatcgttg ctcaggaaat cattatcttt ttaaaattat ggaaaatttg gatcgttctt
     4921 tattgcttct tggtgatagt actttagcca aggaaaatcg tcctaaagaa gcttacgagg
     4981 agcatttagc tgttgttaat gctattaaag agagaaatgc tatagaggca gaaagattag
     5041 caaaatttca tattcaacaa gcttataaaa ttcgtttaga taatatactt aaaaaataat
     5101 ttactattct taatttttaa atctactaat taaaaataca cagatattaa cacttgcaat
     5161 ccaaataaaa aatattaatt ttttatttca actttctgtg tagttttgta acttaaaaaa
     5221 tacttttgaa tacaaaaaaa tattttagga ccaaaaaatt cctaaaacta gtttataatg
     5281 aaaataaaaa aggaggctat atggcaagaa ggtccaaggg tgatgctaaa accattttta
     5341 gcgttgctag tggtaatttt ttagaaatgt atgattttgc ggtttatggt ttttatgctg
     5401 catttattgc taaagtgttt tttcctgctc aaagcgaatt tatttctttg atgcaaagtt
     5461 ttatggcttt tggagttggc tttttgatgc gtcctatcgg agctatagtt cttggatctt
     5521 atatggataa gcatggtaga aagaaaggtc ttgttgtaac tttaggtatc atggcttttg
     5581 gaactttaac catagcctgt tgtcctggtt atgaaagtat aggaatttta gcacctatta
     5641 ttgtggtaat tggaaggctt ttgcaaggtt ttagtgctgg agctgaaata ggtggagcaa
     5701 gtatttattt agcagaaatt gcaccaaaaa acttacgcgg tttttatgtt tcttggcaaa
     5761 gtggatctca gcaaattgct accgtatttg cgggtgcttt gggtgtactt ttacattatc
     5821 ttataggtga tgctattatg caagcttggg gctggagaat cccttttatc gttggatgtt
     5881 tagttgtgcc ttatattttt tatataagaa gaactttaga tgaaacacct gaatttaaag
     5941 caaaaattca ccaagctcca aaaacctttg gagctatttt caaaagcatt agagaaaata
     6001 tacctatagt gatttttgga atcatgtttg taatgatgac gacagtaact ttttatttta
     6061 tcacttctta cactccaact tttgccaata aagttttgca ttttagtaaa ttagaaagct
     6121 ttatgattac tgctattata ggacttagca atactttttg gttgccattt tctggtttta
     6181 ttggagataa aataggaaga aagcctattt tattaaccat gactttttta ggtgttgtca
     6241 gtgcttatcc tatgttaaat tttttaacaa ataatatttc ttttgccaat ttggttttag
     6301 tggaattatg gtttagtttt atttttggtg cttataatgg ggctatggtg gtttctttat
     6361 cagaaatcat gcctaaaaat gcaaaagctt tgggtttttc tttttcttat tctatagcgg
     6421 tggcaatttt tggaggattt acccctgctg tttcaactta atttgataga aaaaactagc
     6481 aatcctgcct ctcctgcatt ttggcttacc tttgcagcca tttgttcttt tgtggcttct
     6541 ttgattattt ttaaaaaagg tggaatttat gaaagacaac aaaaatgaga atgaaatgga
     6601 atttgatata gtggttatag gcgggggcaa tgcagctctt tgtgcagcta tagcagcagc
     6661 tagtaaaaaa gaaaatataa aaatagcact tttagaaagc tctccaaaag aatggagagg
     6721 aggaaattct caacacacta gaaatttgcg ctctatgcat gatgagccta cggatatctt
     6781 gactcaaagt tatagcgagg atgagttttt tgaagatgtt tttaaggtga ctaagggaca
     6841 aaccaatgaa gaatacgctc gttttgtcat ttctcgtact ccaaaggcgg tagagtttgc
     6901 taaaaaatat ggagtgcgtt ttcaaccttc catgcgagga actttgcact taggacgcac
     6961 aaatgctttt ttcttagggg gcggaaaatc tttagtcaat gcttatttta atgcggcaaa
     7021 aaatttaagg gttgaaattt tttatgaatt tgaagctttg gatttgatgg tagaaaatgg
     7081 atgctgtaag gaaattttgg ttttggataa aaaacaaaat caagaagtga aaattaaaac
     7141 caaggctgtg atcgttgcaa gcgggggatt tgagtcaaat ttggaatggc ttgaagaagc
     7201 ttggggacaa agggctaaaa attttatcat ccgtggaact cgttttaatc aaggtaagat
     7261 gctaaaggct ttagagaaaa atcatgcaca aattataggc gatcccactc aagggcatat
     7321 ggttgctatt gatgcaagaa ctccaaaata tgatggaggc atagcttcaa gggtggattg
     7381 tgtatctttg ggtatagtgg taaataaaaa ggcacaaaga ttttatgatg agggtgagga
     7441 tttttggcca aagcgttatg caatttgggg gcgtttggta gcaaatgaag aggatcaaat
     7501 cgcttattct atcactgatt ctaaggtgca aaaatgttac atgccttcac tttttgaacc
     7561 catagtggcc aattctattg aagaattagc ctctaaaatg aacttagatc caaaggcttt
     7621 aaagatgact ttagatgaat ataatcaaag tgttatagaa ggagaatttg atcacactat
     7681 acaggataat tgtcacactc aaggtttaaa gatagaaaaa acgcattggg ctttgaaaat
     7741 agatactcca cctttttatt gctatccttt gcgtccaggt gtgactttta cctacatggg
     7801 tgtgaaggtg gataaaaatg caagggtgta tcaagaaaat ggagaacttt ttaaaaatat
     7861 atttgcagct ggtgaaatca tggcgggaaa tattttaacc caaggctatg ttgcaggctt
     7921 tggtatgagt ataggaagcg tttttgggcg tttggctgga gaaaatgccc ttgagttagt
     7981 aaaggatata aaatgaaaat tacaaaaatt tatgaagaag cacaaaaatc ttgcattata
     8041 tgcaattctt gtcgttattg cgaggggctt tgtgcagtat ttccagctat ggaaaaaaac
     8101 gtgaattttc tttaaaggat atggattatt tggctaattt atgccatcaa tgttctgaat
     8161 gtttttatga ttgccaatac gccccaccac atgaatttaa tgttttgatt cctaaacaat
     8221 ttgcagctct taggcaatac agttatgaaa aatacgcttt tcctaatttt ttaggcttag
     8281 cctttaggaa aaatgcggtt ttaaccagta tagttttaat cctttgttta ttttttggat
     8341 tttggagtgc gagtgcttac gagggtgaaa atgttaaagg ggattttttt gctattgttt
     8401 cttatgatta tatggtaagt atttttggta cggtttcact tttggtgctt ttagcctttg
     8461 tgggcagtgt ggcaaaattc tatcatgcta tagaaataaa aaatctcaat cttgctgttt
     8521 tcgtaaaaag tctaaaagac gctttaagcc ttaaatatct aggcggacat aaaaatgagg
     8581 gttgtattta tcctaatgaa aagcgttcta atataagaaa aatatttcat cattttactg
     8641 cttatggttt tttattttgt tttatagcga cttctttagg ggctttttat catcactttt
     8701 taaatttagt agccccttat gattttaccc aacttcctaa aatttttgga agcttaggag
     8761 ggattatgct ttgcatagga actttgggac tttttgtttt aaaaagcgta gcggataaaa
     8821 acatagtaga tagtcaaagt atgggcatgg attatgtttt tattttcatg ctttttttag
     8881 taagttttac aaggctttta ctcatgcttt taaagcaaag ttcttttttg ccctatatgc
     8941 tttggtttca tttaagttgt gttttggctt tttttattat gatgccttat tctaaatttg
     9001 tgcatatgtt ttatcgcttt gtcgcacttt taaaatacaa tagcgaggaa gaaatatgat
     9061 ataataatgc ctgcgtttta aggcattatt taaattattt taaaaacaaa attatttttt
     9121 tataaaacca aaatctttta ttgataaatt tatgattatc tttgataaga taaagaaatt
     9181 caagcgaaag tgttcgtgca tataaaaaag ttagcacaaa gaattaagat taagatatgg
     9241 agaattactt caagatatga gttaaacaga tggagatttg cttatttata agataaatag
     9301 tattttttgg tagttagtat tgctttattt ttcttatcct attttaagat atagtaaata
     9361 ctcgtattta tttttctatt gtatttttgt ttgccttgac tggcttaaaa tttttcagta
     9421 tttattagta tttgattttt tatcatttga cttgcttttt aatatttatt ttggttgata
     9481 ttttaagttt aattttgtaa aattttcatt atggaaaaaa tcaaaaatta taaacttatc
     9541 atcattttac ttagtcttga tttgttggct ttactttatg gaatttcaac actgagtatt
     9601 agtgctgatg aatctgatat ttattttggt gagcagggta aatcatttat tttttctcat
     9661 agtttgcttt attatatatc tcattttgga acttttattt ttgggcaaaa tgattttggt
     9721 ttaaggcttc cttttttatt ttttcatttt ttaagttgtt tgcttttgta tttgctagct
     9781 ttaaaatata ctaaaactaa aatcgatgct tttttttctt tattgttatt tgttttattg
     9841 ccgggtactg ttgcaagtgc tttactggtt aatgccgcat ctttggtgat ttttttaacc
     9901 cttgctatat tatgtgctta cgaatatgaa aaaaaatggc ttttttatat attattgatt
     9961 atagtgttat ttgttgataa atcttttaat attttatttt taactttttt cttttttggg
    10021 atttataaaa gaaatgctat tttatttacc ttatctcttg ttttgtttgg agcgagtatc
    10081 agtttttatg gttttgatat gggtggacgt ccaagaggtt attttttaga tactttagga
    10141 atttttgctg catgtttttc tcctttggtt tttgtgtatt ttttttatac aatttaccgt
    10201 ttgacttttc agaaatataa aaatttatta tggtttttaa tgagtgtaac atttgtattt
    10261 tgtttgttgc tttctttaag acaaaaactt tttttagatg attttttgcc tttttgtgtt
    10321 atttgcactc ctttgcttat aaaaacttta atgcaaagtt atagggtgag attaccagtt
    10381 tttcgattaa ggtataaaat ctttatagaa tgttctataa tttttttgat attttgttat
    10441 tttttaatcg tagctaatca attactgtat tattttataa gcaatccaaa tcgtcatttt
    10501 gctaataatt atcattttgc taaagaattg gcgctagaat taaaaaaaca agatgtttta
    10561 gagcttacaa cagctccaag tttgcaaaaa agattgcgat tttatggaat aaaaaatagc
    10621 aataagtttt atttaaaagc tttaaaacaa gctgataagt atgatatgga caaaaaaatt
    10681 attaaagtaa aacttggaaa atatgaaaaa gtatatcaga ttttaaacta tgattaaagc
    10741 tttcagtttg ttagaatttg tgtttataat tctcatttta ggtatagttt ttaatttagg
    10801 cagtctttac ttaaaaaaag acaatctact agaaggcgca atacaaattc ttaatgatat
    10861 ccaatatacc caaagtttag ccatgatgca agaaggtata agagttgatg agttggctat
    10921 cgcaaaaaga gagtggttta aaagtaagtg gcagatttat tttataaaat cagctgctac
    10981 aggttatgat caaacatata ctattttttt agataaaaat ggggatggaa atgctaattt
    11041 aggcaaaact gaaatcaata tagatagaga aattgctgtt gatgtaatca atcacaacaa
    11101 attaatgaac tcaggtcaaa gtggagttat tagcaaagat catgaaaaaa ctacacaaag
    11161 atttaatatc acaaaaagat ttggcataga aaaagttgaa tttaaaggag cttgctcggg
    11221 atttactaga ttagtatttg atgaaatggg cagagtgtat tccccattaa aaaacgctaa
    11281 gcatgcttat gaaaaaactt tggcaaaaaa taattcagat tgtattatac gcttgtcatc
    11341 aaagaagcat gctctttgta ttgttgtaga tacccttagt gggtatactt atattccaga
    11401 atttaaaaca cttaaaagtc aatttgttaa tataaaaaat aaaaattatg agtgttctaa
    11461 a
//
LOCUS       DAPWAA010000048        11410 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.048, whole genome shotgun sequence.
ACCESSION   DAPWAA010000048 DAPWAA010000000
VERSION     DAPWAA010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11410
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.048"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(29..103)
                     /locus_tag="RTF91_001265"
     tRNA            complement(29..103)
                     /locus_tag="RTF91_001265"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(69..71),aa:Asn,seq:gtt)
     gene            complement(192..1436)
                     /locus_tag="RTF91_001266"
     CDS             complement(192..1436)
                     /locus_tag="RTF91_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDZ4944142.1"
                     /translation="MKSSIFYTITFIFIFAGVSVILGFLWLIEYDQQNYTRELNTKYS
                     LIANARLLNFAGVISEKEFGEQTKNYNKMDEITEVKQIRKILFRGDVLARVEVNNGLI
                     EIISYNRQVYLNIIYNGKVYLYKDQDYQTYRYFIIKAIAVAVICILVLLYIYIFKKLK
                     PLKRLKKQIDKFAQGKLNDIEDVSIGVDEISQVSEAFYQAIVQIRKLNQSRQFFLRNI
                     MHELKTPITKGLLTLEMIEDNKYKERLNGVFTRLEILINEFAAIEQITSGAAFINRKK
                     YNILDVLDEAKEIAMRDDSNIRIFMEESFFVNVDFKLFTTAIKNMIDNGIKHSEDGFI
                     QIDIIDDYICFKNRGPELNDTLEYYTQAFTQGSKQKSSFGLGLYIVNTILETHGMKLD
                     YLYENGVNLFYFRNLKSIIVKE"
     gene            complement(1433..2107)
                     /locus_tag="RTF91_001267"
     CDS             complement(1433..2107)
                     /locus_tag="RTF91_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDZ4944143.1"
                     /translation="MTNILMIEDDLELAEITAEYLEKFDMKVDIAHEPYIGLSKLALK
                     EYQLIILDLSLPGLDGLEVCEEIRKKYDTPIIISSARHDITDKVNALELGADDYLPKP
                     YNPKELQARIKSHLRRISNTKSAIAKSVKDLVYDQYKHIITMKGQELTLTNAEFDILS
                     YLIKKEGGVVSREELVYNCSSISEDSSNKSIDVIISRIRQKMGDDPKTPKYIHSIRGI
                     GYKLTQ"
     gene            complement(2183..3601)
                     /gene="htrA"
                     /locus_tag="RTF91_001268"
     CDS             complement(2183..3601)
                     /gene="htrA"
                     /locus_tag="RTF91_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease HtrA"
                     /protein_id="HDZ4944144.1"
                     /translation="MKKVFLSLSLASALFAASINFNESTTTTNRTTPAVGDAVLSYHD
                     SIKDAKKSVVNISTSKTITRVNRPSPLDDFFNDPYFKQFFDFDFPQRKGKNDKEVVSS
                     LGSGVIISKDGYIVTNNHVIDDADVIMVNLPGSDTEYKAKLIGKDPKTDLAVIKIEAN
                     NLSAIIFTNSDDLMEGDVVFALGNPFGVGFSVTSGIISALNKDNIGLNQYENFIQTDA
                     SINPGNSGGALVDSRGYLVGINSAILSRGGGNNGIGFAIPSNMVKDIAKKLIEKGKID
                     RGFLGVTISALQGDTKKAYKNQEGALITDVQKGSSADEAGLKRGDLVTKVNDKVIKSP
                     IDLKNYIGTLEIGQKISLNYERDGENKQTNFTLKGEKENAKGVQSDLIDGLSLRNLDP
                     RLKDRLQIPKDVNGVLVDSVKQKSKGKNSGFQEGDIIIGVGQSEIKNLKDLEQALKQV
                     NKKEFTKVWVYRNGFATLLVLK"
     gene            3806..4699
                     /locus_tag="RTF91_001269"
     CDS             3806..4699
                     /locus_tag="RTF91_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family protein"
                     /protein_id="HDZ4944145.1"
                     /translation="MNSLYETLGVNKNASADEIKKAYRRLARKYHPDINKEKGAEEKF
                     KEINAAYEILSDEKKRAQYDQYGDSMFGGQSFHDFSRNTGGVNLDDILKDLFGGGFGG
                     RSRSSFNGFSSKGFSTGFGGFGGFEEENLDSNLELHIPFEKAVKGGEHSFNFQGETIK
                     FKIPHGIKEGEKLRIRSKGKQSRNGTRGDLIIIVKIEESSIYTREDDDLYQKVDISLK
                     TALFGGKINIKTLKEGKEEATINITPNSKNNQKIRLKGYGVQNRKNDIYGDMYLILNV
                     ILPNLDTLDEKFIELLKEKLP"
     gene            4714..5088
                     /gene="hspR"
                     /locus_tag="RTF91_001270"
     CDS             4714..5088
                     /gene="hspR"
                     /locus_tag="RTF91_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock transcriptional regulator HspR"
                     /protein_id="HDZ4944146.1"
                     /translation="MEHHYDEPVYLISVVAKVLSIHPQTLRQYEREGLIEPSRTDGKI
                     RLYSQRDIDRIKLILRLTRDMGINLAGVDVILKLKNQLHEFENLIDELRLELSKQKDK
                     EAASKAIVKHKNSFDLIFYEKK"
     gene            5095..6720
                     /locus_tag="RTF91_001271"
     CDS             5095..6720
                     /locus_tag="RTF91_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDZ4944147.1"
                     /translation="MNNFLEIFLITVAIAIVLNVIFKKFEIPTIIGYIAAGEIISEIY
                     HLSGEGEITHIAEFGIVFLMFTIGLEFSFKHLMAMKQEVFLNGSLQMLTCGFIFMLLA
                     IGILGLGDKSATIVGFALALSSTAVVLKILNDNGDINEQYGRKALGILLFQDIAVIPL
                     LLLVDIFSSNNQNIEKLLFTTLISALILITLLFFIGKYLVDRIFRLIIHTSSQEIFIS
                     TVLFMVIGASFLANYFGFSYSLGAFIAGALIAETKYKHKIEADLIPFRDLLLGLFFIT
                     VGMQIQLDVVAQNWFLIIVLTLVVMALKFGIVFGFLFLYTKKRVALKTAFAIAQIGEF
                     ALAIFSLLQAKNMLDIKTSQILIVVSILTMIITPFILNNIRKITNVVEDITLNTNTVQ
                     NIDNNIKLKNHLVVFGYGRLGQEVVQKIKNTGVPYLVLESDLNLVELGVSRGENVVFA
                     NAAQEETLKIANIEECAVAIITVTNEAKLEILCQILANYPKPIDTIIHVNGTLKKMLF
                     SSIDENIHIIRSEKVIARNLVQEALECRIHKNT"
     gene            6730..7062
                     /locus_tag="RTF91_001272"
     CDS             6730..7062
                     /locus_tag="RTF91_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944148.1"
                     /translation="MTKNEEKSLRVKYLRNLEKFFNGAMCALKKEDFDKAKFEERMLK
                     NAKFFEKNPAVSLNSSYAKNLEIFVNACLDFSKEKNELLNLANALDKQKKQGEKKEKH
                     KNYLKDYE"
     gene            7059..7679
                     /locus_tag="RTF91_001273"
     CDS             7059..7679
                     /locus_tag="RTF91_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDZ4944149.1"
                     /translation="MINVFFDIDGTLIDSANAISCAVNEIRQDLNLVPLTREIIMQTI
                     NTPNIDWAKELYNIENFHHSSFKEGYEKYFVKHYEQSVVLFEGVKELLEFLKSKNCFL
                     AIATNAPQSSLSSILKKHEIIPYFDKILGVSLGIKPKPHPMMLELLKNEAPYEISIFI
                     GDSQKDKECAKNANLSYFHAKWYQKDLKENEFSSTNELKGFLQKYL"
     gene            7735..9729
                     /locus_tag="RTF91_001274"
     CDS             7735..9729
                     /locus_tag="RTF91_001274"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDZ4944150.1"
                     /translation="MSELLIEIGTEELPAIPLLKELANIEKKWKNVLEEYRLLSDFNF
                     YYTPRRLVFFHKNFANKQEDSFAEFIGAPKNVAYKNGNLTPAGQSFLQKAGISENELT
                     FKEIKGKEVLYHQKAIKGLQSQEILGEMIDKFLKSLNFGKSMRWGANSFEFIRAIRSI
                     VCILNDELVNFQSYGVKSAKKTFIHRNISYDLQDFNNAKEYFQLLEKNYIILDPLQRK
                     ERILEQFKLIENQENIRIGEDEELLAEVVAITEYPNALLGSFEEKFLEIPSEVIITSM
                     RENQRYFAVFNDKSLSNHFIVVSNAVCKDYSKIIHGNERVLRARLSDAMFFYQNDLQS
                     GLKPEKLAKMIYLEGLGTMQDKSLREIKIAEILCQIFHNDKIENISTALKYAKADLAT
                     QMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEFSSIVALANK
                     LDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLSSYYKSFD
                     MQILKDFIFERLYTFYTVNASFVKSVLSSKNTDLIHINQSVHALIKLSKKDNFHENFT
                     TFKRLANIANKTLHKVDPTLFAQEIENKLYKAFQEKTKADSLQEKLENLFALKPFIDE
                     FFDQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKELSL"
     gene            9726..10547
                     /locus_tag="RTF91_001275"
     CDS             9726..10547
                     /locus_tag="RTF91_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDZ4944151.1"
                     /translation="MKALWLFLSLTLWLFGAKNLELVKGQALFLELDKKDFLSLKNND
                     KNIPTFAHPKNQEKILAIFSLPYKNPPQNTKLIAFYKDKKEEILIKTLEGNYQSEKIQ
                     VENKKIFPPKAVQERIAKELKEVNVIYSSYTPKALFNGTFNMPLNSFITSDFGKARTF
                     NEKVASYHSGTDFRATIGTPIYAANSGIVKIAKDRYFAGNSVIIDHGFGIYSQYYHLS
                     KIKVKRGQKIKKGELLGLSGATGRVSGPHLHFGILAGGKQVDPLDFVSKFNTIFQ"
     gene            10544..>11410
                     /locus_tag="RTF91_001276"
     CDS             10544..>11410
                     /locus_tag="RTF91_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDZ4944152.1"
                     /translation="MKFSIFFHTWLYENYYKNAVNIGKNGDFFTAVSVGNLFGTLLAQ
                     HFLNLVDKKILKLPLELVEIGANEGYLSRDFLAALLELRPQIFSQISFFIIEPHEKLR
                     TLQKKTLEGVEFTHKNSLKECHFKNAFFFCNELFDSFTCELIDDNKMAFVENFKLVFK
                     NMDENLIAKCKTLNLKKGELSLELEDFFKDLNQACDQFIFAGFDYGIFNPQKFSLRIY
                     QKHEVFNPFEISLKDFFGKSDLTYNINFTQVQNLIKEFDFKLLAFKKQSFALMDFGFE
                     KLLEHAKKKNIKT"
BASE COUNT         4191 a         1716 c         1647 g         3856 t
ORIGIN      
        1 atagatatta aaaatggagt taaaaaagtg gctccggatg taggattcga acctacgacc
       61 aatcggttaa cagccgacta ctctaccgct gagctaatcc ggaatattta aaaataaaat
      121 gtgattatag tgaaattaaa aaactttgtc aaggtttttt ttataaaaat atatttttta
      181 caaaaaatta attattcctt gacaataatg ctttttaaat ttctaaaata aaacaaattt
      241 accccatttt catataaata atcaagcttc attccatgcg tttctaaaat agtatttaca
      301 atgtaaagcc ctaatccaaa acttgatttt tgttttgatc cttgagtaaa agcttgagta
      361 tagtattcta aagtatcatt caactcaggg ccacgatttt taaaacaaat ataatcgtct
      421 ataatatcaa tttgaataaa tccatcttca gaatgtttaa taccattatc tatcatattt
      481 ttaatagctg tagtaaaaag tttaaaatct acatttacaa aaaaactttc ttccataaaa
      541 atacgtatat tactatcatc tcgcattgca atttctttag cttcatctaa aacatctaaa
      601 atattatatt tttttctatt tataaaagct gcacctgaag tgatttgctc aattgcagca
      661 aattcattaa ttaaaatttc aagtctagta aaaaccccat ttaaacgctc tttatattta
      721 ttatcttcta tcatttctaa agttaagaga ccttttgtaa taggcgtttt aagttcgtgc
      781 ataatatttc ttaagaaaaa ctggcgagat tggttaagct ttcgaatttg aacaatggct
      841 tgataaaaag cttcacttac ttgtgaaatt tcatccactc ctatgcttac atcttctata
      901 tcattaagct ttccttgtgc aaatttatca atttgtttct taagtctttt aagaggtttt
      961 aattttttaa atatataaat ataaagcagt acaagaatac aaatcacagc tacggctata
     1021 gctttgataa taaaatacct ataagtttga taatcttgat ctttataaag ataaaccttt
     1081 ccattataaa taatatttaa atatacttgt ctattataag aaataatctc tattaagcca
     1141 ttattaacct caactctagc caaaacatca cctctaaaaa gaattttacg aatctgtttt
     1201 acttctgtta tttcatccat tttattataa ttttttgtct gctctccaaa ttctttttcg
     1261 ctgataactc ctgcaaaatt taaaagtctt gcattggcta tcaaagaata tttggtgttt
     1321 aattccctag tatagttttg ctgatcatat tctatgagcc ataaaaagcc aagtataaca
     1381 ctaaccccgg caaaaataaa aataaaagtt atagtataga aaattgaaga tttcattgag
     1441 taagcttata acctattcca cggatagaat gaatatattt tggggttttt ggatcatctc
     1501 ccattttttg acgaatcctg ctgataataa catctatact tttattacta gaatcctcgc
     1561 taatagaaga acaattataa acaagctctt cacgacttac tactccacct tcttttttaa
     1621 ttaaataact taaaatatca aattcagcat tagttaaagt aagctcttgt cctttcatgg
     1681 taataatatg tttatattga tcataaacaa gatcttttac gctttttgct atggcacttt
     1741 ttgtatttga aatacgcctt aaatggcttt taatgcgagc ttgtaattct tttggattat
     1801 aaggttttgg cagataatca tctgctccaa gttctaaagc attaacttta tctgttatat
     1861 catgccttgc acttgaaata ataataggcg tatcatattt tttacgaatt tcttcacaca
     1921 cttcaagccc atcaagtcct ggcaaagaaa gatctaagat aataagctga tactccttta
     1981 atgcaagctt agaaagacct atataaggtt catgtgctat atcaactttc atatcaaatt
     2041 tctctaaata ttcagctgta atttctgcta attctaaatc atcttctatc ataaggatat
     2101 ttgtcataat tttcctttat tttaaattta aatttaattt taaactagaa tttataacga
     2161 aaggaaaatc ctttcgttat ttttatttaa gcacaagtaa agtcgcaaaa ccattgcgat
     2221 atacccaaac tttagtaaat tcttttttat taacttgctt taaagcttgt tctaaatctt
     2281 ttaaattttt aatttcactt tgtcccacac ctataataat atcaccttct tggaaaccag
     2341 aattttttcc cttactcttt tgtttaacac tatcaactaa aacaccatta acatcctttg
     2401 gaatttgcaa acgatcctta agtcttggat ctaaatttct caaacttagg ccatcaatca
     2461 aatcactttg cacaccttta gcattttctt tctcaccttt gagagtaaag ttggtttgtt
     2521 tattttctcc atctctttca taatttagtg aaattttctg accaatttct aaagttccta
     2581 tataattttt aagatcaata ggacttttta taaccttatc attgacttta gtgactaaat
     2641 ctccacgctt aagtcctgct tcatcagcac ttgaaccttt ttgaacatcg gtaatcaaag
     2701 ctccttcttg atttttataa gcttttttag tgtcaccttg taaggctgaa atagtcacgc
     2761 ctaaaaatcc tctatcaatc ttgccttttt ctatgagttt tttggctata tcttttacca
     2821 tatttgaagg tatggcaaaa cctatgccat tgtttccacc tccgcgagat aagatcgctg
     2881 aattaattcc tactaaatat ccgcgactat ctactaaagc accacctgaa tttcctggat
     2941 tgatagaagc atctgtttgt ataaaatttt catattgatt taaacctata ttgtctttat
     3001 ttaaggcaga tattattcca cttgttacac taaaacccac accaaaagga tttccaagtg
     3061 caaagacaac atccccttcc attaaatcat cagaatttgt aaaaataata gctgaaagat
     3121 tattagcttc aattttaata acagccaaat ctgtttttgg atccttgcct ataagctttg
     3181 ctttgtattc tgtatcactt cctggtaaat ttaccataat aacatcagca tcatctataa
     3241 catgattatt tgtcactata tagccatctt ttgaaataat cactcctgat cctaaagaac
     3301 tcactacttc tttatcattt tttccctttc tttgaggaaa atcaaaatca aaaaattgtt
     3361 taaaataagg atcattaaaa aaatcatcta aaggacttgg acgatttact cttgtaatag
     3421 tttttgaggt agaaatatta accactgatt tttttgcatc tttaatagaa tcatgataag
     3481 aaagcaccgc atctccaaca gctggagtcg tacgattggt cgttgtagtt gattcgttaa
     3541 aattaatact tgcagcaaat aaagcacttg ctaaacttaa tgataaaaaa acctttttca
     3601 ttttatttcc ttttgttttt taaagataaa ttatctcgta aaatatttta ctgtgtccat
     3661 agtataaaac tgaaaattta caaaattgta aataaaacct tgagtgataa aaatttataa
     3721 aacttgattg acttaggcta aagtttatgt tataatttaa atcttaatat acaatcaagt
     3781 aaaaaatttt ttaaggaaat acaacatgaa tagtttatat gaaactcttg gggttaataa
     3841 aaacgctagt gcagatgaaa taaaaaaagc ctatcgccgc ttagctagaa aatatcatcc
     3901 tgatatcaat aaagaaaaag gtgcggaaga aaaatttaaa gaaattaatg ctgcttatga
     3961 aattttaagc gatgaaaaaa aacgcgcaca atatgatcaa tacggcgatt ctatgtttgg
     4021 tggacaaagt tttcatgatt tttcacgaaa tactggcggg gtaaatttag acgacatttt
     4081 aaaagatttg tttggaggcg gttttggagg acgttcaaga agtagtttta atggcttttc
     4141 ttcaaaaggc tttagcaccg gttttggtgg ttttggagga tttgaagaag aaaatttaga
     4201 cagcaaccta gaacttcaca ttccttttga aaaagctgtt aaaggtggag aacatagttt
     4261 taattttcaa ggcgaaacca tcaaatttaa aattccacac ggtataaaag aaggtgaaaa
     4321 actaagaatc cgctctaaag gaaagcaaag tcgaaatggg actagaggcg atttaatcat
     4381 cattgtaaaa atagaagaaa gttctattta cacaagagaa gatgatgatt tataccaaaa
     4441 agttgacatt tctttaaaaa ctgcactttt tggcggaaaa ataaacataa aaacactcaa
     4501 agaaggtaaa gaagaagcga caattaatat aacacccaat tcaaaaaata atcaaaaaat
     4561 tcgcttaaaa ggctatgggg tgcaaaatag aaaaaacgat atttacggag atatgtattt
     4621 gattttaaat gttattttac caaatttaga tactcttgat gaaaaattta tagaactctt
     4681 aaaagaaaaa ctaccttaaa gaaggaataa aacatggaac accattatga tgaacctgta
     4741 tatttaatca gcgttgtggc taaggtttta agtatacatc cacaaacctt aagacaatat
     4801 gaaagagaag gattgataga accaagtaga accgatggaa aaataagact ttattctcaa
     4861 agagatattg atcgcattaa acttatattg cgtctaacaa gagatatggg aattaatctc
     4921 gccggggtag atgttatctt aaaattgaaa aatcaacttc acgaatttga aaatttaatt
     4981 gatgaactac gcttggaatt aagcaaacaa aaagataaag aagcagccag taaagccatt
     5041 gtcaagcaca aaaatagctt tgatttgatt ttttatgaga aaaaataaaa aataatgaat
     5101 aattttttag aaattttttt aatcaccgtt gctatagcta tagttttaaa tgtcatattt
     5161 aaaaaatttg aaattccaac tatcattgga tatatagctg ctggagaaat tatttctgaa
     5221 atttatcatt taagtggcga aggtgaaatc acacatatag ccgaatttgg aatagtattt
     5281 ttaatgttta ccataggact tgaattttct tttaaacatt taatggcgat gaaacaagaa
     5341 gtttttttaa atggctcttt acaaatgctt acttgtggct ttatttttat gctacttgct
     5401 ataggaattt taggacttgg agataaaagc gccaccatag taggttttgc gctagcactt
     5461 tcatcaactg cagtggtgct taaaatttta aatgataatg gtgatataaa tgaacaatat
     5521 ggcagaaaag ctttaggtat tttacttttt caagatatag ctgttattcc tttgcttttg
     5581 cttgtagata ttttttcatc taataatcaa aacatagaaa aactcctttt taccacctta
     5641 atttcagcac ttattttaat cactttattg tttttcatag gtaaatattt agtagataga
     5701 atttttagac tcattatcca tacttcttct caagaaattt ttattagtac cgttttattt
     5761 atggtcattg gagcaagttt tttagcaaat tattttggat tttcttattc tttaggtgct
     5821 ttcatagcag gtgctttgat agctgaaaca aaatataaac ataaaatcga agcagactta
     5881 atcccattta gagatttgct tttaggactt tttttcataa ccgtaggcat gcaaattcaa
     5941 cttgatgtgg tggcgcaaaa ttggttttta atcatagttt taacccttgt tgtaatggct
     6001 ttaaaatttg gtatagtttt tggcttttta tttctttaca ctaaaaaaag agtggcgctt
     6061 aaaacagctt ttgctatagc acaaatagga gaatttgcat tagcaatctt ttctcttttg
     6121 caagcaaaaa atatgctcga tatcaaaact tcgcaaattc taatcgttgt ttctatttta
     6181 accatgatta tcacaccttt tattttaaac aatatacgca aaattacaaa tgttgtagaa
     6241 gatataactc ttaacaccaa taccgtgcaa aatattgata acaatatcaa gcttaaaaat
     6301 catcttgttg tttttggtta tggacgctta gggcaagaag tggtgcaaaa aatcaaaaac
     6361 accggtgtgc cttacttggt tttagaaagt gatttaaatt tagttgaact tggagttagc
     6421 cgtggtgaaa atgttgtttt tgctaatgcc gctcaagaag aaaccttaaa aattgccaat
     6481 atagaagaat gtgctgtagc cattatcaca gttaccaatg aagctaaact tgaaatttta
     6541 tgtcaaatat tagccaatta tcccaaacct atagatacaa tcatccatgt taatggaact
     6601 ttgaaaaaaa tgctcttttc tagcatagat gaaaatatac acatcattcg ttctgaaaaa
     6661 gtaatcgcta gaaacttagt tcaagaagca ttagaatgcc gcattcataa aaatacctaa
     6721 ggaaaaattt tgacaaaaaa tgaagaaaaa tccttgcgtg taaaatacct aagaaatctt
     6781 gaaaaatttt tcaatggtgc catgtgtgca cttaaaaaag aagattttga taaagctaaa
     6841 tttgaagaaa gaatgctaaa aaatgctaaa tttttcgaaa aaaatcctgc cgtgagtctt
     6901 aattcaagtt atgcaaaaaa tcttgaaatt tttgtcaatg cttgtttgga tttttctaaa
     6961 gaaaaaaacg aacttttaaa tcttgccaat gctttggata agcaaaaaaa acaaggtgaa
     7021 aaaaaagaaa agcataaaaa ttatttaaag gattatgaat gattaatgta ttttttgata
     7081 tagatggaac cttaatcgac agtgcaaatg caatttcttg tgcggttaat gaaataagac
     7141 aagatttaaa cctagtccca cttacaagag aaatcattat gcaaaccatt aacaccccaa
     7201 atatagattg ggcaaaagaa ctttacaata tagaaaattt tcatcactct agtttcaaag
     7261 aagggtatga aaaatatttt gtcaaacact atgaacaaag cgtggtgctt tttgaagggg
     7321 taaaagagct tttagaattt ttaaaaagca aaaattgttt tttagctatc gctaccaatg
     7381 ctccacaaag ctcgctttct agcatactta aaaaacatga aatcattcct tattttgata
     7441 aaattttagg tgtaagttta ggtataaaac ccaaacctca tcctatgatg ctagaacttt
     7501 taaaaaacga agctccgtat gaaataagta tttttatagg ggatagccaa aaagataaag
     7561 aatgtgctaa aaatgctaat ttgtcttatt ttcatgccaa atggtatcaa aaagatttaa
     7621 aggaaaatga atttagcagc acaaatgaac ttaaaggctt tttgcaaaag tatttataag
     7681 ttttttaatg aaattttagt taaaattgca aataaatttt taaaagggta gattatgagt
     7741 gaattgttaa tagaaatcgg cacagaagaa ttacccgcta ttcctttact aaaagaatta
     7801 gccaacatag aaaaaaaatg gaaaaatgtt ttagaagaat accgcttgct cagcgatttt
     7861 aatttctatt atactccgcg tcgtttagtt ttctttcata aaaattttgc aaataaacaa
     7921 gaggatagtt ttgctgaatt tataggagca cctaaaaatg tcgcttacaa aaatggaaat
     7981 ttaactccag caggacaaag ttttttacaa aaagcgggaa ttagtgaaaa tgaactcact
     8041 tttaaagaaa tcaaaggtaa agaagtttta taccaccaaa aagctatcaa aggtttacaa
     8101 agtcaagaaa ttttaggaga aatgatagat aaatttctaa aaagtcttaa ctttgggaaa
     8161 agtatgcgtt ggggtgcaaa ctcttttgag tttatccgtg caatccgttc tatagtttgt
     8221 attctaaatg atgagcttgt taattttcaa agttatggag taaaaagtgc taaaaaaact
     8281 ttcatacaca gaaatataag ttatgattta caagatttta ataatgcaaa agaatatttt
     8341 caactcctag aaaaaaacta catcatccta gatccactcc aaagaaaaga aagaatactt
     8401 gaacaattta aactcataga gaatcaagaa aatatacgaa ttggagaaga tgaagaactt
     8461 ttagctgaag tggttgccat cacagaatac cctaatgcac ttctaggaag ctttgaagaa
     8521 aaatttttag aaattcctag tgaggtgatt atcacttcaa tgagagaaaa tcaacgctat
     8581 tttgcagttt ttaatgacaa aagtttaagc aatcatttta tagtagtaag taatgcagta
     8641 tgtaaagatt attcaaaaat catacatgga aatgaaagag ttttacgtgc aagacttagc
     8701 gatgcaatgt ttttctacca aaatgatttg caaagcggtt taaaacctga aaaacttgcc
     8761 aaaatgattt atcttgaagg tttgggtaca atgcaagata aaagcttaag agagatcaaa
     8821 atcgctgaaa ttttgtgcca aatatttcat aatgataaaa tcgaaaatat cagcacagcg
     8881 ctaaaatatg ccaaagcgga cttagccaca caaatggttt atgaatttac tgatttacaa
     8941 ggtattatgg gaagttatta cgcacaaaaa atgggcttag attatgaaat ttgcttagct
     9001 ataaaagaac aataccttcc taactcagaa caagctccac ttccaagcac agaattttca
     9061 agcatagtag cccttgcaaa caaacttgat actcttatag gactttttag cataggaaaa
     9121 atcccaagcg gaacaaaaga tccttatgct ttaagacgag ctgctaatgg aatcatcaaa
     9181 atcgctttaa atttaaataa agaattcgat atccaaatcc tattagaaaa actttcaagc
     9241 tattataaaa gctttgatat gcagatttta aaagatttta tttttgaaag actttatact
     9301 ttttatacag tcaatgcttc ttttgtaaaa tctgttttaa gctcaaaaaa cacagatctt
     9361 atccacatca atcaaagcgt acatgctctt ataaaactta gcaaaaaaga taattttcat
     9421 gaaaatttca ccacttttaa aagactagct aacattgcca ataagacatt acacaaagtt
     9481 gatccaacgc tttttgctca agaaatagaa aacaaacttt acaaagcttt tcaagaaaaa
     9541 actaaggctg attctttaca agaaaaactt gaaaatcttt ttgcactcaa accctttatt
     9601 gatgaatttt tcgatcaagt gatgattaat gctgaagatg aaaagcttaa aaacaatcgc
     9661 caagctttgg tttatgaaat ttatgcagag tttttaaaga ttgctgatct taaagagtta
     9721 agtctatgaa agccttatgg ctttttttaa gccttactct ttggcttttt ggagccaaaa
     9781 atttagagct tgtcaaaggt caagccttat ttttagagct ggataaaaaa gattttttat
     9841 ctttaaaaaa caatgataaa aatattccta cttttgcaca ccctaaaaat caagaaaaaa
     9901 ttctagccat tttttccttg ccttacaaaa atcctccgca aaacaccaaa cttatcgcat
     9961 tttacaaaga taaaaaagaa gaaattctta taaaaacttt agaaggtaat tatcaaagtg
    10021 aaaaaataca agttgaaaac aaaaagattt ttccacctaa ggcggtacaa gaacgcattg
    10081 ccaaagaatt aaaagaggtc aatgtaattt atagctctta cactccaaaa gctttattta
    10141 atggtacttt taacatgcct ttaaattctt ttattacaag tgattttggc aaagcaagaa
    10201 ctttcaatga aaaagtagca agctatcata gcggaacaga ctttagggct accataggaa
    10261 cacccattta tgcagcaaac tcgggcatag tgaaaattgc aaaagatcgt tattttgcag
    10321 gaaattcagt aatcattgat catggttttg gaatttattc gcaatattat catctttcta
    10381 agataaaagt taaaagggga caaaaaatca aaaaaggcga acttttagga ttaagcggag
    10441 ctacaggcag ggtaagcgga ccacatttgc attttggaat tttagccgga ggcaaacaag
    10501 tggatccttt agattttgtg tctaaattta ataccatttt tcaatgaaat ttagtatttt
    10561 ttttcacact tggctatatg agaattacta taaaaatgct gtaaatatag gaaaaaatgg
    10621 ggattttttt actgccgtaa gtgtgggaaa tctttttggt acacttttgg ctcaacattt
    10681 tttaaattta gtggataaaa aaattttaaa actcccttta gagcttgtag aaataggggc
    10741 aaatgaaggc tatttaagtc gtgatttttt agctgctttg cttgaattaa gaccccaaat
    10801 tttttctcaa atttctttct tcatcataga accacatgaa aaattaagaa ctttacaaaa
    10861 aaagacctta gaaggagtgg aatttacaca caaaaatagt cttaaagaat gccactttaa
    10921 aaatgctttt ttcttttgca atgaactttt tgatagtttt acttgcgaat taatagatga
    10981 taataaaatg gcatttgtag aaaattttaa acttgttttt aaaaatatgg atgaaaattt
    11041 gattgcaaaa tgtaaaactt taaatcttaa aaaaggcgaa ctaagcttag aacttgaaga
    11101 tttctttaaa gacttaaatc aagcttgcga tcaatttata tttgcaggtt ttgattatgg
    11161 aatttttaat ccccaaaaat ttagtttaag aatctatcaa aaacacgaag tttttaatcc
    11221 ttttgaaata tctttaaaag attttttcgg caaaagcgat ttaacctata atatcaattt
    11281 tactcaagtg caaaatctca taaaagaatt tgattttaag cttttagctt ttaaaaaaca
    11341 aagctttgct ttaatggatt ttggttttga aaaattacta gaacacgcaa aaaagaaaaa
    11401 tatcaaaact
//
LOCUS       DAPWAA010000049        10795 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.049, whole genome shotgun sequence.
ACCESSION   DAPWAA010000049 DAPWAA010000000
VERSION     DAPWAA010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10795
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.049"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..1126
                     /locus_tag="RTF91_001277"
     CDS             <1..1126
                     /locus_tag="RTF91_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDZ4944153.1"
                     /translation="QSFAALSVEELTWDNGDTLLKFLQRNSIPMSLYYGLDREDQELA
                     SDIAYKIKYQVLKDENNNIEQVLIPISDDLQIHIYKDKDGQYTLAFTPVSYQKKDRIL
                     HLTIKSSAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDKVTLYYEQKRRMGKLW
                     GDINIKMAMVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYTRISSPFTTARYH
                     PVLKRYRAHLGIDYAAPIGTPVKSAGKGVVTFIGTKGGYGNVIQIKHDSGYMTLYAHL
                     SRFAKIKNGQKVNQGQVIAYVGSTGMSTGPHLHFGVYLNNKAINPASVVKIAKSELNG
                     KAKENFKHIIAQYEQVVKEALDSNQPNPPKEEDFENYIEF"
     gene            complement(1123..1326)
                     /locus_tag="RTF91_001278"
     CDS             complement(1123..1326)
                     /locus_tag="RTF91_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944154.1"
                     /translation="MYERKDLRVLKIIQKAREFGDGDLLNEDLVKQLIDAEFFEINEK
                     EKEELITLLNSLINAKDKALLSN"
     gene            complement(1331..2011)
                     /locus_tag="RTF91_001279"
     CDS             complement(1331..2011)
                     /locus_tag="RTF91_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HDZ4944155.1"
                     /translation="MGRSGENFLSLLENDKVSIFCAYDKDYNVFRAKDYNENLFFHLG
                     FKDIKKCVFMDQIHSRKVVIYDENLKNLSCDGLVSKEKNIALCVLSADCLPLILYHES
                     GIIAALHSGRKGSFENILKECMEQVATQNPHLDKMKFHLFILPGICAKNYEIDGEILK
                     FAKKEFKEFVQENKLDLKALVKFQAQNLGIENIKDCGICSFDDKSFFSYRRDKTPKRF
                     VSVIYLKG"
     gene            complement(1975..2586)
                     /locus_tag="RTF91_001280"
     CDS             complement(1975..2586)
                     /locus_tag="RTF91_001280"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDZ4944156.1"
                     /translation="MFNGLIREIAKVQSYQNNTLSLKANYRPNLGDSIAVNGTCLSVT
                     KLYEGGFEVELSRESRTHIAIENLKDKVHIEPALRYGDRIDGHLMQGHIDFIGILEKI
                     QKDENGVDFYISLPKEAMKFMAAKGSIGIDGVSLTINEILKNSIRLTIIPITFKETLF
                     KEYKIGRKINIESDLLARYIYAQLQGKNKGLSWEEVERISYLY"
     gene            complement(2595..5135)
                     /locus_tag="RTF91_001281"
     CDS             complement(2595..5135)
                     /locus_tag="RTF91_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944157.1"
                     /translation="MKKIFYGIMGFIVVLLIALYTMLFTSFGNNIVANIAQKKIKEST
                     GIDVNITRFNLRFSSLELQANLANMADLNLKGVLSPFRLGFNLDYIISLNQNYTKNLS
                     LNLSQNLSFGGKIQGKASDFTLDGKGYLLGSNVLLNARMYDYSPIALNLDAQNLKIEE
                     ILRLLSYPNYAKGFLNAQAKISAQDLKPDGNIIIKLDTSYINYEAIKKDFSLDLPLNS
                     NPKAEILANVKEDKISAVSKIYNDYLILQTQKTLYDISKNTLNTDFNLNIPSLTKLEK
                     LTKTKLNGSLDIIGETSVVNNALSSLNAQVIGLGGEVKASLKNNKIFADINEASLEKL
                     LAFAGYGGLVSGNLNAKLLNANLDFSDFDFEAKINNAKINTNELKKIAKIELPNTIFT
                     LDAKANAKNSNISYDALLASNLLNIKKLKGTYNLKNSELNTDLNAFINDLSQFNAITR
                     QNLQGKAELNAKAHIIGAQIQNLNANANLADGIIKADSNGKKLDLNIDNLDLSKLFVI
                     AGMPNYVSGIVNAKANLDNIDFNNLNGKVNLEAKGIVNAAILSKILNKKFPNNTNYDL
                     NTKIDFKNNIAKFDSVLNSSLANLTKLQGSFDISKMLLDANFDLKIDDFSKLGFLLDR
                     KLKGKAEFNGKVGFNKSLNFAVNSPNLFEGKLQSTLKDNLLLAQLNGVDLSSLAQGLD
                     FMDIYQGKADAKANYNLLSEEGEVDLDMKEGKLKSNLITNALKILTLKDITNDVYRTA
                     NVKALIKKENIKLDLNMQADRSYILIQAGVLNSKSGALNLPFDIKLDRANFKGSITGT
                     TENPKVNLNAGSVLNSIKNVVGGGVSDSAKNTGDKVDKAVNKLLNKIF"
     gene            5300..5560
                     /gene="groES"
                     /locus_tag="RTF91_001282"
     CDS             5300..5560
                     /gene="groES"
                     /locus_tag="RTF91_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDZ4944158.1"
                     /translation="MNFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVS
                     KEITDITNGDKIVFTKYGGTEIKLDNSEYLVLNLDDILGILK"
     gene            5580..7208
                     /gene="groL"
                     /locus_tag="RTF91_001283"
     CDS             5580..7208
                     /gene="groL"
                     /locus_tag="RTF91_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277428.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDZ4944159.1"
                     /translation="MAKEIIFSDEARNKLYEGVKKLNDAVKVTMGPRGRNVLIQKSFG
                     SPTITKDGVSVAKEVELKDGLENMGASLVREVASKTADQAGDGTTTATVLAHAIFKEG
                     LRNITAGANPIEVKRGMDKACEAIVAELKKLSREVKDKKEIAQVATISANSDEKIGNL
                     IADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKMTVELSSPY
                     ILLFDKKIANLKDLLPVLEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVK
                     APGFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNG
                     AGEKSNIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKK
                     DRVDDALSATKAAVEEGIVIGGGAALIKAKAKIKLNLQGDEAIGATIVERALRAPLRQ
                     IAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSV
                     ASMLLTTEATISEIKEDKPAMPDMSGMGGMGGMM"
     gene            complement(7243..7485)
                     /locus_tag="RTF91_001284"
     CDS             complement(7243..7485)
                     /locus_tag="RTF91_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:pantothenate symporter"
                     /protein_id="HDZ4944160.1"
                     /translation="MSLTHDDLSNLCILISLLFLDYILINVKTFRQMTRFANFYGVIM
                     VLSFIVSWQIFNAYFNFLVFLILFFVSYKIWQFKKK"
     gene            complement(7476..7691)
                     /locus_tag="RTF91_001285"
     CDS             complement(7476..7691)
                     /locus_tag="RTF91_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944161.1"
                     /translation="MKKSLISLIALCLSYTAMQAVCKYAEEQREDRAVPVATLIRLGM
                     GYGISYVNAPDIGGQTYTGRPPFGRCH"
     gene            complement(7933..9126)
                     /locus_tag="RTF91_001286"
     CDS             complement(7933..9126)
                     /locus_tag="RTF91_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDZ4944162.1"
                     /translation="MAKKVIRQILLIYLTTTGIFLTIFFALWYQKLYEELVVLKGTTL
                     REDHRNIVINILNSRFTPMDISAKNIAQSTALKFAIFDGKKIVFSNIDFDLRKAKIEL
                     KGRGICDNKIFFLAPMSTDHYFLRHASNEEANTNDGLQILIQGEDVGKDLFWIRAKVF
                     GFAIMAFFILGLIAYVLVKIALKPLEDKISTLNRFIKDSTHELNTPLSVILMSIEQLE
                     HQNLGNNAKFTRIKLAAKSLSQVYSDLVFYNFPNTLEIEKQKLNLKVLLEERLEYFKV
                     FFEQKKIVLRLDLSQANIFAPKSQISKLIDNLISNAIKYNKKGGAISIILKTNFLSIA
                     DTGCGISKSNLNHIFDRYARFNANQGGFGIGLSLVKKICDDNDIKIICESVENEGSVF
                     KLNWN"
     gene            complement(9119..9784)
                     /gene="dccR"
                     /locus_tag="RTF91_001287"
     CDS             complement(9119..9784)
                     /gene="dccR"
                     /locus_tag="RTF91_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DccR"
                     /protein_id="HDZ4944163.1"
                     /translation="MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAYE
                     RHFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFMTSLNTTNDLKEGFDAGCDDYIK
                     KPFELAELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNDKTLALPSKEIK
                     LLSLLLKNKNNFLSTERIFEELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGY
                     CYG"
     gene            9928..10528
                     /locus_tag="RTF91_001288"
                     /pseudo
     CDS             9928..10528
                     /locus_tag="RTF91_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344615.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
     gene            10539..10787
                     /locus_tag="RTF91_001289"
     CDS             10539..10787
                     /locus_tag="RTF91_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HDZ4944164.1"
                     /translation="MKYNAKTYSFKIPLELKERLDNLSKNLSKPKSVIVKEAIEAYLN
                     EVEDFSFAVNALEELKDGNYQKASKKIDRIVKNLKQRK"
BASE COUNT         3958 a         1714 c         1442 g         3681 t
ORIGIN      
        1 tcaaagtttt gcagctttaa gtgttgaaga gctaacttgg gataatggag ataccttact
       61 taaattctta caaagaaatt caatacctat gtcactttat tatggacttg atagagaaga
      121 tcaagaactt gcttctgata tagcctataa aataaaatat caagttttaa aagatgaaaa
      181 caataatata gaacaagttt taattccaat tagtgatgat ttacaaattc acatttataa
      241 agacaaagat ggacaataca ctcttgcttt tactcctgta tcttatcaaa aaaaagatag
      301 aattttacat ttaacgatta aaagttctgc ttatcaagat gtctatgagg aaagtggtag
      361 tagtacttta gctcgtgcca tggttcgtgc ttttcgcgga agtataaatt ttcgcaatat
      421 ccaaaaagga gataaagtaa ctctatacta tgaacaaaaa agacgcatgg gaaaactctg
      481 gggtgatatt aatataaaaa tggcaatggt agaaatcaat aaaagcgcaa gagaagtctt
      541 ttcttacaat gatatattct atgatcgtga tggtaaagaa ttagaatctt ttttgcttac
      601 aaagcctgtt aattacacta gaatttcttc tccttttaca acagcaagat atcaccctgt
      661 attaaaacgc tatcgtgccc atcttggtat agattatgcc gcacctatag gaactccggt
      721 gaaaagtgct ggaaaaggag tggtaacttt tataggtaca aagggtggtt atggaaatgt
      781 aattcaaatc aaacatgact caggttatat gactttatat gctcatctta gtcgctttgc
      841 aaagattaaa aatggacaaa aagtaaatca aggacaagtg attgcctatg ttggctcaac
      901 gggtatgagc acaggccctc atttgcactt tggagtatat ttaaacaata aagctataaa
      961 tcctgcatct gttgtaaaaa tcgctaaatc agagcttaat ggaaaagcaa aagagaattt
     1021 taaacatatc atagcccagt atgaacaagt tgttaaagaa gccttagact caaatcaacc
     1081 taatcctcca aaagaagaag attttgaaaa ctatatagaa ttttaattac ttaacaacgc
     1141 cttatctttt gcattgatta aagaatttag aagagttata agctcttctt tttctttttc
     1201 attaatttca aaaaattctg catcaattaa ctgctttacc aaatcttcat ttaataaatc
     1261 tccatcacca aattctctag ctttttgaat gatttttaat actcttaaat cttttctttc
     1321 atacattttt ttagcccttt aaataaatca cactcacaaa acgcttaggt gttttatcac
     1381 gacgataaga aaaaaaactc ttatcatcaa agctacatat cccgcaatct ttaatatttt
     1441 caatacctaa attttgagct tgaaatttta ctaaagcttt taaatcaagt ttattctctt
     1501 gaacaaattc tttaaattct tttttggcaa attttaaaat ttctccatct atttcatagt
     1561 ttttagcaca aattccaggc aagataaaaa gatgaaattt catcttatct aaatgcggat
     1621 tttgtgtagc aacttgttcc atacattctt ttaagatatt ttcaaaactt ccttttctac
     1681 ccgaatgcaa agctgctata ataccacttt catgatataa aatcaaaggc aaacaatccg
     1741 cacttaaaac acaaagagca atattttttt ctttacttac aagtccatca caactaagat
     1801 tttttaaatt ttcatcataa atcacaactt tacgagaatg aatttgatcc ataaaaacgc
     1861 attttttaat gtctttaaaa cctaaatgaa aaaataaatt ttcattataa tccttagctc
     1921 taaaaacatt gtaatcctta tcataagcac aaaaaatgct gactttatca ttttctaata
     1981 aagataagaa attctctcca cttcttccca tgataatcct ttgtttttgc cttgtaattg
     2041 tgcataaata tatcgagcaa gtaaatcgct ttctatgttg atttttctac ctattttata
     2101 ctctttaaaa agtgtttctt taaaagtgat agggataatg gtaagcctaa tactattttt
     2161 taaaatttca ttgatagtaa gactcactcc atctatacct atgctccctt ttgctgccat
     2221 aaatttcata gcttctttag gtaaagatat ataaaaatcc actccatttt catctttttg
     2281 aatcttttca agtatgccaa taaaatcaat atgcccttgc atcaaatgcc catcgattct
     2341 atcaccatat cttaaagcag gttctatatg aactttatct tttaaatttt ctatagctat
     2401 atgagtgcga ctttcacgag aaagctccac ttcaaaacca ccctcataaa gttttgtaac
     2461 acttaaacaa gtcccattta cagctatact atcgccaaga tttggacgat aatttgcttt
     2521 taaacttaga gtattgtttt gataagattg aaccttagca atttctctta tgagtccatt
     2581 aaacattttt taccttaaaa aatcttattt aacaatttat ttaccgcttt atctacttta
     2641 tcgcctgtat ttttagcact atcactcaca ccaccaccca ctacattttt aatagaattt
     2701 aacacacttc ctgcatttaa attcacctta ggattttctg tagttcctgt aatacttcct
     2761 ttaaaattag ccctatctag cttaatatca aaaggtaaat ttaaagcacc gcttttagaa
     2821 tttaaaactc ccgcttgtat taggatataa gaacgatctg cttgcatatt aagatcaagt
     2881 ttgatatttt cttttttaat caaagcctta acattagctg tacgataaac atcatttgta
     2941 atatctttta gtgttaaaat ttttaaagca ttagtaataa gatttgattt tagtttgcct
     3001 tctttcatat ccaaatcaac ttcaccttct tcgcttaaaa gattataatt tgctttcgca
     3061 tctgccttgc cttgataaat atccataaaa tccaaacctt gagctaagct acttaaatcc
     3121 actccattta attgagcaag taaaagatta tctttaagcg tgctttgaag ctttccttca
     3181 aataaatttg gactatttac agcaaaattt aaactcttat taaaacccac ttttccatta
     3241 aattcagcct tgcccttgag ttttctatct agcaagaaac ctaattttga aaaatcatct
     3301 atctttagat caaaattcgc atctaaaagc attttgctta tatcaaaact cccttgaagt
     3361 tttgtaagat tagctaaaga tgaatttaaa acagaatcaa atttagctat attattttta
     3421 aaatcaattt tagtatttaa atcatagttt gtattatttg gaaatttttt attcaaaatt
     3481 ttacttaaaa ttgcagcatt tacaatacct ttagcttcta aatttacttt accattaagg
     3541 ttattaaaat caatattatc taaattagcc ttcgcattaa caatcccact aacataattt
     3601 ggcatacctg ctataacaaa aagtttagat aaatcaagat tatcaatatt taaatcaagc
     3661 tttttaccat ttgaatcagc tttgattata ccgtctgcta aatttgcatt tgcatttaaa
     3721 ttttgtattt gagcacctat aatatgagct tttgcattaa gttctgcctt gccttgtaaa
     3781 ttttgtcttg ttatagcatt aaactgagat aaatcgttaa tgaaagcatt taaatctgta
     3841 tttaactcgc tattttttaa attataagtt cccttaagct ttttaatatt aagcaaattt
     3901 gaggcaagta aagcatcata agaaatatta ctattttttg catttgcttt agcatcaaga
     3961 gtgaaaatcg tatttgggag ttctattttg gctatttttt taagttcatt agtattgatc
     4021 tttgcgttat tgatcttcgc ttcaaaatca aaatcggaaa aatctaaatt tgcatttaag
     4081 agcttggcat ttaaatttcc agaaactaaa cctccatatc ctgcaaaagc tagcaatttt
     4141 tctaaacttg cttcgttaat atctgcaaaa attttattat tttttaaact tgcttttact
     4201 tctccaccga gtccaataac ttgagcattt aaacttgata aggcattatt tacaacactt
     4261 gtttcaccta ttatatccaa actaccattt aattttgttt tagtaagctt ttcaagcttt
     4321 gtaagagaag gaatatttaa attaaaatcg gtatttaagg tatttttact aatatcataa
     4381 agagtttttt gagtttgcaa aataagataa tcattgtaaa ttttactcac agcagaaatt
     4441 ttatcctctt taacattggc taaaatttct gctttaggat tagaatttaa aggcaagtcc
     4501 aaagaaaaat ctttttttat agcctcatag tttatatagc ttgtatcaag ttttatgata
     4561 atattcccat caggttttaa atcttgcgcc gaaatttttg cctgagcatt taaaaaacct
     4621 ttagcataat taggataaga tagaaggcgg agtatttcct ctatcttaag attttgcgca
     4681 tctaaattta aagcaatagg actgtagtcg tacattcttg catttaaaag cacattcgag
     4741 cctagtaaat aaccctttcc gtctaaagta aaatcacttg cttttccttg aatttttcca
     4801 ccaaaagaaa gattttgact taaatttaaa cttaaatttt tggtataatt ttgatttaaa
     4861 gaaataatat aatcaagatt aaacccgagt ctaaaaggac tcaaaacccc tttgagatta
     4921 agatctgcca tatttgctag atttgcctgt aattcaagac ttgaaaaacg caaattaaaa
     4981 cgcgtaatat ttacatctat tcctgtactt tctttaatct tcttctgtgc tatatttgcc
     5041 actatattat taccaaaact tgtaaaaagc atggtataaa gagcaatcaa aagcacaaca
     5101 ataaaaccca taatgccata aaaaatcttt ttcattattt atcctttagt ttattttata
     5161 aaataacttt agtcaataaa gctaaacttt tataaatatt ttaatttaaa gtattgacaa
     5221 aattcatttt ttatagtatg attttatcac tctaaattaa agagtgctaa aattaacatt
     5281 tttttaagga tggacaaaaa tgaattttca acctttagga aagcgtgttc tagttaaacg
     5341 cgtagaagaa accaaaacaa cagcctcagg cataattata ccagataatg ctaaagaaaa
     5401 gcctttaatg ggtgaagtag tagcagtaag taaagaaatc actgatatta caaatggcga
     5461 taaaatcgta tttactaaat acggtggaac agaaatcaaa cttgataata gtgaatattt
     5521 agttttaaat ttagatgata tcttagggat tttaaaataa tttataaaaa ggataaaaaa
     5581 tggcaaaaga aattattttt tcagatgaag caagaaacaa actttacgaa ggtgtcaaaa
     5641 aacttaacga tgcggtaaaa gtaaccatgg gcccacgcgg acgcaatgtt ttaattcaaa
     5701 aaagctttgg ttctccaact atcaccaaag atggcgtaag cgtagctaaa gaagtagaac
     5761 ttaaagatgg tcttgaaaat atgggtgctt cacttgtaag agaagtagca agcaaaacag
     5821 ctgatcaagc aggtgatgga acaactactg caactgtttt agcacatgca atttttaaag
     5881 aaggtttaag aaatattaca gcaggtgcaa atcctatcga agtaaaacgc ggtatggata
     5941 aagcttgcga agctatagta gctgaactta aaaaactttc tcgcgaagta aaagataaaa
     6001 aagaaatcgc acaagttgca acaatctcag caaattctga tgaaaaaatc ggaaatttaa
     6061 ttgctgatgc tatggaaaaa gtaggcaaag atggagttat cactgttgaa gaagcaaaat
     6121 caatcaatga tgaattaaat gtggttgaag gtatgcaatt tgatagaggt tatttaagcc
     6181 cttattttat caccaatgca gaaaaaatga cggtagagct ttcaagccct tatatcttgc
     6241 ttttcgataa aaaaatcgcg aatttaaaag atttgttacc agttctagaa caaattcaaa
     6301 aaacaggcaa accgctttta atcattgctg aagatatcga aggcgaagcg cttgcgactt
     6361 tagttgtaaa taaacttcgt ggcgttctta atatttcagc agtaaaagct ccaggttttg
     6421 gtgatagaag aaaagctatg cttgaagata tagcgatttt aacaggtggg gaagtgattt
     6481 ctgaagaact tggaagaact cttgaaagcg caactataca agatcttggg caagcttcta
     6541 gcgtaatcat cgataaagac aatacaacca tagtaaatgg tgcaggcgaa aaatcaaata
     6601 tcgatgcaag agtaaatcaa atcaaagcac aaattgctga aacaacttca gattatgata
     6661 gagaaaaatt acaagaaaga cttgcaaaat taagcggtgg cgttgcagtt attaaagtag
     6721 gtgcagcaac tgaaactgaa atgaaagaga aaaaagatcg cgttgatgat gctttaagtg
     6781 caaccaaagc agcagtagaa gaaggtatag taatcggtgg tggtgcagca cttatcaaag
     6841 caaaagctaa aatcaaactt aatctacaag gtgatgaagc aatcggtgca actattgttg
     6901 aaagagcttt aagagcacct ttgagacaaa ttgctgaaaa tgcaggtttt gatgcaggtg
     6961 tggtcgtaaa tagcgtagaa aatgctaaag atgaaaacac aggttttgat gcagcaaaag
     7021 gagagtatgt aaatatgctt gaaagcggaa ttattgatcc tgttaaagta gaaagagtag
     7081 ctttacttaa tgcagtttct gtagctagca tgcttttaac cacagaagca acaattagtg
     7141 aaatcaaaga agataaacct gctatgccag atatgagcgg tatgggagga atgggtggta
     7201 tgatgtaagc cttaccacca ataatcagca aatttttgct gattatttct ttttaaactg
     7261 ccaaattttg taagatacaa aaaataaaat taaaaaaaca agaaaattaa aatacgcatt
     7321 aaaaatctgc caagatacga taaaagacaa taccataatc acaccataaa aatttgcaaa
     7381 gcgagtcatt tgtcggaaag tctttacatt tatcaaaata taatctaaaa ataaaagcga
     7441 aattaaaata caaagattgc ttaaatcatc atgggtcaat gacatctccc aaaaggcggt
     7501 cttcctgtgt atgtttgtcc tccaatatct ggtgcattta catacgaaat accataaccc
     7561 ataccaagcc ttattaaagt agcaacaggc acagctctat cttctctttg ctcttcagca
     7621 tatttacaaa cagcttgcat agccgtataa gataaacata aagctatgag agaaatcaag
     7681 ctttttttca tagttcattt ccttttttaa taaatagtaa aattctactt tatatttaat
     7741 aaaattaata ttaattatca aaaatttatt ttacaagatt aaatatctat aataaagctt
     7801 ttttaataaa tttattttat agaagaataa ttattttatt gataataaat attaaaataa
     7861 tccgataaac ccttaatgct ttataaaatt tttattgttc ttagttttta attaacttgt
     7921 ttaaatatta ttttaattcc agtttaattt aaaaacactt ccttcatttt ccacagattc
     7981 acaaataatc ttaatatcat tatcatcgca aatttttttt accaaagaaa gccctatacc
     8041 aaatcctcct tggttggcat taaaccttgc atacctatca aaaatatgat ttaaatttga
     8101 ctttgaaatc ccacaacccg tatcagcaat actcaaaaaa ttggttttta agattataga
     8161 aattgctcca ccttttttat tatatttaat tgcattgctt ataagattat caatcaattt
     8221 agaaatttga ctcttaggag caaaaatatt tgcttgactt aaatcaagtc ttaatacaat
     8281 tttcttttgt tcaaaaaata ctttaaaata ttccaatctt tcttcaagca atacctttaa
     8341 attaagtttt tgtttttcta tttctaaggt attaggaaaa ttataaaaaa caagatcaga
     8401 atacacttga gataagcttt ttgcagcaag cttaatcctt gtaaatttag cattatttcc
     8461 taaattttga tgctcaagct gttctatgct catcaaaata acacttaatg gagtattaag
     8521 ctcatgcgtt gaatctttaa taaatcgatt tagtgtgctg attttatcct ctaagggttt
     8581 taaagcaatt tttaccaaaa cataagctat taaacccaat ataaaaaaag ccataatagc
     8641 aaaaccaaaa acttttgctc taatccaaaa aagatctttg ccaacatctt caccctgtat
     8701 taaaatttgc aaaccatcat tagtatttgc ctcttcatta ctagcatgtc ttaaaaaata
     8761 atgatccgta ctcataggag caagaaaaaa aattttatta tcacaaatac ctctaccctt
     8821 aagctctatt tttgcttttc ttaaatcaaa atctatatta ctaaaaacaa tctttttacc
     8881 atcaaatata gcaaatttta atgctgtact ttgagcaata ttttttgcac ttatatccat
     8941 gggagtaaag cgagaattta agatatttat aacaatattt ctatgatctt ctctcaaagt
     9001 agtacccttt aagacaacca attcttcata taatttttga taccataatg caaaaaaaat
     9061 agttaaaaaa atacctgtag ttgttagata gattaataaa atttgcctaa tgactttttt
     9121 agccatagca atatcctcta cctctttggt ttataatttt ttcttttcct aaaattttac
     9181 gtaaattttt tacataagct cttaaactta actcactagg ctcctcatca taatcccaaa
     9241 gttcttcaaa aattctctcc gtacttaaaa agttattttt atttttaagc aataaagaca
     9301 aaagtttaat ctctttactt ggcaaagcca aggttttatc attatgataa agaatttgtg
     9361 tagtaaattc aaacctaaat ccatctccta aatcttcaaa atcttcattt ttatgcgaaa
     9421 aagctctttt aagcagagcc ttaaccctga tagacagttc agcaagttca aaaggttttt
     9481 ttatgtaatc atcacaacct gcatcaaaac cttcttttaa atcatttgtt gtatttaaag
     9541 aagtcatgaa aattgccggg gtttgttttc cactttttct taattcttta agtaaggaaa
     9601 aaccatctcc taaaggaact tttacatcta aaatccaaag atcaaaatgt ctttcataag
     9661 ccatatctaa agcttcttgt gcattatcac ataaaaatac ttcatatcct tcatcattta
     9721 aaaactcttc aatgatctca ctcaaactca aatcatcttc taaaagtaaa attttagcag
     9781 ccataattta aatctttcta attccaatct cttaatgcat cattgtatca aaattcttat
     9841 gaattgttta ataaaatttc atttttattt aatttgtttt tatctataat cctttaatac
     9901 aaataaattt ttccttaagg agttaaaatg cttccaaaat gggataacag ttatagtgta
     9961 cacaattgcc aaaattgata agcaacataa aaagcttttt gagcttgctg caaaagttga
    10021 aattgtatca gataaatctg taagtaaaaa tgaagtcaaa gagcttttgg ctgaattttt
    10081 taattatatg aaagatcatt ttaatgatga agaaaagtat atgcaactaa taggttatcc
    10141 ggatttagaa gaacatcgca aaatacataa agaaatcatc caaactatga ttaatttaat
    10201 caaagatatc aaatcaacca atgatcttaa agaaaagctt tatataatag ctaaaaaatg
    10261 gcttttagaa cacatactat acgaagacat gaaagttgaa aaatggagaa gttcttcttt
    10321 atctacagat gatggtagtg atgttagctt tgaagcagca gaagatgaaa ataatgagca
    10381 tctacaattt tatctttata tctgtaattg tccaggtaaa attcacgatg ttccttatag
    10441 tattcatcaa aaaatagaat tgcaaggtca taaatttgtt tgtaaaactt gcaaacaagc
    10501 tataaaattt cacaaaaaac attcttaagg aggataaaat gaaatacaat gcaaaaactt
    10561 attcttttaa aataccttta gaacttaagg aacgcttaga taatttaagt aaaaatcttt
    10621 ctaaaccaaa atcagtcata gtaaaagaag ctatagaagc ttatcttaat gaagtcgaag
    10681 atttttcttt tgctgttaat gctctagaag aacttaaaga tggaaattat caaaaggcaa
    10741 gtaaaaaaat agacagaatc gttaaaaatc ttaaacaaag aaaataaaaa cttta
//
LOCUS       DAPWAA010000050        10612 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.050, whole genome shotgun sequence.
ACCESSION   DAPWAA010000050 DAPWAA010000000
VERSION     DAPWAA010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10612
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.050"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..229
                     /locus_tag="RTF91_001290"
     CDS             <1..229
                     /locus_tag="RTF91_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDZ4944165.1"
                     /translation="KQLFTLIDKNLNLLIKNLNAQELNNFLKEYLSFLKHEKNEENLQ
                     QSFKNLSRIFHKKNFTAYDLRFDIQNNDEPF"
     gene            311..583
                     /locus_tag="RTF91_001291"
     CDS             311..583
                     /locus_tag="RTF91_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HDZ4944166.1"
                     /translation="MMPFSDEELINPVKASLEKSLPMLERDGGGLEFLGIKNGVVYVH
                     LIGACKGCTSSGTTLKYGLERQLKIDIHPEITIVNLNGGVEEFAKL"
     gene            570..1121
                     /locus_tag="RTF91_001292"
     CDS             570..1121
                     /locus_tag="RTF91_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDZ4944167.1"
                     /translation="MQNYKKLGIEHFYKKDFKTAKMYFFMAYEKRKNKRLLNFICLCD
                     LALKSPKEASLLFDFYIEHYKISNIDKDLEEILNTIEFNKQENKQEIEFEDGHALNYQ
                     DFLKSEEELGFQKSFENIIHSTKLVIDNRDDFLDFLEKLLDNGYKDMTLNYIENVMPH
                     FWANDRFIKLQEKLIGFKSEIKT"
     gene            1105..2388
                     /locus_tag="RTF91_001293"
     CDS             1105..2388
                     /locus_tag="RTF91_001293"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDZ4944168.1"
                     /translation="MKLKLENSFITDNTLECEKECFFLQTTQNAKFHTQALEKGAKII
                     DVNECKKLLKIDEKIKIIGITGTNGKTTTAAAIYSILLDLGYKCGLCGTRGAFINDES
                     IDEKTLTTSPILKTLEYLQIATQKKCDFFIMEVSSHALIQNRIEGLKFAAKIFTNITQ
                     DHLDFHGNFENYKEAKELFFTDESLKFINKDALAIKFNVCNAFTYGIENPALYQIKAY
                     SLEEGISAIAKNKDQTFHIDSPLLGLFNLYNLLAASACVNELAKPNLKDLEKAISGFG
                     GVCGRVEQVAKGVIVDFAHTPDGIEKVLNTLKNKKLIVVFGAGGDRDKTKRPLMGKIV
                     EHFAKIAIITSDNPRSEEPKTIMEEILLGFKKKEKVLTIEDRKEAIKKALELKEKDDL
                     VVILGKGDETTQEIKGVKYPFSDKVVINEILKNQG"
     gene            2392..2700
                     /locus_tag="RTF91_001294"
     CDS             2392..2700
                     /locus_tag="RTF91_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDZ4944169.1"
                     /translation="MFENMDFSKMSELLNQVQEKAKNIELELANREFSAKSGAGLVKV
                     SANGKGEIIDVSIDDSLLEDKESLQILLISAINDVLAMVAQNRSSMANDVLGGFGGIK
                     "
     gene            2700..3794
                     /locus_tag="RTF91_001295"
     CDS             2700..3794
                     /locus_tag="RTF91_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HDZ4944170.1"
                     /translation="MRLFLIVCMLFTLSFGIERPKFEDFLAGYERNKASMLNYEGMSA
                     FALSENLLAVLKQPNTKLNKYVKYDPFLNLYLVRTDFSLIPTPMGDEEKLTRNDWVGI
                     WDPDKPYIGHIKYLAQNIDEKDQLDFNSKIGLLGTPCCEMMGIALNNSSFIGNRYLKH
                     FMKYNDVYWGDIGVDFVVRENKIYVHNVRKNPQFLINDQIISVDGLPANDLRKLNEKI
                     LFADRGSTLYFQVLRDNMDLNISTEVFAKDLSKFNLPDSKPKPKITNFTSNLGLTVNT
                     NLIITKIDPKSKASNAGFMVGDKILRVNNIILNNFKELQNILSAGNDFSVLIERKSNK
                     LPLSNLNNELDGNANSGGDGKFQFFIRLTK"
     gene            3791..4636
                     /locus_tag="RTF91_001296"
     CDS             3791..4636
                     /locus_tag="RTF91_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDZ4944171.1"
                     /translation="MNLKELFIHHLEKNLPKVESFHPFFNEALALMLKAGGKHFRAQL
                     LLSVVQSNKPELINQALDAALALEFIHTYSLIHDDLPSMDNADFRRGISTLHKSYDET
                     TAILVGDALNTEAFLVLSHANLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRL
                     SLNELEFLHTHKTARLIAAALKMGCEICQLSNEESNQIYKLGLKLGLIFQINDDIIDT
                     TMSEEQSGKPTNNDTHKNSFVNLLGLEQAIKTKENLLSECEQDLEKLNQKLAQMIQNL
                     IIQYL"
     gene            4646..6544
                     /gene="tkt"
                     /locus_tag="RTF91_001297"
     CDS             4646..6544
                     /gene="tkt"
                     /locus_tag="RTF91_001297"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDZ4944172.1"
                     /translation="MDIQILQEQANTLRFLSTDMVQKANSGHPGAPLGLADILSVLSY
                     HLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQLHSKTPGHP
                     EISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLSSDLIDHKIYCLCGDGDLQEGIS
                     YEACSMAGLHKLDNFILIYDSNNISIEGDVGLAFNENVKMRFEAQGFEVLSINGHDYE
                     EINQALEQAKKSTKPCLIIAKTTIAKGAGELEGSHKSHGAPLGEEIIKKAKEQAGFDP
                     NLSFYIPQASKIRFESALELGDLEEAKWKDKLEKSGKKELLERLLNPDFSKINYPDFK
                     GKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTELHGMGDFIEGKNIHFGIREH
                     AMAAINNAFARYGIFLPFSATFFIFSEYLKPAARIAALMKIKHFFIFTHDSIGVGEDG
                     PTHQPIEQLSTFRAMPNFLTFRPADGVENIKAWQIALNADIPSAFVLSRQKLKALNEP
                     VFGDVKNGAYLLKESKDAKFTLLASGSEVWLCLESANELEKQGFSCNVVSMPCFEIFE
                     KQDKTYQEKLLKGEIIGVEAACSNELYKFCHRVYGMESFGESGKDQDVFKHFGFSVSK
                     LVNFILSK"
     gene            6546..7655
                     /locus_tag="RTF91_001298"
     CDS             6546..7655
                     /locus_tag="RTF91_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaE family lipid ABC transporter permease
                     subunit"
                     /protein_id="HDZ4944173.1"
                     /translation="MNTDFRFQNNTFFIFGIWDKASIYKLKIKDFLTLIQSKEVIFDF
                     KDLEKIDTAGVRFFLALENDLKNKNIKITKQGLNSRFLTLFELCEKNYQRLNKTKKSH
                     KNFSEYFINLGKLSLELLKILREFINFTGAFFTSLFLCLKNPKNFRLIAFLYHIENSA
                     FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAG
                     RSASSYTAQIGVMKITDEIAAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISIV
                     GGMMIAKLNLDISFAEFLRRFREAVDIKHILIGLVKAPIFGFLIGLIACFRGFEVKNT
                     TQSIGIYTTKSVVNAIFWVIAFDALFSVVLTSAGI"
     gene            7656..8378
                     /locus_tag="RTF91_001299"
     CDS             7656..8378
                     /locus_tag="RTF91_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDZ4944174.1"
                     /translation="MVIKAQNIVTKFGEKIVHNGVSFEIKKNEIFGILGGSGSGKSVL
                     LKQMLMLEHFDNGEYEILGYKLKNINEEDALALRKRWGVVFQFAALFSFFNVYENIAI
                     PLKEYTHLDENCIQELVLMKLKMVGLNESVLKQFPSELSGGMQKRVAIARALALDSKL
                     LFLDEPTSGLDPHSSREFDDLVLELKKSFDLNIILVTHDKESMKNLLDRFIILENKKV
                     GFCGTYEELRMQNERLFKRFME"
     gene            8381..9271
                     /locus_tag="RTF91_001300"
     CDS             8381..9271
                     /locus_tag="RTF91_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HDZ4944175.1"
                     /translation="MENRANYFFVGLFVFGVFFASLGFILWLGGYSKKESFKYYEIHT
                     QESVAGLGIKAPVRLLGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQL
                     QGITGLKFVQLQGGSKNSKDLVSTHGKLPVIPFKESFLATIDKQSEHIFSLVKTADDK
                     SKELLSEKNLKNLEIFLQNLAELSANLNANSKNLSLNLSSASLKIGKMADNISLGAQN
                     FNSSLKDIKESATTLKNFIKKADAKLNTYDDIRVSLMQNLELFKQVLIESNILIEILQ
                     NSPSDLIFKETKPKLGPGEK"
     gene            9271..9870
                     /locus_tag="RTF91_001301"
     CDS             9271..9870
                     /locus_tag="RTF91_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HDZ4944176.1"
                     /translation="MLKQLFYILTFIFILYGCSLRHENINKNENIILKDEGIHPNIFL
                     KKTDKILKIRNTNAPLYLNSRAIIYIDNGFSNKYAHYFWGDLPSNLYSSLILSKFEQS
                     NIFTTLLSSTSSLNANYVLESRINSFEQILNGDENYAQISISVNFINLENNQIIAHKI
                     FNIKENIEKKDIRSTYNAFQKALNKIGNEIIFWVNSNLS"
     gene            9926..10426
                     /locus_tag="RTF91_001302"
     CDS             9926..10426
                     /locus_tag="RTF91_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944177.1"
                     /translation="MKSNLNIFKKHLGEIQGVNEFKANQICSQINDANDFIGALQVLD
                     MSLKKIEKSILERIDENSDDMQKRTLDATASQLIQNCSFMGTALFGNIFNVYVSKKLF
                     EFEIANPLLILQTSNYEGVLAYIQDKRDEIKTILSELATAITMGETMNNTGIYNSTMD
                     FKNLFK"
BASE COUNT         3962 a         1481 c         1768 g         3401 t
ORIGIN      
        1 aaaacaactt tttacgctta ttgataaaaa tttaaatctt ttaattaaaa atttaaatgc
       61 ccaagagtta aataattttt taaaagaata tttaagtttc ttaaaacatg aaaaaaatga
      121 agagaattta caacaatcat ttaaaaatct aagtagaatc ttccataaaa aaaactttac
      181 agcttatgat ttaagatttg atatacaaaa taatgacgaa cctttttaat ttatttaaat
      241 ttcaagcctc aatttacctt tttttaaaca caatcacgct aaagtatata aaaattttta
      301 aggataaatt atgatgcctt ttagtgatga agagcttata aatcctgtta aagcgagtct
      361 agaaaagagc ttacctatgc ttgaacgcga tggtggaggg cttgaatttt taggaattaa
      421 aaatggagtc gtttatgtcc atttaatagg agcttgcaag ggctgtacat caagtggaac
      481 aacactaaaa tacggccttg aaaggcaact aaaaattgac attcatccag aaatcactat
      541 agttaattta aatggcggag tagaagaatt tgcaaaatta taaaaaactt ggaattgagc
      601 atttttacaa aaaagatttt aaaactgcaa aaatgtattt ttttatggct tatgaaaaac
      661 gcaaaaataa acgcttactg aattttatct gtctttgcga tcttgctcta aaatccccta
      721 aagaggcttc cttgcttttt gacttttata tagaacacta caaaatctct aacattgata
      781 aagacctaga agaaatttta aatacgattg aatttaacaa acaagaaaat aaacaagaaa
      841 ttgaatttga agatggacac gcgttaaact atcaagattt tttaaaaagt gaagaagaac
      901 ttggttttca aaaaagcttt gaaaatatca tccatagcac taaattagtc attgataacc
      961 gcgatgattt tttggatttt ttagaaaaat tgcttgataa tggctataaa gatatgactt
     1021 taaattatat agaaaatgtt atgcctcatt tttgggcaaa tgacagattt ataaaacttc
     1081 aagaaaaact cataggattt aaaagtgaaa ttaaaacttg aaaattcatt tattacggat
     1141 aataccttag agtgtgaaaa agaatgcttt tttttacaaa ctacacaaaa tgctaaattt
     1201 catactcaag ccttagaaaa aggtgcaaaa atcattgatg taaatgagtg caaaaaactt
     1261 ttaaagattg atgaaaagat taaaatcata ggaatcacag gaaccaatgg caaaactaca
     1321 accgcagcag cgatttattc tatcttactt gatttaggtt ataaatgcgg actttgtgga
     1381 acaagagggg cctttatcaa cgatgagtca atcgatgaaa aaactctcac cacttcccct
     1441 atacttaaaa ccttagaata tctacaaata gccactcaaa aaaaatgtga ttttttcatc
     1501 atggaagtaa gctctcacgc tcttattcaa aaccgtattg aaggcttaaa atttgctgct
     1561 aaaattttta ccaatatcac tcaagatcat ttggattttc atggaaattt tgaaaattac
     1621 aaagaagcaa aagaactttt ttttactgat gaaagtttaa aatttatcaa caaagatgct
     1681 ttagctatta aatttaacgt gtgtaatgct tttacttatg gtatcgaaaa tccggctttg
     1741 tatcaaatca aagcttattc tttagaagaa ggtatcagtg ctattgcaaa gaataaagat
     1801 caaacttttc atatagactc tcccctgcta ggacttttca atctttataa tcttctagcc
     1861 gctagtgctt gcgtaaatga acttgctaag cctaatttaa aagatttaga aaaagctatc
     1921 agtggatttg gtggagtttg tggtagagta gagcaagtag caaaaggtgt gattgtggat
     1981 tttgctcata cgcctgatgg tattgaaaaa gtacttaaca cacttaaaaa taaaaaactc
     2041 atagtagttt ttggagcagg tggggataga gataaaacca aacgccctct aatgggaaaa
     2101 atcgtcgaac attttgcaaa aattgccatt attacaagcg ataatccacg cagtgaagaa
     2161 cccaaaacca ttatggaaga aattttattg ggctttaaaa aaaaagaaaa agttttaacg
     2221 atagaagata gaaaagaagc tataaaaaag gctttagaac tgaaagaaaa agacgattta
     2281 gtggttattt taggcaaggg tgatgaaact acacaagaaa ttaaaggggt aaaataccct
     2341 ttcagtgata aagtagttat taatgaaatt ttaaaaaatc aaggataatc aatgtttgaa
     2401 aatatggatt tttctaaaat gagtgaactt ttaaatcaag ttcaagaaaa agcaaaaaat
     2461 atagaactag aacttgcaaa tcgtgagttt agtgccaaaa gcggagcagg acttgtcaaa
     2521 gtaagcgcca atggaaaagg tgaaattatt gatgttagta ttgatgattc tttacttgaa
     2581 gataaagaat cattgcaaat tttacttatt tctgcgatca atgatgtttt agctatggtt
     2641 gcacaaaatc gctcaagtat ggcaaatgat gttttaggtg gttttggagg tataaaatga
     2701 tgagattgtt tttaattgtt tgtatgcttt ttactttgtc ttttggaata gaaagaccta
     2761 aatttgaaga ttttttagca ggttatgaaa gaaataaggc aagcatgctc aactatgaag
     2821 gaatgtcagc ttttgcgtta agcgaaaatt tacttgctgt tttaaaacaa cctaatacca
     2881 agcttaataa atatgtaaaa tacgatccat ttttaaattt atatcttgta agaactgact
     2941 ttagcttaat ccctactcct atgggagatg aagaaaagct tactcgtaat gattgggttg
     3001 gaatttggga tcctgataaa ccttatatag ggcatattaa gtatttagct caaaatatcg
     3061 atgaaaaaga tcaacttgat tttaattcta aaataggact tttagggact ccatgttgtg
     3121 aaatgatggg aattgcttta aataatagct cttttatagg caatcgctat ttaaaacatt
     3181 ttatgaaata taatgatgtt tattggggag atattggcgt tgattttgtt gttcgagaaa
     3241 ataaaattta tgttcataat gtaagaaaaa atccacaatt tttaatcaat gatcaaatta
     3301 taagcgttga tggtttgcct gccaatgatt taagaaaact caatgaaaaa attctttttg
     3361 cggatcgcgg aagcactctt tattttcaag tattgcgtga caatatggat ttaaatattt
     3421 ctactgaagt ctttgcaaaa gatttaagta aatttaacct tccagattcc aaaccaaaac
     3481 caaaaattac aaatttcaca agcaatcttg gtttaacagt taatactaat cttattataa
     3541 caaaaataga tccaaaatca aaagcatcaa atgcaggatt tatggtaggg gataaaattt
     3601 tacgcgttaa taatattatt ttaaataatt ttaaagaatt acaaaatatt ttaagcgctg
     3661 gtaatgactt tagcgtcttg attgaacgca aaagcaataa attacctcta tcaaatttga
     3721 acaacgaatt ggatggaaat gctaactcag gtggtgatgg taaatttcaa tttttcataa
     3781 ggcttactaa gtgaatttga aagaactttt tatccaccac ttggaaaaaa acctacctaa
     3841 agttgaaagc tttcatcctt tttttaatga agctttagca cttatgttaa aagcaggagg
     3901 aaaacatttt cgtgcacaac tacttttaag cgtagttcaa agcaataaac ccgagcttat
     3961 caatcaagcc cttgatgcag ccttagcttt agaatttatc catacctact cactcataca
     4021 tgatgattta ccctctatgg ataatgccga ctttagacga ggaatttcaa ccttacataa
     4081 aagctatgat gaaactacgg ctattttagt aggagatgct ttaaatactg aagctttttt
     4141 ggttttaagc cacgccaatt taaaagatga gatcaaaatc aaactcatca aaactcttgc
     4201 ttttaatgca ggacttaatg gaatggtgat agggcaagct attgattgtt tttttgagga
     4261 taaaagactc agtttaaatg aacttgagtt tttacataca cacaaaaccg caagattgat
     4321 cgctgcagct ttaaaaatgg gttgtgaaat ttgccaactt agcaacgaag aaagcaatca
     4381 aatttacaaa cttggtttaa agttaggact gatttttcaa atcaatgatg acattattga
     4441 tacaaccatg agcgaagagc aaagcggaaa gcctactaac aacgacactc acaaaaattc
     4501 ttttgtcaat ttacttggac ttgaacaagc tataaaaaca aaagaaaacc tccttagtga
     4561 atgtgagcaa gacttagaaa aactcaatca aaaactcgca caaatgatac aaaatttaat
     4621 aattcaatac ttataaaggt aaaaaatgga cattcaaatt ttacaagaac aggcaaatac
     4681 tctaagattt ttaagtacag atatggtgca aaaagcaaat tcaggacacc ctggtgcacc
     4741 tttaggttta gcagatattt taagcgtttt aagctaccat ttaaaacaca atccgaaaaa
     4801 tccaacttgg ctaaaccgtg atagactagt attttcaggc ggacatgcga gtgctttact
     4861 ttatagtttt ttacatttaa gtggttatga tttaagccta gaggatctta aaaatttccg
     4921 ccaacttcat tctaaaactc caggacaccc tgaaatttca actcttgggg tagaaattgc
     4981 tacaggtcct ttaggacaag gcgttgccaa tgctgtgggt tttgctatgg cagcaaaaaa
     5041 agcgcaaaat ttactaagca gtgatttgat cgatcataaa atttattgtc tttgcggaga
     5101 tggagattta caagaaggta tttcttatga ggcttgctct atggcaggac ttcacaaact
     5161 tgataatttc atacttattt atgatagtaa taatatctct atagaaggtg atgtaggctt
     5221 agcttttaac gaaaatgtaa aaatgcgttt tgaagcacaa ggttttgaag ttttaagcat
     5281 aaacggacac gattatgaag aaatcaatca agctttagaa caagctaaaa aatccacaaa
     5341 accttgtctt atcatcgcaa aaacaactat agcaaaaggt gcaggagaac ttgaaggcag
     5401 tcataaaagc cacggtgcac ctttgggtga agaaataatt aaaaaagcta aagaacaagc
     5461 aggctttgat ccaaatttaa gtttttatat accgcaagca agtaaaatcc gctttgaaag
     5521 tgctttagaa cttggagatt tagaagaagc aaaatggaaa gacaaacttg aaaaaagtgg
     5581 aaaaaaagaa cttttagaaa gacttttaaa tcctgatttt agtaagataa attatcctga
     5641 ttttaaagga aaagatcttg ccacaagaga tagcaacggc gaaattttaa atgttttagc
     5701 caaaaattta gaaggatttt taggcggaag tgcggatttg ggtccatcaa acaaaacaga
     5761 acttcacggt atgggagatt ttatagaagg taaaaatatt cattttggca tcagagaaca
     5821 cgctatggca gcgatcaaca acgcctttgc aagatatgga attttcttgc cattttcagc
     5881 aacttttttc atctttagcg agtatttaaa acctgctgca agaatagcag ctttaatgaa
     5941 aattaaacat tttttcatct ttacacacga tagtataggc gtgggcgaag atgggccaac
     6001 acatcaacct atagagcaac ttagcacctt tagagctatg ccaaattttt taacctttag
     6061 accagctgat ggggtggaaa atattaaagc ttggcaaata gctttaaatg ctgatattcc
     6121 aagtgctttt gtgctttcac gccaaaaact caaagctcta aatgagcctg tttttggaga
     6181 tgtaaaaaat ggagcatatt tacttaaaga aagtaaagat gctaaattta ctcttttagc
     6241 aagcggaagc gaagtttggc tttgtttaga aagtgcaaat gaacttgaaa aacaaggttt
     6301 ttcatgtaat gttgtttcta tgccttgttt tgagattttt gagaaacaag acaaaactta
     6361 tcaagaaaaa ttgttaaaag gtgaaattat aggcgttgaa gcagcatgct ctaatgaact
     6421 ttataaattt tgccacagag tttatggtat ggaaagtttt ggagaaagcg gtaaagatca
     6481 ggatgtattt aagcactttg gctttagtgt ttcaaagctt gtaaatttca ttcttagtaa
     6541 atagtatgaa tactgatttc agatttcaaa ataacacttt ttttatcttt ggaatttggg
     6601 ataaagcaag tatttacaaa ctaaaaataa aagatttttt aactttgatt caaagtaagg
     6661 aagtgatttt tgattttaaa gatctagaaa aaatcgatac tgcaggagta agatttttcc
     6721 ttgctttaga aaatgatctt aaaaataaga atattaaaat cactaaacaa ggtttaaatt
     6781 cacgcttttt aacccttttt gagctttgtg aaaaaaacta ccaaagatta aacaaaacaa
     6841 aaaaatcaca taaaaatttc agtgaatatt ttatcaatct tggaaaatta agtttagaac
     6901 ttttaaaaat tttaagagaa tttatcaatt ttacaggggc tttttttact agtctttttt
     6961 tatgccttaa aaatcctaaa aatttccgct tgattgcttt tttatatcat atagaaaatt
     7021 ctgcttttaa agccttgcct atagttatct taaccgctct tttggtagga gtggttttag
     7081 cctatcaagc ggcttatcaa cttgcacaat ttggagccaa tattttcata gtggatttaa
     7141 tgggaatttc agccactaga gaacttgccc ctttaatagc tgctatagtg atcgcaggaa
     7201 gaagtgcaag ctcttacact gcccaaattg gagtgatgaa aatcactgat gaaattgcag
     7261 ctatgaatac catgggtttt cgttcttttg aatttatcat tattccacgt gttatggctt
     7321 tggtagtggc tatgccctta atcgttgcca ttagtgacgc aatcagtatt gtaggtggaa
     7381 tgatgattgc gaaattaaat cttgatattt cctttgctga atttttaaga cgctttagag
     7441 aagccgtaga tataaaacat atcctcatag gacttgtaaa agcgccgatt tttggatttt
     7501 taataggtct tattgcttgt tttcgtggtt ttgaggttaa aaacactaca caaagtatag
     7561 gaatttatac tacaaaaagt gttgtcaatg ctattttttg ggtgatagct tttgatgctt
     7621 tattttctgt tgttttaact tctgcaggaa tttaaatggt cattaaagca caaaatatcg
     7681 ttacaaaatt tggagaaaaa atcgttcata atggtgtaag ttttgaaatc aaaaaaaatg
     7741 aaatttttgg tattttagga ggcagtggaa gcggaaaatc cgtactttta aaacaaatgc
     7801 ttatgctcga acattttgat aatggagagt atgaaatttt aggctataaa ctcaaaaata
     7861 tcaacgaaga agatgctctt gctttgcgta aaagatgggg tgtagttttt cagtttgcgg
     7921 ctctttttag cttttttaat gtttatgaaa atatcgccat tcccttaaaa gaatatactc
     7981 atttagatga aaattgtata caagaactgg ttttaatgaa actaaaaatg gtgggtttaa
     8041 acgaaagtgt tttaaaacaa tttccaagtg aacttagtgg cggtatgcaa aaaagagtgg
     8101 ctatagctag agctttggca cttgatagca aactactttt tttagatgaa cccacttcag
     8161 gacttgaccc tcatagcagt cgtgaatttg acgatttagt tctagagtta aaaaaaagtt
     8221 ttgatttaaa tatcattttg gttacgcatg ataaagaaag tatgaaaaat ttactcgatc
     8281 gctttatcat tttagaaaat aaaaaagttg gattttgtgg tacttatgaa gaattacgca
     8341 tgcaaaacga aagacttttt aagagattta tggagtaaaa gtggaaaata gagcaaatta
     8401 tttttttgta ggactttttg tttttggggt attttttgca agccttggat ttatactttg
     8461 gcttggtgga tactctaaaa aagaaagttt taagtattat gaaattcaca cacaagaatc
     8521 cgttgcagga cttggtataa aagcacccgt aagacttttg ggagtggaag taggtagtgt
     8581 agaggaaata agcatttata atcaagatga actcggcgtt aatatacgca tcaaagtcaa
     8641 aaacaacacc cctataaaag aagatacttt tgccacttta caacttcagg gtatcacagg
     8701 acttaaattt gttcaacttc aaggcggaag taaaaatagc aaagatttgg tatctacaca
     8761 cggaaaactt ccagtcattc cttttaaaga aagttttcta gcaactatag acaaacaaag
     8821 tgaacatatt ttttctttag ttaaaacagc cgatgataaa tcaaaagagc ttttaagcga
     8881 aaaaaatctt aaaaatctag aaatcttttt gcaaaattta gcagaactca gtgcaaattt
     8941 aaacgctaat tctaaaaatt taagtcttaa tctttcaagt gccagtttaa aaataggaaa
     9001 aatggcagat aatataagtc ttggtgcaca aaattttaac tctagtctta aagacataaa
     9061 agaaagtgca acgactttaa aaaatttcat aaaaaaagcc gatgcaaaat taaataccta
     9121 tgatgatata agggtatctt tgatgcaaaa tttagaactt tttaaacagg ttttaattga
     9181 aagcaatatt ctaatagaaa ttttacaaaa tagcccctct gatttgattt ttaaagaaac
     9241 taaacctaaa ctaggaccag gagaaaaata atgctaaagc aattattcta tattttgacc
     9301 tttattttta tactatatgg gtgctcttta agacatgaaa acatcaataa aaatgaaaac
     9361 atcatattaa aagatgaagg aatacacccg aatatttttt taaaaaaaac tgataaaatt
     9421 cttaaaattc gcaacacaaa tgcaccttta tatttaaact cgcgagccat catttatata
     9481 gataatggtt ttagcaacaa atacgcacat tatttttggg gagatttgcc aagcaatctt
     9541 tattcttctt tgattttgtc gaaatttgaa caaagcaata tttttacaac cctactttct
     9601 tcaacaagct ctttaaatgc aaattatgtc cttgaaagca gaattaattc ctttgaacaa
     9661 attcttaatg gcgatgaaaa ctacgctcaa atttccataa gtgtaaattt tataaatctt
     9721 gaaaataatc aaataatagc tcataaaatt ttcaatatca aagagaacat agaaaaaaaa
     9781 gatatccgct ctacctacaa tgcttttcaa aaagccttaa ataaaattgg caatgagata
     9841 attttttggg taaattctaa tttatcttaa tttaggaaca ctttttgctt tttaaatatt
     9901 tagtaatatt tttgaaaggt aaacaatgaa aagtaattta aatatattta aaaaacactt
     9961 aggtgaaatt caaggcgtga atgaatttaa agcaaatcaa atttgctctc aaataaatga
    10021 tgcaaatgat tttataggag cacttcaagt acttgatatg tctttaaaaa aaatagaaaa
    10081 aagcattcta gaaagaatag atgaaaattc agatgatatg caaaaaagaa ctcttgatgc
    10141 aacagcatca caacttatac aaaattgctc tttcatggga acggctcttt ttgggaatat
    10201 ttttaatgtt tatgtcagta aaaaactttt tgaatttgaa attgctaatc cacttttaat
    10261 ccttcaaaca agtaattatg aaggtgtgtt agcttatata caagataaaa gagatgaaat
    10321 aaaaactatt ctatcagaat tagcaaccgc aattactatg ggcgaaacca tgaataatac
    10381 tggaatttat aattctacaa tggattttaa aaatttattt aaataagaat agtaatcgtt
    10441 tgttctcttt aagcaaatat aatatatttt agcttaaaga gattttccaa actcaaaaga
    10501 gagttagact atgaataaaa aaaaggggga gggaaatagc ctaactcaac gagatcttaa
    10561 aaaatctctc taaactaaaa tagatattta aataatttaa caatttttat ta
//
LOCUS       DAPWAA010000051        10014 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.051, whole genome shotgun sequence.
ACCESSION   DAPWAA010000051 DAPWAA010000000
VERSION     DAPWAA010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10014)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10014)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10014
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.051"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(5..766)
                     /gene="proB"
                     /locus_tag="RTF91_001303"
     CDS             complement(5..766)
                     /gene="proB"
                     /locus_tag="RTF91_001303"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDZ4944178.1"
                     /translation="MKRIVIKVGSHVISEENTLSFERLINLVEFLIKLMEKYEVILVT
                     SAAISAGHTKLDIDRKNLINKQVLAAIGQPFLISVYNELLAKFNKIGGQILLTGKDFY
                     SSKATKHAKNAIDAMINLGILPIINENDVTAIEEIVFGDNDSLSACATYFFDADLLVI
                     LSDIDGFYDKNPREFKDAKRLQKVDFVPQIWLETGAKAGSEHGTGGIVTKLKAAKFLL
                     ERDKKMFLASGFDLDVAKAFLLENQQRGGTLFENI"
     gene            complement(905..1951)
                     /gene="obgE"
                     /locus_tag="RTF91_001304"
     CDS             complement(905..1951)
                     /gene="obgE"
                     /locus_tag="RTF91_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HDZ4944179.1"
                     /translation="MFIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDI
                     IFVCDNNTHTLVNFKGKRELRAQNGVGGMGRNKNGKKGENLELIVPEGTQVIDAQTNE
                     ILLDLTKEGQRELFLKGGKGGLGNTHFKHATNQRPDYAQPGIKGEIRLVRLELKLIAD
                     VGLVGFPNVGKSTLISVVSNAKPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIE
                     GASGGKGLGLAFLKHIERTSFLLFVLDPMREMLLKEQFIVLRKELEKFSNELFRRKFG
                     IMVSKSDSVNLGEEFAKQIALNISELENYLKEINSPQSFLIKVSSLEKTGLKELKFML
                     LEEIKALRNTNNKN"
     gene            complement(2059..2313)
                     /gene="rpmA"
                     /locus_tag="RTF91_001305"
     CDS             complement(2059..2313)
                     /gene="rpmA"
                     /locus_tag="RTF91_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDZ4944180.1"
                     /translation="MAHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTA
                     THAGNNVGMGKDHTIFALIDGFVKFERKDKNRKKVSVYPA"
     gene            complement(2324..2632)
                     /gene="rplU"
                     /locus_tag="RTF91_001306"
     CDS             complement(2324..2632)
                     /gene="rplU"
                     /locus_tag="RTF91_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDZ4944181.1"
                     /translation="MYAIIKHSGKQYKVSVGDELKLDHFEAESKTSIEVSEVLAINDK
                     ELKVGAPFVAGAKVVLEVINHGKDKKVVIYKKRRRKDSKLKRGFRRQFTRVVVKDIKA
                     "
     gene            complement(2931..3554)
                     /gene="lpoB"
                     /locus_tag="RTF91_001307"
     CDS             complement(2931..3554)
                     /gene="lpoB"
                     /locus_tag="RTF91_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HDZ4944182.1"
                     /translation="MKKTKFLGAALVGALLFSGCAQTVYTDGKASQVKKGDALTLGLD
                     RQDYESAAETMIASMLSDPAFANIKPGARKVIAMGRVVNDTPQRIDTEKLTAKITSAL
                     RKSGKFVLTSAVAAGGALDSMSEDVRELRNNDEFNQKTIAKKGTLVSPDFSLAGKIRQ
                     DNVKLSNGKTQVEYFFLLRITDLSSGLVYWEDEQTIDKTGSSKSVTW"
     gene            complement(3577..3945)
                     /locus_tag="RTF91_001308"
     CDS             complement(3577..3945)
                     /locus_tag="RTF91_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HDZ4944183.1"
                     /translation="MKKIILFILMFLLGACAPSYQINSSQNTVILDSNLPKSLVKQFQ
                     KRVNNNGYLEFEVILRSTFAKDIIYKVDWLDKDGFVLRDILNEDYQAFRIPAEQEVIL
                     RKLSPDIRAKDFRLEIKAKN"
     gene            complement(3956..5317)
                     /locus_tag="RTF91_001309"
     CDS             complement(3956..5317)
                     /locus_tag="RTF91_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944184.1"
                     /translation="MKIKARLILSGVICFFLTACVNQVKQNTTFENVLAQKYCSDDFF
                     NQNLEKIKKNDDVIYTGLNAGLIARNCGDFNKSNVFFDAAEESYKYDVDLENVSSKVV
                     KFVGTTLFNDNIVDYDGSLYERIMVNVYKALNYMEEDDYENARVEFNRALIRQDKAKE
                     YFAKEIEQNRQDLEKAKEDKNYNKNMNENSKVIKAQYDNLFKEFDTTKNFINPYATYL
                     ASVFFFMDKDYRKAADLFREVAIIYPKNKTIEKEAKIFKEYAAKIKVKKAKKYIFVVY
                     ENGFGAIKDEFVLTLPFIVDKKIISTNIALQTLKKRESSFANLNINGQNTNDFVDLDN
                     IVATEFKINMPTMITKALAQTIVKTTLNVAVANNDSTGGWLSLVTAVATAVTNKADVR
                     SWRGLPKSIAIATIENDGNLEIQDPQGNVLFQKSLDKNKNALVVVRSFAPYLPTSVAV
                     IEK"
     gene            complement(5415..6752)
                     /locus_tag="RTF91_001310"
     CDS             complement(5415..6752)
                     /locus_tag="RTF91_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDZ4944185.1"
                     /translation="MDIMIILQVIVFLGAIFIGIRLGGIAIGYAGGLGVVILGLVLGM
                     KPGNIPWDVILIIAAAIAAISAMQQAGGLDYMVRVTEKILRSSPKFINYLAPACGWLL
                     TILAGTGNAVFSLMPVVVDVAKSQNIKPSVPLSLMVVSSQIGITASPVSAAVVYMSGV
                     LEPLGWNYPTLIGIWISTTFIACMFTAFIVSLITPMDLSKDTVYQERLKIGLVKDCGA
                     ILHGEDKPGAKLSVGIFLITVLAVVLYATAISSNIKWIDPVVVPRDAAIMSFLLTAAT
                     LITWLCKVEPGKILDTSVFKSGMTACVCVFGVAWLGNTFVAGHESSIKEVAGEWVKQT
                     PAMLAVAFFFASMLLYSQAATAKAIVPVIITALGISAANPHDSYMLVACFAAVSALFV
                     FPTYPTLLGAVQMDDTGTTRIGKFIFNHSFFIPGVLAIAIAVVLGFVLAPMLI"
     gene            complement(6768..8174)
                     /gene="aspA"
                     /locus_tag="RTF91_001311"
     CDS             complement(6768..8174)
                     /gene="aspA"
                     /locus_tag="RTF91_001311"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HDZ4944186.1"
                     /translation="MGTRKEHDFIGELEISDEVYYGVQTFRAVENFDISHDRLKDFPR
                     FVRALARVKKAAAMANHELGLLDKNIQDAIIKACDKILEGGYYDQFVVDMIQGGAGTS
                     TNMNANEVIANIGLELMGHKKGEYQYLHPNDHVNLSQSTNDAYPTALHLALHDYLSDL
                     AKAMEHLKKAYERKAEEFKDILKMGRTQLQDAVPMTLGREFKTFAVMIGEDIQRVLEA
                     RKLILEINLGGTAIGTGINSHPDYPKVVERKIREVTGFEYTVAEDLIEATQDTGAYVQ
                     ISGVLKRVATKLSKVCNDLRLLSSGPKCGLNEINLPKMQPGSSIMPGKVNPVMPEVVN
                     QVCYFVIGADVTVTFACEGGQLQLNVFEPVAAYSLFNSIVMLEKAMYTLADKCIDGIT
                     ANEKICSDFVYNSVGIVTALNPYIGYENSASIAKEAMNTGKRVGDIVLERGLLSKEQI
                     DEILTPSNMLNPHMEAKK"
     gene            8408..9103
                     /gene="ung"
                     /locus_tag="RTF91_001312"
     CDS             8408..9103
                     /gene="ung"
                     /locus_tag="RTF91_001312"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDZ4944187.1"
                     /translation="MEKITINIDKIKINDDWKEFLKDEFQKKYFLEIKKQYLNAINQH
                     ITIYPPANLTFNAFNLCPLKEVKIVILGQDPYHQPNQAMGLSFSVPKDIKIPPSLDNI
                     FKELQNDLNITPAKSGDLSPWARQGVLLLNSILSVEANKAASHSSWGWQEFSDAVIHK
                     LSNEKSGLVFMLWGNYAKSKEILIDNTKHLILKAAHPSPLARTGFLGCKHFSKANNFL
                     KKMDKFPIDWNIV"
     gene            9213..9905
                     /locus_tag="RTF91_001313"
     CDS             9213..9905
                     /locus_tag="RTF91_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HDZ4944188.1"
                     /translation="MKTIGIIGGMSFESTITYYKIINQAINDKLKSLNSAKILLYSVN
                     FEEIEILQKQDKWQEAAQILSECAKKLELAGVDFIIITTNTMHKVFDEIQKSINIPVL
                     HIAKSTAKALKQENIQKVGLLGTKYTMTQDFYKKILEEENISTIIPSDEDIKIVHDII
                     FNELCKGEIKQESKEKYLNIIKKLQAMGAKGVVLACTEIGLLVSKNDTNINIFDTSII
                     HALDAANEALKD"
BASE COUNT         3408 a         1824 c         1315 g         3467 t
ORIGIN      
        1 taacttatat attttcaaat aaagtcccac ctctttgttg attttctagc aaaaatgctt
       61 tcgctacatc taagtcaaaa ccactagcta agaacatttt tttatcacgc tcaagcaaga
      121 atttcgctgc tttaagctta gttactatcc cacctgttcc gtgttcgctg cccgctttag
      181 cacccgtttc aagccaaatt tgtggcacaa aatccacctt ttgcaagcgc ttagcgtctt
      241 taaattctct aggattttta tcgtaaaatc catcaatatc acttaaaatg acaagtaaat
      301 ctgcatcaaa aaaatatgtg gcacaagcgc ttaagctgtc attatcacca aaaacaatct
      361 cttctatagc tgtgacgtca ttttcgttaa taataggcaa aatccctaaa tttatcatcg
      421 catcgatggc attttttgcg tgtttggtag ctttactgga gtaaaaatct ttacctgtaa
      481 gtaaaatttg tcccccaatt ttgttaaatt ttgccaaaag ctcattataa acactgatta
      541 aaaaaggttg cccaatggcg gctaaaactt gtttgttgat gagatttttt ctatcgatat
      601 ctagtttggt atgtcctgct gaaatcgctg ctgaagtcac taaaatcact tcatattttt
      661 ccataagctt aattaaaaat tctaccaaat ttattaaacg ctcaaaactt aaagtgtttt
      721 cttcgctaat tacatgagag cctactttaa taactattct tttcatattt gttccttgaa
      781 aaaattttat aattttaact aaaattataa atcatatttt agttttaaaa aggctcaaag
      841 cttgatgaga aattatctat gtagatacag taatttcgga tccattttta ggagttttaa
      901 gtctttaatt tttattgtta gtatttctta aagccttaat ctcttctaaa agcatgaatt
      961 taagctcctt aagtcctgtt ttttcaaggc ttgaaacttt gattaaaaag ctttgagggc
     1021 tgtttatctc tttaagataa ttttctaatt cacttatatt taaggcaatt tgcttagcaa
     1081 attcttcacc taaatttacg ctatcgcttt ttgaaaccat aatcccaaat ttacgcctaa
     1141 aaagttcatt ggaaaatttt tcaagctctt ttcttaacac gataaattgc tcttttaaaa
     1201 gcatttctct cataggatct agcacaaaaa gtaaaaagct tgttctttct atatgtttta
     1261 aaaaagcaag tcctaaacct ttacctccac ttgctccttc aataatccct ggaatatccg
     1321 ccataacaaa tgaattatac tcatctacat ctacaagtcc aagttttgga gtaagagtgg
     1381 taaattcata atttgcaatt tcaggtttcg cgtttgaaac gacgcttata agggtagatt
     1441 ttcctacatt tggaaagccc acaagcccta catcggcaat aagtttaagt tcaagtctaa
     1501 ctaagcgaat ttctcctttt ataccaggtt gtgcgtaatc aggacgttga ttggtagcat
     1561 gtttaaaatg tgtattacca agtccgcctt ttccaccctt taaaaaaagt tctctttggc
     1621 cttctttggt aagatcaagt aaaatttcat tagtttgtgc atcaataacc tgcgttcctt
     1681 caggtactat gagttctaaa ttttcaccct ttttgccatt tttattacgc cccattccac
     1741 caacaccatt ttgtgcacgc aattctcttt tgcctttaaa atttacaaga gtatgggtgt
     1801 tattgtcgca tacgaaaata atatcacctc catttccacc atcgccacca tcaggaccgc
     1861 caagtggaac atgcttttca cgacgaaaac ttacagcacc cttaccacca tcgcctgaag
     1921 ctaaagtaat tttaacacta tcaataaaca tttataattg cctttgactt taaatttata
     1981 aagctaaatt ttgagtaaaa aagaagttaa atttataaat ttaaagtttt taagacgcca
     2041 aaaagcgtcc taaaaacttt atgcaggata tacagaaact ttttttctgt ttttgtcttt
     2101 tctttcgaat tttacaaaac catcaatcaa agcaaagata gtatgatcct ttcccatacc
     2161 tacattgtta cctgcatgag ttgcagttcc tctttggcgg ataatgatat ttccggctct
     2221 aacaaattct ccaccaaatt ttttaacacc taaacgacga cctatagaat cgcggttatt
     2281 ttgagttgaa ccttgacctt tcttgtgtgc cattttttac tccttaagct ttgatatctt
     2341 ttactacaac gcgagtaaat tgtcttctaa aaccgcgttt gagtttagaa tcttttctac
     2401 gtcttttttt gtaaatcaca acttttttat cttttccgtg gttaatcact tccaaaacaa
     2461 cttttgcacc tgctacgaaa ggcgcaccta cctttaattc tttatcattg atagcaagaa
     2521 cttcacttac ttcaatgctt gttttgcttt cagcttcaaa gtgatctagt tttagctcat
     2581 cgccaacact tactttgtat tgctttccgc tgtgtttgat aatagcatac attgcttttc
     2641 cttataaatt tggtagtacc ataaagcacc gtgatacgga tttaaaagct ttagtggttt
     2701 aataaaattt cgattctaca gaatttttct ttaattttta atgaatttaa gaaaaagttt
     2761 agagtttgaa aaaatcaaac tctataatag cagcacttaa caccggttaa ttacgtaagt
     2821 ttaaaatttg atcaaccttt tatcgccttt tggcaacttc atttatcctt tgtaaaatat
     2881 cataaaaagc tcaaattcaa taaaacttga gccaaatttt aattaaactc ttaccaagtc
     2941 actgatttac tagaacctgt tttatcgata gtctgctcat cctcccaata aaccaaaccc
     3001 gaacttaaat cagtaattct taacaaaaaa aagtattcta cttgggtttt accattgcta
     3061 agttttacat tatcttgtct gattttgccc gcaagagaaa aatcaggcga cacaagtgta
     3121 cctttttttg ctatagtttt ttgattaaac tcatcattat ttcttaactc tcttacatct
     3181 tcgctcatgc tatcaagtgc tccacctgca gcaactgccg aagttaaaac aaattttccc
     3241 gattttctta acgcagaagt aatttttgca gttagttttt cagtatcaat tctttgcggg
     3301 gtatcattta ccactctacc catagcaata acttttcttg cacctggctt aatatttgca
     3361 aaagctggat cgcttaacat gctagctatc atagtttcag ccgcactttc ataatcttgt
     3421 ctatcaagac ctaaagttaa agcatcgcct ttttttactt gacttgcctt tccgtctgta
     3481 taaactgttt gtgcacaacc gctaaaaagt aaagctccaa caagagctgc tcctaaaaat
     3541 tttgtttttt tcatgattta tccttacaaa ataagattaa tttttcgctt taatttctaa
     3601 tctaaaatcc ttcgctctta tatcaggtga taatttacga agaattacct cttgttctgc
     3661 tggaattcta aaggcttgat agtcctcatt taaaatatct cggagtacaa aaccatcttt
     3721 atccaaccaa tccactttat aaattatatc tttagcaaaa gtgctgcgta aaatcacttc
     3781 aaattctaaa taaccattgt tatttacacg tttttgaaat tgtttgacta aactttttgg
     3841 taaatttgaa tctaaaatta cggtattttg acttgaattt atttgataac ttggcgcaca
     3901 agcaccaagt aaaaacatta aaataaataa aataattttt ttcatctttt cagccttatt
     3961 tttctataac agcaacactt gtgggtaagt atggagcaaa agaacgcact accacaagag
     4021 catttttatt tttatctaat gatttttgaa acaaaacgtt accttgtgga tcttgaattt
     4081 ctaaatttcc atcattttct atcgttgcta tagcaatact ttttggtaaa cctctccaag
     4141 aacgcacatc agctttgttt gttacagcag tcgctactgc cgttacaaga cttagccaac
     4201 cacctgtaga atcattgttt gcaacagcta catttaaagt agttttaact atagtttgag
     4261 ctaaagcctt ggtaatcatt gttggcatat ttattttaaa ttctgtagca acaatattat
     4321 ctaaatctac aaaatcattt gtattttgac catttatatt taaatttgca aaagaagatt
     4381 ctcttttttt caaggtttgt aaagcaatat ttgtgctaat aattttttta tccactataa
     4441 aaggtaaagt taaaacgaac tcatctttaa ttgcaccaaa tccattttca taaaccacaa
     4501 aaatatattt tttagctttt ttaaccttta ttttcgcagc atattcttta aaaattttag
     4561 cttctttttc gatagtttta ttttttggat aaataatagc tacttctcta aataaatccg
     4621 cagcttttct atagtcttta tccataaaga aaaataccga agcaagataa gttgcataag
     4681 gattgatgaa attttttgtt gtatcaaatt ctttaaataa gttatcatat tgtgctttta
     4741 taacttttga attttcattc atatttttat tataattttt atcttctttt gctttttcca
     4801 aatcttgacg attttgctca atttctttag caaaatattc ttttgcctta tcttgacgta
     4861 ttaaagcacg attaaattca acccttgcat tttcataatc atcttcttcc atataattta
     4921 gggctttata tacattaacc ataattcttt catacaaaga accatcataa tcgactatat
     4981 tgtcattaaa taaggttgta ccaacaaatt taactacctt agaacttaca ttttctaaat
     5041 ccacatcata tttataggat tcctctgcag cgtcaaaaaa cacgttgctt ttattaaaat
     5101 cgccacaatt cctagcaatt aaacctgcgt ttaatcctgt ataaataaca tcatcatttt
     5161 ttttgatttt ttctaaattt tgattgaaaa aatcatcact gcaatatttt tgtgctaaaa
     5221 cattttcaaa tgttgtattt tgtttgacct gattaacaca agctgtcaaa aaaaagcaaa
     5281 taacacctga caaaatcaac ctagccttta tcttcactaa attcctttct taaagaaaat
     5341 taaaaatgaa tattatagcg tagtgcatac ttaaaaactt aatgaaaata accctaggaa
     5401 aacctagggt ttgattaaat aagcatagga gctaaaacaa agcctaaaac tacagcaatt
     5461 gcaatagcta aaactcctgg tataaagaaa gagtggttaa aaataaattt accaattcta
     5521 gttgttcctg tatcgtccat ttgtacagcg ccaagcaagg ttggataagt tggaaataca
     5581 aaaagcgccg aaaccgctgc aaaacaagct acaagcatat aagaatcatg tggatttgct
     5641 gctgaaattc ctaaagcagt gataataaca ggcacaatag cctttgcagt cgctgcttga
     5701 gaatataaaa gcatacttgc aaagaaaaac gcaactgcta gcatagcagg agtttgtttt
     5761 acccattcac ctgctacttc tttaatagaa ctttcatgtc ctgcgacaaa agtgtttcca
     5821 agccatgcca caccaaaaac acaaacacaa gcagtcatac cacttttaaa tacactggta
     5881 tcaagtattt tacctggttc aaccttgcaa agccaagtga tcaaagttgc cgcggtaagc
     5941 aaaaagctca tgatagccgc atctcttgga actacaacag gatcaatcca tttgatatta
     6001 cttgaaattg cagttgcata aagtacaacc gctaaaacag tgatgagaaa aattcctact
     6061 gaaagtttag cacctggttt gtcttcgcca tgcaaaatag ctccgcaatc tttaacaagt
     6121 cctattttta agcgttcttg ataaactgta tctttgctta aatccatagg agtgattaaa
     6181 ctcactataa aagctgtaaa catacaagct ataaaagttg tgctgatcca aattccaatt
     6241 aaagttggat aattccatcc aagtggttct aaaacaccac tcatataaac tacagctgca
     6301 ctcacaggag aagcagtaat tccaatttgc gaagaaacaa ccatgagtga aagtggaacg
     6361 ctaggtttta tgttttgaga ttttgcaaca tcaactacaa caggcattaa agaaaatacc
     6421 gcatttcctg ttcctgctaa gattgtaagc aaccatccgc aagctggagc tagatagttt
     6481 ataaatttgg ggcttgatct taaaattttt tccgttaccc taaccatata atcaagtccg
     6541 cccgcttgct gcatagcaga aattgctgca atagctgcag caataattaa aataacatcc
     6601 caaggaatat tacccggctt catacctaag acaagtccta gtataacaac accaagtccc
     6661 ccagcataac ctatagcaat accacctaag cgaataccaa taaaaatcgc cccaagaaag
     6721 acgattactt gcaaaattat cattatatcc atttaaattc ctaaatgcta ttttttagct
     6781 tccatatgag gatttagcat atttgatgga gttaaaattt catcaatttg ctctttgctt
     6841 aaaagccctc tttcaagtac aatatcaccc actctttttc cggtattcat tgcttcttta
     6901 gctatagaag ctgaattttc atagccaatg taaggattta aagctgttac tatgcctact
     6961 gaattataga caaagtctga acaaattttt tcatttgcag taataccatc tatacattta
     7021 tcagctaaag tatacattgc tttttctagc attacaatag aattaaataa gctataagct
     7081 gcaactggtt caaaaacatt aagttgtaat tgtccgcctt cgcaagcaaa agttacagtt
     7141 acatctgctc caataacaaa ataacaaact tgattaacta cttcaggcat aacaggattt
     7201 accttacctg gcatgataga acttcctggt tgcatttttg gaagattaat ctcattaaga
     7261 ccacattttg gaccgctgct taaaagtctt aagtcattac acactttaga aagtttcgtt
     7321 gcaacgcgtt ttaaaacacc tgaaatttgt acataagctc ccgtatcttg ggttgcttcg
     7381 atcaaatctt cagccacagt gtattcaaaa cctgttactt ctcttatttt tctttctaca
     7441 acttttggat aatcaggatg agagttaatt cctgttccaa tagcagttcc acctaaattg
     7501 atctctaaga tcaattttct agcctctaaa actctttgta tatcttcacc tatcatcaca
     7561 gcaaaagttt taaactcgcg acctaaagtc ataggcacag catcttgaag ctgagttcta
     7621 cccattttca atatatcttt aaattcttca gcttttcttt cataagcttt ttttagatgc
     7681 tccatagctt ttgctaaatc acttaaataa tcatgtaaag caagatgtaa agctgtagga
     7741 taagcatcat tggtactttg acttaaatta acatgatcat ttggatgaag gtattggtat
     7801 tcaccttttt tatgacccat aagttcaagt cctatatttg ctataacttc attagcattc
     7861 atatttgtac ttgttccagc tccgccttgg atcatatcca caacaaattg atcataatat
     7921 ccgccttcta aaattttatc acacgcttta ataattgcat cttggatatt tttatctaaa
     7981 agacctagtt catgatttgc catagctgca gcttttttta ctctagctaa agctctaaca
     8041 aaacgaggaa aatcctttaa tctatcatga gaaatatcaa aattttcaac agctctaaaa
     8101 gtttgcactc cataataaac ctcatcagaa atttccaatt ccccaataaa atcatgttct
     8161 tttcttgtgc ccatttaaac ctttcataaa aaatattaga taatgatatt acattttagt
     8221 taataattag ttaataaata aactacttta caaatacaat aaataagtat ttttatatcc
     8281 taatttatgt ctttatattt aatttttgtt aacataaaga ttttatttat tttaaaaaaa
     8341 ttaatatatt tttgcaagct tttttgttaa aataaaattt ttaataattt aaataatcag
     8401 gaataatatg gaaaaaatta caataaacat agataagatt aaaataaatg atgattggaa
     8461 agaattttta aaagatgaat ttcaaaaaaa atatttccta gaaatcaaaa aacaatatct
     8521 aaacgcgatt aatcaacaca ttaccattta tccacccgca aatttaacct ttaatgcctt
     8581 taatttatgt cctctaaaag aagttaaaat tgttatctta gggcaagatc cttatcatca
     8641 gccaaatcaa gcaatgggac ttagtttttc agttccaaaa gatataaaaa tcccaccaag
     8701 ccttgataat atttttaaag agctgcaaaa tgatttaaat atcactccag caaaaagcgg
     8761 agatttaagc ccttgggcaa gacaaggcgt tttactttta aactctattc ttagtgttga
     8821 agcaaacaaa gcagcaagtc atagctcatg gggctggcaa gaatttagcg atgctgtaat
     8881 acacaaatta agcaatgaaa aatcgggact tgtttttatg ctttggggaa attatgcaaa
     8941 aagcaaagaa attttgattg ataatactaa acatttgatt ttaaaagcag ctcacccaag
     9001 tcctttagct agaacgggat ttttaggttg taaacatttc tcaaaagcta ataatttctt
     9061 aaaaaaaatg gataaatttc ctatagattg gaatatagtt taaaaaatta ttttaaattt
     9121 taaaacatat tcattgaatt taaaaataaa ctataattta tataaataca ttataataaa
     9181 acggctcaaa aatttaattc ttaaggaaaa aaatgaaaac tattggcatt ataggcggaa
     9241 tgagttttga aagtactatt acttattata aaataataaa tcaagctata aatgataaat
     9301 taaaatcttt aaattccgca aaaattttac tttatagtgt taattttgaa gaaatagaaa
     9361 ttttacaaaa gcaagataaa tggcaagaag ctgcacaaat tttaagcgag tgtgctaaaa
     9421 aattagaact tgcaggagtt gattttataa taattacaac caataccatg cataaagttt
     9481 ttgacgaaat tcaaaaaagt ataaatatcc ctgtacttca catagcaaaa agcactgcta
     9541 aagctttaaa acaagaaaat atacaaaaag ttggattatt aggtactaaa tacacgatga
     9601 cgcaagattt ttataaaaaa atacttgaag aagaaaatat tagcactatt attcctagtg
     9661 atgaggacat aaaaatcgtt catgatatta tttttaatga gctttgcaaa ggtgaaatta
     9721 aacaagaatc caaagaaaaa tatttaaaca ttatcaaaaa attgcaagct atgggtgcaa
     9781 aaggggtggt tttagcttgc actgaaattg gtttattggt atctaaaaat gatactaata
     9841 tcaacatttt tgatacaagt attatccacg cccttgatgc tgctaatgaa gctttaaaag
     9901 attaattttt ctttttttat aaaaggaata atttctacta acacaaaaaa tgatacataa
     9961 taaattccac agcaaaaatt aataaaacta tgataatttt taaacttctt tcta
//
LOCUS       DAPWAA010000052         9975 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.052, whole genome shotgun sequence.
ACCESSION   DAPWAA010000052 DAPWAA010000000
VERSION     DAPWAA010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9975)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9975)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9975
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.052"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..216
                     /locus_tag="RTF91_001314"
     CDS             <1..216
                     /locus_tag="RTF91_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944189.1"
                     /translation="LNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIQAQEN
                     ALMKNIPPLEEKLKERKLDKWMKKVRK"
     gene            213..1184
                     /gene="legB"
                     /locus_tag="RTF91_001315"
     CDS             213..1184
                     /gene="legB"
                     /locus_tag="RTF91_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,6-dehydratase LegB"
                     /protein_id="HDZ4944190.1"
                     /translation="MKNILVTGADGFIGSHLCESLIKKGFKVRALSQYNSFNFWGHLE
                     KSAFLKDMEVISGDLRDSFFCEKITKNIDAIFHLGALIAIPYSYIAPQSYVDTNVNGT
                     LNMLEAAKKNEISHFIHTSTSEVYGTALYVPIDEKHPLQPQSPYSASKIAADMMALSY
                     YNSFNLNVNIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDT
                     CEGFISLLSLKHFGEVYNIGSGVEHSMQEVLDLIQKILNSKVEIIQDKQRLRPKHSEV
                     FRLCCDSSKLKKATNWQSKINLEEGLKQSIEYFKENLQAYKSEIYNV"
     gene            1177..2370
                     /gene="legC"
                     /locus_tag="RTF91_001316"
     CDS             1177..2370
                     /gene="legC"
                     /locus_tag="RTF91_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase LegC"
                     /protein_id="HDZ4944191.1"
                     /translation="MFEKEISFIKSLFNKENIPLHEPCFIGNEKKYLLECIDSGFVSS
                     VGEFVSRFEEALKEKTNARFVIATNTGTAALHIALLANSIDENCEVITQSISFVATAN
                     AIAYTGARAVFLDIDENTLSLSPKALENFLENHTYQKDGFTYNKTTHQCIKACVVMHT
                     FGLSAHIKAIKELCEKYNIILIEDAAEALGSTYENKALGTFGKCGILSFNGNKIITGG
                     CGGAILSDDKNLAKLARHLSTTAKIPHTYEYNHDMIGYNYRLCNVNAAILLAGLENLE
                     LFLENKRELAKIYKDFFKNNDKCKFIDEKSNEKSNFWLNTLLFKDENLRNVFLEECLK
                     NNIFARPVWKSLPSLKAFQNCQSDELINTKNLEKRLVNLPSSVRIMQDYDQNKTRNER
                     DYDLL"
     gene            2357..3478
                     /locus_tag="RTF91_001317"
     CDS             2357..3478
                     /locus_tag="RTF91_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl sugar amidotransferase"
                     /protein_id="HDZ4944192.1"
                     /translation="MIYCDYCVMPNTRPGIKFIKDKEGKNICSACINHKNKENINYQA
                     RFKELENLCDKYRRMNGKFEYDCAIAVSGGKDSHFQVHIMKEKLGMNPILFSVEDNFT
                     MTEAGKKNLKNLSETFGCHIISLKPDIKTQKKVMLKTFEKYGKPTWFIDRLIYSYPFA
                     MALKFNTPLLVYGENVSYEYGGSDAQETPSAKEIFLNGVANDLDINEFLDDEIKEENL
                     QLFFNPSKDEFDKLDPIYLSYFVKWNSYRNYIFAKSRGFTDLEGEWDRTMCAENFDQV
                     DSIGYILHAWMKYPKFGHACASDYAARFVRYGLLNRKEAVELVQKRDHKLDNKCVEDF
                     CNFIGISKTTFWKIVEKHYNMDLFYKNDFGEFKLKNKLK"
     gene            3495..4172
                     /locus_tag="RTF91_001318"
     CDS             3495..4172
                     /locus_tag="RTF91_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDZ4944193.1"
                     /translation="MQNSLETYAMKYDKNGYGLLFPDGHVVRFYERILKYKLNKTSGN
                     LLDFGCGNGVHSAYFQSKGFKTFGIDIVPSLKEIWKQNISSGGGYCKIIEPNSSIKGL
                     FDENMDIIFANQSLYYIPPKELKRNILEFYELLNNDGIIFATMMSKKNYYFSHSQEQQ
                     KNGLSKVEISGRLNEISFIHFIDKAEDLENLFQPFETLFLGDYDPINFYNFEGSAHHY
                     IYIGIKK"
     gene            4214..5218
                     /gene="neuB"
                     /locus_tag="RTF91_001319"
     CDS             4214..5218
                     /gene="neuB"
                     /locus_tag="RTF91_001319"
                     /EC_number="2.5.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase"
                     /protein_id="HDZ4944194.1"
                     /translation="MKKTLIIAEAGVNHNGDVNLAKKLIEIAASAGADFVKFQSFKAK
                     NCISIKAKKAAYQLKTTASDENQLQMVQKLELSPKAHQELISHANKCGIAFLSSPFDL
                     ESIELLNELGLNIFKIPSGEITNLPYLKKIAKLNKKIILSTGMANLSEIEEALNILYK
                     NGTKRQNITLLHCTTEYPAPFNEINLKAIQTLKDAFKLDVGYSDHTQGIHISLAAVAL
                     GACMIEKHFTLDKNMSGPDHKASLNPDELKMLCTQIRQIEKAMGDGIKKASKSEQKNI
                     SIVRKSLVAKKDIQKGEKFNHENLTTKRPANGISAMRYEEFLSKIATKNYKKDELICE
                     "
     gene            5211..6365
                     /gene="legG"
                     /locus_tag="RTF91_001320"
     CDS             5211..6365
                     /gene="legG"
                     /locus_tag="RTF91_001320"
                     /EC_number="3.2.1.184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-N,N'-diacetylbacillosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HDZ4944195.1"
                     /translation="MSKRKICLVSATRAEWYLLRNLCYEIQNDKDLSLQIIATGAHLS
                     PEFGLTYKEIEKEFKITKKIPILLASDDKISLCKSMSLAFSAFSEAFENLKPDIVVIL
                     GDRYEMLSVASVCLLMHLPLVHLCGGELTLGAIDDSIRHSISKMSHLHFVSHEIYKKR
                     LLQLGEEEERVFNIGSLASAIIKNMNFLSKEDLEKALEMKFNKEIYLITYHPLTLNAK
                     NSQKEIKSLLKKLDTLKNASLIFTKANADENGLLINEILQNYCQKNPHKAKLFDNLGS
                     QKYLSLMKMAKAMIGNTSSGISESPFFKTPCINIGDRQKGRLKTQNIIDCEINELDQA
                     FKKLKSKAFKQRLKNFKNPYENDKNPNHIIKTCIKNVNLDTILHKNFIDL"
     gene            6374..7399
                     /locus_tag="RTF91_001321"
     CDS             6374..7399
                     /locus_tag="RTF91_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HDZ4944196.1"
                     /translation="MDVNKLKLTLNSSIEEALKIVGQERVRLGIVVDKKDKFLGVISD
                     SNIRKALIHGKTLKDSIKDIYTKNPITIKENMGKEELLKLSAKTDIYDFPVLDNKGKI
                     LFIKSISSLLKANTNSIIIMAGGLGSRLKELTKDTPKPMLKVGKKPILESIVQRLKSQ
                     NFENFIFCVNYKKQIIEDYFRKGQKFGVKISYIKERKKLGTAGALSLIKQKFKESFIV
                     MNADILTELDFNALLKAHKKSKALMSVCVREFKQQIPYGVITQKQGFIENIEEKPTQK
                     FLVSAGIYVLENEILNLIPKNEYLDMPELIKLVMQKGRVNTYIINDYWIDIGRIDEFL
                     KANEDFE"
     gene            7396..8301
                     /gene="ptmF"
                     /locus_tag="RTF91_001322"
     CDS             7396..8301
                     /gene="ptmF"
                     /locus_tag="RTF91_001322"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamine-D-fructose-6-phosphate isomerase
                     subunit"
                     /protein_id="HDZ4944197.1"
                     /translation="MKILIIGFGNIGKQHFLALKNLNHQISILSSSAKEDEYEKIQIY
                     RSLKECNLNTFDLFIIANITTEHFKTLKTLDELVKDKIILVEKPLFEKTLEFKSFKNK
                     IFVAYLLRFHPVILTLKELLKDEKIYFANFVCNSYLPHWRTLDYKKNYSAKKELGGGV
                     LLDLSHEIDLAFFLFGDLELEYSQNAKISELCITSDDFAFLALKNSQETKIHIELDYF
                     SKFNKREINIHTLEKSLKADLIHNKIEIYHKDKSRECLNFKNDTIKTLQNLQKAVFQN
                     DKQLCDIKQALKVLEICDEVRKQNG"
     gene            8294..9001
                     /locus_tag="RTF91_001323"
     CDS             8294..9001
                     /locus_tag="RTF91_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar modification protein B"
                     /protein_id="HDZ4944198.1"
                     /translation="MAEILCTICARGGSKGVKNKNIRKINDLEMIAYSIIQAQNSKLF
                     KHIVISTDSDEIASIAKKYGAEVFFKREAHLADDKAAKLPVIRDALLRSEEYFKTCFE
                     ILVDLDASAPLRSSLDIKNAYESFIKNNNSNLITAVPARRNPYFNLIEIQDGKICKSK
                     EGNFTTRQSAPKCYDMNASIYIFKRDFLLQNDSVFGEKTGLFVMDESTAFDIDSELDF
                     KIVEFLISSKNLSPKDF"
     gene            9001..9771
                     /locus_tag="RTF91_001324"
     CDS             9001..9771
                     /locus_tag="RTF91_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDZ4944199.1"
                     /translation="MLENKIIFVAGACGRIGKALCKKILNHKGIPILADINKQCLKEL
                     QKDLEQNFKTKLLSLELDITQQESLQFSLKKSKEKYGKIDAFVNSSYPYGKNWGKTPY
                     YELKYEQICESLNLHLAGFMLAAQEFVKFFKKQGYGNIIHLSSIMGVYAPKFENYKGT
                     NMQSSLEYSVIKAGINHMGVWLAKELFNQNIRVNTLASGGILDNQNELFLKAYRNCCA
                     SKGMLDADDVCGTLVFLLSDESKFITGQTLVVADGWGL"
     gene            9759..>9975
                     /locus_tag="RTF91_001325"
     CDS             9759..>9975
                     /locus_tag="RTF91_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944200.1"
                     /translation="MGTLMILTQTQKDLFNKNIKAFNNTLLKESLKQIQTSKFELVLG
                     KDNLDINLKDTSNNTFLYENVIDELNNM"
BASE COUNT         3902 a         1407 c         1608 g         3058 t
ORIGIN      
        1 cttaatcttg ctagaattta tgttttaaat cctaaaacca aagaagatgc ttttaataaa
       61 agtattcttt ggataaaaga acatttagaa tttatggagc tagtttacgg acatatccaa
      121 gcacaagaaa atgctttgat gaaaaatata cctcctttag aagaaaaact taaagaaaga
      181 aaattagata aatggatgaa aaaggtgaga aagtgaaaaa tattttagta acaggtgctg
      241 atggtttcat aggttctcat ctttgtgaaa gtttaataaa aaaaggtttt aaagttaggg
      301 ctttaagtca gtataattct tttaattttt ggggacattt agaaaaaagt gcctttttaa
      361 aagatatgga agttatcagc ggggatttaa gagatagctt tttttgcgaa aaaatcacca
      421 aaaacataga tgcaatcttt catcttggtg ccttaattgc tataccttat tcttacatag
      481 ccccacaaag ctatgtagat actaatgtaa acggcacttt aaatatgcta gaagcagcaa
      541 aaaaaaatga aatttcgcat tttatccaca cctcaacaag tgaagtttat ggcacagcct
      601 tatatgtgcc tatcgatgaa aaacatcctt tacaacctca aagcccatac tctgctagca
      661 aaatcgccgc tgatatgatg gcgctaagtt attataattc ttttaattta aatgtaaata
      721 tagcgcgccc ttttaatacc tatgggccaa gacaaagtgc aagagctatc atacccacca
      781 ttatcacaca aattttaagt ggagcaaagg aaattaaact aggcgattta agtccaaaaa
      841 gggatttaaa ttttgtactt gatacttgcg agggttttat ttccctttta agtttaaaac
      901 attttggaga ggtttataat ataggctcag gtgttgagca ctccatgcaa gaagtgttag
      961 atctcataca aaaaatttta aattctaagg tagaaatcat ccaagataaa caaagactac
     1021 gtcctaaaca tagtgaggtt tttagacttt gttgcgattc aagcaagctt aaaaaagcta
     1081 caaattggca aagcaaaata aacttagaag aaggcttaaa acaaagcata gaatatttta
     1141 aagaaaattt acaagcttat aaaagtgaga tttacaatgt ttgaaaaaga aatttctttt
     1201 ataaaaagcc tttttaataa agaaaacatt cctttacatg agccttgttt tataggcaat
     1261 gagaaaaaat accttttaga atgtatagat agcggttttg tttcaagtgt aggagaattt
     1321 gtatcgcgtt ttgaagaagc tttgaaagaa aaaaccaatg cacgctttgt tatcgctaca
     1381 aatacaggca ctgcagccct tcacatcgct ttactagcta atagtatcga tgaaaactgt
     1441 gaagtcatca ctcaaagcat aagctttgtt gctacagcaa atgctattgc ttacacagga
     1501 gctagggctg tttttttaga tattgatgaa aatactttga gtttaagtcc taaggcttta
     1561 gaaaattttt tagaaaatca cacctatcaa aaagatggct ttacttataa caaaaccaca
     1621 catcaatgca tcaaagcttg cgtggtaatg catacttttg gtttaagtgc tcatatcaaa
     1681 gctataaaag aactttgcga aaaatacaac atcatcttaa tcgaagatgc tgcagaagct
     1741 ttaggaagta cttatgaaaa caaggcttta ggcacttttg gaaagtgtgg aattttaagt
     1801 tttaatggaa ataaaatcat cacgggcgga tgcggtggag caatactaag cgatgataaa
     1861 aatttagcta aacttgcaag acatcttagc accacagcta aaattcccca tacttacgaa
     1921 tacaatcatg acatgatagg ttataattac cgtctttgta atgtcaatgc agcaatctta
     1981 ctcgcagggc ttgaaaattt agaactcttt ttagaaaaca aaagagaact tgctaaaatt
     2041 tataaggatt tttttaaaaa taatgataaa tgcaaattca tcgatgaaaa aagtaatgaa
     2101 aaaagtaatt tttggctcaa taccctactt tttaaagatg aaaatttaag aaatgtattt
     2161 ttagaggaat gtttaaaaaa caatattttc gcgcgtcctg tatggaaaag tttaccaagt
     2221 ttaaaagctt ttcaaaactg tcaaagcgac gaacttataa acaccaaaaa tttagaaaaa
     2281 cgcttggtaa atttacctag tagcgttaga ataatgcaag attatgacca aaataaaact
     2341 agaaatgaga gagattatga tttattgtga ttattgcgta atgccaaata ctagacctgg
     2401 tattaaattt ataaaagata aagaaggtaa aaatatttgt tcagcttgta tcaatcataa
     2461 aaataaagaa aatattaact atcaagcaag atttaaagaa cttgaaaatt tatgtgataa
     2521 atatcgcaga atgaatggaa aatttgaata tgattgtgct atagctgtaa gcggaggtaa
     2581 agattcgcat tttcaagtgc atatcatgaa agaaaaactt ggaatgaatc ctattctttt
     2641 tagtgttgaa gataatttta ccatgactga agcaggtaag aaaaatctta aaaatttaag
     2701 cgaaactttt ggttgtcata tcatcagttt aaaacctgat atcaaaactc aaaagaaagt
     2761 tatgctaaaa acctttgaaa aatacggaaa acctacttgg tttatcgata gattaattta
     2821 cagttatcct tttgccatgg ctttgaaatt taacacacct ttactagttt atggagaaaa
     2881 tgttagctat gagtatgggg gtagcgatgc tcaagaaact cctagtgcta aagaaatttt
     2941 tctaaatggc gttgccaatg acttagatat aaatgaattt ttagatgatg aaatcaaaga
     3001 agaaaattta caactctttt tcaatccaag caaagatgaa tttgacaaac ttgatcctat
     3061 ttatctaagt tattttgtaa aatggaattc ttatagaaat tatatttttg caaaaagtcg
     3121 cggttttacc gatctagaag gtgaatggga taggacgatg tgtgcagaaa actttgatca
     3181 agttgatagc ataggttata ttctacatgc ttggatgaaa tatcctaaat ttggccatgc
     3241 ttgtgcaagt gattacgcag ctcgttttgt gcgttatgga cttttaaata gaaaagaagc
     3301 tgttgaactt gtgcaaaaaa gagatcataa acttgataat aaatgcgtcg aagatttttg
     3361 caactttata ggtattagca aaactacatt ttggaaaata gtagaaaaac attataatat
     3421 ggatttattt tacaaaaacg attttggaga atttaaatta aaaaataaat taaaataaaa
     3481 tataaaggaa aaaaatgcaa aattcattag aaacttatgc aatgaaatat gataaaaatg
     3541 gatacggatt actttttcca gatggccatg tagtacgttt ttatgaaaga attttaaaat
     3601 ataaactcaa taaaacaagc ggcaatctgc ttgactttgg ctgtggcaat ggagtgcatt
     3661 cagcttattt tcaaagcaaa ggatttaaaa ctttcgggat agatatagtt ccaagtctaa
     3721 aagaaatttg gaagcaaaat attagcagcg ggggggggta ttgtaaaatt atagaaccaa
     3781 attctagtat caaaggactt tttgatgaaa atatggatat tatctttgca aatcaaagtc
     3841 tttattatat acccccaaaa gaactcaagc gaaatatttt agaattttac gaacttttaa
     3901 ataatgatgg aataattttt gctacaatga tgagcaaaaa aaattattat ttttcacata
     3961 gccaagaaca acaaaaaaat ggtttgagta aagttgaaat tagcgggaga ttaaatgaaa
     4021 taagctttat acattttatt gataaagctg aagatttaga aaatcttttt caaccttttg
     4081 aaactttatt tctaggagat tatgatccta ttaattttta taattttgaa ggatcggcac
     4141 atcattacat ttacataggt attaaaaaat aaaatttttt gcctttattt taaggcaaaa
     4201 taaaggcaaa attatgaaaa aaactctcat tatcgcagaa gcaggagtca atcacaatgg
     4261 tgatgtaaat ttagctaaaa aacttataga aatcgcagct agtgcaggag ctgattttgt
     4321 taagtttcaa agctttaaag caaaaaattg tatcagtata aaagctaaaa aagcggctta
     4381 tcaactcaaa accacagcta gcgatgaaaa ccaacttcaa atggtacaaa aacttgaact
     4441 aagtcctaaa gcacatcaag aattaatttc tcatgcgaac aaatgcggta ttgcctttct
     4501 ttccagtcct tttgatcttg aaagtataga acttttaaat gagctagggc ttaatatttt
     4561 taaaatccca agtggagaaa tcaccaatct accctatctt aaaaaaattg caaaacttaa
     4621 taaaaaaatc atactttcaa ccggaatggc aaatttgagc gaaatagaag aagctttaaa
     4681 tatactttac aaaaatggta ccaaacgcca aaatatcaca cttttacact gcactacaga
     4741 ataccctgct ccttttaatg agatcaatct taaagccata caaaccctaa aagatgcctt
     4801 taagcttgat gtgggatatt ctgatcatac tcaaggcata catatttcct tagctgctgt
     4861 tgcactagga gcttgcatga tagaaaaaca ttttacttta gataaaaaca tgtcaggacc
     4921 tgatcataaa gccagcttaa atcctgatga gttaaaaatg ctttgcactc aaataaggca
     4981 aatagaaaaa gccatgggtg atggtataaa aaaagcaagc aaaagtgaac aaaaaaatat
     5041 aagcatagta agaaaaagtt tagtagctaa aaaagacatc caaaaaggcg aaaaattcaa
     5101 tcatgaaaat cttaccacta aacgcccagc aaatggcata agtgctatga gatatgaaga
     5161 atttttaagc aaaattgcta ctaaaaatta taaaaaagat gagcttatct gtgagtaaaa
     5221 gaaaaatttg cttagtaagt gccacaagag ctgaatggta tcttttaaga aatttatgtt
     5281 atgaaattca aaatgataaa gacctaagtc ttcaaatcat cgctacagga gcacatttaa
     5341 gtcctgaatt tggacttacc tataaagaaa tagaaaaaga atttaaaatc actaagaaaa
     5401 tccctatctt gcttgcaagt gatgataaaa taagcctttg caaaagtatg agtttagctt
     5461 ttagtgcttt tagtgaagct tttgaaaact taaaacctga tatagttgtc attttaggag
     5521 atcgctatga aatgcttagc gtggctagcg tgtgtctttt gatgcactta cctttggtgc
     5581 atttatgcgg cggggagcta actttaggag ctattgatga tagtataaga catagcattt
     5641 caaaaatgtc gcatttgcat tttgtaagtc atgaaattta taaaaaaaga cttttacaac
     5701 ttggagaaga agaagaaaga gtttttaata taggttcttt agcctctgct atcataaaaa
     5761 atatgaattt tttaagcaaa gaagatttag aaaaagcctt ggaaatgaaa tttaataaag
     5821 aaatttatct aatcacttat catcctttaa ccttaaatgc aaaaaacagc caaaaagaaa
     5881 tcaaaagcct gcttaaaaaa cttgatactc ttaaaaatgc aagtttgata tttaccaaag
     5941 caaatgctga tgaaaatgga cttttaatca atgaaatttt acaaaactac tgtcagaaaa
     6001 acccacacaa agccaaactt tttgataatc ttggctcgca aaaataccta agtcttatga
     6061 aaatggccaa agctatgata ggtaatacct caagtggtat tagcgaaagt ccttttttta
     6121 aaaccccttg tattaatata ggcgatagac aaaaggggcg tttaaaaact caaaacatca
     6181 ttgattgtga aattaatgaa ctagatcaag cttttaaaaa attaaaaagc aaagcattta
     6241 aacaaagatt aaaaaatttc aaaaaccctt atgaaaatga taaaaatcca aatcatatca
     6301 taaaaacttg cataaaaaat gtaaatttag atacaatctt gcataaaaat ttcatcgatt
     6361 tataaggctt ggcgtggacg taaacaaact taaactcacc cttaattcta gcatagaaga
     6421 agctttaaaa atagttggac aagaacgcgt cagactaggt attgtagtag ataaaaaaga
     6481 taaatttcta ggcgtaatta gcgattcaaa cattagaaaa gctttaattc atggtaaaac
     6541 tttaaaagat agcatcaaag atatttatac taaaaatcct atcaccataa aagaaaacat
     6601 gggtaaagaa gagcttttaa aactttctgc taaaacagat atttatgatt ttcctgtttt
     6661 agataataaa ggaaaaattc ttttcataaa atccatctca tcacttttaa aagctaacac
     6721 aaactccatt attatcatgg ctggaggctt aggttctcgc ttaaaagaac tgaccaaaga
     6781 tactccaaaa cctatgctaa aagtgggtaa aaaacctatt ttagaaagta tagtccaaag
     6841 acttaaaagc caaaattttg aaaattttat tttttgtgtg aattataaaa aacaaatcat
     6901 agaagattat tttcgaaaag ggcaaaaatt tggggttaaa atttcttata tcaaagagcg
     6961 taaaaaactt ggcacagcag gagctttaag tcttataaaa caaaaattta aagaaagctt
     7021 catcgttatg aatgcagaca ttttaactga gcttgatttt aatgctcttt taaaagcaca
     7081 taaaaaatca aaagccttaa tgagcgtttg cgtgcgtgaa tttaaacaac aaattcctta
     7141 tggtgtcatc actcaaaaac aaggttttat agaaaatata gaagaaaaac ctactcaaaa
     7201 attccttgta agtgcaggaa tttatgtgct tgaaaatgaa attttaaatt taattcctaa
     7261 aaatgagtat ttagatatgc cagaacttat taagctagtt atgcaaaaag gtagggtaaa
     7321 tacctatatc attaatgatt attggatcga tattggacgc atagatgagt ttttaaaggc
     7381 caatgaggat tttgaatgaa aattttaatc ataggctttg gcaacatagg caaacagcat
     7441 tttttagcct taaaaaattt aaatcatcaa ataagcatac tttcttcaag cgctaaagaa
     7501 gatgaatatg aaaaaattca aatttatcgc tctttaaaag aatgcaactt aaatacattt
     7561 gatcttttta tcattgctaa tatcactaca gaacatttta aaacgctaaa aactcttgac
     7621 gaactcgtaa aagataaaat catactagta gaaaaacctt tatttgaaaa aactcttgaa
     7681 tttaaaagtt ttaaaaataa aatttttgta gcgtatttac tgcgttttca tcctgtaatt
     7741 ttgactctaa aagagctttt aaaagatgaa aaaatttatt ttgctaattt tgtttgtaat
     7801 tcttatttac ctcattggag aactttagac tataaaaaaa actatagtgc taaaaaagag
     7861 ttaggtggtg gtgttttgct cgatctttct catgaaatcg atctagcttt ttttcttttt
     7921 ggggatttag agcttgaata ctctcaaaat gctaaaattt cagaactttg catcacaagt
     7981 gatgattttg catttttagc tttaaaaaat tcacaagaaa caaaaattca tatagaatta
     8041 gactattttt ctaaatttaa taaaagagaa atcaacattc atactttaga aaaaagtctt
     8101 aaagccgatt tgatacacaa taaaatcgaa atttatcaca aagacaaaag tcgagaatgc
     8161 ttaaatttta aaaatgatac aataaaaaca cttcaaaact tacaaaaagc agtttttcaa
     8221 aatgataaac agctttgcga tatcaaacaa gctttaaaag tgcttgaaat ttgcgatgaa
     8281 gtaaggaaac aaaatggctg aaattttatg caccatttgt gctaggggtg gtagcaaagg
     8341 tgttaaaaat aaaaacatta gaaaaatcaa cgatcttgaa atgatagctt atagcatcat
     8401 acaagcacaa aattccaagc tttttaagca tatagttata agcactgata gcgatgagat
     8461 agcaagcata gctaaaaaat acggcgcgga agtttttttt aaaagagaag ctcaccttgc
     8521 agatgataaa gccgctaaac ttccggtcat acgtgatgct ttacttagga gtgaagaata
     8581 ttttaaaacc tgctttgaaa tcctagtaga cttagatgct tcagctccgt tgcgttcaag
     8641 tcttgatata aaaaatgctt atgaaagctt tattaaaaac aataattcca atctcatcac
     8701 cgcagttcct gctagacgta atccttattt caatctcata gagatacaag atggtaaaat
     8761 ttgcaaatct aaagaaggaa attttactac ccgtcaaagt gcaccgaaat gttatgatat
     8821 gaatgcgagt atttatattt tcaaaagaga ttttttactg caaaacgata gtgtttttgg
     8881 tgaaaaaaca ggactttttg tcatggatga aagcacggct tttgatatag atagtgagct
     8941 agattttaaa atcgtagaat ttttaatctc ttcaaaaaat ttatcaccaa aggattttta
     9001 atgcttgaaa ataaaatcat ctttgtagca ggagcttgcg gacgtatagg taaagcactt
     9061 tgcaaaaaaa tacttaatca caaaggcatc cctatacttg cagatattaa caaacagtgt
     9121 ttaaaggagc ttcaaaaaga tttagaacaa aattttaaaa caaaacttct aagcttagag
     9181 cttgatatta ctcagcaaga aagtttgcaa tttagcctta aaaaaagcaa agaaaaatac
     9241 ggtaaaattg atgcttttgt aaattcaagc tatccttatg gtaaaaactg gggtaaaaca
     9301 ccttattatg aacttaaata cgaacaaatt tgcgaaagtt taaatttaca tctagcaggt
     9361 tttatgctag ccgctcaaga atttgttaag ttttttaaaa aacaagggta tggcaatatc
     9421 atccatctta gctctatcat gggagtttat gcacctaaat ttgaaaacta taaaggcaca
     9481 aatatgcaaa gttccttaga atacagcgtg ataaaagcag ggattaatca catgggcgtt
     9541 tggcttgcta aagaactttt taatcaaaat atacgcgtaa atactctagc aagtggtgga
     9601 attttagaca atcaaaatga acttttttta aaagcttata gaaattgttg cgcaagcaaa
     9661 ggtatgctag atgcagatga tgtgtgtgga actttagtat ttttgctcag cgatgaaagt
     9721 aaatttatta caggacaaac cttagtcgta gcagatggat ggggacttta atgattctca
     9781 ctcaaaccca aaaagacctc tttaataaaa acatcaaagc tttcaacaac actcttttaa
     9841 aagagagttt aaaacaaatt caaacaagta aatttgaact tgttttaggt aaagataatc
     9901 ttgatataaa tttaaaagat acaagtaata acacctttct ttatgaaaat gttatagatg
     9961 aattaaataa tatgc
//
LOCUS       DAPWAA010000053         9621 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.053, whole genome shotgun sequence.
ACCESSION   DAPWAA010000053 DAPWAA010000000
VERSION     DAPWAA010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9621)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9621)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9621
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.053"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..442
                     /locus_tag="RTF91_001326"
     CDS             <1..442
                     /locus_tag="RTF91_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="potassium transporter TrkA"
                     /protein_id="HDZ4944201.1"
                     /translation="KEKKAFFDLKIPIMKVGEASFDELKEAIILSADENELENNANVI
                     TDLSKQLDFGVILYYYNPNSQNTTDMEEYFRSLSKLYDKNIQIINKNDENPLLNLQYR
                     EDLLQFVSFQKELLNGDFGRNLSTNLNRHYYKMRQNYQLFIPVE"
     gene            487..1542
                     /locus_tag="RTF91_001327"
     CDS             487..1542
                     /locus_tag="RTF91_001327"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDZ4944202.1"
                     /translation="MQVEVKLKENAYKVYIDELEELEFDTKVFILSNPKVSGLHLKTL
                     LFKIKAKEIFITTVKDGEEYKNLSTVEEILNQMFNSKLDRKSVLISFGGGVISDMGGF
                     VASIYQRGIDFINIPTTLLACVDAAVGGKTGVNNAFGKNLIGTFCQPKAVYCESTFLK
                     TLGPRELAAGMAEFIKMAVMFDESILNFIESIDEKSFLNVTCKNEIFTQIIAKSIELK
                     TRIVEQDEKESGLRMLLNYGHTFAHVIENFTDYKLYLHGEAVAIGMIMANQLALNLRI
                     LDQMQSQRIKDILLKFNLPISYKINNVDEFYEAFFMDKKSSNRKINFVLPSALGKGLI
                     KDDISKKDIIATLREFQ"
     gene            1539..2348
                     /locus_tag="RTF91_001328"
     CDS             1539..2348
                     /locus_tag="RTF91_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944203.1"
                     /translation="MKKIVILTFFVVFANWIIININEKINTSNTVISDSISNIRYENF
                     IKYQDINDELIVLNFNLKKTSDVHQQEELKRKIANLEDQLSLFKELIEFKPNVENIEV
                     LKASDKKLKEFEQALNFASVSYSVYEKKIGEELSWVSAEIKVQSLRVVNTLVIVIAMA
                     FMLKFITKKYIKDNERYYIATKIINFINIIFLILLFAYIENIAYLITILGFTYAALVL
                     SMIGKEIVKEFNKYKDTKIAYLSQNLYLGILAQNYFEQYHENAYFYARNKD"
     gene            2345..3598
                     /gene="mtaB"
                     /locus_tag="RTF91_001329"
     CDS             2345..3598
                     /gene="mtaB"
                     /locus_tag="RTF91_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HDZ4944204.1"
                     /translation="MKEKVFFKTFGCRTNIYDTELLKSYVKDYEIINNEDKAQIIVIN
                     SCTVTNGADSGIKSYINTMQKKGIKVILTGCGAVSKGKEFLDKKQVFGVLGASNKDKI
                     NEFLGAKTSFYELGNLNFIDKDIVCEYENHTKAFVKIQEGCDFACSYCIIPSVRGKSR
                     SVDEKTLLKQVEILGANGYSEIVLTGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRL
                     GSLEPAQIDESFLEILDEAWLERHLHIALQHTSEKMLRIMRRRSHTDNDLRLFNIIAS
                     KGYALGTDFIVGHPGESVEIWEEALKNFKEFSLTHIHAFIFSPRNNTHSATMKDVING
                     TLAKERLNVLKSIVEKNNYNFRKKFQVPLEILVENQKEDYFEGYDQFFNKIKIKSDKD
                     ITKEWIIVSQYEVQEKFNFANLKAR"
     gene            3598..5214
                     /locus_tag="RTF91_001330"
     CDS             3598..5214
                     /locus_tag="RTF91_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HDZ4944205.1"
                     /translation="MKNKKIILASFMVLCILFGILYYKNESKYIDENLYQSLLSQNLI
                     QKAVIDKDEIWLKAEGENYVIIKDGVDIKTLLAKVPVEVRKDNTFWVFFILFVFIIAL
                     LISFSYFARKKELAKYPISNKNQNHTQTQNSNINLESSHIKPVISNITFNDVAGVDEV
                     KMELSELVDFLQNPRKYKEFGIKMPKGVLMIGPPGVGKTLIAKAVAGEAGVPFFYQSG
                     SSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNVERDSTLNQLL
                     TQMDGFEDNNGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMKD
                     KNNNVNLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVLNKVLLGKK
                     KILSFNDEEKEIQATYQAAKALSAYYFDIGFEKITLIEDRFKEYEHNIRSKSELINRI
                     KVYLSGSRAMKLIYNESYTNSQDDFLKIKELLDYMLSFDMLEEANLSEQKKEMDEFLS
                     SMKDKILKLSEFLLEKEKIEHDDVKNIMQV"
     gene            complement(5223..5639)
                     /locus_tag="RTF91_001331"
     CDS             complement(5223..5639)
                     /locus_tag="RTF91_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HDZ4944206.1"
                     /translation="MKIKFLSITAILSIFLNADIIISADNLPNISKEFLQHNFKAPIG
                     IVQKDKNSYEVYLSDGTEVEFDIDGTWKEIENKTFPFNLDFLPQNLVNIIKNEFPNVK
                     AREIERKINYFKIKLDNDVKILIDLNGTILYKEIDD"
     gene            5736..6248
                     /locus_tag="RTF91_001332"
     CDS             5736..6248
                     /locus_tag="RTF91_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDZ4944207.1"
                     /translation="MLTIFLIFLNILCYFLISYDYYNIFGLNILFFNGAYWQLLSSMF
                     LHGNLTHLVLNMIVLFQFGRILESYLGSLYFIFLYLVGGLLCSLLSAFYVYFDFKYFG
                     GNANLIGASGAICVLMGFYAVLDKNSTKGLIVAILLMSFAPLLMGVNVAWYGHIFGFI
                     CGYILAKIKR"
     gene            6250..6762
                     /locus_tag="RTF91_001333"
     CDS             6250..6762
                     /locus_tag="RTF91_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDZ4944208.1"
                     /translation="MKKIYIIRHAKASKNEDIDDFKKKLTKSGKQDLKKLFKNLASYE
                     IHPDLVLSSPAVITAKTAKKIAKFYNFDKNKICFDERLYLCDVENLLKILRDINDEFN
                     EVFLVGHNPALMELGELLSSLCLASFPTSSVLCLEFDIKKFKNLKKHSGKLVFFEHVR
                     KLKEEKDLGF"
     gene            complement(6777..8645)
                     /gene="rpoD"
                     /locus_tag="RTF91_001334"
     CDS             complement(6777..8645)
                     /gene="rpoD"
                     /locus_tag="RTF91_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDZ4944209.1"
                     /translation="MNAKTQETELEELFQENAKDYITYEKLVKYLTKQPSASTAKKVQ
                     ALMKKHKVQLFSAAEIAQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRS
                     DSPVRMYLREMGQIALLNKDEEVEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLI
                     NRERRVKELFKSFDDEEKSDDKLDELDIDEDTDNETELESDEENTKKNNKKEDERTVK
                     VVEKFKALEKAKKDWLKTSKDKESGDELLDKLSIAFKKNILKEKLMDLGPTSKLISEI
                     VKSMETALKSDEEFDKELKRLEYRLPMFSDELKKRHVDILKDITKLSKEEITERALET
                     TMVSTYMEIKKLFQTKEASEKSFDLEKSRLKEILEQIKRGKKISDEAKGRMAKSNLRL
                     VVSIAKRYTNRGLPFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAISRAIA
                     DQARTIRIPIHMIETINQINKIIREHLQKDGKEPDVSVIAKEVSLSIDKVKQVIKITK
                     EPISLEAPIGNEDDGKFGDFVEDRNSLSPMDHILKDDLKEQIDEVLNQLNDREKAVIR
                     MRFGLMDDESDRTLEEIGKELNVTRERVRQIESSAIKKLKHPKVGRKLKNYIEGWK"
     gene            complement(8724..9605)
                     /locus_tag="RTF91_001335"
     CDS             complement(8724..9605)
                     /locus_tag="RTF91_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDZ4944210.1"
                     /translation="MKIKDMEIFLDLLNTQSPTHTANNFSMTQPNISIVIKNLENKFD
                     GILFERLGKKLLPTPKALELGKNWLKIIQAYYQSLEKINNKSMFLGEIKIAYTQSISE
                     HFLAPILFDFRAEFKNIKIRSQTQNSKECLNLLKNGNIEFAIIEAELDPTLIEYENLE
                     INFWQDDELIVATSDKKLNNKEFYIDELLNQKWILREVGSGLRDKFLNEIGASSKKLN
                     IFLELDRMTAIKELVLQRKAISIFSKKAIEKELQNSILYEIKLKNINLKRKFYTLKRK
                     NYNFNRALEKFEKIFKS"
BASE COUNT         3287 a         1140 c         1536 g         3658 t
ORIGIN      
        1 aaaagaaaaa aaagcttttt ttgatttaaa aattcctatt atgaaggtgg gcgaagcttc
       61 ttttgatgag cttaaagaag caattatttt aagtgccgat gagaatgaac ttgaaaataa
      121 tgcaaatgtc attacggatt taagcaaaca gcttgatttt ggagttattt tatattatta
      181 caatccaaat tctcaaaata ccacagatat ggaagagtat tttaggagtt tatctaagct
      241 ttatgataaa aacatacaaa ttattaataa aaatgatgaa aatccacttt taaatctaca
      301 atatcgcgaa gatttgttac aatttgtgag ttttcaaaaa gaattattaa atggagattt
      361 tggcaggaat ttaagtacga atttaaatag gcattattat aaaatgagac aaaattatca
      421 actttttata ccagtagaat aaataattaa ttaaatgtga tagaataaag gcaaaaagag
      481 tgtttgatgc aagtagaagt taaattaaag gaaaatgctt ataaagttta tattgatgag
      541 cttgaagaat tggaatttga taccaaggtt tttatacttt caaatcctaa agtttcagga
      601 cttcatttaa aaacattgct ttttaaaatt aaggcaaaag aaatttttat caccactgta
      661 aaagatggcg aagagtataa aaatttaagc actgtagaag aaattttaaa tcaaatgttt
      721 aattctaagt tggatagaaa aagcgtgctt ataagttttg gtggcggtgt gattagtgat
      781 atgggtggat ttgttgcaag tatttaccaa agaggtattg attttataaa tatccctacc
      841 actcttttag cttgtgttga tgcagcagta ggtggaaaaa caggtgtcaa taatgctttt
      901 ggtaaaaatc tcatcggaac cttttgtcag ccaaaggctg tgtattgtga aagtactttt
      961 ttaaaaactt tgggtcctag ggagcttgct gcaggtatgg ctgaatttat taaaatggca
     1021 gtaatgtttg atgaaagtat acttaatttt atagaaagta ttgatgaaaa aagtttttta
     1081 aatgttactt gtaagaatga aattttcact caaattattg caaaaagcat agagcttaaa
     1141 acaaggatcg ttgagcaaga tgaaaaagaa tcagggctta gaatgctttt aaattatggt
     1201 catacttttg cccatgttat agaaaatttt acagattata agctttattt acatggagaa
     1261 gcagtggcta taggtatgat tatggcaaat caattggctt taaatttgag gattttagat
     1321 caaatgcaaa gtcaaagaat aaaagatatt ttacttaaat ttaatttgcc aatatcgtat
     1381 aaaatcaaca atgtagatga attttatgaa gcttttttta tggataaaaa aagctctaat
     1441 cgaaaaatca attttgttct tcctagtgct ttgggcaaag gcttgataaa agacgatatt
     1501 tccaaaaaag atataattgc aactttaaga gaatttcaat gaaaaaaatt gttattttaa
     1561 ccttttttgt cgtttttgca aattggatta ttattaatat aaatgaaaaa ataaatactt
     1621 caaatactgt aattagcgat agtatttcga atatacgtta tgaaaatttt ataaaatatc
     1681 aagatataaa tgatgaattg attgtattaa attttaattt aaaaaagact tctgatgttc
     1741 atcaacaaga agaacttaaa cgcaaaatag caaatttaga agatcaatta agtttattta
     1801 aagaattgat tgagtttaaa ccaaatgttg aaaatataga agtattaaaa gcttcagaca
     1861 aaaagttaaa agaatttgaa caagctttaa attttgctag tgtttcttat tctgtttatg
     1921 agaaaaaaat tggcgaagag ctttcttggg taagtgctga gattaaagtt caaagcttaa
     1981 gagttgtaaa tacacttgtt attgttatag ctatggcttt tatgttgaaa tttattacta
     2041 aaaaatatat taaagacaat gaaagatatt atattgccac gaagattatt aattttatta
     2101 atatcatttt tcttattttg ctttttgctt atatagaaaa tattgcttac cttataacta
     2161 tacttggttt tacttatgca gccttagtgt taagtatgat tggcaaagag attgtaaaag
     2221 aatttaacaa gtataaagat acaaaaatcg cttatttatc acaaaattta tatttaggaa
     2281 tcttagccca aaattatttt gaacaatatc atgaaaatgc gtatttttat gcaaggaata
     2341 aagattgaaa gaaaaagttt tttttaaaac ctttggatgt cgtacaaata tctatgacac
     2401 agaactttta aaaagttatg taaaagatta tgagattata aataatgaag ataaagcaca
     2461 aattattgtt ataaattctt gcacggttac aaatggggct gatagcggga taaaatctta
     2521 tataaatacc atgcaaaaaa aaggcatcaa ggttatactt acaggttgtg gagctgtgag
     2581 taaaggtaag gaatttttag ataaaaaaca agtttttgga gtgcttggag catcaaataa
     2641 ggataaaatt aatgaatttt taggagcaaa aacaagtttt tatgaacttg ggaatttaaa
     2701 ttttatcgat aaagacatag tttgtgagta tgaaaatcat accaaggctt ttgtgaaaat
     2761 tcaagaaggt tgtgattttg cttgttctta ttgtattatc cctagcgtac ggggtaagtc
     2821 aagaagtgta gatgaaaaaa ctcttttaaa acaggttgaa attttaggag ctaatggcta
     2881 tagtgagatt gttttaacag gaactaatat aggctcatat ggacttaaaa acggtacaac
     2941 tttaggtaaa cttttacaaa aaatgggaca aatttcaggt ataaaacgca taagacttgg
     3001 tagtttagaa cctgcacaaa ttgatgaaag ttttttagaa attttagatg aagcttggct
     3061 tgaaagacat ttgcatatcg ctttacaaca tacaagcgaa aagatgcttc gcataatgag
     3121 aagaaggtca cacacagata atgatttaag gctttttaat attatagcga gcaaaggata
     3181 tgctttaggg acggatttta tagtaggtca tccaggcgag agtgtagaaa tatgggaaga
     3241 agctttaaaa aattttaaag aattttcgct gactcatatc catgctttta tttttagtcc
     3301 tagaaataat acgcattctg ctactatgaa ggatgttata aatggaactt tagctaaaga
     3361 aagattaaat gttttaaaat ccatcgtaga aaaaaataat tataatttta gaaaaaaatt
     3421 tcaagttcca cttgaaattt tagtagaaaa tcaaaaagaa gattattttg aaggttatga
     3481 tcaatttttt aataagatta aaattaagag cgataaagac ataacgaaag aatggattat
     3541 tgtatctcaa tacgaagtac aagaaaagtt taattttgca aatttaaagg ctagataatg
     3601 aaaaataaaa agataatttt agcatctttt atggttttgt gtatactttt tggaatttta
     3661 tattataaaa atgagtctaa atatatagat gaaaatcttt accaaagttt actaagtcaa
     3721 aatttaatcc aaaaagctgt gattgataaa gacgaaattt ggcttaaggc tgaaggtgaa
     3781 aactatgtaa ttataaaaga tggtgtagat ataaaaacac ttttagcaaa agttcctgta
     3841 gaggttagaa aagataatac gttttgggtg ttttttattt tatttgtttt tattattgca
     3901 cttttgataa gttttagtta ttttgctcgt aaaaaagagt tagccaaata tccaatatca
     3961 aataaaaatc aaaatcacac tcaaactcaa aattcgaata taaatttaga aagttctcat
     4021 ataaaacctg tgatttcaaa tattactttt aatgatgtag cgggtgttga tgaagttaaa
     4081 atggagctta gtgagcttgt ggatttttta caaaatccta gaaaatataa ggaatttggt
     4141 ataaaaatgc caaaaggtgt attaatgata ggcccaccag gagtagggaa aaccttgata
     4201 gcaaaagcag ttgcaggaga agctggagtg ccattttttt atcaaagtgg ttcaagtttt
     4261 gttgaaattt atgtaggtat gggtgcaaaa agagttagag agcttttttc aaaagctaaa
     4321 atgatggcac ctagtatagt ttttattgat gaaattgatg ctgtgggtaa ggcaagaggg
     4381 gaaatgtcaa atgttgaaag agatagtact ttaaatcaac ttttaaccca aatggatggt
     4441 tttgaagata ataatggggt tatagttata gctgcgacaa ataaaatcga acttatggat
     4501 cctgctttat tgcgttcagg gcgttttgat agaagaattt ttttatcttt acctgatttt
     4561 aaagataggc ttaaaatttt agaaatttac atgaaagata aaaataataa tgttaattta
     4621 aataaaattg ctaaagcaag tgtgggtttt agcggagcag gtcttgaaac tttggttaat
     4681 gaagcagcaa tcaatgcttt aagaagaaat agtgctttag tagaggaaag tgacttttat
     4741 gcagtgttaa ataaagttct tttgggtaag aaaaagattt taagttttaa cgatgaagag
     4801 aaagaaattc aagccactta ccaagctgca aaggctttga gtgcgtatta ttttgatata
     4861 ggatttgaaa aaataactct tattgaagat cgttttaaag aatatgagca taatataaga
     4921 tcaaaatcag agcttataaa ccgtataaaa gtttatttat cgggttctag ggctatgaaa
     4981 ttaatttaca atgaaagtta tactaattca caagatgatt ttttaaagat taaagaattg
     5041 cttgattata tgttaagttt tgatatgtta gaagaggcaa atttaagtga gcaaaaaaaa
     5101 gaaatggatg aatttttaag ctctatgaag gataagattt taaaattatc agaattttta
     5161 cttgaaaaag aaaaaataga acatgatgat gttaaaaata taatgcaagt ttgatgatac
     5221 ttttaatcat caatttcttt atataaaata gttccattta aatctataag aatttttaca
     5281 tcattatcaa gtttaatctt aaaatagttg atttttcttt caatttctct agctttgaca
     5341 tttggaaatt catttttaat aatattgact aaattttgag gtagaaaatc tagattgaaa
     5401 ggaaaggttt tattttcaat ttctttccaa gttccatcta tatcaaattc aacctctgtt
     5461 ccatcactaa gatagacttc gtaagaattt ttatcttttt gtacgattcc tatgggtgct
     5521 ttaaagttat gctgtaaaaa ttctttggaa atatttggca aattgtcagc agaaattatt
     5581 atatcagcat ttaaaaatat acttaaaata gcagtaatgc ttaaaaattt aattttcaat
     5641 attctttcct aaattatttt tcacaaaatt ataaagaatt tatgtgaatt ttatgtgaat
     5701 tttaagacaa tattataaaa ataaaggttt tatacttgct tacaattttt ttaatttttt
     5761 taaatatttt atgctatttt ttgatttctt atgattatta caatattttt ggtttgaata
     5821 ttttattttt taatggagct tattggcagc ttttaagttc aatgttttta cacggtaatt
     5881 taactcatct tgtattaaat atgatagttt tatttcaatt tgggcgtata ttagaaagtt
     5941 atttgggttc tttgtacttt atttttcttt atcttgtggg tgggttatta tgttcgcttt
     6001 taagcgcttt ttatgtgtat tttgatttta agtattttgg aggaaatgca aatcttatag
     6061 gtgctagtgg tgcaatttgt gttttaatgg gtttttatgc tgttcttgat aaaaatagca
     6121 caaaaggact tatagtagca attttactca tgagctttgc accgttactt atgggggtaa
     6181 atgttgcttg gtatggtcat atttttgggt ttatatgcgg ttatattttg gctaaaataa
     6241 agaggtaaaa tgaaaaaaat ttatattata agacatgcaa aagcaagcaa gaatgaagat
     6301 atagatgact ttaaaaaaaa acttactaag agtggcaagc aagatttaaa aaaacttttt
     6361 aaaaatcttg cctcatatga aattcatcct gatttggtgc tatcaagtcc tgctgttata
     6421 actgctaaaa cagcgaaaaa aatagctaaa ttttataatt ttgataaaaa taaaatttgc
     6481 tttgatgaaa gattgtatct ttgtgatgtt gagaatttgc taaaaattct acgagatatc
     6541 aacgatgaat ttaatgaagt gtttttggtg ggccataatc ctgctttaat ggagcttggt
     6601 gagctattga gttcattgtg tttagcttct tttccaactt cttctgtctt atgtttagaa
     6661 tttgatatta aaaaatttaa aaatttaaaa aaacatagcg gaaaattagt tttttttgag
     6721 catgtgcgta agctaaaaga agaaaaagat ttaggttttt agtaagagtt tagctcttac
     6781 ttccaacctt ctatataatt ttttagtttt cttcctactt taggatgttt gagttttttt
     6841 atagcagagc tttctatttg tcttactctt tctcgagtaa cattaagttc ttttccgatt
     6901 tcttctaaag ttctatcact ttcatcatcc attaaaccaa aacgcatacg aattacagct
     6961 ttttctctat cgtttaattg attcaaaact tcatcgattt gctcttttaa atcgtctttt
     7021 aagatgtgat ccattggaga aagtgaattt ctatcttcga caaaatcccc aaatttgcca
     7081 tcatcttcat ttcctattgg tgcttcaaga gaaattggtt cttttgtaat tttaataacc
     7141 tgtttaactt tatctatact taaacttact tctttggcta taacgctaac atcgggttct
     7201 tttccatcct tttgtagatg ttctctgata attttgttga tttgattgat agtttctatc
     7261 atatggattg gaatccttat ggttcttgct tgatcggcta tagcccttga aatggcttgt
     7321 ctgatccacc aagttgcata agtagaaaat ttatagcccc ttttgtattc aaatttatcc
     7381 acagctttca tcaatcctat atttccttct tgaatgagat ctaagaaagg taaaccacga
     7441 tttgtatagc gtttggctat gcttacaaca agacgcaagt tcgattttgc cattcttcct
     7501 tttgcttcat cagaaatttt tttaccgcgt ttgatttgct ctaaaatttc ctttaagcgt
     7561 gatttttcaa gatcaaagct tttttcacta gcctctttgg tttgaaacaa ttttttaatt
     7621 tccatataag tgcttaccat ggttgtttct aaggctcgtt ccgtgatttc ttccttgctt
     7681 aattttgtga tatcttttaa aatatctaca tggcgttttt taagttcatc ggaaaacata
     7741 ggtaagcggt attctaaacg cttaagctct ttgtcaaatt cttcatcact ttttagtgca
     7801 gtttccattg attttacaat ttcgctgata agttttgaag taggacctag atccattaat
     7861 ttttctttta aaatattttt tttgaatgca atacttaatt tatctaaaag ttcatctcca
     7921 ctttctttgt ctttagatgt ttttagccaa tcttttttag ctttttccaa ggctttgaat
     7981 ttttcgacga cttttacagt tctttcatct tcttttttat tattcttttt agtattttct
     8041 tcatctgatt ctaattctgt ttcattgtct gtatcttcat ctatatcaag ctcatcaagt
     8101 ttatcatcac ttttttcttc atcatcaaag cttttaaata actcttttac tcttctttct
     8161 cggtttatta aaggttcttt ataatctaag ataaaatcta tcaaataagg cacagagcaa
     8221 aaagcatcga tgatgatatc ttcaccgagt tctatttttt tagaaatttc aacttcttca
     8281 tctttattta ataaagcaat ttgtcccatt tctcttaaat acatacgaac aggagagtct
     8341 gatctgctcc attctaataa atcattttca ttggctaaat caaattcgtt ttcaaggctt
     8401 gtatcttgga gtttttgttt ttcttcttga agtctttttg catcttctat atttttcatt
     8461 tgtgcgattt cggctgctga aaaaagttgc actttgtgtt ttttcattaa tgcttgcact
     8521 tttttagctg ttgatgcact tggttgtttt gtaagatatt ttactaattt ttcatatgtg
     8581 atataatctt ttgcattttc ttgaaacaat tcttctaatt cagtttcttg agttttggcg
     8641 ttcattgatt atccttgaaa tttatataac ctttggattt tatctaaaaa ttgcttaact
     8701 tctatataaa tcggttttta tgtttatgat ttgaatattt tttcaaattt ttccaaagct
     8761 ctattaaaat tgtagttttt tctttttagg gtataaaatt tgcgttttag gttgatattt
     8821 ttcaacttga tttcataaag tattgaattt tgtaactctt tttctatggc ttttttagaa
     8881 aatatggaaa ttgcttttct ttgtagaaca agttctttaa tagcagtcat tctatcgagt
     8941 tcaagaaaaa tattgagttt ttttgaactt gcaccaattt catttaaaaa tttatccctt
     9001 aagcctgaac ccacttccct taaaatccat ttttgattca aaagctcatc aatataaaat
     9061 tctttattat tgagcttttt atcacttgtt gctactataa gttcatcatc ttgccaaaaa
     9121 tttatctcta aattttcata ttctatcaaa gttggatcaa gttctgcctc aatgattgca
     9181 aattctatat ttccattttt taataaattt aagcattctt ttgaattttg agtttgagag
     9241 cgaattttta tatttttaaa ttctgcccta aaatcaaata aaataggagc taaaaaatgt
     9301 tcagagatac tttgagtgta agctattttt atttccccta agaacatgct tttattattt
     9361 attttttcca agctttgata atatgcttgt ataattttta gccaattttt ccctagttct
     9421 aaagcttttg gtgtgggtag aagttttttt ccaagtcttt caaataagat gccatcaaat
     9481 ttattttcta aatttttgat tactattgaa atattaggtt gggtcataga aaaattgttg
     9541 gctgtgtgag ttggactttg agtatttaaa agatctaaaa agatttccat atctttgatt
     9601 ttcatgagtg attccttaat t
//
LOCUS       DAPWAA010000054         9576 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.054, whole genome shotgun sequence.
ACCESSION   DAPWAA010000054 DAPWAA010000000
VERSION     DAPWAA010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9576
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.054"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            9..194
                     /locus_tag="RTF91_001336"
     CDS             9..194
                     /locus_tag="RTF91_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein"
                     /protein_id="HDZ4944211.1"
                     /translation="MFFKKKILQKQKEKPKISTNDAILDDRLYEFKNKVQKISKDEVS
                     VSLLARQLSRLIKANKF"
     gene            complement(191..733)
                     /gene="mog"
                     /locus_tag="RTF91_001337"
     CDS             complement(191..733)
                     /gene="mog"
                     /locus_tag="RTF91_001337"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HDZ4944212.1"
                     /translation="MDTIKIGILTLSDRASSGIYEDKATAEIEKILNLYIKNEIIYHK
                     ELIPDDYDLIIKKLLYLADEKKCDLIVTSGGTGPALRDVTPEATEAVCDKIMPGFGEL
                     MRLESLKYVPTAILSRQSAGIRNKSFIINLPGNPKAIKECLEPVFPAIPYCIDLIKGA
                     YIEANDEVIKVFRPKKKCQN"
     gene            complement(753..1736)
                     /gene="corA"
                     /locus_tag="RTF91_001338"
     CDS             complement(753..1736)
                     /gene="corA"
                     /locus_tag="RTF91_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDZ4944213.1"
                     /translation="MLYIYIKTQNALVQRINFNLDSQELPQNILWIDLLHPSAEEIAF
                     ISSEFNLEFPTKEEREEIELSAKYWEDNTTITINAHFLVRELKSDEEDKNFIKLRTEI
                     VTFATAKNILFTIRYNEFSTFEEIQARILASPKNFEDGFDIINKMFEVRVEKDADLLE
                     WIDKEARHLRASVLEKKDEYSYDKMLKDISSLQELNMRIRDSLFDKRRAMTSLLKSDK
                     IDKDIKQNLTIVLKDLNSLVEFSVSQLNILDNIQTILASQINIEQNKIIKIFTVATVA
                     MMPPTLIGTIYGMNFNFMPELKLHYAYPIVLCVMVVSIILPLVVFKKKGWL"
     gene            1855..2901
                     /locus_tag="RTF91_001339"
     CDS             1855..2901
                     /locus_tag="RTF91_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDZ4944214.1"
                     /translation="MSKKFFLSLSLVILLFSNLQAIDENLIKAAQAEGRVNSLGMPDT
                     WANWKDTWADLKNLYGIEHSDTDMSSAQEIAKFKAEKKNASGDIGDVGASFGDIAVKQ
                     GVAQPFKTSYWDQIPTWAKDKDGNWLLAYTGTIAFIVNKAVVKDVPKTWQDLLKGNYK
                     VTVGDTSVAAQAVSAVLAANYALGGDEKDLSPALAFFNTLAKQGRLVNNDVSIANLEK
                     GEVEVGLVWDFNGLGYKDKVGKDRYEVLIPADGSVISGYATIINKYAKHPNSAKLARE
                     FILSDKGQINLAKGYARPIRIDYIILPDDIKAKLLPSEQYKNARVIKDQKAWEKSAKK
                     LPQLWQEKVIVDMK"
     gene            2912..4239
                     /locus_tag="RTF91_001340"
                     /pseudo
     CDS             2912..4239
                     /locus_tag="RTF91_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344146.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
     gene            4236..5045
                     /locus_tag="RTF91_001341"
     CDS             4236..5045
                     /locus_tag="RTF91_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HDZ4944215.1"
                     /translation="MMSKVILIVLDGLNFKTASINMGYLNALCKENLGKFYSLECELP
                     SMSRPLYECLLTGVKPVLSGIINNKLSFSKQISIFQLCKEQGLKAGSASYHWVFELYN
                     KKEFIPSLHRHIEDESLTLPYGHFYYEDDYLDSHLFADGEHLRRKYDLDFTLIHSMNI
                     DDTGHKFGSHSNEYANKTKKVDVLISEYLPIWLEQGINVIITSDHGMTEGKNHGGLSE
                     DEVLVPFFTFGCAFSYEDAKIKQVEICGSICEILGLKHDKAYNDKILKAKK"
     gene            5042..5881
                     /locus_tag="RTF91_001342"
     CDS             5042..5881
                     /locus_tag="RTF91_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDZ4944216.1"
                     /translation="MKERILAFLSILPFFIVFTFFMIAPLVWIVFNAFYVEEDEVYSL
                     ANFIHIFQSKFYLQSIINSLQISFISSIFGLLIGLLASYSLFVLAPSKICKFLFSLST
                     MISNFSGVPLAFAFIIVLGSSGVVNVLLKNLGIEPFISIYANFGVNIVYVYFQIPLAI
                     LLLLPAFKSLENSHLNACKILGGGNFLYWLKIAFPLLAPALFGVFVILFANAFGAYAT
                     IYALSSGNFNVAPVRIAALIAGDINLDPYMASALSIVITIIMLVITFIANFLSKKYNF
                     KVL"
     gene            5882..6661
                     /locus_tag="RTF91_001343"
     CDS             5882..6661
                     /locus_tag="RTF91_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ4944217.1"
                     /translation="MSENLSLKVRIYHYMILFLVFLFLTLPLMATFLYSISTSWGASV
                     LPDGLTLKWYQEFFHDERFLLALWHSLLVCVGSIILSVVLVFPLVFVVNYYFLKLKAF
                     INILIIMPFAIPPIVTCVGLLQLYADSIGGTAWILIFTYFTIALPFIYRALDNAISNV
                     NLNELIASNAMLGGSLMGAIFKLVLPNLRNGILVAVFLSFSFLIGEFLYANILVGSAY
                     ETLQVYLYNIKNQSGHYSSALVIIYFALIFIATFIASLIKE"
     gene            6665..7654
                     /locus_tag="RTF91_001344"
     CDS             6665..7654
                     /locus_tag="RTF91_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4944218.1"
                     /translation="MAYLKIKNFKKAYKDKIVFEDINFNAKKGEFITLLGPSGCGKST
                     LLRCIAGLSQINGGKISLNDKDITKLSPQKRNIGMVFQNYALFPNLNVFENVAFGLKI
                     KKMDKKDIEKRVKKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVTKPDLLLLDEP
                     LSALDTKIRKHLRVQIKEIQKELDLTTIFVTHDQEEALELSDRIILMNKGKIIQNSNA
                     NNLYLLPESHFVASFIGNYNILSPKDLDSLGLEHDFKRDIALRPETIEISNEGLEAKI
                     KEKSLLGNIIRYKVKVQEIELKVDTLNFSTHSAYEVGDKIALRFNLSLAKELK"
     gene            7651..8289
                     /locus_tag="RTF91_001345"
     CDS             7651..8289
                     /locus_tag="RTF91_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDZ4944219.1"
                     /translation="MKLVLFDLDDTLIQGDSAKLWLEFCIQKGFLPKEYLEKIIFYQK
                     QYHEKKLDMDEFMTFFLQSVKDKNENEISFLIDEFIKIYIKPYKKAKELIAKYQDQRC
                     IIISATAEFLVKKIASFLGVKESIAIKCECVDGKFSGKAYGIYSFKEGKVLRLKEYLG
                     KDYEKWMKDSYFFSDSINDLPLLESVSKAFVCNGDEKILKIAKERKYEILNF"
     gene            complement(8313..9068)
                     /locus_tag="RTF91_001346"
     CDS             complement(8313..9068)
                     /locus_tag="RTF91_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDZ4944220.1"
                     /translation="MKKISSIVLAALVGLFLGACNDSKNKESNASVELKVGTAPNYKP
                     FNYKENSKLTGFDTDLVEEIAKKNGIKIVWVETNFDGLISALKAGKIGMIASAMSATD
                     ERRQNVDFTKPYYISKNLYLKLKNNDSLQTKSDLEGKKIGVQLGTLQENTAKAIKNAQ
                     VQSNKDLNIAVLALKNNKIDAIITDQDTAKGFLTENPELVSFYQETDGGEGLSFAFDK
                     NKQKEIIEIFNKGVDEAKTNGFYDTLIKKYKLE"
     gene            9189..9506
                     /locus_tag="RTF91_001347"
                     /pseudo
     CDS             9189..9506
                     /locus_tag="RTF91_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344153.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         3220 a         1308 c         1565 g         3483 t
ORIGIN      
        1 attaaaaaat gttttttaaa aaaaagattt tgcaaaaaca aaaagaaaag cctaaaattt
       61 caaccaatga tgcgatttta gatgataggc tttatgagtt taaaaataaa gtacaaaaaa
      121 taagcaagga tgaagtttca gtaagtctac ttgctagaca actaagcaga cttattaagg
      181 ctaataaatt ttaattttga cattttttct tagggcgaaa aactttaata acttcatcat
      241 tcgcttctat ataagcacct tttattaaat caatgcaata aggtatggcc ggaaatactg
      301 gctctagaca ttcttttata gctttaggat tacctggtaa attaatgatg aaagatttat
      361 tgcgaattcc tgcactttgt cttgaaagta tggctgttgg gacatatttt aagctttcta
      421 aacgcatgag ttctccaaaa cctggcatta ttttatcaca cactgcttct gtagcttctg
      481 gggttacatc acgaagtgct ggacctgtgc ccccacttgt aacaatcaaa tcgcattttt
      541 tttcatctgc tagataaagt aattttttaa tgattaaatc ataatcatca gggattaatt
      601 ctttatgata aatgatttca ttttttatat ataagtttag tattttttca atttcagcag
      661 tagccttatc ttcatatata ccactacttg ctctatcgct tagggttaaa attcctattt
      721 tgattgtatc cattatttct ccttaaatat tattatagcc aacctttttt cttaaaaaca
      781 actaaaggta aaatgataga aactaccatc acgcaaagta ctataggata agcataatga
      841 agtttaagct cgggcataaa attaaaattc ataccataaa ttgttcctat tagagtaggt
      901 ggcatcatgg caacggttgc aacggtaaaa attttgataa ttttattttg ctctatatta
      961 atttgactgg ctaaaatggt ttggatatta tctaagatgt taagttgtga aacgctaaat
     1021 tcaactaaag aatttaggtc ttttaaaact atagttaagt tttgttttat atctttatcg
     1081 attttatcgc tttttagtaa agaagtcata gcgcgacgct tatcaaataa agaatccctt
     1141 attcgcatat taagttcttg taaacttgaa atatctttta gcattttatc atagctgtat
     1201 tcatcttttt tttctaaaac acttgctctt aaatgtcttg cttctttatc tatccattca
     1261 agtaaatccg catctttttc aacacgcact tcaaacattt tattaataat atcaaaacca
     1321 tcttcaaaat tctttggact agctagaatt cttgcttgga tttcttcaaa agtactaaat
     1381 tcattgtatc ttatggtaaa taagatattt ttagctgtag caaaagtaac aatttccgtg
     1441 cgaagtttaa tgaaattttt atcctcttca tcacttttaa gctctcttac taaaaagtga
     1501 gcattgatgg ttattgttgt attatcttcc caatattttg cactcagttc tatttcttct
     1561 ctttcttctt ttgtcggaaa ctcgagatta aattcgcttg atataaaagc aatttcttcc
     1621 gcacttggat gaagtaaatc aatccataaa atattttgtg gtagttcttg gctatcgaga
     1681 ttaaaattga ttctttgtac taaagcattt tgagttttga tgtaaatata aagcatgatt
     1741 actccttgtt tctgacttta aaattataac cttgtttgct taaaaattaa cttgtttcta
     1801 aaatgtttcc aaaacttatt aaatttccaa aaatattttt taataaggaa aaaaatgagt
     1861 aaaaaatttt tcttaagttt aagtcttgtt attttattgt tttcaaattt acaagctatt
     1921 gatgagaatt tgatcaaagc tgcacaagca gaaggtaggg taaattcttt gggtatgcct
     1981 gatacttggg caaactggaa agatacttgg gcagatctta aaaatcttta cggtatagaa
     2041 catagtgata cagacatgag ttcagctcaa gaaattgcta agtttaaagc cgaaaagaaa
     2101 aacgcaagtg gcgacatagg tgatgtagga gcttcttttg gggatatagc agttaaacaa
     2161 ggagtagctc aaccttttaa aacaagctat tgggatcaaa ttccaacttg ggctaaagat
     2221 aaagatggaa attggctttt agcttataca ggaactatag cttttatagt caataaagct
     2281 gtggtaaaag atgtacccaa aacttggcag gatttactta agggaaatta taaggttacc
     2341 gtgggtgata caagtgtggc agctcaagct gtgagtgcgg ttttggcagc taattatgct
     2401 ttaggcggag atgaaaaaga tctaagtcct gctttagctt tttttaatac tttagccaag
     2461 caaggaaggc ttgtaaataa tgatgtaagc atagccaatc ttgaaaaagg tgaagttgaa
     2521 gtaggcttgg tttgggattt taatggttta ggttataaag ataaagtagg aaaagatcgt
     2581 tatgaagttt taatccctgc cgatggtagt gttatttcag gttatgcgac tattatcaat
     2641 aaatacgcaa aacatccaaa tagtgctaaa ttagctcgtg aatttatact ttctgataaa
     2701 ggacaaatca atctagctaa aggttatgca agaccaataa gaattgatta tatcatcttg
     2761 ccagatgata taaaagctaa gcttttacca agtgagcaat acaaaaatgc aagagtaatt
     2821 aaagatcaaa aagcttggga aaaaagcgct aaaaaattac cacaactttg gcaagaaaaa
     2881 gttatagtag atatgaaata aaggattgtg aatgaaaaaa gttattttaa taagtactat
     2941 gctttgtaat gttttatttg gagttcaaga atatcaagca aatttagcac agggcatatt
     3001 atcatagatt caaaaagtat agtgatgccc cctaaggatg ctcctgattt tttcaaaact
     3061 tatgggaaat ttgcaaattt gactagagaa gaaaaaatcg ctgcttttaa atctaaaggc
     3121 aatagagaaa cagattttta tttgcctttt aaaaatcaac ctatacaagg acatagcggg
     3181 ataaaatata ttccaaaaaa agatgttttt tgggtgattg cagataatgg tttaggcaaa
     3241 aagcataact cttatgatgc catgctttat gcccatgagt ttcaatttga ttttaaaaac
     3301 tcaaaatatc aacttttaaa aacggtcttt tttaaagata gtgataaaaa atatccttat
     3361 cctataacca ctgaaacaac caaagaaagg tatttaagcg gggctgattt tgatactgag
     3421 agcatacaaa ttatcaatga tgaaatttac ataggcgatg aatttggtcc ttatttactt
     3481 cactttgata aaaatgggaa tctaaaagaa gtttttgatg tgtatatgga aggtaaaaaa
     3541 ctcatttccc ctgataatct aagcctaaaa cttgacaata agccagatgg aaaaaatcca
     3601 gaatttaacg tcaaacgctc taaaggtttt gaagctatgg caagctctaa agatggctct
     3661 aaactttatc tgcttttaga ggcaagcatt tatgataaca acacttatga aaaccaaaaa
     3721 ggcaaagaat actcaagaat catagaattt gatgtaaaaa ataaaaaatt caccggcaaa
     3781 acttataaat atttcttaga agataaaaac cattctgtag gcgattttaa tatgatagat
     3841 gataaatacg gaatcatcat agaaagagat caaaaagaag gcaccaaaga taaagcctgt
     3901 aaagaaaatg aagatactaa gcattgcttt aacaacatcg ctgaatttaa aagaatctat
     3961 aaggttaaac tagatgatga gacttatgaa gctcaaaaaa tttcctatat agatctttta
     4021 aatatcaaag ataaaaataa aatttccaaa aagcctttgg ttaatgataa atttgttttt
     4081 ccttttgaaa ctatagaggg tgtggatata gtagatgatt ctcatataat aatagaaaat
     4141 gataataact tcccctattc ttcaagtaga gatcctaata aaaccgatga taatgaattt
     4201 attttacttg aagtaaaaga ttttttaagg agtaaatgat gtcaaaagtg attttgattg
     4261 tacttgatgg tttaaatttt aaaaccgcta gtataaatat gggatattta aacgcgctct
     4321 gtaaagaaaa tttaggtaaa ttttattctt tagaatgtga gcttcctagc atgtcgcgtc
     4381 ctttatatga gtgcttatta acaggtgtaa agcctgtctt aagcgggata attaacaaca
     4441 agcttagctt ttcaaagcaa atcagtattt ttcagctctg caaagaacaa ggcttaaagg
     4501 ctggaagtgc gtcttatcat tgggtttttg agctttataa caaaaaagaa ttcattcctt
     4561 ctttgcatcg ccatatagaa gatgaaagct taactttgcc ttatgggcat ttttattatg
     4621 aagatgatta tttagattct catttatttg ccgatgggga gcatttaaga agaaaatatg
     4681 atttagattt tactcttata cattctatga atatagatga tacaggacat aaatttggct
     4741 cacactctaa tgagtatgct aataaaacca aaaaagttga tgttttgatc tctgagtatt
     4801 tacctatttg gctagaacaa ggcataaatg taatcatcac gagtgatcat ggcatgacgg
     4861 agggtaaaaa tcatggaggc ttaagcgaag atgaagtttt ggtgcctttt tttacctttg
     4921 gttgtgcttt ttcctatgag gatgccaaga taaaacaagt tgaaatttgt gggagcattt
     4981 gtgaaatttt agggcttaaa cacgataaag catataatga caaaatttta aaggctaaaa
     5041 aatgaaagaa aggattttag cctttttaag cattttacct tttttcatag tttttacttt
     5101 ttttatgata gcgcctttgg tttggatcgt ttttaatgct ttttatgtag aagaggatga
     5161 agtttattct ttagcgaatt ttatacatat ttttcagtct aaattctatc tacaaagcat
     5221 tataaattct ttgcaaatca gttttatttc tagtattttt gggcttttaa taggtctttt
     5281 ggcgagttat tctttatttg tcttagctcc atctaaaata tgtaaatttc ttttttcttt
     5341 aagtactatg ataagtaatt tttcaggagt tcctttagct tttgctttta tcatagttct
     5401 tgggagtagt ggtgtagtta atgtgctttt gaaaaattta ggtatagagc cttttattag
     5461 tatttatgct aattttggtg taaatattgt ttatgtgtat tttcaaattc ctttggcgat
     5521 cttactttta cttcctgcct ttaaaagtct tgaaaactcg catttaaatg cttgtaaaat
     5581 attaggtggg ggtaattttt tatattggct aaagatagcc tttcctttgc ttgctcctgc
     5641 tttatttgga gtttttgtga tcttatttgc taatgctttt ggggcttatg cgactattta
     5701 tgctttaagt tcggggaatt ttaatgttgc tcctgtaaga attgctgctt taatcgcagg
     5761 tgatatcaat cttgaccctt atatggctag tgctttaagt attgttataa ctattattat
     5821 gcttgttatt acctttatag ctaattttct ttctaaaaaa tataatttta aggtgcttta
     5881 aatgagtgaa aatttgagtt taaaagttag aatttatcat tatatgattt tgtttttagt
     5941 gtttttattt ttgactttgc ctttgatggc tactttttta tattctattt ctacttcttg
     6001 gggtgcgagt gttttacctg atggtcttac gcttaaatgg tatcaagaat tttttcatga
     6061 tgaaagattt ttgcttgctc tttggcattc tttgcttgtt tgtgtaggta gcatcatact
     6121 ttctgtagtt cttgtttttc ctttagtttt tgtggtgaat tattattttt taaaattaaa
     6181 agccttcata aatatactta tcatcatgcc ttttgccata cctcctatag ttacttgtgt
     6241 agggctttta caactttatg ctgatagtat aggtggcaca gcttggatac ttatttttac
     6301 ttattttact atagccttac cttttattta tagagctttg gataatgcta tatctaatgt
     6361 aaatttaaat gagctcatcg catcgaatgc tatgcttgga ggttctttga tgggagcaat
     6421 ttttaaactt gtcttgccca atctaagaaa tgggatctta gtagcagttt ttttaagttt
     6481 ttctttttta ataggcgaat ttttatacgc aaatattctt gtaggaagtg cttatgagac
     6541 cttgcaagtt tatctttata atattaaaaa tcaaagcggg cattattcta gcgctttggt
     6601 aataatttat tttgcattaa tttttatagc aacttttata gccagtttga ttaaggagta
     6661 aaaaatggct tatttaaaga ttaaaaattt taaaaaagct tataaagata aaattgtttt
     6721 tgaagatatt aattttaatg ccaaaaaggg tgagtttata acccttttag gtccaagtgg
     6781 ctgtggcaaa tccactcttt taaggtgtat agcaggactt agccaaatta atggaggcaa
     6841 aatttctcta aatgataagg atattactaa actaagccct caaaaaagaa atatagggat
     6901 ggtttttcaa aactatgctc tttttccaaa tcttaatgtc tttgaaaatg tagcctttgg
     6961 tttaaaaata aaaaaaatgg ataaaaaaga catagaaaaa agagtgaaaa aaatgttaaa
     7021 gctcgttgag ctggaagaat atgccaaaac ttatccgcat aagctctcag gcggacaaat
     7081 gcaaagagta gctttggcaa gatctttggt tactaaaccg gatttgcttt tgcttgatga
     7141 acctttatcg gcacttgata ctaaaatccg caagcattta agagtacaaa ttaaagagat
     7201 tcaaaaagaa cttgatttga ctactatttt tgtaacacat gatcaagaag aagctttgga
     7261 gctatccgat aggattattt taatgaacaa aggtaaaatt atccaaaatt ccaatgcgaa
     7321 caatctttat ctcttgccag aatctcattt tgtagctagc tttataggaa attacaatat
     7381 tttaagccct aaagaccttg atagtttggg cttagagcat gattttaaaa gagatattgc
     7441 tttgcgtcct gaaactatag aaatttccaa tgaaggttta gaggctaaga tcaaagaaaa
     7501 atcattgctg ggcaatatca tacgctataa ggtcaaagta caagaaattg agcttaaggt
     7561 agatacttta aattttagca cccatagcgc ttatgaagtg ggcgataaaa tcgctttaag
     7621 attcaatctt tctttagcaa aagaattaaa atgaaacttg ttttatttga tttagacgat
     7681 accttaatac aaggcgatag cgctaaactt tggcttgaat tttgtatcca aaaaggtttt
     7741 ttgcctaaag aatatttaga aaaaatcatt ttttatcaaa aacaatatca cgaaaaaaaa
     7801 ctcgacatgg atgaatttat gacttttttt cttcaaagcg ttaaggataa aaatgaaaat
     7861 gaaatttctt ttttaatcga tgaatttatc aaaatttata taaaacccta taaaaaggct
     7921 aaagagctta tagctaaata tcaagatcaa agatgtatta tcatttcagc cacagccgaa
     7981 tttttagtta aaaagatcgc ttcttttttg ggcgtcaaag aaagtatagc cataaaatgc
     8041 gagtgtgtgg atggaaaatt cagcggaaaa gcttatggaa tttatagctt taaggagggc
     8101 aaagttttaa gacttaaaga gtatttgggt aaagattatg aaaaatggat gaaagattct
     8161 tattttttta gtgattctat taatgattta cctttgttag aatctgttag taaagctttt
     8221 gtatgcaatg gcgatgaaaa aattttaaaa atcgcaaaag agagaaaata tgagattttg
     8281 aatttttaag ctataagcgt gaattttcac gcttattcta gtttatattt tttgattaaa
     8341 gtatcataaa atccattggt ttttgcttcg tctacgcctt tgttaaatat ttctataatt
     8401 tctttttgtt tatttttatc aaaagcaaaa ctcaagcctt ctccaccatc tgtttcttgg
     8461 taaaaactta ctaactctgg attttcagtt aaaaaacctt tggcggtatc ttgatcagtg
     8521 atgatagcat cgattttgtt attttttagc gctaaaacag ctatatttaa atctttattg
     8581 ctttgcactt gtgcattttt gatagctttt gcagtgtttt cttgtaaagt tcctagctga
     8641 actcctatct ttttaccttc taaatcactt tttgtttgaa gtgaatcatt attttttagt
     8701 ttaagataaa gatttttact tatataataa ggttttgtaa aatcaacatt ttgtcttctt
     8761 tcatcagttg cgctcatagc tgaggcaatc ataccaattt taccagcttt taaagcagaa
     8821 attaatccat caaaattggt ttcaacccaa acaattttaa tgccattttt tttagcaatt
     8881 tcttcaacca aatctgtatc aaaacctgtg agttttgagt tttctttata gttaaagggc
     8941 ttataatttg gagcagttcc aacctttaat tctacgcttg catttgattc tttattttta
     9001 gaatcattgc aagcacctaa aaataagcca actaaagcag ctaaaacaat gcttgatatt
     9061 tttttcattt ctttcctttg atataaaatg ttttaaaatt atacttaatt ttaaatttat
     9121 atttagttaa gtctagctca attttttata aaagctgtat taatgttatg cttttggata
     9181 atatttaaat aaaacaaaat acgaaattta gattaggtgt ttgcaatgta gttttatttt
     9241 cttcagtttg ttttgcagca gtttaagcta caaaaatttt atatttttga acattctttt
     9301 agggatatca agtttacgat cctcaattag aaatttttta aaaaaataat gaaaattttt
     9361 atacctctaa gtcaaaatat cctgtatcaa atttaactat gacttacaat aatcctaaaa
     9421 atttatccaa acttgaaatt ttaacctcaa ggtactttta caaagaagag attatgacag
     9481 cttttggtac tttaggagct gtatcttgag atacttaggc tgtttatact gtttatcgta
     9541 acagtttacg ctcaaaatgc aaaatgataa actcat
//
LOCUS       DAPWAA010000055         9574 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.055, whole genome shotgun sequence.
ACCESSION   DAPWAA010000055 DAPWAA010000000
VERSION     DAPWAA010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9574
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.055"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            50..745
                     /locus_tag="RTF91_001348"
     CDS             50..745
                     /locus_tag="RTF91_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDZ4944221.1"
                     /translation="MTQEELDALMNGDVDLDLEAEAEVKSEESHTEEDALTLEDVKIA
                     DHKPNPSVVWPPPPPNQEHKVVHQLDDVTKDSELKATEIMDKLESINNFFADSESLLK
                     EINKAIEKNIDIFSKLNEKFPNVESFSEALELNNKAKKSSKEIVENLQSGQDEVMMAM
                     DAMQYQDIHRQKIERVINVMRALNHYMSSLFESKIDDKKRVSSAVHIEGDSTNDVVSN
                     EDIEALIANLGQK"
     gene            742..1995
                     /locus_tag="RTF91_001349"
     CDS             742..1995
                     /locus_tag="RTF91_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDZ4944222.1"
                     /translation="MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREF
                     NYESFEKAIKYTHERGKKIYVTLNGFHLSSQIEGLKRHILKLREMKPDAFIVASVGAM
                     RLVKELAPEIALHVSTQANILNYLDAQVYKDMSAKRVVIARELGLKDAKALKENCDIE
                     LEAFVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEE
                     DENGTHVFNSKDLNLCSYIEKIIQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDAL
                     EGKFEPSKYEKEIATLKNRGFTDGYLVSRPLEKTDTQNHNTSIEEGSHQVHAISEDGI
                     FFKCKGKIVLNTPYEILTPLNDVIQVCDNELGKIYQKKDKYFVEFKKLIAKNNKEFNE
                     IHSGNEHEIQLPSKISALSFLRKEI"
     gene            1996..2490
                     /gene="purE"
                     /locus_tag="RTF91_001350"
     CDS             1996..2490
                     /gene="purE"
                     /locus_tag="RTF91_001350"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDZ4944223.1"
                     /translation="MNFISILMGSKSDYEVMKEAAKTLESFGVKYELIISSAHRSPKR
                     TKEYIVSAEEKGAKVFIAAAGMAAHLAGVVAAYTTKPVLGVPMSGSNLASMDSLFSTV
                     QMPSGIPVGTLAIGKAGAINAAYLAMQILAIYDTDLAQKLKENRLEKEKKLISDSKEV
                     EVLL"
     gene            2500..3036
                     /locus_tag="RTF91_001351"
     CDS             2500..3036
                     /locus_tag="RTF91_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3972 domain-containing protein"
                     /protein_id="HDZ4944224.1"
                     /translation="MQTYLELEEFCKLVHLNEDVVKSMMANGALNFKEEEGKIYIEAH
                     QGTFSVVPSAAKSQPAMVNSMTLAGESFVEKTIGTILNLHEKVLDAKDETLEALKNEN
                     KFLKDALYSMQELYDADRKTIETLNNELKHAREEIEFLKRKYKLMWSKTAEIFGTKTE
                     PDLEMNKNLEKPAENTEQ"
     gene            3048..3911
                     /gene="glyQ"
                     /locus_tag="RTF91_001352"
     CDS             3048..3911
                     /gene="glyQ"
                     /locus_tag="RTF91_001352"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDZ4944225.1"
                     /translation="MTFSQMILNLQNYWQEQGCVIMQPYDMPAGAGTFHPATFLRSLG
                     KKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFD
                     LKSHDIRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYG
                     LERIAMYLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFE
                     NSYKECKNILEQGLALPAYDYCMLTAHTFNLLDARGAISVAQRQDYMLKIRELSKNCA
                     EIYKKNLNETE"
     gene            3898..4623
                     /locus_tag="RTF91_001353"
     CDS             3898..4623
                     /locus_tag="RTF91_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDZ4944226.1"
                     /translation="MKLSKIYNFLDQLSPFNTQESWDNSGILLGDKDNEISTVYLSLD
                     IDENIIKKASENSLIITHHPLIFKGLKNLYDKAYPRAFIKEMIYKNISLISMHTNYDL
                     SHLNAYFTEEILGFKISSRDEFLIYVENSMSFENLCDWVKKKLNLQNLRISDCGKKDI
                     KRIAICTGSGGDLISKIDADCFLSGDFKYHQALEALSNQMSLIDLGHFESERYFSQCL
                     AKDLKNLPLQVIITVSKNPFQYF"
     gene            4633..5349
                     /locus_tag="RTF91_001354"
     CDS             4633..5349
                     /locus_tag="RTF91_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HDZ4944227.1"
                     /translation="MNKYLEQLVLLSKIDQEIDSYEPKIDSINKTLKDAELKIGKINT
                     DLEKINEEIKDIENQKVQNNAHISEFLAKIKELSKKSGAVKTEKEANALKIEEDIAKE
                     QLDAANDEIIRLDKILDNKKTYKKELEEEKIKQEQNINEIRVSIKSEMEVLKKDRMSV
                     YDKKNKLVGEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGE
                     EIVTCPHCGRILYKEQEEQD"
     gene            5346..6503
                     /gene="waaA"
                     /locus_tag="RTF91_001355"
     CDS             5346..6503
                     /gene="waaA"
                     /locus_tag="RTF91_001355"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HDZ4944228.1"
                     /translation="MIFFYYFLTWMAFLFCAVFILLLSFLKFKYKTSLKSRFFLYKNL
                     HQEKADVHFHACSYGEVRSIKSLVLKFDSRVTTITQTGFECAKEFCKKVNYLVFENFL
                     PFWFKPCKVLVIFEAEYWLMLVFIARIYKAKIILLNARISDKSYHSYQRFSFFYKKIF
                     SYVDEVFAQSDLDKIRLESLGAKNVKIFKNIKANLEIKKSQNYIKPKEKLVIFASTHK
                     DEEELLLDNFTLEENEKLIIAPRHPERFKEVENLLFNKGLKFEKFSSLKGQNKNFSEK
                     ILLLDALGELVNFYAISDVVVLGGSFIEGIGGHNPIEVAHFNNVLISGKFIHNQKVLF
                     EEVENVYFCENLKDLNDKIHRLNLKAKISKKENLDLIVQTIQKGIDARKSL"
     gene            6484..7236
                     /locus_tag="RTF91_001356"
     CDS             6484..7236
                     /locus_tag="RTF91_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDZ4944229.1"
                     /translation="MQEKAYKILALQEKISNREAKDLIDKGCVFSHGKKVVVARALMS
                     DKVKFNVIKTKNPQIIFEDDKIIAINKPYSCVSEDLEKKINAKLLNRLDKETSGVILL
                     CKDEDFRKLCIEEFKKHRVYKSYIAVLDGVLAEEIEVNEPIFTIKAKGGALSKVSKDG
                     LNASSIITPIMMQSKKTLAKIVIQTGRTHQIRVHTKFIKHGVVGDEKYAKISSDRMYL
                     HSYEIKIFDYHFKANLDSSFEKFGFEIKSLDF"
     gene            7305..8642
                     /gene="ffh"
                     /locus_tag="RTF91_001357"
     CDS             7305..8642
                     /gene="ffh"
                     /locus_tag="RTF91_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDZ4944230.1"
                     /translation="MFELISESFKSAINKLRFVDDEKALKNALETLKKTLLKADVHHK
                     VTKELLTLIEEDVKQNGIGQQQFLNAIKVNLENILSINGKNQGFVFASKPPTVVLMAG
                     LQGGGKTTSTIKLANYLKLRNKKVLVAACDLQRLAAVEQLRQLCQANGIELFFIENEK
                     DPIRVAKEALEKAKSSMVDVLLVDTAGRLAIDDTLMNELKAVKDVLNPDEIFYVADAM
                     SGQDGVKTAANFNEALGISGIILSKFDADTKGGVALGIAKQIGIPLRFIGVGEKVADL
                     EVFIPDRIVSRIMGEGDLATLAEKTAAVIDEKEAKKLNQKIKKGEFNFNDFINQMESI
                     KKLGSMKSLIGMIPGLGGMANAVKDIDLDNSKEIVHIKAMISSMTPKERENPDLLNNA
                     RKRRIAEGAGLSQMEVNRFLKQFSNAAKLAKRFSGKKGMESLTQMMTQARRQF"
     gene            8707..8934
                     /gene="rpsP"
                     /locus_tag="RTF91_001358"
     CDS             8707..8934
                     /gene="rpsP"
                     /locus_tag="RTF91_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDZ4944231.1"
                     /translation="MTVVRLTRMGRTKRPFYRIVVTDSRKRRDGGWIESIGYYNPMVE
                     PEVVKVDTERLAYWKSVGAKLSDKVASITSK"
     gene            8937..9179
                     /locus_tag="RTF91_001359"
     CDS             8937..9179
                     /locus_tag="RTF91_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HDZ4944232.1"
                     /translation="MVENFLREYAKLIADYPEQIDTQKIELGENFFEIILFAHKVDTG
                     KLIGKNGKMINAIKTVISAYKSKDASSYRVTVKALE"
     gene            9172..>9574
                     /gene="rimM"
                     /locus_tag="RTF91_001360"
     CDS             9172..>9574
                     /gene="rimM"
                     /locus_tag="RTF91_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA processing protein RimM"
                     /protein_id="HDZ4944233.1"
                     /translation="MSEKDFVQVAKLGKTVGLKGYVKLHNLSDFSSQFKKDATFFIKN
                     TREILKIKHYNISSSTVLFENYEDVEKAKELTNLILFQSIEKSRQTCKLKKDEFFYFD
                     ILECEVFEEDKRLGKVIDILETGSSYLFEIQS"
BASE COUNT         3615 a         1046 c         1799 g         3114 t
ORIGIN      
        1 tataatttca agtaattttg aaaatctaga tttaaaataa ggaaaaaaaa tgactcaaga
       61 agagcttgat gctttgatga atggtgatgt tgatcttgat ttagaggcag aagcagaggt
      121 aaaaagcgag gaatcgcata ctgaagaaga tgctttgacg ttagaggatg ttaaaatagc
      181 tgatcataaa cctaatccta gtgtagtatg gccaccacca ccaccaaatc aggaacataa
      241 agttgtgcat cagctagatg atgttacaaa agatagtgag cttaaagcaa cagaaataat
      301 ggataagctt gaaagtatta ataatttttt tgcggattct gaaagtttac tcaaagaaat
      361 aaacaaagca atagaaaaaa atattgatat tttttctaag cttaatgaaa aatttcctaa
      421 tgtagagagt tttagtgaag ctttggaatt aaacaataaa gccaagaaga gttctaagga
      481 gattgtcgaa aatcttcaaa gcggacaaga tgaagtgatg atggcaatgg atgcgatgca
      541 gtatcaagat atacatcgtc aaaaaattga acgtgttatt aatgtgatgc gtgctttaaa
      601 tcattatatg agttctttat ttgaaagtaa aattgatgat aaaaaacgcg taagctctgc
      661 agttcacatt gaaggtgata gtactaatga tgttgtaagt aatgaggata tagaagcttt
      721 aattgcaaat ttagggcaaa aatgatcatt cctgaaatag tagctcctgc aggaaatttt
      781 acaaaattaa aaatcgcatt agcttatggt gcagatgcgg tttatgctgg tgtgaataat
      841 ttttctttaa gatcacgtac tgcaagagaa tttaactatg aaagttttga aaaagctata
      901 aaatatacgc atgagcgtgg taaaaagatt tatgttactt taaatggttt tcatttaagc
      961 tctcaaattg aaggtttaaa aagacatatt ttaaaattgc gtgaaatgaa acctgatgct
     1021 tttatcgtgg cttctgtggg agctatgcgt cttgttaaag aacttgcacc tgaaattgct
     1081 ttgcatgttt ctactcaagc aaatatttta aattatttag atgctcaagt ttataaggat
     1141 atgagtgcta aaagggtcgt gattgcaaga gaattagggc ttaaagatgc taaggcttta
     1201 aaagaaaatt gcgatattga acttgaagct tttgtacatg ggtctatgtg ttttgcttat
     1261 tcagggcgtt gtttgataag ttctgtgcaa agtggaagaa tgagtaatcg tggatcttgt
     1321 gcaaatgatt gtagatttaa ttatgaactt tatgccaaaa atccagaaaa cggtactttg
     1381 tttcgcttag aagaagatga aaacggtact catgttttta attctaaaga tttaaatctt
     1441 tgctcttata tagaaaaaat tatccaagaa aattgcatta gtgcttttaa aatagaagga
     1501 cgtactaaaa gtgaatatta tgttgcactc acaacaagaa cttataaaat ggctatacaa
     1561 gatgctttag agggtaagtt tgaaccaagc aagtatgaaa aagagattgc cacacttaaa
     1621 aatcgtggtt ttacagatgg ctatcttgtt tcacgccctt tagaaaaaac agatacacaa
     1681 aatcataata caagcataga agaaggttct catcaggtac atgctataag tgaagatgga
     1741 atttttttta aatgtaaagg aaaaatagtt ttaaatacac cttatgaaat tttaactcct
     1801 ttaaacgatg taattcaagt ttgtgataat gaattgggta aaatttatca aaaaaaggat
     1861 aaatattttg tagaatttaa aaagcttatt gccaaaaata ataaagaatt taacgaaatt
     1921 catagtggca atgaacatga aattcaatta ccaagcaaaa ttagcgcatt aagtttttta
     1981 agaaaggaaa tataaatgaa ttttatttct attttaatgg gaagtaagag tgattatgag
     2041 gttatgaaag aagctgctaa aactttggaa agttttggag taaaatatga acttattatt
     2101 tcatcagcac atcgtagtcc aaaaagaaca aaagaatata ttgtgagtgc tgaagaaaaa
     2161 ggtgcgaagg tttttattgc agcagctgga atggcggcac atttagccgg agtcgttgca
     2221 gcttatacaa caaaacctgt tttaggggtg cctatgtcag gaagtaatct tgcaagtatg
     2281 gattctttat tttctactgt gcaaatgcct agcggaattc ctgtaggaac tttagctatt
     2341 ggtaaggctg gggcgatcaa tgctgcttat ttggctatgc aaattttagc tatttatgat
     2401 actgatttag ctcaaaagct taaagaaaat cgtcttgaaa aagagaaaaa acttatatct
     2461 gattcaaaag aagtggaagt tttattataa ggggtaaaaa tgcaaaccta tcttgaactt
     2521 gaagaatttt gcaaacttgt gcatttaaat gaagatgtag ttaagagtat gatggcaaat
     2581 ggggctttga attttaaaga agaagagggt aagatttata ttgaggctca tcaaggtacc
     2641 tttagtgtgg tacctagtgc tgcaaaatct caacctgcaa tggtaaattc aatgacttta
     2701 gcaggagaaa gtttcgttga aaaaacaata ggaactattt taaatttaca tgaaaaagtt
     2761 ttagatgcta aagatgagac acttgaagca ttaaaaaatg aaaacaaatt tttaaaagat
     2821 gctctttatt ctatgcaaga actttatgat gcagatagaa aaactataga aactttaaat
     2881 aatgaactta aacatgcacg tgaagagata gaatttctta agcgtaagta taaattaatg
     2941 tggagtaaaa ctgcagaaat tttcggaact aagacagagc ctgatttaga aatgaataaa
     3001 aatttagaaa aacctgctga aaatacagaa caataaagag agatacaatg actttttcac
     3061 aaatgatact taatttgcaa aattattggc aagagcaagg ttgtgtgatt atgcagcctt
     3121 atgatatgcc agcaggtgca ggaacctttc atccagcaac ttttttaaga agtttaggaa
     3181 aaaaaccatg ggcggctgct tatgtggctc caagtagaag acctactgat gggcgttatg
     3241 gtgaaaatcc taatcgttta ggcgcttatt atcaatttca agttttaatt aaacctagtc
     3301 ctgataatat ccaagaatta tatcttaaaa gtcttgaaaa tttaggcttt gatttaaaaa
     3361 gtcatgatat tcgttttgtt gaagataatt gggagagtcc aagtttgggt gcttggggtt
     3421 taggttggga agtttggctt gatggtatgg aagtaactca atttacttat tttcaacaag
     3481 ttggcggtat agcagtggat ttagtaagtg ctgagattac ctacggtctt gaaagaatag
     3541 caatgtatct tcaaaatgtt gataatgttt atgatatagt ttggagtgaa tttaatggag
     3601 aaaaaattaa atacgcagat gtacataagc aaagtgaata tgaatttagc aaatataatt
     3661 ttgaagtaag tgatgttaag attttaaatg agcagtttga aaattcttac aaggaatgta
     3721 aaaatatttt agagcaagga ctggctttac ctgcttatga ttattgtatg cttaccgcgc
     3781 atacttttaa tcttttagat gcaaggggag caatttctgt agcacaaaga caagattata
     3841 tgttaaaaat tcgtgagctt tctaaaaatt gtgctgaaat ttataagaaa aatttaaatg
     3901 aaactgagta aaatttataa ttttttagat caattaagcc cttttaatac tcaagagtca
     3961 tgggataata gtggtatttt acttggagat aaggataatg aaatttcaac tgtttattta
     4021 agtttggata ttgatgaaaa tatcattaaa aaagcgagtg aaaattcttt aattatcaca
     4081 catcatcctt taattttcaa aggtttaaaa aatttatatg acaaggctta tcctagagct
     4141 ttcattaaag aaatgattta taaaaacatt tctttaatta gtatgcatac aaattacgat
     4201 ttaagtcatt taaatgctta ttttacagaa gaaattttag gttttaaaat ttcttctagg
     4261 gatgaatttt taatttatgt ggaaaattct atgtcttttg agaatttgtg tgattgggta
     4321 aaaaagaagt taaatttaca aaatttacgc ataagtgatt gtggtaaaaa agatattaag
     4381 cgtattgcca tatgtactgg aagtggcggg gatttgattt ccaagataga tgcggattgt
     4441 tttttaagtg gggattttaa atatcatcaa gccttagagg cgcttagcaa tcaaatgagt
     4501 cttattgatc taggtcattt tgaaagcgaa agatattttt ctcaatgttt agcaaaagac
     4561 ttgaaaaatt tgccgctaca agttataata acagtttcaa aaaatccatt tcaatatttt
     4621 taaggaaaat aaatgaataa atatctcgaa caattagtgc ttttatcaaa aatagatcaa
     4681 gaaattgata gttatgaacc aaaaatagac agtattaaca aaactttaaa agatgctgag
     4741 ttaaaaatag gcaaaatcaa tacagattta gaaaaaatta atgaagaaat taaagatata
     4801 gaaaatcaaa aagtacaaaa taatgctcat atttctgagt ttttggcaaa aattaaagag
     4861 ctttctaaaa aaagtggtgc agtaaaaaca gaaaaagaag ctaatgcttt aaagattgaa
     4921 gaagatattg caaaagaaca attagacgct gcaaatgatg agattataag attggataaa
     4981 attttagaca acaaaaaaac ttacaaaaaa gaacttgaag aagaaaaaat caaacaagaa
     5041 caaaatatta atgaaattag agtaagcatt aaatctgaaa tggaagtttt aaaaaaagat
     5101 agaatgagtg tttatgataa aaaaaacaaa cttgttggcg agatgaatca aaaggtttta
     5161 agtttctatg aaaaaattcg caaatgggca aaaaacactg ctgtagtacc tgttaaaaaa
     5221 caagcatgct atggatgctt tatgaaaatt tatgataaaa cttatttatc tgttgtaaaa
     5281 ggtgaagaaa ttgtaacttg tcctcattgt ggaagaattc tttataaaga gcaagaagaa
     5341 caagattgat ctttttttat tatttcctaa cttggatggc atttttattt tgtgccgtct
     5401 ttattctttt actttctttt ttaaaattta aatacaaaac cagcttaaaa tctcgttttt
     5461 ttctttataa aaatttacat caagaaaaag ctgatgtgca ttttcatgct tgttcttatg
     5521 gggaagtaag aagtattaaa tctttggttt tgaaatttga ttcaagagta actactatta
     5581 ctcagacagg ttttgagtgc gcaaaagaat tttgtaagaa ggtaaattat cttgtttttg
     5641 agaattttct acctttttgg tttaaacctt gtaaagtttt agtgattttt gaagcagaat
     5701 attggcttat gcttgtattt atagcgcgta tttataaagc taagattatt ttgcttaatg
     5761 caagaatatc tgataaatct tatcattctt atcaaagatt ttcttttttt tataaaaaaa
     5821 ttttttctta tgttgatgaa gtttttgcac aaagtgattt agataagata agacttgaga
     5881 gcttaggggc taaaaatgtt aaaattttta aaaatattaa ggcaaatttg gagattaaaa
     5941 agagccaaaa ttatatcaaa cctaaagaaa aacttgttat ttttgctagt acacataaag
     6001 acgaagaaga gcttttgctt gataatttta ctttagaaga aaatgaaaaa ctcatcatcg
     6061 ctccacgcca tcctgagcgt tttaaagaag ttgaaaattt gcttttcaat aaaggtttaa
     6121 aatttgaaaa atttagttct ttaaagggtc aaaataaaaa tttttctgaa aaaattttac
     6181 ttttagatgc tttaggagag ttggtaaatt tttatgcaat ttctgatgtt gttgtgcttg
     6241 gaggttcttt tatagaaggt ataggagggc ataatcctat agaagtggca cattttaata
     6301 atgtattaat tagtggaaaa tttattcata atcaaaaggt tttatttgaa gaagtagaaa
     6361 atgtatattt ttgtgagaat ttaaaagatt taaatgataa aattcatcgt ttaaatttaa
     6421 aagctaaaat ttctaaaaaa gaaaatttag atcttattgt gcaaaccata caaaagggaa
     6481 ttgatgcaag aaaaagctta taaaatctta gctttgcaag agaaaatttc aaatcgtgaa
     6541 gctaaggatt tgattgataa gggttgtgtt ttttcacatg gaaaaaaagt tgtagttgct
     6601 agagctttga tgagtgataa agtaaaattt aatgtgataa aaaccaaaaa tcctcaaatt
     6661 atttttgaag atgataagat tattgctatt aacaaacctt attcttgtgt aagtgaggat
     6721 ttggaaaaaa aaattaatgc taaactttta aatcgtttag ataaagaaac aagtggtgtg
     6781 attttgcttt gtaaagacga agattttaga aaactttgca tagaagaatt taaaaaacat
     6841 agagtttata aaagttatat tgcagtttta gatggggttt tggctgaaga gattgaagtt
     6901 aatgaaccta tttttactat aaaagcaaaa ggtggggcgt taagtaaagt ttcaaaagat
     6961 ggtttaaatg cttcaagtat aatcactcct atcatgatgc aatcaaaaaa aactctagca
     7021 aaaatagtaa ttcaaacagg cagaacgcat caaatcagag tgcatactaa atttataaaa
     7081 catggcgttg taggcgatga aaaatacgct aaaatctcaa gtgatagaat gtatttacat
     7141 agttatgaaa ttaaaatttt tgattatcat tttaaggcta atttagacag tagttttgaa
     7201 aaatttggct ttgagataaa aagtttagat ttttaaagac atttaagaaa aaattttgta
     7261 taatgcacag tttaatttta aaaattttat agaaaggtga taaagtgttt gaattaatca
     7321 gcgaatcttt taaatcagcg attaataaat tacgttttgt tgatgatgaa aaagcgctca
     7381 aaaacgcttt agaaacctta aaaaaaactc ttttaaaagc agatgttcat cataaggtaa
     7441 ctaaagagct tttaactcta atagaagaag atgtaaagca aaatggcata ggtcaacaac
     7501 aatttttaaa tgccattaag gtaaatttag aaaatatttt aagcatcaat ggtaaaaatc
     7561 aaggttttgt ttttgcttct aaacctccaa cagtagtttt aatggcaggt ttgcaaggag
     7621 gtggtaaaac tacaagcacc atcaagcttg caaattattt aaaattacgc aataaaaaag
     7681 ttttagttgc agcttgtgat ttgcagcgtt tggcggcagt ggagcagctg agacaacttt
     7741 gtcaagcaaa tggaattgaa cttttcttta tagaaaacga aaaagatcct attagggttg
     7801 ctaaagaggc tttggaaaaa gctaaaagtt ctatggtaga tgttttactt gtggatactg
     7861 ctgggcgttt ggctatagat gatactttga tgaatgaatt aaaagcagtt aaagacgttt
     7921 taaatcctga tgagattttt tatgttgctg atgcaatgag tggtcaggat ggagttaaaa
     7981 ctgcagctaa ctttaacgaa gctttaggta ttagtgggat aattttatca aaatttgatg
     8041 cagatactaa aggtggagta gccttaggta tagcaaaaca aataggcatt cctttaagat
     8101 ttattggtgt gggtgaaaaa gtagcagatt tagaagtttt tataccagat cgtattgtaa
     8161 gtcgtattat gggtgagggt gatttggcaa ctttagctga aaaaactgct gcagtgattg
     8221 atgaaaaaga ggctaaaaaa ctcaatcaaa aaattaaaaa aggtgagttt aattttaatg
     8281 attttatcaa tcaaatggaa agtattaaga aactaggaag tatgaagtct ttaatcggta
     8341 tgataccagg acttggcgga atggcaaatg ctgtaaaaga tatagatttg gataattcta
     8401 aggaaattgt acatattaaa gcaatgattt cttcaatgac tcctaaagaa agagaaaatc
     8461 ctgacttgtt gaataatgct agaaaacgtc gcatagcaga aggagcaggt ctttctcaaa
     8521 tggaagttaa tcgtttttta aaacaattta gcaatgcagc aaaacttgca aaaagatttt
     8581 caggtaaaaa aggaatggag agtttaacac agatgatgac tcaagctaga aggcagtttt
     8641 aaattttatt tataaatact ttttagaagt atttataaat aaaattttaa ttttcaagga
     8701 gtattaatga cagttgttag acttacaaga atgggtagaa ctaaaagacc attttatcgt
     8761 attgtagtta cagatagtag aaaacgccgt gatggaggct ggatagaaag cattggatat
     8821 tataatccta tggtagaacc ggaagtggtg aaagtcgata cagagcgttt ggcttattgg
     8881 aaaagtgttg gtgcaaaact tagcgataaa gttgcttcta tcactagtaa ataatcatgg
     8941 tagagaattt tcttagagaa tatgcaaaat taattgcaga ttatcctgaa cagattgata
     9001 ctcaaaaaat tgaattgggt gaaaattttt ttgaaattat tctttttgcg cataaggttg
     9061 atacaggtaa actgataggc aaaaatggaa aaatgatcaa tgctataaaa actgtaatct
     9121 ctgcttataa gagtaaagat gcaagttctt atagagtgac ggtaaaagca cttgagtgaa
     9181 aaagactttg ttcaagttgc aaagcttggt aaaactgtag gtcttaaggg ttatgtaaag
     9241 ttacataacc tgagtgattt ttcttctcaa tttaaaaaag atgctacttt ttttataaaa
     9301 aatactagag aaattttaaa gattaaacat tacaatataa gcagttctac tgttttattc
     9361 gaaaattatg aagatgtaga aaaagctaaa gagttaacca atcttattct ttttcagagt
     9421 attgaaaaaa gtagacaaac ttgtaaatta aaaaaagatg agttttttta ttttgatatt
     9481 ttagagtgtg aagtttttga agaagataaa agattaggta aagtgattga tatcttggag
     9541 accggatctt cttatttatt tgaaattcaa agtg
//
LOCUS       DAPWAA010000056         9439 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.056, whole genome shotgun sequence.
ACCESSION   DAPWAA010000056 DAPWAA010000000
VERSION     DAPWAA010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9439)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9439)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9439
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.056"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..247
                     /locus_tag="RTF91_001361"
     CDS             <1..247
                     /locus_tag="RTF91_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDZ4944234.1"
                     /translation="NKKNLFYQIKDFENLAKKRYERYENLGFWVCEGHYHQNHQINKD
                     NIKYLNLASFAYERSFFVVEYQQEIKFREQKLRGQNV"
     gene            240..1196
                     /locus_tag="RTF91_001362"
     CDS             240..1196
                     /locus_tag="RTF91_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HDZ4944235.1"
                     /translation="MFDENIVKTGSNEMELVDFRIFKQGHDKVYEGIYGVNVSKVREI
                     IKIPSLTELPGVPDYIEGIFDLRGVVIPVVNLAKWMQITEPESTMLKPRVIITEFSNI
                     LIGFIVHEAKRIRRINWKDIEPATFSTGSGALDKGKITGVTRIENDEVLLILDLESIV
                     EDLGIYAPKTDIDFGKIEKFSGTALILDDSMTARKRVKEMMQQMGFQVVEAKDGAEGI
                     NKLEELSQVYGQSLKDTLKIIISDVEMPQMDGFHFAAHIKGDPRFKDIPIVFNSSLSN
                     EFMNEKGVQEAGAEGYLVKFNASDFFNEIAKVIKKHQSQEQG"
     gene            1200..3509
                     /locus_tag="RTF91_001363"
     CDS             1200..3509
                     /locus_tag="RTF91_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDZ4944236.1"
                     /translation="MEDMQEILEDFLVEAFELVEQIDHDLVELESNPEDLELLNRIFR
                     VAHTVKGSSSFLNFDVLTKLTHHMEDVLNKARHGELKITPDIMDVVLESIDRMKTLLN
                     SIRDNGNDTAIGMDIEPICTRLTAISEGESPVAATDSNEKSTPQAEPETPKQEATTPE
                     PEVDVNQLSDSEVEAEIERLLKVRKAEDQARRAQKKQTANTAPKPTNNAANKPTESGE
                     KKVPASGSNASSMDQTIRVEVKRLDHLMNLIGELVLGKNRLLKIYDDVEERYEGEKFL
                     EELNQVVSQLSIITTDVQLAVMKTRMQPIAKVFNKFPRVVRDLSRELGKQIELEITGE
                     ETELDKSIVEEIGDPIMHMIRNSCDHGVEDPATRAANGKPEKGIVQLKAYNEGNHIVV
                     EITDDGKGLDPNGLKAKAIEKNLISEREADQMTDKEAFALIFKPGFSTAAKVTNVSGR
                     GVGMDVVKTNIEKLNGVIEIDSELGKGSSFKLKIPLTLAIIQSLLVGTQEEFYAIPLA
                     SVLETVRVPIDDIYTIEGKNVLRLRDEVLSLVRLSDVFGVKQVLESGDQTYVVVIGVA
                     ESKLGIIVDTLVGQEEIVIKSMGDYLQNIQGIAGATIRGDGRVTLIIDVGAMMDMAKE
                     IKVDIKAQLESSAKKPKEQPSDYKVLIVDDSKMDRTLMQKALEPLGVSLIEATNGVEA
                     LNIIKSGEHDIDAMLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRG
                     VEVGMTEYITKPYSPEYLENVVRKNLKLG"
     gene            3514..4029
                     /locus_tag="RTF91_001364"
     CDS             3514..4029
                     /locus_tag="RTF91_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-binding chemotaxis protein CheW"
                     /protein_id="HDZ4944237.1"
                     /translation="MSNEKLEQILQKQQTQMAGPVDQREDDIIQLVGFVVGDEEYAIP
                     ILNIQEIIKPIEYTRVPSVPDYVLGVFNMRGNVMPLIDLAQRFHLGSSKMTSQTRYIV
                     LRGENGTGVGGNAGFVIDRLTEAIKIHRNRIDPPPETLVKDKGMIYGIGKRDENILTI
                     LKVEALLKREF"
     gene            4029..4676
                     /gene="serB"
                     /locus_tag="RTF91_001365"
     CDS             4029..4676
                     /gene="serB"
                     /locus_tag="RTF91_001365"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HDZ4944238.1"
                     /translation="MIKLCVFDFDATLMDGETIDILATAHGKGNQTSEITRHAMAGEL
                     DFFESLQKRVSFLEGMSYKKVLELGNTLPLMHGAYDLIQYLKSKNIQIVIFSGGFHEG
                     IDPAMQKLGINLGFANYLHHKNGILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVM
                     CVGDGANDLAMFNESGLKIAFCAKEILCSQADVCIDTKDLKEIIKVINEKFFSLV"
     gene            4651..5637
                     /locus_tag="RTF91_001366"
     CDS             4651..5637
                     /locus_tag="RTF91_001366"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDZ4944239.1"
                     /translation="MKNFSLWCDFIENSFLDNKFLNLLSHGINGATSNPAIFKNAILN
                     SPIYKDKILKLKRKKAKDIYEELAIFDIQKAADKLAPLFYQKNDGFISIEIDPRLHDK
                     TTLSLGEAKRLYSAIGKENVMIKIPATKASYEVMYELMKNGISVNATLIFSLEQSQKC
                     FEALNTGLVEFRKNNISLKGQNTSLRTPQAVISIFVSRFDRLLNSKAKEQNRIGILNA
                     NLAYNNIHSKNEPNIRALFASTGVKGDDLPKDYYIKELLFENSVNTAPLDAIQAFKGI
                     ADFKKPLMNFEIYTALNQIISQDEREKACNDLLTDGLEQFCIAFEDILKALN"
     gene            complement(5634..6056)
                     /locus_tag="RTF91_001367"
     CDS             complement(5634..6056)
                     /locus_tag="RTF91_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5 YciO YrdC YwlC family protein"
                     /protein_id="HDZ4944240.1"
                     /translation="MIYLAQTDTTAGFLSENLEEINALKGRDKNQPCLITSAKFCELK
                     SLVRIPKTFKNLVRRSKKTTFIYPNNKAIRIVKECEHANFLSKNGYFYSSSANKHGKE
                     FDEEWARSVADIILDENFFENIPSRILKLSKNKIIKIR"
     gene            complement(6053..9322)
                     /gene="carB"
                     /locus_tag="RTF91_001368"
     CDS             complement(6053..9322)
                     /gene="carB"
                     /locus_tag="RTF91_001368"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDZ4944241.1"
                     /translation="MPKRTDIKSILLIGSGPIVIGQACEFDYSGTQAAKTLKELGYRV
                     VLINSNPATIMTDPEFADATYIEPITKESILSIIKKEKIDAILPTMGGQVALNVAMEV
                     YESGLLRDVKFLGANPEAIKKGEDRQVFKECMKKIGMDLPKSMYAYNYDEALKAVDEI
                     GFPLMIRASYTLGGAGSGVVYNMDEFKELANTALALSPIHEILIEESLLGWKEYEMEV
                     IRDRMDNCIIVCSIENIDPMGIHTGDSITIAPALTLTDKEYQIMRNASFAILREIGVD
                     TGGSNVQFAINPKNGRMIVIEMNPRVSRSSALASKATGYPIAKVATLLAVGFSLDEIK
                     NDITGTPASFEPVIDYIVTKIPRFTFEKFPGANTTLGTAMKSVGEVMAIGRTFKESIQ
                     KALCSLERSLSGFDRVKLEDRNDLVFKIRNPNEKRLLYVAQAFREGFSVEELYEFCKI
                     DPWFLTQIKEIVDFEEQIDMDILNNKALLRKAKIMGFSDKMIALLVNLKDNLELSQND
                     IYYARMKQKIIAEFSEVDTCAGEFEALTPYLYSSINVSELTQSKNETKDKKEKKVMII
                     GGGPNRIGQGIEFDYACVHASFALKDMGIKTIMYNCNPETVSTDYDTSDILYFEPIDF
                     EHLRAVIEREKPDGVIVHFGGQTPLKFAKRLSVFGTKIIGTSARVIDMAEDRKKFAEF
                     ITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGGRAMRVVNDEVELRLYMQ
                     EAVDASDKSPILIDQFLDNATEIDVDAICDGKDVYVAGIMEHIEEAGIHSGDSACSLP
                     PCNIDEKMQEIITQKTADIALNLGVVGLLNIQFALHNNELYMIEVNPRASRTVPFVSK
                     ATGIPLAKVATRVMWQGNLKEALKFYDTFKVVNFDAKILRPKTPKYMSVKEAVFPFAK
                     LSGSDLELGPEMRSTGEVMGISKDFANSYAKSQIASFNHLPEQGVVFISLKDKDKKYT
                     KKIAAEYVKLGFKLMATGGTCKEILESGFECELVHKISEGRPNVEDKLKNGEIHLVIN
                     TSDSHSFKGDTKKIRENIIRFKIPYFTNLRSALAGAKSIKAIQSKSCLDVKNLQEWLK
                     S"
BASE COUNT         3287 a         1551 c         1562 g         3039 t
ORIGIN      
        1 aaataaaaaa aatctttttt atcaaataaa agattttgaa aatttagcca aaaaaagata
       61 tgaaagatat gaaaatttag gattttgggt atgtgaagga cactatcatc aaaatcatca
      121 aattaataaa gataacatta aatatcttaa cttagctagt tttgcatatg agagaagttt
      181 ttttgtagta gaataccaac aagaaatcaa atttcgagaa cagaaattga ggggtcaaaa
      241 tgtttgatga aaatatcgtg aaaacgggtt caaatgaaat ggagcttgtc gatttccgta
      301 tctttaagca aggacacgat aaagtttatg aaggaattta tggtgtaaat gtttccaaag
      361 taagggagat tataaaaatc ccaagcctta cagaacttcc aggtgtacct gattacatcg
      421 aaggtatctt tgatcttcgt ggagtagtta tacctgtggt aaatcttgct aaatggatgc
      481 aaatcactga gccagaaagt actatgttaa aacctagagt cattattact gaatttagta
      541 atattcttat tggttttatt gttcatgaag caaaaagaat tcgtagaata aactggaaag
      601 atatagaacc agcaactttt tctacaggat caggtgcttt agataaaggt aaaatcacag
      661 gtgtaacacg cattgaaaat gatgaagtgt tactaatttt agatcttgaa agtattgttg
      721 aagatttagg aatttacgct ccaaaaacag atattgattt tggaaaaata gaaaaattta
      781 gtggaactgc acttatttta gatgatagca tgactgctag aaaacgcgtc aaagaaatga
      841 tgcaacaaat gggatttcag gttgttgaag ccaaagatgg tgcagaaggt ataaataaac
      901 tagaagaatt aagccaagtt tatggtcaaa gcttgaaaga cactttaaaa attataataa
      961 gcgatgttga aatgccacaa atggatggtt ttcactttgc tgcacacatt aaaggagatc
     1021 caaggtttaa agatattcct atagtcttta actcatcttt atcaaatgaa tttatgaatg
     1081 agaaaggtgt ccaagaagcc ggtgcagaag gttatcttgt taaatttaac gctagtgatt
     1141 tcttcaatga aattgctaaa gttatcaaaa aacatcaatc tcaagaacag gggtaaaata
     1201 tggaagatat gcaagaaata cttgaagact ttttggttga agcttttgag cttgttgagc
     1261 aaatcgacca tgatttagta gagcttgaat caaatccaga agatttagaa ttgttaaata
     1321 gaattttccg tgttgctcac acagttaaag gttcatcaag tttcttaaat tttgatgttt
     1381 taacaaaact aactcatcac atggaagatg ttttaaataa agcaagacat ggagaattaa
     1441 agataactcc agatatcatg gatgttgttt tagaatccat tgatagaatg aaaactttac
     1501 ttaattctat tagggataat ggtaatgata ctgctattgg tatggatata gagccaattt
     1561 gcacaagatt aacagctatt tcagagggag aatctcctgt tgcagcaaca gattcaaatg
     1621 aaaaatctac tccacaagct gaaccagaaa caccaaaaca agaagcaact actccagaac
     1681 ctgaagtaga tgtcaatcaa ctaagtgatt ctgaagttga agctgaaata gaaagacttt
     1741 taaaagttag aaaggctgaa gatcaagcgc gtcgtgcaca aaagaaacaa acagcaaata
     1801 cagcgcctaa accaactaat aatgcagcaa ataaacctac agaaagtgga gagaaaaaag
     1861 tccctgcttc gggtagtaat gctagtagca tggatcaaac catacgcgtg gaagtaaaaa
     1921 gattagatca cttaatgaac ctaattgggg agcttgtttt aggcaaaaac cgtttgctta
     1981 aaatttacga tgatgttgaa gaacgttatg aaggagaaaa attccttgaa gaacttaatc
     2041 aagttgtaag ccaactaagc atcattacaa ccgatgttca acttgccgta atgaaaacaa
     2101 gaatgcaacc tatagcaaaa gttttcaata aattcccaag agttgtacgc gatttaagtc
     2161 gtgagttagg aaaacaaata gaacttgaaa ttacaggtga agaaactgaa cttgataaat
     2221 ctattgtaga ggaaatcggc gatcctatta tgcatatgat tagaaactca tgcgatcatg
     2281 gcgttgagga tccagcaact cgtgcagcta atggaaaacc tgaaaaaggt atagtccaac
     2341 ttaaagctta taatgaaggt aatcatatcg ttgtagaaat tacagatgat ggtaaaggac
     2401 ttgatccaaa tggtttaaaa gcaaaagcta tagagaaaaa tttgattagc gagagagaag
     2461 cggatcaaat gacagacaaa gaagcttttg ctttgatttt caaacctggt ttttcaactg
     2521 cggctaaggt aacaaatgtt tcaggtcgtg gcgtaggaat ggatgttgtt aaaaccaata
     2581 tcgaaaaact taacggggta attgaaattg atagcgaatt aggcaaagga agttcattta
     2641 aacttaaaat tcctcttacc ttagcaatca ttcaatcttt actcgtaggg actcaagaag
     2701 aattctatgc aattccactt gcaagtgttc ttgaaacagt tagagtgcct attgatgata
     2761 tctatactat cgaaggtaaa aatgtattac gcttaagaga tgaagtgctt tctcttgtaa
     2821 gactttcaga tgtatttgga gttaaacaag tgcttgaaag cggcgatcaa acttatgttg
     2881 ttgttatagg ggtggctgaa agtaagcttg gtatcatagt agatactctt gtaggacaag
     2941 aggaaatagt tattaaatct atgggtgatt atttacaaaa tatccaaggt atagcaggag
     3001 ctacaatccg tggcgatggt agagttacat tgatcatcga cgtaggtgct atgatggata
     3061 tggctaaaga aattaaggtt gatatcaaag cacaactaga atcaagtgcg aaaaaaccta
     3121 aagaacaacc aagcgactat aaagtcttaa ttgtagatga ctctaaaatg gatagaacct
     3181 taatgcaaaa agctttagaa ccactaggag ttagtttaat tgaagcgaca aatggtgttg
     3241 aagcattaaa tattataaaa tctggcgaac atgatattga tgcaatgctt attgatattg
     3301 aaatgccaag aatggatgga tacaccttag ccggtgagat tagaaaatat tctaaatatc
     3361 gcaacctacc attgatagca gttacttcaa gaacaagtaa aactgaccgc ttaagaggtg
     3421 ttgaagtagg tatgaccgaa tacatcacca aaccttattc tccagaatac ctggaaaatg
     3481 tggttagaaa aaatttgaaa ctaggataag aatatgagta atgaaaaatt agagcaaatt
     3541 ttgcaaaaac agcaaactca gatggctggt cctgtcgatc aaagagaaga tgatatcatt
     3601 caacttgtcg gctttgtagt tggagatgag gaatatgcta ttccaattct taatatacaa
     3661 gaaatcatta aaccgataga gtacactaga gttcctagtg tgcctgatta tgttctagga
     3721 gtttttaata tgcgtggtaa tgttatgcca cttattgacc tagctcaacg ctttcatttg
     3781 ggtagttcta aaatgacctc tcaaacaaga tatattgttt taagaggcga aaatggaact
     3841 ggagtgggag gaaatgctgg ttttgttata gatagattaa ctgaagcaat caaaattcac
     3901 agaaacagaa tcgatccgcc acctgaaact ttagttaaag acaaaggtat gatctatggt
     3961 ataggaaaaa gagatgaaaa tattttaact atactcaaag tagaagcttt acttaaacgc
     4021 gaattttaat gattaaactt tgtgtttttg actttgatgc tactttaatg gatggtgaaa
     4081 ctatcgatat tttagctacg gcacatggca agggtaatca gacaagcgaa attacccgtc
     4141 atgccatggc tggagaactt gatttttttg aaagccttca aaaacgagta agttttttag
     4201 aaggtatgtc ttataaaaaa gttttagagt taggtaacac acttccatta atgcatggag
     4261 cgtatgacct tattcaatat ttaaaatcca aaaacataca aattgttatt tttagcggtg
     4321 gttttcatga aggtatagat cctgctatgc aaaaacttgg aattaacctt ggttttgcaa
     4381 actatttaca tcataaaaat ggcattttaa cagggctagt tggtggagaa atgatgtttt
     4441 caaattcaaa aggcttgatg ctacaacgat taaaaagctt tttaaatttg aaaacagatg
     4501 aagtaatgtg tgttggcgat ggggcaaatg atttagcaat gtttaatgaa agcggcttaa
     4561 agattgcatt ttgcgccaaa gaaattttat gttctcaagc tgatgtttgc atagatacaa
     4621 aagacttaaa agaaataata aaggtaataa atgaaaaatt tttctctttg gtgtgatttt
     4681 atagaaaata gttttttaga taacaaattt ttaaatttat tgtcacatgg aattaacggc
     4741 gctacttcaa atcctgctat ttttaaaaat gctattttaa attctcctat ttataaagat
     4801 aaaattctta aattaaaaag aaaaaaagca aaagatattt atgaagaatt agcaattttt
     4861 gatattcaaa aagcagctga taaactagct cctcttttct atcaaaaaaa tgatggattt
     4921 ataagtattg aaatagatcc aagacttcat gataagacaa ctcttagttt aggtgaggct
     4981 aaaagacttt atagtgctat tggcaaagaa aatgtaatga ttaaaattcc ggctacaaaa
     5041 gcttcttatg aagtaatgta tgaactcatg aaaaacggta ttagtgtcaa tgctaccttg
     5101 attttctctc ttgagcaaag tcaaaaatgt tttgaagctt taaatacagg tttagtcgaa
     5161 tttagaaaaa ataatataag cctaaaagga caaaatacta gcttaagaac tccacaagct
     5221 gttataagta ttttcgtaag tcgttttgac aggcttttaa actccaaagc taaagaacaa
     5281 aatcgtatag gaattttgaa tgcaaattta gcctataaca atatccactc aaaaaatgaa
     5341 cctaatattc gcgccttgtt tgcaagtact ggcgttaaag gagatgacct accaaaagat
     5401 tattatatca aagaacttct ttttgaaaat tctgttaata ccgctcctct tgatgcaata
     5461 caagcattta aaggaattgc agattttaaa aaacccttaa tgaattttga aatttataca
     5521 gcacttaatc aaattatttc tcaagatgaa cgagaaaaag cttgcaatga tttattaacg
     5581 gatggcttag aacaattttg tattgctttt gaagatattc taaaagcttt aaattaacgt
     5641 atttttatta ttttattttt tgaaagtttt agtattcttg atgggatatt ttcaaaaaaa
     5701 ttctcatcaa gaattatatc agcaacactt ctagcccatt cctcatcaaa ttcttttcca
     5761 tgcttattcg ctgaagatga ataaaagtag ccatttttac ttaaaaagtt tgcatgctca
     5821 cattctttta caatacgaat agccttatta ttcggataaa taaaagttgt ttttttggaa
     5881 cgacgcacta aatttttaaa agtttttgga attcttacca aactttttaa ctcgcaaaat
     5941 ttcgcagaag tgattaagca aggctgattt ttatctctac cctttaaagc attaatctct
     6001 tctaaatttt cacttaaaaa gcctgctgta gtgtccgttt gagccaaata aatcaagatt
     6061 taagccactc ttgcaaattt tttacatcta agcaagattt actctgtatg gctttaatcg
     6121 actttgcacc tgctaaagct gaacgcaaat ttgtaaaata aggtatttta aaacgaataa
     6181 tattttcacg aatttttttc gtatcgcctt taaaactatg actatcgctt gtattgatta
     6241 ctaaatgaat ttcgccattt tttaatttat cctcaacatt tgggcgtcct tctgaaattt
     6301 tatgtacaag ttcacattca aaaccacttt ctaaaatttc tttacaagtt ccccctgttg
     6361 ccataagttt aaaacctaat tttacatatt ctgcagcaat tttttttgtg tactttttat
     6421 ctttatcctt taaggaaata aataccacgc cttgttctgg aagatgatta aacgatgcga
     6481 tttgactttt tgcgtaagaa tttgcaaaat ccttgcttat acccataact tcacccgttg
     6541 aacgcatttc aggtcctagc tctaaatcac ttccactaag ttttgcaaac ggaaataccg
     6601 cttcttttac gctcatatat tttggagttt tagggcgtaa aattttagca tcaaaattaa
     6661 ccactttgaa agtatcataa aatttcaaag cttcttttaa atttccttgc cacatcacgc
     6721 gtgtcgccac ttttgccaaa ggaatacctg tagctttact aacaaatggc acagtacggc
     6781 tggctctagg atttacctct atcatataaa gctcattatt atgcaaagca aattgtatat
     6841 ttaaaagccc tacaacgcct aaatttaaag caatatctgc ggttttttgt gtaataattt
     6901 cttgcatttt ctcatcgata ttacaaggcg gtaaagaaca agcactatca cctgaatgaa
     6961 ttcctgcttc ttctatatgc tccataattc ctgccacata aacatcttta ccatcacaaa
     7021 tagcatctac atcgatttct gtagcattat ctaaaaactg atcgatcaaa atagggcttt
     7081 tatcgctcgc atctacagct tcttgcatat agagtctaag ctcaacctca tcatttacca
     7141 cacgcatcgc acgcccaccc aaaacataac ttggacgcac aagcacagga taacctatat
     7201 cactggcctt aagtactgct tcttccacac ttgttgcggt agaatttttt ggctgattga
     7261 tgcctagctt tgtaataaat tcggcaaatt tctttctatc ttctgccata tcaatcactc
     7321 ttgcactcgt acctataatc ttagttccaa aaacacttaa acgcttggca aatttcaaag
     7381 gagtttgtcc accaaaatgc acaatcactc catcaggttt ttcacgctca atcactgctc
     7441 ttaagtgttc aaaatcaata ggttcaaaat acaaaatatc acttgtatca taatcagtcg
     7501 aaacagtttc aggattgcaa ttatacataa tggttttaat gcccatatct ttaagtgcaa
     7561 aagaagcatg tacacaagca taatcaaatt ctatgccttg ccctatgcgg tttggtcctc
     7621 cacctataat catcactttt ttttcttttt tatctttagt ctcgttttta ctttgagtga
     7681 gttcgcttac attgatactt gagtaaagat aaggagttaa agcttcaaac tcacctgcac
     7741 aagtatctac ttcactaaat tctgcgatga ttttttgctt cattcttgca taataaatat
     7801 cattttgact taattctaaa ttgtctttca aatttacaag caaagctatc attttatctg
     7861 aaaaacccat aatttttgct tttcttaaaa gagctttatt gtttaaaata tccatatcaa
     7921 tttgctcttc aaaatctaca atttctttaa tctgcgttaa aaaccaagga tctattttac
     7981 aaaactcata aagttcttct acgctaaaac cttctctaaa agcttgtgct acataaagta
     8041 aacgcttttc attgggatta cgaattttaa aaacaagatc atttctatct tcaagtttta
     8101 ctctatcaaa accacttaaa gagcgttcaa gtgaacaaag tgctttttgt atgctttctt
     8161 taaaagtgcg tcctatagcc atgacctcac ccacactttt cattgctgta cctaaggttg
     8221 tgtttgctcc tggaaatttt tcaaaagtaa agcgaggaat tttcgttaca atgtaatcaa
     8281 tcacaggctc aaaacttgca ggagttcctg taatatcatt tttaatctca tctaaactaa
     8341 agcctactgc taaaagcgtc gcaaccttcg ctataggata acccgttgcc ttagaagcta
     8401 aagcacttga tcttgaaacc cttggattca tttctataac tatcattctt ccattttttg
     8461 gattgatagc aaattgcaca ttgcttccac ctgtatctac gccaatttca cgcaaaattg
     8521 caaaagaggc attacgcatg atttgatatt ctttatcggt taaggttaat gcaggagcta
     8581 ttgtaatgct atctcctgtg tgaataccca taggatcaat attttctata ctacaaacta
     8641 taatacaatt atccattcta tcgcgtataa cttccatttc atattctttc cagcctaaca
     8701 aactttcttc aattaaaatt tcatggatag gtgataaagc caaagcagta ttagcgagtt
     8761 ctttaaactc atccatatta taaaccacac cacttccagc accccctaaa gtgtaagaag
     8821 cacggatcat caaaggaaag ccgatttcat ctacggcttt taaagcttca tcataattat
     8881 atgcatacat agattttggt aaatccatac cgattttttt catacattct ttgaaaactt
     8941 gacgatcctc acctttttta atcgcctcag gatttgctcc taaaaatttc acatctctta
     9001 agagtccact ttcataaact tccatagcaa catttaatgc tacttgtcca cccatagttg
     9061 gcaaaatcgc atcgattttt tcttttttga tgatacttaa aatactttct tttgtgattg
     9121 gttctatata agttgcatct gcaaattcag gatctgtcat tatagttgca gggtttgagt
     9181 taattaatac aacgcggtat cctaattctt ttaaagtctt tgcagcttga gttccagaat
     9241 aatcaaattc acaagcttgc cctataacta taggaccact tcctataagt aaaatacttt
     9301 taatatctgt tcgttttggc ataaattttc ctaagagcat aaattcgggc taattataac
     9361 aaaattagtt ttataaattt aaaattatca atataatttt tattaagttt tactttttat
     9421 tttgtttcta gcctacaaa
//
LOCUS       DAPWAA010000057         9419 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.057, whole genome shotgun sequence.
ACCESSION   DAPWAA010000057 DAPWAA010000000
VERSION     DAPWAA010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9419
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.057"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            31..702
                     /gene="hsrA"
                     /locus_tag="RTF91_001369"
     CDS             31..702
                     /gene="hsrA"
                     /locus_tag="RTF91_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homeostatic response regulator transcription
                     factor HsrA"
                     /protein_id="HDZ4944242.1"
                     /translation="MRILVIEDEISLNKTIIDNLNEFGYQTDSSENFKDGEYFIGIRH
                     YDLVLANWTLPDGDGIELVNTIKHKSPRTSVMIMSSKTDKETEIKALKAGADDFVKKP
                     LDFDILLARIEARLRLGGTNVIKIEDLVIDPDEEKITYKGQDIELKGKPFEVLTHLAR
                     HSDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDKPLNISTIETVRRRGYRFC
                     FPKKS"
     gene            804..1049
                     /locus_tag="RTF91_001370"
     CDS             804..1049
                     /locus_tag="RTF91_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HDZ4944243.1"
                     /translation="MSLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECVND
                     FSEPACIVACPYECIIPDPDNVETIEELKLKHRNREF"
     gene            1049..2509
                     /locus_tag="RTF91_001371"
     CDS             1049..2509
                     /locus_tag="RTF91_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HDZ4944244.1"
                     /translation="MAKKTAVVDLGSNSIRMVIFEKTSRYSFYTTCEYKRKVRLGENA
                     YNNGKILQEEAMQRAEDALAFFKQCALKHKCKKIFIVGTSALRDALNSKIFIKRIKDN
                     LSLNIRCIDGKNESYLGGIAALNLLSPFKDGTTLDIGGGSSELCLIKNNKIISCISLD
                     VGTVRLKELFYDTGKMDSLEDFIKPILEQIPKEFCNQNLIAIGGSLRAISNSIMQKNS
                     YPLKNLHDFRYMLDEEKAHILKIFNSNLDSLVNFGIKKDRFDTIKEGIFIFLKIAKKI
                     KAKQVITSGVGIREGVYLQDLLRPKITFPPNFNPSLKCLQDKFLQSKQKNKTPHFALQ
                     IFTTLKNLHKLNDNYKYTLLNAAKLCHIGEHLNFYFANEHSAHFVLGGLNYGFSHKEK
                     ALIATIIKLNGKKVNPYNLEPYKQLLPNIHAISWLNFILCLAKTLSTNEDKIDFAFAN
                     NTLYIYQENKILNLPKDELKKIAKPATIALAINQKI"
     gene            complement(2506..3306)
                     /locus_tag="RTF91_001372"
     CDS             complement(2506..3306)
                     /locus_tag="RTF91_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944245.1"
                     /translation="MRLLILFFLILPLYSVELIGYNIYDRKDRVDLMLSFDNAYNGKI
                     SQKKEKNLTLFTFSDLIYSKDELKELNSQLVDKISISSKNNNTYIMLQNKQNVNLELS
                     SINDKFGVRIRAIEQGKTSIEPITSAPAVNNSQELIPKPKSTNLEEYDYTNYILVMLI
                     LVVLLIVLWWFKKAMIYKNNNVSRDFTMIFQRFLDKNNQLVVFDHANKRYTMIIGNSN
                     VLLESAEIPEEQTIKHTEKTEKNFDSFFEENKKRIQNLIEQRQKSKKS"
     gene            complement(3308..3616)
                     /gene="fliN"
                     /locus_tag="RTF91_001373"
     CDS             complement(3308..3616)
                     /gene="fliN"
                     /locus_tag="RTF91_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HDZ4944246.1"
                     /translation="MSDDIEFNIHHGLLQSYEDILDITVDFVSELGTANMSVAELLKL
                     EVGSVIDLEKPAGESVELYINKRIFGKGEVMVYEKNLAIRINEILDSKTVLQYFKKEI
                     "
     gene            complement(3616..4038)
                     /locus_tag="RTF91_001374"
     CDS             complement(3616..4038)
                     /locus_tag="RTF91_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HDZ4944247.1"
                     /translation="MLKILEYSITHFCEHILRLRIEEAQDISGELYGTSIPIMGKSEG
                     ECNFYLFFPKEFLKKIAEILINDEKFKEDDWCDLTKECANQIIGYAKNLLNDARGDDE
                     YKLGIPEYLGKVDFSRIVLDEALTYKFENCYFRIGYCK"
     gene            complement(4109..4858)
                     /locus_tag="RTF91_001375"
     CDS             complement(4109..4858)
                     /locus_tag="RTF91_001375"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDZ4944248.1"
                     /translation="MVDFKKFYKENANVAYMVLGYPDLKTSEAFLQRLDQSSIDILEL
                     GVAYSDPIADGEIIANAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGL
                     EKFVKKAKTLGICALIVPELSFEESGDLVKECEKYNIVLITLVSVTTPKERVKRLVKH
                     AKGFIYLLASIGITGTKSVEETILQNKVKEIRSFTNLPIFIGFGIQNNQDVKRMRKVA
                     DGVIVGTSIVKCFKQGNLNIIMKDIEEIFKK"
     gene            complement(4851..6029)
                     /gene="trpB"
                     /locus_tag="RTF91_001376"
     CDS             complement(4851..6029)
                     /gene="trpB"
                     /locus_tag="RTF91_001376"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDZ4944249.1"
                     /translation="MKRAYYGDFGGQFLPESAMFALNELENAFLKFSKDKQFKKEFNE
                     LLKTYVGRPTPLYFARNLSKKYQHEIYLKREDLNHTGAHKINNAIAQVLLAKKMGKKK
                     IIAETGAGQHGLATATAAALLGFECEIYMGETDVQRQALNVYKMELLGAKIHAVQSGL
                     KTLKEATTAAIQAWVGDIKNIFYVVGSAVGPYPYPKMVTHFQSIIGKECKMQLQKLNK
                     KVDYIIAAVGGGSNAAGIFYDFIKDENVKLIGIEAGGLGIDTPYHAATLNKGKTGIIH
                     GMKTKVLQDDLGNILPVHSVSAGLDYPGIGPLHSFLFESKRAQYHAINDEECMQALKL
                     LCKEEGIIAAIESSHALAFLEKLCPTLKKKSVIVVNLSGRGDKDMQTIREYKKGVIYG
                     "
     gene            complement(6026..6625)
                     /locus_tag="RTF91_001377"
     CDS             complement(6026..6625)
                     /locus_tag="RTF91_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HDZ4944250.1"
                     /translation="MLNLKICGIKDEKNAKDLALLNVEFFGLIFAQSSRQVSLEQARI
                     LSAIFHEKNKKVVGVFVDESLEQIIKYIEKIKLDGVQICRTITQEEFEILKIQNIFVW
                     QVISVENSLDLKSEIFADLVLFDAKGVLKGGNGISFDWALLKSYAKDFILAGGIGLDN
                     IDQAMKTGAKILDLNSKLEDEKGLKDIEKVKQILKELKK"
     gene            complement(6612..8213)
                     /gene="trpD"
                     /locus_tag="RTF91_001378"
     CDS             complement(6612..8213)
                     /gene="trpD"
                     /locus_tag="RTF91_001378"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDZ4944251.1"
                     /translation="MILLIDNYDSFVFNVKSMLEQVSNNEILVRRNDEISLNEIKNLN
                     PTHIILSPGPKHPSQSGVCLEIFKAKLDIPILGICLGHQALALAFNSLVVKMQEAVHA
                     KSSLIKQCKESELFVNLPSNFSVMRYHSLEVKQLSDELEILALDEKGVIMALKHKNLP
                     YYGVQFHPESYFSDYGLQIFSNFLKQDIKKSQKQEKRLSFYLQKMSENHFLQSDDFEQ
                     ICKIIISKDYEILQVAALLILITEKSLNEKSLSAFVRQILRYSQTFSDESEMIDICGT
                     GGDGFKSINVSTTSAFILGALGVKVAKHGNRAISSSSGSTDVLDALNIVTPNTLESVL
                     KQLNDQGLSFLHAPFFHPLIGELKEIRSRLGVRTVFNVLGPLLHPNLKLKYQLMGNYH
                     APVHRLLIEVLKNLGRKKALVVRGNDGMDELSICDESKIYELCEGEILEYSICPEQFG
                     FKRAFHSEIIGSSAYENAKDLRDILSGKMQGAKFDLVILNAMFALYTANKVSSPLAAK
                     DVILEAIYSGKVIEYFKEYQAYAKP"
     gene            complement(8210..>9419)
                     /locus_tag="RTF91_001379"
     CDS             complement(8210..>9419)
                     /locus_tag="RTF91_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HDZ4944252.1"
                     /translation="EKFENSYFAEDLTKVIIGIDCDYLDANELSFSEFKAKYYEASSK
                     NKICDFAGFFGVFSANFVSLFEKIPFSSKKNYDFPLFLFANAKAYLIYEKNSKMFFKI
                     GDSKYFEYLKDDFDLVKTQQENDFEILDSLEEEKNDFLKMCKKAKEYLLNGDIFQVVL
                     SKQLCIRHKVNAFDYYECLSTLNPSAYMFYFPSKYGIVLGSSPEFLLKIKKREIYLAP
                     IAGTRNLENNCDFLALEKELLSDEKELSEHKMLVDLARNDASKFGAQARVENLFSIIK
                     NKFVMHIVSEVYANMKEDASIFDVIEAVFPAGTLSGAPKIRALEIICELENCDRGVYG
                     GAVGFLNFNEDVTLAILIRSAFFTQDKAYLASGAGIVLQSDSQKEYAEICAKRKALLA
                     AFENLKKEKQ"
BASE COUNT         3318 a         1679 c         1106 g         3316 t
ORIGIN      
        1 tttaaatttt tcttaataag ggtaaaacaa atgagaattt tagttataga agatgagatt
       61 agcctaaata aaacaattat agacaatctt aatgaatttg gttatcaaac tgattcttct
      121 gaaaatttta aagatggaga atactttatt ggcattagac attatgattt agttttagca
      181 aactggactt tacctgatgg agatggaata gaacttgtta atactattaa acataaatct
      241 ccaagaactt cagttatgat catgtcttca aaaacagaca aagaaacaga gatcaaagcc
      301 ttaaaagccg gagctgatga ttttgtaaaa aaacctttgg actttgatat tttactcgca
      361 agaattgaag caagacttag acttggcgga accaatgtta ttaaaattga agacttggtt
      421 attgatccag atgaagaaaa aattacttat aagggtcaag atatagaact taaaggaaag
      481 ccttttgaag ttttaacgca tctagcaaga cattcagatc aaattgtctc caaagaacaa
      541 cttttagatg ccatttggga agagcctgaa cttgtaactc caaatgttat tgaagtagct
      601 attaatcaaa ttcgtcaaaa aatggataaa ccgttaaaca tatctaccat agaaacagtt
      661 cgtcgtagag gctaccgatt ctgtttccct aaaaaatctt aacaattttt gcacctttgg
      721 tgcaaaaatt ttgcctttat attttattta agtttggtta ttgtataaac taaaattatt
      781 ttttaaattt ttgaaaggtt atgatgtctc ttttaattac aaaagactgc gtatgttgtg
      841 atgcttgcag agaagaatgt cctgatgaag ctatttatga aaatagtcca atttatgtaa
      901 tagaccctga tctttgttca gaatgcgtta atgatttttc agagcccgct tgtattgttg
      961 cttgcccata tgaatgtatc attcctgatc ctgataatgt agagactata gaagaattaa
     1021 aacttaaaca tcgaaataga gaattttaat ggcaaaaaaa acagccgttg ttgaccttgg
     1081 ctcaaattcc attagaatgg tgatttttga aaaaacttct agatatagtt tttatacaac
     1141 ttgcgaatac aaacgcaaag taagacttgg agaaaacgct tataataatg gcaaaattct
     1201 tcaagaagaa gctatgcaaa gagccgaaga tgctttagct ttttttaaac aatgcgcttt
     1261 aaaacataaa tgcaaaaaaa tatttattgt aggaacatca gccttaagag acgctctaaa
     1321 ttcaaaaatt ttcattaaaa gaattaaaga taatttatct ttaaatatac gctgtataga
     1381 tggaaaaaac gaaagttatt taggtggtat tgcagcttta aatttattaa gcccttttaa
     1441 agatggaacc actttagata taggtggtgg atctagtgaa ttatgtttaa taaaaaacaa
     1501 taaaatcatt tcttgtatat cccttgatgt tggcactgtt aggttaaaag aattattcta
     1561 tgataccgga aagatggatt ctttagaaga ttttataaaa ccgattttag aacaaattcc
     1621 taaagaattt tgtaatcaaa accttattgc aataggtgga agcttaagag caatatctaa
     1681 ttctatcatg caaaaaaatt cctatccgct aaaaaattta catgattttc gctatatgtt
     1741 agatgaggaa aaggcgcata ttttaaaaat ttttaactca aacttagatt ctttggttaa
     1801 ttttggtata aaaaaagatc gttttgatac cattaaagaa ggtatattta tttttttaaa
     1861 aattgcaaaa aaaataaaag ccaagcaagt tatcacaagc ggagttggaa tcagagaggg
     1921 ggtttattta caagatttac ttcgccccaa aatcacattt ccaccaaatt tcaatcctag
     1981 tttaaaatgt ttgcaagata aatttttaca atcaaagcaa aaaaacaaaa ctccacattt
     2041 tgctttacaa atttttacaa cccttaaaaa tcttcataaa ctcaacgata attataaata
     2101 tactttatta aatgccgcta aattatgtca tattggagaa catttaaatt tctattttgc
     2161 taatgaacac tccgctcatt ttgtgctagg tggattaaac tatgggtttt cacacaaaga
     2221 aaaagcctta attgccacta ttattaaact taatggaaaa aaggttaatc cttataatct
     2281 tgaaccctat aaacaacttt tacccaatat tcatgctatt tcatggctca attttatttt
     2341 gtgcttagcc aaaactctaa gtacaaatga agataaaatt gattttgctt ttgcaaacaa
     2401 tactctttat atctatcaag aaaataaaat tctcaattta cccaaagacg agctcaaaaa
     2461 aatcgcaaaa ccagctacta tagcgttggc aatcaaccaa aaaatttaag attttttact
     2521 tttttgacgc tgttctataa gattttgaat tcttttttta ttctcttcaa aaaaagaatc
     2581 aaaatttttc tctgtttttt ctgtatgttt tattgtttgc tcttctggaa tttcagcact
     2641 ttctaaaagc acattagaat tacctattat cattgtataa cgtttattgg catgatcaaa
     2701 aactacaagt tgattatttt tatctaaaaa tctttggaaa atcatggtaa aatctctaga
     2761 aacattgtta tttttataaa tcatagcctt tttaaaccac caaagcacta ttaacaaaac
     2821 aactaaaatc agcattacta aaatataatt tgtataatca tattcttcca aatttgtact
     2881 ttttggttta ggtattaatt cttgagaatt atttacagca ggtgcagatg ttataggttc
     2941 aatacttgtt tttccttgct ctatagctct tattcttact ccaaatttat cattaataga
     3001 actaagttct aaattaacat tttgtttgtt ttgcaacata atataagtat tattattttt
     3061 agaactaata ctgattttat caacaagttg agaattaagt tcctttaatt catctttaga
     3121 atatattaaa tcactgaaag taaaaagggt taaatttttt tctttttttt gggaaatttt
     3181 gccattataa gcgttatcaa aagaaagcat caagtctact cgatcttttc tatcataaat
     3241 attgtaacca atcagctcaa cactatacaa aggtaaaatt aaaaaaaaca atattagcaa
     3301 tctcatttta aatttctttt ttgaaatatt gaagcacagt cttagaatct aaaatttcat
     3361 taatccttat ggcaagattt ttttcataaa ccataacctc accttttcca aaaattcttt
     3421 tattgatata aagctcaacg ctttctccag caggtttttc aagatcaata accgagccta
     3481 cttcaagttt taaaagctct gccacactca tatttgcagt tccaagctcg cttacaaaat
     3541 ctactgtaat atctaaaata tcttcataag attgcaaaag tccatgatga atattgaact
     3601 ctatatcatc actcattatt tacaatatcc tattctaaaa taacaatttt caaatttata
     3661 agttaaagct tcatctaaaa ctattctaga aaaatcaact tttcctagat attcagggat
     3721 tccaagttta tactcatcat cacctctagc atcatttaat aaatttttag catagcctat
     3781 aatttgatta gcgcattctt tagttaaatc gcaccaatcg tcttctttaa atttttcatc
     3841 attaattaaa atttctgcaa tcttttttaa aaattccttt ggaaaaaata aataaaaatt
     3901 acattctcct tcacttttcc ccataatagg aatacttgtt ccgtaaagtt caccgcttat
     3961 atcttgagct tcttcaatgc gcagtcttaa gatatgctca caaaaatgag taatggaata
     4021 ttcaagaatc tttaacataa ctaccacctt tataaaaaac ttaatttaaa attatagtaa
     4081 atataaaata aaaatatgtt ttaaaatttt attttttgaa aatttcttca atatctttca
     4141 ttattatatt caaatttcct tgcttaaaac actttactat actagttcct acaatcactc
     4201 catcagcaac ttttctcatc ctttttacat cttgattatt ttggatacca aaacctataa
     4261 aaataggcaa atttgtaaaa gatctgatct cttttacttt attttgtaaa attgtctctt
     4321 caacactttt tgtacctgta atacctatac ttgctaataa ataaataaat cctttagcgt
     4381 gttttactag tcttttaact ctctctttag gagttgtaac acttacaaga gtgattaaaa
     4441 ctatattgta tttttcacac tctttaacca aatcaccact ttcttcaaag cttaattccg
     4501 gtacaattaa agcgcaaatt cccaaagtct ttgctttttt tacaaatttt tctaaaccat
     4561 aagaaaaaat taaattataa taaaccataa aaaccaaagc tttcttagtt tttatcctag
     4621 ctaaaagctc aaaaacacta tgaatatcca caccttgatc tagagcgatt tttgcggcat
     4681 tagcaataat ctcaccatct gcgataggat cactataagc aacaccgagt tctaaaatat
     4741 caatagaact ttgatctaat ctttgtaaaa aagcttcact tgttttaaga tcaggataac
     4801 ctaaaaccat ataagctaca tttgcatttt ctttataaaa ttttttaaaa tcaaccataa
     4861 atcactcctt ttttatactc tctaatcgtt tgcatatctt tatctcccct acctgaaaga
     4921 ttcaccacta tcacgctttt tttctttaaa gttggacaaa gtttttctaa aaacgctaaa
     4981 gcatgtgaac tttcaatcgc tgcgataata ccttcttctt tgcaaagcaa ttttaaagct
     5041 tgcatgcatt cttcatcatt aatagcatga tattgtgctc ttttactctc aaacaaaaag
     5101 gaatgtaaag gaccaattcc tggataatca agacccgcag aaacactatg tacaggcaaa
     5161 atattaccta agtcatcttg taaaacctta gttttcatac catgaataat acctgtttta
     5221 cccttgttta aagtagctgc atgataaggc gtatcaatgc caagtccccc tgcttcaatg
     5281 cctataagtt taacattttc atctttgata aaatcataaa atattcctgc tgcattactt
     5341 ccgccaccaa cagctgcgat gatataatct acttttttgt tgagtttttg aagttgcatc
     5401 ttgcattctt ttcctatgat actttgaaaa tgtgttacca ttttaggata aggataagga
     5461 cctaccgcac ttccaaccac ataaaaaata tttttaatat ccccaaccca agcttgaata
     5521 gccgcagtag tcgcttcttt taaggtttta agaccgcttt gcaccgcatg aattttagca
     5581 cctaaaagtt ccattttata aacatttaaa gcttgtcttt gtacatcagt ttcccccatg
     5641 taaatttcgc attcaaaccc taaaagtgcc gctgcagttg ccgttgcaag cccgtgttgc
     5701 cctgctcctg tttctgctat gatttttttc tttcccattt tttttgctaa aagaacttga
     5761 gctatagcat tattgatttt atgcgctccg gtatgattta aatcctcgcg ttttaaataa
     5821 atttcatgtt gatatttttt gcttaaattt ctagcaaaat aaagtggagt aggacgccct
     5881 acataagttt ttaaaagttc attaaattct tttttaaact gcttatcttt agaaaatttc
     5941 aaaaaagcat tttccaactc atttaaagca aacattgcac tttcaggcaa aaactgccca
     6001 ccaaaatctc cataatatgc ccttttcatt tttttagctc ctttaaaatt tgttttactt
     6061 tttctatatc ttttaaacct ttttcatctt caagttttga attaagatcc aaaattttag
     6121 ctcctgtttt catagcttga tcaatattat ctaaacctat acctccagct aatataaaat
     6181 ctttagcata agactttaac aaagcccaat caaagcttat tccattgcca ccttttaaaa
     6241 ctcccttagc atcaaaaagt accaaatcag caaaaatttc actttttaaa tctaaactat
     6301 tttctacgct aatcacctgc caaacaaaaa tattttgtat ctttaaaatt tcaaactctt
     6361 cttgagtgat agtacgacaa atttgcactc catcaagctt tattttttcg atatatttaa
     6421 taatttgctc tagactttca tctacaaaaa caccgacaac ttttttattt ttttcatgaa
     6481 aaatcgcact taaaattctt gcttgctcta aacttacttg tcttgaactt tgagcaaaaa
     6541 taagcccaaa aaattcgaca tttaaaaggg ctaaatcctt agcatttttt tcatctttaa
     6601 taccacaaat tttaaggttt agcataggct tgatactcct taaaatactc tataaccttg
     6661 cctgaataaa tagcttctaa aatcacatct ttagccgcta aaggcgaact tactttatta
     6721 gccgtataaa gagcaaacat tgcatttaaa atcactaaat caaattttgc tccttgcatt
     6781 ttaccgctta aaatatctct taaatcctta gcattttcat atgcgctaga tcctataatt
     6841 tcactatgaa aagccctttt aaaaccaaac tgctcaggac aaatagaata ttctaaaatt
     6901 tctccttcac aaagttcata aattttactc tcatcacaaa tacttagctc gtccatacca
     6961 tcatttcctc ttactactaa ggcttttttg cgtcctaaat tttttaaaac ttctatcaaa
     7021 agtctatgta caggtgcatg atagtttccc ataagttgat attttaactt taaattagga
     7081 tgtaacaaag gacccaaaac attaaaaaca gttcttactc caagccttga cctgatctct
     7141 ttaagctctc ctattaaagg gtgaaaaaag ggagcatgta aaaaactaag tccttgatcg
     7201 tttagctgtt ttaagactga ttctaaagtg ttcggagtaa cgatatttaa agcatctagc
     7261 acatctgtac ttccactaga actcgaaata gcacgatttc catgtttggc tacttttacc
     7321 cccaaagctc ccaaaataaa agcacttgtc gtagaaacat tgatactttt aaagccatct
     7381 ccgcctgttc cgcaaatatc aatcatttca ctctcatcac taaaagtttg agaatatctt
     7441 aaaatttgtc ttacaaaagc acttaaagat ttttcattta aagacttttc tgtaattaaa
     7501 atcaacaaag ctgctacttg caaaatttca tagtctttag atataatgat tttacaaatt
     7561 tgttcaaaat catcgctttg caaaaaatga ttttcgctca ttttttgcag ataaaaactc
     7621 aaacgctttt cttgtttttg tgattttttt atatcttgct tcaaaaaatt agaaaaaatc
     7681 tgtaagccat aatcactaaa ataactttca ggatgaaatt gcacgccata ataaggcaaa
     7741 tttttatgct ttaaagccat aatcacaccc ttttcatcaa gagctaaaat ttcaagctca
     7801 tcactaagct gcttaacttc taaagaatga taacgcatca cgctaaaatt tgaaggcaaa
     7861 ttaacaaata attcactttc cttgcattgt tttatcaaag agctttttgc atgcacggct
     7921 tcttgcatct taactactaa agaattaaaa gctaaagcta aagcttgatg tcccaaacaa
     7981 atacctaaaa taggaatatc aagcttagct ttaaaaattt caagacaaac tccactttga
     8041 cttggatgct ttggaccggg acttaagata atatgagtag gatttaaatt tttaatttca
     8101 ttgagtgaaa tttcatcgtt tcttcgcact aaaatttcat tattactcac ttgttctaac
     8161 atgcttttaa cattaaaaac aaaagaatca taattatcga ttaaaagtat cattgctttt
     8221 ccttttttaa attttcaaaa gccgctaaaa gcgccttgcg tttagcacag atttctgcat
     8281 actctttttg actatcactt tgcaaaacaa tgcccgctcc acttgctaaa taagccttat
     8341 cttgagtaaa aaaagccgaa cggatcaaaa tcgctaaagt cacatcttca ttaaaattta
     8401 aaaatcctac cgcaccacca taaaccccac gatcacaatt ttcaagctcg caaataatct
     8461 ctaaagctct tattttagga gctccactta aagttcctgc tggaaaaact gcttcaatca
     8521 catcaaaaat actcgcatct tctttcatat tggcataaac ttcgctgact atatgcatta
     8581 caaatttatt tttaataata gaaaaaagat tttcaactct tgcctgagca ccaaatttag
     8641 aagcatcatt tcttgctaaa tccacaagca tcttatgttc gctaagttct ttttcatcac
     8701 ttaaaagttc tttttctaaa gccaaaaaat cacaattatt ttctaaattc ctagttcctg
     8761 caataggcgc taaataaatc tctctttttt taatttttaa taaaaactct ggagaagagc
     8821 ctaaaacaat accatattta ctcggaaaat aaaacatata agcacttgga tttaaagtgc
     8881 tcaaacactc ataataatca aaggcattta ctttatgcct aatacaaagt tgtttactta
     8941 aaaccacttg aaaaatatct ccatttaaaa gatactcctt agctttttta cacattttca
     9001 aaaaatcatt tttttcttct tctaaagagt ctaaaatttc aaaatcattt tcttgttgtg
     9061 ttttaactaa atcaaaatca tccttaagat attcaaaata ttttgaatcg ccaattttaa
     9121 aaaacatttt actatttttc tcataaatca aataagcttt ggcatttgca aacaaaaata
     9181 aaggaaaatc ataatttttc ttagaagaaa atggaatttt ctcaaataaa gatacaaaat
     9241 tagcactaaa aaccccaaaa aatcccgcaa aatcacaaat tttattcttg cttgaagctt
     9301 cataatattt tgctttaaac tcactaaatg ataattcatt agcatctaaa taatcacaat
     9361 caatccctat aatcacctta gtcaaatcct ctgcaaaata agaattttca aatttttca
//
LOCUS       DAPWAA010000058         9130 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.058, whole genome shotgun sequence.
ACCESSION   DAPWAA010000058 DAPWAA010000000
VERSION     DAPWAA010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9130
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.058"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            110..1780
                     /gene="ggt"
                     /locus_tag="RTF91_001380"
     CDS             110..1780
                     /gene="ggt"
                     /locus_tag="RTF91_001380"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HDZ4944253.1"
                     /translation="MRYLAIFAISITLSFGAANPPIQDRTGTGLVLSTYELANKIGKE
                     VLDKGGNAIDAAVAVGYALAVVHPAAGNIGGGGFAVIHLANGENTTLDFREMAPLKAS
                     RDMYLDSKGEVIKDASTIGYLAAGVPGTVKGMSAMLDRYGTMKLKDLIAPAIKLAEKG
                     FLISDRQEQTMLEAKDMFKKFPSSSKYFLKEDGSTYKSGDLFIQKDLAKTLKLIAKEG
                     PDAFYKGKIADLIASDMVKNKGIITKEDLAQYQVIWRKPVKGTYRNYDIISMAPPSSG
                     GAIIIQILNIMENANIENLGFASSKTLHIMAEAMRQAYADRSEYMGDPDFVKIPLDKL
                     TSKEYAKEIYAKIPKDKALPSSKVKPGLGQIHEGHNTTHYSVLDGKGNAVSITYTINA
                     SYGSGAAVEGAGFLLNDEMDDFSIKPGVPNLYGVVGGDANAIEPKKRPLSSMSPTIIL
                     KDGKVFMVVGSPGGSRIITTVLQVISNVIDHKMDISTAVEAPRFHMQWLPDEIRIEPF
                     GIIKDVQNNLEKMGYKITEKPYMGDVNAIMIDPKTGKIVGSMDTREEF"
     gene            complement(2103..2219)
                     /gene="rrf"
                     /locus_tag="RTF91_001381"
     rRNA            complement(2103..2219)
                     /gene="rrf"
                     /locus_tag="RTF91_001381"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(2394..5300)
                     /locus_tag="RTF91_001382"
     rRNA            complement(2394..5300)
                     /locus_tag="RTF91_001382"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(5951..6027)
                     /locus_tag="RTF91_001383"
     tRNA            complement(5951..6027)
                     /locus_tag="RTF91_001383"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5991..5993),aa:Ile,seq:gat)
     gene            complement(6035..6110)
                     /locus_tag="RTF91_001384"
     tRNA            complement(6035..6110)
                     /locus_tag="RTF91_001384"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6075..6077),aa:Ala,seq:tgc)
     gene            complement(6213..7725)
                     /locus_tag="RTF91_001385"
     rRNA            complement(6213..7725)
                     /locus_tag="RTF91_001385"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(8181..8714)
                     /locus_tag="RTF91_001386"
     CDS             complement(8181..8714)
                     /locus_tag="RTF91_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944254.1"
                     /translation="MKRILVLLACLCGISFAQNAYIFNEKVEVLDAKSKKAVGEIYEG
                     TKVEVLKKEGDMSLIKVSGSVVENDPKTLAFSQNGIYVLVKLKNQNVSPVMEFWVKNK
                     DLTEKEIEAWDEVELAYYDTCTSCHAAHKPKEHLMEEWDAYLSAMQGFAKITDEEKAR
                     ILRFLQSHASNGPVDLN"
     gene            complement(8717..>9130)
                     /locus_tag="RTF91_001387"
     CDS             complement(8717..>9130)
                     /locus_tag="RTF91_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001979875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin sulfoxide reductase"
                     /protein_id="HDZ4944255.1"
                     /translation="YRIHSQLDNTWVRDLYKIQGREPVVINNEDAKKLGINHGEVVEV
                     YNERGSLLAGAFVTDKIMPGVVSIQEGAWYDPEDINDSKPRCNAGHVNVLTSSRPTST
                     MAQATSVNTCLVAIRKVKDAVKPYKSTTPPEIIGA"
BASE COUNT         2760 a         1987 c         1592 g         2791 t
ORIGIN      
        1 acaaatttct aaaattttaa atatttttac aaaaatatat cattttttaa atttataaat
       61 acctctaact tcattataat aattctaaat attatttaaa aggagtaaaa tgcgttattt
      121 agctatattt gcaatttcaa ttacgctaag ctttggtgca gccaatccac ccatacaaga
      181 tagaacaggc acaggacttg ttttatcaac ttatgaacta gctaacaaaa taggtaaaga
      241 agttcttgac aaaggcggaa atgctataga tgcagctgta gccgtaggct atgctttagc
      301 tgtggtgcat cctgcagcag gaaacatagg tggtggaggt tttgcagtca ttcatctagc
      361 aaacggagaa aataccacgc ttgattttag agaaatggca cctttaaaag caagtagaga
      421 tatgtatctt gatagcaaag gggaggttat caaagatgct tcaactatag gttatttggc
      481 tgctggagta ccaggaacgg ttaaaggtat gagtgctatg cttgatcgct atggcaccat
      541 gaagttaaaa gacttgatag cacctgctat aaaattagct gaaaaaggtt ttcttatcag
      601 tgatagacaa gaacaaacca tgctagaagc taaagatatg tttaaaaaat ttcctagttc
      661 aagtaaatat tttcttaaag aagacggtag tacttataaa agtggggatt tatttatcca
      721 aaaagatcta gcaaaaactt taaaacttat cgccaaagaa ggtcctgatg ctttttataa
      781 aggaaaaatt gctgatttaa tagcgtctga catggtaaaa aataaaggta ttatcactaa
      841 agaagatcta gcacaatacc aagtcatttg gagaaaacct gtaaaaggca cttataggaa
      901 ctatgacatc atttctatgg ccccacctag cagtggaggt gctataatca tccaaatttt
      961 aaatatcatg gaaaatgcca atatagaaaa tttaggtttt gcaagctcta aaactttaca
     1021 tataatggct gaagctatgc gtcaagctta tgctgataga tcagaataca tgggtgatcc
     1081 tgattttgta aaaatcccac ttgataaact cacaagcaaa gaatacgcca aagaaattta
     1141 tgcaaaaatt ccaaaagaca aagccttgcc aagttcaaaa gttaaaccgg gtttagggca
     1201 aattcacgaa ggacataata ccactcatta ttctgtatta gatggcaagg gtaatgctgt
     1261 aagtattact tatacaatca atgcaagcta tggttcaggt gctgctgttg aaggagcagg
     1321 atttttactc aatgatgaaa tggatgactt ttcaatcaaa ccaggagtgc caaatttata
     1381 cggagttgta ggtggagatg ccaatgctat agaaccgaaa aaaagacctc taagctctat
     1441 gagtccaact atcatactaa aagatggaaa agtatttatg gtagtaggta gtccaggtgg
     1501 ctctaggatc atcacaacag ttttacaagt gatttccaat gtgattgatc ataaaatgga
     1561 tatatcaacc gcagtagaag ctccaagatt tcacatgcaa tggttacctg atgagattag
     1621 gatagaacct tttggaatca tcaaagatgt gcaaaacaat cttgaaaaaa tgggatataa
     1681 aatcaccgaa aaaccttata tgggtgatgt aaatgctatc atgattgatc caaaaactgg
     1741 aaaaatagta ggctctatgg atacaagaga agaattttaa aatcataact tgtctttgaa
     1801 ttttcaaaga caagtcttaa aaaactattc taatttacgt taaagatcgg aaaagttttc
     1861 aaagaatgtg taagtaaaat ttaatttatt atcctcactt tttaaaccct ataatttaat
     1921 ttctaaacat agtaaaacca actaaactaa aaacagtata aatataaaac catattttat
     1981 actttttaaa cttttgaaat ttaaaatttc atattggaat tattattttt acttaaacct
     2041 taaaaagaat agataattaa aaaataaaat attatttgta taacaatgca gataaattaa
     2101 caagtccgca atgagctact ttccccctgc cagtaaggcg tagtatcatc acccacgatg
     2161 tgcttagctt cttggttcgg gatggagcaa ggcgtttcca catctgtata atcacggaca
     2221 ttgttattta aatattcttt taatagaaca cttaaaaaac aatgttaaga gcaagttcta
     2281 atacaaactt tacttgaaag attttattaa acttgaatta ttgtttatac acttaaatat
     2341 aaaaatatcc aaagctttaa gtaaaaacct taacaaggaa gtgatgcttt attaaagata
     2401 agccaaacgc tctattagta ctggtcagct aaaagacttt catccattac acacccagcc
     2461 tatcaaacta gtagtcttct agagagctta gagaagattc atcttagagt tggcttcacg
     2521 cttagatgct ttcagcgttt atcctttcca aacttagcta cgctgcgatg ctcttggcag
     2581 aacaacagct acaccagtgg tttgttcaac ccggtcctct cgtactaggg tcaaatctct
     2641 tcaatcttct tacgcccacg gcagataggg accgaactgt ctcacgacgt tctgaaccca
     2701 gctcgcgtac cgctttaaat ggcgaacagc catacccttg ggacctgctc cagccccagg
     2761 atgcgatgag ccgacatcga ggtgccaaac ctccccgtcg atgtgagctc ttgggggaga
     2821 tcagcctgtt atccccgggg taccttttat cctttgagcg atggcccttc cacacagaac
     2881 caccggatca ctaagaccga ctttcgtctc tgcttgactt gtatgtcttg cagttaagct
     2941 ggcttatacc tttatactct acgaacgatt tccaaccgtt ctgagccaac ctttgtaagc
     3001 ctccgttatt atttgggagg cgaccgcccc agtcaaacta cccaccagac attgtcccac
     3061 ttgaggataa ctcaagctgg ttagctaccc aaataagaaa gagtggtatc tcaacaatgg
     3121 ctcctataca actagcgtca tatactcaaa gcctcccacc tatcctgcac attcttatcc
     3181 aaatagcagt gtcaagctgt agtaaaggtc cacggggtct ttccgtcttg ccgcgggtag
     3241 gaggaatttt cacctccact acaatttcac tggatccctc tttgagacag ctcccatctc
     3301 gttacgccat tcatgcaggt cggtatttaa ccgacaagga atttcgctac cttaggaccg
     3361 ttatagttac ggccgccgtt tactcgggct tcgatcaaga gcttcgctaa tgctaacccc
     3421 atcaattaac cttcgagcac cgggcaggcg tcacacccta tacatcctct tacgagttag
     3481 cagagtgctg tgtttttggt aaacagtcgg gagggactct ttgttgtaag tttcttcgct
     3541 ttcggagtaa atcctagtac gaagctaacc acaccttata ccgaagatac ggtgctattt
     3601 tgcagagttc cttaaagaga gttcttccac gcgccttaga atactcatcc cacccacctg
     3661 tgtcggttta cggtacgggc aacattagct aaacttagaa acttttcttg gctcgacggc
     3721 atcaggggtt cttctatcca tccgaagact tcaaaaagcc tttcagttct cggagtatgt
     3781 tatacggatt tgcctgtata acctcctacg accttagact agcacttcca tccgctagcc
     3841 cccttagccc taagcgtcct tccatcgcac actaatgttg gtattggaat attaaccaat
     3901 ttgccatcgt ctaccccttt cggactcgac ttaggacccg actaacccta cgatgacgag
     3961 catcgcgtag gaaaccttgg gtttacggcg ttaatgattc tcacattaat tatcgctact
     4021 catgcctgca tgctcacttc tattcgctcc agcactcctt accggtatac cttcgacgca
     4081 aatagaacgc tctcctacca cttgacaaag tcaagtctac agcttcggta cttactttag
     4141 ccccgttata ttttccgcgc aaaatcacta gaccagtgag ctattacgct ttctttaaag
     4201 gatggctgct tctaagccaa cctcctggtt gtttaagtaa cttcacatcg ttttccactt
     4261 aagtaagatt tagggacctt agctggtagt ctgggttgtt tccctcttga cgacggattt
     4321 tatcactcgc cgcctgactg ctgtgattac atataaggta ttcggagttt gatagggttt
     4381 ggtacattgg tgtatgccct agcccattca gtgctctacc cccttatatt acgacacaac
     4441 gctataccta aatatatttc ggagagaacc agctatcacg aagtttgatt ggcctttcac
     4501 ccctatccac aagtcatccc ggggcttttc aacgcctatg ggttcagtcc tccactagtt
     4561 cttacactag cttcaacttg ctcatggata gatcacttcg tttcgggtct gcagcatctg
     4621 actaagcgcc ctattcagac tcgctttcgc tacggcttcg cgtttgctta accttgccag
     4681 acaccacaac tcgcaggctc attatgcaaa aggcagtcca tcacactgta ttgctacata
     4741 gtgctctgaa tgattgtaag caaatggttt caggttctat ttcactctga tcacctcagt
     4801 tcttttcacc tttccctcac ggtacttgtg cactatcgat ctggtattag tatttagggt
     4861 tggatcgtgg tcgacccgga ttcagacagg attcctcgtg tcccgcccta ctcaggatac
     4921 tgctagctaa agtttgtttt tcgcatacgg gactatcacc ctctatggct atactttcca
     4981 gaatgttctg ctaaactcac ctcttgcaca ttgcagtcct acaaccccca gtgcaagcac
     5041 tgggtttgcc ctcttgcgct ttcgctcgcc gctactgacg caatctctat tgatttcttt
     5101 tcctgagggt actaagatgt ttcaattccc ctcgttcgct cctatatagg taatgtatat
     5161 ctctatacat tgggttgccc cattcggaaa tctacggatc aaagcttctt gacagctccc
     5221 cgtagcttat cgcagtctag tacgtccttc atcgccttta ccagtcaagg catccaccat
     5281 tcgctcttag tagcttacct ttttgatgtt cttttagcgg atgagaaagc ccacctaaag
     5341 aaccaaagct aaagacctac cccgccaagc ctaagagata ttagactaaa aaagcgtaat
     5401 aagctaaaac tatttataag ctaaaagcta ataaataaat tcatctaaat actaattaaa
     5461 aaattaatat agataatgaa aactttagtt cttaatcact aaaaagaaca atttgtataa
     5521 aagctagata aatctaactt ctacctttat tattaattct aaaacgcatc acttccttgt
     5581 taaagttttt atgataagac ttatttatct taagacggaa agcattcaaa cacttaatat
     5641 aaaactaaaa taacttaatt ctaaataagc tgtgagtttg aaacttgtct ttagcattga
     5701 ctaaagaaaa gataaatggg ttttatcctt taacaagtcc tgtaaaattg tttttattaa
     5761 aacttgcttg tgactcttaa caatgataat taaaaagaac atttaggttt aaaacctaaa
     5821 ggaagtatat gattaaagta ttatttattt atacctaaag ttaaaaataa atctaaatat
     5881 agctatatta tttttaacat actttatata cttgctttag attttaaagc ttattcaaat
     5941 cttttttata tggtgggcct aacaagactt gaacttgtga cctcaccctt atcaggggtg
     6001 cactctaacc agctgagcta taggccctta aaaatggtgg agaatagcgg gatcgaaccg
     6061 ctgacctcct gcgtgcaaag caggcgctct cccagctgag ctaattcccc ataaacaatt
     6121 agctttatca tcaatctttg aaatctaaac aagaatcaat tgagtttata tattgaagta
     6181 atagttgtga gacttattac tttgtactct agaaaggagg tgatccaacc gcaggttctc
     6241 ctacggttac cttgttacga cttcacccca gtcgctgatt ccactgtgga cggtaactag
     6301 tttagtattc cggcttcgag tgaaatcaac tcccatggtg tgacgggcgg tgagtacaag
     6361 acccgggaac gtattcaccg tagcatggct gatctacgat tactagcgat tccggcttca
     6421 tgctctcgag ttgcagagaa caatccgaac tgggacatat tttatagatt tgctccacct
     6481 cgcggtattg cgtctcattg tatatgccat tgtagcacgt gtgtcgccct gggcataagg
     6541 gccatgatga cttgacgtcg tccacacctt cctcctcctt acgaaggcag tctatttaga
     6601 gtgctcggcc gaaccgttag caactaaata cgtgggttgc gctcgttgcg ggacttaacc
     6661 caacatctca cgacacgagc tgacgacagc cgtgcagcac ctgtctctaa gttctagcaa
     6721 gctagcaccc tcatatctct ataaggttct taggatatca agcccaggta aggttcttcg
     6781 cgtatcttcg aattaaacca catgctccac cgcttgtgcg ggtccccgtc tattcctttg
     6841 agttttaatc ttgcgaccgt actccccagg cggtacactt aatgcgttag ctgcattact
     6901 gagatgacta gcaccccaac aactagtgta catcgtttag ggcgtggact accagggtat
     6961 ctaatcctgt ttgctcccca cgctttcgcg ccttagcgtc agttgagttc cagcagatcg
     7021 ccttcgcaat gggtattctt ggtgatatct acggatttta cccctacacc accaattcca
     7081 tctgcctctc cctcactcta gactatcagt ttcccaagca gtttaatggt taagccatta
     7141 gatttcacaa gagacttgat aatccgccta cgcgcccttt acgcccagtg attccgagta
     7201 acgcttgcac cctccgtatt accgcggctg ctggcacgga gttagccggt gcttattcct
     7261 taggtaccgt cagaattctt ccctaagaaa aggagtttac gctccgaaaa gtgtcatcct
     7321 ccacgcggcg ttgctgcgtc agggtttccc ccattgcgca atattcccta ctgctgcctc
     7381 ccgtaggagt ctggaccgtg tctcagttcc agtgtgactg atcatcctct cagaccagtt
     7441 aagcgtcata gccttggtga gccattacct caccaactag ctgatactat atagtctcat
     7501 cctacaccga aaaactttcc ctactcaact tatgttaagc aggagtatag agtattagca
     7561 gtcgtttcca actgttgtcc tcttgtgtag ggcagattaa ctatacctta ctcacccgtg
     7621 cgccactaat ccacttctag caagctaaaa gcttcatcgt tcgacttgca tgtattaggc
     7681 acgccgccag cgttcactct gagccaggat caaactctcc ataaaaatta cagatagttt
     7741 aatctttttc ttcaaagaaa aagtatgaaa gattaatcaa agaaaagtct ttaatctttc
     7801 attataattt agattgatag attttacata attgcttatg cctaaatctt tctggctcaa
     7861 tcgatcactt atttagattt caaagattga ctaataagat ttgaataaca atactaaatt
     7921 aaaagaacaa aacaaaaaat catttttaaa agaaaagttt aaattaaaaa acaagattta
     7981 taaaaaagct ttcagtttat aaataaaaaa ctgaaaaagt taatttataa aatctactaa
     8041 gctagtgaaa ctttataatt taaaagattt taagtccttt tttcaaaaaa ggaagtaaaa
     8101 gtataactaa ttaaacttaa agagggatta aataaggcta atatttagcc ttattgttta
     8161 taataaaatg gggattagaa ttagttcaaa tctacaggac cattactagc atgagattgc
     8221 aaaaagcgta aaattctagc tttttcttca tctgtaatct ttgcaaatcc ttgcatagca
     8281 gataaataag catcccattc ttccatcaag tgctcttttg gcttatgtgc cgcatgacaa
     8341 gaagtacaag tatcataata agctaactca acctcatccc aagcttcaat ttctttttca
     8401 gttaaatctt tattttttac ccaaaattcc ataactggag aaacattttg atttttaagt
     8461 tttacaagca cataaattcc attttgacta aaagccaaag tttttggatc attttctaca
     8521 actgagccgc ttacttttat caagctcata tcgccttctt ttttcaatac ttcgactttt
     8581 gttccttcat aaatttcacc tacagctttc ttagactttg catctaaaac ttctactttt
     8641 tcattaaaaa tataagcatt ttgtgcgaaa gaaattccgc acaaacaagc caataaaact
     8701 aaaattcttt tcatttttaa gctcctataa tttctggtgg tgttgtagat ttataaggtt
     8761 ttactgcatc tttaactttg cgaatagcca ccaaacaagt gtttacactt gtagcttgtg
     8821 ccatagttga agttggtctt gaacttgtta aaacatttac atgacctgca ttacatcttg
     8881 gcttgctatc atttatatct tcaggatcat accaagcgcc ttcttgtatg ctaaccactc
     8941 ctggcataat tttatctgta acaaaagcac ctgctaataa acttccacgc tcgttataaa
     9001 cttctactac ttcaccatga ttaataccta gttttttagc atcttcatta ttgataacca
     9061 ctggctcacg accttgaatt ttgtaaagat ctcttaccca agtattgtca agttgagaat
     9121 gtattctata
//
LOCUS       DAPWAA010000059         9088 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.059, whole genome shotgun sequence.
ACCESSION   DAPWAA010000059 DAPWAA010000000
VERSION     DAPWAA010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9088
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.059"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(1241..2644)
                     /locus_tag="RTF91_001388"
                     /pseudo
     CDS             complement(1241..2644)
                     /locus_tag="RTF91_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049860.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2803..3711)
                     /gene="tssG"
                     /locus_tag="RTF91_001389"
     CDS             complement(2803..3711)
                     /gene="tssG"
                     /locus_tag="RTF91_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssG"
                     /protein_id="HDZ4944256.1"
                     /translation="MNDLTSYSFFKLIKKLEKDYGRKNIFLRTNKSLKHPNKDIEKII
                     FLEHKQSIIELFINFMGLHGASSQLPSFMLDKLSRNEDGEQGWTLFFDFFNHYLLWIF
                     FDVVNLKNYPRSFNENFKDSISQILFNILGIKECDIAKNYLPFAPLLLSLRRPKTHIE
                     RVLQVNFKLKDKLLIIENLSHQILISDSQKNKLGIKNHTLGNNFILGDKFISYQNKIA
                     IYIKDISYQEALKYMPNGSKHNDLKNSIMFLTNNEFCVDLYLKINYSSEMKFVLGDEN
                     TAKLGWAKILGNTQKKYTIVYMKLCE"
     gene            complement(3708..5429)
                     /gene="tssF"
                     /locus_tag="RTF91_001390"
     CDS             complement(3708..5429)
                     /gene="tssF"
                     /locus_tag="RTF91_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssF"
                     /protein_id="HDZ4944257.1"
                     /translation="MKDNIFYYQKELEYLYETREHFIKNYPKLTPFLAYDSKDPDIER
                     IIENLAILSSKIHQELDENIPHIAESLINIISPNYTNPLPSLCMQEFKFEQNSKENNL
                     IIPKGTLIKSKPIDKCVCEFKTVYDVYLYPISINEVFISSKNQDYTFNLTLQINKTET
                     KICDLGLEKINLYLGNDTYMSSTLLLYMHSYLKELKIQCLDTDEEFFLNTYNIEKIGF
                     NPDESSLSYNDLGFEAFSLLREYFFMPHKFNFLRINGLDILNNCQGKTINIEFKFSKP
                     FPANCIFRKELLSLGMTPIINIFTKSAEPLINNHKKDGYRIFIDRSQPKAYEIIQTLQ
                     VKAHNSEGGKRLLKNYKSFERFEFLKDNQKDFYSINTKKNSKGEIFSEISFFSSCLIN
                     ETISIDLLCSNGDLPSKLKIGDINTCNLKGVDTKNIEIPSETRRCSVDGNLLWKLVSV
                     LSFSYQTILSKKAFFGVLESYSFLDNQSNWKIYKLLQESIIDIESKSTYLIDENITKK
                     GTVAIFSIKDSKFYTLGEVYLLGLIISKFLASFASINSFCELKIKCLDSKEILHYPAS
                     FGKKALI"
     gene            complement(5426..5818)
                     /locus_tag="RTF91_001391"
     CDS             complement(5426..5818)
                     /locus_tag="RTF91_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDZ4944258.1"
                     /translation="MSLLDKLIHNLDEQNIHIPFYQNDFEDVKNNIKVLLNAKINDCY
                     AVKNLGMPNMADINLNSNELCVSMAKEIRKLIDNYEKRICVVSITYDNSLSPWQLSFI
                     TKCFFQDDRFKEFSIEIIFKNNRYCEVK"
     gene            complement(5822..7276)
                     /gene="tssC"
                     /locus_tag="RTF91_001392"
     CDS             complement(5822..7276)
                     /gene="tssC"
                     /locus_tag="RTF91_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     large subunit"
                     /protein_id="HDZ4944259.1"
                     /translation="MANTKTVDTPIIEQIMEKSKYSKNDESYSIAKRGVAEFISEIVK
                     SDNAEEKINKFALDEMIAHIDHLLSRQMDEVLHNEEFQKLESTWRGLRFLVERTDFNE
                     NIKIDLFDITKEEALEDFENNPDITQSVVYKNIYSSEYGQFGGEPVGAIIGDYQLGSA
                     SPDMTFLNKMASIAAMSHSPFLTSFGPKFFGFDDYSELANIQDLQGLLEGPQYTRWRT
                     FRENEDSKYTGLLVTRFLARSPYDPEENPIKSFNYKENVHASHNHLLWANSSYTFCTR
                     LTESFAKYRWCGNIIGPKSGGSVKDLPTYLYENFGTMQSKIPTEVLITDRREYELSEA
                     GFITLTLRRDSNNAAFFSANSPLKPKIFQNTPEGKEAETNYRLGTQLPYIFLISRLAH
                     YLKVLQREEIGSWKEKSDIENGLNEWIRQYISDQENPPSEVRSRRPFRAAQVKVDDIP
                     GEPGWYKIGLSVRPHFKYMGGNFELSLVGKLDKE"
     gene            complement(7278..7763)
                     /gene="tssB"
                     /locus_tag="RTF91_001393"
     CDS             complement(7278..7763)
                     /gene="tssB"
                     /locus_tag="RTF91_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     small subunit"
                     /protein_id="HDZ4944260.1"
                     /translation="MSDGSHAPKERINITYKAKTNGQNEDIELPLKLMVMANLKGKNE
                     TPLEEREILQINKINFDQVMRKLNITTSFSVKNTLGTGAEELDVKLNIASMKDFSPDN
                     LARQIPELNKLLQLREALMALKGPMGNIPDFRKAVLEALKNEKTKEKLLLEIKQEEQG
                     N"
     gene            complement(7833..9080)
                     /locus_tag="RTF91_001394"
     CDS             complement(7833..9080)
                     /locus_tag="RTF91_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system domain-containing
                     protein"
                     /protein_id="HDZ4944261.1"
                     /translation="MSFCNQSKNNLDELQEFQLLEDEMSKYKTLNHENISWDKVYQYS
                     QFILLHHSLEFKVCNYFLLSCFNLNNEECFKKLLLLFQHLKKLMDENNAYILTQKRKI
                     EIFIQNFIQEYNKTKMLVSSKIINQFIVLFSEFENLLSCNFAKIEIAQTTTQLPKSPV
                     TQVSVNIKSDNINSLNEREYKNFYQKLAFELLEEDENNLNIYALFTQAMWGKIKCLPE
                     CNNEKITKIRKPDTDIIRILLSDKENDTEHIKCFMHELILNPFWIEGVQLFCDFLEKK
                     KKNKQLDILIILTSDFISKFDAIELLRFQNGDFICKEEVYKYFIKPKEHKKSFFSSKK
                     IDKEQTLQDFEQMLMNIDKENFNNSIMNNINSLLNMVKIFESKGMKKNSKILNIYLVE
                     LMEKTLLKDYLVEEYESAKNKIE"
BASE COUNT         2924 a         1265 c         1214 g         3685 t
ORIGIN      
        1 ttataaattt agttttgatt taagaaaatt gcttttaatc tgctcttaaa tcacctcctt
       61 ttactcttaa acctttatca tctataatca cttgtatttt tcctacttgt aatataatct
      121 tatcttttat ttgtgtgata gttgtgtttc ccaccctaga aacaatctgt ttttgtgctg
      181 ttaaaatact ttctttattt gctaaagtat ttatcttatc agctgtaaaa gtgcaatcat
      241 tgttagcttt aaaactaata gaatcatcag cttcggcttt aaggtattca tttgtttcta
      301 tgcttagatc ttgtttagag taaaatttta cactttgctt ggttttaagc acataagaac
      361 cttttatggt ttcatttttg ttgtgtgcta ttctttggat aaaatcattt ttgatatctt
      421 gctctagatt gttatttatg atcactcttt tatcatttcc tattttttct tcgtgatttt
      481 gtccgatatt tacttcattg ctaattccta catttaaagt attatttaaa cccacattag
      541 tatctttaga aagcaaggta ttttctaaat attcagctcc tacattgaca tttttaaaac
      601 ctatgatatt ttgcatatgt cctaaagtga taaattcggt gtataaagct cctacttctg
      661 aagttttatt gttttttatg gtttgttcat aattgttgcc tatttcttct ttataatctt
      721 tttgtgctag gatataaatt tcttctttat ctttatcatt ttttaaggtg atttcattcc
      781 ttgcccttgc atcggtatta tccactccta ttgtggaatt agccaaagta agataatgat
      841 tatttataga gcttaattca tagtcagtgt tttcttgaag ttttaatgta tctaaacctt
      901 tgtcgatcat cataggagtt gcacttaaat aactcaatgc gcttgtggca atttctcttt
      961 tatatcttgg ataattatat tgaggcattg ttgtgactcc attatacaaa cttccactca
     1021 cataaggttt atctatatca tcatctaaaa aagagataat tacttcatct ccaattcttg
     1081 gagtatgaaa aaagcctgaa tgattgctcg caatgcttgt tgctactctt aaaaaaggag
     1141 tgtgatggta actaaatgaa gggttatttg tatcatccgt gatagaagta ttatctagtt
     1201 cttcttgatt ggcataaaga ttaatcctta cttttactct tccatactca tcagtataaa
     1261 tagtatttct ctcactttct atatccttgc tttctcctat aataattcct tgggtactat
     1321 gaggggcttt aggtttagct ttaaaacttg gagtaaagat aatattcttt tttaacaagg
     1381 tcaaagtatt agaataagac ttgccaagct ttaaatcttt taaatctaaa tgatcattag
     1441 tattaataga attagctaag attgcatcat caattaaaat ttgagtatta gcaatgataa
     1501 taaaatcttt aagcaaagag ttgtcgtctt gtttttgact ttttgtatga tcggcttgat
     1561 taagatcaaa ctcatcataa tttaaagtga taaaatctcc taagctaaga tgataaatat
     1621 tgctttttgc tagcaagctt tcatttaata ccaaggctct tttttcttta agggtagctt
     1681 tagtctttaa atcaatactt tgagtaaaag aatactcact ctcataaaaa tgttcattat
     1741 aataagcctt attattaagt tcttgttcat aagcaacctt attagaatgc aaagataaaa
     1801 gatttaaagg agtattagca tggatgctag aatgtgtaaa agaattggtt cttaaacttt
     1861 gttctttata gatagaagaa atacaagttt gatttaaagt attattgata ttagcattat
     1921 atttgatttc tttggttttt gtgtttttat atacatcaca aaaataaata gtgttttcat
     1981 cttcataaaa aaagattccg ttattgtgag ctaatctcat gataaagtct aaatcacttt
     2041 cattatactg agaaataagt tcttgttctt cataattaaa atgtatattg gaataatcta
     2101 tttctttata taatatatcc tgataaaaat gaagagtttg tttgatagtt tctatgatat
     2161 tagtatgagt ataaattcta tttgctttat ttaaagaaag tcttattaaa accgattcaa
     2221 gtttaaaaga aaaaaagtgc ttgtatttta attgttgagt gtttgaagag ctatcattga
     2281 tatttaaagt actttcttta ttaatgccta gatattttat gtaagtgagg attcctttat
     2341 agttttttac ttcattatta tcaaagctta aggtattgtt ttcataagga ttatggatgc
     2401 ttaaaatggc ttctttatcg attaaaacat taggatggag attaaactta gaagaacttg
     2461 aattttgaga atgatttaaa gaaaataaat cttgttctaa gctttcaaaa aaaccttcac
     2521 attctataga aaaaagttct tcaagacttt ctttgataat agctttagtg attttaaagg
     2581 gtgggggatt taaagcagaa ttagaattta aaatatcaag actcatgtaa gaagtgagag
     2641 acattgacga tccttttgcg tttataatgg tttatagttt aaatttaatc aattaaactt
     2701 attttagcat aaggtgggta aaataaagtt tattttatga tgtggatttt agagtaattg
     2761 tgattttttg aaacaaaact ttaaatatat ttttgtattg agttattcgc atagtttcat
     2821 atatactatt gtatattttt tttgcgtatt gcctaaaatt ttcgcccaac caagtttggc
     2881 ggtattttca tctcctaaca caaacttcat ttctgaagaa tagttgattt taagatataa
     2941 atcgacacaa aattcattat ttgttaaaaa cattatacta ttttttaaat cattgtgttt
     3001 agaaccattt ggcatatatt taagtgcttc ttgatatgaa atatctttta tatagattgc
     3061 tattttgttt tgataagaaa taaatttatc acctaatata aaattgtttc ctagggtatg
     3121 attttttatt cctaatttat ttttttgaga gtctgaaatt aaaatttgat gtgataaatt
     3181 ttcaataatt aataatttat ctttaagttt aaaattgact tgtaaaactc tttcaatgtg
     3241 tgttttgggc cgtcttagac ttagcagtaa aggtgcaaat ggtaaataat tttttgcaat
     3301 atcgcactct ttaattccta atatattgaa taaaatttgc gagatagaat ctttgaaatt
     3361 ttcattaaaa gaccgcggat aattttttaa atttactaca tcaaaaaata tccaaagtaa
     3421 gtaatgatta aaaaaatcaa aaaataaagt ccaaccttgc tccccatctt catttcttga
     3481 taatttatcc agcataaatg aaggaagttg tgaggaggct ccatgtaacc ccatgaaatt
     3541 tataaataat tctataattg attgcttgtg ttctaagaaa atgatttttt ctatatcttt
     3601 gtttggatgc tttagacttt tatttgttct taaaaatata ttctttcttc cataatcttt
     3661 ttctagtttt tttatcagct taaaaaaact atacgaagta agatcattca tatcaaagct
     3721 ttttttccaa aggaagcagg ataatgtaaa atttcttttg agtcaaggca ttttatcttt
     3781 aattcacaaa aggagttaat gctagcaaaa gatgctaaaa atttggatat aatcaatcct
     3841 aataaatata cctcacctaa ggtataaaac ttagaatctt taatgctaaa aatggctaca
     3901 gttccttttt ttgtaatatt ttcgtctatt aaataagtgc ttttactttc aatatcaatt
     3961 atagattctt gtaaaagttt ataaatcttc cagtttgatt gattatccaa aaagctataa
     4021 ctttctaata caccgaaaaa agcttttttg ctcaatattg tttgatatga aaaagataac
     4081 acggaaacaa gcttccacaa taagttccca tcaacactac atcttcttgt ttcacttgga
     4141 atttctatat ttttggtatc gacacctttt aggttgcaag tattgatatc gcctattttt
     4201 aattttgaag gcaaatctcc attggagcat aaaagatcaa tgcttatagt ttcattgatt
     4261 aagcaagagg aaaaaaagga aatttcgcta aatatttctc ctttagaatt ctttttagta
     4321 tttatgctat aaaaatcttt ttgattgtct tttaaaaact caaagcgttc gaaactttta
     4381 tagtttttta atagtctttt accgccttcg ctattgtgag ccttaacttg taatgtttgt
     4441 atgatttcat aagctttagg ttgacttcta tcaataaaaa ttctataacc atctttttta
     4501 tgattattta taagaggttc tgcgcttttt gtaaagatat tgataatagg tgtcatacct
     4561 aaagaaagta attcttttct aaagatacaa tttgccggaa atggtttaga gaatttaaat
     4621 tcaatgttaa ttgtttttcc ctgacaattg tttagaatat ctaaaccatt aattcttaga
     4681 aaattaaatt tatgcggcat aaaaaaatat tctcttaata aagaaaaagc ttcaaaacct
     4741 aaatcattat aagataaact actttcatct ggattaaatc ctattttttc aatattgtaa
     4801 gtattaagaa aaaattcctc atcagtgtct agacattgaa tttttaattc ttttaaataa
     4861 gagtgcatat ataataataa agtgctagac atataagtat cattgcctag gtatagattg
     4921 attttttcta gacctagatc gcatattttt gtttctgttt tattgatctg caatgttaaa
     4981 ttgaaagtat aatcttgatt tttactagat ataaaaactt cattgattga aatagggtaa
     5041 agataaacat cataaactgt tttaaattcg caaacacatt tatctatagg ctttgatttg
     5101 ataagggttc ctttaggaat gattaaatta ttttctttac tgttttgttc aaatttaaat
     5161 tcttgcatac ataaagaagg taaaggattt gtatagtttg gggaaatgat attgattaga
     5221 gattctgcga tatgcgggat attttcatca agctcttggt gaattttaga actaaggata
     5281 gctaaatttt caataattct ttctatgtca ggatctttac tatcgtatgc taaaaatggg
     5341 gttagttttg gataattttt tataaaatgt tctcttgttt catataaata ctcaagttct
     5401 ttttggtaat aaaaaatatt atccttcatt taacctcgca atacctattg tttttgaaga
     5461 tgatttctat actaaattct ttaaagcgat catcttgaaa aaagcatttt gtaataaaag
     5521 aaagttgcca aggacttaaa ctattatcgt aagtgataga aactacgcat attctttttt
     5581 cataattatc aatcagtttt cttatttctt tggccattga cacgcataat tcattggagt
     5641 tgagattgat atcagccata ttaggcattc ctaagttttt tacagcgtag caatcattaa
     5701 ttttagcatt gagcaaaacc tttatattgt tttttacatc ttcaaaatca ttttgataaa
     5761 atggaatatg aatgttttgc tcatctaagt tgtgaatcag tttatctaac aaggacatta
     5821 attattcttt atctaatttt cctactaaag aaagttcgaa attaccaccc atatatttaa
     5881 aatgaggtcg gacgcttagt cctattttat accatcctgg ctctcctggt atatcatcga
     5941 ctttaacttg tgctgctcta aagggacggc gacttcttac ttcagaaggt ggattttctt
     6001 gatcagaaat gtattgtcta atccattcat taagtccatt ttctatatca cttttttctt
     6061 tccaacttcc tatttcttca cgttgtaaaa cttttaaata atgtgctaat cttgagatta
     6121 gaaagatata tggaagttga gttcctaatc tatagtttgt ttcagcttct ttgccttctg
     6181 gcgtattttg aaatattttt ggttttaatg gagaatttgc tgaaaaaaat gccgcattat
     6241 tactatctct tcttagcgtt aaagttataa aacctgcttc agaaagttca tactctcttc
     6301 tatctgtaat taaaacttct gtaggtattt ttgattgcat agttccaaaa ttttcataaa
     6361 gataagtagg tagatccttg acagatcctc cgctttttgg tcctataata tttccacacc
     6421 atctatactt agcaaagctt tctgttaatc ttgtgcaaaa agtgtatgaa gaattagccc
     6481 ataataaatg gttgtgtgaa gcatgaacat tttctttata attgaaactt ttaataggat
     6541 tttcttcagg gtcataagga cttcttgcta gaaatcttgt cactagtaag cctgtatatt
     6601 tagaatcttc attttctcta aaagttctcc atcttgtata ttgtggtcct tctaacaagc
     6661 cttgtaaatc ttgaatgttt gcaagttcag aataatcatc aaatccaaaa aactttggtc
     6721 caaaagatgt taaaaaagga gaatgactca tagctgcaat actggccatt ttatttaaaa
     6781 aagtcatatc aggacttgct gatccaagtt gataatctcc aatgattgcc cctacaggtt
     6841 ctcctccaaa ttgcccatat tctgaagaat atatattttt ataaacaaca ctttgtgtta
     6901 tatctggatt gttttcaaaa tcttctaaag cttcttcttt tgttatatca aatagatcaa
     6961 tttttatatt ttcattaaaa tcggttcttt caactagaaa tctaagtccg cgccaagtag
     7021 attcaagttt ttgaaattct tcattatgta aaacttcatc catttgtctt gagagtaaat
     7081 ggtcaatatg ggctatcatt tcatcaagtg caaatttatt gattttttct tcagcattat
     7141 cgctttttac aatctctgaa ataaattcag caacacctct tttagcaata ctgtaacttt
     7201 catcattttt agagtatttg cttttctcca taatttgctc aataattggc gtatcaactg
     7261 ttttggtatt tgccatctta atttccttgc tcttcttgct taatttctaa aagtaatttt
     7321 tctttagttt tttcattttt taacgcttct aaaacagctt ttctaaaatc cggaatatta
     7381 cccataggtc cttttaatgc cattaatgct tctcttaatt gcaataattt gtttagttca
     7441 ggtatttgtc tggctaagtt atccggagaa aaatccttca tgctagcaat attgagctta
     7501 acatcaagct cttcagctcc cgttccaaga gtatttttta cactaaaact cgttgttata
     7561 ttgagttttc tcatcacttg atcaaaatta atcttattaa tttgtaaaat ttctctttct
     7621 tctaaaggag tttcgttttt tccttttaaa tttgccatta ccattaattt taacggcagc
     7681 tctatatcct cattttgtcc attagttttg gccttgtatg taatattaat tcgttctttt
     7741 ggagcgtgag atccatctga cattttaaat ccttaaaaat aaaaattttt aacctaatta
     7801 ttatattaaa atttgctaaa tttaatcttg catcattcaa ttttattttt tgcactttcg
     7861 tattcttcga ctagataatc ttttaataga gttttttcca ttaattctac taaatatata
     7921 tttaaaattt tcgaattctt tttcattcct tttgattcaa aaatttttac catatttagc
     7981 aaggagttaa tattattcat aatagaatta ttaaaatttt ctttatcaat attcattagc
     8041 atttgctcaa aatcttgtaa tgtttgttct ttatcgattt ttttacttga aaaaaaactt
     8101 tttttatgtt cttttggctt gataaaatat ttataaactt cttctttgca aataaaatca
     8161 ccgttttgaa aacggagaag ttcaatggca tcaaatttag aaataaaatc acttgttaat
     8221 attataagaa tatccaattg tttatttttt ttctttttct ctaaaaaatc acaaaagagt
     8281 tgtacaccct ctatccaaaa agggtttaaa ataagttcgt gcataaaaca tttaatatgt
     8341 tctgtatcat tttctttatc agaaagcaat atacggatta tatctgtatc aggttttctt
     8401 attttagtaa ttttttcatt attgcattcg ggcaaacact tgatttttcc ccacattgct
     8461 tgggtaaata aagcatagat attaagatta ttttcatcct cttccaaaag ctcaaatgca
     8521 agtttttggt aaaaattttt atattctctt tcatttaaag agttaatatt atcactttta
     8581 atgtttacag acacttgagt tacgggagat tttggaagtt gtgttgtggt ttgagcaatt
     8641 tcgatttttg caaaattaca agataataaa ttttcaaatt cggaaaataa aacaataaat
     8701 tgattaataa tctttgatga tacaagcatt tttgttttat tatactcttg aataaaattt
     8761 tgaataaaaa tttcaatttt ccgtttttga gttagtatgt aagcattatt ttcatccatg
     8821 agttttttta aatgttgaaa aagaagtaaa agctttttaa agcattcttc attatttaaa
     8881 ttaaaacatg ataaaagaaa atagttacag actttaaatt ccaaagaatg gtgcaataat
     8941 ataaattgag aatattgata aactttgtcc caagaaatat tttcatggtt taaagtctta
     9001 tattttgaca tttcatcttc aagtaattgg aattcctgta gttcatctag attatttttt
     9061 gattgattac aaaaagacat ttaattcc
//
LOCUS       DAPWAA010000060         9019 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.060, whole genome shotgun sequence.
ACCESSION   DAPWAA010000060 DAPWAA010000000
VERSION     DAPWAA010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9019)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9019)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9019
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.060"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(176..484)
                     /locus_tag="RTF91_001395"
     CDS             complement(176..484)
                     /locus_tag="RTF91_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HDZ4944262.1"
                     /translation="MSNISKESSNKRQKIIRKTLEAADGLSLGISMVVAVFIGVAIGY
                     LLKKFTPYPWLFWLGVFWGISAAILNVYKAYKIQVKSYEEFRERDELIKEKIQKEKNK
                     "
     gene            complement(481..1755)
                     /gene="hemL"
                     /locus_tag="RTF91_001396"
     CDS             complement(481..1755)
                     /gene="hemL"
                     /locus_tag="RTF91_001396"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDZ4944263.1"
                     /translation="MTNKKAFKEACKFIAGGVNSPVRAFANVQSEPKFISHGKGAYIF
                     DIDGNSYIDYVQSWGPLLFGHCDKDIQKACQKALKKGSSFGAPTLLETELAKLVLSDF
                     PHLEKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFN
                     SPSSLGVLEDVAKHTLVAQYNDINSVKELFEKNKDIACVIIEPIAGNMGLVPAKQDFL
                     EELAKICKDNQTLLIFDEVMSGYRASYLGSYGINHIQADIITFGKVIGGGIPAAAFAS
                     RAEIMNILSPLGGVYQAGTLSGNPLAMAAGIASLTKAKKKVNLYKKLGKLAKKLTLEM
                     KKLADEKGLPLQTCHVGSMFGYFFTKDPVLHYQDALKSDLALFSKFHKNMLENGIYLA
                     PSQFETGFICSKMNDKIIDTTLEVVWESFKRI"
     gene            complement(1752..2099)
                     /locus_tag="RTF91_001397"
     CDS             complement(1752..2099)
                     /locus_tag="RTF91_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944264.1"
                     /translation="MKIVLMFFLFNISLFSADFITLKEYSKMLYENPRGISCKECHGA
                     DGSEQILGYYMKNGIKTAYKVPSIQNLSFENFKNSLNQSKDAKSIMPNYSLTNDEIVT
                     LYNYIKQFSKEEK"
     gene            2179..3027
                     /gene="folD"
                     /locus_tag="RTF91_001398"
     CDS             2179..3027
                     /gene="folD"
                     /locus_tag="RTF91_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDZ4944265.1"
                     /translation="MTLLDGKALSAKIKEELKEKNQFLKSKGIESCLAVILVGDNVAS
                     QTYVKSKAKACEECGVKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPAHI
                     CKDLVLESIISSKDVDGFHPVNVGYLNLGLESGFLPCTPLGIMKLLKAYEIDLEGKDA
                     VIIGASNIVGRPMATMLLNARATVSICHIKTKDLNLYTKQADLIIVAAGCVNLLRSDM
                     VKEGVVVVDVGINRLKNGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKS
                     AKNRLN"
     gene            3037..3885
                     /gene="lepB"
                     /locus_tag="RTF91_001399"
     CDS             3037..3885
                     /gene="lepB"
                     /locus_tag="RTF91_001399"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDZ4944266.1"
                     /translation="MEFLKKLYKFSQSWTGTVVIVLLVIFFFIQAFVIPSGSMKNTLL
                     VGDFLFVKKFSYGIPTPHIPWLEIPVLPDFNKDGHLIKAQGPQRGDIVVFRNPRNEKE
                     HFVKRCVGAGGDRIVYANKTLYVRMNEGDDFMREHYPNDLVTLGGQIYVKEPYKQKGI
                     HYDPKKDIENDILRFLSIGDFAMSPTYIRELGNHIGFSGGNAYVFDVPENEYFMMGDN
                     RDYSYDSRFWGSVPYRLIVGQPWFVYFSWDKDKNVRWERIGRFVDTLENDEQYIHDHD
                     DEDKLS"
     gene            complement(3908..5065)
                     /locus_tag="RTF91_001400"
     CDS             complement(3908..5065)
                     /locus_tag="RTF91_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDZ4944267.1"
                     /translation="MKNIFETLKDLEKQISCLNESELISLEEAKDRFLAKDLYATKNL
                     PSFDNAALDGYAFNYTDINEALEIKGTIFTGDKNSHTIGKNECYKIMTGAKMPKNADT
                     ILMLEDECIENNKLIIKKLPKRYNAYRYKGEELNKGAPLLEKGTKLNDKHIALLASQG
                     LYKIEVIRKIRIGIFSSGNELKEPWQECDEESIYNANALPLLTMLENASYLGILQDDF
                     INTKKALKNAKFDLLITSGGASVGEADFMEKSLDELGFNAIFKGVKARPARPTKLYQK
                     EKLVLILPGNPMAAYLSCFIFAKKIIALLSGNLENPLQFYAKMGIDLKLKNGRNNLIL
                     GNLEKDIFTPFNENKFGSGMILPLIKSEFLLISEENTSELKKGDEITLLKI"
     gene            complement(5062..6318)
                     /gene="murA"
                     /locus_tag="RTF91_001401"
     CDS             complement(5062..6318)
                     /gene="murA"
                     /locus_tag="RTF91_001401"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDZ4944268.1"
                     /translation="MTYLEIEGINHLSGNVTISGAKNAALPLIVSSILAKNEVKINNI
                     PNVADIKTLISLLENLGAKVNFQNNTALLNTSTLNQTIAKYDIVRKMRASILTLGPLL
                     ARFGHCEVSLPGGCAIGQRPIDLHLLALEKMGANIQIKQGYVVASGNLKGNEILFDKI
                     TVTGSENIIMAAALAKGKTKLLNVAKEPEVVQLCEILKDAGLDIKGIGTDELEIYGTD
                     KELLEIKEFSVIPDRIEAGTYLCAGAITNSKITLDKVNASHLSAVLAKLHQMGFETLI
                     KEDSITLLPAKEIKPIEIMTSEYPGFPTDMQAQFMALALKTNGTSIIDERLFENRFMH
                     VSELLRMGADIKLNGHIATIVGGKELNAADVMATDLRASSALILAALAAKGTSKVHRI
                     YHLDRGYENLEEKFKSLGVKITRLEE"
     gene            complement(6498..8912)
                     /locus_tag="RTF91_001402"
     CDS             complement(6498..8912)
                     /locus_tag="RTF91_001402"
                     /inference="COORDINATES: protein motif:HMM:NF015737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDZ4944269.1"
                     /translation="MPTGGGLYAAEVNDDTKLNADKNNPNRYTYEFNTGDKVKTELGK
                     TKLTDENKIKHLTIKAGANQSGELKFIGDSAQKASLGDGYSFDLTADKLTFTGIANQE
                     AASIIATNGASTINAKNGVELSNANIDVANGAYFNRNLNGSLAINGDLKLTSSSVANF
                     GNANFNVNGKVTASNTEFEAVVLDLSRVTSDGFYIMSASGGFVNGSDATKSFTDASSG
                     NKGLLNLRNPLVNISSNLVDRNYAGGVGTIANFDIIAPSTDLSNLYRVELVQKGNSLY
                     VSGGFSAMRDNNRVDFDTLNTAIKTEFTTQKNSLETLYKVENKVESGIFKDNRDVVKT
                     EIDKYNTEKTGTIATSQQAVDNAKTKLDKANQGGKQDEIKTAQAIYDAAVKQLENDKK
                     TLSELNNRLAEYNKLIEQVKNKTANLNAKINNPNFDIRAGQKGRIFASLAESNVGGKL
                     AGTADYIFANGKVINDIERAAQSNARNSALNGPIGAINMSNDMSISNRLAKFSNPYST
                     MNVASLEGAKFATGNGIASDSQYAYGARSYDNNVWADVIGGANIIDSKSGALYGVSVG
                     YDRLVGEDTILGVYLTYANSEIKTNTAKQESDNLQLGLYSRTLYGNSEFDFKGYAQFG
                     WTDQDRFIAGTTNSSDFTRKFLGASGTYGYVFDMGNDFYIKPLAGLNLYYSFTPDYNE
                     NGAFAQHVQSQSSFDTSIEAGAEFRKYLSKESYIYATPKIEQYVITSGDDYTARFLGS
                     PTSFTINGSDKKKTYGSFIVGGDVNIKNQWAFTFSAGVKHLLGGKVNDESETYLSGNI
                     GLKYQF"
BASE COUNT         2859 a         1497 c         1397 g         3266 t
ORIGIN      
        1 atgatgactt ttttataatt taaataagaa gtaaaaacga tcaataaaac actgaaaaaa
       61 gctatttcat agcttaaaaa tgcatttagt tgaaaatgat ttaatggtaa aaatataacc
      121 caaaaaaata aatgaataat ggcgaaaata taaaataaag cttttttata ttccattatt
      181 tgttcttttc tttttgaatt ttttctttga ttaattcatc tctttctcta aattcttcgt
      241 agctttttac ttgaatttta taagctttat aaacattaag tatagcagca ctaattcccc
      301 aaaaaacccc aagccagaaa agccaaggat agggggtaaa ttttttaagc aaatatccta
      361 ttgccacgcc tataaataca gcaactacca tagaaatgcc aagacttaaa ccatctgcag
      421 cttcaagagt tttgcgaatg attttttgtc ttttattgct agattctttt gaaatattac
      481 tcatattctt ttaaagcttt cccaaacaac ttctaaagtt gtatctataa ttttatcatt
      541 catttttgaa caaataaagc ctgtttcgaa ttgcgaaggc gctaaataaa ttccattttc
      601 aagcatattt ttgtgaaatt ttgagaataa tgctagatca gattttaatg catcttgata
      661 gtgtaacacc ggatctttgg taaaaaagta tccaaacata gaacctacat ggcaagtttg
      721 cagtggaagt cctttttcgt ctgctaattt tttcatttct agggtaagtt tttttgccaa
      781 ttttccaagt ttcttataaa gattgacttt ctttttagct tttgtaagac ttgctatacc
      841 tgcggccatt gccaaaggat taccacttaa agttcctgct tgatatacac cacctaaagg
      901 acttaaaata ttcataattt cagctctaga agcaaatgct gctgcaggta taccgcctcc
      961 tattacctta ccaaaagtga ttatatctgc ttgaatatga ttaattccat aagatccaag
     1021 ataagatgct ctatatccac tcatcacttc atcaaaaatc agcaaagttt gattgtcctt
     1081 gcagatttta gcaagttctt ctaaaaaatc ttgtttagca ggaactaaac ccatgtttcc
     1141 agcaataggt tcaatgataa cacaagcaat atctttgttt ttttcaaaaa gttcttttac
     1201 actatttata tcattgtatt gtgccactaa agtgtgctta gccacatctt ctaaaacccc
     1261 caaagaacta ggagaattaa aagtagcagc accacttcct gcgcttacta acaatgaatc
     1321 agaatgtcca tgatagcatc cttcaaattt taaaatctta tcttttttag taaaaccacg
     1381 agcaaggcga atagcactca tagttgcttc tgttccactg cttacaaagc ggattttttc
     1441 taaatgagga aaatcagata aaacaagttt ggcaagttca gtttctaata aagttggagc
     1501 accaaaactt gaaccttttt taagtgcttt ttgacaagct ttttgtatat ctttatcaca
     1561 atgtccaaaa agcaaaggcc cccaactttg aacatagtct atataagaat ttccgtctat
     1621 atcaaaaata taagcacctt ttccatgaga aataaatttt ggctcacttt gaacatttgc
     1681 aaaagcacga actggagaat ttacaccacc tgcgatgaat ttacacgctt ctttaaaagc
     1741 ttttttgttt gtcatttttc ttccttgcta aattgcttga tataattata taaagttaca
     1801 atttcatcat ttgttaaaga ataatttggc atgattgatt ttgcatcttt actctgatta
     1861 agagaatttt taaaattttc aaaactaaga ttttgtatac ttggaacttt ataagctgtt
     1921 ttaatgccat ttttcatata atatcctaaa atttgctcac ttccatctgc tccatgacat
     1981 tctttgcaac taatgcctct tggattttca taaagcattt tagaatattc tttaagggta
     2041 ataaaatcag cactaaaaag actgatattg aataaaaaaa acattaaaac aattttcaaa
     2101 gtttcacctt gttaatgaag ttttaatatg atacaatttt tactttaaaa aagcgattaa
     2161 atttatagaa ggaaaatgat gactttgctt gatggtaaag ctttaagtgc aaaaatcaaa
     2221 gaagaattaa aagaaaaaaa tcaattttta aaaagtaaag ggattgaaag ctgtttagct
     2281 gttatcttgg ttggagataa tgttgcaagt caaacttatg taaaatctaa agctaaagcc
     2341 tgtgaggaat gcggagttaa atctttagtc tatcatctta atgaaaacac tacacaaaat
     2401 gaacttttag cattgattaa taccttaaat cacgatgata gcgttcatgg aattttagtc
     2461 caacttcctt tacctgctca tatttgtaaa gatttagtgc ttgaaagcat tataagtagt
     2521 aaagatgtcg atggttttca tcctgttaat gtaggatatt taaatttagg tttagaaagt
     2581 ggatttttac cttgtactcc gcttggaatt atgaagcttt taaaggcata tgaaattgat
     2641 ttagaaggta aagacgctgt tattataggt gcttcaaata tagtaggccg tcctatggcg
     2701 acaatgcttt taaatgctag agctacagta agtatttgtc atattaaaac caaagattta
     2761 aatctttata ctaaacaagc tgatttaatt atagtggcag caggttgtgt aaatttactt
     2821 cgatcagata tggtaaaaga aggggtcgtt gttgttgatg ttggaattaa tcgccttaaa
     2881 aatggaaaga tagtagggga tgtagatttt gaagaggtat ctaaaaaatc tagctatatc
     2941 actcctgttc caggaggagt agggcctatg actatagcca tgcttttaga aaatacagtc
     3001 aaatccgcta aaaatcgact taattaggaa aaatctatgg aatttttaaa gaaattatat
     3061 aaattttcac agtcttggac tgggactgta gttattgttc ttttggtaat ttttttcttc
     3121 atacaagctt ttgtcattcc ttctggttct atgaaaaata ccttactggt aggagatttt
     3181 ttgtttgtta aaaaatttag ctatggtatt ccaacccctc atattccttg gttagaaatt
     3241 cctgttttac cagatttcaa caaagatgga cacttgataa aagcacaagg acctcaaaga
     3301 ggggacatag tagtttttag aaatcctaga aatgaaaaag aacactttgt aaagcgttgt
     3361 gtaggtgcag gaggggatag gatagtttat gcaaataaaa cgctttatgt aagaatgaat
     3421 gagggtgatg attttatgag agaacattac ccaaatgatc ttgtcactct tggggggcaa
     3481 atttatgtaa aagagccgta taagcaaaaa ggtatacatt atgatccaaa aaaagatata
     3541 gaaaatgata ttttacgctt tcttagcata ggcgattttg ctatgtctcc aacctatatt
     3601 agagaacttg gaaatcatat aggttttagt ggtggcaatg cttatgtttt tgatgtgcct
     3661 gaaaatgaat attttatgat gggtgataat cgtgattatt cttatgatag tcgtttctgg
     3721 ggttctgtgc cttatagatt gatagtaggt caaccttggt ttgtgtattt ttcttgggat
     3781 aaagataaaa atgttcgctg ggaaaggata gggcgttttg ttgatacttt agaaaatgat
     3841 gaacaatata tccatgatca tgatgatgag gataaattaa gttaatgttt gtgaaaaaac
     3901 acaagcatta tattttcaaa agcgtgattt catctccttt ttttaattcg cttgtgtttt
     3961 cttcactgat aagtaaaaac tcgcttttaa taagtggaag tatcattcca gaaccaaatt
     4021 tattttcatt aaatggtgtg aaaatatctt tttctaaatt tcctaagatg agattatttc
     4081 ttccattttt aagttttaaa tctatgccca ttttggcgta aaattgtaaa ggattttcta
     4141 aatttccact taataaagca ataatttttt tagcaaaaat aaaacaagaa agataagctg
     4201 ccataggatt tcctggtagg ataagcacta atttttcttt ttgataaagt ttagtgggtc
     4261 ttgcaggacg tgcttttact cctttgaaaa tagcattaaa accaagttca tctaaagatt
     4321 tttccataaa atcagcctcg ccaacacttg cacctcctga agtgatcaaa agatcaaatt
     4381 tcgcattttt taaagctttt tttgtattta taaagtcatc ttgaaggatg cctaaataag
     4441 aagcgttttc aagcatagtt aataaaggca aggcattagc attataaata ctttcttcat
     4501 cacattcttg ccaaggttct ttaagctcat ttccgcttga aaaaatgcct atgcgaattt
     4561 ttcttattac ttctatttta taaagtcctt gagaggcaag tagagcgata tgtttgtcgt
     4621 taagcttagt gcctttttcg agtaaaggtg ctcctttgtt taattcttct cctttgtaac
     4681 gataggcatt gtatcgttta ggaagttttt taatgataag cttattattt tctatacact
     4741 catcctcaag cattaaaata gtatctgcat ttttgggcat tttagcccct gtcatgattt
     4801 tgtagcattc atttttaccg attgtgtgac tatttttatc tcctgtaaaa atagtacctt
     4861 taatctctaa agcttcattt atatcagtat aattaaaagc ataaccatca agagcagcat
     4921 tatcaaaact tggtaaattt tttgtagcgt ataaatcctt agctaaaaat ctatcttttg
     4981 cctcttcaag gctgataagt tcgctttcat ttagacatga aatttgtttt tctaagtctt
     5041 ttaaggtttc aaagatattt ttcattcttc aagccttgtg attttcacgc ctaagctttt
     5101 aaatttttct tctaaatttt cataacctct atcaagatga taaattctat gcactttgct
     5161 tgtgccttta gctgcaagag cggctaagat aagtgctgaa gaagcacgca aatctgtagc
     5221 cataacatca gctgcattaa gttcttttcc acctactata gtggcaatat gtccgttaag
     5281 tttgatatct gcacccattc ttaaaagctc gcttacatgc ataaagcgat tttcaaatag
     5341 tctttcatca atgatacttg tcccattggt ctttaaagct agtgccataa attgtgcttg
     5401 catatcagtt ggaaagcctg gatattcgct tgtcatgatc tctataggtt tgatttcttt
     5461 agcaggaagt aaggtgatgc tatcttcttt gattaaagtt tcaaaaccca tttgatgaag
     5521 ttttgctaaa actgcactta aatgcgaagc attaacttta tctaaggtga ttttagaatt
     5581 tgtgatagct ccagcacaaa gataagttcc tgcttcaatt ctatcaggta taacactaaa
     5641 ttctttaatt tctaaaagtt ctttatcagt gccataaatt tcaagctcat ctgtacctat
     5701 acccttgata tcaagtcctg catcttttaa aatttcgcaa agttgaacta cttcaggctc
     5761 ttttgcaaca tttaaaagtt tagttttacc tttagctaaa gccgctgcca tgataatatt
     5821 ttcactacct gtaacagtga ttttatcaaa aagaatttca ttgcctttta aatttccact
     5881 agctacaaca tagccttgtt tgatttgtat atttgctccc attttttcta aggctaaaag
     5941 atgcaaatca ataggccttt gccctatcgc acatcctcca ggtaaagata cttcacaatg
     6001 tccaaaacga gcaagcaaag gtcctaaagt aagtatagaa gcacgcattt tacgcacaat
     6061 gtcatatttg gctatagttt gattaagagt gcttgtattt aataaagcag tattattttg
     6121 aaaatttacc ttagctccta aattttctag taaagatata agagttttta tatcagctac
     6181 attaggaata ttgtttattt ttacttcatt tttagcaagt atacttgaaa cgattaaagg
     6241 tagggcagca ttttttgccc cacttatcgt aacatttcca cttaggtgat ttataccttc
     6301 gatttctaaa taagtcatta caagtaacct tattttaatt tttaaaactt aattatacat
     6361 ttttaaactt tgtaaaagtt tattattttt ttggttttat aatccttgaa tgcatgttta
     6421 taagatattt ttctagtaat gttaatttgg agtgcaaagc cataaaaagg ctttgcaaag
     6481 gagaattctt ggataagtta gaattgatat ttaagaccga tgtttccgct taaataagtt
     6541 tcactttcat catttacttt accacctaaa agatgtttaa cacctgctga gaaagtaaaa
     6601 gcccattgat ttttaatatt aacatctcca cctactataa atgagccata agtttttttc
     6661 ttatcacttc cattgatagt aaatgaagtc gggcttccta aaaatctagc agtgtaatca
     6721 tctccggaag tgattacgta ttgctcaatt tttggtgtag catagatata gctttctttt
     6781 gaaaggtatt ttctaaattc agcacctgct tcaatgctag tatcaaaact agattgtgat
     6841 tgaacatgtt gagcaaatgc accattttca ttataatcag gtgtaaaaga ataataaaga
     6901 ttaagtcctg ctaaaggctt gatataaaaa tcatttccca tgtcaaatac gtaaccataa
     6961 gttccactag cacctaagaa ttttctagta aaatcagatg aatttgttgt tccagctata
     7021 aatctatcct gatcagtcca gccaaattgt gcgtaacctt taaagtcaaa ttcgctattg
     7081 ccataaagtg ttcttgagta taagccaagt tgtaagttat cgctttcttg ttttgctgtg
     7141 ttagttttaa tttctgaatt tgcataggtt aaataaactc ctaatatagt atcttctccc
     7201 actaaacgat cataacccac gcttacaccg tataaagcac cacttttact atcgataata
     7261 ttagcaccac cgattacatc tgcccataca ttattatcat aacttcttgc accataagcg
     7321 tattgagagt cgctagcaat tccatttcct gttgcaaatt ttgctccttc taaagaagct
     7381 acattcatgg ttgaataagg attgctaaat ttagccaaac gatttgatat agacatatca
     7441 tttgacatat tgatagcgcc aataggaccg tttagagctg aatttcttgc attagattgt
     7501 gctgctcttt ctatgtcgtt gattacttta ccattagcaa agatataatc agctgttcca
     7561 gctaattttc cacccacgtt agattcagct aaagaagcaa aaattcgtcc tttttgtccc
     7621 gctctgatat caaaattagg attattgatt ttagcattta gattagctgt tttgtttttg
     7681 acttgttcga tgagtttgtt gtattctgct aaacgattat taagttcgct tagagttttt
     7741 ttatcgtttt caagttgttt tacagctgca tcatagattg cttgagctgt tttgatttcg
     7801 tcttgtttac ctccttgatt ggctttatca agtttagttt ttgcattatc tacagcttgt
     7861 tgagatgtag cgatagtgcc agttttttct gtgttatatt tatcaatttc agtttttacc
     7921 acatctctgt tatctttaaa aattccgctt tctactttat tctcaacctt ataaagtgtc
     7981 tctaaactgt ttttttgtgt tgtaaattct gttttaatag ctgtgtttaa cgtatcaaaa
     8041 tcaactctat tattatctct catagcagaa aaacctccac tgacataaag actattgcct
     8101 ttttgaacga gttctactct ataaagattg cttagatcag ttgatggtgc aataatatca
     8161 aaattagcta tagtgcctac tccacctgca taatttctat ccacaagatt agaagagata
     8221 ttcactaatg gattgcgaag gtttaagagt cccttgttac cactgctagc atctgtaaag
     8281 cttttagtcg catctgaacc atttacaaaa cccccagaag cactcatgat ataaaaacca
     8341 tcgctagtta cacggcttag atctaatact acagcttcaa attctgtatt gctagcagtc
     8401 acttttccat tgacattaaa attagcgttt ccaaagtttg caacgctact actagtaagt
     8461 tttaaatctc cattgatagc taaagaacca ttaaggtttc tattaaagta tgctccatta
     8521 gctacatcta tatttgcatt gcttaattct acgccatttt tagcattgat agtgcttgca
     8581 ccattagtag caatgatact tgctgcctct tggttagcaa ttcctgtaaa agtcaattta
     8641 tctgctgtaa gatcaaaact atagccatca cctaaagaag ctttttgagc agaatctcct
     8701 atgaatttta attcaccgct ttgatttgct cctgctttaa tagtaagatg tttgatttta
     8761 ttttcgtctg taagtttggt tttaccaagt tcagttttta ctttatcacc tgtgttaaat
     8821 tcgtaagtgt aacgattagg attgttttta tctgcgttta gcttagtgtc atcattgact
     8881 tcagctgcat aaagcccccc ccccgtgggc aactataaaa cttgctgcga ttgcagaaag
     8941 catgatcgat ttatgatgtt tcataaataa actccttttt aaaatattaa aacaagcgta
     9001 tattaccata aaaactata
//
LOCUS       DAPWAA010000061         8899 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.061, whole genome shotgun sequence.
ACCESSION   DAPWAA010000061 DAPWAA010000000
VERSION     DAPWAA010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8899
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.061"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            78..806
                     /locus_tag="RTF91_001403"
     CDS             78..806
                     /locus_tag="RTF91_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDZ4944270.1"
                     /translation="MIELKNVNKYYGTHHVLKNINLSVQEGEKLVIIGPSGSGKSTTI
                     RCMNGLEEVSSGEVVVNNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPM
                     KLQKKSKKEAEETAFKYLKVVGLVDKANVYPATLSGGQQQRVAIARSLCTKKPYILFD
                     EPTSALDPETIQEVLDVMKEISYQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEEN
                     IPSKFFSNPKTERAGLFLGKILKN"
     gene            828..1607
                     /gene="peb1A"
                     /locus_tag="RTF91_001404"
     CDS             828..1607
                     /gene="peb1A"
                     /locus_tag="RTF91_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adhesin/ABC transporter
                     aspartate/glutamate-binding protein PEB1a"
                     /protein_id="HDZ4944271.1"
                     /translation="MVFKKSLLKLAVFALGACVAFSNANAAEGKLESIKAKGQLIVGV
                     KNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSI
                     DAVIATFTITPERKRIYNFSEPYYQDAVGLLVLKEKNYKSLADMKGANIGVAQAATTK
                     KAIGEAAKKIGVDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYIDDKSEILPDS
                     FDPQSYGIVTKKDDPAFAKYVDDFVKEHKNEIDALAKKWGL"
     gene            1609..2361
                     /locus_tag="RTF91_001405"
     CDS             1609..2361
                     /locus_tag="RTF91_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDZ4944272.1"
                     /translation="MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDTF
                     INGFVYTLEVSVLALLIATIFGTIGGVMATSRFKVIRAYTRIYVELFQNVPLVIQIFF
                     LFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYIQ
                     QMYYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAY
                     IFAAVLYFIICYPLAYFAKAYENKLKKAHLTR"
     gene            2371..3030
                     /locus_tag="RTF91_001406"
     CDS             2371..3030
                     /locus_tag="RTF91_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDZ4944273.1"
                     /translation="MENVFNAQNIEFLMQGLFLTLKIALATCIISIVFGTFLAITKNY
                     GDKLSKFLAACYIDIFRNTPLLLWMLAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMA
                     EIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAY
                     LAGLGIAELTYNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTAYV
                     S"
     gene            3135..4064
                     /locus_tag="RTF91_001407"
     CDS             3135..4064
                     /locus_tag="RTF91_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HDZ4944274.1"
                     /translation="MRGYKIFSGSANVEFARQVSKYLSLPLSDAGIKRFSDGEISVQI
                     DESVRGKDVFIIQSTCVPTNDNLMELLILTDALRRSSANSITAIIPYFGYARQDRKAN
                     PRVPITAKLVANLIQVAGIGRIATIDLHAGQIQGFFDIPVDNLYGSIVFNDYIKAKHF
                     KNAIIGSPDIGGVARARSVAKHLGLDIVIVDKRREKANESEVMNIIGDVKDKEVILVD
                     DIIDTAGTMVKAAEALKEKGAKSVMACCTHAVLSGKAYERVVSGALDELVVTDTIPLK
                     EQLSNIKVLSVAPVFAEVIRRVYHNESVNSLFI"
     gene            4232..6343
                     /locus_tag="RTF91_001408"
     CDS             4232..6343
                     /locus_tag="RTF91_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HDZ4944275.1"
                     /translation="MTQLSTKILWLFVAALGAVCFGYLALQNGESISAIYLIVAAVCI
                     YMIGYRFYGRFVAYKVLELDKNRATPALVENDGRDFVPTNKVVLFGHHFAAIAGAGPL
                     VGPILAAQMGYLPSMLWILVGGVLAGAVHDFVVLFISTRRKGRSLGEMIKDEMGKFTG
                     GVAMVAIFGIMLIIIAILAMVVVKALAESPWGLFTIAMTIPIAIFMGIYMRFIRPGRV
                     GEASIVGFVLLILAIHYGSVIAADPYWAKIFTLEAPTLAIVMMAYGFVASVLPVWFLL
                     APRDYLSTFLKIGVIVVMAVAIVLVAPDLQMPKANTQYFDGTGPVFAGGIFPFLFITI
                     ACGAISGFHALISSGTTPKMLENETHALAVGYGSMLAESAVAIMALICACILHPGLYF
                     AINSSSALIGTDVSSVAQTISSWGFSITPEEITALTTNIGEHTILSRTGGAPTFAIGV
                     ALILHELFGGVDLMAFWYHFAILFEALFILTAVDAGTRACRFMVQDILGNVYKPLGDI
                     HNYPAGLLATALSVAGWGYFLYQGAIDPKGGIYTLWPLFGVSNQMLAGMALLFATTIL
                     VKMGKAKYTWVTLVPAVFVLVTTLYGGIQKIMPYEEGNKVANAVSHVAAVSIQSQKIK
                     DLEVRLNDAKDEKEISMIKKEISIAAQNKVGNLVNAVLCVFFMIATLLVIISCIGICL
                     GKIKIPLKETKYIKIDEFQKI"
     gene            6324..6521
                     /gene="kcuS"
                     /locus_tag="RTF91_001409"
     CDS             6324..6521
                     /gene="kcuS"
                     /locus_tag="RTF91_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_148936501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KCU-star family selenoprotein"
                     /protein_id="HDZ4944276.1"
                     /translation="MNFKKFKYYYEKAERFFHPLVGLSSYDKYLEHMKQKHPGKIPKT
                     RGEFFKECLDKKYNSSGLNKC"
     gene            complement(6561..6974)
                     /locus_tag="RTF91_001410"
     CDS             complement(6561..6974)
                     /locus_tag="RTF91_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDZ4944277.1"
                     /translation="MRDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAAREL
                     SPERVVTISMDKVVFKEPVFIGDIISCYSKIVNVGNTSISVEVEVSAQRVDSQGCTSC
                     INVTSALVTYVSVTKDGKKKPISEELKRIHGFLNA"
     gene            7036..8880
                     /gene="ciaB"
                     /locus_tag="RTF91_001411"
     CDS             7036..8880
                     /gene="ciaB"
                     /locus_tag="RTF91_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein CiaB"
                     /protein_id="HDZ4944278.1"
                     /translation="MNNFKEIAKLVRRYKEKNNALYEFLDKEDLGEYFRSLVSLSELK
                     EDKTTMLAILRRLVDLKEENLIQEWKKNNLKEDKIIELKHKFYEEVRKFYEKEHQDLI
                     NEIKEKKLLNNFYQSLLQGVHNIGLIMDIFEISWTKEIIEKNNKILSMQFPNLDDAME
                     FLRKNHLYQKTPEGEICERSYGVLVRIGNLWKFVPYARFFENEILKLEYAFEDMIEQL
                     KIFANNEEEKAYIEYFEKLKLAFCEKDEDKVIKAWQEAEFAWMKVKSPLQVGHPLEYY
                     EDNYTHAVALEWDIRIEDESDFDVLKFSSDIKESFERVYKNIGLEDFELEKEVLSNIE
                     KTQLYICTPMIFYGAELKGLFSAQVVPNDEFVSSKAGKKIFAFINFVYENAKTKPFMK
                     ISSEVFDKEFLDYGRNILFYQEKIWKRVYEVSTIGHEFGHIFFVANDSEKIMNQSGFF
                     KNIEEYKATTGGLVNFFYHEQDDLIMPVFHELIKRAIGLISWQKVDEVKPYYTEGLIH
                     LSLLFESEVLIFENNILNINFDLEHYEKFKELTLKNYHDLAKHYALRLDAKEFLNRFC
                     EIEDNVFFPIMPKCKEFVKFYYDLYEKIGNEIDNSGEFERYRKNNEVF"
BASE COUNT         2977 a         1069 c         1688 g         3165 t
ORIGIN      
        1 tttgaagtag tttttttatt ttaatgataa aataaattta attaatttta tatttatgtt
       61 aaaataaagg aaaaaacttg attgaattaa aaaatgtaaa taaatactac ggaactcatc
      121 atgttctaaa aaatattaat ctttctgttc aagaaggtga gaaacttgtt attataggtc
      181 caagtggaag tggaaaaagc acaactatcc gttgtatgaa tggacttgaa gaggttagtt
      241 caggtgaggt agtagttaac aatcttgttt taaatcataa aaataaaatt gaaatttgtc
      301 gaaaatactg tgcaatggtt tttcaacatt ttaatttata tccacatatg acggttttgc
      361 aaaatttaac cttagctcca atgaaacttc aaaaaaaatc aaaaaaagaa gccgaagaaa
      421 cagcttttaa gtatttaaaa gttgtaggtt tggtagataa agcaaatgtt tatccagcaa
      481 ccctttcagg tggtcaacaa caacgtgttg ctatagcgag atcgctttgc actaaaaaac
      541 cctatatttt atttgatgag cctacttcag cacttgatcc agaaacgata caagaggttt
      601 tagatgtgat gaaggagatt tcctatcaaa gtaatactac catggtggtt gttacacacg
      661 agatgggttt tgccaaagaa gtagcagata gaattatttt tatggaggat ggtgctattg
      721 tagaagaaaa tattcctagt aaatttttct caaatccaaa aaccgaaaga gcaggactct
      781 ttttaggaaa aattcttaaa aattaaccaa aatcgaaagg agaaaaaatg gtttttaaaa
      841 aatctttatt aaagttggca gtttttgctt taggcgcttg tgttgcattt agcaatgcta
      901 atgcggcaga aggtaagctt gaatccataa aagctaaggg acaattaatt gtcggtgtta
      961 aaaatgatgt tccacattat gcgttgcttg atcaagcaac aggtgaaatt aaaggttttg
     1021 aagtggatgt tgctaaattg cttgctaaaa gtatattggg tgatgataaa aaaataaaac
     1081 tagttgcagt taatgctaaa acaaggggac ctttgcttga caacggtagt atagatgcag
     1141 tgatagcaac ttttactatt actccagaga gaaaaagaat ttataatttc tcagagcctt
     1201 attatcaaga tgctgtaggg cttttagttt taaaagagaa aaattataaa tctttagctg
     1261 atatgaaggg tgcaaatatt ggagtagctc aagctgcaac tacaaaaaaa gctataggtg
     1321 aggctgctaa aaaaattggt gttgatgtta aatttagcga atttcctgat tatccaagta
     1381 taaaagctgc tttagatgct aaaagagttg atgcgttttc tgtagacaaa tcaattttat
     1441 taggttatat agatgataaa agtgaaattt tgccagatag ttttgatcca caaagctatg
     1501 gtattgtaac taaaaaagat gatccagctt ttgcaaaata tgttgatgat tttgtaaaag
     1561 aacataaaaa tgaaattgat gctttagcaa aaaaatgggg cttgtaatat gaatgaaagt
     1621 gtaggttttg ttgaacattt aagacaaatt cttacttctt ggggtttata tgatgaaaat
     1681 agtataagcc cttttgcggt atggaaattt ttagatgctt tggataataa agacaccttt
     1741 attaatggtt ttgtttatac tttagaagta agcgttcttg ctttgcttat agctacaatt
     1801 tttggaacta taggtggagt tatggctaca agtagattta aagttatcag agcctacact
     1861 agaatttatg tggagctttt tcaaaatgtt cctttggtga tacaaatttt ctttttgttt
     1921 tatgctttgc ctgttttggg tataagactt gatatattta ctattggtgt attaggtgtt
     1981 ggggcttatc acggagctta tgtcagtgaa gttgttagaa gtggaatttt ggctgtacca
     2041 aaaggtcagt ttgaagcctc tgcttctcag gggtttactt atattcaaca aatgtattat
     2101 attatagtac ctcaaaccat taggattatt ttaccaccga tgacaaatca aatggtaaat
     2161 ttaattaaaa atacttctgt gttgcttatt gtaggtggag ctgaactaat gcattctgct
     2221 gatagttatg cggctgatta tggaaattat gcaccagctt atatatttgc agcagtttta
     2281 tattttataa tttgctatcc tttggcttat tttgcaaagg cttatgaaaa taaattaaaa
     2341 aaagcacatt taacgagata aagggttgta atggaaaatg tttttaatgc acaaaatatt
     2401 gaatttttaa tgcaaggttt atttctgaca ttaaaaatag ctttagcaac ttgtattatt
     2461 tcgattgttt ttggaacttt tttggctata actaaaaatt atggggataa attaagtaaa
     2521 tttttagcag cttgctatat agatattttt agaaatactc cgttgttgct atggatgctt
     2581 gctgcttgtt ttgttttacc tgtgtttttt gggcaatttc cccaagcttt ttggggcact
     2641 ataggatttt cactttatac aagttcagtt atggctgaaa ttattagagg tggattaaat
     2701 tctataccga aaggtcagtt tgaggcagct tattctcaag gctttggcaa attttttacc
     2761 cttttttata ttattttacc gcaaactttt agaaaaataa tacctgcttt attatctcaa
     2821 attgtaacca ctgtaaaaga tacggcttat ttggcaggtt taggcatagc tgagcttact
     2881 tataattcta aaactatatt agcaaaatta acaagtttcg aagaaatttt agcgatgata
     2941 ggtgttgttg caggaattta ttttataata tgtttttcac tttctatgtt ggtaagatat
     3001 tatgccaaaa agacggctta tgtttcttaa aaaagcttat atttttataa gcttttgaat
     3061 ttacagcagt ttttaacatt ttttttatta aaatctttta tattaattca caattttatt
     3121 gattaaggtt ttttatgcga ggttataaaa ttttttcagg ctcagctaat gtggaatttg
     3181 caagacaagt ttctaaatat ctttctttgc ctttaagcga tgctggaata aaacgtttta
     3241 gtgatgggga aattagtgtt caaattgatg agagtgtacg aggaaaagat gtttttatta
     3301 tccaaagcac ttgcgttcct acaaatgaca atttaatgga acttttaatt cttacagatg
     3361 ctttgcgtcg ttctagtgcc aattcaatta cagctattat tccatatttt ggctatgcaa
     3421 gacaagatag aaaagcaaat cctagagtgc caattactgc taaacttgta gctaatttaa
     3481 ttcaagtagc tgggattggt cgtatagcta caattgattt gcatgcagga caaattcaag
     3541 gtttttttga tattccagta gataatcttt atgggagtat agtttttaat gattatatta
     3601 aagctaagca ttttaaaaat gctattatag gaagtccaga tataggtggt gttgctagag
     3661 ctagaagtgt tgcaaagcat ttaggacttg atatagttat agttgataag cgtcgcgaaa
     3721 aagccaatga gagtgaagta atgaatatca ttggagatgt aaaagataaa gaagttattt
     3781 tagtggatga tattattgat actgcgggta ctatggtcaa agccgcagaa gctttaaaag
     3841 aaaaaggtgc aaagtctgtt atggcttgtt gtactcatgc tgttttaagt ggaaaagctt
     3901 atgaaagagt agtaagcgga gctttagatg agcttgtggt aacagatact atacctttaa
     3961 aagaacagtt atcaaatatt aaagtattaa gtgttgctcc tgtttttgct gaagtaatac
     4021 gtcgtgttta tcataatgaa agtgtaaatt ctctctttat ttaaattaaa aaagcttaaa
     4081 gattattttt aagctttttg tttttatgct acttaaagaa acaaaaatag tgtatttttt
     4141 ttaaaatgtg aaaaaactaa acatatttct atataattta atctataaat ctgatattct
     4201 ttaagaaaat attttatttt ctaggagaaa tatgactcag ttaagtacta aaattttatg
     4261 gctgtttgta gcggctttag gtgctgtttg ttttggttat ttagccttgc aaaatggcga
     4321 aagtatatca gcgatttatt tgatagttgc tgctgtgtgt atttatatga taggttatag
     4381 attttatggg cgttttgtgg cttataaggt cttagaactt gataaaaatc gtgcaacacc
     4441 agcgcttgta gaaaatgatg gacgtgattt tgtgcctaca aataaagttg tattgtttgg
     4501 gcatcatttt gctgctattg caggagcagg tccattagta ggacctatct tagctgctca
     4561 aatgggatat ttaccttcca tgctttggat tttagtaggg ggtgttttag cgggtgctgt
     4621 gcatgatttt gttgtacttt ttatatccac tcgcagaaaa ggtagaagtc ttggtgagat
     4681 gattaaggat gaaatgggta aatttacagg cggagttgct atggtggcaa tttttggcat
     4741 tatgctcatt atcattgcta ttttggctat ggtggttgta aaagctttgg cagagtctcc
     4801 atggggttta tttactattg caatgactat tcctatagca atatttatgg gaatttatat
     4861 gcgttttatc cgtccaggca gagtagggga ggcttctatt gtgggttttg tccttctaat
     4921 tttggctatt cattatggta gtgttatagc cgctgatcct tattgggcta aaatatttac
     4981 tttagaagct ccaactttag caattgttat gatggcttat ggttttgttg cttctgtttt
     5041 acctgtgtgg tttttacttg ctccaagaga ctatctttca acttttttga aaatcggtgt
     5101 tattgtggtg atggctgtag ctattgtttt agtcgctcct gatttacaaa tgccaaaagc
     5161 aaatactcaa tattttgatg gaacaggtcc agtatttgca ggtggaattt ttccattttt
     5221 atttattact attgcttgtg gagctatcag tgggtttcat gctttaattt caagtggaac
     5281 taccccaaaa atgcttgaaa atgaaactca tgctttagct gttggatatg gctctatgct
     5341 tgctgaaagt gctgtggcga ttatggcttt aatttgtgct tgtattttac atccagggct
     5401 ttattttgcc ataaattcaa gttctgcttt aataggaaca gatgtttcaa gtgtggcaca
     5461 aaccatttca agttggggtt ttagcattac tccagaggaa attactgctt taactacaaa
     5521 tataggagaa cacactatac tttcaagaac aggtggagcc ccaactttcg ctataggtgt
     5581 ggctttgatc ttgcatgagc tttttggtgg tgtggatttg atggcttttt ggtatcattt
     5641 tgcaatattg tttgaagctt tgtttatttt aacagcagtg gatgctggaa caagagcttg
     5701 tcgttttatg gtgcaagata tactaggtaa tgtctataaa cctttgggag atattcataa
     5761 ttatccagcc ggacttttag ctactgcttt aagtgttgcg ggttggggat attttcttta
     5821 tcaaggtgct attgatccta agggaggaat ttatacactt tggcctcttt ttggggtgag
     5881 taatcaaatg cttgctggta tggctttact ttttgctaca actatacttg tgaaaatggg
     5941 caaggcaaaa tacacttggg ttactttagt acctgcagtg tttgtcttag tgacaactct
     6001 gtatggagga attcaaaaaa tcatgcctta tgaagaaggt aataaagtag caaatgctgt
     6061 atctcatgta gcagccgtta gcatacaaag ccaaaaaatt aaagatttag aagttagact
     6121 aaatgatgct aaagatgaaa aagaaatttc tatgattaaa aaagaaattt caattgctgc
     6181 tcaaaataaa gttggaaatt tggttaatgc tgttctttgt gtgtttttta tgatagctac
     6241 cttgcttgtt ataatttctt gtataggaat ttgtttaggt aaaattaaaa ttcctcttaa
     6301 agaaactaaa tatattaaaa ttgatgaatt tcaaaaaatt taagtattat tatgaaaaag
     6361 ccgaaaggtt ttttcatcct ttagtgggac tttctagtta tgataagtat ttagaacata
     6421 tgaagcaaaa acatccagga aaaattccaa aaaccagagg ggaatttttc aaagaatgct
     6481 tagataaaaa atataatagc agtggtttaa ataaatgctg ataagcttaa aggataaagt
     6541 tttatcatac aaaataagct ttaagcattt aaaaaaccat gaattctttt aagctcttcg
     6601 ctaataggct ttttctttcc atcttttgta acgcttacat aggttactaa agctgaagtt
     6661 acattgatac aagaagtgca accttgagaa tctactcttt gagcactaac ttctacttca
     6721 acgctgattg aagtattgcc tacatttaca atcttagaat aacaagaaat tatatcacct
     6781 ataaaaacag gttctttaaa aactacttta tccatagaga tggttacaac acgttcagga
     6841 gaaagttctc ttgctgcaat agcccctgct aaatcgattt gtgaaagtat ccatccgcca
     6901 aaaatatttc ctgctggatt tgtatcactt ggcatagcta caatttttaa tttcggttct
     6961 cccatgtctc tcatttttac tccttatttt aaaaaataaa ttataattaa aaaagttaaa
     7021 aaggagaata aaagtatgaa taattttaaa gaaatagcta aattagttag aagatataaa
     7081 gaaaaaaata atgcattgta tgagttttta gataaagaag atttaggaga gtattttagg
     7141 tctttggttt ctttaagtga gttaaaagaa gataagacaa ccatgctagc tatacttaga
     7201 cgcttggttg atttaaagga agagaattta atccaagagt ggaaaaaaaa caatcttaaa
     7261 gaagataaga ttatagaatt aaaacataag ttctatgaag aggttagaaa attctacgag
     7321 aaagaacatc aagacttaat caacgaaata aaagaaaaaa agcttttaaa taatttttat
     7381 cagtctttac tacaaggagt gcataatata ggtttgatta tggatatttt tgaaatttct
     7441 tggactaaag aaattataga aaaaaataat aaaattttat ctatgcaatt tccgaattta
     7501 gatgatgcaa tggaattttt acgcaaaaat catctatatc aaaaaactcc ggagggagaa
     7561 atttgcgagc gaagttatgg tgtcttagtt aggataggaa atttatggaa atttgttcct
     7621 tatgcgagat tttttgagaa tgaaatttta aaattggagt atgcttttga agatatgatc
     7681 gaacagctta aaatatttgc caataacgaa gaggaaaaag cttatataga gtattttgaa
     7741 aaattaaaac tagctttttg tgaaaaagat gaagataaag ttataaaagc ttggcaagaa
     7801 gctgaatttg cttggatgaa agtgaaatca cctttacaag taggacatcc tttagaatat
     7861 tatgaagata attatacgca tgcagtagcc ttggaatggg atataaggat agaagatgag
     7921 agtgattttg atgtcttgaa atttagcagt gatattaaag aaagttttga acgtgtttat
     7981 aaaaatatag gacttgaaga ttttgaatta gaaaaagaag ttttatctaa tatagaaaaa
     8041 actcaacttt acatttgcac tccaatgata ttttatggcg ctgagcttaa aggtttattt
     8101 tcagctcaag ttgttcctaa tgatgagttt gtaagttcta aggcgggtaa aaaaatattt
     8161 gcttttataa attttgtata tgaaaatgct aaaacaaagc cttttatgaa aatttctagt
     8221 gaagtttttg ataaagaatt tttagattat ggaagaaata ttttatttta tcaagaaaaa
     8281 atttggaaaa gagtttatga ggtgtcaact ataggacatg aatttggtca tatatttttt
     8341 gttgccaatg atagtgaaaa aataatgaac cagagtggtt tttttaaaaa tatagaagaa
     8401 tacaaagcta ccacaggcgg acttgtaaat ttcttttatc atgaacaaga tgacttgata
     8461 atgcctgttt ttcatgagct tataaaaagg gctattggac ttatttcttg gcaaaaggtt
     8521 gatgaagtta agccttatta cacagaagga cttattcatc ttagtttgct ttttgaaagt
     8581 gaagttttaa tttttgaaaa taacatttta aatataaatt ttgatttaga gcattatgaa
     8641 aaatttaaag aattaacttt aaaaaattat catgacttgg caaaacatta tgctttaagg
     8701 cttgatgcaa aagagttttt aaatagattt tgtgaaattg aagataatgt ttttttccct
     8761 attatgccta aatgtaaaga atttgttaaa ttttattatg atttatatga gaaaattggc
     8821 aatgaaattg ataatagtgg agaatttgaa agatatagaa aaaataatga agttttttga
     8881 aaaacttaaa aaagttgtt
//
LOCUS       DAPWAA010000062         8754 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.062, whole genome shotgun sequence.
ACCESSION   DAPWAA010000062 DAPWAA010000000
VERSION     DAPWAA010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8754)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8754)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8754
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.062"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            55..711
                     /locus_tag="RTF91_001412"
     CDS             55..711
                     /locus_tag="RTF91_001412"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDZ4944279.1"
                     /translation="MQFLYNKQAGEELIQLQGESFKHLKARRVKENSELNLRNLQDNF
                     LYSYIITNLTRNSCTLKFLDKKSQSIKQSELNLALAIIDIKVLEKTLSFLNELGVKKL
                     HLVFTNFSQRNFKIDLERFEKIIISSCEQCGRNTKMDFIIHQSTQEFVQKFPNAIMVD
                     FQGEKQSHFNEKELYFIGPEGGFSNNERLLFNQKISLKSSNILKSQTAIIAIASKILL
                     "
     gene            790..990
                     /gene="rpmE"
                     /locus_tag="RTF91_001413"
     CDS             790..990
                     /gene="rpmE"
                     /locus_tag="RTF91_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HDZ4944280.1"
                     /translation="MKKEIHPEYIECKVSCACGNTFTTKSNKAELRVDICSNCHPFFT
                     GSEKIVDAAGRVEKFKKKYAMQ"
     gene            993..1817
                     /gene="rsmI"
                     /locus_tag="RTF91_001414"
     CDS             993..1817
                     /gene="rsmI"
                     /locus_tag="RTF91_001414"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDZ4944281.1"
                     /translation="MLYFIPTPIGNLSDISFRALELLKTCEFVFCEDTRVSKSLISLL
                     NAKFHTDIHISKFIALHSHNEKEVLANIDLNLFEKNVAYLSDAGMPGISDPGRILVEF
                     AQKNNITYEVLPGANAALVALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNLPYPS
                     IIYESPKRLLSLVEQIMILDNQREIFLVKEISKKFENKFKGNVKELFEILKKSNLNGE
                     WVLVLQPKEQNFSQNTLCEKDIIDLELSLKTKAKLLSKINGKNAKEIYQKLLLSQD"
     gene            1831..2514
                     /gene="rlmB"
                     /locus_tag="RTF91_001415"
     CDS             1831..2514
                     /gene="rlmB"
                     /locus_tag="RTF91_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDZ4944282.1"
                     /translation="MIVYGKQIFFYILEYHKDRINELYLAKECDKATFSKIVKSGLKI
                     KKLDFKTAQAYAKGGNHQGFLLDIKEGSFANLNEIKKSDFIVMLYGISDVGNIGAIAR
                     TAYALGVGALIFIGEKLAMEGVIRTSSGAALDLPIVISNDALSVINELKQIGFYFYAS
                     DGSGKEIHNVKINNGKKVLVLGSEGFGLSSKIAKKCDECVGITMKNNFDSLNVSAAFA
                     ILCDRMLNA"
     gene            2507..3442
                     /locus_tag="RTF91_001416"
     CDS             2507..3442
                     /locus_tag="RTF91_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944283.1"
                     /translation="MLNWKKIQELNLKEVAAKTQIELVFLEALVEKKFAVLSRFNVKG
                     FIKILSKEYELDFSDFNEEYEAYLNENNLTPQTKPKIITPKLDVYSQKSSNAWIFLFV
                     FIILVIIGSGIYYFDALKTFFKDEQNHTSATVVDIIGQAQENLKHLNGNNVVIIDNNK
                     IQETNQTDNVLPIQDIPSQESDQNISIENNTSENNITLSNEEKNTQTQNIDTLKTDPL
                     KEAHFKASTKIWIGLIDLKNFKKTSFVKEKDFNISLDKDQLILAGAAALTVFDQENKE
                     QKFPAGISKRFLIKDGKITSISAAEFAKLNKGKEW"
     gene            3436..4242
                     /locus_tag="RTF91_001417"
     CDS             3436..4242
                     /locus_tag="RTF91_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944284.1"
                     /translation="MVKKIIILALWANISFAISSLELAKNLVNNPNKNSQLELLFSNN
                     SYIDNNGNCDIAKISQILKTNSLIALTLSNPKSLRLNFKAKADEIMFFKILSDVLTDA
                     GYIYFIPTDLILREGNIDYTIQVESQYVLDPGTLYNLLKENSVYIDNIKRIGAYDYEY
                     DLNFSNAVLKTNTNVNLNTPKSLEKPLKDYVLNLKSATNLIIDANDLDNWFPKIFFLD
                     KNLNLIKAIKSENKNNHFSELIPNGAIYAIISDMYSLDNIRRGLKITLKK"
     gene            4254..5456
                     /locus_tag="RTF91_001418"
     CDS             4254..5456
                     /locus_tag="RTF91_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HDZ4944285.1"
                     /translation="MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPD
                     GKTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAICNWYKRKYNVNLDPENEVVATM
                     GSKEGFVNLARAIINPGDVAIVPTPAYPIHTQAFIIAGGNITKMPLTYNEKFELNENQ
                     FFEDLHKTLNESIPRPKYIVVNFPHNPTTVTCEKSFYERLVITAKKERFYIISDIAYA
                     DLTYDNYKTPSILEIEDAKDVAVETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSW
                     FDYGMYTPIQVAATIALDGDQTCVDEIRTTYDKRMYILLEAFENAGWILEKPRASMFV
                     WAKLPDNKKHLKSLEFSKQLLQRASVAVSPGVGFGEAGDEYIRIALIENENRIRQAAR
                     NIKKYLKE"
     gene            5460..6707
                     /locus_tag="RTF91_001419"
     CDS             5460..6707
                     /locus_tag="RTF91_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HDZ4944286.1"
                     /translation="MKVAILGYGTVGSAVVKFLLENNKLIRARCGQSITPVIALARSP
                     KKNALIPITHSVEEILNADVDVFVELMGGVDEAFKIVSEILKKKKAVVTANKAMLAYH
                     RYELENLAKNLAFGYEASVAGGIPIIKVLKEGLSANNILAIKGILNGTSNYILSSMSQ
                     KNMSFEQALQTAQNLGYAEADPTFDVKGQDAAHKLLVLSSIAYNLKAKPEDILIEGIS
                     EISPEDMYFANEFEFTIKLLGIAKVRENKVELRVHPTMIDKEKMLAKVDGVMNAISIN
                     GDLLGESLYYGAGAGGEATASAVISDLMDIARDQVKAPMLGFVKALEYELLSKDEIYT
                     KYYLRMKVEDKIGVLSKITQLMSKNNISIDSFLQKPKKSNESYSTLFFTTHLTYEKSI
                     QNLLEILRKQHFIKTKPFMMRIE"
     gene            6707..7045
                     /locus_tag="RTF91_001420"
     CDS             6707..7045
                     /locus_tag="RTF91_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDZ4944287.1"
                     /translation="MGLKSYLDGLLGEDKACKFLKKQGFEIIKRNFHSKFGEIDIIAR
                     KDEILHFIEVKFTQNDYEVSERLDRKKLEKILKTIEFYHLKNGISSDFQIDLICVKND
                     VIQFFENISF"
     gene            7102..7416
                     /gene="trxA"
                     /locus_tag="RTF91_001421"
     CDS             7102..7416
                     /gene="trxA"
                     /locus_tag="RTF91_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDZ4944288.1"
                     /translation="MGKYIELTSDNFAQAKEGVALVDFWAPWCGPCRMLAPVIDELAN
                     DFDGKAKICKVNTDEQGDLAAEFGVRSIPTLIFFKNGEVVDQLVGAQSKQAISDKLNS
                     LL"
     gene            7550..8488
                     /gene="trxB"
                     /locus_tag="RTF91_001422"
     CDS             7550..8488
                     /gene="trxB"
                     /locus_tag="RTF91_001422"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDZ4944289.1"
                     /translation="MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSS
                     EIENYPGVAQVMDGISFMAPWNEQCMRFGLKHEMVGVEQILKNSDGNFTIKLEGGKTE
                     LAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEES
                     LYLANICSKVYLIHRRDEFRAAPSTVEKVKKNKKIELITSASIDEVYGDKMGVTGVKV
                     KLKDGNIRDLNVPGIFTFVGLNVRNEILKQDDGKFLCDMEEGGQVSVDLKMQTSVAGL
                     FAAGDLRKDAPKQVVCAAGDGAVAALNAMTYIENLH"
BASE COUNT         3359 a         1055 c         1481 g         2859 t
ORIGIN      
        1 cttttgaaat ttttttatta tttttacctt ttttaataga aagatacttg taaaatgcaa
       61 tttttataca ataagcaagc tggagaagag ctaatacaac ttcaaggtga aagttttaag
      121 cacttaaaag caagaagagt gaaagaaaac tcagagctaa atcttagaaa tttacaagac
      181 aattttcttt atagttatat aattacaaat ttaacaagaa attcttgtac tttaaaattt
      241 ttagataaaa aatcacaaag tataaaacaa agtgaattaa acttagcctt agctatcata
      301 gatattaaag ttttagaaaa aaccctatct tttttaaatg aacttggagt aaaaaagcta
      361 catttagttt tcacaaattt ttcacaaaga aattttaaaa ttgatttaga aagatttgaa
      421 aaaatcatta tttcttcttg tgaacagtgt ggtagaaata ctaaaatgga ttttatcata
      481 caccaaagca ctcaagaatt tgttcaaaaa tttccaaatg caattatggt cgattttcaa
      541 ggagaaaaac aaagtcattt caatgaaaaa gaattatatt ttataggtcc tgaaggtgga
      601 tttagcaata atgaaagatt attgtttaac caaaaaatct ctcttaaaag ttctaatatt
      661 ttaaaaagcc aaacagctat tatagctata gcttcaaaaa ttttgcttta aattttctta
      721 aattaatctt ttttttatgt taaataattt ataatcattg cttattgttt taatttttaa
      781 ggaaaactaa tgaaaaaaga aattcatcca gaatacatag aatgcaaagt aagttgtgct
      841 tgtggaaata cctttacaac aaagtcaaac aaagcagaat taagagtaga tatttgttca
      901 aattgtcatc ctttttttac aggtagtgaa aaaatcgtag atgctgcagg tcgtgtagag
      961 aaatttaaga aaaaatacgc aatgcagtaa ttatgcttta ttttattcct actcccatag
     1021 gaaatttaag cgatatttct tttagagcct tagaactttt aaagacttgt gagtttgtgt
     1081 tttgtgaaga tacgagagta agcaagtctt tgatttcatt attaaatgca aaatttcata
     1141 ctgatataca tatttctaaa tttatagctt tacactctca taatgaaaaa gaagttttag
     1201 caaacattga tttaaattta tttgaaaaaa atgtggctta tttgagtgat gcaggaatgc
     1261 cagggattag tgaccctggt agaattttag tagaatttgc acaaaaaaat aatatcactt
     1321 atgaagtttt gccaggtgca aatgcagctt tggttgctct tgtaagttca gcattttgtc
     1381 agaaagaatt tatttttata ggttttttgg caaataaagg taaagaaaga caaaaagata
     1441 tagaaaaaat tctaaatctt ccttatccaa gtattatcta tgaatctcct aaacgtcttt
     1501 tgtctttggt agagcaaatt atgattttag ataatcaaag agaaattttt ttagttaaag
     1561 aaatcagcaa aaaatttgaa aacaaattta aaggcaatgt caaagaactt tttgagattt
     1621 taaaaaaatc caatttaaac ggtgaatggg ttttagtatt acaaccaaaa gaacaaaatt
     1681 tttcacaaaa tactctttgt gaaaaagata ttatagattt agagttgtct ttaaaaacaa
     1741 aagcaaaatt attatcaaag atcaatggaa aaaatgcaaa agaaatttat caaaaactgc
     1801 ttttaagtca agattaggta aaattttaag atgatagttt atggaaagca aatatttttt
     1861 tacattttag aatatcataa agatcgtatc aacgaacttt atttagcaaa agaatgcgac
     1921 aaagccactt tttccaaaat cgtaaaatca ggtttaaaaa ttaaaaaact tgattttaaa
     1981 accgctcaag cttatgcaaa aggtggaaat catcaaggtt ttttgctaga tattaaagaa
     2041 ggttcttttg caaatttaaa tgaaattaaa aaaagtgatt tcattgtgat gctttatgga
     2101 attagtgatg taggaaatat aggagctatc gcacgtacag cttacgcctt aggagttggg
     2161 gctttaattt ttattggtga aaaattagcc atggaaggag ttatccgtac aagcagcggc
     2221 gcagctcttg atttacctat tgtgataagt aacgatgctt taagtgtaat aaatgaacta
     2281 aaacaaatag gtttttattt ttatgcaagt gatggttcgg gaaaagaaat tcacaacgta
     2341 aaaataaata atggtaaaaa agttttagtt ttgggtagtg agggttttgg tttaagctct
     2401 aaaattgcaa aaaaatgcga tgaatgtgta ggcattacga tgaaaaataa ttttgatagt
     2461 cttaatgtca gcgccgcttt tgcaatactt tgtgatagga tgttaaatgc ttaattggaa
     2521 aaaaatacaa gaattaaatt taaaagaagt tgcagcaaaa acacaaattg aacttgtttt
     2581 tcttgaggct ttagtagaaa aaaaatttgc tgttttaagt cgttttaatg ttaaaggttt
     2641 tattaaaatt ttaagcaaag aatacgaact tgactttagt gattttaatg aagagtatga
     2701 agcttatctt aacgagaaca atcttactcc acaaacaaaa ccaaaaatca taaccccaaa
     2761 attggatgtc tatagtcaaa aatcatctaa tgcttggatt tttttgtttg tttttattat
     2821 tttagtgatt ataggaagtg gaatttatta ttttgatgcg cttaaaactt tttttaaaga
     2881 tgaacaaaat catactagtg caacagttgt agatataata ggacaagcac aagaaaattt
     2941 aaaacattta aatggaaata atgttgttat tatagataac aataagatac aagaaacaaa
     3001 tcaaacagat aatgttttac caattcaaga tatcccatca caagaaagtg atcaaaacat
     3061 aagcatagaa aataatacaa gtgaaaataa cataacctta tctaatgaag aaaaaaatac
     3121 tcaaacccaa aacatagata cactaaaaac tgatccttta aaagaagcgc attttaaagc
     3181 ctctaccaaa atttggatag gtttaataga tttaaaaaat ttcaagaaaa caagctttgt
     3241 taaagaaaaa gacttcaata tttctttaga taaggatcaa ttaattttag caggagctgc
     3301 ggctttaaca gtgtttgatc aagaaaataa agaacaaaaa tttcctgcag gaatttcaaa
     3361 acgttttcta attaaagatg gaaaaattac aagtatttca gctgctgaat ttgcaaaatt
     3421 aaacaaaggt aaagaatggt aaaaaaaatt attattcttg ctctttgggc taatatatct
     3481 tttgcaatct caagtcttga attagcaaaa aatttagtga ataatcctaa taaaaattct
     3541 caactagaat tattattttc aaataattct tatatagaca acaatggaaa ttgtgatatt
     3601 gcaaaaatat ctcaaatatt aaaaaccaat tctttaattg ccctaacact atcaaatcct
     3661 aaaagtctaa gattaaattt taaggcaaaa gctgatgaaa ttatgttctt taaaatttta
     3721 tccgatgttt taacagatgc tggatatata tattttatcc ctacagattt gattttaaga
     3781 gaaggaaata ttgattatac tatacaagta gaatctcaat atgttttaga tcctggaaca
     3841 ctttataatc tcttaaaaga aaattctgtt tacatagaca atattaagcg tattggggca
     3901 tatgattatg aatatgattt aaatttttcc aatgctgtat taaaaaccaa tacaaatgtt
     3961 aatttaaata ctccaaaatc attagaaaaa cctcttaaag actatgtact taatttaaaa
     4021 agtgctacaa atttgattat tgatgcaaat gatttagata attggtttcc taaaatcttt
     4081 tttttggata aaaatctaaa cctgattaaa gcaataaaaa gtgaaaataa aaataatcat
     4141 ttttcagaac ttattccaaa tggtgctata tacgctatta taagcgatat gtatagtttg
     4201 gataatatac gtaggggttt aaaaatcacg cttaaaaaat aaaggattaa aaaatgttcg
     4261 atgaaatccg ttttaatacc atagaaagac ttccaaatta tgttttcgcg gaagtaaatg
     4321 cgataaaaat ggcagcaagg cgtgctggag aggatatcat cgacttttca atgggaaatc
     4381 ctgatggtaa aactccacaa catattatag ataaactttg cgaaagtgct aacaaagaca
     4441 aaacttcggg atattccacc tctatgggaa tttataaact tcgtttagcc atttgcaatt
     4501 ggtataaaag aaaatataat gttaatttag atcctgaaaa tgaagtagta gctactatgg
     4561 gttcaaaaga aggttttgta aatcttgcaa gagcaattat taatcctgga gatgttgcta
     4621 ttgtgcctac tcctgcttat cctatacata ctcaagcttt tattatagca ggtggaaata
     4681 taacaaaaat gcctttaacc tacaatgaaa aatttgaact taatgaaaat caattttttg
     4741 aagatttgca taaaacctta aacgaaagta ttccgcgtcc aaaatatatc gttgtcaatt
     4801 ttccacataa cccaacaaca gtaacttgcg agaaaagttt ttatgaaaga ttagtaataa
     4861 cagcaaaaaa agaaagattt tatatcattt cagatattgc ttatgcggat ttaacttatg
     4921 ataattataa aaccccttct attttagaga tcgaagatgc aaaagatgta gcggtagaaa
     4981 cttacactct ttcaaaatct tataatatgg caggatggcg tgtgggtttt gtagtaggaa
     5041 ataaacgctt agtcagcgca cttaaaaaaa taaaatcttg gtttgattat ggtatgtata
     5101 cgcctattca agtagcagct accatagcct tagatggaga tcaaacttgc gtagatgaaa
     5161 ttcgtacaac ttatgataaa agaatgtata ttttgcttga agcttttgaa aatgcgggct
     5221 ggattttaga aaaacctaga gcgagtatgt ttgtttgggc aaaacttcct gacaataaaa
     5281 aacatttaaa aagtttagaa ttttctaagc aacttttaca gcgtgctagc gttgcagtaa
     5341 gccctggggt aggatttggt gaagcaggtg atgagtatat aagaattgct ttgattgaaa
     5401 atgaaaatcg catacgccaa gctgcacgca atatcaaaaa atatttaaaa gaataagtta
     5461 tgaaagtagc aattcttggt tatggcactg ttggaagtgc ggtagttaaa tttcttttag
     5521 aaaataataa gcttattcgt gcaagatgcg gacaaagtat tactcctgtg attgctcttg
     5581 ctagaagccc taaaaaaaat gctttaattc caatcactca tagcgttgaa gaaattttaa
     5641 atgctgatgt agatgttttt gtggaattaa tgggtggagt agatgaagct tttaaaatag
     5701 ttagcgaaat tttaaaaaag aaaaaagctg ttgtcactgc aaataaagct atgctcgctt
     5761 atcatcgtta tgaacttgaa aatttggcta aaaacttagc ctttggttat gaagcaagtg
     5821 tagctggagg aattcctatt atcaaggttt taaaggaagg cttgagtgca aataatattt
     5881 tggctataaa agggatttta aacggcacaa gcaattatat tttaagttct atgagccaaa
     5941 aaaatatgag ttttgagcaa gctttacaaa cggctcaaaa tttaggttat gcagaagctg
     6001 atccaacttt tgatgtaaaa ggacaagatg cggcacataa attacttgtt ttatcaagta
     6061 tagcttataa tcttaaggct aaacctgaag atatcttaat tgaaggtatt agtgagattt
     6121 ctcctgaaga tatgtatttt gcaaatgagt ttgaatttac catcaaactc ttaggtatag
     6181 ctaaagtacg ggaaaataaa gtagaattaa gagtgcatcc tactatgata gataaagaaa
     6241 aaatgcttgc aaaagttgat ggtgtgatga atgctataag tattaatggg gatttattag
     6301 gtgaaagttt atattatggt gctggagctg ggggagaagc tacagcaagt gctgtgattt
     6361 cagatcttat ggatatagca agagatcagg taaaagctcc tatgcttggt tttgttaaag
     6421 ctttagaata tgagctttta agcaaggatg aaatttatac aaaatattat ctaagaatga
     6481 aagtggaaga taaaataggc gttttatcta aaattacaca attgatgagt aaaaataata
     6541 tttctattga tagtttttta caaaaaccta aaaaaagtaa tgaaagttat agcactttgt
     6601 tttttactac acatttaact tatgaaaaaa gtatacaaaa tttgcttgaa attttgcgta
     6661 aacaacattt tataaaaact aagcctttta tgatgcgtat agaataatgg gactaaaatc
     6721 ctatttagat ggacttttag gcgaagataa agcttgtaag tttttaaaaa aacaaggttt
     6781 tgaaattata aaaagaaatt ttcattccaa atttggcgaa attgatataa tagctagaaa
     6841 agatgaaatt ttacatttca tagaagttaa atttacgcaa aatgattatg aagtttctga
     6901 acgtttggat agaaaaaaac ttgaaaaaat tttaaaaact atagaatttt atcatcttaa
     6961 aaatggaatt tcatcggatt tccaaattga tctgatttgc gttaaaaatg atgtgataca
     7021 atttttcgaa aatataagtt tttaagctaa tatttaaaaa aataaaatac aattagacaa
     7081 aaattaaaga aaggaaaaat tatgggaaaa tatattgaat taacaagtga taattttgct
     7141 caagcaaaag aaggtgtagc tttggttgat ttttgggctc catggtgtgg accttgtaga
     7201 atgcttgccc cagttattga cgagcttgca aatgactttg atggcaaagc taaaatttgt
     7261 aaagtaaata cagatgagca aggtgattta gcagctgaat ttggtgttcg ctctattcct
     7321 acgcttattt tctttaaaaa tggtgaagtt gtagatcaac tagttggtgc acaatctaaa
     7381 caagcaatta gtgataaatt aaactctttg ctataaaact aaggctagtt atactagcct
     7441 tctccttaaa aatttcaaat ttatactaaa taataatttt tattaactac tattaagaat
     7501 aatttttata tcattattaa taataaaatt caaaataaag gaaatataaa tgttagatgt
     7561 agcaatcata ggtggaggtc ctgctggact tagtgccgga ctttatgcaa ctagaggtgg
     7621 acttaaaaat gtggtaatgt ttgaaaaagg tatgcctgga gggcaaatta cctcaagttc
     7681 tgaaatagaa aattacccag gtgtagctca agttatggat gggatttctt ttatggcacc
     7741 ttggaatgaa caatgtatgc gttttggttt aaagcatgaa atggttggag tagaacaaat
     7801 tttaaaaaat agtgatggaa attttactat taaattagaa ggtggtaaaa cagaacttgc
     7861 caaagctgtg atagtttgca cgggttcagc tccgaaaaaa gcgggtttta aaggcgaaga
     7921 tgaatttttt ggaaaaggtg taagtacttg tgcaacttgc gatgggtttt tttataaaaa
     7981 taaagaagtc gcagttttag gcggtggaga tacagcctta gaagaatctt tgtatctagc
     8041 aaatatttgt tctaaagttt atcttatcca ccgcagagat gagtttagag cagctccatc
     8101 tacagtagaa aaagttaaaa aaaataaaaa aatagaactc attactagcg caagtataga
     8161 tgaagtatat ggtgataaaa tgggtgttac tggggtaaaa gtaaaattaa aagatggtaa
     8221 tattagggat ttaaatgttc caggaatttt tacttttgtt ggacttaatg taagaaatga
     8281 aattttaaaa caagatgacg gtaagttttt gtgcgatatg gaagaaggtg ggcaagtaag
     8341 cgttgatctt aaaatgcaaa ctagtgttgc tggacttttt gctgcaggtg atcttagaaa
     8401 agatgctcca aaacaagttg tttgcgctgc aggtgatgga gctgtagctg cactaaatgc
     8461 tatgacttat atagaaaatt tacattgatt tttatcctaa aggctagatt attttctagc
     8521 ctaatcttct ttatatcaac atccttaaaa tataaatcat gctagaattt tttaataatt
     8581 ctgcataatt agtgaagcag tggaaaaaat tttcctaaag atgatttagg gccggtgcta
     8641 aaaataatga atttacaaga aattatcgct ttacctttca tacaaggaaa gaaaaacgct
     8701 atcaacaccc tattattata aaagacttag tacaaaacaa aaatttgggt aaga
//
LOCUS       DAPWAA010000063         8515 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.063, whole genome shotgun sequence.
ACCESSION   DAPWAA010000063 DAPWAA010000000
VERSION     DAPWAA010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8515
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.063"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            129..479
                     /locus_tag="RTF91_001423"
     CDS             129..479
                     /locus_tag="RTF91_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4299 family protein"
                     /protein_id="HDZ4944290.1"
                     /translation="MEDLKLLQKRWEEAYEAMPKLYETPSGLIINFTLSEDTDTILFK
                     EPWENFELDDEDKEAKWRLSFFSISEDRPLGYLEYKEALEKLQDFSLIQSEERILIKA
                     MNLEELKSLGLKEL"
     gene            479..1108
                     /locus_tag="RTF91_001424"
     CDS             479..1108
                     /locus_tag="RTF91_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944291.1"
                     /translation="MLPQPVFLNKLTQFLSNENLDITNMKKDIDKFFSKKDFYATLEL
                     NIKIMNIAKLIFKSDKKLNIFLPQTSNYQNINYLPQELELKKEIDINLNDLKNCDNKK
                     IIEIIKQEYQNNPIKELDINSQKEKIKILFIINEVPRFLKSIYKECEFKEYGLANYLE
                     FDEIWDFYENNTRYFTVLTPMGANKIKLRLENTQESEKELNTIEIILEK"
     gene            2410..3963
                     /locus_tag="RTF91_001425"
     CDS             2410..3963
                     /locus_tag="RTF91_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HDZ4944292.1"
                     /translation="MSKNVKNLDTSFLGHPKPLLSLSLTELWERFSFYGIRPLLYLFM
                     IASFEKSGMNLKPEEASAIMGIFASCLYLAALPGGWLADNYLGQKRAILLGALIIAFG
                     HLCIAFSYFNNKMIFIGMVFLVIGTGLFKTCASVMVGMLYKKDDTRRDSGFTLFYMCF
                     NFGAFIAPLVCGFLQKEYGWHFGFGAGGIGMLLAVIIFYLKTMPDLKEFNEKVGIDST
                     WDKPSKKSKNAFYIIIVSSIVLLGAIFLIFDGFIKLDAQVINKNIIFTILACAGIYFF
                     YLFAFTSLKIEEKRNLIIFVVLFLAAALFWSVYEQQYTSFNFFAEKLTDKTVLNYEIP
                     TIWFQSLGGLFVILFAPLSAFIWTICAKNNKEISSIVKFALGLLGAALAFLMMVLASN
                     HAIDLNGGASTLKENLENSSQIILVSPWWLISSFLLMVLGELCLSPVGLSLMTKIAPN
                     LIKSQVMGLWFVASALGNALAGFIGGKASEENIAYLPNLFYECMWILLGAVIILFILK
                     KPINKILKN"
     gene            3979..5769
                     /locus_tag="RTF91_001426"
     CDS             3979..5769
                     /locus_tag="RTF91_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HDZ4944293.1"
                     /translation="MSIYKQRVLELRKLMKENNIDAYLILSADPHLSEYLPEYYKNRV
                     FISGFKGSVGTVLITQEEGFLWVDGRYWLQAHKELEGSGILLQKQDAKNTFIKWLEKN
                     LNENQILGIDFALLPLSLQKDLQINCKANLKHIDLISPLWQDRPALPQEKIYEHELQY
                     CSCSRKEKLALVRQKMKNLNANTHLISSVDDIAWLTNLRGNDVNYNPVFLSHLLIFED
                     KALLFVDQQKVNLELEKKLNSDGIWLKNYNEIIIELKKLTNANLLIEPLKMTALLINS
                     LDKSVKIIQEINPSTHLKATKNAKEIAHIQDVMVEDGVALCKFFAWLEEAIKNEELIS
                     ELDIDTKASEFRAQSKYYISNSFATIAGFNKNAAYPHYKATKESFAYLKKDGLLLIDS
                     GGQYKNGTTDITRVVPIGKANTEQIHDYTLVLKAHIAISSVIFPKDIAMPLLDAITRV
                     PLWQEQLDYIHGTGHGVGYFLNVHEGPQVLSYLSPVLEKTKAKEGMLTSIEPGIYKVG
                     KWGIRLENLVIHARVENPKNTDFGEFLYFKPVTLCPFEISCIDIKMLDEKEKQWLNNY
                     HKEVFEKLSPKLGDYPKALAWLKERTKAVS"
     gene            complement(5880..7685)
                     /gene="mrdA"
                     /locus_tag="RTF91_001427"
     CDS             complement(5880..7685)
                     /gene="mrdA"
                     /locus_tag="RTF91_001427"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDZ4944294.1"
                     /translation="MRMRLVVGFILLFFIFLLSRVYYLSIKSNVYYEELAKQNAIKTE
                     FLASVRGQIADRNGTLLAVNDLGFSISIKPYLSIKKSNKGILDKELSELANLFPDLDA
                     SKLAKIYKRSDSYYNQDFIKVIDFIPYDKIIPHYSELNLNKTIKIDPVVKRKYPFGKL
                     ASHIIGYVGKANLQDVQENEIAKLTNYTGKSGIERYYNDILQGEKGVRIYKVNALNQK
                     VEQLSYTPPISNNIELTIDIELQSYLTSLFEGNAGAAIIMDVNDGSILAAGSFPEYDL
                     NPFVTGISFKDWDELSNSLDHPFTNKLINGYYPPGSVVKMGVGLSFLNSKNISPSTQY
                     VCNGSIELGGRFFRCWNRSGHGPVDLKHAIKYSCDVYFYNGSLEVGIDQISKTLSRIG
                     FGAKTGVDLPSEFVGILPSEEWKMQRYRQAWFQGDTLNTAIGQGNFLATPMQIARYTA
                     QIAKGEEIIPHFLKGIENNNTIIENQMGKNKKEIFTLFEKSQLPYIRDAMYAVANEQG
                     GTSYRYLRNLDVKVAAKTGTAQVVGFSQTDKNRVDEKQFEYYTRSHAWLTSYAPYSKP
                     KYVVTVLLEHGGRNITSGEAVAKIYQKMIELGYFK"
     gene            complement(7685..8179)
                     /locus_tag="RTF91_001428"
     CDS             complement(7685..8179)
                     /locus_tag="RTF91_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944295.1"
                     /translation="MRRNLSTYKAKFNGVYIVLGFFFLTYQILGSIFIYDPLLYGFFF
                     CYMFCLLEERERTFSKLDFRWYFSLFFLFFTDITYNFFIFSSWLAFFIFYYFCADWVK
                     TNLKIGKFIPVVFVFCAYGIILLLDMILSYIKDEKIKILEWPYFVSIFIECCLAYVFF
                     KGKI"
     gene            complement(8176..>8515)
                     /locus_tag="RTF91_001429"
     CDS             complement(8176..>8515)
                     /locus_tag="RTF91_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDZ4944296.1"
                     /translation="YAKVSKNLKEIWNQNLDEFLKFRTSIKLFIHLIDSRHTHLEIDM
                     NLNDYLKNFLRPDQKILKVFTKCDKLNQSEKTKLKNEFKDFLLVSNLSKFGLDSLEDI
                     IINQTLGFDK"
BASE COUNT         3245 a         1171 c         1157 g         2942 t
ORIGIN      
        1 taaaaaagaa aaatgactat tcctagaaga tgatatgaat gcaactcctg atatcttagc
       61 tttgtataaa tgttttgata tgaaaagatt tttagttata atttcatttt atatttgagg
      121 agaaatttat ggaagattta aaacttttac aaaagcgttg ggaagaagct tatgaagcta
      181 tgcctaaact ttacgaaaca ccaagtggat taataataaa ttttacccta agcgaagata
      241 cagatactat tctttttaaa gaaccttggg aaaattttga attagatgat gaagataaag
      301 aagctaaatg gagactaagt ttttttagca ttagtgaaga taggccttta ggatatttag
      361 agtacaaaga agctttggaa aaattacaag atttttcttt aatacaatca gaagaaagaa
      421 ttttaattaa ggcaatgaac ttagaagagc ttaaaagctt agggcttaaa gagttataat
      481 gcttcctcaa cctgtatttt taaataaact tacgcaattt ttatctaatg agaacttaga
      541 tatcacaaac atgaaaaaag atatagataa atttttttct aaaaaagact tttacgctac
      601 attagaatta aatattaaaa ttatgaatat agcaaaatta atttttaaaa gtgataaaaa
      661 attaaatata tttttgccgc aaacttctaa ttatcaaaat ataaattatc ttccccaaga
      721 attagagttg aaaaaagaaa tagatattaa tctcaatgat ttaaaaaatt gtgataataa
      781 aaaaataata gaaataatca agcaagaata tcaaaacaat ccaattaaag aattagacat
      841 taattctcaa aaagaaaaaa taaaaatact ttttattata aatgaggtgc caagattttt
      901 aaaatcaatc tataaagaat gtgaatttaa agaatatgga ttagcaaatt atttagaatt
      961 cgatgaaatt tgggattttt atgaaaacaa tactagatat tttactgttt taacccccat
     1021 gggtgcaaac aaaataaaat tgcgtttaga aaatacacaa gaaagcgaaa aagaactcaa
     1081 taccatagaa ataattttag aaaaatagat ttttacaaca aaaaacttag cagatgatct
     1141 taaaagaagg ctaaatcaat acattaaagc ttattttaaa gaatttgcaa aaacagtttt
     1201 gtgtaagcat ttttatatag aaaaatacta aatcacagca tgccttaggt agatatgttt
     1261 tattctgaaa aagcttatta atgggaaaat tatctttata atataagtgc tatacaagat
     1321 gcttgagaaa ttcagtccaa tgaaagagat ctaagataca taaaaccttc ataggtagaa
     1381 gtttatagta agcaaaataa tgaaaattta aaataacccc gataaaatta tacgatgaaa
     1441 tcaatcaaac ccaaggcatt aagctttact atgttgaaag tgaaaaatta aacaaatttg
     1501 aattaatttc aacactagat gaaatgatgc aaaaaatgac tacaagatag taaattttaa
     1561 tgataatttg ttttattctt atcctgtatg gagtttgagg aaatttataa ttgcttatac
     1621 caagataaaa ataatttatt tttcaatctt attgatttat ttcttaaata tctcctcttt
     1681 agaatatact tagactattt gcaaaaaaag attaatgaat ggggcttaaa acatttttag
     1741 aaactcttca aaaactttaa acactataat ttaatttcac aataaatttt tattttaaac
     1801 taaaaaagac cttttaaata tgcacaatat tttaaacaaa ataagcttat ttacaacgat
     1861 caaacttgat tatttaatac aatcatcaaa acccataagt taagattact tataaaaaca
     1921 agataaactt tacaataaaa atagtataga tgttaaggat tttagcaaaa ctattaaatt
     1981 ttgtaaaaaa gtaaagtgat agaaaattta atcaaagtat tattttatag tattttaata
     2041 agaatttttt agaaatcaaa gcgagttttc atctttacat tttttacaaa cataaaaatt
     2101 tgcattacaa atcaatttta tacattattg aattttttct gatttttatc aatcttaaaa
     2161 tcctataaaa attttaaata tattatattt ttatgaaagg cattaaaaat tcaaattttg
     2221 attgcccaat caacttaaaa atataaaata aaaatgcctt aaattggaaa ttaaatatta
     2281 atatttcttt ttttatattt gtaaaaaagt aacattatga tataaataat ataaaaatat
     2341 tacaaaatta tacatattta tcaatttctt gtctataatt tataaataaa aacatacaaa
     2401 ggatagaaat tgagtaaaaa tgtaaaaaac ttagatactt cctttttagg acatccaaaa
     2461 ccacttttat ctctttcgct tactgagctt tgggaaagat tttcttttta cggaattcgc
     2521 cctttgcttt atctttttat gatagcaagt tttgaaaaaa gtggaatgaa cttaaaacct
     2581 gaagaagcaa gtgcaattat gggaattttt gcaagttgtt tatatcttgc tgctttacca
     2641 ggtggatggc ttgcagataa ttacctaggg caaaaaagag caattttact aggtgctttg
     2701 attatagcct ttgggcattt gtgcatagca ttttcttatt ttaataataa aatgattttt
     2761 atcggtatgg tttttttagt tataggtaca ggacttttta aaacttgtgc ttctgtaatg
     2821 gttggtatgc tttataaaaa agatgataca aggcgtgatt ctggttttac gcttttttat
     2881 atgtgtttta attttggtgc ttttatagct cctttggttt gtggcttttt gcaaaaagaa
     2941 tacggatggc attttggttt tggtgcaggt ggaattggta tgcttttagc agtaatcatt
     3001 ttttatttaa aaaccatgcc tgatttaaaa gaatttaatg aaaaagttgg tatagattct
     3061 acctgggata aaccaagtaa aaagagtaaa aatgcttttt atattatcat tgtatcaagt
     3121 attgttttgc ttggggcaat atttttaatc tttgatggtt ttataaaatt agatgcacaa
     3181 gttattaata aaaatattat tttcactatt ctagcttgtg ctggaattta ttttttctat
     3241 ctttttgctt ttacctcttt aaaaatagaa gaaaaaagaa atttgattat ttttgttgtt
     3301 ttatttttag cggctgcatt attttggtca gtatatgagc aacaatacac ttcttttaac
     3361 ttttttgcgg aaaaattaac agataaaacc gtattaaatt atgaaattcc tacaatatgg
     3421 tttcaatctc ttgggggctt atttgttata ctttttgcac ctttaagtgc ttttatatgg
     3481 actatttgcg ctaaaaacaa taaagaaatt tcatccattg ttaaatttgc attaggactt
     3541 ttgggtgcgg ctttagcgtt tttaatgatg gttttagctt caaatcatgc aattgattta
     3601 aatggtggtg ctagtacatt aaaagaaaat ttagaaaatt catcacaaat tattttagtt
     3661 tcgccttggt ggcttataag tagcttttta cttatggttt taggagagct ttgtctttct
     3721 cctgtagggc tttctctaat gacaaaaatt gcacctaatt taatcaaatc tcaagttatg
     3781 ggactttggt ttgtagcaag tgcattaggc aatgctttag caggatttat aggaggcaaa
     3841 gcaagtgaag aaaatatagc ttatttgcca aatttattct acgaatgtat gtggatatta
     3901 cttggtgctg ttataatttt atttatactc aaaaaaccta tcaataaaat actaaaaaat
     3961 taataccaag gagaaaaaat gagtatttac aaacaaagag tattagaact tagaaaatta
     4021 atgaaagaaa ataacattga tgcttatcta atcttaagtg cggatccgca tttaagcgaa
     4081 tatttaccag aatattacaa aaatagagtt tttatcagtg gctttaaagg ctctgttgga
     4141 acagtactta tcacacaaga agaaggcttt ttatgggtag atggaagata ttggcttcaa
     4201 gcacacaagg aattagaagg tagtggcata cttttacaaa aacaagatgc taaaaatact
     4261 tttatcaaat ggctagaaaa aaatttaaat gaaaatcaaa ttttaggcat cgattttgca
     4321 cttttacctt tgtctttgca aaaagattta cagattaatt gtaaggcaaa tttaaaacat
     4381 atagatttaa tcagcccact ttggcaagat cgccctgctt taccacaaga aaaaatttat
     4441 gaacacgagt tacaatattg ctcttgctca agaaaagaaa aattagcatt agtgcgtcaa
     4501 aaaatgaaaa atttaaatgc caatactcat ttaatctcta gcgttgatga tatagcttgg
     4561 cttacaaatt taagaggaaa tgatgtaaat tacaatcctg tatttttaag ccatttacta
     4621 atctttgaag ataaggcctt actttttgtt gatcagcaaa aagtaaattt agaacttgaa
     4681 aaaaaattaa attcagatgg aatttggctt aaaaattata atgaaattat catagagctt
     4741 aaaaaactta caaatgcaaa tttgcttatt gagcctttaa aaatgactgc tttactcata
     4801 aattctttag ataaaagtgt aaaaatcatt caagaaatca acccaagcac ccacttaaaa
     4861 gcaactaaaa atgccaaaga aatagcacac atacaagatg ttatggtaga agatggggtg
     4921 gctttatgta agttttttgc ttggcttgaa gaagcaataa aaaatgaaga attgataagc
     4981 gaattagaca tagatactaa agcaagtgaa tttagagcac aaagcaagta ttacataagt
     5041 aatagttttg ccaccatagc aggctttaat aaaaatgcag catatccaca ttataaagct
     5101 acaaaagaaa gttttgctta tcttaaaaaa gatggacttt tgcttattga ttctggtgga
     5161 caatataaaa atggcacaac agatatcaca cgtgttgtac ctataggaaa ggccaataca
     5221 gagcaaattc atgattatac tttggtttta aaagcgcata ttgccatttc tagtgtaatt
     5281 tttccaaaag atatagccat gcctttgctt gatgctatca cgcgtgtgcc tttatggcaa
     5341 gaacaacttg attacataca cggcacaggg catggcgtgg gatatttttt aaatgtccat
     5401 gaaggcccac aagttttatc ttatctatct cctgtgcttg aaaaaacaaa agccaaggaa
     5461 ggtatgttaa cttctataga accaggtatt tataaggtag gtaaatgggg tataagactt
     5521 gaaaatttag tcattcatgc cagagtagaa aatcctaaaa atacagattt tggagagttt
     5581 ttatacttca aacctgtcac tctttgtcct tttgagatat cttgcattga tataaaaatg
     5641 ttagatgaaa aagaaaaaca atggctaaat aattatcaca aagaggtatt tgaaaaactt
     5701 tctcctaaat taggtgatta tccaaaagcc ctagcttggc ttaaagaaag aacaaaagct
     5761 gtctcttaag atgcttttgt taatttataa acaatataaa atcggaaaaa atagacatat
     5821 ttgcttaatt aacttaattt tacagctata aaaggctttt ttaaaccaaa actagaaaat
     5881 tatttaaaat atccaagctc aatcattttc tgataaattt tagccacagc ttctcctgag
     5941 gtgatatttc tcccgccatg ttctaaaaga acagtaacta catattttgg tttagaataa
     6001 ggagcataag aagttaacca tgcatgagat cttgtataat actcaaattg tttttcatca
     6061 actctatttt tatctgtttg cgaaaaacct actacttgag cagttcccgt ttttgctgca
     6121 acttttacat caagattgcg caaataacga taagaagttc caccttgctc attggcaaca
     6181 gcatacattg catctcttat ataaggcaat tgactctttt caaataaggt aaaaatttct
     6241 tttttatttt tacccatttg attttctata attgtattat tattttctat accttttaaa
     6301 aaatgaggta taatctcttc gccttttgca atttgagccg tatatctagc aatttgcata
     6361 ggcgttgcaa gaaaattacc ttgacctata gctgtattta aagtatcacc ttgaaaccaa
     6421 gcctgtctat atctttgcat tttccattct tcgcttggta agattcccac aaattcacta
     6481 ggtaaatcca ctcctgtttt tgctccaaag ccaatacgag ataaggtttt acttatttga
     6541 tcaattccaa cctccaaact gccattataa aaataaacat cacaactata ttttatcgca
     6601 tgttttaaat ccacaggtcc atgccctgat ctattccagc atctaaaaaa cctacctcca
     6661 agttcgatac ttccattgca aacatattga gtcgatggac taatattttt agaatttaaa
     6721 aaagaaagcc ctacacccat ttttacaaca gaacctggag gataatatcc atttataagt
     6781 ttatttgtaa aaggatggtc aaggctattt gaaagctcat cccaatcctt aaatgaaatc
     6841 cccgttacaa aaggattaag atcgtattca ggaaaacttc ctgcagccaa aatagatcca
     6901 tcatttacat ccataattat agcggctccg gcattgccct caaacaatga agttaaataa
     6961 gactgaagct ctatatcaat cgtaagctct atattattag atataggagg agtgtaagaa
     7021 agctgctcta ctttttggtt taaggcatta accttataaa ttctaactcc tttttctcct
     7081 tgcaaaatat cattataata ccgttctata ccactttttc ctgtataatt agtaagcttt
     7141 gctatttcat tttcttgaac atcttgcaaa tttgctttac ccacgtatcc aataatatgt
     7201 gaagccaatt ttccaaaagg gtattttctt tttacaacag gatctatttt tattgtttta
     7261 ttaagattta attctgaata atgcggaatg attttatcat aaggtataaa atctataact
     7321 ttaataaaat cttgattata gtaagaatca cttctcttat aaatctttgc taatttgcta
     7381 gcatctaaat caggaaataa atttgcaagt tcagataatt ctttatctaa aattccttta
     7441 tttgatttct taatgcttaa ataaggttta atagaaatgc taaaacctaa atcgttaaca
     7501 gctaacaaag ttccatttct atctgcaatt tgccccctaa cagatgctaa aaattcagtt
     7561 tttatagcat tttgcttagc aagttcttca taatatacat ttgattttat gctcaaataa
     7621 tacacacgac ttaataaaaa tataaaaaac aatagtataa acccaacaac caatcgcatt
     7681 ctcattaaat tttaccttta aaaaatacat aggctaaaca acattctata aaaattgaaa
     7741 caaaatatgg ccattctaaa attttaattt tttcatcttt aatataagat agtatcatat
     7801 ccaaaagcaa aataatacca taagcacaaa acacaaaaac aactggaata aatttaccaa
     7861 tttttaaatt tgttttaacc caatctgcac aaaaatagta aaaaataaaa aatgccaacc
     7921 aagatgaaaa aataaagaaa ttataagtta tatcagtaaa aaataaaaaa aataaagaaa
     7981 aataccatct aaaatcaagc tttgaaaaag ttctttctct ctcttctaac aaacaaaaca
     8041 tataacagaa aaaaaatcca taaagcaacg gatcgtatat aaaaattgaa ccaagaatct
     8101 gataagttag aaaaaaaaat cctaaaacaa tataaactcc attaaatttt gctttataag
     8161 tacttaaatt tcttctcatt tgtcaaaacc taaagtttga tttataataa tatcttctaa
     8221 agaatcaagg ccaaatttac tcaaatttga aactaaaaga aaatctttaa attcattctt
     8281 tagcttagtt ttttcacttt gatttaattt atcacattta gtaaagactt ttaaaatttt
     8341 ttgatcgggt cgtaaaaaat ttttcaaata atcatttaaa ttcatatcaa tctctaaatg
     8401 agtatgtctt gagtcaatta aatgtataaa tagctttatc gaagttctaa attttaaaaa
     8461 ttcatctaag ttttgattcc atatttcttt taaattttta gaaacttttg catat
//
LOCUS       DAPWAA010000064         8392 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.064, whole genome shotgun sequence.
ACCESSION   DAPWAA010000064 DAPWAA010000000
VERSION     DAPWAA010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8392
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.064"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            38..1129
                     /locus_tag="RTF91_001430"
     CDS             38..1129
                     /locus_tag="RTF91_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HDZ4944297.1"
                     /translation="MKTNFLAHSAVIVYSNFKGLLFTACIVIFAMYLSSVLKDATHLA
                     ATAFAIIIGVLLSPWFFKYQRHFQAGVHFSAKKLLRLGIVLYGFNITLTELLSIGFKG
                     FLLSAIVIFFVFIIALFVGMKIFKLDQETSMLVGAGSAICGAAAVLALESSLKSDPFK
                     GILAVGTVVIFGLVFMFLYPIAFSLGAFPFFDQNAMGVFMGATLHEVANVAGAAEMAK
                     DMAGFEQGASNIAVIIKMMRVILLVPFLLIVTYFFAKNQHSSSGKTAKNITIPYFAFA
                     FLGMIVLNTYLASKESILGIATSDIIFLGKMLCTLCIVFAMAALGLQIDFEKFVKSGS
                     RVFGLAFVLGIFLIFGGYFLTLAFKGILW"
     gene            1218..1790
                     /locus_tag="RTF91_001431"
     CDS             1218..1790
                     /locus_tag="RTF91_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944298.1"
                     /translation="MKKFLVSVFSFCLLASALSAVSFKEDSLKISFEGYKTKDMIGTK
                     GEFKNVEYKFSKNTKDLASYLKGAKATIKPSDAFMGEGLDIITNNITKVFFPALLGDT
                     DIKVVFQDVIVGENKGVISAKITMDKKSTIVPLTYTIKDDKFEAKGQLDLHTFKNASK
                     ALKALSDVAPGHGGISWPLVDISFNADLVE"
     gene            complement(1805..2371)
                     /gene="rsmG"
                     /locus_tag="RTF91_001432"
     CDS             complement(1805..2371)
                     /gene="rsmG"
                     /locus_tag="RTF91_001432"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDZ4944299.1"
                     /translation="MIFQTYDFLQNYDLKDFEKKVKIYKELLQKFNRIHNLTHLKNID
                     ENILDSVKILNFYDFSKAKNIADIGSGAGFPAIFLAFLLQSNFHLFEPNPKKAAFLRT
                     LKIECELLNLHIYKEKVQECKNTFKADIITSRALMDIKPLLEICKNLKNKNTVFILWK
                     GSEIYQELENIKDYKIFENDLRRYCILK"
     gene            complement(2372..2932)
                     /gene="ribA"
                     /locus_tag="RTF91_001433"
     CDS             complement(2372..2932)
                     /gene="ribA"
                     /locus_tag="RTF91_001433"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HDZ4944300.1"
                     /translation="MKIKISEIANLPSKWGNFQMQSFKENEKEHLCIFKNIPKDTLNL
                     RIHSECLTGDALGSLKCDCGEQLEFSLKYIEKNGGMVIYLRQEGRGIGLFNKINAYAL
                     QDQGFDTIKANHQLGFKADERTYEIVEFILKHYEISKVNLLTNNPEKLESIKEKIITR
                     VPILIEPNRFNAEYLNIKQTQMGHLK"
     gene            2989..3972
                     /gene="hemB"
                     /locus_tag="RTF91_001434"
     CDS             2989..3972
                     /gene="hemB"
                     /locus_tag="RTF91_001434"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDZ4944301.1"
                     /translation="MFKRFRRLRLNENLRTMVRENSLSVNDLIYPLFVVNGTGIKKEI
                     SSMPDVFQMSLDEILKECKNVINLGIKAIILFGVLENEKKDSCGSDALDDEGLIATTI
                     REIKKNFPDLFVISDLCFCEYTDHGHCGIINPKTKSVDNDATLEISAKQALVHARSGV
                     DMIAPSGMMDGIITALRKALDSEGFENLPIMGYSTKFASSYYGPFRDVAESAPSYGDR
                     KSYQMDFANGKEALEESLEDETQGADVLMVKPALAYLDVVKEISLHSNLPLCVYNVSG
                     EYAMLKAAGNARVIDYEKVLYETMIAFKRAGAKLIITYHAKELAKMLKGEK"
     gene            3969..4889
                     /gene="argF"
                     /locus_tag="RTF91_001435"
     CDS             3969..4889
                     /gene="argF"
                     /locus_tag="RTF91_001435"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDZ4944302.1"
                     /translation="MKHFLTLRDFSNEEILSLVNHAAELKKEPKKLLQDKTLAMIFEK
                     NSTRTRMAFELAITELGGKALFLSGNDLQLSRGEPVKDTARVIGAMVDFVMMRVNKHE
                     TLLEFARYSKAPVINALSELYHPTQVLGDLLTIKEWDKIQNGVAKVAFVGDSNNMCNS
                     WLIAAAILGFEFSIAIPKNYGINPEIWEFAMKQALISGAKISLSHDKFEALKDKDVVI
                     TDTWVSMGEENEKERKIKEFEGFMIDEKAMNIANKDAILLHCLPAYRGYEVSEEIFEK
                     HADVIFKEAKNRLYVVKSLLCFLNNQKGRE"
     gene            4886..5377
                     /locus_tag="RTF91_001436"
     CDS             4886..5377
                     /locus_tag="RTF91_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2603 domain-containing protein"
                     /protein_id="HDZ4944303.1"
                     /translation="MKELEKYSTCLKRIDEFSQNLGIKKKDRTIFKMKKSENENEKCL
                     VLENGSFESPEPWFVIDENGEIHTLLSLQSLKNILESLKQSQKENFELRLEKAIYQQI
                     PVDFNDVWTVAMDEIKQNAKNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNQN
                     ERL"
     gene            5364..6719
                     /gene="hemN"
                     /locus_tag="RTF91_001437"
     CDS             5364..6719
                     /gene="hemN"
                     /locus_tag="RTF91_001437"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDZ4944304.1"
                     /translation="MRDYKAFVKYSKAGPRYTSYPTAVEFNTHFKYEEYIEILKKQDS
                     FLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLAYIFKELDILNTILDTQRQVVQM
                     HFGGGTPTFFSAKQLESLILKIKSIFRNFSKDAEISCEIDPRFLNEDQAAVLTQNGFN
                     RISFGVQDFDEKVQKEIHRIQPFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFT
                     QTLEKVTLLNPDRLAIFNYAHVPWLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNG
                     YKMIGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIGEGQRHYAQN
                     FKDMSSYEIALDKGILPFERGVILSDDDELRKAVIMELMANFKLDIKSIEKEFSIDFK
                     AYFKEDLKALEEYKDFINLDENFIKVNETGVLLIRNIAMCFDAYMKNISEDKKVFSKT
                     V"
     gene            6721..7986
                     /locus_tag="RTF91_001438"
     CDS             6721..7986
                     /locus_tag="RTF91_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDZ4944305.1"
                     /translation="MKFSQISDACVKCGKCIPVCTIHDINPDESTSPRGFLDLLSAYK
                     DGNLELNKEAKKVFESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKKFGIAWYKKLIF
                     FFLRRRKILDLVAKLGYVFQSCAFKIQSENENAGMKARFSMPFIKKGRLLTSFNKKSF
                     LNSNPKFINNDGEKTIGFFVGCLANYFYIDTANAVLKITKELKINVDLMKDQVCCGAP
                     QFFTGDFKSVEILAKKNIEYFEKKLEKLDAIIVPEATCSAMLKIDYEHFFIIQNDLEW
                     AKRAKYISSKIYMASEYFYKFTSLEELLKTKNKFNYSITYHDPCHARKMQGVFKEPRE
                     LLKTNYHFVEMSNSNACCGFGGVSMQTDYYERALSVGLRKAQMIDESKASVVSAECSA
                     CRMQISNALEQNSSKVVFASPLELIVKAL"
     gene            7988..>8392
                     /locus_tag="RTF91_001439"
     CDS             7988..>8392
                     /locus_tag="RTF91_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944306.1"
                     /translation="MKIVFKGKSSEYEIQRSSFCIDAFVIKDKIEERDGVDFITSNIR
                     VLEFSDDSFTFEEIVKHLNVCNSEDMIIVEDFDMKSSKDNQKQEENIEDNIIESKKTI
                     HKSTKQISIQFKNLKFFSRIFKNENFLSDFNEG"
BASE COUNT         2929 a          956 c         1545 g         2962 t
ORIGIN      
        1 aatataatag cacaaaaatt acaaaaagaa ggaaaaaatg aaaacaaatt ttttagcaca
       61 tagtgcagtt atagtgtatt caaattttaa aggtttgctt tttactgctt gtattgtgat
      121 ttttgctatg tatctttcta gtgttcttaa agatgctaca catttggcag cgactgcttt
      181 tgctattatc ataggagttt tactttctcc ttggtttttt aaatatcagc gtcattttca
      241 agctggagta cattttagcg cgaaaaagct tttaagactt ggcattgttt tatatggttt
      301 taatatcact ttaaccgaac ttttaagcat agggtttaaa ggatttttac tttctgctat
      361 agtgatattt tttgttttta taatagcttt gtttgtagga atgaaaattt tcaaactcga
      421 tcaagaaact tctatgctcg ttggagctgg aagtgcaatt tgcggtgcag cagcagtttt
      481 ggcattagag tcaagtttga aaagtgatcc ttttaaggga attttagctg tgggcactgt
      541 agtgattttt ggacttgtgt ttatgttttt atatcctata gctttttctt taggtgcttt
      601 tccttttttt gatcaaaatg ctatgggagt ttttatgggt gctactttgc atgaggtggc
      661 aaatgtcgca ggtgctgctg aaatggcaaa agatatggca gggtttgaac aaggtgcttc
      721 taatattgcg gtgattataa aaatgatgag agtgatttta cttgttcctt ttttgcttat
      781 agtgacttat tttttcgcta aaaatcaaca ttcaagtagt ggaaaaactg caaaaaatat
      841 tactatacct tattttgctt ttgcattttt gggaatgata gttttaaaca cttacttagc
      901 aagcaaagaa agtattttag gtattgctac aagcgacatt atttttttag gtaaaatgct
      961 ttgtaccttg tgtatcgttt ttgctatggc tgctttaggt ttgcaaattg attttgaaaa
     1021 gtttgtaaaa agtggttcta gagtgtttgg tttggctttt gttttaggaa tttttttgat
     1081 ttttggagga tattttttaa ctttagcttt taaaggtata ctttggtaat aaaaattatt
     1141 ttttaaaaaa atatatttcg ttaatcaagt aagaatataa tttcattgaa tttaaattat
     1201 attaaaaagg aatcaagatg aaaaaatttc tcgtaagtgt ttttagtttt tgtttgttgg
     1261 cttcggcttt aagtgctgta tcttttaaag aagatagttt aaaaatatct tttgaaggat
     1321 ataaaactaa agatatgata ggaacaaaag gtgaatttaa aaatgtagaa tataaatttt
     1381 ctaaaaatac aaaggatttg gcaagttatc ttaaaggtgc taaagctact ataaaaccaa
     1441 gtgatgcttt tatgggcgag gggcttgata ttataactaa taatattaca aaagtatttt
     1501 ttcctgcttt attaggagat acggatatta aggttgtttt tcaagatgtg attgtaggtg
     1561 aaaataaagg tgttatttct gcaaaaatta ctatggataa aaaaagtact attgtgcctt
     1621 taacttatac cattaaagat gataaatttg aagctaaagg gcagcttgat ttacatactt
     1681 ttaaaaatgc ttctaaagca ttaaaagcat taagtgatgt tgctccagga catggcggaa
     1741 tttcttggcc tttagtagat attagcttta atgctgactt agtagaataa aagtagcctt
     1801 agggctactt taaaatacaa tacctcctca aatcattttc gaaaatttta taatctttta
     1861 tattttcaag ctcttgataa atttcactgc ctttccataa aataaaaact gtatttttat
     1921 tttttagatt tttacaaatt tcaagtaagg gtttgatatc cattaaggct cttgaagtga
     1981 tgatatcagc tttaaaggta tttttgcatt cttgaacttt ttctttgtag atatgtaaat
     2041 ttaaaagttc gcattctatt tttagtgttc ttaaaaaggc ggcctttttg ggattgggtt
     2101 cgaaaagatg gaaattgctt tgaagtaaaa aggctaaaaa tatagctgga aatcccgctc
     2161 cacttcctat atcggcgata ttttttgctt tagaaaaatc ataaaaattt aaaattttaa
     2221 cgctatcaag gatattttca tctatgtttt ttaaatgagt aagattatga atgcggttaa
     2281 atttttgcaa taattctttg taaattttta cttttttttc aaagtctttt aaatcatagt
     2341 tttgtaaaaa atcataagtt tgaaaaatca tttatttaag atgtcccatt tgagtttgtt
     2401 ttatatttaa atattctgca ttaaaacgat taggctctat taaaatcggt acgcgtgtga
     2461 tgattttttc tttaattgat tctagttttt cagggttatt tgtgagtaaa tttaccttag
     2521 aaatttcata gtgtttgagt ataaattcta cgatttcata agttctctca tcagctttaa
     2581 agccaagttg atgatttgct ttgattgtat caaaaccttg atcttgtaag gcataggcat
     2641 tgatcttgtt aaaaagtcct atgcctcttc cttcttgtct aagataaatt accattccac
     2701 catttttttc tatgtatttt aaggaaaatt caagctgttc cccgcaatca cattttaaac
     2761 ttcctaaagc atcgcctgta aggcattctg aatgtattct tagattgagt gtatcttttg
     2821 ggatattttt aaatatacat aaatgttctt tttcattttc tttaaaactt tgcatttgga
     2881 aatttcccca tttactaggt aaattcgcaa tttctgaaat ttttattttc attttactac
     2941 cctctataat caaaattatg ttaagatttt agcaaaaaaa ggacaaaaat gtttaaaaga
     3001 tttagaagat taaggcttaa tgagaactta agaactatgg taagggaaaa ttctttaagt
     3061 gtaaatgatt tgatttatcc actttttgta gtcaatggaa caggtataaa aaaagaaatt
     3121 tcctctatgc ctgatgtgtt tcaaatgagc ttagatgaaa ttttaaaaga gtgtaaaaat
     3181 gtaataaatt tgggcattaa agctattata ctttttggtg tccttgaaaa tgagaaaaaa
     3241 gatagttgtg gaagtgatgc attagatgat gaagggctta ttgcaacaac tataagagag
     3301 attaagaaaa attttccaga tctttttgta atcagtgatc tttgcttttg tgaatataca
     3361 gatcatggac actgtggtat aatcaatcct aaaacaaaaa gcgtggataa tgatgcgact
     3421 ttagaaattt cagccaaaca ggctttagtt catgcaagat ccggtgtgga catgatagct
     3481 cctagtggaa tgatggatgg tattatcact gctttgcgta aagctttaga tagtgaaggt
     3541 tttgaaaatt tacctataat ggggtattcg actaaatttg cttcgagtta ttatggtcct
     3601 tttcgtgatg tagcagaatc agctccaagt tatggagata gaaaaagtta tcaaatggat
     3661 tttgccaatg gcaaagaagc tttagaagaa agcttagaag atgaaacaca aggagccgat
     3721 gttttgatgg taaaacctgc tcttgcttat cttgatgtag taaaagaaat atcacttcat
     3781 tctaatttgc ctttgtgtgt ttataatgta agtggagaat atgctatgtt aaaagcagcg
     3841 ggaaatgcta gagtgattga ttatgaaaaa gttttatatg agacaatgat agcttttaaa
     3901 agagcgggtg caaagcttat cattacttat cacgctaaag aattagccaa aatgttaaaa
     3961 ggagaaaaat gaaacatttt ttaactttaa gagatttttc taatgaagaa attttaagcc
     4021 ttgtgaacca tgctgccgag cttaaaaaag aacctaaaaa acttttgcaa gataaaactt
     4081 tggcgatgat ttttgaaaaa aattctacaa gaacaagaat ggcctttgag ttagctataa
     4141 cagaacttgg tgggaaagct ttgtttttaa gcggcaatga tttacagctt agtcgtggtg
     4201 aacctgtaaa agatacagct agggtgatag gagcaatggt tgattttgtg atgatgagag
     4261 taaataaaca cgaaactttg ctagaatttg caagatattc taaagcccct gtaatcaacg
     4321 ccttaagcga actttatcat cctactcaag ttttagggga tttactcact attaaagagt
     4381 gggataagat acaaaatggt gtagcaaaag ttgcctttgt cggagatagt aataatatgt
     4441 gtaattcttg gcttattgca gctgcgattt taggttttga atttagcata gctataccaa
     4501 aaaactatgg aattaatcct gaaatttggg aatttgctat gaaacaagct ttgatttcag
     4561 gagcgaaaat ttctttaagc cacgataaat ttgaagcctt aaaagataaa gatgtggtga
     4621 ttactgatac ttgggtttcg atgggtgaag agaatgaaaa agagcgcaag ataaaagaat
     4681 ttgaaggatt tatgattgat gaaaaggcta tgaatatagc caataaagac gctattttac
     4741 ttcattgttt acctgcttat aggggttatg aagtcagtga agaaattttt gaaaaacatg
     4801 cagatgtgat ttttaaagaa gcaaaaaatc gcctttatgt ggtaaaatct ttgctttgct
     4861 ttttgaataa tcagaaagga agagaatgaa agagctagaa aaatatagca cttgtttaaa
     4921 acgtattgat gaatttagtc aaaacttagg tataaagaaa aaagatagaa ctatttttaa
     4981 aatgaaaaaa agtgagaatg agaacgaaaa atgtttagtt cttgaaaatg gtagctttga
     5041 gtctccagaa ccttggtttg tgatagatga aaatggtgaa attcacactt tgctttcttt
     5101 gcaaagtctt aaaaatatac ttgaaagttt aaagcaaagt caaaaagaaa attttgaatt
     5161 gcgtttagaa aaggcaattt atcaacaaat ccctgtagac tttaatgatg tttggacggt
     5221 tgctatggat gagattaagc aaaacgcaaa aaatgggact atggaggtta gcattgatct
     5281 tgagaaattg atttctaaaa ttaaacaaga gcatccaaat ttatttgtag atatgcaagc
     5341 gatgatagaa agggtaaatc aaaatgagag attataaggc ttttgtaaaa tactctaaag
     5401 caggacctcg ttatacttct tatcctacgg cagtggaatt taatacgcat tttaaatatg
     5461 aagaatatat agaaatttta aaaaaacaag acagtttttt atcactttat tttcatttac
     5521 ctttttgtag aagcgcctgt tatttttgtg gttgtaatgt tatttatact gcaaaagaag
     5581 aaagtaaaga aaggtattta gcttatattt ttaaagaact tgatatttta aatactattt
     5641 tagatactca acgtcaagtg gtacaaatgc attttggggg tggaacacct acatttttta
     5701 gtgcaaaaca acttgaaagt ttgattttaa aaatcaagtc catctttaga aatttttcta
     5761 aagatgcaga gattagttgt gaaattgatc cgcgtttttt aaacgaggat caagctgcag
     5821 ttttaacaca aaatggtttt aatcgcatca gttttggagt tcaggatttt gatgaaaaag
     5881 tccaaaaaga aattcatcga attcagcctt ttgagctgac gcaaaatgct ttaaatcttg
     5941 taagaaataa agggattaag tctgtaaata tggacttaat ttatggctta ccttatcaaa
     6001 atttacaaag ttttacgcaa actttagaaa aagttacgct tttaaatcct gatcgtttag
     6061 cgatttttaa ttatgctcat gtgccttggc ttaaaaaaaa tatgagaaaa tttgatgaaa
     6121 atactttgcc aagtcctgat gtaaaacttg aaattttaga gttttgtgag aagtttttaa
     6181 gtaaaaatgg ctataagatg ataggaatgg atcattttgc aaaagaaaat gatgaacttt
     6241 ttaaagcttt agaaaatggc actttacata gaaattttca aggttatact actaaaggtg
     6301 gtgctgactt ggttggtgta gggcttacaa gtataggtga aggacaaaga cattatgcac
     6361 aaaatttcaa agatatgtca agctatgaga ttgcgttaga taaaggaatt ttgccttttg
     6421 aaagaggcgt tattttaagt gatgatgatg agcttaggaa agcagtgatt atggaattaa
     6481 tggcaaattt caaacttgat ataaaatcaa tagaaaaaga attttctatt gattttaaag
     6541 catattttaa agaagattta aaagctttag aagaatataa agattttatc aatttagatg
     6601 aaaattttat taaagttaat gaaacaggag ttttgctcat acgcaatatc gctatgtgtt
     6661 ttgatgctta tatgaaaaat attagcgaag ataaaaaagt tttttcaaaa acggtgtaaa
     6721 atgaaattta gccaaataag tgatgcttgt gttaaatgtg gtaaatgtat acctgtttgc
     6781 actatacacg atattaatcc tgatgaaagc acaagtccta gagggttttt ggatctttta
     6841 agtgcttata aagatggaaa tttagaactt aataaagaag ctaaaaaagt ttttgaatct
     6901 tgttttttat gtactaattg cgttgaagtg tgtccaagca aactaagagt agataatgct
     6961 atagaagaag tgcgttatga tatagctaag aaatttggta tagcttggta taaaaaactt
     7021 atttttttct ttttgagaag acgtaaaatt ttagatttag tagcaaaatt gggctatgta
     7081 tttcaaagtt gtgcttttaa aatccaaagt gagaatgaaa atgcagggat gaaggcgaga
     7141 ttttctatgc cttttattaa aaaaggaaga ttgcttacaa gttttaataa aaagagtttt
     7201 ttaaattcta atccaaaatt cattaacaat gatggagaaa aaaccatagg tttttttgtg
     7261 ggttgtttgg caaattattt ttacatagat acggccaatg cggtgcttaa aatcactaaa
     7321 gaattaaaaa tcaatgtaga tttaatgaaa gatcaagtat gttgtggtgc accacaattt
     7381 tttacgggcg attttaaaag tgttgaaatt ttggctaaaa aaaatataga gtattttgaa
     7441 aaaaaattag aaaaattaga tgctattata gttcctgaag cgacttgttc ggctatgcta
     7501 aagatagatt atgagcattt ttttatcata caaaatgatt tagaatgggc aaaacgcgca
     7561 aaatatatat cgtctaagat ctatatggct agtgagtatt tttataaatt tacttctttg
     7621 gaagaacttt taaaaacaaa aaataaattt aattatagca ttacctacca tgatccttgt
     7681 catgcaagaa aaatgcaagg ggtttttaaa gagccaagag aacttttaaa aacaaattat
     7741 cattttgttg aaatgagcaa ttctaatgct tgttgcggtt ttggtggagt gagtatgcaa
     7801 acagattatt acgaaagagc tttaagcgta ggacttagaa aagcacaaat gatagatgaa
     7861 agcaaagcta gtgtggtgag tgctgagtgt tcagcttgta gaatgcaaat ttcaaatgct
     7921 ttagaacaaa attcaagcaa ggttgttttt gctagtcctt tagaacttat agtaaaagct
     7981 ttgtgatatg aagatagtat ttaaaggtaa aagctctgaa tatgaaattc aaagatcatc
     8041 cttttgtatt gatgcttttg tgattaaaga caagattgaa gaacgagatg gtgttgattt
     8101 tattacttca aatataaggg ttttagaatt tagtgatgat agttttactt ttgaagaaat
     8161 tgtaaaacat ttgaatgttt gcaatagcga agatatgatt attgttgaag attttgatat
     8221 gaaatcaagt aaagataatc aaaaacaaga agaaaatata gaagataata ttatagaatc
     8281 caaaaaaaca atacacaaaa gcacaaagca aataagtata caatttaaaa atctaaaatt
     8341 tttttcaaga atttttaaaa atgaaaattt cctttcagat tttaacgaag gt
//
LOCUS       DAPWAA010000065         8054 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.065, whole genome shotgun sequence.
ACCESSION   DAPWAA010000065 DAPWAA010000000
VERSION     DAPWAA010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8054
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.065"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            50..544
                     /locus_tag="RTF91_001440"
     CDS             50..544
                     /locus_tag="RTF91_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HDZ4944307.1"
                     /translation="MKEIVLSEDALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKP
                     HNIVRHEDMPRTVFKCLWDSIQKGDEIFAFVKNKAKDGSFYWVFANVTASFDANGNII
                     NYYSVRRAPNRKSISTIESVYKILLEKEQKLGINAGVSALIDIVSSYKTTYNELIFSL
                     QKDN"
     gene            671..2050
                     /locus_tag="RTF91_001441"
     CDS             671..2050
                     /locus_tag="RTF91_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944308.1"
                     /translation="MMKYGLLSTIFLSIIGVLGIIFIHFYVGVIIFILITTLMIYLLE
                     QYKDEQIMIDKFLFLSRELKEGNFDNRIIYIKTKNKKLAEIADNLNNTIDGLEAYLRE
                     INTSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEITARSTFKNALSRTLMD
                     LSLGNQNKDMSQISNSLNQDISMMKNVYDTVGAITHTATENASEVNSLQNAMGSLMDV
                     VNSSKETVQTFVVNSQNISSVVEVIRDIADQINLLALNAAIEAARAGEHGRGFAVVAD
                     EVRKLAERTQRSTSEISIAVQTMQQDFVNIQSGSEQVFNIVSESEERINKFSQAFKRL
                     EENSSALGVNFGSFVKRLILSIVKIDHILYKSNIYLNLNGTQNFNLESVDPISNLCQD
                     EIAQGVINELSSETELNLAKEFIKNNAKKAIEESNQDYIDQKAYDTIVNDIKSLEKRS
                     AEILAKLKI"
     gene            2066..2563
                     /locus_tag="RTF91_001442"
     CDS             2066..2563
                     /locus_tag="RTF91_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HDZ4944309.1"
                     /translation="MSREIFLQKDSLITSKTDLKGKIVYANHDFLKYAGYTMGEVLNK
                     PHNIVRHEDMPKTVFKYLWDYMREGKEIFAYVKNKTKDNSYYWVFANVTPSIDINNNI
                     IGYYSVRRMPNKNAISKVESLYNDLLKIEQQQGLNKGVEMLKNFCKDTGKTYNELIFS
                     LQEAK"
     gene            2650..4509
                     /gene="mnmG"
                     /locus_tag="RTF91_001443"
     CDS             2650..4509
                     /gene="mnmG"
                     /locus_tag="RTF91_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDZ4944310.1"
                     /translation="MFDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNP
                     AIGGLAKGHLVKELDAIGGLMGEITDEAGIQFRILNESKGIAVQGSRAQIDMDKYRII
                     ARNKLLKLSNLEISQEQASTLIIENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHV
                     GENKLQAGRVGELASVNLGNYLQTLDLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVN
                     PKAFSFRSRNFNPTQLPCYIARTNTTTHEIIKSNFYRAPLFTGQIEGVGPRYCPSIED
                     KINRFSDKESHHLFIEPQTIDATEYYINGFSTSLPYEVQAQMLHSIKGFENAKITRFG
                     YAIEYDYIEPTELKHTLELKKIKNLYCAGQINGTTGYEEAAAQGLMAGINASLSIDTK
                     EPLILRRDEAYIGVLIDDLVVKGTKEPYRMFTSRAEFRLFLREENAILRLGKYGYDLG
                     LLSEQDFAYIQNIANNLQKGLEFLLSKKFTPNNQNNAFLESLGEDKISSIVNLQKIVA
                     RASFNVEKLKKLNPMFEAMDNYSLREILNEAKYYHYISMQKAQVEKMKNLSELKIPEN
                     FDFKSVSGLSNEVIEKLNHHKPPTIFAASQISGITPAALDILQIYIKMQKKKA"
     gene            5080..5583
                     /gene="petA"
                     /locus_tag="RTF91_001444"
     CDS             5080..5583
                     /gene="petA"
                     /locus_tag="RTF91_001444"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HDZ4944311.1"
                     /translation="MATSESRRSFMGFAFGSVAAVGGVFSLVAMKKTWDPLPSVKAAG
                     FTTVDLSGMQDGELRTIEWRKKPIFILKKDASMPKDEKRDVVVDNAAYTVVIGLCTHL
                     GCIPAYQPSEQLFKCACHGGEFDISGKNVFGPPPKPLEIPPFKIDGTKLVLGEEGPEY
                     KKMIAEA"
     gene            5585..6835
                     /locus_tag="RTF91_001445"
     CDS             5585..6835
                     /locus_tag="RTF91_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HDZ4944312.1"
                     /translation="MAQIRKANGLVDWLDQRLAVHKLLDVLMVKYWIPKQINFLWAMG
                     VILTTLFAVLFVTGLLLVMYYKPDTALAFDSVNKTIMQEVDYGWLWRHMHGVAASVVF
                     LIIYIHMLTGIYYGSYKKGREMIWISGMLLFVVFSAEAFSGYMLPWGQMSYWAAQVIT
                     NLFGGIPFIGSELVIWIRGDYAVSDPTLTRFFMLHVCLLPIVIIAIIVFHFYSLRIPH
                     VNNEISEELDFDLEAEKYMAGDTKGSKVIPFWPGFLSKDFMYISFFMIFFFYLVCFKF
                     EFAMDPINFDPANALKTPEHIYPEWYFLWSYEVLRGFFFDIAGIKAFDIGLAAFGIAQ
                     VIFFLLPWLDRSDVVKPAHERPLFFIWFWILLIDLIVLTVYGKLPPTGVNAWVGFYAS
                     IVFLLLLIVVLPVITIMERKGAKQ"
     gene            6832..7956
                     /locus_tag="RTF91_001446"
     CDS             6832..7956
                     /locus_tag="RTF91_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDZ4944313.1"
                     /translation="MREIKIFSVVVVFTALVYWGVEPYAHSVMKPHVAPANFDFAVED
                     TTFAKGMVETKELTLKDAQVSGDAKRIESASKELEKAKEELSKIETLWADVAKIDFAK
                     GDAKKGKEFFENNCFACHGIKEDGIAANITDSSMGVIPPDLSSAGAIFDEKFLAALIM
                     HPALALKMDHKFGDAFIMTAYNKETSGESEEVTNANIANVIAYLKDVSIKFEANEDTV
                     IKKDVEAKYAKMENSSQKIALMEKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQND
                     LKTYLGSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVGLTEAAQAKVISYIE
                     QVGDSKKEERKTTGIYIMIFFVILSIFAIGWKRSVWSKLH"
BASE COUNT         2785 a          990 c         1456 g         2823 t
ORIGIN      
        1 taattctgtc ataattgatt tattttgttt tatttaggat gttttaaaca tgaaagaaat
       61 agttttatct gaggatgctt taattacctc taaaacagac cttaagggga atattattta
      121 tgctaataat gattttttaa aatatgcagg ttataaagtt gatgaacttt tgtataaacc
      181 tcataatata gtaagacatg aagatatgcc acgcactgta tttaaatgtc tttgggactc
      241 tattcaaaaa ggggatgaaa tttttgcatt tgtgaaaaat aaagctaagg atggtagttt
      301 ttattgggtt tttgcaaatg taactgcctc ttttgatgct aatggaaata ttattaatta
      361 ttattccgtt cgtcgtgcac ctaatagaaa atcaatttct acaatcgaaa gtgtttataa
      421 aattttactt gaaaaagagc aaaaattggg tattaatgct ggagtttcag ctttgataga
      481 tattgtaagc tcttataaaa caacttataa tgaactcatt tttagtttac aaaaagataa
      541 ctaattaaga taatatttat cttttttgtc atataattcg ctttcaattt aaattttaaa
      601 gtaatatatt atttaaaaat tactttgatt tatgatttca gaatttttta acaaaaggaa
      661 agtaaatttt ataatgaaat atggattatt atcgactatt tttctaagta ttatcggtgt
      721 tttaggtatc atttttattc atttttatgt tggagtgata atttttattt taattactac
      781 attaatgatt tatttacttg agcaatataa agatgagcaa ataatgatag ataagttttt
      841 atttctttct agagagttaa aagagggtaa ttttgataat aggattatct atataaaaac
      901 aaagaataaa aaattagctg aaatagcgga taatcttaat aatactattg atggattaga
      961 agcatattta agagagatta atacttccat ttcttgttct caaaaaggtg aattttatcg
     1021 caaagcttta cctgaaggtt taaaaggaat ttttgctcat aatattgaat ttatcaataa
     1081 ggctttggca aatatagaaa ttactgcaag atctactttt aaaaatgctt tatcaagaac
     1141 tctgatggat ttaagtcttg gaaatcaaaa taaagatatg tctcaaattt ctaactcatt
     1201 aaatcaagat attagcatga tgaaaaatgt atacgataca gttggtgcaa tcactcatac
     1261 agctacagaa aatgcttcag aggtaaattc tttacaaaat gctatgggat ctttaatgga
     1321 tgttgtaaat tcaagtaaag aaacagtcca aacttttgta gtaaattcac aaaatataag
     1381 ttcagtagtg gaagttatac gcgatatagc tgatcaaatc aatcttttag ctcttaatgc
     1441 cgctatagaa gctgctcgtg caggtgaaca tgggcgtggt tttgctgttg ttgctgatga
     1501 ggtaagaaaa ctagctgaaa gaacccagcg atccacaagt gaaatttcta ttgcagttca
     1561 gactatgcaa caagattttg taaatattca aagtggtagt gaacaagttt ttaatattgt
     1621 tagtgaatct gaagaaagaa ttaataaatt ttctcaagct tttaaacgct tagaagaaaa
     1681 tagtagtgca cttggtgtta attttggatc ttttgtaaaa agattaattt tatctatagt
     1741 taaaatagat catattcttt ataaatcaaa tatatattta aatttaaatg ggactcaaaa
     1801 ttttaatctt gaaagcgtag atccaatttc taatctttgt caagatgaga tagctcaagg
     1861 tgttatcaat gagcttagtt ctgaaactga gttgaatttg gctaaagaat ttataaaaaa
     1921 taatgctaaa aaagcaatag aagaatcaaa tcaagattat attgatcaaa aagcttatga
     1981 tacgattgta aatgatatca aatcactaga aaaaagaagt gctgaaattt tagccaaatt
     2041 aaaaatataa actaagggtg gaaaaatgtc aagagaaatt tttttacaaa aagatagttt
     2101 aattacttct aagacagatt taaaagggaa aatagtttat gcaaatcatg atttcttaaa
     2161 atacgcaggt tatactatgg gtgaagtatt aaacaaacct cataatatag taagacatga
     2221 agatatgcca aaaactgttt ttaaatattt atgggattat atgagagaag gtaaagaaat
     2281 ttttgcttat gtaaaaaata aaactaaaga taacagttac tactgggttt ttgcaaatgt
     2341 aactccatca atagatatta ataataatat tataggttat tattctgttc gtcgtatgcc
     2401 aaataaaaat gctatttcca aagtggaaag cctttataac gatcttttaa aaatagaaca
     2461 gcaacaaggc ttaaacaagg gtgttgagat gcttaaaaat ttctgtaaag atacaggtaa
     2521 aacttacaat gagttgattt tctctcttca agaagctaaa taaatttttg ttagacttaa
     2581 aacgagtttg ttttaagtct agatattata taatctttct tttaaaattc acatttttca
     2641 aggcaaaata tgtttgatgt cattgttata ggtggtggac atgcaggtgt tgaagcaagt
     2701 gctgctgctg ctagaatggg caaaaaaact ttacttttaa ctacattgat tgagcaaata
     2761 ggagcagcaa gttgtaatcc agctataggt ggacttgcca aagggcattt ggtaaaagaa
     2821 cttgatgcta ttggtggtct tatgggcgaa attactgatg aagcagggat acaatttcgc
     2881 attttaaatg aaagtaaggg tatagctgtt caaggaagta gagcgcaaat tgatatggat
     2941 aaataccgta ttattgcacg taataaactt ttaaaacttt caaatttaga aatttctcaa
     3001 gaacaagcaa gtactttgat tatagaaaat gatgaagtta aaggtgtaaa aacaaattta
     3061 gaaaatacat attttgccaa aaaagttata cttacaacag gaactttttt aaatggactt
     3121 attcatgtgg gtgaaaataa acttcaagca ggaagagtag gggagcttgc ttcagttaat
     3181 ttgggaaatt atttacagac tttagatttg aaaatgggac gtttaaaaac aggaacttgt
     3241 ccaagagtag atgctaaaag tattgatttt agtgtgcttg aaattcaaga tggcgatgta
     3301 aatcctaaag cttttagttt tcgttcgaga aattttaatc ccactcaact tccttgctat
     3361 atcgcacgca ctaatactac tacacatgag atcattaaga gcaattttta tcgtgctcca
     3421 ctttttacag gacagattga aggtgtgggg ccaagatatt gtccttctat agaagataag
     3481 attaatcgtt ttagcgacaa agaaagccac catcttttta tagaacctca aactatcgat
     3541 gcaacggagt attatattaa tggtttttct acttctttgc cttatgaggt gcaagctcaa
     3601 atgttgcatt ctataaaagg ttttgaaaat gctaaaatca cgcgttttgg ttatgctata
     3661 gagtatgatt atatagagcc aaccgagtta aagcatactt tagagcttaa aaagattaaa
     3721 aatctttatt gtgcaggaca gattaacgga actacgggtt atgaagaagc tgcagcacaa
     3781 ggccttatgg caggaatcaa tgcaagttta agcatagata caaaagaacc tttgatttta
     3841 agacgtgatg aagcttatat aggggtttta atcgatgatt tagtggtaaa aggtacgaaa
     3901 gagccttata gaatgtttac ttcaagagcg gaatttagac tatttttaag agaagaaaat
     3961 gctatactta gacttggaaa atatggctat gatttagggc ttttaagtga gcaagatttt
     4021 gcttatatac aaaatatcgc aaacaatctt caaaaaggac ttgaattttt actttctaaa
     4081 aaattcacac ccaataatca aaataatgct tttttagaga gtttaggaga agataaaatt
     4141 tcttctatag ttaatcttca aaaaattgtt gcaagagcaa gttttaatgt agagaaatta
     4201 aaaaaactta atcctatgtt tgaagctatg gataattact ctttaagaga aattttaaat
     4261 gaggcaaagt attatcatta tatcagtatg caaaaagctc aagtagaaaa aatgaaaaat
     4321 cttagtgaac ttaaaattcc tgagaatttt gattttaaaa gtgtaagcgg tttaagcaat
     4381 gaggttatag aaaagctcaa tcatcataaa cccccaacta tttttgctgc aagtcaaatc
     4441 agtggaatta ctcctgcagc gttagacatt ttacaaattt atatcaaaat gcaaaagaag
     4501 aaagcttaaa cgcttacttc ttttatcttt ttatctactt tgattttact tttttgacgt
     4561 ccattagaat ttgtctattt tctagtttag aagctttagg gtttttcaat tttatcgcga
     4621 gtaaaatttt acattttttt agagaaaaaa cgaagaaaat ttatatcagc acaaaaaaat
     4681 gatgtttttt gctaacgatg gagtgatttt aatcattact ctatttaaag atcgtaaaat
     4741 cttaagttct tttttgctta gtctttcttt atttatgtga tgcaagttta aatgctttag
     4801 ttaactaata ttatcactgt aaattatttt aaaatagaac ttttagaatt tattaaaaat
     4861 atgttttacc aaatttattc gttatttatt cgttttgctt tggagttttg gctagaaaag
     4921 gtatggaaat ttctttttta cgggtattag cacctgtgtt tgttttttct ttttttgccc
     4981 ttgtttataa atatcaaaat ttattaaaca aagaaaaaat ttattttaat ttcgataaac
     5041 ttttaactta gttaaaaaat aaaattgaaa ggacaagtta tggctacatc tgagagtaga
     5101 cgaagcttta tgggttttgc atttggaagc gtagctgctg taggcggtgt tttctcgctt
     5161 gttgcgatga aaaaaacttg ggatccgctt ccaagtgtca aagctgcagg ttttactaca
     5221 gtggatttat ctggaatgca ggatggagag cttagaacta tagaatggcg taaaaagcct
     5281 atttttatat taaaaaaaga tgcgagtatg ccaaaagatg agaaacgaga tgttgtggta
     5341 gataacgcag cttatactgt ggttatagga ctttgtacac atttgggttg tatacctgct
     5401 taccaaccaa gcgagcaatt gtttaaatgc gcctgtcatg gtggagaatt tgatataagc
     5461 ggaaaaaatg tttttggacc tcctccaaag cctcttgaaa ttcctccttt taaaatcgat
     5521 ggaaccaagc ttgttttagg cgaagagggt cctgaatata aaaaaatgat agcggaggct
     5581 taagatggca caaattagaa aagctaatgg ccttgtagat tggcttgatc aaagacttgc
     5641 agtgcataaa ctgcttgatg ttttaatggt aaagtattgg ataccaaaac aaatcaattt
     5701 tctttgggca atgggagtta tcttaaccac tctttttgca gtactttttg ttacaggact
     5761 tttgcttgta atgtattata agccagatac tgcacttgca tttgatagtg taaataagac
     5821 tattatgcaa gaagtggatt atggatggct ttggcgtcat atgcatggtg ttgctgcttc
     5881 tgttgtattt ttgattatat atatacatat gctaacggga atttattacg gttcttataa
     5941 aaaaggtcgt gagatgattt ggattagtgg tatgctttta tttgttgtat tttctgctga
     6001 agcttttagt ggatatatgc ttccttgggg gcaaatgagt tattgggcgg ctcaagtaat
     6061 tactaatctt tttggtggaa ttccatttat tggttctgag cttgtgattt ggattcgtgg
     6121 agattatgca gtttctgatc caactttaac aagatttttc atgcttcatg tgtgtttgct
     6181 ccctatagtt attattgcta ttatagtatt tcacttctat tctttaagaa ttcctcatgt
     6241 taataatgaa atttctgaag aacttgactt tgatttagaa gctgaaaagt acatggcagg
     6301 tgatacaaaa ggttctaaag tgattccttt ttggccagga tttttatcga aagattttat
     6361 gtatataagc ttttttatga tttttttctt ttatttggta tgttttaaat ttgaatttgc
     6421 aatggatcca attaattttg atccagctaa tgcacttaaa acacccgaac atatttatcc
     6481 tgagtggtat ttcttgtgga gttatgaagt tttaagagga tttttctttg atattgcagg
     6541 gattaaagcg tttgatatag gtttggctgc atttggtatt gctcaagtga ttttcttctt
     6601 acttccttgg cttgatagaa gcgatgtggt aaaaccagct catgaaagac ctttattttt
     6661 catttggttt tggatattgc ttattgattt aattgtttta actgtttatg gaaaattacc
     6721 tccaacaggt gtaaatgctt gggtaggatt ttatgcttct atagtatttt tacttttact
     6781 tattgtggtt ttaccagtta ttactattat ggagagaaaa ggagctaaac aatgagagaa
     6841 ataaaaatat tttcagttgt agtagttttt accgcgcttg tatattgggg ggtagagcct
     6901 tatgctcatt cagtgatgaa gcctcatgtt gctcctgcaa attttgattt tgctgtagaa
     6961 gatactacct ttgcaaaggg tatggttgaa actaaagaat taactctaaa agacgcacag
     7021 gtttcaggtg atgctaaaag aatagagagt gcaagtaaag aacttgaaaa ggcaaaagaa
     7081 gaattaagca agattgaaac gctttgggca gatgttgcaa agattgattt tgctaaaggt
     7141 gatgcaaaaa aaggtaaaga attttttgaa aataattgtt ttgcatgtca tggtataaaa
     7201 gaagatggga tagcggctaa tattactgat tcttctatgg gtgtaatacc accagatctt
     7261 agttcagcgg gtgctatttt tgatgaaaaa tttttagcag ctttgataat gcatcctgca
     7321 cttgctttaa aaatggatca taaatttggc gatgctttca tcatgacagc ttacaataaa
     7381 gaaacttcag gggaaagcga agaggttaca aatgcaaata tagccaatgt aattgcctac
     7441 cttaaagatg tgagcattaa atttgaagcc aatgaagata ctgttattaa aaaagatgtt
     7501 gaagcaaaat atgccaaaat ggagaatagt tctcaaaaaa tagccttgat ggaaaaagat
     7561 ataaaatttg ctaaagacaa agcaactttt atcgaagctt gtgggcgttg tcatgatatg
     7621 aaatatgata gctttttcac tccatcaaat caaaatgatt taaaaactta tttaggttct
     7681 gttccacctg atctttctat gatgataaga tctcgcggtg agcaatattt gcatgatttt
     7741 attaacaaca ctcaaaaact tcttccagga actgctatgc caagagtagg tttaacagaa
     7801 gctgcgcaag ctaaggttat atcttacatt gaacaagtgg gtgatagtaa aaaagaagaa
     7861 agaaaaacta caggaattta tataatgata ttctttgtaa ttttaagtat ttttgctata
     7921 ggttggaagc gttctgtttg gtctaaactt cattaatttt tatgtttcgc tatatttaaa
     7981 atagcgaaac agtttatatt ttaatcccga ttttattaaa atttaattat aaacaaagat
     8041 atattgatta ataa
//
LOCUS       DAPWAA010000066         7920 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.066, whole genome shotgun sequence.
ACCESSION   DAPWAA010000066 DAPWAA010000000
VERSION     DAPWAA010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7920
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.066"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(135..893)
                     /gene="map"
                     /locus_tag="RTF91_001447"
     CDS             complement(135..893)
                     /gene="map"
                     /locus_tag="RTF91_001447"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDZ4944314.1"
                     /translation="MIELKKPDEIEKLRIANQIVAKTLNFLENEIKIGMSLKQIDKMA
                     EDYILSLDAKPSFKGLYGFPGAICTSLNQVCIHGIPDDKIIKEGDILGLDVGSLIDGY
                     YGDAARTIAIGEVSATDEALISCAKDALYYAIDIIYEGMRFKELSAALGEFIHTRGFV
                     PLRGYCGHGIGRKPHGEPEILNYLEKGASAKSGPKIKNGMVFCIEPMICQKDGTPKHY
                     NGKWDAGSADGLNASHYEHCVAVINGRAEILSVV"
     gene            complement(903..1646)
                     /locus_tag="RTF91_001448"
     CDS             complement(903..1646)
                     /locus_tag="RTF91_001448"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDZ4944315.1"
                     /translation="MKIGVFDSGVGGISVLKSLYEARLFDEIIYYGDTARVPYGVKDK
                     DTIIKFCLEALEFFKQFQIDMLIIACNTASAYALDALRSKAHFPIYGVIDAGVKSTIK
                     TLPDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQ
                     SAMEYYFKNITVPDALILACTHFPLLGCSLSKYFGDKTKLIHSGDAIVEFLKERENIS
                     SKNYKAKLHFYASSDVESLKNTAKIWLDL"
     gene            complement(1648..2109)
                     /locus_tag="RTF91_001449"
     CDS             complement(1648..2109)
                     /locus_tag="RTF91_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDZ4944316.1"
                     /translation="MRHIFFIIAIIFFINGCSFYQNLNSTHPIYNTSKETKLKTIANE
                     WKKTPYVLGGTSKRGADCSGFTQSALAQLNIHIPRTTKTQLGSGRKISKSKLQAGDLV
                     FFKTGRGPNGMHVGIYTSQGKFIHLSTKGGVKEVELNTSYWKARYIGARRY"
     gene            complement(2118..3287)
                     /gene="nhaA"
                     /locus_tag="RTF91_001450"
     CDS             complement(2118..3287)
                     /gene="nhaA"
                     /locus_tag="RTF91_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDZ4944317.1"
                     /translation="MNNVIIKLKTLILNEAFGGVLLIVCTLLALLVQNGSFSEYYREF
                     LNLKVGFSVGEFELNKPFLLWINDGLISIFFFAIGLELKREFLHGDFKNPKNIVLPFM
                     AALGGILIPAMLFALVNIGDAYTLKGWAIPTATDTAFALAILMMCGKHIPSSLKIFLL
                     SLAIFDDVGAILIIAIFYTTKLSIVAFVVAGIAILVMFVLNLLGITRKSFYFICSVIL
                     WISVLKSGVHATLAGIITAFFIPMQTKNGEAFLEEIHESLKFWLAFVILPLFAFANAG
                     VNLSNIDIGAVFSGVSIGIFLGLFVGKQVGVFLFSYLAIRFKFAALPQGSDLKQLYGV
                     CILTGIGFTMSLFIDGLAYEVSDVFNYADNLAILIASFCSGIWGFIYLKFFATRS"
     gene            complement(3284..4432)
                     /gene="nhaA"
                     /locus_tag="RTF91_001451"
     CDS             complement(3284..4432)
                     /gene="nhaA"
                     /locus_tag="RTF91_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDZ4944318.1"
                     /translation="MQMIKKMVLNETFPGILLIFFTFLALLCKNSSLSVIYTDFFNAN
                     FTVGFDHFQISKSLDLWINDGLIAIFFLCIGLELKYEILRGQLKNIRAVSLPIFGALG
                     GMIIPALIFAVINYSHDFAMKGWAIPTATDIAFAVGILMLLGNKIPTSLKLFLLSLAI
                     FDDLGAIVIIALFYTDQLSALAIIICLFCVFALLLLNYYHITHLSLYVLVGVVLWIAM
                     LKSGVHATLAGVIISLFIPLDTKNKKPYLHEVLKDLNPWVIYFILPLFAFANAGIDIR
                     DMDLGSVFSPVSLGIILGLFLGKQLGVFTFCFIAIKLKLAKLPENIKYGKFYGICILA
                     GIGFTMSLFIDGLAYKNSDIFEYADRLAILIASFLSAIVGFIYLKIVK"
     gene            complement(4574..4756)
                     /locus_tag="RTF91_001452"
     CDS             complement(4574..4756)
                     /locus_tag="RTF91_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfB family protein"
                     /protein_id="HDZ4944319.1"
                     /translation="MVSDVSMGNANLMTAVNTSVLKKSMDTNEALMSELIEGMEGASQ
                     ASTPQASSSSGLDIYA"
     gene            5055..7148
                     /locus_tag="RTF91_001453"
     CDS             5055..7148
                     /locus_tag="RTF91_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HDZ4944320.1"
                     /translation="MKICKIIFFIISIFLVSSAFARVDDYINEANLIKDMLRQSIETY
                     KKGDNLGAKKLSEDAYFQHFENMEGPIGRNIGRKAITMERKFVNLRRMYKDEAPLTQI
                     NALIDSLYYDLDEVAPILQNGYRLKAKASDTNYDKTKAEKSSLEANAKRESDAEALIA
                     QMMGVDKKDLAQSSSTTQTPDTPTNNGTSKLTDDNASADLQAAAAMDVRLQFILDNIS
                     TKFLEAANAFKEKNYQQSKDFLNDALFSDYRNTKVEILVNKFTKAGNDQKIQQAIRTL
                     IRQINDTKIDEKSLRDSLDNIEEQIFDVFLQIPNSELSNLKISGFNDETKGKDYAKVS
                     DDIKLALDRILKNYDGFSASIVDDLQGIYLDIFEASGMENKIGAVDSGLKLKIESLFS
                     KGVALIKANAGKKELETTFNDLEQLITSSVDKIQDSTPYSLFVWALGIIIREGLEALI
                     IVVAIVSYLVQSGNKNRLNIAYSALFTGVILSFITAFGVSWLFKENAGQSRELIEGVT
                     MLIAVFLLFYVGFWLLSNAQNKKWASFIKQGAIDAISNNSAKTLWITVFLAVYREGTE
                     TVLFYQALFFDAKTSTDFSAVFGGLGLGILILIILYFLLKAGAIRIPIKQFFYITSYI
                     IFYMVFVFTGKGIAELIEGKVIIPSLISINFEPILWLGIYPYYETLIPQFIVLILLTI
                     GILITKQISKKGVKS"
     gene            7145..7684
                     /locus_tag="RTF91_001454"
     CDS             7145..7684
                     /locus_tag="RTF91_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HDZ4944321.1"
                     /translation="MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQP
                     IEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKR
                     GTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVG
                     KWFEPFKVDYKFKYTGTPK"
     gene            7768..>7920
                     /locus_tag="RTF91_001455"
     CDS             7768..>7920
                     /locus_tag="RTF91_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2318 domain-containing protein"
                     /protein_id="HDZ4944322.1"
                     /translation="MSIYFVHFLISVLPLSILMAFITPNKKYIFKSFLVVFLGFLFGY
                     FAFFIAA"
BASE COUNT         2970 a         1334 c         1086 g         2530 t
ORIGIN      
        1 tattctaaaa aaacttaaat gatactaaaa atattattta gtaacttaaa ttattaaaga
       61 attaatataa tattatttag aaaattttaa atttttaaga atttaagaaa aaatattatt
      121 tttgtaattt aatattatac tacagaaaga atttcagcac gcccattaat cacggcaaca
      181 caatgttcat aatgactcgc attaagtcca tcagcacttc cagcatccca tttgccatta
      241 taatgctttg gggttccatc tttttgacat atcataggtt ctatacaaaa aaccattcca
      301 tttttaattt ttggaccact ttttgcactc gcaccttttt ctaaatagtt taaaatttca
      361 ggttctccat gaggtttgcg tcctatgcca tgtccacaat atccacgaag cggtacaaaa
      421 cctcttgtat gaataaattc acccaaagca gccgaaagtt ccttaaaacg cattccttca
      481 taaataatat ctatagcata atataaagca tctttagcac aagagatcaa agcttcatca
      541 gtagctgaaa cttctcctat agcaatagtt cttgctgcat ctccatagta tccatcgatc
      601 aaacttccca catcaagacc caaaatatca ccctctttga taattttatc atctggaatt
      661 ccatggatgc aaacttgatt taaagatgta caaatagcgc ctggaaagcc gtaaagtcct
      721 ttaaatgatg gtttagcatc aagacttaaa atataatctt cagccatttt atcaatttgc
      781 tttagactca ttcctatctt aatctcattc tctaaaaaat ttaaagtttt tgctacaatt
      841 tgatttgcta ttcttaattt ttctatttca tctggttttt ttaattctat cattttattt
      901 ccttataaat ctagccaaat tttagcagta ttttttaaag attcaacatc acttgaagca
      961 taaaaatgta attttgcttt ataatttttc gagcttatat tttctctttc tttaagaaat
     1021 tcaactatag catctcctga atgaattaat tttgttttat cgccaaaata cttacttaaa
     1081 gaacagccta gtaaaggaaa atgagtacaa gcaagtatca aagcatctgg aactgtaatg
     1141 tttttaaaat aatactccat ggcgctttgc aaaaaatctc cttcaaaaat accttcttca
     1201 accataggca caaaaagccc cgtagccaaa gcatttatat ttgtatatcc ttgggataac
     1261 aaacgctttt gatattcttc tgacttaatc gttgcttttg tagcaatgac taaaatttct
     1321 ttatttttat caggtaaagt ctttattgtt gatttaactc ctgcatcaat tacaccatat
     1381 atcggaaaat gtgcctttga tcttaaagca tccaaagcgt aagcactagc agtattgcac
     1441 gcaatgataa gcatatcaat ttgaaattgt ttaaaaaatt ctaatgcttc aagacaaaac
     1501 tttataatag tatctttatc ttttactcca taaggaactc ttgcagtatc tccataatag
     1561 ataatttcat caaaaagcct agcctcataa agagatttta aaacactaat cccccctact
     1621 ccactatcaa atacacctat tttcacttta ataccttctt gctcctatat aacgagcctt
     1681 ccaataagaa gtatttagct caacctcttt tactccgcct ttggtagata aatgtataaa
     1741 ttttccttga cttgtataaa taccaacatg cataccattt ggccctcttc ctgtcttgaa
     1801 aaataccaaa tcccctgctt gtaatttcga tttagaaatt tttcttccag aacctaattg
     1861 agtttttgta gtacgaggta tgtgtatatt aagctgagct aatgcactct gtgtaaatcc
     1921 tgaacaatca gcacctcttt tacttgttcc ccctaaaaca taaggggttt ttttccattc
     1981 gtttgcaata gtcttaagtt ttgtttcttt acttgtatta taaattggat gagtagaatt
     2041 taaattctga taaaaactac atccatttat aaaaaatata attgcaatga taaaaaaaat
     2101 atgtctcatc agtttcctta agatcgagta gcaaaaaatt taagataaat aaaaccccaa
     2161 attccagaac aaaatgaggc tataagaatg gccaaattat ccgcataatt aaaaacatca
     2221 ctgacttcat acgccaaacc atcgataaat aaactcatcg taaaaccaat gcctgtaagt
     2281 atacaaaccc cgtaaagttg ttttaaatct gaaccttgag gcaaagctgc aaatttaaag
     2341 cggatcgcca aataagaaaa taaaaataca cccacttgct tgcctacaaa aagacctaag
     2401 aaaataccta tgctcacgcc tgaaaaaact gccccaatat cgatattgga taaatttact
     2461 ccagcattag caaaagcaaa taaaggcaaa ataacaaaag caagccaaaa ttttagactt
     2521 tcatgaattt cttctaaaaa tgcttcccca tttttagttt gcatcggtat aaaaaatgct
     2581 gttataattc cagctaaagt tgcatgcaca ccacttttta aaacactaat ccaaagaata
     2641 actgaacaaa taaaataaaa agattttctt gttatcccta aaagatttaa aacaaacatt
     2701 actaaaatag caattcctgc aaccacaaaa gcaactattg ataattttgt cgtataaaaa
     2761 atagctataa ttaaaatagc gcccacatca tcaaaaatag ctaaagaaag taaaaaaatt
     2821 tttaaacttg atggaatatg cttaccacac atcattaaaa tcgctaaagc aaacgctgta
     2881 tccgtagctg taggtatagc ccaacctttt aaagtataag catctcctat atttactaaa
     2941 gcaaatagca tcgcaggtat aagtataccc cctaaggcag ccataaaagg caaaacaata
     3001 tttttaggat ttttaaagtc cccatgcaaa aattctctct taagttcaag tcctatagca
     3061 aagaaaaata tagatataag cccatcatta atccaaagta aaaaaggctt attaagctca
     3121 aattcaccga cactaaatcc aacttttaaa tttaaaaatt ctcgataata ttcgctaaaa
     3181 gatccatttt gcacaagcaa agcaagcaaa gtgcaaacta taagcaagac acctccaaaa
     3241 gcttcattta aaattaaagt ttttaattta ataattacat tattcattta acaatcttaa
     3301 gataaataaa gccaacaatg gcacttaaaa aactagctat taaaatagca agtctatccg
     3361 catattcaaa aatatcacta tttttatacg ccaaaccatc gataaataaa ctcatcgtaa
     3421 aaccaatgcc tgccaaaata caaatgccat aaaattttcc atatttaata ttttcgggta
     3481 attttgcaag cttaagttta atagcaataa aacaaaaagt gaaaacacct aattgttttc
     3541 ctaaaaataa tcctaaaata attccaagac tcacaggtga aaacacggaa ccaagatcca
     3601 tatctctaat gtcaattcca gcattagcaa aagcaaataa aggcaagata aaataaatca
     3661 cccaaggatt taaatcctta agaacctcat gtaaataagg ttttttattt tttgtatcaa
     3721 gtggtataaa taaagaaatg atcacaccag ccaaagttgc atgtacacca cttttaagca
     3781 tagctatcca caacacaaca cccaccaaca catataaaga aagatgggta atatgataat
     3841 aatttaataa aagcaaagca aatacacaaa acaaacaaat gataattgcc aaagctgaaa
     3901 gctgatctgt gtaaaataga gcaataatga caatagcgcc taaatcatca aaaatagcta
     3961 aagagagtaa aaaaagcttt aaacttgtag gaattttatt tcccaaaagc atcaaaatac
     4021 ccacagcaaa agctatatca gttgctgtag gtattgccca gcctttcata gcaaaatcat
     4081 gagaatagtt aataacagca aaaattaaag cagggataat catacctcct aaagccccaa
     4141 atataggtaa agatacagct cttatatttt taagctgtcc gcgtaaaatt tcatatttta
     4201 actcaagccc tatacataga aaaaagatag ctattaaacc atcgtttatc cacaaatcca
     4261 acgactttga aatttgaaaa tgatcaaatc ctactgtaaa attagcatta aaaaaatctg
     4321 tataaataac acttaaagaa gaatttttac ataacaaagc tagaaatgta aaaaatataa
     4381 gtaaaatacc ggggaaagtt tcatttaaaa ccatcttctt tatcatttgc atgcttaact
     4441 cctaaataat attataaaaa ttttatgata aataaaatga taagattata acgaaaaaat
     4501 actaaagaaa taattattta aaaaacaagc tcaagacgct aaagaaattc ttaagcttgt
     4561 ttttttaaga tatttaagcg taaatatcca agccactaga gctagaagct tgtggagtgg
     4621 aagcttgaga ggcaccttcc ataccttcga tgagctcgct catcaatgcc tcgtttgtat
     4681 ccatagattt tttcaaaact gaagtattaa cagcagtcat taaattagca ttacccatag
     4741 aaacatctga aaccataatc gtcctccttt tagtatagtc ttaaggcttc attaaatcgg
     4801 atgatatttt taaaacttaa tattttttgc taagcttttt aaaattttca aggaaactaa
     4861 tgtctaaagc agaaattcat aaaaatttac aatcatagaa acaataaata ttcattaaaa
     4921 tataattaat aaaaaatatt ctaaatataa aaacttattt tttagttcta tattaagatt
     4981 tttatattat actaaactat tattgatttt tgataataaa tattattttt atcaaaaata
     5041 aaggaataat gataatgaaa atttgtaaaa ttatattttt tattataagc atttttttag
     5101 taagctcagc ttttgctaga gtagatgatt atattaatga agcaaatctt atcaaagata
     5161 tgctaagaca aagcatagaa acttataaaa agggtgataa cctaggtgct aaaaagctta
     5221 gtgaagatgc gtatttccag cattttgaaa atatggaagg tcccatagga agaaatatag
     5281 gaagaaaagc catcactatg gaacgtaaat ttgtcaattt gcgtcgcatg tataaagatg
     5341 aagctccttt aacgcaaatt aatgctttaa ttgatagtct ttattatgat cttgatgaag
     5401 tagcaccaat tttacaaaat ggatatcgtt taaaagcaaa ggcaagcgat acaaactacg
     5461 ataagactaa agccgaaaaa tcaagcctag aagccaatgc caaacgcgaa tctgatgcag
     5521 aagctttaat cgcacaaatg atgggagtag ataaaaaaga tttagcacaa agctcttcaa
     5581 ccacccaaac tcccgataca cctacaaaca atggtacaag taaacttaca gatgacaatg
     5641 cgagtgctga tttacaagct gctgctgcaa tggatgtaag attgcaattt atactggata
     5701 atatctctac taaattttta gaagctgcca atgcttttaa ggaaaaaaac tatcaacaga
     5761 gtaaagattt tttaaacgat gctttattta gtgattatcg caacaccaag gtagaaattt
     5821 tagtaaataa atttaccaaa gcaggaaatg atcaaaaaat tcaacaagcc atacgcaccc
     5881 ttatacgcca aatcaatgat acaaaaatag atgaaaaaag cttaagagat agcttggata
     5941 atatagaaga gcaaattttt gatgtttttc tacaaattcc aaattcagaa ctttcaaatt
     6001 tgaaaatttc aggttttaac gatgaaacaa aaggtaagga ttatgctaaa gtttctgatg
     6061 atatcaagct tgccttagat agaattttaa aaaattatga tggctttagt gcttctatag
     6121 tagatgatct acaagggatt tatttagata tttttgaagc aagtggaatg gaaaataaaa
     6181 ttggtgccgt agatagtggc ttaaaactta aaatagaaag tttattttcc aaaggggtag
     6241 cactcattaa agcaaatgca ggcaaaaaag agcttgaaac cacctttaat gacttagagc
     6301 aactcataac aagtagcgtg gataaaattc aagattccac tccttattcg ctatttgtat
     6361 gggctttagg tattattatc cgtgaaggct tagaagcttt aattatcgtt gtagccattg
     6421 tttcatacct tgttcaaagc ggcaataaaa atcgtttaaa tatcgcctat agtgctcttt
     6481 ttacaggagt aattttaagt tttattaccg cttttggagt ttcttggctt ttcaaagaaa
     6541 atgcaggaca aagtagagag cttatagaag gtgttactat gcttatagct gtgtttttac
     6601 ttttttatgt gggcttttgg cttctttcaa acgcacaaaa taaaaaatgg gcaagcttta
     6661 tcaaacaagg tgccatagat gccatatcaa acaatagtgc aaaaaccctc tggataaccg
     6721 tatttttagc cgtttataga gaaggtacag aaacagtgct cttttatcaa gccttatttt
     6781 ttgatgctaa aacaagcact gattttagcg ctgtttttgg cggacttgga cttggaattt
     6841 taatacttat cattttatat tttcttttaa aagcaggagc tattcgtatc cctataaaac
     6901 aatttttcta tatcacctct tatattattt tttacatggt ttttgttttt acgggcaaag
     6961 gcatagctga acttatagaa ggaaaagtca tcattcctag tcttatatct ataaattttg
     7021 aaccgatttt atggcttgga atttatcctt actatgaaac cttaatccct caatttatag
     7081 ttttaatttt gctaactatt ggcattttaa taacaaaaca aatttcaaaa aaaggagtaa
     7141 aatcatgata aaaaaagttt tatcagtagt tgctgcagct gcagttatta gcacaaattt
     7201 atttgcaggc gaagtaccaa ttggcgatcc aaaagaatta aatggtatgg aaatagctgc
     7261 tgtttattta caacctattg aaatggaacc aagaggtatt gatttagccg cgtctttagc
     7321 agacattcac ttagaagcag atattcacgc acttaaaaat aatccaaatg gttttccaga
     7381 aggtttttgg atgccttatt taaccatagc ttatgaactt aaaaatacag acacaggcgc
     7441 cattaaacgt ggaaccttaa tgcctatggt agccgatgat ggtcctcact atggtgcaaa
     7501 tattgctatg gaaaaagata aaaaaggtgg ttttggcgta ggaaattatg aattaacttt
     7561 ttatatctca aatccggaaa agcaaggctt tggacgccat gttgatgaag aaacaggcgt
     7621 gggcaagtgg tttgaacctt ttaaagtaga ttataaattc aaatacacag gtacaccaaa
     7681 atgattttac actcggatat tccgagtgtt taaacatttt tatttttaat tttataaata
     7741 aaaataaaaa tgtttaaaga gtaaattatg agtatatatt ttgtgcattt tcttatcagt
     7801 gttttaccac taagtatttt gatggctttt atcactccta ataaaaaata tatttttaaa
     7861 agttttttag tagttttttt aggctttttg tttggatatt ttgctttttt tatcgcagca
//
LOCUS       DAPWAA010000067         7803 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.067, whole genome shotgun sequence.
ACCESSION   DAPWAA010000067 DAPWAA010000000
VERSION     DAPWAA010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7803)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7803)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7803
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.067"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(372..1535)
                     /locus_tag="RTF91_001456"
     CDS             complement(372..1535)
                     /locus_tag="RTF91_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944323.1"
                     /translation="MTINSVNPYQNLTLSNPLQNSSALNLIKDGKALNQERNENNLEQ
                     LSYIFNNTTSYASEFGFRTNEKGFFDKDLNKIANIPESYDINIKSVRSIAKELTRQDE
                     NLNYNKIDLPYLLNSYHSSLKSINSEFLQDDNAYLSRDVISKLLSGFSTDNGEFLGQI
                     SRIYNNQEEIDLALSNIINLNTLMLDNKITNFHFDKAIENTSSNEILKPYLTKNAEVS
                     KSGLLMNFIYHDIKTQNEKEFNFFMKPATLELSSHQNLQKILKGETDIEDYIKKENEK
                     KMSFDLYLYVNGIDKKTSTQDKLSVFFQQYINYQKDMDLKEFTNSSSIFQIYIDQNHN
                     DFDNLKKQYQSQDTQRLEEANQLRFSSIENFLDRRQKQANINKILNSYMSVMI"
     gene            1692..1883
                     /gene="rpmI"
                     /locus_tag="RTF91_001457"
     CDS             1692..1883
                     /gene="rpmI"
                     /locus_tag="RTF91_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDZ4944324.1"
                     /translation="MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRDLR
                     TAKYVHSTNIKAVEKMLGI"
     gene            1978..2331
                     /gene="rplT"
                     /locus_tag="RTF91_001458"
     CDS             1978..2331
                     /gene="rplT"
                     /locus_tag="RTF91_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDZ4944325.1"
                     /translation="MARVKTGVVRRRRHKKILKLARGFYSGRRKHFRKAKEQLERSLV
                     YAYRDRRRKKRDFRRLWIVRINAACRLNNLSYSRFINGLKKAGIELDRKILADLAMND
                     AAAFAKIAEAAKKAL"
     gene            3139..4002
                     /gene="cheP"
                     /locus_tag="RTF91_001459"
     CDS             3139..4002
                     /gene="cheP"
                     /locus_tag="RTF91_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheP"
                     /protein_id="HDZ4944326.1"
                     /translation="MIGDMNELLLKSVEVLPPLPDTVSKLRKYVSEANSNIETMKVVE
                     IISSDPLMTAKLLQLANSPYYGFTREITTISQVITLLGIGNIINIVTADSIRDNFKID
                     VSPYGLDTKNFLKTCNEEATFITNWLNDEDKKLSFLLVPCAMLLRLGIVIFSNFLIQN
                     HKDKDFLAFLNKTKNENIALAENEFLGVDHISFLGFLLYHWNFDDILIESICFVRTPH
                     AAREEVKKSAYALAITDHLFAPHDGSSPFNTKAAIALLEEAKTQGINFDLNNLLSKLP
                     SKAKENLDKED"
     gene            4036..4512
                     /gene="cheQ"
                     /locus_tag="RTF91_001460"
     CDS             4036..4512
                     /gene="cheQ"
                     /locus_tag="RTF91_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheQ"
                     /protein_id="HDZ4944327.1"
                     /translation="MKSLILPPNEFLDHYILNAQFHRFAGISKNAYKFWKNVEIGRYQ
                     GTRIIFLHRNCILEKHQQALRQCSSLSGFVLASAFCSFTGLAPSHLVEKNNSSIYKLL
                     ELKEICGIKFINLRKFYDFLGLNYDQYIYIEKCHFFSPAPFEKRIKITESMCVGYY"
     gene            complement(4481..5791)
                     /locus_tag="RTF91_001461"
     CDS             complement(4481..5791)
                     /locus_tag="RTF91_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ4944328.1"
                     /translation="MDKTLNRRDIKVLALSSLGGTLEFYDFIIFVFFANYISTNFFPK
                     DLSSFWQMFNTYGIFAAGYLARPLGGVILAHFGDKFGRKRMFMISILLMVIPTFTLAF
                     IPNYESIGFICIVLLVFIRICQGIAIGGELPGAWVFIYEHAPQGQKRTYLGILTASVV
                     GGILLGSLVFLIMNKIYTQEELHEWAWRIPFFLGGIFGIISAYLRKFLRETPVFEQMK
                     KDKALEKFPLKEVFKKAKMGIALSMMITWVLTGCIVVMILLMPSYITKILQINTSLQT
                     YLQMGGILILCLGCIVSGILADKIGIIKSCVFFSIFFGIASLLYFNTLYMQNADFNLV
                     AYLYLFVCFFSGVMNFCPLIMNEVFDAKIKFSGLSFSYNIAYAIAGGLTPQLAFFLHS
                     FALDNLNNFWRFSLGIYVFILAIIALLCAFIFFYLNNTQRTYSQ"
     gene            complement(5794..5943)
                     /locus_tag="RTF91_001462"
     CDS             complement(5794..5943)
                     /locus_tag="RTF91_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HDZ4944329.1"
                     /translation="MTYEEDLNYHDYENEDEEYPQNHHKNYNYDDDDYEYDDDNNDDD
                     FYEMD"
     gene            6036..6509
                     /gene="moaC"
                     /locus_tag="RTF91_001463"
     CDS             6036..6509
                     /gene="moaC"
                     /locus_tag="RTF91_001463"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDZ4944330.1"
                     /translation="MKLSHLDEKNHPKMVDVSDKNITSRIAIASGMIYMSQEAFDAIR
                     NNTAKKGPVLQTAIVAAIIGAKKTSEIIPMCHPLMISKVETDIVEFVKECAFKLIVTV
                     KCEGKTGVEMEALSGVSIGLLTIYDMIKAIDKSMRITDIVLESKEGGKSGKFVRS"
     gene            6487..6750
                     /locus_tag="RTF91_001464"
     CDS             6487..6750
                     /locus_tag="RTF91_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 domain-containing protein"
                     /protein_id="HDZ4944331.1"
                     /translation="MVNLCDLEKEPEINYPTFWDYKVIFEVHVKANEIFKEILGQREY
                     KFEHSNSSTNGKYQSYLLNVYVDSKKDRLDIFDKLKAKAKFVL"
     gene            6740..>7803
                     /locus_tag="RTF91_001465"
     CDS             6740..>7803
                     /locus_tag="RTF91_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944332.1"
                     /translation="MYFKKEGKMKNTLIIFENSLSNLGKDEARDLLEDLSFNLAYKQI
                     SHNPHETKKVLNSLLVEFLTILKKLDFFNDENVTKVIKALVKASIVDAQNSLYDYINE
                     AELLNKQIENQKNLIKNQISDNFFEFENILQECSFCDEFSGGLNDAILFDIEMLGILK
                     ETAESAFLTTLEKAEDIELTSSEITKNLVYNAICEAHFEKERILKISSIILNTAFEIA
                     NESMAYAKDLCLGVIKGTRDGIVLAMEKFKTSLTYANFEEDVSLKSKELIGIEDDFIA
                     LLKKEIQAQSDPCKSIVENLLEHELDNLFAKFRRLAGESREQLILVLNDIKKNPKIND
                     FNKLTQNKLNRFKQEIFELE"
BASE COUNT         2873 a          974 c         1128 g         2828 t
ORIGIN      
        1 aaaatgtatt ttttaaattt tttcataata ttttattatt ttttaaatct tctttggttg
       61 tgtgtttaaa aataaaatct taaaccatga gatttaattt ttacccatat atatttaaat
      121 ttagctttat taatgataat ttcttcatca aaaagatgtt tattgatcat taacaataat
      181 tcttaaagca atttttaatt cttttgtttc aacatggtat tagttcatta aagagagttt
      241 tttaaaaatt tcaaaaagct ctttatattg atgatctaaa agatcattgt ccattgaaat
      301 aattttttca ctaaatcatg gttttgggta cttttatgca gattataatg ccataatact
      361 taaaatttat tttaaatcat cacggacata taagagttta aaattttatt tatatttgct
      421 tgtttttgac gacgatctag aaaattttct atagagctga agcgtaactg atttgcttct
      481 tctaatcttt gtgtatcttg actttgatat tgttttttaa gattatcaaa gtcattgtga
      541 ttttgatcaa tataaatttg aaatattgaa cttgaatttg taaattcttt taaatccata
      601 tctttttgat aattaatata ttgttgaaaa aatacagata atttgtcttg agtacttgtt
      661 tttttatcta taccattaac ataaaggtaa agatcaaaac tcatcttttt ttcattctct
      721 tttttaatat aatcttctat atctgtttca cctttgagaa ttttctgtaa attttgatga
      781 gagctaagtt ctaaagtagc gggtttcata aaaaagttaa attctttttc gttttgagtt
      841 tttatatcat gatagataaa attcattaaa agaccagatt ttgatacttc tgcatttttg
      901 gttaaatagg gttttaaaat ttcattagaa gaagtgtttt ctatggcttt atcaaagtga
      961 aaattagtta ttttattgtc tagcattaaa gtatttaaat ttatgatatt gcttaatgct
     1021 aaatcaattt cttcttggtt gttataaatt cttgaaattt gacctaaaaa ttccccatta
     1081 tctgttgaaa aacccgacaa tagttttgaa ataacatcgc gacttaaata agcattatca
     1141 tcttgtaaaa attctgaatt tatagatttt aatgaactat gatagctatt taaaagataa
     1201 ggtagatcta ttttgttata gtttaaattt tcatcttgtc ttgtaagttc ttttgctata
     1261 cttctaacac ttttaatatt aatatcataa gattctggta tattagcaat tttatttaaa
     1321 tctttatcaa aaaaaccttt ttcattggtt ctaaatccaa attcactagc ataactagta
     1381 gtattattaa aaatatagct taattgctct aaattatttt cattcctttc ctgatttaaa
     1441 gctttgccat ctttaattaa atttagagca gaactattct gtaaaggatt agataaagtt
     1501 aaattttgat atggatttac cgaatttata gtcattttaa atctttccaa aatattgctg
     1561 attttttata agcaaaagct gtgccaagtt ttttaaaaaa ttaaattcag tcaaaaatta
     1621 gaaaaaattt gatagtattt agcttttctt ttaatttgaa aaataaaaat ttatttaaat
     1681 aaggaaagcg tatgccaaag atgaaaagcg ttaaaagcgc agttaaacgc ttcaaagtag
     1741 gtaaaaacaa aatcaaaaga ggctcagctt ttagaagtca tattttgacc aaaaaacctg
     1801 caaaaagaat gcgtgatctt cgcacagcta aatatgtaca cagcacaaat ataaaagctg
     1861 ttgaaaaaat gctaggaatt taagtttttg acaaaagtca ttcaaactcc cctttttgag
     1921 ataaaatttc aagggcaagc tccaaatttg gacgccactt tatgaaagga aataaaaatg
     1981 gcaagagtaa aaacaggtgt tgtaagacgc cgcagacata aaaaaatttt aaaattagcg
     2041 cgtggttttt atagtgggcg ccgtaaacat tttagaaaag caaaagagca attagaaaga
     2101 agtctagtct atgcttatcg tgatagacgc cgtaaaaaaa gagacttccg tcgtctttgg
     2161 attgtacgta tcaatgctgc ttgtagactt aataatttaa gctattcaag atttatcaat
     2221 ggtcttaaaa aagcgggtat tgaacttgat agaaaaattc tagcagattt agctatgaat
     2281 gatgctgctg cttttgcaaa aatagcagag gctgcaaaaa aagcacttta atttttaact
     2341 aagaatttca aggtttttgc ttcttgaaat tcttaaattt tttagtactt ggttattagc
     2401 taaaacatct tcatagcatt taagttgatt tacatttttt caaaatcttt accgacatta
     2461 cttctttgtt taatttgtct gaaatttctt tacctaaaat ttataagatt tgaaatgatt
     2521 ttgaaaaatt cattagattt atcccttata aaattcattt cttgtactag agttaaagct
     2581 ttgcaatagg ttgtatagtt tgaatgactg ttttatagct ctttccattt cacttaagcc
     2641 catttggata ttttttgaaa gttttcaact tcattaaatt aaaacggtat ttaggcttaa
     2701 attgaacatg tatgttaaag tttgattttt taatatctct ttattataaa atataaattt
     2761 ccactaaagt ccatatttgc gctagattta tccctgttaa agcacaaggg taaggattgt
     2821 gtttatataa aagttctaaa agcaagcttt tactttgacc taaaccgcca taaattaaat
     2881 atgcaaagta tttgcacagt gcgatttaac aaggtatatt ttatagataa aatttctttt
     2941 tattgaggtt ttatttttaa aattaaaaaa catcaattta actccattaa aattattttt
     3001 taattgctag ttaattaaat caaaatacta taaattcggt atttatttat aatttttatt
     3061 atagcttaag taataaataa atgaaaattt agatataatt gcaaattata ataatcattg
     3121 acaaggataa atcaaattat gattggagat atgaatgagc ttttgttaaa aagcgttgaa
     3181 gtgttgccac ctttacccga tactgtaagc aaattaagaa aatatgtgag cgaggctaat
     3241 tcaaatatag aaactatgaa agttgttgag attatttcaa gtgatccatt aatgacagct
     3301 aaacttttgc aattagcaaa ttctccttat tacggtttta caagggaaat tacaaccata
     3361 agtcaagtga ttactttatt aggtattggt aatattatta atatagtcac tgctgactct
     3421 attagagata attttaaaat agatgtttca ccttatggtt tggatactaa aaatttttta
     3481 aaaacttgca atgaagaggc aacttttatc acaaattggc ttaatgatga agataaaaaa
     3541 ctttcttttc ttttagttcc ttgtgctatg cttttaagac ttggaattgt tattttttca
     3601 aattttctta tacaaaatca taaagataag gattttttag cttttttaaa taaaactaaa
     3661 aatgaaaata ttgctttagc ggagaatgag tttttaggtg tagatcacat ttctttcttg
     3721 ggatttttgt tatatcattg gaattttgat gatatcttga ttgaaagtat atgttttgtt
     3781 cgcactcctc atgctgctcg tgaagaagta aaaaaatccg cttatgctct agcaataaca
     3841 gatcatcttt ttgctccaca tgatggttct tctccattta atacaaaagc tgcaattgct
     3901 ttacttgaag aggcaaaaac tcaaggaatt aattttgatt taaataatct tttatctaag
     3961 cttcctagta aagccaagga aaatctagat aaagaagatt aaagagcttt ttattaagag
     4021 gttctaattg tagcgatgaa aagtttaatt ttacccccca atgaattttt agatcactat
     4081 attttaaatg ctcaattcca tcgttttgct ggaatttcaa aaaatgctta taaattttgg
     4141 aaaaatgtag aaataggtag atatcaggga acaagaatta tatttttgca tagaaattgc
     4201 attttagaaa aacatcagca agctttaaga caatgtagta gtttaagtgg ttttgtattg
     4261 gcaagtgctt tttgttcttt taccggattg gcaccctctc atttagtaga aaaaaataat
     4321 tcttctattt ataaattatt agagcttaag gaaatttgtg ggattaaatt tattaaccta
     4381 aggaaatttt atgatttttt agggctaaat tatgatcagt atatttatat agaaaaatgc
     4441 cattttttta gccctgctcc ttttgaaaag cgtattaaaa ttactgagag tatgtgcgtt
     4501 gggtattatt aagataaaaa aagataaatg cacatagtaa agctataata gccaaaataa
     4561 aaacataaat tcccaaagaa aaacgccaaa aattatttaa gttatctaaa gcaaaactat
     4621 gtaagaaaaa agcaagttgt ggagttaagc ctccagctat ggcgtaagca atattatatg
     4681 aaaaagaaag tcctgaaaat ttaatttttg catcaaatac ttcattcatt attaaaggac
     4741 aaaaattcat tactccgcta aaaaagcata caaataaata taagtaagct accaagttaa
     4801 aatcagcatt ttgcatatat agagtattaa aataaagcaa gcttgcaatt ccaaaaaata
     4861 tactaaaaaa tacacaagat tttataatac ctattttatc tgctaaaatt ccacttacaa
     4921 tacaccctaa acaaagaatc aaaatcccac ccatttgaag ataggtttgt agcgaagtat
     4981 taatttgaag tatttttgtt atatagctag gcataagtaa aatcattaca acaatacagc
     5041 ctgttaaaac ccaagtaatc atcatagaaa gagcaattcc cattttagct tttttaaaca
     5101 cttcttttaa aggaaatttt tctaaagcct tatctttttt catttgttca aaaacagggg
     5161 tttctcttaa aaattttctc aaataagcag aaataatccc aaaaattccg cctaaaaaga
     5221 aaggaattct ccaagcccat tcatgaagtt cttcttgggt ataaatttta ttcataatta
     5281 aaaagactaa actgcctaat aaaattccac ctacaactga agcagttaaa attcctaaat
     5341 aagttctttt ttgtccttgt ggtgcatgtt catatataaa aacccaagct ccagggagtt
     5401 ccccacctat ggctatacct tgacaaatgc gtataaaaac taaaagcacg atacaaataa
     5461 aacctatgct ttcataattt ggaataaaag cgagggtaaa agttggaata accatcaata
     5521 aaatgctgat cataaacatt cttttgcgtc caaatttatc tccaaaatga gctagtatca
     5581 caccgcctaa aggacgcgct aaatatccag ctgcaaatat tccataagta ttaaacattt
     5641 gccaaaaact acttaaatct tttgggaaaa aatttgttga aatataattt gcaaaaaata
     5701 caaaaatgat aaaatcatag aattctaaag ttccacctaa tgatgaaagt gctaaaactt
     5761 ttatatctct tcgattaagg gttttatcca ttcttaatcc atctcgtaaa aatcatcatc
     5821 attgttatca tcatcgtatt cgtaatcatc gtcatcataa ttataatttt tatgatgatt
     5881 ttgtggatat tcctcatctt cattttcata atcatggtaa ttcaagtctt cttcataagt
     5941 cattgtttgc tccttaaata aaaatgcaaa gcttatttta tcttaaattt gtttggtttt
     6001 gctataattt ttataatttt ttaaaaggtg aatttatgaa attaagtcat ttagatgaaa
     6061 aaaatcatcc taaaatggta gatgtaagcg ataaaaatat tacttcaaga atagctatag
     6121 ctagtggtat gatatatatg agtcaagaag cttttgatgc aattagaaat aatactgcaa
     6181 aaaaaggccc tgttcttcaa acagctattg ttgcggctat aataggagct aaaaaaacaa
     6241 gcgaaattat tcctatgtgt catcctttga tgatttctaa ggttgaaaca gatattgtgg
     6301 aatttgttaa agaatgtgca tttaaactta ttgtaacagt taagtgtgaa ggtaaaacag
     6361 gggttgaaat ggaagcttta agtggagtaa gtatagggct tttaactata tatgatatga
     6421 ttaaagctat agataaatca atgagaatta cggatatagt acttgaaagc aaagaaggag
     6481 gtaaaagtgg taaatttgtg cgatcttgaa aaagaacctg aaatcaatta tcctactttt
     6541 tgggattata aggtgatttt tgaagtacat gttaaagcaa atgaaatttt taaagaaatt
     6601 ttaggtcaaa gagaatataa atttgaacat tctaattcaa gcacaaatgg aaaatatcaa
     6661 agttatttat taaatgttta tgttgatagt aaaaaagatc gtttggatat atttgataag
     6721 ttaaaagcta aagcgaaatt tgtactttaa gaaagaagga aaaatgaaaa acactttaat
     6781 tatttttgaa aattctttat caaatcttgg caaagatgag gcaagggatt tgcttgagga
     6841 tttgagtttc aatcttgcat ataagcaaat ttcacataat cctcatgaaa caaaaaaagt
     6901 tttaaattct cttttagttg aatttttgac tattttgaaa aaacttgatt tttttaatga
     6961 tgaaaatgtt accaaggtta ttaaagcttt ggttaaggcg agtattgtgg atgctcaaaa
     7021 ttcgctttat gattatatta acgaagctga attattaaat aaacaaattg aaaatcaaaa
     7081 gaatttgatt aaaaatcaaa tcagtgataa tttttttgaa tttgagaaca ttttgcaaga
     7141 atgttctttt tgtgatgaat ttagcggcgg tttaaatgat gctattttgt ttgatataga
     7201 aatgcttgga attttaaaag aaactgctga aagtgctttt ttaaccacat tagaaaaggc
     7261 tgaagatata gaacttacaa gtagtgaaat aactaaaaat cttgtataca atgccatttg
     7321 tgaagcccat tttgaaaaag aaagaatttt aaaaatttca agtattattt taaacactgc
     7381 ttttgaaata gctaatgaat ctatggctta tgcaaaagat ctttgtttag gtgtgattaa
     7441 aggcacaaga gatggcattg ttttggcgat ggaaaaattt aaaacttcat taacttatgc
     7501 caactttgaa gaagatgtga gtttaaaaag caaagaatta ataggcatag aagatgattt
     7561 tatcgctctt ttgaaaaaag aaattcaagc acaaagtgat ccttgtaaga gtatagttga
     7621 gaatttgtta gaacatgagc ttgataacct ttttgctaaa tttagacgtc ttgcgggtga
     7681 aagcagagaa caactgatat tagttttaaa tgatattaag aaaaatccaa agatcaatga
     7741 ttttaacaaa ctcactcaaa acaaattaaa tcgttttaaa caagaaattt ttgaattaga
     7801 aaa
//
LOCUS       DAPWAA010000068         7694 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.068, whole genome shotgun sequence.
ACCESSION   DAPWAA010000068 DAPWAA010000000
VERSION     DAPWAA010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7694
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.068"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            79..1266
                     /locus_tag="RTF91_001466"
     CDS             79..1266
                     /locus_tag="RTF91_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDZ4944333.1"
                     /translation="MTLIAILCLYTALLSWISYAQIRFLEKEKDKQAQILSEEDYQNA
                     ADIAIENEKFKLFSNFYNLIINIAWVGFGFLYLKELLILNNTRFENTLFLLSFLIITS
                     ILNLPLNIYESFVKDKAHGFSNITVKLFIKDTVKSLVLTLVFGFFILYALLFCYDFFG
                     AFWWIVAFIFAFCIVVIVNLIYPTLIAPIFNKMEKLDDENLLKKISSLMKQCGFNANG
                     VYVIDASKRDKRLNAYFGGLFKSKRVVLFDTLLKALNEKELLAVLGHELGHFVHKDII
                     KALFNSAITMFLLFFVFANLPEFVYLESHLEGVNGSVFALLFIFANIFSFLISPVLNA
                     LSRKNEFAADQHGAKITSKEDMKNALIALARENKAFIKTSKIYTFFYLSHPSISDRIK
                     ALS"
     gene            1263..2072
                     /locus_tag="RTF91_001467"
     CDS             1263..2072
                     /locus_tag="RTF91_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDZ4944334.1"
                     /translation="MTIKNALTKAKSSLKCYENEAAFILCEYLQKDKAWLFLNQDIKI
                     DHESYFQLIKRFKSGEPFEYIFEKVDFWGLKFKIKKGVLIPRYDSEILLFQILNLCKK
                     NTFNKILEIGFGSGILSIVLAKELGLKITACDINPKALELALENAKLHKVDHLINFKL
                     CNFKQIEENYDFIFSNPPYIKNSYPIDIWVQREPKEALFGGEKGYEILEEIIHFSIDK
                     KVKFLACEFGYDQKEVLEKILHQNNFTADFFKDEQGYNRAFIAKFTNIRYD"
     gene            2092..2562
                     /locus_tag="RTF91_001468"
     CDS             2092..2562
                     /locus_tag="RTF91_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HDZ4944335.1"
                     /translation="MKAINLFLLASIIGVELILGIVVAPTIFFPQNLIGEGVLSHFQS
                     GLMMTQIFIKMGYLLIFVSVINFLYEIYSLMKDKIKFQTKISKLMLSLLILILSLIFV
                     FYFTDNIIKLQNLGENATKTQEFVSMHNASEVVIKIILIMQVFLYFLSFKIVKK"
     gene            2599..3348
                     /gene="flaC"
                     /locus_tag="RTF91_001469"
     CDS             2599..3348
                     /gene="flaC"
                     /locus_tag="RTF91_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin C"
                     /protein_id="HDZ4944336.1"
                     /translation="MMISDATMMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLA
                     IADSLRSQSSTIDQGVANAYDAIGVLQIADASLTNISQSADKLNQLSVKMNNAALNDS
                     QKGMLRAEATRIQESINDSFNNATYNGKNVFQTMNFVVGNGTETTNLNPLATDELSID
                     NQDSITNFMDQLGSLRSEIGSGINAITSNINASVQNSINSKAAENNLLNNDIAKNVND
                     FNANYLKENATAFVAAQSNIQLQNKIANLLQ"
     gene            3385..4017
                     /locus_tag="RTF91_001470"
     CDS             3385..4017
                     /locus_tag="RTF91_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDZ4944337.1"
                     /translation="MTLEQILEKTKNIRLIAASKYVDASMVEKLFNQGVVEFGENQVQ
                     ALAQKKENLNEKKLNIKWHFIGTLQSNKINLLIKQKPILWHSCNGIKIAKAMDKRLDY
                     KLNTLLEINSANENSKSGLDPNQAIEEYLQIQEECPNLNLCGVMSIGSHSQDKENIIK
                     SFETTFKIYEILQKHGAKICSMGMSNDFEIAIKCGSNLVRLGSILFKNLK"
     gene            complement(4033..7635)
                     /gene="dnaE"
                     /locus_tag="RTF91_001471"
     CDS             complement(4033..7635)
                     /gene="dnaE"
                     /locus_tag="RTF91_001471"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDZ4944338.1"
                     /translation="MSQFTHLHLHTEYSLLDGANKLKELALTLKEQGATSVAMTDHGN
                     MFGAIDFYQTMKAQGLKPIIGIEAYLHNHDELDDKSSRQRFHLCLYAKNEIGYQNLMY
                     LSSQSYIKGLYYYPRINKKLLEEYSEGLICSSACLQGEVNWHLNTYNERNVRFGAKGY
                     EAAKEAALWYKKVFKDDFYFEIMRHGIGDQRMIDDDIIRLSKELNIKIIATNDTHYTF
                     KDRAAAHEVFMCIAMGKKLNDPGRIRHSVHEFYVKSPEQMSELFADIPEAIENTQEIA
                     QKCNLELNLGNPTPPNFKFTREYAKEYNIILPEETKEFSFDNDDIVFEELCKKGLEER
                     LKFINESKHEEYKQRLEVEINIIKNMKFSGYMLIVHDFIKVAKDKGIPVGPGRGSAAG
                     SLVSYCLRITDLDPIPYSLLFERFLNPERVSMPDIDVDFCQDRRAEVIDYVIDKYGAD
                     KVAQVITFGKLLAKGVIRDVARVCDMSIQDADELAKLVPEELKITLDAAYEKEPKIKE
                     FIERHHKGFEVWEYAKALEGLNRNAGMHAAGVVISNESLWKKTPLFRQSKNDERHLVT
                     QYSKDHLEDVDLIKFDFLGLKTLTVINNAIKLIKKRYNKDIIWETIDVNDSKVYKTIQ
                     SGNTLGIFQIESDGMQSLNARLKPERFEDIIAVLALYRPGPMESGMLDDFIDRKHGLK
                     SIKYPFDSLEKVLEPTYGVIVYQEQVMQIVQIIGGFSLGGADVVRRAMGKKDPEKMKK
                     LKIDFADGAEKQGYNRTEAEDLWELIVKFAGYGFNKSHSAAYALITFQTAYLKTYYPS
                     EFMAALLTSEENNVDKIAVYIDEMKKMNIKLLPPSINKAIREFSALEQDGRDAIIYGL
                     GAIKSVGIPAVENLLEARQNGEFKDINDFLGKIDPTKVNRRTLESLIKAGAFDEFGFT
                     RKALFDNMENLSEVSRKMAEVRKNAASSLFGEEELTSGVQVNFIPKNEEFEVMEKLEY
                     EKEILGIYVSGHPLDRFYEQINAIDYVKSLDFENLKNNGEILSIGKIEDFKSMMSKNN
                     KRYGRLEILDYYSSFDTTVFESNVEEIENIIKDENLKNNAYGFVLGFKAEGGEKPSFF
                     LKAIKDLQSLEDGEVKAIKKFGVKKDFKNKEENQFTAEPREFEKNIIELDLTRLNREL
                     IYEIHEIARNAHNPNEKSNKKLVLKVISTGSCLLYHTDFVISDSIVEEISNKYA"
BASE COUNT         2691 a         1260 c         1021 g         2722 t
ORIGIN      
        1 attattttgg attttagatt attaacttta tttcatcatt ttaggctaga atttgaaaaa
       61 ttaatcaagg aaaatcaaat gactctaatt gcaattttat gtctttacac agcacttttg
      121 tcttggattt cttatgctca aattcgtttt ttagaaaaag aaaaagacaa acaagcccaa
      181 attttaagcg aagaagacta tcaaaatgca gcagatattg ctatagaaaa tgaaaaattt
      241 aaactgtttt caaattttta taatttaatc attaatatcg catgggtagg ctttggattt
      301 ttatatctaa aagaattact tattttaaac aacactcgtt ttgaaaatac tttattttta
      361 ttatcttttc taataatcac aagtatttta aacttgcctc taaatattta cgaaagtttt
      421 gttaaagata aagctcatgg tttttcaaat ataactgtaa agctttttat caaagacact
      481 gtaaaaagtc ttgtcttaac tttagtattt ggatttttca tcctttatgc tttgcttttt
      541 tgttatgatt tttttggagc tttttggtgg attgtagcct ttatttttgc tttttgtata
      601 gtagtgatcg taaatctcat ctaccctact ttgatcgcac ctatttttaa taaaatggaa
      661 aaattagacg atgaaaattt actaaaaaaa atcagctctc taatgaaaca atgcgggttt
      721 aatgcaaatg gagtttatgt tattgatgca agcaaaagag ataaacgttt aaatgcttat
      781 tttggtggac tttttaaaag caaaagagtt gtactttttg atacattatt aaaagcttta
      841 aacgaaaaag aactcttagc tgttttagga catgagcttg gacattttgt tcataaagat
      901 attatcaaag ctttatttaa tagtgctata accatgtttt tacttttttt cgtttttgca
      961 aatttacctg aatttgttta cctagaaagt catttagaag gagtaaatgg tagtgtattt
     1021 gctcttttat ttatctttgc aaatattttt agctttttaa tctctcctgt acttaatgct
     1081 ttaagtagaa aaaatgagtt tgcagccgat caacacggag ctaaaattac aagcaaggaa
     1141 gatatgaaaa atgcactaat agctctagca agagaaaata aagcctttat taaaacaagt
     1201 aaaatatata ctttttttta tcttagtcat ccaagcatta gtgatagaat caaggctctt
     1261 tcttgactat aaaaaacgcc cttacaaaag ctaaatctag cttaaaatgt tatgaaaatg
     1321 aagcagcgtt tatactctgt gaatatctac aaaaagacaa agcttggctg tttttaaacc
     1381 aagatataaa aatagatcac gagtcttatt ttcaacttat aaagcgtttt aaatccgggg
     1441 agccttttga atatatattt gaaaaagtgg atttttgggg tttaaaattt aagataaaaa
     1501 aaggtgtact aatccctcgt tatgatagtg aaattttact ttttcaaatt ttaaatttgt
     1561 gcaaaaaaaa tacttttaat aagattttag aaataggatt tggaagtgga attttaagca
     1621 ttgttttagc caaagaactt ggactaaaaa tcacagcctg tgatatcaat cctaaagcct
     1681 tggaattagc cttagaaaat gccaaattac acaaagttga tcacttaatt aactttaaac
     1741 tttgcaactt taaacaaatt gaagaaaatt atgattttat tttttcaaat ccaccctata
     1801 ttaaaaattc ataccctata gacatttggg tacaaagaga acccaaagaa gctttatttg
     1861 gcggagaaaa aggatatgaa attttggaag aaatcataca tttttctatt gataaaaaag
     1921 ttaaattttt agcttgtgaa ttcggttatg atcaaaaaga ggttttagaa aaaattttac
     1981 atcaaaataa ttttaccgct gattttttca aagatgaaca aggttataat cgtgctttta
     2041 tagctaaatt tacaaatata cgttatgatt aaaaaataaa aggagaaact tttgaaagct
     2101 attaatttat ttttacttgc ctccattata ggagtagagc ttatactagg catagttgtc
     2161 gcaccgacaa ttttttttcc tcaaaatctt ataggagaag gtgttttaag tcattttcaa
     2221 agtggcttaa tgatgacaca aatttttatt aaaatgggtt atttactcat ttttgtttca
     2281 gtgattaatt ttttatatga aatttactct cttatgaaag ataaaattaa atttcaaaca
     2341 aaaatttcaa agctcatgct aagtttgctt attttgattc taagtttaat atttgttttt
     2401 tattttactg ataatataat taaactccaa aacctaggag aaaatgctac aaaaactcaa
     2461 gaatttgtca gcatgcataa tgcaagtgaa gtggtgatta aaatcatctt gataatgcaa
     2521 gtttttttat attttttaag ctttaaaata gtaaaaaaat gataaaatgt ctaacaaatc
     2581 caactaaagg agtaggccat gatgatctct gatgcaacta tgatgcaaca aaattattat
     2641 ttaaacaatg cgcaaaaggc tagtgataaa gctttagaaa atattgcagc tgttcgtgca
     2701 ataagtggag ttgatagtgc taatttagct attgctgatt ctttaagatc tcaatcaagc
     2761 actatagatc aaggtgttgc aaatgcttat gatgctatag gagttttaca aattgcagat
     2821 gctagcctta ctaatatttc tcaaagtgca gataaactta atcaactttc agtaaaaatg
     2881 aacaatgctg cacttaatga ttctcaaaaa ggaatgctaa gagcagaagc aacacgcata
     2941 caagaatcta tcaatgactc ttttaataat gcaacttata acggaaaaaa tgtatttcaa
     3001 actatgaatt ttgtagtagg taatggaacc gaaactacaa atttaaatcc attggcaaca
     3061 gatgaattaa gtatagataa tcaagatagt atcacaaatt ttatggatca acttggaagt
     3121 ttaagaagtg aaataggttc aggcatcaat gctatcacat caaatattaa tgctagtgta
     3181 caaaatagca ttaactcaaa agcagctgaa aataatctac ttaacaatga tatagcaaaa
     3241 aatgtcaatg attttaatgc taattatcta aaagaaaatg ctactgcttt tgttgctgcg
     3301 caatctaaca tacaacttca aaacaaaatt gccaatttgt tacaataata taagccctat
     3361 tttagggctt atttctgtat tagaatgact ttagaacaaa ttttagaaaa aaccaaaaat
     3421 attcgtctta tagcagcaag taaatatgtc gatgcaagta tggttgaaaa gcttttcaac
     3481 caaggcgtag tagaatttgg ggaaaatcaa gtccaagccc tagcacaaaa aaaagaaaat
     3541 cttaacgaaa aaaaactgaa tataaaatgg cattttatag gaacactaca aagcaacaaa
     3601 attaatctct taatcaagca aaaacctata ctgtggcact cttgtaatgg aataaaaata
     3661 gctaaagcca tggataaaag acttgattat aaattaaaca ccttactaga aatcaatagt
     3721 gcaaatgaaa atagcaagag cggcttagat ccaaatcaag ctatagaaga atacttgcaa
     3781 atacaagaag aatgtcccaa tttaaacctt tgtggtgtaa tgagcatagg ctcacacagc
     3841 caagataaag aaaacatcat aaaaagcttt gaaactacct ttaaaattta tgaaattctt
     3901 caaaaacatg gagctaaaat ttgctctatg ggaatgagca atgattttga aattgccata
     3961 aaatgcggat ctaacttagt gagacttgga agtattttat ttaaaaatct taagtaagaa
     4021 acaaagtctt acttaagcgt atttattgga aatttcttct actatactat cagaaataac
     4081 aaaatccgta tgataaagca aacaagatcc cgtactgata acttttaaaa caagtttctt
     4141 gttgcttttt tcattaggat tgtgtgcatt tctagcaatt tcatgaattt catagattaa
     4201 ttctctattt aatcgtgtca aatctaactc tatgatattt ttttcaaatt ccctgggttc
     4261 tgcagtaaat tgattttctt ctttgttttt aaaatctttt tttactccaa atttttttat
     4321 agccttaacc tcaccatctt caagactttg taaatcttta attgctttta aaaaaaagct
     4381 aggtttttcc cctccttcag ctttaaatcc caatacaaaa ccataggcat tattttttaa
     4441 attttcatct ttaatgatat tttctatttc ttctacattg ctttcaaaca cagtagtatc
     4501 aaacgaagaa taataatcta aaatttcaag cctaccataa cgcttattat ttttactcat
     4561 catggatttg aaatcctcaa ttttacctat acttaaaatt tctccattgt tttttaaatt
     4621 ttcaaaatct aaacttttaa cataatctat ggcattaatt tgctcataaa atcgatccaa
     4681 aggatggcct gaaacataaa tccctaaaat ttctttttca tattctaatt tttccatcac
     4741 ttcaaattct tcatttttag gaatgaaatt tacttgaaca cctgaggtta attcctcttc
     4801 accaaaaaga gaacttgcag cattttttct tacttcggcc attttacgtg atacttcact
     4861 aagattttcc atattatcaa acaaagcttt tctagtaaag ccaaactcat caaaagcccc
     4921 tgctttaata agactttcta atgttctacg gtttacctta gtaggatcta tcttgcctaa
     4981 aaaatcatta atatctttaa attctccatt ttgtcttgct tcgagcaaat tttcaaccgc
     5041 aggaataccc acacttttaa tagccccaag tccatatata atagcatctc ttccatcttg
     5101 ctctaaagca ctaaattcac ggatagcttt attaatcgac gggggcaaaa gtttgatatt
     5161 catttttttc atctcatcga tataaacagc aattttatct acgttatttt cttcacttgt
     5221 taaaagtgct gccataaatt cactaggata ataagttttt aaataagctg tttgaaaagt
     5281 aatcaacgca taagctgcag agtgagattt attaaaacca tatcccgcaa attttacaat
     5341 aagctcccat aaatcttcag cttctgttct attatatcct tgcttttctg ctccatctgc
     5401 aaagtctatc ttaagttttt tcattttttc aggatctttt ttacccatag cacgacgcac
     5461 tacatcagca cctcctaaag aaaagccacc tataatttga acgatttgca taacttgttc
     5521 ctgataaaca ataaccccat aagtaggctc taaaaccttt tctaaactat caaaagggta
     5581 ttttatgctt tttaaaccat gttttctgtc gataaaatca tcaagcattc ctgattccat
     5641 aggacctgga cgataaagtg caagaaccgc gatgatatct tcaaaacgct ctggttttaa
     5701 gcgcgcattc aaactttgca ttccatctga ttcaatttgg aaaattccta aagtatttcc
     5761 actttgtata gttttataaa ccttactatc atttacatct atagtttccc aaataatgtc
     5821 tttattataa cgctttttaa taagcttaat tgcattatta attaccgtta aagtcttaag
     5881 acctaaaaag tcaaatttta tcaaatctac atcttctaag tgatctttag aatactgcgt
     5941 tactaaatgt ctttcatcat ttttactttg tctaaaaagt ggagtttttt tccataaact
     6001 ttcattggaa atcaccacac ccgctgcgtg catacctgca ttacgattta atccttctaa
     6061 agcctttgca tactcccaaa cctcaaaacc tttatgatga cgctcgataa attctttaat
     6121 tttaggttct ttttcgtaag cagcatcaag agtgatttta agctcttcag gcacaagctt
     6181 ggcaagctca tcagcatctt gaatactcat atcacaaact ctagctacat cacgaattac
     6241 ccctttagct aaaagtttac caaaagtaat tacctgtgct actttatctg ctccatactt
     6301 atcaatcaca taatcaatca cttcagcacg cctatcttga caaaaatcta catcaatatc
     6361 aggcatactc acacgctcag gatttaaaaa acgctcaaaa agcaagctat aaggaatagg
     6421 atctaaatcc gtaattctta aacaataaga aaccaaactt ccagcagctg atccccttcc
     6481 aggacccact ggaatgcctt tatccttagc cactttaata aaatcatgaa cgataagcat
     6541 ataacctgaa aatttcatat ttttaataat gttaatttct acttcaagtc tttgtttata
     6601 ttcttcatgt ttgctttcat taataaattt caatctttct tcaagccctt ttttacaaag
     6661 ctcttcaaaa actatatcat cattatcaaa gctgaattct tttgtttctt caggtaaaat
     6721 aatattatac tctttagcgt attctcttgt aaatttgaaa tttggtggag taggattgcc
     6781 aagattaagt tctaaattgc atttttgtgc aatttcttgt gtattttcta tagcctctgg
     6841 aatatctgca aaaagttcac tcatttgctc agggcttttt acataaaatt catgcacact
     6901 atgacgtatt ctaccaggat cattaagttt ttttcccata gcaatacaca taaaaacttc
     6961 atgagcagct gctctgtctt taaaagtata atgtgtatca tttgtagcga tgatttttat
     7021 atttaattct ttagaaagtc tgataatatc atcatctatc attctttgat cacctatacc
     7081 atggcgcata atttcaaaat aaaaatcgtc tttaaaaact tttttatacc acaatgccgc
     7141 ttcttttgct gcctcatagc cttttgcacc aaagcgcaca tttctttcgt tataagtatt
     7201 taaatgccaa tttacctcac cttgtaaaca agcagaagaa caaataagtc cttcactata
     7261 ttcttctaaa agctttttat tgatacgtgg ataataatac aaacctttga tataactttg
     7321 agaacttaaa tacattaaat tttgatagcc aatttcattt tttgcataca aacaaaggtg
     7381 aaaacgttgg cgcgagcttt tatcgtctaa ttcatcatga ttatgtaaat atgcttctat
     7441 gccgataata ggttttaaac cttgagcttt cattgtttga taaaagtcaa ttgctccaaa
     7501 catatttcca tggtctgtca tagccacact tgtagcaccc tgctctttta aagttaaagc
     7561 taattcttta agtttattag ctccatcaag taaggaatat tccgtatgca aatgcaaatg
     7621 tgtaaattga ctcattttct tcctttagtt tttcaaagtt tattaaaatt ttaataaaaa
     7681 ttataaattt ttct
//
LOCUS       DAPWAA010000069         7688 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.069, whole genome shotgun sequence.
ACCESSION   DAPWAA010000069 DAPWAA010000000
VERSION     DAPWAA010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7688
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.069"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            36..332
                     /locus_tag="RTF91_001472"
     CDS             36..332
                     /locus_tag="RTF91_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDZ4944339.1"
                     /translation="MTKADFISLVAQTAGLTKKDATTATDAVISTITDVLAKGDSISF
                     IGFGTFSTQERAAREARVPSTGKTIKVPATRVVKFKVGKNLKEAVAKASGKKKK"
     gene            460..1359
                     /gene="cysM"
                     /locus_tag="RTF91_001473"
     CDS             460..1359
                     /gene="cysM"
                     /locus_tag="RTF91_001473"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HDZ4944340.1"
                     /translation="MKVHEKVSDLIGNTPIIHLKKFGINIFAKCEFLNPSHSIKDRAA
                     FEMIKDALDNKKINQDTTIVEATSGNTGISLAMICADLGLKFIAIMPESMSLERRKMM
                     MLFGARLELTPANLGMKGAVDKANEILLNTPNSFMISQFENISNKNAHRKNTALEILR
                     DLDNELDIFVAGFGTGGTISGVGEILKEKLEKVYVVGVEPLNSPLLSKGEAGSHKIQG
                     IGANFIPAILNKDVIDEVITVSNEDAINTARELAKSGLMVGISSGANVFAASILAKKF
                     PDKRILTMLNDTAERYLSTDLFA"
     gene            complement(1366..1926)
                     /locus_tag="RTF91_001474"
     CDS             complement(1366..1926)
                     /locus_tag="RTF91_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HDZ4944341.1"
                     /translation="MKKIIILFITTVAIILGVMFFLKNHQNSYDFVLKSDLKEETTLK
                     DFKGDKLIVYFGYTYCPDICPATLSLVGKILKQINNPKAHLLFISLDPDRDNNLSNTN
                     EWLRYFYPKADTLISKDEKTLQKITKQYNVQYQKIDLNDSFMGYSIAHSNMLYLIDEK
                     GHFYKGISDLNPQEVSRELRNFLNSQ"
     gene            complement(1923..2375)
                     /locus_tag="RTF91_001475"
     CDS             complement(1923..2375)
                     /locus_tag="RTF91_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944342.1"
                     /translation="MRKIIFILAFAFIIVILYIILDFYVIKDSQKAIKADFSTPLACD
                     LNIQDCKYSFNNREILISLNPKPLQSLDVTNLRIVNLGNYENLGIKIYGLNMYMGEIK
                     PKIHRLNSTDYESKIVLATCVLDTMRFRVEFMDNNKPIGFHFDFELKK"
     gene            complement(2379..2798)
                     /locus_tag="RTF91_001476"
     CDS             complement(2379..2798)
                     /locus_tag="RTF91_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HDZ4944343.1"
                     /translation="MKKILLLSTLFALNLWAANDIEVKNVFVKQTPPHAQNSTIFLTI
                     FNNTDKDIALISAKSDISEATELHTHIHQDGKMMMQKIPEIVIKAHSSTELKSGGYHI
                     MLLKLKKPIVEDTKVNLDLEFNNHKTIELKNIESKEF"
     gene            3404..4381
                     /locus_tag="RTF91_001477"
     CDS             3404..4381
                     /locus_tag="RTF91_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HDZ4944344.1"
                     /translation="MLKRLALLITLSSMMLHASDLVKIYLNQGLNAVGAAIEKELTQK
                     DFWLGEIGDKNVSLGYYDDNVAIVLTNKTDKILRVYFYEDGKIRKDFEQKEIITGLMG
                     NKKTEGDLKTPVGFYELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYP
                     LDGSRIDEFKTRGCIALFNNNLEKFAQIVQDKKVFVMTEEEKKVRATKDEIASLLADL
                     FMWKLAWTNSDINTYLSFYDELKFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSSINI
                     SPYPNLENETMYRISFYEDYYTKNYQFRGNKILYVKIDNKGKMKILAEQ"
     gene            4382..5368
                     /locus_tag="RTF91_001478"
     CDS             4382..5368
                     /locus_tag="RTF91_001478"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDZ4944345.1"
                     /translation="MSLIKIDQKAYEHNLRYIARKIGNFQRLICVFKDNAYGHGAKLL
                     APLAKNLGVSFVAVKSEEEAQEIEEFFENILILSHRPHGNENSKFIYALNDISQIKDY
                     KQGAKIHLKIDTGMHRNGVCTEDLEYAIGLIQSSNLKLTGMFTHFASADEMNGSFFVQ
                     KENFQKAKKIVKKYFSNLLFHSHNSAALLRGNIPEDEYCRIGLVQFGYGDLNLKKVLS
                     LYAHRLSQRVLRKGQSIGYGGIFTATKDLEVATYDLGYADGLFRYSGKKELILGNGKI
                     MLGKMSMDSFSCENSGEEICVFNDADVWADFFHTISYEILVKLNPNIQRVLV"
     gene            5372..5839
                     /locus_tag="RTF91_001479"
     CDS             5372..5839
                     /locus_tag="RTF91_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HDZ4944346.1"
                     /translation="MFNIVLVHPRIPQNTGSIGRMCFNAGFKLHIVKPSVFDISQKAV
                     RRAGLDYWDKLEPIIWENLEEFLNENIIHKNRFFFATTKSQKPYFDVEFQKNDFLFFG
                     SESYGLSMELMQLNWQNAITIPMKSYGRSLNLATSVGIISYEALRQNFSNFIS"
     gene            6119..6334
                     /locus_tag="RTF91_001480"
     CDS             6119..6334
                     /locus_tag="RTF91_001480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944347.1"
                     /translation="MLEFLWHLSSGAGAFFECGYGIFWQSLALAENTLAQICKSKNDT
                     DGKTHKPLRLMINDLKLCLKILLIFHC"
     gene            complement(6285..7013)
                     /locus_tag="RTF91_001481"
     CDS             complement(6285..7013)
                     /locus_tag="RTF91_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDZ4944348.1"
                     /translation="MIEIKNLQKKYGDLEVLKNINTTISKGDIIAIIGPSGSGKSTFL
                     RCINRLELADSGKILINKQNILDKEIDINIIRQKVSMVFQHFNLFANKNVMENLCLAP
                     IKTGVLNREEAIKKAKILLAKVGLTDKENIMPHKLSGGQKQRIAIARSLMMNPDVILF
                     DEPTSALDPEMIGEVLSIMKDVAKENLTMLVVTHEMGFARNVANRIFFMDKGKIAVDA
                     NPKEVFENPSNERLKEFLNKVLNH"
     gene            complement(7006..7662)
                     /locus_tag="RTF91_001482"
     CDS             complement(7006..7662)
                     /locus_tag="RTF91_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004275372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDZ4944349.1"
                     /translation="MQDPSGVVSYGYTENAKAYLKSYLVTLLLTACAVIIGVIIGFSL
                     AILRFSKFKTLNLIIDEYIDIIRGTPVILQLMIFAFVIFTFIDNLYAAILALGLNSSA
                     YIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANEFISLFKE
                     TSVVGFISVVDITMQSQSLQAVLYNPKPIIFTGLVYYVSVKIFSYFAKKLELRMNKND
                     "
BASE COUNT         2754 a          951 c         1212 g         2771 t
ORIGIN      
        1 acaattaacg ctccaataat aaaaaaggag tttttatgac caaagcagat tttatttcat
       61 tagttgctca aacagctgga ttaacaaaaa aagacgctac tactgctact gatgcagtta
      121 tttctactat tactgatgtt ttagctaaag gtgatagcat tagttttatc ggttttggca
      181 ctttttcaac ccaagaaaga gctgctagag aagctagagt accaagtaca ggaaaaacaa
      241 tcaaagttcc tgctacaaga gttgtaaaat ttaaggtagg taaaaacctt aaagaagctg
      301 ttgcaaaagc aagcggaaaa aagaaaaaat aaaactttgg ctagatagtt tctagccttc
      361 tttcttaaat taattcaaat attttttatc ttttgtttac tttatttttt taaactttta
      421 taaagctatc attatcaaat aaaaaaggat attaaaatta tgaaagtgca tgaaaaagta
      481 agcgatctta taggaaatac tcctattata catttgaaaa aatttggtat taatattttt
      541 gctaaatgtg agtttttaaa tcctagtcat tctataaaag atagagcagc ttttgaaatg
      601 attaaagacg ctttagataa taaaaaaatc aatcaagata ctacaatagt tgaagccact
      661 agtggaaata ctggaatttc tttagctatg atttgtgcag atttagggct taaatttatt
      721 gccataatgc cagaatctat gagcctagaa agaagaaaaa tgatgatgct ttttggtgct
      781 aggttagaac taactcctgc aaatttaggg atgaaaggtg cagttgataa agcaaatgag
      841 attttactaa atactccaaa ttcttttatg atttctcaat ttgaaaatat ttcaaataaa
      901 aacgcgcatc gcaagaatac agctttggaa attttaagag atttggacaa tgaacttgat
      961 atttttgtag ctggttttgg aacaggtggc actattagtg gggttggaga aatattaaaa
     1021 gaaaaattag aaaaagtgta tgttgttgga gttgaacctt taaattctcc attgcttagt
     1081 aaaggtgaag caggcagtca taaaatacaa ggaataggag caaattttat acctgctatt
     1141 ttaaataaag atgttataga tgaagttatt acagtaagca atgaggatgc tataaataca
     1201 gccagagaac ttgctaagag tggtttaatg gtgggtatat caagcggggc aaatgtattt
     1261 gctgcaagta tattggcaaa gaaatttccg gataaaagaa ttttaactat gctaaatgat
     1321 acagctgaaa gatatctttc aactgatctt tttgcctaag tagaattatt gagaatttag
     1381 aaaatttcta agttctcttg aaacttcttg cgggtttaaa tcgctaattc ccttataaaa
     1441 atgacctttt tcatcaatga gataaagcat attgctatgt gctatagaat aacccataaa
     1501 agaatcattt agatctattt tttgatattg aacattgtat tgttttgtta ttttttgaag
     1561 agtcttttca tcttttgaga tcagagtatc tgcttttgga tagaaatatc gtaaccattc
     1621 gtttgtattg cttaggttat tatctctatc tggatctaaa gaaataaaaa gaaggtgagc
     1681 tttagggtta ttaatttgtt ttagaatttt acccactaaa ctaagagttg ctgggcaaat
     1741 atcagggcaa taggtatacc caaaatagac aataagctta tctcctttaa aatcttttag
     1801 agtggtttct tcttttaaat ctgactttaa gacaaaatca taagaatttt gatgattttt
     1861 aagaaaaaac attacgccca aaataattgc aactgtagtt ataaataaaa taattatttt
     1921 tttcattttt ttaactcgaa atcgaaatga aatcctatgg gtttgttatt atccataaat
     1981 tctaccctga aacgcatagt gtctaaaaca caggttgcaa gaactatttt gctttcataa
     2041 tctgttgaat ttaatcgatg tattttaggt ttaatttcgc ccatatacat atttaatcca
     2101 taaattttaa ttcccaaatt ttcataattc cctaaattta caatccttaa atttgtaaca
     2161 tctaaagatt gtaaaggttt gggatttaga gaaattaaaa tttctctatt attaaaactg
     2221 tatttgcagt cttgaatatt aagatcacaa gctaatggag tagaaaaatc agcttttatt
     2281 gctttttgag aatcttttat tacataaaaa tcaagaataa tatataaaat gacaataata
     2341 aaagcaaaag ctaggataaa aataattttt ctcatcaatt aaaattcttt agattcaatg
     2401 ttttttagct ctatggtttt atgattatta aattctaaat ctaaatttac cttcgtatct
     2461 tcaacaatag gtttttttag ttttaaaagc attatatgat aacctcctga tttaagctct
     2521 gtgcttgaat gagcttttat aacaatttca ggaatttttt gcatcatcat ttttccatct
     2581 tgatgtatat gtgtatgcag ttcagtcgct tcactgatat cacttttagc acttattaga
     2641 gcaatatctt tatcggtatt attaaaaata gtaagaaaaa tagtactatt ttgtgcatga
     2701 ggtggagttt gttttacaaa gacatttttt acctctatat cattagcagc ccaaagattt
     2761 aaagcaaaaa gagtacttaa gagaagaatt tttttcatat tgtatcctta gttttataat
     2821 attaaatatt tattcattat atcaaaaaat atttctattt tgaatataaa attttaaaat
     2881 ttttcaatgt atgtcatttg ttgtttgaaa attcttttgc atagcaacat taaaatcaaa
     2941 gaaaaaacta tcaagtgtta ttgcttaaaa tttcaactct aaaaatttta tagaataatg
     3001 aggaaaattt ttaattttta taatgatcat ggttttgtta aaaatttttg tagattttgg
     3061 ataggttaaa acttcaatgt ttttttaatt ataaggaaaa aataatttaa gttgtaagtt
     3121 agaggttgat atgttaaact aaatacgctt tctttattat tattattatt attataataa
     3181 ttaacgtaag gggccaaaaa caaaatgcct aaattaagaa tattcctata aaaaattctt
     3241 atcattgtag ataagctttt aaaataaatc ttatgattta taaaaataat atcataaata
     3301 aggctgcatt gttaatataa tttagtatct tttaaaaaaa aaacattata attaccattt
     3361 ctgactcgaa aaattttaaa tactttattt ataaggaaaa acattgttaa aacgactcgc
     3421 tttattaatt acactttctt caatgatgct tcatgcttca gatcttgtta aaatttatct
     3481 taaccaagga ttaaatgctg ttggtgcggc gattgaaaaa gaattaactc aaaaggattt
     3541 ttggttaggt gaaatagggg ataaaaatgt ttcacttgga tactatgatg ataatgttgc
     3601 tattgtgctt acaaataaaa cagataaaat tctccgtgtt tatttttatg aggatggaaa
     3661 aataaggaag gattttgaac aaaaagaaat aataacggga ttaatgggta ataaaaaaac
     3721 agaaggagat ttgaaaactc cagtaggttt ttatgagtta ggccgtaagt ttaatccagg
     3781 agatccttat tatggtcctt ttgcttttgc tacaacttat ccaaatttgc ttgataaagt
     3841 acaaggaaaa acaggcggcg gtatttggat tcacggttat cctttagatg gttctaggat
     3901 tgatgaattt aaaacaagag gatgtattgc tttgtttaat aataacttag aaaaattcgc
     3961 acaaattgta caagataaaa aagtttttgt catgacagaa gaagaaaaaa aagttagagc
     4021 cacaaaggat gaaatagcta gtttgttagc tgatcttttt atgtggaaac tagcttggac
     4081 aaatagcgat attaatactt atttaagttt ttatgatgaa ctaaaattta agcgttttga
     4141 taaaatgaaa tttgaacaat ttgcttccat gaaaaaatct attttttctc gtaaagaaga
     4201 taaaaagatt aaattttcaa gtattaatat cagtccttat ccaaatttag aaaatgaaac
     4261 tatgtataga atttcatttt atgaagatta ttacactaaa aattatcagt ttagaggtaa
     4321 taaaatttta tacgttaaaa tagataataa aggcaaaatg aaaattttag cagagcaata
     4381 aatgtcttta ataaaaattg atcaaaaagc ttatgagcat aatttaagat atattgctag
     4441 aaaaataggg aattttcaaa gattaatttg tgtttttaaa gataatgcat atggacatgg
     4501 agctaagctt ttagctccgt tagctaaaaa tttaggagtt tcttttgttg ctgttaagag
     4561 tgaagaagaa gctcaagaaa tcgaagagtt ttttgaaaat atattaatac tgtcacatcg
     4621 tccccatggt aatgaaaatt ctaaatttat ctatgcttta aatgatattt ctcaaataaa
     4681 agattacaaa caaggtgcaa aaatacatct aaaaatagac acgggtatgc atcgtaacgg
     4741 ggtttgtacg gaagatttag aatatgctat aggtcttatt caaagtagca acttaaaact
     4801 tactggaatg tttactcatt ttgctagtgc tgatgagatg aatggaagtt tttttgttca
     4861 aaaggaaaat tttcaaaaag ccaaaaagat agtaaagaaa tatttttcaa atttattatt
     4921 tcattcgcat aattctgctg cattacttag aggaaacatt cctgaagatg aatattgtag
     4981 aattggactt gttcaatttg gatatgggga tttaaattta aaaaaagttt tgagtttgta
     5041 tgcgcataga ttaagccaaa gagtattgcg aaaagggcaa agtatagggt atggaggtat
     5101 ttttactgct acgaaggatt tggaagtagc aacttatgat ttaggttatg ctgacggtct
     5161 ttttcgttat agtggaaaaa aagagttgat acttggaaat ggaaaaataa tgcttggaaa
     5221 gatgtcaatg gatagttttt cttgtgaaaa ttctggtgag gaaatttgtg tgtttaatga
     5281 tgctgacgtt tgggctgatt tttttcatac tatcagctat gaaattttgg taaaattaaa
     5341 tcctaatatt caaagagttc tagtataaat tatgtttaat atagttttgg ttcatcctag
     5401 aataccacaa aatacaggca gtataggtag aatgtgtttt aatgctggct ttaagcttca
     5461 cattgttaaa cctagtgttt ttgatatttc tcaaaaagct gttagaagag cagggcttga
     5521 ttattgggat aaattagagc ctattatttg ggagaatctt gaagaatttt taaacgaaaa
     5581 tatcattcat aaaaatcgct ttttttttgc aacaactaag agtcaaaaac cttattttga
     5641 tgtagaattt cagaaaaatg attttttatt ttttggaagt gagagctatg gtttatctat
     5701 ggaattaatg cagttaaatt ggcaaaatgc cataactata cctatgaaat cttatgggag
     5761 aagtttaaat ttagctacaa gtgttggtat aatttcttat gaagctttaa gacagaattt
     5821 tagtaatttt atttcttaaa agtttcaaat ttatacaata acttaaaaca aataaaatca
     5881 taaagtcttt ttcataaaaa ttatgttgaa agtaaaattt atattatttt ttttgagagg
     5941 agtttagatg aatttagata ttgttctagc ttttgctata aagcgtttga tattatagtt
     6001 ttttaacttg ctttgttcat aagttctgtg tttaaaatat ttacaaaaaa atgaagatat
     6061 acaaaaacat attaagcatt gatggtctta actgcttcta gggttgctat aggaaatatt
     6121 gctagaattt ctttggcatt tgtccagtgg agctggtgct ttttttgaat gtggttatgg
     6181 cattttttgg cagagtttag cacttgctga aaacacttta gctcaaattt gcaaatcaaa
     6241 aaatgataca gatgggaaaa cccataagcc attaaggctt atgattaatg atttaaaact
     6301 ttgtttaaaa attcttttaa tctttcattg ctaggatttt caaatacttc tttagggttt
     6361 gcatcaacag caatcttgcc tttatccata aaaaatatac gattggcaac atttcttgca
     6421 aagcccattt catgagttac tacaagcata gttaaatttt cttttgcaac atctttcata
     6481 atgcttaaaa cctcacctat catctcagga tcaagggctg aagtaggttc atcaaataaa
     6541 ataacatcag gattcatcat taagcttctt gcaatagcta tgcgttgctt ttgtccacca
     6601 gagagtttgt gaggcattat gttttctttg tctgttaagc ctactttagc aagaagtatt
     6661 tttgcctttt ttatagcttc ttcccggttt aaaacccctg ttttaatagg tgctaaacat
     6721 aaattttcca taacattttt attggcaaaa agattaaagt gttgaaatac catgctaact
     6781 ttttgtctaa ttatgttaat atcgatttct ttatcaagta tgttttgttt attgattaaa
     6841 atttttccac tatcagctag ttctaaacga ttgatgcaac gtaaaaatgt gctttttcca
     6901 cttccacttg gacctatgat agctatgata tcgccttttg agattgtggt attaatattt
     6961 tttaaaactt ctaagtctcc atattttttt tgtaaatttt taatttcaat catttttatt
     7021 catcctaagt tcaagttttt ttgcaaaata gctaaaaatt tttacactta cataataaac
     7081 aagtccggtg aaaataatag gcttaggatt gtaaagtaca gcttgcaaac tttgactttg
     7141 catagtaata tcaacaacac taataaatcc tacaactgaa gtttctttaa ataaggaaat
     7201 aaattcatta gccaatgcag gcaggatatt tttagtagct tgaggaagga taatttcttt
     7261 cattgaggtt ttataatcaa gtcccattgc tcttgcagcc tccatttgcc ctttatctac
     7321 gctattaatc ccacttctta caatttctgc tatataggct gaactattaa gtcctaacgc
     7381 aagaatggct gcataaaggt tatctataaa agtaaaaatt acaaaagcaa aaatcatcaa
     7441 ttgtaaaatt acgggtgttc ctcgtatgat atctatatat tcatctataa tcaaattaag
     7501 tgttttaaac ttagaaaagc gtaaaatagc taaactaaaa ccaataatca ccccgataat
     7561 aacagcacaa gcggttaaca aaagtgtaac aagataactt tttaaataag cttttgcatt
     7621 ttctgtataa ccatagctta caactccgct aggatcttga atttttaata tttcataagg
     7681 aaaagaaa
//
LOCUS       DAPWAA010000070         7450 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.070, whole genome shotgun sequence.
ACCESSION   DAPWAA010000070 DAPWAA010000000
VERSION     DAPWAA010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7450
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.070"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..2078)
                     /locus_tag="RTF91_001483"
     CDS             complement(<1..2078)
                     /locus_tag="RTF91_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDZ4944350.1"
                     /translation="MKELFQKIWQNELQFLDFDAKFQDKNKLDIAEYAIILSVNKDNY
                     ERYFLLKKFQELCKKIDLRVDIFSIQNAQICILDLFKSGFIPKQDLLKALKILEKISK
                     NTEMFDFISQEWVQSIDQKALFQNDFKELNTINLELQELSFDENLKSRLQKTLEKFQN
                     LEFNIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLSYGKSEEAKIYFWDKK
                     EWQNILESSQFNTDLKEFINRLNKSVNIEDFIKDKPLTQSIALCELKNFSSAKNKISA
                     LIKKIEIKSHLEFLKNNISIVDTPGLDDVVVQREIVTNEYLRESDFLIHLMNASQSLT
                     QKDSDFLIHCLLNSRLSKFLIVLTKADLLSEKDLEEVIVYTKESLKSRLVDLDENLVE
                     KIDFLCVSAKMASDFYKGLAPKESLQKSGMQEFETYLFNELYAGEKSKIALRAYKKEL
                     YIELKNILNEYEIQNQMIKENKQGLSEENQNLLLEFKNQAAILKEAQDEISNSIAKLK
                     NIDNGIDNLVLLLAKKLKERLIDEFKYLKNNTQKLNISRILNIVDITTKDGINDILRE
                     VKFENIKKIEELKTNLSLKYDFLKDDFDNGFEGFKDGISKNIDSIFQSEKFALLRLKI
                     EKLSNLKSDLYELEASLDTVIFDTFKEFKISLILNSLDINGAFFDFLNEKLKHYEKNQ
                     KSKLESLEKVL"
     gene            complement(2106..2831)
                     /locus_tag="RTF91_001484"
     CDS             complement(2106..2831)
                     /locus_tag="RTF91_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur subunit"
                     /protein_id="HDZ4944351.1"
                     /translation="MSRKLTIKAFKYNPLSKISKPHFVTYELEETPFMTVFVCLTLIR
                     EKMDADLSFDFVCRAGICGSCAMMINGVPKLACKTLTKDCLDGVIELMPMPAFRHIKD
                     LSVNTGEWFEDMCKRVESWVHNEKETDISKLEERIEPEVADETFELDRCIECGICVAS
                     CATKLMRPNFIAATGLLRTARYLQDPHDHRTVEDFYELVGDDDGVFGCMSLLACEDNC
                     PKELPLQSKIAYMRRQLVAQRNK"
     gene            complement(2824..4815)
                     /locus_tag="RTF91_001485"
     CDS             complement(2824..4815)
                     /locus_tag="RTF91_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase flavoprotein subunit"
                     /protein_id="HDZ4944352.1"
                     /translation="MNIQYSDALVIGGGLAGLRAAIEVAKSGQSVTLLSICPVKRSHS
                     AAVQGGMQASLGNGAKGEGDNEDLHFADTVKGSDWGCDQEVARMFAQTAPKAVRELAA
                     WGVPWTRVTKGPRTVVINAQKTVIEEKEEAHGLINARDFGGTKKWRTCYIADATGHCM
                     LYGVANEAIKHQVKIIDRMEAVRIIHDGKKCLGVIARDLTNGQLIAYIARGTMIATGG
                     YGRIYKQTTNAVICEGTGAAIALETGLCRLSNMEAVQFHPTPIVPSGILLTEGCRGDG
                     GILRDVDGYRFMPDYEPEKKELASRDVVSRRMMEHIRKGKGVKSPYGDHLWLDISILG
                     RAHVEKNLRDVQDICKTFNGIDPADEGPKGWAPVLPMQHYSMGGIRTKPTGESQWLNG
                     LFACGEAACWDMHGFNRLGGNSCAETVVAGMIVGDYFADYCKNNGEVIDTNVVKDFLS
                     KEYQYLKSLVDKEGKYNVFEIKNRMKEIMWDKVAIFRTGEGLKEAVDELEKLYKDSQD
                     VKVHCKELDCANPELEEAYRVPRMLKIALCVAYGALLRTESRGAHYREDYPKRDDLNW
                     MKRTNTFWVEGETLPRIEYEELDIMKMEIPPAFRGYGAKGNIIENPLSEKRQAEVDAI
                     REKMEAEGRGRYEIQNALMPYELQAKYKAPNQRIGVDYE"
     gene            complement(4799..5575)
                     /locus_tag="RTF91_001486"
     CDS             complement(4799..5575)
                     /locus_tag="RTF91_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase cytochrome b subunit"
                     /protein_id="HDZ4944353.1"
                     /translation="MSELIEGYLGRSIEGKKSKMPAKLDFIQSASGLFLGLFMWVHML
                     FVSTILVSEDFFNSVVHFLELKFVYDNPVMSYLTSFLAACVLVVFFVHALLAMRKFPI
                     NYRQYQILRTHSKKMNHSDTSLWWVQAFTGFIMFFLGSAHLIFIVTNADKISSDMSGD
                     RVVSHFMWLFYAVLLVCVELHGSIGLYRLCVKWGWFEGKNIKESRKKLKVAKWVISIF
                     FLVLGVLSLAAFIKIGYENYQNQTTAMIKNYNGANYEYTI"
     gene            complement(5641..6456)
                     /locus_tag="RTF91_001487"
     CDS             complement(5641..6456)
                     /locus_tag="RTF91_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDZ4944354.1"
                     /translation="MEFWQHIYSNFNVIAFTIFGLKVHWYGIMYVIALLLALFLAKFF
                     VRKFKLNIDEKYLDSYFIWVEIGVILGARLGYILIYDANTMYYITHPWQIFNPYIDGE
                     FVGIRGMSYHGAIIGFLIATLLFCKKYKTNPWIFLDLVALSVPLAYVFGRIGNFLNQE
                     LFGRITNVPWGIYVDGVLRHPSQLYEAFLEGIVVFIIVYLARFKQSFQGELILVYAGA
                     YSLARFMCEFYREPDFGIGFVLWGMSMGQILSLIMFIVALLVYVYIKFKKVNI"
     gene            6547..7443
                     /locus_tag="RTF91_001488"
     CDS             6547..7443
                     /locus_tag="RTF91_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944355.1"
                     /translation="MKKYILLASMLILTACGGTSSNFVNLSMPNFKPQVPTKIEPIDS
                     GVSITLEPINIEQNNNYSDYFENSVLKIRIEKEIELLKQNLEEQIKTIVQLKGYKIVN
                     TNPDYTLKSLISVYTEEKNAQKTSNFMNGDYVKSNLGINFKGKIDFIDAHNPQNSTNL
                     SSNTKLDSLVTLSYPIKNDDGVNMFKTTISTVPTQLNKGLEQPAFEIDKSFLAFYKNT
                     LTTLYNNLPKATDIGKTIPNTNNDFNNFDGNATFEESLPQTNSNQNNTIKNAPTQNIS
                     INPSTTNQNNGSKNQDGVEIFK"
BASE COUNT         2604 a         1439 c          838 g         2569 t
ORIGIN      
        1 agaacttttt caagactttc taattttgat ttttgatttt tttcataatg ttttaatttt
       61 tcatttaaaa aatcaaaaaa tgctccatta atatccaaag aatttaaaat gagtgaaatt
      121 ttaaattctt tgaaagtgtc aaaaataacc gtatccaaac tagcttcaag ttcatacaaa
      181 tctgatttta aattgcttaa tttttcaatt ttcaatctta aaagtgcaaa tttttcactt
      241 tgaaaaatac tgtctatatt ttttgagatt ccatctttaa aaccctcaaa accattatca
      301 aaatcatctt ttaaaaaatc atattttaaa gataaatttg ttttaagctc ctcgattttt
      361 ttaatatttt caaatttaac ctctcttaaa atatcattaa tcccatcttt tgtagtaata
      421 tccactatat ttaaaatacg agaaatatta agtttttgtg tattattttt tagatattta
      481 aactcatcta tcaagcgttc ttttaatttt ttagccaaaa gtaaaacaag attatctata
      541 ccattatcta tatttttaag ctttgcaata gaatttgaaa tttcatcttg agcttctttt
      601 aaaattgcag cttgattttt aaattcaagc aaaagatttt ggttttcttc acttaaacct
      661 tgcttgtttt cttttatcat ctgattttgt atttcatatt catttaaaat attcttaagt
      721 tctatatata attctttttt ataagctctt agagcaatct tacttttttc tcctgcataa
      781 agttcattaa aaagatatgt ttcaaattct tgcataccgc ttttttgtaa actctcctta
      841 ggtgctaaac ctttataaaa atcacttgcc attttagcac tcacacataa aaaatcaatc
      901 ttttcaacta aattttcatc taaatccaca agtcttgatt ttaggctttc cttagtataa
      961 acaatgactt cttctaaatc tttttcactc agtaaatccg ctttagttaa aacgattaaa
     1021 aacttactaa gtcttgagtt taaaagacaa tgtattaaaa aatctgaatc cttttgagtc
     1081 aagctttgag aagcattcat tagatgaatt aaaaaatcac tttccctaag atactcattt
     1141 gtaacaattt ctctttgaac tacaacatca tcaagtcctg gggtgtcaac tatagaaata
     1201 ttatttttta aaaattccaa atgactttta atttctattt ttttaattaa agccgaaatt
     1261 ttatttttag cagaactaaa atttttaagt tcacaaagcg caatgctttg agttaaaggt
     1321 ttatctttga taaaatcttc tatatttaca ctcttattaa gtctattaat aaattctttt
     1381 aaatctgtat taaattgcga actttcaagt atattttgcc attctttttt atcccaaaaa
     1441 tatatctttg cctcttcgct cttgccataa cttaaaactg ttaaattagc tgtttcaggt
     1501 atatttgaaa cccctaaaaa atcttccttt aaaagagcgt ttaaaagact tgattttcct
     1561 gcattcatca caccggtgat ggctatatta aactctaaat tttgaaattt ttctaaagtc
     1621 ttttgaagtc ttgattttaa attttcatca aaacttagtt cttgaagctc tagattaata
     1681 gtatttaatt ctttaaaatc attttgaaat aaagcttttt gatcaatact ttgaacccat
     1741 tcttgtgaaa taaaatcaaa catttcagta ttttttgaaa ttttttctaa aatttttaaa
     1801 gctttaagca aatcttgctt tggaataaaa cctgatttaa aaagatctaa aatgcaaatt
     1861 tgagcatttt gaatactaaa aatatccact cttaaatcaa tttttttaca aagttcttga
     1921 aattttttca agagaaaata tctttcataa ttatctttat taacacttaa aataatagca
     1981 tattcagcta tatcaagctt atttttatct tgaaatttag catcaaaatc caagaattga
     2041 agttcatttt gccaaatttt ttggaacaat tctttcataa tcttcccctt aaaaagggga
     2101 aagatttatt tatttctttg agcgacaagt tgtcttctca tataagcgat tttactttgc
     2161 aaaggtaatt ctttaggaca attatcttca caagcaagca atgacatgca accaaaaaca
     2221 ccatcatcat cgccaactaa ttcataaaaa tcttctacag ttctatgatc gtgtggatct
     2281 tgtaaatatc tagccgttct taaaagtcct gtagcggcta tgaaatttgg acgcataagt
     2341 ttagttgcac aagaagctac acaaattcca cactctatac aacgatcaag ttcaaaagtc
     2401 tcatctgcaa cttcaggttc aatgcgttct tcaagcttag aaatatcagt ttctttttca
     2461 ttatgcaccc aactttcaac acgcttacac atatcttcaa accattcgcc tgtattcaca
     2521 cttaaatctt taatatgtct aaatgctggc ataggcataa gctctatcac tccatcaaga
     2581 cagtcttttg tcaaagtttt acaagcaagt tttggtactc cattaatcat catcgcacaa
     2641 gatccacaaa tccctgcacg acaaacaaag tcaaaactca aatctgcatc cattttttca
     2701 cggattaaag tcaaacatac aaaaaccgtc ataaaaggag tttcttcaag ctcataagtc
     2761 acaaaatgtg gtttagaaat tttgcttaaa ggattgtatt taaatgcctt tattgtcaac
     2821 tttctactca taatcaactc ctattctttg gtttggcgct ttatatttag cttgtaattc
     2881 ataaggcatt aaagcgtttt gaatttcata acgacccctg ccctcagctt ccattttttc
     2941 acggatagca tccacttcag cttgacgttt ttcgcttaaa ggattctcta tgatatttcc
     3001 tttagcaccg tatccacgga atgccggtgg aatttccatt ttcataatat caagttcttc
     3061 gtattctatg cgtggtaaag tttctccttc tacccaaaaa gtattagttc ttttcatcca
     3121 atttaaatca tctctttttg gataatcttc tctataatgt gctccacgac tttctgttct
     3181 taaaagcgct ccataagcta cacaaagtgc aatttttaac attcttggaa ctctatatgc
     3241 ttcttcaagc tctggattag cacaatcaag ttctttacaa tgtactttca catcttgaga
     3301 atctttataa agtttttcaa gctcatcaac tgcttctttt aaaccttcac ctgttctaaa
     3361 gatcgctact ttatcccaca tgatttcttt cattctattt ttgatttcaa aaacattata
     3421 tttaccttct ttatccacta aagatttgag atactgatat tctttactca agaaatcttt
     3481 taccacattt gtatcaatca cttcaccatt attcttacaa taatctgcaa aataatctcc
     3541 tactatcata cctgctacaa cagtttctgc acatgaattt ccacccaaac gattaaatcc
     3601 gtgcatatcc cagcaagctg cttctccaca agcaaaaagt ccatttaacc attgactttc
     3661 acctgttggc ttagttctaa ttccacccat ggaataatgc tgcattggca aaacaggcgc
     3721 ccaacctttt ggaccctcat ctgctggatc aataccattg aaagttttac aaatatcttg
     3781 tacatcacga agattttttt ccacatgtgc acgaccaagt atagagatat caagccataa
     3841 atgatcccca taaggactct ttacgccttt gcctttacga atgtgctcca tcattctacg
     3901 acttacaaca tcacggcttg caagttcttt tttctctggt tcataatcag gcataaaacg
     3961 gtatccatcc acatcacgca aaattccacc atcaccacga caaccttcag taagcaaaat
     4021 accgcttggt acgatagggg ttgggtgaaa ttgcactgct tccatatttg aaagtctaca
     4081 aagtcctgtt tcaagagcaa tagctgcacc tgttccttcg caaattaccg catttgtagt
     4141 ttgtttataa attctaccat aaccacctgt tgctatcata gttcctcttg caatataagc
     4201 aattaattgg ccattggtta aatctctagc aatcacacct aagcattttt taccatcatg
     4261 gataattctt actgcttcca ttctatcaat gatttttact tgatgtttaa tggcttcatt
     4321 tgctacacca taaagcatac aatgacctgt tgcatctgca atatagcaag ttctccattt
     4381 tttagttcca ccaaaatctc tagcattaat aagaccatgt gcctcttctt tctcttcaat
     4441 cacagttttt tgtgcgttga ttacaacagt tcttggtcct ttagttactc tagtccaagg
     4501 cacaccccaa gctgcaagct cacgcaccgc ttttggcgca gtttgtgcaa acattcttgc
     4561 tacttcttga tcacagcccc aatcacttcc ttttaccgta tccgcaaaat gaagatcttc
     4621 gttatcaccc tcaccttttg cgccatttcc taaacttgct tgcatgcccc cttgcactgc
     4681 tgcagagtga gaacgcttta ctggacaaat acttaaaagt gttacacttt gaccgctctt
     4741 tgctacctca atagctgccc taagacctgc taatcctccg cctattacca aagcatcact
     4801 atattgtata ttcataattt gctccattgt agttttttat cattgcagta gtttgatttt
     4861 gatagttttc ataacctatt tttataaatg ctgcaagact taacacacct aaaactagga
     4921 aaaaaatact aattacccat ttagcaactt taagtttttt acgactttct tttatatttt
     4981 ttccttcaaa ccaaccccat ttaacacaaa gcctataaag acctatactt ccatgaagct
     5041 caacacacac taaaagaaca gcataaaaaa gccacataaa atgacttaca accctatctc
     5101 ctgacatatc actactgatc ttatctgcat tagttacaat aaaaataaga tgggcagaac
     5161 ctaagaaaaa cataataaaa cctgtaaaag cttgaaccca ccataatgaa gtatcactat
     5221 gattcatttt tttgctatgt gttcttagta tttgatactg acggtaatta ataggaaatt
     5281 ttctcattgc aagtaaagca tggacgaaaa aaaccactaa aacacaggcg gctagaaatg
     5341 aagtaagata actcataaca ggattatcat aaacaaattt taattccaag aaatgcacta
     5401 cagaattaaa aaaatcctcg ctaactaaaa ttgtagaaac aaaaagcata tgcacccaca
     5461 taaaaagacc taaaaaaagc cctgaagcgc tttggataaa gtctaatttc gcaggcattt
     5521 tgctcttttt gccttcaatg ctcctaccca aataaccttc gataagctca ctcatcttta
     5581 ctcctttata aaaagaaatt aaaaaacatt tcattatatt acaaaagtct ttaagttaga
     5641 ttaaatattt acttttttaa attttatata aacataaact aacaaagcca ctataaacat
     5701 tattaaactt aaaatttgcc ccatactcat accccataaa acaaaaccta ttccaaaatc
     5761 aggttcacga taaaattcac acataaatct tgctaaggaa taagcgccag cataaacaag
     5821 aatcaattcc ccttgaaaac tttgtttaaa tcttgctaaa taaactatga taaaaactac
     5881 aataccctct aaaaatgctt cataaagctg tgatggatga cgtaatactc catcaacata
     5941 aattccccaa ggcacatttg taatgcggcc aaaaagctct tgatttaaaa aatttcctat
     6001 gcggccaaaa acataagcta atgggacact taaagctact aaatcaagaa aaatccaagg
     6061 atttgtttta tattttttgc aaaataacaa agtagctatc aaaaatccta tgattgctcc
     6121 atgatagctc atacctcgaa tacctacaaa ttcaccatca atataaggat taaaaatctg
     6181 ccaaggatgg gtaatataat acatagtatt tgcatcataa attaaaatat atccaagtct
     6241 tgcacctaaa ataaccccta tttcaaccca aataaaataa ctgtctaagt atttttcatc
     6301 aatatttaat ttaaattttc ttacaaaaaa tttagccaaa aataaagcta aaagcaaagc
     6361 tatgacatac ataataccat accaatgcac ttttaaacca aagatagtaa aagctataac
     6421 attaaaattt gaataaatat gttgccaaaa ttccatatat ctttcctaat tttttatttt
     6481 taaaaatata gcaaaaaaac tttaacttgc tataattaac acaaatacat taaaataagg
     6541 taaaaaatga aaaaatatat tttgcttgct agtatgttga ttttaacagc ttgtggagga
     6601 acaagtagta attttgttaa cctttctatg ccaaatttta aacctcaagt tccaacgaaa
     6661 atcgaaccta ttgattctgg agtaagtatt actcttgaac ctattaatat agaacaaaat
     6721 aacaattatt ctgattattt tgaaaattca gtacttaaaa ttcgcataga aaaagaaatt
     6781 gagcttttaa aacaaaattt agaagaacag atcaaaacca ttgttcaact aaaaggctac
     6841 aaaatagtta acaccaatcc agattacact cttaaaagct taattagtgt ttatacagaa
     6901 gaaaaaaatg cgcaaaaaac aagtaatttt atgaatggag attatgtaaa atccaatcta
     6961 ggtataaatt ttaaaggtaa gatagatttt atagatgcac acaatccaca aaattcaact
     7021 aatctttcaa gtaatactaa attagattct ttagttacac ttagttatcc tattaaaaat
     7081 gacgatgggg ttaatatgtt caaaactact atttccactg taccaactca acttaacaag
     7141 ggcttagaac aacctgcttt tgaaattgat aaaagttttc tagcttttta taaaaataca
     7201 ttaactacac tttataacaa tcttccaaaa gcaacagaca taggcaaaac catacctaat
     7261 acaaacaatg attttaataa ctttgatggc aatgccactt ttgaagaaag cctacctcaa
     7321 acaaactcta atcaaaataa tacaattaaa aacgcaccta cacaaaacat ttctataaat
     7381 ccatctacaa caaatcaaaa caatggaagc aaaaatcaag atggagttga aatatttaaa
     7441 taataaaact
//
LOCUS       DAPWAA010000071         7384 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.071, whole genome shotgun sequence.
ACCESSION   DAPWAA010000071 DAPWAA010000000
VERSION     DAPWAA010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7384
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.071"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..185
                     /locus_tag="RTF91_001489"
     CDS             <1..185
                     /locus_tag="RTF91_001489"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944356.1"
                     /translation="NPKIEEVLSLDVINQNINLEDLKKQYNILTDATQVKLENINEIS
                     NIKFKNIEKITQYLMK"
     gene            158..1480
                     /locus_tag="RTF91_001490"
                     /pseudo
     CDS             158..1480
                     /locus_tag="RTF91_001490"
                     /inference="COORDINATES: protein motif:HMM:NF024565.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
     gene            1486..1698
                     /locus_tag="RTF91_001491"
     CDS             1486..1698
                     /locus_tag="RTF91_001491"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944357.1"
                     /translation="MKNIINEYFANDIQHKAFYRYINRESHSDRENISDVKEIDINMF
                     FEAFENFFKKLEYEEHYKKMMGENND"
     gene            1691..4606
                     /locus_tag="RTF91_001492"
     CDS             1691..4606
                     /locus_tag="RTF91_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDZ4944358.1"
                     /translation="MTNYQEKDLENFIEAYLLENNDYIKRTNENYDKNLCIDTELFEN
                     FLQATQSVALEELKKRCGQNYKKELFDCIFSQIKTKGIVKALQSYVEIKGIKIYLAFS
                     KPNTSANEESVKKYEQNTLSIIRQLHYSTQNKNSLDMVIFLNGLPLITIELKNHFTGQ
                     NVFHAIDQYKKDRNPKEAIFSLTIVHFALDHDLCYMSTKLDQDATTFLPFNLGLNNGS
                     GKIGLANGAGNPPSDGIKTAYLWEKIFKKDTLLNLFFNFVQVVKKKNEEIIIFPRYHQ
                     FDAVEKLLAHAKENGTGQRYLIQHSAGSGKSNSISWLAHNLVSLHRLEKNIFDSIIVV
                     TDRKVLDRQIRENVKSFSQTKNLVEAITHGSKQLKNALEEGKKIIITTIQKFPFILDE
                     IKTLKSKTFAIIIDEAHSSQSGSNAQKMAEAIRDKSSDENQNLDDEILEIIKNKKLQS
                     NASYFAFTATPKPKTLEMFGMPCDVDGEQNFIPFHLYSMKQAIEEGFILDVLKGYTTY
                     KSYYKIISCTNDNPKYDKKRASAKLKAYVQNNINTIEQKSQIMCEHFFQNSFKKINGK
                     AKAMVVTSSRENAVKYYLVFREYLRKNYPHFKAIVAFSGEVNLEGEIYSESGLNGFAE
                     NVLKDEFKKDEYRFLIVAEKYQTGFDEPLLHTMYVDKTLSGVSTVQTLSRLNRTCKNK
                     ENTFVLDFVNTHEDIAKSFSVFYEQTYLSEATDDNRIFDLKANLNEYEIYTQEQIDDF
                     TDAILRKEKENVIHAKLDIMLSRFDQKSDDEKLDFYNKAKTYLKEYSFLAQILPYEDI
                     ELEKLYILLKKLVSKIILPKSQDLAKGILDNVDFDSYRLLLDKTQDIILQGNGELKPS
                     FADGSSKSVEAELAELSNIIKDFNNKYANIDFNESDKIAKILYDIKDDIVKNERIRET
                     FDKSDMQNSRIEFDTLLKDKIQDILELNLELFKQFNQNIEFKDKIANTMFNMVCNDF"
     gene            4652..5671
                     /locus_tag="RTF91_001493"
     CDS             4652..5671
                     /locus_tag="RTF91_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDZ4944359.1"
                     /translation="MSVDFFKTFDLSSKERLKAKKVQGKKYEIFLNENEQSFITPKVS
                     FKEIFRYYYLYPKNAKPTSKLPFFKPNLNYFHTPHITWLGHSSLFVSFKEYKILIDPV
                     FNTHASPIFFINKVFKNAPVYNVNDFDEIFAVIITHSHFDHLDKKSVKALKDKAKFFI
                     TPLKIGNYLKSYGVSKKKIIELDWWSGVEFDELKIIATPAQHSSSRGDGKNKTLWASF
                     VMQFPNKRIFLSADGGYFTHFKKIGEYFGGFDLACLESGQFNTAWPFSHSFPKQILEE
                     AKDLNTKAVMPIYWGRFLAGSHAWNEVVEFLHKNLSLPLIAPKMGESYEIGTKFKQDF
                     WWKEG"
     gene            5742..6083
                     /locus_tag="RTF91_001494"
     CDS             5742..6083
                     /locus_tag="RTF91_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDZ4944360.1"
                     /translation="MKITQWSKAEFYPKEVKINILIDDEHSKEIQILLAKGSVMKEHK
                     APFAIRVQVLSGKIWFEVQEQRFQLNVLDMISLEANMSHSLGGLEDSIIRLSLNKLDK
                     VQRINAVLKKP"
     gene            complement(6188..7357)
                     /locus_tag="RTF91_001495"
     CDS             complement(6188..7357)
                     /locus_tag="RTF91_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDZ4944361.1"
                     /translation="MLTKRSQVLEESITLAITALANELKAKGENIISFSAGEPDFDTP
                     QTIKNAAITAIEKGCGKYTAVAGISEVLKAIQTKLKKDNNLDYETSEIITNVGAKHSL
                     FECIECLVEKDNEVIIPSPYWVSYPEMVKFAGGKPVFIDGLEENGFKITAEQLKKAIT
                     PKTKVLMLNSPSNPVGSIYSKEELTQIAKVLEGTQITVLSDEMYEKLRYDGFDFIAFA
                     SISEDALKRTVTINGLSKCGAMPGWRFGYMASKNKALISAVKRLQGQSTSNICSITQH
                     AAIPALNGECDQDIEKMRQAFEKRRDLALSMLKQIPNISVYKPEGAFYLFVNIQKIEK
                     DSMKFCQKLLEQEKVAVVPGIGFGMDGYFRLSYATSDDFIKKGLERIIKFIKNYK"
BASE COUNT         2893 a          982 c         1146 g         2363 t
ORIGIN      
        1 taaatccaaa aatagaagaa gttttatctc ttgatgtaat aaatcaaaat ataaatttag
       61 aagacctaaa gaaacaatat aacattctta ctgacgcaac acaagttaaa ttagaaaata
      121 tcaatgaaat ttcaaatata aaatttaaaa atatagagaa aataactcaa tatttaatga
      181 aataattgta ggtaatcaag atagcgttat tgcaaattta atcaataagc taggaaatgg
      241 agattgggtg aaagatggtt ttgataagta tattttgcaa gattctaaaa cttgtccatt
      301 ttgtcaaagc gataatacaa tcactccaaa atttaaaagc gatttagaga attattttga
      361 taaaacatat gaagaaagta taaaaaaaat tgaaaaatta aatgatgatt atcaaaattt
      421 attttcaaat ataccaagca tagaaacttt ttatagaaga gatattttag atgataaaga
      481 tttggaattt gaaaaattat attctcaagt aaaatcaaaa cttgaagaaa atattagaaa
      541 aattcaagaa aagattaaag agcctagtaa gaaaatagaa ttagaaaaaa ctgatgaagt
      601 gtttcaaaat tttaatgatt atatcaaaca aatacaacaa aaaatcatag aatttaacag
      661 caagttagat aattgggaaa atgagaaaga aaaattagaa aaacaatttt gggaatttgt
      721 gatttttgag aaaaaagaga ttgtagaaaa atataaaaaa gataaaagtg aaaaagaaac
      781 aaacaaacaa gctttagata aagaaaataa aactatcaaa gataatatac aaaatataga
      841 aaatactata aaagaaaagc aaaaaggagt agttaatatt caagaagcag ttgataaaat
      901 aaataattat ttagaagatt taggaatttt aagtttttgt atcaaaacca aagataatga
      961 aaaacaagaa tacattatag taagagaagg agaggataag cctagcttca aaaccttaag
     1021 tgaaggtgaa aaaactttaa tttcattttt gtatttttta caactctgtc aaggtaaaaa
     1081 agaaaaaaat gaagcaattt tagataaaat tatcgtgatt gatgatccta tttctagtct
     1141 ttcttttaat tatgtttatg atatagctca gcttataaaa catacttttt ttaacaatgc
     1201 tttatataaa cagattttta tttttacaca taatttatat ttttatcatg aattttttaa
     1261 acttagtaaa gatataaata aaaaaattag ttcatttaga atatttaaaa atcaaaataa
     1321 ttattcttgt atcagtgttt tggataatga aatcttaaat gattatcaag cttattggca
     1381 aatcctaaga gattataaac aacaaaaagt acataaagca attataccta ttacaatgag
     1441 gaatatttta gaaaattttg taggttttat atatatataa aaaaattgaa aaatattatt
     1501 aatgaatatt ttgcaaatga catacagcat aaagcttttt ataggtatat aaatagagaa
     1561 tctcattctg atagagaaaa tatatcagat gtaaaagaaa ttgatatcaa tatgtttttt
     1621 gaagcgtttg aaaatttttt taagaaatta gaatatgaag aacattacaa aaagatgatg
     1681 ggagaaaata atgactaact accaagaaaa agatttagaa aatttcatag aagcatattt
     1741 gttagaaaat aatgattata tcaaaagaac aaatgaaaat tacgataaaa atctatgcat
     1801 agacacagag ctttttgaga atttcttaca agctacgcaa agtgtagcac ttgaagagct
     1861 taaaaagcgt tgtgggcaaa actataaaaa agaacttttt gattgtattt tctcacagat
     1921 taaaactaaa ggcatagtca aagccttgca aagctatgtg gaaatcaaag gcatcaaaat
     1981 ttacctagcc ttttcaaagc caaatactag tgcaaacgaa gaaagcgtga aaaaatacga
     2041 gcaaaacacc ctttctatca tacgacagct tcactatagc acgcaaaata aaaactccct
     2101 tgatatggtg atctttttaa atggcttgcc ccttatcacc atagagctta aaaaccattt
     2161 caccgggcaa aatgtctttc acgctataga tcagtataaa aaagatagaa acccaaaaga
     2221 agctatattt agccttacta tagtacattt tgcattagat catgatcttt gctatatgag
     2281 tacaaaatta gatcaagatg cgactacatt tttacctttt aatcttggtt taaacaatgg
     2341 tagtggcaaa ataggcttag caaatggagc aggcaaccca ccaagtgatg gtataaaaac
     2401 agcttatttg tgggagaaaa tctttaaaaa agatactttg ttaaatttat tttttaattt
     2461 tgtgcaagtt gtaaaaaaga aaaatgaaga aatcatcata tttcctagat accatcaatt
     2521 tgatgcagta gaaaaactac tcgcccatgc aaaagaaaac ggcacagggc aacgctattt
     2581 gatccagcat agtgcaggaa gtggcaagag caattctata tcttggcttg cacataatct
     2641 cgtaagctta catagacttg aaaaaaatat ctttgattct atcatcgtag taaccgatag
     2701 aaaagtgctt gataggcaaa taagagaaaa tgtaaaatcc ttttcacaga caaaaaatct
     2761 agtcgaagct atcactcatg gaagcaaaca gcttaaaaat gctttagaag aaggtaagaa
     2821 aatcatcatc acaaccatac aaaaatttcc ttttatttta gatgaaatca aaactttaaa
     2881 aagcaaaact tttgctatca tcatcgatga agctcactct agtcaaagcg gaagcaacgc
     2941 tcaaaaaatg gcagaagcca taagggataa aagcagtgat gaaaatcaaa atttagatga
     3001 tgaaatttta gaaatcataa aaaataaaaa actccaaagc aatgcttcgt attttgcatt
     3061 tactgctacg cctaagccaa aaaccttaga aatgtttggt atgccttgtg atgttgatgg
     3121 agaacaaaat tttatccctt ttcatcttta ctccatgaaa caagccatag aagaaggctt
     3181 tatactagac gtgctaaaag gctatacgac ttataaaagc tactataaaa tcatatcttg
     3241 cacaaatgac aatccaaaat acgataaaaa aagagcaagt gcaaaactaa aagcttatgt
     3301 acaaaacaat ataaacacaa tcgaacaaaa atcacaaatc atgtgtgagc atttttttca
     3361 aaatagcttc aaaaaaataa atggtaaagc aaaagctatg gttgtaacaa gctcaagaga
     3421 aaatgctgta aagtattatc ttgtttttag agagtattta agaaaaaatt atccacattt
     3481 taaagctatc gtagcttttt caggtgaagt aaatttagag ggtgaaattt atagtgaaag
     3541 tggtttgaat ggttttgcag aaaatgtttt aaaagatgaa tttaaaaaag atgagtatcg
     3601 ttttttaatc gttgctgaaa aataccaaac cggatttgat gagccgttat tacataccat
     3661 gtatgtagat aaaacattaa gcggagtaag tacagtgcaa accctatcaa ggctgaaccg
     3721 aacttgtaaa aataaagaaa acactttcgt gctagatttt gttaatactc atgaagatat
     3781 tgcaaaatct tttagtgtat tttatgagca aacttattta agtgaagcca cagatgataa
     3841 tagaattttt gatttgaaag caaatctaaa tgaatatgaa atttacaccc aagaacaaat
     3901 agatgatttt acagacgcta ttttaagaaa agaaaaagaa aatgtcattc atgcaaaatt
     3961 agacataatg ctaagtaggt ttgatcaaaa aagcgatgat gaaaaattag atttttataa
     4021 caaagcaaaa acttatctta aagagtattc ttttctagct caaattctac cttatgaaga
     4081 tatagaactt gaaaaacttt atatactact taaaaagctt gttagtaaga tcatcttacc
     4141 taaatcacaa gatttggcta aaggaatttt agataatgta gattttgata gctatcgttt
     4201 gttgcttgat aaaacacaag atattatttt acaaggaaat ggagaattaa aaccttcttt
     4261 tgcagatggg tcaagtaaaa gcgttgaagc tgaactagca gagctttcaa atatcatcaa
     4321 agacttcaac aacaaatacg caaatataga ctttaacgaa agtgataaaa tagctaaaat
     4381 cttatatgat ataaaagatg atatagtaaa aaatgaaaga atacgcgaaa ctttcgacaa
     4441 atcagacatg caaaattctc gtattgaatt tgatacactt ttaaaagata aaattcaaga
     4501 catcttggag ttaaatttag aactttttaa acaatttaat caaaacatcg aatttaaaga
     4561 caagatagca aatacaatgt ttaatatggt ttgtaatgat ttttaaaaaa aacagaatta
     4621 ccattaaagt cgtcaaaaag gataaatgtt tatgagtgta gattttttta aaaccttcga
     4681 tctgtctagc aaagaacgcc taaaagctaa aaaagtgcag ggtaaaaaat atgaaatttt
     4741 tctcaatgaa aacgagcaaa gttttataac tcctaaagtg tcttttaagg aaatttttag
     4801 gtattattat ctttatccta agaatgctaa gccgacttct aaactccctt tttttaagcc
     4861 aaatttaaat tattttcaca ctccacatat cacttggctt gggcattctt cgctttttgt
     4921 aagttttaag gaatataaaa ttttaattga tcctgttttt aatacccatg cttcgcctat
     4981 ttttttcatc aacaaggttt ttaaaaatgc acctgtttat aatgtaaatg attttgatga
     5041 aatttttgcc gtgattatta cgcattcgca ttttgatcat ttagataaaa aaagtgtaaa
     5101 agctttgaaa gataaagcta aatttttcat cacgccttta aagataggga attacctgaa
     5161 aagttatgga gtgagtaaga aaaaaatcat agagcttgat tggtggagcg gagtggaatt
     5221 tgacgagctt aaaattatcg caacaccagc acaacatagc tcaagtcgtg gtgatggtaa
     5281 aaataaaacc ctttgggctt cttttgtaat gcaatttcca aataaacgca ttttcttaag
     5341 tgcggatgga gggtatttta cacattttaa aaaaataggt gagtattttg gaggttttga
     5401 tttagcttgt cttgaaagcg gacaatttaa taccgcttgg cctttttcac attcttttcc
     5461 taaacaaatt ttagaagaag caaaagatct taacacaaaa gctgtaatgc ctatatattg
     5521 ggggagattt ttagcaggaa gtcatgcttg gaatgaggta gtagaattcc ttcataaaaa
     5581 tttatcttta ccacttattg caccaaagat gggcgaatct tatgaaatag gaaccaaatt
     5641 taaacaggat ttttggtgga aagaaggata aaattcacat aagtttatag tctgtatttt
     5701 ggcttttgct acaattttat aaaactaaaa aaggagattt tatgaaaatt actcaatgga
     5761 gcaaagctga attttatcca aaagaagtga aaatcaatat tttaatcgat gatgagcaca
     5821 gtaaagaaat tcaaattttg cttgccaaag gtagtgtgat gaaagagcat aaagctccat
     5881 ttgccatccg tgtacaagtt ttaagtggta aaatttggtt tgaggtgcaa gagcaaagat
     5941 ttcaattgaa cgttttggat atgataagct tagaggcaaa tatgtctcat tctttaggag
     6001 gattagagga ttcaataata aggcttagtc ttaataaact agataaagtc caaagaataa
     6061 atgcagtact taaaaaacct tgattttagt gttttgattt gaatttttgg tttaataggg
     6121 tttaaattaa gtcagttgaa tttgatttaa tcaaataaga ttgataattc taggttttaa
     6181 cctagaatta tttataattt ttaatgaatt ttattattct ttctaaacct tttttaatga
     6241 aatcatcact cgtagcataa gaaagtctaa aatatccgtc catgccaaaa cctattcctg
     6301 ggacaacggc aactttttct tgttcaagta atttttgaca aaatttcata gagtcttttt
     6361 ctattttttg tatatttaca aaaagataaa aagcaccttc tggtttataa acactaatgt
     6421 ttggaatttg cttaagcata cttaaagcta aatcacggcg tttttcaaag gcttgacgca
     6481 ttttttctat atcttggtca cattctccgt ttaaagcagg aatagctgca tgttgagtga
     6541 tggaacaaat atttgaagtg ctttgtcctt gaagtctttt aacagctgaa attaaggctt
     6601 tatttttgct tgccatataa ccaaaacgcc accctggcat agctccacat ttactaagtc
     6661 catttattgt tacggtgcgt tttaaagcgt cttcacttat gcttgcaaaa gctataaaat
     6721 caaaaccatc atagcgaagt ttttcataca tttcatcgct taaaacagtg atttgcgttc
     6781 cttctaaaac tttagcaatt tgagttaatt cttctttgga ataaatcgaa cccacgggat
     6841 ttgaaggaga gtttaacatt aaaacctttg ttttaggtgt gatagctttt tttaattgct
     6901 cggcagtgat tttaaagcca ttttcttcta atccatctat aaacacaggt tttccacctg
     6961 caaattttac catttcagga tagcttaccc agtaaggact agggataatc acttcattat
     7021 ctttttccac taagcattct atgcattcaa aaagagagtg ttttgcacct acgtttgtga
     7081 tgatttcact cgtttcatag tcaagattat tatctttttt aagtttggtt tgaatagctt
     7141 ttaatacttc agaaattcct gcaacagcag tgtattttcc acatcctttt tcaatagcag
     7201 ttatagcggc atttttaata gtttgtggcg tatcaaaatc aggctcacct gctgaaaaac
     7261 taatgatatt ttcgccttta gctttaagtt cgttagcaag tgcagtgata gctaaagtga
     7321 tagattcttc taaaacttga gatctttttg taagcatttt tcaatcctta aaataatttt
     7381 ttgt
//
LOCUS       DAPWAA010000072         7381 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.072, whole genome shotgun sequence.
ACCESSION   DAPWAA010000072 DAPWAA010000000
VERSION     DAPWAA010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7381
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.072"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..767
                     /locus_tag="RTF91_001496"
     CDS             <1..767
                     /locus_tag="RTF91_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF814 domain-containing protein"
                     /protein_id="HDZ4944362.1"
                     /translation="QIKSLKLAQVDKKIQNLQELFSSLDEENSLLLKALEYRKRADVL
                     FANLSVLKDYEREFKLDDFEGKDLEFKLEFSPKQSANLYYKNAKKLEQKAKNLNIQRL
                     NLKEKLDFTLSLKELLFQAKSEIELEILLPKKIAKKNQDHKQEDLVANFYFNEFKICV
                     GKNEKGNEFLLKNAKKDDLWLHVRDIPSAHALIISNKQKISLDVLEFAARLCVSFSKL
                     KKGSYWVDYTLKNFVKVQQKAFVNYTNFKSINIIKD"
     gene            769..1107
                     /locus_tag="RTF91_001497"
     CDS             769..1107
                     /locus_tag="RTF91_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944363.1"
                     /translation="MPVSPLGNVNYVNQNMAYPATQVSNELAKEGFAATLNMAEFNEK
                     EKTLNKLEKVNETHEIKEEIKEKAEQEEKKKKHNQETKASDDEKSEEDEFKDPNFKDA
                     QSIHRLDISI"
     gene            1116..1841
                     /locus_tag="RTF91_001498"
     CDS             1116..1841
                     /locus_tag="RTF91_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDZ4944364.1"
                     /translation="MFNTARIISALVMIAAIIIIALVDQFFINFIVFAVLLYLSFSEA
                     KKLFALENISIIPLAIAFILGSLSHKALLFGVLTLLLVVGYLVYKKTSLKPALIYIYP
                     SLPILALWQVYLDQGMFALFWLIIIVTAYDSGAYFIGKLMGKIPFSPTSPNKTLEGVV
                     GGLICASIIGTFLGIFVYSFWFSLLCSFLAAIFAVIGDLLESYFKREAGVKDSGDLIP
                     GHGGILDRIDAVIIAAFVMVALL"
     gene            1838..2908
                     /locus_tag="RTF91_001499"
     CDS             1838..2908
                     /locus_tag="RTF91_001499"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDZ4944365.1"
                     /translation="MILFGSTGSIGVNALKLAALKNIPISALACGDNITLLNEQIARF
                     KPKFVAIKDRKNKHLVKHDKVFIGQEGLEQILTECQDKLLINAIVGFAGLKSTLKAKE
                     LDKNIALANKESLVVAGNFLKGAKFLPVDSEHAALKFLLEGKKNIAKLYITASGGAFY
                     KHKIKDLNQVSIKDALKHPNWNMGAKITIDSATMVNKLFEIIEAYHLYDFKEIDALIE
                     PRSLVHAMCEFKNGASTAYFSKADMKLAISDAMFKKHDTPILEAVDFSKMPALKFHQI
                     STKKYPIFKLKNAFLKEPNLGVVINAANEVGVSNFLENKSGFLDIAKYIFKALDHFGV
                     PKISSIEEVFEYDFKTREYLRN"
     gene            2911..4305
                     /locus_tag="RTF91_001500"
     CDS             2911..4305
                     /locus_tag="RTF91_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deacylase"
                     /protein_id="HDZ4944366.1"
                     /translation="MKFFLTILFFITSIFALGLDFSVGENGKSLDDNNTVLIFGGIQG
                     DEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIKRSRGNNGDLNRKFASISPKDPD
                     YKTVQRIKELILLPEVSMVINLHDGWGFYKPIYIDAIQNPKRWGNSSVIDTSEINASK
                     YPDLENIAIQTVNSVNSSLADSKHAYHLKNTKTQELGDTEMLKALTYFVISNHKAAFA
                     NEASKNLPVNLRAYYHLLAIENYLKTAGIEFSRDFELTPQGVNKAINRELEVKLFNDR
                     ILLSLKNPRKVVKYVPFPVNKELNYNTSNELTAVIAEGNSFYIQYGNRFQTRLYPEYL
                     EFSNAFNEVAFQVDGNETIVPFATKVKVKENFLVPKIANVRVNIIGFDYGKDESGILV
                     HKKNMQTQYSLDMAGKIYRVEFYELRWANLQQFLEANTNSKLIKNVKNLDLNTLKTAR
                     AKDKFLGSILVEFE"
     gene            4302..5309
                     /gene="tsaD"
                     /locus_tag="RTF91_001501"
     CDS             4302..5309
                     /gene="tsaD"
                     /locus_tag="RTF91_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDZ4944367.1"
                     /translation="MKNLILAIESSCDDSSIAIIDQNTLECKFHKKISQELKHSVYGG
                     VVPELAARLHSEALPKMLKQCKKYFENLCAVAVTNEPGLSVSLLSGISMAKTLASALD
                     LPLIPINHLKGHIYSLFLEEKISFDMGILLVSGGHTMVLYLKDSGNLELLASTNDDSF
                     GESFDKVAKMMNLGYPGGVIIENLANKAKLKNISFNVPLKHSKELAYSFSGLKNAVRL
                     EILKQENLSDDIKAEIAYAFENTACEHIIDKLEKIFNLYKFKNFGVVGGASANLNLRS
                     RLQNLCQKYNANLKLAPLKFCSDNALMIARAAVDAYEKKEFISIEEDILSPKNKNFSR
                     I"
     gene            5310..5825
                     /locus_tag="RTF91_001502"
     CDS             5310..5825
                     /locus_tag="RTF91_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDZ4944368.1"
                     /translation="MRKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNL
                     KTFINDISIYTLKNDRLNSIKMMSNVSGVENVDLNNFSGVKEVNFRVGDDKECLKLVF
                     INKADFILMGISSNKASKNSIINAVNQNQEDLENIDFASTSSNKACVILSKSEHFKNL
                     ASKTYLLIGGR"
     gene            5825..7074
                     /locus_tag="RTF91_001503"
                     /pseudo
     CDS             5825..7074
                     /locus_tag="RTF91_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344730.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
     gene            7074..>7381
                     /locus_tag="RTF91_001504"
     CDS             7074..>7381
                     /locus_tag="RTF91_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944369.1"
                     /translation="MTILEKNIQALLSGVNEPLGNKLLNFIQNKTCSRFNMDENLNIY
                     DKTHNVFMYENLEEEVNYFYQSILEKTPRYPFVCIYGIGNALLIKNLAKHYKHLFVFE
                     "
BASE COUNT         2662 a          910 c         1318 g         2491 t
ORIGIN      
        1 atcaaataaa aagtttaaaa cttgcacaag tggataaaaa aatacaaaat ttacaagaac
       61 ttttttctag tttagatgaa gaaaattctt tgctcttaaa ggctttagaa tacaggaaaa
      121 gagctgatgt gttgtttgca aatttgagtg ttttgaaaga ttatgaaaga gaatttaaac
      181 ttgatgattt tgaaggcaaa gatcttgaat ttaaacttga atttagtcct aaacaaagtg
      241 ctaatttgta ttataaaaat gctaaaaaat tagagcaaaa ggctaaaaat ttaaatatac
      301 aaagattaaa tttaaaagaa aagttagatt ttactttgag tttaaaagaa ttattatttc
      361 aagctaaaag tgaaatagaa cttgaaattt tattgcctaa aaaaatagca aaaaaaaatc
      421 aagatcacaa acaagaagat cttgtggcaa atttttattt taatgagttt aaaatttgtg
      481 tgggtaaaaa tgaaaaaggt aacgaatttt tacttaaaaa tgccaagaaa gatgatttgt
      541 ggcttcatgt aagggatatt cctagtgcac acgctttgat tatatcaaac aagcaaaaaa
      601 tcagtcttga tgtgctagaa tttgctgcaa gactttgtgt aagcttttct aagttaaaga
      661 aaggttcgta ttgggtcgat tataccttaa aaaattttgt taaagttcaa caaaaggcgt
      721 ttgtaaatta tacaaatttt aaaagtatta atatcataaa ggattaaaat gccagttagc
      781 cctctaggaa atgtcaatta tgtaaatcaa aatatggctt atccagctac acaagtaagc
      841 aatgagcttg caaaagaagg ttttgcagct acgctaaata tggctgaatt taacgaaaaa
      901 gaaaaaactt taaacaagct tgaaaaagtc aatgagactc atgaaatcaa agaagagatt
      961 aaagaaaaag ccgagcaaga agaaaaaaag aaaaaacaca atcaagaaac taaagctagc
     1021 gatgatgaga aaagtgaaga agatgagttt aaagatccaa attttaaaga cgcacaaagc
     1081 attcatcgat tagatatcag tatataagga aaaatatgtt taatacagct agaattattt
     1141 cagctcttgt gatgatagca gctattatca tcattgcatt ggttgatcaa ttttttatca
     1201 attttatcgt ttttgcagtt ttgttgtatt tatcttttag cgaagcaaaa aaactttttg
     1261 ctttagaaaa tatttctatt atccctttgg ctatagcttt tattttagga agtttgtcgc
     1321 ataaagcctt actttttgga gttttgactt tgttattggt tgttggatat ttggtttata
     1381 aaaagacttc tttaaaacca gctcttattt atatttatcc tagtttacct attttagcac
     1441 tttggcaagt gtatttagat cagggcatgt ttgcactttt ttggcttatt attattgtta
     1501 cagcgtatga tagcggggcg tactttatcg gaaaacttat gggtaaaatc cctttttctc
     1561 caacaagtcc aaataaaact ttagaaggtg ttgtaggtgg tttgatttgt gcaagcatta
     1621 taggaacttt tttaggaatt tttgtttata gtttttggtt ttctttgctt tgttcatttc
     1681 ttgcagcgat ttttgcagtg attggagatt tgcttgaaag ttattttaaa agagaagcag
     1741 gtgtaaaaga tagtggagat cttatccccg gtcatggtgg tatacttgat agaattgatg
     1801 cggtgattat cgctgctttt gtgatggttg ctcttttatg atactttttg gaagtacagg
     1861 cagtataggg gtaaatgctc ttaaacttgc tgctttaaaa aatattccca tttctgctct
     1921 agcttgtggg gataatatca ctcttttaaa tgaacaaatc gcaagattta aacccaaatt
     1981 tgtcgccata aaagatcgaa aaaataagca tttagttaaa cacgataaag tttttatagg
     2041 gcaagaaggc ttagagcaaa ttttaacaga atgccaagac aagcttttaa ttaacgctat
     2101 tgtgggtttt gcagggctta aaagtacttt aaaagctaaa gagcttgata aaaatatagc
     2161 tttggctaat aaagaaagtc ttgtagtggc gggaaatttt ttaaaaggag ccaaattttt
     2221 acctgttgat agtgagcatg cggctttaaa atttctactt gaaggcaaaa aaaatatagc
     2281 aaaactttat attacagcaa gtggtggagc tttttataag cataaaataa aagatttaaa
     2341 tcaagttagc atcaaggatg ctttaaaaca tcctaattgg aacatgggag caaagatcac
     2401 tatagatagt gcaactatgg taaacaagct ttttgaaatt atagaggctt atcatctata
     2461 tgattttaaa gaaatcgatg ctttaataga accaagatct ttggtgcatg caatgtgtga
     2521 gtttaaaaat ggggctagca cggcgtattt ttcaaaagca gatatgaaac tagctatttc
     2581 agatgctatg tttaaaaaac atgatacgcc tattttagag gctgttgatt ttagtaaaat
     2641 gcctgcttta aaatttcatc aaatcagcac aaaaaaatat cctattttta agctcaaaaa
     2701 tgcattctta aaagagccaa atttaggtgt tgtgatcaat gcagctaatg aagtaggcgt
     2761 ttctaatttt ttagaaaata aaagtggatt tttagatatt gctaaataca ttttcaaggc
     2821 tcttgatcat tttggagtac ctaaaatttc aagcatagaa gaagtttttg agtatgattt
     2881 taaaacaagg gagtatttaa ggaattaaaa atgaaatttt ttttaacaat tttatttttt
     2941 ataacaagca tttttgcttt agggctagat tttagcgtgg gggaaaatgg aaaaagttta
     3001 gatgataata atacagtttt gatttttgga ggaattcaag gagatgagcc tggtggattt
     3061 catgcggcaa gtttgctttt gagtgattat aatatcacta aaggcaagat tatagtagct
     3121 ccaaatttag cttttgatag tatcattaag cgttcgcgtg gaaataatgg agatttaaat
     3181 cgtaaatttg caagcattag tccaaaggat cctgattata aaaccgttca gcgtattaaa
     3241 gagcttatct tacttcctga agttagtatg gtgatcaatc ttcatgatgg ttggggtttt
     3301 tataagccta tttatatcga tgcgatacaa aatcctaagc gttggggaaa ttcaagcgtg
     3361 attgatacga gtgaaatcaa tgcaagcaaa tatcctgatc ttgaaaatat tgccattcaa
     3421 accgtaaata gcgtaaactc ttcacttgcc gattcaaagc atgcttatca tcttaaaaat
     3481 accaaaactc aagaacttgg tgatactgaa atgcttaaag ccttgactta ttttgtgatt
     3541 tcaaaccata aagctgcttt tgcaaatgaa gcgagcaaaa atctacctgt aaatttaaga
     3601 gcttattatc atcttttagc tattgaaaat tatttaaaaa cagcagggat tgaatttagt
     3661 agagattttg aactcactcc acaaggggtt aataaagcta ttaaccgaga gcttgaagtg
     3721 aagcttttca atgatagaat tttgctttct ttgaaaaatc caagaaaggt ggttaagtat
     3781 gtaccttttc cggtaaataa agagctaaat tataatacaa gcaatgagct taccgctgtt
     3841 attgccgagg gaaattcttt ttatatccaa tatggcaatc gttttcaaac aagattatat
     3901 cctgagtatt tagaatttag caatgctttt aatgaagtag cttttcaagt agatggcaat
     3961 gaaaccattg tgccttttgc gaccaaggta aaagtaaaag aaaattttct tgtcccaaag
     4021 atagctaatg tacgtgtaaa tatcataggt tttgattatg gaaaagatga aagcggtatt
     4081 ttagttcata aaaaaaatat gcaaacacaa tactctttag atatggcagg taaaatttat
     4141 cgggtggaat tttatgagtt aagatgggcg aatttgcaac aatttttaga agcaaatacc
     4201 aatagcaagt tgattaaaaa tgtcaaaaat ttggatttaa atacccttaa aacagcaaga
     4261 gcaaaagata aattcttagg ttctatttta gtggaatttg aatgaaaaat cttatcttag
     4321 ctatagaaag ttcttgtgat gatagttcta tagctatcat tgatcaaaat acccttgagt
     4381 gtaaatttca taaaaaaatt tcccaagaat taaagcacag tgtttatggc ggagtagtgc
     4441 ctgaacttgc tgcaagactt catagcgagg ctttgccaaa gatgcttaaa caatgcaaaa
     4501 aatattttga aaatctttgc gctgtagccg taacaaatga accaggactt agtgtttctt
     4561 tacttagtgg catttctatg gcaaaaactt tagcaagtgc tctagatttg cctttaatcc
     4621 ctataaatca tcttaaaggt catatttata gtcttttttt ggaggaaaaa atttcctttg
     4681 atatgggaat attacttgtt agtggtggtc atactatggt gctttatctt aaagatagtg
     4741 gaaatttgga gcttttagca agtacaaatg atgatagttt tggagaaagt tttgataaag
     4801 tagctaaaat gatgaattta ggttatcctg gtggagttat catagaaaat ttagccaaca
     4861 aagccaagct taaaaatatc tcttttaatg tacctttaaa gcattctaaa gaacttgctt
     4921 atagtttttc agggcttaaa aatgcggtgc gtttagaaat tttaaagcag gaaaatttaa
     4981 gcgatgatat aaaagcagaa atagcatatg cttttgaaaa tacagcttgt gagcatatta
     5041 tagataaact agaaaaaatt tttaatctct ataaatttaa aaattttggt gttgtgggcg
     5101 gagctagtgc aaatcttaat ttgcgttcgc gtttgcaaaa tttatgtcaa aaatataatg
     5161 caaatttaaa actagctcct ttaaaattct gttctgataa cgctttgatg atagcaaggg
     5221 ctgcggttga tgcttatgaa aaaaaggaat ttataagcat agaagaagat attttaagtc
     5281 ctaaaaataa aaatttttca aggatataga tgagaaaagc ctttactata ctagaacttg
     5341 tttttgtgat cgttatttta ggaattttag ctgctattgc cttgccaaaa atgagttcaa
     5401 gtaaagatga agccgaagtt agtaagtctt taaataacct taaaactttt atcaatgata
     5461 taagtattta tactttaaaa aatgatcgtt taaattctat caaaatgatg agcaatgtaa
     5521 gcggagttga aaatgtcgat cttaacaatt ttagtggtgt aaaagaagta aattttcgtg
     5581 taggtgatga taaagaatgt ttaaaacttg tttttataaa taaagctgat tttatactca
     5641 tgggaatttc aagtaataag gcaagtaaga attccatcat taacgcggtt aaccaaaatc
     5701 aagaagattt agaaaatatt gactttgcaa gtacttcaag caataaagct tgtgtaattt
     5761 taagtaagag cgaacatttt aaaaatctag ctagtaaaac ttatctttta ataggaggaa
     5821 ggtaatgata gtgagtaaaa cttatgagat tgactcttgt gatgatgtag agcttggtat
     5881 aaaaagagaa tcaaagcttg agtttaagct ttggtatgat gatgaaaaaa aacctgaagc
     5941 tttagtattt gttattcaag gtatgggtga tgatatatca tcaatccaat atgttggtga
     6001 ttacatgaca agacaattta atgttgctgt agttggagta aattatcatt gcatcggtaa
     6061 ccgtccacaa actggttcta ctttttattt ggatgaaatt gacaagctta ttttaaaggc
     6121 aagttgcgaa gctatagata tcaaacttcc ttatagtgtt aatgaaatgc aaaattttga
     6181 acaaatgagt gagatttttc gttttataaa taatcggata attaaaggta agcaagaagg
     6241 aagattttta ccccattatt ttttaaattt gcatgtgagt ttgcaacctg ctaaaaatga
     6301 gtatcaaaat tttggaataa tgcaagcaca agatctttta aatgctgcac tttaccttaa
     6361 aactcatgca ccttttgata ctaggggggg ggtataccag ttatcatgat gggtagttct
     6421 catggcggat acttggcaca tttatctgct aaacttgccc cttggctagt agatgcagtg
     6481 atagataatt caagttatgc taaatttctt tggcgtcttg taggatttgg aaaggagata
     6541 gactttatgc aatatagcga atttgctact tttgattttt ttcatcatat taatacgcat
     6601 tgttcaacaa aaactttttg gacaagcaat agcacttctt ctaatttttt ttctcctgca
     6661 agaagaaaaa ttcgaaatct tttagaagag catcatctta caaaacaagc aaaatattta
     6721 aaaacttgtt ttgtaagcta tcattcatta tatgatgaat atgtttcttt gaaagaaaaa
     6781 actagttttt ataaagaact taagaaactt ggctttgatg taactttgca ttctattact
     6841 aaggagttac aagttgatgg aaaattcatt aaaaatttaa atcatggcat gggaattcct
     6901 attaaacttt tggttaaaaa agaacttcct ttaatgctag ataaaataaa acaaaattca
     6961 aaaaaagatt gtaaagacaa atgcatatct tatccttgtg aggatttgtt atatcagttt
     7021 agtgagaaag ataataaaat atcacttaaa atagataaaa ttaaggaaac ttaatgacta
     7081 tactagaaaa aaatatacaa gctttattaa gtggagtgaa tgaaccttta ggaaataaac
     7141 ttttaaattt tatacaaaat aaaacttgtt ctcgttttaa tatggatgaa aatttaaata
     7201 tctatgataa aacccataat gttttcatgt atgaaaattt agaagaagaa gtaaattatt
     7261 tttaccaaag tattttagaa aaaactcctc gatatccttt tgtatgtatc tatggtatag
     7321 gcaatgcttt gcttattaaa aacttagcta aacattataa acatcttttt gtatttgaaa
     7381 g
//
LOCUS       DAPWAA010000073         7356 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.073, whole genome shotgun sequence.
ACCESSION   DAPWAA010000073 DAPWAA010000000
VERSION     DAPWAA010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7356
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.073"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            74..1564
                     /locus_tag="RTF91_001505"
     CDS             74..1564
                     /locus_tag="RTF91_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDZ4944370.1"
                     /translation="MLTWMQHHKKYLVVTIWVSTIAFVGAGFLGWGAYDFNLNRSSSV
                     ATVGNEKISFSEFDTRYRQILSYYNQISNGALTPENAEQLGIENIALSSLVEDKLLLN
                     FAKDLGVDANENEILQKLANTREFQDPTGDFNKTIYYELLNVNNLTPKDYETQLANEV
                     IVGKLDHIFNIPNKDEELKMLASSYFMRDALSIAKIDYDKKNIKINEEDLKKLWSEHK
                     EDYKTKKMYEISTYFLPSSNEKIDDKELEKFYNQDENKLKYKDFAGKVMDFQSAKNEV
                     AKDYALMQLKSVANAKFLDLKNGKDSFQKDHNISESDVYYPIDLLNKAKNGDVLRPVL
                     YNNGYIIVKLNKVDPIRNKTFEEARDEVLPIYLSEQARKNLEEKAKNSLANFKGDSIG
                     FVSRDSSRENAKVSDNMLNDSEFSYFLMNVFNTDQNSSYVIINDSKAILYKINKQKLD
                     MNSDKFEQYKTMLKQNLQNLKVNELKQELVDELKKIYPIKIYYKGN"
     gene            1561..2949
                     /gene="ftsA"
                     /locus_tag="RTF91_001506"
     CDS             1561..2949
                     /gene="ftsA"
                     /locus_tag="RTF91_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDZ4944371.1"
                     /translation="MILNILGIDLGSTQTCAIIAQKDEDGLKIIGFSKSKTNGVKKGA
                     ITNIELASKSIEEAVRSAEMMSGVHYDKVVLSISGAYTKSVDSIGVVNIPNHEIGIKE
                     IHRAVSTAKHTANLPSGYEIIHVLPYNFKVNDLEHVDDPLGMSGNRLEVSTHIVISQE
                     SHIKNLKKAVELADLRVDNIVLSGYASAIACLDDSEKELGAVLIDMGGAICDMVVHTG
                     NSIRYNDCLQIGSINITQDLSMALHTPLKEAEKIKLNYAALSQQPNTLIQIPSMGDER
                     RVNEVSLDIISNVIYARAEETLMILAKILSDNRYANAIGGGVVLTGGMTKLAGIDELA
                     PATFDNRSIRLATARKDLITGFSEIFNDPENTCAIGLCLYGAGYFTPYELDSNEKLRY
                     KGEIENFNRQIKQDIVLKKDTESEIKSDFFDESLQENDTIAIQGQLDFKEPKEKKPSV
                     FSNIWHKIMNQF"
     gene            2966..4078
                     /gene="ftsZ"
                     /locus_tag="RTF91_001507"
     CDS             2966..4078
                     /gene="ftsZ"
                     /locus_tag="RTF91_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDZ4944372.1"
                     /translation="MSEFLVEEMQHNKGAKIKVIGCGGGGGNMINHMVKMGLNDLDLI
                     AANTDAQAISTSLAKTKIQLGEKKTKGLGAGMLPEVGAESARESFEEIKASLSQSDIV
                     FIASGFGGGTGTGATPVIAQAAKEIGALTVSVVTMPFAFEGKQRKKLAESGLLELKKE
                     SDSILVIQNEKLLSIIDKKAGIKDAFRLVDDILARAVKGMVSILLDNGDINVDFADVR
                     TIMSHRGLALMGVGSASGENAIEEALSNAIESPLLDGMDIKGAKGVILHFKTSSNCSL
                     FEISAAANSIQEIVDENAKIIFGSTTDDSMEDRVEVTIIATGFEDKDKVAKKTTEEAQ
                     DSKKNPYLSLKKVSGGYDEEIMAQIETPTFLRRQMD"
     gene            4231..5043
                     /locus_tag="RTF91_001508"
     CDS             4231..5043
                     /locus_tag="RTF91_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body protein"
                     /protein_id="HDZ4944373.1"
                     /translation="MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADF
                     KRIFKETQDELPIENHTRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMT
                     REDAFYLVQTKDGEVRLTKDGNFQLDDEGYLVNKQGYKVLSSNYFNNPQNAGIRIPNG
                     AIQISVDKNGGIEVDGVQNARLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAI
                     RQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAINKLAAVK"
     gene            5072..5863
                     /gene="flgG"
                     /locus_tag="RTF91_001509"
     CDS             5072..5863
                     /gene="flgG"
                     /locus_tag="RTF91_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HDZ4944374.1"
                     /translation="MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADL
                     MYQVMKYAGTSTSATTLSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNG
                     FFQIQLPDGTIGYTRNGQFTKDNEGNIVNSDGYRLLPEMTIPEGAIAINVATDGTVSV
                     MLPGEQQETQIGQVELVQFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHG
                     FIELSNVQLVEEMTDLITGQRAYEAGSKAITTSDDMLGIVNQLKR"
     gene            complement(5929..>7356)
                     /gene="glnA"
                     /locus_tag="RTF91_001510"
     CDS             complement(5929..>7356)
                     /gene="glnA"
                     /locus_tag="RTF91_001510"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDZ4944375.1"
                     /translation="GKFVNNIDDFFKFCKQNEVLFVDFRFTDMIGTWHHITYNLHAIN
                     EETFQTGIPFDGSSIHGWQPIEKSDMILKPDAQSAFLDPFTADPTIIVFCDVYDIYKG
                     QMYEKCPRSIAKKAMEHLKNSSIADTAYFGSENEFFVFDSVKIVDTTHCSKYEVDTEE
                     GEWNDDKEFADSYNTGHRPRNKGGYFPVQPIDSLVDIRSEMVQTLEKVGIKTFVHHHE
                     VAQGQAEIGVNFDTLVEAADNVQIYKYVVKMVAHLNGKTATFMPKPLYGDNGNGMHVH
                     MSLWKDGVNLFYDKDGYSGLSQTAINYIGGILKNARSVAAFTNPSSNSYKRIVPGFEA
                     PCILTYSCQNRSASCRVPYGIGKNSARIEIRFPDSTANPYLAFVSLLMAGLNGIKNKT
                     IPIGPMDENLFDLTLDEIREKGIEQLPHTLRGSLEALIRHNSYLKPVMSDIFIDDYQH
                     LKFETQVWPVEARPTAYEFKTCYSC"
BASE COUNT         2632 a          978 c         1353 g         2393 t
ORIGIN      
        1 aaattttata attaaactcc acttaaacac ttctacgata aaatatctag tttaaattta
       61 atcaaggaat gatatgctta cttggatgca acatcacaaa aaatatcttg ttgttactat
      121 atgggttagt actatagctt ttgttggcgc tggcttttta ggttggggtg cttatgattt
      181 taatctcaat cgcagttcga gtgttgcaac agtaggaaat gaaaagataa gttttagtga
      241 atttgatact aggtatagac aaattttaag ttattataat caaattagca atggtgcttt
      301 aactcccgaa aatgctgagc aattaggcat tgaaaatata gctttaagct ctcttgttga
      361 agataaactt ttgttaaatt ttgctaaaga tttaggtgtt gatgcaaatg aaaatgaaat
      421 tttgcaaaaa cttgcaaata ctagagaatt tcaagatcct acaggagatt ttaataaaac
      481 aatttattat gaacttttaa atgttaataa cttaactcca aaagattatg aaacgcaact
      541 tgcaaacgaa gtgattgttg gtaagcttga tcatattttt aatattccta ataaagatga
      601 agaattaaaa atgctagctt ctagttattt tatgcgagat gctttgagta ttgcaaaaat
      661 cgattatgat aaaaaaaata tcaagattaa cgaagaagat ttaaaaaagc tttggagtga
      721 acataaggaa gattataaaa ctaaaaaaat gtatgaaatt tcaacttatt tcttgccatc
      781 tagtaacgaa aaaatcgacg ataaagaatt agaaaaattt tataatcaag atgaaaataa
      841 actaaaatat aaagattttg caggtaaagt gatggatttt cagtctgcta aaaatgaagt
      901 cgctaaagat tatgccttga tgcagttaaa gagtgttgct aatgctaaat ttttagattt
      961 aaaaaatggg aaagatagtt ttcaaaaaga tcacaacatt agtgaatctg atgtttatta
     1021 tccaattgat cttttaaata aagctaaaaa tggagatgtt ttacgacccg tgctttataa
     1081 taatggatat atcatagtta aactaaataa agtagatcct ataagaaata aaacttttga
     1141 agaagctaga gatgaagttt tgcctatata tttgagtgaa caggctagaa aaaatttaga
     1201 agaaaaagct aaaaatagtt tggcaaattt taaaggagat agtataggct ttgtaagtcg
     1261 cgatagttct cgtgagaatg caaaagttag tgataatatg ttaaatgact ctgaattttc
     1321 ttatttttta atgaatgtat ttaatactga tcaaaatagc tcttatgtga tcatcaatga
     1381 tagtaaagca atattatata aaataaacaa acaaaaatta gatatgaatt ctgataaatt
     1441 tgaacaatat aaaactatgc ttaagcaaaa tttgcaaaat ttaaaagtaa atgaacttaa
     1501 gcaagaactt gttgatgaac ttaaaaagat atatccgata aaaatttatt ataaagggaa
     1561 ttgattttga atatattagg aattgattta ggctcaaccc agacttgtgc cattattgct
     1621 caaaaagatg aagatggatt aaaaattatt ggtttttcta agtcaaaaac caatggggtt
     1681 aaaaaaggtg ctattaccaa tatagagctt gcttctaaat ccattgaaga ggctgttaga
     1741 agtgctgaga tgatgagtgg ggttcattat gataaggttg tgctatctat atcaggtgct
     1801 tatactaaaa gtgttgatag tataggtgtt gttaatattc caaatcatga aataggcatt
     1861 aaagaaattc atcgtgctgt aagcacagct aagcatactg ctaacttacc aagcggttat
     1921 gaaattatcc atgttttacc ttataatttc aaagttaatg atcttgaaca tgttgatgat
     1981 cctttgggaa tgagtggcaa tcgtttggaa gtttcaactc atatagtgat ttcacaagaa
     2041 tctcatatta aaaatcttaa gaaagcagtt gaattggctg atttgagagt ggacaatata
     2101 gttctttcag gctatgcttc agctatagct tgtttagatg atagcgaaaa agaattaggt
     2161 gctgttttga ttgatatggg cggggcaatt tgtgatatgg ttgttcatac tggaaattcg
     2221 attagatata atgattgttt acaaattggt tcgattaata ttactcaaga tttatccatg
     2281 gcattgcata cgcctttaaa agaagcagaa aaaattaagc ttaattatgc agctctttct
     2341 caacaaccta ataccctaat acaaattcct tcaatgggtg atgaaagaag agttaatgaa
     2401 gtttctttag atattatttc aaatgtaatt tatgcaagag cagaagaaac tttgatgatt
     2461 ttagcaaaaa tattaagtga taatcgttat gctaatgcta taggcggtgg agttgtttta
     2521 acaggtggaa tgactaagtt agcaggaatt gatgagttag ctcctgcaac ttttgataat
     2581 cgctcaatta gattagctac tgcaaggaag gatttgatta ctggttttag tgaaattttt
     2641 aacgaccctg aaaatacttg tgctataggg ctttgtttat atggagcagg atattttacg
     2701 ccttatgaac ttgattctaa tgaaaaatta agatacaagg gggaaattga aaatttcaat
     2761 cgtcaaatta agcaagatat tgttttgaaa aaagatacag aaagtgaaat aaaatctgat
     2821 ttttttgatg aaagtttgca agaaaatgat acaattgcaa tacaaggaca attagacttt
     2881 aaagagccga aagaaaaaaa acctagtgtt ttttcaaata tctggcataa aattatgaat
     2941 caattttaac aaggagaaaa tttttatgag tgaattttta gtagaagaaa tgcaacataa
     3001 taaaggtgca aaaattaagg ttataggctg cggtggtggc ggtggtaata tgatcaacca
     3061 catggttaaa atgggattaa atgatcttga tttaattgcg gcaaataccg atgcacaagc
     3121 tatttcaact tcattagcga aaactaaaat tcaacttggt gagaaaaaaa ctaaaggttt
     3181 gggtgctggt atgcttcctg aagtaggcgc agaaagtgct agagaaagtt ttgaggaaat
     3241 aaaagcaagc cttagtcaaa gtgatattgt atttattgct tcaggttttg gtggaggtac
     3301 tggaacaggt gcaaccccag tcatcgcaca agcggctaaa gaaattggag ctttaactgt
     3361 ttctgttgta actatgcctt ttgctttcga aggaaaacaa agaaaaaaac ttgctgaaag
     3421 cggtctcctt gaacttaaaa aagaaagtga ttctattctt gtaattcaaa atgaaaaatt
     3481 attaagcatt attgataaaa aagcaggtat taaagatgcc tttagattgg ttgatgatat
     3541 tttagctcgt gctgtaaaag gtatggtgtc tatcttgctt gataatggag atattaatgt
     3601 tgactttgca gatgtaagaa ctatcatgag tcatcgcgga cttgcactta tgggtgttgg
     3661 tagtgctagc ggtgaaaatg ctatagagga agctctttca aatgctatag aatctccttt
     3721 gcttgatgga atggatatta aaggtgccaa gggtgttatt ttgcatttta aaacaagctc
     3781 taattgctct ttatttgaaa tttcagcagc agcaaatagt atacaggaaa ttgttgatga
     3841 gaatgctaag attatttttg gttctactac agatgatagc atggaagata gagttgaagt
     3901 aactattatt gcgacaggat ttgaagataa agataaggta gctaaaaaaa ccaccgaaga
     3961 agctcaagat tctaagaaaa atccttattt aagtcttaaa aaggtgagtg gtggttatga
     4021 tgaagaaata atggcgcaaa ttgaaacgcc aactttcttg cgtcgtcaaa tggattaaat
     4081 tgatttctaa agcaagattg atttgatctt gcttttttat atttaaaatt atctcctagc
     4141 aatgtttcaa acaattattt ttctttattt ttaaaaagtt ggaacactct ttgcttttat
     4201 agctataaaa tcttaattat aggtgaaaat atgcaaaatg gatattatca agcaactggc
     4261 ggaatggtaa ctcagtttaa taaacttgat gtaattacta acaatcttgc caatataaat
     4321 acaagtggat acaaaagaga tgatgtagtt attgcagatt ttaaaaggat ttttaaagaa
     4381 actcaggatg agttacctat agaaaatcac acaagagatg catctcgttt tgtaaatact
     4441 accatagatg gaattcctca agtttctcaa gaatatacgg attttagtct aggttcttta
     4501 aaagctacaa ataatccttt ggatttggca atgactagag aagatgcttt ttacttggtt
     4561 caaaccaaag atggagaagt aagattaacc aaagatggaa attttcaact tgatgatgaa
     4621 ggctatttgg taaataagca aggttataag gtactaagta gcaattattt taataaccct
     4681 cagaatgcag gtatacgtat tcccaatggt gctattcaaa ttagtgttga taaaaacgga
     4741 ggcattgaag ttgatggcgt tcaaaatgca agattatttg tagcgcaagt agatgatata
     4801 agagctttac aaaaagatgg agataatgtt tataaaatag atgatctaac tcgtattaga
     4861 gatttagaaa attccaatgc tattcgtcaa ggtttttctc aaggatcaaa tgttaatccg
     4921 gttacggaaa tggtaggatt gattgaagca aatagaatgg tagaaatgta tcaaaaagtt
     4981 atgacagctc atatggatga tttaaatcaa gaagctatta ataagcttgc agctgttaag
     5041 taatttgaaa taaaataaaa aaggattaaa aatgatgaga tcgcttcaca ctgctgctac
     5101 aggaatggta gcgcagcaaa cacaaattga tgttacttca aataacatcg ccaatgttaa
     5161 tacagcaggt tttaagaaaa gtcgtgcaga atttgctgat cttatgtatc aagttatgaa
     5221 gtatgcagga acttcaactt cagctaccac tctttctcct tcaggtatag aagtgggtgt
     5281 gggtgtgcgt ccaacagcag taactaaagt ttttactgaa gggaatttaa aatcaacaag
     5341 tactgatggt cttgacatgg ctattgcagg taatgggttt tttcaaatac aacttcctga
     5401 tggtactata ggatatacta gaaatgggca atttacaaaa gataatgaag gtaatattgt
     5461 aaattcagat ggttatagac ttttacctga aatgacaata cctgaaggtg caatagcgat
     5521 taatgttgct acagatggaa ctgtttctgt aatgttacca ggagaacaac aagaaactca
     5581 aattggtcaa gtggagcttg ttcagtttat aaatccagca ggccttcatt ccatgggtga
     5641 taatctttat cttgaaacag gagcaagtgg tgcgcctgta gcaggtatag caggacaaga
     5701 tggacttgga acaataagac atgggtttat agagcttagc aatgttcaac ttgttgaaga
     5761 aatgacagat cttatcacag gacaaagagc ttatgaagca ggttctaaag caattacaac
     5821 gagtgatgat atgttaggaa ttgtaaatca gcttaagcga tagttgatat aaaattaaat
     5881 aatttttaat tctttttgtt taatggcgtt aacacgccat taaatttttt agcaagagta
     5941 gcaagtttta aattcataag cagttggacg agcttctact ggccaaactt gggtttcaaa
     6001 ttttaagtgt tgataatcat caataaaaat atcactcatt acaggtttta aataagaatt
     6061 atgtcggatt aaagcttcta aacttcctct tagtgtatgt ggtaattgct ctatcccttt
     6121 ttcgcgaatt tcatctaagg taagatcaaa taaattttca tccataggac ctataggaat
     6181 agttttgttt ttgattccat taagacctgc cattaaaaga ctaacaaagg ctagataagg
     6241 attagcagtg ctatcaggaa aacgaatttc aatacgagct gaatttttac ctataccata
     6301 aggaacacga caacttgctg atctgttttg acaagaataa gttaaaatac aaggagcttc
     6361 aaaaccagga actattcttt tgtaagagtt agagctcgga tttgtaaaag ctgcaacact
     6421 tctagcattt tttaaaattc cacctatata atttatagca gtttggctaa gtccactgta
     6481 tccatcttta tcataaaata aatttactcc atctttccat aagctcatat gaacatgcat
     6541 accattgcca ttatctccat ataaaggttt tggcatgaaa gtagcagttt tgccatttaa
     6601 gtgagctacc atttttacaa catatttata aatttgaaca ttatcagctg cttctacaag
     6661 ggtgtcaaaa tttactccga tttcagcttg tccttgtgca acttcatgat gatgaacaaa
     6721 agttttaatg cccacttttt caagagtttg aaccatttca gaacgaatgt ctaccaaaga
     6781 gtcaatcggc tgaactggaa aatatccacc tttgtttctt ggtctatgtc ctgtattata
     6841 gctatcagca aattctttat catcattcca ctctccttct tcagtatcaa cttcatattt
     6901 agagcaatga gtagtatcaa ctatttttac actatcaaaa acaaagaatt cattttctga
     6961 gccaaaatag gcagtatcag ctatactact atttttaaga tgttccattg ctttttttgc
     7021 tatacttctt ggacattttt catacatttg tcctttataa atatcatata catcacaaaa
     7081 tactatgata gtaggatcag ctgtaaaagg atctaaaaag gcactttgtg catcaggttt
     7141 taaaatcata tctgattttt caataggttg ccatccatgg attgagcttc catcaaatgg
     7201 aatacctgtt tgaaatgttt cttcattgat tgcgtgaaga ttataggtaa tatgatgcca
     7261 agttcctatc atatctgtaa aacgaaaatc aacaaaaagc acttcatttt gtttgcaaaa
     7321 tttgaaaaaa tcgtctatat tattaacaaa ttttcc
//
LOCUS       DAPWAA010000074         7332 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.074, whole genome shotgun sequence.
ACCESSION   DAPWAA010000074 DAPWAA010000000
VERSION     DAPWAA010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7332
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.074"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..102
                     /locus_tag="RTF91_001511"
     CDS             <1..102
                     /locus_tag="RTF91_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ4944376.1"
                     /translation="IISKSGFSKEFDKICEQKLLLLDLNDFKILLEE"
     gene            106..1125
                     /gene="flgS"
                     /locus_tag="RTF91_001512"
     CDS             106..1125
                     /gene="flgS"
                     /locus_tag="RTF91_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system sensor
                     histidine kinase FlgS"
                     /protein_id="HDZ4944377.1"
                     /translation="MNESILKSLDSNEKETLQKGLESLIEQTYVIENEYKTLNENYNS
                     LRAMVDEIIEVLPSALWILDKEKNIVLQNQEALKNPKLLSIISLEKMRDELEFEGRFY
                     AVKIIAHNEKTIVSATDISDEKRNERLASMGSVAAHLAHEIRNPIGSISLLASTLFSR
                     SELKNKHIVLEIQKAIARVERIVNSTLLFTKGVHINALSFNLLELKEECESAINSYNF
                     TSQIDFEISFLDKQICADKALLGLVLQNLIYNAIDAIEESECEKPMIKILASCDNEKI
                     CIRVYDNGYEIKDEKLVFEAFKTTKLKGNGLGLSLSKEIINAHKGELSFESNPKNFYF
                     TLPLV"
     gene            complement(1415..2842)
                     /locus_tag="RTF91_001513"
     CDS             complement(1415..2842)
                     /locus_tag="RTF91_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDZ4944378.1"
                     /translation="MLVNTLYFINSLFFNFCIAFYLMNALQWYSYKFKRIFFHYHKPL
                     WHLYFLLIPYFFFLTFPLYSLAYFALIHTPILYFWNKSIDKKLIFTSKVKWFFVFVFV
                     YNVIFAILALRFSFLFNLLTLPFALLSLKIYEFFTNLYYKKQAKAKLKTNQNLKIILI
                     TASFGKTSIKNFLYELLKDNFKSYKTPRSVNTLLGIVADINVNLTPDTQIYIAEAGAR
                     LKGDIDEITRFLEPHISIVGEIGNAHLEYFKSVENICSTKLEALNSKRLEKAFLHSST
                     QKEEDKLISLYDDKLSFIHSSLKGLEFKVNIENKLYDFKSQILGAFNAQNLCACILCA
                     NYLGIKLEKIQKQVLSINSVEHRLQVLSREPKFIIDDGFNGNFKGMSTSYELCKNYKG
                     RKVLVSPGIVEVSEEENIKLAKVINECFDLAIITAQVNAEIFKKELKIKTIILKEKSQ
                     LVQTLAKETKNGDLILFSNDAPSFM"
     gene            complement(2843..3562)
                     /locus_tag="RTF91_001514"
     CDS             complement(2843..3562)
                     /locus_tag="RTF91_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDZ4944379.1"
                     /translation="MAQTELSYKNKKYQISYEILGDLSLPQILILHGWGANKELMKQS
                     FCPFLKDFCQIYMDLAGFGNSSIEEILNTQDYANITELFLKQKNFNICFFLGHSFGGK
                     VITLLAKEKDTLILLSSAGILTKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGANL
                     SPIMYETFKKVVDEDFSEIFKQQKAKSLIFWGKSDKATPLYCGKKMHELLKNSTFYPL
                     DGDHFFFLKHSAFIAQKIKEI"
     gene            complement(3564..3779)
                     /locus_tag="RTF91_001515"
     CDS             complement(3564..3779)
                     /locus_tag="RTF91_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HDZ4944380.1"
                     /translation="MLSFKQDEIYTATEVVRNFSSIMEKLKKSESGKIVILKNNKFES
                     VMLSMKEFERLQNAMQLLENIYKNQKA"
     gene            complement(3839..4879)
                     /locus_tag="RTF91_001516"
     CDS             complement(3839..4879)
                     /locus_tag="RTF91_001516"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDZ4944381.1"
                     /translation="MKFAILFGGNSYEHEISIVSSVVLKKVIDQNLEFIFCDEERRFY
                     HIPDEKMNSKTFNTKAYKKEKELFIKQGGFFSKGFLKENKLECDCVINLIHGRDGEDG
                     KIAALFEFYSIKFIGPRLEASALSFNKELTKLYAKSIGVKTLDYTMLRKGQNFKEKLI
                     FPCIIKPARLGSSIGISIVKDEKDLEYAKDVGFEFDNDLLVEEFKSDIKEYNLAGCMI
                     NDEFVFSIIEEPKKKEFLDFEQKYLSFSGHNELIEADLGEELKTKLKDNFKKIYNPLF
                     KGALIRCDFFVLDNEVYLNEINPNPGSLANYLFKDFNTTLNALADQISLEKMIKINYS
                     FLHSINGQKGKL"
     gene            complement(4889..5440)
                     /gene="ruvA"
                     /locus_tag="RTF91_001517"
     CDS             complement(4889..5440)
                     /gene="ruvA"
                     /locus_tag="RTF91_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDZ4944382.1"
                     /translation="MVVGIEGIITKKEPTFIIVKCASGLSYGIFISLFCSAKIQTQEK
                     HEFFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNGVGANTAMAVCSSLDVNSFYKAL
                     SLSDESVLKKVPGIGPKSAKRIIVELSDTNMKLENVSDDKSEALAALLTLGFKQEKII
                     SVLASSQAIGTSELIKEALRKLG"
     gene            complement(5416..7275)
                     /locus_tag="RTF91_001518"
     CDS             complement(5416..7275)
                     /locus_tag="RTF91_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HDZ4944383.1"
                     /translation="MALDEKIIAYTENPARELLSVTSRTNLSLNELDFSLLAFSTQYR
                     FGDLEWKKISEKELTLFDKDEIFLKNDLQIKQKYKIEIFHGTKQSKASQAIKLVANKN
                     LTKIIAQIDFTNLDFHEKLPLELLQNIYKKMLKLKFLIGIRIFDFKKNLMSFCNQHKN
                     TPLNKTIQITVAQGIDPIESQDESLILAYKEKTKNYTIDEKRSGIIVVDENEVVLKHT
                     KLKQGKEGKDLNLHTLKVLAANENKVEFSCSSAFKQIEQDEYTEYIALKKGYVVQDGG
                     KFDIANELDFNGVDFKNIGIIRAGLDKNVKININFLSEVKDAVNSGVGIECEELNVIG
                     SIGSNTQLNATKMKIEGATHSKAKIQAKQAYIKTHRGFAEAEILNIDLLEGGTIKAKE
                     VRIKKSLGGNIQADKIYIENLESNNSCVFFENTTIESINGDNNKFHAKIKIIDKNYDE
                     EFTILDEHISKLNHKINKIRQYILSSKNGILSVEKKIAELKSQGQNVPMQYEKALKDF
                     SLQNLELSKLQNEEKELLERKKSLQLELINLQKMLFEATFINKSGKWTDMNEIKFSLL
                     EPKEDIFYSSSVNENIKFISIKKVIQNNQESIELHKKLDYEEKDIAWLSESKE"
BASE COUNT         2435 a         1060 c         1044 g         2793 t
ORIGIN      
        1 ataatctcaa aaagtggttt tagtaaagaa tttgataaaa tatgcgaaca gaaattgctt
       61 ttgcttgatt tgaatgattt taagattttg ttagaggaat gataaatgaa tgaaagtatt
      121 ttaaaaagtt tagattcaaa tgaaaaagaa accttgcaaa aaggcttgga aagtcttata
      181 gagcaaactt atgtgataga aaatgaatat aaaactttaa atgaaaatta taattcttta
      241 cgcgcaatgg ttgatgagat tatagaggta ttgcctagtg cactttggat tttagacaaa
      301 gaaaaaaaca ttgttttaca aaatcaagaa gctttgaaaa atccaaagtt gcttagtatt
      361 atcagtcttg aaaaaatgcg tgatgagctt gaatttgaag gtaggtttta tgcggtaaaa
      421 atcatagcac ataatgaaaa aaccatagtt tcagctacgg atattagcga cgaaaaacgc
      481 aatgaaaggc ttgcaagtat gggtagcgta gcggctcatt tagcgcatga aataagaaat
      541 cctatcggtt ctatatcctt acttgcttca accctttttt ctcgtagtga acttaaaaac
      601 aagcatatag ttcttgaaat tcaaaaagcc attgctaggg tagaacgcat cgtaaattca
      661 actttgcttt ttactaaagg tgtgcacatt aatgctttaa gtttcaatct tttggaatta
      721 aaagaagaat gtgaaagtgc gattaactct tataatttta cttctcaaat agactttgaa
      781 atatcttttt tagataagca aatttgtgcc gataaagccc ttcttggttt ggttttacaa
      841 aatttaattt acaatgctat tgatgcgata gaagaaagtg aatgcgaaaa gcctatgatt
      901 aaaatcttag caagttgtga caatgaaaaa atatgcatta gggtgtatga taatggttat
      961 gaaataaaag atgagaaatt ggtttttgaa gcttttaaaa cgacaaaact taaaggcaat
     1021 ggccttggtt tgtcgctttc taaagaaatt atcaacgctc ataagggaga attaagcttt
     1081 gaaagtaatc ctaagaattt ttattttacc ttgcctttag tgtgataaat attttttata
     1141 ctagaaattt ttatctatga tttttaagta atgtgaaaaa tagtttagtt tttgttctat
     1201 ttcaagcata ggttgtattg gtttgataaa gaatttagtc aagcaaaagc caatgtttgc
     1261 aaggcaagta gtgaaagtat aaattcttat attaattcta aagggataga cttaacaatc
     1321 tttagggtaa actaggattt agaagtgact gtgtgaaatc aaattaaata tttagatgat
     1381 attttataaa tacttaatat aagattaaaa agcattacat aaaactaggt gcatcatttg
     1441 aaaatagtat caaatcccca ttttttgttt ctttggcaag agtttgaact aactgacttt
     1501 tttctttaag tataatggtt tttattttta gttctttttt gaaaatttca gcgttaactt
     1561 gtgcggtaat gatagcaaga tcaaaacatt cattgatgac tttagcaagt tttatgtttt
     1621 cttcttcgct tacttctact atgccaggac ttactaaaac tttgcgtcct ttatagtttt
     1681 tgcaaagctc atagcttgtg ctcatacctt taaagtttcc attaaaacca tcatctatga
     1741 tgaatttagg ttctcttgaa agcacttgta aacgatgttc tacggaattt atacttaaaa
     1801 cttgcttttg aattttttcc agttttatac caagataatt agcacaaagt atgcaagcgc
     1861 aaagattttg tgcattgaaa gcccctaaaa tttgactttt gaaatcgtat agcttatttt
     1921 ctatatttac tttaaattct aaacctttaa ggcttgaatg aataaagctt aatttatcat
     1981 cataaaggct tatgagttta tcttcttctt tttgagtgct agagtgtaaa aaagcttttt
     2041 ctagtctttt ggaatttaaa gcctcaagtt tggttgaaca gatattttca acgcttttaa
     2101 aatactccaa atgtgcattg cctatctctc ctactatact gatatgaggt tctaaaaaac
     2161 gcgtgatttc atcgatatcg cctttaagtc tagcaccggc ttcagctatg taaatttgtg
     2221 tatctggagt taaatttaca ttgatatcag cgactatgcc tagtaaggta tttacagagc
     2281 gtggtgtttt atagctttta aaattatctt ttaagagttc gtataaaaaa tttttaatac
     2341 ttgtttttcc aaaacttgca gtaatgagaa taatttttaa attttgattg gtttttagtt
     2401 tagctttggc ttgtttttta taatacaaat ttgtaaaaaa ttcataaatt ttaagactaa
     2461 gcaaagcaaa aggtagggta agaagattaa aaagaaaaga aaaacgtaaa gcaaggatag
     2521 caaaaatgac attataaaca aaaacaaaaa caaaaaacca tttaacctta cttgtaaaga
     2581 taagcttttt atctatgctt ttgttccaaa aatataaaat cggcgtatga attagtgcaa
     2641 aatacgctaa agaatacaaa ggaaaagtta agaagaaaaa ataagggata agtaaaaaat
     2701 acaaatgcca caaaggttta tgatagtgaa aaaatatgcg tttaaattta taagaatacc
     2761 attgtaaagc attcataagg taaaaagcta tacaaaagtt aaaaaataaa gaattaataa
     2821 aataaagagt attgacaagc atttaaattt ccttgatttt ttgagctata aaagcagaat
     2881 gttttaaaaa gaaaaaatga tctccatcta aaggataaaa agtgctattt tttaaaagct
     2941 catgcatttt cttaccacaa tacaaaggcg tagctttatc gctttttccc caaaaaatca
     3001 aacttttagc cttttgttgt ttaaaaattt cactaaaatc ttcatcaaca acttttttaa
     3061 aggtttcata catgataggg ctaagatttg ctccatcttt gctagcaaaa tagcgataaa
     3121 atttccccaa accaaaaagt tttaaaattt taaaaatgcg gattttaaaa cgtactttta
     3181 aggatttttt agtcaaaatt cccgcacttg aaagtaagat cagcgtgtct ttttccttag
     3241 cgagcagggt gattactttt ccaccaaaag aatgtcctaa aaaaaaacag atattgaaat
     3301 ttttttgttt taaaaaaagc tctgtgatat tagcataatc ttgagtgttt aaaatttctt
     3361 ctatacttga atttccaaaa cctgctaaat ccatataaat ttgacaaaaa tcttttaaaa
     3421 aagggcaaaa actttgcttc ataagctctt tattagctcc ccagccgtgc aaaataagta
     3481 tttgcggtaa ggaaagatcg cctaaaattt cataagaaat ttgatatttt ttgtttttat
     3541 aagaaagttc tgtttgagcc atcttaagcc ttttgatttt tgtagatatt ttctaaaagt
     3601 tgcatggcat tttgcaaacg ttcaaattct ttcatactaa gcattacaga ttcaaatttg
     3661 ttatttttta aaataactat ttttccactt tcgctttttt taagtttttc cataatggag
     3721 ctaaaatttc tcactacctc agtggcggta taaatttcat cttgtttaaa agagagcatt
     3781 tttcttccta aaatacgcta aattatacat aaaatttagc gtattttgac ttaaaagctt
     3841 ataattttcc tttttgtcca ttaatggaat gaaggaaact atagttaatt tttatcattt
     3901 tttcaagtga aatttgatca gccaaagcat ttaaagtagt gttgaagtct ttaaaaagat
     3961 aattagccaa agaaccagga tttggattga tttcatttaa atatacttca ttatcaagta
     4021 caaaaaaatc acagcgtatt aaagcgcctt taaataaagg attataaatt tttttaaagt
     4081 tatctttgag ttttgttttt aactcttcac ccaaatccgc ttctataagc tcattatgtc
     4141 ctgaaaagct aagatatttt tgctcaaaat ccaaaaattc ttttttcttt ggttcttcta
     4201 tgatagagaa aacaaactca tcattgatca tgcatcctgc aagattgtat tctttgatat
     4261 cacttttaaa ctcttctact agaagatcat tgtcaaattc aaatcctaca tctttggcgt
     4321 attctaaatc tttttcatct tttactatgc taatacctat gctactccca agtcttgcag
     4381 gttttataat acaaggaaaa ataagctttt ctttaaagtt ttgtcctttt cttagcatag
     4441 tataatcaag tgtttttaca ccaatacttt ttgcataaag tttagtaagt tctttgttga
     4501 aagataatgc actagcttca agtctaggtc ctatgaattt aatagaataa aactcaaata
     4561 aggctgcgat ttttccatct tctccatctc taccgtggat aagattgatc acgcaatcac
     4621 attctagttt attttctttt aaaaagcctt tactaaaaaa accaccttgt ttaatgaaga
     4681 gttctttttc ttttttataa gctttagtgt taaaagtttt agaattcatt ttttcatctg
     4741 gaatatgata aaatcttctt tcttcatcgc aaaaaataaa ttccaaattt tgatcgatga
     4801 cttttttaag tactacagag cttactatgc tgatttcatg ttcgtaagaa tttccaccaa
     4861 aaagtattgc aaatttcatt ttattccttt atcctagttt tctaagagct tctttaatga
     4921 gttcgctcgt gcctattgct tgagaacttg ctaaaacact tataattttt tcttgtttaa
     4981 agcctagtgt aagaagtgcg gctaaggctt cgcttttatc atcgcttaca ttttcaagtt
     5041 tcatgtttgt gtcagaaagt tctactatga tgcgttttgc actttttgga cctatacctg
     5101 gtactttttt aagcacgctt tcatcactta aacttaaagc cttataaaaa gaattcacgt
     5161 caagactaga gcatactgcc atagcagtgt ttgcacccac tccgttgact tttaaaagca
     5221 tttcaaacat tttttgttca tctttatcta agaaaccata aaatttattg gaatcttctt
     5281 tgatgatttg agtgataaaa aactcatgtt tttcttgggt ttgaatttta gcagaacaaa
     5341 aaagtgaaat aaatatccca taacttaagc cactagcaca tttaacaata ataaaagtag
     5401 gttctttttt tgtgattatt ccttcgattc cgacaaccat gctatatcct tttcttcgta
     5461 atctaatttt ttatgtaatt ctatactttc ttggttgttt tgtatgactt ttttaatgct
     5521 tataaattta atattttcat taacggatga agagtagaaa atatcttctt taggttctag
     5581 gagtgaaaat ttaatctcat tcatatcagt ccatttgcca cttttattta taaaagttgc
     5641 ttcaaaaagc attttttgca aattgattaa ttctaattgc aaagattttt tgcgttcaag
     5701 aagttctttt tcttcgtttt gcaatttact taactcaaga ttttgcaaag agaaatcttt
     5761 taaggctttt tcgtattgca taggaacatt ttgaccttga cttttaagct ctgctatctt
     5821 tttttcaacg cttaaaattc catttttgct agataaaata tattgtctta ttttatttat
     5881 tttatgattt agtttagaaa tgtgttcatc taaaatcgta aattcttcat cgtaattttt
     5941 atcaattatt ttaattttgg cgtgaaattt attattatct ccattaatgc tttctattgt
     6001 ggtattttca aaaaacacgc aagaattatt gctttctaaa ttttctatat aaatcttatc
     6061 agcttgtata tttccaccta agcttttttt aattcttact tctttagctt taattgttcc
     6121 accttcaagc aagtctatgt ttaaaatttc agcttctgca aatcctctat gggtttttat
     6181 ataagcttgc ttggcttgaa ttttagcttt agagtgcgta gcgccttcaa ttttcatttt
     6241 tgtagcgtta agttgagtgt tacttcctat acttcctatt acatttaatt cctcgcattc
     6301 tattccaacg ccagaattta cagcatcttt tacttctgaa aggaaattta tattgatttt
     6361 gacattttta tctaatccag ctcttataat tcctatgttt ttaaaatcca ctccattaaa
     6421 gtctaattca ttggcaatat caaattttcc cccatcttgc actacatagc ctttttttaa
     6481 agctatatat tctgtatatt catcttgttc tatttgttta aaggctgaag agcaagaaaa
     6541 ttcaacttta ttttcattgg cggctaaaac ttttaaggta tgtaaattta agtctttccc
     6601 ttctttgcct tgttttaatt tagtgtgttt taaaacaact tcattttcat caacaacaat
     6661 aatacctgag cgtttttcgt caatagtgta gtttttagtt ttttctttat aggctaagat
     6721 cagagattca tcttggcttt ctatgggatc aataccttgc gcaacagtaa tttggatggt
     6781 tttatttagg ggtgtatttt tatgttgatt acaaaaagac attaaatttt tcttaaaatc
     6841 aaaaatacga atgcctatta aaaatttaag ctttaacatt tttttataaa tattttgcaa
     6901 aagctctaat ggtagttttt catgaaaatc caagtttgta aaatcaattt gagcaattat
     6961 tttggttaaa tttttatttg caaccaattt gattgcttga gatgctttgc tttgctttgt
     7021 gccgtggaaa atttctattt tatatttttg cttgatctga agatcgtttt ttaaaaaaat
     7081 ttcatcttta tcaaaaagag ttaattcttt ttcagagatt tttttccatt ctaaatcccc
     7141 aaaacgatat tgtgttgaaa atgctaataa actaaaatca agttcattta agctaagatt
     7201 tgttcgtgaa gttacgctta aaagctctcg agccggattt tcagtatagg cgataatttt
     7261 ttcatccaaa gccaaaactt tccccttgta aaaaattaag aatgtaatta tagtcaattt
     7321 ttaatcaatt tt
//
LOCUS       DAPWAA010000075         7285 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.075, whole genome shotgun sequence.
ACCESSION   DAPWAA010000075 DAPWAA010000000
VERSION     DAPWAA010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7285)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7285)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7285
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.075"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            994..1785
                     /locus_tag="RTF91_001519"
     CDS             994..1785
                     /locus_tag="RTF91_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HDZ4944384.1"
                     /translation="MKSRDKKDLILDSIIQTYLLDNVPIGSNELNLNLCIPASTIRVY
                     LKRLSNEGLITQLHISSGRIPTILTMQNYWQSFWEKEQDQDINIKSENFLKELSKEFE
                     IYCLVYGGRSLVLKEVFDLNAKFIVLDFKEEELVLKYKKEAWNFLQSLIGFDLFTIEK
                     IAFRVHFTDLVEKIASLRQNLIYYRGNEERAYQIYQNDEFVKLLDCGVHRYFKESLEF
                     EPLFKEGFMGIRVDARFLGEDVNIILAGSVYTNYKKILQYIKEAA"
     gene            1782..2312
                     /gene="grpE"
                     /locus_tag="RTF91_001520"
     CDS             1782..2312
                     /gene="grpE"
                     /locus_tag="RTF91_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDZ4944385.1"
                     /translation="MSEQKQEFENENAENSENLQDENLQNIEDDEQNKLQKEYNELKD
                     KYMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAINVECHDEISLKI
                     KEGVQNTLDLFLKKLEKNGVALIKEEKEFDPNLHEAMFHVDSENHQSGEVVQVLQKGY
                     KISDRVIRPTKVSVAK"
     gene            2334..4205
                     /gene="dnaK"
                     /locus_tag="RTF91_001521"
     CDS             2334..4205
                     /gene="dnaK"
                     /locus_tag="RTF91_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDZ4944386.1"
                     /translation="MSKVIGIDLGTTNSCVAVYERGESKVIPNKEGKNTTPSVVAFTD
                     KGEVLVGDSAKRQAVTNPEKTIYSIKRIMGLMINEDAAKEAKNRLPYHITERNGACAI
                     EIAGKIYTPQEISAKVLMKLKEDAEAFLGESVVDAVITVPAYFNDAQRKATKEAGTIA
                     GLNVLRIINEPTSAALAYGLDKKDSEKIVVYDLGGGTFDVTVLETGDNVVEVLATGGN
                     AFLGGDDFDNKLIDFLANEFKDETGIDLKNDVMALQRLKEAAENAKKELSSANETEIN
                     LPFITADASGPKHLVKKLTRAKFEGMIDSLVAETITKINEVVSDAGLKKDEIKEIVMV
                     GGSTRVPLVQEEVKKAFGKDLNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLS
                     LGIETLGGVMTKIIEKGTTIPTKKEQIFSTAEDNQSAVTINVLQGEREFSRDNKSLGN
                     FNLEGIPPAPRGMPQIEVTFDIDANGILTVSAKDKATGKAQEIKITGSSGLSEEEINN
                     MVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSELGEKVAAADKENIQKALDDL
                     RETLKNQNASKEEIESKMKVLSEVSHKLAENMYKKDEPNAANDKKKKDDDVIDAEVE"
     gene            4334..6244
                     /locus_tag="RTF91_001522"
     CDS             4334..6244
                     /locus_tag="RTF91_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDZ4944387.1"
                     /translation="MEQGQFQPIVNFIWSVADDLLRDVYVKGKYRDIILPMTIIRRID
                     AVLEPTKDKVLKTYNTYKDEFENLESLLGGKQGNNLGFFNYSQFNLQTLLNDPKNIRI
                     NFENYLDCFSENIKDIISKFKFKNQLDTLEESNILFGVIERFCSPKVNFGIEDILDEK
                     GNLIHKGLSNLGMGYVFEELIRKFNEENNEEAGEHFTPREIIELMTHLVFLPVKEQIK
                     KGTWLIYDNACGSGGMLTESKEFITDPNGLIKSKANIHLYGQEINPETYAICKADMLI
                     KGEDPDHIKFGSTLSNDQQNLQFDFMLSNPPYGKSWENDQKILGVEKKGSNSTCNDPR
                     FRVGITSKSDGQMMFLLNMLSKMKTDSPLGSRIASVHNGSSLFNSDSGMVAIRKDIIE
                     KDYLEAIVALPTNMFYNTGIPTFIWIITNKKPEHKKGKVWLINATNEEYFSKMKKSLG
                     SKQNEMTKEHIEKITELFLNFTSSKDCKILDNEDFGYTKITIEKPKSIEALRDDEKFA
                     KLKDKEKILEKLQELEQNPQDFKDREEFIKFLGVKLKKSEENLIIDSDKTNNTEKIPL
                     KIDIQSYYDTEVKPYVKNSWIARESASVGYEILFNKYFYTYTPPRKLKEINDELEKLE
                     KEVQDLLREIMQ"
     gene            6241..6816
                     /locus_tag="RTF91_001523"
     CDS             6241..6816
                     /locus_tag="RTF91_001523"
                     /inference="COORDINATES: protein motif:HMM:NF013579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDZ4944388.1"
                     /translation="MKNFKDSGIEWLGEIPEHWEVVKIKHISEVVTGKTPALDFEWGD
                     NMLFVTPTDCDLDKKYISSSLRKLSQKGIKNFDSLIIPKNSILVTCIASIGKVVINPE
                     KVVTNQQINSVIPNLGLVSPDFIFYQLLVTMPFAERYFCGYSILPILNKSEFSNIKIP
                     LPPLKEQEQIANFLDEKCEKIDLLIEKTKSK"
     gene            6894..>7285
                     /locus_tag="RTF91_001524"
     CDS             6894..>7285
                     /locus_tag="RTF91_001524"
                     /inference="COORDINATES: protein motif:HMM:NF024565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDZ4944389.1"
                     /translation="MITKISMKNIASYKDETSLETNKRINLIYGLNGIGKTQISKFLA
                     NQKDEKFKDCKIKGLSDEEILVYNQDFIDEHFYDTDRQKGIFTLSEENISIKQEIEKL
                     QEELMGLKSNQGENERKLKEKQEEIIKI"
BASE COUNT         2914 a          924 c         1318 g         2129 t
ORIGIN      
        1 tattggaaga tgaaaaagtt tttaatcaaa aagaagcgat aaagtaaaaa aaagttgaaa
       61 gaagcatgat gactatatat tttagagatc ttgtttcaaa taaacttgtt cgtagtgttt
      121 taagttcagc ggctattaat aaaatgggta ttgaaatttg ataaatagga catgattaaa
      181 aggcatatat taagtggaaa ggccgatgtg agtagtgata gaaatgatga tggataattg
      241 aaaattatga acttgaatat ataaaaaagt ggttttgtaa cacagaatac aaatttagga
      301 ctttttgtgc aatcttatac ggtagtgtgg atactttatt tggttttgga aagattttag
      361 agaaatgcat ccgacactaa agatacgact atgctaataa aactataggt ttagagcttg
      421 attaaatagt aagacaggat gcaaaattta ataaagagct tagttttagt aaaacgagaa
      481 tgtaaatagt aaaaagaaaa accccaattt ctggatagtt ggtatgctaa ttttaactga
      541 atttgaacaa accaatataa tagaattaaa aatattagat aggattaggt aaaggtttaa
      601 aatgcgatga tttaagtaaa aatgaaaaat ctttacttaa taaaatataa ttgtctgata
      661 aaattttcga tgaagttgaa gataaagaaa caggggataa aaaacttatt tataatctaa
      721 ataaatttaa aattttttac gaattctata agttatggaa aagtagctga cctgataaaa
      781 tttggactta gtttttagaa ctatccaaag tctacttttt tattttaaaa tgtattgtat
      841 ccttataaaa aagcaactaa taaaagttta gtaatataga ctaaataaaa ttaagtatat
      901 ttttttatat ttatacttga caaaataaca ctcaatgttg tataatactt ctagcaatca
      961 aaaaatagag tgctagaaat taaggaaaga gctatgaaaa gccgagataa aaaggattta
     1021 attttagatt ccatcatcca aacttatctt ttagataatg ttcctattgg ttcaaatgag
     1081 ttgaatttaa acctttgcat tcctgcttca accatacgcg tctatcttaa aagacttagc
     1141 aatgagggtt tgattactca gcttcatata agcagtggta gaattcctac tattttgacg
     1201 atgcaaaatt attggcaaag tttttgggaa aaagaacaag atcaagatat caatatcaaa
     1261 agtgaaaatt ttttgaaaga attaagcaaa gaatttgaaa tttattgtct tgtttatggt
     1321 ggtagaagtt tggtgcttaa agaagtgttt gatctgaatg ctaagtttat agtacttgat
     1381 tttaaagaag aagagcttgt tttaaaatat aaaaaagaag catggaattt tttacaaagt
     1441 cttataggat ttgatctttt tactatagag aaaatagctt ttagagtgca ttttacagat
     1501 cttgtagaaa aaatagctag tttaagacaa aatttgattt actatagagg caatgaagaa
     1561 agagcttatc aaatttatca aaatgatgaa tttgttaagc tcttagattg tggagttcat
     1621 cgctatttta aagaaagtct tgaatttgaa cctttattta aagaaggttt catggggatt
     1681 agggtggatg cacggttttt gggcgaagat gtaaatatta tcttagcggg tagtgtttat
     1741 acaaattata aaaaaatact acaatacata aaggaggcgg cgtgagcgag caaaagcaag
     1801 aatttgaaaa tgaaaatgca gaaaattctg aaaatttgca agatgaaaat ttgcaaaaca
     1861 ttgaagatga tgagcaaaac aaattgcaaa aagaatataa tgagttaaaa gataaatata
     1921 tgcgtgcaaa cgctgaattt gaaaatatta aaaaaagaat ggaaaaagaa aagctaagtg
     1981 ctatggctta tgcaaatgaa agctttgcta aagatttact tgatgtttta gatgctttag
     2041 aagcggccat caatgtagaa tgtcatgatg aaattagctt aaaaattaaa gaaggagtac
     2101 aaaatacttt agatttgttt cttaaaaaac ttgaaaaaaa tggagtggct cttatcaaag
     2161 aagaaaaaga gtttgatcca aatttacatg aggcaatgtt tcatgtagat agtgaaaatc
     2221 atcaaagcgg tgaggtggtt caagtacttc aaaaaggtta taaaatttct gatcgcgtga
     2281 tccgcccaac taaagttagt gtagcaaaat aaattttaat aaaaggataa aaaatgagta
     2341 aagttatagg tatagattta ggaacaacca attcttgtgt tgctgtgtat gaacgtggcg
     2401 agagtaaagt aatcccaaac aaagaaggta aaaatacaac cccttctgtg gtagctttta
     2461 cagataaagg tgaagtttta gtaggtgata gtgcaaaacg ccaagccgta accaaccctg
     2521 aaaaaaccat ttattctatt aaaagaatta tgggtttgat gataaatgaa gatgcagcca
     2581 aagaggccaa aaatagactt ccttatcata ttactgaaag aaatggtgct tgtgcgattg
     2641 agattgcagg taaaatttat actccacaag aaatttcagc aaaagtttta atgaagttaa
     2701 aagaagatgc tgaagctttc ttaggcgaga gtgttgtaga tgcggttatt acagtacctg
     2761 cgtattttaa cgatgcgcaa agaaaagcga caaaagaagc aggaacgata gcagggctta
     2821 atgtattaag aattatcaat gaacctactt cagcagcttt agcttacgga cttgataaaa
     2881 aagatagtga aaaaatcgtg gtttatgatc taggtggggg aacttttgat gttactgtgc
     2941 ttgaaaccgg cgataatgta gtagaagttt tagcaactgg tggtaatgct ttcttaggtg
     3001 gtgatgattt tgataacaaa cttatcgatt ttttagctaa tgaatttaaa gatgaaacag
     3061 gcatagatct taaaaacgat gttatggctt tacaacgctt aaaagaagca gctgaaaatg
     3121 ctaaaaaaga gttaagttca gctaatgaaa ctgaaattaa tttaccattt atcacagcag
     3181 atgcaagtgg tccaaaacac ttggtaaaaa aacttactag agctaaattt gaaggtatga
     3241 ttgactctct tgtagctgaa actatcacta aaatcaatga agtagtaagt gatgcaggac
     3301 ttaaaaaaga tgagattaaa gaaatcgtta tggtaggagg ttctactcgc gttcctttag
     3361 tacaagaaga agtgaaaaaa gcttttggca aagatcttaa taagtctgta aatcctgatg
     3421 aagttgtggc tattggtgca gcgattcaag gtgcggttat aaaaggtgat gttaaagatg
     3481 tgcttttact tgatgttact ccactttctt taggtataga aactctaggc ggagtgatga
     3541 ctaagatcat cgaaaaaggt acgactatcc caactaaaaa agagcaaatt ttctcaaccg
     3601 ctgaagataa tcaaagtgct gtaaccatca atgttttaca aggagaaaga gaatttagtc
     3661 gcgataataa atctttagga aatttcaatc ttgaaggaat tccgcctgct ccacgcggta
     3721 tgccacaaat cgaagttact tttgatatcg atgcaaatgg tattttaact gtttctgcga
     3781 aagataaagc aacaggcaag gctcaagaga ttaaaatcac aggttcaagc ggacttagcg
     3841 aggaagagat taataatatg gtaaaagatg ctgaacttca caaagaagaa gataaaaaac
     3901 gcaaagaagc cgtagatgct agaaatgcag cggatagcct tgcacatcaa gtagaaaaat
     3961 ctttaagcga attaggcgaa aaagtagctg ctgctgataa agaaaatatc caaaaagctc
     4021 ttgatgattt gcgtgagact ttgaaaaatc aaaatgcaag caaagaagag attgaaagta
     4081 aaatgaaagt tttaagtgaa gtttctcata aattagctga aaatatgtat aaaaaagatg
     4141 agccaaatgc agcaaacgat aaaaagaaaa aagatgacga tgtaatcgac gctgaagttg
     4201 agtaatcttt ttaaatcttc aatcaagcct ttttaaaaag gcttgaattt cattttatct
     4261 tatttaattt ttaaatattt tttagtggtg attttatata atatattatt aataaaaaca
     4321 caaggaacac atcatggaac aaggtcaatt ccaacccatt gtcaacttta tatggagcgt
     4381 ggcagatgat ttacttcgtg atgtttatgt aaagggtaaa taccgcgata ttattttgcc
     4441 tatgacaatc ataagaagaa ttgatgcggt tttagaacct acaaaagata aagttcttaa
     4501 aacatataat acctataaag atgaatttga aaatttagaa tctttgctag gcggaaaaca
     4561 aggaaataat ctaggctttt ttaattattc tcaatttaat ctacaaaccc ttttaaacga
     4621 tccaaaaaat ataagaataa attttgaaaa ttatcttgat tgttttagtg aaaatatcaa
     4681 agatatcatc tcaaaattca aattcaaaaa ccaacttgac actctagaag aatccaacat
     4741 actttttggc gttatagaaa gattttgctc gcctaaggta aattttggta tagaagatat
     4801 cttagatgaa aaaggtaatc ttatccataa aggcttaagc aaccttggca tgggctatgt
     4861 ttttgaagag cttatccgta aatttaacga agaaaacaac gaagaagccg gagaacactt
     4921 cactccaaga gagatcatag agcttatgac tcatcttgta tttttacctg taaaagagca
     4981 gatcaagaaa ggaacatggc tcatttatga taatgcttgt ggaagtggag gaatgctcac
     5041 tgagtcaaaa gaatttatta cagatcctaa tggtcttatc aaatcaaaag caaatatcca
     5101 tctttatgga caagagatca accccgaaac ttatgctata tgcaaggcag atatgctgat
     5161 aaaaggagaa gatccagatc acataaaatt tggctctact ttaagtaatg atcaacaaaa
     5221 tttacaattt gatttcatgc ttagcaatcc accttatggt aagtcttggg aaaatgatca
     5281 aaaaattcta ggcgtggaaa agaaaggctc aaactcaact tgcaatgacc caagatttag
     5341 agtaggtatc acaagcaaaa gtgatgggca aatgatgttt ttgctcaata tgctcagcaa
     5401 gatgaaaaca gattctccct taggctctcg cattgcaagt gtacataatg gctcatcact
     5461 ttttaactca gatagtggca tggtagctat aagaaaagat atcatagaaa aagactatct
     5521 tgaagccata gttgccctac ctacaaatat gttttataac accggcattc ctactttcat
     5581 atggattatc accaacaaaa agccagaaca taaaaaaggc aaagtttggc ttataaacgc
     5641 tacaaatgaa gagtattttt caaaaatgaa aaagtcttta ggctctaaac aaaatgaaat
     5701 gaccaaagaa catatagaaa aaattacaga attatttttg aattttacat caagcaaaga
     5761 ttgcaagatt ctagataatg aagactttgg ctatactaaa atcaccatag aaaaaccaaa
     5821 aagcatagaa gctttaagag acgatgaaaa atttgcaaaa ctcaaagata aagaaaaaat
     5881 tttagaaaaa ctacaagaac tagaacaaaa cccacaagat tttaaagaca gagaagaatt
     5941 tatcaaattt ttaggcgtaa aactcaaaaa aagcgaagaa aatctcatca tcgatagcga
     6001 taaaactaac aacacagaaa aaatcccact caaaatagat atacaaagct actatgacac
     6061 agaagtaaaa ccctatgtaa aaaattcttg gatagctcgg gaaagtgcta gcgtgggtta
     6121 tgaaatttta tttaataaat acttttatac ctacactcca ccaagaaagc taaaagagat
     6181 aaacgacgaa ttagaaaagc tagaaaaaga agtgcaagat cttttaagag agatcatgca
     6241 atgaaaaatt tcaaagatag tggtatagaa tggcttgggg aaattccaga gcattgggaa
     6301 gtggtaaaaa tcaagcatat ttctgaagtt gttacaggaa aaacacctgc tttagatttt
     6361 gagtggggtg ataatatgct ttttgttaca ccaactgatt gtgatttaga taagaagtat
     6421 atttcatcat cacttaggaa attatcgcaa aaagggataa aaaattttga ctcacttata
     6481 attcccaaaa actctatttt ggtaacttgt atagcttcta ttggaaaagt agtgattaat
     6541 cctgaaaagg ttgttactaa tcaacaaatc aattctgtga ttcctaatct tggtttggtg
     6601 tcaccggatt ttatttttta tcaactgtta gtaacaatgc cctttgcaga aagatatttt
     6661 tgtggatata gtattttacc aattctcaac aagagtgaat tttcaaatat taaaatcccc
     6721 cttccacccc taaaagaaca agagcaaatc gcaaattttt tagatgaaaa atgcgaaaaa
     6781 atagatttat tgatagaaaa aaccaaaagc aaataaaact cataaaagaa tacaaaacca
     6841 cgctcataaa ccaagccgta tgcggtagga tggatttata gaaaggagaa acaatgatta
     6901 ctaaaatttc tatgaaaaat atagcaagtt ataaagatga aacaagttta gaaacaaata
     6961 aacgcattaa tttgatttat ggtttaaatg gaataggaaa aacacaaatc tctaaatttt
     7021 tagcaaatca aaaagatgaa aaatttaaag attgcaagat aaaaggttta agtgatgaag
     7081 aaattttagt ttataatcaa gattttattg atgaacattt ttatgatacg gatagacaaa
     7141 aaggtatttt tacactctct gaagaaaata taagtataaa acaagaaatt gaaaaattgc
     7201 aagaagaatt aatgggatta aaatctaatc aaggtgaaaa tgaaagaaaa ttaaaagaaa
     7261 aacaagaaga aataataaaa ataga
//
LOCUS       DAPWAA010000076         7180 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.076, whole genome shotgun sequence.
ACCESSION   DAPWAA010000076 DAPWAA010000000
VERSION     DAPWAA010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7180)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7180)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7180
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.076"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            122..1156
                     /locus_tag="RTF91_001525"
     CDS             122..1156
                     /locus_tag="RTF91_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDZ4944390.1"
                     /translation="MKKYILLLSLCLSLNLSAKSISDYKVGEELSDKEGVEYFKELSK
                     KPVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTESTLGPYGKLKKTNNEINCISCH
                     MDNKGNGLPGTKKHVLPFLNVLNSYPKLDIETMKIVSVEDRIRGMGGTDSHKFPNDSK
                     EMKAILAYFKWLKEAYGVKDGVKLEGTFLSKMDFPNRPANPVHGQRLFKENCVTCHGE
                     KGLGVKNDNYKQGTGHLYPSLLYPEGGHMVMIPFLARFLKSSTHFSTNSKNISNADIV
                     DIAAYVNTGFVRIPMATTENRDGPDTAYSKTPSLKPEYFASPQQILDPQKYIKAKYGP
                     WKNPNYFPEQ"
     gene            complement(1157..2530)
                     /locus_tag="RTF91_001526"
     CDS             complement(1157..2530)
                     /locus_tag="RTF91_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HDZ4944391.1"
                     /translation="MQNLNQNEQIKCPSCGSFIDISAALYTQILSRAKEEIQKEQQQM
                     LKQKQEFENEVSAKRAEYTKAFNDLKAQKIDQEKFINEQVSQKILLEKEKFNQELLMQ
                     KQNFQKEFSEKFQKEHANEMKIIQEELEEKSKELSEFLSVKAENEKLKREQKENEERL
                     KFQAKEEAFKEFKEQESKNLEFEREKMRLEFQKNTQEQDLKYKELETNFKSVAQKLED
                     AQRRIEQGSQQLQGEAAELLIEEYIQSEYLSDEVKEVPKGVNGADCLHVVKDSFGNVC
                     GSILYESKRTKEFNKEWLDKLKLDSIAAKSDIAVLITKTMPKDKEKTHFKEGILICTF
                     SEFKGVLAVLRESVINAYKLKNALQNKDEKNHILYEYLNSKEFNTQITFILKTYQNMK
                     EELEAEKRALQNIWKKRERAIENLSFNSTAIVSSLNAIFSDLQGGNLIGEEGIKSLEN
                     LGKFPPN"
     gene            2634..3830
                     /locus_tag="RTF91_001527"
     CDS             2634..3830
                     /locus_tag="RTF91_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HDZ4944392.1"
                     /translation="MQKHTKIQGFAKFKLIIILALMSSIAPLSTDMYLPALSHVEQSF
                     QTNSFLTQLSIASFFIAFALGQLIYGPLSDIFGRKIPALVGIFFFIISSLFCVIIDDI
                     YAFIALRFFEALGGCAGVVIARAIVNDLFEIKEAAGIFALMMVFSSLAPMLSPTFGGI
                     LLEYFSWHSIFTTLFALGILLFLMILFGLKESAPYVKNKKFSHHEAMKSYKFVLSDKR
                     FLVYILCASFALAAMFAYITGSSFVFTQFFSLSEQKFALLFGVNALGFVICANVNAKL
                     VLKYESEKILAKALMIMFISTIILLVNAFFHPNFLLFELSIFTSIAMLGFIAPNTTTL
                     AMARFKEHSGTASAVLGTVQFGFAGLISFVVGAVDANTPIILACVMCACVLVANMIYF
                     LTKIKE"
     gene            3833..4534
                     /locus_tag="RTF91_001528"
     CDS             3833..4534
                     /locus_tag="RTF91_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDZ4944393.1"
                     /translation="MKTNNLFLSLAIILASLILAFGFNKALSDFKTLERSVTVKGLSQ
                     KDVEADTLILPIKFTRSNNNLTNLYEELEQDKQNIIKFLEEQGVKEGEISYNSPNIID
                     RLSDPYSNDTQAAYRYIGTANLLIYTQNVKLGKSILEKISSLGKLGIVIKIDDYDIEY
                     LYTKLNEIKPQMIEEATLNARNAAVKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYI
                     KTIRVVSTIEYYLKD"
     gene            complement(4724..5358)
                     /locus_tag="RTF91_001529"
                     /pseudo
     CDS             complement(4724..5358)
                     /locus_tag="RTF91_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001900010.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5348..5779)
                     /locus_tag="RTF91_001530"
     CDS             complement(5348..5779)
                     /locus_tag="RTF91_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4065 domain-containing protein"
                     /protein_id="HDZ4944394.1"
                     /translation="MVSALDLAKYILKKSNKELSNLELQKTLYFTELDYIKKFNKHLI
                     KDEFEAWKYGPVSREVYCEYRNYGANSIDKPEQENLSSILDKDKLDVIDTAINNCNQE
                     TYWDLVERSHKKGGAWEKSFKEDSKEIIKKELIKKEALNES"
     gene            complement(5911..>7180)
                     /locus_tag="RTF91_001531"
     CDS             complement(5911..>7180)
                     /locus_tag="RTF91_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HDZ4944395.1"
                     /translation="GNKEKSTLNFSNAHFEDNAYFNNSKFYSYADFHECEFEKIACFY
                     GVTFEKAPNFSQVIFKGNLNIVNTSLNFTFDDLQKRIKQEYEDFNKTKEEQDKKPLDK
                     FANDFRDSFRTFKNALVKDNNLLDASNFHKCELYCKEIELKQNWDKKGENVKNTTDLE
                     KNVSRIRDFVDFLLLGFYRKLCDHHTDFLKVFNNLILLIGLYILFIFVGSFEFNLEKN
                     SIQNLNKTLDMFSYLTKVKQAIINFSLIQQYYDYILISFVAVCFICLVVIFYKIFKNI
                     KLDFIIIKNIIFKDIIKSILNLCAYLLFLLIILIYINIYIPKNQNNLNILSNIGIFFT
                     FCIFYLWTVCLNTLFLRYIFICISYIIVIISMGANITILNPFIGKLINDKIFSNDPLF
                     IYLTFAYTILIFLVLFSLQKTARKNSIVPS"
BASE COUNT         2402 a         1098 c         1010 g         2670 t
ORIGIN      
        1 aaatttccaa tcaatattga tcatattatg ccttataaaa atttattttt atgtaaattg
       61 ttcttaatat ttaagaaaat acattaaaat cagattgaac tacaaaaaaa ggaggaaaat
      121 catgaaaaaa tacattttat tgcttagttt atgtcttagt ttgaatctta gcgctaaaag
      181 cataagtgat tacaaagtag gagaagagtt aagcgacaag gaaggagtgg aatattttaa
      241 ggagctttct aaaaaacctg tgcaagaatg gccaaataaa aatttaagca tcaatgatgt
      301 tccaaaaggc aaacaaggag atttaatccg ttatggtata gagcttttaa gcaaaacaga
      361 aagtacgcta gggccttatg gcaaactaaa aaaaacaaat aatgaaataa attgcatttc
      421 ttgccatatg gataacaaag gaaatggtct acctggaact aaaaaacatg ttcttccatt
      481 tttaaatgtg ttaaacagct atccaaaact tgatatagaa acaatgaaaa ttgtctctgt
      541 tgaagataga attcgcggaa tgggtggaac tgactctcat aaatttccta atgattctaa
      601 agaaatgaaa gcaattttgg cttattttaa atggctaaaa gaagcttatg gagtcaaaga
      661 tggtgtcaag cttgaaggaa cttttctttc taaaatggat tttccaaatc gcccagccaa
      721 tcctgtgcat ggtcaaagac tttttaaaga aaactgcgtt acttgtcacg gagaaaaagg
      781 acttggggta aaaaatgata attacaaaca aggaactggg catttatatc catctttgct
      841 ttatcctgaa ggtggtcata tggttatgat accattttta gcaagatttt taaaatcatc
      901 tacgcatttt agcacaaatt ctaaaaatat aagcaatgca gacattgtag atatagcagc
      961 ttatgtaaat acaggttttg tgagaatacc tatggcaact acagaaaatc gtgatggacc
     1021 agatacagct tatagcaaaa ctccatcatt aaaacctgag tattttgctt caccacaaca
     1081 aattctagat cctcaaaaat acataaaagc aaaatatgga ccttggaaaa atccaaacta
     1141 ctttccagaa caataactaa tttgggggaa attttcccaa attttcaaga cttttaatcc
     1201 cctcttcgcc tatcaaattt ccaccttgca agtcgctaaa tatagcattt aaagaactta
     1261 ctatagcggt ggaattaaag cttaaatttt ctatagccct ttctcttttt ttccatatat
     1321 tttgcaaagc tcttttttca gcttctaact cttctttcat attttgataa gttttgagta
     1381 taaaagtgat ttgagtgtta aattccttag aatttaagta ttcgtataaa atgtgatttt
     1441 tttcatcttt gttttgcaag gcatttttta gcttataagc gtttataacg ctttctctaa
     1501 gcacagctaa aacaccttta aattcgctaa aagtacagat taaaattcct tctttaaaat
     1561 gcgttttttc tttatctttt ggcatggttt tggtaattaa aaccgctata tcgctttttg
     1621 cagctatgct atctagtttg agtttatcaa gccattcttt gttaaattcc ttggtgcgtt
     1681 tactctcata caaaatactt ccacaaacat ttccaaaact atcttttact acatgcaagc
     1741 aatccgcacc atttacgccc tttggcactt cttttacctc atcgcttaaa tactcacttt
     1801 ggatatattc ttctatgagt aattcagctg cttcgccttg gagttgctgc gagccttgtt
     1861 ctatcctgcg ttgtgcatct tctagctttt gggctacgct tttaaaattg gtttctaatt
     1921 ctttgtattt aagatcttgc tcttgagtgt ttttttgaaa ttcaagacgc attttttctc
     1981 tttcaaattc caaattcttg ctttcttgct ctttaaattc cttaaaagct tcttcttttg
     2041 cctgaaattt taatctttct tcattttctt tttgttctct ttttagtttt tcattttcgg
     2101 cttttacgct tagaaattcg ctgagttctt tacttttttc ctcaagttct tcttgtatga
     2161 ttttcatttc atttgcatgc tctttttgaa atttttcgct gaattctttt tggaaatttt
     2221 gcttttgcat aagaagttct tggttaaatt tttctttttc taggagaatt ttttggctga
     2281 cttgttcgtt tatgaatttt tcttgatcga ttttttgggc ttttaaatca ttaaaagctt
     2341 tggtatattc ggctcttttt gcactcactt cattttcaaa ttcttgtttt tgctttagca
     2401 tttgttgttg ttctttttga atttcttctt tggctctact taaaatttgc gtgtataaag
     2461 ccgcacttat atcgataaaa cttccacaac ttggacattt aatttgctca ttttggttta
     2521 aattttgcat aaaaatttcc ttagaatttt ttcctaaatt taacatagaa aaacaaagat
     2581 tattataaga ttgacttgct aaaatcattc ttttaaaata attaggatta caaatgcaaa
     2641 aacacactaa aattcaaggc tttgctaaat ttaaactcat cattatcctt gccttgatgt
     2701 caagcatagc tccgctttct acagatatgt atttgcccgc actttctcat gtggagcaaa
     2761 gttttcaaac gaattctttt ttaacccaac ttagtattgc aagttttttt atcgcttttg
     2821 ctttaggaca gcttatatat gggcctttaa gcgatatttt tgggcgtaaa attccggctt
     2881 tggtggggat atttttcttt attatttcga gtttgttttg tgtgattatc gatgatattt
     2941 atgcttttat tgctttgaga ttttttgaag cacttggagg ctgtgcagga gtggtaatcg
     3001 caagggctat tgtcaatgat ttgtttgaga tcaaagaagc agcagggatc tttgctttga
     3061 tgatggtttt tagctccctt gctcctatgc tttcgccgac ttttggggga attttgctag
     3121 agtatttttc atggcatagc atttttacga ctttgtttgc tttgggaatt ttactttttt
     3181 tgatgatact ttttggttta aaagagtccg caccctatgt taaaaataaa aaattttccc
     3241 accacgaagc gatgaaaagc tacaaatttg ttttaagcga taaacgcttt ttggtttata
     3301 tactatgtgc ttcttttgct ttggcggcta tgtttgctta tatcacggga tcaagctttg
     3361 tttttacgca attttttagc ctaagcgagc aaaaatttgc cttgcttttt ggagtaaatg
     3421 ctttaggttt tgtcatctgt gcgaatgtta atgcgaaatt ggttttaaaa tacgaaagtg
     3481 aaaaaatcct agcaaaggct ttgatgataa tgtttatatc gactataatt ttgcttgtca
     3541 acgccttttt tcatccaaat ttcttgcttt ttgaacttag catttttaca agtatcgcta
     3601 tgcttggctt tatcgcgcct aataccacga ctttagctat ggcaagattt aaagagcata
     3661 gcgggacggc ttctgcggtg cttggaacag tgcaatttgg ttttgcaggg cttatttcct
     3721 ttgtagttgg agctgttgat gcaaacacgc ccataatcct tgcttgtgtg atgtgtgctt
     3781 gtgttttggt tgcaaatatg atatattttc taactaaaat aaaggagtga aaatgaaaac
     3841 aaataatctt tttttgtctt tagccataat tttggcaagt ttgattttag cctttggctt
     3901 taataaagct ttaagcgact ttaaaacact tgaaagaagt gtaaccgtaa agggactaag
     3961 ccaaaaagat gtggaagcgg atactttgat acttcctata aaatttacaa gatcaaacaa
     4021 caatcttaca aatttatacg aagaactaga gcaagataaa caaaacatca tcaaattttt
     4081 agaagaacaa ggcgtaaaag agggtgagat cagctataac tcaccaaata tcatcgaccg
     4141 cttaagcgat ccttatagta atgacactca agctgcgtat agatacatag gcactgcaaa
     4201 tttactcatc tatacccaaa atgtaaagct tggaaaaagc atattagaaa aaatttcaag
     4261 ccttggaaag cttggcatag tgataaaaat agatgattat gatatagaat acctttatac
     4321 caagctaaat gagataaaac ctcagatgat agaagaagca acactcaatg ctagaaacgc
     4381 agcggtaaaa ttcgcacaag attcaaacag tcatttaggc aagataaaaa aagcttccca
     4441 agggcaattt agcatcagca atagagacaa aaatacccct tatatcaaaa ccataagagt
     4501 agtttctact atagaatact acttaaaaga ctgattacaa gacttagcta agctttaaag
     4561 cttagcttga tttttcgtct ggtttttgtt ttaaaaaatc aatcatagct agtatatcat
     4621 ctatggtttt tatattaaac agataacaca taaagtcaat tgacataatc gctaatataa
     4681 taatattaaa aataatcaac aaccgattag tttgaaagtg gatatttaaa gaaatcttta
     4741 taagaaaggc aaataaaaaa taaagaatat tccctacaaa taaagctata aaagccataa
     4801 caaaaaccaa tcggtaaatg cttgctttat ctatattgga aagaatagaa tttgaaaata
     4861 ccaaaccgct aacaaatgtc aaaacaatag aagcaaagat acctaatatt gttatatatt
     4921 gggtttgttg tttgttaaga ttttcactaa gctctttata atttttatca agctctttat
     4981 aagtattttg caaacggctt attttttcac tagaatcttg caacctaaca cactctaaat
     5041 taacatgatc ataaaatttt gcaattcttg attttatatc ttgtaaattt gcaatttctg
     5101 gttttgtatt ttgcgaataa gaatctaatt tttttcaaat tctcgcaaat tttgtgctaa
     5161 tatcatcaag tcttgctcgg gatcatttct tatagcattc aatattatag ttgtaagttc
     5221 tgaataatta tgcttaaatc cttcttgata aattttgaat aaatttgcaa taatgtcatc
     5281 gacattgcta aaaatttgtt ccttacataa tttttcaata atagaacgca actgactatt
     5341 tttctcgtca cgattcattt aaggcttctt tttttattaa ttctttcttg attatttctt
     5401 ttgagtcttc tttaaaactt ttttcccaag caccgccttt tttgtgactt ctttcaacaa
     5461 gatcccaata agtttcttga ttacaattat ttatggcagt gtcaattaca tccaacttat
     5521 ctttatcaag aatgcttgat aaattttctt gctctggctt atcaatagaa ttagctccat
     5581 aattacgata ttcacaataa acttccctag aaacaggtcc atatttccaa gcttcgaatt
     5641 catccttaat aagatgttta ttaaatttct taatatagtc aagctctgtg aaatataaag
     5701 ttttttgcaa ctctaggtta cttaactctt tatttgattt tttgagaata tattttgcta
     5761 aatctaaagc actaaccata ttttacccct tagcaatttt tattttttcg aaatcgaatt
     5821 ttatcttatc aatataaata tttaaaatac cttaacaatt ttaaaaattt gatattttta
     5881 taggatattt gtaatattct aacattcaaa tcaacttggc actatggaat ttttgcgtgc
     5941 ggttttttgg agtgagaaaa gaactaaaaa tattaaaata gtataagcaa atgttaaata
     6001 tataaacaaa ggatcatttg aaaatatttt atcattgata agttttccaa taaaaggatt
     6061 taaaatagtt atattagcac ccatagatat aataacaata atataactta tacatataaa
     6121 aatatatctt agaaataatg tatttaaaca taccgtccat aaataaaaaa tacaaaatgt
     6181 aaaaaatatt cctatattag ataaaatatt taaattattt tgattttttg gaatataaat
     6241 gtttatataa attaagataa ttagcaaaaa taataaataa gcacataaat ttaatatact
     6301 tttaattata tctttaaata ttatattttt aattattata aaatctaatt ttatattttt
     6361 gaaaatctta taaaatatta ctacaagaca aataaaacaa acagcaacaa aagaaattaa
     6421 aatataatca taatattgtt gtataagtga aaaatttatg attgcttgct tgacttttgt
     6481 caaataagaa aacatatcta aagttttgtt taaattttgt atagaatttt tttccaaatt
     6541 aaactcaaag cttcctacaa aaataaacaa aatatacaaa ccaattagca atataaggtt
     6601 attaaaaact tttaaaaagt ctgtgtgatg atcgcaaagc tttctataaa atcctaaaag
     6661 taaaaaatcc acaaaatctc gaattctcga aacatttttt tctaaatctg tcgtattttt
     6721 tacattctca ccttttttat cccaattttg ttttagctct atctctttac aataaagctc
     6781 acatttatga aaatttgaag cgtctaaaag attgttatct tttaccaaag catttttaaa
     6841 agttctaaaa gaatctctaa aatcattggc aaatttatct aaaggttttt tatcttgctc
     6901 ttctttagtt ttattaaaat cttcatattc ttgtttgatt ctcttttgta aatcatcaaa
     6961 agtaaaattt aaacttgtat taactatatt taaatttcct ttgaaaatca cttgagaaaa
     7021 atttggagct ttttcaaatg ttactccata aaaacaagca attttttcaa attcgcattc
     7081 gtgaaaatca gcataactat aaaatttgga attattaaaa taagcattat cttcaaaatg
     7141 agcatttgag aaatttaatg ttgatttttc tttatttcca
//
LOCUS       DAPWAA010000077         7093 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.077, whole genome shotgun sequence.
ACCESSION   DAPWAA010000077 DAPWAA010000000
VERSION     DAPWAA010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7093
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.077"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..3004)
                     /locus_tag="RTF91_001532"
     CDS             complement(<1..3004)
                     /locus_tag="RTF91_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDZ4944396.1"
                     /translation="MFKLAINRPITVLMFFLALMIFGLISAFSMSVNLFPNVSIPLIK
                     ITSKVNGDLNFVESKVTKEIENALSEIDGVKTITSAAYDNFSISVVEFKLGKNLEVAA
                     NDVRDKIGTLSLPSKPEIEKISSDSGSAISLFLYSKDKLQLMREINDKIKPFLQRVDG
                     VGKIETKGFLEPQIRIELKPNELRKYNLNALDVANIIKSQNFKQALGELNNNQNNYII
                     KGYFEATNLEELNNLRIKTGIFLSDIANISSLYEDEKQSALYEGKEGVLLELGKITNY
                     NTLEMIKNVKNALPNLEKQISKDISISVLYDKSLNIQKHLSQVIFDMILGIFLTLIIV
                     FLFLRNLSATLIACIAIPTSIISTFFIIDLLGYDLNRLTFIALTLSIGIFIDDAIVVI
                     ENISKKLKTYPPLQAAFLGINDIGFSVLSISIVLLCVFIPISYMNSIPGLFFNALGIS
                     VASGIVISFLVSVFLIPSLGARFLNPKESKFYEKTKTFFEKIEQKYENLLYKILQNKA
                     KFILATLIFVGLSFALATRIGLDFLPMEDDSEIQVLLESKKDLSLEAMKEKSLNLLEK
                     IQNNNNVKYAFLLVGYDDAKDATKARIYVKLKNLDERNLRQSAIVSLYRQKFQDESLK
                     IKILELPKIESAGIDDPVQFLVLGDDLNTLKEAASRAKEILSTNARIVDINDNANATK
                     DEVALHINKEKAKLLDVNPEYIAGVLGYSFSQLSVGSMDRGNSKDDIILSFAPEFKKD
                     IEALKRISIKNNQGLNLELSSVVDFIYSKDLKTINRYNKNRSVKITAGVNDLSLGEVQ
                     KLLLTNMDKILNNNANLSYAFSGFINLLGETVQGFTMAIALAFVLIYLVLAALYESFI
                     LPLIIMITMPLAFGGTSIGLFITGHNFSLFVLIAIILLFGMVGKNAILLVDVANKKCH
                     EGLDPDKALLIAGKSRLRAILMTTFAMIFAMLPLALSRGAGYEANSPMAIAIIFGLIS
                     STLLTLLVVPALFKFCFKLDSRLRKIYER"
     gene            complement(3007..3747)
                     /locus_tag="RTF91_001533"
     CDS             complement(3007..3747)
                     /locus_tag="RTF91_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDZ4944397.1"
                     /translation="MKKILFLLLAFNLAFSEEIYASFNVEASKQSKLALESIGLVQTI
                     SVEIGQKVKKGELLLALDQESEKIALENAQNSYQLALVDYEYTKSKMQKIKAVANIID
                     KQSYEDMKAKFDAANLNLNKAKINITYYKNILAKKELRAPYDAIIANKFIQVGEGVGG
                     VAQPLIEIFSYPQSKLILSFDEKYKDKVKLGDDFFYKIDQNSTEFKGKISLIYPSIEV
                     KTRKIYAEVETANLTPGLFGEGRIITKD"
     gene            complement(3744..5003)
                     /locus_tag="RTF91_001534"
     CDS             complement(3744..5003)
                     /locus_tag="RTF91_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDZ4944398.1"
                     /translation="MRFINIILFLPLVLFGSNLKELINLSQNNESYFIKQMQSEQANL
                     NRQQAFRNYLPTLSLNSAYVANNKDRFITDPQESLFAKVSLNFLLFDGGAREANLRAL
                     ESKEKLSLLDKEQSKNYLTLNAITLYFNTLSLEKILLANQQKVAFLKSTFERLQKFYN
                     AGLSPKDELESIKAKYHLSLLELSQNELKLANIQKEIKILSHTDFKPKGDALLENPQQ
                     EKSRNYEVMITKEQINLAKESVNLAKAKYFPKFYIQDNFSFYKNIFNPKIPTPFANLA
                     DNFLEKYSQGNQFILGMEWKIFDFNARTKEVEKERLNVQIANANARFSERKNKEELNY
                     LNKSLKVLQEQILALNLSLNAANLAFESVDKKYQAGLVSYVEYLQALEAKFKAQSDLE
                     LAKNEFEITKANYYFNAGIDLNSKVKE"
     gene            complement(5048..>7093)
                     /locus_tag="RTF91_001535"
     CDS             complement(5048..>7093)
                     /locus_tag="RTF91_001535"
                     /inference="COORDINATES: protein motif:HMM:TIGR01783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDZ4944399.1"
                     /translation="MNKIFNSFLLIFISTNLTLAKESSYELGAISVVGSVEKGSQSVD
                     YFSPKSISVISSKQIQEEGAKQLDEITRYESGFISQIYGADLDTTDWIKLRGFDASLV
                     LDGTAIYKGGYFGWSPDLYGLEKIEIIKGADSLNYGSSQSGGVINLVSKRPQKTPIAE
                     IGAKIGNLSQNGLFFDVGDKTFNTNSNFRIVGNYFRQNGQLDGTWQEHYYFAPSLAID
                     INDDTFLTLLTSFQYDQGIPTTGFFPIYGTIIDTPQGTIKPSTNLGSPLSDYLKRKQY
                     SLGYEFIHYFNDKLSFMQNYRYNMENKSQFAVSFSALDLNNPDMAKRSSIILDGIARS
                     HTLDNRLVLKNSYKELENTLTGGIDYQYIYVNGKYGFGSASDINIFNPIHIPQIKSKV
                     PTYLVKQSQLGLYVQDRSKLYDKWVLDLGMRFDKAKNNAKSFGSKSNYNVNHATFQTG
                     LMYIFEDLGLMPFISYSEAFRPIAGSDGQGKDYKPYESRQYEAGFKYLPYFIDDGELI
                     FSYFDIQEKNALVNANPSASIPVSIQAGKQDAKGIELSSNIALSESINYALAYTHYFQ
                     THTSLNALKIIRTPMMPKDVFATKISHTLKINHKQNFKSSFGIRYIGSSTDEAGNVGI
                     KVPSYTLYDLAFGYNYNKWNAQLNINNIFNKKYVSGCYYSCYYGEGIKGILSISYKY"
BASE COUNT         2301 a         1123 c         1038 g         2631 t
ORIGIN      
        1 ctctctcata aatttttctt aatctactat caagtttaaa acaaaattta aaaagtgcgg
       61 gaactacaag caaggtaagt aaagttgagc ttataagtcc aaagataatg gctattgcca
      121 taggggaatt cgcttcatag cctgcacctc ttgaaagagc aagtgggagc atagcaaaaa
      181 tcatagcaaa agttgtcatt aatatagctc ttaagcgtga ttttccagct attaaaagag
      241 ctttatcagg atctaagcct tcatggcatt ttttattggc tacatctacg agtaaaatgg
      301 catttttccc taccatgcca aaaagcaaga taatggcaat aagtacaaaa agtgaaaagt
      361 tgtgtcccgt gataaaaagc cctatagaag tcccaccaaa ggctaaaggc atggttatca
      421 tgatgattaa aggtaaaata aaactttcat aaagcgcggc taaaacaaga taaatcaaaa
      481 caaaagcaag agctattgcc atagtaaaac cttgcacagt ttctcctaaa agattgataa
      541 aacctgagaa agcatagcta agatttgcat tgttatttaa aattttatcc atattagtca
      601 gtaaaagttt ttgcacttct cctaaggaaa gatcattaac tccagctgta atttttactg
      661 agcggttttt attataacga ttgatggttt ttaaatcttt gctgtatata aaatctacta
      721 cacttgaaag ttctaaattt aaaccttgat tgtttttaat actaatgcgt tttaaggctt
      781 ctatatcttt tttaaattct ggagcaaaac ttaagatgat atcatctttt gaatttcctc
      841 tatccatgct tcctacgcta agttgtgaga aagaataccc taaaacccct gcaatgtact
      901 caggattgac atccaaaagt ttagcttttt ctttattgat atgtagagcc acttcatctt
      961 ttgttgcgtt agcattatca tttatatcca caatgcgtgc attagtgctt aaaatttctt
     1021 ttgcacgaga cgctgcttct tttagagtgt ttaaatcatc tcctaaaacc aaaaattgca
     1081 ctggatcgtc aatgcctgca ctttctattt ttggaagttc taaaattttg atttttaaac
     1141 tttcatcttg aaatttttga cgatataagc ttactatggc actttgcctt aaatttcttt
     1201 catctaaatt tttaagttta acataaattc tagcctttgt agcatcttta gcatcatcgt
     1261 atcctacaag taaaaaagca tatttgacat tgttattgtt ttgaattttt tcaagtaaat
     1321 ttaaactttt ttctttcatg gcttctaagc ttaaatcttt tttgctttca agtaaaactt
     1381 gaatttcgct atcatcttcc ataggtaaaa aatcaagccc tatacgcgta gctaaagcaa
     1441 aagaaagtcc tacaaaaata agagtagcta agataaattt agctttattt tgtaaaattt
     1501 tatagagtaa attttcgtat ttttgttcta ttttttcaaa aaaagtcttt gttttttcat
     1561 aaaatttact ttcttttgga tttaaaaatc ttgctccaag gctaggtatt aaaaacacag
     1621 aaaccaaaaa gcttataact atcccacttg caacgcttat gcctaaggca ttgaaaaaaa
     1681 gccctggtat agagttcata taagaaatag gaataaaaac acaaagtaaa actatactga
     1741 tgcttaaaac actaaaacct atgtcattga tacctaaaaa agcagcttgt aaaggtggat
     1801 aagtttttaa ttttttagag atattttcaa tgaccactat agcatcatcg ataaaaatcc
     1861 ctatgcttaa agtcagggct ataaaggtta aacggtttaa atcatagccc aaaagatcga
     1921 taataaaaaa agttgaaatg atagaagtag gtatagctat gcaagcaatg agtgttgcac
     1981 ttaaatttct taaaaataaa aacacgataa taagggtcaa aaaaatcccc aaaatcatat
     2041 caaaaataac ttgagaaagg tgtttttgga tatttaagct cttatcgtaa agcacgctaa
     2101 tgcttatatc ttttgaaatt tgtttttcta aattaggtaa ggcatttttg acatttttaa
     2161 tcatttcaag ggtgttataa tttgtgattt tacctagttc taaaagcact ccttctttac
     2221 cttcatataa agcactttgt ttttcatctt cataaagact tgaaatatta gcaatatcgc
     2281 ttaaaaatat ccctgttttt atgcgaagat tgttaagttc ttctaaattt gtggcttcaa
     2341 aatagccttt gataatatag ttgttttgat tattattaag ttcgcctagg gcttgtttga
     2401 aattttgact tttgataata ttagccacat caagggcgtt aagattatat tttctaagtt
     2461 catttggttt taattctatg cgaatttgag gctctaaaaa ccccttagtt tcgatttttc
     2521 caactccatc aaccctttgc aaaaaaggct tgattttatc attaatctca cgcatgagtt
     2581 gtaatttatc tttagaatat aaaaaaagtg aaatagcaga accagaatca gagctgattt
     2641 tttcaatttc aggtttagaa ggcaggctta aagttcctat tttatcacgt acgtcattag
     2701 ctgccacttc aagattttta cccagtttaa actctactac actaatgcta aaattatcat
     2761 acgcagctga agttatcgtc tttactccat cgatttcgct tagggcattt tctatttctt
     2821 tggtaacttt tgattctacg aaatttaaat ccccatttac tttgcttgtg atttttataa
     2881 gaggtataga aacattggga aataaattta cactcatact aaaagcagaa atcagtccaa
     2941 aaatcattaa agccaagaaa aacattagca cggtaatagg tcgatttata gctagtttaa
     3001 acatttttaa tctttagtga taattctgcc ttcgccaaaa agccctggtg ttaaatttgc
     3061 agtttcaact tcagcataaa tttttcttgt ttttacttct atgcttggat aaataaggct
     3121 gatttttcct ttaaattccg tgctattttg atcgattttg taaaaaaaat catcacctag
     3181 tttaacttta tctttatatt tttcatcaaa acttaaaatt agcttgcttt gtggatagga
     3241 aaaaatttct attaaaggtt gagctactcc tcctactcct tcaccaactt gtatgaattt
     3301 atttgcaatg atggcatcat aaggtgcacg caattctttt ttggctaaaa tgtttttata
     3361 ataagttata ttgatttttg ctttgtttaa atttaaatta gctgcatcga acttagcttt
     3421 catatcttca tagctttgtt tatcgatgat atttgcaacg gctttgattt tttgcatttt
     3481 gcttttggtg tattcataat ccacaagggc aagttgataa gaattttgag cattttcaag
     3541 ggctattttt tcactttctt gatcaagagc aagtaaaagt tctccttttt tgactttctg
     3601 cccaatttct acagagattg tttgaaccaa acctatactt tcaagagcaa gcttgctttg
     3661 ttttgatgct tctacattaa aacttgcata aatttcttca ctaaaggcga gattaaaagc
     3721 aagaagtaaa aatagaattt ttttcattcc ttaacctttg aattaagatc tatacctgca
     3781 ttaaaataat aatttgcttt agtaatttca aattcatttt tagcaagctc taaatcactt
     3841 tgtgctttaa atttggcttc taaagcttga agatattcca cataagaaac aagtcctgct
     3901 tggtattttt tatccacact ttcaaaagct aaattagcag catttaaact aagattaaga
     3961 gctaaaattt gttcttgtaa aacttttaaa cttttgttta aataatttaa ttcttcttta
     4021 tttttgcgtt cactaaatct tgcatttgca tttgctattt gaacatttaa acgttctttt
     4081 tctacctctt tagttcttgc attaaaatca aagattttcc attccatacc caaaataaac
     4141 tgattgcctt gagagtattt ttccaaaaaa ttatcagcta aatttgcaaa aggagttggg
     4201 atttttggat tgaaaatgtt tttataaaag ctaaaattgt cttgaatata aaattttggg
     4261 aaatacttgg cttttgctaa atttacgctt tctttggcaa gattaatttg ttccttggtt
     4321 atcattactt cataatttcg acttttttct tgttgtggat tttctaaaag agcatctcct
     4381 ttgggtttaa agtctgtatg acttaaaatt ttaatctctt tttgtatatt agcgagtttt
     4441 aattcatttt gacttagctc tagtaagctt aaatgatatt tggctttaat gctttcaagt
     4501 tcatctttag ggctaagtcc tgcattgtaa aatttttgca gcctctcaaa agttgatttt
     4561 aaaaaagcca ccttttgctg attggctagt aaaatttttt caaggcttag ggtgttaaaa
     4621 taaagtgtga ttgcatttaa ggtaagataa tttttacttt gttccttgtc taaaagactt
     4681 aatttttctt tgctttctaa agctcttaaa ttagcctctc ttgcacctcc atcaaaaagc
     4741 aagaaattaa gagaaacttt agcaaataaa ctttcttgtg gatcagtgat aaagcgatcc
     4801 ttgttgtttg ctacataagc tgagtttagg ctaagagtgg gtaaataatt tctaaaagct
     4861 tgttgtctgt ttaagtttgc ttgttcactt tgcatttgtt taatgaaata tgattcgtta
     4921 ttttgactta aatttataag ttcttttagg ttagaaccaa acaataccaa aggtagaaat
     4981 aagataatat ttataaatct cataaactag agtataacat atttaagctt atgagaaatt
     5041 agtattgtta gtatttataa gaaatggata aaattccttt gatgccttca ccataatagc
     5101 aagaataata gcatccactg acatattttt tattgaaaat attgttaata tttaattgag
     5161 cattccattt gttataattg tatccaaaag caagatcata aagtgtgtat gaaggtactt
     5221 taataccaac atttccagct tcatcggtgc tacttcctat atagcgaatt ccaaagctgc
     5281 ttttaaaatt ttgtttatga ttgattttta aggtgtgaga aattttagtg gcaaaaacat
     5341 cttttggcat cattggtgtt cttataattt ttaatgcatt taaagaggtg tgggtttgaa
     5401 aataatgtgt atacgctaaa gcataattta tactttcact taaggctata tttgagctta
     5461 attcaattcc tttagcatct tgctttccag cttgtataga tacgggtata gacgcacttg
     5521 gattggcatt aactagggca tttttttctt ggatatcaaa gtaagaaaaa ataagttctc
     5581 catcgtcaat aaaataagga agatatttaa aaccagcttc atattgtctg ctttcataag
     5641 gcttgtaatc cttgccttgt ccgtcgcttc cagctatagg tctaaaggct tcagaataac
     5701 ttataaaagg cattaatcct agatcttcaa atatatacat caagccagtt tgaaaagttg
     5761 catgatttac attgtaattg cttttgcttc caaagctttt tgcattattt ttggctttat
     5821 caaaacgcat accaagatct aaaacccatt tatcatatag tttagatcta tcttgtacat
     5881 ataagcctaa ttgagattgt ttaactagat atgtgggtac tttgcttttt atttgcggga
     5941 tgtgaatagg attaaagata ttgatatcgc ttgcacttcc aaagccatat tttccattta
     6001 catagatata ttgataatct attccacctg taagggtatt ttcaagttct ttataactgt
     6061 tttttaaaac cagtctatta tctaaggtat gacttcttgc tataccatct aagataatag
     6121 agcttctttt agccatgtca ggattattta aatctaaggc tgaaaagctt acagcaaatt
     6181 gacttttatt ttccatattg tagcgatagt tttgcataaa agacaattta tcattgaaat
     6241 aatgaatgaa ttcataaccc aaagaatatt gttttctttt taaataatca cttaaaggtg
     6301 atcctaaatt tgtgcttggt ttaattgttc cttgcggtgt atcaatgatg gttccataaa
     6361 taggaaaaaa gccagttgta ggaattcctt gatcgtattg aaaactagta agaagtgtta
     6421 aaaaagtatc atcatttata tctatagcta agcttggcgc aaaatagtaa tgctcttgcc
     6481 aagttccatc aagctgtcca ttttgtctga aataatttcc tacgattcta aaattactat
     6541 ttgtgttaaa agttttatct ccaacatcaa aaaataagcc attttgagat aaatttccta
     6601 ttttagctcc aatttctgct ataggagttt tttgaggtct tttgctaact aagttgatca
     6661 cgccaccgct ttgagaagat ccgtagttta aagaatcagc ccctttgatg atttctatct
     6721 tttctaaacc atataaatca ggagaccatc caaaatatcc acctttataa atagctgttc
     6781 catctaaaac taaactcgca tcaaatcctc ttaatttgat ccaatctgtc gtatccaaat
     6841 ccgccccata aatttgagaa ataaatccac tttcataacg ggtaatctca tcaagttgct
     6901 tcgcaccttc ttcttgaatt tgtttagaac tgattacaga aatgcttttt gggctaaaat
     6961 aatctacact ttgacttcct ttttcaacag atcctacaac gctaatagca ccgagttcat
     7021 aagatgattc ttttgctaaa gttaaatttg tgcttatgaa gatgagtaaa aaagaattga
     7081 atattttatt cat
//
LOCUS       DAPWAA010000078         6973 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.078, whole genome shotgun sequence.
ACCESSION   DAPWAA010000078 DAPWAA010000000
VERSION     DAPWAA010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6973)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6973)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6973
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.078"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(150..581)
                     /gene="cas2"
                     /locus_tag="RTF91_001536"
     CDS             complement(150..581)
                     /gene="cas2"
                     /locus_tag="RTF91_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HDZ4944400.1"
                     /translation="MIEDKFMRVLLMFDVPTKSKQEQKLASKFRNNLIKLGYFMLQFS
                     VYMRICKGLSSAKSSIENVKKILPPYGNIRVLIITEKQFDKMEFLLGGVVFNEKVNNE
                     TNLTLFDIDSHGEFKYKNSNNEEVQINKKQEKYRQQNLFEF"
     gene            complement(574..1464)
                     /gene="cas1"
                     /locus_tag="RTF91_001537"
     CDS             complement(574..1464)
                     /gene="cas1"
                     /locus_tag="RTF91_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HDZ4944401.1"
                     /translation="MSYDEAFKTVLISSNAKLNLELNHLVIKQDEDIAKLFLKDINIV
                     VLESLQASLSSALFNAFAKYKIILLTCDETHSINGVFSPFLGHFQSAKIAKEQMNVST
                     QKKAILWQKIIKNKVINQAFVLKKHNKIKESNELVNLAKKVSLNDSKNIEAVAAALYF
                     KTLFGASFSRDELCFHNAALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNAFALC
                     DDLIEVFRASVDSCVLELKGESEFLRKDDKRALIGNLQSKINFDGQNYPLNRAINHYV
                     ANFKNALLYEGELKIVNFDD"
     gene            complement(1461..4418)
                     /gene="cas9"
                     /locus_tag="RTF91_001538"
     CDS             complement(1461..4418)
                     /gene="cas9"
                     /locus_tag="RTF91_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863842.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HDZ4944402.1"
                     /translation="MAKILAFDIGISSIGWAFVENDELKDCGVRIFTKAENPKTGESL
                     ALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGTLISPY
                     ELRFKALNELLSKQDLARVILHIAKRRGYDNIKNSDDKEKGAILKAVKENEEKLANYK
                     SVGEYLYKEYFQKFKENSKEFINVRNKKESYERCIAQSFLKDELKLIFQKQREFGFNF
                     SKKFEEEVLSVAFYKRALKDFSHLVGNCSFFVDEKRAPKNSPLAFEFVALTRIVNLLN
                     NLNKNNSYIKDDLNALLSEVLKNGTLTYKQTKKILGLSDDYEFKGQKGNYFIEFKKYK
                     EFIKALGEHNLNQDDLNEIAKDITLVKDETKLKKALAKYDLNQNQIENLSKIEFKDHL
                     NISFKALKLIVPLMREGKKYDEVCNELNLKTAINEDKKEFLPAFNETYYKDEVNNPVV
                     LRAIKEYRKVLNSLLKKYGKVHKINIELAREVGKNHRERSKIEKEQNENFKAKKDAEL
                     ECEKLGLKINSKNILKLRLFKEQKEFCVYSGEKIKISDLQDEKILEIDHIYPYSRSFD
                     DSYMNKVLVFTKQNQEKLNKTPFEAFGKDDVKWQKIETLAKNLPAKKQKRILDKNYKD
                     KEQKDFKDRNLNDTRYIARLVLNYTKDYLEFLPLSDDENIKLNDTQKGSKVHVEAKSG
                     MLTSVLRHTWGFSTKDRNNHLHHAIDAVIIAYANASVVKAFSDFKKEQENYTAELYAK
                     KINELDFKNKRKFFEPFSNFRQKVLEKIDEIFVSKPERKKPSGALHEETFYKEEEFYK
                     EYGGKEGVLKALELGKIRKVNGKIVSNANMFRVDIFKYKKTNKFYAVPIYTMDFALGI
                     LPNKAVVGGKDKQGIIKDWLLMDENYEFCFSLYKDSLILLQTKDMQEPELVYFKSFKS
                     STAGLVVSKHDNKFENLNENQKKLFKSANEKKVVAEGIGIQNLKVFEKYIVSALGEIT
                     KAEIKERENFKKK"
     gene            4621..5653
                     /gene="dcuC"
                     /locus_tag="RTF91_001539"
                     /pseudo
     CDS             4621..5653
                     /gene="dcuC"
                     /locus_tag="RTF91_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831351.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
     gene            complement(5713..6702)
                     /locus_tag="RTF91_001540"
     CDS             complement(5713..6702)
                     /locus_tag="RTF91_001540"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDZ4944403.1"
                     /translation="MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDNVVGGIGSFAGA
                     FRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLVCNFATPLFFL
                     DYYATAKLEVEVAKAVVLGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMA
                     EEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDVL
                     LEPTRIYVRDFLALKPYINALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYT
                     IGQIVEESEMYRSFNMGVGLVMVVDPSNVSKILESSDAFIIGEIVINEGVILE"
     gene            6763..>6973
                     /locus_tag="RTF91_001541"
     CDS             6763..>6973
                     /locus_tag="RTF91_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDZ4944404.1"
                     /translation="MKNAFFVTASIACGKSTFIEIANSLGFKSISADKISHEILNENA
                     LELEKIFSQFSLKNLLTKEQKIDRKI"
BASE COUNT         2253 a         1222 c          839 g         2659 t
ORIGIN      
        1 ttttaccaaa taacgaaatt ttcaaggttt ttaaaagact tttgacaaaa aatattaaaa
       61 ttatgctata atttttctaa gaaatttaaa aagggactaa aataaagagt ttgcgggact
      121 ctgcggggtt acaatccctt aaaaccgcat taaaattcaa ataaattttg ttgacgatat
      181 ttttcttgtt ttttatttat ttgaacttct tcgttatttg aatttttgta tttaaattct
      241 ccatgactgt ctatatcaaa aagcgttaga ttggtttcat tattaacttt ttcattaaaa
      301 accacaccac caagcaaaaa ctccatttta tcaaactgct tttcagttat gattaaaacc
      361 cttatatttc cataaggtgg caaaatcttt tttacatttt caatagaact ttttgcagaa
      421 cttaaaccct tgcaaatacg catataaacg ctaaattgca gcataaaata gcccaacttt
      481 atgagattgt ttctaaattt actcgctaat ttttgctctt gcttgctctt agttggcaca
      541 tcaaacatca aaagcacacg cataaattta tcttcaatca tcaaaattta ctatctttaa
      601 ctcaccttca taaagcaaag cgttcttaaa atttgctaca taatgattta tggctctatt
      661 taaagggtag ttttgcccat caaaattaat tttactttgt aaattgccaa tcaaagctct
      721 tttatcatct tttcttaaaa actcactctc acctttaagc tctaaaacac agctatcaac
      781 actagctcta aatacttcta ttaaatcatc gcaaagtgca aaagcattat aaatattatc
      841 atgctttatg ccaagccaag gcaaaagccc acttatgcaa actgctctaa taatacaagc
      901 tctaataatt gcatagccat aatttaaagc tgcattatga aaacaaagct catctcttga
      961 aaaagaagca ccaaaaagag ttttaaaata caacgccgct gcaacagctt caatattttt
     1021 actgtcatta aggcttactt ttttagctaa attcacaagc tcattacttt cttttatttt
     1081 attgtgcttt tttaaaacaa aggcttgatt tatgacttta tttttaatga tcttttgcca
     1141 taaaatagct tttttttgag tgcttacatt catttgctct ttggctattt ttgcactttg
     1201 aaaatgccct aaaaatgggc taaaaacacc atttatacta tgggtttcat cacaagttag
     1261 caagatgatt ttatactttg caaaggcatt aaaaagtgca gaactaagac ttgcttgcaa
     1321 gctttctaaa acgacgatat tgatatcttt taaaaacaat tttgctatat cttcatcttg
     1381 tttaattaca agatgattta actctaaatt aagcttagca ttagagctga ttaacactgt
     1441 tttaaaagct tcatcataac tcattttttc ttaaaatttt ctctttcttt aatttcagcc
     1501 tttgtgattt ctccaagagc tgaaactatg tatttttcaa aaacttttag attttgaatt
     1561 cctatacctt ctgctacaac ttttttttca tttgcacttt taaataattt tttttgattt
     1621 tcgtttagat tttcaaattt attatcgtgt tttgaaacaa ccaaaccagc tgtagagctt
     1681 ttaaaagatt taaaataaac caattcaggc tcttgcatat ctttagtttg tagcaaaatt
     1741 aagctatctt tatataaaga aaagcaaaac tcataatttt cgtccattaa aagccaatct
     1801 tttataattc cttgtttatc cttgcctccc accacggcct tattgggtaa aattcctaaa
     1861 gcaaaatcca tagtgtaaat tggcacagca taaaatttat ttgtcttttt atacttaaaa
     1921 atatccactc taaacatatt agcattacta acgattttac catttacttt acggatttta
     1981 ccaagctcta aagcttttaa aaccccttct tttcccccgt attctttata aaattcttct
     2041 tctttgtaaa aagtttcttc gtgcaaagct ccgcttggtt tttttctttc aggttttgaa
     2101 acaaaaattt catcaatttt ttctaaaacc ttttgtctaa aattactaaa aggctcaaaa
     2161 aatttccttt tatttttaaa atctagctca ttaatttttt tcgcataaag ctccgctgtg
     2221 tagttttctt gctctttttt aaaatcagaa aaagccttga caacagaagc atttgcataa
     2281 gctataatga ctgcatcaat ggcgtgatga agatggttgt ttctatcctt agtactaaag
     2341 ccccaagtgt gtcttaaaac agatgttagc ataccacttt tagcttctac atgcaccttt
     2401 gagccttttt gagtatcgtt tagctttatg ttttcatcat cacttaaagg taaaaattct
     2461 aaataatctt tagtgtaatt taaaacaagt cttgctatgt agcgtgtgtc gtttagattt
     2521 ctatctttaa agtctttttg ctctttatct ttgtagtttt tatcaagaat tcttttttgt
     2581 ttttttgcag gtaaattttt tgctaaagtt tcaatttttt gccattttac atcatctttt
     2641 ccaaaggctt caaaaggagt tttgttgagt ttttcttgat tttgtttagt aaaaactaaa
     2701 actttattca tataagaatc atcaaaactt ctagaataag gataaatatg gtcaatttca
     2761 agtatttttt catcttgtaa atcgcttatt ttaatctttt caccactata aacacaaaat
     2821 tctttttgtt ccttaaataa tcttagtttt aaaatatttt tactatttat ttttaagcct
     2881 aatttttcac actcaagctc agcatctttt ttggctttaa aattttcatt ttgttctttt
     2941 tcaattttac ttctttcgcg atgattttta cctacttctc ttgctaattc aatgtttatt
     3001 ttatgtactt taccatattt tttaagcaag gaatttaaga cttttctata ttctttaata
     3061 gctcttaaaa ccacaggatt atttacttca tctttgtaat aagtttcatt aaatgcgggt
     3121 aaaaactctt ttttatcttc attaatggct gtttttaaat taagctcatt gcaaacttca
     3181 tcgtattttt taccttccct catcaaaggc acgattagtt ttaaagcttt aaaactaata
     3241 tttaaatggt ctttaaactc aattttactt aaattttcaa tttgattttg atttaaatcg
     3301 tattttgcta aagctttttt aagtttagtt tcatctttta caagagtgat atcttttgct
     3361 atttcattta aatcatcttg atttaaatta tgctcaccta aagcttttat aaattcttta
     3421 tattttttaa actcgataaa ataatttccc ttttgtcctt tgaactcata atcatcactt
     3481 aaacctaaaa tcttttttgt ttgcttataa gttaaagtgc cattttttaa aacttcgctt
     3541 aaaagtgcat ttaagtcatc ttttatgtat gaattgtttt tattaagatt atttaaaaga
     3601 ttaacaatcc ttgtaagtgc tacaaattca aaagctagag gggaattttt cggtgctctt
     3661 ttttcatcca caaaaaagct acaatttccc actaaatgag aaaaatcttt taaagctctt
     3721 ttataaaatg ctacactaag cacttcttct tcaaactttt ttgaaaaatt aaagccaaat
     3781 tctctttgtt tttggaagat aagctttaat tcatctttta aaaaactttg tgcgatacaa
     3841 cgctcatagc tttctttttt atttctaaca tttataaatt ctttagaatt ttctttgaat
     3901 ttttgaaaat attctttgta aaggtattca cccacacttt tataatttgc tagtttttct
     3961 tcattttctt ttacggcttt taaaatcgca cctttttctt tatcatcgct atttttaata
     4021 ttatcataac cacgcctttt tgcaatgtgc aaaatcactc ttgctaaatc ttgcttgctt
     4081 aaaagctcgt ttaaagcttt aaatcttaat tcataagggc taattaaagt ccctttataa
     4141 gccttagcta aactctcatc aaaactttga taatcttcat aatttaactt aaactcatta
     4201 gcaatcaagt gctttaagtg attaagcctt gctttacgtc tagcaaggcg ttttctagca
     4261 cttcttgcaa ggcgtcttgg caacgctagc gattctcctg ttttaggatt ttcagccttt
     4321 gtaaaaatcc taactccaca atcttttaat tcatcatttt ctacaaacgc ccaaccaata
     4381 gaacttatac ctatatcaaa tgctaaaatt tttgccatga tatacccttt tggatattta
     4441 tgatttattt ataattataa tacaaaaatc ttttttatgc aaacacaaat ttttagcaac
     4501 caaactatac atatattaat tttataatgc aaaaaacgag taaaatttta aataaacata
     4561 tttattagtt aaattttagt taaaatagaa taaaagctaa caataattct aggagaaatc
     4621 atgccaattg ttatgatatg ttctacactt ttaggggtga ttgttgttgc ttattatata
     4681 cttaaaaaat acaatcctat ttttgtattt ttcctttcag gtattatctt gcttattttt
     4741 gctttttaca tcacaggaac acctatacca aaagccccaa atagagaaca cacaaacttt
     4801 ttaaatgttt tgcttgatag ttatgctttt atcacagcaa cttttaaaag tcagctttgt
     4861 ggagttggac ttatcatcat gagtgtagca ggttttgctg cttatatgaa acatatcaat
     4921 gcttcggcaa aacttgcttt tttagcaaac aaaccttatt tatagcgtga ttgcttatgt
     4981 ggtggttatg gctattttaa tcccttttta ctttgtttgg attgataaaa gagataaaga
     5041 aaaaggagtt ttaaatgatg aagttgaaat tccacaaatc attgatccta aatgccctac
     5101 tttttatata ctttttcctt ggttgcctgt tatattttta tttacagcgt atttttttac
     5161 aatcaaactc gatgttgtaa ccgcaaattt tataagcatt tctttgattt ttctcgttga
     5221 atttgcaaga cacaaaaacg ctaggaaatt gggtgaagat atgatggtta ttttaaaagc
     5281 tatggctgaa attttcatct ccgttgtaag cataatcatc gctgctggag tctttgccga
     5341 aggcattaaa gcactaggtg gaattaatat tcttgctaat gcagtttcag atcttggaac
     5401 aggaaatttt gcatggtttg gaattctttt gagtataact attttaagct ttttggttta
     5461 ttttaccaca gtaattatgg gaagtgggat tgccgccttt aatgcttttg gaaaattagc
     5521 tcctgatata gccacaaaat taggtgttgc acctattacc ttagttttgc ctatagaaat
     5581 agcatcgtgt ctaggtcgtg cagcttcgcc catagcaggc ggaatcataa ctttagctgg
     5641 atttgcaaaa gtagatccaa acactacaat agaacttaaa atacaaaaat aaagcatatc
     5701 aacgctttat tttcactcca aaatcacacc ttcattaatt acgatttcac caattataaa
     5761 agcatccgaa ctttctaaaa tcttacttac attagatgga tctacaacca ttactaaacc
     5821 tacacccata ttaaaacttc tatacatttc actttcttct acaatttgtc ctatggtata
     5881 aaaaatttca ggagttttaa gatgatgttt acgtatagtt gcacccatgc cacgaggtaa
     5941 aacacgaggt aaattttcta ctaaaccacc acccgtaatg tgcgctaaag cattgatata
     6001 aggctttaag gcaagaaaat cacgcacata aattcgagta ggctctaata aaacatcgat
     6061 taaattttta ccctctatct tatcatcaaa ttttaatttt aagctttcaa aaagtacttt
     6121 tctagctaaa gaatagccat ttgaatggag tcctgaacta ggaagtgcta acaaaatatc
     6181 accattttta acaaatttac ttctatcgat ctcatcttct tcagccatac ctaccgcaaa
     6241 gcccgcaaga tcaaaatcat ctttcgcata cattccaggc atttcagcag tttctccgcc
     6301 aattaatgca caatttgcca ttttacatcc cttagcaatg cctaatacaa cagcttttgc
     6361 tacttctact tcaagcttag ccgtagcgta ataatccaaa aaaaacaaag gtgtagcaaa
     6421 attacaaacc aaatcattca cacacattgc tactaaatct tgccctatag tatcatactt
     6481 tttagcatca atagctaagc gaagtttagt accaacacca tctgttgcac ctaaaatcac
     6541 aggcttttta aaaccacttg gcattctaaa agcaccggca aaagagccaa ttccaccgac
     6601 aacattatca ttaaaagttt ctttaaccaa aggttttata gcctctacaa aggcatttcc
     6661 attatctata cttacacctg catcttcgta tgaaattttc atttattttc ctttaagaac
     6721 taaaaaggta ttttaacgaa aaaaatttta ataaggcata agatgaaaaa tgcttttttt
     6781 gtaaccgctt caattgcttg tggcaaaagc acctttatag aaatagccaa ttctttaggt
     6841 tttaaaagca ttagtgcgga taaaatctct catgaaattt taaatgaaaa tgctttagag
     6901 cttgaaaaaa tcttttctca atttagctta aaaaatttac ttacaaaaga acaaaaaatc
     6961 gatagaaaaa tcc
//
LOCUS       DAPWAA010000079         6900 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.079, whole genome shotgun sequence.
ACCESSION   DAPWAA010000079 DAPWAA010000000
VERSION     DAPWAA010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6900
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.079"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..980
                     /locus_tag="RTF91_001542"
     CDS             <1..980
                     /locus_tag="RTF91_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDZ4944405.1"
                     /translation="STPNQDKIKDEKQEKSRESVKENPKFYETKTESKTSINTNTNAL
                     NTNTSNAQNLNNSQNIQPNNNQTMQNVFKNQEFIKQNIVKNLAFSVENLDLEQAQDLS
                     KNLSNLSRRLNESLKELEPHTQNAKFNQAELKNLEHKLGLSVKDLAQIKPKTEQDITE
                     SLHHDVKSTLLQISNLAKNEGNEAIYNQANRLLAQIEINQLMSLANDSINTYLPFSWD
                     DLNDSKIMFRRGKKDKFFAQIKLEFAKLGDLEILISLSNEKYIDIHIMAENIEFRKTI
                     YKNAHELKRNINKAGLLSANFFVGDIIRSKFDTRNMKNLDLEMGMDKKV"
     gene            977..1258
                     /locus_tag="RTF91_001543"
     CDS             977..1258
                     /locus_tag="RTF91_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlhB-like flagellar biosynthesis protein"
                     /protein_id="HDZ4944406.1"
                     /translation="MSKIKRSIKKAVALGYQREKNSAPKVLASGKGESAAKIISLAKE
                     HGVPIKEDEDLIEILSKLDLGDEIPPNMYKAVAEVFAFIYQMANKTPKN"
     gene            complement(1255..2055)
                     /locus_tag="RTF91_001544"
     CDS             complement(1255..2055)
                     /locus_tag="RTF91_001544"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDZ4944407.1"
                     /translation="MSFSKESSRLFGFVAGIKFPKIIQKIINKNYVKYFKIDMSEFKT
                     PCEYESLNALFTRTLQISRKLQEGFISPSDGKILECGSTFLANEEHFAFSIKGHTYGV
                     QELLKDSFEKDELKNGLDYVNIYLSPKDYHRYHSPCDMRILSATYTNGTLYSVNEKHL
                     KRISNLYIKNERVSLKCQNEKGIFWLIFIGAQNVGKMRFNFDTSIQTNAKSSHNFTRK
                     YENLNFKKGEELGNFELGSTIVLISQKGLLNFNLKAGKSVKFGEKIAD"
     gene            complement(2052..3176)
                     /locus_tag="RTF91_001545"
     CDS             complement(2052..3176)
                     /locus_tag="RTF91_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDZ4944408.1"
                     /translation="MMFLIFSFIVLLIFGLANVYIYKRLIKKIILFKYFYKFFAFIFI
                     LLFLAQAVFLIFHRDEYLSDTWYEILAMLYAPTYCLFFVTLAWDFVKLIATFMGKRHK
                     KYNLILCLIFEFSLIFLSIFLIYVSVNNALKIPEIKSIDIQISNLKRDLKIALLTDIH
                     LGKNLHESFLDKLIIKVNLQKPDMVVIVGDLVDTNPKDLENYISKLNDFNSTYGTFYA
                     LGNHEYYHGIDEVLDLLRKYTNMKILVNQNLDLGFINIAGLGDLAGLNKGLYAPDLER
                     IKVDLNTSKASILLAHQPKTALLYDLGVFDLVLSGHTHGGQIFPFMFLVKLQQGFVHG
                     LYNLGEKTKLYVSSGAGFWGPSLRVFAPSEIVILNLKGKK"
     gene            3262..4557
                     /locus_tag="RTF91_001546"
     CDS             3262..4557
                     /locus_tag="RTF91_001546"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDZ4944409.1"
                     /translation="MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKA
                     RNIAGKEEEIKELLNLFGISWQHYYIQSENLKFHRQMALKLVSEKKAFACFCTEEELK
                     IKKELAKKQNKAYRYDGTCEKLADIDVLGCEKPFVIRLKKPTHTMKFVDFIKGELSFE
                     PENIDSLVIMRTDKTPTYNFACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNK
                     AMTYAHLPIILNEEGVKMSKREAHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTL
                     EEAIKWFDISKVSKAPARFDLKKLLQINREHIKMITDNELNKILDLNKDLAQLAKFYT
                     QEASTIKELKEKMRAIFNIKDYGEFETECKILKELLKDIELFKSYEDFKNELLNKSNL
                     KGKKFFMPLRIILTGNIHGPELSDLYPYIKKFIHELARI"
     gene            4560..4841
                     /locus_tag="RTF91_001547"
     CDS             4560..4841
                     /locus_tag="RTF91_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDZ4944410.1"
                     /translation="MVIDFFIISIFQVLQIVVNIYTWIIIITALLSWVNPDPYNPIVQ
                     ILYKLSYPAYALVRKIPTRIGNIDLAPLIIVLALQFFSIFLGNILRSIL"
     gene            4838..6463
                     /locus_tag="RTF91_001548"
     CDS             4838..6463
                     /locus_tag="RTF91_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HDZ4944411.1"
                     /translation="MIKKILIFLFIFSSLKATQYNIEELKKEENSLAKDYYIYRLLEK
                     KQINKKDAQDLNSHIFRYIGKIKSELEKIIPLKPYINPKYTKCYTYTPNTILDANLTC
                     QSVRLNSLVFIASLNSKDRITLAQTFKNQRPDLTNLLLAFNTSDPMNYIVQKEDINGF
                     FKLYNYSKKYDLNLNTSLVNKLPNHVGFKDFAQNIIIKKENPQFRHSMLKINPENVSE
                     DSAFYLGINALTYDKTELAYNFFKKAAQSFKTQSNKDNAIFWMWLIKNNEEDLKTLSQ
                     SFSLNIYSLYAKELTNAPFPKIESLNPSKKKNNFNMQDPFAWQKINKQIRDANASQLD
                     ILAKEFDTQETLPIYTYILERKNNFKKHYFIMPYYENIKDYNKTRQALILAIARQESR
                     FIPTAISVSYALGMMQFMPFLANHIGEKELKIPNFDQDFMFKPEIAYYFANHHLNYLE
                     SRLKSPLFVAYAYNGGIGFTNRMLARNDMFKAGKFEPFLSMEFVPYQESRIYGKKVLA
                     NYIVYRHLLNDSIRISDIFENLIQNKTDDLNKS"
     gene            complement(6360..6845)
                     /locus_tag="RTF91_001549"
     CDS             complement(6360..6845)
                     /locus_tag="RTF91_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944412.1"
                     /translation="MKIYSVILGAFLLGACSLKDQAVVDTNLKSQTLMFTQKYKITQD
                     KINAIVAMSYLNPILDKTSKDDVLALSFTPNTLKIQNLEVFINNKKANIEKLDEGYLK
                     YIIQNNYTDYFKISLPSVKEETRLVAKICLNHLSCFELNFQKYPKSLYYRSEDVDTQY
                     N"
BASE COUNT         2666 a         1060 c          889 g         2285 t
ORIGIN      
        1 attctactcc aaatcaagat aaaattaaag atgaaaaaca agaaaaatca agagaaagcg
       61 ttaaagaaaa tccaaaattt tatgaaacaa aaacagaaag taaaacttca atcaatacaa
      121 acactaatgc tttaaacact aacacaagca acgcgcaaaa tttaaacaat tctcaaaata
      181 ttcaaccaaa caataaccaa actatgcaaa atgtttttaa aaatcaagaa tttataaaac
      241 aaaatattgt aaaaaattta gcatttagtg tagaaaattt agatctagag caagctcaag
      301 atttaagtaa aaatttaagc aatctttctc gcagacttaa tgaaagtttg aaagaacttg
      361 aaccccatac tcaaaatgcc aaattcaatc aagcagagct taaaaatcta gaacacaaac
      421 tcggtctttc tgttaaagat ctagcacaaa ttaaaccaaa gactgagcaa gatataaccg
      481 aatctttgca tcatgatgta aaatcgacac ttttacaaat ttcaaattta gctaaaaatg
      541 aaggtaatga agctatatat aatcaagcta atcgtctttt agcgcaaatt gaaatcaatc
      601 aactcatgtc cttagctaat gattctatca acacttatct acctttttct tgggatgatt
      661 taaatgactc taaaatcatg tttagacgcg gaaaaaaaga taaatttttt gcccaaatta
      721 aactcgaatt tgcaaaactt ggagatttag aaattctcat ttctttaagc aacgaaaaat
      781 atatagatat tcatattatg gcggaaaata ttgagtttag aaaaactatt tataaaaatg
      841 ctcatgagct taaaagaaat atcaataaag caggactttt gagtgcaaat ttctttgtag
      901 gtgatatcat aagaagtaaa tttgatacaa ggaatatgaa aaatttggat cttgagatgg
      961 gtatggataa aaaagtatga gcaaaatcaa aagatcgatt aaaaaagctg tagccctagg
     1021 ttatcaaaga gaaaaaaatt ccgcaccaaa agttcttgca agtggcaagg gtgaaagtgc
     1081 tgctaaaatc atttctttag ctaaggaaca cggagttcct attaaagaag atgaagattt
     1141 aatagaaatt ttaagtaagc ttgacttagg tgatgaaatt ccgcctaata tgtacaaagc
     1201 tgtagctgaa gtttttgcct ttatctatca aatggcaaat aaaactccta aaaactaatc
     1261 cgctattttt tctccaaatt ttacactctt ccctgctttt aaattgaaat ttaaaagccc
     1321 tttttgagaa atcaaaacta tagtagagcc tagttcaaaa tttcccaatt cttcaccttt
     1381 tttaaaattt aaattttcat attttctagt aaaattatga gaacttttag cattggtttg
     1441 tatacttgta tcaaaattaa aacgcatttt tcctacattt tgcgccccta taaaaataag
     1501 ccaaaaaata cccttttcat tttgacattt taaactcact ctttcatttt ttatatataa
     1561 attactgatg cgttttaaat gtttttcatt cacactgtaa agtgttccat tcgtataagt
     1621 cgcacttaaa attcgcatat cacaaggact gtgataacga tgataatctt ttggagaaag
     1681 atagatattg acataatcaa gcccattttt aagctcatct ttttcaaagc tatcttttaa
     1741 aagttcttgg acaccataag tatgcccttt tatagagaaa gcaaaatgtt cttcatttgc
     1801 caaaaaagta cttccacatt ctaaaatttt accatcactt ggactgataa agccttcttg
     1861 aagctttctt gaaatttgca aagttctcgt aaaaagagca tttaaactct catattcaca
     1921 aggagtttta aattcactca tatcgatttt aaaatattta acataattct tattgatgat
     1981 tttttgtatt attttaggaa atttaatccc tgctacaaaa ccgaaaagtc ttgaactttc
     2041 ttttgaaaag ctcatttttt tccttttaaa tttaaaataa ctatttcact tggagcaaaa
     2101 actctaagac ttggccccca aaatcctgct ccactgctaa cataaagttt agttttttct
     2161 cctaaattat aaagcccatg cacaaagcct tgttgaagct taaccaaaaa cataaaaggg
     2221 aaaatttgcc ctccatgtgt atgcccgctt aaaacaagat caaaaactcc taaatcataa
     2281 agtaatgctg ttttaggttg atgcgcaagt aaaatactag ctttgcttgt atttaaatcc
     2341 acttttattc tttctaaatc aggagcatat aaacccttgt taagtccagc taaatctcca
     2401 agtccagcaa tatttataaa acctaagtct aaattttgat taaccaaaat tttcatattt
     2461 gtatattttc taagtaaatc taaaacttca tcaataccat gataatactc gtgattaccc
     2521 agagcataaa aagttccata agtggaatta aaatcattaa gttttgagat ataattttct
     2581 aaatccttag ggttagtgtc aactaaatct cctactatta caaccatatc aggtttttgc
     2641 aaattgactt taataatgag tttatctaaa aaactttcat gcaaattctt acccaaatgt
     2701 atatctgtta ataaagcgat ttttaaatct cgtttaagat tagatatttg aatgtcaata
     2761 ctcttaattt caggtatttt cagggcatta tttacactta cataaatcaa aaatatgctt
     2821 aaaaatataa gagaaaactc aaaaatcaag cataagataa gattatattt tttatgtctt
     2881 ttacccataa aagttgcaat cagtttaaca aaatcccaag ctaaagtcac aaaaaataaa
     2941 caataagtag gagcataaag catggctaaa atttcatacc aagtatcgct taaatattca
     3001 tctctatgga atatcaaaaa cactgcttga gctaaaaaaa gcaaaataaa aataaaagca
     3061 aaaaatttat aaaaatattt aaaaagaata attttcttga tcaatctttt ataaatataa
     3121 acatttgcta agccgaaaat caataacaca ataaaagaaa aaattaaaaa catcataaaa
     3181 gtattataac ctaataaaat taaatatccg tataaatttt tctgttataa taatctttta
     3241 aataaattta aaggctataa aatgtaccgt tttgcacctt ctcccacagg tgatatgcac
     3301 ataggaaatc ttcgtgcagc aatttttaat tatatctgtg caagacaaaa aaatatggat
     3361 ttcatcttac gcatcgaaga tactgataag gctagaaata tagcaggaaa agaagaagaa
     3421 attaaagaac ttttaaatct ttttggcatt tcatggcagc attattatat acaaagtgaa
     3481 aatttaaaat ttcatcgcca aatggcttta aaacttgtaa gtgaaaaaaa agcttttgct
     3541 tgcttttgta ccgaagagga acttaagata aaaaaagagc ttgccaaaaa acaaaataaa
     3601 gcttatcgct atgatggtac ttgtgaaaaa ttagcggata ttgatgtttt aggatgtgaa
     3661 aaaccctttg ttattcgcct taaaaaaccc actcatacaa tgaaatttgt agattttatt
     3721 aaaggtgaat taagctttga acctgaaaat atagactctc ttgtaattat gagaacagat
     3781 aagactccaa cttataattt tgcttgtgca gttgatgata tgcttgaaaa tgttacttgc
     3841 attatacgcg gcgaagatca tgtttcaaat actccaaaac aagaacatat ccgtgcaagt
     3901 ttaggttata ataaagctat gacttatgca cacttgccta tcattctaaa cgaagaaggt
     3961 gttaaaatga gcaaaagaga agcacattct tcagtaaaat ggctgcttga aagcggaatt
     4021 ttacctagcg caattgcaaa ttatcttatc atgctaggca ataaaactcc ttgtgaaatt
     4081 ttcaccttag aagaggctat aaaatggttt gatatttcta aagtttccaa agctcctgca
     4141 aggtttgatc ttaaaaaact tctacaaatc aatcgcgaac atatcaaaat gataacagat
     4201 aatgaactta ataaaatttt agatttaaac aaagatcttg cacaacttgc taaattttat
     4261 actcaggaag caagtactat caaagaactt aaagaaaaaa tgcgggctat ttttaacata
     4321 aaagattatg gtgaatttga aacagaatgt aaaattttaa aagagctttt aaaggacatc
     4381 gagctcttta aaagctatga agattttaaa aatgaacttt taaataaaag caacttaaaa
     4441 ggtaaaaaat tttttatgcc tttaaggata attttaacag gaaatatcca cggacctgaa
     4501 cttagcgatc tttatcctta tattaaaaaa tttattcatg aattagcaag gatttaacaa
     4561 tggttataga tttttttatt atttctattt ttcaagtact tcaaattgtt gttaacattt
     4621 atacttggat tattatcatc acagcacttt taagctgggt aaatcctgat ccttacaatc
     4681 ctatagtgca aattttatat aaactaagct atcctgctta cgccctagtt agaaaaattc
     4741 caacacgcat aggcaatatt gatcttgcac ctttaattat agttttagcc ctgcagtttt
     4801 ttagtatttt tcttggaaat atcttaagga gtatattgtg ataaaaaaaa tactcatttt
     4861 tttatttatc ttttcaagct taaaagctac gcaatataac atagaagaac tcaaaaagga
     4921 agaaaattca cttgctaagg attattatat ttacagactt ttagaaaaaa aacaaatcaa
     4981 taaaaaagat gcgcaagatt taaattctca tatttttcgt tacataggaa aaattaaatc
     5041 cgagcttgaa aaaattatcc ctttaaaacc ttatatcaat ccaaaatata ccaagtgtta
     5101 tacctataca ccaaatacta tcttggatgc aaatttaaca tgtcaaagtg tgcgattaaa
     5161 ctcattggtt tttatagcaa gtttaaattc caaagaccga atcactttag cccaaacctt
     5221 taaaaatcaa agacctgatt tgacaaattt attactagct tttaatactt ctgatcctat
     5281 gaattatata gtacaaaaag aagatattaa tggctttttt aagctttata attattctaa
     5341 aaaatacgat ctaaatttaa atacaagttt agttaacaag ctgcccaatc atgttggttt
     5401 taaagatttt gcacaaaaca ttatcattaa aaaagaaaat ccccaattta gacattctat
     5461 gctaaaaata aatcctgaaa atgtaagcga agattctgct ttctacctag ggatcaatgc
     5521 cttaacttat gataaaacag agcttgctta taattttttc aaaaaggcag ctcaaagttt
     5581 taaaacccaa agcaataaag ataatgctat attttggatg tggttaatta aaaacaatga
     5641 agaagattta aaaactttat ctcaaagttt ttctttaaat atttatagtc tctatgcaaa
     5701 agaacttact aatgcacctt ttccaaaaat agaaagtcta aatccaagta agaagaaaaa
     5761 taacttcaat atgcaagatc cttttgcttg gcaaaaaata aataaacaaa ttcgtgatgc
     5821 taatgcaagt caactagaca ttttagcaaa agaatttgac acacaagaaa ccttgcctat
     5881 ttatacttac atattagaac gcaaaaataa ttttaaaaaa cattatttta taatgcctta
     5941 ttatgaaaat ataaaagatt ataacaaaac aagacaggct ttaattttag ccattgctag
     6001 acaagaaagt cgttttatcc ccactgccat ttcggtttct tatgccttag gtatgatgca
     6061 atttatgcca tttctagcta atcacatagg ggaaaaagaa ttaaaaattc caaattttga
     6121 tcaagatttt atgtttaaac ctgaaatagc atattatttt gcaaaccatc atctaaatta
     6181 tcttgaatcg cgtttaaaat ctccactttt cgttgcttac gcttacaatg gaggtatagg
     6241 ttttactaat cgcatgcttg caagaaatga tatgtttaaa gcgggcaaat tcgaaccttt
     6301 cttatctatg gaatttgtgc cttatcaaga aagccgaatc tatggaaaaa aagttctagc
     6361 taattatatt gtgtatcgac atcttctgaa cgatagtata aggatttcgg atatttttga
     6421 aaatttaatt caaaacaaga cagatgattt aaacaaatct tagccacaag tctagtctct
     6481 tccttaacac taggaagaga tattttaaaa taatcagtat agttattttg tattatatat
     6541 tttaaatatc cttcatccaa tttttcaata ttagcttttt tattattaat gaaaacttct
     6601 aaattttgaa tttttaatgt atttggggta aaagacaaag ctaaaacatc atctttactt
     6661 gtcttgtcta aaattggatt taaataagac atggctacaa tggcattaat cttatcttgt
     6721 gtaattttat atttttgagt aaacatcaaa gtttgagatt ttaaatttgt atccacaacc
     6781 gcttgatctt ttaaagaaca agccccaagt aaaaaagcac ctaaaattac actataaatt
     6841 ttcattcttt ttccatattt tttgttatta ttgtaacctt ttaaccctat tttttggttt
//
LOCUS       DAPWAA010000080         6842 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.080, whole genome shotgun sequence.
ACCESSION   DAPWAA010000080 DAPWAA010000000
VERSION     DAPWAA010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6842)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6842)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6842
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.080"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(433..1329)
                     /locus_tag="RTF91_001550"
     CDS             complement(433..1329)
                     /locus_tag="RTF91_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HDZ4944413.1"
                     /translation="MIEKEEIGITIENYDECINGSKTFVFKTKGGSIGSGEDCTFRIQ
                     DKLEQIKNTHAIVSYEEGFFTITPFEDSDIYYNKSFSKVPSGYEIIISIGDIFRIGNL
                     EFRFVDAKSIEESIKENKKYLEDIEKRNRFDEIKIQPRGKTSINFDKNEELKEILKNN
                     DYKFIEEEKADDSFLKEITQNPHSLEHENILKSLVKNLKDIKTKQQSSKLDKDYSPIN
                     IKDFESIINNIPLIKSTRLINILALSLITKELYTPIFEEMEENIFIKYLEAAIQNNIK
                     EDKILFENLTIKALEKYIKDFE"
     gene            complement(1326..4853)
                     /gene="tssM"
                     /locus_tag="RTF91_001551"
     CDS             complement(1326..4853)
                     /gene="tssM"
                     /locus_tag="RTF91_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002914594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system membrane subunit TssM"
                     /protein_id="HDZ4944414.1"
                     /translation="MFKKIFDFIKSRLFVTIFLLCCIFLFSILFWFWGPLVAFNDVYI
                     FSSSFLRFSIISIVWLIVFLFFLLKPIVNFISSLKSEKRLKFKDLKKEADEFIYKSKR
                     NFFLSLKDAKETWKNDLKIKNLPLIIIIGNEGAGKSTFINYSDIEYPLSDSLESYKKF
                     HKSTRNFALYVSKKGALLDTEGNYFSQEEFFKPISSDEIPEDDIDKNRDFLIKKNIWK
                     KFLTFLNKNFFHSKLNGIILVVDTVLFLNNPKEYSKNLIRYLTKRVNECEKTLNLKLP
                     IYIVFSKLDLIEGMKEYFDIFDKKISDKILGLSFEQILNEEFLNNEFKELSDSLLCSL
                     MSKNSYIYNLENKNKSYLFLKQLDNLFALVKIFILETQEENKLKNNSYLRGVYFVSAY
                     QENIPRNFLLDAICEKYNCKKILSKSSIIYNKQSYFVKSLLEDLIFTDYSLSIMKSYS
                     KKLSFLIMILIISFGTYTISSYFINKNNNEFEKSQNTLRSLQSLLENQDYQNLNIKQK
                     ADFLIELRNILNTYPELWQDNNILQYLNLNLSYKGFKEAKQLYYKLNEDVLKNTLLKE
                     MEYTLLTDTDKENLIKTLYMYRSLFEQKYFNKEMLKIWINENWNALSKYSISKDDFLG
                     GVDELKQFNLKSFKEDENSINTGKRKLETISKTQRIYTLLNFLNSDKPKEKYLIKEDL
                     GFAANSIFSNNSQITSIDKIYTKVGMIDFLKDLNQQIDTAINIDSWMLNSNFKENKNT
                     LTMGILKLYLNEYQNAWQNLLASLQPVKYNTKDGMLNELDILSKKENPLYSLLKIVSS
                     NTNLNDAVLLTQAYNLGLNAGEIKSNFIGVSNVFIQYHKLVNKNTLLSVGNIEVGKNT
                     DDEKILDVINTNITNVSNKIVDFSSNNGQSAEEKIAYALGNNKDANDPFIAFQMSIKK
                     LPSDLERYYSQLYNHSWNLIENYGISLFNTAWTNEVYNPFINDIAPFYPFNEESTADL
                     SMDSFKTFFGRNGVLNSFYKKYLNNVLVKRKNNYSINSQFASKLNFSKEFLDFITNAD
                     NLSNLILNANDNIKVNFTIQSLDLSADFSSVKLGYNNKNIQYDHTLDQSLQIVAEEFN
                     NGTSLNFTAYNYSNPNLNYTKSYEGEWAWYKFIKDSKNNSTYSIIFNNNKNLYFDFEI
                     ISGANDLNNIVYILNNLKIVENITGVSKQ"
     gene            4986..5501
                     /locus_tag="RTF91_001552"
     CDS             4986..5501
                     /locus_tag="RTF91_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001142947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hcp family type VI secretion system effector"
                     /protein_id="HDZ4944415.1"
                     /translation="MAEPAFIKIEGSTQGLISSGASTEASIGNRYKSGHEDEIMAQEV
                     SHIVTVPVDQQSGQPSGQRVHKPFSFTCSLNKSVPLLYNALTKGERLPTVEVHWFRTA
                     TSGGSEHFFTTKLEDAIITNIELIMPNAQETSNHDKTELLKVSMSYRKVVWEHTAAGT
                     SGSDDWREGKA"
BASE COUNT         2364 a          840 c          865 g         2773 t
ORIGIN      
        1 attctaagac tttcttgatt gtttaaatct aaaaaacgaa gatgtaattt tttcctctaa
       61 agctaatttt aaggcattga gatctttaaa agaagcatta agattttcat catttttaaa
      121 gcataaatga tattttcatg ttcttgtttt tgagtgatag catattgtaa taaaggattt
      181 tttaatgcgt attgctatta attaaaacat tgattaaaaa cattttagct aatagaagta
      241 aagatagaag tgtagaaggg atgtaagaag aatttaggtt taaatttaaa agcgttgttc
      301 cgtctaatct tatgttttta aattctctaa ggcttttctt ttttctgaat caatttgaag
      361 tgttttttgc atcgttttcc ctttcttttg tttaatatta tgctaaaaaa cataatatta
      421 aaggatgaaa aatcactcaa aatctttaat atatttttcc aatgctttta tagtaagatt
      481 ctcaaaaaga atcttatctt ctttgatatt attttgtatt gcagcttcaa gatacttaat
      541 aaatatattt tcttccattt cttcaaagat aggagtatat aattcttttg tgattaaact
      601 gagcgctaaa atattgatca atcttgtaga tttgattaga ggtatattgt taataatact
      661 ttcaaaatct ttgatattaa taggagaata atctttgtct aatttagagc tttgttgttt
      721 tgttttgatg tcttttaaat tttttaccaa gctttttaaa atattttcat gctctaatga
      781 atggggattt tgagttattt cttttaggaa gctatcatct gccttttctt cttcaataaa
      841 tttgtaatca ttatttttta aaatctcttt caattcttca tttttgtcaa aatttatact
      901 tgtctttcct ctaggttgaa ttttaatttc atcaaaacga ttgcgttttt caatatcttc
      961 taagtatttt ttgttctctt tgatactttc ttcaatactt tttgcatcta caaatctaaa
     1021 ttccaaatta ccgattctaa aaatatcgcc tatactaatt attatttcat aaccacttgg
     1081 cactttagaa aaggacttgt tataataaat gtcagaatct tcaaaaggtg taattgtaaa
     1141 aaatccttct tcataagata ctatagcatg tgtatttttg atttgttcta gtttatcttg
     1201 aatgcgaaaa gtgcaatctt caccgcttcc tatacttcca ccctttgttt taaatacaaa
     1261 tgttttagag ccattaatac attcatcata attttcaatg gtaattccta tttcttcttt
     1321 ttctatcatt gtttacttac ccctgtgata ttttctacta ttttaagatt atttaaaata
     1381 taaactatat tatttaaatc attagcacca ctaataattt caaagtcaaa atataagttt
     1441 ttattattgt taaatataat gctgtatgta gaattgtttt tgctgtcttt tataaactta
     1501 taccatgccc attctccttc atatgatttt gtataattta aattaggatt ggagtagtta
     1561 taggctgtga aatttaagct tgttccattg ttaaattctt ctgctacaat ttgcaaggat
     1621 tgatcaagag tatggtcata ttggatattt ttattattat aaccaagctt tacagaggaa
     1681 aaatctgcac ttaaatcgag gctttggatg gtaaaattaa cttttatgtt gtcattggca
     1741 ttcagtatga gatttgaaag attatctgca ttggtgataa aatctaaaaa ttctttagag
     1801 aaatttaatt ttgaagcaaa ttgagagtta atagagtagt tattttttct ttttactaaa
     1861 acattgttca agtatttttt ataaaaacta tttaatactc catttctacc aaaaaatgtt
     1921 ttaaaactat ccatgctaag atcagctgtg ctttcttcat taaaaggata gaatggtgca
     1981 atatcattga taaatggatt gtatacttca ttggtccaag cagtattaaa taaagaaatg
     2041 ccataatttt cgattaaatt ccaagaatga ttataaagct gactataata cctttctaaa
     2101 tcactaggta atttttttat actcatttga aatgcaataa aaggatcatt ggcgtcttta
     2161 ttgtttccaa gagcatatgc aattttttct tcagcacttt ggccattgtt ggaactaaaa
     2221 tctacaatct tattggacac atttgtaata tttgtattaa taacgtctaa tattttttca
     2281 tcgtcagtgt ttttaccaac ttctatatta ccaacgctta aaagtgtatt tttatttaca
     2341 agtttatggt attgaatgaa aacattgctt accccaataa agtttgattt aatttctcca
     2401 gcgtttaatc ctaaattgta ggcttgagtc agtaaaactg catcatttag atttgtattg
     2461 gagctaacaa ttttcaataa agaatataag ggattttctt tttttgataa aatatcaagc
     2521 tcattaagca ttccatcttt agtattatac ttaacgggct gcaatgaagc aagtagattt
     2581 tgccaagcgt tttgatattc atttaagtat aattttaaaa tacccatagt taaagtattt
     2641 ttattttctt taaaattgct atttagcatc caagaatcaa tattgattgc agtatcaatt
     2701 tgttgattta agtcttttaa aaagtctatc atgccaactt ttgtatatat tttatctata
     2761 gaggttattt gagaattgtt cgaaaatata ctatttgcag caaagcctaa atcctctttt
     2821 atgagatatt tttctttggg tttgtcgcta tttaaaaaat taagaagagt gtaaattctt
     2881 tgagttttgc ttatagtttc aagctttctt tttcctgtat ttatactgtt ttcatcttct
     2941 ttaaaagatt taagattaaa ttgtttaagc tcatctactc ctcctaaaaa gtcgtcttta
     3001 gagattgaat acttacttaa agcattccag ttttcattaa tccagatttt tagcatttct
     3061 ttattaaaat atttttgctc aaacaaagat ctatacatat ataaagtttt gattaaattt
     3121 tctttatctg tgtcagtaag taaagtatac tccatttctt ttaataaagt gttttttaac
     3181 acatcttcat taagtttata ataaagttgt ttggcttctt taaatccttt atatgaaaga
     3241 ttgagattta aatattgaag tatattatta tcttgccaaa gttcaggata agtgtttaaa
     3301 atatttctca attcaattaa aaagtcagct ttttgtttaa tgtttaaatt ttgataatct
     3361 tgattttcga gaagtgattg taaagatctt aaggtgtttt ggcttttttc aaattcgtta
     3421 ttgtttttgt ttataaaata agaagatata gtatatgttc caaagcttat gattaaaatc
     3481 ataattaaaa aagatagttt tttagaataa gatttcataa tacttaaaga ataatctgta
     3541 aaaattaaat cttcaagcag tgatttaaca aaatagcttt gtttattata tataatacta
     3601 gattttgata atattttttt gcagttatat ttctcacata tggcatcaag caggaaattt
     3661 ctaggaatat tttcttgata ggcgctgaca aagtaaactc ctctaagata agaattattt
     3721 ttgagtttat tttcctcttg tgtttctaaa ataaatatct ttaccaatgc aaataaatta
     3781 tcaagctgtt ttaaaaataa gtagctttta tttttgtttt ctaaattata aatataggaa
     3841 tttttactca tcaaagagca taataatgaa tcacttaatt ctttaaattc attatttaaa
     3901 aattcttcat ttaagatttg ctcaaaagat aatcctaaaa ttttatctga aattttttta
     3961 tcgaaaatat caaaatattc tttcatgcct tcgatcaaat caagttttga aaagactata
     4021 tagataggca atttcaaatt caaagttttt tcacattcat ttactctttt tgttaaatat
     4081 ctaataagat ttttggaata ctctttagga ttatttaaga aaaggacagt atcaacaacc
     4141 aaaataattc catttagttt gctatgaaaa aaatttttat tgagaaaagt aaggaatttt
     4201 ttccatatat tttttttaat taaaaaatct ctatttttat ctatatcatc ttcaggtatt
     4261 tcatcactac ttataggttt aaaaaattct tcttgtgaaa aatagtttcc ttctgtatct
     4321 aataaagcac ctttttttga tacatagagt gcaaaatttc tagtagattt atggaatttt
     4381 ttataagatt ctaagctatc actaagtgga tattcgatgt cagaataatt aataaaagtg
     4441 ctttttccag ctccttcatt tccaatgatg ataattaaag gtaaattttt tatttttaag
     4501 tcatttttcc aagtttcttt agcatcttta agagataaaa agaagtttct tttagattta
     4561 taaataaact catcagcttc tttttttaga tctttaaatt ttaatctttt ttcgcttttt
     4621 aaagaagata taaaatttac aataggcttt aataaaaaaa ataaaaagac aataagccaa
     4681 actatagaga taatgctaaa tcttaaaaat gagctactaa aaatatatac gtcattaaaa
     4741 gccactaaag gaccccaaaa ccaaaataaa atgctaaaga gaaagataca acaaagcaga
     4801 aaaatagtta caaataatct tgattttata aaatcaaata tttttttaaa cattcattat
     4861 tccttaaaaa gtaaaaacaa ataaatatta gtattaatat gtaaatattt ttaaaaaaat
     4921 taaatagatt aacattaaaa tgatacaatt ttgaatgtta aaaaaaatta aaggaggttc
     4981 tttttatggc tgaaccagcg tttataaaaa ttgaaggttc tacacaaggt ttgatttcaa
     5041 gcggtgcatc taccgaagct agcattggta atagatataa gtcaggtcat gaagatgaaa
     5101 tcatggctca agaggtatct catattgtaa ccgtacctgt agatcagcag agtgggcagc
     5161 cttccggaca aagagttcat aagccttttt cttttacttg ctcattaaat aaatctgtac
     5221 ctttgttgta taatgcactt actaaaggag aaagacttcc aacagttgaa gttcattggt
     5281 ttagaactgc aacaagtggt ggatctgaac atttttttac tacaaaattg gaagatgcaa
     5341 ttattacaaa tattgaatta ataatgccaa atgcacaaga gacaagcaat catgataaaa
     5401 cagagctttt aaaagtttca atgagctata gaaaagtagt ttgggagcat actgctgctg
     5461 gaactagcgg aagtgatgat tggagagaag gtaaagctta attataaagc tgtaaagaaa
     5521 aattttatct taaaaaaatc ccgactaata tacgtgatta tagttgggat tgcatcttga
     5581 aaatctattt tttacttttc ttagttttaa ttataaaatt tactttctaa attataaagc
     5641 tattatttat aaaataattt atcttaacga ataaattttt attttttcca tacttaaata
     5701 ttgctatatt tatctttttt aagtttaggt ataaattaat attaagattt tgcaatcgat
     5761 ttatttttat attttaaaaa gctcatcctt tccagcgcat gtttttattt agttttaaac
     5821 tttctatgca taagtagctt taaattcatg aagcaaggtt gaaatcgttg ttctaaaatc
     5881 gtaaaaaacc atttcttcgc taaaacttaa tcgtttaatg cctctgttta aagtgttttc
     5941 gctcatggtt tatatcactt gaaaaaatat ttgaatggta aaatcaaaag gtttggtaaa
     6001 ttcaaacaac cttataatac tttgacttaa tgatatgata aaatcttctt tattttattt
     6061 gcaggtatag ttatttttaa gtttttgaaa tttatttcat tctaaatttc aaatattagc
     6121 acttcttaaa aataaatatg gactgataaa tccaataata actctaaggt tttgttttag
     6181 cagaactata aagagtttgt actatattgt atgcattctt tatttattac atgtaacata
     6241 tttttattgt ctcattttta ccttccgttt ttaatttatc atatattgat cttttttaac
     6301 gtctttgtca cctattttta atgatatgta tctaaaatag aaaattttat ctatttttct
     6361 ttgttattag attcaactaa ttttttattg actacattga taatattcat cttatccttg
     6421 taaagtatat gcaaatttta aaaaatattt tttacacata cttttgaatt tgttaaaaga
     6481 tactaaatgg tattaattat atctttttaa agttctgatt tattagattt tatttgttaa
     6541 ttaagatgaa ttgagataag aagtagcgat gtgatcccgc gccaacttaa tcgccaaaaa
     6601 gcttgattgc attagtacaa attattaaga tttttttaca aagatacatt gattaaacgt
     6661 tcaactcctg aaatagactt taatttttag caaattttag tttttctcaa gaatggatga
     6721 taatcgttat aaaaattggg atatatttgg tggtgtgata aggataatat atttttagaa
     6781 cttatagttt aaaagaagat gaaacaaatt ctaaaatcga taaaaattta ttgattttag
     6841 ga
//
LOCUS       DAPWAA010000081         6511 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.081, whole genome shotgun sequence.
ACCESSION   DAPWAA010000081 DAPWAA010000000
VERSION     DAPWAA010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6511
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.081"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..560
                     /locus_tag="RTF91_001553"
     CDS             <1..560
                     /locus_tag="RTF91_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDZ4944416.1"
                     /translation="IYKNALIYAYILNANNPNPQIIRYLVRRGAKFEVYNEDTSWTPM
                     HFWALTNEYELLELAIQGGANVDMQVFSDREYDNTLLFEAVSEPETYRVTKLLIELGA
                     NVNHAIPVTPLDDARGSRNKKLLKDAGAMTSEQIRKKYNLPAYDSSHCEIDGETDFDL
                     LGKYHDEYSKLLNDAIKKAKENGEI"
     gene            569..1636
                     /locus_tag="RTF91_001554"
     CDS             569..1636
                     /locus_tag="RTF91_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDZ4944417.1"
                     /translation="MLNKITIKGYKSIRDLSEFELKNLNILIGANGAGKSNFISVFKM
                     LNVLLNKNLQFYTQDKGPDSFLYFGRKKTEKLHFDFDFSPNRYKVDIVPTQENKLLIQ
                     KERIYFEGYEYPIGENIYESNISNAEEYSRSKAVASYTINEIKKWKLYHFHDTGDTAK
                     MKGICDVNDNLIFKEDAQNIAAYLRKLHDDYKQHYEQILATIQDIAPFFGGFIFRDNE
                     NIQLEWYHKNDPDTPFKAHILSDGTLRFICLATLLLQPFELMSGTIIIDEPELGLHPY
                     ALKVLSEIIKRVAQKKQLIISSQSIELINHFKAQDIIVVDKEDDQSIFTRMDNEKLQT
                     WLEEYTLGEIWASNLIGGRPK"
     gene            1636..2337
                     /locus_tag="RTF91_001555"
     CDS             1636..2337
                     /locus_tag="RTF91_001555"
                     /inference="COORDINATES: protein motif:HMM:NF025468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4276 family protein"
                     /protein_id="HDZ4944418.1"
                     /translation="MSSILRCYVICEGQSEEKFINETLGSYFYNANIYLIPLTIPTSK
                     GHKGGALSYDRVVDFIIKKLKQDPEAFMTTMFDFYGLDDKFLKENTMNADIYECIEKI
                     QKNFDEAIRQKCDTNQFFSYIQPHEFESLLFSDITKILKADAEWDERLICELEDIIKK
                     YDNPELINNSKETSPSHRLKKIFSCPSYKKVLHGSKIAKEIGIDNIRSKCQHFNQWCK
                     KIHNLKTYQNTKEKQ"
     gene            2361..2792
                     /locus_tag="RTF91_001556"
     CDS             2361..2792
                     /locus_tag="RTF91_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944419.1"
                     /translation="MQEVFKYYLKNDNYLEGALDGLKKHERRVFISNVLSYEYENLVE
                     NGNLKLDEKDRAILAPNFIAILKYDKNNFDGIILKEFINDLEFELEHIEMELYDDPAD
                     FEGGDYYSEDSDCDEDYTIEDWVEDQVKDIKDFIDALRAFK"
     gene            2789..4033
                     /locus_tag="RTF91_001557"
     CDS             2789..4033
                     /locus_tag="RTF91_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944420.1"
                     /translation="MILSANRVSFYLFSTKTFSDEKYLNAWSLKGERLNAKDWFELKQ
                     ANKDKFYNKHLNNTLKAMQELKAYFSIDKFEGINFSGDDEWWDFLPSNYNPFYNRLCQ
                     DKSKYILHRYYQKNDLVEIGMLKNLSPNFPFWDEKGENFSQSQIDTFIEKDNLAPYFN
                     QYDVYFNSSLDLSFNFCDKSLEYLVNNYNHRINHAFTPKSQDEIQKELNLNKEDKIIL
                     ELENIFLNLCKGISADYAFINFSYFFVGYDYTLDSKNNTLRSYPANEDKLIYKRSFKE
                     YIEDYANNYFLNYYSKEFLNELDNQELNKNRLNYHLVNYDKIPKNTEEENIQGILSKQ
                     KDININFVNFIDYKDYVYSNKDDFWNFSPKENSILWEKFLSKNTLKPFPINFDCSLEE
                     KLLYAKDEQLESILQTHKAFYG"
     gene            4026..4973
                     /locus_tag="RTF91_001558"
     CDS             4026..4973
                     /locus_tag="RTF91_001558"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944421.1"
                     /translation="MGKKRKITIPRIDGMNATPDTSCMHPILEDDTLVCLHGGRVKLK
                     TKKAKRIKSDNVPIMLHNEIQGASISGCLNPPILGGPCTKVALVFPYTYSNHKVNNKH
                     PVHQMGLIGVSIKGYPIFAIPKKNKIKFSLAKIQASPLAKIKYDKIRWQGIGDKKNKS
                     NRTKQIQRLKNNRQKGNYAEMQMDEYYKAKGYERISFNEVKGLDDKIHHGIDGIYYNP
                     NKNPKYIIAEAKFGKSKLNKKTGQMSDKWLTDNKLKRLKDNVGEKHAKEIDKLLNSNE
                     VRKDLFHIDKGGNVSIKELDKDAKTVNIIERIKNGKRYK"
     gene            4954..5604
                     /locus_tag="RTF91_001559"
     CDS             4954..5604
                     /locus_tag="RTF91_001559"
                     /inference="COORDINATES: protein motif:HMM:NF020501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1910 domain-containing protein"
                     /protein_id="HDZ4944422.1"
                     /translation="MVRDTSNDEAYFTKLIIENEAEIEERKRWLLELPLGDPRRENYL
                     FSIEDRKFHNAMDKYARGDDINLVKKDLEVLMLEKQKNRLEVGIDIGYFKGNAIELCI
                     RVLLDMDTTCLLELIEEDERNRKDILNRDWFLHFIGSKGKNLNLERKCIAKEHELIKE
                     FVATKDIEFLHKYMKKHARLRNPINTWDLEGAAIVKIMNLNKEEFKNYKYFPYDLI"
     gene            5960..>6511
                     /locus_tag="RTF91_001560"
     CDS             5960..>6511
                     /locus_tag="RTF91_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="HDZ4944423.1"
                     /translation="MKEIVDLENKRVTRLYSKVEEKVNNTTGEITTIVSSFLQKEKTK
                     DDFIKLFVENINYLTDNLSNSALRVMLMMFRNLNYQNIFHYNSDFVSYFTSKKILGKS
                     SVYRAIKELEDKNVIFKITKEQQEEYDIISPNSYIINPQIIGKGSFKDLKKLKQTTIK
                     EFDFEKLEMTQKVKVESEYEGLDK"
BASE COUNT         2670 a          763 c         1042 g         2036 t
ORIGIN      
        1 gcatttacaa aaatgcttta atctatgctt atatactcaa tgctaacaat cccaaccctc
       61 aaatcatcag gtatttagta agacgtggag ccaaatttga agtgtataat gaagatacaa
      121 gttggactcc tatgcatttt tgggctttaa caaatgagta tgaattatta gaattagcca
      181 ttcaaggagg agctaatgtg gatatgcaag tttttagtga tagagaatac gataatactc
      241 ttttatttga agcagtgagt gaaccagaaa cttatagggt tacaaaactt ttaatagaac
      301 ttggagccaa tgtaaatcat gctattccag taaccccttt agatgatgca cgaggatcta
      361 gaaataaaaa acttttaaaa gatgcagggg cgatgacttc agaacaaatc agaaaaaaat
      421 ataatttacc agcatatgat tcttctcatt gcgaaattga tggagaaact gattttgact
      481 tattaggcaa atatcatgat gaatactcca agcttttaaa cgatgctata aaaaaggcta
      541 aagaaaatgg agaaatttaa ggatataaat gttaaataaa ataacaatca aaggatataa
      601 atctatacga gatttatctg aatttgagct taaaaattta aatatcttaa taggtgcaaa
      661 tggtgcgggt aaaagtaatt ttatctcagt atttaaaatg cttaatgttt tactcaataa
      721 aaatttgcaa ttttatacac aagataaagg acctgatagt tttttgtatt ttggtagaaa
      781 aaaaactgaa aaattgcatt ttgattttga tttttctcca aatagatata aagtagatat
      841 tgtacctaca caagaaaata aactccttat acaaaaagaa agaatttatt ttgaaggcta
      901 tgaatatcct ataggagaaa atatatatga aagcaatatt tccaatgcag aagaatactc
      961 tagatctaaa gcagttgcaa gttatactat aaatgaaatt aaaaaatgga agctttatca
     1021 ttttcatgat actggagata cagctaagat gaaaggcata tgtgatgtaa atgataatct
     1081 tatatttaaa gaagacgcac aaaatatagc agcttatctt agaaagctcc atgatgatta
     1141 taagcaacat tacgaacaaa ttttagctac catacaagac attgctcctt tttttggggg
     1201 atttattttt agagacaatg aaaatataca attagaatgg tatcacaaaa acgatcctga
     1261 cacccctttt aaagcccata tactttctga tgggacttta agatttatat gcttggctac
     1321 tttattactt cagccttttg aattgatgtc aggaacgatc atcatcgatg aacctgaatt
     1381 aggactgcat ccttacgcgt taaaagtttt aagcgaaatc atcaaaagag tagctcaaaa
     1441 aaaacaactc atcatttctt ctcaatctat agaactgata aatcatttta aagcacaaga
     1501 tatcatagtc gtagataaag aagatgatca gtctattttt acaagaatgg acaatgaaaa
     1561 actacaaact tggcttgaag aatacacact tggagaaatt tgggctagta atctcatcgg
     1621 tgggagacca aaataatgtc aagtattcta agatgctatg taatttgtga aggacaaagt
     1681 gaagaaaaat ttatcaatga aactttagga tcgtattttt ataatgccaa tatttatctc
     1741 attccactaa caatacctac atctaaagga cataagggtg gtgcgctttc atatgataga
     1801 gttgttgatt ttatcattaa aaaattaaaa caagatcccg aagcttttat gacaactatg
     1861 tttgattttt atggattgga tgataaattt ttaaaagaaa atacaatgaa tgccgatata
     1921 tatgaatgta ttgaaaaaat acaaaaaaat tttgatgaag caattagaca aaaatgcgat
     1981 acaaatcaat tttttagcta tatacaaccg catgaatttg aaagtttact ttttagcgat
     2041 attacaaaaa tccttaaagc ggacgctgaa tgggatgaaa gactcatttg cgaattagaa
     2101 gatattatca aaaaatatga taatccggaa ttgattaaca atagcaaaga aacaagccct
     2161 tcgcatagac taaaaaagat tttttcttgt cctagttata agaaagtttt gcatggtagt
     2221 aagattgcta aagaaatcgg tatagataat ataagatcaa aatgtcagca ttttaatcaa
     2281 tggtgtaaaa aaattcacaa tttaaaaact tatcaaaaca caaaggagaa acaatgaata
     2341 aaattttatt ctataaaaaa ctgcaagagg tttttaaata ctatcttaaa aatgataatt
     2401 atttagaagg tgccttagat ggtttaaaaa aacacgaacg aagagttttt ataagtaacg
     2461 ttttaagcta tgagtatgaa aacttggtag aaaatggaaa tttaaaactt gatgaaaaag
     2521 atagagctat cttagctcct aatttcatag ccattttaaa atatgataaa aacaattttg
     2581 atggaataat tcttaaagaa tttataaacg atttagaatt tgaattagaa cacatagaga
     2641 tggaacttta cgatgatcct gctgattttg aagggggaga ttattatagt gaagacagtg
     2701 attgtgatga ggattataca atagaagatt gggtggagga tcaagtaaaa gatataaaag
     2761 attttataga tgctttgaga gcctttaaat gatactaagt gctaatcgag taagctttta
     2821 tcttttttct actaagactt ttagcgatga aaaatatctt aatgcttgga gcttaaaagg
     2881 cgagcgttta aatgccaaag attggtttga acttaaacaa gccaataaag ataaatttta
     2941 caataaacat ttaaataata ctttaaaagc tatgcaagaa cttaaagctt attttagtat
     3001 tgataaattt gaaggtatta atttcagtgg tgatgatgag tggtgggact ttttaccttc
     3061 aaattataat ccattttata atagattatg ccaagataaa agtaagtata ttttgcatag
     3121 atattatcaa aaaaatgact tagtagaaat tggtatgctt aaaaaccttt ctcctaattt
     3181 tcctttttgg gatgaaaaag gagaaaattt ctctcaaagt cagattgata cttttataga
     3241 aaaagataat ctagcaccct attttaacca atatgatgtt tattttaatt cttcgcttga
     3301 tctaagcttt aacttctgtg ataaaagctt agagtatttg gttaataatt ataatcatag
     3361 aataaatcat gcttttactc caaaaagtca agatgaaata caaaaagaat taaatttaaa
     3421 caaagaagac aagatcattt tagaacttga aaatatattt ttaaatcttt gcaagggtat
     3481 aagtgctgat tatgctttta taaatttttc ttattttttt gtaggatatg attatacttt
     3541 agattctaaa aataatactt taagatctta tcctgctaat gaagataaat taatttataa
     3601 aagaagtttt aaagagtata tagaagatta tgcaaataat tattttttaa attattattc
     3661 taaagagttt ttaaatgagc ttgataatca agaattaaat aaaaacaggc ttaattatca
     3721 ccttgttaat tacgataaaa ttccaaaaaa cacagaagaa gaaaatatac aaggcatact
     3781 ttctaagcaa aaagatataa atatcaactt tgtaaatttt atagattata aagactatgt
     3841 ttatagcaat aaagatgatt tttggaattt ttcaccaaaa gaaaattcca tactttggga
     3901 aaaatttcta agtaaaaaca ccctaaaacc ttttcctata aactttgatt gctctttaga
     3961 agaaaagctt ctttatgcta aagatgaaca actagaaagc atacttcaaa ctcacaaggc
     4021 tttttatggg taaaaaaaga aaaataacta ttcctagaat agatggtatg aatgcaactc
     4081 ctgatacttc ttgtatgcat cctatattag aagacgatac tttagtatgc ttacatggag
     4141 gtagagttaa attaaaaaca aaaaaagcta aaagaataaa atcagataat gttcctatta
     4201 tgttacacaa cgaaatacaa ggagctagta tcagtggatg tttaaatcca cctatactag
     4261 gaggaccttg cactaaagta gctttagtat ttccttatac ttattcaaat cataaggtta
     4321 ataataaaca ccctgttcat caaatgggtt taataggagt aagtataaaa ggttatccta
     4381 tatttgctat acctaaaaag aataagatta aattttcttt agctaaaata caagctagtc
     4441 ctcttgctaa aattaaatat gataagataa gatggcaagg gataggagat aagaaaaata
     4501 aaagcaatag aacaaagcaa atacaaagat tgaaaaataa tcggcaaaaa ggtaattatg
     4561 ctgaaatgca aatggatgaa tattacaaag ccaaaggtta tgaaaggatt agtttcaatg
     4621 aagttaaagg acttgatgat aaaattcatc atggaattga tggaatttat tataatccaa
     4681 ataagaatcc aaaatacatc attgcagaag ctaagtttgg aaaaagcaaa ttaaataaaa
     4741 aaactggaca aatgagtgat aaatggctaa cagacaataa attaaaacga ctcaaagata
     4801 acgtgggaga aaagcatgct aaagaaatag acaaacttct taatagcaat gaagtcagaa
     4861 aagatttatt tcatattgat aaagggggta atgtgagcat taaagaatta gataaagacg
     4921 caaaaactgt aaacataata gaaaggataa aaaatggtaa gagatacaag taatgatgaa
     4981 gcatatttta ctaagcttat aatagaaaat gaagcagaaa ttgaagagcg taaaagatgg
     5041 ctactagaac ttcctttagg agatccaaga agagaaaatt atcttttttc tatagaagat
     5101 agaaaatttc ataatgctat ggacaaatat gctcgtggtg atgatataaa cctagtgaaa
     5161 aaagatttag aagtactcat gctagaaaaa caaaaaaatc gtttagaagt gggaattgat
     5221 attggttatt ttaagggaaa tgctattgag ctttgtatta gagtattatt agatatggat
     5281 actacttgtt tattggaatt gatagaagaa gatgagagaa atagaaaaga tattctcaat
     5341 agagattggt ttttacattt tataggttct aagggtaaaa atttaaattt agaacgtaaa
     5401 tgtattgcca aagaacatga gcttattaaa gaatttgtgg ctactaaaga tattgagttt
     5461 ttacataagt atatgaaaaa acatgcaaga ttaagaaatc ctataaatac ttgggatctt
     5521 gaaggagctg ccattgtaaa gataatgaat ttaaataaag aagaatttaa gaattataaa
     5581 tactttcctt atgatttgat ttagttttta gtgggtttaa gtcttcaaac ccacaaggct
     5641 ttttatgata caaatgggtt aaatttgctt tataaagcta ggtcctcttg ctaaaattag
     5701 gcatgataag atggcaagaa taggagataa gaaaaaaaac atagagccaa gcgaatatct
     5761 atattaaata aaccttacca aacaatacca acaaagattg caactcccac cagtaggata
     5821 aaaactgctt gtggtgggaa aattatttta agaaaatttt actttcccaa caaattggga
     5881 aaaattaact tttttatttt aaattgtatt attttttccc aaaaaatgat acaatacttg
     5941 aataagaaaa ggatagagca tgaaagaaat agtagatttg gaaaataaac gagtaactag
     6001 attgtatagt aaagtagagg aaaaagttaa taacactaca ggagaaatta ctactatcgt
     6061 aagctctttt ctccaaaaag aaaaaactaa agatgatttt atcaaacttt ttgtagaaaa
     6121 tatcaattat cttactgata atctttccaa ttctgcctta agagtaatgt taatgatgtt
     6181 tagaaattta aattatcaaa atatttttca ttataatagt gattttgtat cttattttac
     6241 aagtaaaaaa atcttaggaa aatctagtgt ttatcgtgca attaaagaac ttgaggataa
     6301 aaatgtaatc tttaaaatta caaaagagca acaagaagaa tatgatatta taagtccaaa
     6361 ttcgtatatc ataaatccgc aaattatcgg aaaaggttct tttaaagatt tgaagaaatt
     6421 aaaacaaaca acaataaaag aatttgattt tgaaaaatta gaaatgacac aaaaagtcaa
     6481 agtagaaagc gaatatgaag gtttagataa a
//
LOCUS       DAPWAA010000082         6410 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.082, whole genome shotgun sequence.
ACCESSION   DAPWAA010000082 DAPWAA010000000
VERSION     DAPWAA010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6410
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.082"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            85..369
                     /gene="gatC"
                     /locus_tag="RTF91_001561"
     CDS             85..369
                     /gene="gatC"
                     /locus_tag="RTF91_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HDZ4944424.1"
                     /translation="MQIDEKLLSKLEKLSALQITENRNETIAQLSEIVNFVEKLNELD
                     LDSEEITVNTIKGGAPLRVDEIKNSDVIDQVLDCAPKKQEHFFVVPKIIE"
     gene            433..996
                     /locus_tag="RTF91_001562"
     CDS             433..996
                     /locus_tag="RTF91_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDZ4944425.1"
                     /translation="MNFYWFDAFILGFTLLLGLKGIINGLIKEIFGLLGIIGGVFIAS
                     KYATQAAEFIQSTFYKIENQSLAGFAGFLAILVIFWIVCLLVGSFLSKLIKLSGLGFL
                     DRIGGFIFGGAKIFLIFAILVFCIARIGFLNDKLDNFAKNSYTLNLLKETGSFIMNQP
                     LAENSLDHASEKLQDIVSDLNNTQKGE"
     gene            998..1471
                     /locus_tag="RTF91_001563"
     CDS             998..1471
                     /locus_tag="RTF91_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDZ4944426.1"
                     /translation="MLIENVEYDVLLERFRKILRQGGLKYTKQREVLLKTLYHSDTHY
                     TPESLYIEIKQAEPDLNVGIATVYRTLNLLEEAEMVTSISFGSAGKKYELANKPHHDH
                     MICKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCGDCNNQKAKVKI"
     gene            1472..2977
                     /gene="lysS"
                     /locus_tag="RTF91_001564"
     CDS             1472..2977
                     /gene="lysS"
                     /locus_tag="RTF91_001564"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDZ4944427.1"
                     /translation="MFDNTLEQQRIEKVKELKNLRINPYPHFLKKEMSLKTFKDKFSY
                     ILEQVEKRDEGVNAVVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSIGEELYAIL
                     KKNLEVGDIVLVKGFPFVTKTGEFSLHASEVKLATKAIIPLPEKYHGLIDIEQRYRKR
                     YVDMIMNAEVRKDFLVRSKVVSLIRHFFEDKGFLEVETPMMHPIAGGANAKPFVTFHN
                     SLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHN
                     YKDLMDLTEELFALLLDKLNLGKAIEFDGKMIDFSKPFERITYKDALCKYGGLDKDLI
                     EDKEKVLAKLKADGFKANEKLELGHLQAELFDNYVEKKLINPTFVIDFPISISPLSRR
                     SDEDSQIAERFELFICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDF
                     INALGYGMPPTAGEGIGIDRLVMLLTNKKSIRDVILFPAMRPLKSELKEKE"
     gene            2974..4218
                     /locus_tag="RTF91_001565"
     CDS             2974..4218
                     /locus_tag="RTF91_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDZ4944428.1"
                     /translation="MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGS
                     ILTNKYAEGYPGKRYYGGCEFVDKIEILAIERCKKLFDCKFANVQPNSGSQANQGVYA
                     ALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESSFYGVELDGRIDYEKVREITKKE
                     KPKLIVCGASAYARVIDFVKFREIADEVGAYLFADIAHIAGLVVAGEHPSPFPYAHVV
                     SSTTHKTLRGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDE
                     WKVYAKQVRTNAQVLAKVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAG
                     ITANKNTVPGETRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDINNEKLQ
                     ENIKQELKKLASNFIIYERAMF"
     gene            4215..4760
                     /locus_tag="RTF91_001566"
     CDS             4215..4760
                     /locus_tag="RTF91_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1882 domain-containing protein"
                     /protein_id="HDZ4944429.1"
                     /translation="MILPMDMSLIKIISDHYYIRRDKIVNKITHRGRLFFDKFERVDA
                     PLNLNIMKEHAAKKIVVAHDLITKDNKVENIVFDYNGFNAERFYHRAQLILREEGFIN
                     FTAYRTKTPGHLHLYIHKGHTALNEGYSLASKLSMMFASKMPVEWKVFPSMDIPREFN
                     ILILPYEVYQKERGSSWSKHM"
     gene            4774..5571
                     /locus_tag="RTF91_001567"
     CDS             4774..5571
                     /locus_tag="RTF91_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HDZ4944430.1"
                     /translation="MENQKNEFDDIILEKSNKSEKVKKILLRVMALVILFLAIMIVMK
                     LINGSGDENTQNQSLLPSEPVTIQENNNDTSFESMPITDNTSAEDQFEALRKQFQDEQ
                     NTTQNTTTFSSNNNDSASFTMPDQEAPAEPNTVTSENTTPQASTSRQEAKQTIVKKET
                     TKQTPKREQNANELFKNVDAKPMHPSGLASGIYVQIFSVSNLDQKSKELASVKQKGYD
                     YKLYKTTVSGKEITKVLIGPFEKANIAAELAKIRKDIAKDAFSFTLK"
     gene            5568..6356
                     /locus_tag="RTF91_001568"
     CDS             5568..6356
                     /locus_tag="RTF91_001568"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDZ4944431.1"
                     /translation="MKFLAVVGDPISHSKSPRMHNNAIKALRLDGIYTRYHLQNANYL
                     REDFFKLGLSGANITLPFKEKALDIADVKDDFASNIGSANTLCLKEDKIYAYNTDALG
                     FLEAIKDFDDIKKALILGAGGTALALAYALKEKGVKVYVANRSKERFKEFLAYSTYLY
                     KDLQDFDFDLVVNSTSAGLKDENLPCDRELLDKILPRSKFAFEVIYGRETPFYRLCKG
                     YNLKIKDGLDMLLWQGVFAFELFFDMQNKREIIKNAMQQALVLK"
BASE COUNT         2330 a          765 c         1207 g         2108 t
ORIGIN      
        1 aaattacaaa aatatcctaa acaatttaaa actttttatg atataatttt caaaatttta
       61 actttttttc taaggtttta agaaatgcaa atagatgaga aattattaag caagcttgaa
      121 aaattaagtg ctttgcaaat aacagaaaac agaaatgaaa ccattgcaca gttaagcgaa
      181 attgttaatt ttgttgaaaa attaaatgag cttgatttag actctgaaga gattactgta
      241 aatactataa aaggtggagc tcctttaaga gttgatgaga taaaaaatag cgatgttatt
      301 gatcaggttt tagattgtgc tccaaaaaaa caagaacatt tttttgttgt tcctaaaatc
      361 atagaatgat taacttggca tttagtgctt atttgtagaa taatttaaaa caaaaatcag
      421 aaagtgattg aaatgaattt ttattggttt gatgctttta ttttaggatt taccttgctc
      481 ttggggctta agggtattat taatggcttg ataaaagaaa tttttggact tttgggtatt
      541 attggtggtg tttttattgc ttcaaaatac gcgactcagg cagctgaatt catacaaagt
      601 actttttaca aaatagaaaa tcaaagttta gctggatttg ctggattttt agccatatta
      661 gttatttttt ggatagtttg tttgttggtc ggtagttttc tttctaaatt gattaagtta
      721 agtggtttag gttttttaga tcgtatcggt ggttttatat ttggcggagc aaaaattttt
      781 ttaatttttg caattttagt tttttgcata gcaagaattg gcttcttgaa tgataaatta
      841 gataattttg ctaaaaatag ctatacttta aatttactta aagaaactgg atcttttatt
      901 atgaatcagc ctttagcaga aaatagccta gatcatgcta gtgagaagtt gcaagatatt
      961 gtaagcgact tgaacaatac tcaaaaaggg gaatgatatg ctgatagaaa atgtggaata
     1021 cgatgttttg cttgagagat ttagaaaaat attaagacaa ggtggactta aatatactaa
     1081 acaaagagaa gtgcttttaa aaactcttta tcacagtgat actcattaca cacccgaaag
     1141 cttatatata gaaatcaaac aagctgagcc tgatttaaat gtaggaattg caactgtcta
     1201 tcgtacttta aatttgcttg aagaagcaga aatggtaact tctatttctt ttggttcagc
     1261 aggtaaaaaa tatgagcttg caaataaacc ccatcatgat catatgatat gtaaaaattg
     1321 cggaaaaatt atagaatttg aaaaccctat tatagagaga caacaagcct tgattgcaaa
     1381 agaacatggt tttaaactta cagggcattt aatgcaactt tatggggttt gcggtgattg
     1441 taataatcaa aaagcaaagg taaaaatata aatgtttgat aatactttgg aacaacaaag
     1501 aatagaaaaa gttaaagaat taaaaaatct aagaataaat ccttatcccc attttttaaa
     1561 aaaggaaatg tctttaaaga cttttaagga taaattttct tatattttag aacaagttga
     1621 aaaaagagat gaaggtgtca atgctgttgt tgcaggacgc ttgaaacttt tgcgtatagc
     1681 gggaaaatcg atttttgcaa atattgagga tgaagataca aatttacaga tttattttag
     1741 caaagacagt ataggtgaag agctttatgc gatcttgaaa aagaatttag aagtgggtga
     1801 tattgtttta gttaaaggtt ttccttttgt aactaaaaca ggtgagttta gtttacacgc
     1861 aagtgaggta aaacttgcta caaaagctat tattcctttg cctgaaaaat atcacggatt
     1921 aatagatatt gagcaaagat accgcaagcg ttatgttgat atgataatga atgcagaagt
     1981 tagaaaagat tttttagtac gttctaaagt ggtaagtttg atccgccact tttttgaaga
     2041 taaaggcttt ttagaagtag aaactcctat gatgcatccg attgcaggtg gggccaatgc
     2101 taaacctttt gtaactttcc ataattcttt gggtgtagaa agatttttaa gaattgctcc
     2161 agaactttat cttaaaagac ttgtagtggg tggttttgaa gctgtttttg aaatcaatcg
     2221 ttgttttaga aatgaaggta tggatttaac acataaccct gaatttacaa ctatagaatt
     2281 ttattgggct tatcataatt ataaagattt aatggattta actgaagaac tttttgcctt
     2341 gcttttagat aaacttaatt taggaaaagc aatagaattt gatggaaaaa tgatagattt
     2401 ttctaaacct tttgaaagga taacttataa agatgcactt tgcaaatatg gtggtttaga
     2461 taaagattta atcgaagata aagaaaaagt tcttgctaaa ttaaaagcag atggttttaa
     2521 agcaaatgaa aagctcgaac ttgggcattt acaagctgag ctttttgata attatgtaga
     2581 aaaaaaatta attaatccta cttttgtgat cgattttcct atttccataa gtcctttatc
     2641 aagacgcagt gatgaggatt ctcagattgc tgagagattt gagttattta tttgcggaag
     2701 agaattggct aatggtttta atgagcttaa tgacccactt gatcagtatg aaaggttttt
     2761 aaaacaaatt gaagctaaaa atgcaggtga tgaagaagca tgcgaaatgg atgaagattt
     2821 tataaatgct ttgggttatg gtatgccacc gacagcagga gaaggtatag gtatagatag
     2881 acttgttatg cttttaacaa ataaaaaatc tattcgtgat gtaatattgt ttcctgcgat
     2941 gcgtccatta aaatcagaat taaaggagaa agagtgagtt tagaaatgtt tgataaagaa
     3001 atttttgatt tgacaaataa agagttagag cgacaatgcg aaggtcttga aatgatagca
     3061 agtgaaaatt tcactttgcc tgaagttatg gaagttatgg gaagtatttt aacaaataaa
     3121 tatgcagaag gctatcctgg taaaagatat tatggaggtt gtgaatttgt tgataagatt
     3181 gaaatcttag ctattgaaag atgtaaaaaa ctttttgatt gtaaatttgc taatgttcag
     3241 cctaactcag gttctcaagc taatcaaggt gtttatgcgg ctttgattaa cccaggtgat
     3301 aaaattttag gaatggattt aagtcacggt ggacatttaa cccatggtgc aaaagtaagc
     3361 tcttcgggta aaatgtatga aagttctttc tatggtgtag agcttgatgg aagaattgac
     3421 tatgaaaaag taagagaaat taccaaaaag gaaaagccaa aattaatagt ttgtggagct
     3481 agcgcttatg caagggtgat tgattttgtt aaatttagag aaattgctga tgaggtaggt
     3541 gcttatcttt ttgctgatat agcgcatatt gcaggtcttg ttgtagcagg ggaacatcca
     3601 agtccttttc catatgctca tgtagtaagc tcaactacgc ataaaacttt gcgtggtcca
     3661 agaggcggca ttattatgac aaacgatgaa gaacttgcta agaaaattaa ttctgcaatt
     3721 tttccaggta ttcaaggtgg tcctttaatg catgtgattg ctgcaaaagc agtaggattt
     3781 aaattcaatc ttagtgatga gtggaaggtt tatgcaaaac aagttagaac gaacgctcaa
     3841 gttttagcta aggttttaat ggatagaaaa tttaaacttg ttagtgatgg aacagataac
     3901 caccttgttt taatgagctt tttagatcgt gaatttagtg gaaaagatgc agatttggct
     3961 cttgggaatg caggtattac cgcaaataaa aacactgttc caggagaaac tagaagtcct
     4021 tttataacaa gcggattaag acttggaacc ccagcgctta ctgctagagg ttttaaagaa
     4081 aaagaaatgg aaattgtgtc aaattatatt gcagatattt tagatgatat taataatgaa
     4141 aaattacaag agaatattaa acaagaacta aaaaaacttg caagtaattt tatcatttat
     4201 gaaagggcta tgttttgatt ttaccaatgg atatgtcact aattaaaata attagtgatc
     4261 attattatat aagacgcgat aagattgtaa ataaaattac acataggggt cgcttatttt
     4321 ttgataaatt tgaaagagtt gatgctcctt taaatttaaa tatcatgaaa gaacatgctg
     4381 ctaaaaaaat tgttgttgct catgatttaa taacaaaaga taataaagta gaaaatattg
     4441 tttttgatta caatggtttt aatgctgaaa gattttatca tcgtgcacag cttattttaa
     4501 gagaggaagg ttttataaat ttcacagcct ataggactaa aactccagga catttacatc
     4561 tttatattca taaagggcat acggcgttaa acgaagggta ttctttagcg tctaaacttt
     4621 caatgatgtt tgcaagtaaa atgccagtag aatggaaggt gtttcctagt atggatatac
     4681 ctagggaatt taatatttta atattgcctt acgaggttta tcaaaaagaa cgaggaagtt
     4741 cttggtctaa acatatgtaa aaaaggataa attatggaaa atcaaaaaaa tgaatttgat
     4801 gatattattt tagaaaaaag taataaaagt gaaaaagtaa aaaaaattct tttacgagtt
     4861 atggctttag ttattttatt tttagctatc atgatagtta tgaagcttat taatggtagt
     4921 ggtgatgaaa atacacaaaa tcaaagctta ttgccaagtg agcctgtaac aattcaagag
     4981 aataataacg atacttcttt tgaaagcatg ccaatcacgg ataatacttc agccgaagat
     5041 caatttgagg cattaagaaa acaattccaa gatgagcaaa atacgactca aaatacgaca
     5101 acttttagct caaataacaa tgatagtgca agttttacca tgcctgatca agaagctcca
     5161 gcagaaccaa acacagtgac ttcagagaac actactccac aagcaagtac ctctagacaa
     5221 gaagcaaagc aaacaattgt aaaaaaagaa actacaaaac aaactcctaa aagagaacaa
     5281 aatgcaaatg agttgtttaa aaatgtagat gctaaaccta tgcatccaag cggtttagca
     5341 tcgggcattt atgtgcaaat tttttcagta agtaatttag atcaaaaatc aaaagaactt
     5401 gcttctgtaa aacaaaaagg atatgattac aaactttaca aaactacagt tagtggcaaa
     5461 gaaattacta aggttttaat aggaccattt gaaaaagcaa atattgcagc agagcttgct
     5521 aagatccgta aagacatcgc aaaagatgct ttttctttta ctttaaaatg aaatttttag
     5581 cagttgtagg cgatcctatt tctcactcta aatcgcctag aatgcataat aatgccatta
     5641 aagctttaag gcttgatggc atttatacac gctatcattt gcaaaatgct aattatttaa
     5701 gagaagattt ttttaaatta ggacttagtg gggctaatat caccttgcct tttaaagaaa
     5761 aagctttaga tattgccgat gtgaaggatg attttgctag caatatcggc tctgcaaaca
     5821 ctttatgttt aaaagaagat aaaatttatg cttataacac tgatgcttta ggttttttag
     5881 aggctattaa agattttgat gatataaaaa aagctttgat tttaggtgct ggtggtacag
     5941 ctttggcgct tgcttatgca ctgaaagaaa aaggcgtaaa agtgtatgta gctaatcgta
     6001 gtaaagaaag atttaaagaa tttttagctt attcaactta tctttataag gacttgcaag
     6061 actttgattt tgatttggtt gtaaattcaa cttctgctgg attaaaagac gaaaatttac
     6121 cctgcgatag ggaactttta gataaaattt tacctagatc taaatttgct tttgaggtga
     6181 tttatggcag agaaacacct ttttatagat tatgtaaagg atataattta aaaatcaaag
     6241 atggacttga tatgctttta tggcaaggag tttttgcttt tgaacttttt tttgatatgc
     6301 aaaataaaag agagattata aaaaatgcaa tgcagcaagc attggtttta aaatagaatg
     6361 atagatattt ttgttgtata agaaaaatta ttttataaaa ctaaatttgc
//
LOCUS       DAPWAA010000083         6329 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.083, whole genome shotgun sequence.
ACCESSION   DAPWAA010000083 DAPWAA010000000
VERSION     DAPWAA010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6329
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.083"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            114..1826
                     /locus_tag="RTF91_001569"
     CDS             114..1826
                     /locus_tag="RTF91_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011812709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDZ4944432.1"
                     /translation="MHTSYALENELKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGR
                     DCLPTGVVPVTFKPTFLRYAKEYFLRVEFEDGSDIITNIEELPFYTDQRNEIKQAKSL
                     HIFAPVALLEKITLVDTPGLNANENDTLTTLDELKNIHGAIWLSLIDNAGKKSEEDAI
                     KANLELLGENSICVLNQKDKLNTEELNNVLNYAKSVFLKYFNELIAISCKEAKDEQSY
                     EKSNFQSLLDFLTHLDITALKEKFAKRKILNLCEILEDENQLFVGIFDHLLNQFQSYE
                     KHLLLAYEDFLKEIEILNHQILEQLKSISERISSEIFASVKEKDAYFYKESKGFLKKD
                     LYIRYDYKAPYISSDDAFLAMFYNSDVMSKEFKKIKNELYKSFEEIKTKLKDFINMLE
                     REILLFKAEFSNIQKDHILQSDKNFSELRAFCNASDEYFLKDFKELLFKSILELDLFF
                     EKLNLKAFTNYENAAKLSLAFFSRKINESRVLYEFDSSEFVLFYPKKSEIYERVLNEL
                     NVYEFEALLINKPILTKIVKNFLEQNQNLIQEKNKFLDLKKVELQRRKMQILNVRKSI
                     KEDR"
     gene            1823..2527
                     /locus_tag="RTF91_001570"
     CDS             1823..2527
                     /locus_tag="RTF91_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDZ4944433.1"
                     /translation="MRILLVLFLFFNSLFALSELEEGLRLYEANKFDKAHEIFKNLCE
                     KDISKACFSLGFMYESAKGVSKDLNQAYKFYNKACKLGLAGACSNMALLLQNQGHENE
                     ALLAFNKACTLGEALSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDK
                     GELVKASVKSALAFYSKSCILGFGEACYLLGRYNQLEKQDLTKAKRYFGMACDQKHQE
                     ACAAYKELNSQDIELY"
     gene            3354..3972
                     /locus_tag="RTF91_001571"
                     /pseudo
     CDS             3354..3972
                     /locus_tag="RTF91_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799400.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin"
     gene            4195..4395
                     /locus_tag="RTF91_001572"
     CDS             4195..4395
                     /locus_tag="RTF91_001572"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944434.1"
                     /translation="MAFLSDFNEAARLPKDYKINANWIKDLDQILTTTKLSFKALYDY
                     VDWAKELGNFYKENLQSFDKFG"
     gene            4379..4588
                     /locus_tag="RTF91_001573"
     CDS             4379..4588
                     /locus_tag="RTF91_001573"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944435.1"
                     /translation="MINLVDKELNITLKNNFTKNDILQELFVNKGLKMKEAKNTLYGK
                     INGFDSNTKQKDMNEFYAFMQKIIF"
     gene            4745..4888
                     /locus_tag="RTF91_001574"
     CDS             4745..4888
                     /locus_tag="RTF91_001574"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944436.1"
                     /translation="MDFKQRHDEFVKEYEIAMSDKSLSMKALNPYKAKVKIKQTYKDD
                     NKK"
     gene            4872..5078
                     /locus_tag="RTF91_001575"
     CDS             4872..5078
                     /locus_tag="RTF91_001575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944437.1"
                     /translation="MTIRNDLVKKPLEAKFSESKELELLFGMKFNDNKTEEFNQFIFQ
                     ITTLKSNRYKGLKLYKNFNHRKQK"
     gene            complement(5208..5873)
                     /locus_tag="RTF91_001576"
     CDS             complement(5208..5873)
                     /locus_tag="RTF91_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944438.1"
                     /translation="MQIRSSYNSYNYYSSNSSFDKTNQSDSTQKDDKNLTENKDDKEK
                     NSEQTQMVNGVELSQKEVQQVRELQSIDRNVKAHEAAHQAAGGGLAGAASFSYTRGPD
                     NQMYATAGEVPISMQKGNTPEETIANARQIAAAAMAPANPSPQDYKVAANAAKMEFEA
                     KAEAMKLKAEENKEKEEENKEKDDKNSENSLETTDKNFKNFVAKTYQQNSQNNDIKFN
                     IAS"
     gene            5979..>6329
                     /locus_tag="RTF91_001577"
     CDS             5979..>6329
                     /locus_tag="RTF91_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HDZ4944439.1"
                     /translation="MIYENDLIYIEKEESQVPWIKIFTKEIYKELSDCPLKLQKELFE
                     KILLCEKAMIEFYKPEKINIASFANYVPRVHFHIMSRFKEDAFFPECMWGKQQREVIK
                     LDLPQFEEFVKFLNT"
BASE COUNT         2348 a          735 c         1030 g         2216 t
ORIGIN      
        1 ttaatctttt aaatgatttt ataaaagcct atgaaaatac ttacagtgtg agttttgaag
       61 ataattttaa agggcgtatt caagagcttt gcaaaaagct taacgagcct tttatgcata
      121 caagctatgc tttggaaaat gaattaaaag agcttgtatt ttctttggat aagaatgtta
      181 atattgctat tatagggcag ttttcaagtg gtaaatcgag tttattaaat ttgattttag
      241 ggcgtgattg tttgcctaca ggtgttgttc ctgtcacttt taaacccact tttttacgct
      301 atgcaaaaga atatttttta agagtagaat ttgaagatgg aagtgatatt attacaaata
      361 tagaagaatt acccttttat acggatcaaa gaaatgaaat aaaacaagca aaaagtttgc
      421 atatctttgc acctgttgct ttacttgaaa aaattactct tgtagatact cctggtttaa
      481 atgcaaatga aaatgacacc ttaacaaccc ttgatgagct taaaaatatc cacggggcga
      541 tttggttgag tttaattgat aatgcgggta aaaaaagcga agaagatgcc ataaaagcaa
      601 atttagaact tttgggagaa aatagcattt gtgtattaaa ccaaaaagat aaattaaata
      661 cagaggagtt aaataatgtt ttaaattatg caaaaagcgt atttttaaaa tattttaatg
      721 agcttattgc tatttcatgt aaagaagcta aagatgaaca aagttatgaa aaatctaatt
      781 ttcaatcttt gcttgatttt ttaacccatt tagatataac agctttaaag gaaaaatttg
      841 ctaaaagaaa aattttaaat ttatgcgaaa ttttagaaga tgaaaatcag ctttttgtgg
      901 ggatttttga tcatttatta aatcaatttc aaagttatga aaagcacttg cttttagcgt
      961 atgaggattt tttaaaagag attgaaattt taaatcatca gattttagaa caacttaaaa
     1021 gcatcagtga aagaatttct agtgaaattt ttgcaagtgt taaagaaaaa gatgcttatt
     1081 tttataaaga aagtaaggga tttttaaaga aagatttata cataaggtac gattataagg
     1141 ctccttatat ttcaagtgat gatgcttttt tagcaatgtt ttataatagt gatgtgatga
     1201 gtaaagaatt taaaaaaatc aaaaatgaac tttataaatc ttttgaagag attaagacaa
     1261 aattaaaaga ttttataaat atgcttgaga gagaaatttt actttttaaa gcagaatttt
     1321 caaatataca aaaagatcat attttacaaa gtgataaaaa ttttagtgaa ctaagagctt
     1381 tttgtaatgc aagcgatgag tattttttaa aagattttaa agaactttta tttaaaagca
     1441 ttttagaact tgatttgttt tttgaaaaat taaatcttaa agcttttaca aattatgaaa
     1501 atgctgcaaa actaagcctt gcatttttta gtcgtaaaat caatgaaagc cgtgttcttt
     1561 atgagtttga cagttctgaa tttgtacttt tttatcctaa aaaaagtgaa atttatgaaa
     1621 gagttttaaa tgagcttaat gtctatgaat ttgaagcttt gcttattaat aaacctattt
     1681 taacaaaaat tgtaaaaaat tttttagaac aaaaccaaaa tttaatccaa gaaaaaaata
     1741 aatttttaga tctcaaaaaa gtagaacttc aaagaagaaa aatgcagatt ttaaatgtta
     1801 gaaaaagcat aaaggaagat cgatgagaat attgttagtt ttatttttat tttttaattc
     1861 attatttgca ttaagtgagc tagaagaggg tttaaggctt tatgaggcaa ataaatttga
     1921 taaagctcat gaaattttta aaaatctttg tgaaaaagat atttctaagg cttgcttttc
     1981 tttgggtttt atgtatgaaa gcgctaaagg tgtgagtaag gatttaaatc aagcttataa
     2041 attttataat aaagcttgta aattaggttt ggcgggtgcg tgttctaata tggctttact
     2101 tttacaaaat caaggccatg aaaatgaagc tcttttagct tttaataaag cttgcactct
     2161 aggagaagca ttaagttgta ataatatagc tttattttat gaaaaagaaa aagatgggca
     2221 aatggcgtca agtttttata aaagatcttg cgacttaaaa aatgcaagag cttgttatca
     2281 attaggatct ttgtatgaca aaggagagct tgtcaaagca agtgtaaaat ccgctcttgc
     2341 tttttattct aaatcttgta ttttaggttt tggtgaggct tgttatttat taggacgcta
     2401 taatcagtta gaaaaacaag atctaacaaa ggcaaaaaga tattttggta tggcttgtga
     2461 tcaaaaacat caagaagctt gtgcagctta taaagaactt aattcccaag atatagagct
     2521 ttattaaaag ttctattttt gctactttta aaataaactt aaaaaataat aaatttatac
     2581 taatagactt gtttaaatta ttatcaagga gaaattaact ctagcacttt ggtagccgtg
     2641 ctgtttaaaa gcagcagatc ttacattcac aatcaagctt cgcaagaaaa atcaagtaaa
     2701 attagaggca gaatgttttt taaattcaag cgaattttta aaccttaagt gcagcctgtg
     2761 aaagaattta tcctaagcat gagtaagcta taggttggcc ttgccttatc gtaaaatgga
     2821 ttcgttttat taggtaataa tgtcggtggc acattggact ttagttacaa gaatggctta
     2881 aaatactaaa atgctttgaa agtgcagcaa agctcaaatt tacacagcta tcgtttgtca
     2941 acttgctagc taaaccctga tggttaagat ttagctcctt gttaatactg tgtgtattgt
     3001 gaatgctttg ttgcgagata gtagtttcaa aggcgatgaa cacagataat aagtatgcta
     3061 tacgtacttc agcggtgcaa tgcaaattct taaaaaagac gaaaagtaac tggcttgtcg
     3121 atactagaac gatgaaagag tgtaatcaac ctgctgatat aataatgctt ataagtttat
     3181 gtttaacaat aacacaaccg actaaaacca taaatttttt catcttaatt accaccttta
     3241 aaatattttg taacaatttc ataaaagcaa cgaatgttct aaattaaatt tgaattaata
     3301 tatgatttta taaatgtaaa taaatagcaa atatagcata ataaggagaa attatgccaa
     3361 aaaaattagc aagtttatta atcttaagtt ctttattgat aagttctact tttgcagatg
     3421 atttcttagc caaagtgagc aatggtgaaa taagtgataa ttttcaaggt gtaaaagttt
     3481 ttaatttaga tgagatgaaa gaggttaagg gtgggtatta tatactagat actaaattca
     3541 atcaagataa actaaatctt acttctgaat tttatcttgt aggaaatttc catccaggag
     3601 aaatagatta tattaaaatt atattcttaa agttccaaac gtcgaaaaag gattatgcgg
     3661 gcttgataca gcaagttatc ccatcctagt gagagaagac ttatggatta ccttgatatt
     3721 acaaataaat cttatacttt ttctcctgta tatcatagta aaaagacaaa ttaaaagatc
     3781 taatttagga cagccatatg ttttttctca tatcaagttg atgtaagaga tgtaaatggg
     3841 taatattata aatttgattc tacaacttct agtagattat taaattataa tatgattatt
     3901 aaagaaatga ctcaaaaata taagtcccaa attgaaagtg caatgggagg ttataatcct
     3961 aatgttatgt aattttattt taatgatatt atagaatttt atatttagaa aaaataatgg
     4021 taaatgaaat atcaaattta aattacaatt acacaaacat cttaaatttt aaaaagtagg
     4081 aatttagcga gacaaattca aatgctactc aaaataaaga aacacaaaaa gtaaatttag
     4141 tcagtgataa agccaaagct acaagtcaaa tcttaggtta cggtgtggat aaagatggct
     4201 tttttaagtg attttaatga agcagcaaga ttaccaaaag attataaaat caatgcaaat
     4261 tggataaagg atttagatca aattttaact acaacaaagc ttagtttcaa ggccttatat
     4321 gattatgtgg attgggcgaa agaattgggt aatttttaca aagaaaattt gcaaagtttt
     4381 gataaatttg gttgacaaag aattgaatat cactcttaaa aataatttta ctaaaaatga
     4441 tattttacaa gaactttttg taaacaaagg gcttaagatg aaagaagcta aaaatactct
     4501 ttatggtaaa attaacggct ttgatagcaa tacaaagcaa aaagatatga acgaatttta
     4561 tgcttttatg caaaaaatca tcttttaaaa atatcgtttc tgatacttga ataaagtaat
     4621 tgcaaactta tatttcttat gctgtgagtt ttcatttgga taattctttg gtgcaaaaag
     4681 ccaaagtgaa tttgatgagc ttatcagtga agatttaacc ccggaagaat ttaaaactaa
     4741 atatatggat tttaaacaaa gacacgatga atttgtaaaa gaatatgaaa ttgctatgag
     4801 tgataaaagc ctatcgatga aagctttaaa cccatacaag gcgaaagtaa aaattaaaca
     4861 aacctataaa gatgacaata agaaatgatc ttgtaaaaaa accattagaa gctaaattta
     4921 gcgaaagtaa agaattagaa cttctttttg gtatgaaatt taatgataat aagacagaag
     4981 aatttaatca gtttattttt caaattacta cactaaaaag caatagatat aagggcttaa
     5041 aactatacaa aaattttaat catagaaagc aaaaatgaaa aaaatcatct tgggtttaac
     5101 acaaaaatga taagcttttt agatatatct gtttgatttt atttgtaaaa gaaaagataa
     5161 atacaaattc ttatttaaat tatggcaact aataccaaat aagggtttta agatgcgata
     5221 ttgaatttaa tgtcgttatt ttgtgagttt tgttgataag ttttggcgac aaaattttta
     5281 aaatttttat ctgttgtctc taagctattt tctgaatttt tatcatcttt ttctttattt
     5341 tcttcttctt tttctttatt ttcttcggct ttaagtttca ttgcctcagc ttttgcttca
     5401 aattccattt ttgctgcatt tgctgcaact ttgtaatctt gcggactagg attagcagga
     5461 gccatagctg ctgcagcaat ttgtcttgca ttggctatag tttcttcggg ggtgtttcct
     5521 ttttgcatgc tgataggaac ttcacctgct gttgcgtaca tttgattatc ggggcctctt
     5581 gtatagctaa agcttgcagc acctgctaaa ccaccacccg ctgcttgatg tgcggcttca
     5641 tgggctttta catttctatc gatgctttgg agttcacgaa cttgttgcac ttctttttgg
     5701 cttagctcta cgccattaac catttgggtt tgttcactat ttttttcttt atcatcttta
     5761 ttttcagtga gatttttatc atctttttgg gtggaatcag attgatttgt tttgtcaaag
     5821 gaagagttac tagagtagta attataagag ttataacttg atctaatttg catttcctct
     5881 ccttaattta aatttattaa gaattttaac gcattttgac ttaaaaattt aataaatttt
     5941 gtaaaataat cacaaataca atattcaaag gaatgtaaat gatttatgaa aatgatttga
     6001 tttatataga aaaagaagaa tctcaagtgc cttggattaa aatttttacc aaagaaattt
     6061 acaaggaatt aagtgattgt cctttaaagt tgcaaaagga gctttttgaa aaaattttgc
     6121 tttgcgaaaa ggctatgata gaattttata aacccgaaaa gattaatata gcttcttttg
     6181 caaattatgt gccaagagtg cattttcata ttatgtcaag gtttaaagaa gatgcgtttt
     6241 ttccagagtg tatgtgggga aaacagcaaa gagaagtgat aaagcttgat ttacctcaat
     6301 ttgaagaatt tgtcaaattt ttaaatact
//
LOCUS       DAPWAA010000084         6272 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.084, whole genome shotgun sequence.
ACCESSION   DAPWAA010000084 DAPWAA010000000
VERSION     DAPWAA010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6272)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6272)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6272
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.084"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            69..1908
                     /locus_tag="RTF91_001578"
                     /pseudo
     CDS             69..1908
                     /locus_tag="RTF91_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004308388.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
     gene            1925..2164
                     /locus_tag="RTF91_001579"
     CDS             1925..2164
                     /locus_tag="RTF91_001579"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944440.1"
                     /translation="MAKDMHKEGWDNATLTKLDVFDQYVYEWLIVVLNYGIKPPFDIV
                     EIYDLFCGTGFDGTKTHKGSPLRILDTLRTIKFRS"
     gene            2281..2931
                     /locus_tag="RTF91_001580"
     CDS             2281..2931
                     /locus_tag="RTF91_001580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944441.1"
                     /translation="MLDQYGIKHLEKINNFLQKGTDVLIFVSSGHIRRFCEDANFEKY
                     IKIPKEIFIKKPFYETHRTIVKYLRELFPKAYISPFTLIKDNENINGLIFFSAHRKGQ
                     EQFLKTAWKIDKDFGEGNINIDKDISREKGTLFYNENIPTQKEEEYKSLLLEFLREKR
                     NNIEIRNFGLDNGFLVKHTNVILKEIKNKLKCEYYGANFGFHLDKKEIKVYIWLKK"
     gene            2928..3659
                     /locus_tag="RTF91_001581"
     CDS             2928..3659
                     /locus_tag="RTF91_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011992115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage Gp37/Gp68 family protein"
                     /protein_id="HDZ4944442.1"
                     /translation="MKPTKIEWTQASWNPSIGCDKISEGCRNCYAEIMAKRLQAIGNL
                     DYKDGFKFKMLPHRLNDPLQNKKPTLYFVNSMSDLFHEKMDFNFLDQIMNTIKQTLYH
                     QYQILTKRPSKMRKYFLDKKILNNIWLGVTIESKQVKKRIDLLRDLPAKIKWLSCEPL
                     LNDLGNLNLSGIDWVVVGGESGSSARMVKKEWIINIQRQCKEQNTAFFFKQWGTYGED
                     GIKRNKKENGALLNGKIFRAFPNKQ"
     gene            complement(3674..4013)
                     /locus_tag="RTF91_001582"
                     /pseudo
     CDS             complement(3674..4013)
                     /locus_tag="RTF91_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284782.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
     gene            4213..5307
                     /locus_tag="RTF91_001583"
     CDS             4213..5307
                     /locus_tag="RTF91_001583"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDZ4944443.1"
                     /translation="MKTFLVCALEPSANLHLKEVLNAYKKDFGEFELYGIYDENLCKE
                     FDLNSKPFYSSHEFSAMGFIEILPLIFKAKRAIKELVNLSLTQKIDGVLCIDSPAFNI
                     PFAKALKKAGSKTRRIYYILPQVWAWKKGRIPIIESHFDILASILPFDKNFFNKSTYI
                     GHPILDEIREFKNQNDINILLSKKESKKTIAFLPGSRRSEITRLMPVFRELSQKFKGE
                     KILCVPLFNLEKLEIYGDISEFKIESNTPKVLKKADFAFICSGTATLEAALVGTPFVL
                     AYKAKAIDIFIAKLFVKLKHIGLANIFCDFAGKEALNPEFLQDEVNVLNLYEAYNKYD
                     YKAFFAKVDFLKEYLKFGSAKNLAKILSKT"
     gene            5319..5804
                     /gene="greA"
                     /locus_tag="RTF91_001584"
     CDS             5319..5804
                     /gene="greA"
                     /locus_tag="RTF91_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDZ4944444.1"
                     /translation="MQKEPMSQFGYDKLAAELKDLKDNQRPAVVIEIDTARSHGDLKE
                     NAEYHAAREKQALIESRIAELSDLLARAQVIDPSSYEHDSVKFGSSVVIMDLDTEKES
                     KYTLVGICEGNLDKGYISIASPIAKAMLGKKEGDDFKVRLPKGESEFEIISINYEPLK
                     F"
     gene            5841..>6272
                     /locus_tag="RTF91_001585"
     CDS             5841..>6272
                     /locus_tag="RTF91_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDZ4944445.1"
                     /translation="MADAHENEQRRGFWEFLQALKKDEIYTSQLILMGDIFDLLIGEI
                     SATHEFAKPYIELLEELTLKIEIIYLEGNHDFNLTRFFKKVKIFNLQEQPIKLNLHIS
                     KGNNLVLNNSFIKLAHGDIFLPPLLQFALKTLRNHYLLIFLN"
BASE COUNT         2495 a          773 c         1011 g         1993 t
ORIGIN      
        1 tatttttaac acaagaataa acaaacaaga attaattcat tgtatcaatg aagttttaaa
       61 ggataacaat gcttgatata aataaaatca aaaaagaaaa tataatcaac acgcagaaaa
      121 acaaaaacga acttttagag tatttaaagc taaatttccc acaaagcata aaagacggac
      181 aagtagattt aaaggctatt gctatgcttt taggtttaaa taataaagaa attagaggct
      241 atgagctaaa tttcacagga aaagctttag caaatgctct ttatgacacc ccaaacacta
      301 aagaattgaa atttcatcaa gatttaagca aaaactatga aactaccaaa aatattatca
      361 tcaaagggga taatcttcat gttttaaaac ttttaaaatc cgcctactat gaaaaaataa
      421 aaatgatcta tatcgatccg ccctacaaca ctaaaaatga taaatttatt tataatgatg
      481 attttgtaaa agaacataaa aaactcttaa tggaagttgg acttctagag atcgatgaag
      541 aaggcgaaga aattagaagt gaaattttaa attttttcat caatcaaaaa ggtgatagaa
      601 gtcatagcgc atggcttggc tttatgctac cacgacttaa acttgctaga gatttgcttc
      661 gtgaagatgg agtgatattt ataagcatag acgataacga acaagcaaat ttaaaaattc
      721 tttgtgatga gatttttgga gaagagaatt ttgtttcttg ttttatttgg caaaaaaaat
      781 caggcggagg acaggcaaaa tatttttacg aagggcatga gtatatactc atatatacaa
      841 aagataaagc aaatttaaat ggacttttta aatttaaaga aaaaccagaa attaacaatg
      901 atttaataag aaaagtccat ggtaaatata ccaataacaa atccattaaa aaaattttag
      961 cattatatcc aaaagacact cttgatcata gaaatttaat gtttgaagaa ttagatattt
     1021 ttttaaaaga aaatatgatt agtgagaaaa aatataatga tataaaatca aaaattaaca
     1081 atggcgagta ttttttcagc aatataaaga tacaaaattt catcttattt gttcttatta
     1141 tgatgataat ttatcaaaaa tgtattccat atttagtgga tattggacct cagatggaaa
     1201 tgaagaaata gaaagtatat ttaatggtaa gttggttttt gaaaatccaa aaccaaccac
     1261 tttaatcaag gaaatatttt ttgcaaatac aaaagaaaat gatattatcc tagacttctt
     1321 tgcaggtagt ggcacaacag cacaagcagt tatggaacta aatgcagagg ataatggcaa
     1381 tcgcaaattt atcttagtgc aacttgatga gcctatcaat gaagaaaaaa gtaaaatcgc
     1441 ttatgatttt tgcaaaaatg agttaaaaag ccaagaaccg gttattagtg atataaccat
     1501 tgaaagaatt aaaagagtgg gcaagaaaat ttcaaaagaa aatagggata aaaatttaga
     1561 tttaggtttt aaagtatttt ctcttacaga aaaaccagaa tttatcaaag atgatttaaa
     1621 tactttaaat ttaagatatc atgagaattt aaatccttat gaaaaagctt taaacttagc
     1681 tttgcaagat ggtaaaactt tggataaaga attaaaaatg attttaaaag ataaacttta
     1741 tcaatgtgag gaaagttttt atatcgtaaa aagcgatgat gaagttttag aacttttaag
     1801 aaaaacacaa aatgaaaatg taatattaac ggatatgatg atataaattt agaagattat
     1861 ttaaatcttg aaagcttttt aaaagaacgc ttaaaaatgg tgtattagca aaaagggaat
     1921 tgttatggca aaagatatgc ataaagaggg atgggataat gcaacattaa caaagctaga
     1981 tgtttttgat caatatgttt atgaatggtt gattgtagtg ttaaattatg gaataaaacc
     2041 tccatttgat attgtggaaa tttatgactt attttgtggc actggatttg acggaacaaa
     2101 aactcataag ggttctccat tacgaattct tgacacatta agaactataa aatttcggag
     2161 ttaaaaaaga acatccaaaa gcattatcca aacctttata ataaaaatat tgagtttaga
     2221 tatactattt gcgatgttaa agattatgaa attttttcaa aaaaatacta taaacttatt
     2281 ttgttagatc aatatggaat taagcatctt gaaaaaatta acaatttttt acagaaagga
     2341 acggatgttt taatttttgt ttcatcggga catattcgaa gattttgcga agatgcaaat
     2401 tttgaaaaat atataaaaat tcctaaggaa atttttatta aaaaaccttt ttatgaaact
     2461 cataggacaa ttgtaaaata cttaagagaa ttatttccta aagcatatat ctcgcctttt
     2521 actttgatta aagataatga aaatatcaat ggattaatat ttttctctgc tcacagaaaa
     2581 ggacaagaac aatttttaaa aactgcttgg aaaatagata aagattttgg agaaggaaat
     2641 ataaatatag ataaagacat ctctagagaa aaaggaactt tgttttacaa tgaaaatatt
     2701 cctacacaaa aagaggaaga atataaaagt ttattgttag agtttttaag agaaaaaaga
     2761 aacaatattg agataagaaa ttttggttta gacaatggat ttttagttaa acatacaaat
     2821 gttattctta aagaaattaa aaataagtta aagtgtgaat attatggtgc aaattttggt
     2881 tttcatttag ataaaaaaga aataaaagtt tatatttggc tcaaaaaatg aaaccaacca
     2941 aaattgaatg gacacaagcc tcttggaatc cttcgatagg atgcgataaa attagtgaag
     3001 gttgtagaaa ttgctatgct gaaattatgg cgaagcgact tcaagcgata ggaaatcttg
     3061 attataaaga tgggtttaaa tttaaaatgc ttcctcatcg cttaaatgat cctttacaaa
     3121 ataaaaaacc gaccctttat tttgttaatt ctatgagtga tttgttccat gaaaaaatgg
     3181 attttaattt cttagatcaa ataatgaata ctataaaaca aacactctat catcaatatc
     3241 agattttaac taaaagacct tctaaaatga gaaaatattt tttagataaa aaaatattaa
     3301 ataatatatg gcttggagtt accattgaat ctaagcaagt aaaaaaacgc attgacttac
     3361 ttagagattt acctgcaaaa atcaaatggc tttcttgtga accattactt aatgatttag
     3421 gaaatttaaa tttaagtgga attgattggg ttgttgtggg tggagaaagt ggtagcagtg
     3481 caagaatggt aaaaaaagag tggataataa atatacaaag acagtgtaaa gaacaaaaca
     3541 cggctttttt ctttaaacaa tggggaactt atggagagga tgggattaaa agaaataaaa
     3601 aagaaaatgg tgcattactt aatggaaaaa tatttagagc ttttcctaat aaacaataat
     3661 ttaaatcctt gatttaactc aagaatttaa caaaataaaa ctcaccgccg tgggttttat
     3721 cgtaagtttt tacagcagac agtagctcat caaaagagat aaataccata atcccaacca
     3781 ccacagcaaa agtaataacc aaaggtaagc tcattcacaa taggcaagat caaaaacgcc
     3841 cctataggtt ctgccacccc agaaagtgcc gagtaaataa aagctttttt cttatcattt
     3901 atagcataat aatttggcaa agaaactgcc ataccttcag ggatattgcg tatcgctact
     3961 gctacagcaa tagccactcc aaagcttaga ttatcaaggt ttgaaataaa agtcgtaaaa
     4021 ctctctaaaa ttatatatca ctggtaagag tgataaaatt tctcattctg tttaaaggct
     4081 tagtgttaat ttttgagagg ctctctcata aaacagtact ttttattgtt cttaggcaaa
     4141 gaataaaggg taataaaagt cttaagtgaa aattggctat aattttgttt taaaattcaa
     4201 aaaagagaga aaatgaaaac ctttttagtt tgcgccctag agccctcggc aaatttgcat
     4261 ttaaaagaag ttttaaatgc ttataaaaaa gactttggtg aatttgaact ttatggaatt
     4321 tatgatgaaa atttatgcaa agaatttgac ctaaattcta agccatttta tagctcacat
     4381 gaatttagtg ctatgggctt tatagaaatt ttgcctttga tttttaaagc aaaaagagcg
     4441 atcaaagagc ttgtaaattt aagtcttact caaaaaatag atggggtttt atgcatagat
     4501 tctcccgcct ttaatatccc ttttgctaaa gctttaaaaa aagcaggtag taaaactcga
     4561 cgcatttatt atatcttgcc tcaagtttgg gcatggaaaa aaggacgtat tcccatcata
     4621 gaaagtcatt ttgatatttt agcttctatc ttgccttttg ataagaattt ttttaacaaa
     4681 agcacctata tagggcatcc tattttagat gaaataaggg aatttaaaaa tcaaaacgat
     4741 atcaatattt tgctttcaaa aaaagaaagt aaaaaaacta tagctttttt acccggttca
     4801 agacgtagtg aaattacgcg tttgatgcct gtttttagag aactctcgca aaaatttaag
     4861 ggtgaaaaaa tcctttgtgt tcctctgttt aatcttgaaa aattagaaat ttatggtgat
     4921 attagtgaat ttaagataga aagtaatact ccaaaagtgc ttaaaaaagc tgattttgct
     4981 tttatttgta gcggtacagc tactttagaa gctgctttgg ttggaacacc ttttgtttta
     5041 gcctacaagg caaaagctat tgatattttc attgcaaaac tttttgtaaa attaaaacat
     5101 atcggccttg caaatatttt ttgtgatttt gctgggaaag aggctttaaa tcctgagttt
     5161 ttacaagatg aagtgaatgt tttaaattta tatgaagctt ataataaata tgattataag
     5221 gcattttttg ctaaagttga ttttttaaaa gagtatttaa aatttggaag tgctaaaaat
     5281 ttagcaaaaa tactaagcaa aacataaaag gacaaatcat gcaaaaagaa ccaatgagtc
     5341 aatttggcta cgataaatta gctgctgaat taaaagattt aaaagacaat caacgtcctg
     5401 ctgttgtgat agaaattgat acagcaagaa gtcatgggga tttaaaggaa aatgcagaat
     5461 atcacgctgc aagagaaaaa caagctttga tagaaagtcg tatcgccgaa cttagtgatt
     5521 tacttgcaag ggctcaagtg atcgatcctt caagttatga acatgatagt gtaaaatttg
     5581 gttcaagcgt tgtgattatg gatttagata cagaaaaaga aagcaaatac actctagtag
     5641 gaatttgtga aggcaatcta gacaagggtt atatttctat cgcatctcct attgcaaaag
     5701 ccatgcttgg aaaaaaagaa ggtgatgatt ttaaagtgcg tttaccaaaa ggtgaaagtg
     5761 aatttgaaat catttctata aactatgaac ctttgaaatt ttaaggatat aaaattttac
     5821 ttcacaatgg agcgatttta atcgcagatg ctcatgaaaa tgaacaaaga agaggatttt
     5881 gggaattttt acaagcttta aaaaaagatg aaatttatac ctctcaactc atacttatgg
     5941 gtgatatttt cgatttgctt ataggtgaaa tttctgctac acatgaattt gctaaacctt
     6001 atatagaact cttagaagag cttactttaa agatagaaat tatctactta gaaggaaatc
     6061 acgatttcaa tcttactcgc ttttttaaaa aggttaaaat ttttaacttg caagaacagc
     6121 ccataaaact taatttgcat ataagtaaag gtaacaacct tgttttaaat aattctttca
     6181 taaaattagc tcacggagat atttttctgc ctccactttt gcaatttgct cttaaaacat
     6241 taagaaatca ttatttactt atatttttaa at
//
LOCUS       DAPWAA010000085         6210 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.085, whole genome shotgun sequence.
ACCESSION   DAPWAA010000085 DAPWAA010000000
VERSION     DAPWAA010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6210
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.085"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..208)
                     /locus_tag="RTF91_001586"
     CDS             complement(<1..208)
                     /locus_tag="RTF91_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosome-binding GTPase"
                     /protein_id="HDZ4944446.1"
                     /translation="MIISAKFITSLAKFDKNFTSNFSEVAFLGRSNVGKSSLINSLCK
                     QKNLAKSSATPGKTQLINFFEVTCK"
     gene            complement(205..666)
                     /locus_tag="RTF91_001587"
     CDS             complement(205..666)
                     /locus_tag="RTF91_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic solvent tolerance protein OstA"
                     /protein_id="HDZ4944447.1"
                     /translation="MVARQIILFLVCVNVTWATQIEVKALNFYSDENKGESILSGNVE
                     VIRGDDILNSEKLIIYTDKNRKPIRYEAMQNARFKIVLKGKTYKGSGDKFIYNVVKDT
                     YEIDGHAYINELGSNQKLFGDKIIVDRKANIYQVQSKDQKPTRFVFDLKDK"
     gene            complement(648..1160)
                     /locus_tag="RTF91_001588"
     CDS             complement(648..1160)
                     /locus_tag="RTF91_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944448.1"
                     /translation="MAIKIFGILIALFTITFTILSLQDPYSLNLQTNALNFKNIEAQN
                     LKAYESNTSTIKAYYKANSWVRYADRDEFNDFITLNLDFNLSANYLEFFNKDMSKVLF
                     EGNVTYIGANVKIISQEVEYDPKDKILHTNANFKALINGSIINGNTLNYDIKNKILNI
                     QGVNAWLQDK"
     gene            complement(1151..1639)
                     /locus_tag="RTF91_001589"
     CDS             complement(1151..1639)
                     /locus_tag="RTF91_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HDZ4944449.1"
                     /translation="MTELIFLDVDGCLTDGKIIYTSNGEFIKEFDVKDGAAIEAWLKL
                     GKKVAIITGRNCPCVEKRAKDLKIEILHQGIKDKLTCAKEILQKLDLDFSQCAAIGDY
                     FNDKALLESVGLSFKPKDGHKDLNVDIVLSKKGGKAAVAQMIEILIEKNHLEKEWNKL
                     WL"
     gene            complement(1646..2473)
                     /locus_tag="RTF91_001590"
     CDS             complement(1646..2473)
                     /locus_tag="RTF91_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HDZ4944450.1"
                     /translation="MQIKTITLKLSAVSLWGLFFSGCLGTSFFSSMDNAQVYYPSNDF
                     KSSPSSSGTKGTMKPYTINGKTYYPTVVAVGESADGIASWYGPGFHGKKTSNGETYDQ
                     NGLTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMITS
                     GTAPVRLEVIGFGSSNSGNNIVHSNVNYGNNGEIVNNGQIYEGGNFMVQIGAFKNPAG
                     AQTIAARYKTYRTYSSTIRTSSIDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE"
     gene            complement(2433..3551)
                     /locus_tag="RTF91_001591"
     CDS             complement(2433..3551)
                     /locus_tag="RTF91_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDZ4944451.1"
                     /translation="MKKVLFYFLICFNFLFAQINTPEFYERQMNVLRNLDINPSFISD
                     LIFVQTQQDIKSKHTQTLIDSMQNFSKVTPMIRKILDQQGVPGEILYLAMVESGLKTH
                     SVSNAKAVGVWQFMQPTARNLGLRIDAYVDERRDPVKSTYAATNYLKELKEEFGKWYL
                     ALLAYNCGNGKLRQAIKQARSDDLSVLLDPNKKYLSLETRNFIRKILTLAFLANDRDF
                     LVDKDASLMNYALSNEFAKVDVPSSASLKEIAKNLNMDLVTFKKYNPQFKHNFTPPGK
                     GYYMYIPLNKVAFFDKNFKAEKLAKVDTTIPMTRTYTVKSGDSLYKIAKKYNISVDEI
                     REFNKIARNHLSINQKLIIPIKENKNANKNNYTKVVSR"
     gene            complement(3551..4366)
                     /locus_tag="RTF91_001592"
     CDS             complement(3551..4366)
                     /locus_tag="RTF91_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDZ4944452.1"
                     /translation="MFLNLDFQDGLRIIDTHCHLDSEAFKDDLDETLNRAFKNGIEKI
                     IIPGADIKDLPYAATIAHKYKNIFFAAGVHPYEIDGYDEEILRQYLCNEKCVAVGECG
                     LDYFRFKSEFAEEIQKEKENQKKIFIAQLELAIEFKKPVIIHSREANHDAYEILHEYS
                     KDLVGGVLHCFNASEHLLALFEEGFYFGIGGVLTFKNAKKLVEILPKIPKDRLLLETD
                     APYLTPEPYRGKRNEPLLSQFVANKMCEVLNLSRKELLEICFSNSEKLFFKGY"
     gene            complement(4357..5601)
                     /gene="cbrR"
                     /locus_tag="RTF91_001593"
     CDS             complement(4357..5601)
                     /gene="cbrR"
                     /locus_tag="RTF91_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile resistance response regulator CbrR"
                     /protein_id="HDZ4944453.1"
                     /translation="MSKKILIIDDNKMLGKLLAKKIQMTLDYEVDIAFGFAETKELMN
                     NDYFLAFVDLCLPDAPNGEVVDYVIEKKIPAIVLTASNDKATKEKFMDKDILDYIFKE
                     SETCIDDIIGSIMKLNQYAKTKVILAMSKLSERNEIKKILTQRQFNVLAAAHGEEAMS
                     YLNDNNDVKLIVADVNMPVISGFELLTQVRERFSDDELGVILLGDHNDSFEANSFKNG
                     VNEYLFKPLSKESFNCRLDRCLSYMDDKKILSTYNILDPVSGVKNYNALINGIDDYFN
                     EIATKDEEFAFAFLDVDNLQMINDEYGHGVGDEVIKICANEIVNETKGRDLVGRYSAE
                     KICILLKNISQERAIKIFSRIRVNIKKVGVLVNLDEVFFTASIGVVFGKSGDKIDSLV
                     DKASKILSQAKDNGKDRVEVCS"
     gene            complement(5702..>6210)
                     /locus_tag="RTF91_001594"
     CDS             complement(5702..>6210)
                     /locus_tag="RTF91_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA recombination protein RecN"
                     /protein_id="HDZ4944454.1"
                     /translation="KLEKYLNDYLKNLYMKDANLTLKENEKISILGKDEVMLDINLAN
                     LKNLSSGELNRLRLAFIATECKILNAGKGILFLDEIDSNLSGKEAMSIAKVLEELSRF
                     YQIFAISHLPQVSSKAHNHFLVEKNGEESKVKKLNQEERIKELARMVSGELVSDEAIE
                     FAKTLFKN"
BASE COUNT         2092 a         1141 c          691 g         2286 t
ORIGIN      
        1 ttttacaagt tacttcaaaa aaatttataa gctgagtttt tccaggagtt gctgaacttt
       61 tagctaaatt cttttgtttg cacaaagaat taatcaaaga gctttttcca acattagaac
      121 gccctaaaaa ggctacttca ctgaaatttg aagtgaaatt tttatcaaat ttcgctaaag
      181 aagtaataaa tttagcacta attatcattt gtcttttaag tcaaacacaa aacgagtagg
      241 tttttgatcc ttgctctgta cttgataaat attagctttt ctatcaacta ttattttatc
      301 accaaaaagt ttttgattac ttccgagttc atttatatag gcatggccat caatctcata
      361 agtatctttg acaacattat aaataaattt atctccgctg cctttataag ttttaccttt
      421 taaaacaatt ttaaatctag cattttgcat tgcctcataa cgaataggtt tgcgattttt
      481 atctgtataa ataatcaatt tttcagaatt taaaatatca tcacctctaa tcacttccac
      541 atttccacta agaatacttt cacccttatt ttcatctgaa taaaaattta aagcttttac
      601 ttcgatttga gttgcccaag tcacattaac acaaactaaa aataaaatta tttgtcttgc
      661 aaccacgcgt ttactccttg gatatttaag attttatttt ttatgtcata gtttaaagta
      721 tttccgttaa taatacttcc attgattaga gctttaaagt tagcatttgt atgcaaaatt
      781 ttatccttag gatcatattc tacctcttgg gaaataattt tgacattagc acctatatag
      841 gtaacatttc cttcaaataa aaccttgctc atatccttgt taaaaaactc taaataattt
      901 gcactaagat taaaatctaa atttaaagta ataaaatcat taaattcatc tctatctgca
      961 tatcttaccc aagaatttgc cttatagtat gccttaattg tgctggtatt gctctcatag
     1021 gcttttaaat tttgagcttc aatgttttta aaatttaaag cattagtttg caaatttaaa
     1081 gaatacggat cttgtaaact caaaatcgta aaagtaatcg taaaaagagc aattaaaatt
     1141 ccaaaaattt ttatagccaa agcttattcc attctttttc tagatgattt ttttctatca
     1201 aaatttctat catctgtgct actgcagcct ttccaccttt tttgctaagc actatatcta
     1261 catttaaatc tttatgccca tcttttggtt taaaactaag tcctacgctt tcaagtaaag
     1321 ctttatcgtt aaaataatct ccaatagccg cacactgaga aaaatccaaa tcaagttttt
     1381 gcaaaatttc ttttgcacaa gttagtttat ccttgatacc ttgatgtaaa atttctattt
     1441 ttaagtcttt agcccttttt tcaacacaag gacaatttct acctgtaata atagcaactt
     1501 ttttaccaag ctttaaccaa gcctcaatag ctgctccatc ttttacatca aattctttga
     1561 taaattctcc atttgaagta taaataatct ttccatcagt taaacaacca tctacatcta
     1621 aaaaaatcaa ttctgtcaca acttcttact ctcttacaac aaatgcgcct gcaaatgcac
     1681 cacttgcagc aaaatctctt gcttcatctt cacttctaaa gcctgttaag aaaacacggt
     1741 ttaatccatc tatcgaactt gtgcgtatag tagaactata agttctataa gttttatatc
     1801 ttgctgctat cgtttgcgct ccggctggat ttttgaaggc tccaatttga accatgaaat
     1861 ttccaccttc ataaatttga ccattattta caatttctcc attgtttcca tagtttacat
     1921 tagaatgtac aatattatta cccgaattac ttgatccaaa tcctataact tcaagtctta
     1981 ctggagctgt tcctgaagta atcatatcga tttgactcgc agctcctttt gataaatcta
     2041 taatacgatt attcacaaaa ggacctctat cattaacacg aacagtaact tgacgattgt
     2101 tatttaagtt ggttactttt aaaatggtat tcataggtaa agttttatgt gctgcggtta
     2161 aaccattttg atcataggtt tcaccattag aagttttttt accatgaaaa cctggaccat
     2221 accaactcgc aataccatca gcactctctc ctactgccac aacagtagga taataagttt
     2281 taccattgat agtataaggc ttcatcgtcc ctttagttcc tgaagaacta ggactgcttt
     2341 taaaatcatt tgaaggataa tacacttgag cattatccat actagaaaaa aaactagtgc
     2401 ctaaacaacc actaaaaaac aaaccccata aactaacggc tgacaacttt agtgtaattg
     2461 tttttatttg catttttatt ctccttaatt ggtataatta atttttgatt aatactaaga
     2521 tgatttcttg ctattttgtt aaattcgcga atttcatcaa cgcttatatt atattttttt
     2581 gctatcttat ataaagaatc tccggattta acagtataag ttcttgtcat aggtatcgtt
     2641 gtatcaacct ttgcaagttt ttctgcttta aaatttttat caaaaaatgc cactttatta
     2701 agtggtatat acatataata tcctttgcca ggtggtgtaa aattatgttt aaattgtgga
     2761 ttgtattttt taaaagttac aagatccata tttaaatttt tagctatttc ttttaaagat
     2821 gcagaggaag gcacatcaac ttttgcaaat tcattgctta aagcataatt cattaaagac
     2881 gcatctttat ctactaaaaa atctctatcg ttggctaaaa aagcgagtgt taaaatcttt
     2941 cttataaaat ttctagtttc taaagaaaga tattttttat taggatccaa taaaacgctt
     3001 aaatcatcac ttcttgcttg cttaatagct tgtcttaatt tgccatttcc acaattataa
     3061 gccaaaagcg ctaaatacca tttaccaaat tcttctttta attcttttaa ataatttgta
     3121 gccgcataag ttgacttaac cggatcacgt ctttcatcaa cataagcatc aattcttaaa
     3181 cctaaatttc tagctgttgg ttgcataaat tgccaaaccc ctacagcctt agcattagaa
     3241 acactatggg ttttcaatcc tgattcaacc atggctaaat ataaaatttc tccaggaact
     3301 ccttgttgat ctagaatttt ccttatcata ggagtaactt ttgaaaaatt ttgcatactg
     3361 tctattaaag tttgagtatg ttttgatttt atatcttgtt gagtttgcac aaaaatcaaa
     3421 tcactgataa aacttggatt aatatctaaa tttcttaaaa cattcatttg tctttcataa
     3481 aattcaggag tgttaatttg tgcaaaaaga aaattaaaac atattaaaaa ataaaataaa
     3541 acttttttca ttaatagcct ttaaaaaata atttttcaga attactaaaa caaatttcta
     3601 gaagttcttt tcttgataaa ttcagtactt cacacatttt atttgctaca aattgactca
     3661 gtaagggttc atttctttta ccacgataag gttctggagt aagatatgga gcatcagttt
     3721 caagcagcaa tctatctttt ggaattttag gtaaaatttc aactaatttt ttagcatttt
     3781 taaaagttaa aacccctcca ataccaaaat aaaacccctc ttcaaaaaga gctaacaaat
     3841 gctcacttgc attaaagcaa tgcaaaactc ctcctactaa atccttagaa tactcatgca
     3901 aaatctcata agcatcatga tttgcctctc ttgaatgaat aataacaggt tttttaaatt
     3961 caatagcaag ttcaagttgc gcaataaaaa tctttttttg attttctttt tctttttgaa
     4021 tttcttcagc aaactcactt ttaaaacgaa aataatcaag cccacattca ccgacagcta
     4081 cacacttttc attgcataaa tactgcctta aaatttcctc atcataacca tcgatttcat
     4141 aaggatgcac ccctgctgca aaaaaaatgt ttttatattt atgagcgatt gtagctgcgt
     4201 aaggcaaatc ttttatatca gcaccaggta tgatgatctt ctctatgcca tttttaaaag
     4261 cacgatttaa agtctcatcc aaatcatctt taaatgcttc actatctaga tggcaatgcg
     4321 tatcaataat tcttaaacca tcttgaaaat caagatttaa gaacatactt caactctgtc
     4381 cttgccatta tcttttgcct gagacaatat tttacttgct ttatccacta aagaatcaat
     4441 cttatctcca ctttttccaa aaaccacacc tatagaagct gtaaaaaaga cttcatctaa
     4501 attaaccaaa acaccaactt tttttatatt tactcgtata cgagaaaaga ttttaattgc
     4561 tctttcttga gatatatttt taagcaaaat gcaaattttt tctgcactat atctacccac
     4621 aagatctctt cctttggttt cattaactat ttcattggcg caaattttaa tcacttcatc
     4681 gccaacccca tggccgtatt catcgttaat catttgaaga ttatctacat ctaagaaagc
     4741 aaaggcaaat tcctcatctt ttgttgctat ttcattaaaa taatcatcta ttccattaat
     4801 taaagcgtta taatttttaa ctccggatac aggatctaaa atattataag tacttaaaat
     4861 ttttttatca tccatataag ataagcaacg atctaagcga caattaaagc tttctttact
     4921 taaaggttta aataaatatt cattaacgcc atttttaaaa gagtttgctt caaatgaatc
     4981 attatgatct cccaaaagaa tcacacctag ttcatcatca ctaaaacgct ctcttacttg
     5041 agttaaaagt tcaaaaccac taattactgg catgttaaca tctgctacga taagcttaac
     5101 atcattatta tcatttaaat aactcatcgc ctcttcccca tgagctgctg ctaaaacatt
     5161 aaattgtctt tgagtaagta tttttttaat ttcattacgc tcagatagtt tactcatagc
     5221 tagaatcact ttagtttttg catactgatt aagtttcata atagaaccaa taatatcatc
     5281 aatacaagtt tcactctctt taaaaatata atctagtata tctttatcca taaatttttc
     5341 tttagtggcc ttatcattac tagccgtaag aacaatagcg ggaattttct tttctataac
     5401 ataatctaca acttcaccat ttggagcgtc cggtaaacat aaatccacaa aagccaaaaa
     5461 ataatcatta ttcattaatt ctttagtttc agcaaaacca aaagcaatat ccacctcata
     5521 atccaaagtc atttgaattt tcttagctaa aagtttacca agcattttgt tatcatcaat
     5581 aattaaaatt tttttactca tagtgcaaca accttaatct aaaaaatttt taatatttct
     5641 cttcaaagaa aagaaatttt catagttaca caattttaac atagcaaaat aaaaaatccg
     5701 cttaattctt aaacaaagtt ttagcaaact ctattgcttc atcgctaaca agctccccac
     5761 tcaccattct agcaagctct ttaattcttt cttcttgatt aagcttctta accttgcttt
     5821 cttcaccatt tttttcaacc aaaaaatgat tgtgtgcttt agaagaaact tgaggcaaat
     5881 gagaaatggc aaaaatttga taaaacctag atagctcttc taaaacctta gctatactca
     5941 tagcttcttt tccgcttaaa tttgaatcaa tttcatctaa aaatagtatc cctttacctg
     6001 cgtttaaaat tttgcattct gtagctataa aagcgagtct taagcgattt aattcacccg
     6061 aacttaagtt ttttaaatta gctaaattaa tatctaacat tacttcatct ttacctaaaa
     6121 ttgaaatttt ttcattttct ttaagtgtta aatttgcatc tttcatataa agatttttaa
     6181 gataatcatt taggtatttt tctaattttt
//
LOCUS       DAPWAA010000086         5784 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.086, whole genome shotgun sequence.
ACCESSION   DAPWAA010000086 DAPWAA010000000
VERSION     DAPWAA010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5784
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.086"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..169
                     /locus_tag="RTF91_001595"
     CDS             <1..169
                     /locus_tag="RTF91_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4944455.1"
                     /translation="VIALRSRKSDVFIRVSCMDKILEFALEKEEFLKSDLKLYKEISL
                     YFYEDAICFLN"
     gene            307..2280
                     /gene="acs"
                     /locus_tag="RTF91_001596"
     CDS             307..2280
                     /gene="acs"
                     /locus_tag="RTF91_001596"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HDZ4944456.1"
                     /translation="MLNQNDQELFKPSKEFSHNARIKNLCEYYDLCHEAKEDFEGFWK
                     RQALKKIEWFSPFSRVLNEDKAPFYKWFEGGTLNVSYQCLDRHMKTRRNKAALIFEGE
                     MGDYEVYTYRRLLHETCKTANLLKKFGVKKGDRVIIYMPMIPETAIVMLACARIGAIH
                     SVVFGGFSPEALRDRIIDAGAKLVVTADGAFRRGKPYMLKPAVDRALSEGCESVEKVL
                     IVIRNNEPIEYVKGRDYVYNELVKNESYKCEPEIMNSEDLLFLLYTSGSTGKPKGVMH
                     ASAGYILWAQMTMEWVFDIKDYDNYWCSADVGWITGHTYVVYGPLACGATTIMHEGTP
                     TYPNSGRWWRMIEEYQVSKFYTSPTAIRMLYADAPDEPKKYDLSMLEVLGTVGEPINP
                     SAWKWFYDEIGGMKSPIVDTWWQTETGGHMITPLPGATPLKPGCATLPLPGIFAEVID
                     EEGNQKDEGEDGLLCIVKPWPSMIRGIWGNDERYIESYFSQAKKDGKPVYFSGDGAFY
                     DKNGYITIIGRTDDVVNVAGHRIGTAEIESAIAKHPSVAESAIVSILDTIKGESLFAF
                     VVLSPASSCDLGAAIETLKELNDILKMEIGPIAKIEKILYTPGLPKTRSGKIMRRILR
                     TIARGEEIKQDISTLEDSGVVETIVKLAKAEFE"
     gene            2362..3186
                     /gene="galU"
                     /locus_tag="RTF91_001597"
     CDS             2362..3186
                     /gene="galU"
                     /locus_tag="RTF91_001597"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDZ4944457.1"
                     /translation="MLQTCIFPAAGYGTRFLPATKALPKEMLPILTKPLIHYGVDEAL
                     EAGMENMGFVTGRGKRALEDYFDISYELEHQISGTKKEYLLDEIRSLINHCTFTFTRQ
                     NQMKGLGDAVLKGRPLVGDEAFGVILADDLCVNEEGLNIMAQMVKIYEKYRCTIIAVM
                     EVPKEQVSSYGVISGNFVEDNLIMVNSMIEKPSPQEAPSNLAIIGRYILTPDIFGILE
                     NTKAGKNGEIQLTDALLTQATNGMVLAYKFQGKRFDCGSVEGFVEATNYFYEKSKC"
     gene            3180..4400
                     /locus_tag="RTF91_001598"
     CDS             3180..4400
                     /locus_tag="RTF91_001598"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDZ4944458.1"
                     /translation="MLNNTLFFKQSEIYTISSYVNRINDEVKSGDIGYYHLIDTSLAL
                     IDESLFFIQDKEYIKNIVLIGMGGSSCGVKALRDMLFNEKNNSRELFILDNTSSHSFN
                     KTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIENFKLDMQKLKKYFVFITDKDSKLH
                     KEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKVCFEDFFTRKK
                     DEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIA
                     LIGARDQHSFLQLIMDGPKNKTVTFLKIKDSQKAPIIPDIHFKFLDSLSNKVNLHELL
                     NAQCDATMHALIAENLSIDVIELEKLDAWHAGYLMYYYELFTSTCGVMLGINTYDQPG
                     VEVGKLILKNILNS"
     gene            4484..4933
                     /locus_tag="RTF91_001599"
     CDS             4484..4933
                     /locus_tag="RTF91_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDZ4944459.1"
                     /translation="MSVIKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAY
                     EEMAELFDSCAERVLQLGDKAITCQKVLMENAKSPKVEKDCFTPLEVVELIKQDYEYL
                     LAEFKKLNEVAEKENDTTTADFAQENIAKYEKSLWMIGATLQSACKM"
     gene            5015..>5784
                     /locus_tag="RTF91_001600"
     CDS             5015..>5784
                     /locus_tag="RTF91_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ4944460.1"
                     /translation="MKVLNFFYENHPKFEVGYERKIQISKPNIIVKGPQFCGKKTLIF
                     NFLSQFKTNEILFLDLYDTRFEKQSLEKIPDFLNENLQIKILCLYNLDFIPNLERVKI
                     PIILSTNIKDLRINGFKELELDYFDFEEFISVSKKNLPVNHLVGLFLQSGRSKFGEKN
                     TLLRQNFTLLELEILKYLSLNLGQQISISKIFIELKKRLKTSKDSVYQAIKRLENTYV
                     IYTLKHDEKKLQKIYFRDFGLRNNLCISKDFSHLFENLV"
BASE COUNT         2101 a          720 c         1055 g         1908 t
ORIGIN      
        1 tgttatagca cttagaagta gaaaaagtga tgtttttata agagtaagtt gtatggataa
       61 aattttagaa tttgcattag aaaaagaaga atttttaaaa tctgatttaa aattatacaa
      121 agagatcagt ctttattttt atgaagatgc aatatgtttc ttaaattaac acgcattata
      181 aaatttaaat aaaatattac aaatattccc attttttata aaatttatct taattatttt
      241 ttaaatttgt atttaatata aataaactct tatataattt taaaaataac taaaaaagga
      301 gtttttatgc ttaatcaaaa tgatcaagag ctttttaagc caagtaaaga attttctcac
      361 aatgcccgta taaaaaattt atgtgaatac tatgatttgt gccatgaagc taaggaggat
      421 tttgaaggtt tttggaaaag acaagcactt aagaagattg agtggttttc acctttttca
      481 agagtgttaa atgaggataa agctccgttt tataaatggt ttgaaggtgg aactttaaat
      541 gtaagctatc aatgcctcga tcgtcatatg aaaacaagac gcaataaagc cgctttgatt
      601 tttgaaggcg aaatggggga ttatgaagtt tatacttata gaagattgct gcatgaaact
      661 tgcaaaacag ctaacttact taaaaaattc ggagtaaaaa aaggcgatag agttataatt
      721 tatatgccta tgattccaga gacggctata gtgatgttag cttgtgcaag gattggagct
      781 atccatagtg tggtatttgg aggattttct ccagaagctt tacgagatag aattatagat
      841 gcaggagcta aacttgtagt aacggccgat ggtgcttttc gtcgtggcaa gccttatatg
      901 ttaaagccag cagtagatag ggctttaagc gaagggtgtg aaagtgtaga aaaggtgctt
      961 atagttatac gtaataacga gcctatagaa tatgttaaag gaagggatta tgtttataat
     1021 gagcttgtga aaaatgaatc ttataagtgt gaacctgaaa tcatgaatag tgaggatttg
     1081 ttatttttac tttacacttc aggatcaaca ggcaaaccaa aaggagttat gcacgcaagt
     1141 gcaggatata tactttgggc acaaatgacc atggaatggg tttttgatat taaagattat
     1201 gataattatt ggtgtagcgc tgatgtgggt tggattacag gtcatactta tgtagtttat
     1261 ggacctttgg catgtggagc aacgactata atgcatgaag gaactcctac ctatccaaat
     1321 tctgggcgtt ggtggagaat gatagaagag tatcaagtga gcaaatttta tacctcccca
     1381 actgctatac gaatgcttta tgctgatgct cctgatgaac caaaaaaata tgatttaagc
     1441 atgcttgaag tacttggaac agttggagag cctatcaatc ctagtgcttg gaagtggttt
     1501 tacgatgaaa taggtggaat gaaaagtcct atagttgata cttggtggca aactgaaaca
     1561 ggtggacata tgatcacacc tctaccagga gctactcctt taaaaccagg ttgtgctact
     1621 ttacctttgc caggaatttt tgcagaagtt attgatgaag aaggtaatca aaaagatgag
     1681 ggcgaagatg gattgctttg tattgttaag ccttggcctt caatgattcg tggaatttgg
     1741 ggtaatgatg aacgctatat agaaagttat ttttctcagg ctaaaaaaga tggaaaacct
     1801 gtatatttta gcggtgatgg tgctttttat gataaaaatg gctatattac tattatagga
     1861 agaacagatg atgtagttaa tgttgcagga caccgtatag gaacagctga aattgaaagt
     1921 gccattgcta agcatccaag cgtagcagaa tcagctatag taagtatttt ggatacgatt
     1981 aaaggtgagt cgttatttgc ttttgtagtt ttaagtcctg catcaagttg tgatttgggt
     2041 gcagctatag aaaccttaaa agaattgaat gatattttaa agatggaaat tggacctata
     2101 gctaaaatag aaaaaattct ttatacccca ggtttgccaa aaactagaag tggtaaaata
     2161 atgagaagaa ttttaagaac tatagcaaga ggtgaagaga tcaaacaaga tatttcaaca
     2221 cttgaagatt ctggagtggt agaaactatt gttaaattag ctaaagcaga gtttgaatga
     2281 taaggtaaaa gaaactttgt cttgttccgt gaaaattcat aaaaataagc tataatgaca
     2341 aaaaaataaa aggaaatttt tatgcttcaa acttgtattt tccctgcggc aggttatggg
     2401 acgagatttt tacctgcaac aaaagcttta cctaaagaaa tgctacccat tttaaccaag
     2461 cctttaatcc actatggcgt tgatgaagct ttagaagcag gaatggaaaa tatgggcttt
     2521 gtaacaggac gtggaaaaag agctttggag gattattttg atatttctta tgaacttgag
     2581 catcaaattt caggcacaaa aaaagaatac ttgcttgatg aaattcgttc tttaatcaat
     2641 cattgcactt ttacttttac aagacaaaat caaatgaaag gcttaggtga tgcggtttta
     2701 aaaggtagac ctttagtcgg tgatgaagct tttggcgtga ttttggctga tgatttgtgc
     2761 gtcaatgaag agggcttaaa tattatggct caaatggtaa aaatttatga aaaatatcgc
     2821 tgtacaatta tagctgttat ggaagtacct aaagaacaag tttcaagtta tggggtgatt
     2881 tctggaaatt ttgtagaaga taatcttatt atggttaatt ctatgataga aaaaccaagt
     2941 ccccaagaag ctccaagtaa tcttgctatc ataggaagat atatcttaac tcctgatatt
     3001 tttggaattt tagaaaatac taaagcagga aaaaatggtg aaattcagct cacagacgca
     3061 cttttaactc aagcaactaa tggtatggtt ttagcttata aatttcaagg aaaacgcttt
     3121 gattgtggaa gtgtagaagg ctttgtagaa gcgacaaatt atttttacga gaagagtaaa
     3181 tgttaaataa tacacttttt tttaaacaaa gtgaaattta caccataagc tcttatgtaa
     3241 accgtattaa tgatgaagta aaaagtggag atataggata ttatcatctt attgatacaa
     3301 gtttagcttt aattgatgaa agcttatttt ttattcaaga taaagaatat ataaaaaata
     3361 ttgttttaat aggaatgggc ggttcaagtt gtggtgtaaa agctttgcgt gatatgcttt
     3421 ttaatgaaaa aaataattca agagaacttt tcatacttga taatacaagt tcacattctt
     3481 ttaataaaac cttagaaaaa atcaaacttg aagaaagttt atttttaatc atcagtaaaa
     3541 caggtagtac tatagaagta gtatcgcttt ttaaactcct tatcgagaat tttaaactcg
     3601 atatgcaaaa attaaaaaaa tactttgttt tcattactga taaagattca aagctacaca
     3661 aagaaggtga aaatttaggc attaaatgct tttttatccc tgcaaatgta ggcggacgtt
     3721 ttagcatact ttcagctgtt ggtatagttc cgctttgttt ttgtggctat aatgctaaag
     3781 ctcttttaga gggagctaaa gtgtgttttg aagatttttt tactcgcaaa aaagatgaaa
     3841 ttttacaaaa ggcttatcat tattgtacac ataaaaatgc caatatcaac gtactttttt
     3901 catatagtga tgcttttaaa ggttttaatg aatggtatat tcagctcatt gctgaaagtt
     3961 taggtaaaaa acaaggctat aaacgcatag gtctaactcc tattgcactc attggtgcaa
     4021 gagatcaaca tagtttttta caactcatca tggatggacc taaaaacaaa actgtaactt
     4081 ttttaaaaat caaagacagt caaaaagcac ctattatccc tgatatccat tttaaatttt
     4141 tagattcttt aagcaataaa gtcaatctcc atgagctttt aaacgcacaa tgtgatgcaa
     4201 ccatgcacgc tttaatcgct gaaaatttaa gtatcgatgt tatagagctt gaaaaacttg
     4261 atgcttggca tgcgggatat ttgatgtatt attatgagct ttttacttca acttgcggtg
     4321 ttatgctagg aattaatacc tatgatcaac ctggcgtgga agttggaaaa ttgatcttaa
     4381 aaaatatatt aaattcttaa tcaaaattct tttaaaaaag agtataataa tttaattaaa
     4441 atttttatgt tataatttta aaaattaaaa aaaggagtca atcatgtcag ttataaaaca
     4501 attattacaa atgcaagcag acgctcatca tttatgggtt aaatttcata attatcattg
     4561 gaatgtaaaa ggtttgcaat ttttttctat acacgaatac acagaaaaag cttatgaaga
     4621 aatggcagag ctttttgata gttgtgctga aagagtttta caacttggtg acaaagctat
     4681 aacttgccaa aaagttttaa tggagaatgc aaaaagccca aaagttgaaa aagattgctt
     4741 tactccactt gaagtggtag aactgatcaa acaagattac gaatatcttc tagcggaatt
     4801 taaaaaactt aacgaagtag cagaaaaaga aaacgatact acaacagctg attttgcaca
     4861 agaaaatatt gcaaaatacg aaaaaagtct ttggatgata ggtgctactt tgcaaagtgc
     4921 ttgcaaaatg taatttaaag ggctttatgc cctatctttt atttttaaaa ttacataaac
     4981 tagactctat aatatccttt tttaaaggat aagattgaaa gtacttaatt ttttttatga
     5041 aaaccatcct aaatttgaag taggctatga aagaaaaatt caaatttcaa agccaaatat
     5101 tattgtaaaa ggcccacaat tttgtggcaa aaaaacactt atttttaatt ttttatctca
     5161 atttaaaaca aatgaaattt tatttttaga tttgtatgat acacgctttg aaaagcaaag
     5221 tttagaaaag attcctgatt ttttgaatga aaatttacaa attaaaattc tttgccttta
     5281 taatttagat tttatcccta atttagaaag ggttaaaatt cccatcattt taagtacaaa
     5341 tataaaagat ttgcgtataa atgggtttaa agaacttgag cttgattatt ttgattttga
     5401 agaatttatc agtgtgagta agaagaattt acctgtaaat catttagtag ggcttttttt
     5461 acaaagtgga cgcagtaaat ttggagaaaa aaatacactt ctaagacaaa attttactct
     5521 tttagaatta gaaattttaa agtatttatc cttaaattta ggccagcaaa ttagtatttc
     5581 taagatattt atagaactca aaaaaagatt aaaaacttca aaagatagtg tttatcaagc
     5641 tataaaaaga ttagaaaata cttatgtgat ttatacttta aagcatgatg aaaaaaaact
     5701 tcaaaagatt tattttagag attttggttt aagaaacaat ctttgtatct caaaggattt
     5761 ttcacattta tttgaaaatt tggt
//
LOCUS       DAPWAA010000087         5707 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.087, whole genome shotgun sequence.
ACCESSION   DAPWAA010000087 DAPWAA010000000
VERSION     DAPWAA010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5707
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.087"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(1..2129)
                     /locus_tag="RTF91_001601"
                     /pseudo
     CDS             complement(1..2129)
                     /locus_tag="RTF91_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002904025.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
     gene            complement(2230..2982)
                     /gene="peb3"
                     /locus_tag="RTF91_001602"
     CDS             complement(2230..2982)
                     /gene="peb3"
                     /locus_tag="RTF91_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family glycoprotein adhesin PEB3"
                     /protein_id="HDZ4944461.1"
                     /translation="MKKIISLFGACALAFSMANADINLYGPGGPHTALKDIASKYSEK
                     TGIKVNVNFGPQATWLEKAKKDADILFGASDQSALAIANDFGKDFNVSKIKPLYFREA
                     IILTQKGNPLKIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNF
                     RNNIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVV
                     AKEGASKETQDFITYLSSKEAKEIFKKYGWRE"
     gene            3951..4730
                     /gene="surE"
                     /locus_tag="RTF91_001603"
     CDS             3951..4730
                     /gene="surE"
                     /locus_tag="RTF91_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDZ4944462.1"
                     /translation="MKEILITNDDGYESEGLKKLVKMLKKEFKAKITIVAPASEKSAC
                     SHSITLTKPLRFVKVGKRFYKLDDGTPADCIYLALHALYKTRLPDLVISGINKGANVG
                     EDITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDYKNALKITKKIVQNIFDKGFP
                     LEKKEFLNINFPEKSKIKGIKICKAGKRVYNFKAHSNINPRGIEYYWLAAANLDFEDE
                     KDSDIALLKKGYTTITPIMLDLTAYEKMKKVKKWLLKANNE"
     gene            4720..5379
                     /locus_tag="RTF91_001604"
     CDS             4720..5379
                     /locus_tag="RTF91_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HDZ4944463.1"
                     /translation="MMNDRFTRVKWLVGEEKFQKILQTKVLVCGLGGVGGICVDALYR
                     SGFQNFTLIDADKFEITNQNRQIHSENIGEEKAKVFERIYKVKGIVSKIDEDFLKNFD
                     LSGFDLIIDAIDDIPAKVALAHLIDFKKQIFISSTGGARKLDPTRIKITSIFKTHGDA
                     LAKKFRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLAIRKILDKN
                     S"
     gene            5424..5707
                     /locus_tag="RTF91_001605"
                     /pseudo
     CDS             5424..5707
                     /locus_tag="RTF91_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002883839.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
BASE COUNT         1969 a          807 c          788 g         2143 t
ORIGIN      
        1 atttcttcta tggttttaat ttcttcagtg attatagagt tttgctgagc atcaaaaagt
       61 tttctttgat aatatacgcg ttctttttct atatttaaag tattaaaagc aagtgcgact
      121 tcatttataa tgttttgttc ttttatattt tgataaatta tttgtgcttt tttgttgatt
      181 ttatcccaaa gctctttaaa gtcttttgct aaatgtgttc ttattttgac tttattatct
      241 tgatttttag cattgataat ttgttgatgc gtgttgtttg agctttcttt aaatatattt
      301 aaaaatttgt taaatttatc acccaaaagc tctttaaact cttcattatc ttttatgttt
      361 tcatatatag gagataaaat tttataattg ctttgttctt cattaaaaga gattaatttt
      421 agtcttttta aaagatagat taaatcatta gccaaatcca catttaatag attttcaaga
      481 aagctttttt ctaatgtttg gctatcaaat ctaaaactag aatctaaaac ttctttttgt
      541 aaattttcta tataatcaac ttctcttgcg ctcactaaaa tatcaagata attaatatcg
      601 taaaatttat tgtcatcaaa atctaaataa ttatgcgtga ttcttttacc tttgtcattg
      661 acacatagtc ttaagccacg gcctacttgt tgatgaatgc taatttgtga agaagaattt
      721 gaaagtttag ttaaagtaaa gatatttgga ttatcccagc cttcttgcaa agcccaaacg
      781 ctaaaaataa aacgcaagga agtatcaaat gatattaact tttctttttc ttctaaaatg
      841 atttttacac cttgtgcttc tttctcatct acagtgcctt tatctccact aaaataacct
      901 tgatgaactc ttaagtcacc cttatcatcg aagtcttttt ctaaatattc tcttatattt
      961 tacatctaaa tttagcttta aaatttcttt gcgtttttct ttaataaagc tcttcaaaag
     1021 tatttttaat aaaagcctta tcacctctaa aatctgtaat atttgggata aaaaacaaac
     1081 ttaaagcttt gatacctttt ttaaaaagtt tttcttcttt ttcaaaatgc aaatcaattg
     1141 ctttttctat aagctcttta atctcatcat tgtttaaaac ataactttct tttttctcaa
     1201 tgatagtttt gttattaaaa taagccttat tgtcctttat ttgcgttaaa atggcattat
     1261 ttaaaagaga aagactatct tgtaatttta ttgtttcttc tctttctatt ccatttaaac
     1321 tgtaagtaaa agtggccttt ttatttttgt attcttttag aaaaatatta tttgtattta
     1381 ctcctaaagt atgcactttt acttgtttaa caaggtattc tttaaaagca gagatggaat
     1441 caaggcaata ggtcatattg ctaagcttat attctttttc ttttggaaaa gtcgcaccaa
     1501 agcgaaaata aagtaaattt atttttgaaa aatactcatt aaaagccttt cccttgagta
     1561 aatggggttc atctataata ctgattggct ttaaatcaac aatattttca aaaacacttt
     1621 tgatattaaa aagattttca ttttgtttgt taagcaaatt ggctttttta tcaatagcgc
     1681 tattggttaa gaccagcact gaaagttcat ttttgttttt aatataatga ttaataatcg
     1741 cattttgact tttgctgtct gagtaataat aagcttttaa atatttttga tattctgaat
     1801 aaaaataagt tttttgtaag ttctatattt tgttttacgc tttctaaaat tgcttttcgt
     1861 ggaacaaaaa taataaattt gttttgtttg taaattttat gaagttcaaa aatcaaattt
     1921 aaataagtaa aagtcttgcc tgtgcctgtt tccattaaaa tatccaaatt taatttatca
     1981 cttatatttt gcaccggcat aagtgtagtt ttataaaagt cttttagaca ttcttttaga
     2041 ttatcttgtc ttttaaaatc aaattccttt aaaagagtaa taatattgtc tatacaccta
     2101 acttgatatt cttgtttttc aaaaatcatt tacattttcc gataaaatat ttaaaatatt
     2161 ttatcttatt ttgtcttaat taaaagaagt catagaagaa agacacgcta aaaagcgtgt
     2221 atgtaaggtt tattctctcc agccgtattt tttgaaaatt tctttagctt ctttagaact
     2281 tagataagtg ataaaatctt gtgtttcttt gcttgcacct tctttagcca ccacattaaa
     2341 agttctataa acaaccaaat ctttttctat agctacggca gttcctatgt caggattgct
     2401 ttttgaccaa tcaatccaag tgatccacgc atcggcttga tcttgtgcaa aaagttttct
     2461 tgcacttcca ctgtttggaa caaaagctac gatattgttt ctaaaatttt gtatggtttt
     2521 tatatcttga gttctaccta tcatatcttc ccaaactcct gtcccagaag tattgctctt
     2581 tccggcacct tcaggcacaa caattcttac ttttttattg gctaaatctt ttaaaccttt
     2641 gatttttaaa ggattgcctt tttgagtaag tatgatggct tctctaaaat ataaaggttt
     2701 gattttgcta acattaaaat ctttgccaaa gtcattagct atagccaaag ctgattgatc
     2761 tgaagcgcca aataaaatat ccgcatcttt tttagccttt tcaagccaag ttgcttgagg
     2821 gccaaaattt acattcactt ttatgcctgt tttttcgcta tatttactcg ctatatcttt
     2881 taaggctgta tgtgggccgc ctggtccata aagatttata tccgcatttg ccatactaaa
     2941 agctaaagcg catgcgccaa acaaactgat aatttttttc atagtatttc cttttatgat
     3001 aaattttatt gattttgaag atgagatttt aaaaattata tgttaataaa tagttacaat
     3061 gtaacaaaaa tgttattaaa aacctaactc ttgtttgata tttttataag caagagttaa
     3121 agttgtttat ttcttttggt gttaaaatga cacaaggtag agcaaagtat gcaaaaacac
     3181 aaactaagaa gtatgaccat tctagctgcc ataaaatcca cagcctagct tatagctttt
     3241 gtttcaaagc taactcataa agtcgccaaa ccctacgaaa tatcccactg caaaagcagg
     3301 aaaaacctcc atagtttgaa cacttgctaa aattacaaag ccaaactgta taaagtacat
     3361 aaagactgat gataacttca caagcagtaa aaatataaaa atgattcata tgccaatata
     3421 tttcattaag atcttgccgt gcttacaccc aataatacta ctaaggcaaa accaaaaagt
     3481 gataagagca actatccttc ataattatat gcaagatatt ccaaactgtt gcgtaaattc
     3541 ctgctttttt aggaacagct ttattgttta taacactttg tgatcccatg ggcttaagca
     3601 tagagtatga gttagctaag ggtgatattg tttcacacaa gataatatcc catgtatcta
     3661 taaaaactcc atttaaactc caagttctta ttttgtaata tttagtaaaa tttcttcttt
     3721 aagaaattta atagctttta tcttaggttt gaaaaatcaa acatatttga atcctctttg
     3781 ctaattttta taaattttta tggattaaat aatattaatt gatataaaat aattaaaaat
     3841 aatgttaaaa tttatataat ttgaaattaa aatataaatt agaatttata ctatgaagct
     3901 ttaaaaaaat atgttaaaat ccaaattttt atcttttgca aggaaaagca atgaaagaaa
     3961 ttcttatcac caatgatgat ggttatgaaa gtgaaggact taaaaaactc gttaaaatgt
     4021 taaaaaaaga atttaaagct aagatcacta tagtagctcc tgctagtgaa aagtcagctt
     4081 gttcgcactc tataacttta accaaacctt tgcgttttgt taaagtagga aaaagatttt
     4141 acaaacttga tgatggcacc cctgcagact gcatttatct cgcacttcat gcactttata
     4201 aaacacgttt acctgatctt gtgatcagtg ggattaataa aggagcaaat gtaggcgaag
     4261 atattactta ctcaggaact tgtgcgggtg ctatggaagc agttttacaa ggaattcctg
     4321 ctatcgctct ttctcaattt tacaaaaaaa gtgaaaaaga attagactat aaaaatgctt
     4381 taaaaattac taaaaaaatt gttcaaaaca tttttgataa aggctttcct ttagaaaaaa
     4441 aagaattttt aaatatcaat tttcctgaaa aatcaaaaat caaaggtatt aaaatttgca
     4501 aagcaggtaa aagagtatat aatttcaaag ctcattcaaa tatcaatcct cgtggtatcg
     4561 aatattattg gcttgcggct gcaaatttag actttgaaga tgaaaaggat agtgatattg
     4621 ctttacttaa aaaaggttac actacaataa ctcctataat gctagatctt acagcatatg
     4681 aaaagatgaa aaaagttaaa aaatggttat taaaggcaaa taatgaatga tagatttacg
     4741 cgtgtaaaat ggctagttgg cgaagaaaaa tttcaaaaaa ttttacaaac aaaagttcta
     4801 gtttgcggac ttggtggagt gggtggaatt tgtgttgatg cactttaccg tagtggtttt
     4861 caaaacttta ctttaattga tgcagataaa tttgaaatca ccaatcaaaa tcgccaaatt
     4921 catagtgaaa atataggtga agaaaaagct aaagtatttg aaagaattta taaagttaag
     4981 ggcatagtca gcaaaataga tgaagatttt ttaaaaaatt ttgatttaag tggatttgat
     5041 cttattatcg atgcgattga tgatatccct gcaaaagtag ctttagctca tcttatagat
     5101 tttaaaaaac aaatttttat ttcttcaaca ggtggagcta gaaagcttga tccaacacgc
     5161 attaaaatta caagtatttt taaaactcac ggcgatgctt tagcaaaaaa atttcgctat
     5221 gaacttagaa aatcgggttt taaaggaaat tttgatgtgg ttttttctga tgaagaagcg
     5281 cattgtaaag atttgggttc ttttatggga gtaactgctt cttttggtct agctttagca
     5341 agtttggcaa taagaaaaat actcgataaa aacagttaaa tttcaaaatt ttaaactctt
     5401 gtataaaact ttttaaacaa agcgtgagta agctttgcat taagaatata ctcaagatta
     5461 aattaaagtt tggattaaaa tagataggag acaatgagaa gaaaatttat aaaagatttt
     5521 gtttgtgtct acgaaaaaca aggaaaaatt gtaagtttta taagtttaaa aaagataaaa
     5581 atacttgatt tgctttttgc ttaccctaaa tttacaaggc ttggtttggc taaaaattta
     5641 cttgattttg ctttgaaaga attttatgat tttacctctt taatttcaaa gtttttcttt
     5701 attgaaa
//
LOCUS       DAPWAA010000088         5503 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.088, whole genome shotgun sequence.
ACCESSION   DAPWAA010000088 DAPWAA010000000
VERSION     DAPWAA010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5503
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.088"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            13..2010
                     /locus_tag="RTF91_001606"
     CDS             13..2010
                     /locus_tag="RTF91_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HDZ4944464.1"
                     /translation="MMYKKQNLPELTLRGLILGSILTIIFTASNVYLGLKVGLTFSSS
                     IPAVVISMAVLSLFKTSNILENNMVQTQASAAGTLSSVIFVIPGLFMCGYWSEFPLWQ
                     TFMICLCGGGLGVLFTIPLRRAMVVESKLAYPEGRAAAEILKVVNKDKSSKKGKQGIK
                     EIALGSFIAAIFSLLSNGFKLAASESNFAFIWNKMAFGFSMGYSLALLGAGYLVGLAG
                     AIALFVGMFLAWGVFTPYLSNFEFDSAKDAVDLASSVWSSKVRLIGTGAIAIAALWTL
                     IELLKPVIEGIKEIIKNFKITNQEKNERTDTDLSLKSIFILFILMVIGLFITFYSFVG
                     DANLSIYYQMLFSFVGTLVSILIGFFVAAACGYMAGLVGSSSSPISGIGLIGVIISSI
                     VFLVLGVELFQDPMLSKFAVALAIFTTSVILATAAISNDNLQDLKTGHLVGATPWRQQ
                     VALLIGCIFGALAIVPVLNLLYQAYGFVGAMPREGMDVSSALAAPQANLMSTIAQGIF
                     HHNIEWGYMTFGVFVGILMIILDKILRRTQKMSLPPLAVGIGIYLPPAVNIPLVIGGI
                     LKYIVMQYLTKKYAKNSHKEEKLANCEQRGTLFASGLIVGESIFGVIIAGITVFSVSM
                     GGSESPLVLNLTNFHNSELFALIFFVGVVLYFIKRIVKKDF"
     gene            2086..2889
                     /locus_tag="RTF91_001607"
     CDS             2086..2889
                     /locus_tag="RTF91_001607"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HDZ4944465.1"
                     /translation="MENLYALILGIIEGLTEFLPVSSTGHMILSTTILGIDIDKFWKS
                     FLIIIQLGSILAVIFVFWRKLFQGLDIWFKLAVGFFPTGVIGLFVAKYLNALFNGWVV
                     VFMLIFGGVVFILIELAHKNKQYCINSLEEISFKQAFCIGIFQSLAMIPGTSRSGASI
                     IGGLLLGFNRKVAAEFSFLLAIPTMIIATAYSIYKEPELLSNANSLVPLSIGFITAFI
                     VAVLVVKFFLKFISKFNFIPFGVYRIILGLIFFYLYYSEILNAGSEFKL"
     gene            3021..4829
                     /locus_tag="RTF91_001608"
     CDS             3021..4829
                     /locus_tag="RTF91_001608"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDZ4944466.1"
                     /translation="MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSC
                     AHLMAQAIKNLYPEAKFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELVEAKIV
                     ISKYEITKNEALAKFQNDDLKQEVLSRIPDGTVSIYKQGEFEDLCRGPHVPNTKFLRF
                     FKLTRVAGAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGAELKL
                     FTFDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHY
                     ANYKENMYFTQIDEQEYGIKPMNCVGHIKIYQSNVRSYRDLPLKFFEYGVVHRHEKSG
                     VLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKA
                     IGDDEIWEVATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQV
                     DFNLPNRFKLEYTDSNNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAIG
                     IVPIGEAHIAYAKEIQKELLEFNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEV
                     AKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEVHF"
     gene            4826..5344
                     /locus_tag="RTF91_001609"
     CDS             4826..5344
                     /locus_tag="RTF91_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDZ4944467.1"
                     /translation="MSKEKEVLLNEEIRADEIRCVGDDGKVYGIVSSDEALEIANRLG
                     LDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKIAQNDIN
                     YKIKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEPNFEG
                     RYVNMLVTPKKA"
BASE COUNT         1793 a          667 c         1103 g         1940 t
ORIGIN      
        1 taaaacggag aaatgatgta taaaaaacaa aatttaccag aacttacctt aaggggtttg
       61 attttgggaa gtattttaac tattattttc acagcttcaa atgtatattt ggggttaaaa
      121 gtgggactta ctttttcatc atcaattcca gctgtggtta tttctatggc agttttgagc
      181 ctttttaaga cttcaaatat tttagaaaat aatatggtac aaactcaagc ttcagcagca
      241 ggaactttat cgtcagttat ttttgttatc ccaggacttt ttatgtgtgg atattggagt
      301 gaatttccac tttggcaaac ttttatgata tgtctttgtg gcggtggact tggggtgctt
      361 tttactatac cattaagaag ggctatggta gttgaaagca agcttgctta tcctgaaggt
      421 agggctgcag ctgaaatttt aaaagtagtc aataaggata agagtagtaa aaaaggaaaa
      481 caaggcatta aagaaatagc attaggttct tttatagcgg cgatttttag cttattgagt
      541 aatggtttta aacttgctgc aagtgagagt aattttgctt ttatttggaa taaaatggct
      601 tttggttttt ctatgggata ttctttagca cttttgggag caggctattt agtgggttta
      661 gcaggtgcta tagctctttt tgtgggtatg tttttagctt ggggtgtttt tactccttat
      721 ctttcaaatt ttgaatttga tagtgcgaaa gatgctgtag atttggcttc tagcgtatgg
      781 agttctaaag taagacttat aggaacagga gctattgcta tagcagcact ttggacttta
      841 atagagcttt taaaacctgt tattgaaggt attaaagaaa ttattaaaaa ttttaaaatt
      901 accaatcaag aaaaaaatga aagaaccgat acagatcttt ctttaaaaag tatttttata
      961 ctttttattt taatggttat tggtttattt attacttttt atagttttgt cggagatgct
     1021 aatttaagca tttattatca aatgctattt tcatttgttg gaactttggt ttctatttta
     1081 ataggttttt ttgttgcagc agcttgtgga tatatggcag gacttgtagg atcttcttcc
     1141 agtcctattt ctggaattgg acttattggt gtcattattt cttctattgt gtttttggtt
     1201 ttaggagtag aactttttca agatcctatg ctttctaaat ttgcagtagc attagctatt
     1261 tttactacta gtgttatttt agctacagct gctatttcaa atgataattt acaagattta
     1321 aagacaggac atttagtcgg agctactcct tggagacaac aagttgcttt gcttataggc
     1381 tgtatttttg gagctttagc tatagttcct gttttaaatt tgctttatca agcttatggt
     1441 tttgttggag caatgccaag agagggtatg gatgtttcat cggctttagc agcaccgcaa
     1501 gcaaatttaa tgagtactat tgctcaaggc atttttcatc ataacattga gtggggttat
     1561 atgacttttg gtgtatttgt aggaatttta atgatcattt tagataaaat tttaagaaga
     1621 acacagaaaa tgtctttacc tcctttggct gttggaatag gtatttatct tccacctgct
     1681 gtaaacatac ctttagttat aggtgggatt ttaaaatata ttgtaatgca atatttaact
     1741 aaaaaatatg caaaaaattc tcataaagaa gaaaaactcg caaattgtga gcaaagaggt
     1801 acgctttttg cttcaggact catagtaggt gaaagtattt ttggggtaat tatcgcagga
     1861 attactgtgt tttcagtaag tatgggtggt agcgaaagtc ctctagtttt aaatttgaca
     1921 aattttcata acagtgagct ttttgcgctt atcttttttg tgggagttgt tttatatttc
     1981 attaagcgta ttgttaaaaa agacttttaa tttttcaggt taaaatccct atttaatcca
     2041 ttttgttata attttctttg gtaattattg atcaaggaca taaaaatgga aaatttatat
     2101 gctttaatac ttgggattat agaaggtttg actgagtttt tacctgtttc ttcaacaggt
     2161 catatgattt taagtacaac tatcttaggc attgatatag ataagttttg gaaaagtttt
     2221 ttgattatta tccaacttgg ttctatttta gcagtaattt ttgtattttg gcgcaaacta
     2281 tttcaaggac ttgatatttg gtttaaactc gcggttggat ttttccctac cggagttatt
     2341 gggctttttg tagcaaaata tttaaatgct ttatttaatg gttgggtagt tgtttttatg
     2401 ctcatttttg gtggtgttgt gtttatcctt atagaacttg cacacaaaaa taaacaatac
     2461 tgcattaatt ctttagaaga gataagtttt aaacaagctt tttgcatagg aatttttcaa
     2521 tctttggcta tgattcctgg cacttcaaga agcggggcaa gtattattgg cgggcttttg
     2581 ttgggattta atagaaaagt agcagctgaa tttagctttt tacttgctat tccaaccatg
     2641 attattgcta cagcttatag catttataaa gaacctgaac ttcttagtaa tgcaaattct
     2701 ttagttcctt taagtatagg ttttattacc gcttttattg ttgcggtttt ggttgtaaaa
     2761 tttttcttaa aatttatttc taaatttaat tttattcctt ttggagttta tcgtattatt
     2821 ttggggctta ttttctttta tttgtattat agtgagattt taaatgctgg aagtgaattt
     2881 aaactataaa ataaatatta aatttattct aagatttttt taaaaataag ctgaatttca
     2941 aaaataatta agtcttagaa agttaaaatt aggactttat aaacactcac agggtaagtg
     3001 agctacaaag ggttaaaaat atggaaaaag aagttattgc gtatttggac aatgagacga
     3061 tcattgactc tcaaagtgta aaaaatacaa atttgaaaga aatttatttt gataattcta
     3121 aagaaagttt agaagtgatc cgccattctt gcgcacattt gatggcacaa gcgattaaga
     3181 atttgtatcc tgaggcgaaa tttttcgttg gtcctgtgat agaagatgga ttttactatg
     3241 attttcgcgt ggaaagtaag attggtgaag aagatttagt aaaaattgaa aaaaaaatga
     3301 aagaacttgt tgaggcaaaa attgtaattt caaaatatga aattacaaaa aatgaggctt
     3361 tagcaaaatt tcaaaacgat gatttaaagc aagaagtttt gtcgcgtatt cctgatggga
     3421 ctgtaagtat ttataagcaa ggtgaatttg aagatttgtg tcgtggtcct catgtaccaa
     3481 atacgaaatt tttacgcttt tttaaactta ctcgtgttgc aggagcgtat ttaggtggtg
     3541 atgaaaaaag ggaaatgctt actcgaattt atggtactgc ttttgcagac aaagagagtt
     3601 taaaagagta tctaactatt attgaagaag ctaaaaaacg tgatcataga aagcttggag
     3661 cagagcttaa gctttttact tttgatgatg agatcggagg aggacttcct atttggctaa
     3721 gtaatggtgc aagacttaga tctaaacttg aacacatgct ttataaaatt catcgtttgc
     3781 gtggctatga acctgtgcgt ggacctgagc ttttaaaagc ggatgcgtgg aaaatcagcg
     3841 gacattatgc aaactataaa gagaatatgt attttacaca aattgatgaa caagaatatg
     3901 gcatcaagcc tatgaattgt gtagggcata tcaaaattta tcaaagcaat gtgagaagtt
     3961 atcgtgattt acctttgaaa ttttttgaat acggtgtggt gcatcgccat gagaaaagcg
     4021 gggttttaca cggacttttt agggtaagag aattcactca agatgatgca catatttttt
     4081 gtatgccaag tcagattaaa gagcaggttt tagaaatttt agcttttgtg gataatttga
     4141 tgaagctatt tgattttagc tatgaaatgg aaatttcaac taaacctgaa aaagctatag
     4201 gcgatgatga aatttgggaa gtagcaacta aagctttaaa agaggcttta gatgagcaag
     4261 gtttaaaata tggtattgat gaaggtggtg gggcttttta tggtccaaaa attgatatta
     4321 aaattaccga tgctttaaaa agaaaatggc agtgcggaac tatacaggta gattttaatc
     4381 taccaaatcg ttttaaactc gaatacaccg acagtaataa cgagaaaaaa cagcctgtaa
     4441 tgttgcatcg tgcgattttg ggttcttttg aaagatttat aggaatttta accgagcatt
     4501 gtgcaggcga gtttccattt ttcatcgcac caactgcaat tggtatagta ccaataggcg
     4561 aagcgcacat tgcttatgca aaagaaattc aaaaagaatt actagagttt aatatcgaca
     4621 gtgaagtgta tgaaaaaaat gagagtttaa gcaaaaagat tcgcatcgct gaaaaacaaa
     4681 aattgcctat gattttagtt ttgggtgatg atgaggttgc aaagcgtagc gttgctttaa
     4741 gagataggag agctaaagag caaaaaaatc ttagtttaga tgaatttatt aaattagtta
     4801 aggagaaaat gagtgaggta cacttttgag taaagaaaaa gaagtattgc tcaatgaaga
     4861 gataagagcg gatgaaatca gatgtgttgg tgatgatggc aaggtttatg gtattgtcag
     4921 tagtgatgaa gctttagaaa ttgcaaatcg tctaggactt gatcttgtga tgatagctgc
     4981 agatgctaaa ccacctgttt gtaagatcat ggactatggt aaattccgtt atcaacaaga
     5041 aaaaaaacaa aaagaagcaa agaaaaaaca aaaagtgatt gatataaaag aaatcaaact
     5101 ttctgtaaaa atcgctcaaa atgacattaa ttataaaata aaacatgctt tagaattttt
     5161 agagcaaggt aaacatgtga gatttcgcgt gtttttaaaa gggcgtgaaa tggcaactcc
     5221 tgaagcgggt gtagctctac ttgaaaaaat ttggaccatg atagaaaacg aagccaatcg
     5281 tgataaagaa ccaaattttg aaggccgtta tgtcaatatg cttgtaaccc ctaaaaaagc
     5341 ttaatggggt ttttatgcca agacaaactt taatgcaaaa taaaaatcaa catttagcta
     5401 aatcaatatt ctaaaacaga tgatttgaat attgatttag ctatgaattt aacaaagcaa
     5461 tatttagaaa ataggtttgc agtaggaggg gttactaatt tta
//
LOCUS       DAPWAA010000089         5101 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.089, whole genome shotgun sequence.
ACCESSION   DAPWAA010000089 DAPWAA010000000
VERSION     DAPWAA010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5101
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.089"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            12..731
                     /locus_tag="RTF91_001610"
     CDS             12..731
                     /locus_tag="RTF91_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDZ4944468.1"
                     /translation="MNLWDKKAKTYARYQNTLSTIQKQTFEYLQNLKIIFQNKNIIDI
                     GCGTGVWTLHLAKEAKEILALDNAKAMLEILQEDAKKLNLNNIKCENSSFETWMQNHP
                     NAKFDLAFLSMSPALKDEKDYANFLNLAKIKIYLGWADYRKSDFLDPIFKHFNTEFKG
                     FYKQDLENYLLEKNIFFHKIVFNETRKVQRTKEEAIENALWHLNMNKITTSKEILSPF
                     VQNDITETIKSKIKLLIINNL"
     gene            787..1008
                     /locus_tag="RTF91_001611"
     CDS             787..1008
                     /locus_tag="RTF91_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944469.1"
                     /translation="MVKNLIIKFGRLILDAIVAISFIIALLYSVFMMFSIGFLAGLLS
                     LIVSFIALFLSFFVIYLVIDIRDTLVNKA"
     gene            complement(1036..2043)
                     /gene="pyrC"
                     /locus_tag="RTF91_001612"
     CDS             complement(1036..2043)
                     /gene="pyrC"
                     /locus_tag="RTF91_001612"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HDZ4944470.1"
                     /translation="MIVKNPLDMHLHLRDNQMLELIAPLSARDFRAGVIMPNLIPPLC
                     NLEDLKAYKMRIIQSCKDENFTPLMTLFFKNYDEKFLESAKDEIFGIKLYPAGITTNS
                     NGGVSSFDIEYLKPTLKAMSDLDIPLFVHGETNDFVMDRESNFAKIYENLAKHFPRLK
                     IVMEHITTKTLCKLLKDYENLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDK
                     EALCELAFSGYEKAMFGSDSAPHPRDTKECCGCAAGVFSAPVILPALTELFRQNSCEE
                     NLQKFLSNNACKIYDLKFKKDKILTLEKKEWQVPNAYEDKYNQVVPFMAGEVLKFQVK
                     Y"
     gene            complement(2033..2278)
                     /locus_tag="RTF91_001613"
     CDS             complement(2033..2278)
                     /locus_tag="RTF91_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="HDZ4944471.1"
                     /translation="MKFENLMREILGKKRFELLKFLCENADENGFIMVKISELEEKLN
                     QSKPTIIATFKFLEEKKLFKRLKNGFYQLNIGGENDS"
     gene            complement(2275..2631)
                     /locus_tag="RTF91_001614"
     CDS             complement(2275..2631)
                     /locus_tag="RTF91_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDZ4944472.1"
                     /translation="MKPKYHFCNNARYALEGVFALLKNEIAFRIELCIIIPAIILSFF
                     LKVGLVEHLLLVSVLMLILITEALNSAIEACVDLITNEWHEKAKIAKDCASTAVFFSV
                     LLALFVWGFVLYNIYL"
     gene            complement(2628..4166)
                     /locus_tag="RTF91_001615"
     CDS             complement(2628..4166)
                     /locus_tag="RTF91_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HDZ4944473.1"
                     /translation="MFRLTWFWFVFLNSLMITILNFNLFEFVYEKNTQNWFITSVFVL
                     AYFALVHVVCSLLFVKFFTKFFSILFILSSSLSVYFISFYGVLIDSNMIQNVVQTDIK
                     EVKDLLNLKLILFTGLALLLIFYVVKVKIDYYGSFKSHIKIKIINIVSGLIVVCAVLI
                     PLSKTFIPFFRNYSEIRMYNTPFYQIYAVYRYYVRFVKAKSEFKTIANDAYKENNHTK
                     KLLVLVVGETARAVNYSLGGYTKNDTNFYTKKDNVVFFNNFSSCGTATAVSLPCMFSI
                     SKRKNYSDSEFQENVMDILYKTGVDAAWFDNNSGGCKGVCDRLAYKQKLSSGLDENLL
                     PLLKEKLSHLNNQNIIVLHLQGSHGPTYYKRYPSEFKKFIPTCDTNELSKCDSEALIN
                     TYDNTLLYTDYLLSEIIKLLKEQKDYESSLFYLSDHGESLGENNIYLHGMPYAIAPSY
                     QTHIPAIFWSNDEKLMKLAKEHKGLKLSQDNLFSTLLGYFDIKTSVYEPEYDLLNTKL
                     KANP"
     gene            4288..5046
                     /gene="xth"
                     /locus_tag="RTF91_001616"
     CDS             4288..5046
                     /gene="xth"
                     /locus_tag="RTF91_001616"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDZ4944474.1"
                     /translation="MKLLSWNVNGLRAICDKNALDWITKEKIDFIGFQEIKAHEDKFP
                     KKIYEYPFKHMYFNSAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALF
                     NIYFPNGQKDEERLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKA
                     NANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDY
                     FFISQGLQNRLKNAFIREDIFGSDHAPVGIEIDI"
BASE COUNT         1925 a          754 c          670 g         1752 t
ORIGIN      
        1 aaggaaaata tatgaattta tgggataaaa aagctaaaac ttacgcaaga tatcaaaaca
       61 ctttaagcac gatacaaaaa caaacttttg aatatttaca aaatttaaaa atcatttttc
      121 aaaataaaaa cattatagat ataggatgtg gaactggagt ttggacatta catttagcta
      181 aagaagctaa agaaatttta gctctagata atgcaaaagc tatgcttgaa attttacaag
      241 aagatgctaa aaagttaaat cttaataaca taaaatgcga aaattcaagt tttgaaactt
      301 ggatgcaaaa ccaccctaat gctaaatttg atcttgcatt tttaagcatg tctcctgctt
      361 taaaagatga aaaagattat gcaaatttct taaatctagc taaaataaaa atttatcttg
      421 gttgggcaga ttataggaaa agtgattttt tagatccaat ttttaaacat tttaataccg
      481 aatttaaagg tttttataag caagatttag aaaattattt actagagaaa aatatatttt
      541 ttcataaaat tgtttttaat gaaacacgca aagtccaaag aacaaaggaa gaagctatag
      601 aaaatgctct atggcattta aatatgaaca aaatcacaac ttctaaagaa attttaagcc
      661 cttttgttca aaatgatatt accgaaacta taaaatctaa aataaaactc ttaattataa
      721 ataacttata aaaaacatta agcttatatt tattacaatt tcatcgatta ttttaaagga
      781 gttttaatgg ttaaaaattt aatcatcaaa tttggacgct tgattcttga tgcaattgta
      841 gctataagtt ttattatagc tttactttat tctgttttta tgatgtttag cattggattt
      901 ttagctggct tattgtcatt aatagttagt tttatcgctt tatttctaag cttttttgtg
      961 atctatcttg ttatagatat cagagatact cttgtaaata aagcttaaaa atttttcacc
     1021 tttacgggtg gaaaatcaat actttacttg aaattttaaa acctctcctg ccataaaggg
     1081 cacaacttga ttatatttat cttcatacgc atttggcact tgccattctt ttttttctaa
     1141 agttaaaatt ttatcttttt taaattttaa atcataaatt ttacaagcat tattgcttaa
     1201 aaatttttgc agattttctt cacagctatt ttgtctaaac aattcagtta aagcaggtaa
     1261 aattactggg gcactaaaca cacctgcagc acaaccacaa cactctttag tatctcttgg
     1321 atgaggcgca ctatcgcttc cgaacatagc tttttcataa ccactaaaag caagctcaca
     1381 aagagcttct ttatcttcat aacgcttagc tataggtttg caaaaaagat gaggattcat
     1441 tttacctccg ataacatcat ctaaagtgat aattaaatga tgtaaagtaa tggtcgcata
     1501 taaattttca taatctttta aaagtttaca taaagtttta gtggtaatat gctccataac
     1561 gattttaagg cgtggaaaat gtttggctaa attttcataa attttggcaa aattactttc
     1621 tctatccatt acaaaatcat tagtttcacc atgtacaaac aaaggaatat ctaaatcact
     1681 catggccttt aaagtgggtt ttaaatactc tatatcaaag cttgaaactc cgccatttga
     1741 attagtcgta attcctgctg gataaagctt aatgccaaaa atctcatctt tagcactctc
     1801 aagaaatttc tcatcataat ttttaaaaaa aagtgtcatc aaaggagtaa aattttcatc
     1861 tttacaagat tgaattatgc gcattttata agcttttaaa tcttctaaat tacaaagtgg
     1921 cgggattaaa tttggcataa tcacacctgc acgaaaatct cttgcactca aaggtgcaat
     1981 gagttctagc atttgattat ctcttaaatg taaatgcata tctaaaggat ttttaactat
     2041 cattttcgcc tcctatattt agctgataaa atccattttt aagacgctta aaaagttttt
     2101 tttcttctaa aaacttaaaa gtagcgatga tggtaggttt gctttgattt aatttttctt
     2161 caagctcact gattttaacc ataataaaac cattctcatc agcattttcg cataaaaatt
     2221 ttaataattc aaaacgcttt tttcctaaaa tttctcgcat taaattttca aatttcataa
     2281 gtaaatattg tataaaacaa aaccccagac aaaaagagct aaaagcacac taaaaaacac
     2341 cgctgtacta gcacaatcct tagcaatttt tgccttttca tgccactcat tagtaatcaa
     2401 atcaacgcaa gcttcaatag ctgaatttaa agcttctgta attaagataa gcattaaaac
     2461 actcactaac aataaatgct ctacaaggcc aacttttaag aaaaaactaa gaattattgc
     2521 aggaataata atacaaagtt caatcctaaa cgctatttca tttttaagta aggcaaaaac
     2581 cccttctaaa gcatatcttg cgttattaca aaaatgatat ttgggtttca tggatttgcc
     2641 ttgagcttag tatttagcaa atcatactct ggctcataaa cacttgtttt tatatcaaaa
     2701 tatcctaaaa gagtgctaaa aagattatct tgtgaaagtt ttaaaccttt gtgttcttta
     2761 gctaatttca ttaatttttc atcattactc caaaaaatag caggaatatg agtttgataa
     2821 cttggtgcta tagcataagg cataccatgc aaataaatat tattttcacc caaactttct
     2881 ccgtgatctg aaagataaaa taaagaactt tcataatctt tttgttcttt taataatttt
     2941 ataatctcac ttaaaagata atccgtataa agtaaggtat tgtcataagt attgatcaag
     3001 gcttcactat cacattttga aagttcatta gtatcgcaag ttggaataaa ttttttaaac
     3061 tcacttggat agcgtttata ataagttggc ccatgtgaac cttgcaaatg aagaactatg
     3121 atattttgat tattcaaatg acttaatttt tctttaagaa gtgggagtaa attttcatct
     3181 aaaccactag aaagtttttg cttataagcc aatctatcac aaactccttt acaaccacca
     3241 gaattattat caaaccatgc agcatctacg cctgttttat aaagtatatc cataacattt
     3301 tcttgaaatt ctgaatctga ataattttta cgcttagaga tagaaaacat acaaggcaaa
     3361 ctcaccgccg ttgctgttcc acatgatgaa aaattattaa aaaaaactac attgtctttt
     3421 ttcgtataaa aattagtatc atttttagtg tatccaccta aagagtaatt caccgctcta
     3481 gcagtttcac ccactactaa tactaagagt tttttagtat gattattttc tttataagca
     3541 tcgttagcta tagttttaaa ttcagactta gcttttacaa aacgaacata ataacgatat
     3601 acagcataaa tttgataaaa aggagtgtta tacattctta tttcactata gtttctaaaa
     3661 aaaggtatga aagttttact caaaggaatt aagaccgcac aaacaacaat caaacccgat
     3721 actatgttga taattttaat ttttatatga gatttaaagc taccataata atcaattttt
     3781 actttaacaa cataaaaaat caacaacaag gctaaacccg taaacaaaat taactttaaa
     3841 tttaataaat cttttacttc tttgatatct gtttgaacaa cattttgtat catattagaa
     3901 tctataagca ctccataaaa actaataaaa taaacactta aagaagatga caatataaac
     3961 aatatagaga aaaatttagt aaaaaatttc acaaaaagca aagaacaaac cacatgaacg
     4021 agtgcaaaat aagccaaaac aaaaacagaa gttataaacc aattttgagt gtttttttca
     4081 tatacaaact caaataaatt aaaattcaat attgtaatca ttaaagaatt taaaaaaaca
     4141 aaccaaaacc aagttaatct gaacataatc gacctcacct tgcaaattta aggttttaaa
     4201 ttctattgaa tttttttaaa tggattgtag ttttaaatct ttttatgtta tgatttacac
     4261 ttttaatgaa aatttttaag gaaaacaatg aaactacttt catggaatgt aaatggtcta
     4321 agagcgattt gtgataaaaa cgcacttgat tggataacaa aagaaaaaat tgattttata
     4381 ggttttcaag aaatcaaagc acatgaagat aaatttccta aaaaaattta tgaataccct
     4441 tttaagcaca tgtattttaa ctctgctaaa agagcaggat attctggagt aatgagtctt
     4501 tgtaattttg atagtgaagt gaaaaaatgt gaattttttg acgatgaaga aggtagggtt
     4561 ttagaacacc gttttaaaaa tatcgcgctt tttaacatct attttccaaa tggacaaaaa
     4621 gatgaagaac gtttaaattt caaaatgaaa ttttatgcgg attttttggt gtatttagat
     4681 aagcttttaa aagatggatt tgaaattatc atttgcggtg atgtcaatac cgctcataaa
     4741 gaaatcgatc ttacccaccc aaaagccaat gcaaacactt caggcttttt acctatagaa
     4801 agagcttgga tcgatgattt attaaagctt ggttttatag atacttttag agaaattaac
     4861 ggtgaaataa aagaaaaata ctcgtggtgg agctatagaa tgaaagcaag ggaaagaaat
     4921 gtgggatgga ggattgatta ttttttcatt tcacagggtt tacaaaatag acttaaaaac
     4981 gctttcataa gagaggatat ttttggttct gatcacgcac ctgtaggcat agaaatagat
     5041 atttaatatc ccaaaaaaat gggatattat tttttaatta aattttttgc tttttcccaa
     5101 a
//
LOCUS       DAPWAA010000090         4943 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.090, whole genome shotgun sequence.
ACCESSION   DAPWAA010000090 DAPWAA010000000
VERSION     DAPWAA010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4943)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4943)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4943
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.090"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..468
                     /locus_tag="RTF91_001617"
     CDS             <1..468
                     /locus_tag="RTF91_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDZ4944475.1"
                     /translation="LFSVLIFILVVVFVQNYIAQNSSFKGKVIRVIDGDTIEVNHENK
                     PTRIRFFGIDAPELKQSFGKQSKEALSRILNDKQVEIIYKNKDTYGRIVAIVKLNDID
                     VNRFLVSKGYAWADTYYSNAYIKEQENAKKNHLGLWKENNPIEPYKWKKHNKF"
     gene            477..650
                     /locus_tag="RTF91_001618"
     CDS             477..650
                     /locus_tag="RTF91_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944476.1"
                     /translation="MKKCTLMMLLVLGISGCFVNERGISNRFYDDCKEYYDGSGTYHK
                     DCPKNWVDIKMTP"
     gene            complement(651..1229)
                     /locus_tag="RTF91_001619"
     CDS             complement(651..1229)
                     /locus_tag="RTF91_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944477.1"
                     /translation="MAKKDNFEEYAQLEEYASAEDISRVKAELLTCPELNTSLTGTII
                     EIDKNYAKSILITTSEMVADDQALIFDAFIFAAANYVAQASINKEFSVIIGSKCFFYA
                     PLKLGDVLELEAHALFDETSKKRDVKVVGHVKEIKMFEGTIQVVSTDEHIFKLKRPPL
                     STAKPTENQEQDAKINNPEAMAAALLASMGGK"
     gene            complement(1302..2192)
                     /gene="cmoB"
                     /locus_tag="RTF91_001620"
     CDS             complement(1302..2192)
                     /gene="cmoB"
                     /locus_tag="RTF91_001620"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HDZ4944478.1"
                     /translation="MSRIKMQENLLEKQFLNHPLYARIQELKTLDLACNFSLDESVNL
                     STNSQAKNEILTLAKELKPWRKGPFKIDDLFIDTEWQSFIKFNILKPFMSEISQKYVA
                     DIGCNNGYYMFKMLEFNPEKLIGFDPSIKYRLQFELINAIAKTPIKYELLGVEDLPNY
                     VLKFDVIFCLGVIYHRSDPIKMLKDLKAGLNKNGVIFLDTMYIEDKREIALVPNKTYS
                     KIPNIYFIPSINALKNWCERAGFKEFEVLATKKTDENEQRKTEWIDSFSLENFLDPKD
                     KNLTIEGYEAPKRVYVRIKI"
     gene            2616..2990
                     /locus_tag="RTF91_001621"
     CDS             2616..2990
                     /locus_tag="RTF91_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDZ4944479.1"
                     /translation="MKMRVYYEDTDAGGVVYHSNYLKFCERARSEIFFNKKVDIFDVS
                     KGHFLLVKANCNFLKPAKLGDMIEIKTKILEIKNASVEILQEIYKDEFLLFKMELTLA
                     FVKNEKPVRMDTQLRNLFEELF"
     gene            complement(2982..4172)
                     /locus_tag="RTF91_001622"
     CDS             complement(2982..4172)
                     /locus_tag="RTF91_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944480.1"
                     /translation="MKKIFLIFFLSCYLLNAKEQKLVDVKPVENFYPKLSVQECNTNC
                     LFDLLESRLYLSFLSEFADQSNQFLSNVYAKLLNSITDFEKNVQKITSVKLAIIIPEK
                     TIKSYSNTIINSSIAYLLRQRAEIKVKVFLTGTEDSDKIRAALDAAQAQGYQYAIAGF
                     TLKAASELKNYSGNMKIFIPTIHKNNIQISNQNVIFGSIDYDAQISALLDKSNTNVAI
                     FSDGSALSSNLNSRILAQNSNARIYTIEGEKLDFSRLLRSQGGVNNASIFFNTPLIKT
                     ALTSSQLRIYNIHPYVLLSTQINYNPTFLSLTQQGDRENFIIANSINNHDDNLVYLNE
                     IFNQSISYNWIAYATSIGVDYFYTEFLNKKSESLFDEKIKNSQVDYKVRLMQGKQASF
                     EELK"
     gene            complement(4169..4777)
                     /locus_tag="RTF91_001623"
     CDS             complement(4169..4777)
                     /locus_tag="RTF91_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HDZ4944481.1"
                     /translation="MIRSLYYLKAMGFNFVDTHINNFEQTQNFEELKQLVSSCTLCQF
                     SKTRKFSLIEPKMKNAKLLILDVFGQRSENDSGILLNSKKGEKLKYYIHQILGLRDED
                     FYFSYLFKCFCNGKFDDFSLQSCLPFFWNELKLIQPAFLLCLGEYTFKSLGFQDYHIL
                     KGEVFTYKNFFIMPSYDLDFIEKNPSYKENFIQDLKKIKGFL"
     gene            complement(4774..>4943)
                     /locus_tag="RTF91_001624"
     CDS             complement(4774..>4943)
                     /locus_tag="RTF91_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDZ4944482.1"
                     /translation="LGEICKKENLKRLDWVCLNDNILGVNFYESLNAEHLKQWRNYRL
                     SGENLEKLCDL"
BASE COUNT         1698 a          667 c          728 g         1850 t
ORIGIN      
        1 cttttttctg tattaatttt cattcttgtg gttgtttttg ttcaaaatta tattgctcaa
       61 aattctagtt ttaaaggaaa ggtaattagg gtgattgatg gagatactat agaagtcaat
      121 catgaaaaca aacccactag aataagattt tttggtatag atgcaccaga acttaagcaa
      181 agttttggaa aacaatcaaa agaagcttta agcagaattt taaatgacaa acaggttgaa
      241 atcatttata aaaataaaga tacttatggt agaattgtgg ctattgtaaa gcttaacgat
      301 attgatgtta accgattttt agtgagtaaa ggctatgctt gggctgatac ttactatagt
      361 aatgcttata tcaaagaaca agaaaatgct aagaaaaatc atttaggtct ttggaaagaa
      421 aacaatccta tagagcctta taaatggaaa aagcacaata aattttaagg aaaaacatga
      481 aaaaatgcac tttaatgatg ctattagttt taggaatttc tggatgtttt gtaaatgaaa
      541 gagggatttc aaatcgcttt tacgatgact gtaaagagta ctatgacgga agtggaactt
      601 atcataaaga ttgcccaaaa aattgggtgg atattaaaat gactccttga ttattttcca
      661 cccatagagg ctaataatgc agctgccatg gcttcgggat tgtttatttt ggcatcttgt
      721 tcttgatttt ctgtaggttt agcagtgcta agtggcggac gtttgagttt aaatatatgc
      781 tcatcagtgc taacaacttg tattgttcct tcaaacattt taatttcttt aacatgtcca
      841 actactttta catctctttt tttagaggtt tcatcaaaaa gtgcatgagc ttcaagttct
      901 aaaacatcac ctaatttaag cggggcataa aaaaaacatt ttgatccgat aattactgaa
      961 aattctttat tgatagaagc ttgtgctaca tagtttgctg cggcgaaaat gaaggcatca
     1021 aaaatcaatg cttgatcatc tgctaccatt tcgcttgtgg ttattaaaat cgatttagcg
     1081 tagtttttat cgatttcgat aatagttcca gtaagcgagg tgtttagttc aggacaagtg
     1141 agtaattctg ctttaacacg agatatatct tctgcagatg cgtattcttc aagttgtgcg
     1201 tattcttcga aattatcttt ttttgccata tttaaccttt aaattctact tatctacttc
     1261 aaaatatcta aaaatcaaaa tcggcaaaaa agaaaaagaa tttatatctt aatacgcaca
     1321 taaactcttt taggcgcttc ataaccttca atggtaaggt ttttatcttt tggatctaag
     1381 aaattttcta atgaaaaaga gtctatccat tctgtttttc tttgttcatt ttcatcggtt
     1441 ttttttgtgg ctaaaacttc aaattcttta aatcctgctc tttcacacca gttttttaac
     1501 gcattaatgc ttggtataaa ataaatattt ggaattttag aataagtttt attgggcaca
     1561 agggcgattt ctcttttatc ttctatgtac atagtgtcta aaaaaatcac tccatttttg
     1621 ttaagccctg cttttaaatc ttttaacatt tttataggat cacttctgtg ataaattacg
     1681 ccaagacaga aaatcacatc aaattttaaa acataatttg gcagatcttc tacacctaaa
     1741 agttcatatt ttataggagt tttagcgatt gcattgataa gttcaaattg caaacggtat
     1801 ttaattgatg gatcaaatcc tatgagtttt tcaggattaa attcaagcat tttaaacata
     1861 taataaccat tattgcatcc tatatcagca acatattttt gagaaatttc actcataaaa
     1921 ggttttaaaa tattaaattt aataaaactt tgccattctg tatcaataaa aagatcgtct
     1981 attttaaaag gaccttttct ccatggtttt agttcttttg ctaaggtcaa aatttcattt
     2041 ttagcttgag aatttgtaga taaatttaca ctttcatcta aagaaaaatt acaagcaaga
     2101 tcgagtgttt taagttcttg aattctagcg tataagggat gatttagaaa ttgtttttcg
     2161 agtaaattct cttgcatttt tatccttgac attcgctttt aatgttataa ttataacatt
     2221 aaaagctttt aagattagca agtatgagtt aagattatgt ttaaaaatta aaactttccg
     2281 aataaaccaa aattctaaag cttgtttgta tttaaatttc ttaccctaag tagtttaatt
     2341 ttttcatgaa tttcaaaagg cacatcatac gtttgctcta cgcattcatg tataaagata
     2401 aactgtattt tcatcatctt tggaagctaa agaacatctt ctattgctta actttatatc
     2461 ttcataaagt catttttaga aactgtgtaa agtttttctt taaattgata gtattattta
     2521 aagttggtat aaatttaaaa agcgatatca aagaatttcc attgtataat ctaatgtttt
     2581 taaacaataa atttattatt ttttaaggtt aagcaatgaa aatgcgtgtg tattatgaag
     2641 atactgatgc gggtggagtg gtatatcata gtaattattt aaaattttgc gaaagagcga
     2701 gaagtgaaat tttttttaat aaaaaagtag atatttttga tgtttctaag ggacattttt
     2761 tgcttgtaaa agcaaattgt aattttttaa aacctgcaaa acttggagat atgatagaaa
     2821 ttaaaacaaa aattttagaa ataaaaaatg cttctgtgga aattttacaa gaaatttata
     2881 aagatgaatt tttacttttt aaaatggaat taactttggc ttttgttaaa aacgaaaaac
     2941 cagttagaat ggatacgcaa ttaagaaatc tttttgaaga attattttaa ttcttcaaag
     3001 cttgcttgct taccttgcat aagacgcact ttataatcaa cttgagaatt tttgattttc
     3061 tcatcgaata aactttcact ttttttattt aagaattcgg tataaaagta gtcaacccct
     3121 atgctagtag cataagcaat ccaattataa cttatgcttt gattaaaaat ttcattaaga
     3181 tagactaagt tatcatcatg gttattgata gaattagcaa taatgaaatt ttctctatcc
     3241 ccttgttggg ttaaacttaa aaatgttgga ttatagttaa tttgagtgga taaaagcaca
     3301 taaggatgaa tgttataaat tcttagttga gaacttgtta gagctgtttt aatgagcggg
     3361 gtgttaaaaa atatcgaagc gttattaact cctccttgtg atcttaaaag cctgctaaaa
     3421 tcaagttttt caccttctat agtatatatt ctagcgttgc tattttgagc aagaattctt
     3481 gaatttaaat tacttgataa agcagagcca tcgctaaata ttgcaacatt ggtatttgat
     3541 ttatctaaaa gtgcagaaat ttgagcatca taatcaatac ttccaaaaat aacattttga
     3601 tttgaaattt gtatgttgtt tttatggata gtcggtataa aaattttcat atttcctgag
     3661 tagtttttta actcactagc ggcttttaga gtaaagccag ctatagcata ctgatatcct
     3721 tgagcttgtg ctgcatcaag tgcggctcga attttatcgc tatcttctgt gccggttaaa
     3781 aaaactttta ctttaatttc agctctttgt cttagaagat aagcaatgct tgagtttatt
     3841 atggtgtttg agtagctttt tatggttttt tctgggataa ttatagcaag tttgacagaa
     3901 gtaatttttt gaacattttt ttcaaaatca gtgatggaat ttaataattt tgcataaaca
     3961 ttagataaaa actgattgct ttgatctgca aattcactta aaaaactaag atataatctt
     4021 gattctaaaa ggtcaaaaag acagttcgtg ttgcattctt gaacgctcaa tttaggataa
     4081 aaattttcaa caggttttac atcaactaat ttttgctctt ttgcgttaag caaatagcaa
     4141 gataagaaaa atattaaaaa tatttttttc ataaaaatcc tttaattttt tttaaatctt
     4201 gtatgaaatt ttctttataa cttggatttt tttctataaa atctaaatca taacttggca
     4261 ttatgaaaaa atttttataa gtaaaaactt caccttttaa aatgtgataa tcttgaaatc
     4321 ctaagctttt aaatgtgtat tctcccaggc aaagcaaaaa agcaggttga atcaatttta
     4381 gctcattcca gaaaaatggt aagcaagatt gtagcgaaaa atcatcaaat tttccattac
     4441 aaaaacattt aaatagatag gaaaaataaa aatcttcatc acgaagtcct aaaatttgat
     4501 gtatatagta ttttaatttt tcaccttttt ttgaattaag taaaattcca ctgtcatttt
     4561 cactcctttg cccaaaaaca tcaagaatca gtaacttagc atttttcatc ttaggttcta
     4621 taaggctaaa ttttcttgtt ttggaaaatt ggcataaggt gcaagatgaa acaagttgtt
     4681 ttaattcttc gaaattttgt gtttgttcaa agttgtttat atgtgtatca acaaagttaa
     4741 atcccatggc ttttaaataa taaaggcttc ttatcataaa tcgcacaatt tttctaaatt
     4801 ttctccactt agacgataat ttctccactg tttaagatgc tcagcattta aactttcata
     4861 aaaattaaca cctaaaatat tgtcatttaa acaaacccag tcaagtcttt ttaaattttc
     4921 ttttttacaa atttctccta aaa
//
LOCUS       DAPWAA010000091         4793 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.091, whole genome shotgun sequence.
ACCESSION   DAPWAA010000091 DAPWAA010000000
VERSION     DAPWAA010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4793
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.091"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            55..2643
                     /gene="secA"
                     /locus_tag="RTF91_001625"
     CDS             55..2643
                     /gene="secA"
                     /locus_tag="RTF91_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDZ4944483.1"
                     /translation="MFLNTLKAIFGTKNDREIKKYFKRVAQINALESKYQNLNNDELK
                     AEFAKFKEQILNGEKNENDILNDIFAIVRETGKRTLNMRHFDVQLIGGMVLHDGKIAE
                     MKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVVLS
                     SQNSDLEHKQAYDCDITYGTNNEFGFDYLRDNMKFSKAEKVQREHNFVIVDEVDSILI
                     DEARTPLIISGPTNRTLDGYIKANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRSILIT
                     EAGIAKAEKLFGVENLYSLENAILAHQLDQALKAHNLFEKDVHYVLRNKEVIIVDEFT
                     GRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYNKLAGMTGTAQTEA
                     TEFSQIYSLDVISIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANTKGQPVLVGT
                     ASIERSEVFHNMLVKEKIPHHVLNAKNHEQEALIIQDAGKKGAVTIATNMAGRGVDIK
                     IDDEIRTLGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGD
                     RIKSIMDRLGIEEGESIESRIVTRAVENAQKKVENLHFESRKHLLEYDDVANEQRKTI
                     YRYRNELLDENYDIKAKISQNIAEYSANVMNDYMLDESGSNVNFENLQAKILYECSIQ
                     ISEEDFENLSVIEMQDKLSQILENSYNEKMSRLEIKELHNIERILYLQVLDNAWREHL
                     YQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVQFNQEEAQ
                     NLENKANEKNEKLLENSVEMGASENNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGP
                     KQGILA"
     gene            2640..3845
                     /locus_tag="RTF91_001626"
     CDS             2640..3845
                     /locus_tag="RTF91_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ4944484.1"
                     /translation="MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVA
                     MAIMNGFDKEFEKRFFVMNYPITILPKFYAPVNDEFVDELRKIFPNLLFSPYISTQVV
                     VKADNRFEGGVLFGVNFDDEKKINEVVAKALKDEKLSGFDILVGSALADEFGLYKNDK
                     LSLIFSNLNPSGFSLVPQSKRFNVKARFTSGLAFYDKAYMYTDVNALKKVLGILQNPN
                     YDGIHIYSNNAFKDVEKIKSYLKDDYAVVGWWEQNKNFFSALELEKRALFIVLMLIIL
                     VASLNIVSSLLMIVMNRRSEIALLLALGASKSEIKKSFFALGMLIGGGGMIVGVILAF
                     FALWLLGNFDIVSLPADVYGTSKLPLDLSLMDFSLTIVGALVIIALSSFYPAKKATQI
                     NILDTLRNE"
     gene            3868..4647
                     /locus_tag="RTF91_001627"
     CDS             3868..4647
                     /locus_tag="RTF91_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDZ4944485.1"
                     /translation="MSLFIQKNKNFKPLKPLSKLKIITNLILLILFLILFCYCSFSIS
                     AYHFDFSAIITYKEKFFQGFLNTLMISFFSLLLSIILGGVFCAFSLSSIIFLRFFSIF
                     YIELIRGTPLLVQVLLIYYIIANNLGFDNRYVVGVTILACFSAAYLAEIFRAGILSIS
                     ISQLESARALGLKEIQICTYIIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQ
                     NAQEVNSYTFATLEAYVVLAIAYLVLTLPISILSRYLERKY"
     gene            4714..4789
                     /locus_tag="RTF91_001628"
     tRNA            4714..4789
                     /locus_tag="RTF91_001628"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4747..4749,aa:Lys,seq:ttt)
BASE COUNT         1664 a          563 c          903 g         1663 t
ORIGIN      
        1 tttaattaaa taatcgttat aatggtagtt tgaaaaattt acaaaggttt aaaaatgttt
       61 ttaaatacct taaaagctat ttttggcaca aaaaatgatc gcgaaataaa aaaatacttc
      121 aagcgtgtag cacaaattaa tgctttagaa agcaagtatc aaaatttaaa caatgatgaa
      181 ttaaaggctg aatttgcaaa atttaaagag caaattttaa acggagaaaa gaacgagaat
      241 gatatcttaa atgatatttt tgccatagtt agagaaacgg gcaaaagaac tttaaatatg
      301 cgtcatttcg atgtgcaatt aatcggcggt atggttttac atgatggaaa aatcgcagaa
      361 atgaaaacag gagaaggtaa aactcttgta gcgactttac ctgttgtttt aaatgctatg
      421 agtggcaaag gtgtgcatgt tgttacggtg aatgattatt tagcaaaaag agatgctgaa
      481 caaatgagtg cgatttataa ttttttaggt tttagcgtgg gtgtggtgct ttcttcccaa
      541 aatagcgatt tagaacacaa gcaagcttat gattgtgata ttacttatgg aacaaataat
      601 gaatttggtt ttgactatct gcgtgataat atgaaatttt caaaagctga aaaagttcaa
      661 agggagcata attttgttat tgtggatgag gtggatagta ttttaattga tgaggcaaga
      721 actccactta tcattagtgg tcctacaaat cgtaccttag atggttatat taaagcaaat
      781 gaagtggcta aacaaatgca aaaaggcgaa gcggttttac cacctgcaaa accagagggt
      841 gattttgtgg ttgatgagaa aaaccgtagc attttgatta cagaagcggg tattgcaaag
      901 gctgaaaagc tttttggcgt agaaaattta tatagtctcg agaatgctat tttagctcat
      961 caacttgatc aagctttaaa agcgcacaat ctttttgaga aagatgtgca ttatgttcta
     1021 agaaataaag aagttattat agttgatgaa tttacagggc gtttaagtga agggcgtcgt
     1081 tttagtgagg gactgcatca agccttggaa gctaaagaaa atgtaaaaat tcaagaagaa
     1141 agtcaaactt tagcggatat tacttttcaa aattatttta gaatgtataa caaactcgca
     1201 ggtatgacag gaacagcaca aacagaagcg acagaatttt cacaaattta tagtttagat
     1261 gttatttcta taccaacaaa cattcctatc aaaagacaag ataaagatga tcttatttat
     1321 aaaactcaaa atgaaaaatt taaagctgtg attgaagaga ttaaaaaagc taataccaaa
     1381 ggtcagcccg tgcttgtagg aactgcaagt atagaacgca gtgaggtttt tcataatatg
     1441 cttgtaaaag agaaaatccc tcatcatgtt ttaaatgcta aaaatcacga acaagaagct
     1501 ttaattatcc aagatgcagg taaaaaaggt gctgtaacta ttgctaccaa tatggcaggt
     1561 cgtggtgtgg atatcaaaat cgatgatgag attaggactt tagggggact ttatattatc
     1621 ggtacagaaa ggcatgaaag tcgtcgtatt gacaatcagc ttcgtggtcg tgcaggaaga
     1681 caaggtgatc ctggtataag ccgtttttat ctgagtttgg aagataatct tttaagaatt
     1741 tttggcggag atcgcattaa aagcattatg gatcgtttgg gtatagaaga gggtgaaagt
     1801 atagagtcaa gaatcgttac aagagcagtt gaaaatgcac agaaaaaagt agaaaattta
     1861 cattttgaaa gcaggaagca tttgttagaa tacgatgatg tggcaaatga acaaagaaaa
     1921 actatttatc gttatcgtaa tgagctttta gatgaaaact atgatattaa agctaaaatc
     1981 tcacaaaata ttgctgaata tagtgcaaat gtgatgaatg attatatgct tgatgaaagt
     2041 ggctctaatg taaattttga gaatttacaa gcaaaaattt tatatgaatg ttcaattcag
     2101 attagtgaag aagattttga gaatttaagt gttattgaaa tgcaagataa attaagtcaa
     2161 attcttgaaa attcttacaa tgaaaagatg tcaagactcg agattaaaga attgcacaat
     2221 atagagcgta ttttgtattt acaagttttg gataatgctt ggcgcgagca tttgtatcag
     2281 atggatattt taaaaacagg cataggactt cgtggataca atcaaaaaga tcctcttgta
     2341 gaatacaaaa aagaaagcta taatcttttc ttagagctag tcaatcgcat taaatttgat
     2401 agtattaaat tactttttag cgtacagttt aatcaagaag aagcacaaaa tttggaaaat
     2461 aaagctaatg aaaaaaatga aaaactactt gaaaattcag tagaaatggg tgcgagtgaa
     2521 aataatcttg gtgaagctga atttaaaaaa gttccacgca atgccccttg tccttgtgga
     2581 agtggaaaaa aatttaaaga atgccatgga aaaagtggtc ctaaacaagg gattttagct
     2641 tgaataaaag cgttttaaaa tatttgcttt ttaaatattt aagatttgat aaagaacagc
     2701 cttttattaa tctttctatg cttttagctt ttttaggagt ttgtgtggga ctttgcgttt
     2761 tacttgtagc tatggcaatt atgaatggct ttgataaaga atttgaaaag cgtttttttg
     2821 tgatgaatta tcctattact attttaccta aattttacgc tcctgtaaat gatgaatttg
     2881 tagatgaatt aagaaaaata tttccaaatt tattgtttag tccttatata agtactcaag
     2941 ttgtcgtaaa agcagataat cgttttgaag gtggtgtact ttttggtgtt aattttgacg
     3001 atgaaaaaaa aatcaacgaa gtagttgcta aagctttaaa agatgagaaa ttaagtggtt
     3061 ttgatatact tgtaggatcg gcacttgctg atgaatttgg tttatataaa aatgataaac
     3121 tttctcttat tttttcaaat cttaacccta gtggattttc tttagtgcca caaagcaaac
     3181 gttttaatgt taaagcacgt tttacctctg ggcttgcttt ttatgataaa gcttatatgt
     3241 atacagatgt taatgcatta aaaaaagtac ttggaatact tcaaaatcca aattatgatg
     3301 gaattcatat atatagtaat aatgctttta aggatgtaga aaaaattaaa tcttatttaa
     3361 aagatgatta tgctgtggta ggctggtggg aacaaaataa aaacttcttt tcagctttgg
     3421 agcttgaaaa aagagcactt tttatagttt tgatgcttat tattttggtt gcaagtttaa
     3481 atatagtaag ttctttattg atgatagtca tgaatcgtcg tagtgaaata gcactcttac
     3541 ttgccttagg tgcgagtaag agtgagataa aaaagagttt ttttgctcta ggtatgctta
     3601 taggtggcgg tggtatgata gtgggtgtga tacttgcgtt ttttgcttta tggcttttag
     3661 gaaattttga tatagtaagt ttacctgctg atgtttatgg aactagtaaa ttaccacttg
     3721 atttatcttt aatggatttt tctttaacta ttgtcggtgc tttagtaatc atagctttat
     3781 cgtcttttta tcctgctaaa aaagcaactc aaatcaatat tttagatact ttaagaaatg
     3841 aataaattat aattttggag atttttattg tctttgttta ttcaaaaaaa taagaatttt
     3901 aaacctttaa aacctctatc aaaattaaaa ataataacta atttaattct tttgatttta
     3961 tttttaatat tgttttgtta ttgcagtttt agtataagtg cttatcattt tgattttagt
     4021 gcaattataa cttataaaga aaaatttttt caaggttttt taaatacttt aatgattagt
     4081 tttttttctt tattgttgag tataatttta ggtggagttt tttgtgcttt ttctttaagt
     4141 tcgattattt ttttaagatt tttttctata ttttatatag aacttatcag aggaactcct
     4201 ttgcttgtac aggtgttgtt gatttattat attattgcaa acaacttagg atttgacaat
     4261 cgatatgtgg taggagttac tattttagca tgtttttctg ctgcttattt agctgagata
     4321 tttagagccg gaattttaag tatttctata tcccagcttg aaagtgctag ggctttagga
     4381 ttaaaagaga tacaaatttg tacatacata atatttcctc aagctttaaa aaatatttta
     4441 gcacctctta gtggtcaatt tgcaaattta attaaagaca gttccttgct gagcgttatt
     4501 gctgtaaatg aattaactca aaatgcacaa gaggtaaatt cttatacttt tgctactctt
     4561 gaagcttatg tagttttggc tattgcatat cttgttttaa ctttacctat aagtatactt
     4621 tctcgttatt tggagagaaa atattaaaaa tgatttaaaa aagcttgaca aatagagcta
     4681 attttggcat aatcagattt ttatttttaa aatgtctcgt tagctcagcc ggtagagcat
     4741 ctccctttta aggagggggc cgttggttcg aatccaacac gggacaccat tta
//
LOCUS       DAPWAA010000092         4755 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.092, whole genome shotgun sequence.
ACCESSION   DAPWAA010000092 DAPWAA010000000
VERSION     DAPWAA010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4755
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.092"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            50..2104
                     /locus_tag="RTF91_001629"
     CDS             50..2104
                     /locus_tag="RTF91_001629"
                     /inference="COORDINATES: protein motif:HMM:NF016357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDZ4944486.1"
                     /translation="MNDIEKKNYLQLLYVIFKNITIDTIMNFNLFGSWFFYKAGFLNC
                     FKQENPRFNILYLDNKIDNKDQIMLCYYSGSSTDILRIEIDYEQIYPNFYKKIKYDFI
                     GKNFVYQHRLWVNINQKLKGKLRIYLNGVITYISFNGRMFLELDISNFKQILNKDIIY
                     NNPWIFIDRDIEADDNAECLYRYFMKHHNELFVSKRLFFALNRNSIDWERLKNEGFHL
                     LDFNSYSFRKIARKASVLISSHADNYILKHFNKNVYFVFLQHGVIRDDLSHWLNSKPI
                     NIFITSTEKEFYSIVSNDSRYKFTKKEVILTGLPRHDRLSLANGQPSKYLLIMPTWRR
                     CLVDSIHSNSAQKKCNYQITESQFFIRWSSLLQSQELKYIAEKYGYEIIFCPHINMRP
                     ILHLMNVPDYIHVYTRSNHRSLSELFINSFLMITDYSSVAFEMAFLHKPVIYYQFDFN
                     DYFSLDNHTSQLGYFNFKRDGFGPVVQTESELIAELNNIIQFGFSNENYYLNIKNAFK
                     FRDGKSCERIYNEIVKTFDSNFDLNYDCKYILKRARNAIINRNHQQSFDDYMFAFKHE
                     FNLNEFDLINCLKLFFILDSDIILKEVNSKINKKLSSKFFIEYIDIMLLKNKCDKIEE
                     MLLKLNHIDGELIFLYYQIKKCILNNDIVGLKNIYNNKLSENYILANKILKYIFRKVK
                     EW"
     gene            2098..3462
                     /locus_tag="RTF91_001630"
     CDS             2098..3462
                     /locus_tag="RTF91_001630"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HDZ4944487.1"
                     /translation="MVNIILCGGKGTRLWPLSTNSMPKQFIKFFNDKSLFMLTLERNV
                     KLCSDTIVVTSEQYYYLALEQSNGKKIRYILEPNGKNTAASITLACLALPKDEIVLVT
                     PSDHLIKDNIAYNNAILEAENMAKYNNIIIFGIKPNYPEVDYGYIKIKNNDVLNFYEK
                     PKLDSVLKFIQDENYLWNSGMFVCRVDFLLEQISQHAPNIYKSCEKAYDNALKTDNTI
                     RIKADEMFSIPSNSIDYALLEKTKDIKIIPCNLNWNDLGSFRSLSKEFKTDESGNYCN
                     TINSLLNSKNNFIYSTCKEKNIIAIDIEDCFIIDTNNTLLVGKKESSARVKEIYEKIT
                     FKERDKLVYRPWGKFTVLDQGQGYKIKKIEVIPGKRLSLQKHFYRSEYWTVLSGVATV
                     EVDGIEKLIGKDESINIKVGQIHRLSNKGKMPLILIEIQIGQYTEEDDIIRLDDDYSR
                     IDVK"
     gene            3554..4414
                     /locus_tag="RTF91_001631"
                     /pseudo
     CDS             3554..4414
                     /locus_tag="RTF91_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344697.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
     gene            4474..4755
                     /locus_tag="RTF91_001632"
                     /pseudo
     CDS             4474..4755
                     /locus_tag="RTF91_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009882950.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
BASE COUNT         1831 a          499 c          717 g         1708 t
ORIGIN      
        1 tttttggcaa attaaaaatt tgataaataa ttcagaaaaa atttctttta tgaatgatat
       61 tgaaaagaaa aattatttac aattacttta tgtaattttt aaaaatatta caatagatac
      121 aattatgaat tttaatttat ttgggagttg gtttttttat aaagcaggct ttcttaattg
      181 ttttaaacag gaaaatccac ggtttaatat tttgtattta gataataaaa tagataataa
      241 agatcaaatt atgctttgtt attatagtgg ttcaagtaca gatattttaa gaatcgaaat
      301 tgattatgag caaatttatc ctaattttta taaaaaaatt aaatatgatt ttattggcaa
      361 gaattttgta tatcagcata ggttatgggt taatattaat caaaaattaa aaggaaaatt
      421 gagaatttat ttaaatggag ttattacata tattagtttt aatggtagaa tgtttcttga
      481 acttgatatt tcaaatttta aacaaatact taataaagat ataatttata ataatccatg
      541 gatatttatt gatagggata ttgaagctga tgataatgct gaatgcttat atagatattt
      601 tatgaagcat cacaacgagt tatttgtatc taaaagattg ttttttgctt taaatagaaa
      661 ttcaattgac tgggaaagat tgaaaaatga aggcttccat ttattagatt ttaattcata
      721 ttcttttcgg aaaattgcaa gaaaagcaag tgttctaata tcctcacatg ctgataatta
      781 tattttaaaa cattttaata aaaatgttta ttttgtattt ttacagcatg gtgttattag
      841 agatgattta tcgcactggc taaattctaa acctattaat attttcatta cttcaactga
      901 aaaagaattt tattcaattg taagcaatga tagtaggtat aaatttacaa aaaaagaagt
      961 gattcttact ggattgccaa gacatgatag attgagtttg gcaaatggtc aacctagtaa
     1021 atatttgctt attatgccaa cttggagaag atgtttggtt gatagcatcc attcaaattc
     1081 agctcaaaaa aaatgcaatt atcaaattac agagagtcaa ttttttatta gatggagttc
     1141 attattacaa agtcaagagt taaaatatat agctgaaaaa tatggatatg agattatttt
     1201 ttgtccccat ataaatatgc gtccaatatt acatttaatg aatgttccag attatattca
     1261 tgtctataca agaagcaatc atagaagctt aagcgagtta tttattaatt cttttttaat
     1321 gataacggat tactcaagtg tagcttttga aatggcattt ttacataaac cagttattta
     1381 ttatcagttt gactttaatg actatttttc tcttgataat catacttcac agcttggata
     1441 tttcaatttt aaaagagatg gatttggtcc agttgttcaa actgaatctg aacttattgc
     1501 agagcttaat aatataattc agttcggttt ttccaatgag aattattatc ttaatattaa
     1561 aaatgctttt aaatttagag atggaaagtc ttgtgagaga atttataatg aaattgtaaa
     1621 gacctttgat tctaattttg atttaaatta tgattgtaaa tatatattaa agcgagctag
     1681 aaatgcaatt atcaatagaa atcatcaaca atcttttgat gattatatgt ttgcatttaa
     1741 acacgaattt aatttaaatg aatttgattt aataaattgc cttaaattat tttttatttt
     1801 agatagtgat ataatcctta aagaagttaa tagcaagatc aataaaaaat tatcttcgaa
     1861 attttttatt gaatatattg atataatgtt attaaaaaat aaatgtgata aaatagaaga
     1921 gatgttatta aaattaaatc atatagatgg tgaattgatt tttttatatt atcaaattaa
     1981 aaagtgtatt ttaaataatg atatagttgg tttaaagaat atatataaca ataaattatc
     2041 tgagaattat atattagcaa ataaaatatt aaagtatatt tttagaaagg ttaaagaatg
     2101 gtaaatatta ttctttgcgg tggaaagggt acaagacttt ggccattaag tacaaattct
     2161 atgccgaaac agtttataaa gttttttaat gataaatcat tatttatgtt aactcttgaa
     2221 agaaatgtta aattatgttc tgatacaatt gttgtaactt cggaacagta ttattatttg
     2281 gctctagagc aatcaaatgg aaagaaaata agatatatat tagagcctaa cggaaaaaat
     2341 acggccgcat ctataacctt ggcttgtctt gctttgccaa aagatgagat tgttttggtt
     2401 actccaagcg atcacttaat taaagataat atagcttata ataatgcaat tttagaagca
     2461 gaaaatatgg caaaatataa taatattatc atatttggta ttaaaccgaa ttatcctgaa
     2521 gtagattatg ggtatataaa aattaaaaat aatgatgttt taaattttta cgagaaaccg
     2581 aaattagata gtgtgcttaa atttatacaa gatgaaaatt atctttggaa ttctgggatg
     2641 tttgtatgta gagttgattt tttgctagag caaataagtc agcatgctcc taatatttat
     2701 aagtcatgtg agaaggctta tgacaatgct ttgaagactg ataatacaat caggattaaa
     2761 gctgatgaaa tgttttctat tccttcgaat agtattgatt atgcattatt ggaaaaaact
     2821 aaagatatta aaataattcc ttgcaatctc aattggaatg acttaggtag ttttaggagc
     2881 ttgtcaaaag aatttaaaac agatgaaagt ggaaattatt gtaatacaat aaatagttta
     2941 ttaaattcta aaaataattt tatttattca acttgtaagg aaaaaaatat tatcgcaatt
     3001 gatattgaag attgttttat aattgacaca aataacactc tattagtagg aaaaaaagaa
     3061 agtagtgcta gagtgaaaga aatctatgaa aaaattacat ttaaggagag agataagtta
     3121 gtataccgcc cttggggtaa atttactgtt ttagaccaag gtcaaggtta taaaattaag
     3181 aaaatcgaag taattccagg aaagcgactt tcccttcaaa aacattttta tagaagtgaa
     3241 tattggacag ttttaagtgg agttgctact gtagaagttg acggcataga aaagttgatt
     3301 ggcaaagatg aatcaataaa tattaaagta ggtcaaattc atcgtttaag caataaagga
     3361 aaaatgccat tgatattaat agagattcag attgggcaat ataccgaaga agatgatatt
     3421 attcgattgg atgatgatta ttctaggata gatgttaaat aaatatttat ttaatttttt
     3481 atttttaagt gtataataat tgatcttgat gtaaatatta tcaagggtaa aaaataaagg
     3541 agtgtaaaag ttaatgacaa cccacatcta tgatttccta gaaaaaagtt tgattaaatt
     3601 tagtgaaaaa actgcttttg tagaaccttt tgctagagaa agaaaagaaa tcacttataa
     3661 agactttgat cttttttcta aaaaactagc cagtgaaatt ttaagaactt taggaaataa
     3721 tgaacctact caagctcctg ttttaatcat cctacctaaa gggattgatt gtttgatttc
     3781 attttttgga gtggcattaa gtggaatttt tatacccttt tatgatgaaa aaagtcctaa
     3841 agaaagagta gaaaaagtca tagaggtttt aaaacctaaa ctttttatca cttcaaagga
     3901 tttaaatttt aacttagatt tgcctacact ttatacacaa gactttgaaa gttttaatat
     3961 agatgagagt ttgctaaaaa ctgcaaaaga aaaacacata gatactaatt tactctatgt
     4021 tctttttaca agtgggagca caggcattcc taaaggagtc agcatagctc ataagagtgt
     4081 aattgactat actttttggt tttgtaatga atttgatata aatgaaaatg aaatttttgc
     4141 caatcaagtt caatttcatt ttgatgtttc agtatctgat ataatgtctt gtgtcgcaaa
     4201 aggagcgact ttgcacctta cacctaatca tctttttgcc tttccaaata aaattttaga
     4261 atgccttgaa aaagaaaaag taagcactat attttgggta ccttcggtgc tgatttattt
     4321 tgcaaatgaa aaaggattgc aaaaatattc actaaatctt ttaagaaaaa ttctctttgc
     4381 tggtgaaatc atgcctaata aacagctaaa tctttaggtg taaacatgag tataataaat
     4441 cctaaaatca gtttcattca aacaaattca gtcaaatttc gcattcaaaa tcatctatct
     4501 tataaactag ggcaagcttt aatagaaaat tcaaaaagta tcttaggtta tataagaatg
     4561 ccttatgtat tatcttatat aaaagacaaa cataaatttg aacaaaaagc ctatgaagaa
     4621 aaaataaaac aaaatccaaa tttagcctta cctcatttag ccttacctcc tttagaaact
     4681 tatcctgatt ataatgaagc tttaaaagaa aaagaatgtt ttacttataa attaggagaa
     4741 gcttttatta aagct
//
LOCUS       DAPWAA010000093         3954 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.093, whole genome shotgun sequence.
ACCESSION   DAPWAA010000093 DAPWAA010000000
VERSION     DAPWAA010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3954
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.093"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            1..480
                     /gene="mobB"
                     /locus_tag="RTF91_001633"
     CDS             1..480
                     /gene="mobB"
                     /locus_tag="RTF91_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HDZ4944488.1"
                     /translation="MMAFSGPSNSGKTTLITKIADSFLQQNLKVLIIKHDPADKAQFD
                     FNGKDSFKFFQSGAEVMVLSPTRTTFFSHENRDILKALKLVPDFDICLVEGLKTLDLP
                     RISVFCKEVDESYFTFSNAIASYEKISHPYLAWLDLNNIQAVCQYILKNAKNLQGEL"
     gene            482..1324
                     /locus_tag="RTF91_001634"
     CDS             482..1324
                     /locus_tag="RTF91_001634"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDZ4944489.1"
                     /translation="MQEVISHIQKAVLEISNALKFPDTSYSQNHNSTGDAQLKFDILS
                     DKIITKTLGQCPNIKAIISEEKDEILTLNEKAKFIVAYDPLDGSSLMDVNFAIGSIFA
                     IYEEKESVKNLKAALYSIYGARLELVICKELPKLYRLNANNEFIFIKDLKMNEKGKIN
                     ATGGTQKFWEEKHAKFIKSLFDEGYRLRYSGAMVSDINQILLKGGGIFSYPATQDAPN
                     GKLRAFFEVFPLAFIIEKAGGKTTNGKNHSLLELDFDKIHATTPCFFGSEYEISKLLK
                     AYNE"
     gene            1317..1514
                     /locus_tag="RTF91_001635"
     CDS             1317..1514
                     /locus_tag="RTF91_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944490.1"
                     /translation="MSEVKDEFERDMDKKKEILLSCQNSKNLNSCYNCDEIFNCQTRK
                     DYVDAVYNSMSKGKTEGGFDF"
     gene            1524..3401
                     /gene="metG"
                     /locus_tag="RTF91_001636"
     CDS             1524..3401
                     /gene="metG"
                     /locus_tag="RTF91_001636"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDZ4944491.1"
                     /translation="MRYITTPIYYVNDMPHLGHAYTTIIADTLARFYRLQGHETRFLT
                     GTDEHGQKIEEAAKLRNFTPQEYADKISSEFKKLWDEFEITYDIYARTTDIRHIEFVK
                     AMFLKMWQKGDIYKDEYKGHYCVSCESFFTQSQLINEYSCPDCGKQTRILKEESYFFK
                     LSKYQDKILQWYQEKDPILPKNKKNELVNFVQSGLKDLSITRTSFDWGIKLPQEINDD
                     KHIVYVWLDALFIYVSSLDFQCKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDL
                     PLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEMVDAYGSEAFRYFLLREVPFGIDGDFS
                     ENMLINRINAELSNEFGNLLNRIIGMSIKYSQGNISKENVLKFYNAELNQTKEHLNLA
                     VEFLENLQCNRYLEELFKALSVANLAISKYEPWNLIKENKHEQANALVALCANILAKT
                     SLLLSPALPKSCQKVALALNFEISSINYTKIILNNELLDFKANSCEALFPKIEKNQEI
                     KEKVKKEENPKIKIDDFVKIEIKVAKVLDCQNIEGSEKLLKFQLELDNKEIRQVLSGI
                     AKHYKARDLIGKQVCVISNLKKAKIFGHESDGMILSAKSGDKLVLITPEQLIENGSLI
                     G"
     gene            3405..>3954
                     /locus_tag="RTF91_001637"
     CDS             3405..>3954
                     /locus_tag="RTF91_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944492.1"
                     /translation="MQISNLGELLNATLIHEGSVLSVEGFAINLNELKAGFAFFNNDK
                     KEITQAIEKGAYVIITESDIAVEDKEIFYFKVENLEQALIRFLRFFCEDKECEFLLFK
                     SYELSLCKAFYFNILKGNIFADFEKLIKTKKSEIFCYCEENYLNKLCTYSYSLKETNF
                     TLLSRSSFFFTTLICENLYFKNL"
BASE COUNT         1486 a          535 c          641 g         1292 t
ORIGIN      
        1 atcatggctt ttagtggacc ttcaaattcg ggtaaaacta cacttatcac caaaatagct
       61 gacagttttt tacagcaaaa tttaaaagtt ttaatcatca aacacgatcc tgctgataag
      121 gctcaatttg attttaatgg caaagatagt tttaaatttt ttcaaagtgg agctgaagta
      181 atggttttaa gtcctacaag aacaactttt ttttctcatg aaaatagaga tattttaaaa
      241 gctttaaaat tagttcctga ttttgatatt tgtttggttg aaggattaaa aactcttgat
      301 ttaccacgca ttagtgtatt ttgtaaagaa gttgatgaaa gttattttac tttttcaaat
      361 gccattgcaa gctatgaaaa aatttctcat ccttatcttg cttggcttga tttaaacaat
      421 atacaagctg tttgtcaata catacttaaa aacgctaaaa atttacaagg agaattataa
      481 aatgcaagaa gtgatttccc atatacaaaa agcagtttta gaaatttcta atgctttaaa
      541 atttcctgac acaagttaca gtcaaaacca taattccaca ggagatgctc aacttaaatt
      601 tgatatttta agcgataaaa tcatcacaaa aaccttgggt caatgtccaa acattaaagc
      661 tatcataagc gaagaaaaag atgaaatttt aacactcaat gaaaaagcaa aatttatcgt
      721 ggcttatgat cctttggatg gttctagttt aatggatgtt aactttgcca taggttctat
      781 ttttgccatc tatgaagaaa aagaaagtgt taaaaattta aaagccgcac tttatagcat
      841 atatggagca cgcttagaac ttgtaatttg taaagagcta ccaaaacttt atcgtctaaa
      901 tgcaaataat gaatttattt ttataaaaga tcttaaaatg aacgaaaaag gcaagatcaa
      961 tgctacaggc ggaacgcaaa aattttggga agaaaaacac gctaaattta tcaaaagtct
     1021 ttttgatgaa ggataccgct taagatattc aggagctatg gtaagtgata tcaatcaaat
     1081 tctattaaaa ggtggaggaa tttttagcta tcctgcaacc caagatgcac ctaatggtaa
     1141 acttcgtgct ttttttgaag tctttccttt ggcttttatt atagaaaaag caggtggaaa
     1201 aactacaaat ggaaaaaatc attctttgct tgaacttgat tttgacaaaa tccatgcaac
     1261 aactccttgt ttttttggtt cagagtatga aatttcaaaa cttttaaagg cttataatga
     1321 gtgaagttaa agatgaattt gaacgcgata tggataaaaa aaaggaaatt ttactttcat
     1381 gtcaaaactc aaaaaaccta aactcttgtt ataattgcga tgaaattttt aactgccaaa
     1441 ctagaaaaga ttatgttgat gcggtttata atagtatgtc caagggtaaa accgaaggcg
     1501 gatttgactt ttaaaggaaa aaaatgcgtt atattacaac accgatttat tatgtaaatg
     1561 atatgcctca cttaggccat gcttatacca ctatcatagc cgatacttta gcaaggtttt
     1621 atcgtcttca aggccatgaa acaagatttc taacaggaac agatgaacat gggcaaaaaa
     1681 tcgaagaagc tgctaaacta agaaatttca ctccgcaaga atatgctgat aaaatcagtt
     1741 ctgaatttaa aaaactatgg gatgaatttg aaatcacata tgatatttac gcaagaacaa
     1801 ccgatataag acatattgaa tttgttaaag ctatgttttt aaaaatgtgg caaaaaggtg
     1861 atatttataa agatgaatac aaaggacatt attgcgtttc ttgtgaaagc ttctttactc
     1921 aaagtcagct tattaatgaa tattcttgtc ctgattgcgg taagcaaact agaattttaa
     1981 aagaagaaag ctattttttc aaactttcaa aataccaaga taaaatttta caatggtatc
     2041 aagaaaaaga tcccattcta ccaaaaaaca aaaaaaacga acttgtaaat ttcgttcaaa
     2101 gcggtcttaa agatctttct attactagaa cgagttttga ttgggggatt aaactacccc
     2161 aagaaattaa cgatgataaa cacattgttt atgtatggct tgatgcactt tttatctatg
     2221 taagttctct tgattttcaa tgcaaaggag aaaatgctaa attttggcct gcacatgtgc
     2281 atttagtagg aaaggatatc ttgcgttttc atgcgattta ttggccagct tttttaatga
     2341 gcgtggattt gcctttacct aaatttatag gtgcacacgg ttggtggact aaagaaggtg
     2401 aaaaaatgag caaatccaaa ggaaatgttg taaaacctaa agaaatggtt gatgcttatg
     2461 gaagtgaagc ttttagatac tttttactta gggaagtgcc ttttggtatt gatggggatt
     2521 ttagtgaaaa tatgctgatt aatcgtatta atgctgaact tagtaatgaa tttggaaatt
     2581 tgcttaatcg tatcataggt atgagtataa aatattctca gggaaatatt tcaaaggaaa
     2641 atgttttaaa attttataat gctgaattaa atcaaacaaa agaacactta aatttggctg
     2701 tggaattttt agaaaactta caatgtaatc gttacctaga agaacttttt aaagctttaa
     2761 gtgtagcaaa tttagccatt agcaaatatg aaccttggaa tttaatcaaa gaaaataaac
     2821 acgaacaagc taatgcttta gttgcacttt gcgcaaatat tttagctaaa acaagccttt
     2881 tattaagccc tgctctacca aaatcttgtc aaaaggtagc cttagcttta aattttgaaa
     2941 tttcatctat aaactacaca aaaattatac taaataatga acttttagat tttaaagcaa
     3001 actcttgcga agctttattt ccaaagatag aaaaaaacca agaaatcaaa gaaaaagtta
     3061 aaaaagaaga aaatcctaag ataaaaatcg atgattttgt taaaattgaa atcaaggttg
     3121 ctaaagtact tgattgtcaa aatatagaag gtagcgaaaa acttttgaaa tttcaacttg
     3181 aacttgacaa taaagaaatc cgtcaagtac tctcaggcat agcaaaacat tacaaagcta
     3241 gagatttaat cggaaagcaa gtttgcgtta taagcaatct taaaaaagct aaaatttttg
     3301 gacatgaaag cgatggtatg atactttctg caaaaagcgg tgataagctt gttttaatca
     3361 cgcctgaaca acttatagaa aatggctctt tgataggtta aaatatgcaa attagtaatt
     3421 taggtgaact tctaaacgca acacttattc acgaaggtag tgttttaagc gtggaaggct
     3481 ttgctataaa tttaaatgag cttaaagcag gctttgcttt ctttaataat gataaaaaag
     3541 aaattaccca agctatagaa aaaggtgctt atgttataat tacagaaagt gatattgctg
     3601 ttgaagataa agagattttt tactttaagg tagaaaactt agaacaagca cttattagat
     3661 ttttacgttt tttttgcgaa gacaaagaat gcgaattttt actttttaaa tcttacgaac
     3721 taagtctttg taaagctttt tactttaata ttttaaaagg aaatattttt gctgattttg
     3781 aaaaattaat caaaacaaaa aaaagtgaaa ttttttgcta ttgtgaggaa aattacctaa
     3841 ataaactttg cacttattct tatagtttaa aagaaactaa ttttacttta ctatcacgat
     3901 ctagtttctt ttttacaact ttaatttgtg aaaatttgta ttttaaaaat ctta
//
LOCUS       DAPWAA010000094         3948 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.094, whole genome shotgun sequence.
ACCESSION   DAPWAA010000094 DAPWAA010000000
VERSION     DAPWAA010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3948)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3948)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3948
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.094"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            170..1270
                     /gene="prfB"
                     /locus_tag="RTF91_001638"
     CDS             170..1270
                     /gene="prfB"
                     /locus_tag="RTF91_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDZ4944493.1"
                     /translation="MDNYEFSELLKILKNKVGNIASIIKPENIQTRLKEIEELENSPS
                     FWSDVKQAGVIGKEKTKITNLLKNYENAFNALNDASELFDLANSENDTETLEALFNDV
                     PKLEDTITSLEISMLLSGENDSKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGF
                     KVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSS
                     VMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQND
                     RSQHKNKATAFKMLKSRLYELELIKQQDNANAGEKSEIGWGHQIRSYVLFPYQQVKDN
                     RSGEAFSQVDNILDGDIKKMIEGVLIALKVEQ"
     gene            complement(1429..2547)
                     /gene="truD"
                     /locus_tag="RTF91_001639"
     CDS             complement(1429..2547)
                     /gene="truD"
                     /locus_tag="RTF91_001639"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDZ4944494.1"
                     /translation="MNLAEENTIFKPLYSLKHSPINAYFSKNSDDFVVREKPLYKFSG
                     KGEHLILHINKKDLTTNEALKILSEASGVKMRDFGYAGLKDKQGLTFQYLSMPKKFES
                     FLLNFSHSKLKILETFIHENKLRIGHLKGNSFFIRLKKVLPSDALKLEQALINLNKQG
                     FANYFGYQRFGKFGDNYKEGLEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELS
                     HFANDFSEKELAQIYKISKGEAKELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAEL
                     ERFKARDISAMGLLIGAKAYETGQGLALNLENEIFKDTLEFKTKMQGSRRFMWGYLED
                     VKWRYDEEKAHFCIEFFLQKGSYATVVLEEILHKNLLE"
     gene            complement(2516..3337)
                     /locus_tag="RTF91_001640"
     CDS             complement(2516..3337)
                     /locus_tag="RTF91_001640"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDZ4944495.1"
                     /translation="MNKEDFIIKAFLNEKNGDDGAIIDNWCFSKDLFFENVHFKREWF
                     SLEQIATKAMLVNISDAIVMNAIPKYALLGLALPKNFSENEIKALQKGFLKTTRKFNI
                     EIIGGDTISNDKIDISLTIISKINNKAVFRKGLKKGHLLAHTGRLGQSLKGLEILQNG
                     GILSPNHVFIKPKLRSSFFYEIAPLVSCAMDISDGLSKDLSRLLSLNKCGIFWFKKLD
                     DYALYSGEEYEILFAFDEKERQNIQTIAKKHGVKLNIFGKAVKGKYEFSGREHHF"
     gene            3424..>3948
                     /locus_tag="RTF91_001641"
     CDS             3424..>3948
                     /locus_tag="RTF91_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944496.1"
                     /translation="MKKLELRIFRFDKTKDYEAYYKPYVYNNYENFASFYDLLLQVQD
                     DDIYFDFDKDENTYIVVNKQIIPLFTPLEEVAKEFDFNLCIEPLSTKRAIKDLIIDKN
                     DFLDKYKYLEKFGNEEDKKLYTKYDYLYYASEILHYHPDYMGNGVFYLASKMIEKYPE
                     KKIEILKTLADKKKG"
BASE COUNT         1441 a          623 c          544 g         1340 t
ORIGIN      
        1 atcaaattta tattcaaaga tgtgcctagg ttgaagaggg agtttggaaa aagttaaaaa
       61 atcataaaat tcttttcttt attcaagatg taaaaaacat atgcgtagat ttttttaatg
      121 taaaatttgc tagaataata tcttgtaaaa atcgagaaag aaaattttta tggataatta
      181 cgaatttagc gaacttttaa aaatcttaaa aaacaaagtt ggcaacatag cctccatcat
      241 caagcctgaa aatatccaaa caaggcttaa agaaattgaa gagcttgaaa attctccttc
      301 tttttggagt gatgtcaaac aagcaggagt cataggtaaa gaaaaaacta aaattaccaa
      361 tctacttaaa aactatgaaa atgctttcaa tgctttaaat gacgcaagcg aactttttga
      421 tctagccaat agcgaaaacg atacagaaac gcttgaagct ttatttaatg acgtaccaaa
      481 acttgaagat actattacaa gtcttgaaat ttccatgctt ttaagcggag aaaatgatag
      541 taaaaatgcc attgtttcca ttcaccctgg tgcaggcgga acagaaagca atgactgggc
      601 aagcatactt tatagaatgt atttaaggtt ttgcgaaaga gaaggtttta aggttgaaac
      661 tctagacttt caagaaggtg aagaagcagg acttaaagat gtaagctttt tggttaaggg
      721 tgaaaatgct tatggttatt taaaggctga aaatggtatt catcgtttag taagaacttc
      781 tccttttgat agtgcaggac gccggcatac aagcttttca agcgttatgg taagccctga
      841 gcttgatgat gatatagaaa tagaaatcga agaaaaagat ataagaatag actattaccg
      901 agcaagcggt gcgggtgggc aacatgtcaa taaaacagaa tcagccgtaa gaattacaca
      961 ttttccaacc ggcatagtcg tacaatgtca aaatgacaga agccaacaca aaaacaaagc
     1021 tactgctttt aaaatgctaa aatctcgcct ttatgagctt gagcttataa aacaacaaga
     1081 taatgccaat gctggcgaaa aaagtgagat aggctggggg catcaaatcc gatcttatgt
     1141 gctttttcct tatcagcaag tcaaagataa tcgcagcgga gaagctttct ctcaagtgga
     1201 taatatcctt gatggggata ttaaaaaaat gatagaaggt gttttaatcg ctttaaaagt
     1261 ggagcaatga ctataattaa gtatcaaata atttaacaaa acaaaaaatt atacataaac
     1321 aaaactcctt tctgcttacc atactcttta ataaataatc ttattgctta aatttaaatt
     1381 cattattcaa taataaaaat ttcaattaat acttgttact aaactatttc actcaagcaa
     1441 atttttatgt aaaatttctt ctaaaaccac agtggcataa gaaccttttt gtaagaaaaa
     1501 ttctatacaa aaatgagctt tttcttcatc ataacgccat tttacatctt ctaaatatcc
     1561 ccacataaag cgtcttgaac cttgcatttt ggtcttaaac tctaaagtat ccttaaagat
     1621 ttcattttct aaatttaaag ctaagccttg tcctgtttca taagccttag caccgattaa
     1681 aagccccata gcgctaatat cccttgcctt aaaacgctca agttcagcac ttaaatcttc
     1741 acataaaaaa cattttccaa aaggataatg ccctaaaact tcgcctttta aaagcttaaa
     1801 aaattgctct tgttttttaa gttctttagc ttctccttta gaaattttat aaatttgcgc
     1861 taattctttc tcgctaaaat catttgcaaa atgtgataac tccactcttt tgctcaaata
     1921 gcgattaaaa agctcacttt gaaaagctga gattaaaaac tctttcattt ttacattttt
     1981 catctttttt ccgcgtaaaa tttccagtcc ttctttataa ttatctccaa attttccaaa
     2041 acgctgataa ccaaaataat tcgcaaaacc ttgtttattt aaatttatca aagcttgttc
     2101 tagttttaaa gcatcacttg gcagaacttt ttttaagcgt ataaaaaaag aatttccttt
     2161 taaatggcct attcttaact tattttcatg gatgaaagtt tctaaaattt taagcttaga
     2221 atgagaaaaa tttaacaaaa aactttcgaa ttttttaggc atagaaaggt attgaaaagt
     2281 taatccttgt ttgtctttaa gcccagcata accaaaatca cgcattttaa ctccgcttgc
     2341 ctcacttaaa atttttaaag cttcgtttgt agttaaatcc tttttattaa tatgcaagat
     2401 aagatgctca cctttaccac taaatttata caaaggtttt tcacgcacca caaaatcatc
     2461 gctattttta ctaaaatacg cattaatagg actgtgtttt aaactataca aaggtttaaa
     2521 aatggtgttc tcttccgcta aattcatatt ttcctttcac tgcttttcca aaaatattta
     2581 atttcacacc gtgttttttg gctattgttt gtatattttg acgctctttt tcatcaaaag
     2641 caaataaaat ttcatattct tccccactat aaagtgcata atcatcaagc tttttaaacc
     2701 aaaaaattcc acacttattc aaggataaaa gtcttgataa atccttgctt aagccatctg
     2761 aaatatccat agcacaagat actaaaggtg caatttcata aaaaaaacta gatcttaatt
     2821 ttggctttat aaatacatga tttgggctta aaataccccc attttgtaaa atttcaagtc
     2881 cctttaaact ctgccctaat cttcctgtat gagcaagtaa atgtcctttc tttaaacctt
     2941 ttctaaatac agctttgtta ttgatctttg aaatgatagt gagactaatg tctattttat
     3001 cattacttat agtatcaccg cctatgattt ctatattaaa tttcctagtt gtttttaaaa
     3061 aacctttttg taaagctttg atttcatttt cactgaaatt ttttggtaaa gcaagtccta
     3121 aaagtgcgta ttttggaatg gcattcatca caatagcatc tgaaatatta acaagcattg
     3181 cttttgtagc aatttgttct aggctaaacc actctctttt aaaatgcaca ttttcaaaaa
     3241 acaaatcctt actaaaacac caattatcaa taatagctcc atcatcgcca tttttttcat
     3301 ttaaaaaagc tttaataata aaatcttctt tgttcataat gcgtgatttt ataaaatttg
     3361 cttttaaatt ctagtgaatt ttagaaaaat tttatataat atagaaatat ttaaggaaaa
     3421 gctatgaaaa aattagaatt aagaattttt agatttgata aaactaagga ttatgaggct
     3481 tattataaac cctatgttta taataattat gaaaattttg caagttttta tgatttgctt
     3541 ttgcaagttc aagatgatga tatttatttt gattttgaca aagatgaaaa cacttacata
     3601 gtagtaaata aacagattat accacttttt acacctttag aagaagtagc aaaagaattt
     3661 gattttaatc tttgtatcga acctttaagc acaaaaagag ctattaaaga tcttatcatt
     3721 gataaaaatg attttttaga caaatacaaa tatcttgaaa aatttggtaa tgaagaagat
     3781 aaaaagcttt atacaaaata cgattattta tattatgcaa gtgaaatttt gcactatcat
     3841 cctgattata tgggaaatgg ggtgttttat ttagcttcaa aaatgataga aaaatatcct
     3901 gaaaaaaaga tagaaatttt aaaaaccctt gcagataaaa aaaaggga
//
LOCUS       DAPWAA010000095         3864 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.095, whole genome shotgun sequence.
ACCESSION   DAPWAA010000095 DAPWAA010000000
VERSION     DAPWAA010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3864
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.095"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            23..3763
                     /locus_tag="RTF91_001642"
     CDS             23..3763
                     /locus_tag="RTF91_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /protein_id="HDZ4944497.1"
                     /translation="MKFEVVNEKEFLNPYHRKKPILETELNEFIKALKDYKTNLENNF
                     KNNEDSLVANALSKFFENLNFECEVKSIHKGNSGIDLALKKERLTQVIIEAKLPGSKE
                     FFSPNKPNCKALHECILYYLRERKALNSSLKHIIITNFYSFFIFKADLFEEFFNKNKN
                     FKEAFENFESRNSVFKGNTDEIYKEFEKILNTNCNFQSGLKGLFVDLKPILEQDKLSF
                     SKLKPLFKIFSKDCLLSEFNPNDANSLNNAFYKELLYILGLCESKQNSKLIIAKSQES
                     KEEQGTFYTAINSKLKEENFETILKLLILWLNRILFLKLIESNLVRFNDDKNLKFLNF
                     KKIPDFDKLSELFFEILAKEKSKRKKSVFAYLPYLNSSLFEKQSIENTLEISSLSNDL
                     KLFYYKNTVLKDDKCKVKKGQVGLLEYLFEFLDSFDFGSDDEQSEILSQKELISSSVL
                     GNVFEKLNGYKEGSFYTPSFITSYMCKESITKIVLDKFNAKFDLDAKDISELRKSLRK
                     EDKKIQKELLNSIKICDPAVGSGHFLVSALNVCLSIYDELNLFNEEFYLEVQNDEILI
                     IDRKGEFIEYKRPSTPKDKAHLIQQELFHTKKDIIENNLFGVDINPNSCEITKLRLWI
                     ELLKHSFYQSFEDENYHDLKTLPNIDINIKCGNSLVSYFETGKSLSHYPNIKERINKY
                     KRIVKDYKEGFYTDKGQINQEIKNLKESFKNFCFADKFKKEMKGFNDKCEKYSKKYGN
                     YLAVDDEELKFFVSANLTLFDFDEKEATKKFANLKKEYDKIFNLESNHPFEWRFEFPE
                     ILDDDGNFKGFDLIIGNPPYIRQEELKELKTHLAKNYEVYKGTSDIYTYFYELGFNVL
                     RNGGGVLNFITSNKYTRAGYGEALREFLLKNVSILEYTDFNGVKVFDSATVDTSILCF
                     EKSKGKDNKFKYLALDNEILKVCAYHIDLCKDFKEFSQKSLSKENFTFSDENASALKA
                     KIEKIGTPLKEWYGLNIYRGILTGYNEAFIISTEKRNEILANCKDDDEKERTAKLIRK
                     MLRGRDIKRYSYEWAGLWVIGTFPSLKIDIEQYLALKQYLSQFLPRIEQSGEKGCRKK
                     TSNKWFETQDNIAYYEEFEKEKIVWNRISSDLCFSYDNQKKFILDSMFSITFYSNINL
                     KYLIANLNSSISKFWIKNNAATLGDGIYGAKIYIEKLPIPKINSKNEKIANELINLVD
                     EILKAKEQDKNANTQELENKINSLVYKLYNLTEDEIKIIEGK"
BASE COUNT         1530 a          516 c          625 g         1193 t
ORIGIN      
        1 taaaatttat tgaaagtgaa atatgaaatt tgaagttgta aacgaaaaag aatttttaaa
       61 cccctatcac cgcaaaaaac ccatcttaga aacagagtta aacgaattta tcaaggcttt
      121 aaaagattat aaaacaaatt tagaaaataa ttttaaaaac aacgaagatt ctcttgtggc
      181 aaacgctctt agcaaatttt ttgaaaattt aaatttcgaa tgcgaagtca aaagtataca
      241 taaaggtaac agtggcatag acttagcttt aaaaaaagag agacttactc aagttatcat
      301 cgaagcaaaa ttacctggtt ctaaagaatt ttttagcccg aacaaaccta attgcaaggc
      361 tttgcacgag tgcattttat actatcttcg tgaaagaaag gctttaaatt catcacttaa
      421 gcacattatc attacgaatt tttatagctt ttttatcttt aaagcggatt tgtttgaaga
      481 gttctttaat aaaaacaaga attttaaaga agcttttgaa aattttgaaa gtagaaattc
      541 tgtttttaaa ggcaataccg atgaaattta taaggaattt gaaaagattt taaatactaa
      601 ttgcaatttt caaagtggtt taaaaggact ttttgtcgat ttaaaaccga ttttagagca
      661 agataaatta agctttagca agcttaaacc tttgtttaaa atttttagta aagattgttt
      721 gctaagtgag tttaatccca acgatgcaaa ttcactcaac aacgcttttt acaaagagct
      781 tttatacatc ctaggacttt gtgaaagcaa acaaaactca aaactcatca tcgcaaaaag
      841 ccaagagagc aaagaagaac aaggcacttt ttataccgct ataaactcca aacttaaaga
      901 agaaaatttt gaaaccattt taaaactttt gatcttatgg cttaatcgca ttttgttttt
      961 aaaacttata gagtccaatt tggtgcgttt taatgatgat aaaaatttga aatttttaaa
     1021 ttttaaaaaa atccctgatt ttgataaatt aagcgaactt ttctttgaaa ttttggctaa
     1081 agaaaaaagc aaaagaaaga aaagtgtatt tgcttatctg ccttatctaa attcttcttt
     1141 atttgaaaaa caaagcatag aaaatacgct tgaaatttca agtttaagca atgacttaaa
     1201 gcttttttac tacaaaaaca ccgtgctaaa agacgataaa tgcaaagtta aaaaagggca
     1261 agtggggctt ttggaatatt tgtttgaatt tttggatagt tttgattttg gtagtgatga
     1321 tgagcaaagc gaaattttaa gtcaaaaaga actcataagt tcaagcgttt taggaaatgt
     1381 gtttgaaaaa ctaaacggct acaaagaagg gagcttttac acgccaagct ttatcacttc
     1441 ttatatgtgc aaagaaagta tcacaaaaat cgtgcttgat aaatttaatg ctaaatttga
     1501 tcttgatgct aaggatataa gcgaactaag aaagtcttta agaaaagaag ataaaaagat
     1561 acaaaaagag cttttaaact ccataaaaat ttgcgatcct gccgtaggaa gtgggcattt
     1621 tctagtttct gctttgaatg tttgtcttag tatctatgat gagttaaatc tttttaatga
     1681 agaattttac ctagaagtgc aaaatgatga aattctcatc atagatagaa aaggcgagtt
     1741 tatagagtat aaacgtccaa gcacacctaa agataaagct catcttatac aacaagaact
     1801 ttttcatacc aaaaaagaca tcatagagaa caaccttttt ggagtcgata tcaaccccaa
     1861 ctcatgcgag attaccaagc taaggctttg gatagaactt ttaaaacaca gcttttatca
     1921 aagctttgag gatgagaatt atcacgatct taaaaccctt ccaaacattg atataaacat
     1981 aaaatgcggg aattctttgg tgtcttattt tgaaacaggt aaaagcctaa gccattaccc
     2041 taacatcaaa gaacgcataa ataaatataa acgcatagta aaagactata aagaaggctt
     2101 ttacacggat aaaggtcaaa tcaaccaaga gataaaaaat ctcaaagagt cttttaaaaa
     2161 tttctgtttt gcggataaat tcaaaaaaga aatgaagggc tttaacgaca aatgcgaaaa
     2221 atactctaaa aaatacggca attacttggc tgtagatgat gaggagttga aattttttgt
     2281 cagtgcgaat ttgactcttt ttgactttga tgaaaaagaa gccacaaaaa aatttgcaaa
     2341 tcttaaaaaa gaatacgaca agatcttcaa cctagaaagc aatcatcctt ttgaatggcg
     2401 ttttgaattc cctgaaattt tagacgatga tggaaatttc aaaggttttg atctaatcat
     2461 tggcaatccg ccttatataa gacaagaaga gcttaaagaa ctcaaaaccc atttagctaa
     2521 aaactatgag gtttataaag gtacgagtga catttatact tatttttatg aattaggatt
     2581 taatgtctta agaaatgggg ggggggtatt gaatttcata acctctaaca aatacacgcg
     2641 cgcaggatac ggagaagctt tgcgtgaatt tttgcttaaa aatgtttcga ttttagaata
     2701 cactgatttt aatggtgtaa aagtttttga tagtgctacg gtggatactt ctatactttg
     2761 ctttgaaaaa tcaaaaggca aagataataa attcaaatat cttgctttag ataatgaaat
     2821 tttaaaagtt tgtgcatatc atattgattt atgtaaggat tttaaagaat tttcgcaaaa
     2881 gtctttaagt aaagaaaact tcacttttag cgatgaaaat gctagtgctt taaaagctaa
     2941 gatagaaaaa atcggaacac cgcttaaaga atggtatggg cttaatatat atcgtggaat
     3001 tttaacaggt tacaatgaag cctttatcat cagcacagaa aaaagaaatg aaattttagc
     3061 aaattgtaaa gacgatgatg aaaaagaacg caccgccaag ctcatacgca aaatgctacg
     3121 aggacgtgat ataaaaagat atagctatga atgggcgggg ctttgggtga taggaacttt
     3181 tccaagttta aaaatcgata tagaacaata tcttgcttta aagcaatatt tatctcaatt
     3241 tttaccacgc atagaacaaa gcggtgaaaa aggttgtaga aagaaaacta gcaataaatg
     3301 gtttgaaact caagataata tcgcttatta tgaagaattt gaaaaagaaa agatagtttg
     3361 gaatagaatt tcaagtgatt tatgcttttc ttatgataat caaaaaaaat ttattttgga
     3421 ttctatgttt tctataactt tctattctaa tataaattta aaatatttaa tagcaaattt
     3481 aaattctagt atttcaaaat tttggataaa aaataatgct gccacattag gcgatgggat
     3541 ttatggtgct aaaatttaca tagaaaaact tcctatacca aaaataaatt ctaaaaatga
     3601 aaaaatagca aatgagctta taaatttagt cgatgagatt ttaaaagcca aagaacaaga
     3661 caaaaacgca aatacccaag aactagaaaa taaaatcaat tctttggttt ataaactcta
     3721 caatctcacc gaagatgaga taaaaatcat agaaggcaag taatggaaga tattataaaa
     3781 ataatacaat ggttttctga gttaagctca aaaattaaat taagcaataa acttaatttg
     3841 acagatataa atatttgttg tgaa
//
LOCUS       DAPWAA010000096         3845 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.096, whole genome shotgun sequence.
ACCESSION   DAPWAA010000096 DAPWAA010000000
VERSION     DAPWAA010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3845
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.096"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..870
                     /locus_tag="RTF91_001643"
     CDS             <1..870
                     /locus_tag="RTF91_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDZ4944498.1"
                     /translation="YTHYKLYKIKKELFSFKWNKNNVVIDSVLQNNYFLHEIKNNKNI
                     STFKLIHLDYDTFCKHCKYMKDLKHYNSLILLSNKQEYLWKKSNSNICNIPNLIPFIS
                     SKTSDLSQKVVLSIGRMSKEDQKGFLRLIDIWEIVQKDKKFKEWKLHIVGDGLLKEEL
                     FHKIKLKKLEYSIILLSCSKNIEEEYLKASIYVMTSHFEGFGMVLVESANYAIPSVAF
                     DINTGPSDIIDNEKSGFLIEDGNLQEFANKLKILMQDRSLRERFGKNAKEKVQKEFNK
                     EVIMQKWIRLINF"
     gene            complement(867..2060)
                     /locus_tag="RTF91_001644"
     CDS             complement(867..2060)
                     /locus_tag="RTF91_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDZ4944499.1"
                     /translation="MYNIIFSADENYIKYTAVLITSIIKSTNISNSFLDGAYHFHLLS
                     NFLSDNAKEKLEKLQNELSKIYPCKISIYIIKDDEFKNFPSSGAAHSSKLPYYRLKFI
                     SLLDSINKCLYLDSDMLCVCDIRELFYLDLKDNIIAAVGDPGSKRAKIKFIEDGKKRV
                     LKFDENYFNSGFLLINVKEYKKACIEQKCEELAKKCVYIKAADQDLLNATISKDKILK
                     LDFAYNFNIITLLYAICKDEKKNRLNYTREEFIQSMKNPKLLHYGEKPWKFLHSYKDF
                     YGKNINDYWWDIVEITPIFKEELLKQKKDIKDYLLYAGLGYTLYNFCKKYQIFNIKKL
                     LKIDNDKELMEPKDLNDDKYGLYCLLGEIVLYARKHKKGVVHIVLKSYKMIKMYEKYA
                     YKSKL"
     gene            complement(2053..3204)
                     /locus_tag="RTF91_001645"
     CDS             complement(2053..3204)
                     /locus_tag="RTF91_001645"
                     /inference="COORDINATES: protein motif:HMM:NF013652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDZ4944500.1"
                     /translation="MFHIILNLNDDYVKYASVLISSIVKNTDTSKTFAKICEENHNLT
                     HILTLKQYNKSEEEGYVFHILSDFISDKTRMKLEYLKENLAKIYPCDIKIYIINEDNF
                     GNFLHWKGNFVAYYRLMVGSILPPDIEKCLYIDADMLCFSDIRKLFLFDLEDKVLGAV
                     ADFATWNTRFLKFRKLKYLFKGFLKFSREYFNSGLLLIDLKEWRRQNIEKKCLDVLKY
                     YKCILPDQDALNIVIKENYIKLPLSFNCPTVCYATNYLNIICKDEISSFSKLDYFKEV
                     GMMYSKNELLEALNKPFFLHYSEKPWARYYFLNSNYQPIIYSKDVFSMWQKEAFEVLC
                     FKEDLILLKNKDFFQMNYIKFLAEKLSVIERKKYKLRRKLQILWDKINV"
     gene            complement(3216..>3845)
                     /locus_tag="RTF91_001646"
     CDS             complement(3216..>3845)
                     /locus_tag="RTF91_001646"
                     /inference="COORDINATES: protein motif:HMM:NF016908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HDZ4944501.1"
                     /translation="KQFEISVFFNKHGLYLFEEITLNNIKSKDIIDVGGFVGDSAIFF
                     EKEISLKNIYSFEATKSNYDLMLKTLKLNDSSRIIPINKGLGSKNEILNIMVNGGGSS
                     LIAQSINGDNTEQCEIITLDDFVKEYNIEVGFIKVDIEGFEQEFLKGAINTIKTQKPA
                     MLISIYHNYSDFFQIKPLIESWGLGYKFKIFKPVDGDISTETALMCEVV"
BASE COUNT         1475 a          539 c          366 g         1465 t
ORIGIN      
        1 tatactcatt ataaattata taaaataaaa aaagaattat tttcgtttaa atggaataaa
       61 aataatgtag ttatagatag tgttttgcaa aataattatt ttttacatga aatcaaaaac
      121 aataaaaaca taagtacctt taaattgata catcttgatt atgatacttt ttgcaaacat
      181 tgtaaatata tgaaagattt aaaacactac aattccttaa tcttattatc taataagcaa
      241 gaatatttat ggaaaaaatc aaatagtaat atttgcaaca tacctaatct tattcctttt
      301 atatcatcaa aaacaagtga tttatcgcaa aaagtcgtgc ttagcatagg aagaatgagc
      361 aaagaagatc aaaaaggttt tttaagactc attgatattt gggaaatagt gcaaaaagat
      421 aaaaagttta aagaatggaa gcttcatatc gtaggagatg ggcttttaaa agaagaatta
      481 tttcataaaa taaaacttaa aaaactagaa tactctataa ttttactctc ttgtagcaaa
      541 aatatagaag aagagtattt aaaggcaagt atttatgtaa tgactagtca ttttgaaggc
      601 tttggaatgg ttttagttga aagtgcaaac tacgcaattc caagcgttgc ttttgatata
      661 aatactggtc caagcgatat catagataat gaaaaaagtg gctttttaat agaagatgga
      721 aatttacaag aatttgcaaa taaacttaaa attttaatgc aagataggag tttaagagaa
      781 agatttggta aaaatgctaa agaaaaagta caaaaagaat ttaacaaaga agtgattatg
      841 caaaaatgga taagacttat aaatttttaa agttttgatt tataagcata tttttcatac
      901 attttaatca ttttatatga ttttaaaacg atatgaacca cacctttttt atgttttcta
      961 gcatataaaa ctatttcccc aagtagacaa taaagtccat atttatcatc atttaaatct
     1021 tttggttcca ttaactcttt atcattatct attttaagaa gtttttttat gttaaatatt
     1081 tgatattttt tacaaaaatt atataaagta tagccaagtc ctgcatacag caaataatcc
     1141 tttatatctt ttttttgctt taataattct tctttaaaaa taggtgttat ttctactata
     1201 tcccaccaat aatcattaat atttttccca taaaaatctt tgtaagaatg caaaaatttc
     1261 caaggttttt caccataatg taataatttt ggatttttca tgctttgaat aaattcttct
     1321 cttgtataat ttaatctatt tttcttttca tctttgcata tagcatataa aagtgtaata
     1381 atgttaaaat tataagcaaa atcaagtttt aaaattttat ctttagaaat agtagcgttt
     1441 agcaagtcct gatcagctgc tttaatataa acgcattttt tagctaattc ttcgcatttt
     1501 tgttcaatac aagctttttt atattcttta acattaataa gtaaaaaccc tgagttgaaa
     1561 taattttcat caaattttaa aactcttttt ttaccatctt ctataaattt aatttttgct
     1621 cttttacttc ctggatcacc tactgctgct atgatattat cttttaaatc taaataaaaa
     1681 agctctctaa tatcacacac acaaagcata tcagaatcta aatataaaca cttattaata
     1741 ctatcaagca aagaaataaa tttcaatcta taataaggaa gttttgagct atgtgctgca
     1801 cctgaacttg gaaaattttt aaattcatca tcttttataa tgtaaattga tattttacaa
     1861 ggataaattt tacttagttc attttgtaat ttttctaact tttcctttgc attatcactt
     1921 aaaaaattac ttaataaatg aaaatgataa gcaccatcta aaaaactatt actaatatta
     1981 gtacttttaa taatactagt aattaatact gcggtatatt ttatataatt ttcatcagca
     2041 ctaaagatta tattatacat ttattttatc ccataatatt tgcaattttc ttcttaactt
     2101 gtattttttt ctttcaatta cactcaattt ttcagccaaa aacttaatat aattcatctg
     2161 aaaaaaatct ttatttttta ataaaatcaa atcttcttta aaacacaata cttcaaatgc
     2221 ctctttctgc cacattgaaa aaacatcttt tgaatatatg attggttgat aatttgaatt
     2281 taaaaaataa tatctcgccc aaggtttttc tgaataatgt aaaaaaaagg gcttatttaa
     2341 agcctcaaga agttcatttt tactatacat catacctact tctttaaaat aatccaattt
     2401 agaaaaacta gaaatttcat ctttacaaat aatgttaaga taatttgtag cataacacac
     2461 tgtaggacag ttaaaagata aaggaagttt gatataattt tctttaatta ctatatttaa
     2521 agcatcttga tctggtaata tacacttata gtatttcaaa acatctaaac attttttctc
     2581 tatattttgc ctacgccatt cttttaaatc aataagcaat aatccagaat taaaatattc
     2641 tctagaaaat ttcaaaaaac ctttaaataa atattttaat tttctaaatt ttaaaaatct
     2701 agtattccaa gtagcaaaat cagcaactgc acccaaaact ttatcttcta aatcaaataa
     2761 aaataatttc cttatatcag aaaagcaaag catatccgca tctatataaa gacatttttc
     2821 tatatctggt ggcaatatag aacctaccat taatctataa taagctacaa aattaccctt
     2881 ccaatgtaaa aaatttccaa aattatcttc atttataata taaattttta tatcacaagg
     2941 atatattttt gctaaatttt cttttaaata ctctaatttc attcttgttt tatctgaaat
     3001 aaaatcgctt aaaatatgaa aaacatatcc ttcttcttcg cttttattat actgttttaa
     3061 tgttaggata tgcgttaaat tatgattttc ttcacaaatt ttagcaaatg ttttgcttgt
     3121 atcagtattt tttactatac tagaaattaa aacagaagca tattttacat aatcatcatt
     3181 aagatttaaa ataatatgaa acatcaattt aacctctaaa caacttcaca cataagtgct
     3241 gtttctgtgc taatatctcc atctactggt ttaaatattt taaatttata tcccaaaccc
     3301 caagattcta tcaaaggttt aatttgaaaa aagtcagaat aattatgata aatactaata
     3361 agcatagcag gcttttgcgt tttaatcgta ttaatcgctc cttttaaaaa ttcttgctca
     3421 aaaccttcta tatctacttt aataaaacca acttctatat tatattcttt tacaaaatca
     3481 tctaaagtta ttatttcaca ttgttcagta ttatcaccat ttatactttg agcaattaaa
     3541 ctagatccgc caccatttac cataatattt aaaatttcat tcttacttcc taatccttta
     3601 ttgatcggaa taattcttga agaatcattt aattttaaag ttttcaacat taaatcataa
     3661 ttacttttag ttgcctcaaa actataaata ttttttagac taatttcttt ttcaaagaaa
     3721 atagcactat caccaacaaa accaccaaca tcaataatat ctttgctctt aatattattt
     3781 aaagttatct cttcaaataa atataaaccg tgtttattaa aaaaaacact aatttcaaat
     3841 tgttt
//
LOCUS       DAPWAA010000097         3830 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.097, whole genome shotgun sequence.
ACCESSION   DAPWAA010000097 DAPWAA010000000
VERSION     DAPWAA010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3830
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.097"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..205)
                     /locus_tag="RTF91_001647"
     CDS             complement(<1..205)
                     /locus_tag="RTF91_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944502.1"
                     /translation="MNQNNNKILKNELEDLQYELSIVLEAMLLYAGVKREKLENAIEA
                     YIDNIDNVLENSNKEGVDEILEVI"
     gene            complement(189..1235)
                     /locus_tag="RTF91_001648"
     CDS             complement(189..1235)
                     /locus_tag="RTF91_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HDZ4944503.1"
                     /translation="MKIYHLSHTDLDGYACQFVVNFYFRNVKFYNSNYGKEINENFNS
                     IVNDIEKDENFGKAIILITDLNLNLNQCEEFEKICKEKNIKIFLLDHHQSGEECAQKY
                     SWYLLDSKRCATKIVYDFFSKICTPVLELSKFVDVVNAVDIWLSEDENFELGKVFLGL
                     IANAKEINRVMFKELQIAYMFFLLDKAWKFIGKENANILLDNATHFIKKDYFVRNNDD
                     TLSNLISYFIVEKLSELKENFSIEYEGHKGILTSNIGNTSVIGNDFLVKNPDYDFFID
                     VSSRKTLSFRANGKIDVSLMAKNLVGGGGHKNASGGLFATFKDGTNYNHIKAQIIDLI
                     KSKELKRGNNESKQ"
     gene            complement(1244..3415)
                     /gene="flhA"
                     /locus_tag="RTF91_001649"
     CDS             complement(1244..3415)
                     /gene="flhA"
                     /locus_tag="RTF91_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HDZ4944504.1"
                     /translation="MAKNKIVDLVFPFLGPLIAPILRAKSLTIVGFLVCILAIIIVPL
                     PSPILDFFLALSIALSVLIILISIYIPKPTDLTTFPTLILIITLFRLSLNIATTRMIL
                     SEGQNGPEAVSEIIAAFGEFVVGGNMVIGVIVFCILVLINFMVVTKGSTRVSEVQARF
                     TLDAMPGKQMAIDADLNAGLIDEQTARARRQEVIAEANFYGAMDGSSKFIKGDAVAGI
                     IITIINIIGGFLIGSFQHDMTLSNAASTYTILTIGDGLVSQIPGLITSTATAIIITRA
                     SKDEENFAEGTLTQLLSEYRTLLIVGFVLFIFALVPGLPTLSLGFMALVFLSLGYLTK
                     QVKEGKIDINTTKKSKPSAAAASQSGVDGIAAPTKKSEEEILKEEEHKINDILKVEIL
                     ELELGYGLIKLAENELTERIRSMRRSIAESLGFLMPKIRIRDNLRLKPNEYSFKLKGV
                     SIASAEIYPDKYLAMDSGFITEEIEGIATKEPAFNSDALWIDANLKDEATLNGYIVID
                     PASVISTHMSELIKAHASELLTRQEVQNLLDKVKNDYPIIVESALGVAPVSLIQKILK
                     DLLKNHIPIKDMLTILESVSDIAEVSKSFDMIIEHVRASLARMITNMYLDDKGNLDIF
                     ILDSASSAVLMENVQFRDGSYHLPLSVAQTGTLVDTLRAEVAAVANGRIKPFILCVEP
                     QLRKFIADICYNFSINIVVLSFAEIAENTNFNTEGIIRIEL"
     gene            complement(3402..3812)
                     /locus_tag="RTF91_001650"
     CDS             complement(3402..3812)
                     /locus_tag="RTF91_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RrF2 family transcriptional regulator"
                     /protein_id="HDZ4944505.1"
                     /translation="MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKIL
                     QTLAKDGLLKSFKGAKGGFVLIKEPSQYTIKEIVNSAEKKDISVFECSGGTCPNNKEE
                     NCTLMPMLVNLQNKVDEFLDSITLEDIMKNNGKK"
BASE COUNT         1299 a          686 c          480 g         1365 t
ORIGIN      
        1 ctatcacttc taaaatttca tcaactcctt ctttgttaga attttcaagt acattatcta
       61 tgttatcaat ataagcttct attgcatttt ctaatttctc tcttttaact ccagcatata
      121 aaagcatagc ctctaaaact atactaagct catattgtaa atcttctagt tcattcttta
      181 agattttatt attgttttga ttcattattt ccccttttaa gttctttgct tttgattaaa
      241 tcaataattt gagcttttat atgattataa tttgttccat ctttaaatgt agcaaaaagt
      301 ccaccactag catttttatg tccaccgcca cctactaaat ttttagccat taaacttaca
      361 tctatttttc catttgcacg aaaacttaag gtttttctag aacttacatc aataaaaaaa
      421 tcataatcag gattttttac taaaaaatca ttcccgataa cagaagtatt gcctatgttt
      481 gaagttaaaa tacctttgtg accttcatat tctatactga aattttcttt taattcactt
      541 agcttttcga ctataaaata agaaattaaa ttagaaaggg tatcatcatt atttctgaca
      601 aaataatctt tttttataaa atgagtagca ttgtcgagta aaatattggc attttctttt
      661 cctataaatt tccaagcttt atcaagcaag aaaaacatat aagcaatttg caattcttta
      721 aacataacgc gatttatttc ttttgcattg gcaatcaagc ctaaaaaaac ctttccaagt
      781 tcaaagtttt catcctcact taaccaaata tccacagcat tgactacatc aacaaatttt
      841 gaaagttcta aaactggcgt gcaaatttta gaaaaaaaat cataaacaat tttagttgca
      901 catcttttag aatcaagcaa ataccaagaa tatttttgag cacattcttc gccactttga
      961 tgatgatcaa gaagaaagat tttgatattt ttctctttgc aaattttttc aaactcttca
     1021 cattgattta aattcaaatt taaatctgtt attagaataa tagcttttcc aaaattttca
     1081 tctttttcta tatcatttac aatggagtta aaattctcat taatctcttt accataatta
     1141 gaattataaa attttacatt tctaaaataa aaatttacta caaattgaca agcataaccg
     1201 tcaagatctg tgtgtgaaag atgataaatt ttcattattt tccttaaagt tctatcctaa
     1261 taataccttc agtgttaaaa tttgtatttt ctgcgatttc tgcaaaactt aacacaacta
     1321 tattaatgct aaaattataa caaatatcag caatgaattt tctaagttgc ggttcaacgc
     1381 aaagtataaa aggtttaata cgaccatttg ctactgcagc aacttcagct cttagagtgt
     1441 ctactaaagt ccctgtttga gccacgctta aaggcaagtg atagcttcca tctctaaatt
     1501 gtacattttc cattaaaacc gcagaactgg cagaatctag gataaaaata tctaaatttc
     1561 ctttatcgtc taaatacata ttcgtaatca ttctggctaa agatgccctt acatgctcaa
     1621 taatcatatc aaagctcttg cttacttctg ctatatcgct tacagattct aagatggtaa
     1681 gcatatcttt aataggtatg tgattcttaa gcaagtcttt aagaattttt tgaataagac
     1741 ttacaggtgc aacacctaaa gcactttcta caatgattgg ataatcattt ttaaccttat
     1801 caagaagatt ttgcacctct tggcgtgtaa gaagttcact tgcatgcgcc ttgataagtt
     1861 cgctcatgtg tgttgaaata acacttgcag gatctattac tatataacca tttaaagtgg
     1921 cttcatcctt taaattcgca tcaatccaaa gtgcatcaga gttaaaagcg ggctcttttg
     1981 tggcaattcc ttctatttct tctgtaataa aaccactatc catggctaaa tatttatcag
     2041 gataaatttc agcacttgct atggaaacac ctttaagttt aaaactatac tcatttggct
     2101 tgagtcttaa attatccctt attctaattt ttggcatcaa aaatcctaaa ctttcagcaa
     2161 tgcttcttct cattgaacga attctttctg taagttcgtt ttcggcaagt ttaataagtc
     2221 catatccaag ttcaagttct aaaatttcga ctttgagtat gtcattgatc ttatgttctt
     2281 cttctttaag aatttcttct tcacttttct ttgtaggtgc tgctattcca tctactccac
     2341 tttgagatgc agctgcagca cttggtttgc tttttttagt tgtatttata tcaattttac
     2401 cttctttaac ctgcttagta agataaccaa gacttaaaaa aactaaagcc ataaaaccca
     2461 aagataaagt tggtaaacca ggtactaatg caaagataaa aagcacaaaa cctactatta
     2521 aaagtgtgcg gtattcgctt aaaagttgag ttaaagttcc ttcagcaaaa ttttcttcat
     2581 ctttacttgc acgagtgata attatagcag ttgcagtaga agtaatcagg ccaggaattt
     2641 gcgatacaag tccatcacct atagttaaaa tagtataagt agaagcagca ttacttaaag
     2701 tcatatcatg ctgaaaagat cctattaaaa aaccgcctat gatatttata attgttatga
     2761 taattcctgc aacggcgtct cctttgataa atttagaaga accgtccatc gcaccataaa
     2821 aatttgcttc agcaataact tcctggcgtc ttgctctagc ggtttgttca tctataagtc
     2881 ctgcatttaa atctgcgtca atagccattt gtttacctgg catcgcatca agtgtaaatc
     2941 ttgcttgtac ctcagaaacc cttgtactac cttttgttac aaccatgaaa ttaatcaaca
     3001 ctaagataca aaatacaatc acaccaatga ccatatttcc accaacaaca aattctccaa
     3061 atgctgctat aatttcactc acagcttcag ggccgttttg cccttcgctt agaatcattc
     3121 ttgtagtggc tatatttaat gaaagtctaa ataaagtaat gatcaagatt aaagttggaa
     3181 aagttgttaa atctgttggt ttaggtatat aaatagaaat taaaataatc aataccgata
     3241 aagctatact taaagccaaa aaaaagtcta aaataggact tggtaaaggg actataataa
     3301 tagccaaaat acaaactaaa aaaccaacta tagttaagct tttggctctt aaaatagggg
     3361 caattaaagg ccctaaaaaa ggaaaaacta aatcaactat tttatttttt gccattattt
     3421 ttcataatat cttctaaagt aatagaatct aaaaattcat ccactttatt ttgcaaattt
     3481 accaacatag gcatcaaagt acaattttct tctttattat ttggacatgt accaccgcta
     3541 cattcaaata cactgatatc ttttttttca gcactattga caatttcttt tatagtgtat
     3601 tggcttggct ctttgattaa aacaaaacca ccttttgcac ctttaaaaga ttttaataaa
     3661 ccatccttag ctaaagtttg taaaatttta gctaaaaaac ttttgggaat gtcaagctct
     3721 aaagctaaag aatctacatc ttgaggtgtt tctttttgag aaatataaat taaagaaagt
     3781 aaagcgtatt cgctagcttt agtaaacagc acagattctc cttattttaa
//
LOCUS       DAPWAA010000098         3813 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.098, whole genome shotgun sequence.
ACCESSION   DAPWAA010000098 DAPWAA010000000
VERSION     DAPWAA010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3813
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.098"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..1659
                     /locus_tag="RTF91_001651"
     CDS             <1..1659
                     /locus_tag="RTF91_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDZ4944506.1"
                     /translation="KNLLLVKMIENIAIPLWNKYGMDSQNYIDKMKNLFSEYLNKKKL
                     DEDTINQYIQVIENISKEFLKENLYSCDLFSFNQNINKLNKNEEFKLKNSNGSNMYSS
                     ALNYYRAFLIDYYEQDIFITERVQSEESNMKIIPLNQILYGSPGTGKTYTTIDKALEI
                     LGENLESRDDKKAKFDEYVKNGQIVFTTFHQSYGYEEFVEGIKPRIDSEENSKEIKYE
                     IKDGIFKELCEKALENRDSIKNFNFYIDKLKEKAKIDDNNPEKYFELPNTKYSIQYRN
                     GKTFRIKFDDMSKNHKDYPVSIDNIEKLYKTSNIDEIYNSAYVRAILNYLKLQGLEDY
                     KEKDEKTNLPYIIIIDEINRGNVSKIFGELITLIEPSKRIGAKEELKVILPYSGKEFG
                     VPKNVYIIGTMNTADRSITSLDTALRRRFEFIEMMPDVSKLSIDCEGINLQELLKAIN
                     TRIEYLLDREKTIGHAFFISVENLESLKKVFKNKIIPLLQEYFYNDYALIDAVLNKNG
                     MLEISVENKDYLKNMTEFIDSDKIVYKFSDSNNWSKDTFIKIYE"
     gene            1659..2996
                     /locus_tag="RTF91_001652"
     CDS             1659..2996
                     /locus_tag="RTF91_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="McrC family protein"
                     /protein_id="HDZ4944507.1"
                     /translation="MKTSNTFSIIEHQAFSKEDLKEIFKEKAEGFYKELEDFAKNNES
                     LLGFKNKNTLKAKNYVGIIQTKSGVLEILPKCTNLESYKLEEGCSRHDKEKLKKWYDL
                     SQNFKNDDFYEKDFKFNPKNLLINMLKTLKNSSFKKSQISSLQSSKIPLFEVFITMFL
                     DEFDSVYKKGLMRSYLSCEENRAFLKGKLLFNEHIKQNLIHKERFFTSSDEFVLDIAP
                     NRLIKSTLNFLKSKTSLNKFRLIKAMQILDEVEFSKNYEKDFSYTISRHFDYYENLLL
                     WCKIFLKNESFMPYHGKNEAFALLFPMEKIFEDYVAYMLKKVNPTQDIKVQNNGKYLI
                     SKNDENCFMLKPDLYIKNKMILDTKWKIPNDSEDEKKQGIAQSDLYQMFAYACKFKIY
                     DIKLVYPLCEKTQDLQRKIAEKFFVFNASKHLYFKEQGQKDIKVQVCFAPLPF"
     gene            complement(2985..3788)
                     /locus_tag="RTF91_001653"
     CDS             complement(2985..3788)
                     /locus_tag="RTF91_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDZ4944508.1"
                     /translation="MLEILNFTFFQNALLGAILVSIACGIIGTLAMINRLFSMAGGIT
                     HGAFGGIGIAFYFSLPILLSTGIFTLFLAFLVAFLAKHYEHRSDSIIAVIWAFGMAVG
                     IILIDLSPSYNTDLMAYLFGSILAVGTQDLWLMALVDVGVIVLMLLFYRQFEALSFDA
                     EFAKVRGINANFFHYLLIALMAFCIVISIRLVGLILVMALLSIPSFIAENFTKRLGFI
                     MILASFLSMIFCVLGLILSYYLNLSSGACIIAVACFGFLMHLIGKFLKR"
BASE COUNT         1625 a          441 c          568 g         1179 t
ORIGIN      
        1 aaaaatttat tattagttaa aatgatagaa aatatagcta ttcctttatg gaataaatat
       61 ggcatggata gtcaaaatta tatagataaa atgaaaaatt tatttagtga atatttaaac
      121 aaaaagaaat tagatgaaga tactataaat cagtatattc aagttataga aaatatatca
      181 aaagaatttt taaaagaaaa tctatatagc tgtgatttat ttagttttaa tcaaaatata
      241 aataaattaa ataaaaatga agaatttaag ttaaaaaaca gcaatggaag caatatgtat
      301 tctagtgcat tgaattatta tagagctttt ttgattgatt attatgaaca agatattttt
      361 ataactgaaa gagtgcaatc tgaggaatca aatatgaaaa ttataccctt aaatcaaatt
      421 ctttatgggt ctccagggac gggaaaaact tatactacta tagataaagc tttggaaatt
      481 ttgggcgaaa atttagaaag tagagatgat aaaaaagcaa aatttgatga gtatgtgaaa
      541 aatggacaaa tagtctttac aacttttcat caaagctatg gatatgaaga atttgtagaa
      601 ggtataaagc ctcgcataga tagtgaagaa aattctaaag aaataaaata tgaaataaaa
      661 gatggaattt ttaaagaact ttgcgaaaaa gctttagaaa atagggatag tataaaaaat
      721 tttaattttt atatagataa attaaaagaa aaagcaaaaa tagatgataa taatccagaa
      781 aaatattttg aattaccaaa tactaaatat tctattcaat atagaaatgg aaaaacattt
      841 agaattaaat ttgatgatat gagtaaaaat cataaagatt atccagtcag tatagataat
      901 atagaaaaat tatataaaac ttctaatata gatgaaatat ataattcagc atatgttaga
      961 gctatattaa attatttaaa attgcagggt ttagaagatt acaaagaaaa agatgaaaaa
     1021 acaaatttac cttatataat catcatagat gagattaatc gtggtaatgt aagtaagatt
     1081 tttggtgagc ttataacctt gatagagcct agcaaaagga taggtgcaaa agaagagtta
     1141 aaagtgattt tgccttatag tggcaaagaa tttggagtgc ctaaaaatgt ttatatcata
     1201 ggtaccatga atacagccga tagaagcata acttctcttg atacagcttt aagaagaaga
     1261 tttgaattta ttgagatgat gcccgatgtg agcaaattat ctatagattg tgaaggtatt
     1321 aatttacaag aattattaaa agctataaac actcgtatag aatatttact agatagagaa
     1381 aaaaccatag gtcatgcatt ttttataagt gttgaaaatt tagaaagttt aaaaaaggtt
     1441 tttaaaaata aaattatccc acttttgcaa gagtattttt acaatgacta tgctttgatt
     1501 gacgcagttt taaataaaaa tggtatgttg gaaattagtg ttgaaaataa agattattta
     1561 aaaaatatga cagaatttat agatagtgat aagattgttt ataaatttag tgatagtaat
     1621 aattggagta aagatacttt tataaaaata tatgaataat gaaaacaagt aatacttttt
     1681 ccatcatcga acaccaagct ttttctaaag aagatttaaa agaaattttc aaagaaaagg
     1741 ccgaagggtt ttataaagag ctagaagact ttgcaaaaaa taatgaaagt cttttaggct
     1801 ttaaaaacaa aaatacctta aaagctaaaa attatgtagg cattatccaa actaaaagcg
     1861 gagttttgga aattttgcca aaatgtacaa atttagaaag ctacaagtta gaagagggtt
     1921 gttcgaggca tgataaagaa aaattaaaaa agtggtatga tttaagtcaa aattttaaaa
     1981 atgatgattt ttatgaaaaa gattttaaat ttaatcctaa aaatcttttg ataaatatgc
     2041 taaaaacctt aaaaaactcc tcctttaaaa aatcgcaaat ttcatctttg caaagttcta
     2101 aaattccttt atttgaagtg tttatcacta tgtttttaga tgaatttgat agcgtgtata
     2161 aaaaaggctt gatgagatct tatctaagtt gcgaagaaaa tagggctttt ttaaagggaa
     2221 aattactatt taacgagcat atcaagcaaa atttgataca caaagaaaga ttttttacaa
     2281 gcagtgatga gtttgtttta gatatagcac ccaatcgttt gataaaatca acgctaaatt
     2341 ttttaaaatc caaaacaagt ttgaataaat ttagacttat aaaagccatg caaatacttg
     2401 atgaggtaga attttctaaa aattatgaaa aagattttag ctatacaatt tcaagacatt
     2461 ttgattatta tgaaaacttg cttttgtggt gtaaaatttt cttaaaaaat gaaagtttta
     2521 tgccttatca tggtaaaaat gaagcttttg ctttgctttt tcctatggag aaaatttttg
     2581 aagattatgt agcttatatg ctaaaaaaag taaatccaac tcaagatatt aaagtccaaa
     2641 acaatggaaa gtatctaatc tcaaaaaatg atgaaaattg tttcatgtta aagcctgatt
     2701 tatatataaa aaataaaatg atcctagata ccaaatggaa aattccaaat gatagtgaag
     2761 atgagaaaaa acaaggtata gcacaaagcg atttgtatca aatgtttgct tatgcttgca
     2821 aatttaaaat ttatgatatt aaacttgtgt atcctttatg tgaaaaaact caagatttac
     2881 aaagaaaaat tgcagaaaaa ttttttgttt ttaacgcaag caagcatttg tattttaaag
     2941 aacaagggca aaaagatata aaagtgcaag tgtgttttgc acctttacct ttttaaaaat
     3001 ttgcctatca aatgcattaa aaaaccaaag caagctacag ctatgatgca agcaccgctt
     3061 gagagattaa gataatagct aagtataagc cctaaaacac aaaaaatcat acttaaaaaa
     3121 cttgccaaaa tcatgataaa gccaagtctt ttagtgaaat tttcagcaat aaagcttggg
     3181 atactaagta aagccataac taaaataagc cctacaaggc gtatagaaat aactatacaa
     3241 aaagccataa gggcgattaa aagataatga aaaaaatttg cattgatacc acgaactttt
     3301 gcaaattcag catcaaaact taatgcttca aattgtctat aaaataaaag cattaaaaca
     3361 atcacaccca catcaaccaa agccataagc cataaatctt gtgttcctac agccaaaata
     3421 cttccaaaaa gataagccat taaatctgtg ttataactag ggcttaaatc gattaaaata
     3481 atccccacag ccattccaaa agcccaaatt acagcaataa tgctatcgct tctgtgttca
     3541 tagtgtttag ctaaaaaagc tactaaaaaa gccaaaaata aagtaaatat ccccgtgctc
     3601 aataaaatag gtaaagaaaa ataaaaagct atgcctattc cgccaaaagc cccatgtgtt
     3661 atacctccag ccatagaaaa aaggcgattt atcattgcta aagtgcctat gatcccgcaa
     3721 gctatactga ctaaaattgc tcctaataaa gcgttttgaa aaaaggtgaa atttaaaatt
     3781 tcaagcatta ttttcctttg aaaattttaa aca
//
LOCUS       DAPWAA010000099         3670 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.099, whole genome shotgun sequence.
ACCESSION   DAPWAA010000099 DAPWAA010000000
VERSION     DAPWAA010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3670
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.099"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(102..1448)
                     /locus_tag="RTF91_001654"
     CDS             complement(102..1448)
                     /locus_tag="RTF91_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate transporter"
                     /protein_id="HDZ4944509.1"
                     /translation="MEIFLALLGFFSLGLIVWLLLKDYTTPALAFISVSISVACVLLI
                     LEQLGFGVGVALGVKGGVFDIKTLVAFVKDGVKSVTDTAALFVFSILFFSVLNASGFF
                     TKILNAFLSKMKANVYQVCILTVFIAAAVHLDGSGASTFLIVIPALLPIYERLGIRKT
                     SMLLIITSAMGVMNVIPWGGPTLRAAANIGMDANLLWHHIIPIQIVGLVLSLLLAIWI
                     ARIEIKRGAGACNLSGINLNIEKSEHHNEKWFWLNLLVAIGVIGLLISGIIPSYICFM
                     IGLAIILPFNYPNLKIAKKVLDRASGGAILMYITLIGAGILIGVFDKSGIMEKMGVLI
                     LNFVPDYLGAYIPLMIGILAVPMAIIFCTDSYFYGVMPIVLSITKAFGVEPLTIAIIM
                     VIARNCATFISPVVPATLLGCGLAEVNIKDHIKRSFFYIWGISIICLIFAEVAGII"
     gene            1641..1909
                     /locus_tag="RTF91_001655"
                     /pseudo
     CDS             1641..1909
                     /locus_tag="RTF91_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851872.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4878 domain-containing protein"
     gene            1893..2335
                     /locus_tag="RTF91_001656"
                     /pseudo
     CDS             1893..2335
                     /locus_tag="RTF91_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343659.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2399..2746
                     /locus_tag="RTF91_001657"
     CDS             2399..2746
                     /locus_tag="RTF91_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944510.1"
                     /translation="MKKSILLVSALLTSSILLADSLKLEGTIAQIYDNNKTLLIDSIY
                     GGQVAIKVLPNTEIEMDDCGIFGTDKDGTFKDLQVGNFLESKISYGTPATPNAQAIPV
                     ARKIEIQCYKKAY"
     gene            2875..>3670
                     /locus_tag="RTF91_001658"
     CDS             2875..>3670
                     /locus_tag="RTF91_001658"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944511.1"
                     /translation="MKKWIFIVFCFILGFIIHIFYIGYTNELLFNKLSKNNNPNYQIT
                     DIWFKKGFLTSKGSFTLNNSHAQLSTKINLKFNNYFFLNKIIKGELTNPFNFLDEVLK
                     NNKLGTFTLKLHDNNAKIFLNIKDINLSNEGGDTIINGGYIEALMNKNLEIKNIKMHF
                     DIIDFSQFYTKFLLQNLDYEQFFNNPVQFYNFNLFGDSKQEISFDYLMLDNNKINSFY
                     SKNQVKLSKENSTVNLNIQGKSNEINIDLKPLLGQNLNFDKTKFNIT"
BASE COUNT         1464 a          596 c          411 g         1199 t
ORIGIN      
        1 taatacaaaa aaacgcttat atttttataa atttttgact caaaaatatc ataatacaat
       61 ggcaattgat catcagaaaa ttaaaagttc ttttatttta attatattat cccagccacc
      121 tcagcaaaaa tcaaacaaat aatacttatg ccccatatat aaaaaaagct tcttttgata
      181 tgatctttaa tattaacctc tgctaaacca caacctagca aagttgcagg cacaacagga
      241 gaaataaatg tcgcacaatt tcttgctatt accatgataa tagctatagt tagaggttca
      301 acaccaaaag ccttagttat actcaaaact ataggcatca ctccataaaa ataagaatct
      361 gtacaaaaaa taattgccat tggaacagct aatatcccta tcattaaagg aatataagca
      421 cctaaataat ccggaacaaa atttaaaatc aaaacaccca ttttctccat aataccactt
      481 ttatcaaata cgcctatcaa tatcccagca ccaattaagg taatatacat aagtattgca
      541 ccaccgcttg cacgatctaa aactttttta gctattttta aattaggata attaaacggt
      601 aaaattattg caagtcctat cataaagcaa atataactag gaataatacc actaattaaa
      661 agcccaataa ctccgatagc tacaagcaaa tttagccaaa accatttttc attatggtgt
      721 tcgctttttt ctatatttaa atttattcct gacaagttac acgcacctgc acctcttttt
      781 atctctatcc tagcaatcca aattgccaaa agaagagaca atactaaacc cacaatctga
      841 ataggtataa tatgatgcca aagcaaattt gcatccatcc ctatattagc agctgctctt
      901 aaggtaggac caccccaagg aataacattc ataaccccca tagctgaagt aataatcaac
      961 aacatcgaag tctttcttat acctaaacgc tcataaatag gcaatagtgc aggtattacg
     1021 ataagaaaag tagaagcacc tgaaccatct aaatgtacag cagcggcaat aaaaacagta
     1081 agaatgcaaa cttggtatac attagctttc atttttgata aaaacgcatt taaaatttta
     1141 gtaaaaaaac cactcgcatt taaaacacta aaaaagagta tagaaaaaac aaacaaggct
     1201 gccgtatccg ttacgctttt aaccccatct ttaacaaaag caaccaatgt tttaatatca
     1261 aaaacacctc ctttaactcc taaagctaca cctacaccaa aaccaagctg ctcaagaatg
     1321 agcaaaacac aagctacact aatacttacg cttataaaag ctagtgctgg agtagtataa
     1381 tcttttagca aaagccaaac tatcaatcct aacgagaaaa aacccaataa agctaaaaaa
     1441 atttccatat cctagtcctt atgcatcatt tttatttgat aataaaatag gacattttaa
     1501 atccaactta tatgtgttca aatttatact tttttgaaaa aaatatattt tctaatgtaa
     1561 ccatattaaa caagaataaa aaaataattt ttaattattt ttgctataaa tacggatatt
     1621 ttaatttata ctatacagta gtggcttgtg gttctttaaa tcctaaagat atagctaaaa
     1681 attttacaaa agatttttac agcagtgatg ctaaatctgt tatgagctac attgatctta
     1741 gcgaaaagaa aaaacatctg ttaatggtaa aatcactcaa gtttttactg aaaatgcagc
     1801 taaagcaaaa agaatgggcg gtgctaaaga tattcaaaat gataataatc aaagcaccaa
     1861 tatttctctt gctaaaaaag acagaaaacg acttgtttta cttaaataaa attttatatt
     1921 ttttcttaat tttattttta ttaattggaa tttgggtttc tttgctagat tccaatcctt
     1981 caaaccaaat catcaaaaaa cctcatctac cttctcttga aataggctat cttgtttttc
     2041 gtgtaggaat aggaagtgaa agttttttga tagaaaattt aagtaaaagc ccttattctc
     2101 atatcgctat ggtagtaaaa cctctccaaa tcatactcat acatgccaca acagatgatg
     2161 ataaaaatgc tttttactca ctatttttta gaaaattcca ttaactctat cattccattt
     2221 catattcaat atactttaaa ttaaagctcc ttttaatgaa ggtttatatc tttatttccg
     2281 taaatttttt gaaaataatc aaaacgtatt aatttataaa agtcaaaatt tttaacttca
     2341 cattcacttc actcaaaaat tttataatgc caacatttta aattaaggag aaataattat
     2401 gaaaaaaagt attttacttg tatcagcact tttaacaagc tcgatacttt tagcagatag
     2461 tctaaaactt gaaggtacta ttgcacaaat ttatgataac aataaaacct tgcttattga
     2521 ctcaatttat ggcgggcaag tagccataaa agttctacca aatactgaaa tagaaatgga
     2581 tgattgtggc atttttggaa cagataaaga tggaactttc aaagatttgc aagttggaaa
     2641 ttttttagaa agcaaaattt cttatggaac acctgctacg ccaaatgctc aagctattcc
     2701 agtagctagg aaaattgaaa ttcaatgtta taaaaaagct tattaatccc ttattaaggg
     2761 attaataaaa gattattttt ctacaccact tcattactct taaataaaaa atttaaactc
     2821 ttttttaaca agcagtttat aaaataacat ttatattttt acccaaggcg aataatgaaa
     2881 aaatggattt ttattgtctt ttgttttata ttaggtttta ttattcatat attttatata
     2941 ggatatacta acgaactttt atttaacaaa cttagcaaaa acaacaatcc taattatcaa
     3001 attacagata tttggtttaa aaaaggtttt ttaacttcca aaggaagctt tactttaaat
     3061 aattctcatg cacagctttc aaccaaaatc aatcttaaat ttaataatta ttttttctta
     3121 aacaaaatta taaaaggaga acttacaaat ccttttaatt ttttagatga agtattaaaa
     3181 aataataaat taggaacttt tactctcaaa ttacacgata ataatgctaa aatatttcta
     3241 aatattaaag atataaattt aagcaatgaa ggtggagata ctatcataaa tggaggatat
     3301 atcgaagctt taatgaataa aaatttagag attaaaaata ttaaaatgca ttttgatatt
     3361 attgattttt ctcaatttta cactaaattt ctcttgcaaa atttagatta tgaacaattt
     3421 tttaacaacc cagtacaatt ttataatttc aatttatttg gcgatagcaa acaagaaatc
     3481 agctttgatt atcttatgtt agataataat aaaataaatt ctttttacag caaaaaccaa
     3541 gtaaaactta gtaaagaaaa ttcaacagtg aacttaaaca tacaaggaaa atccaatgaa
     3601 attaatattg atcttaaacc tttattaggc cagaatttaa attttgacaa aacaaaattt
     3661 aatataacta
//
LOCUS       DAPWAA010000100         3653 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.101, whole genome shotgun sequence.
ACCESSION   DAPWAA010000100 DAPWAA010000000
VERSION     DAPWAA010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3653
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.101"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..475
                     /locus_tag="RTF91_001659"
     CDS             <1..475
                     /locus_tag="RTF91_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HDZ4944512.1"
                     /translation="EYQKYNIGELDLEVFKLKFIQFAKNEKEHFSQGFYVAHTELELN
                     NILKLGTDKIKLKGTIDRIDSSKEGNLIIDYKSGKVPSNSYQLAFYQALYDQNASVSF
                     YDLNSMQMLHQKAKSLDELKERLKDLFLMSKEEIEFENEQDGYCPYQLIYKKELK"
     gene            472..3246
                     /locus_tag="RTF91_001660"
     CDS             472..3246
                     /locus_tag="RTF91_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecB-like helicase"
                     /protein_id="HDZ4944513.1"
                     /translation="MSQFEPFLALESSAGSGKTFALSVRFVALILKGAKINEILALTF
                     TKKAANEMQKRIVETFLNLEKENKTSECNELCKLLDKSKKELISLRDTKKEEFLRTEL
                     KISTFDAFFGKILRVFALNLGLSSDFTMSEEKLDVREIFLKLLKKDELKDLAYYINLV
                     DEKENFFNELEKFYENAYFQNYPKIPNPSKAYINKAYSELRTYCLSLTHVKNYNYLCN
                     NFKSEVLDLAEFMKSSFMEKFKSTKYLQDLQNIDLHFSTKRMELINALNAYAIELENY
                     KIANLMNLLNHYNEAKNILHKDKNTLNFQDVSKKVYELITSDFKDMIYFRLDGFISHL
                     LIDEFQDTSVIQYQILRPLIAELVSGEGVKKNRTFFYVGDKKQSIYRFRKGKKELFDL
                     LKQEFIQIKSDNLNTNYRSKELLVDFVNETFKEKIKDYKEQFALESKKGGFVRIVESK
                     EQKVKNQAQEIKEKTLKTLLGQINFLRSKNISYDDICILCWKNNDADMVLDFLREQKI
                     PAFTQSNVLLENKASVRLVLEYAKYCIFGDAFYLVFLKELLGFKPRKITLDFSKNAME
                     NVLFLIKELKLDLNDIALIQFIEHAKTKENFLKLLFEPCTLKIVSEQNVGISIMSVHK
                     SKGLEFDHVILLDSLSKNNPNNENIMLEYDINQGWQLHIKDKIREVTKEPIYTLFKEN
                     IARANYEDDINKLYVAFTRAKESLIVIKRNEECVNGHYPSYFKGEFLNIASQERGFLE
                     SKEQISSVKKESLQNLQKFEKIALQEVQSEERLGSKEMYFGNAFHFFMQNLKLPKGEN
                     FQTLIQQCRSNFRHFLDESDFEKLFKRIEILLKNTQFQALINDKKLLKEQTLSFNGEI
                     KQLDLLALKDEEAFIIDYKTGLAMQDKHKDQVRTYKIAISEILKKDKVRAFVIYCLED
                     KILIEELIEE"
BASE COUNT         1434 a          379 c          599 g         1241 t
ORIGIN      
        1 agaatatcaa aaatacaata tcggtgaact tgatcttgaa gtatttaaat taaaatttat
       61 acaatttgct aaaaatgaaa aagagcattt ttcacaaggt ttttatgtgg cacatacaga
      121 gcttgagtta aataatattt taaaacttgg aacagataag atcaaactta agggtactat
      181 agatcgcatt gatagttcta aagaaggcaa tttgattatt gattataaaa gcggaaaagt
      241 gccaagcaat tcttatcaac ttgcttttta tcaagctttg tatgatcaaa atgcgagcgt
      301 gagtttttac gatttaaata gtatgcaaat gttgcatcaa aaggctaaaa gcttagatga
      361 gcttaaagag agactgaaag atttattcct tatgagcaag gaagaaatag aatttgaaaa
      421 tgaacaagat gggtactgtc cttaccaact tatttataaa aaggaattaa aatgagccag
      481 tttgaacctt ttttagctct agaatcgagt gcaggaagtg ggaaaacctt tgctttgagt
      541 gtgcgttttg tggctcttat tttaaaagga gctaagatta atgaaatttt agctttaact
      601 tttactaaaa aagctgccaa tgaaatgcaa aaaaggattg ttgagacttt tttaaattta
      661 gaaaaagaaa ataaaacaag tgaatgtaat gaactttgta agcttttaga taaaagcaaa
      721 aaagagctta tttctttgcg agatactaaa aaggaagaat ttttaagaac cgagttaaaa
      781 attagtactt ttgatgcttt ttttggaaaa attttacgtg tttttgcttt aaatttaggt
      841 ttaagtagtg attttacaat gagtgaagaa aaacttgatg taagagagat ttttttaaaa
      901 cttcttaaaa aagatgaatt aaaagatttg gcttattata ttaatttagt tgatgagaaa
      961 gaaaattttt ttaatgaact tgaaaaattt tatgagaatg cttattttca gaattaccct
     1021 aaaattccaa acccatctaa agcttatatt aataaagctt atagtgagtt aagaacttat
     1081 tgtttaagtt tgactcatgt gaaaaattat aattatttgt gtaataattt taaaagcgaa
     1141 gttttagatt tagctgaatt tatgaaatca agttttatgg aaaaatttaa aagcacaaaa
     1201 tatctgcaag atctacaaaa catagatttg cattttagca caaaaagaat ggagcttata
     1261 aatgctttaa atgcttatgc tatagagctt gaaaattata aaatcgctaa tttaatgaat
     1321 cttttaaatc attataacga ggctaaaaac atacttcata aagataaaaa taccttaaat
     1381 ttccaagatg taagtaaaaa agtttatgag ttgattacaa gtgattttaa ggatatgatt
     1441 tattttcgtt tagatggttt tatttctcat ttgcttattg atgaatttca agatactagc
     1501 gtaatccaat accaaatttt acgtccttta attgctgaac ttgtttcagg agaaggggtt
     1561 aaaaaaaatc gtactttttt ttatgtggga gataaaaaac aaagtattta tcgttttcgt
     1621 aaaggaaaaa aagagttatt tgatttgtta aaacaagaat ttatacagat taaaagcgat
     1681 aatttaaata ccaattaccg ctctaaagaa cttttggttg attttgttaa tgaaactttt
     1741 aaagaaaaaa tcaaagatta taaagaacaa tttgccttag aaagtaaaaa aggtggtttt
     1801 gtgcgtattg tggagtctaa ggagcaaaag gttaaaaatc aagctcaaga aattaaagaa
     1861 aagactttaa aaactttgct tgggcaaatt aattttttaa gatctaaaaa tatttcttat
     1921 gatgatattt gtattttatg ttggaaaaat aatgatgcag atatggtatt ggatttttta
     1981 agagagcaaa aaattccagc atttactcaa agtaatgttt tgcttgaaaa taaagcaagt
     2041 gtgagacttg ttttagagta cgctaaatat tgtatttttg gtgatgcgtt ttatttggta
     2101 tttttaaaag aacttttggg ttttaaacca agaaaaatca ctcttgattt ttcaaaaaat
     2161 gctatggaaa atgtgctttt tttgataaaa gaattaaaac ttgatttaaa tgatatagct
     2221 ttaatacaat ttatcgaaca cgctaaaaca aaggaaaatt ttttaaaact tttgtttgag
     2281 ccttgtactt tgaaaatagt aagtgaacaa aatgtgggca ttagtattat gagcgtgcat
     2341 aaatctaaag gtttagagtt tgatcatgta atcttgttag acagtctttc taaaaacaat
     2401 ccaaataatg aaaatatcat gcttgaatac gatatcaatc aaggttggca gctgcatatc
     2461 aaagataaaa tccgagaagt caccaaagag cctatttaca ctctttttaa agaaaatatt
     2521 gcaagagcaa attacgaaga tgatatcaat aaactttatg tggcttttac aagagctaag
     2581 gaaagtttga ttgtcataaa aagaaatgaa gaatgtgtta atggacatta tccaagttat
     2641 tttaagggag agtttttaaa tatagcctcc caagaaagag gttttttaga aagtaaagag
     2701 caaatttcaa gtgtcaaaaa agaaagcctt caaaatttac aaaaatttga aaaaattgcc
     2761 ttgcaagaag ttcaaagcga agaaagactt ggtagtaaag aaatgtattt tggaaatgct
     2821 tttcactttt ttatgcaaaa tttaaaactt cctaagggtg aaaattttca aacactcatt
     2881 caacaatgca ggagtaattt taggcatttt ttagatgaga gtgattttga aaagcttttt
     2941 aaaaggattg aaattttact taaaaatact caatttcaag cattgattaa tgataaaaaa
     3001 cttttaaaag aacaaacttt aagttttaat ggggagatta aacaattaga tttacttgct
     3061 ttaaaagatg aagaagcttt cataattgat tataaaacag gtcttgctat gcaagataaa
     3121 cataaagatc aagtaagaac ttataagatt gctattagtg aaattttaaa aaaagataaa
     3181 gtgcgtgctt ttgtgattta ttgtttagag gataaaattt taatcgaaga acttatcgaa
     3241 gaatagggtg aaattcaaat ccttgtgatt tgtaatgctt tatcgatggc aaaaaaacaa
     3301 ttaaacataa caagctttaa tctcttcttt tgcaaaatac tcttgtatag acttgtccat
     3361 gctgcgtttt cctactagct ataaaatgcc caactttcat actccacata aaaatgtaac
     3421 attataatca aatcaaggag ttattataac aataaattgt tataataatt aaaatatttt
     3481 tatccaatta ttttgagata ggaaacactg ataaaatttt ttgatacctt atgatgatta
     3541 tgcaaaaaag catttttagt gtggagataa aagatgagca aaaaatataa tatatattgg
     3601 gatagtgatg agtgtgaaaa agatgaaaaa tatatggata aatattgtaa att
//
LOCUS       DAPWAA010000101         3555 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.102, whole genome shotgun sequence.
ACCESSION   DAPWAA010000101 DAPWAA010000000
VERSION     DAPWAA010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3555
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.102"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..1264
                     /locus_tag="RTF91_001661"
     CDS             <1..1264
                     /locus_tag="RTF91_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HDZ4944514.1"
                     /translation="NVIENFKQLCKIPHCSYETEKMKEFLSSYAKDKGFKVSIDKAGN
                     IHAIKGKPKICLQSHYDMVCMGDAPNLEVYEENGFLKAKNSSLGADNGIGIAIMMSAM
                     AEFENLECLFTNDEEVGLMGVNSLEHTLESKMLLNLDHEKDDEIMIGCAGGVDIEASL
                     PFNTLEKKGKIYELYAQNFKGGHSGINIVLNEKSSIKEMAKFIQENEGEIISFEGGER
                     INSIPKHAKALVHFKNEVKSNEWIKCEFKEESEFEICDQSKKLLSLINSFAHGVRAYD
                     ENLGIVQTSINLATLRMQDKQIKFALFARSNVLDGLKQVEFETLEFFKTFDFKARSFN
                     FYPPWEGKPNALSDMVFKVLKKVSPNAKVSAIHAGLECGIIEKKQELLCASIGPNIHN
                     PHSTDEHCEITSVEKISKVVFEVLKDNA"
     gene            complement(1247..2494)
                     /locus_tag="RTF91_001662"
     CDS             complement(1247..2494)
                     /locus_tag="RTF91_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ4944515.1"
                     /translation="MQKKYKNIIYASLGGILEFYDFVLFAFFLDIFAKVFFPQNDAFW
                     MQINTYIAFGAAYLARPFGSIVMAHFADRYGRKNIFYISMLLMVLPSFALAFLPGYES
                     IGIFATLILFVIRILQGLAVGTEVSGAWIYVSEFVKGRQIPLALGFISATLTVGLLLG
                     NLATLGIRSYFSPEDVQSYAWRIPFIIGGFFGILALFLRNKLSETPEFVKVQNEKKIL
                     NFPLFEALKTHKMSMLVCFLMTMVLTSGVATLMILPKYFESLLTMSKTSVLWVQNFAI
                     LAVIFGALFQGFLASKWGSYKICSIFSIVFVIFGMLFSFYDENFLFYFLLACFAQGII
                     TFAPVFMTQIFKSELKFSGLSFAYNISYAILGFLTPFIVNAFYKEYLGVYLAIVGSCS
                     LLCVFLLERVFARSKIKELSIVF"
     gene            complement(2534..3373)
                     /locus_tag="RTF91_001663"
     CDS             complement(2534..3373)
                     /locus_tag="RTF91_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDZ4944516.1"
                     /translation="MKKILLSVLTAFVAVVLAACEGNSDSKTLNSLDEIKQNGVVRIG
                     VFGDKPPFGYVDEKGNNQGYDVVLAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKV
                     DIILANFTQTPQRAEQVDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTAD
                     AYFTQNYPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWIKDHPDFKMGIKELG
                     NKDVIAPAVKKGDKELKEFIDNLIIKLGQEQFFHKAYNETLKDHFGDDVKADDVVIEG
                     GKI"
BASE COUNT         1388 a          604 c          489 g         1074 t
ORIGIN      
        1 aaatgttata gaaaatttta aacaattatg caaaattcct cattgcagtt atgaaacaga
       61 aaaaatgaaa gaatttttaa gctcttatgc taaagataaa ggctttaaag taagcataga
      121 taaagcagga aatatccatg ccataaaagg caaaccaaaa atttgcttac aaagccatta
      181 tgatatggtc tgcatgggtg atgcaccaaa cttagaagtg tatgaagaaa atggtttttt
      241 aaaagctaaa aattcaagcc ttggtgcaga taatggcata ggcatagcca ttatgatgag
      301 tgctatggct gaatttgaaa atttagaatg cctttttaca aacgatgaag aagtaggact
      361 aatgggagta aattcactcg aacacacttt agaatctaaa atgcttttaa atttagatca
      421 cgaaaaagat gatgagatca tgataggctg cgcaggtgga gtggatatag aagctagttt
      481 accttttaac actcttgaaa aaaagggtaa aatttacgag ctttatgcac aaaattttaa
      541 agggggacac tcaggtataa atatcgtact caacgaaaaa agttctatta aagaaatggc
      601 taaatttata caagaaaatg aaggtgaaat catttctttt gaaggtgggg aaagaataaa
      661 ttctatacct aagcacgcta aagctttagt gcattttaaa aatgaagtaa agagtaatga
      721 atggataaaa tgtgaattta aagaagaaag tgaatttgaa atttgcgatc aaagcaaaaa
      781 acttttaagt ctgataaatt cttttgctca tggagttaga gcttatgatg aaaacctggg
      841 catagttcaa acaagcatta atctagccac tttaagaatg caagataaac aaatcaaatt
      901 cgcacttttt gcaagatcta atgtacttga tggactcaag caagtagaat ttgaaacttt
      961 ggaatttttt aaaacttttg attttaaagc aagaagtttt aatttttatc caccttggga
     1021 aggcaaacca aacgcactta gcgacatggt ttttaaggtg cttaaaaaag tatcacctaa
     1081 tgctaaagtt tcagctatcc atgcagggct tgaatgtggc attatagaaa aaaaacaaga
     1141 acttttgtgt gcttctatag gaccaaacat ccataatcct cattcaaccg atgaacattg
     1201 tgaaatcact tcagttgaaa aaatatctaa ggttgttttt gaagttttaa aagacaatgc
     1261 ttaattcttt aatcttactt cttgcaaaaa cgcgttcaag caaaaacacg caaagcaagg
     1321 agcaagatcc cactatcgca agataaacac ctaaatactc tttataaaaa gcgttaacta
     1381 taaaaggggt taaaaaacct aaaattgcat aagaaatatt ataagcaaaa ctaagtccgc
     1441 taaatttaag ttcactttta aaaatttgtg tcataaaaac aggtgcaaaa gtgataatac
     1501 cttgcgcaaa acaagccagc aaaaaataaa ataaaaaatt ctcatcataa aaactaaaaa
     1561 gcataccaaa aatcacaaaa actatactaa aaatagaaca aattttataa cttccccatt
     1621 tacttgccaa aaaaccctga aataaagctc caaaaatcac cgctaaaata gcaaaatttt
     1681 gcacccataa aacagaagtt ttactcatag ttaaaaggct ttcaaaatac tttggtaaaa
     1741 tcatcaaagt agccacacca cttgttaaaa ccatagtcat taaaaagcaa acaagcatac
     1801 tcattttatg cgtttttaaa gcttcaaata atggaaaatt taaaattttc ttttcatttt
     1861 gcacttttac aaattctgga gtttcactaa gtttatttct taaaaacaga gccaaaattc
     1921 caaaaaatcc tcctatgata aagggaatcc tccaagcata actttgaacg tcttctggag
     1981 aaaaataaga tcttatacct aaagtagcaa gatttcctaa taataaacct acagttaaag
     2041 tcgccgaaat aaaaccaagg gctaaaggaa tttgacgccc tttgacaaat tcactcacat
     2101 aaatccaagc tccactcacc tcagttccaa cagctaaacc ttgtaaaata cgaataacaa
     2161 ataaaatcaa agtagcaaat atacctatac tttcataacc tggtaaaaaa gctaaagcaa
     2221 aactaggcaa aaccatcaag agcatagaaa tataaaaaat attttttctt ccgtatctat
     2281 cagcaaaatg tgccatcaca atagaaccaa aagggcgcgc caaataagca gcaccaaatg
     2341 ctatataagt atttatctgc atccaaaaag cgtcattttg cgggaagaat accttggcaa
     2401 aaatatccaa aaaaaaagca aaaagtacaa aatcataaaa ttctaaaatt ccacctaagg
     2461 aagcataaat aatatttttg tatttttttt gcatatttta tcctaaatca attaaagggc
     2521 aaaaagccct ttattaaatt tttccacctt caatcactac atcatcagct ttgacatcat
     2581 ctccaaaatg atcttttaaa gtttcattat aagccttgtg aaaaaactgt tcttgaccta
     2641 gcttaatgat caaattatca ataaattcct taagctcttt atcacctttt ttaactgctg
     2701 gtgcgataac atctttattg cctagctctt taatacccat tttaaaatca gggtgatctt
     2761 ttatccaagc aaaaagcaag gtattatcat gacttaaagc atcgcctctt ttatccatca
     2821 aagcagcaaa agtttcagta ttttgatcgt attttaaagt ttttatatta ggataatttt
     2881 gcgtaaaata tgcatccgcc gttgtacctt tgtttaaaag taaagttttg tcttttaaat
     2941 cctctacact agtaatatta ctatccttcg gtacagcaac acctaaagcc actttcatat
     3001 aaggtaagca aaaatcaacc tgttctgctc tttgcggagt ttgagtaaaa ttagctaaaa
     3061 taatatctac tttatttgat tttaaaaact caaccctatt tgccgcctca acaagaacaa
     3121 attgcacctt gttttcatct ccaaaaagtt cttttgctat acgtttagct aaaactacat
     3181 catagccttg attatttcct ttttcatcta cataaccaaa gggtggttta tcaccaaata
     3241 ctccaatcct aacaactcca ttttgcttaa tttcatcaag agaatttaaa gttttagagt
     3301 cagaatttcc ctcacaagca gccaacacta ctgcaacaaa ggccgttaaa acacttagaa
     3361 gtattttttt catgtatttc ctttctttaa aaaataagcc ttaaggcatt acaaaaatat
     3421 ataaacaatt gccaaattaa ttatacttat aaattataaa taatgtattt aaattaaact
     3481 aaaaagattt ttcatgtgta aaaatgtaat taatctcata ctttcttttg gcattgttta
     3541 atttttaagt aaaaa
//
LOCUS       DAPWAA010000102         3552 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.103, whole genome shotgun sequence.
ACCESSION   DAPWAA010000102 DAPWAA010000000
VERSION     DAPWAA010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3552
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.103"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..192
                     /locus_tag="RTF91_001664"
     CDS             <1..192
                     /locus_tag="RTF91_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HDZ4944517.1"
                     /translation="NDDLFCKKIKKEPFEDYIFLVSENKKYEDKKVDNSEFEQCEILG
                     AVVSKMAIETFKNFIEVVG"
     gene            201..1109
                     /locus_tag="RTF91_001665"
     CDS             201..1109
                     /locus_tag="RTF91_001665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944518.1"
                     /translation="MKKEEKIKRKEYNVFFYKLSVKPNLFNQENEIYNSMLKFLKINL
                     RDRQLCDINGCKAYVNFIKEKNGIYLFYFEKYRQEELPQIENIINGNIRNIYLEENEA
                     ITEKTCFALCFNETKGAFYIAYVKLQHSYEPSSLLKYISQTIGIKEDDLNLSIILHKD
                     TLEKLYKYEKIKGYSYTIATPNETLLKEFGLSKESRFILAKEQVSKIKFEISLEETQK
                     FTKSKKEKINKLISNNTDCIKKLIMEVCSKNEKPEKIDLFKDIFKDKIKVNINKNNAI
                     NLESIGEKLIETLQKNKNNLDNILKK"
     gene            1117..1467
                     /locus_tag="RTF91_001666"
     CDS             1117..1467
                     /locus_tag="RTF91_001666"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944519.1"
                     /translation="MIHLIKEILKALVDKIDVILGASLTLAGFLITALTIIITIMPNY
                     AENSLKQEFFNDFKIAIRFSIICALFAFLCLVLKRQESVSYILAFIDGVLFLITLWTT
                     YKSVKSLFFIAENK"
     gene            1464..2126
                     /locus_tag="RTF91_001667"
     CDS             1464..2126
                     /locus_tag="RTF91_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HDZ4944520.1"
                     /translation="MKKLILLPLLATLVLADYSQYKPSEDFAKYFTKQSCSQILDKFY
                     YINCYDYNLKGTKAVAYRLEAENLKGEQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYD
                     RGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
                     NLVNYDSNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHEVDNENIKSYKINCDILT
                     GS"
     gene            2191..2694
                     /locus_tag="RTF91_001668"
     CDS             2191..2694
                     /locus_tag="RTF91_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002923453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SocA family protein"
                     /protein_id="HDZ4944521.1"
                     /translation="MKKIENIIIYIINYFQTNYAPADLGKVKLNKILWFADRAFMYKN
                     YASLTQTSYIKNPQGPVVKKLENILTSLEKNEFIKSIKVNKGEYQQQSFLCLKEPNLD
                     DFTAKEISILDETINKFALKTAKELSEMSHDKCWEKTKNGDTMPIESVFLQDIIPATK
                     EDVNGLH"
     gene            2681..2956
                     /locus_tag="RTF91_001669"
     CDS             2681..2956
                     /locus_tag="RTF91_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944522.1"
                     /translation="MACIENADDLCKHFNISEDCKIKIHNLFNTHKDNFLKPCIGIFH
                     GIKKQNTIILEHENEYPPGIFCVKTNYLKIVYKKEKFEITNIDWINS"
     gene            complement(3001..3408)
                     /locus_tag="RTF91_001670"
     CDS             complement(3001..3408)
                     /locus_tag="RTF91_001670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944523.1"
                     /translation="MIKLKLFFEACFATFIYLIALTVLQFILIKTTNPFHLIFEFKKM
                     FIVSILVYSILIGYGLVTYVNAEYVTLKPISDNLELGYVPSNFIEVSDLEIFIKYVLF
                     FSPFVLSLFFSIWLYKYKKPKKSLKTFLENWKD"
     gene            complement(3383..>3552)
                     /locus_tag="RTF91_001671"
     CDS             complement(3383..>3552)
                     /locus_tag="RTF91_001671"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944524.1"
                     /translation="PQIIGDLIEGETKHLLLAGNNIVELKSKNDYIENFERTWDRLNL
                     WWRYDKVEAFF"
BASE COUNT         1514 a          414 c          464 g         1160 t
ORIGIN      
        1 aatgatgatt tattttgtaa aaaaattaaa aaagaacctt ttgaagatta tattttttta
       61 gtttctgaaa ataaaaaata tgaagataaa aaagtagata atagcgaatt tgaacaatgc
      121 gagatcttag gtgctgtagt atcaaaaatg gcgattgaaa cctttaaaaa ttttatagaa
      181 gtggtgggat gagagtaaat atgaaaaaag aagaaaaaat aaaacgaaaa gaatataatg
      241 tattttttta taagctaagc gtaaaaccca atttatttaa tcaagaaaat gaaatttata
      301 atagtatgtt aaagttttta aaaataaatt taagagatag acaactttgc gatattaatg
      361 gatgcaaggc atatgtaaat tttataaaag aaaaaaatgg aatatattta ttttatttcg
      421 aaaaatatag acaagaagaa ttaccgcaaa ttgaaaatat aattaatgga aatattagaa
      481 atatatatct agaagaaaat gaagctatta cagaaaaaac ttgctttgct ttatgtttta
      541 atgaaacaaa aggtgctttt tatatagctt atgtaaaatt acaacattct tatgaaccat
      601 cgtctttact taaatatatt tctcaaacta taggaattaa agaagatgat ttaaatttat
      661 caattatctt acataaagac actttagaaa aattatataa atatgaaaaa atcaaaggat
      721 attcttatac tattgctaca ccaaatgaaa cactattaaa agagttcgga ctttcaaaag
      781 aaagtcgttt tattttggca aaagaacaag tttctaaaat taaatttgaa atttcactag
      841 aagaaacaca aaaatttaca aaatcaaaaa aggagaaaat aaataaactt atttcaaaca
      901 acacagattg tattaaaaaa cttattatgg aagtttgttc aaaaaatgaa aaacctgaaa
      961 aaatagattt atttaaagac atttttaaag ataaaattaa agtaaatatt aataaaaata
     1021 atgctataaa tttagaaagt attggagaaa aacttataga aacgttacaa aaaaataaaa
     1081 ataatttaga taatatttta aagaaatgat tggaatatga tacacttaat taaagagatt
     1141 ttaaaagctt tagttgataa aatcgatgtt atcttaggag cttccttaac attagccgga
     1201 tttttaatta ccgcactaac tattattata actataatgc caaattatgc tgaaaattct
     1261 ttaaaacaag aattctttaa tgattttaaa atagcaataa gattttctat aatatgtgct
     1321 ttatttgctt ttttgtgttt agttttaaaa agacaagaaa gtgtttctta tattttagct
     1381 tttatagatg gggttttatt tttaattaca ctttggacta cttataaatc agttaagagt
     1441 ttatttttta tagctgaaaa caaatgaaaa aactcatact tttaccgttg ctagcaactc
     1501 tagtcttagc tgattatagc caatacaaac caagtgaaga ttttgctaag tattttacta
     1561 agcaaagttg ttcacaaatt ttagataagt tttattatat aaactgctat gactataatt
     1621 taaaaggcac aaaagctgta gcttatagat tagaagctga aaatttaaaa ggcgaacaaa
     1681 tcaaaaaacg cccacgcttt gaagatgata caaatatacc taaaaaatac cgcactacat
     1741 ggagtgatta taaaaacagc ggttatgata gaggacacac tctttctaat gcttcaatga
     1801 gaaaaacaac tcaagctcaa agaagtactt ttttaatgag taatattact ccacaaaatc
     1861 cacaaatcaa tcaaagggtt tggaacaaga ttgaaaaaag agaaagacaa gtagctttaa
     1921 agcttgggag tttagaagtt ttaaatttag ttaattatga tagtaatcca caaagaataa
     1981 gaaatcaaat tgctattcca agctcttaca ctaagatttt aaaaggcgag aattttaaag
     2041 aatgctatca agtgccaaat catgaagtcg ataatgagaa tataaaaagt tataagatta
     2101 attgtgatat tttaaccggc agttgacaat cttaaacgat tttttagttt aagtatatta
     2161 tgcttttata aatttagaaa ggagtataag atgaaaaaaa tagaaaatat aattatttat
     2221 atcataaatt actttcaaac gaactatgct ccagctgatc ttggaaaagt aaaattaaat
     2281 aaaattttat ggtttgcaga cagagccttt atgtataaaa attacgcatc tctaactcaa
     2341 acatcttata taaaaaatcc acaaggaccg gtagttaaaa aattagaaaa cattttaact
     2401 agtttagaaa aaaatgagtt tatcaaaagc ataaaagtaa ataaaggcga atatcaacaa
     2461 caatctttct tgtgtttaaa agagcctaat ttagatgatt ttactgcaaa agaaataagt
     2521 attttagacg aaactatcaa taaattcgcc ttaaaaacag caaaagagct ttcagaaatg
     2581 tctcatgata aatgctggga aaaaacaaaa aacggtgata ctatgcctat tgaaagcgta
     2641 tttttacaag atattatacc agctacgaaa gaagatgtaa atggcttgca ttgaaaatgc
     2701 tgatgattta tgtaagcatt ttaatataag tgaagattgt aaaataaaaa ttcacaatct
     2761 ttttaatact cataaggata attttttaaa accctgtatt ggtatttttc atgggataaa
     2821 aaaacaaaat acaataatat tagaacatga aaacgaatat cctccaggga ttttttgtgt
     2881 aaagacgaat tatttgaaaa ttgtttataa aaaagaaaaa tttgaaataa ctaacataga
     2941 ctggataaat tcataaatct taacctctca ataccccatc aaccttttat atccatcgca
     3001 ttaatccttc caattttcta aaaatgtttt taaggatttt tttggttttt tatacttata
     3061 tagccaaatg ctaaaaaata agcttaaaac aaatggtgaa aagaataata catatttaat
     3121 aaaaatctct aaatcactta cttctataaa attactaggc acataaccta attctaaatt
     3181 atcgctaatg ggtttaagtg ttacatattc tgcatttaca taagttacta atccatagcc
     3241 aattaatata gagtaaacta aaattgatac aataaacatt tttttaaatt caaaaattaa
     3301 atggaatgga tttgtggttt taattaaaat aaattgcaaa acagtcaaag caatcaaata
     3361 aataaatgtt gcaaaacatg cttcaaaaaa aagcttcaac tttatcatat ctccaccaaa
     3421 gattaagtct atcccatgtt ctctcaaaat tctctatgta gtcatttttt gactttaatt
     3481 caacaatatt attaccagct aaaagaagat gtttggtttc accttctatt aaatctccta
     3541 taatctgtgg ta
//
LOCUS       DAPWAA010000103         3530 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.104, whole genome shotgun sequence.
ACCESSION   DAPWAA010000103 DAPWAA010000000
VERSION     DAPWAA010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3530
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.104"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            41..745
                     /gene="trmD"
                     /locus_tag="RTF91_001672"
     CDS             41..745
                     /gene="trmD"
                     /locus_tag="RTF91_001672"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDZ4944525.1"
                     /translation="MKFSFVSLFPNLIEFYFQDSILARAREKKLFKLNFYNPRDFSKN
                     SYHKVDNYKIGGGVGLLIQIESMYEVLRSIQEKEENPHFIFLNPSGKTFNQKDAKRLS
                     KKEHIVFVCGRYEGIDERVLEIFANEVFSIGDFILTGGELPALAMCDAILRNVNGVLG
                     NIESLEEESFENSLLEAPSFSKPFIFEKKNKRFYTPSEFLKGNHARITSLKTTLASCK
                     TKFFRPDLFLEHERKK"
     gene            756..1112
                     /gene="rplS"
                     /locus_tag="RTF91_001673"
     CDS             756..1112
                     /gene="rplS"
                     /locus_tag="RTF91_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDZ4944526.1"
                     /translation="MKNKYIEQFEAKQIEGKNVPDFRAGDTLKLAIRIKEGDKTRIQN
                     FEGICIARRGNGVSETFIVRKMGANNVGVERIFPIYSESLESITVLRRGRVRRARLFY
                     LRDRRGKAARIKELKK"
     gene            1196..1609
                     /gene="uraH"
                     /locus_tag="RTF91_001674"
     CDS             1196..1609
                     /gene="uraH"
                     /locus_tag="RTF91_001674"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HDZ4944527.1"
                     /translation="MLSIKKFLLMLASVPMFLSATEYQLSTHVLDITSGQPAPKVKVE
                     LYKLEANQQWKKVSEEFTKENGRIGDLLPYEKAENRAFGIYKLKFFTKDYYILHKINT
                     FYPFVEVSFELSKDQKHYHVPITLSPFGYSTYRGS"
     gene            1632..2972
                     /locus_tag="RTF91_001675"
     CDS             1632..2972
                     /locus_tag="RTF91_001675"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HDZ4944528.1"
                     /translation="MWTKNSWKNYPIKQQPIYPNQEEMNRVLAKLEKLPPLVFAGEVR
                     NLQKSLARVCRKEAFLLQGGDCAESFENFGAVNIRDMFKILLQMAIVLTFAGGCPVVK
                     IGRIAGQFAKPRSSDFEELNGVSLPSYRGDIINGFEFNKQARIPDPNRMLEAYYQSAT
                     TLNLLRGFAKGGLADLHEVHRWNLGFLKKSELHKQYTDISEKISQALAFMEACGININ
                     NTPSLREVSIYTSHEALLLPYEEALTRVDSLSGEIYDCSAHMLWIGERTRALDEAHVH
                     FLSGVKNPLGVKIGPNARAGDIIALANVLNPNNEEGRLNIIIRMGADKIISNLPKIFS
                     KLKSEGLNLVYSIDPMHGNTVKAGNFKTREFDKIIQEVRSFFEIAMSEGVYAGGVHLE
                     MTGQDVTECTGGASNVTAQSLEDRYETQCDPRLNADQALELAFLIADLVKKARR"
     gene            2969..3298
                     /locus_tag="RTF91_001676"
     CDS             2969..3298
                     /locus_tag="RTF91_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family transcriptional regulator"
                     /protein_id="HDZ4944529.1"
                     /translation="MKLYGIKNCNSVKKAMDALMQKGIVFDFIDIKKINQDILYIWLK
                     QKSFEELINTAGLTSKKLGLNKEKIKNLNEKELEKIVLENPSCIKRPIIEYEQIIYIG
                     KEYEKIL"
     gene            complement(3310..3516)
                     /locus_tag="RTF91_001677"
                     /pseudo
     CDS             complement(3310..3516)
                     /locus_tag="RTF91_001677"
                     /inference="COORDINATES: protein motif:HMM:NF021758.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1264 a          432 c          654 g         1180 t
ORIGIN      
        1 ttttttgcac ccaagatgca tttttaattt tagaaaattc atgaaattta gtttcgtttc
       61 tttattccct aatcttatag aattttattt ccaagattct atacttgcaa gagcaagaga
      121 aaaaaaactt tttaaactta atttttataa tccaagagat ttttctaaaa attcctatca
      181 taaagtcgat aattataaaa taggtggtgg agtagggctt ttaatacaaa ttgaatctat
      241 gtatgaagta ttaagaagta ttcaagaaaa agaagaaaat cctcatttta tttttttaaa
      301 tccaagcggt aaaactttta accaaaaaga tgccaagcgt ttgagtaaaa aagaacatat
      361 agtttttgta tgcggacgct atgagggcat agatgaaaga gtgcttgaaa tttttgcaaa
      421 tgaggttttt agcataggag attttatttt aacaggagga gaattgcctg cgcttgcaat
      481 gtgtgatgca attttaagaa atgttaatgg agttttggga aatatagaaa gcttggaaga
      541 agaaagtttt gaaaatagtt tacttgaagc accatctttt tcgaaacctt ttatttttga
      601 gaaaaaaaat aaaaggtttt atactccttc agagttttta aagggtaatc acgctagaat
      661 tacaagttta aaaactactt tggcgtcttg caaaacgaaa ttttttcgtc cagatttatt
      721 tttagagcat gaacgcaaaa aataagggat tttttatgaa aaataaatac atagaacaat
      781 ttgaagcaaa acaaattgaa ggtaaaaatg ttccagattt tcgtgctggt gatactttaa
      841 agcttgcaat tcgcatcaaa gaaggggata aaacaagaat tcaaaatttt gaaggtattt
      901 gcattgctag aagaggtaat ggtgtaagtg aaactttcat cgtgcgtaaa atgggtgcta
      961 ataatgttgg agttgaaaga attttcccta tttatagtga aagtttagaa agtattaccg
     1021 ttttacgccg tggtcgcgta cgtcgtgcaa gattattcta cttaagagat agacgtggta
     1081 aagcagcacg tattaaagag cttaaaaaat aatttataat ttttattatt tgattataat
     1141 tattagtaat attcttgtat aatatttttt tgtaaatatt atacaaggag agaaaatgct
     1201 ttctattaaa aaatttttat taatgctagc aagtgtgcca atgtttttga gtgctactga
     1261 atatcaatta agcactcatg ttttggatat tacttctggg caacctgctc ctaaagtaaa
     1321 agttgagctt tataagttgg aagcaaatca acagtggaaa aaagtgagtg aagaatttac
     1381 caaagaaaat ggtagaatag gagatttact accatacgaa aaagctgaaa atagagcttt
     1441 tggaatttat aagcttaaat tttttacaaa agattattat atattgcata aaataaatac
     1501 tttttatcct tttgtagagg tgagttttga gctttctaaa gatcaaaaac attatcatgt
     1561 tccaataact ctttcgcctt ttggttattc aacttataga ggaagctgat aaataaaatg
     1621 aaagaaaaat catgtggact aaaaattctt ggaaaaacta tcctataaaa cagcaaccta
     1681 tttatccaaa tcaagaggag atgaatagag ttttagcaaa acttgagaaa cttcctcctt
     1741 tggtttttgc tggtgaagta agaaatcttc aaaaatcttt agcaagagtt tgtagaaaag
     1801 aagctttttt acttcaaggt ggagattgtg ctgaaagctt tgaaaatttt ggtgctgtaa
     1861 atatccgtga tatgtttaaa attttgcttc aaatggctat agtacttaca tttgctggcg
     1921 gatgtcctgt tgtaaaaatt ggtcgcattg caggacaatt tgctaagcca agaagcagtg
     1981 attttgaaga gttaaacggt gttagccttc ctagttatcg aggtgatatt attaatggtt
     2041 ttgaatttaa taagcaagcg cgtattcctg atccaaatag aatgcttgaa gcttattatc
     2101 aaagtgcgac aacacttaat ttattgcgtg gatttgctaa gggtggttta gcagatttgc
     2161 atgaggtaca tcgttggaat ttaggttttt taaaaaagag tgaacttcat aaacaataca
     2221 ctgatattag tgaaaaaatt tcacaagctc tggctttcat ggaagcttgc gggattaata
     2281 taaataatac tccaagtcta agagaagtaa gtatttatac ttcacatgaa gctttgcttt
     2341 taccttatga agaggcttta actagagtgg atagtttaag tggggaaatt tatgattgtt
     2401 cagctcatat gctttggata ggtgagagaa caagagcgct tgatgaagct catgtgcatt
     2461 ttttaagtgg ggtaaaaaat cccttaggag ttaaaatagg acccaatgca agagctggtg
     2521 atattatagc tctagcaaat gtattaaatc caaataacga agaaggaaga ttaaatatta
     2581 ttatccgtat gggtgctgat aaaattatca gcaatttgcc aaaaattttt tctaaactca
     2641 aaagcgaagg tttaaatttg gtatatagca tagatcctat gcatggaaat acagtaaagg
     2701 cgggtaattt taaaacacgt gagtttgata aaatcataca agaagtgaga tctttttttg
     2761 aaatcgcaat gagcgaagga gtttatgcag gcggagtgca tcttgaaatg acaggccaag
     2821 atgtaacaga atgtacaggc ggtgcaagta atgttactgc tcaaagtcta gaagatcgtt
     2881 atgagacgca atgtgatcca aggcttaatg cagatcaagc tttagaactt gcctttttga
     2941 ttgcagattt agtaaagaag gctagaagat gaaactttac ggtattaaaa attgtaattc
     3001 tgtaaaaaag gctatggatg ctttaatgca aaaaggtatt gtatttgatt ttatagatat
     3061 taaaaagatt aatcaagata ttttatatat atggttaaag caaaaatctt ttgaagaact
     3121 tatcaatact gcgggtttaa cttctaaaaa acttggttta aataaagaaa aaattaaaaa
     3181 tttaaatgaa aaagaacttg aaaaaattgt attagaaaat ccaagttgta tcaagcgtcc
     3241 tattattgag tatgaacaaa ttatatatat tggcaaggaa tatgagaaaa ttttataata
     3301 gagtgtttat tacactctat tttttatcaa ttgattaatt tcattttgat agggaaatct
     3361 ttcactttca caattaataa gttgtgtttt agaaaagata acttttctat ctacttcaac
     3421 gataaaatca cctttgccac caatttcaaa ttccacttca atatctttga aatcgctttg
     3481 tagttcttct gcaacccttg cagcttgtgg gcgataattt caaagattgc
//
LOCUS       DAPWAA010000104         3383 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.105, whole genome shotgun sequence.
ACCESSION   DAPWAA010000104 DAPWAA010000000
VERSION     DAPWAA010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.105"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            10..1602
                     /gene="yidC"
                     /locus_tag="RTF91_001678"
     CDS             10..1602
                     /gene="yidC"
                     /locus_tag="RTF91_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDZ4944530.1"
                     /translation="MNNSNNIFQQKRILLAVVISFLFFVVYDYFFIPKHPLKIEQNIT
                     QQNQQNTSINNTPNIQNTTTNTPNAALVSQDSVISKVQSKHFEAQIDSFGRISAFYLK
                     DKKYQNDKGEFINLINKENSPYPLEMRFSDPSVNSEAFKTPYVANINNLFVDENGSQV
                     LKLTQNLSGLKIEKNITFYAKGSYEIEVKLSKNANYFISPGYRPNIAVDSYTVHGALV
                     MDSKETIETYEDGDVEKDESVNNVVMTSAFDRYYATFFYNFDKPLNVVISKDSNKNPI
                     VFAYSDNEFKAGGYIGSKEHVILRSIDPRLEAVVEYGWFTFIAKPMFEFLDFLHQYIG
                     NWGWAIVVMTLIVRIVLFPLTYKSMISMNKLKDLAPKMKDIRERYKGDPQKMNMHMME
                     LYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWVHDLSVMDPYFILP
                     ILMGATMFLQQLITPMAIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFINNLCSLV
                     QQWVINKIFAKEHHKKQVEYEK"
     gene            1599..2417
                     /locus_tag="RTF91_001679"
     CDS             1599..2417
                     /locus_tag="RTF91_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Jag N-terminal domain-containing protein"
                     /protein_id="HDZ4944531.1"
                     /translation="MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRK
                     KAIIKAKAKKRILKKNPKKEFTSSKNYKMELQELKQESKIEIKNEKNRNQKEKYIIKS
                     DEIFDSFHRESKGVCNTQDILDEIRIQLVKLLESSQFKIELSELRMYDEDCVLIRLDG
                     EDAALMIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQSVIEK
                     IKIHGRGQTKPLDGVLIKIALEQLRAEFPNKYVGIKQNNDQRFVVINDFFKKDE"
     gene            2410..>3383
                     /gene="mnmE"
                     /locus_tag="RTF91_001680"
     CDS             2410..>3383
                     /gene="mnmE"
                     /locus_tag="RTF91_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDZ4944532.1"
                     /translation="MSDTIVAISTAHGVGSISIVRLSGERALEFALKLSRKTKLTPRY
                     ATFTKLFNQNNEIIDEAIMIYFKSPFSFTGEDIVEFQTHGGFSVSEILLEELVSLGAR
                     LALAGEFSKRACLNGKMTPLKALNIQDLILSKSVLAAKIIARNMQGNLGELLEKIRID
                     LVKTLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIA
                     IIGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESK
                     DTIEQIGVALSKKSLEDADIILAVFDASRKEDEEDKKIFKLLENIDKK"
BASE COUNT         1229 a          432 c          600 g         1122 t
ORIGIN      
        1 gacaaatcag tgaataattc aaataatatt tttcagcaaa agcgtatact tttagctgtt
       61 gtgatttctt ttttattttt tgttgtatat gattattttt tcattccaaa acacccttta
      121 aaaatagaac aaaatattac acaacaaaac cagcaaaaca caagtataaa taacacccct
      181 aatatacaaa atactaccac aaacactcca aatgcggctt tagtttcaca agatagcgtg
      241 atatctaaag ttcaaagcaa acattttgaa gcgcaaattg actcttttgg tagaatttct
      301 gctttttatt tgaaagataa aaaataccaa aatgataaag gagaatttat aaatctcatt
      361 aacaaggaaa acagtcctta tcctttggaa atgcgtttta gtgatccaag tgttaattca
      421 gaggctttta aaactcctta tgttgctaat attaacaatc tttttgttga tgaaaatgga
      481 agtcaagttt taaaacttac tcaaaatctt tccgggttaa aaattgaaaa aaacattact
      541 ttttatgcaa aaggaagtta tgaaatagaa gttaagctta gcaagaatgc aaattatttt
      601 attagtccag gatatcgtcc aaatattgct gtagatagtt acacggttca tggtgctttg
      661 gtgatggata gtaaagaaac tatcgaaact tatgaagatg gagatgtaga aaaggatgaa
      721 agtgttaata atgttgtaat gacttcagct tttgataggt attatgcaac tttcttttat
      781 aattttgaca aacctttaaa tgtggtaatc agtaaagatt ccaataaaaa ccctatagtt
      841 tttgcttata gtgataatga atttaaagca gggggttata taggttctaa agaacatgtg
      901 attttaagaa gtatagatcc acgtcttgaa gcggttgtgg agtatggttg gtttactttt
      961 atcgctaagc ctatgtttga gtttttggat tttttacatc agtatatagg aaattggggc
     1021 tgggctatcg ttgtgatgac tttaattgtg cgtattgttt tatttccact aacttataag
     1081 tctatgattt ctatgaataa acttaaagat cttgctccta aaatgaagga tattagagaa
     1141 cgctataaag gtgatccaca aaaaatgaat atgcatatga tggagcttta taaaaaacat
     1201 ggtgcaaatc ctatgagtgg ttgtttgcct atacttttgc aaattcctat tttctttgct
     1261 atttaccgtg ttttgcttaa tgctattgag ttaaaagcag ctccttgggc attttgggtg
     1321 catgatttat ctgtaatgga tccttatttt attttgccta ttttaatggg tgcaacaatg
     1381 tttttacaac aacttattac acctatggct atacaagatc ctatgcaagc taagattatg
     1441 aaatttttac cggtgatttt tacctttttc tttatcactt tcccagcagg tcttacgctt
     1501 tattggttta taaacaacct ttgttctttg gtgcaacaat gggtgattaa taaaatattt
     1561 gccaaagaac atcataaaaa acaagtggag tatgaaaaat gaaaatcgaa gccattgatc
     1621 ttcaaagtgc tttaacagaa gcttcaagaa gtttagaatg ctctgtgatg gatttagagt
     1681 atgagattat tcagcaccca agaaaaggtt tttttggatt tggaagaaaa aaggcgatta
     1741 taaaagctaa agcaaaaaaa agaattttga aaaaaaatcc taaaaaagaa tttacaagtt
     1801 caaaaaatta caagatggaa ctacaggagt taaaacaaga aagcaaaatt gaaataaaaa
     1861 atgagaaaaa tagaaatcaa aaagaaaaat atataataaa aagtgatgaa atttttgaca
     1921 gctttcatcg agagagtaaa ggagtttgca atactcagga tattttagat gaaattcgca
     1981 ttcaacttgt aaaactttta gaaagctctc agtttaaaat agagcttagt gagcttagaa
     2041 tgtatgatga agattgtgtt ttgattcgct tagatggaga agatgctgct ttgatgatag
     2101 gcaaagaagc acatcgttat aaagccattt cttatctttt gcacaattgg attaatttaa
     2161 aatataatct cttggtgcgt cttgaaattg ctcaattttt agaaaatcaa attcaaggta
     2221 tgcagcttta tttgcaaagt gtgattgaaa aaattaaaat tcatggacgc ggacaaacta
     2281 aacctttaga tggagttttg attaaaatcg ctttagaaca attaagagct gaatttccta
     2341 ataagtatgt aggaatcaaa caaaataacg atcaaagatt tgttgtgata aacgattttt
     2401 ttaaaaaaga tgagtgatac tatagtagct atttccacag ctcatggtgt gggttcgatt
     2461 tctattgtaa gattaagcgg cgaaagagct ttggaatttg ctttaaaact tagccgaaaa
     2521 accaagctca ctccacgtta cgctactttt acaaaacttt ttaatcaaaa taatgaaatc
     2581 atagatgaag ctataatgat atattttaaa tctcctttta gttttacagg tgaagatata
     2641 gtggagtttc aaactcatgg aggttttagc gtgagtgaaa ttttacttga agagcttgtg
     2701 agtttaggcg caagacttgc tctagcaggc gaatttagca aaagagcgtg cttaaatggc
     2761 aaaatgactc ctttaaaagc tttaaatata caagatctta tactttcaaa atccgtgctt
     2821 gcagctaaaa tcatagcacg caatatgcaa ggaaatttag gagaactttt agaaaaaatt
     2881 cgtatagatt tagttaaaac tttagctttt gtagaaacaa gtattgatta tgcagatgat
     2941 gatttacctt ctgatttatt agagcaaatt tctactatgt gtgaagaaaa ttctaaaatt
     3001 ttaaaagaaa tttatactct ttctcagagt aaaaaaggac ttatagaagg ttttaaaatt
     3061 gctattatag gtaagccaaa tgtaggtaaa tcctcacttt taaatgcttt gctttcttat
     3121 gaaagggcta ttgtttcaga tatagcagga acaacgcgtg atactataga ggaaagcttt
     3181 aaactaggga cgcatttatt acgtattata gatacggcag gtattagaga aagtaaagat
     3241 actatagaac aaattggcgt ggcattaagt aaaaaaagct tagaagatgc agatattatt
     3301 ttagcagttt ttgatgcttc aagaaaagaa gatgaggaag ataagaaaat ttttaagtta
     3361 ttggaaaata ttgataaaaa aat
//
LOCUS       DAPWAA010000105         3382 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.106, whole genome shotgun sequence.
ACCESSION   DAPWAA010000105 DAPWAA010000000
VERSION     DAPWAA010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3382
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.106"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            45..278
                     /locus_tag="RTF91_001681"
     CDS             45..278
                     /locus_tag="RTF91_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4492 domain-containing protein"
                     /protein_id="HDZ4944533.1"
                     /translation="MHLKRLYFSISQIFNFYKEGFKNLTLGKTLWKIIFIKLFVMFVI
                     LKLFVFDVNFNSIFKSDKEKSTFVLKNLTLEGK"
     gene            279..1841
                     /locus_tag="RTF91_001682"
     CDS             279..1841
                     /locus_tag="RTF91_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDZ4944534.1"
                     /translation="MNELSSVDWSRAQFALTALYHFLFVPLTLGLSFMIAIMETIYVK
                     TKNERWKKITKFWLSLFAINFAIGVATGIIMEFEFGTNWANYSWFVGDIFGAPLAVEG
                     IMAFFLEATFFAVMFFGWDKVSKGFHLLSTWCVAIGSNLSAFWILVANGWMQYPVGMS
                     FNPDTVRNEMQSFFEVALSPVAISKFLHTIGSGYVISALFVMGISAWFMLKGRHIIEA
                     KKSLVVGASFGLVCSIFLFFSGDESAYRVTQTQPMKLAVMEGVYQGENRAGLVPFGIL
                     NPKKTIDNNESVFLFDITIPYVLSILGNRDPNSFVPGIEDLIYGNESKGIEPMQNRID
                     RGKIAIQALKDYKLAKENNDTVAMASHKSILEANFKDFGYGYLEKPSDTIPPVALTFY
                     SFHIMVALGSFFFLLFIVTLYLTMANDIKKFRKVLWVCLLSIPLGYIAAEAGWIVAEV
                     GRQPWAIQDLLPVHIAATQLGKVNVQISFWIFAVLFTALLIAEVKIILTQIKKGFDAH
                     TGNAPLMGKGEK"
     gene            1841..2965
                     /gene="cydB"
                     /locus_tag="RTF91_001683"
     CDS             1841..2965
                     /gene="cydB"
                     /locus_tag="RTF91_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDZ4944535.1"
                     /translation="MFFGLELEGLQIYWWLILSLLGGLLVFMFFVQGGQTLIDELSKD
                     ELEKTMLVNSLGRKWELGFTTLVLFGGAAFAAFPLFYSTSFGGAYWAWLCILFCFILQ
                     AVAYEYRRKENNVYGSKTYEIFLKINGYLGVFLIGVAVSSFFSGSEFILNEHNFVSWQ
                     NPLLGLEFLLNPFNYLLGLALVFLARLLGAAYFMNNINDENIKIRAMKKLIINSILFL
                     PFFLAFLAWIFLKDGFSVDINGVVSMSANLYLHNFLNQMIFAVLLIMGVILVLLGMFQ
                     GAKGCSKAIFTLGFGTVLTVFALLSSIGLGQSAFYPSLSDLQSSLTLKNSSSSYYTLS
                     IMAYVSLLVPFVLAYIIYVWNAMDKVKITREEIANDDHAY"
BASE COUNT         1039 a          429 c          607 g         1307 t
ORIGIN      
        1 tttaaaatgt ttgatttttg ttgtttttaa aggtagaatt tatcatgcat cttaaacgct
       61 tatattttag tatctctcaa attttcaatt tttacaaaga aggttttaaa aatttaacat
      121 tagggaaaac cttgtggaaa attattttta tcaaactttt tgtaatgttt gtgattttaa
      181 aactttttgt ttttgatgta aattttaatt ctatttttaa aagcgacaaa gaaaaaagca
      241 cttttgtact caaaaatctt acactcgaag gaaaataaat gaacgaactt agtagcgttg
      301 attggtcaag agcacagttt gctttaaccg cactttatca ttttttgttt gtgcctttaa
      361 ctttaggctt atcttttatg attgctatca tggaaacaat ctatgtaaaa acaaaaaatg
      421 aaagatggaa aaaaatcaca aaattttggc tttcattgtt tgctataaat tttgctatcg
      481 gtgtggctac aggcattata atggaatttg aatttggaac gaattgggca aattatagct
      541 ggtttgtagg agatattttt ggtgcacctt tggcagttga aggtatcatg gcatttttct
      601 tagaagctac tttttttgcg gttatgtttt ttggctggga taaagtaagc aaaggttttc
      661 acttactttc aacttggtgt gtagctatag gaagtaatct ttctgctttt tggattttag
      721 tggcaaatgg ctggatgcaa tatcctgtag ggatgagttt taatcctgat acagtaagaa
      781 atgaaatgca aagctttttt gaagtggcgc tttctcctgt agctatttca aaatttttac
      841 atactatagg tagtggttat gtgatttcag ctttatttgt aatgggaatt tcagcttggt
      901 ttatgttaaa agggcgtcat attatcgaag ctaaaaaaag cttagttgta ggagctagtt
      961 ttggtttagt ttgttcaatc tttttgtttt tcagcggaga tgaaagtgct taccgtgtaa
     1021 ctcaaaccca acctatgaaa cttgcagtta tggaaggagt ttatcaaggt gagaatcgtg
     1081 caggacttgt gccgtttgga attttaaatc ctaaaaaaac catagacaat aacgaaagtg
     1141 tgtttttatt tgatattact ataccttatg ttctttctat actaggaaac cgtgatccta
     1201 attcttttgt tccaggaatt gaagatttaa tctatggaaa tgaaagcaaa ggcatagagc
     1261 ctatgcaaaa tcgtatcgat agaggaaaaa tcgcgataca agctctaaaa gactataaac
     1321 ttgctaaaga aaacaatgat acagtggcta tggcaagtca taaatccatt ttagaagcta
     1381 attttaaaga ttttggttat ggatatttag aaaaaccaag cgatactatt ccgcctgtgg
     1441 ctttaacctt ttatagcttt catatcatgg ttgcacttgg aagctttttc tttttacttt
     1501 tcatagtcac gctttatctt actatggcaa atgatattaa gaaatttaga aaagtacttt
     1561 gggtgtgttt attatctatt cctttaggct atattgccgc tgaagcaggt tggatagttg
     1621 ctgaagttgg cagacaacct tgggcaattc aagacttgct tcctgtgcat attgcagcaa
     1681 cacaacttgg aaaagtcaat gttcaaattt cattttggat ttttgcagtg cttttcacag
     1741 ctttattaat tgcagaagtt aaaatcatac ttactcagat taaaaaaggt tttgatgcgc
     1801 acacaggaaa tgctccactt atgggtaaag gagaaaaata atgttttttg gtttagaact
     1861 tgaaggttta caaatttatt ggtggttgat tttaagtttg cttggcggac ttttagtttt
     1921 tatgtttttt gtacagggtg gacaaacttt aatcgatgag ctcagcaaag atgaacttga
     1981 aaaaacaatg ctagtaaatt ctttaggacg taaatgggag cttggtttta ccactttagt
     2041 gctttttggc ggagcagctt ttgcggcttt tccacttttt tatagcacaa gttttggtgg
     2101 ggcttactgg gcttggcttt gtattttatt ttgctttatt ttacaagctg tagcttatga
     2161 gtaccgcaga aaagaaaaca atgtttatgg ttctaaaacc tatgaaattt ttcttaaaat
     2221 caatggttat ttaggtgtat ttttaatcgg tgttgcagta agtagctttt ttagtggttc
     2281 ggaatttatc ttgaatgagc ataattttgt ttcttggcaa aatcctttac tcggtttgga
     2341 gtttttactt aaccctttta attatctctt gggtttagct ttggtatttt tagcaagact
     2401 tttaggtgca gcgtatttta tgaataatat caatgatgaa aatatcaaaa taagagccat
     2461 gaaaaaactt ataattaata gtattttatt tttgcctttt ttcttagctt ttttagcgtg
     2521 gattttctta aaagatggtt ttagtgtaga tataaatggt gttgtaagta tgagtgcgaa
     2581 tttgtattta cataattttt taaatcaaat gatttttgct gttttactga tcatgggtgt
     2641 aattttagtg cttttgggta tgtttcaagg agcaaaaggc tgctctaaag ctatttttac
     2701 cttaggattt ggaacagttt taacagtttt tgctttatta tcaagcattg gtttaggaca
     2761 aagtgctttt tatccatctt taagtgattt gcaaagctct ttaactttaa aaaattcaag
     2821 ttcaagctat tacactttaa gcattatggc ttatgtatct ttgcttgtgc cttttgtttt
     2881 agcttatatt atctatgttt ggaatgcaat ggataaagta aaaatcacac gtgaagaaat
     2941 tgcaaacgat gatcacgcat attaaggaga gaaaatgtta catgctttat ttttattgac
     3001 ttggccttta gtaatttatc taagttataa atttattgta ctaaatatta atcaattaga
     3061 aaaagatagt aagctataaa gcaaagaaga tttaaaccga tataggaata aatcttttca
     3121 aaatattgca atttgcccat ttttgggcaa tcttttatta taaatctttt aaaattataa
     3181 tttctttacg attttgctga ataaaccttt ctttttaaaa caatcaaaat caagcactca
     3241 tttgctaaca tttatatttt tagaaagctt tttaaaatat gcttgttgta ttattaaatc
     3301 aaaattccgc ttgatttaaa ttataatctt tgaaaaaatt agtaattatt gttttttatc
     3361 tatgaaaaaa ttcctaaaat at
//
LOCUS       DAPWAA010000106         3373 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.107, whole genome shotgun sequence.
ACCESSION   DAPWAA010000106 DAPWAA010000000
VERSION     DAPWAA010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3373
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.107"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            119..796
                     /locus_tag="RTF91_001684"
     CDS             119..796
                     /locus_tag="RTF91_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HDZ4944536.1"
                     /translation="MEKLAVINGQNVSFEVVGDQTYTTSLDISNVFKKEHKNILAKID
                     ELPQDEFRELNFKLTERTAKFGAVFRSKPYYKITRDGFSLLVMGFTGEKAYKWKIEFI
                     KAFNEMEKRLRNIEYEKHDKLAFRQSLGYKSQLAQQKQKYENEIKALKYDLEQSKNNF
                     KDKLNCILAKNGLYAFDFKTFKNYALKLEKMLKDLKDDENKENKLLLRMQNDFLECLE
                     LYKSVNI"
     gene            1172..1354
                     /locus_tag="RTF91_001685"
     CDS             1172..1354
                     /locus_tag="RTF91_001685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944537.1"
                     /translation="MAIKKDLSGWYVFKNLGRFNGIKHFKGLIKMPNDYPLFRFDALR
                     SDNATFFYVNGDIYYN"
     gene            1486..2517
                     /locus_tag="RTF91_001686"
     CDS             1486..2517
                     /locus_tag="RTF91_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5309 family protein"
                     /protein_id="HDZ4944538.1"
                     /translation="MALPSMGHTAPATENVKLKQSIYETIIKIGATETPILNKIGTSK
                     VTNPLAHNWLTDTFEEPKKNANLELSKFVGETKNTTQKTTNATQIFITEAMVSKALLK
                     ANQYGGNEMEYQIGKKTKEHKMDIEYALFGLGRDDDVKKSVFKDYIQAQEATSGEMAG
                     LFHYIAKGKDSFENRKRGNVLAFDEAKDWSGEATELTEDKLNEILQTIWNSGVTPKDV
                     FLGADLKGAINKFATRILGNETKLAGQIVSLETDFGTVNFHMHRLLSPKYGLGDVLIA
                     GDFQYMKHGLYIPTMIEDVPTDITAKAKRFYTQSTLEVRNADAFAIGVGLTSGNNAKA
                     KAVLKAAKG"
     gene            2520..2924
                     /locus_tag="RTF91_001687"
     CDS             2520..2924
                     /locus_tag="RTF91_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002796938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944539.1"
                     /translation="MLCTTAKKLIIAKVKNSYKMIEDDKVLKAYFMEAFYYILSKCVP
                     SALLRNVEQDERVFRQVRNNHFLIIPDEPDFDNEKEHLMIDETLSFAVINYVCYLITR
                     CEEKDFLALCDKIIYEYIANDGKEFDDERTWL"
     gene            2905..3099
                     /locus_tag="RTF91_001688"
     CDS             2905..3099
                     /locus_tag="RTF91_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944540.1"
                     /translation="MREHGCNCNFTKKFNRALSYEDYIQSINSADFIAYLDDKKWLLA
                     MDDLLFFCEKRIKDSDYYKG"
     gene            3102..>3373
                     /locus_tag="RTF91_001689"
     CDS             3102..>3373
                     /locus_tag="RTF91_001689"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944541.1"
                     /translation="MGTSLNELKTGREKLEIINQVLARISSISEAIDNTRLDEVIGLK
                     QACEALKNECLNFKNDITNKNDDILIKYNDIDKKYSKINEKYNDVNT"
BASE COUNT         1397 a          368 c          587 g         1021 t
ORIGIN      
        1 aaaaaataat tataaaaaaa tgtattttat gcttgacata tattataaaa agtgtataat
       61 cactgcataa aagttataaa ataattaact tttataaatc aaaacaaaaa ggtaaaaaat
      121 ggaaaaatta gctgttataa atggacagaa tgtgagtttt gaagtggttg gcgaccaaac
      181 ctacaccact tcattggata tttccaatgt gttcaagaaa gaacacaaga atattttagc
      241 aaaaattgat gaattaccgc aagatgaatt ccgtgagctt aattttaagc ttacggagag
      301 aacagctaaa tttggggcag tttttagaag caaaccctat tataaaatca ctcgcgatgg
      361 tttttctttg cttgttatgg gttttacagg cgaaaaggct tataaatgga aaatcgagtt
      421 tatcaaagct tttaatgaaa tggaaaaaag actaagaaat attgaatatg agaagcacga
      481 taagttagct tttagacaga gcttaggtta caaatctcag ttagcacagc aaaagcaaaa
      541 gtatgaaaat gagattaaag ctttaaagta tgatttggaa caaagtaaaa acaattttaa
      601 agataaatta aattgtatat tggctaaaaa tggtttatat gcctttgatt ttaaaacttt
      661 taaaaattat gccttaaagc tagaaaaaat gttaaaagat ttaaaagatg atgaaaacaa
      721 agagaataaa ctacttttaa gaatgcaaaa tgatttctta gaatgtttag aactttataa
      781 aagtgtaaat atctaattta tttcaaaaca cactatattt gaaatagtca tttttggaaa
      841 aatctttaaa actaaactaa ggagaattca aaaatggcct taccttaaaa gagtattcta
      901 aggtggctaa tagcatagaa aacaagtgaa gataaataaa tattttaaaa cgaaaataag
      961 attaaaaagg aggaaaaatg aatgcaatgt tattagcaga taatggtatt atgattgata
     1021 cggggggggg attaagagtt ttaataacca tagacattta tatgatgaaa aatccaacac
     1081 aaatggtaat actttaactt attcagcaaa taatgaaatt ttttataata tcagcataga
     1141 tacaaaagga aatcttagaa cggtatatat catggctatt aaaaaagacc ttagtggctg
     1201 gtatgtattt aaaaacttag gaagatttaa tgggataaaa cattttaaag gtttaattaa
     1261 aatgccaaat gattatcctt tgtttagatt tgatgccctt agaagtgata atgcaacctt
     1321 tttttatgta aatggggata tttattacaa ttagaaggac aacaatgaag aataaacgct
     1381 aaaaccataa aattatataa aaatacttaa atcatttcaa aatgccctag ttttgaaata
     1441 aagtttttaa ataaactcct tgaaaaatta ttttaaggag aaaaaatggc tttaccttca
     1501 atggggcata cagctcccgc aacggaaaat gttaagttaa aacaatcaat atacgaaacc
     1561 attattaaaa tcggagccac tgaaacacca attttaaata aaataggcac ttcaaaagtt
     1621 accaatcctt tggctcataa ttggcttact gatacttttg aagaaccaaa aaagaatgca
     1681 aatttagagt taagtaaatt tgtaggtgaa acaaaaaata ctactcaaaa aacaacaaat
     1741 gctactcaaa ttttcatcac cgaagctatg gtatcaaaag ctttgctaaa agcaaaccaa
     1801 tatggtggca atgaaatgga gtatcaaata ggcaaaaaaa ccaaagaaca taaaatggat
     1861 atagaatatg ctttatttgg tttgggtagg gatgatgatg taaaaaaatc agtttttaaa
     1921 gattatatcc aagcacaaga ggcaacaagt ggtgaaatgg caggactttt tcactatatc
     1981 gctaaaggaa aagatagttt tgaaaataga aaacgtggaa atgtattagc ttttgatgag
     2041 gcaaaagatt ggagtggaga ggcaacagaa ctcacagaag ataaactcaa tgaaattttg
     2101 caaactattt ggaatagcgg agttacgcct aaagatgtgt ttttaggagc tgatctaaaa
     2161 ggagctatta ataaatttgc tacaagaatt ttaggaaatg aaacaaaatt agcaggacaa
     2221 atagtaagcc ttgaaactga ttttggaaca gtaaattttc acatgcatag attattaagt
     2281 cctaaatacg gcttaggaga tgttttaatc gctggtgatt ttcagtatat gaaacatgga
     2341 ctttatattc ctactatgat tgaagatgtt ccaactgata ttactgcaaa ggcaaaaaga
     2401 ttttatacac aaagtacttt agaagtaaga aatgcagatg cttttgctat aggtgtggga
     2461 ttaactagtg ggaataatgc aaaggctaaa gcagttttaa aagcagcaaa aggttaataa
     2521 tgctttgtac tacggctaaa aaattaatta tcgctaaggt taaaaattct tacaaaatga
     2581 tagaagatga taaagtttta aaagcctatt ttatggaagc gttttattat attttatcaa
     2641 aatgtgtacc tagcgcactt ttaagaaatg tagagcaaga tgaaagagtt tttaggcaag
     2701 ttaggaataa tcattttttg attattcctg atgagcctga ttttgacaac gaaaaagaac
     2761 atctaatgat agatgaaaca cttagttttg ctgtgattaa ttatgtttgt tatttgatta
     2821 caagatgtga agaaaaagat tttttagcat tatgcgacaa gataatttat gagtatatag
     2881 ctaatgatgg caaggagttt gatgatgaga gaacatggtt gtaattgtaa tttcacaaag
     2941 aaatttaata gagctttgag ctatgaagat tatatacaaa gtataaatag tgctgacttt
     3001 atagcttact tagatgataa aaaatggctt ttggctatgg atgatttact tttcttttgc
     3061 gaaaaaagaa ttaaagacag tgattattat aaaggttgaa aatgggaaca agtttaaacg
     3121 aattaaaaac gggtagagaa aaacttgaaa tcataaatca agttttagca agaataagta
     3181 gcatttcaga agcgatagat aatacaagac ttgatgaagt tataggattg aaacaagctt
     3241 gtgaagcatt aaaaaatgag tgtttaaact ttaaaaatga tattacaaac aaaaatgacg
     3301 atattttaat caaatataat gatattgata aaaaatattc aaaaataaat gaaaaatata
     3361 atgatgtaaa tac
//
LOCUS       DAPWAA010000107         3301 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.108, whole genome shotgun sequence.
ACCESSION   DAPWAA010000107 DAPWAA010000000
VERSION     DAPWAA010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3301
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.108"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            15..749
                     /locus_tag="RTF91_001690"
     CDS             15..749
                     /locus_tag="RTF91_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944542.1"
                     /translation="MSNEVVLKEENKLEINFNPYELALVKGDLSKLSDVERASYVKNL
                     CESLGLNMLTKPFEYIVLNGKLTLYANKSATDQLRQIRKVSITKTEVAQVGDIYMVTA
                     YAATPDGRTDCDTGALNIKNLGGDNLANAIMKAITKAKRRVTLSICGLGMLDESELET
                     IKEKRFLNPNEDLKVWGSDEKAIENKAKELKVLGAELRQFMSDNGLNTQEQNNFIKKH
                     SLFTSEKIQEVLSNKDEFLTQLKGEL"
     gene            749..1435
                     /locus_tag="RTF91_001691"
     CDS             749..1435
                     /locus_tag="RTF91_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944543.1"
                     /translation="MLPAFKASFEVANYAPSVEYLSEGGLYSGVFRKAFLYDKLASDG
                     SNNTFICFEFLTRKEQKLAIFNLFVAKNNDFSYINKNGEKENYLGFRQLNAIMKFFGI
                     DELDFSEKGNENIFGIQTEVIYLNSLVNKLLVLGFGTEEYLSKNGELANKIFLDRIFN
                     EKMQSMDEFQNNKEPLSIKSFKARHKSLNNNNNKSFIPKENQSYDPYANSNKDEKYIE
                     LKEDDENLPF"
     gene            1473..1898
                     /locus_tag="RTF91_001692"
     CDS             1473..1898
                     /locus_tag="RTF91_001692"
                     /inference="COORDINATES: protein motif:HMM:NF021182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944544.1"
                     /translation="MKLSEFDFRIWNNETSKYETNSTFITVLMSDMSKGLKEPYMNDL
                     EIELWTGFYDKNGKKIYEGDIIKSYEQNEYFNKTHVVEFGFMHGISFTHFLNKDKSIS
                     LEPFEIFGFEPTWYPGKPIQVMEVIGNIHENSELLINKE"
     gene            1919..2010
                     /locus_tag="RTF91_001693"
                     /pseudo
     CDS             1919..2010
                     /locus_tag="RTF91_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108960.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
     gene            2054..2460
                     /locus_tag="RTF91_001694"
                     /pseudo
     CDS             2054..2460
                     /locus_tag="RTF91_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826569.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2462..2686
                     /locus_tag="RTF91_001695"
     CDS             2462..2686
                     /locus_tag="RTF91_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002802301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDZ4944545.1"
                     /translation="MEKENIVKKVCKELNITQRQLSEMLEIPESTIARWKSGDLPRLT
                     ELFLKTMLENIELKRKLETIKKAHKIISEL"
     gene            2852..>3301
                     /locus_tag="RTF91_001696"
     CDS             2852..>3301
                     /locus_tag="RTF91_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944546.1"
                     /translation="MCQITRSFLNTEVAYNYAVDNTTIMSHKNLHSDELIENVHYFYD
                     YEQTKGGRQRVIKWTLEGVYMLGFFIKSPKAKEYRKKVAKLLREQTQARFKTLSDENQ
                     RLNSLNHHQKLGYKSQLAQQKEHYENKIKALKYDLEHKNELSFKRKLS"
BASE COUNT         1385 a          382 c          561 g          973 t
ORIGIN      
        1 taaggagatg aaaaatgagt aatgaagttg tattaaaaga agaaaataaa ttagaaataa
       61 attttaatcc ttatgagttg gctttggtaa agggtgattt atcaaagctt agcgatgtag
      121 aacgagcaag ctatgttaaa aatctttgcg aaagtttggg tttaaatatg cttactaaac
      181 cttttgaata catagtatta aatggaaaac ttactttata cgcaaacaaa tcagcaacag
      241 atcaactaag acaaatcaga aaagtaagta ttacaaaaac agaagtggca caagttggcg
      301 atatctatat ggttacagcc tacgcagcaa caccagatgg aagaactgat tgcgatacag
      361 gtgctttaaa tattaaaaat ttaggtggcg ataatttagc aaacgcaata atgaaagcta
      421 tcacaaaagc aaaaaggcgt gtaaccttaa gtatttgcgg acttggaatg cttgatgaga
      481 gcgaattaga aacaatcaag gagaaacgct ttttaaatcc caatgaagat ttaaaagttt
      541 ggggtagtga tgaaaaagct atagaaaata aagcaaaaga attaaaagtt ttaggtgcag
      601 aacttagaca atttatgagc gataatggtt taaacaccca agaacaaaat aattttataa
      661 aaaaacattc tttatttaca agtgaaaaaa tacaagaagt tttaagtaat aaagatgaat
      721 ttttaacaca attaaaagga gaattataat gttaccagca tttaaggcaa gttttgaagt
      781 ggcaaattat gctccaagcg tagagtattt aagtgaaggt gggctttata gcggagtttt
      841 ccgcaaagcc tttttatatg ataaattagc aagtgatgga agcaataata cttttatttg
      901 ttttgaattt ttaactagaa aagaacaaaa attagctatt tttaatcttt ttgtagctaa
      961 aaataacgat tttagctaca tcaataaaaa tggagaaaaa gaaaactatc taggttttag
     1021 acaattaaat gctattatga aattctttgg aattgatgag cttgatttta gtgaaaaggg
     1081 aaatgagaat atttttggaa ttcagactga agttatttat ctaaattctt tagttaataa
     1141 acttttagtt ttaggttttg gaacagaaga atatttaagt aaaaatggag aacttgctaa
     1201 caaaatcttt cttgatagga tttttaatga aaaaatgcaa agtatggatg agtttcaaaa
     1261 caataaagaa cctttatcta taaaatcttt caaggcaagg cacaaatctt taaataataa
     1321 caataataaa tcctttattc caaaagaaaa tcaaagctac gacccttacg caaattcaaa
     1381 taaagatgaa aaatatatag aattaaagga agatgatgaa aacttaccat tctaaaatag
     1441 ctttgagcaa tataaatttt aaaggataaa cagtgaaatt aagtgaattt gattttagaa
     1501 tttggaataa tgagacaagt aagtatgaaa ctaattctac gtttattaca gttttgatga
     1561 gtgatatgtc aaaaggactt aaagagccct atatgaatga tttagaaata gaactttgga
     1621 caggatttta tgataaaaat ggaaagaaaa tttatgaagg agatattatt aaaagttatg
     1681 aacaaaatga atattttaat aaaactcatg tagtagaatt tggctttatg cacggaatta
     1741 gttttactca tttcttaaac aaagataaat caatatcact tgaacctttt gagatatttg
     1801 gatttgagcc tacttggtat cctggaaagc ctatacaagt tatggaagtt attggcaata
     1861 tccatgagaa tagtgaatta ttaataaata aggagtgaaa atggcaacta gatttaaacg
     1921 caaggcttat ggctttgaaa ttaaaaagag ttctttaaga gtgctaatga aattatattt
     1981 aaacacatag aaagaagtct atttgcttaa gtaaagtttt gataaaatta caaaaacaaa
     2041 agaaaggagt aatatggcag aagagaagct actaaaatct ttggcagatg gtgttttaaa
     2101 aataaatgaa agctctattg atgtggcagt tttagaaaat ggagtaagaa ttattaccca
     2161 tagcggagta tttagagcct taggaagaga accaagagga aatgcaaggc tagatcaaat
     2221 acccgctttt atggatgcaa aaaatctcca accgttgatt cttcggaact taaaactcag
     2281 atcagccgaa tttcatattt agataaaaac agcaaagtta aagaaggtta taatgcggat
     2341 atattaccct tagtggctga tttatattta aaagcaagag aagaaggtat tttaacccaa
     2401 gcacaaatag aaacagcaaa aaaagcagag tttagattta ttacagatga aaaggaataa
     2461 aatggagaaa gaaaacattg ttaaaaaggt ttgcaaagag ttaaacatta ctcaacgaca
     2521 actaagcgaa atgttagaaa tcccagaaag tactatagca cgttggaaaa gcggagattt
     2581 gccacgactt acagaacttt ttttaaaaac aatgcttgaa aatatagaat taaagcgaaa
     2641 gttagaaaca atcaaaaaag ctcataaaat aatatcagaa ttataaggat atggaaattt
     2701 tccacaccct ttattttcat ttttggcaaa tattttagaa taatttatca aaaatgaata
     2761 aaatatattg acaaactttc ataaataata tataatttcc ttaaatattt tcaaaaatga
     2821 aaggtttaag atgaatttat tacaatgtga aatttgtcaa atcactagaa gttttttaaa
     2881 tacagaagtt gcatataact acgcagtaga taacactaca ataatgtctc acaaaaattt
     2941 acactctgat gaactcatag aaaatgtaca ttatttctac gattatgagc aaaccaaagg
     3001 cggaagacaa agagtaatca aatggacttt agaaggtgtt tatatgcttg gcttttttat
     3061 caaaagccct aaagctaaag aataccgcaa gaaagtagct aagcttttaa gagagcaaac
     3121 acaagctaga tttaaaaccc taagcgatga aaatcaaagg cttaattctt taaatcatca
     3181 tcaaaaatta ggttataaat ctcagttagc acaacaaaag gaacattatg aaaataaaat
     3241 taaagcttta aagtatgatt tagaacataa aaacgagtta agttttaaaa gaaaacttag
     3301 t
//
LOCUS       DAPWAA010000108         3243 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.109, whole genome shotgun sequence.
ACCESSION   DAPWAA010000108 DAPWAA010000000
VERSION     DAPWAA010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3243
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.109"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..787)
                     /locus_tag="RTF91_001697"
     CDS             complement(<1..787)
                     /locus_tag="RTF91_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDZ4944547.1"
                     /translation="MQKDNLIAFVIFIISTIAFVIWGFGYISQHQLILFILASIFGIF
                     MAFNIGGNDVANSFGTSVGAKTVTIKQALIIAAVFELSGAIFAGAEVTKTIRSGIVIF
                     PNSLDSMLFVIIMLAALLSSGVWIFIATKKGLPVSTTHSIVGGIVGASIMMGLLKFDG
                     IQTLSMIKWSEILKIAISWIASPLLGGIVAYIIYSYIDKKILKPSEKLNDDFKNIKKE
                     RKKFKEKYFLNLKTKSQEEQIKELSAIVLDEEEQENNFYRNKIK"
     gene            935..1738
                     /locus_tag="RTF91_001698"
     CDS             935..1738
                     /locus_tag="RTF91_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter beta-barrel
                     domain-containing protein"
                     /protein_id="HDZ4944548.1"
                     /translation="MRGIFYIMVFFSLLNADELEEALARNNNQNSWEHFDCKNTKEVP
                     KIQEENVDFKSTFGSLLSKTLENNNGIDKTDGNLDFQNKNVQVKNLNSLYEGENNSLL
                     FQKELFVAQDSYNYSGGLINRYEKDNFLFGVNGFIDKQKEQKDTKSFGTEFRYSKFIK
                     TYSNYYIPNKAEKKLQLGMSFVIPTYTAFIFNISKDNDKTNYQASYSPYSVFSLNLLR
                     RDYSARETVDDVIQVGFSFNFNESFLKQFRKKDNTLEEVNRYDFLQRVH"
     gene            complement(1735..3111)
                     /locus_tag="RTF91_001699"
     CDS             complement(1735..3111)
                     /locus_tag="RTF91_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HDZ4944549.1"
                     /translation="METLSQTFAERKPPLYKRIVKSLGFWVIIGIITGIVLGYADKEL
                     AIASKPGVDYFIRTLKVLIGPIIFVTLVLGIISLESLKKVGSIGAKAVIYFEVVSTLA
                     LAIGIFMANIMQPGHGMNLDPSQLDTKSVQKYISQTTEVSASSEIMHILKDAMPTDII
                     TPFTEGKTLQVLVIAIITALIISLMRKEDKQAIQRVFEVVQNFVFKILQIIMYFSPIA
                     AFSAMAVLIAQYGIGSLINLAYLLLVMLISCLVFIFGILGLICYFAKVNIFKFMRFIS
                     REVLIVFATSSSESALAPLMRKLEKAGLSKATVGLVLPTGYSFNLDCTNIYLAMSLIF
                     LAQAFNVNLSLAHEISILIVLMIASKGAVGVTGSGFIVLGSTLAALGNMEISEANATL
                     AQVLPVATIGVLLGVDKFMSEMRAVGNLCGNSVAALIVAIWDKQIDWEKFRYAMDNPE
                     KFHNAGMN"
BASE COUNT         1173 a          493 c          445 g         1132 t
ORIGIN      
        1 tttttatttt atttctatag aaattatttt cttgttcctc ttcatctaaa actatggcag
       61 aaagttcttt gatttgttct tcttgagatt ttgtttttag atttaaaaaa tacttttctt
      121 tgaatttttt tctttctttt ttgatatttt taaaatcatc atttagtttt tctgatggtt
      181 ttaaaatttt cttatcaatg tatgaataaa taatataagc tacaatccct cctaaaagag
      241 gagaagctat ccaagaaata gctattttta aaatttcact ccatttaatc atagagagtg
      301 tttggattcc atcaaatttt aaaagtccca tcataatgct agcacctaca atcccaccaa
      361 ctatgctatg tgtggttgat acaggtaatc cttttttggt tgcaataaaa atccaaaccc
      421 cagaacttaa aagcgcagca agcataatga taacaaaaag catagagtct aaagaatttg
      481 ggaaaataac aataccactg cgtatagttt tagtaacttc tgcgcctgcg aagattgctc
      541 cacttagttc aaaaacagct gctatgatta aagcttgttt aatggttact gtttttgcgc
      601 caacgcttgt tccaaaagaa ttggctacat catttccacc tatattaaat gccatgaaaa
      661 taccaaatat agaagcaaga ataaaaagaa tcagttgatg ttgcgaaata tagccaaatc
      721 cccaaatgac aaatgcaata gtgctaataa taaaaataac aaaagctata aggttgtctt
      781 tttgcattaa taaccttttt tattttaatt atacacttat ttattaaatt tgttaatttt
      841 attttagtct ttgtgcatcc taaagatatt ttatttatat tattttttta taataaatgc
      901 ttatatataa gaaataatga ggaatacaag aacaatgagg ggtatttttt atataatggt
      961 atttttttct ttgctcaatg ctgatgaact tgaagaggct ttagcaagaa ataataatca
     1021 aaattcttgg gaacattttg attgtaaaaa taccaaagaa gttccaaaaa ttcaagaaga
     1081 gaatgtggat tttaaaagta cttttggtag tttactttca aaaactttag aaaataacaa
     1141 tggtatagac aaaacagatg ggaatttaga ttttcaaaat aaaaatgtgc aagttaaaaa
     1201 tttaaattct ctttatgagg gagagaataa ttctttactt tttcaaaaag aactttttgt
     1261 agcccaagat agttacaatt attcaggagg cttgattaat cgttatgaaa aagataattt
     1321 tttgtttgga gttaatggtt ttatagacaa acaaaaagaa caaaaagata ctaaaagttt
     1381 cggcacagaa tttcgttata gtaaatttat aaagacttat agtaattatt atatacctaa
     1441 taaagcagaa aaaaaattac agcttggaat gagttttgta attccaactt ataccgcttt
     1501 tatttttaat ataagtaaag ataatgataa aactaattat caagcgtctt attctcctta
     1561 tagtgtattt agcttaaatt tattacgccg tgattatagc gcaagagaga ctgttgatga
     1621 tgttattcaa gttggattta gttttaattt taatgaaagt tttttaaagc aatttagaaa
     1681 aaaagataat actttagagg aagttaatcg atatgatttc ctccaaagag tccattagtt
     1741 cattccagca ttgtggaatt tttccggatt atccatagcg tagcggaatt tttcccagtc
     1801 aatttgttta tcccagattg caacaatcaa agctgctact gaatttccgc aaagatttcc
     1861 aactgctctc atttcagaca taaatttatc aacacctaaa agaacaccta tagtagctac
     1921 cggcaaaact tgcgccaaag tcgcatttgc ttcagaaatt tccatatttc ctaaagctgc
     1981 aagtgtactt ccaagcacta taaaacctga tccagttaca cctactgcgc cttttgaagc
     2041 tatcattaat actattaaaa tgctgatttc gtgtgctaag cttaaattta cattgaaagc
     2101 ttgtgctaga aaaattaaac tcatagctag ataaatattt gtacaatcaa gattaaaact
     2161 atatcccgtt ggtaaaacaa gtccaactgt tgctttggaa agtcctgctt tttctagttt
     2221 tctcattaaa ggagcaagtg cagactcact tgagctagtt gcaaaaacga tcaatacctc
     2281 tcttgagata aatctcataa atttaaagat atttactttt gcaaaataac aaatcagacc
     2341 caaaattcca aatataaaaa caagacatga aatcagcatt actaagagta aataagctaa
     2401 attgattaaa gatccaattc catattgagc tataagtaca gccatcgctg aaaaggcggc
     2461 aataggacta aaatacataa taatttgcaa aattttaaaa acaaaatttt gcaccacttc
     2521 aaaaactctt tgaatggctt gcttatcttc ttttctcatt aaagaaataa tcaaagcagt
     2581 aattatagca ataactaaaa cttgtaaggt ttttccttct gtaaagggcg tgatgatgtc
     2641 agtaggcata gcatctttta aaatatgcat aatttcagaa cttgcgctta cttctgtagt
     2701 ttgagaaatg tatttttgaa cacttttagt atctagttga cttggatcaa gattcattcc
     2761 atgacctggt tgcataatat ttgccataaa aatacctata gcaagtgcta aagtgcttac
     2821 aacttcaaaa taaataactg ctttagcacc aatactacct acttttttta aactttcaag
     2881 actaatgatt cctaaaacca aggtaacaaa aataataggc cctataagaa cctttaaagt
     2941 tcttataaaa taatcaaccc ctggtttact agcaatggct aattccttat ctgcatagcc
     3001 aagtacaata cctgtaataa tacctatgat tacccaaaat ccaagacttt ttacaatgcg
     3061 tttatataaa gggggttttc tttcagcaaa agtttgactt aaagtttcca aatttatttg
     3121 ctccttttga tatttttagt gttgattttc attaaaatac aattttaaat cattcatatt
     3181 tttaaatttt aacaaaaaaa taaatttaaa aacactttct tttgtaatgt gaaaatattt
     3241 att
//
LOCUS       DAPWAA010000109         3184 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.110, whole genome shotgun sequence.
ACCESSION   DAPWAA010000109 DAPWAA010000000
VERSION     DAPWAA010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3184)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3184)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3184
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.110"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            138..1055
                     /locus_tag="RTF91_001700"
     CDS             138..1055
                     /locus_tag="RTF91_001700"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDZ4944550.1"
                     /translation="MKKIIFMGTPSYATCVLRAILENDNFKLVALFTQPDKAVGRKKI
                     LTSSHTKTFLSKNYPDIPVFTPKFLKDEKVIAQIRSLKPDFIVVAAYGKILPKAILDL
                     APCVNLHASLLPKYRGASPIQSAILNKDEKSGVCTMLMEEGLDTGAVLESLECDIKDK
                     NSSEVFELLANLAAKLISSTLLNFEKIIPKKQDESLATICKKIKKEDGLVNLENAREL
                     YQKYLAFTPWPGVFLENGLKFLELELVDELKQNAKMGEILELEKESFLLACKQGVLRI
                     KKLQESGKKALDGRTYLNGKRLKSADSLC"
     gene            1036..1671
                     /locus_tag="RTF91_001701"
     CDS             1036..1671
                     /locus_tag="RTF91_001701"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009881757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDZ4944551.1"
                     /translation="MQIVCVERIDSTHLFLCEQIRSGKIDENFAIYALEQTDGVGSRE
                     NSWQSSKGNLHLSFCIKEEDLPQDLPLASVSIYFAYLLKEVLQEKDSKIWLKWPNDLY
                     LYDKKAGGVISAKISNFIIGGMGLNLKFAPQNTALCDIEISLKDLVSKFLQKVEKKFL
                     WKNIFSKYMLEFEKSRKFSVHHEGKVFSLENSFLYEDGSILLGDKRVYSLR"
     gene            1668..2453
                     /locus_tag="RTF91_001702"
     CDS             1668..2453
                     /locus_tag="RTF91_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004278029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDZ4944552.1"
                     /translation="MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQAN
                     ATTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELPQLHLAPSNIGLVGIEQELAKGE
                     NNEKKMLLKNQIQEVIDEYDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGV
                     AMVLNTIKIIKKTINPKLKVRGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGDED
                     DFIVIPRNVKLAESPSFGKPIILYDIKSPGSVAYQNLAYSILG"
     gene            2457..>3184
                     /locus_tag="RTF91_001703"
     CDS             2457..>3184
                     /locus_tag="RTF91_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDZ4944553.1"
                     /translation="MGLNKDRGLSSLISDMDTIYSKELGFDKNQSTMIEIDKISPNPF
                     QPRKNFDQEALDELANSIKEFGLIQPIIVFKKNDKFILVAGERRLRAVKALGKKEILA
                     FIADIDENKLRELALIENIQRENLNPIELANSYKDLMQVYKITQENLAELIHKSRTQI
                     TNTLRLLNLDIRTQELIASGKISQGHAKVLVGLDQKDERMLVDSIIGQKLNVRDTEKI
                     VKKIKNNENLSNQEFEDEIKKLKQ"
BASE COUNT         1173 a          389 c          556 g         1066 t
ORIGIN      
        1 ttttgacttt tcttaattta aagaatttat ctcattttaa tctttcaaga tgggataaat
       61 tctatgtata aaaattaaat cctattttaa attcaaattt gttattattt ttgtaaattt
      121 ttatagaatg tggatagatg aaaaaaatta tttttatggg aactccttct tatgctactt
      181 gtgttttaag agctatttta gaaaatgata attttaaact tgtagcactt ttcacccagc
      241 ctgataaagc tgtaggtaga aagaaaattt taacttcaag tcatactaag acttttttaa
      301 gcaagaatta tcctgatatc cctgttttta ccccaaagtt cttaaaagat gagaaggtca
      361 tagcacaaat tcgttcttta aagcctgatt ttatcgtggt tgctgcctat ggaaaaattt
      421 tacctaaagc cattttggat ttagcacctt gtgtgaattt acacgcttct ttacttccaa
      481 aataccgcgg cgctagcccg attcaaagtg ccattttaaa taaagatgaa aaaagtggag
      541 tttgtacaat gctcatggaa gaaggacttg acacaggtgc tgtacttgaa agcttagaat
      601 gtgatataaa agataaaaat tcaagcgaag tttttgaact tttagcgaat ttagcagcta
      661 agcttataag ttcgactctt ttaaattttg aaaaaattat ccctaaaaaa caagatgaga
      721 gtctagcaac gatttgtaaa aaaatcaaaa aagaagatgg gcttgtaaat ttggaaaatg
      781 caagagagct ttatcaaaaa tatctagctt ttactccttg gcctggagtt tttttagaaa
      841 atggacttaa atttttagaa cttgaacttg tggatgaatt aaaacaaaat gctaagatgg
      901 gtgaaatttt agagttagaa aaggaaagtt ttttgcttgc ttgtaaacaa ggagttttgc
      961 gcattaaaaa acttcaagaa agtggaaaaa aagctcttga tggcaggact tatttaaacg
     1021 gaaaaaggct taaaagtgca gatagtttgt gttgaaagaa tagattcaac ccatcttttt
     1081 ttatgcgagc aaatacgcag tggaaagatc gatgaaaatt ttgctattta tgctttagaa
     1141 caaacagatg gagttggaag tagagaaaat tcttggcaaa gctctaaagg aaatttacat
     1201 ctttcttttt gcattaaaga agaagattta cctcaagact tacctttggc ttctgtgagc
     1261 atttattttg cttatttgct caaagaagtt ttacaggaaa aagattctaa aatttggctt
     1321 aaatggccta atgatttata tttgtatgat aaaaaagccg gaggtgttat aagtgccaaa
     1381 atttcaaatt ttattatagg aggtatgggt ttaaatctta aattcgcacc tcaaaataca
     1441 gctttatgtg atatagaaat ttcgcttaaa gatttagtga gcaagttttt gcaaaaagta
     1501 gaaaaaaaat ttttatggaa gaatattttt agcaagtata tgttagaatt tgaaaaatca
     1561 agaaaattta gcgtccatca cgaaggcaaa gttttttcgc ttgaaaattc ttttttgtat
     1621 gaagatggtt caattttact aggtgataaa agggtgtata gtttaagatg agcgaaatta
     1681 ttacaatagc aaatcaaaaa ggtggggttg gtaaaacaac cacggcggta aatttagctg
     1741 cttctttagc agtagcagaa aaaaaagtgc ttttgattga tgttgatcct caagcaaatg
     1801 ctaccacagg acttggtttt aatcgtaata attatgagta taatatttac catgttttta
     1861 taggcagaaa aaagctttca gatattattt taaaaacaga attaccacaa cttcatttag
     1921 ctccttcaaa tataggtctt gtaggtatag agcaagaact tgctaaaggt gaaaataatg
     1981 agaaaaaaat gttgcttaaa aatcaaattc aagaagtgat tgatgaatat gattttatca
     2041 ttattgattc tccacctgct cttggaagta tcactataaa tgcttttgca gctagtgata
     2101 gtgtaatcat ccctatacaa tgtgagtttt atgcgcttga aggggtagca atggttttaa
     2161 atacaattaa aattatcaaa aaaactatta atcctaagct caaagttcgt ggatttttgc
     2221 cgacaatgta tagttctcaa aataatcttt ctaaagatgt tgtagatgat ttaaaacaga
     2281 attttaaaaa acaacttttt accattaatg gagacgaaga tgattttatt gtgatccctc
     2341 gcaatgtaaa acttgcagaa agtccaagtt ttggaaagcc tataattctt tatgatatta
     2401 aatccccagg ttctgttgct tatcaaaatt tggcgtattc tatattagga taattaatgg
     2461 ggttaaataa agacagaggt ttaagtagtt taatcagtga tatggatact atttacagta
     2521 aagaattggg ttttgataaa aatcaaagca ctatgataga aattgataaa atttcaccta
     2581 atccatttca accaagaaag aattttgatc aagaagcttt agatgagctt gctaattcta
     2641 tcaaagaatt tgggcttatt cagcctatta ttgtatttaa gaaaaatgat aaatttattt
     2701 tggttgccgg agaacgtcgt ttaagagcag tgaaggcatt aggaaaaaaa gaaattttag
     2761 cttttattgc tgatattgat gagaataagc ttagagaatt agctcttatt gaaaatatac
     2821 aaagagagaa tttaaatcct attgaacttg ctaattctta taaggatttg atgcaagttt
     2881 ataaaattac tcaagagaat ttagcagaac ttattcataa atctcgcact caaataacaa
     2941 atactttaag actcttgaat ttagatatta gaactcaaga gttgattgct tctggaaaaa
     3001 tctctcaagg tcatgctaag gttttggttg gtttagatca aaaagatgaa agaatgttag
     3061 ttgatagtat aataggtcaa aagcttaatg ttagagatac tgaaaaaata gttaaaaaaa
     3121 taaaaaataa tgaaaattta tctaaccaag aatttgaaga tgaaataaaa aaattaaaac
     3181 aaat
//
LOCUS       DAPWAA010000110         3006 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.111, whole genome shotgun sequence.
ACCESSION   DAPWAA010000110 DAPWAA010000000
VERSION     DAPWAA010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3006
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.111"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(360..1136)
                     /gene="icmH"
                     /locus_tag="RTF91_001704"
     CDS             complement(360..1136)
                     /gene="icmH"
                     /locus_tag="RTF91_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IVB secretion system protein IcmH/DotU"
                     /protein_id="HDZ4944554.1"
                     /translation="MREIINEEKKALSLLLDSNFDGLKNNKIIDYSLELLLLSYRLSK
                     ISSIDTSNINQLRETLINKILDITAKLSMCKEYDEKEIIKFKYCLCVFIDESLMKNEL
                     FINFWAHNTLTVRLFDETLGGNNFYDIASSWINNPFKFKDFLEFVYACLILGYKGKYN
                     EAKDRDEKIIHFCNNIAASLRPVYKVEEELAFNKAYRTGLKENIWQKFIRLYFKKIII
                     IVPMLIILGVLSYTIFNLETNNIKMDNNISMLIKNLNLSK"
     gene            complement(1133..2530)
                     /gene="tssK"
                     /locus_tag="RTF91_001705"
     CDS             complement(1133..2530)
                     /gene="tssK"
                     /locus_tag="RTF91_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssK"
                     /protein_id="HDZ4944555.1"
                     /translation="MANKLKVAWFDGLNIGQTHFEQQERFFSRNIDLKTINIYSNLYG
                     IIDLEFSQEMLLQGKIALSKISGIAQDGSIFNAPEQDLLPEPIEINYESLIDSIVVLK
                     IPMGVTDIADLSLRNSFPNSKYVCLRNSIALRNYDDSKSNAMDKIEDEYELENLTFTQ
                     EKKDLLLASLRLKLGILGNSTPDELELPIAKIKNIDINKKIELESDFIPTCLNISKIS
                     TIRSFLEEIIFSINQHKKVLSNIFKGIDQTKNTLDFSTFLSLNLLKKWYLIFSHLSKK
                     DKIHPEFLYEKFLEFQGELAAFSNEESFLDFIPYKHDNLYNTFLNMMNNLRLLFSKIT
                     SPKYFIAKTSINGNGFYDFIFDNSGILEDAEIYFAVRAEVTTEYLLNNFKIQSKIHTQ
                     SKIKNIVATQLEGLNIDQVPNVPSSIPYLNGYVYYKIDKRDQLFKDFKNESIISMYLT
                     NNIKNPDIIMWAVFQ"
     gene            complement(2540..2986)
                     /gene="tssJ"
                     /locus_tag="RTF91_001706"
     CDS             complement(2540..2986)
                     /gene="tssJ"
                     /locus_tag="RTF91_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system lipoprotein TssJ"
                     /protein_id="HDZ4944556.1"
                     /translation="MFCKKSLFFLLPLFFCACSSVVSVKIDNIENSNLNNRHDDVPVT
                     AIVYQLKDIKKFEEASDIDLATREDGVLGKDKLDSIKTQIAPKDNIIAVKVDEGEVPY
                     VGVLVLFANNTKKVTKIWAKTEDASGFGKSKYLKFEISKEGIKRIK"
BASE COUNT         1076 a          441 c          325 g         1164 t
ORIGIN      
        1 ttacataaaa gaagacataa aaaatgaaat ttttaacact ttttttgttg tgaatgatta
       61 tcttaaacta ttaaatgatt ttaatagttt aagtataagc ttatatagaa aatttaagtt
      121 tgtacagctt ttcaacttta atacaaaata tacaaaaaag caataataca tcttaaagaa
      181 ttttgataaa gataatatcc tttttatcta aatatgatta taaatgtgag attgaaataa
      241 atggtactta agaatatgat ttactagtta agcgcctaaa tatctaatat aggattattt
      301 tatttgcaca tactttatat tttattagtg aatcaccact gctaaaacag ttaggatttt
      361 tacttgctta agtttaaatt ttttatcaac atagatatat tattatccat tttaatgtta
      421 ttagtttcta aattaaaaat tgtatagctc aacactccca atataatcaa catcggcaca
      481 atgataataa tttttttaaa atataatctt ataaatttct gccaaatatt ttcttttaaa
      541 ccggttctat atgctttatt aaaagccaac tcttcttcta ccttataaac tggtcttaaa
      601 gacgcagcaa tattattaca aaaatggatt attttttcat ctctatcttt agcctcatta
      661 tactttcctt tatagccaag aattaaacaa gcataaacaa actccaaaaa atctttaaat
      721 ttaaaagggt tgttaatcca tgatgatgca atgtcataaa aattatttcc acctagagtt
      781 tcatcgaata atcttaccgt taaggtattg tgagcccaaa aattgataaa aagttcgttt
      841 ttcattaagc tttcatctat aaaaacacaa agacaatatt tgaatttgat aatttctttt
      901 tcatcatatt ctttacacat gcttaattta gcggttatat ctaagatttt attaatcaat
      961 gtttctctaa gttgattaat attacttgta tctatagaac ttatctttga aagcctgtaa
     1021 gaaagcaaaa gcaactccaa agaataatca ataattttat tgttttttaa accatcaaaa
     1081 tttgaatcaa gaagtaaact taatgccttt ttttcttcgt ttattatttc tctcattgga
     1141 atactgccca cattataata tcaggatttt ttatattatt ggtcaaatac atactaatga
     1201 tactttcatt tttaaaatct ttaaacagct gatctctttt atctatttta taataaacat
     1261 aaccatttaa gtaaggaata ctagatggaa cattaggtac ttgatctata tttaagcctt
     1321 caagttgagt cgcaactata tttttaattt tactttgtgt atgtatttta ctttgaattt
     1381 taaaattatt aagtagatat tctgtagtaa cctctgcacg aactgcaaaa taaatttcag
     1441 catcttctaa aattcctgaa ttatcaaaaa taaaatcata aaaaccattg ccattaatac
     1501 tagtcttagc tatgaaatat ttagggcttg tgattttaga aaataataat cttaaattat
     1561 tcatcatatt taaaaaagta ttataaagat tatcgtgctt ataaggaata aaatctagaa
     1621 aagattcttc gttgctaaaa gctgcaagtt ctccttgaaa ttctaaaaat ttttcatata
     1681 aaaattcagg gtgtatttta tctttttttg atagatggga aaatattaaa taccattttt
     1741 ttaaaagatt aagagataaa aaagtgctaa aatctaatgt attttttgtt tgatctattc
     1801 ctttaaaaat attagataga acttttttat gctggttaat tgaaaaaatg atttcttcta
     1861 aaaaagatct tatagtagat attttgctga tatttaagca agtaggtata aaatcgcttt
     1921 ccaattcgat ttttttatta atatcaatat ttttaatttt tgcaattggc aattcaagtt
     1981 catcaggagt tgaattgcct aaaataccga gttttaatct taaacttgca agaagtaaat
     2041 cttttttctc ttgcgtaaaa gtcaaatttt caagttcgta ttcatcttca attttatcca
     2101 ttgcattaga ttttgaatca tcataatttc ttaaagcaat actatttcta aggcatacat
     2161 attttgaatt tggaaaacta tttcttaaag acaaatcagc aatatcagta actcccatcg
     2221 gaatttttaa taccacaatc gaatcaatca aagattcata gttgatttca atgggctcgg
     2281 gtaataaatc ttgctcaggt gcattaaaaa tacttccatc ctgtgcaata cccgaaattt
     2341 tagaaagtgc aatttttcct tgcaataaca tttcttgaga aaattctaag tctattattc
     2401 catacaaatt actatatata tttatagtct taagatcaat atttctacta aaaaatcttt
     2461 cttgttgctc aaaatgggtt tgtccaatat taagtccatc aaaccaagca acctttaatt
     2521 tatttgccat atatcattcc tatttaattc ttttaatacc ttctttagat atttcaaatt
     2581 ttaaatattt gctctttcca aacccacttg catcttcggt ctttgcccat atttttgtta
     2641 ctttttttgt attatttgca aataaaacaa gaacacccac ataaggaact tctccttcat
     2701 ctactttaac tgcgataata ttatccttgg gtgcaatttg tgttttaata gaatcaagct
     2761 tatccttgcc taagacacca tcttctctag tagccaaatc tatatcactt gcttcttcaa
     2821 attttttaat atccttaagt tgatatacaa tagccgtaac aggaacatca tcatgtctat
     2881 tattgagatt ggaattttct atattatcga ttttaacact gacaacgctt gagcaagcac
     2941 aaaagaacaa cggcaataaa aaaaataagc tttttttaca aaacataaaa ctaatccttt
     3001 ctttat
//
LOCUS       DAPWAA010000111         2910 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.112, whole genome shotgun sequence.
ACCESSION   DAPWAA010000111 DAPWAA010000000
VERSION     DAPWAA010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2910)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2910)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2910
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.112"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..1607
                     /locus_tag="RTF91_001707"
     CDS             <1..1607
                     /locus_tag="RTF91_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944557.1"
                     /translation="LLQNKALKKIIIFEKELELIFLALNFIDFSKDLSSGRLIILHHD
                     DINVPKMDKVFRLIGDLFYRSYNLHIANDFYENYKEDILKINKLNIQIIKNHNLMHGN
                     DPTDALQGIEQFVYNLPQMITHPSYKELLSKRKGINDTAIIVSTGPSLTKQLPLLKKY
                     ANKATIFCADSSYPILAKHGIKPDYVCMLERDEIVAECFNNDFGEFDKDIIFLVASLV
                     HKKTINYLERNKRKYILIIKGQPFARCLGLDDYGYINAGMSVSHMAYELAENLGHKNI
                     ILIGQDLAYAEDGQTHSQGFIHANLHNGDYERDLNRFTATAYGGNGKVQSSEIWTLFR
                     QIFENFIAFSQSKTYNCTEGGARIEGTIEKPFKEICENLLACKKDKNFKKLKVLNTKE
                     QLNLGVKIYKAIKKNMNLALNFKKECKKVQKQIYNLTHGKNKLSLDQINQNIDKIKEK
                     LSNKKYLFLQEILGPTLHHEQSILTPLYLKDIKDESDKQNKLFAWIYAHESLMENIID
                     LLEAQDKKLKIAIFPLQDLLERKKML"
     gene            complement(1643..>2910)
                     /locus_tag="RTF91_001708"
     CDS             complement(1643..>2910)
                     /locus_tag="RTF91_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDZ4944558.1"
                     /translation="SSNQTIKATIGPTQSSKIGLTRFETGARITSSGEVQLTLKNYNG
                     IDDFKFQKVVISTSVGTGLGVLAEEINKSADQTGVRATFTVETKGMSAVRAGTTSDDF
                     TINGVKIGQIEYKDGDGNGALVAAINSVKDTTGVEASIDPNGQLLLSSREGRGIEITG
                     DIGRGAFINPDMKTNYGRLSLVKNDGKDILISGTGLNSIGFDTGQFISQASVSLRESK
                     GRFDANIADAMGFGSANKSLILGGFSSVSAYMSSSGSGFSSGSGFSVGSGKNYSTGFA
                     DTVVISAASQLSAVYNVSSGSGFSSGTGLSQFATMKATAFGVKDETAGVTTLKGAMAV
                     MDIVETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANF
                     SKYNILAQSGSYAMSQANAVQQNVLKLLQ"
BASE COUNT         1051 a          494 c          427 g          938 t
ORIGIN      
        1 ttttacttca aaataaagcg cttaaaaaaa taatcatctt tgaaaaagaa ttagagctta
       61 tctttttagc tttaaatttt atagacttta gtaaggattt aagctcggga agacttatta
      121 ttttacatca tgatgatatt aatgttccta agatggataa ggtttttcgc ttaataggag
      181 atttgtttta tcgttcttat aatctgcaca ttgccaatga tttttatgaa aattacaaag
      241 aagatatttt aaaaatcaac aaactcaata tacaaatcat caaaaatcat aatcttatgc
      301 atggcaatga tccaacagat gctcttcaag gcatagaaca atttgtttac aatcttcctc
      361 aaatgatcac tcatccaagt tataaagaat tgctttctaa aagaaaaggt ataaatgata
      421 cagccatcat tgtttcaaca ggacctagtt taaccaaaca acttccttta ttaaaaaaat
      481 atgccaataa agcaactatt ttttgtgcgg attcttctta tcctattttg gctaagcatg
      541 gtatcaagcc tgattatgtg tgtatgctag agcgtgatga aatagtagct gagtgtttta
      601 ataatgattt tggggaattt gataaggata tcatttttct agtagcttct ttagtgcata
      661 aaaaaaccat taattatcta gaacgcaaca aaagaaaata tatcctaatc ataaaaggcc
      721 aaccttttgc tagatgttta ggactagatg attatggata tattaacgcg ggcatgagtg
      781 tatctcatat ggcttatgaa ctggctgaaa atttaggaca caaaaatatc attctcatag
      841 ggcaggattt agcctatgca gaagatggac aaacacattc tcaaggtttt attcatgcta
      901 atttacacaa tggagattat gaaagagatt taaatagatt tacagctact gcttatggag
      961 gaaatggaaa agttcaaagt tctgaaattt ggacgctttt tagacaaatt tttgaaaatt
     1021 tcattgcttt tagccaaagc aaaacttata attgcaccga aggtggagca aggatagaag
     1081 gaactataga aaaacctttc aaagaaattt gtgaaaattt acttgcttgc aaaaaagata
     1141 aaaattttaa aaaattaaaa gttttaaata ccaaagagca actaaacctt ggggttaaaa
     1201 tctacaaagc tatcaaaaaa aatatgaatt tagctttaaa ttttaaaaaa gaatgtaaaa
     1261 aagtccaaaa acaaatttat aatcttactc atggaaaaaa caaattatcc cttgatcaaa
     1321 taaatcaaaa tatagacaaa atcaaagaaa aactttcaaa taaaaaatat ctctttttac
     1381 aagaaatttt aggtcctact ttacatcatg agcaaagtat attgacacct ttatatctta
     1441 aagatattaa agacgaatca gataaacaaa ataaactttt tgcttggatt tatgcacacg
     1501 aatctttgat ggaaaatatt atagatcttt tagaagctca agataaaaaa cttaaaatcg
     1561 ctatttttcc tctgcaagat cttttggaaa gaaaaaaaat gctttaaaaa taccttagat
     1621 gttatccatc taaggtaaaa atttactgca agagttttaa aacattttgt tgcacagcat
     1681 tagcttggct catagcataa gaacctgact gtgcaagtat gttatactta gaaaaatttg
     1741 cactttcagc agcaaagtct acatctctta tggttgattc ggctgctttg acatttactt
     1801 gagtaacagt aatattattt atagtaactt gaagttgatt ttgcactgaa cctatatcag
     1861 ctctaatttg atcaagattt gttgtagcag tttcaactat atccatcaca gccatagcac
     1921 ctttaagtgt agttacaccc gctgtttcgt ctttcactcc aaaagctgtt gctttcatag
     1981 ttgcaaattg tgataaacct gtaccactag aaaatcctga acctgaagaa acattataca
     2041 ctgcagaaag ttgagaagca gctgaaataa ctacagtatc tgcaaaacct gtagaataat
     2101 ttttaccact acctacagaa aatcctgaac ctgaagaaaa tccactgcct gaactactca
     2161 tataagctga aacagaagaa aatccaccta atataagtga tttgtttgca gaaccaaatc
     2221 ccatagcatc agcgatatta gcatcaaacc ttccttttga ttctcttaaa gaaacagaag
     2281 cttgagagat aaattgacct gtatcaaacc cgatagagtt aagacctgtg ccgcttatta
     2341 aaatatcttt accatcattt ttaaccaaag ataagcgacc atagtttgtt ttcatatccg
     2401 gattaataaa agcacctcta ccgatatctc ctgtgatttc aatccctcta ccttctcttg
     2461 aagagagcaa aagttgccca tttggatcaa ttgaagcttc aactcctgtt gtatctttaa
     2521 ctgagttaat tgcagcaact aaagctccat taccatcgcc atctttatac tctatctgac
     2581 caatcttaac tccattgata gtaaaatcat ctgaagtagt cccagctcta actgctgaca
     2641 tacctttagt ctctactgta aaagtagctc taactccggt ttgatctgca cttttattaa
     2701 tctcctcggc caaaactcca agtcctgttc caactgaagt tgaaatcaca actttttgga
     2761 atttaaaatc atctatacca ttgtaatttt taagagtaag ttgcacttca ccactagatg
     2821 taattcttgc tcctgtttca aaacgtgtta aacctatctt agaagattga gttggtccta
     2881 tagtagcttt tatagtttga tttgaactag
//
LOCUS       DAPWAA010000112         2851 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.113, whole genome shotgun sequence.
ACCESSION   DAPWAA010000112 DAPWAA010000000
VERSION     DAPWAA010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.113"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            948..2099
                     /locus_tag="RTF91_001709"
     CDS             948..2099
                     /locus_tag="RTF91_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDZ4944559.1"
                     /translation="MNLISEILDLQGEFEKIRHQIHENPELGFDELCTAKLVAQKLKE
                     FGYEVYEKIGKTGVVGVLKKGNSNKKIGLRADMDALPMQECTNLSYKSKKDNVMHACG
                     HDGHTTSLLLAAKYLASQEFNGILNLYFQPAEEGLGGAKAMIEDGLFEKFDSDYVFGW
                     HNMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGHGSAPEKAKDPIYTASLLVVALQS
                     IVSCNVDPQNSAVVSIGAFNAGHAFNIIPDNAIIKMSVRALDNETRKLIEEKIYKICK
                     GIAQANDIEIQISKNVVAPVTMNHDGAVDFASEVAKELFGEENCDFNHRPLMASEDFG
                     FFCEMKKCAYAFLENENDIYLHNSSYVFNDKLLARAASYYAKLALKYLK"
     gene            complement(2103..2843)
                     /gene="yaaA"
                     /locus_tag="RTF91_001710"
     CDS             complement(2103..2843)
                     /gene="yaaA"
                     /locus_tag="RTF91_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HDZ4944560.1"
                     /translation="MKILFSPSESKNENCKQNPINENSFIFKELFSYRMQALKHYEEF
                     IKNANLQNLQELFGIKNENEIDKFKQDLKTAPTEQAITLYSGVSYEYLNFKALDKKSQ
                     AYILENTLIFSNLFGVVRASDTLPFYKFKQGAKIGNFAIEKFYKEHFSKALDQYLENE
                     EILDLRAGFYDKFYTPKKKFYTYKFIKNGKVISHFAKAYRGILLSISAKNQARNNKEL
                     LENLPLNLKLKEIQIKNLKEEIMLEILD"
BASE COUNT          937 a          322 c          489 g         1103 t
ORIGIN      
        1 ttaataaata tttaaaaagg attttaatat gtaaaaatga cttttatttc ttttagacgc
       61 aattagggtt tgagtttatc atttatagca tttcatgggc agcgacaggt tttaatgcct
      121 ttgatttcaa gtaaccttgt tttaaatact taacaagcca tcttaatcac tagtatgata
      181 gtggttgcaa aaatttttgg tgcttcgttt acggcttttt tagtttataa atttgggtta
      241 aaaaaggttt aatgaattct gatatatttt aacttcgggg acggttatag cagtatttta
      301 attataagat ttttagaagg ctgttttatt agttttttat aggcaagggt gaaaacaaaa
      361 aagaataatg tgaaaaactt atttatgctc taaaatctca tgtcgcttga ggtatgatta
      421 tttttgatag gacctatttt atttttcagt ctatttttac caacttttta tgggtaatac
      481 gcaggtttta gtgaagaatt agctgatttt gttaaaaaag aaattcaaac tttgcctaat
      541 tttgttatta ttttcagtcc ttatcttaga ttatttttta aaagaaaaaa tatctctttt
      601 ataataatgc tattgttgaa gggcgtgtat ttttatatgg attttaaaaa tttagtattg
      661 atacagattt ttgccgtatt gtcgggtatt tttattctat gtggtttgca tttttcttta
      721 atttactttc agaattaaaa aatttcaatc caaatttata agtacttttt ggagtattac
      781 ctttgttata ctatcattta atttataggt cgtatcttgg agtgttgata aaactcatag
      841 ttttatttta gattttgttt atatttttgc tttgattttt atttcaacaa tcttggcgta
      901 atttgttcta cctagaaaag aaaattttat acaaggagaa aaataaaatg aatttaattt
      961 cagaaatact agatttacaa ggtgaatttg aaaaaattcg tcatcaaatt catgaaaatc
     1021 ctgagcttgg ttttgatgag ttgtgtactg caaaattggt ggcgcaaaaa ttaaaagaat
     1081 ttggttatga agtttatgag aaaattggaa aaacaggcgt tgtgggggtt ttaaaaaagg
     1141 gaaatagtaa taaaaaaata ggacttcgtg cagatatgga tgctttacct atgcaagaat
     1201 gcacgaattt gtcatacaaa agcaaaaaag acaatgtaat gcatgcttgc ggccatgatg
     1261 gacatactac ctctttgttg cttgctgcaa aatatttagc aagtcaggaa tttaatggta
     1321 tattaaatct ttatttccaa cctgccgaag aaggtttagg tggcgctaaa gcaatgatag
     1381 aagatggatt atttgaaaaa ttcgatagtg attatgtttt tggatggcat aatatgcctt
     1441 ttggcagcga taagaaattt tatcttaaaa aaggtgccat gatggcttct tcagatagtt
     1501 atagtattga agttatcgga agaggtggtc atggaagtgc tccagaaaaa gcaaaagatc
     1561 ctatatatac tgcttctttg cttgtggtgg ctttgcaaag catagtatct tgcaatgttg
     1621 atcctcaaaa ttcagcagtt gtaagtatag gtgcttttaa tgcaggacat gcttttaata
     1681 ttattccaga taatgcgata attaagatga gtgttagggc attggataat gaaactagaa
     1741 aattaattga agaaaaaatt tataaaattt gcaaaggtat tgcacaggct aatgatatag
     1801 aaattcaaat tagcaaaaat gttgttgcac cagtcactat gaatcatgat ggagcagtag
     1861 attttgcaag tgaagttgca aaagagctat ttggtgaaga aaattgtgat tttaatcatc
     1921 gtcctttaat ggcaagtgag gattttggct ttttttgtga aatgaaaaaa tgtgcttatg
     1981 cttttttaga aaatgaaaac gacatttatt tacataattc tagttatgtt tttaatgata
     2041 agcttttagc tagagctgca agttattatg cgaaattagc tttaaaatat ttgaaataaa
     2101 aattaatcta gaatttcaag cataatttct tcctttaagt ttttgatttg aatttctttg
     2161 agttttaggt ttaaaggaag attttctaaa agttctttat tatttcgagc ttgatttttt
     2221 gcacttatgg aaagtaaaat tcccctataa gctttagcaa aatgactgat aactttacca
     2281 ttttttataa atttataagt ataaaatttc ttttttgggg tataaaattt atcataaaat
     2341 cccgctctaa gatcaagtat ttcttcattt tctaagtact gatctaaggc tttgctaaaa
     2401 tgttctttgt aaaatttttc tatagcaaaa tttcctattt tggctccttg tttgaattta
     2461 taaaagggta gggtatcact agctcttaca acgccaaaaa gattagaaaa aataagagtg
     2521 ttttctaaaa tataagcttg acttttttta tctaaggctt taaaattaag atattcataa
     2581 cttactccgc tataaagcgt gatagcttgc tcggtgggag cagtttttaa atcttgttta
     2641 aatttgtcga tctcattttc atttttgata ccaaaaagct cttgtaaatt ttgcaaattt
     2701 gcatttttaa taaattcttc atagtgtttt aaggcctgca ttctataaga aaataattct
     2761 ttaaatataa atgaattttc attgatgggg ttttgtttgc aattttcatt tttgctttca
     2821 ctaggagaga ataaaatttt cattttaacc t
//
LOCUS       DAPWAA010000113         2770 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.114, whole genome shotgun sequence.
ACCESSION   DAPWAA010000113 DAPWAA010000000
VERSION     DAPWAA010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2770)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2770)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2770
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.114"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..1118
                     /locus_tag="RTF91_001711"
     CDS             <1..1118
                     /locus_tag="RTF91_001711"
                     /inference="COORDINATES: protein motif:HMM:NF027978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944561.1"
                     /translation="MKKGIFILIGIAVLFSACGNPIDEKTVKKYENQLNQTIKQEISS
                     LSQDSGIKIEFSDFKCNADGKFIACLSPNFKTLVEDNNDEYQELFQAKNIKFRSNEIY
                     KGETNASIGIKEYYNNLFKDQKNIQTSLVFENFQLGERIVNDINESLLQQDPKISSFI
                     NKLSSDSYTLSFDNSINKQKSDYLDNLDIKFYNARLNFNTNLNINLKEDLINYLDSKG
                     IKFNTQTLTMDGKAINEFLIKSYKQTSDFSSTIQKYIILNNFKIDSTLKTEGVFNSYM
                     TTAKENLQILKAQSQNEKEALILDKALIILNNITQNDDYKLNLDLKFKNIPISDYNTQ
                     GINSIEKLNINNQDATEVLRIILPFIMLSMLMGGASF"
     gene            complement(1144..1464)
                     /locus_tag="RTF91_001712"
     CDS             complement(1144..1464)
                     /locus_tag="RTF91_001712"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944562.1"
                     /translation="MGELGRDAHAEYGHSFLSVNVANIPIVATTFNVKNDDFISYLKQ
                     SNLPTHYELAKLLAKEMGYDIHNSLEEPNVFYINGVDISGNDGYIKVLRDEGRAKFEY
                     FDKE"
     gene            complement(1481..1897)
                     /locus_tag="RTF91_001713"
     CDS             complement(1481..1897)
                     /locus_tag="RTF91_001713"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944563.1"
                     /translation="MNENTHLVLAKKAGFKTFYYSAQTISELRDIGPENLDEFFTREN
                     YYFKYKQLGDLVVLEKLKENQDKFLYGKNFVILHQRNAHSPYQRGYRAYEKADVFKPM
                     TRENTYDNAMIFNDYFISSVFEVFKELSQKMAFLSM"
     gene            complement(1920..2315)
                     /locus_tag="RTF91_001714"
     CDS             complement(1920..2315)
                     /locus_tag="RTF91_001714"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944564.1"
                     /translation="MAIFALGVLPYKTVYKTDSLANFSSKNDSISLYNSLQTFSAYFF
                     LYLRIPQTTLPDYPEYTYDYKNVVDRNVILILGESTNANCIGLLGYERNTSPLLSKWA
                     KNDKNFVVKSNLKCCFDSCGFTKLTKYCL"
     gene            complement(2412..2714)
                     /locus_tag="RTF91_001715"
     CDS             complement(2412..2714)
                     /locus_tag="RTF91_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944565.1"
                     /translation="MVVITFIAFILPGFLFSLYNDYIFRFDLNNVLVLDAAALIFPLV
                     RPRIFIVCVFGFFALMECIQFSHLYYFNKLLNAFSLHLMFVEFGKVVKIALGRDIT"
BASE COUNT         1120 a          425 c          327 g          898 t
ORIGIN      
        1 atatgaaaaa aggtattttt atccttatcg ggatagctgt tttattttca gcttgcggaa
       61 atcccataga tgaaaaaaca gttaaaaaat acgaaaatca actaaatcaa acaattaaac
      121 aagaaatttc aagcctttct caggattctg gaataaaaat tgaattttct gattttaaat
      181 gcaatgcaga tggtaaattt atagcatgtt taagtccaaa tttcaagact cttgtagaag
      241 ataacaatga cgaatatcaa gaactatttc aagcaaaaaa tatcaaattt cgctcaaatg
      301 aaatttataa aggcgaaaca aatgcatcaa ttggtattaa agaatattat aacaatcttt
      361 ttaaagacca aaaaaacata caaacaagct tagtttttga aaatttccaa cttggcgaaa
      421 ggattgttaa tgatatcaat gaaagcttgc ttcaacaaga tccaaaaata agctctttta
      481 tcaataaatt aagttcagat tcttatactt tatcatttga taattccatc aacaaacaaa
      541 agagtgatta tctagataat cttgatataa aattttataa tgcaagatta aatttcaata
      601 caaatctaaa tataaatcta aaagaagatc tgattaatta tcttgattct aaaggtataa
      661 aatttaacac tcaaacttta accatggatg ggaaagctat taatgaattt cttattaaaa
      721 gctataagca aacttcggat tttagcagta caatccaaaa atacattatc ttaaacaatt
      781 ttaaaattga ttcaactctt aaaaccgaag gtgtgtttaa tagctacatg acaacagcta
      841 aagaaaattt acaaatccta aaagctcaga gtcaaaatga aaaagaagcg ttaattcttg
      901 ataaagcttt gattatttta aataacatca ctcaaaacga tgattataaa ctcaatcttg
      961 atttaaaatt taaaaatatc cctattagtg attacaatac acaaggaatc aatagcatag
     1021 aaaaactaaa tatcaacaat caagatgcca cagaagtttt aagaattata cttccattta
     1081 tcatgctttc tatgttaatg ggcggagcat cattttaatc tttaagagga attcctctta
     1141 aagttattct ttatcaaaat attcaaattt tgccctacct tcatctctta aaactttaat
     1201 ataaccatca tttccagaaa tatcaacacc attaatgtaa aacacattag gttcttctaa
     1261 agaattatga atatcatacc ccatttcctt ggctaataat ttagcaagct cataatgagt
     1321 tggcaaattg ctttgtttta aataagatat aaaatcatca tttttcacat taaaagtagt
     1381 agcaacaata ggaatattag ctacatttac acttaaaaaa gaatgtccat attcagcatg
     1441 cgcatctctt cctaattctc ccatagctca ggtgtgaaaa ttacatagat aggaatgcca
     1501 ttttttggct taattcttta aaaacttcaa atacactaga aataaaataa tcattaaaaa
     1561 tcatagcatt atcataagta ttttcacgag tcattggttt aaaaacatct gctttttcat
     1621 acgctctata gcctctttga taaggagaat gtgcgtttct ttgatgcaat ataacaaaat
     1681 tttttccata taaaaattta tcttgatttt cttttaattt ttccaaaacc accaaatcac
     1741 ccaattgctt atatttaaaa taataatttt cccttgtaaa aaattcatct aaattttcag
     1801 gacctatatc tcttaactca ctaatggttt gcgcactgta gtaaaaagtt ttaaatcctg
     1861 ctttcttggc taacacaaga tgtgtgtttt cattcaaaat atgcctaata ttatccggct
     1921 tataagcaat atttagtaag cttggtaaag ccacacgagt caaaacagca cttgagattg
     1981 ctttttacta caaagttttt atcatttttt gcccatttac taagtaatgg acttgtattt
     2041 ctttcatagc ctaaaagccc tatacaattt gcattagtac tttcgcctaa aatcaagata
     2101 acattacgat ctactacatt tttataatca taagtgtatt caggataatc cggtaaggta
     2161 gtttgaggta tgcgtaaata taagaaaaaa taagcgctaa aagtttgtaa agaattatac
     2221 aaagaaatac tatcattttt agaagaaaaa ttggcaagac tatcagtttt ataaaccgtc
     2281 ttataaggta aaacacctaa agcaaaaatc gccaaaattg tagcgatgaa attggttttt
     2341 ttgagatttt aaaataaaag atacttaaag cagtatagtt aagaaatatt acgcttatat
     2401 ggattaagcc tttaagtaat atccctccct aaagcaattt ttactacttt tccaaattca
     2461 acaaacatta aatgtaaaga aaaggcattc aaaagtttgt taaaataata taaatgcgaa
     2521 aattggatac attccatcaa agcaaaaaat ccaaacacac aaactataaa aattctagga
     2581 cgaaccaaag gaaaaatcaa agctgccgca tctaaaacca aaacattatt taaatcaaaa
     2641 cgaaatatat agtcattata aagtgaaaac aaaaatccag gcaaaataaa agctataaaa
     2701 gttataacta ccaaaaaaag taatttctaa aaaagatttt cacaatattc ctttatttaa
     2761 aaagtttaaa
//
LOCUS       DAPWAA010000114         2689 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.115, whole genome shotgun sequence.
ACCESSION   DAPWAA010000114 DAPWAA010000000
VERSION     DAPWAA010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2689
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.115"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            263..2071
                     /gene="typA"
                     /locus_tag="RTF91_001716"
     CDS             263..2071
                     /gene="typA"
                     /locus_tag="RTF91_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDZ4944566.1"
                     /translation="MENIRNIAVIAHVDHGKTTMVDELLKQSGTFNEREQISERVMDS
                     NDIEKERGITILSKNTAINYKGTKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQE
                     GVMPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALDANDEQLDFA
                     IVYAAAKNGYAKLDLNDESDNMEPLFKTILERVPAPSGTNDNPLQLQVFTLGYDNFVG
                     KIGIARIFNGVVKKNQSVMLAKADGTKINGRISKLIGFMGLEKMDIEEAGSGDIVAIA
                     GFEALDVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGTEGKHVTSNKISERL
                     EAEMKTNIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDG
                     IKTEPFEHLVIDVPEEFSGAVIEKLGKRKAEMKTMAPTGDGQTRLEFEIPARGLIGFR
                     SQFLTDTKGEGVMNHSFLEFRPFSGAVEKRNNGALISMENGVALGYSLFNLQERGVLF
                     IEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKLSLERAL
                     EWIEEDELVEVTPVNVRVRKRYLDPTQRKRMEKAKS"
     gene            2071..>2689
                     /locus_tag="RTF91_001717"
     CDS             2071..>2689
                     /locus_tag="RTF91_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(A) polymerase"
                     /protein_id="HDZ4944567.1"
                     /translation="MDLKSLENNRLYILKRLGILKLLSIIEALLVGFLAFVFIKDALI
                     AVILAVFVGIFFFRFTAKKLKLVQKELEINALNLFLRRFGMKFKKESLSQKDFLKLEL
                     TKDLKEFKSQNCFEFKDFKIYDIQFLDQDKRFFCGILLEILKPNKNPSFEDEEQIYIK
                     LENKNFTLNHIFSKKNHYLIATLSNPFFIDIKKDLESNFKNLEKNL"
BASE COUNT          967 a          379 c          497 g          846 t
ORIGIN      
        1 attttttcat ttttattcga cttaaaagtc tctaaaagtt ctaaaacttg aagcaaaact
       61 tcatcttttc tttcaactaa attgctttta aactcaacaa aaatctcttc atttaatggt
      121 tttgacattt taatttcctt tttaaaaatt taatttcata aagctttaaa gcaagaagtg
      181 ttccaagttt tgatactttg taatttaagc taaacttttg tataatttaa gcttttaaaa
      241 aattagcttt ggagaagata ttttggaaaa tattagaaat atagcagtta tagctcacgt
      301 tgatcatggt aaaactacta tggtagatga attattaaaa cagtcaggca cttttaatga
      361 aagagaacaa atctcagaac gcgttatgga tagtaatgat atagaaaaag aacgcggcat
      421 taccatactt tcaaaaaata cagcgatcaa ttacaaaggt acaaaaatca acatcataga
      481 cactccaggg catgctgatt ttggtggaga agtagaacgc gttttgaaaa tgatagatgg
      541 agttctgctt ttagtggatg cccaagaagg cgttatgcca caaactaaat ttgtggttaa
      601 aaaagctttg tctttagggc ttaaacctat agttgtaatt aacaaaattg acaaaccagc
      661 tgctgatcct gaaagagtaa tcaatgaaat ttttgatctt tttgtggctt tagatgcaaa
      721 cgatgagcaa cttgactttg ccatagttta tgccgcggca aaaaatggtt atgctaagct
      781 tgatctaaac gatgaaagtg acaatatgga gccacttttt aaaaccatac ttgaacgcgt
      841 tccagcacca agtggcacta atgacaatcc tttacaactt caagttttta ccttaggata
      901 tgataatttc gtaggtaaaa taggtattgc tagaattttt aatggcgtcg taaagaaaaa
      961 tcaaagcgtc atgcttgcaa aagctgatgg cactaaaata aatggtagaa tttcaaaact
     1021 cattggcttt atgggtttag aaaaaatgga tattgaagaa gcaggaagtg gagatattgt
     1081 agccatagca ggttttgaag ctttagatgt gggtgatagt gttgtagatc caaacaatcc
     1141 tatgccgctt gatcctttac acattgaaga gccaacttta agcatagtat tttctgtaaa
     1201 tgatggccca ttagcaggaa ctgaaggaaa gcatgtaact tcaaataaaa tctctgaacg
     1261 cttagaagct gaaatgaaaa ccaatatcgc catgaaatac gaaagcacag gcgaaggtaa
     1321 atttaaagta agcggcaggg gtgaacttca aatcactatt ttagccgaaa atatgcgtcg
     1381 tgaaggtttt gagttttgta tgggaagacc tgaagttatc gtaaaggttg aagatgggat
     1441 taaaacagaa ccatttgaac atttagttat cgatgtacct gaagaattta gtggtgcggt
     1501 tatagaaaaa cttggaaaaa gaaaagctga aatgaaaacc atggcaccaa caggagatgg
     1561 acaaacaaga cttgagtttg aaatcccagc gcgcggactt ataggcttta gaagtcaatt
     1621 tttaaccgat actaaaggtg aaggtgtgat gaatcatagc tttttagaat tccgtccttt
     1681 tagtggtgcg gttgaaaagc gtaataatgg tgcattaatt tctatggaaa atggagtagc
     1741 tttggggtat tctttgttta accttcaaga gcgtggcgtg cttttcatag aaccccaaac
     1801 taaagtttat accggtatga ttataggtga gcattctcgt cctaatgatt tagatgttaa
     1861 tcctatcaaa ggaaaaaatc ttaccaatgt aagagcaagt ggaagcgatg atgcgatcaa
     1921 acttgtacca cctagaaaat tgagccttga aagagcttta gagtggatag aagaagatga
     1981 acttgtggaa gttacgcctg taaatgtgcg tgttcgtaaa cgctatcttg atccaaccca
     2041 aagaaaaaga atggaaaaag caaaatctta atggatttaa aaagcttaga aaataatagg
     2101 ctttatatac ttaaacgctt gggaatttta aaactcctaa gcattatcga agccttgctt
     2161 gtaggctttt tagcctttgt ttttataaaa gatgctttaa ttgcagtgat tctagctgtt
     2221 tttgtaggca tttttttctt tcgttttacg gccaaaaaac taaaactcgt acaaaaagaa
     2281 ctagaaatca atgctttaaa tttatttttg cgtcgttttg ggatgaaatt taaaaaagaa
     2341 agcttaagtc aaaaagactt tttaaaactt gaacttacaa aagatttaaa agaatttaaa
     2401 agtcaaaact gctttgaatt taaagatttt aaaatttatg atattcagtt tttagatcaa
     2461 gacaaacgct ttttttgcgg aattttactt gaaattttaa aaccaaacaa aaatcctagt
     2521 tttgaagatg aagagcaaat ttatatcaag cttgagaata aaaatttcac tttaaatcat
     2581 atcttttcta aaaaaaatca ttatctcatt gctactttaa gtaatccttt ttttatagat
     2641 ataaaaaaag atttggaaag taattttaaa aatttagaaa aaaatctta
//
LOCUS       DAPWAA010000115         2614 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.116, whole genome shotgun sequence.
ACCESSION   DAPWAA010000115 DAPWAA010000000
VERSION     DAPWAA010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.116"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..733)
                     /locus_tag="RTF91_001718"
     CDS             complement(<1..733)
                     /locus_tag="RTF91_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDZ4944568.1"
                     /translation="MSILKIENLQKYYGLHHALKDINLEVKAKEVVVILGSSGCGKST
                     LLRCINGLEEIASGNIYIDNEKIDKDFKEWPRMRQKVGMVFQSYELFEHLSVEENILL
                     GPMKVQKRKKDEVLKEAKIWLEKVELLHKIHAYPKELSGGQKQRIAIVRSLCMNPKLM
                     LFDEVTAALDPEIVREVLKVILNLAKEGMTMLIVTHEMGFAKAVADKIIFMDEGKIIE
                     ENHPQSFFKNPKSERAKKFLNLFDYH"
     gene            complement(735..1391)
                     /locus_tag="RTF91_001719"
     CDS             complement(735..1391)
                     /locus_tag="RTF91_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDZ4944569.1"
                     /translation="MLELLNTDTLLRLWQGLFITLEISFISIVITSIGGLFLGILMSF
                     KNVYIYTFCRLGLEFVRVMPLLVWLFVVYFGFPRWFGWDLGSVSAAIIVFSIWGCFEM
                     MDLVRISLQSIPKHQYESASSLGLNTVQSFVYVIIPQAVRRLTPMSMNLLTRMIKSTT
                     FAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFTLCYPITLYSRKLEKKWS
                     "
     gene            complement(1384..2085)
                     /locus_tag="RTF91_001720"
     CDS             complement(1384..2085)
                     /locus_tag="RTF91_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDZ4944570.1"
                     /translation="MDFDFILAQAPVFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYF
                     KIKILENICKLYIEFSRNTPLLIQLFFLYYVLPKFNIHLEQIPPLNVICLSVEETLRP
                     SFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAI
                     SMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILP
                     LSFILLKFEKRLLHA"
     gene            complement(2102..>2614)
                     /gene="nssR"
                     /locus_tag="RTF91_001721"
     CDS             complement(2102..>2614)
                     /gene="nssR"
                     /locus_tag="RTF91_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrosative stress-sensitive transcriptional
                     regulator NssR"
                     /protein_id="HDZ4944571.1"
                     /translation="EAKKFFILLKGKIRIYKSTASDKEITLHYFNPLNFIAEMPAFKK
                     LNYPANAIFEEDGEILEIDFVNFQNLCSENKEFNFLLISSLFDKIKILEKKLSQNTLD
                     LRTRLLKYLLENEKNLDTISQKQIVIDLNVRAQSLSRVLKELKISELIDTKKGRIEIL
                     NKDMIMKELW"
BASE COUNT          991 a          468 c          286 g          869 t
ORIGIN      
        1 tgtgataatc gaataaattt aaaaattttt ttgctctttc actttttggg tttttaaaaa
       61 aactttgagg gtgattttct tcaataattt taccctcgtc cataaaaata attttatccg
      121 ccacagcctt agcaaaaccc atttcatgag taacaataag catagtcata ccctctttag
      181 caagatttaa tataactttt aaaacttctc tgacaatctc aggatcaagt gcagctgtaa
      241 cttcatcaaa aagcatcaac ttaggattca tgcacaagct tcttactata gcaattcttt
      301 gcttttgtcc tccgctaagt tcttttggat aagcatgaat tttatgtaaa agttctactt
      361 tttcaagcca aattttagct tcttttaaaa cctcatcttt ttttcttttt tgcaccttca
      421 taggtcctaa aagtatattt tcttcaacac ttaaatgctc aaaaagttcg taagattgaa
      481 aaaccatgcc gactttttga cgcattcttg gccattcttt gaaatcttta tctatttttt
      541 cattatcaat ataaatatta ccacttgcaa tctcttcaag cccattaata caacgcaaaa
      601 gtgtggattt tccacatccg ctagaaccta aaatcaccac aacttcttta gctttaactt
      661 ctaaattaat atcttttaaa gcatgatgta aaccataata tttttgtaaa ttttctattt
      721 ttaatatact cattttagct ccattttttc tctaattttc ttgaatacaa agtgatagga
      781 taacaaagtg tgaaaaagat aaaaaaaatc aaaccataaa taataaaagg tgcaaaatca
      841 tttctattat gaaattctat aatttgttgc cctactttta caagttctac tgcgccgatt
      901 aaataagcaa aagtagtgct tttaatcata cgcgtaagca aattcatact cataggagtt
      961 aaacgacgca ccgcttgggg aataataaca taaacaaaac tttgtaccgt atttaaaccc
     1021 aaagatgatg cactttcata ctgatgtttt ggaatgcttt gcaaagaaat acgcaccaaa
     1081 tccatcatct caaaacaacc ccaaatgcta aaaacaataa tagctgcact cacagaaccc
     1141 aaatcccacc caaaccatct aggaaaacca aaatacacca caaaaagcca tactaaaagc
     1201 ggcataacac gtacaaattc caaacctaaa cgacaaaaag tatagatata gacattttta
     1261 aaactcatta aaattcccaa aaataaccca cctatcgaag taatgacgat gctaataaat
     1321 gaaatttcaa gagtgataaa aagtccttgc caaagtctta aaagcgtatc tgtatttaaa
     1381 agttcaagca tgaagcaacc ttttttcaaa ctttaacaaa ataaaagaca aaggcaagat
     1441 aatacacaaa tatcccataa atagcaaaaa taataattca tctgttttat aggttaagga
     1501 atttaaactc ttcattaaat taaccaaatc cggtaaagca ataatactaa cgactgaagt
     1561 ttctttgatt aaaaatataa tattagcact aatacttggc atagaaatag ccaaagcttg
     1621 cggcaaaatc acataacgca aatttccaaa ttttgaaaaa cccaaagaaa gtcccgcttc
     1681 aaactgctgt tttcttatag cttcaaatcc cgcccttaaa ctttcagcca tataagaacc
     1741 ccctaaaaaa ctaagcccta ctatagcaca agcaaaagaa ggtcttaaag tttcttctac
     1801 gcttaaacaa atcacattaa gcggtggaat ttgctctaaa tgtatattaa atttaggtaa
     1861 aacataatat aagaaaaaaa gttgaattaa taaaggcgta tttcttgaaa actctatata
     1921 aagcttgcaa atattttcta aaatttttat tttaaaataa ctcattaaaa tacaaaataa
     1981 gcctataatc aaagaaaaaa taattccaaa aaagcttagt tttatcgtaa gccaagcagc
     2041 cgttaaaaaa acaggagctt gagctaatat aaaatcaaaa tccattccct accttaaatt
     2101 tttaccaaag ttctttcata atcatatctt tatttaaaat ttcaattcta cctttttttg
     2161 tatcaataag ttctgaaatt ttaagttctt ttaacactcg agataaagat tgtgctctaa
     2221 catttaaatc aattacaatt tgtttttgtg aaattgtatc taaatttttt tcattttcca
     2281 aaagatactt taacaatctc gtccttaaat ctaatgtgtt ttgagataat ttcttttcta
     2341 aaattttgat tttatcaaaa agtgaactga taagtaaaaa attgaattct ttattttcac
     2401 tgcataaatt ttgaaaatta acaaaatcaa tttccagaat ttccccatct tcttcaaaaa
     2461 tagcattagc aggataattt aattttttaa aagcaggcat ttctgctata aaatttagag
     2521 gattaaaata atgcaaagta atttctttat cacttgctgt acttttataa atacgtattt
     2581 ttcccttgag taaaataaaa aattttttag cctc
//
LOCUS       DAPWAA010000116         2591 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.117, whole genome shotgun sequence.
ACCESSION   DAPWAA010000116 DAPWAA010000000
VERSION     DAPWAA010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.117"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..283
                     /locus_tag="RTF91_001722"
     CDS             <1..283
                     /locus_tag="RTF91_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944572.1"
                     /translation="IFIKKKQNLPKIIHFKVAKDDLRLNIKEKIHFFAMFFTLFKLMA
                     YVVLVAGFLFLHRQDKLDIFAYICGISSLLVCVFVFILYIKKYESKKNY"
     gene            261..1448
                     /locus_tag="RTF91_001723"
     CDS             261..1448
                     /locus_tag="RTF91_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ4944573.1"
                     /translation="MSPKKIIKSMTALFAGMAFLFAGNALMVSSIGVILKEEGESSLA
                     VGVISSCFFIGALVGTISAHKVISRIGHIRSFSLFGAIFGISAMLHTVSENLIFWAIL
                     RFFIGICYYGLLMIIESWLNEKSKNAVRSRILGFYETVFYLAFGVGVLIIALNLSKHS
                     VFILSATLILLSSLPLNLIKIKEPILPTSSPISIPKIFDIAPLAIVTSFTAGMLINGF
                     FSMASLFILLQGFDVKAVSYFMFCGVLGGFFAQTIIGTISDKFGRKFAIITCASIGFI
                     TMLMFVFFKLHLYMQYLLGISLGIGIFCLYVLALARANDVLVSKNKGVELGRGVLFCY
                     SLGSLFGPLILGFLMEYFKIKGFIWFYIISLAFLILFAINKPNVLNKKFKKKPGNMVI
                     FDD"
     gene            1441..2526
                     /locus_tag="RTF91_001724"
                     /pseudo
     CDS             1441..2526
                     /locus_tag="RTF91_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344256.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
BASE COUNT          949 a          342 c          387 g          913 t
ORIGIN      
        1 gatttttatt aaaaaaaaac aaaatttacc aaaaattatt cattttaaag ttgcaaaaga
       61 cgatttaaga ctaaatatta aagagaaaat ccactttttt gccatgtttt ttactctttt
      121 taaactgatg gcttatgtgg tattagttgc tggattttta tttttacatc gccaagataa
      181 attagatatc tttgcttata tttgtggaat ttcatccttg ctagtttgtg tgtttgtttt
      241 tattttatat ataaaaaagt atgagtccaa aaaaaattat taaatcaatg acagcgcttt
      301 ttgctggtat ggcgttttta tttgcaggca atgccttgat ggtaagctct ataggtgtta
      361 tactcaaaga agaaggggaa agctctttag ccgttggagt aataagctct tgttttttca
      421 taggtgctct tgttggaact atcagtgctc ataaagtcat ttctcgtata ggtcatatac
      481 gctcttttag tttatttggg gctatctttg gaatttcagc tatgcttcat acggtaagtg
      541 aaaatcttat tttctgggct attttaagat ttttcatagg aatttgttat tatggacttt
      601 taatgattat agaatcatgg cttaatgaaa agagtaaaaa tgccgttcga tctagaattt
      661 taggttttta tgaaactgtt ttttatcttg catttggcgt tggagtttta attatagcat
      721 taaatttaag caagcatagc gtatttatct taagtgcaac tttgattttg ctttcatctt
      781 tacctttaaa tttaattaaa attaaagaac ctattttacc cacatcaagt cctatttcta
      841 tacctaaaat ttttgatata gcccctttgg ctatcgttac aagttttacg gctggaatgc
      901 ttataaatgg ctttttttct atggcgtctt tatttatact tttgcaaggt tttgatgtaa
      961 aagcggtgtc ttattttatg ttttgtggag ttttaggcgg tttttttgca caaaccatca
     1021 taggaactat ttcagataaa tttggtcgca aatttgccat catcacttgt gcaagcatag
     1081 ggtttatcac tatgcttatg tttgtctttt ttaaacttca cttatatatg caatatcttt
     1141 taggaattag ccttggcata gggatatttt gtttgtatgt tttagcgctt gctagagcaa
     1201 atgatgtttt agtgagcaaa aataaaggtg tagagttagg ccgtggagtt cttttttgtt
     1261 attctttagg ctctttgttt ggtcctttaa ttttaggttt tttaatggaa tattttaaaa
     1321 tcaaaggttt tatatggttt tatataattt ctttagcatt tttaatcctt tttgctatca
     1381 ataagccaaa tgttttaaat aaaaaattta agaaaaaacc tggaaatatg gtaatatttg
     1441 atgattaata ctcaactagc aagtcaaatt gccaatacgc aaaaaaatga tttaaaacta
     1501 gataattccg catcaaaaga taaaacaaat ttaaaagata atcctaaaga agcacttgca
     1561 caagctttaa aacaaaattt aggcttaggt aaagatgcta gcagtgaaga aatattagca
     1621 aaatttgttc aaaatgaaac aggtactaag ttaaaagaac ttgttaataa actcttagat
     1681 caaatcaatg cacagaaaaa tcccgattct cctgtgctta aacaaggaaa aaatttaaat
     1741 ttagctccta attttgccaa tgaattaaaa actttaagca cagagcttgc aaaaagtgat
     1801 acttttacac aagttttaaa tagattaaat caaattttaa aacctgctag cgagataaaa
     1861 aacaacaatc tagccccttt atttaaaaat tcgggcgtat ttttagaagc caaattaaaa
     1921 gatgctttaa atgaggaatt attacctaaa agttttcatt ctcttttaag cacaatcaaa
     1981 ggtcttagca gtgaaaaact aagtattcaa atagcccaac ttgcaaatgc aaatttaagt
     2041 ccaaaggata ctctaaaaga attaaaaaat attattaatt ctagtaaaaa tgaaaataaa
     2101 caaattctaa atcaaagctc ttttaaaggg cttttaaatt taagctctaa attggaaaat
     2161 tttaaaaatt atataagtaa aaatcctagt catgctcaag aaaaaatcgt ccccatagct
     2221 aataaaattt taaaagaatt aaattctata aaaaatgatt tttttaaagc tcttaataag
     2281 ccagaaaatt taatgataaa agatccaaat atccttaaac aaactgccac tgcttttgaa
     2341 aaacttgaac atactttaaa aaatatacta ggcgatcaag cctctaaaat acaagataaa
     2401 gaaagtattt tagaaaatct tttaaatagt aaagaaaata ttaaagaaga aaaacatgca
     2461 aaaacacaaa aagaagaaga tactaaagct gatatcaaac aagatactca aaacgaagaa
     2521 aacttgccta aagaagaagt tattgcaaaa gaagatgaaa atataaaaac tcacgaagaa
     2581 gatattcaag a
//
LOCUS       DAPWAA010000117         2589 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.118, whole genome shotgun sequence.
ACCESSION   DAPWAA010000117 DAPWAA010000000
VERSION     DAPWAA010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2589
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.118"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            319..1383
                     /locus_tag="RTF91_001725"
     CDS             319..1383
                     /locus_tag="RTF91_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDZ4944574.1"
                     /translation="MKYPLDCEENFEKSFLFWLVKYVKFKLNSLSNKELKNPQALAEV
                     NFTLTKGVKNIEELDALVKKARNAGLSGVNTYFNPLKKVFEYLNFYKLYSLKQIDEEL
                     IVEVLASITGALSDASKKNYRIAVINFFDFLDKQNEEDEKAHIFDINLKNWAGIAGSK
                     GVKLPEFMSEEELKKFLDAIENVDFRSNTIRNKLIIKIIIFTGIRVSEAINIKMGDIS
                     EENDLYIIRIRAKGNKYRVVMIKKELIYDLLKNVNINYMSKDALLFVNKKGTPLTQSY
                     VSRIVEQLLFRAGIRKQKNGAHMLRHTFATLLYKKQKDLVLVQEALGHASLNTSRIYT
                     HFDNDKLKLAAQVAKELSDS"
     gene            1373..>2589
                     /locus_tag="RTF91_001726"
     CDS             1373..>2589
                     /locus_tag="RTF91_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase component I
                     family protein/class IV aminotransferase"
                     /protein_id="HDZ4944575.1"
                     /translation="MTLENCAVFGEYFYYDLKHILKAFNHKESKKCFKFIEKYKNDFY
                     ILMLADYELYRYFQNKNFTSKKAYLSIFAFKKRKKFQKEKIDEEKFIPEFINFLDQDN
                     YEENFIKVKKAISKGRVYQINLTQNLKFRSKMDSFELFKLLLSRQDTEFKAFIKDEKR
                     EILSFSPELFFKTKKRKIFTKPMKGTIKRDKDPIKDEENKIFLQNDIKNLSENVMICD
                     LLRNDLSKIIIKKSLKTKLFEIQSHPTLHQMTSSVQGKLKKNTSLYQIFKALFPCGSI
                     TGAPKLESIKFIKELEQRDRGIYCGTIGFIHKNKSKFSVAIRTLEKQNKIYAYSVGSG
                     LVWDSNLKDEFEELKLKSAILNPCNFYLFETMYFKNSQILFLKEHLLRLINSALKFNF
                     NTHNIFKDFYDIL"
BASE COUNT         1046 a          318 c          348 g          877 t
ORIGIN      
        1 ttatttcact cagaaagtaa aatgataaga gtatgtaaaa atagtaattt aattcatatc
       61 aaagtagaat aattctagta tatataaaaa agtttgaaaa ttatagtttt caatacaaaa
      121 ttataaattt tacatatttt taccttttat catatctttt tatgctttac ataagattta
      181 tttaataaaa atattttaat gtttttatat attgcatata aaaacaaact tttcaaaaaa
      241 agcttttttt tactaagtta atattaaaat acctttttta gttaaaagct aaaattttaa
      301 aatttaggaa aagtttttat gaaataccct ttagattgtg aagaaaattt tgaaaaatca
      361 ttcttatttt ggctagtaaa atatgtcaaa tttaaactca actcactatc taacaaggag
      421 ttaaaaaatc cacaagcttt agcagaggtt aattttactc ttacaaaagg tgtaaaaaat
      481 attgaagagc ttgatgcctt agtaaaaaaa gcaagaaatg ctggcttaag tggagtcaat
      541 acttatttta atcctttgaa aaaagttttt gaatatttaa atttttataa actttattct
      601 ttaaaacaga ttgatgaaga actcattgta gaagttttag caagcataac aggtgcttta
      661 tcagatgcga gtaaaaaaaa ttaccgtatt gccgtgatta atttttttga ttttttagac
      721 aaacaaaatg aagaagatga aaaagcacat atttttgata ttaatctcaa aaactgggca
      781 ggtatagcgg gatctaaagg agtaaaatta cctgaattta tgagtgaaga agaacttaaa
      841 aaatttcttg atgctattga aaatgtggat tttagaagca atactatacg caataaactc
      901 attattaaaa tcatcatttt tacaggcata cgggtaagtg aagctatcaa cataaaaatg
      961 ggtgatatta gtgaggaaaa cgacctttat attataagaa taagagcaaa aggtaataaa
     1021 tatcgtgttg taatgataaa aaaagaactt atttatgatt tgcttaaaaa tgtaaatatt
     1081 aattatatga gcaaagacgc cctgcttttt gtcaataaaa aaggcacccc acttacccaa
     1141 tcttatgtca gtcgtatagt agaacaactt ttatttcgtg caggaattcg caaacaaaaa
     1201 aatggcgctc atatgttgcg tcatactttt gccaccctac tttacaaaaa acaaaaagat
     1261 ttggttttag ttcaagaagc tttaggacat gcaagcttaa atacttcaag aatttatact
     1321 cattttgata atgataaatt aaaacttgcc gcacaagttg caaaggaatt aagtgactct
     1381 tgaaaattgt gctgtttttg gcgagtattt ttattatgat ttaaagcata ttttaaaagc
     1441 ttttaatcat aaggaaagca aaaaatgctt taaatttata gaaaaatata aaaatgattt
     1501 ttatatttta atgcttgctg attatgagtt atataggtac tttcaaaaca aaaatttcac
     1561 aagcaaaaaa gcttatttat ctatatttgc ctttaaaaaa agaaaaaaat ttcaaaaaga
     1621 aaaaattgat gaggaaaaat ttattcctga atttataaat ttcttagatc aagacaatta
     1681 tgaagaaaat tttatcaaag ttaaaaaggc gatttctaaa ggaagagttt atcaaatcaa
     1741 cctcactcaa aatttgaaat ttcgtagtaa aatggattct tttgaacttt ttaagctttt
     1801 actttctaga caagatactg aatttaaagc tttcataaaa gacgagaaaa gagaaattct
     1861 atctttttct cctgagcttt ttttcaaaac caaaaaaaga aaaatattta caaaacccat
     1921 gaaaggcaca attaagcgtg ataaagaccc tataaaagat gaagaaaata aaattttctt
     1981 acaaaatgat ataaaaaatc ttagcgaaaa tgttatgatt tgtgatcttt tgcgcaatga
     2041 tctttcaaaa atcatcataa aaaaaagctt aaaaaccaag ctttttgaaa ttcaaagcca
     2101 ccctacttta catcaaatga cttcaagcgt acaaggaaag cttaaaaaaa atacttcttt
     2161 gtatcaaatt tttaaagccc tttttccttg tggttctatt acaggtgcac caaaacttga
     2221 aagcataaaa tttatcaaag aactagagca aagagatcgt ggtatttact gtggaaccat
     2281 aggttttata cataaaaata aaagcaaatt tagcgtagcc atacgcacct tagaaaaaca
     2341 aaataaaatt tatgcttata gtgtaggcag tggtttagtt tgggactcaa atttaaaaga
     2401 tgaatttgaa gaattaaaac ttaagagtgc gattttaaat ccttgtaatt tttatctttt
     2461 tgaaacgatg tattttaaaa attcccaaat tttattctta aaagaacatt tactaaggct
     2521 tataaattca gccctcaaat ttaattttaa cactcacaat atcttcaaag atttttatga
     2581 tattttaaa
//
LOCUS       DAPWAA010000118         2200 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.119, whole genome shotgun sequence.
ACCESSION   DAPWAA010000118 DAPWAA010000000
VERSION     DAPWAA010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.119"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     repeat_region   12..2157
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=12..47
                     /rpt_unit_seq="attttaccataaagaaatttaaaaagggactaaaac"
BASE COUNT          934 a          335 c          309 g          622 t
ORIGIN      
        1 aaaaaaatga aattttacca taaagaaatt taaaaaggga ctaaaacatc attatcttca
       61 tcatccaacg tccaatcatt ttaccataaa gaaatttaaa aagggactaa aactcgtgag
      121 tcatcataac tttatcaagt tcaattttac cataaagaaa tttaaaaagg gactaaaact
      181 taggaaacta agatttgaag catgatgaaa ttttaccata aagaaattta aaaagggact
      241 aaaacattct gttcaaataa acaacagtat tataaatttt accataaaga aatttaaaaa
      301 gggactaaaa cttctttgaa ctgttgaagc ttgctcgcca attttaccat aaagaaattt
      361 aaaaagggac taaaaccctt ggctttcaag agctaatctc gctaagattt taccataaag
      421 aaatttaaaa agggactaaa acccaacaag aaccaagctt caattaacaa ttattttacc
      481 ataaagaaat ttaaaaaggg actaaaacct ttgccagtga aaaataattc actattgtat
      541 tttaccataa agaaatttaa aaagggacta aaactcattt tatgctttga aagggttgtt
      601 ttgaatttta ccataaagaa atttaaaaag ggactaaaac tccggctggt tttaggtatg
      661 ttgcaggtta attttaccat aaagaaattt aaaaagggac taaaacgtcc gaatcaaaga
      721 agtcctccgg aaagtcattt taccataaag aaatttaaaa agggactaaa actactcagg
      781 aaggcgagca agtttttgta ccattttacc ataaagaaat ttaaaaaggg actaaaacgg
      841 taagtcgtta ctgtgaagcg cgccgggcat tttaccataa agaaatttaa aaagggacta
      901 aaaccgtaac tttgtcacta ttactcttgc cctgatttta ccataaagaa atttaaaaag
      961 ggactaaaac gcttctggtt cagataattc aaatacttct attttaccat aaagaaattt
     1021 aaaaagggac taaaacagag cggtgttacg ctcccttggc tttctagatt ttaccataaa
     1081 gaaatttaaa aagggactaa aacttgccat acgcaattct ctaatcgaaa tcgattttac
     1141 cataaagaaa tttaaaaagg gactaaaacc taatgtcgct tggaacaaag accgttttaa
     1201 ttttaccata aagaaattta aaaagggact aaaacacaat attcctcaga acacgaaatt
     1261 aagctatttt accataaaga aatttaaaaa gggactaaaa cgaacacctt gagaatacat
     1321 cgaaattggc tattttacca taaagaaatt taaaaaggga ctaaaactag cggtgttacg
     1381 ctcccttggc tttctagatt ttaccataaa gaaatttaaa aagggactaa aactttattc
     1441 gtgttacgtg tgaaggtata aatattttac cataaagaaa tttaaaaagg gactaaaact
     1501 tatacaaggt tttactgcaa tgatatatat tttaccataa agaaatttaa aaagggacta
     1561 aaacattctg aagatattca atgtaacgca taccatttta ccataaagaa atttaaaaag
     1621 ggactaaaac acatcatgca acctgaatta taccttaaag attttaccat aaagaaattt
     1681 aaaaagggac taaaacttgt agaaaacgaa tgcgtttgtt tgctttattt taccataaag
     1741 aaatttaaaa agggactaaa acacttatcc tttctattaa aaatcgaact aattttacca
     1801 taaagaaatt taaaaaggga ctaaaacgcg gtgcaattag caacgactta ataaaagatt
     1861 ttaccataaa gaaatttaaa aagggactaa aaccctgcaa gaacaactca tttaaaatac
     1921 cttattttac cataaagaaa tttaaaaagg gactaaaaca tgctggcacc gataatgcac
     1981 cctatcaaaa ttttaccata aagaaattta aaaagggact aaaaccatta aacttaactg
     2041 gacccttagc agctcatttt accataaaga aatttaaaaa gggactaaaa cttctatgta
     2101 ctcgcagggt gtaccgcgtt aattttacca taaagaaatt taaaaaggga ctaaaactat
     2161 tttcttagga gtaatattat taagtttatt ttaccataaa
//
LOCUS       DAPWAA010000119         2115 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.120, whole genome shotgun sequence.
ACCESSION   DAPWAA010000119 DAPWAA010000000
VERSION     DAPWAA010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.120"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..280
                     /locus_tag="RTF91_001727"
     CDS             <1..280
                     /locus_tag="RTF91_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HDZ4944576.1"
                     /translation="RRIPSYEVDQNSYVANFKISALQNINSDDLKVQVLLTRPFTKDF
                     DQKLEGQVKNGILSIALPKLDKGRWELKLKFYGEEEIIGFFSYELNAQ"
     gene            277..>2115
                     /locus_tag="RTF91_001728"
     CDS             277..>2115
                     /locus_tag="RTF91_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HDZ4944577.1"
                     /translation="MKLRIFSSSRQIREYYNQNKKQNALLDNAICIGEFLDKVCLSNF
                     HKASSYESLLLMQEACLKSKDLEKKLGISAEFFSFLKNNEYLFSFFKELSLEKKSIED
                     LKNNDYYATYNEHLEILDEVYKNYLALLEKNSFYDSLSLPKNYTLNKDFLDECEVIVY
                     DLQGFLSKFEENLLSEISQIKEVILSFKTSKFNLEYLLKLDFLKTFDLKINTHYEVNL
                     SKQEILKEESFEARNSKIKLKAFELRALQCAFVMDEISHFVRKGLKPENITVITPDES
                     FCEFLRLFDKENMLNFANGISIKESLFYQKFQALYESASSVSFVYKNQEDYFEDTQMV
                     FDYHNTLLHSLKLDFIEFKKHFDEKCDFEYFEKLLALFLENEKQELIYLIEKELYFIK
                     NLLKNQSLTLKELIHLFFMQISQLSLSDVGGGKVTVMGLLESRGLCFDGVILVDFNEE
                     FIPKRSINELFLNNEVRKKAGLISYDRRENLQRFYYESLMKNALEVSICFVENEEKSK
                     SRFLDELDFEFFYETHTHQQAYLNALKLDYEGIKPNLTPIKAPVLKHNPFEFPLSFSR
                     FNLLENQKRTYYYRYILNLAEPRFLSDESKAKNQGNFIHKMLEIYYK"
BASE COUNT          800 a          209 c          331 g          775 t
ORIGIN      
        1 aagaagaatt cctagttatg aagtagatca aaattcttat gttgcaaatt ttaaaatttc
       61 tgcattgcaa aatataaatt ctgatgattt aaaagttcaa gttcttctta caagaccatt
      121 cactaaagat tttgatcaaa agctagaagg acaagttaaa aatggaattt taagtattgc
      181 tttgcctaaa ttagataaag gtagatggga gcttaaatta aaattttatg gagaagaaga
      241 aataataggt ttttttagct acgaattaaa tgctcaatga aattaagaat ttttagttct
      301 tcaagacaaa ttagagagta ttataatcaa aataaaaaac aaaatgcttt gttggataat
      361 gctatttgta taggtgagtt tttagataag gtttgtttga gcaattttca taaggcgagt
      421 tcttatgaaa gtttactttt aatgcaagaa gcttgtttaa aaagcaaaga tttagaaaaa
      481 aaactaggaa tttcagcaga atttttttca tttttgaaaa ataacgaata ccttttttct
      541 ttttttaaag agcttagttt agaaaaaaaa agcatagaag atcttaaaaa taatgattat
      601 tatgctactt ataatgaaca tttagaaatt ttagatgaag tctataaaaa ctatcttgct
      661 ttgcttgaaa aaaactcttt ttatgatagt ctttctttgc ctaaaaatta tacactcaat
      721 aaagattttt tagatgagtg tgaagttata gtttatgatt tacaaggttt tttaagtaaa
      781 tttgaggaaa acttattgag tgaaatttct cagattaaag aagtaatttt aagttttaaa
      841 acaagtaaat ttaatcttga atatctttta aagcttgatt ttttaaaaac atttgatcta
      901 aaaataaata cccattatga agtcaatctt tcaaaacaag aaattttaaa agaagaaagt
      961 tttgaggcaa gaaattcaaa aattaaactt aaagcttttg aattaagggc tttgcaatgt
     1021 gcttttgtaa tggatgaaat ttcacatttt gtacgtaagg gtttaaagcc tgaaaatatt
     1081 acagttataa ctccagatga aagtttttgc gagtttttaa ggctttttga taaagagaat
     1141 atgcttaatt ttgcaaatgg gatcagcatt aaagaaagtt tattttatca aaaatttcaa
     1201 gcgctttatg agagtgctag cagtgtttct tttgtttata aaaatcaaga agattatttt
     1261 gaagatacac aaatggtttt tgattatcac aatacacttt tacattcttt aaagcttgat
     1321 tttatagagt ttaaaaagca ttttgatgag aaatgtgatt ttgaatattt tgaaaaatta
     1381 cttgctttat ttttagaaaa tgaaaaacaa gagcttattt atttgataga aaaagaactt
     1441 tattttatta aaaatttatt gaaaaatcag tctttaacac ttaaagagtt gatccatctt
     1501 tttttcatgc aaatttcaca actttccctt agtgatgtgg gtggaggtaa ggttacggta
     1561 atggggcttt tagaaagtcg tgggctttgt tttgatgggg tgattttggt tgattttaat
     1621 gaagaattta taccaaaaag aagtattaat gaactctttt taaataatga agtgcgtaaa
     1681 aaagcgggat taattagcta tgacagaaga gaaaatttac aaagatttta ttatgaaagt
     1741 ttgatgaaga atgccttaga agtaagtatt tgttttgtgg aaaatgaaga aaaaagtaaa
     1801 tcacgctttt tagatgagct tgattttgaa tttttttatg aaactcacac tcatcaacaa
     1861 gcttatctta acgctttaaa attagactat gagggtataa aacctaattt aactcctata
     1921 aaagcccctg ttttaaagca taatcctttt gagtttccac tttcttttag tcgttttaat
     1981 ttattagaaa accaaaaaag aacttattat tatcgttata ttttaaattt agcagaacct
     2041 agatttttaa gcgatgaaag caaagcaaaa aatcaaggaa attttattca taaaatgctt
     2101 gaaatttatt ataaa
//
LOCUS       DAPWAA010000120         2030 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.121, whole genome shotgun sequence.
ACCESSION   DAPWAA010000120 DAPWAA010000000
VERSION     DAPWAA010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.121"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..1099
                     /locus_tag="RTF91_001729"
     CDS             <1..1099
                     /locus_tag="RTF91_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDZ4944578.1"
                     /translation="ALNKQKKQRAKNANLWIFADMASRADDNAEHLYRYVMNNHPKQK
                     IVFALRKDSTDYLRLKKEGFNLADPRSLYFKYLLYKASKIISSHIDKYIFNAFGGDTL
                     KTKEFVFLQHGVIKDDISNWVNKRKIDVFITSTKAEYNSIAGDFNHYKFSTKEVVLTG
                     LARWDALIKNNVLNTKQILIMPTWREYLSGKMQKYGVRAKNPDFIKSLYFQKWQEFLC
                     SKELEKLAKKYGYRVVFMPHPQVRMYLDDFNLPSYIITSYKTTIQELFCKSSLMITDY
                     SSVAFEMAVLNKPVLYYQFDKEEFFAKHIYSQGYFDYEKNGFGEVFTDSLNLFFYLNK
                     KINSLENIIFNTLKYYNYAICERIFTIIKIK"
     gene            1111..>2030
                     /locus_tag="RTF91_001730"
     CDS             1111..>2030
                     /locus_tag="RTF91_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002894130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDZ4944579.1"
                     /translation="MLGLNQRKLEKLKIDPFLFFKDAFRNKYRILNRVFNKIKPKKYR
                     AFSKYSIVCAVYNVEKYLDDFFKSIINQRLDFKNNIFIICVDDGSVDNSAQIIKKYQK
                     KYPKNIIYLYKENDGQASARNLGLKYLKENDLNVSWVTFTDPDDFLDRNYFYEVDKFL
                     SNNKNKMVSIVATNVMIYNHQNKFVSSHPLSFKFNIDKQIKYFNLLTNEMQSSTTAFF
                     ILDKIKKKNICFNESLALRSNFEDGLFCYEYMLKNFKDAIVYLKKPLYFYRKNIISTT
                     SKTQLNKDYYLSIGKFILNLFLEFEKKFGNT"
BASE COUNT          807 a          183 c          298 g          742 t
ORIGIN      
        1 ggctttaaat aagcaaaaaa agcaaagagc aaagaatgct aatttgtgga tttttgcaga
       61 tatggctagt agggctgatg ataatgcaga gcatttatat agatatgtaa tgaataatca
      121 tcctaaacaa aaaatcgttt ttgctttaag aaaggatagc acggattatt taagacttaa
      181 aaaagaaggt tttaatttgg ctgatccaag aagtttgtat tttaaatatc tactttataa
      241 ggctagtaaa atcatttctt ctcatataga taagtatatt tttaatgctt ttggtgggga
      301 tactttaaaa actaaagaat ttgtattttt gcaacatgga gtaatcaaag atgatatttc
      361 aaattgggta aataaacgaa aaatagatgt atttattaca agtacaaaag ctgaatataa
      421 ttccattgca ggtgatttta atcattataa atttagcaca aaagaagtag ttttaacagg
      481 gcttgcaagg tgggatgctt tgattaaaaa taatgtttta aatacaaagc agattttaat
      541 tatgcctact tggagagagt atttaagtgg aaaaatgcaa aaatatggag ttagggccaa
      601 aaatcctgat tttataaaat ctctttattt tcaaaaatgg caagaatttt tatgcagtaa
      661 agaattagaa aaattagcaa agaaatacgg atatcgtgtt gtttttatgc cgcatcctca
      721 agtaaggatg tatttagatg attttaatct accaagttat attataactt cttataaaac
      781 aactatacaa gagctatttt gtaaatcttc tttaatgata acggattatt caagtgttgc
      841 ttttgaaatg gctgttttaa ataaacctgt gctttattat caatttgata aagaagaatt
      901 ttttgcaaaa catatttatt ctcaaggcta ttttgattat gaaaaaaatg gtttcgggga
      961 ggtttttaca gatagtttaa atttattttt ttatttaaat aaaaaaataa attctttaga
     1021 gaatattata tttaatactt taaaatacta taattatgca atatgtgaaa gaatttttac
     1081 tataattaaa attaagtaaa tgagtggaga atgttaggat taaatcagag aaaattagaa
     1141 aaattaaaaa tagatccttt tttatttttt aaagatgctt ttagaaataa atataggatt
     1201 ttaaatagag tattcaataa aatcaaacct aaaaaatata gagctttttc taagtatagt
     1261 attgtttgcg cagtttataa tgtagaaaag tatttggatg attttttcaa gtccataatc
     1321 aatcaaagat tagactttaa aaacaatatt tttataattt gcgttgatga tggctcagtt
     1381 gataattcag cacaaataat taaaaaatat caaaaaaaat atccaaaaaa tataatttat
     1441 ttgtacaaag aaaatgatgg gcaagcaagt gctagaaatt taggtttaaa atatttaaaa
     1501 gaaaatgatt taaatgtttc ttgggttact tttactgatc ctgatgattt tttagataga
     1561 aattattttt atgaagtgga taaatttttg tctaataata aaaataagat ggtttctatt
     1621 gttgcaacaa atgtaatgat ttataatcac caaaataaat ttgtttcatc tcatccatta
     1681 agttttaagt ttaatattga taagcaaata aaatatttta atttattaac aaatgagatg
     1741 caaagttcaa caacagcatt ttttatattg gataaaatta aaaaaaagaa tatttgcttt
     1801 aatgaaagtt tagcattgcg tagtaatttt gaagatgggc ttttttgcta tgaatatatg
     1861 ttaaaaaatt ttaaagatgc tatcgtctat cttaaaaaac cattatattt ttatagaaag
     1921 aatattatta gcacaacttc aaaaactcaa cttaataaag attattattt atctataggg
     1981 aaatttattt taaacctttt tttagaattt gaaaaaaaat ttggaaatac
//
LOCUS       DAPWAA010000121         1996 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.122, whole genome shotgun sequence.
ACCESSION   DAPWAA010000121 DAPWAA010000000
VERSION     DAPWAA010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.122"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..225
                     /locus_tag="RTF91_001731"
     CDS             <1..225
                     /locus_tag="RTF91_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ4944580.1"
                     /translation="KYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHV
                     IFITLSSEDSFFEQGVKFEIISFDKFSLGF"
     gene            complement(222..956)
                     /locus_tag="RTF91_001732"
     CDS             complement(222..956)
                     /locus_tag="RTF91_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HDZ4944581.1"
                     /translation="MKPIIIFLNLFLIPLFAIDDLKNAFGEDYYKLDIVQKRQVFFTK
                     MNEMFDQSFKEIEQERAFIEAFFKDTYKTGFRTSSQTNLEKLITLKNKYRIENLYDFA
                     EYKKRVQRIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPNKKH
                     KIKIFDSLQDSVDSYVLNLNRHFAYEKFRDARAKFESEGKEITGLEAIKTLDSYSERK
                     GYYINLVTKIIKQYNLEKYDTDLNNI"
     gene            complement(931..1680)
                     /locus_tag="RTF91_001733"
     CDS             complement(931..1680)
                     /locus_tag="RTF91_001733"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDZ4944582.1"
                     /translation="MKFYKYCASGNDFIIANANEKQDRSTLAKELCNRYEGIGADGFI
                     VILPHEKYDFEWEFYNNDGSRAPMCGNGSRAAAHFAHHINKINPNMSFLTGAKIIKAN
                     VNHDRVEVSLGKIKSVQNTFEELGKTWQLCDTGVPHLVHFCENLDEFDTILCQKMRQK
                     YNANVNFVKILDKNSLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNEVKITPK
                     SGEEVRFKYKNEELFFEGKVKYCFEANYNFS"
     gene            complement(1677..>1996)
                     /locus_tag="RTF91_001734"
     CDS             complement(1677..>1996)
                     /locus_tag="RTF91_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDZ4944583.1"
                     /translation="ILEQMQILDKENKTFFVEIPLFFESGAYKNLGKVIVIYASKELS
                     LKRILQRDKLSLKSAKARLSSQIDIEEKLKKADFIIKNTSSYADFRQECVKVIQEISK
                     GKM"
BASE COUNT          616 a          329 c          252 g          799 t
ORIGIN      
        1 aaatatttca atttttatag tcaaatatcc aaaatcgctt atatttcaag tccaacttta
       61 gatattgatt tgattaaatt gcgtgctaag aaaattttac caaaggcttt ggagcttgga
      121 atttttcatg tgatttttat tactctttcg agtgaagata gtttttttga acaaggggtt
      181 aaatttgaaa ttatatcttt tgataaattt tcacttggat tttagatatt atttaagtca
      241 gtatcgtatt tttcaagatt atattgttta ataatttttg taacaagatt gatataatat
      301 cctttgcgtt cagagtaaga atctaaagtt ttaatagctt ctagtcctgt tatttcctta
      361 ccttcgcttt caaatttagc tcttgcatcg cgaaattttt cataagcaaa gtgacgattt
      421 aaatttaaaa cataagaatc aacactatct tgcaaactat caaaaatttt aattttgtgt
      481 tttttatttg gatgtcttaa atcaggaatt aaaccctttt caccccaagt ccattcccca
      541 aaaagattat ttgcttctct tgcaaagcgg cttgtgcccg tagcactttc aactaaagct
      601 tgggctatac ccatggattt tggaattctt tgaacgcgtt ttttgtattc tgcaaaatca
      661 taaagatttt caatgcggta tttgtttttt agtgtgataa gtttttcaag atttgtttgg
      721 cttgaagttc taaaacctgt tttataagta tctttaaaaa atgcttcgat aaaagctctt
      781 tcttgttcaa tttctttgaa gctttgatca aacatttcat tcatttttgt aaaaaaaact
      841 tgcctttttt gaactatatc aagcttgtaa taatcctctc caaacgcatt ttttaaatca
      901 tcaatagcga aaagtgggat taaaaaaaga ttaagaaaaa ttataattgg cttcaaaaca
      961 atactttacc tttccttcga aaaacaattc ttcatttttg tatttaaatc ttacctcttc
     1021 accactttta ggggtgattt tgacttcatt ttgtactttt ttatttaaaa atgctagata
     1081 aaaacaagct cccatacctg ttccacaagc taaggtttca tcttcaactc cgcgttcata
     1141 agtacgaact tttaaactat ttttatctaa aattttcaca aaattaacat tagcattata
     1201 tttttgtctc attttttgac aaagtattgt atcaaattca tctaaatttt cacaaaaatg
     1261 cactaaatgt ggaactccag tgtcgcaaag ttgccaagtt tttcctagtt cttcaaaagt
     1321 attttgcacg ctttttattt tacctaagga tacttcaact ctatcgtgat ttacatttgc
     1381 ttttattatc tttgcaccag ttaaaaaact catattaggg tttattttat tgatatgatg
     1441 tgcaaaatgt gccgcagctc ttgagccatt accacacata ggagctcttg agccatcatt
     1501 gttgtaaaat tcccattcaa agtcgtattt ttcgtgaggc aatatcacga taaatccgtc
     1561 tgcacctata ccttcataac gattacaaag ttctttagct aaggtgcttc tatcttgttt
     1621 ttcattagca tttgctatga taaaatcatt cccacttgca caatatttat aaaatttcac
     1681 atttttcctt tagaaatttc ttgtattact ttaacacatt cttgcctaaa atcggcataa
     1741 gaactagtat ttttaatgat aaaatctgct tttttcagtt tttcttcaat atctatttga
     1801 gaactaagcc ttgcttttgc agactttaag ctaagcttat ccctttgcaa tattcttttt
     1861 aggcttaatt ctttagatgc gtaaattact atgactttac ctaaattttt gtaagctcca
     1921 ctttcaaaaa aaagaggaat ttctacaaaa aaagttttat tttctttatc taaaatttgc
     1981 atttgttcta aaattt
//
LOCUS       DAPWAA010000122         1963 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.123, whole genome shotgun sequence.
ACCESSION   DAPWAA010000122 DAPWAA010000000
VERSION     DAPWAA010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1963
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.123"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..619)
                     /locus_tag="RTF91_001735"
     CDS             complement(<1..619)
                     /locus_tag="RTF91_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HDZ4944584.1"
                     /translation="MYNFFTKFFLALIFCSSFALANNNFITLNPSLPNSENTVIEAFS
                     YKCIHCYNYHKFGTLEKLRETFPNLHFKLYPVSLMNGDFAKEMNELFAFAQYKDEQNG
                     KDASYSDSLSHKLADVYFISYFLNKQRNFSNLDEFYDIGLKAMNVNKNEVLNFLNTPK
                     AKEILSEFQRANDIAKIYGTPAFVVNGKYQINPSAINSMQDLENLV"
     gene            complement(831..1637)
                     /gene="dsbI"
                     /locus_tag="RTF91_001736"
     CDS             complement(831..1637)
                     /gene="dsbI"
                     /locus_tag="RTF91_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide oxidoreductase DsbI"
                     /protein_id="HDZ4944585.1"
                     /translation="MSGTKMKDFSVKKRLSKWQDTRKPWLILIIVTIGLIFIAHFLFQ
                     KYLFMEPCEQCVYIRFDMFVMAIGGMIALINPASNIIKTFSYGLSFYGIWLGLEHCLT
                     LNHIHEMVHSENPFAGVNGCREIPIYPFNLPLHEWASSWFLPTGECGMDTPVVPENAY
                     NNLNAFQKFFIGTPPDFKNGLYSNGWYLIPGLNFMNMAICSLIAFICCFIVLFAMFMA
                     YILDKSKSGAKIFALVIVILVLVLKFIGEPKNPNQDTVSLNYLKWVILVE"
     gene            complement(1634..1939)
                     /locus_tag="RTF91_001737"
     CDS             complement(1634..1939)
                     /locus_tag="RTF91_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002908624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944586.1"
                     /translation="MKFLIKFARSIVVFAFSASALNEGKKYVILKTLDNLLIEIFSYY
                     CTHCYNYHKFNIMGKVKKKLPNLTYKFLCYKFMGDYGKLLKNSKILIKIVEEFSKQK"
BASE COUNT          742 a          304 c          247 g          670 t
ORIGIN      
        1 taactaaatt ttctaaatct tgcattgaat tgattgcact tgggtttatt tggtattttc
       61 cgttaacaac aaaagcaggg gttccgtaga ttttggctat atcattagct ctttgaaatt
      121 cacttaaaat ttctttagct ttaggggtat ttaaaaaatt taacacttca tttttgttta
      181 cattcatagc ttttaagcct atatcataaa attcatctaa atttgaaaaa tttctttgct
      241 tgtttaaaaa ataagaaata aaataaacat cagcaagttt atgagataaa ctatcagaat
      301 aacttgcatc tttaccattt tgttcgtctt tatattgggc aaaggcaaaa agttcgttca
      361 tttctttagc aaaatctcca ttcattaaac ttacaggata aagtttaaaa tgcaaatttg
      421 gaaaagtttc tctaagtttt tcaagagttc cgaatttatg ataattataa caatgtatgc
      481 atttgtaaga aaatgcttct attacagtat tttcagagtt aggtaaactc ggattaagag
      541 taataaaatt attatttgcc aacgcaaaac ttgaacaaaa tataagagct aaaaaaaatt
      601 ttgtaaaaaa attatacata atatatcctt gttaaataaa attttcaaag gcaattttat
      661 ttaaaaaaaa caaacaagcc caaatttatt ttgggctaat tattattttt agggttgaaa
      721 gcttaatcaa cgctaagtag cttgataacc tacctgaact gttaaattga attttaaact
      781 gaaagttctt tagcgccccg attaaattca tcaattttag gttttagttt tcactccact
      841 aagatcaccc attttaaata gtttaaactg actgtatctt gatttggatt ttttggctca
      901 cctataaatt taagcaccaa aactaaaata acaattacta atgcaaaaat tttagcgccg
      961 gatttacttt tatctaaaat ataagccata aacattgcaa aaagcacaat aaaacaacat
     1021 ataaatgcta taagagagca aattgccata ttcataaaat ttaaaccagg aattaaatac
     1081 caaccattac tataaagtcc atttttaaaa tcaggtggag ttcctataaa aaatttttga
     1141 aaagcattga gattattgta agcattttcc ggaacaacag gggtatccat tccgcattct
     1201 cctgtaggta aaaaccaact agaagcccac tcatgcaagg gtagattaaa tggataaata
     1261 ggaatctcac gacacccatt tacacccgca aaaggatttt cagaatgaac catctcatgg
     1321 atatgattta aggttaaaca atgctccaag ccaagccaaa ttccataaaa agataaacca
     1381 taagaaaaag tttttataat attgcttgca ggattgatca atgcaatcat accgcctata
     1441 gccataacaa acatatcaaa ccttatgtat acacattgtt cacaaggctc cataaaaaga
     1501 tatttttgaa atagaaagtg cgctataaag ataagtccta tagtgactat aatcaaaatt
     1561 aaccaaggct tacgcgtatc ttgccactta gaaagtctct tttttacgga aaaatctttc
     1621 atttttgtac cgctcatttt tgtttgctaa attcttcaac aattttaatt aaaatcttgg
     1681 aatttttaag aagttttcca taatctccca tgaacttgta gcataaaaat ttataagtta
     1741 aattaggtaa ttttttctta accttaccca tgatattaaa tttatgataa ttataacaat
     1801 gtgtacaata ataggaaaaa atttcaatca acaaattatc aagggtttta agaattacat
     1861 attttttacc ttcgttcaat gcgctagcac taaaagcaaa cacaacaatg gatcttgcaa
     1921 attttattaa aaatttcatg attttcctta aaatttaaat tta
//
LOCUS       DAPWAA010000123         1791 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.124, whole genome shotgun sequence.
ACCESSION   DAPWAA010000123 DAPWAA010000000
VERSION     DAPWAA010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.124"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            1..411
                     /locus_tag="RTF91_001738"
                     /pseudo
     CDS             1..411
                     /locus_tag="RTF91_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872925.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="restriction endonuclease"
     gene            423..1514
                     /locus_tag="RTF91_001739"
     CDS             423..1514
                     /locus_tag="RTF91_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDZ4944587.1"
                     /translation="MEENPLYLKEQIITYLGNKRSLLDFLNQGFLVAKEQLKKDKFSF
                     CDIFSGSGIVSRFAKAYSSYILANDLEDYSKLINECYLANKDKNLLQNLKKYHKNLTR
                     NLDFQKGFISELYAPKDDDCIKENERVFYTFKNALYLDTIRQKIENEIPKELRHFFIA
                     PLIYEASVHSNTSGVFKGFYKGKDGIGKFGGEGQNALKRIKGEIKLKMPIFSNFYCEF
                     EVVQKDANTLAKELDKFDVVYLDPPYNQHPYSSNYFMLNLLANYKKPEEISKISGIPK
                     DWNRSTFNKLKFAEDALFELVNDLKARVILLSYNCEGFIKKENFLKRLNTLGKCQILE
                     QKYNTFRASRNLKNRNIHLHEQLYILLKN"
BASE COUNT          672 a          194 c          282 g          643 t
ORIGIN      
        1 cagaatttga tacaaatttt tttgaaaata aaataaaacc agatggtgga gttttgtttt
       61 taagaaaaaa agatgatggc agttataaaa aaatattatt aataactgaa gctaaacgac
      121 aaggtacaaa tgatgttcgt caaaagcaag gaaaaaataa ccccttttgt ttgtttcggt
      181 tggggttgtg attttgctag tgatgaaaaa actgttttag ctaaattaaa tgtcttaaat
      241 gaattttatt atcttaataa aacttacatt tttaaagctg atggaaatag tgaccataat
      301 tatttttctc ctgttagtat gtattttaga gaagagaaat gggaggttaa agaaatgttt
      361 gagataatga aagagattac agaaacttct ttaaggtatt atatttttta acggaataga
      421 ctatggaaga aaacccgctt tatttaaagg aacaaattat aacttattta ggaaacaagc
      481 gttctttgct tgatttttta aatcaaggct ttttagttgc aaaagagcaa ttaaaaaaag
      541 acaaattttc tttttgcgat atttttagtg gctcaggtat tgtaagtcgt tttgcaaagg
      601 catattcaag ttatattttg gctaatgact tagaagatta ttcaaagctc attaatgaat
      661 gttatcttgc taataaagat aaaaatttgc tccaaaattt aaaaaaatac cataaaaatt
      721 taacccgaaa tttagatttt caaaaaggtt ttattagtga gctttatgct ccaaaagatg
      781 atgattgcat taaggaaaat gaacgtgttt tttatacttt taaaaatgct ttatatcttg
      841 atactataag gcaaaaaatt gaaaatgaaa ttccaaaaga attaagacat ttttttatag
      901 ctcctttaat ttatgaagcc agcgtgcatt caaatactag tggagttttt aagggttttt
      961 acaagggtaa agatggtatt ggaaaatttg gcggagaagg gcaaaatgca ctcaaacgta
     1021 ttaaaggaga aataaagctt aaaatgccta ttttttcgaa tttttattgt gaatttgaag
     1081 tagtgcaaaa ggatgcaaat acacttgcaa aagagcttga taaatttgat gtagtttatc
     1141 ttgacccacc ttacaatcag cacccttata gttctaatta ttttatgtta aatttacttg
     1201 caaactataa aaaacctgaa gaaatttcta aaatcagtgg tattccaaaa gattggaacc
     1261 gtagcacttt taataagtta aaatttgctg aagatgcttt atttgaactt gttaatgatt
     1321 taaaagcaag ggtgatttta ctttcttata attgtgaagg ttttattaag aaagaaaatt
     1381 ttttaaagcg tttaaacact cttggaaaat gtcagatttt agagcaaaaa tataatactt
     1441 ttagagcttc tcgcaatctt aaaaatcgca atattcatct tcatgaacaa ctttatattt
     1501 tacttaaaaa ttaaattttg tgctaaaatt atattttata aaaagcgagg gattgatgaa
     1561 actaaaacta tcttttacat tgatggtatt tggcgttttt aaactatcgt tatagctatt
     1621 gatccaaatt tcattttcaa aaatatctcg atttttctgc caataaagac aaatttttag
     1681 taggaaaaag tggatttgaa attttagcaa aaaatgctaa tatctttttt aatattctta
     1741 tggttgattt tttattttaa attgtaaaaa atttaaaaca gaactggcaa a
//
LOCUS       DAPWAA010000124         1777 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.125, whole genome shotgun sequence.
ACCESSION   DAPWAA010000124 DAPWAA010000000
VERSION     DAPWAA010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1777)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1777)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.125"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            293..466
                     /locus_tag="RTF91_001740"
     CDS             293..466
                     /locus_tag="RTF91_001740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944588.1"
                     /translation="MNKIIEDEKLRNDFINKILKNSEFMEEFERMVDLHINDKISMLT
                     DIDQEKSQIGGLE"
     gene            463..1014
                     /locus_tag="RTF91_001741"
     CDS             463..1014
                     /locus_tag="RTF91_001741"
                     /inference="COORDINATES: protein motif:HMM:NF017885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HDZ4944589.1"
                     /translation="MTYKEIKDKTPYEILDLLEMKEPPFNPFEIAQKLGINVVKDLDL
                     DKIDTEGQISVDEKGEPIIWINPLKNENRQRFTLAHELGHLANDILPSIENPIIDSYE
                     TLYRSNTYGGIETRANQFAARLLMPLRQIEDFIAECRKTTPDLKAAEAILLIASKFEV
                     SKQAVFHRLKNVGLIKQDYIYPF"
     gene            complement(1011..1295)
                     /locus_tag="RTF91_001742"
     CDS             complement(1011..1295)
                     /locus_tag="RTF91_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944590.1"
                     /translation="MDRISADIRQGVSKRFINAIYNHNNELVLEYLKNGMSVTKECMG
                     EEPMFYAVTHNNFGAILLLLKYGAILDKEHLEESNKDFSKEALEFLASLL"
     gene            complement(1355..>1777)
                     /locus_tag="RTF91_001743"
     CDS             complement(1355..>1777)
                     /locus_tag="RTF91_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HDZ4944591.1"
                     /translation="SSPKEQLESENKYKILKFYKTNASLGGGGINDLIDYSKLIIDEK
                     LLSFFGSKNCEFITCYGESMEPLIKDGSICIVDRNKTFKDKSICVINTRDGLFIKQVL
                     KQDDGVILHSLNPLYEDIFYKNGDFLLIGAVIGELSKI"
BASE COUNT          651 a          257 c          242 g          627 t
ORIGIN      
        1 gaacttttga ttatgaattt ttagcaagct aagagagtaa aaatactctc tttaatattt
       61 aattttgtaa aaatatgata aagtaccttt aaaattaaaa ataatttaag gatttattat
      121 agaaaacaat tataccaatt ctgatattat tgctattgca agttcttatc taacttatgg
      181 aagtttaatt gttactattg ctactttctt aacagctgct attgccatag ggcttactat
      241 atattataac cgtgataaac aaagattaat aaaagaaaca actgatgtat ttttgaataa
      301 aattatagaa gatgagaaat tacgcaatga ttttataaat aaaattctaa aaaatagtga
      361 atttatggaa gaatttgaaa gaatggtcga tttacatata aatgataaaa tatctatgtt
      421 gacggatatt gatcaagaaa aatcacaaat aggaggtttg gaatgactta taaagaaata
      481 aaagataaaa ccccttatga aattttagat ttattggaaa tgaaagaacc accattcaat
      541 ccgtttgaaa ttgctcaaaa attaggtata aatgtagtta aagatcttga tcttgataaa
      601 attgacactg aaggtcaaat tagtgtagat gaaaaaggtg aacctattat ttggataaat
      661 ccgcttaaaa atgaaaatag acagcgtttt acattggcac atgaattagg gcatttagct
      721 aatgatattt tacctagcat agaaaatcct attattgata gttatgaaac cctttataga
      781 agcaatacat atggtggaat agaaactaga gccaatcaat ttgcggcaag actacttatg
      841 cctcttcgac aaatagaaga ttttatagca gaatgcagaa aaacaacacc tgatttaaag
      901 gcggcggaag caatattact tattgcttca aaattcgaag tttcaaagca agctgttttt
      961 cacagactta aaaatgtagg tctgataaaa caagattata tatatccttt ttagagcaaa
     1021 gaggctaaaa attctaaagc ttctttgcta aaatctttat tgctttcttc tagatgctct
     1081 ttgtctaaaa tagctccgta ttttaataaa agtaaaatcg ctccaaaatt attgtgagtt
     1141 actgcataaa acataggctc ttcgcccatg cattctttag taacactcat gccgttttta
     1201 agatattcta aaacaagttc attgttatgg ttgtaaattg cgtttataaa tcttttgcta
     1261 acaccttgtc ttatgtctgc tgatattcta tccatcttta tatccttttg ttttgataag
     1321 acaacattag cttcgtttag ctgaatgtgt gctgtcatat cttggaaagt tctccaatta
     1381 ccgcaccaat taacaaaaaa tctccatttt tataaaagat atcttcatat aaaggattta
     1441 aagagtgtaa aatcactcca tcatcttgct ttaaaacttg ttttataaag agtccatctc
     1501 tagtattaat cacacaaatg cttttatctt taaaagtttt atttctatct actatacaaa
     1561 ttgaaccatc ttttataagt ggttccatac tctctccata acaagtgata aactcacaat
     1621 ttttacttcc aaaaaagctt aatagttttt catctatgat aagtttagaa taatctatta
     1681 aatcattaat cccacctccg cccaaacttg catttgtttt ataaaatttt aaaatcttat
     1741 atttattttc actttctaat tgttctttag gagagct
//
LOCUS       DAPWAA010000125         1761 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.126, whole genome shotgun sequence.
ACCESSION   DAPWAA010000125 DAPWAA010000000
VERSION     DAPWAA010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1761)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1761)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.126"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..1241
                     /gene="recG"
                     /locus_tag="RTF91_001744"
     CDS             <1..1241
                     /gene="recG"
                     /locus_tag="RTF91_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDZ4944592.1"
                     /translation="KRLQAKKMHFKAHHIEVFSIANWLKNLPFSLTEDQHNALKDIEK
                     DLHSNEAKRRVIMGDVGCGKTLVLLGAALMVYPKQAILMAPTSILAYQLYEEAKKFLP
                     DFMNILLIKGGKKEKNLEQNIQKANLIIGTHALTHLQSHNAVLVMIDEQHRFGSAQRE
                     KIHSLNKKEFAPHFIQFSATPIPRTLSMIQSELLNFSFIKQMPFKKDITTYCIQNEGF
                     VKLNEKIKEEIAKNHQIIIIYPLVNASDSIPYLSLEQAREYWESHYEKVFVTHGKDKQ
                     KDEILERFRDEGNILLSTTVVEVGISLPRLSMIVIVGAERLGLATLHQLRGRVGRVGL
                     KSTCYLYTKLKEIPNRLKEFASTLDGFKIAELDLKNRLSGDLLDGFIQHGNEFKFFDF
                     SKDEEILEEVKKDLAKKMPN"
     gene            complement(1238..1621)
                     /gene="ctb"
                     /locus_tag="RTF91_001745"
     CDS             complement(1238..1621)
                     /gene="ctb"
                     /locus_tag="RTF91_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="truncated hemoglobin Ctb"
                     /protein_id="HDZ4944593.1"
                     /translation="MKFETINQESIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWK
                     EHKAKIGNFWAGMLLGEGDYNGQPLKKHLDLSPFPQEFFEVWLKLFEESLNMVYSEEM
                     KNVILQRAQMIASHFQNMLYKYGGH"
BASE COUNT          608 a          243 c          301 g          609 t
ORIGIN      
        1 taaagcgttt acaagctaaa aaaatgcatt ttaaagctca tcatatagag gtttttagca
       61 tagctaattg gcttaaaaat ctgccttttt ctctcactga agatcaacat aatgctttaa
      121 aagatataga aaaagattta cattcaaacg aagctaaaag gcgtgtcatt atgggtgatg
      181 tgggttgtgg taaaactttg gttttgcttg gtgcggcttt gatggtttat cctaagcaag
      241 ctattttaat ggcccctact agtattttag catatcagct ttatgaggaa gctaagaaat
      301 ttttgcctga ttttatgaat attttgttga ttaaaggagg taaaaaagaa aaaaatttag
      361 agcaaaatat tcaaaaagca aatctcatca taggtactca tgctttaact catttacaaa
      421 gtcataatgc tgtgcttgta atgatagacg aacaacatcg ttttggttcg gctcagcgtg
      481 agaaaattca ttctttaaat aaaaaagaat ttgcacctca ttttatacag ttttcagcta
      541 cgcctattcc aagaactttg agtatgatac aatcagaact tttaaatttt agttttatta
      601 agcaaatgcc ttttaaaaaa gatattacaa cttattgcat acaaaatgaa ggttttgtca
      661 agcttaatga aaagatcaaa gaagaaattg ctaaaaatca tcaaattatc attatttatc
      721 ctttagtcaa tgcaagtgat agcattcctt atctttcttt agaacaagct agagagtatt
      781 gggaaagtca ttatgaaaaa gtttttgtaa ctcatggtaa ggataagcaa aaagatgaaa
      841 ttttagagcg ttttagagat gagggaaata ttttattaag cactacggtt gtggaagtgg
      901 gtatttcttt gccaagattg agtatgatag tgattgtagg agcggaacgt ttaggacttg
      961 ctaccttaca tcaacttcgt ggtcgtgtag gtcgtgtagg gcttaaaagc acttgctacc
     1021 tttatactaa acttaaagaa attccaaatc gtttaaaaga atttgctagc actttagatg
     1081 ggtttaaaat agcagaactt gatcttaaaa atcgtttgag tggagatttg ctcgatggtt
     1141 ttatacaaca tggaaatgag tttaaatttt ttgacttttc taaggatgag gagattttag
     1201 aagaggtaaa aaaagatttg gcaaaaaaaa tgccaaatta atgtccgccg tacttataaa
     1261 gcatattttg aaaatgcgag gctatcattt gcgcgcgctg taaaatgaca tttttcattt
     1321 cttcactata aaccatattt aaactttctt caaaaagttt tagccaaact tcaaaaaatt
     1381 cttgaggaaa aggagataga tctaaatgct tttttaaggg ttgtccatta taatcacctt
     1441 cgcctagaag catgcccgcc caaaaatttc ctatttttgc tttatgttct ttccattctt
     1501 catcgcttgt tccgatagca ttgttaaaaa tagggcctaa atccttatct tttctaactt
     1561 tttcataaaa tatttccatg agttttgcta tgctttcttg attaattgtt tcaaatttca
     1621 tataagcctt tcttaaatgt taattttatg gcgttaatat agcaaaaata agataaatta
     1681 aatttaacat aagttaagaa tggaaaatgt atataatgaa agattattta gaacttttat
     1741 ctagcgtagg aaaattaaaa a
//
LOCUS       DAPWAA010000126         1705 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.127, whole genome shotgun sequence.
ACCESSION   DAPWAA010000126 DAPWAA010000000
VERSION     DAPWAA010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.127"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..762)
                     /locus_tag="RTF91_001746"
     CDS             complement(<1..762)
                     /locus_tag="RTF91_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ4944594.1"
                     /translation="MLFFEISNLNYAYGNEIILKNINLSYDNKDFLSIIGPNGAGKST
                     LVKLILGLLKSKNEIDFKDLQRKEIGYVPQHTLANPNFCPRVLEIVLMGLVSKKIFGF
                     YNKEDKEKAMQALKSVGMEKFWNKTIDSLSGGQRQRVFIARALASECKMLILDEPTAS
                     VDSKSAIQIFELLSSLHQKGMGILLICHDINLVLAYSDKIAHLNKELFLHTNTKEKEK
                     SSFLKHLYENHSHFCDVEMSLNACFCDEENCDSKKL"
     gene            complement(775..1644)
                     /locus_tag="RTF91_001747"
     CDS             complement(775..1644)
                     /locus_tag="RTF91_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HDZ4944595.1"
                     /translation="MKKILLFILSLGISYTFTQAKNLEQDQNTSNSLVSVSIAPQAFF
                     VKKIAADTLNVNVILPPNSDEHNFEFKPNIMKKLEKSDIYFTIGLEFEKVFIDKFKQN
                     FPKLQVVNMQKNIALIQTHDEHEHSHEHFDPHTWLDPILVQTMALNIYNALIQKYPQN
                     KNLYKQNLDQFLADLDSLNLQIASKLEKLKNREFVVYHPSWTYFAKRYNLTQIPIEIL
                     GKEPKSKDLQNLITLMKNKNLKVIFVQNGFPENAAKTLAKECDAKIYKIDHLSYDWKN
                     ELLKTADAFSHNL"
BASE COUNT          556 a          228 c          248 g          673 t
ORIGIN      
        1 tagttttttg ctatcgcaat tttcttcatc acaaaaacaa gcatttaaac tcatttctac
       61 atcgcaaaaa tgagaatgat tttcgtataa atgttttaaa aatgaacttt tttctttttc
      121 ttttgtattg gtatgcaaga aaagttcttt gtttaaatgt gcaattttat cgctataagc
      181 tagcacaagg ttaatatcat ggcagatgag taaaattccc ataccttttt ggtgcaagga
      241 acttaaaagt tcaaaaattt gtatagcgga cttactatca acacttgctg taggttcatc
      301 taaaataagc attttgcact cactagctaa agctcttgcg ataaaaacgc gttgtctttg
      361 tcccccgctt aaagaatcaa tcgttttatt ccaaaatttt tccattccta cactttttaa
      421 agcttgcatt gctttttctt tgtcttcttt gttataaaaa ccaaaaattt ttttactgac
      481 aagtcccata agaacgattt caagtactct tggacaaaaa ttaggattgg ctagagtatg
      541 ttggggaaca tagcctattt cttttctttg aagatcttta aaatcgattt cgtttttgga
      601 ttttaaaagt cctaagataa gttttacaag ggttgatttc cctgcaccat ttggacctat
      661 gatcgagaga aagtctttat tgtcatagct aagattgatg ttttttaaga tgatttcatt
      721 tccgtaagcg tagttgagat tagaaatttc aaaaaaaagc atcaaaaaac ctgattataa
      781 attatgagaa aaggcatcag ctgtttttaa aagttcattt ttccaatcat aagataaatg
      841 atctatttta taaatttttg catcacattc tttagcgagt gtttttgctg cattttcagg
      901 gaaaccattt tgaacaaaaa tgacctttaa gtttttgttt ttcattagag taataaggtt
      961 ttgtaaatct ttgctttttg gttctttacc taaaatttct ataggaattt gcgtaagatt
     1021 atagcgtttt gcaaaatatg tccaagaagg gtgataaacc acaaattctc tgttttttaa
     1081 tttttctaat tttgatgcaa tttgtaaatt taaactatct aaatctgcta aaaattgatc
     1141 taaattttgt ttatataaat ttttattttg tggatatttt tgaattaaag cattgtaaat
     1201 atttaaagcc atggtttgga ctaaaatagg atctaaccaa gtgtgaggat caaagtgttc
     1261 atgagagtgt tcatgttcat catgggtttg aatcaaagct atattttttt gcatatttac
     1321 aacttgaagt tttggaaaat tttgtttgaa tttatctata aaaacttttt caaattctaa
     1381 gcctatagtg aaataaatat cgcttttttc aagttttttc ataatatttg gtttaaattc
     1441 aaaattatgt tcatcgctgt ttggaggtaa aattacattg acatttagag tatctgcagc
     1501 tattttttta acaaaaaatg cttgaggtgc tatactaaca ctaactaaac tgttgctagt
     1561 attttgatct tgctctaaat ttttagcttg tgtgaaggta taagatattc ctaaagataa
     1621 aataaataat aaaatttttt tcaagatatt tccttaataa tataaattta tttcaaatta
     1681 taacgatatt aagcttaata catga
//
LOCUS       DAPWAA010000127         1657 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.128, whole genome shotgun sequence.
ACCESSION   DAPWAA010000127 DAPWAA010000000
VERSION     DAPWAA010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.128"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(1..167)
                     /locus_tag="RTF91_001748"
                     /pseudo
     CDS             complement(1..167)
                     /locus_tag="RTF91_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013463606.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
BASE COUNT          596 a          247 c          132 g          682 t
ORIGIN      
        1 agttttttac tttctaattt tttaataacc aaatcttgtt ctaaattttt tatttctaag
       61 ttttgttttt taataggaat agagttaagc tcattttgaa atttattttg taaaacttga
      121 ttttcttgaa tcaagtttga aatttgagtt tgcaatgtaa acaattcttt ttctgtaaat
      181 tgattttttt tctctaactc gttaacatat ttaattaata ttgaattaaa attacattct
      241 aaatttaata tttttttatc atctatatcc atatgtaaac ataaatttat aaattttatt
      301 gcatcataaa atttatgttg atattcacaa atcttagctg caataaatga aatataagga
      361 tatttagaat ttgcattttg aataaaaaaa ataaaaacta tgctaaatga tcccgcccag
      421 ttgctagaaa ataataaatt aataaatttt tcttgtcttt ccattacaac ctttttaaga
      481 tatacttctg cttcatcaat tctatcattt gttagcaaac aatacatctt ataaatccta
      541 tatttatcat tgtcatagtc atactcaagt gcattatcca aatattgaca caatataccg
      601 cacttttctt ttactttaac gccaatccaa aataaatgaa ataaaataaa tgcattttga
      661 taacaattaa ttctactaca taacaatcta tagtttgatt ttaaaatttc ataataatct
      721 tcatcattaa aaatttcata attattaaaa aattctgcac ttgatattaa cttagcaatt
      781 tttacaactg cactatttgt tccataaatt ttttttgact tagacataaa aactatatca
      841 aacaacaaaa gctctaaatt actaaatttt tcaaatttcc ttattgagtt aatgtttatt
      901 acttttttat cattaaataa acttacgatc gtttcattag tatctacatc atctcctaca
      961 attacaattg aatgattttt ttctaaattt accttaataa tttcataagc taacgcagca
     1021 ttcgtcgcat gatacataga ggttaaatga aattttctaa tattagaata tccatgaata
     1081 gcatccccag ttctaatatg aattgaaaaa aaattatcta atttattagc acattgttct
     1141 gcatatttca ttattgactt taaattagat ttaaaaccta tagtattcca taaaattgca
     1201 catgaatctc tatattcttt ttcatttaca tcactaaatt tatggttaaa ttcatatatc
     1261 tcaactccta aatattcttt ttccgatttt tcaaattgtg taatattttg atctaatgtt
     1321 aaatttttgc tatctaaatc aactacaaaa tgtttttctg gaagtttgct aagaaaatac
     1381 ctgcttaaaa aattcgaatc gaaaatattt tccttgtatt caacactcat tcctataatt
     1441 ctagattttt catctcctct aaaattaata ttataagaat tatctttata aaatccatta
     1501 gattcccaat aaattttaac actataattt ttaaatcgtt gcgatatgta aagtgcattt
     1561 aaaatggcta caattctaga acccatacca tcagtcctat tagctaaaat agttttcatt
     1621 aaatcctctt tctgttaaat tatctcttcc aaacttc
//
LOCUS       DAPWAA010000128         1641 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.129, whole genome shotgun sequence.
ACCESSION   DAPWAA010000128 DAPWAA010000000
VERSION     DAPWAA010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.129"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            111..818
                     /gene="ubiE"
                     /locus_tag="RTF91_001749"
     CDS             111..818
                     /gene="ubiE"
                     /locus_tag="RTF91_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDZ4944596.1"
                     /translation="MQKQEKIIEMFNQIAPTYDKANRILSFGADVAWRKKACQTVMSL
                     YLKKDLRIADIACGTGDMIEIWQESALKMEKNILNIKGVDPSYGMLSVAKEKFPNVEF
                     IEAGAQNLPLESQSLDILSISYGIRNVVERQKALNEFARVLQKDGILVVLEFTKREKG
                     GFIAACRDFYLKNILPSIGGIISKNKSAYEYLPNSIEGFLSKEEFILELKNAGFEILD
                     YKSFSFGVSSMFIAKKL"
     gene            815..>1641
                     /locus_tag="RTF91_001750"
     CDS             815..>1641
                     /locus_tag="RTF91_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDZ4944597.1"
                     /translation="MTPTELNLKVKALLETHFDDIVLSGEISKITLHGSGHWYFDLKD
                     ERSSIACAMFKGANLKVGFKPAVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLE
                     AQFLALKECLQKEGLFDAHFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAK
                     IYLFDALTQGNNAAFSLVQALKKADDMNLDVLIIARGGGSREDLFCFNDENLAREIFK
                     ARTPIISAIGHEIDYVISDFVADFRAPTPSAAIDTLFYSKLDLEQSLDLAEEKLTQL"
BASE COUNT          607 a          182 c          310 g          542 t
ORIGIN      
        1 tttaaagata agaataaaaa tattttctct aaaataatca ataataaaaa taaattttgc
       61 aaattgctta aaaaatcaag taaaaatttg aaaatttaca aaggataaga atgcaaaaac
      121 aagaaaaaat tatagaaatg tttaatcaaa ttgctcctac ttatgataaa gctaatagaa
      181 ttttaagctt tggtgctgat gtagcatggc gtaaaaaagc ttgtcaaaca gtgatgagtc
      241 tatatttaaa aaaagattta agaatcgctg atattgcttg cggcacagga gatatgatag
      301 aaatttggca agagagcgct ttaaaaatgg aaaaaaatat tttaaatatt aaaggcgttg
      361 atccaagtta tggtatgtta agtgttgcaa aagaaaaatt tccaaatgtt gaatttatag
      421 aagcaggggc gcaaaattta cctttagaaa gtcaaagttt ggatatttta agtattagtt
      481 atggtattcg caatgttgta gaaagacaaa aagccttaaa tgaatttgct agagtacttc
      541 aaaaagatgg tattttagta gttttagaat ttacaaaaag agaaaagggt ggttttatag
      601 cagcttgtag ggatttttat cttaaaaata ttttgccaag tataggtgga ataatcagta
      661 aaaataaaag cgcttatgag tatttaccaa attctattga aggattttta agcaaggaag
      721 agtttatttt agagcttaaa aatgctggtt ttgaaatact tgattataaa agttttagct
      781 ttggcgtgag ttcaatgttt atagcaaaaa aactatgaca ccaacagaat taaatcttaa
      841 agtaaaggct ttattagaaa cacactttga tgatattgtt ttaagtggag aaatttcaaa
      901 aatcaccttg cacggttcag ggcattggta ttttgatttg aaagatgaaa gatcgagtat
      961 agcctgtgct atgtttaaag gagctaattt aaaagttgga tttaaaccag cagtgggaga
     1021 ttttttagag ctttgtggaa gtgtgagttt atatcctgaa agtggccgtt atcaatttat
     1081 cgctacaagt atgaaaaaag caggatttgg agatttagaa gcacaatttt tggctttaaa
     1141 agagtgtttg caaaaagaag gactttttga tgcacatttt aaaaaatctt taccaaaatt
     1201 tcctaaaaaa gtaggtatta tcacttcaaa aacttcggcc gccttgcaag atatgttaaa
     1261 acttatccat caaaaagaat attttttggc aaaaatttat ctttttgatg ctctcactca
     1321 aggaaataat gcagcttttt ctcttgtcca agctttaaaa aaagctgatg atatgaattt
     1381 agatgttctt attatagcac gcggtggagg aagtagggaa gatctttttt gttttaatga
     1441 tgaaaattta gcaagagaaa tttttaaggc gagaactcct attatttcag ctataggaca
     1501 tgagattgat tatgttatta gtgattttgt tgcagatttt agagccccaa caccttcagc
     1561 tgctatagat actttgtttt attctaagct agatttagag caaagcttgg atttagcgga
     1621 agagaaattg acgcaacttt g
//
LOCUS       DAPWAA010000129         1628 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.130, whole genome shotgun sequence.
ACCESSION   DAPWAA010000129 DAPWAA010000000
VERSION     DAPWAA010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.130"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..219
                     /locus_tag="RTF91_001751"
     CDS             <1..219
                     /locus_tag="RTF91_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDZ4944598.1"
                     /translation="PLDDARGSRNKKLLKDAGAMTSEQIRKKYNLPAYDSSHCEIDGE
                     TDFDLLGKYHDEYSKLLNDAIKKAKENE"
     gene            212..>1628
                     /locus_tag="RTF91_001752"
     CDS             212..>1628
                     /locus_tag="RTF91_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002903366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944599.1"
                     /translation="MNENIKIDFAQVNFHIKEFQKVYILENCKLYFYKPYHLKTQDKE
                     KGREFKNQDKDNKEVHKEQEIIKINSQDQFNQKPDITKEQANAHAQEIDKEINKLKKD
                     NFTLNIKTQTKQERQKKFQDYDIFYDVYTSKDNNIESINKELANDGFKVKNGIATVPA
                     DFFDQCFKKGIYVLIPRLLSLGKDKELHFDPVPLEDKGFVLTDFRKGRKEKTIDITFQ
                     RSIAKIQNPNLILQSPKEFLEALNEDRKFTQNDKEEQAQAIQEACQKKADEMEKILIK
                     DNKRLKDIITDEKKLNEKINRLKKNQNKSTKELSLQGRLEFLRNNRQKARKHKEIIEN
                     SQNPQTQANDGKQNNTSGDDFLDDEKSDTTTQDKPNNKNINSKDIGDAGEYAASMLFT
                     KRSTRYLSNRRKLDANFNTKGFNHTIPDFLVSLNDYPTLVEVKNVQDQALTEQISFEL
                     KLAREYELDYLFLCNHYTKLID"
BASE COUNT          753 a          220 c          226 g          429 t
ORIGIN      
        1 cctttagatg atgcacgagg atctagaaat aaaaaacttt taaaagatgc aggagcaatg
       61 acttcagaac aaatcagaaa aaaatataat ttaccagcat atgattcttc tcattgcgaa
      121 attgatggag aaactgattt tgacttatta ggcaaatatc atgatgaata ctccaagctt
      181 ttaaacgatg ctataaaaaa ggctaaagaa aatgaatgaa aatataaaaa ttgactttgc
      241 tcaagttaat tttcatatta aagaatttca aaaggtttat atactagaaa attgtaaatt
      301 gtatttttat aagccttatc atttaaaaac acaagataaa gaaaaaggga gagaatttaa
      361 aaaccaagat aaagataata aagaagttca taaagaacaa gaaatcataa aaataaattc
      421 tcaagatcaa ttcaatcaaa aacccgatat cacaaaagaa caagcaaatg cccatgctca
      481 agaaatcgat aaagaaataa acaagcttaa aaaagataat ttcactttaa acataaaaac
      541 acaaaccaaa caagaacgac aaaagaaatt tcaagattat gatatatttt atgatgttta
      601 tacaagcaaa gataataata tcgaaagtat aaataaagaa ttagctaatg atggctttaa
      661 ggttaaaaac ggtatagcta cagtcccagc agattttttt gatcaatgtt ttaaaaaagg
      721 aatttatgtt ttaataccaa gattgctatc tttaggaaaa gataaagaac tacactttga
      781 tcctgtacct ttagaagata agggctttgt gcttactgat tttagaaaag gaagaaaaga
      841 aaaaactata gatataactt ttcaaagaag catagctaaa atacaaaatc ctaatttaat
      901 tttacaaagt cctaaagaat tcttagaagc tttaaatgaa gatagaaagt ttacacaaaa
      961 cgataaagaa gaacaagcac aagccatcca agaagcttgc cagaaaaaag cagatgaaat
     1021 ggaaaaaata ttgattaaag ataataaaag attaaaagat atcattacag atgaaaaaaa
     1081 attgaatgaa aaaatcaata ggttgaaaaa aaatcaaaac aaatcaacaa aagaactaag
     1141 cctacaaggc cgacttgaat ttttaagaaa taacagacaa aaagctagaa agcataaaga
     1201 aatcatcgaa aattcccaaa accctcaaac acaagctaat gatggtaaac aaaataacac
     1261 tagtggagat gatttcttag atgatgaaaa aagtgatacc accacccaag acaaaccaaa
     1321 caacaaaaat ataaactcta aagacatagg agatgcagga gaatatgctg cttctatgct
     1381 ttttactaaa agatctacta gatatttatc caatagaaga aaactagatg ctaattttaa
     1441 taccaaaggt tttaatcaca ctatacctga ttttttagta agcttaaatg attatcctac
     1501 cttagtagaa gttaaaaatg tccaagatca agccttaact gaacaaataa gctttgaatt
     1561 aaaacttgct agagaatatg agcttgatta tttattttta tgcaatcatt acactaaatt
     1621 aatagaca
//
LOCUS       DAPWAA010000130         1625 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.131, whole genome shotgun sequence.
ACCESSION   DAPWAA010000130 DAPWAA010000000
VERSION     DAPWAA010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.131"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..213)
                     /locus_tag="RTF91_001753"
     CDS             complement(<1..213)
                     /locus_tag="RTF91_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDZ4944600.1"
                     /translation="MGFRINTNIGALNAHANSVVNAGELDKSLSRLSSGLRINSAADD
                     ASGMAIADSLRSQAATLGQAINNGNDA"
     gene            complement(358..>1625)
                     /locus_tag="RTF91_001754"
     CDS             complement(358..>1625)
                     /locus_tag="RTF91_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDZ4944601.1"
                     /translation="SSNQSIKATIGATQSSKIGLTRFETGARITSSGEVQLTLKNYNG
                     IDDFKFQKVVISTSVGTGLGALADEINKNADQTGVRATFTVETKGMSAVRAGTTSDDF
                     SINGVMIGAVDYKDGDGNGALVSAINSVKDTTGVEASIDSNGKLLLASREGRGIEITG
                     DIGRGAFINPDMKTNYGRLSLVKNDGKDILLSGTGLNSIGFDTGQFISQASVSLRESK
                     GQIDANIADAMGFGSANKSLILGGFSSVSAYMSSSGSGFSSGSGFSVGSGKNYSTGFA
                     DTVVVSAASQLSAVYNVSSGSGFSSGTGLSQFATMKATAFGVKDETAGVTTLKGAMAV
                     MDIAESAISNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDFASESANY
                     SKANILAQSGSYAMAQANSVQQNVLRLLQ"
BASE COUNT          524 a          335 c          245 g          521 t
ORIGIN      
        1 ggcatcatta ccattattta tagcttggcc taaagtagcc gcttgtgaac gcaaagaatc
       61 tgctatagcc atccctgaag catcatctgc tgcggagttg attctaagac ctgaactaag
      121 tctacttaaa gacttatcaa gctctccagc attaacaact gaatttgcat gtgcatttaa
      181 tgcaccgatg ttggtattta tcctaaaacc cattttaaat cctttcaaaa tattgcatca
      241 agaaaggaaa agcaaaaagt gttccaactt ttagttataa aaattatccg aaataaaaaa
      301 agcctagtat ttctactagg cttggatttg tatatactgc ggttttatta attaaaacta
      361 ctgtaacaac ctcaaaacat tttgttgcac agaattagct tgtgccatag cataagaacc
      421 tgactgtgca agtatgttag cttttgagta gtttgcactc tcgcttgcaa agtctacatc
      481 acggatttgt gattcggctg ctttgacatt tacttgagta acagtaatat tgtttatagt
      541 tgatgtaact tgattttgta ctgaacctat atcagctcta atttgatcaa gatttgatat
      601 agcagattca gctatatcca tcacagccat agcaccttta agtgtagtta cacccgctgt
      661 ttcgtctttc actccaaaag ctgttgcttt catagttgca aattgtgata aacctgtacc
      721 actagaaaat cctgaacctg aagaaacatt atacactgca gaaagttgag aagcagctga
      781 aacaactaca gtatctgcaa aacctgtaga ataattttta ccactaccta cagaaaatcc
      841 tgaacctgaa gaaaatccac tgcctgaact actcatataa gctgaaacag aagaaaatcc
      901 acctaatata agtgatttgt ttgcagaacc aaatcccata gcatcagcga tattagcatc
      961 gatttgtcct tttgattctc ttaaagaaac agaagcttga gagataaatt gacctgtatc
     1021 aaacccgata gagttaagac ctgtaccact taataaaata tctttaccat catttttaac
     1081 caaagataag cgaccatagt ttgttttcat atccggatta ataaaagcac ctctaccgat
     1141 atctcctgtg atttcaatcc ctctaccttc tcttgaagca agtaaaagtt ttccattaga
     1201 atcaattgaa gcttcaactc cggttgtatc tttaactgag ttaattgcag aaaccaaagc
     1261 tccattacca tcgccatctt tgtaatctac tgcaccgatc ataactccat taatactaaa
     1321 atcatctgaa gtagtcccag ctctaactgc tgacatacct ttagtctcta ctgtaaaagt
     1381 agctctaact ccggtttgat ctgcattttt attaatctca tcagctaaag ctccaagtcc
     1441 tgttccaact gaagttgaaa tcacaacttt ttggaattta aaatcatcta taccattgta
     1501 atttttaaga gtaagttgca cttcaccact agatgtaatt cttgctcctg tttcaaaacg
     1561 tgttaaacct atcttagaag attgagttgc tcctatagta gcttttatgc tttgatttga
     1621 actag
//
LOCUS       DAPWAA010000131         1550 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.132, whole genome shotgun sequence.
ACCESSION   DAPWAA010000131 DAPWAA010000000
VERSION     DAPWAA010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.132"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..191)
                     /locus_tag="RTF91_001755"
     CDS             complement(<1..191)
                     /locus_tag="RTF91_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HDZ4944602.1"
                     /translation="MFKFFEIKIKGFKNANARSDLKTKDIAKELGINPDTFNSMKFRN
                     SIPYPQILNFLQERNISIN"
     gene            270..1286
                     /locus_tag="RTF91_001756"
                     /pseudo
     CDS             270..1286
                     /locus_tag="RTF91_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862736.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SIR2 family protein"
BASE COUNT          642 a          160 c          180 g          568 t
ORIGIN      
        1 taatttatac ttatatttct ttcttgtaag aagtttagta tttgtggata aggaatggag
       61 tttctaaatt tcatagaatt aaaagtatca ggattgattc ctaattcttt ggctatatct
      121 tttgttttta aatcacttct tgcatttgca tttttaaatc ctttgatttt aatttcaaag
      181 aatttaaaca caaaatatta aaaagcaaag aaaagatttt attttgaaag gttaaaaata
      241 ttatataatt ttttaaaaaa aggattttta tgagcagtag tgatattttc ttttttggtg
      301 caggtttttc gaaatcttta aatgattctt atccaaccct tgccgagcta tcagaatatt
      361 ttttaaataa taaatttata aaaaaacatg aagaaattta taaagataat ttagaacaac
      421 ttttaactta tcttataaca cctttaccat ttaaaacaaa agaagatatt ttaagagatg
      481 aggcttctta tattgaaaaa ataaaaaaaa ttggagagta ttttttaaat ttaaaaaata
      541 aagaaatcac cgatctaaat aacaatataa gaattttatc acaatttata aatcgcaata
      601 aatgcacttg tataacacta aattatgatt tattacttga agaaatgtta ttttcgacat
      661 taaatagaga agtatctgaa aataatgttt ataatatatt ttataaaatg cctataaagt
      721 atattgatga aagaacagaa agagaacaac aaggttttaa tttttataaa agtaatcttg
      781 gttatggcaa aaagaactca actgaaatta taaaacttca cggctcaatt aattggtatt
      841 gcgatcaaat ttattaaaat agtccaatat atttttatag tcataaagca actaaacaat
      901 ttgaagaata tcaagaaaat ataggaaaag aaagtttacg acagcttatt atccctccta
      961 tacttgataa aacaagcaat tataatcata ttgaaataca atctctatgg aagaaagctt
     1021 ttaaatctat acaaaaagct aaaaatattt atatttatgg cttttctttt cctctaacag
     1081 acttatctgt cgtttatctt tttaaaagtg ctttgcatct aaataaacaa gattataaaa
     1141 tatatgttat taatactgag agtaatattg aagataaaat gaaaagatat aatgaaattt
     1201 ttggaaaaaa caaatgcgat tttagttttt gtaataaaaa taatttaata agattagctg
     1261 atcatttaaa cgaaaaaatt aattaatatt taagttttct atgcaactat cttccaaacc
     1321 ttaaagttat agatagttac atactatttt tatataaaaa gtggttaaat tatgattata
     1381 tagtgtttta taaggatagt tacacaaata ataaaatata agtttatttt aagtaaaaat
     1441 gtaactatct tagaaagtaa aaacactttt aggatataaa atttaaaatc aaacctcgct
     1501 tttatctgcc ttttaaacag catttaatca ctatcttggg ataaaacgga
//
LOCUS       DAPWAA010000132         1296 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.133, whole genome shotgun sequence.
ACCESSION   DAPWAA010000132 DAPWAA010000000
VERSION     DAPWAA010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.133"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..>1296)
                     /locus_tag="RTF91_001757"
     CDS             complement(<1..>1296)
                     /locus_tag="RTF91_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944603.1"
                     /translation="EFFLKNTQALFEVDEFLAYKLRSLKGLSFTLIQDKNGINFKKDK
                     ILLYQNPNQEFLENLALFQDKYEKYPVLFFYGFGNGMFYKDLCKNKKHKHIIIFEDNL
                     EILALAFHLFDFSEELKKEQLILFYTPNLNAAQLTTLFNYEIIQKSIKIFNLFIHSDF
                     YQKFYSNQIQNVNTQLIEMIRFIVLNKGNDPHDSLVGIKHTLDNLPKMLNHGIFQEFL
                     KERKAKVKNAIIVSTGPSLTKQLALLKKYANKATIFCADSAYVILNKYSIKPDYVCML
                     ERDDIVSKCFDNDFGEFNKGILFILASVVHKEVLDFLEKDQRAYMLVHRPLNFAASLK
                     LNEYGYLGVGHSVSNMIYELAGALRFENIIFIGQDLAYGEDGSSHPKEHIYGSQGEEI
                     RGEKYTLAYGGKGKVRTQLTWNLFRQAFEKDIFWTKEKL"
BASE COUNT          441 a          193 c          171 g          491 t
ORIGIN      
        1 tgagcttttc ttttgtccaa aatatatctt tttcaaaagc ttgacgaaat aaattccacg
       61 tgagttgagt tcttactttg cctttcccac cataagctaa ggtgtatttt tcccctctga
      121 tttcttcgcc ttgacttcca tatatatgct ctttagggtg cgaacttcca tcttcaccat
      181 aagctaaatc ctgtcctatg aaaatgatat tttcaaatct taaagctcct gctagttcat
      241 agatcatatt agaaacacta tgtcctactc caagatatcc atattcatta agttttaaac
      301 tggctgcaaa atttaaaggg cgatgtacaa gcatataagc tctttgatct ttttctaaaa
      361 aatctaatac ttctttatga accacagaag caagtataaa aagaatacct ttgttaaatt
      421 ccccaaaatc attatcaaaa catttagaaa ctatatcatc acgttctagc atacacacat
      481 aatcaggttt tatgctatat ttattaagaa tgacataagc actatccgca caaaaaatag
      541 ttgctttatt agcatacttt tttaataaag ctaattgttt agttaaacta ggtcctgttg
      601 aaacaatgat ggcgtttttg actttagctt ttctttcctt gagaaattct tgaaaaattc
      661 catgatttaa cattttagga agattgtcta aggtatgctt gattcctact aaagaatcat
      721 gcggatcatt gcctttgttt aaaacgataa atcgtatcat ttctataagt tgagtgttta
      781 cattttgtat ttgattgctg taaaattttt gataaaaatc actatggata aaaagattaa
      841 aaatttttat acttttttga atgatttcat agttaaaaag agtagtaagt tgtgctgcat
      901 tgagatttgg agtataaaaa agtattagtt gttctttttt taattcttcg ctaaaatcaa
      961 acaaatggaa agctaaggct aaaatttcaa gattatcttc aaaaatgata atgtgtttat
     1021 gttttttatt tttacataga tctttgtaaa acattccatt tccaaaacca taaaaaaata
     1081 aaacgggata tttttcatat ttgtcttgaa aaagagcaag attttctaaa aattcttgat
     1141 tgggattttg ataaagtaag attttatctt ttttaaaatt tatcccattt ttatcttgga
     1201 taagtgtaaa gcttaagcct ttaagtgatc ttaatttata agctaaaaac tcatcaactt
     1261 caaataaagc ttgagtgttt tttaaaaaaa attctt
//
LOCUS       DAPWAA010000133         1292 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.134, whole genome shotgun sequence.
ACCESSION   DAPWAA010000133 DAPWAA010000000
VERSION     DAPWAA010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.134"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..283)
                     /locus_tag="RTF91_001758"
     CDS             complement(<1..283)
                     /locus_tag="RTF91_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944604.1"
                     /translation="MLEDDFLKERQNIRQKMLKFSRAINQGKPLDDDLREEISSDDIL
                     RRRFRKKAANKFLEELDEEYELKHTKKSNIYLKEDLINVKLEEKQSLAKK"
     gene            complement(284..1213)
                     /gene="rsmH"
                     /locus_tag="RTF91_001759"
     CDS             complement(284..1213)
                     /gene="rsmH"
                     /locus_tag="RTF91_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDZ4944605.1"
                     /translation="MKIPHIPVLLNEVQEIFKNLKTGYFLDCTLGFGGHSEALLKNHP
                     NLKFIACDQDQQALEFSKKRLEHFHDRITFIQSNFGEILEKISHKEDLRGILADIGVS
                     SFQLDNNERGFSLNSDFLDMRMNQNSKISAYEIINTYTKEQLTSIFKEYGELHDAHFI
                     AEKICLARNKNPIKSAKELCQIIGKSKQNHRKISKATLVFQAIRIEVNQELKVLKDFF
                     KYLENLKPKNCILAIINFHSLEDRIVKNFFKKWAKNCICDEKIMRCECGNNHSLGQII
                     TKKAISASKEELLKNSRSSCAKMRAFYFNNIGQ"
BASE COUNT          409 a          191 c          165 g          527 t
ORIGIN      
        1 tttttttagc aagagattgt ttttcttcta atttaacatt tatcaaatct tcttttaaat
       61 atatatttga ctttttagta tgctttaact catactcttc atcaagttct tctaagaatt
      121 tattagcagc cttttttcta aagcgacgcc ttaaaatatc atcactagaa atttcctccc
      181 ttaaatcatc atcaagtggt ttgccttgat ttatagcacg agaaaatttc aacatttttt
      241 ggcgtatgtt ttgtcgttct tttaggaaat catcttctag catttattgt ccaatattgt
      301 taaaataaaa agcacgcatt ttagcgcaac ttgaacgaga attttttaaa agctcttctt
      361 tgcttgcact tatagctttt ttggttatta tttgccctag actgtggtta tttccacatt
      421 cgcaacgcat tattttttca tcgcaaatgc agttttttgc ccattttttg aaaaaatttt
      481 ttactattct atcttctaaa gaatgaaagt taatgatcgc taaaatacaa tttttcggtt
      541 ttaaattttc taaatactta aaaaaatctt tgagcacttt aagttcttgg tttacttcta
      601 ttctaatagc ttgaaatact aaagtagctt tggaaatttt tctatgattt tgtttgcttt
      661 ttcctataat ttgacaaagt tctttagcac ttttaatcgg atttttattt cttgctaagc
      721 aaattttttc agcaataaaa tgtgcatcgt gtaattctcc atattcttta aaaatggaag
      781 ttaattgttc ttttgtgtag gtgttgataa tctcataggc tgatatttta gagttttgat
      841 tcattctcat atccaaaaag tcagaattta aactaaaacc tctttcgttg ttatcaagtt
      901 gaaatgaaga aactccaatg tctgctaaaa tacctcttaa atcttcttta tgtgaaattt
      961 tttctaaaat ttcaccaaaa ttgctttgta taaaagtaat tctatcgtga aagtgttcaa
     1021 ggcgtttttt agaaaattct aaagcttgtt gatcttgatc gcaagcaatg aatttaagat
     1081 tagggtggtt tttaagtaaa gcttcactat gtccgccaaa tcctaaggtg caatctaaaa
     1141 aataacctgt tttaagattt ttaaaaatct cttgaacttc attaagcaaa actgggatat
     1201 gaggaatttt caaaatgtca atcctaataa aatttttata aactataatt ataactaaaa
     1261 ttttattgta agaatcataa aatttaaaga ac
//
LOCUS       DAPWAA010000134         1234 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.135, whole genome shotgun sequence.
ACCESSION   DAPWAA010000134 DAPWAA010000000
VERSION     DAPWAA010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.135"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..1231
                     /locus_tag="RTF91_001760"
     CDS             <1..1231
                     /locus_tag="RTF91_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HDZ4944606.1"
                     /translation="LLSNSIYLSFFENFENIFTQTISPFLAIWGLVLLLKSKNSKQYF
                     WIGFFVGILWFWWLGLSSIYFNLNYLVPIIPIIVGFIYGLLFRLCYVLKFDFLRLCGI
                     FCISFIHPLGFDWLNWGVFTVYGFFDPSYRGIICIFLIAYFIYEGYISRYYKIAIVLI
                     LFFSGFQYDEKQAKTLDLNYKLVNTNISQDQKFLQENLKSNSDALIQNIIQAINEKKE
                     LIILPETAFAFNLKNTKYELMLKELSYKITIITGAFNIEKEHTYNSTYIFKKGNVYIL
                     NKHFLVPFGEEIPFFKDLIKKYFLKNIEEFSKGPVQSKYKLNNQIITNAICYEVTKEQ
                     NYQNSQIIIALSNNAWFNHSSEYKLQQLLIKFYASKYGVSVYHATNGKENIVILPKKA
                     LSKDWKNLFNRIFSTKN"
BASE COUNT          452 a          161 c          155 g          466 t
ORIGIN      
        1 tttactttca aattctattt atttatcatt ttttgaaaat tttgaaaata tttttacaca
       61 aactattagc ccatttttag ctatttgggg cttggtttta ctcttaaaaa gtaaaaattc
      121 taaacaatat ttttggatag gtttttttgt aggaatcctt tggttttggt ggcttggctt
      181 atcttcaatt tattttaacc taaactattt agtaccaatc ataccaatca ttgttggttt
      241 tatttatgga ctacttttta gattatgtta tgtgttaaaa ttcgattttt taagactttg
      301 tggaattttt tgtataagtt ttattcatcc attaggcttt gattggctta attggggagt
      361 ttttacagtt tatggttttt ttgatcctag ttatcgtggt attatttgta tatttttaat
      421 agcgtatttt atctatgaag gctatatatc aagatattat aaaatagcaa ttgttcttat
      481 tttattcttc agcggatttc aatatgatga aaaacaagct aaaacccttg atttaaacta
      541 caaacttgtt aacacaaata tctctcaaga tcaaaaattt ttacaagaga atttaaaatc
      601 aaattctgat gccttaattc aaaatataat tcaagccata aatgaaaaaa aagagcttat
      661 aatcttacct gaaactgctt ttgcttttaa tttaaaaaac accaaatatg aacttatgct
      721 caaggaatta tcctacaaaa ttaccattat cacaggagca tttaatatcg aaaaagagca
      781 tacttacaac agtacttaca tctttaaaaa aggtaatgtt tatattttaa ataagcattt
      841 tttagttccc tttggtgaag aaattccatt tttcaaagat ttgataaaaa aatattttct
      901 taaaaatatt gaagaatttt ctaaaggtcc ggtgcaaagc aaatataaac taaataatca
      961 aattatcaca aatgcaattt gctatgaagt taccaaagaa caaaattacc aaaattcaca
     1021 aattattata gccttaagta ataatgcttg gtttaatcac agcagtgaat acaaactcca
     1081 gcaactcttg atcaaatttt atgcaagcaa atatggagtt agcgtttatc atgccacaaa
     1141 tggtaaagaa aatatagtta tactccctaa gaaagctcta agtaaagatt ggaaaaattt
     1201 atttaacaga atatttagta ctaaaaatta aaaa
//
LOCUS       DAPWAA010000135         1223 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.136, whole genome shotgun sequence.
ACCESSION   DAPWAA010000135 DAPWAA010000000
VERSION     DAPWAA010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.136"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..787
                     /locus_tag="RTF91_001761"
     CDS             <1..787
                     /locus_tag="RTF91_001761"
                     /inference="COORDINATES: protein motif:HMM:NF033859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SMEK domain-containing protein"
                     /protein_id="HDZ4944607.1"
                     /translation="LYNINKQCKNAEAIDLIDNENRIAIQITSNTSTKKIKNTIDKFK
                     KTKFSNYEFYMFYLTDDLPNNTKKNISQNNIKSLCFLDLIQELHFNSLKAKKFITEIT
                     EKTIIEKFKNYLKYPNQWSFNYKLNIYYNNINPNFRLKLSECNEENEQYSWLCEIKAI
                     SKRYQNTKLHYDCIKLFYNDIDLNIQTFSIQFYQEGLTITAPQPLYINDERLDIDSLL
                     TYFFNHNANKISYGKFVKTRKNLIYKKCFETWIPLIFLKIIMS"
BASE COUNT          569 a          113 c          133 g          408 t
ORIGIN      
        1 actttataat ataaataaac aatgtaaaaa tgccgaagct attgatttaa ttgataacga
       61 aaatcgcatt gctattcaaa ttacatccaa tactagcacc aaaaaaatca aaaacactat
      121 tgataaattt aaaaaaacaa aattttcaaa ctatgagttt tatatgtttt atttaactga
      181 tgatttaccc aataatacaa agaaaaatat atctcaaaat aatataaaaa gtctttgttt
      241 tttagattta attcaagaat tgcactttaa ctccttaaaa gcaaaaaaat ttatcacaga
      301 aattacagaa aagactatta tagaaaaatt taaaaattat ctaaaatatc caaatcaatg
      361 gagttttaat tataaattaa atatatatta caacaatata aatccaaatt ttagattaaa
      421 gcttagtgaa tgcaatgaag aaaatgaaca atacagctgg ctatgtgaaa ttaaggctat
      481 aagcaaaaga tatcaaaata ccaaattgca ttatgattgt attaaattgt tttataatga
      541 tattgatttg aatatacaaa cattttctat acaattttat caagaaggat taactattac
      601 tgcaccacaa cctttatata ttaatgatga aagactagat atagattcac ttctaactta
      661 tttttttaac cataatgcaa ataaaatttc atatggtaaa tttgtaaaaa caagaaaaaa
      721 tttaatatac aaaaaatgtt ttgagacatg gataccttta atttttttaa agattataat
      781 gagttagaaa attttaaaaa gtttatagat aaaaggatta aagaatttga ttataaagag
      841 aataaagata gatattataa ttatggttta gattctgata ttaaagatga aagatctcat
      901 agaaattgct gttttaatta ttggatttat gacttatatt gggataaatt taaaagtaag
      961 gacaaaaaaa tatgatacaa attcaaaaga ataaaaatga attctaaaat tttaacccta
     1021 tcaaaagata aaattaacaa tgttaaaaaa agttagctga aattatagat tattcttatg
     1081 caaatcacat aaaagaaata gatgaagagt atataaatga ttttgttatt aatgataaag
     1141 aatatataga aaaacatcaa aatttattta tcataagcaa taaagaagat aaacttttgg
     1201 atttagaaat aaatttagaa aaa
//
LOCUS       DAPWAA010000136         1164 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.137, whole genome shotgun sequence.
ACCESSION   DAPWAA010000136 DAPWAA010000000
VERSION     DAPWAA010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.137"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..1092)
                     /locus_tag="RTF91_001762"
     CDS             complement(<1..1092)
                     /locus_tag="RTF91_001762"
                     /inference="COORDINATES: protein motif:HMM:NF014763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HDZ4944608.1"
                     /translation="MFRNFQLGTKIIFVVLSSVFVVILALATLISFRSYDTLHHEASL
                     IVANVNARGANKIQGYVNQATSTMSFVVSRVESTLGRVALNEDQMKDIIESLSSNSNF
                     IEYAYIIGINSQAFIAQNGKSFTIDSKLKSDLLANTSPSANGKVGISKPIKLQIQNKD
                     FTTLNLTIDIFNPAKQKVATLGILYNLAYLGRDLISGRYSLFKGDSRFLMTQDGYIVI
                     DPNKEFIGKNIKEVNTDPSVQKVVTNSMNKTREVFDYKFLGNDYTAHIQPFEIVDSDA
                     ILTMVSIAPDEVVYESFYNLLYTIIICSVVGMIIIALIVFLYVKFFITQNIDNILKHL
                     LSFFDYINFKTTFPPKDLKTNNNDEIAQMI"
BASE COUNT          398 a          185 c          184 g          397 t
ORIGIN      
        1 aatcatttga gctatttcat cattgttgtt tgtttttaaa tcctttggtg gaaaggtggt
       61 tttaaagttg atataatcaa aaaagcttaa aagatgtttg agtatattgt cgatattttg
      121 tgttataaag aatttcacat ataaaaaaac tataagagcg atgataatca tacccacaac
      181 agaacaaata atgatagtat aaagcaagtt gtaaaaagac tcataaacga cttcatcagg
      241 agctatggaa accatcgtca aaatagcatc actatctaca atctcaaaag gctgtatgtg
      301 tgctgtataa tcattcccaa ggaatttata atcaaaaact tctcttgttt tattcataga
      361 atttgtgacg actttttgaa cacttgggtc ggtgttgact tcttttatat ttttaccgat
      421 aaattctttg ttaggatcaa taacaatgta accatcttga gtcattaaaa accggctatc
      481 tcctttaaaa agactgtatc ttccgctaat cagatctctt cccaagtagg ctaaattgta
      541 caaaattcct agagtggcaa ctttttgctt agcaggatta aatatatcga tggtcaaatt
      601 aagtgttgta aaatctttgt tttgaatttg gagcttaata ggttttgata tgcctacttt
      661 accatttgca ctagggctag tgttagctaa caagtctgat tttaacttgc tatctattgt
      721 aaaactttta ccattttgtg caatgaaagc ttgggaattt attcctatga tataagcgta
      781 ttctataaaa ttagaattgc ttgacaaact ttctataata tccttcatct gatcttcgtt
      841 aagagcaaca cgtccaagag tggattcgac cctactaaca acaaaactca tagtggaagt
      901 agcttgattg acatagcctt gaattttatt agcgcctcga gcgttgacgt ttgcgactat
      961 taaacttgct tcgtggtgta aagtatcata acttcgaaaa gaaatcaaag ttgctagagc
     1021 caagattaca acaaaaacag acgacaaaac aacgaaaata atcttcgttc ctagttggaa
     1081 gtttctaaac attcaataaa ccttttttct ttgtaatttt tgaattttga attcaagctg
     1141 atattatcaa aaaaaaaaaa aaac
//
LOCUS       DAPWAA010000137         1139 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.138, whole genome shotgun sequence.
ACCESSION   DAPWAA010000137 DAPWAA010000000
VERSION     DAPWAA010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.138"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            93..518
                     /locus_tag="RTF91_001763"
     CDS             93..518
                     /locus_tag="RTF91_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HDZ4944609.1"
                     /translation="MFEDMHPSMILATIAIFLAMVVILNSMLYKPLLKFMDERNDSIK
                     NDENKVKENSQEVLGVNDELETIHINTRKEIQKIKQSAIASAKEEAEQILRSKKEELE
                     RSMASFYADLAVQKQELQEHLKMHLPEFKQALQNNIKKI"
     gene            533..1036
                     /locus_tag="RTF91_001764"
     CDS             533..1036
                     /locus_tag="RTF91_001764"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDZ4944610.1"
                     /translation="MSKLFFILPLYAFGASNGSGEYDIIPRTINFLIFVAILYYFIAT
                     PFKNFYKNRIVKISSKLDEIQKKLLESKAKKLDTMKKLEEAKASATAALVIAKKEAEI
                     LVQNIKKETQDELDLLQKHFEEQKDYEFRKMEKELVSDTLNEIFADPNTTLKQSEIIE
                     LMMKKVS"
     gene            1039..>1139
                     /locus_tag="RTF91_001765"
     CDS             1039..>1139
                     /locus_tag="RTF91_001765"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343564.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. The delta subunit is part of
                     the catalytic core of the ATP synthase complex; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit delta"
                     /protein_id="HDZ4944611.1"
                     /translation="MKNIIARRYAKAIASRADINDFYQNLCILNSAFV"
BASE COUNT          469 a          121 c          191 g          358 t
ORIGIN      
        1 aaaactaatc aaaatgctcg aaaagcttta accaaaatct tagtttttta tggtaaaata
       61 gcccttagaa aattctaaaa aggggaaatg ttatgtttga agatatgcat ccttctatga
      121 tacttgctac catagctatt tttttagcta tggtagttat tttaaacagt atgctatata
      181 agccactttt gaaatttatg gatgaaagaa atgattctat aaaaaatgat gagaataagg
      241 taaaagaaaa ttctcaagaa gttttaggtg taaatgatga gttagaaaca attcatatta
      301 acactagaaa agaaattcaa aaaattaaac aaagtgctat agctagtgct aaagaagagg
      361 cggagcaaat tcttagaagt aaaaaagaag aattagaaag aagtatggcc agtttttatg
      421 cagatttagc tgttcaaaaa caagaattac aagaacattt aaaaatgcat ttacctgagt
      481 ttaagcaagc tttgcaaaat aacataaaga aaatttaata gggggggggg agttgagtaa
      541 gttatttttt attctaccct tatatgcttt tggtgcatca aatggtagcg gagaatatga
      601 tattattcca aggactatta attttctaat ttttgtggct atattgtatt attttattgc
      661 aactccattt aaaaattttt acaaaaatcg tattgtaaaa atttcttcta agcttgatga
      721 aattcaaaaa aaacttttag aaagtaaagc taagaaatta gatacaatga aaaaacttga
      781 agaagccaaa gcaagtgcta ctgctgcttt agttatagca aaaaaagaag ctgaaatttt
      841 agttcaaaat attaagaaag aaactcaaga tgagttggat ttacttcaaa aacattttga
      901 agagcaaaaa gattatgaat ttagaaaaat ggaaaaagaa ttagtatcgg atactttaaa
      961 tgaaattttt gccgatccaa atacgacatt aaaacagagt gaaataatag aacttatgat
     1021 gaagaaggtg tcttaaatat gaaaaatata attgcaagaa gatatgcaaa agcaatagct
     1081 tcaagagccg atataaatga tttttatcag aatttgtgta ttttaaattc tgcttttgt
//
LOCUS       DAPWAA010000138         1110 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.139, whole genome shotgun sequence.
ACCESSION   DAPWAA010000138 DAPWAA010000000
VERSION     DAPWAA010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1110)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.139"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..510
                     /locus_tag="RTF91_001766"
     CDS             <1..510
                     /locus_tag="RTF91_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HDZ4944612.1"
                     /translation="IFHKKHSLFYNFTLPFKNPHKEGILKLVLYKDGNYEFQQSTLKQ
                     NLNNILLLSDEKIHSKSDNLYHKSSLRTFYNKHAYKWQQNLCYDIAFFNEKDELCEGS
                     RTNLILEKNTQFYTPKIQSGMLNGVYRNFLIDLNLIKEKTLSKQDLIEAENIYCINSV
                     RGLKKVKLQ"
     gene            507..1073
                     /locus_tag="RTF91_001767"
     CDS             507..1073
                     /locus_tag="RTF91_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDZ4944613.1"
                     /translation="MKKILFIDNYDSFSYTIVYYLKELGFECKVIKNDTFKKAKELEK
                     FDFTHLIISPGPHSPKESKLSLKAIKYFTKNKRILGICLGHQCIAEIFGGTISKMQNP
                     MHGKTSKLYFKKDPIFKGIKKEIKICLYHSLYISSMPKKCKILAHNSENIIMAIKHKK
                     YPIYGLQFHPEAVLTQKGKKILKNFMKT"
BASE COUNT          446 a          154 c          134 g          376 t
ORIGIN      
        1 atttttcata aaaaacattc tttattttat aattttaccc taccctttaa aaatcctcac
       61 aaagaaggga ttttaaaact tgttttatac aaagatggaa attacgaatt tcagcaaagc
      121 accttaaagc aaaacttaaa taatattctt cttttaagcg atgaaaaaat tcactcaaaa
      181 agtgacaatc tttatcataa aagttcttta cgcacttttt acaacaaaca cgcatacaaa
      241 tggcagcaaa acttgtgcta tgatatagct ttttttaacg aaaaagatga actttgcgaa
      301 ggatcaagaa ccaatctcat cctagaaaaa aacactcaat tttatactcc aaaaattcaa
      361 agcggtatgt taaatggcgt atatagaaat ttcttgattg atcttaactt aataaaagaa
      421 aaaacattat ccaagcagga tttgatcgaa gcagaaaata tttattgtat taactctgtg
      481 cgtggtttaa aaaaggtaaa attacaatga aaaagatttt atttatcgat aattatgatt
      541 cttttagcta taccattgtt tattatctta aagagcttgg ttttgagtgt aaagtgataa
      601 aaaatgatac ttttaaaaaa gctaaagaat tagaaaaatt tgattttacc catcttatta
      661 tctctcctgg tcctcattca ccaaaagaat ccaaattaag cttaaaagca atcaaatatt
      721 ttacaaaaaa taaaagaatt ttaggcatat gcttaggaca ccaatgtata gctgaaattt
      781 ttggtggtac gatttctaaa atgcaaaatc ctatgcacgg caaaacttct aagctttact
      841 ttaaaaaaga tcctattttc aaaggtataa aaaaagaaat taaaatttgt ttataccatt
      901 ctttatatat tagttctatg cctaaaaaat gtaaaatttt agcccataat tcagaaaata
      961 ttattatggc tatcaagcat aaaaaatatc ctatttatgg attgcaattt caccctgaag
     1021 cggttttaac tcaaaagggt aaaaaaatac ttaaaaattt tatgaagact tgattaaaaa
     1081 tatttgtttt ttatattttt tagataataa
//
LOCUS       DAPWAA010000139         1107 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.140, whole genome shotgun sequence.
ACCESSION   DAPWAA010000139 DAPWAA010000000
VERSION     DAPWAA010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.140"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            2..892
                     /gene="msrP"
                     /locus_tag="RTF91_001768"
     CDS             2..892
                     /gene="msrP"
                     /locus_tag="RTF91_001768"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004275319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HDZ4944614.1"
                     /translation="MITPENLYKKRRDFLKLGAGALISSSVLASKLSALNFTSDTNPN
                     KLEISDEELATNYVNFYEFSTDKKKAVSLAQNFNTQNWKIDISGEIEKPLTLSMEDIL
                     KFPLEERIYRFRCVETWSMVVPWVGFELRRLIEMAKPTSEAKFVKFTTLLDKSQFPDQ
                     DAFFPTIDYPYVEGLRMDEAMHPLTLLAIGMYKKALKPQNGAPIRLVVPWKYGFKSIK
                     SIVKIEFIKEQPKSTWENYAPNEYGFYANVNPNVSHPRWSQANERALGQFFTKPTLMF
                     NGYEKEVASLYKNMDLKVNF"
     gene            892..>1107
                     /locus_tag="RTF91_001769"
     CDS             892..>1107
                     /locus_tag="RTF91_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase heme-binding subunit YedZ"
                     /protein_id="HDZ4944615.1"
                     /translation="MKAKYFKFLAYFSFLISLIYSFYHIIKAFDFVKEAYIYTGIFAL
                     IFLNLSLLFSLLKFKKTKNYPKILGIFA"
BASE COUNT          394 a          169 c          167 g          377 t
ORIGIN      
        1 gattataact cctgaaaact tatataaaaa aagaagagat tttttaaaac ttggagcagg
       61 tgctttgata agttcaagcg tgcttgcttc taaactttct gctttaaatt tcacaagcga
      121 taccaatcca aataaacttg aaatcagcga tgaagaatta gctacaaatt atgttaattt
      181 ttatgaattt tcaacagata aaaaaaaggc cgtgtcatta gcacaaaatt ttaacactca
      241 aaactggaaa atagatatca gtggagaaat agaaaaacct ttaactttaa gtatggaaga
      301 tattttaaaa ttccctctag aagaaagaat ttatcgtttt cgttgcgttg aaacttggtc
      361 tatggtggta ccttgggtag gttttgaatt gcgtcgttta atcgaaatgg caaagcctac
      421 aagcgaagca aaatttgtta aatttactac tcttttagat aaaagtcaat ttcccgatca
      481 agacgctttt tttccaacta tagattatcc ttatgtagaa ggacttcgca tggatgaagc
      541 tatgcatcct cttactttac ttgcaatagg aatgtataaa aaagctttaa aacctcaaaa
      601 tggtgcacct atccgccttg ttgttccatg gaaatatggc tttaaaagta tcaaatccat
      661 agttaaaata gaatttatta aagaacaacc caaatccact tgggaaaact acgctccaaa
      721 tgaatacggt ttttatgcca atgtcaatcc taatgtttct catcctagat ggtcgcaagc
      781 caatgaaaga gctttaggac aattctttac taaacctact ttaatgttta atggctacga
      841 aaaagaagtg gcaagcttat ataaaaatat ggacttgaaa gtgaattttt aatgaaggca
      901 aaatacttta aatttcttgc ttattttagc tttcttataa gtttaatcta tagcttttat
      961 catatcataa aagcctttga ttttgtgaaa gaagcttata tttacaccgg aatatttgct
     1021 ttgatctttt taaatttaag ccttttattt tctttactta aatttaaaaa aacaaaaaat
     1081 tatcctaaaa ttttaggtat ttttgca
//
LOCUS       DAPWAA010000140         1077 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.141, whole genome shotgun sequence.
ACCESSION   DAPWAA010000140 DAPWAA010000000
VERSION     DAPWAA010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.141"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            80..841
                     /locus_tag="RTF91_001770"
     CDS             80..841
                     /locus_tag="RTF91_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HDZ4944616.1"
                     /translation="MRFDFFVSKRLNISRNKALELIENEEVLLNGKSFKASFDVKNLL
                     ENLLKKQDLNSEEIYLSKELNLELLSEIYISRAALKLKNFLEENNIEVNNKNCLDIGS
                     STGGFVQILLENKALKITALDVGSNQLHSSLRTNEKIILYENTDLRVFKSEEKFEFIT
                     CDVSFISLVNLLYYINNLALREIILLFKPQFEVGKNVKRDKKGVLKDDKVILKAKMDF
                     EKECAKLGWILKNTQKSCIKGKEGNVEYFYYYIKN"
     gene            807..>1077
                     /locus_tag="RTF91_001771"
     CDS             807..>1077
                     /locus_tag="RTF91_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDZ4944617.1"
                     /translation="MLNIFTTISKINVTSLAIGCFDGMHLGHLKLIKCLDENGVLLVI
                     NKFKGQFLCSNHQKEEISGKKVIEVDFESIKSLDGKDFLNFLKKEF"
BASE COUNT          433 a           86 c          185 g          373 t
ORIGIN      
        1 aaaatgcttt tgaaataggt atttggtggt tttctaaaga aaaagaagac ttggaaaaaa
       61 gaataaacga gagtttaaaa tgagatttga tttttttgtt tcaaagcgtt taaatatcag
      121 cagaaataaa gctttagagc ttatagaaaa tgaagaagtt ttgctcaatg gtaaaagttt
      181 taaagcttct tttgatgtga aaaatctttt agaaaattta ttaaaaaaac aagatttaaa
      241 ttcagaggaa atttatctat ctaaagagtt aaatttagag cttttaagtg aaatttatat
      301 ttcaagagcg gctttgaaat taaaaaattt cttagaggaa aataatattg aagtcaataa
      361 taaaaactgt cttgatatag gatctagcac gggtggattt gtacaaattt tacttgaaaa
      421 taaggcttta aaaatcactg ctcttgatgt aggcagcaat caactacact caagtttaag
      481 aacaaatgaa aaaataatct tgtatgaaaa tacagattta agagtcttta aaagtgaaga
      541 aaaatttgaa tttatcactt gtgatgtgag ttttatttct cttgttaatc tgctttatta
      601 tattaataat ttggctttaa gggaaattat tttgcttttt aaacctcagt ttgaggtagg
      661 aaaaaatgtc aaaagagata aaaaaggtgt tttaaaagat gataaggtga ttttaaaggc
      721 aaaaatggat tttgaaaaag aatgtgctaa attaggttgg attttaaaaa acacgcaaaa
      781 atcatgcatt aaaggaaagg aaggtaatgt tgaatatttt tactactata tcaaaaatta
      841 atgttacttc tttggctata ggttgctttg atggtatgca tttaggacat ttaaaactta
      901 taaaatgttt agatgagaat ggagttttgt tagtaattaa taaattcaaa ggtcaatttc
      961 tttgttcaaa tcatcaaaaa gaagaaattt caggaaaaaa agttatagaa gtggattttg
     1021 aaagtataaa atctttagat ggtaaagatt ttttaaactt tttaaaaaaa gaattta
//
LOCUS       DAPWAA010000141         1004 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.142, whole genome shotgun sequence.
ACCESSION   DAPWAA010000141 DAPWAA010000000
VERSION     DAPWAA010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.142"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..143
                     /locus_tag="RTF91_001772"
     CDS             <1..143
                     /locus_tag="RTF91_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944618.1"
                     /translation="KILNAKNLEELLNILTALNEDKMIKVYEDSYLKEKFPNVMVDKF
                     LK"
     gene            159..>1004
                     /locus_tag="RTF91_001773"
     CDS             159..>1004
                     /locus_tag="RTF91_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDZ4944619.1"
                     /translation="MMSNLAPQNDVLNLTPSKTSTTNSFSKTSKNKEYEGSDSKNSTQ
                     DDTESFLNSLLHAIDETNEFLPDHMKISQKEVVDEAINRLQKGVFDESDKISIFESAS
                     FMQILSLLDKLKTDTVDVKLANLSTQLSSLIKTEANFNALKGASNLSELLDIAKDLGL
                     NVKNIKVDRLLDLKVTFPNLDKANFFKGAVDNVFKEIINNKISNVSKNLNHHLQNATH
                     TTSAHFVQKTNSKDSGSLLSQTLKNLDSIFSFKESKHKKNDKNDELVKKLTEEQLNAK
                     DTKQNL"
BASE COUNT          407 a          125 c          145 g          327 t
ORIGIN      
        1 aaaaaatttt aaatgctaaa aatttagaag agcttttaaa tatcttgact gctttaaatg
       61 aagataaaat gattaaagta tatgaagatt cttatttaaa ggaaaaattt cctaatgtaa
      121 tggtagataa atttttaaaa taattttttg aaggaagagt gatgtcaaat ttagctccgc
      181 aaaatgatgt tttaaatctt acgccgagta aaacttctac tactaattct tttagtaaaa
      241 caagtaaaaa caaagaatat gaaggtagtg atagtaaaaa ttcaactcaa gatgatacag
      301 agagtttttt aaattctttg cttcatgcta ttgatgaaac caatgaattt ttacccgatc
      361 atatgaaaat cagtcaaaaa gaagttgttg atgaggcaat aaatagactt caaaaaggag
      421 tttttgatga gagtgataag ataagcattt ttgaatctgc ttcttttatg caaattcttt
      481 ctttgctaga taagttaaaa acagacacag tagatgtcaa actagcaaat ctttctactc
      541 aactttctag tcttattaaa acagaggcta attttaatgc cctaaagggt gcatcaaatc
      601 ttagtgagct tttagatatt gctaaagatt tgggtttaaa tgtaaaaaat attaaagtag
      661 atcgacttct tgatcttaag gtaacttttc caaatttaga taaggctaat ttttttaaag
      721 gcgccgtgga taatgttttt aaggaaatta ttaataacaa aatttctaat gtaagcaaaa
      781 atttaaatca tcatttacaa aatgcaactc atactacaag tgctcatttt gtacaaaaaa
      841 ccaattctaa agatagtggt tctttgcttt ctcaaacttt gaaaaattta gattctatat
      901 tttcattcaa agaaagcaag cacaaaaaaa atgacaaaaa cgatgaactt gtaaaaaaat
      961 taacagaaga gcaattaaac gcaaaagata caaaacaaaa cctc
//
LOCUS       DAPWAA010000142          950 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.143, whole genome shotgun sequence.
ACCESSION   DAPWAA010000142 DAPWAA010000000
VERSION     DAPWAA010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 950)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 950)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.143"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..549
                     /locus_tag="RTF91_001774"
     CDS             <1..549
                     /locus_tag="RTF91_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDZ4944620.1"
                     /translation="QKVEDNPCIYENALIYAYILNANNPNPQIIRYLVDRGAKFEVYD
                     EDTSWTPMHHWAMQNEYELLELAIQGGANVDMQVFSRREYDTTLLFEAIKEPETYRVT
                     KLLIELGANVNHAIPSTPLDKVQGSRNKKLLKDAGAMTSEQLEKKYGIYYKLSDNDDI
                     GKELDEYSKLINDAIKKAKENE"
     gene            612..800
                     /locus_tag="RTF91_001775"
                     /pseudo
     CDS             612..800
                     /locus_tag="RTF91_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779767.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            811..>950
                     /locus_tag="RTF91_001776"
     CDS             811..>950
                     /locus_tag="RTF91_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDZ4944621.1"
                     /translation="MKTLEDIKAMSYKEKDELEDLVLEAIDNNDLAKVKELLKDYPVK
                     IS"
BASE COUNT          418 a          125 c          149 g          258 t
ORIGIN      
        1 caaaaagtag aagataatcc ttgcatttat gaaaatgctt taatctatgc ttatatactc
       61 aatgctaaca atcccaaccc tcaaatcatc aggtatttag tagatcgtgg agccaaattt
      121 gaagtgtatg atgaagatac aagttggact cccatgcatc attgggctat gcaaaatgag
      181 tatgaattat tagaattagc cattcaagga ggagctaatg tggatatgca agtttttagc
      241 agaagagagt atgatactac tcttttattt gaagctatca aagaaccaga aacttataga
      301 gttacaaaac ttttaataga acttggagcc aatgtaaatc atgctattcc atctactcct
      361 ttagataaag tacaaggatc tagaaataaa aagcttttaa aagatgcagg ggcgatgact
      421 tcagaacaac ttgaaaaaaa atatggtata tattataaat taagtgataa tgatgatata
      481 ggcaaagaac ttgatgaata ttctaaactc atcaacgatg ctataaaaaa ggctaaagaa
      541 aatgaatgaa aatataaaaa ttgactataa ctcatttaaa agaatttaaa gcagataata
      601 aaaagcacaa aggatcaaga tcaggtttta tttatcatag acacactcac agaagtataa
      661 aaactatatt taaagaaatg tatttacacc atataaaagg agcagcaccc aataaaatca
      721 taataaaaag attgaattta aataatccta ctaatataga agaagaatta aacaaaaaca
      781 aacacttaca aaaaaactaa aggaaaagct atgaaaacat tagaagatat taaagctatg
      841 agttacaaag aaaaagatga actagaagac ttagttcttg aggccataga taataatgat
      901 ttagccaagg taaaagagct tttaaaagat tatcctgtaa aaatatcttg
//
LOCUS       DAPWAA010000143          937 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.144, whole genome shotgun sequence.
ACCESSION   DAPWAA010000143 DAPWAA010000000
VERSION     DAPWAA010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.144"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            84..>937
                     /locus_tag="RTF91_001777"
     CDS             84..>937
                     /locus_tag="RTF91_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDZ4944622.1"
                     /translation="MKSVKVKVALIANLIAIVCLVILGIVTFIFVKQVIFHEVLQAEM
                     NYVKTSRNSVESFQARNSLAVESLAKSILRHPVQNLDNQEDLMRVVGQDLKDFRDAGR
                     FLAVYIAQPNGELIVSDKDSDAKNKDFGLYGKADNYDARTREYYIEAVKTNKLHITPS
                     YIDATTNLPCFTYSIPLHKDGKFLGVLAIDVLVTDLQAEFENLPGRTFVFDGQNKVFV
                     STDKTLLQQDYDISNIANIAKTKENFEPFEYMRIQDGNEMFGVCTKVSGIYTACIGEP
                     VSQIEAPV"
BASE COUNT          340 a          109 c          164 g          324 t
ORIGIN      
        1 atttaaaatt tttatttata attccgaaaa tattttaggt atgcctaata aattaatatt
       61 aaattcaagg agtgttatat tttatgaaaa gcgtaaaagt taaggttgca ctgattgcaa
      121 atttaattgc tatagtgtgt ttggtaattt taggtattgt aacatttata tttgtaaagc
      181 aagtaatttt ccatgaagtt ttacaagctg aaatgaacta tgttaaaacg tctagaaatt
      241 ctgtggagtc ttttcaagct aggaattctt tagctgttga aagtttagct aaaagtattt
      301 taagacatcc tgtacaaaat ttagacaatc aagaagattt aatgcgtgtt gttggacaag
      361 atttaaagga ttttagagat gctggaagat ttttagcagt ttatatagcc caaccaaatg
      421 gagaacttat cgtaagtgat aaagattctg atgctaaaaa caaagatttt ggactttatg
      481 gaaaagctga taattatgat gctagaacaa gagagtatta catagaagca gtaaaaacaa
      541 acaaacttca tattactcca tcttatatag atgcaactac aaatttacct tgctttacat
      601 actctatccc tcttcataaa gacggtaaat tcttaggtgt gttagcgata gatgttcttg
      661 ttacagattt acaagcagaa tttgaaaatt taccaggtag aacttttgta tttgatggac
      721 aaaataaagt atttgtttct acagataaaa ctctgttaca acaagattat gatattagta
      781 atattgcaaa tattgcaaaa actaaagaaa attttgaacc ttttgaatat atgagaatcc
      841 aagatggtaa tgaaatgttt ggtgtgtgta caaaagtttc tgggatttat actgcttgta
      901 ttggagagcc agtaagtcaa atagaagctc ccgtgta
//
LOCUS       DAPWAA010000144          909 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.145, whole genome shotgun sequence.
ACCESSION   DAPWAA010000144 DAPWAA010000000
VERSION     DAPWAA010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.145"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            65..>909
                     /locus_tag="RTF91_001778"
     CDS             65..>909
                     /locus_tag="RTF91_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015016418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDZ4944623.1"
                     /translation="MNSIKVKLSFIANFIAIFALIALGIISFYFTQASLYEATLQNQT
                     NLLKITQTTVEDFRSKNIAFIENLAKDITSLPLNAINSEEGLIQNTGHLLKSYRHGIN
                     ALAVYIGQSNGENIVSDESSDKLKTNVIINGKANGYDATSRPWYQDAKNQNSVIASPT
                     YIDAASKQHVISYSKALYKDGKFIGVLGIDILLTSFQNQIERIPGNAFLFDRQNQIFA
                     AANKQLLDPSVNHTPVLNAYKANGDYNFFTYSLNEQKRLGTCTKVFTYTACVTESADV
                     INKPV"
BASE COUNT          341 a          145 c          134 g          289 t
ORIGIN      
        1 gatagaataa catttaaatt tagtttttaa gctaaaaaaa caataagata ttgaaaggaa
       61 aaacatgaac agtataaaag tcaagctttc ttttattgca aattttattg caatttttgc
      121 tttaattgct ttaggtataa taagttttta ttttacccaa gcttcattat acgaagctac
      181 ccttcaaaac caaaccaact tacttaaaat tacacaaact accgttgaag attttagatc
      241 taaaaacatt gcttttattg aaaatctagc aaaagatatt acaagcttac ctttaaacgc
      301 tattaattca gaagaaggct tgatccaaaa tacagggcat ttgttaaaaa gttatcgcca
      361 tggtataaac gctcttgcag tttatatcgg acaaagtaat ggtgaaaata tcgtgagtga
      421 cgaatcaagt gataaattaa aaaccaatgt tatcatcaat ggcaaagcta atggctatga
      481 tgcaacctca agaccttggt atcaagatgc taaaaatcaa aattcagtta ttgcaagtcc
      541 aacttatatc gatgcagcaa gtaaacaaca tgttatctcc tattctaaag ctctttacaa
      601 agatggtaaa ttcattgggg ttttggggat tgatatttta ctaacaagct tccaaaatca
      661 aatagaaaga atccctggaa atgctttctt attcgatcga caaaatcaaa tatttgctgc
      721 agccaataaa caactattag atccatctgt taatcacact cctgttctaa atgcatataa
      781 agctaatggg gattataatt tttttactta tagtcttaat gagcaaaaaa gacttggaac
      841 ttgtactaaa gtctttactt atacagcttg cgtgactgaa agtgctgacg tgataaataa
      901 acctgtaat
//
LOCUS       DAPWAA010000145          904 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.146, whole genome shotgun sequence.
ACCESSION   DAPWAA010000145 DAPWAA010000000
VERSION     DAPWAA010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.146"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..170)
                     /locus_tag="RTF91_001779"
     CDS             complement(<1..170)
                     /locus_tag="RTF91_001779"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944624.1"
                     /translation="MVRDTSQDEAYLTELTIKCEAEIKKDEKRLLELPLGDPRRENYL
                     FSIEDKKFHNAMR"
     gene            complement(323..736)
                     /locus_tag="RTF91_001780"
     CDS             complement(323..736)
                     /locus_tag="RTF91_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDZ4944625.1"
                     /translation="MKKVFLDTNILLDYFNSERTYHNEAKQLIYFLIANNIQIVFSED
                     MISTIAYLIKKENLNNFTRFLKTISLEKDFNIASFGVSVINMACVYYDKYQGDFEDYL
                     QYFCAEKEGCCAIYSMDKKFPNLKIPVKRYNEIDI"
     gene            complement(739..>904)
                     /locus_tag="RTF91_001781"
     CDS             complement(739..>904)
                     /locus_tag="RTF91_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944626.1"
                     /translation="QISSPNAIENQKERKARLFVEKYAGILTGAFDPTKSAKELKRER
                     INEDLKEGRI"
BASE COUNT          294 a          136 c           90 g          384 t
ORIGIN      
        1 cgcatagcat tatgaaattt tttatcttct atagaaaaaa gataattttc tcttcttgga
       61 tctcctaaag gaagttctaa gagtcttttc tcatcttttt taatttctgc ttcacacttt
      121 attgtaagtt cggtcaaata tgcttcatct tgactagtat ctcttaccat tttttatcct
      181 ttctattacg tttacagttt ttgcgttttt gtctgccact ttagctctta atttttaatt
      241 aaaataaact aagtaaaact tacaattatt tatcttttaa atccttttat tgattgccaa
      301 attaataatg gtaattttat tgctaaatat caatctcatt atatcttttt acaggtattt
      361 ttaaatttgg aaatttttta tccatgctat aaatagcaca acaaccttct ttttcagcac
      421 aaaaatattg taaatagtcc tcaaagtctc cttgatattt atcataataa acacaagcca
      481 tatttataac gcttacacca aaagaagcaa tattaaaatc tttttccaat gaaatagttt
      541 ttaaaaaacg agtaaaatta tttaaatttt cttttttgat aagataagca atggtagaaa
      601 tcatatcttc ggagaaaact atttgaatat tatttgcaat taaaaaatat atcaattgtt
      661 tagcttcgtt atgataagtt ctttcagaat tgaaataatc taataaaata tttgtatcta
      721 aaaatacttt tttcattttc atattctacc ctcttttaaa tcttcattta ttctttctct
      781 ttttaactct ttagcagatt ttgtagggtc aaatgctcca gtaagtatcc cagcatattt
      841 ttctacaaat aatctagctt ttcgttcttt ttgattttct atagcattag gagaagaaat
      901 ttgt
//
LOCUS       DAPWAA010000146          893 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.147, whole genome shotgun sequence.
ACCESSION   DAPWAA010000146 DAPWAA010000000
VERSION     DAPWAA010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 893)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.147"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..861)
                     /locus_tag="RTF91_001782"
     CDS             complement(<1..861)
                     /locus_tag="RTF91_001782"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HDZ4944627.1"
                     /translation="MVSCNMIFYYEKYRTYRDNHPLNYKYKNNNTLLENNNLNDFIQL
                     SASSCFLRPSLIKDLVFDEKLKPNFEDARFINEYLLQNIDKNSIFLKHARYFYRKRKD
                     QNSTLDSKGKIKDYYTVVPKLGYLKLLQNVKGVIPAFIQNVVLYDLCWRVKELLNCNE
                     KLQILNFNEKQEFYEILFETFTYIESLTIKEFKNNSFNFIITQGILNYFKNEDLSQNL
                     AFIESIDDKNDEILIKYYFSDINHESKILLDEKSVIIKHSKIKQYDLLDKVFLYEKRL
                     WIKVNQNSKIL"
BASE COUNT          337 a          115 c           75 g          366 t
ORIGIN      
        1 aagtatttta gaattttgat taactttaat ccataatctt ttttcataca aaaaaacctt
       61 atctaataaa tcgtattgct ttattttaga atgcttaata ataacacttt tttcatctag
      121 taaaatcttg ctttcatgat taatatcact aaaataatac tttattaaaa tttcatcatt
      181 tttatcatca atactttcaa taaaggctaa attttggctt aaatcttcat ttttaaaata
      241 atttaatata ccctgagtta ttataaaatt aaaagagttg tttttaaatt cttttattgt
      301 caaactttct atataagtaa aagtttcaaa taaaatttca taaaattcct gcttttcatt
      361 aaaatttaaa atttgtaatt tttcgttgca attaagcagt tcttttacac gccaacaaag
      421 atcatataaa acaacatttt gtataaacgc aggaataaca ccttttacat tttgtaaaag
      481 ctttaaataa ccaagcttag gaactactgt ataataatct ttgattttgc ctttactatc
      541 aagggtggaa ttttgatctt ttctttttct ataaaaatat ctagcatgct ttaaaaaaat
      601 tgagttttta tctatatttt gcaataaata ctcatttata aatctagcat cttcaaaatt
      661 tggctttaac ttttcatcaa aaaccaaatc tttgattaaa gatggtctta aaaaacaaga
      721 tgaagcagaa agctgaataa aatcattcaa attattattc tctaatagtg tattattatt
      781 tttatattta tagtttaaag gatgattatc tctataagta cgatattttt cataataaaa
      841 tatcatatta caagaaacca tacaaatatc atcatcttta tattttttaa tat
//
LOCUS       DAPWAA010000147          871 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.148, whole genome shotgun sequence.
ACCESSION   DAPWAA010000147 DAPWAA010000000
VERSION     DAPWAA010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.148"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..414
                     /locus_tag="RTF91_001783"
     CDS             <1..414
                     /locus_tag="RTF91_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944628.1"
                     /translation="SGVEKFDLEEFKRFLESTEAKEKDIGSEVKKALENLEVPKTQVP
                     DVQKVLTPSVPNIETRQVEQLFKDPDEENKNDNGEINIDNLNIPKMTSDIEEKIKRDL
                     ITNPLQIFKENNTSKPDHLPQIGYEIKLDENSTQN"
     gene            complement(411..>871)
                     /gene="lolA"
                     /locus_tag="RTF91_001784"
     CDS             complement(411..>871)
                     /gene="lolA"
                     /locus_tag="RTF91_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDZ4944629.1"
                     /translation="LDLNFDTFSSDFKQTVKSKNSTFSYSGHFILSKDQAYWSYNTPS
                     KKEIYINKNQVTIVEHDLEQVIFSHLDNIPNLNEIFKKASFTDKDKLIAKYDNINYII
                     KLYQDKIQSISYKDEFENDVTINLNNQIKNPKTNPNVFKAQIPQDYDIVR"
BASE COUNT          324 a          106 c          143 g          298 t
ORIGIN      
        1 agtggagtgg aaaaatttga tctagaggaa tttaaacgct ttttagaaag tactgaggct
       61 aaagaaaaag atatcggtag tgaagtaaaa aaagcactcg aaaatttaga agttcctaaa
      121 actcaagttc ctgatgttca aaaggttcta acccctagtg taccaaatat cgaaactaga
      181 caagttgagc agctttttaa agatccggat gaagaaaata aaaacgataa cggagaaatc
      241 aatatagata atttaaatat acctaaaatg acttcagata tagaagaaaa aattaaaaga
      301 gatttaatca ctaatcccct tcaaatattt aaagaaaata atacaagcaa gcctgatcat
      361 ttaccacaga taggctatga gataaagctt gatgaaaatt caacgcaaaa ttaacgaact
      421 atatcgtaat cttgtggaat ttgtgccttg aaaacattgg gattagtttt tggattttta
      481 atttgattgt ttagattgat tgtaacatca ttttcaaatt catctttgta agatatgctt
      541 tgaattttat cttgataaag cttaattata tagtttatat tgtcatattt tgctataagt
      601 ttatctttat ccgtaaagct tgctttttta aaaatttcat taaggtttgg aatattatca
      661 agatgagaaa aaatgacttg ctctagatcg tgttctacta tggtaacttg atttttgttg
      721 atataaatct cttttttgct aggggtgtta taactccaat atgcttgatc tttgcttagt
      781 ataaaatgtc cagaataaga aaacgtagag tttttggatt ttaccgtttg tttaaaatca
      841 cttgaaaatg tatcaaaatt aagatcaaga g
//
LOCUS       DAPWAA010000148          812 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.149, whole genome shotgun sequence.
ACCESSION   DAPWAA010000148 DAPWAA010000000
VERSION     DAPWAA010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.149"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..>812
                     /locus_tag="RTF91_001785"
     CDS             <1..>812
                     /locus_tag="RTF91_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944630.1"
                     /translation="NDFGYIDTGTHVSHFSYTLALALGFKNIIMIGQDLAFDKDGNSH
                     SKGFSYGEQFSEEKTVPTLKIQAYGDKGEVLTHMTWNDYRVKLEYLFACNSQKAKFYN
                     ATEGGAKINFTEELSFKECCEKFLTKTKPKFELPKSLTKNRSDKLLFKFKEKIEKDKN
                     NSQRFLNDALALKQILENILSKDFLLPLEFLEKVYQNIQNFNHALDTDEFIQDGILKA
                     VICERGFKISQVYKKDILDEAHFITAYIKAYHEWLVYFIEKLEQKINIIINS"
BASE COUNT          321 a           96 c          127 g          268 t
ORIGIN      
        1 tcaacgattt tggttatata gatacaggca ctcatgtaag tcatttttct tatactttag
       61 ccttagcctt aggatttaaa aatattatca tgataggaca agatttagct tttgataaag
      121 atggaaattc tcattcaaaa ggctttagtt atggggagca atttagcgaa gaaaaaactg
      181 taccaacctt aaaaatccaa gcttatggag ataaaggaga agttttaact catatgactt
      241 ggaatgatta tcgtgtaaaa ttagaatatc tttttgcttg caatagtcaa aaagcaaaat
      301 tttataatgc taccgaaggt ggagctaaga ttaattttac tgaggagctt tcttttaaag
      361 aatgttgtga aaaatttctt accaaaacaa aaccaaaatt tgaactccca aaaagtttaa
      421 ccaaaaatag aagtgataaa cttcttttta aatttaaaga aaaaatagaa aaagataaaa
      481 acaactcaca aagattttta aatgatgctt tagctttaaa gcaaattcta gaaaatatac
      541 ttagcaaaga ttttctcttg cctttagaat ttttagaaaa agtttatcaa aacatacaaa
      601 atttcaatca tgctttagat acggatgagt ttatacagga tggtatttta aaggcggtta
      661 tttgtgaaag ggggtttaaa ataagtcagg tttataaaaa agatatttta gatgaagcac
      721 attttatcac agcttatatc aaggcttatc atgaatggct agtttatttt atagaaaagt
      781 tagagcaaaa aataaacatt attataaatt ct
//
LOCUS       DAPWAA010000149          780 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.150, whole genome shotgun sequence.
ACCESSION   DAPWAA010000149 DAPWAA010000000
VERSION     DAPWAA010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.150"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            101..235
                     /gene="rpmH"
                     /locus_tag="RTF91_001786"
     CDS             101..235
                     /gene="rpmH"
                     /locus_tag="RTF91_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDZ4944631.1"
                     /translation="MKRTYQPHGTPRKRTHGFRVRMKTKNGRKVINARRAKGRKRLAV
                     "
     gene            232..558
                     /gene="rnpA"
                     /locus_tag="RTF91_001787"
     CDS             232..558
                     /gene="rnpA"
                     /locus_tag="RTF91_001787"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDZ4944632.1"
                     /translation="MKNFDKFSTNEEFSSVYKVGKKWHCEGVIVFYLHSYEKKIAVVA
                     SKKVGKAVIRNRSKRILRALFVKFEKYLQDGKYIFIAKNEITELSFSRLEKNLKWGLK
                     KLECFK"
     gene            555..>780
                     /gene="yidD"
                     /locus_tag="RTF91_001788"
     CDS             555..>780
                     /gene="yidD"
                     /locus_tag="RTF91_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDZ4944633.1"
                     /translation="MICLKILRFYQKFLSPLKPVACRYYPSCSEYALWQFQKKNFFLA
                     FFSTFFRILKCNPFFKGGFDYPKVSKNFYPI"
BASE COUNT          293 a           99 c          124 g          264 t
ORIGIN      
        1 tatcaaaaga atttaaaaac tacccttaat caaaagcaat ttataagtaa gattgagata
       61 caatagaagt ttattttata attttttaag gaaaaatcaa atgaaaagaa cttatcagcc
      121 acatggcact ccaagaaaac gtactcatgg tttccgtgtt cgcatgaaaa ctaaaaatgg
      181 ccgcaaggtg atcaacgcaa gacgcgctaa aggtagaaaa agacttgctg tgtgaaaaat
      241 tttgataaat ttagcacaaa tgaggaattt tcatctgtat ataaagtagg taaaaaatgg
      301 cattgcgaag gtgtaattgt tttttatctt catagttatg aaaaaaaaat agcagttgtt
      361 gctagtaaaa aagttggaaa agcagtgatt agaaatcgtt caaaacgaat tttaagggct
      421 ttatttgtta agtttgaaaa atatcttcaa gatggcaaat atatttttat agctaaaaat
      481 gaaatcactg aactttcttt ttctaggtta gaaaaaaatc taaaatgggg attgaaaaaa
      541 ctagaatgtt tcaaataata tgcctaaaaa tactccgttt ttatcagaaa ttcttaagcc
      601 ctttaaaacc cgttgcttgt aggtattatc ctagttgttc cgagtatgca ctttggcagt
      661 ttcaaaaaaa gaattttttt ctagcctttt tttctacttt ttttagaatt ttaaaatgta
      721 accctttttt taagggagga tttgattatc ctaaagtttc taaaaatttt tatcctataa
//
LOCUS       DAPWAA010000150          750 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.151, whole genome shotgun sequence.
ACCESSION   DAPWAA010000150 DAPWAA010000000
VERSION     DAPWAA010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.151"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..537
                     /locus_tag="RTF91_001789"
     CDS             <1..537
                     /locus_tag="RTF91_001789"
                     /inference="COORDINATES: protein motif:HMM:NF013257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944634.1"
                     /translation="QNINFDFNTKYAIIFAGSQDKARIWNAKNYEKVCDFLYNKYSII
                     TFIAGNKNEEKIAKKIINSKQYIISICGKYNIKDIAYITSKARLVISNDSGGYHLACN
                     VSKNIICISSGACFAENINYPQKLFLTQKNISTPIAQKALENKYSEYWRFDKKLLNTI
                     ESDEICKLIDIKYSKELL"
     gene            534..>750
                     /locus_tag="RTF91_001790"
     CDS             534..>750
                     /locus_tag="RTF91_001790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDZ4944635.1"
                     /translation="MKKIILTIQDISLEGGGERVVVNLANAFSDLGYKTQILSISFQN
                     QQISYKLNNEVKLKILDKDNQLGLLNKI"
BASE COUNT          323 a           83 c           99 g          245 t
ORIGIN      
        1 caaaatatta attttgattt taatacaaag tatgccatta tttttgcagg ttctcaagat
       61 aaagcaagaa tttggaatgc aaaaaattat gaaaaagttt gtgatttctt gtataacaaa
      121 tatagtatta tcacttttat agcaggaaat aaaaatgaag aaaaaattgc taaaaaaatt
      181 attaattcaa aacaatacat catctcaatt tgcggaaaat ataatataaa agatattgct
      241 tatattacta gcaaagctag attagtaata tcaaatgaca gtggtggata tcatctagct
      301 tgcaatgtta gcaaaaacat catttgtatt tccagcggtg cttgttttgc tgaaaatata
      361 aattatccac aaaaattatt tttaacacaa aaaaatatat ccacccctat tgcacaaaaa
      421 gctttagaaa ataaatattc agaatattgg agatttgata aaaaattatt aaatacaata
      481 gaatctgatg aaatttgtaa gttaatagac ataaaatact cgaaggaatt attatgaaaa
      541 aaatcatatt aactatacaa gatataagtt tggagggtgg tggagaaaga gttgttgtta
      601 atcttgctaa tgctttttct gatttaggct acaaaacaca aatcttaagc attagctttc
      661 aaaatcaaca aatttcatat aaacttaaca atgaagtaaa acttaaaatt ttagacaaag
      721 ataatcagtt aggtttatta aataaaatat
//
LOCUS       DAPWAA010000151          730 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.152, whole genome shotgun sequence.
ACCESSION   DAPWAA010000151 DAPWAA010000000
VERSION     DAPWAA010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.152"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..442
                     /locus_tag="RTF91_001791"
     CDS             <1..442
                     /locus_tag="RTF91_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944636.1"
                     /translation="SMIILLFGDFIEYKQNKEIQNKNFIIQEEISKLKQDRQRLLKNI
                     QDLNLTLSDKILSIQQQTDILSIITKEINLDKNKTIILNQIISWLNSNGLKIINLEFE
                     QTKIILSFINENHFKTALKNLNSTFKILDKNEETFNIILEIIHE"
     gene            435..>730
                     /locus_tag="RTF91_001792"
     CDS             435..>730
                     /locus_tag="RTF91_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944637.1"
                     /translation="MSKIEVFLQNLNSREKFLFACFICLCALFLAFKIHDSFLQDIFQ
                     KTLVEHNHLPLNEAKIENSYLKETKVKLTKQIKTEEEKLKYYKEKLHLFSYDKD"
BASE COUNT          331 a           87 c           69 g          243 t
ORIGIN      
        1 tagtatgata attttattat ttggagattt tatagaatac aaacaaaata aggaaattca
       61 aaataaaaat tttatcatac aagaagaaat ttctaaacta aaacaagata gacaaagatt
      121 gttaaaaaat atacaagatt taaatcttac tctttctgat aaaatattat ctatacaaca
      181 acaaactgat attttatcta tcataacaaa agaaattaat ttagataaaa acaaaacgat
      241 catcttaaat caaatcatat catggcttaa ctccaatggg cttaaaatta taaatcttga
      301 atttgagcaa acaaaaatca ttctttcttt tatcaatgaa aatcatttta aaacagcatt
      361 aaaaaatcta aattcaactt tcaaaattct tgataaaaac gaagaaacat ttaatattat
      421 attggaaatc attcatgagt aaaatagaag tatttttgca aaatttaaat tctagagaaa
      481 aatttctctt tgcttgcttt atctgtcttt gtgctttatt tttagctttt aaaattcatg
      541 atagtttttt acaagatatt tttcaaaaaa cactagtaga gcataatcac cttccactaa
      601 atgaagcaaa aatagaaaat tcatatctta aagaaacaaa ggtaaagcta accaaacaaa
      661 taaaaacaga ggaagaaaaa ttaaaatact ataaagaaaa attgcattta ttttcttatg
      721 ataaagattt
//
LOCUS       DAPWAA010000152          717 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.153, whole genome shotgun sequence.
ACCESSION   DAPWAA010000152 DAPWAA010000000
VERSION     DAPWAA010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.153"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..>717)
                     /locus_tag="RTF91_001793"
     CDS             complement(<1..>717)
                     /locus_tag="RTF91_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944638.1"
                     /translation="LSFYFKNSKIFFLTLVLLGAKLPYFYTSFFQANLFVALFLPMVF
                     TLFCLGKHHALILNKKNIASITTLAFIGILSIVLPKNTAFNSAGLEFHFITLNFFKPV
                     SELGFLFFLIGLILIFIKTFKTKEYYLLIAFFTAYFQFLFQEGAGIRYFEFASFIFCF
                     YLLNHAYRLAFFDTLTKLPNEKNLARFVKGKNDYTIALLHFNELKDTKKSYTKLILKQ
                     IAKILKRFRAKIFIVENDFI"
BASE COUNT          303 a           79 c           97 g          238 t
ORIGIN      
        1 aaataaaatc attttctacg atgaaaattt ttgctctaaa gcgttttaga atttttgcaa
       61 tttgttttaa aatgagctta gtatagcttt ttttagtgtc ttttagttca ttaaaatgaa
      121 gcaaagcgat ggtatagtcg ttttttcctt ttacaaagcg tgcaagattt ttttcgttgg
      181 gtagttttgt taaagtgtca aaaaaagcta atctataagc gtgatttaaa agataaaaac
      241 aaaaaataaa acttgcaaat tcgaagtatc ttatccccgc tccttcttga aataaaaact
      301 gaaaatatgc agtaaaaaat gcgataagaa gataatattc tttagtttta aaggttttaa
      361 tgaaaataag tattaagcct attaaaaaaa ataaaaatcc taattcactt acaggtttaa
      421 aaaaatttaa tgtaataaaa tgaaattcta aaccagcact attaaaagca gtatttttgg
      481 gtaaaactat acttaaaata cctataaaag caagggttgt gattgaagcg atattttttt
      541 tatttaaaat taaagcatga tgctttccaa gacaaaatag agtaaaaacc ataggtaaaa
      601 acaaagctac aaataaatta gcttggaaaa aacttgtata aaaataaggt aatttagccc
      661 ctaataatac caaagtcaaa aagaaaattt ttgaattttt aaaataaaaa gataata
//
LOCUS       DAPWAA010000153          714 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.154, whole genome shotgun sequence.
ACCESSION   DAPWAA010000153 DAPWAA010000000
VERSION     DAPWAA010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.154"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..492)
                     /locus_tag="RTF91_001794"
     CDS             complement(<1..492)
                     /locus_tag="RTF91_001794"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944639.1"
                     /translation="MYKTYKYIKNHFEHYQEIFIFKKLCFLRIKTTFILGGGLELKKR
                     IYNFLGIKWHTSSVIKNGFFKELKKFNDCCIRLDSPMSFEIAKMMTVDKELFLKIKKF
                     DKNLNQESRMLFYKIVSRMLLAYQNPNRFVLADDNEKNELKNIQNNFFPEIFKLESNN
                     KDPI"
BASE COUNT          260 a          109 c           50 g          295 t
ORIGIN      
        1 aattggatct ttattattac tctctaattt aaaaatttct ggaaaaaaat tattttgaat
       61 attttttaat tcattttttt cattatcatc ggctaaaaca aaacgatttg gattttgata
      121 ggccaacaac attcttgata ctattttata gaaaagcatt ctgctttctt gatttaaatt
      181 tttatcaaat tttttaattt ttaaaaacaa ttccttatcc acagtcatca tcttggcgat
      241 ttcaaaagac ataggagagt ctaatctaat acaacaatca ttaaactttt taagctcttt
      301 aaagaaacca ttttttataa cactagaagt atgccactta atgcccaaaa aattatatat
      361 acgctttttt aattctaatc caccacccaa aataaatgtt gttttaattc ttaaaaaaca
      421 aagtttttta aagataaaaa tttcttgata atgttcaaaa tgatttttaa tatatttata
      481 tgttttatac attacaaact ccataataaa aatattcaaa attataatta aaaaataaaa
      541 ttttatatac tacaaattca atctcaatct cactcccacc tcctccttct ctaaaacctc
      601 aaataatttt ccatgaaatt tatcattttt aaattccgca gaaagctttt ttattattcc
      661 attgcttttt attttatctt tgtaattttg ccatagaatt tctttatttt tatt
//
LOCUS       DAPWAA010000154          694 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.155, whole genome shotgun sequence.
ACCESSION   DAPWAA010000154 DAPWAA010000000
VERSION     DAPWAA010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.155"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     repeat_region   26..654
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=26..61
                     /rpt_unit_seq="gttttagtccctttttaaatttctttatggtaaaat"
BASE COUNT          194 a          101 c          102 g          297 t
ORIGIN      
        1 ataaaggatt taacatgcaa atgcagtttt agtccctttt taaatttctt tatggtaaaa
       61 tgatgatgat gagaatgacg gtgattttcc agttttagtc cctttttaaa tttctttatg
      121 gtaaaatttt ttagaaaata aaccacattc ctttgtgttt tagtcccttt ttaaatttct
      181 ttatggtaaa atatccaaaa tagtttcact aagttctgtt ctgttttagt ccctttttaa
      241 atttctttat ggtaaaatgt aaaacggtcc ttattccatg caatgttagt tttagtccct
      301 ttttaaattt ctttatggta aaatgagttt actttaatga gtaggcgtcc gggggtttta
      361 gtcccttttt aaatttcttt atggtaaaat agcagtaaat ctatctttat tccatgaaac
      421 gttttagtcc ctttttaaat ttctttatgg taaaatttcc cgaattgtat cggaactatc
      481 cttaaagttt tagtcccttt ttaaatttct ttatggtaaa atattttatc gtgacgaaat
      541 attgcaggag gagttttagt ccctttttaa atttctttat ggtaaaataa agctcctgcc
      601 gccgaagcag agccggaggt tttagtccct ttttaaattt ctttatggta aaatttcatc
      661 tttttcatct cctaaaaaat cgtaagtttt agtc
//
LOCUS       DAPWAA010000155          676 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.156, whole genome shotgun sequence.
ACCESSION   DAPWAA010000155 DAPWAA010000000
VERSION     DAPWAA010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 676)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 676)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.156"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(134..>676)
                     /locus_tag="RTF91_001795"
     CDS             complement(134..>676)
                     /locus_tag="RTF91_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944640.1"
                     /translation="KPSKDFKVQEVKLVQFSQENKDCLELLIEAGQVRILNSYNSCQK
                     LSKDKNFQKFLNEDFLKLYKNNGYLVNENLQALKNAMQDIMIYYKLRYSFSKDIKDMS
                     KNRNLNILNIDEKDGGILLYKINNQACVGIELARHDSRMAMKIYGIENLDKECKLFIQ
                     SPSFKDLSYTKKDFKWYYLE"
BASE COUNT          240 a           88 c           68 g          280 t
ORIGIN      
        1 gattaatgaa aaatttaagc attcaagaaa aaaaagactt agataattgt gtttttcaaa
       61 atcttggaaa gcaagatact tttgctttaa gtgtaatttt taaaaatttt tatttgaaaa
      121 tcaaagcatt tatttattct aaataatacc acttaaaatc tttttttgta taagaaagat
      181 ccttaaaaga aggcgattgg ataaataatt tacattcttt atctagattt tctatcccat
      241 atattttcat agccattctt gaatcatgtc ttgcaagctc tattccaacg caagcttgat
      301 tgttgatttt ataaagcaaa ataccgccat ctttttcatc tatatttaaa atatttaaat
      361 ttctgttttt actcatatct tttatatctt tactaaaaga atagcgtaat ttataatata
      421 tcataatatc ttgcatggca ttttttaaag cttgtaaatt ttcattaact aaataaccat
      481 tgtttttgta aagttttaaa aaatcttcat taagaaattt ttgaaaattt ttatctttag
      541 ataatttttg gcaagaatta taactattta aaattctaac ttgaccagct tctattaaaa
      601 gctcaaggca atctttattt tcttgtgaaa attgcactaa tttaacttct tgaaccttaa
      661 aatctttact cggttt
//
LOCUS       DAPWAA010000156          664 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.157, whole genome shotgun sequence.
ACCESSION   DAPWAA010000156 DAPWAA010000000
VERSION     DAPWAA010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.157"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            35..607
                     /locus_tag="RTF91_001796"
     CDS             35..607
                     /locus_tag="RTF91_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HDZ4944641.1"
                     /translation="MKKILLSSLVAVSLLSTGLFAKEYTLDKAHTDVGFKIKHLQISN
                     VKGNFKDYSAVVDFDPASAEFKKLEATIKVASINTENQTRDNHLQQDDFFKAKKYPDM
                     TFIMKKYEKIDNEKGKMTGTLTIAGVSKDIVLDTEIGGIAKGKDGKEKVGFSLNGKIK
                     RSDFKFATSTSTITLSDDINLNIEVEANEK"
BASE COUNT          265 a           73 c          109 g          217 t
ORIGIN      
        1 tattcattca aaattactat aaaaaaggaa aaaaatgaaa aaaattttat taagttcatt
       61 ggttgcagtg tctttgttaa gtacaggctt gtttgctaaa gaatatactt tagataaggc
      121 tcatacagat gtaggtttta aaattaaaca tttacaaatt agcaatgtaa aaggaaattt
      181 taaagattat tcagcggtgg ttgattttga tcctgcgagt gctgagttta aaaaacttga
      241 agcgactata aaagttgcat ctataaatac agaaaatcaa acaagagata atcatttgca
      301 acaagatgat ttttttaaag caaaaaaata tcctgatatg acttttataa tgaaaaaata
      361 tgaaaaaatt gacaatgaaa aaggtaaaat gacaggaact ttaaccatag ccggagtttc
      421 taaagatatc gttttagata ctgaaatcgg tggtatagct aagggtaaag atggaaaaga
      481 aaaagtaggt ttttccttaa atggaaaaat caaacgctct gatttcaaat ttgcaacaag
      541 tacttcaact attactttaa gtgatgatat taatttaaat atcgaagttg aagccaatga
      601 aaagtaattt ttagcctaag agttttgttc ttaggctttg taaattttta tccaaatttt
      661 cttc
//
LOCUS       DAPWAA010000157          559 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.158, whole genome shotgun sequence.
ACCESSION   DAPWAA010000157 DAPWAA010000000
VERSION     DAPWAA010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.158"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
BASE COUNT          209 a           71 c           54 g          225 t
ORIGIN      
        1 aatttaaaaa ttattttatt tatcattttt ataataaaga gaaaaaaatg atttggcaaa
       61 gattaaaaac tatgaaagtt gtcattattc caacatcctt gtgctaataa gtttttttaa
      121 gattaagtgt gcttatttct ataatgacaa tcaaacaaaa tgaatgagtt gaaaaaacgc
      181 aatgaaggcg atataaatgc ttgctatgtt ttttctacaa ttataagatc tttaaaaaaa
      241 ccacaaacaa aactaagata ttttctatgg cctttttata aattttacct attttatatt
      301 tgcttttaaa atccatctgt ttatagtcta taatgatagt ccatttaaag caattaaatc
      361 aaactgctta atctctacat taaagcttat tcttttaatc aaatctttat ttttcgctat
      421 taactttttt gacgaagaag cttaaaattt tctccttata ggaattaaat ttttacataa
      481 aaaatgaaaa gtatttccaa aacaaagatt ttaattctca aaaattcatt ttggttattt
      541 cttgcttttt ctttcactt
//
LOCUS       DAPWAA010000158          505 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.159, whole genome shotgun sequence.
ACCESSION   DAPWAA010000158 DAPWAA010000000
VERSION     DAPWAA010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.159"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..>505
                     /locus_tag="RTF91_001797"
     CDS             <1..>505
                     /locus_tag="RTF91_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002904025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDZ4944642.1"
                     /translation="KTKFENSPKKAFNGLKNIIKDKIHHSLLHCINYEFSLHAFSNSY
                     ENLIENGEFKESIAMQKLGRYKDDEKPAKNYLYESVIYDSNIEKEIIKENHEIIETKT
                     IKVFAKLPKLSIPTPYKNYEPDFAYFLEDQKGKKIFFVCESKGYDKESDIASNERKKI
                     DYARVFF"
BASE COUNT          217 a           67 c           70 g          151 t
ORIGIN      
        1 acaaaactaa atttgaaaac tctccaaaaa aagcttttaa tggcttaaaa aacatcatca
       61 aagataaaat tcatcatagt ttattgcatt gcataaatta tgaattttcc cttcatgcgt
      121 tttcaaattc ttatgaaaat ttgatagaaa atggtgaatt taaagaaagt attgctatgc
      181 aaaaattagg gcgttataaa gatgatgaaa agccggctaa aaattatctt tacgaaagtg
      241 tgatttatga ttctaacata gaaaaagaaa tcatcaaaga aaatcatgaa attatcgaaa
      301 ctaaaacgat aaaagttttt gccaaattac ccaaattaag catccctaca ccttataaaa
      361 actacgaacc tgattttgct tattttttag aagaccaaaa gggcaaaaaa atcttttttg
      421 tatgcgaaag caaaggctat gataaagaaa gtgatatcgc atcaaatgaa agaaaaaaaa
      481 tagattatgc tagagtattt tttca
//
LOCUS       DAPWAA010000159          502 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.160, whole genome shotgun sequence.
ACCESSION   DAPWAA010000159 DAPWAA010000000
VERSION     DAPWAA010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.160"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..>502)
                     /locus_tag="RTF91_001798"
     CDS             complement(<1..>502)
                     /locus_tag="RTF91_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944643.1"
                     /translation="SINNMNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYG
                     FGNGILFKALLQNKHHQHIVVFEKDIQIIWMMFHVLDFSLELQNTRLIILETNKLEIQ
                     DYNDLCSTKPFFQFSRVYFLELMSHYYERFHEDILELNKKLGQTFKNSIVSHGNNSTD
                     ALQGIEQ"
BASE COUNT          184 a           66 c           57 g          195 t
ORIGIN      
        1 attgttctat gccttgaaga gcatctgttg aattattacc atgagaaaca atagaatttt
       61 taaaggtttg tcctagtttt ttatttaatt ctaaaatatc ttcatgaaat ctttcataat
      121 aatgactcat taattctaaa aaataaactc tagaaaattg aaaaaaaggt ttggttgaac
      181 ataagtcatt gtaatcttga atttctaatt tgttggtttc taaaattatc aatcttgtat
      241 tttgtaattc taaactaaaa tctaaaacat gaaacatcat ccaaatgatt tgtatatctt
      301 tttcaaaaac tactatatgt tgatgatgtt tgttttgaag taaggcttta aataaaattc
      361 catttccaaa accataaaaa tacaatacag gataaagcaa gtatttatca ttgtaagtat
      421 ttaacatggt ttgtaactct ttaatgggat cttgataaag taaattttca ttataccccc
      481 ccccattcat attatttata ct
//
LOCUS       DAPWAA010000160          487 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.161, whole genome shotgun sequence.
ACCESSION   DAPWAA010000160 DAPWAA010000000
VERSION     DAPWAA010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.161"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..>487)
                     /locus_tag="RTF91_001799"
     CDS             complement(<1..>487)
                     /locus_tag="RTF91_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944644.1"
                     /translation="SLERIPLTSEFFNNDFGEFDKDIVFVIKSVAHPNTLKYLQQNNR
                     NFMLISTYASFIEYLKLDNFGYFNMGLSVAHMNFLLAIHLKYKNIIFIGQDLAYAEDG
                     FSHTKDYSNLNKHEGHFQRDKDKFQCLAYGGNGKVQSSEIWTLFRQIFEKDIIHIKRN
                     Y"
BASE COUNT          173 a           72 c           57 g          185 t
ORIGIN      
        1 tgataatttc tttttatatg gattatatct ttttcaaaaa tttgtctaaa aagcgtccaa
       61 atttcagaac tttgaacttt tccatttcct ccataagcta gacattgaaa tttatcttta
      121 tctctttgaa aatgtccttc atgcttatta agattgctat aatctttagt gtgtgaaaat
      181 ccatcttctg cataggctaa atcctgtcct atgaaaatga tgtttttgta ttttagatga
      241 attgctaata aaaaattcat atgtgctaca ctaagcccca tattaaaata cccaaaatta
      301 tctaatttta aatattctat aaaacttgca taggtcgaaa taagcataaa atttctatta
      361 ttttgttgaa gatatttaag agtgttagga tgtgctacgg atttaataac aaacacaata
      421 tccttatcaa attccccaaa atcattatta aaaaattcag aagttaaagg aattctttct
      481 aaagatg
//
LOCUS       DAPWAA010000161          482 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.162, whole genome shotgun sequence.
ACCESSION   DAPWAA010000161 DAPWAA010000000
VERSION     DAPWAA010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.162"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..213)
                     /locus_tag="RTF91_001800"
     CDS             complement(<1..213)
                     /locus_tag="RTF91_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDZ4944645.1"
                     /translation="MGFRINTNVAALNAKANADLNSKNLDNSLARLSSGLRINSAADD
                     ASGMAIADSLRSQASTLGQAISNGNDA"
     gene            complement(311..>482)
                     /locus_tag="RTF91_001801"
     CDS             complement(311..>482)
                     /locus_tag="RTF91_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944646.1"
                     /translation="VLRGTFAHRGKLVADVLRLRIQEEVRFITAYIKAYHEWLVYFIE
                     KLEQKYQSLLKI"
BASE COUNT          162 a           86 c           61 g          173 t
ORIGIN      
        1 agcatcatta ccattagata tagcttgacc taaagttgat gcttgagatc ttaaactgtc
       61 tgctatagcc atccctgaag catcatctgc tgcagagttg attctaagac ctgaactaag
      121 tcttgctaaa gaattatcta aatttttact atttaagtca gcatttgctt tagcatttaa
      181 agccgcaaca ttggtgttaa tacgaaatcc cattttaaat ccttttaaaa aatttcaagc
      241 tcatccatga acttgttaaa tgctatatcg tatattgaaa aaaatatttt acaattttat
      301 atagaaattt ttatattttt aataaagatt gatatttttg ctctaacttt tctataaaat
      361 aaactagcca ttcatgataa gccttgatat aagctgtgat aaatcttacc tcctcttgta
      421 tacgaagcct taatacatca gcaactagtt ttccacgatg agcaaaagtt ccccttagaa
      481 ct
//
LOCUS       DAPWAA010000162          472 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.163, whole genome shotgun sequence.
ACCESSION   DAPWAA010000162 DAPWAA010000000
VERSION     DAPWAA010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.163"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..>472)
                     /locus_tag="RTF91_001802"
     CDS             complement(<1..>472)
                     /locus_tag="RTF91_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944647.1"
                     /translation="MLERDEIVAEFFNNDFGEFDKDIVFVCATVVHPRAIEYLQNKTF
                     IITQKRLAFPYYLKLKNFSYAAVGLSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNS
                     HPDDYQNSATYESQMYEHILITAYGGERKVKTHGIWLLFKNWFENEMIPNTTKLG"
BASE COUNT          163 a           77 c           70 g          162 t
ORIGIN      
        1 cctagttttg tagtatttgg aatcatttca ttttcaaacc aatttttaaa taaaagccat
       61 ataccatgag ttttaacttt tctttctccg ccataagcag tgattaaaat atgttcatac
      121 atttgacttt cataggtggc tgaattttga taatcatcag gatgagaatt accattttct
      181 gcataggcta aatcctgtcc tatgaaaatg atgtttttat gatttaaatg aagagaaaga
      241 tagcaagcca tatgtgcaac gctaagtcct acggcagcat aagaaaaatt tttaagtttt
      301 aaataataag ggaaagcaag gcgtttttga gttatgataa aggttttatt ttgcaaatat
      361 tcaattgccc ttggatgaac aactgttgcg caaacaaaca caatatcctt atcaaattct
      421 ccaaaatcat tattaaaaaa ttcagctact atttcatcgc gctctaacat ac
//
LOCUS       DAPWAA010000163          410 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.164, whole genome shotgun sequence.
ACCESSION   DAPWAA010000163 DAPWAA010000000
VERSION     DAPWAA010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.164"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..151
                     /locus_tag="RTF91_001803"
     CDS             <1..151
                     /locus_tag="RTF91_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944648.1"
                     /translation="IVMRYEKKIKLLNQNIQNIKEDIVNLKEITQKNCSLIEKNRSNI
                     ENIIK"
     gene            complement(153..>410)
                     /locus_tag="RTF91_001804"
     CDS             complement(153..>410)
                     /locus_tag="RTF91_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944649.1"
                     /translation="EILNYDSNEDSLSFNLDIFPSGMSYKYGILKGSMHIILQGKTSG
                     PMLFQFLKTMLYKNKSENPSEKIFTLMINQKKYYKLIVNLS"
BASE COUNT          174 a           55 c           41 g          140 t
ORIGIN      
        1 catcgttatg cgttatgaaa aaaagataaa attactcaat caaaacatac aaaacataaa
       61 agaagatata gtcaatctta aagaaataac tcaaaaaaat tgctctttaa ttgaaaaaaa
      121 tcgctctaat atagaaaata taataaaata aactaagaaa gatttacgat aagcttatag
      181 tattttttct gatttatcat taaagtaaaa attttttcac tcggattttc gcttttgttt
      241 ttatagagca tagtttttaa aaattgaaaa agcatcggac cagaagtttt tccttgtaaa
      301 ataatatgca ttgaaccttt taaaattcca tacttataac tcatgccgct tggaaatata
      361 tcaagattaa aactcaaact atcttcatta ctatcataat ttaaaatttc
//
LOCUS       DAPWAA010000164          364 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.165, whole genome shotgun sequence.
ACCESSION   DAPWAA010000164 DAPWAA010000000
VERSION     DAPWAA010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.165"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(5..80)
                     /locus_tag="RTF91_001805"
     tRNA            complement(5..80)
                     /locus_tag="RTF91_001805"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(45..47),aa:Arg,seq:tct)
     gene            complement(101..176)
                     /locus_tag="RTF91_001806"
     tRNA            complement(101..176)
                     /locus_tag="RTF91_001806"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(141..143),aa:Lys,seq:ttt)
     gene            complement(182..258)
                     /locus_tag="RTF91_001807"
     tRNA            complement(182..258)
                     /locus_tag="RTF91_001807"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(222..224),aa:Asp,seq:gtc)
BASE COUNT          107 a           92 c           87 g           78 t
ORIGIN      
        1 tgattggcga cccctagagg atttgaacct ctgtttccac acagagagag tgttgtcctg
       61 ggccactaga cgaaagggtc ataaccctaa caataaaaaa tggtgtcccg tgttggattc
      121 gaaccaacga ccccctcctt aaaagggaga tgctctaccg gctgagctaa cgagacaaag
      181 atggcgcagc ggacggggct cgaacccgcg acctccgccg tgacagggcg gcattctaac
      241 catctgaact accgctgcat ccaaaataaa gaagagagac tataaaaccc atttatgatt
      301 ttataaaatg gtggtcacta taagactcga acttatgaca tccaccttgt aagggtggcg
      361 ctct
//
LOCUS       DAPWAA010000165          352 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.166, whole genome shotgun sequence.
ACCESSION   DAPWAA010000165 DAPWAA010000000
VERSION     DAPWAA010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.166"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            61..>352
                     /locus_tag="RTF91_001808"
     CDS             61..>352
                     /locus_tag="RTF91_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944650.1"
                     /translation="MLIIGHKLLKNPNFSFIKSIEEIKDSNIYCIVYDEKLISYLSQN
                     DFEFAILVQNKDEIFLANALGAKFLLCDDKKLAKFATKVAEFYIFDSRVLMIV"
BASE COUNT          139 a           29 c           49 g          135 t
ORIGIN      
        1 cttagtaaca attttataag tataatttta aaataataaa aaataaaacc aaggaaaaaa
       61 atgcttatca ttggacataa attgctaaag aatccaaatt tttcttttat taaaagtatt
      121 gaagagatca aagatagtaa tatttattgt attgtttatg atgaaaaatt gatttcttat
      181 ttaagtcaaa atgattttga atttgctatt ttagtacaaa acaaagatga gatattttta
      241 gctaatgctt taggagctaa atttttactt tgcgatgata aaaaacttgc aaaatttgcc
      301 accaaggttg cagaatttta tatttttgat agtagagttt taatgattgt tg
//
LOCUS       DAPWAA010000166          338 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.167, whole genome shotgun sequence.
ACCESSION   DAPWAA010000166 DAPWAA010000000
VERSION     DAPWAA010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.167"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..>338)
                     /locus_tag="RTF91_001809"
     CDS             complement(<1..>338)
                     /locus_tag="RTF91_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944651.1"
                     /translation="LESIPFQRILSERKNKFDNAIVVSAGPSLAKQLSLLKAYQEKAV
                     IFCADGALSMLEKENIVPDYITNLDFTDLAINFFQDRESKISLNILSCATHPNLVHLL
                     DNKSVILRDD"
BASE COUNT          117 a           59 c           44 g          118 t
ORIGIN      
        1 atcatctctt aaaatcacac ttttattatc tagcaaatgg actaaattag gatgcgtagc
       61 gcacgaaagt atatttaagg aaattttact ttctctatct tgaaaaaaat ttattgccaa
      121 atcagtaaaa tccaaattag taatataatc aggcactata ttttcttttt caagcatact
      181 caaagcccca tccgcacaaa aaatcacagc tttttcttga taggctttga gtaaagaaag
      241 ttgtttggct aaacttggtc ctgcagaaac tactatagca ttatcaaatt tgttttttct
      301 ttcgcttaaa attctttgaa aaggtatact ttcaagca
//
LOCUS       DAPWAA010000167          338 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.168, whole genome shotgun sequence.
ACCESSION   DAPWAA010000167 DAPWAA010000000
VERSION     DAPWAA010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.168"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..>338
                     /locus_tag="RTF91_001810"
     CDS             <1..>338
                     /locus_tag="RTF91_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944652.1"
                     /translation="GARIEGTIEKPFLWACENLLDKDLNKPFVKLEPLSLNKQNEFLL
                     KAYYKVYQSIKHCKEFSKILSDDFKNIQSIYLSLNEKEEHLNLAIEKIDEFKNKLGNI
                     KQMQNLYEIL"
BASE COUNT          151 a           24 c           51 g          112 t
ORIGIN      
        1 ggagcaagga tagaaggaac tatagaaaaa ccttttttat gggcttgtga aaatttactt
       61 gataaagatt taaataaacc ttttgtaaaa ttagaacctt taagtttaaa taaacaaaat
      121 gagtttttac ttaaggctta ttataaagtt tatcaaagta ttaagcattg taaggaattt
      181 agtaaaatac tgagtgatga ttttaaaaat atacaaagta tatatttgag tttaaatgaa
      241 aaagaagaac atttaaattt agctattgaa aaaatagatg agtttaaaaa taaactagga
      301 aacattaaac aaatgcaaaa tttgtatgaa attttgca
//
LOCUS       DAPWAA010000168          315 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.169, whole genome shotgun sequence.
ACCESSION   DAPWAA010000168 DAPWAA010000000
VERSION     DAPWAA010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.169"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..>315
                     /locus_tag="RTF91_001811"
     CDS             <1..>315
                     /locus_tag="RTF91_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944653.1"
                     /translation="KKDKQNLCEFLFYSRSLYIVLSSMDTILDQNLSNTLALKFKDIT
                     QKTQDILASKNLNQDLLLFLSSEKIQDLFNDFDFFIKENSFYEGDCKDRFFKQLVALE
                     LR"
BASE COUNT          125 a           26 c           45 g          119 t
ORIGIN      
        1 aaaaaaagac aagcaaaatt tatgtgaatt tttattttat tcaagaagct tgtatatagt
       61 tttatcaagt atggatacta ttttagatca aaatttaagt aacactttgg ctttaaagtt
      121 taaagatata acacaaaaaa ctcaagatat tttagcaagt aaaaatttaa atcaggattt
      181 attgttattt ttaagcagtg aaaaaattca agatttgttt aatgattttg attttttcat
      241 aaaagagaat tctttttatg aaggtgattg caaagataga ttctttaaac agcttgttgc
      301 attagagctt agaaa
//
LOCUS       DAPWAA010000169          303 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.170, whole genome shotgun sequence.
ACCESSION   DAPWAA010000169 DAPWAA010000000
VERSION     DAPWAA010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.170"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..>303
                     /locus_tag="RTF91_001812"
     CDS             <1..>303
                     /locus_tag="RTF91_001812"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDZ4944654.1"
                     /translation="EEKMEIQKQLFDFIKNNDLENIKNLLKDYPVKESFYEAHFKNPN
                     SKDELSLFDPCTTIVRAAFSCGNHDNDFSILDYLFDEYGLSLKDPKYNLRFMDMKH"
BASE COUNT          118 a           32 c           43 g          110 t
ORIGIN      
        1 tgaagaaaaa atggaaattc aaaaacaatt atttgatttt atcaaaaata atgacttaga
       61 aaatattaaa aatcttttaa aagattatcc tgtaaaagaa agcttttatg aggcacattt
      121 taaaaatcct aatagcaagg atgaattatc tttatttgat ccttgcacaa ctatagtaag
      181 agcggcattt tcttgcggaa atcatgacaa tgatttttct attttagatt atttatttga
      241 tgagtatggt ttgagtttaa aagatcctaa atataatctt cgctttatgg atatgaaaca
      301 tat
//
LOCUS       DAPWAA010000170          282 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.171, whole genome shotgun sequence.
ACCESSION   DAPWAA010000170 DAPWAA010000000
VERSION     DAPWAA010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.171"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..>282
                     /locus_tag="RTF91_001813"
     CDS             <1..>282
                     /locus_tag="RTF91_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944655.1"
                     /translation="ALSVVDLSEELKIYKIVLFDCAAEDLEIQIAMTFDQQSILEYLS
                     LYEMFISASYYLRFYEKQILFLNEMCLKTIGVAVRNADISCFLPLLTHGQ"
BASE COUNT           89 a           26 c           54 g          113 t
ORIGIN      
        1 gctttaagtg tggtggattt gagtgaagaa ttaaaaattt ataagattgt gttatttgat
       61 tgtgctgcag aggatttaga aattcaaatc gctatgactt ttgatcaaca aagtatttta
      121 gagtatttaa gcttatatga aatgtttatt agtgcttctt attatcttcg tttttatgaa
      181 aaacaaattt tatttttaaa tgaaatgtgt ttaaaaacca taggagtggc ggtaagaaat
      241 gcggatattt cttgcttttt gcctttatta actcatggac ag
//
LOCUS       DAPWAA010000171          282 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.172, whole genome shotgun sequence.
ACCESSION   DAPWAA010000171 DAPWAA010000000
VERSION     DAPWAA010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.172"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..>282
                     /locus_tag="RTF91_001814"
     CDS             <1..>282
                     /locus_tag="RTF91_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944656.1"
                     /translation="ALSVVDLSEELCSGKIYFVDINEERVDIQLLILFDMKDMFEYLS
                     LYEMFVNNSFYKQFQQDVWYKANTLCEKNIQVVVRNLSSSLYIGFECYSN"
BASE COUNT           94 a           21 c           57 g          110 t
ORIGIN      
        1 gctttaagtg tggtggattt gagtgaagag ctttgtagcg ggaaaattta ttttgtagat
       61 atcaatgaag aaagagtaga tatccaatta cttatacttt ttgatatgaa agatatgttt
      121 gagtatttaa gcttgtatga aatgtttgtg aataattctt tttataaaca atttcaacaa
      181 gatgtttggt ataaggctaa tacactttgt gagaaaaata ttcaagtggt agtaagaaat
      241 ttaagctcta gtttatatat tggctttgag tgttattcta at
//
LOCUS       DAPWAA010000172          275 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.173, whole genome shotgun sequence.
ACCESSION   DAPWAA010000172 DAPWAA010000000
VERSION     DAPWAA010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.173"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
BASE COUNT          117 a           26 c           30 g          102 t
ORIGIN      
        1 attaagcaaa atttatattt tagcaattgt cgttttaaat tgacacaatt tgaaaatatt
       61 tgcttcaata atttagaaat taatgaatgc aaatatgaag atgtatttgc aatagtattt
      121 aacacttgtg aatttaaaaa attaaatttg ttatttaata ctttcctaca agatgttaaa
      181 tttgaaaaca ccaaaataga ataccttaat ttaaaggtaa atcgatttga aagatatctc
      241 tttataaaaa attgcactat agaaaatata agctt
//
LOCUS       DAPWAA010000173          273 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.174, whole genome shotgun sequence.
ACCESSION   DAPWAA010000173 DAPWAA010000000
VERSION     DAPWAA010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.174"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            14..>273
                     /locus_tag="RTF91_001815"
     CDS             14..>273
                     /locus_tag="RTF91_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ4944657.1"
                     /translation="MKEENNFKKNLKALSGFEYNNLRKKLQDLKELREFTFTQGKDNL
                     DLNIIKKRNLKKMYQDPIKELEKNLEYFKDFARYPVLFFYGFG"
BASE COUNT          123 a           32 c           38 g           80 t
ORIGIN      
        1 aaaaggtgag aaagtgaaag aagaaaacaa ttttaaaaaa aatttaaaag ctttaagcgg
       61 ttttgagtac aacaacttac gcaaaaaact tcaagaccta aaagaactta gagaatttac
      121 ttttacacaa ggaaaagata atctagatct taatatcatc aaaaaaagaa atttaaaaaa
      181 aatgtatcaa gatcccatta aagaacttga aaaaaattta gaatatttta aagactttgc
      241 gcgctatccc gttttatttt tttatggttt tgg
//
LOCUS       DAPWAA010000174          253 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.175, whole genome shotgun sequence.
ACCESSION   DAPWAA010000174 DAPWAA010000000
VERSION     DAPWAA010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.175"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            complement(<1..>253)
                     /locus_tag="RTF91_001816"
     CDS             complement(<1..>253)
                     /locus_tag="RTF91_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944658.1"
                     /translation="AIFGLISLFLNFLNLEKIDFVFIFIVLPLLMMFLKKELHLQFVD
                     NAYNDFRIVIIASFFTALFYAFYGLFFTYNGPLNLELFSK"
BASE COUNT          127 a           32 c           22 g           72 t
ORIGIN      
        1 cttagaaaaa agttctaaat ttaaaggtcc attatatgta aaaaaaagtc cataaaacgc
       61 ataaaacaaa gcggtgaaaa aacttgcgat aataactatt ctaaaatcat tataagcatt
      121 atctacaaat tgcaaatgta attctttttt taaaaacatc atcaataaag gcaaaactat
      181 aaatataaaa acaaaatcaa ttttttcaag atttaaaaaa ttcaaaaata aagaaataag
      241 tccaaaaatt gct
//
LOCUS       DAPWAA010000175          243 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.176, whole genome shotgun sequence.
ACCESSION   DAPWAA010000175 DAPWAA010000000
VERSION     DAPWAA010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.176"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            <1..154
                     /locus_tag="RTF91_001817"
     CDS             <1..154
                     /locus_tag="RTF91_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ4944659.1"
                     /translation="LSLNGDFKDLLNFIQNLENLPMALEIDKIKLYNTQGLKLRLDLM
                     LKFINL"
BASE COUNT           98 a           24 c           28 g           93 t
ORIGIN      
        1 gctaagttta aatggtgatt ttaaagactt gcttaatttt atacaaaatt tagaaaatct
       61 tcctatggct ttagaaattg ataaaataaa actatacaac acacagggtt taaaactaag
      121 gcttgattta atgcttaaat ttattaattt ataatagtat tacaatgtta ctaaatatta
      181 ttagaaaaaa tactaggaaa gataaactca gtatttttat gttgttttta tctttccata
      241 aaa
//
LOCUS       DAPWAA010000176          227 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.denovo.177, whole genome shotgun sequence.
ACCESSION   DAPWAA010000176 DAPWAA010000000
VERSION     DAPWAA010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 227)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 227)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.denovo.177"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            3..>227
                     /locus_tag="RTF91_001818"
     CDS             3..>227
                     /locus_tag="RTF91_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDZ4944660.1"
                     /translation="MDLKQEDLDILQEMIIEFAKYEDMLDFLQCTKEKLEHSLLKNKF
                     ARAFLLKENEKTIGYMIYFYTFSSFWGSGGI"
BASE COUNT           87 a           25 c           35 g           80 t
ORIGIN      
        1 ttattgattt aaaacaagaa gatttagata ttttacaaga gatgataata gaatttgcaa
       61 aatatgagga tatgttagac tttcttcaat gcacaaaaga aaaactagaa cattctttac
      121 tcaagaataa attcgctcgt gcctttttac taaaagaaaa tgaaaaaact ataggctata
      181 tgatttattt ttatactttt tcatcttttt ggggaagcgg tggaatt
//
LOCUS       DAPWAA010000177         3657 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate FIXT-74
            SAMEA6788386-rid18269163.guided.100, whole genome shotgun sequence.
ACCESSION   DAPWAA010000177 DAPWAA010000000
VERSION     DAPWAA010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA6788386
            Sequence Read Archive: ERR4045271
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768472.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768472.1
            Genome Coverage       :: 127x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/05/2023 16:08:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,780
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 53 of 71
            Pseudo Genes (incomplete)         :: 25 of 71
            Pseudo Genes (internal stop)      :: 24 of 71
            Pseudo Genes (multiple problems)  :: 26 of 71
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3657
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA6788386-rid18269163.guided.100"
                     /isolate="FIXT-74"
                     /isolation_source="the intestinal tract of small mammals"
                     /host="Myodes sp."
                     /db_xref="taxon:197"
                     /country="Finland"
                     /collection_date="2017"
                     /collected_by="Natural Resources Institute Finland and
                     Finnish Food Authority"
     gene            5..707
                     /locus_tag="RTF91_001819"
                     /pseudo
     CDS             5..707
                     /locus_tag="RTF91_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934081.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class D beta-lactamase"
     gene            complement(890..1762)
                     /locus_tag="RTF91_001820"
     CDS             complement(890..1762)
                     /locus_tag="RTF91_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HDZ4944661.1"
                     /translation="MIKIDINHPINTAKGTLDLNFKKDIELGKITALFGESGAGKTTL
                     LKIIAGLIKPKFGRIEVDNELWFDSLKGFDLALQKRKIGFVFQDYTLFPNMNVKENIA
                     YAASSKKKVQELLALMGLENLAKIYPKNLSGGQAQRVALARALAREPKILLLDEPLSA
                     LDFKMRANLQDELVRILHHFRISTLLVSHDLAEIYKLSHRVLELKNGKIIKDFPKNEF
                     FTHSNISAKLRLSGILLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKDYQDIRIGDT
                     LILSVKAFNPLILK"
     gene            complement(1759..2433)
                     /gene="modB"
                     /locus_tag="RTF91_001821"
     CDS             complement(1759..2433)
                     /gene="modB"
                     /locus_tag="RTF91_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDZ4944662.1"
                     /translation="MLDSTFLQTLYLTFKLAFITTFILFFIGVFSAYLLSFVRFPFKI
                     ILQSLISLPLVLPPSVLGFYLLVSFSTNSSLGQFLKEYFNLSLVFSFEGLVFASLIFS
                     LPFMVNPLQSAFSSINPNLLDASYSLGKSKIYTLFRVILPNSKAGIFSACAMSFAHTV
                     GEFGVVMMIGGHKQGETLVASIAIYDELEVLNYSLAHQYAFILFVFSFLVLFSLYFVN
                     KKMSFQ"
     gene            complement(2426..2827)
                     /locus_tag="RTF91_001822"
     CDS             complement(2426..2827)
                     /locus_tag="RTF91_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-pterin-binding protein"
                     /protein_id="HDZ4944663.1"
                     /translation="MNLIKGQICELLNQEDIVIVKIVSKEVVFSVLMLELKSLENLKI
                     GANVELLFKEHELCFSAAKSLLSVENSFLAKITRIKKGALLYHVFFNFKGSELSSIIT
                     KEKALDLEICENQEWLCFVKANDIVLRNNHA"
     gene            complement(2824..3573)
                     /gene="modA"
                     /locus_tag="RTF91_001823"
     CDS             complement(2824..3573)
                     /gene="modA"
                     /locus_tag="RTF91_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDZ4944664.1"
                     /translation="MKKFIVFFGILLFGLNLNAQNLSIFVASSASKAMNEVKDEFLKI
                     HPNNKIELVFGASGKYYELLKQGREFDLFFSADTKYAQAIYEDENALIKPKVYVLGVL
                     ALYSLDENLLEGGIENLKEKADKITHLSIANPKVAPYGVAAKEVLENLGLNELFKDKI
                     VLGENISVPVLHVDSKNANLAIVAYSLVSPISHPKGKTSIIDPKYFNPLEQSYVITKY
                     AKDKKLAFEFSDFINSSKAKEIFKKYGFNTP"
BASE COUNT         1384 a          527 c          453 g         1293 t
ORIGIN      
        1 aaaaattatc ttatttttta tagttttaaa ttttgccttt aggcaagata aaatattaga
       61 aaattttttt aaagactata taatacaagt ggagttttta tagtctttga tggaaaaaat
      121 tatgcaagta atgattttaa aagagctgaa aaaccttttt ctcctgcttc aacttttaaa
      181 attttaatgc tttaattgca cttaatagcg gcgtgattaa tgatacaaag aaagtatttt
      241 tatcctctta gaaacaagat gctgatttaa cttcagctat aaagcgttct taagtacctg
      301 cttttaaaga attggcaaga aaaattaaac aagctttctt atggaaatgc aaaaatttct
      361 aaaatcgata ttttttgact tgataattct ttacaaattg cagcaaaaaa ttaggctaat
      421 ttatttttca aactttcgca aaattcttta ccttttttaa agcaaagtca agaagaagtt
      481 aaaaatattc ttttttaaag aaaataaaat ataaaaaaat tatgctaaaa cgggttttaa
      541 tgatggtata aatttagctt ggattgttgg atttataaaa actaaaaata aaatttttat
      601 cttttgcttt aaatgttgat ataaaggata ttaaaagcat taaaataaga gaagaattgc
      661 tagaaaaata tttagccttt aatagttgca atatcataag agattgaaat aataatatat
      721 agcagcttta aagaaaaata gatactattt atacgagagg ttttagagta ttatgtctat
      781 ttttagcagt tgttttggtt ttgttgtttt ttaaaatcaa aataacttac ttaattatta
      841 gtgtattttt gcttaattat ttttatttaa aatcataatg aagcatatat tatttaagaa
      901 ttaaaggatt aaaagctttt actgaaagta tgagagtatc gcctattctt atatcttgat
      961 aatcttttaa aaattcttcc tcgctaagag tgattttgat aatatcttga tttaaaagca
     1021 aggtcaaaac caccaaaata tcgctttttt taatttctag taaaatccca cttaagcgta
     1081 attttgcgct aatatttgag tgagtaaaaa attcattttt aggaaaatct ttaatgattt
     1141 ttccattttt aagctctaaa actctatgac ttaacttata aatttcagct agatcatgac
     1201 taactaacaa agtgctaatt ctaaaatgat gtaaaattct aaccaattca tcttgtaaat
     1261 ttgcacgcat tttaaaatcc aaagcactca aaggttcatc taaaagcaag atttttggtt
     1321 ctcttgctaa agctcttgct aaagccactc tttgtgcttg tcctccactt aaattcttag
     1381 gataaatttt ggctaaattt tcaagcccca ttaaggccaa aagctcttgt accttctttt
     1441 tagaactagc agcataagca atattttctt ttacattcat attaggaaaa agcgtataat
     1501 cttgaaaaac aaaaccaatt tttctttttt gcaaagctaa atcaaaacct tttaaagagt
     1561 caaaccaaag ctcattatcc acttctatac gcccaaattt aggctttata agtcctgcta
     1621 tgatttttaa aagagtggtt tttcctgctc cactttcacc aaaaagtgcg gtaatttttc
     1681 ctagttctat atctttttta aaatttagat ccagtgttcc tttagcggta tttataggat
     1741 gattgatatc aatttttatc attgaaaact cattttttta ttgacaaaat aaaggctaaa
     1801 aagcaccaaa aaagaaaaaa caaataatat aaaagcatat tgatgcgcta agctatagtt
     1861 taatacctca agctcatcat aaatagctat actagcaacc aaagtttcac cttgtttgtg
     1921 tcctcctatc atcatcacta caccaaattc gcctacagta tgagcaaagc tcatcgcgca
     1981 agcgctaaaa attcctgctt tagaattagg taaaatcact ctaaaaagag tataaatttt
     2041 acttttacct aaactataag aagcatcaag taaatttgga ttaatcgatg aaaaggcgct
     2101 ttgcaaagga tttaccataa agggtagtga aaaaattaaa gaagcaaaaa caagaccttc
     2161 aaaactaaaa actaaagaaa gattaaaata ttcttttaaa aattgcccca aagaactatt
     2221 agttgaaaag ctaacaagca aataaaatcc taaaacacta ggaggtaaaa ccaaaggcaa
     2281 ggaaataaga ctttgaagga ttattttaaa aggaaagcgc acaaaactta ataaataagc
     2341 cgaaaaaaca ccaataaaaa aaagaataaa agtcgtgata aaagcaagct taaaagtaag
     2401 ataaagtgtt tgtaaaaaag ttgaatcaag catgattgtt ccttagtaca atatcatttg
     2461 ccttaacaaa acaaagccat tcttgatttt cacaaatttc aagatctaaa gctttttctt
     2521 tggtgataat actagaaagt tcactacctt taaaattaaa gaatacatga tataaaagtg
     2581 cacctttttt aattcttgta attttagcta aaaaagaatt ttcaacactc aagagagact
     2641 tagctgcact aaaacaaagt tcgtgttctt taaaaagaag ttctacattt gcgccaattt
     2701 ttaaattttc taaagatttt aattcaagca tcaaaacact aaaaactact tctttagaaa
     2761 ctattttaac aataactata tcctcttgat ttaaaagttc acaaatttgt ccttttataa
     2821 ggttcatggt gtgttaaatc catatttttt aaaaatttct tttgcttttg aagaattgat
     2881 aaaatcgcta aattcaaaag ctaatttttt atctttagca tattttgtaa tgacataact
     2941 ttgttctaaa ggattaaaat actttggatc aatgatactt gttttacctt taggatggct
     3001 aataggagaa actaaagaat aagctactat ggccaaattt gcatttttac tatctacatg
     3061 aagaacgggt actgaaatat tttcacctaa gacaatttta tctttaaaaa gctcatttaa
     3121 acctaaattt tcaagtactt ctttagctgc tactccataa ggagctactt taggattggc
     3181 tatgcttaga tgcgtaattt tatctgcctt ttcttttaaa ttttcaatgc ctccttcaag
     3241 caaattttca tccaaactgt ataaagctaa aactcctaaa acataaacct ttggctttat
     3301 taaggcgttt tcatcttcat aaatagcctg agcgtattta gtatcagctg aaaaaaagag
     3361 atcaaattct cttccttgtt ttaaaagttc ataatatttt ccagaagcac caaaaactaa
     3421 ctctatttta ttattaggat gtatttttaa aaattcatct ttaacttcat tcatggcttt
     3481 tgaagctgaa gaagctacaa aaatacttaa attctgtgcg tttaaattta aaccaaacaa
     3541 caaaatccca aaaaatacta taaatttttt catttaattt tccttgttta aaaatttaat
     3601 ttttgaatta taacataaaa aatttatttt atatcatttt tgcataaaat aaatacg
//
