LOCUS       DAPWGO010000001        57905 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.001, whole genome shotgun sequence.
ACCESSION   DAPWGO010000001 DAPWGO010000000
VERSION     DAPWGO010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 57905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 57905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..57905
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.001"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..90)
                     /locus_tag="RJ336_000001"
     CDS             complement(<1..90)
                     /locus_tag="RJ336_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HDZ5212489.1"
                     /translation="MIYENDLIYIEKEEAQVPWLKIFTKEIYKE"
     gene            197..901
                     /locus_tag="RJ336_000002"
     CDS             197..901
                     /locus_tag="RJ336_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212490.1"
                     /translation="MQISSSYNSYDYYSSKPSFDKTNQSDSTQKDEKNLSENKDDKEK
                     NGEQTQMVNGVELSQKEVAQVRELQSIDRNVKAHEAAHQAAGGGLAGAASFTYTRGPD
                     NQMYATAGEVPISMQKGNTPEETIANARQIAAAAMAPADPSPQDYKVAANATKMEFEA
                     RAEAMKLKAEEAKEKEEENKEKDDKNSENSLEKTDKDSKNNDKNSNFDKDFKNFVART
                     YQQNSQNNDIKFNIAS"
     gene            complement(964..1170)
                     /locus_tag="RJ336_000003"
                     /pseudo
     CDS             complement(964..1170)
                     /locus_tag="RJ336_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866324.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1459..3180)
                     /locus_tag="RJ336_000004"
     CDS             complement(1459..3180)
                     /locus_tag="RJ336_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HDZ5212491.1"
                     /translation="MAEVLKKVDVVTVGAGWTGGIVAAELTKAGLNVLSLERGHMQST
                     ENFNFIHDEWRYGINYGLMQDCSKDTVTFRHDPSGLALPYRKMGSFLLGNNVGGAGVH
                     WNGWTFRFMPYDFEIQTLSKQRYGNKLGNDYTLQDWGVTYKDMEPYYDRFEKTCGVSG
                     EPNPLAEKMGAFRSSSYPQEPLENTKMLKRFESAAKSSNLHTYRLPASNSKGGYTNPD
                     GQDLAPCQYCAYCERFGCEYGAKASPLNTVIPKAMSTGKYTIRTYSNVTQILKKDGKV
                     TGVKFVDTRTMKEYIQPADIVVLTSYMFNNAKLLMVSNIGEQYDPKTGKGTLGRNYCY
                     QMNMGTTAFFDEQFNTFMGSGALGTTSDDFNGDNFDHSKEKFLHGAMIYSVQLGTRPI
                     QSAPLPAGAPTWGAEFKKALNYNFTRAITVGGQGASLPHKNNYLSLDPTYKDAFGMPL
                     LRLTYNFTDQDRALHKFITDKTAEVAKRMQGVKSIKKGAYLKDYSVVPYQSTHNTGGT
                     TMGADRETSVVNTYLQHWDADNLFVVGAGNFQHNSGYNPTDTVGALAYRCAEGILKYH
                     KSGKSLA"
     gene            complement(3182..3910)
                     /locus_tag="RJ336_000005"
     CDS             complement(3182..3910)
                     /locus_tag="RJ336_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HDZ5212492.1"
                     /translation="MQDNIIDRRSFFKLGLLGGSVVAASTIGGGAVLKAAELTHSHQA
                     SQGKSNKVRGRMFFQTQTEFDTLSAACERIYPKDEQGEGAIGLGVPYFIDNQLASAYG
                     YNDREYMQGPFMEGKAEQGYQTPMQRKDIFLEGVHALEENAQKRYKKSFSLLKGGDQD
                     KILSDFEKGKIQTTGFKSSYFFTLLRDMTVAGVLADPIYGGNDNKNGWRMMQYPGAQM
                     SYVDKIASDEFFNIEPMSLADMES"
     gene            complement(4046..4750)
                     /locus_tag="RJ336_000006"
     CDS             complement(4046..4750)
                     /locus_tag="RJ336_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDZ5212493.1"
                     /translation="MRIFLALFLFFNSLFALSELEEGLKLYEANKFDKAYEIFKNLCE
                     KDISKACFSLAFMHESAKGVSKDLNQAYKFYDKACKLGLANACSNMALLLQNQGYKNE
                     ALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDK
                     GELVKASVKSALAFYSKSCTLGFGEACYLLGRYNQLEKQDLTKAKRYFGMACDQKHQE
                     ACAAYKELNSKDIELY"
     gene            complement(4750..6579)
                     /locus_tag="RJ336_000007"
     CDS             complement(4750..6579)
                     /locus_tag="RJ336_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDZ5212494.1"
                     /translation="MQINLLNDFIKAYENTYSVSFDDSFKGRIQELCKELNEPFMHAS
                     YALENELKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLR
                     YAKEYFLRVEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTP
                     GLNANENDTLTTLDELKNIHGAIWLSLIDNAGKKSEEDAIKANLELLGENSICVLNQK
                     DKLSTEELDNVLNYAKSVFLKYFNELIAISCKEAKDEQSYEKSNFQSLLDFLTQLDTT
                     ALKEKFVKRKILNLCEILEDENQLFVGIFDRLLNQFQNYEKHLLLAYENFLKEIEILN
                     HQILEQLKSISERISSEIFASVKEKDAYFYKESKGFLKKDLYTRYDYKAPYISSDDAF
                     LAMFYNSDVMSKEFKKIKNELYKSFEEIKMKLKDFINILEREILLFKAEFSNIQKDHI
                     FQSDKNFSELRAFCNASDEYFLKDFKELLFKSILELDLFFEKLNLKAFTNYENATKLS
                     LAFFSRKINESRVLYELDSSEFVLFYPKKSEIYERVLNELNVYEFEALLINKPILTKI
                     AKNFLEQSQNLIQEKNKFLDLKKAELQKRRAQILNVRESIKED"
     gene            complement(6569..8755)
                     /locus_tag="RJ336_000008"
     CDS             complement(6569..8755)
                     /locus_tag="RJ336_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDZ5212495.1"
                     /translation="MKELFQKIWQNELQFLNFDAKFQDKNKLDTAECAIILSVNKDNY
                     ERYFLLKEFQELCKKIDLRVDIFSIQNAQICILNLFKSGFIPKQDLLKALKILEKISK
                     NTEIFDFISQEKVQSIDQKALFQNDFKELNTINLELQKLSFDENLKSRLQKTLEKFQN
                     LEFNIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLSYGKSEEAKIYFWDKK
                     EWQNILESSHFNADLKEFIDKLDKSVNIQDFIKDKPLIQNIALCELKNFSSAKNKISA
                     LIKKIEIKSHLDFLKNNISIVDTPGLDDVVVQREIVTNEYLRESDFLIHLMNASQSLT
                     QKDADFLVHCLLNSRLSKFLIVLTKADLLSKKDLEEVIVYTKESLKSRLVDLDENLVE
                     KIDFLCVSAKMASDFYKSLAPKESLQKSGMQEFENYLFNELYAGEKSKIALRAYKKEL
                     HLELKNILSEYEMQNRLIKENKQGVSEENQKLLLELQKQNTLLKEAQDEISNSVAKLK
                     NIDSGIDNLVLLLVKKLKERLIDEFKYLKNNAQKLNLSRILNIVDITTKDGINDILRE
                     IKFENIKKIEELKTNLSLKYDFLKDDFDNGFEGFKDGISKNIDSIFQSEKFALLRLKI
                     EKLSNLKSDLYELETNLDTVIFDTFKEFKMSEILNSLNINGAFFEFLNDKLKHYEKNQ
                     KSKLESLEKVLQSLKNQDANILNSFEENLEKIEKLKQLEMGLLNAD"
     gene            complement(8783..9508)
                     /locus_tag="RJ336_000009"
     CDS             complement(8783..9508)
                     /locus_tag="RJ336_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur subunit"
                     /protein_id="HDZ5212496.1"
                     /translation="MSRKLTIKAFKYNPLSKISKPHFVTYELEETPFMTVFVCLTLIR
                     EKMDADLSFDFVCRAGICGSCAMMINGVPKLACKTLTKDYPDGVIELMPMPAFRHIKD
                     LSVNTGEWFEDMCKRVESWVHNEKETDISKLEERIEPEVADETFELDRCIECGICVAS
                     CATKLMRPNFIAATGLLRTARYLQDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNC
                     PKELPLQSKIAYMRRQLVAQRNK"
     gene            complement(9501..11492)
                     /locus_tag="RJ336_000010"
     CDS             complement(9501..11492)
                     /locus_tag="RJ336_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase flavoprotein subunit"
                     /protein_id="HDZ5212497.1"
                     /translation="MNIQYSDALVIGGGLAGLRAAIEVAKSGQSVTLLSICPVKRSHS
                     AAVQGGMQASLANGAKGEGDNEDLHFADTVKGSDWGCDQEVARMFAQTAPKAVRELAA
                     WGVPWTRVTKGPRTVVINAQKTVIEEKEEAHGLINARDFGGTKKWRTCYIADATGHCM
                     LYGVANEAIKHQVKIIDRMEAVRIIHDGKKCLGVIARDLTNGQLIAYIARGTMIATGG
                     YGRIYKQTTNAVICEGTGAAIALETGLCRLSNMEAVQFHPTPIVPSGILLTEGCRGDG
                     GILRDVDGYRFMPDYEPEKKELASRDVVSRRMMEHIRKGKGVKSPYGDHLWLDISILG
                     RAHVEKNLRDVQDICKTFNGIDPADEGPKGWAPVLPMQHYSMGGIRTKPTGESQWLNG
                     LFACGEAACWDMHGFNRLGGNSCAETVVAGMIVGDYFADYCKNNGEVIDTNVVKDFLT
                     KEYQYLKSLVDKEGKHNVFEIKNRMKEIMWDKVAIFRTGEGLKEAVDELEKLYKDSQD
                     VKVHCKELDCANPELEEAYRVPRMLKIALCVAYGALLRTESRGAHYREDYPKRDDLNW
                     MKRTNTFWVEGETLPRIEYEELDIMKMEIPPAFRGYGAKGNIIENPLSEKRQAEVDAI
                     REKMEAEGKGRYEIQNALMPYELQAKYKAPNQRIGVDYE"
     gene            complement(11476..12258)
                     /locus_tag="RJ336_000011"
     CDS             complement(11476..12258)
                     /locus_tag="RJ336_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase cytochrome b subunit"
                     /protein_id="HDZ5212498.1"
                     /translation="MRELIEGYLGKSIEGKKSKMPAKLDFIQSASGLFLGLFMWVHML
                     FVSTILVSEDFFNSVVHFLELKFVYDNPVMSYLTSFLAACVLVVFFVHALLAMRKFPI
                     NYRQYQILRTHSKKMNHSDTSLWWVQAFTGFIMFFLGSAHLIFIVTNADKISGDMSGD
                     RVVSHFMWLFYAVLLVCVELHGSIGLYRLCVKWGWFEGKNVKESRKKLKTAKWIISIF
                     FLVLGVLSLAAFIKIGYENYQNQTQTTAMIKNYNGANYEYTI"
     gene            complement(12327..13142)
                     /locus_tag="RJ336_000012"
     CDS             complement(12327..13142)
                     /locus_tag="RJ336_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDZ5212499.1"
                     /translation="MEFWQHIYSNFNVIAFSIFGLKVHWYGIMYVIALLLALLLAKFF
                     VRKFQLDINEKHLDSYFIWVEIGVILGARLGYILIYDANTMYYITHPWQIFNPYINGE
                     FVGIRGMSYHGAIIGFLIATLLFCKKYKTNPWIFLDLVALSVPLAYVFGRIGNFLNQE
                     LFGRITNVPWGIYVDGVLRHPSQLYEAFLEGIVVFIIVYLARFKQSFQGELILVYAGA
                     YSLARFICEFYREPDFGIGFVLWGMSMGQILSFIMFITALLVYICIKFKKVNI"
     gene            13232..14131
                     /locus_tag="RJ336_000013"
     CDS             13232..14131
                     /locus_tag="RJ336_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane lipoprotein lipid attachment
                     site-containing protein"
                     /protein_id="HDZ5212500.1"
                     /translation="MKKYILLASSMLILAACGGTSSNFVNVSMPNFKPQVPTKVEPID
                     SGVSIALEPINIEQNNNYSDYFENSVLKIRIEKEIDLLKRNLEEQIKTIAQLKGYKIV
                     TTNPDYTLKSSISIYTEEKNAQKTSNFMSGDYVKSNLGINFKGKIDFIDAHNPQNSTN
                     LSSSTKLDSLVALNYPIKNDDGVNMFKTTISTVPTQLNKGLEQPAFEIDKSFLAFYKN
                     TLNTLYNNLPKATDIGKTIPNTNSGFNSFDGDATFEESLPQTNSNQNNTIENTPTQNI
                     PTNPSSTNQNNQSKNQDGVEIFE"
     gene            complement(14205..14993)
                     /locus_tag="RJ336_000014"
     CDS             complement(14205..14993)
                     /locus_tag="RJ336_000014"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDZ5212501.1"
                     /translation="MKFLAVIGDPISHSKSPRMHNNAINALGLDSIYTRYHLRNANCL
                     REDFFKLGLSGANITLPFKEKALDIADVKDDFARNIGSANTLCLKEDKIYAYNTDALG
                     FLEAIKDFDNIKKALILGAGGTALALAYALKQKGVEVYIANRSKERFKDFLAYPTYLY
                     KNLQDFDFDLVINSTSAGLKDENLPCDRELLDRILPKAKFAFEVIYGRETPFYRLCKE
                     YHLKIKDGLDMLLWQGVFAFELFFEIRDKREMIKNAMQQALILK"
     gene            complement(14990..15826)
                     /locus_tag="RJ336_000015"
     CDS             complement(14990..15826)
                     /locus_tag="RJ336_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HDZ5212502.1"
                     /translation="MENQKNEFDDIILEKSNKSEKVKKILLRVIALVILFLAIMIVMK
                     LINGSGDENTQNQSVLPSEPIATQDNNNDTSFESMPITDNTSAEDQFEALRKQFQDEQ
                     NTTQNTTTSSSNNNDTTNFAMPDQEVPAEPTATTSENTTPQASTPKQEVTQTAKPKEE
                     AKKQTAVKKEKESTKQIPKKEQNANDLFKNVDAKPVHPSGLASGIYVQIFSVSNLDQK
                     SKELASVKQKGYDYKLYKTTVGGKEITKVLIGPFEKADIAAELAKIRKDIAKDAFSFT
                     LK"
     gene            complement(15840..16385)
                     /locus_tag="RJ336_000016"
     CDS             complement(15840..16385)
                     /locus_tag="RJ336_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1882 domain-containing protein"
                     /protein_id="HDZ5212503.1"
                     /translation="MISPMDMSLIKIIGDHYYIRRDKIVNKITHRGRLFFDKFERVDA
                     PLNLNVMREHAAKKIVVAHDLITKDNKVENIVFDYNGFNAERFYHRAQLILREEGFIN
                     FTAYKTKTPGHLHLYIHKGHTALNEGYSLASKLSMMFASKMPVEWKVFPSMDVPREFN
                     ILILPYEVYQKERGSSWSKHM"
     gene            complement(16382..17626)
                     /locus_tag="RJ336_000017"
     CDS             complement(16382..17626)
                     /locus_tag="RJ336_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDZ5212504.1"
                     /translation="MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVIGS
                     ILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSGSQANQGVYA
                     ALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE
                     KPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPHAHVV
                     SSTTHKTLRGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDE
                     WKVYAKQVRTNAQVLANVLMDRKFKLVSNGTDNHLVLMSFLDREFSGKDADLALGNAG
                     ITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDINNEKLQ
                     ENIKQELKKLASNFIIYERAMF"
     gene            complement(17623..19128)
                     /gene="lysS"
                     /locus_tag="RJ336_000018"
     CDS             complement(17623..19128)
                     /gene="lysS"
                     /locus_tag="RJ336_000018"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDZ5212505.1"
                     /translation="MFDNILEQQRIEKAKELKNLGINPYPHFLEKEMSLKTFKDKFSY
                     ILEQVEKRDESVNAVVAGRLKLLRIAGKSIFANIEDEDTNLQIYFNKDSVGEELYAIL
                     KKNLEVGDIVLVKGFPFVTKTGEFSLHASEVKLATKAIVPLPEKYHGLTDIEQRYRKR
                     YVDMIMNAEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHN
                     SLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHN
                     YKDLMDLTEELFALLLDKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDLI
                     EDKEKILTKLKVDGFEANEKLELGHLQAELFDNYVEEKLINPTFVIDFPISISPLSRR
                     SDEDSQIAERFELFICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDF
                     VNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPAMRPLKSELKEKE"
     gene            complement(19129..19602)
                     /locus_tag="RJ336_000019"
     CDS             complement(19129..19602)
                     /locus_tag="RJ336_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDZ5212506.1"
                     /translation="MLIENVEYDVLLERFKKILRQGGLKYTKQREVLLKTLYHSDTHY
                     TPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTSISFGSAGKKYELANKPHHDH
                     MICKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCGDCNNQKAKVKI"
     gene            complement(19604..20167)
                     /locus_tag="RJ336_000020"
     CDS             complement(19604..20167)
                     /locus_tag="RJ336_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDZ5212507.1"
                     /translation="MNFYWFDAFILGFTLLLGLKGIINGLIKEIFGLLGIIGGVFIAS
                     KYATQAAEFIQSTFYKIENQSLAGFAGFLAILIIFWIVCLLAGNFLSKLIKLSGLGFL
                     DRIGGFIFGGAKIFLIFAILVFCVARIDFLNDKLDNFAKNSYTLNLLKETGSFIMNQP
                     LTENSLDHASEKLQDIVSDLNNTQKGE"
     gene            complement(20235..20519)
                     /gene="gatC"
                     /locus_tag="RJ336_000021"
     CDS             complement(20235..20519)
                     /gene="gatC"
                     /locus_tag="RJ336_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HDZ5212508.1"
                     /translation="MQIDEKLLSKLEKLSALQITKNRNETIVQLSEIVNFVEKLNELD
                     LDSQEITVSTIKGGAPLRIDEIRNSNVIDEVLDCAPKKQEHFFVVPKIIE"
     gene            20663..21241
                     /locus_tag="RJ336_000022"
     CDS             20663..21241
                     /locus_tag="RJ336_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212509.1"
                     /translation="MGLKDNLKAVKNELNTEEQFIENFIKGERFIRKYKFYISAVVII
                     LVAWFAGNFIISKINDYKTKEANEIYANLIQDPSNKNLLEQLKNKNTNLYAIFLLKEN
                     INDFNNTALQNELKQIYNNAQTNTLLKNIIALSLGDKSIFLKNYDKLLEAYKLLEQNK
                     IEEANVLLSQIKENSSLNQIAKNLKHYQGITQ"
     gene            21238..22236
                     /locus_tag="RJ336_000023"
     CDS             21238..22236
                     /locus_tag="RJ336_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212510.1"
                     /translation="MKKIFLTLFCLIFLCACGTKRQYFEPEQTNGDLSHNGNLKSKIV
                     DWNLVSAKLSNNTAILKNNISIDKFKLPKNYILIAYQDGEYFTADDNGNLKIFDNSYN
                     EIYNFQFDASVVGVASNGDDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANP
                     IFLDNIIVYPTLDGKILILSRNNLQVIKDVVISAENFFNNVIHLSVIGDKLIAATAKK
                     IIVVSPARTLYLDADIKDVALSDDGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFVKS
                     NIYNNYLYIFEKTGYLIKMNLNLDNTQVFKLSEAVDKISFMGNGKFYYGDKILDLL"
     gene            22233..22523
                     /locus_tag="RJ336_000024"
     CDS             22233..22523
                     /locus_tag="RJ336_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tram-like protein"
                     /protein_id="HDZ5212511.1"
                     /translation="MIKILEQTIKALKLNLKPYDLSMLTRKKSYICAKDQNNILFMYT
                     GKTKFLMKDALFLENLAQQININNKYFFSMASLCSKAKNHLEMKGFNIYVAL"
     gene            22510..23139
                     /locus_tag="RJ336_000025"
     CDS             22510..23139
                     /locus_tag="RJ336_000025"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HDZ5212512.1"
                     /translation="MLLCDIGNSNANFLDDNKYFTLSIDQFLEFKNEQKIFYINVNEH
                     LKEHLKNQKNFINLEPYFLFDTIYQGLGIDRIAACYTIEDGVVVDAGSAITIDIISNS
                     IHLGGFILPGIANYKKIYSHISPRLKSEFNTQVSLDAFPQKTMDALSYGVFKGIYLLI
                     KDAAQNKKLYFTGGDGQFLANYFDHAIYDKLLIFRGMKKIIKENPNLLY"
     gene            23258..24604
                     /locus_tag="RJ336_000026"
     CDS             23258..24604
                     /locus_tag="RJ336_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDZ5212513.1"
                     /translation="MSQQEFDVLVIGAGISGAALFYELARYTNIKNIALIEKYNTAAT
                     LNSKGTSNSQTIHCGDIETNYTLEKARKVKRTADMIVKYGLMQNAQNNFMFSHQKIAL
                     AVGDIECDYMKKRYEEFKELYPYIKFFDKAKIKQIEPKVVLGEDCNQDRPENICAMGV
                     ESGEVFTTVDFGKMSINLIEQAQKQNKNTFVAFNQEIVHIEKKDDIFILKTSNHQEYH
                     AKSVVVNAGAHSLYLAHKMNLGMDKSCWPVAGSFYLTKQKLLNGKVYMVQNPKLPFAA
                     LHGDPDLLADMNTRFGPTALVIPKLERYHGLKSVPEFFEALKLDKTVLKVTFNMFKDA
                     TIRNYIFYNYLFELPFIDKSLFVKDAKKIVPSLKTSDIYYAKGFGGVRPQVIDKTKGE
                     LMLGEASITETPGIIFNMTPSPGATSCLGNAERDAKLICNYLGMEFNEDKFSSELL"
     gene            24653..26095
                     /gene="pyk"
                     /locus_tag="RJ336_000027"
     CDS             24653..26095
                     /gene="pyk"
                     /locus_tag="RJ336_000027"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDZ5212514.1"
                     /translation="MLKKTKIVATVGPASEKEEILRQMIINGVNVFRLNFSHGTHEYH
                     KKNLDTIRRVAKELHTRIGILQDISGPKIRTGELKEPFELKKGDRLDFYRETILGEKI
                     AQNHYKISINQKSILDMLKIDEYIYLYDGSIRAKVVSIDNQKIETIIENDGFLNSNKG
                     INFPNTKINIDVITQKDKNDLLWGIKNEVDFLAISFVQNAHDIDEVREILAQNNAKIS
                     IFAKIEKFDAVENIDEIIKSSDGIMVARGDLGIEVPYYKVPNIQKEIIQKANNASKPV
                     ITATQMLFSLAKSKTATRAEISDVANAVLDGTDAVMLSEESAVGIDPANAVDIMCQTI
                     IETEKRYPYNKFNDFNDLDNTDKIMRSSAHLATDLNADAIFSLTSSGKSAIKIARYRP
                     NIEIIAVGHSEKTLNSLSIVWGVNPAILVNKSNELTELLKDSVRSSVEKGFMDEDKCY
                     LLTAGFPTGVEGTSNLIRILNKEQIAYYLQ"
     gene            26193..26828
                     /locus_tag="RJ336_000028"
     CDS             26193..26828
                     /locus_tag="RJ336_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212515.1"
                     /translation="MQVNTFSNIASMAQTQVSNKKADDAKENTKDKNVQSANSSKDVD
                     KNTLEKLNALGGKGITQIYLVQFQQQTMNAVIGSSNAQTGLDSLLNGANLDTAKSILT
                     NIDFASLGYSGKNPLDMNTDELQQLVSEDGFFGVENTANRIADFVIKGGGDDVEKLKK
                     GLEGMKKGFEQAEKMWGGELPQISQDTIDAALKKVSDRIDELGGKTLDLQA"
     gene            complement(26859..29321)
                     /gene="pflB"
                     /locus_tag="RJ336_000029"
                     /pseudo
     CDS             complement(26859..29321)
                     /gene="pflB"
                     /locus_tag="RJ336_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343827.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="motility protein PflB"
     gene            complement(29331..30566)
                     /gene="serS"
                     /locus_tag="RJ336_000030"
     CDS             complement(29331..30566)
                     /gene="serS"
                     /locus_tag="RJ336_000030"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDZ5212516.1"
                     /translation="MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTA
                     LEEFQAFQNKFSKELATAEDKESLKAKLSENKSKINEQSVKVNALENELEEIAHAIPN
                     IPDECVPVGEDEDENVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFC
                     VLKNEGALLSRALVNYMIDFNRSHGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDD
                     EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQF
                     EKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEV
                     WLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIME
                     NYQDKEGKIHIPDALKKYF"
     gene            complement(30577..31536)
                     /gene="trpS"
                     /locus_tag="RJ336_000031"
     CDS             complement(30577..31536)
                     /gene="trpS"
                     /locus_tag="RJ336_000031"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDZ5212517.1"
                     /translation="MRVLTGLQPSGDLHIGNYFGAIKQMVDAQEKSQMFMFIANYHAM
                     TSSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLE
                     RAHSYKDKVAKGLSASHGLFSYPVLMAADILLFDTQIVPVGKDQIQHVEIARDIALKV
                     NNEWGEIFTLPEAKVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKTLKKQISSIVTDS
                     TALEDPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKMYLNELVNAYFKE
                     AREKYNELLEKPSHLKEILDFGATKARKIAQEKMQKIYEKIGL"
     gene            complement(31533..32030)
                     /locus_tag="RJ336_000032"
     CDS             complement(31533..32030)
                     /locus_tag="RJ336_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HDZ5212518.1"
                     /translation="MMKAKNIVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFN
                     QKISEIFAQKGEIFFREQEQKMADFFSSCEKTCIATGGGFVNVSNLEKVGFCIYLKAS
                     FEYLKKRLDKDEISKRPLFYDEIKAKKLYNERLSKYELKANFILNIENKNIDELLSEI
                     KKVIK"
     gene            complement(32017..33399)
                     /gene="der"
                     /locus_tag="RJ336_000033"
     CDS             complement(32017..33399)
                     /gene="der"
                     /locus_tag="RJ336_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDZ5212519.1"
                     /translation="MQSIILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTQI
                     HIHSKKAMLIDSGGLDESDELFKNVKKNTLKVAKESDIILYLVDGKLAPDDEDRQFFY
                     SLKKLGKPIALVVNKVDNKKDEERAWEFANFGVKEIFNLSVTHNVGLDELYEWLEKFL
                     HEEFLIPDEEENLEDFLEHYEEGKEFQFKEVDQNHIRVGIVGRVNVGKSSLLNALVKQ
                     ERSVVSSIAGTTIDPVNESVVHKDKVIEFVDTAGIRKRGKIQGLERFALNRTEKILSH
                     SQIALLVLDAHEGFNELDERIAGLVAKHYLGVIIVLNKWDKSEMDFDKTVKELHLDRF
                     KFLAYAPVISVSALSGKRVHVLLDKILQIFENFTQKIQTSKLNTLIENATRSHPLPHD
                     YGKLVKIYYAVQYDLAPPKIALIMNRPKALHFSYKRYLQNQIRKEFNFEGVPLVIASR
                     KKGSKENDES"
     gene            33501..34433
                     /locus_tag="RJ336_000034"
     CDS             33501..34433
                     /locus_tag="RJ336_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDZ5212520.1"
                     /translation="MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFR
                     NIIGIFFIVYLLKRSKAHKEGGHFWLLVFRGVVGTLSLYMFFYNVSNITLGGAFAFQK
                     TAPIFITLIAFVVFKENIGIKGWIGILIAFGGVLLIAQPWAHNLNHSGFDLKNSVIGI
                     TSGFLAALALTSVRELRKSYTTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLD
                     FILAPFVMPSLTAWLIIAIMGTLGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMIV
                     GIILGDNLPSTMVFLGIIGIIFGGLILVKNKGKK"
     gene            34430..35245
                     /gene="kdsA"
                     /locus_tag="RJ336_000035"
     CDS             34430..35245
                     /gene="kdsA"
                     /locus_tag="RJ336_000035"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDZ5212521.1"
                     /translation="MKKMILIAGPCVIESKDLIFKVAEQLKNFNENPNIEFYFKSSFD
                     KANRTSINSFRGPGLEEGLKILQSVKDEFGMKILTDIHESNQAAAVSEVADVLQIPAF
                     LCRQTDLLVAAAKTKAKVNIKKGQFLNPSDIKYSVKKVLQTRGIEDEGYEAAQKNGVF
                     VAERGASFGYGNLVVDMRSLVIMREFAPVIFDATHSVQMPGAAGGSSGGKSEFVEPLA
                     RAAAAVGIDGFFFETHINPCEALCDGPNMLNLTRLKNCVNTLLEIQNIIKENK"
     gene            35242..35706
                     /locus_tag="RJ336_000036"
     CDS             35242..35706
                     /locus_tag="RJ336_000036"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDZ5212522.1"
                     /translation="MNIIEGKLNLDSNTKIAIINARFNHIITDRLVEGAKDAFLRHGG
                     KEENLSLILVPGAFELPYALKKAIESKKFDAICCVGAVIRGSTPHFDYVSAETTKGIA
                     NVSLNHNIPVSFGVLTTDTIEQAIERAGSKAGNKGFEAMTTVIEMLNLSKEL"
     gene            35706..36104
                     /gene="nusB"
                     /locus_tag="RJ336_000037"
     CDS             35706..36104
                     /gene="nusB"
                     /locus_tag="RJ336_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDZ5212523.1"
                     /translation="MATRHQVRQSVISLLYAFELNSQNNVFVDEILDEKKIRNEQKNF
                     TLNLYHGILDNLNNIDETLNSFLNDNQITALGHVERAILRLGAYELLFTDTPSAIVIN
                     EAIELAKELANDNSPKFINGVLDALIKAKK"
     gene            36101..36781
                     /gene="pyrF"
                     /locus_tag="RJ336_000038"
     CDS             36101..36781
                     /gene="pyrF"
                     /locus_tag="RJ336_000038"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDZ5212524.1"
                     /translation="MKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFI
                     EELKKVDDFKIFLDLKIHDIPNTMADACEEISKLGVDMINIHASAGKIAMQEVMTRLS
                     KFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVFESKI
                     IKEHTQRNFLTLTPGIRPFGEKNDDQKRVANLTMARENLSDFIVVGRPIYKDNNPRKI
                     CEKILQEI"
     gene            36836..37729
                     /gene="msrP"
                     /locus_tag="RJ336_000039"
     CDS             36836..37729
                     /gene="msrP"
                     /locus_tag="RJ336_000039"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HDZ5212525.1"
                     /translation="MIITPENLYKKRRDFLKLGAGALISSSVLASKLSALNFTSDTNP
                     NKLEISDEELATNYVNFYEFSTDKKKAVSLAQNFNTQNWKIDISGEIEKPLTLSMEDI
                     LKFSLEERIYRFRCVETWSMVVPWVGFELRRLIEMAKPTSEAKFVKFTTLLDKSQFPD
                     QDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSI
                     KSIVKIEFTKEQPKSTWESYAPSEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLM
                     FNGYEKEVASLYKNMDLKVNF"
     gene            37729..38301
                     /locus_tag="RJ336_000040"
     CDS             37729..38301
                     /locus_tag="RJ336_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase heme-binding subunit YedZ"
                     /protein_id="HDZ5212526.1"
                     /translation="MRTKYFKFLAYFSFIISLIYGFYHIIKAFDFVKEAYIYTGIFAL
                     IFLNLSLLFSLLKFKKTKNYPKILGIFAAFWAILHFLNYFIFDRNAQISRLFDDISHR
                     LLEASGFIAFLIIFLMLLSSFEIFKKLSKIRKLGYLCLVLASYHYFLTPKVPMFWEWS
                     ALIVALFYFIVRYTKTLKKLKSNNLTFIKT"
     gene            complement(38266..39978)
                     /locus_tag="RJ336_000041"
     CDS             complement(38266..39978)
                     /locus_tag="RJ336_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ5212527.1"
                     /translation="MEKLKNFLSLKNIEDTQIYKELKCAKNEALILRELCRNYVVSIS
                     SINAFTLLSTIFGNDKYLYLDALEDLKKLIERGFVNQNSSFFKSLENNKTQTLTLALL
                     QSELSLSEYFLEFLEAKPRLNFEKQEAYADYLEYLKDEFVRIQLYERLSFIQKSAYNS
                     EIKNQIKLYEKHIKERLKKSKFYNVLADIFKEYNLEHKEQIIFLALLKEEYALSNESS
                     ISREMNSLLSLISENDLERHKNKKLLQENAPLLNLIEYDEYLNAFGDISKSFFIIDEI
                     LQRIINFEPKQSKKIKIESVLKDQDIFELIEPSTDINDIIMPENTKELLENILKQQDK
                     KVLERLHSWGIKSNKNIEAKIIFYGPAGTGKTMSALAMAKSMKKSVLSFDCSKILSKW
                     VGESEQNVRKIFDTYKNIVQTCKQSPILLLNEADQFLSTRVDGSSGSDKMHNQMQNIF
                     LEQIERFSGVIIATTNFLESLDSAFSRRFDYKIEFKKPDFKDRLKIWEKFLPKKALFE
                     KDFDINILSNYELSGAQILMVVKNTALKVAVSQDGVFKMQDFIESIQKELNSSFDKSK
                     IVGF"
     gene            complement(39978..40802)
                     /locus_tag="RJ336_000042"
     CDS             complement(39978..40802)
                     /locus_tag="RJ336_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212528.1"
                     /translation="MKFFLLVFCFVNLALAQVYKGELYFYHLQDKEIFAIVYDNAPMT
                     PLFDRDKNQTSSSFLIVDDINGNLEIPLVKTNDFWQDERKKYKINSSKMLTYDNKNFQ
                     GENLGTTTLELVETQDGIRIKRSLDFIGFNDDFKEFHPVHKGVFSFEQIRQKPIFLQD
                     GKISFEEWYYFYEDGMSRAILELNNFVYDINAHAFVKLNDLYNTENQKFQNLLHEKLK
                     NTCDECFEDLQNLQFNNNFLLNNGKLKICYLPFEGHFLDENICVEFNEDELKEFKK"
     gene            complement(40813..41289)
                     /locus_tag="RJ336_000043"
     CDS             complement(40813..41289)
                     /locus_tag="RJ336_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212529.1"
                     /translation="MKHCLALCFIFFLCACSVKNQNFSSQSLMVLIASPMIKINDAAF
                     LKKENNALNLEVYKLGQAFFELKIKDKICINAVCYDKKVFNQKFFKNVYYDDILSDIL
                     KANALWQGKNLEKTDCGFEQNLKAKNYEIFYQVCDNKVSFFDKISHTKIILTHIQN"
     gene            complement(41298..41789)
                     /locus_tag="RJ336_000044"
     CDS             complement(41298..41789)
                     /locus_tag="RJ336_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HDZ5212530.1"
                     /translation="MASEHSFDISAALDKQELKNAFEQAKKELDSRYDLKGIKCEIDL
                     SEKESIFKLSSSSEGKLDVLKDIVISKLIKRGINPNAIKELSRESGAMFRLNLKANDA
                     IDSENAKKINKAIKDSKLKVNSSIRGEEIRVVAKQIDDLQAVMKLVKELDLELNISFK
                     NLK"
     gene            complement(41779..42714)
                     /locus_tag="RJ336_000045"
     CDS             complement(41779..42714)
                     /locus_tag="RJ336_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HDZ5212531.1"
                     /translation="MKIVCLDAATLGDYDLSIFEKFGSLQIYTTTNKEQTIERLKDAN
                     VAMTNKVVIDKDVIDACKNLKLILETATGINNIDIEYAKEKGIIVKNAAGYSTMSVVQ
                     HTFAFMFAFLNQIPYYDKWSKEGKWCESPIFTDYSRILNTLSGKKHGIIGLGSIGKEV
                     AKISKAFGAEIYYYSTSGANKNADFVHLELKDLLKTCDIISIHAPLNEKTKNLLAFEE
                     LKHLKDNAILINVGRGGIVNENDLAKIIDEKNIRVGLDVLEIEPMMKNHPLLSIKNKE
                     NLIITPHVAWASKEALNALMDIVYNNLKEWIENGK"
     gene            complement(42717..43886)
                     /locus_tag="RJ336_000046"
     CDS             complement(42717..43886)
                     /locus_tag="RJ336_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HDZ5212532.1"
                     /translation="MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISNKLVCVKESEAN
                     AYYEAVNELYDMFIAAAQEVIDNDRFDELGIPFNLIDAIKMSWENEVHWHLYGRFDLA
                     GGLDGKPIKLIEFNADTPTALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLI
                     TLDESVEGFEEHYQGWKILFSSVAGSKEEEITTKLLSHIANEAGFQTNFSFVDEVEFS
                     EEGVFKEGENYEYWFKLIPWEDIAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKG
                     ILKILWELYPNHPLLLETKDTPLEGKNYVKKPVFGREGANISIIKDGKTLHENVGPYG
                     NNKVIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD"
     gene            complement(43896..44501)
                     /locus_tag="RJ336_000047"
     CDS             complement(43896..44501)
                     /locus_tag="RJ336_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0323 family lipoprotein"
                     /protein_id="HDZ5212533.1"
                     /translation="MKKIKKIIQIGMIGGLAAVAGGALAGCGSNNDNADTLNQAANAQ
                     GAFVIIEETAPGQYKIKDQYPSDETRVVLKDLNGTERILSKEEMDALIKEEAAKIDNG
                     TSNLTKDNGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA
                     YQRSVNSFNKAGTTSSTSSAKKSGFFGGGSKAASSSSSFGS"
     gene            complement(44624..44836)
                     /locus_tag="RJ336_000048"
     CDS             complement(44624..44836)
                     /locus_tag="RJ336_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDZ5212534.1"
                     /translation="MPGIKVHPNESFDEAYRKFKKQVDRNLVVTEVRARRFFEPMTEI
                     RKKQKISARKKMLKRLYMLRRYESRL"
     gene            44996..46372
                     /gene="ccoG"
                     /locus_tag="RJ336_000049"
     CDS             44996..46372
                     /gene="ccoG"
                     /locus_tag="RJ336_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HDZ5212535.1"
                     /translation="MQGHITNYTKKRYFVYLIASIIIFALPFIRINENHFFLLSFDHS
                     KLNLFFISFSTQEFYLMPFVLIFLFLFIFFITTLGGRIWCAWSCPQTIFRVIYRDIIQ
                     TKFLKIRKNINNKQKEYGGQYFKKFLGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQN
                     PGEHLLLLGILFCASLLFTLDITYLQEKFCVYVCPYARIQSVMFDHDTMQVIYDEKRG
                     GLIYDGHTKLHKKPPEGECIGCEACVSICPTHIDIRKGMQLECINCLECADACSKVQS
                     KFNRPSLINWTSAKAIETRSKVHYLRFRTIAYFIVLLIALLALIIMGSKKESMLLNIN
                     RSSELYNISNVKGELVISNAYTFLFQNTDSKPHEYYFTANLEGINDGIEIIRPNKPFK
                     LKAGEQVKKIVVIRATKNLANNDKKDVIFPLHIKAYAKDNEKISVFRKSIFVYPKSTL
                     IKDKNELK"
     gene            46359..46991
                     /gene="cmeR"
                     /locus_tag="RJ336_000050"
     CDS             46359..46991
                     /gene="cmeR"
                     /locus_tag="RJ336_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     regulator CmeR"
                     /protein_id="HDZ5212536.1"
                     /translation="MNSNRTPSQKVLARQEKIKAVALELFLTKGYQETSLSDIIKLSG
                     GSYSNIYDGFKSKEGLFFEILDDICKKHFHLIYSKTQEIENGTLKEILTSFGLAFIEI
                     FNQPEAVAFGKIIYSQVYDKDRHLANWIENNQQNFSYNILMDFFKQQNNSYMKKNAEK
                     LAVLFCTMLKEPYHHLNVLINAPLKNKKEQKEHVEFVVNVFLNGINGSKA"
     gene            47085..48188
                     /gene="cmeA"
                     /locus_tag="RJ336_000051"
     CDS             47085..48188
                     /gene="cmeA"
                     /locus_tag="RJ336_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeA"
                     /protein_id="HDZ5212537.1"
                     /translation="MKLFQKNTILALGVVLLLTACSKEEAPKIQMPPQPVTTMSAKSE
                     DLPLSFTYPAKLVSDYDVIIKPQVSGVIVNKLFKAGDKVKKGQTLFIIEQDKFKASVD
                     SAYGQALMARATFENASKDFNRSKALFSKNAISQKEYDSSLATFNNSKASLASARAQL
                     ANARIDLDHTEIKAPFDGTVGDALVNIGDYVSASTTELVRVTNLNPIYADFFISDTDK
                     LNLVRNTQSGKWDLDSIHANLNLNGETIQGKLYFIDSVIDANSGTVKAKAVFDNNNST
                     LLPGAFATITSEGFIQKNGFKVPQIAVKQDQNDVYVLLVKNGKVEKSSVHISYQNNEY
                     AIIDKGLQNGDKIILDNFKKIQVGSEVKEIGAQ"
     gene            48188..51310
                     /gene="cmeB"
                     /locus_tag="RJ336_000052"
     CDS             48188..51310
                     /gene="cmeB"
                     /locus_tag="RJ336_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeB"
                     /protein_id="HDZ5212538.1"
                     /translation="MFSKFFIERPVFASVVAIIISLAGVISLTNLPIEQYPSLTPPTV
                     KVSATYTGADAQTIASTVASPIEDAINGADNMIYMDSTSSSSGTMSLTVYFDIGTDPD
                     QATIDVNNRISAATAKMPDAVKKLGVTVRKTSSTTLAAISMYSSDGSMSAVDVYNYIT
                     LNVLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYAT
                     GKIGEEPVTQKSPYVYSITMQGRLQNPSEFENIILRTNDDGSFLRLKDVADVEIGSQQ
                     YSSQGRLNGNDAVPIMINLQSGANALHTAELVQAKMQELSKNFPKGLTYKIPYDTTKF
                     VIESIKEVVKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSI
                     NLLTLFALVLAIGIVVDDAIIVVENIDRILHENEQINVKDAAIQAMQEVSSPVISIVL
                     VLCAVFVPVSFISGFVGEIQRQFALTLAISVTISGFVALTLTPSLCALFLRRNEGEPF
                     KFVKKFNDFFDWSTSVFSAGVAYILKRTIRFVLIFCIMLGAIFYLNKAVPNSLVPEED
                     QGLMISIINLPSASALHRTISEVDHISQEVLKTNGVKDAMAMIGFDLFTSSLKENAAA
                     MFIGLQDWKDRNVSADQIIAELNKKFAFDRNASSVFIGLPPIPGLSITGGFEMYVQNK
                     SGKSYDEIQKDVNKLVAAANQRKELSRVRTTLDTTFPQYKLIIDRDKLKHYNLNMQDV
                     FNTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDALKNIFVRSNDGKMIPLDSF
                     LTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKETLGDDYSIAWSG
                     SAYQEVSSKGTASYAFALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLR
                     GFSNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKGVFEAAVAAAKLRFRPIIM
                     TSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENFNEW
                     LDKKRGKVHE"
     gene            51303..52781
                     /gene="cmeC"
                     /locus_tag="RJ336_000053"
     CDS             51303..52781
                     /gene="cmeC"
                     /locus_tag="RJ336_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit CmeC"
                     /protein_id="HDZ5212539.1"
                     /translation="MNKIISISAIASFTLLISACSLSPNLNIPEANYSIDNKLGALSW
                     EKENNSSITKNWWKDFDDENLNKVVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLP
                     KFDGSASGSRAKTAINAPSNRTGEVSYGNDFKMGLNLSYEIDLWGKYRDTYRASKSSF
                     KASEYDYEAARLSVISNTVQTYFNLVNAYENENALKEAYESAKEIYRINDEKFQVGAV
                     GEYELAQARANLESMALQYNEAKLNKENYLKALKILTSNDLNDILYKNQSYQVFNLKE
                     FDIPTGISSTILLQRPDIGSSLEKLTQQNYLVGVARTAFLPSLSLTGLLGFESGDLDT
                     LVKGGSKTWNIGGNFTLPIFHWGEIYQNVNLAKLNKDEAFVNYQNTLITAFGEIRYAL
                     VARKTIRLQYDNAQASEQSYKRIYEIAKERYDIGEMSLQDYLEARQNWLNAAVAFNNT
                     KYSYANSIVDVIKAFGGGFEQSEDTSKNIKEESKNLDMSFRE"
     gene            complement(52804..53055)
                     /locus_tag="RJ336_000054"
     CDS             complement(52804..53055)
                     /locus_tag="RJ336_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212540.1"
                     /translation="MDKAKIVQNLNALFKQRAEFYSYFDENIAKINNTEVFDFKNAKN
                     LNPEEVYKQFYHFDYAIRKLLPAIYKAYEITDADLDKDF"
     gene            53183..54529
                     /locus_tag="RJ336_000055"
     CDS             53183..54529
                     /locus_tag="RJ336_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HDZ5212541.1"
                     /translation="MNLFQNLALKYSHTMMEKSLQKGFNVELLKQPKEKIPKQDKSYM
                     LYAHVPFCHTFCPYCSFHKYYYDENLAKVYFQNLREEIKIMKDKGFDFSSMYVGGGTT
                     LINEEELLKTLELCKKLFNIKEISCESDPNHIDPNKLSMFKGIIDRLSCGIQSFDDET
                     LKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLLNDLEIAKNLAP
                     QQITTYPLMKSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYTQNNGWSFSLEKNK
                     LNDEYVSSHHEYLGVGSGAFSFLDGELLINAFNLNDYAKFIQEKQNANIAKACFDKKE
                     IIKYIFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSGAIIKDQNALIATEFG
                     QYLFVVLMKDFYTGMDLVRAVFRDDKRLKNKDYIDIMKENIDPLNSASMEFKAETN"
     gene            complement(54526..54978)
                     /gene="hemJ"
                     /locus_tag="RJ336_000056"
     CDS             complement(54526..54978)
                     /gene="hemJ"
                     /locus_tag="RJ336_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HDZ5212542.1"
                     /translation="MTEWINDYYFWIKWVHYLAFVSWMAGLFYLPRLFVYHAEHKDNK
                     GFVEIVKIQERKLYFYIQTPAMIVTLITGSLMLHAHKEVLMVGAGFMHVKLTCVTLLI
                     IFHIHNYYCLKALANDTSAKSGKYFRIYNEFPTIMFIIIALMMVIRPF"
     gene            complement(54962..55432)
                     /locus_tag="RJ336_000057"
     CDS             complement(54962..55432)
                     /locus_tag="RJ336_000057"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HDZ5212543.1"
                     /translation="MAKTFKFIFYFWGAFVLVFVLDQWVKSLTLAGLRWQSEYLDLTY
                     ALNTGVAFSMLSFLEHNLKYLHLALIVVLFIYLFWQKTLLKTHSIAFGMMLGAGVSNL
                     LDRFIHGGVVDMFFWHKWFNFAIFNVADVMINISVALILIQEIFKKRKKDDRMD"
     gene            complement(55425..56762)
                     /locus_tag="RJ336_000058"
     CDS             complement(55425..56762)
                     /locus_tag="RJ336_000058"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDZ5212544.1"
                     /translation="MKLFGTDGVRGKAGEFLDSFLAMRLAMAAGIYFKDKSITNNILV
                     GKDTRRSGYMIENAIVSGLTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNP
                     YYDNGIKFFDAHGNKLSEDIEKKIEEIYFDDKLIQASKVDMEKIGQAKRIDDVIGRYI
                     VSIKNSFPKDLTLKSLRVVLDVAHGAAYKVAPTVFKELGAEVIVMSDKPNGLNINENC
                     GALHPANLAAEVKRLRADVGFAFDGDADRLVVVDEKGEVANGDSLLGVLALYLKEQGK
                     LQSSVVATIMSNGALKEFLNKHGIELDTCNVGDKYVLEKLKANGGNFGGEQSGHIIFS
                     DYAKTGDGLIAALQFSALMLSKKKSASSILGQVKPYPQLLTNLKIAEKKDLDKIKGLK
                     ELKKDLENKNINTLFRYSGTENLIRLLLEAKDIKLLEKEMKNVVEFFKKALNG"
     gene            complement(56856..57881)
                     /locus_tag="RJ336_000059"
     CDS             complement(56856..57881)
                     /locus_tag="RJ336_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HDZ5212545.1"
                     /translation="MKVKSLLIASLVAFSSLNAASLIDEAKNSGLVALPKDQKGVDEI
                     LKQNGVKASEFTLEKAELGKKLYFEPRLSKSGIISCNTCHNVGLGGTDGISTAIGHKW
                     TANPHHLNSPTVYNAVLNNTQFWDGRAGTLADQAKGPIQADPEMATPAKLAVEKISSL
                     PEYVSEFKKIYGKSGVNFDNIADAIANFERTLITPSRFDKFLEGDEKALTKEEQKGLK
                     LFIDKGCVACHNGVNLGGNMQAFEVAGKYKFANLGDFKGDANGMVKTPTLRNVAETAP
                     YFHNGAIWNLKDAIKEMGSVQLGIKISDKEAKSIETFLKSLTGTKPAIVYPQLPISTE
                     KTPKPEL"
BASE COUNT        20125 a         9904 c         7760 g        20116 t
ORIGIN      
        1 ttctttataa atttctttag taaaaatttt aagccaaggc acttgagcct cctctttctc
       61 tatataaatc aaatcatttt cataaatcat tacattcctt tgaaattgta tttatgatta
      121 ttttacaaaa tttatcaaat ttttaagtca aaatgcgtta aaattcctaa aatttaaaaa
      181 acaaaaagga ggataaatgc aaattagttc aagttataac tcttatgatt actactctag
      241 caaaccttct tttgataaaa caaatcaatc tgattccact caaaaagatg aaaaaaatct
      301 tagcgaaaat aaagatgata aagaaaaaaa tggcgaacaa acccaaatgg ttaatggcgt
      361 agagctaagc caaaaagaag tagctcaagt tcgcgaactc caaagtatcg atagaaatgt
      421 aaaagctcat gaagctgcac atcaagcagc gggcggcggc ttagcaggtg ctgcaagttt
      481 tacttacaca agaggccctg ataatcaaat gtatgctaca gcgggcgaag ttcctatcag
      541 catgcaaaaa ggaaacacac cagaagaaac tatagccaat gcaagacaaa tcgcagcagc
      601 agctatggct cctgctgatc ctagcccaca agactataaa gttgcagcaa atgctacaaa
      661 aatggaattt gaagcaagag ctgaagcaat gaaacttaaa gccgaagaag ccaaagaaaa
      721 agaagaagaa aataaagaaa aagatgacaa aaattcagaa aatagcttag aaaaaacaga
      781 taaagattca aaaaacaacg ataaaaattc aaattttgat aaagacttta aaaattttgt
      841 cgctagaact tatcaacaaa actcgcaaaa taacgacatt aaattcaata tcgcatctta
      901 aaattcttag atttaaataa aaaatttacg ccaatcttcc ttataaataa agctttttta
      961 aagctaaacg gacatgtcta aaaatttatc ttttttatta tctgctttat ctgtatttgt
     1021 agaattactt tgctcttctt ttttggcttc tacttttttt gtatcttctt gctgttccat
     1081 aagctttaaa gtatcatata tttaatgaac ttccttaggc atacatttat ggaaacgatg
     1141 acttgaattt gcatgtaaaa tatttaacat tttttatcct ttttataatt taaatttttg
     1201 cattttcaat actttcatct ctaattttag taagtgtctg caggggatta tttccaaaat
     1261 atctattaaa agaacttaaa gtaatcatct tgcataccac cctccaagag cagactacat
     1321 ttgccttttt gtataattgt agtttgaata agaatttata ccattaatca tttttgcttt
     1381 ccttgatatt atatactata tcggaagaaa attaaaaatt tataatcttg agagttttca
     1441 aaaactctca agttattatc aagctaagct ttttccactt ttatgatatt ttaaaatacc
     1501 ttcagcacag cgataagcca aagctcccac agtatcagtt ggattatatc cactattgtg
     1561 ttggaaattt cctgctccta caacaaaaag attatccgca tcccagtgtt gtaaataagt
     1621 attaaccaca ctagtttctc tatctgcgcc catggttgtt ccacctgtgt tatgagtaga
     1681 ttgataaggc acaacgctat aatccttaag ataagcacct tttttgattg attttactcc
     1741 ttgcattctt tttgctacct cagctgtttt atctgtgata aatttatgca aagctctatc
     1801 ttgatcggtg aaattataag ttaagcgtaa aagtggcata ccaaaagcat ctttataagt
     1861 tggatcaaga cttaaataat tattcttatg aggcaaagaa gcaccttgcc ctcctactgt
     1921 aatagctctt gtgaaattat agtttaatgc ttttttaaat tcggcacccc aagttggagc
     1981 tcctgctgga agtggggctg attgtatagg gcgagttcca agctgaacgc tataaatcat
     2041 agctccatga aggaattttt ccttagaatg atcaaaatta tctccgttaa aatcatcact
     2101 cgtagttcct aaagcacctg aacccataaa ggtgttaaat tgctcatcaa agaaagctgt
     2161 tgtgcccata ttcatttggt aacaataatt tctacctaaa gttcctttac ctgtttttgg
     2221 atcgtattgc tcgcctatgt tgcttaccat taaaagctta gcattgttaa acatataact
     2281 tgtaagtaca actatatcag caggctggat atactctttc atcgttctag tatcgacaaa
     2341 ttttaccccc gttacttttc cgtctttttt aagaatttgc gttacattgc tataagtgcg
     2401 tatggtgtat ttacctgtgc tcatagcctt tggaattact gtgtttaaag gacttgcttt
     2461 tgcgccatac tcacaaccaa aacgctcaca atacgcacag tattgacaag gagctaaatc
     2521 ttgaccatca gggtttgtat agccaccttt agaatttgaa gctggcaaac gataagtgtg
     2581 taaatttgaa ctttttgctg cactttcaaa tcgtttaagc attttagtat tttcaagagg
     2641 ttcttgtgga taagaactgg atctaaaagc tcccattttt tccgctaaag gatttggttc
     2701 acctgatacc ccgcaggttt tttcaaatct atcataataa ggctccatat ccttataagt
     2761 cacgccccaa tcttgcaagg tataatcatt acctaattta ttaccatatc tttgtttgct
     2821 tagggtttga atttcaaagt cataaggcat aaacctaaaa gtccaaccat tccaatgcac
     2881 ccctgcaccg ccaacattat tacccaataa aaacgaaccc attttacgat aaggcaaggc
     2941 taaaccacta ggatcatgac gaaaagtcac agtgtctttt gagcaatctt gcatcaaacc
     3001 ataattaatc ccgtatctcc actcatcatg gataaaatta aaattttcag tactttgcat
     3061 atgtccgcgt tctaaactaa gtacattcaa acctgcttta gtaagctctg cagccactat
     3121 acctccagtc catcctgctc caactgttac cacatctact ttttttaata cttcagccat
     3181 tttaactctc catatctgct aaactcatag gttcaatgtt aaaaaattca tcacttgcaa
     3241 ttttatccac atagctcatt tgtgcacctg gatattgcat cattctccaa ccatttttat
     3301 tatcatttcc gccataaatt ggatcagcta aaactccagc tactgtcata tctcttaaaa
     3361 gtgtgaaaaa ataagaagat ttaaaacctg tagtttgaat ttttcctttt tcaaaatcgc
     3421 ttaaaatttt atcctgatct ccacctttaa gcaaagaaaa agatttttta taacgctttt
     3481 gagcattttc ttcaagagca tgcacacctt ctaaaaaaat atctttgcgt tgcataggag
     3541 tttgatagcc ttgttcggct ttgccctcca tgaaaggccc ttgcatatat tctctatcat
     3601 tataaccata agcactagct agctgattat caataaaata aggcacgcct aaacctatag
     3661 ctccttctcc ttgctcatct ttaggataaa ttctttcaca ggctgcactt aaggtatcaa
     3721 attcagtttg agtttgaaaa aacattctac ctctaacttt atttgatttc ccttgtgaag
     3781 cttgatgcga atgcgtaagt tctgctgcct ttaaaacagc accgccacct atagtgctag
     3841 ctgctactac agaaccacct agaagcccta gtttaaaaaa gcttctgcga tcaataatat
     3901 tgtcttgcat tacttctcct tgataataat ttaaacaaga ctatattagt cctattaata
     3961 taaatttaac tttaaaaagc gataaatttt gtgttattct taattttatt taagtatatc
     4021 tttgaaagta atgaaaatag aacttttaat aaagctctat atctttagaa ttaagttctt
     4081 tataagctgc gcaagcttct tgatgttttt gatcgcaagc cattccaaaa tatctttttg
     4141 cctttgttag atcttgtttt tctagttgat tatagcgtcc tagcaaataa caagcctcac
     4201 caaaacctaa agtgcaagat ttagaataaa aagcaagagc agattttaca cttgctttaa
     4261 caagttctcc tttatcatat aaagatccta actgataaca agctcttgca ttttttaagt
     4321 cacaagatct tttataaaaa cttgaggcca tttgtccatc tttttctttt tcataaaata
     4381 aagctatatt attacaactt aacgattctc ctaaagtgca agctttatta aaagccaaaa
     4441 gagcttcatt tttataacct tgattttgca aaagcaaagc catattagaa cacgcatttg
     4501 ctaaacccaa tttacaagct ttatcataaa atttataagc ttgatttaaa tccttactca
     4561 cacccttagc actttcatgc ataaaagcta aagaaaaaca agctttagaa atatcttttt
     4621 cacaaagatt cttaaaaatt tcataagctt tatcaaattt atttgcctcg taaagtttta
     4681 aaccctcttc taattcactt aatgcaaata atgaattaaa aaataaaaat aaagctaaaa
     4741 atattctcat taatcttcct ttatactttc tctaacattt aaaatctgcg ctcttctttt
     4801 ttgaagttct gcttttttaa gatctaaaaa tttatttttt tcttggatta aattttgact
     4861 ttgttctaag aaattttttg caatttttgt caaaataggc ttattaataa gcaaagcttc
     4921 aaactcataa acatttaatt catttaaaac tctttcataa atttcacttt ttttgggata
     4981 aaaaagtaca aattcagaac tatcaagctc ataaagaaca cggctttcat tgattttacg
     5041 actaaaaaat gcaaggctta gtttcgtagc attttcataa tttgtaaaag ctttaagatt
     5101 taatttttca aaaaataaat caagctctaa aatactttta aataaaagct ccttaaaatc
     5161 tttcaaaaag tactcatcgc ttgcattgca aaaagccctt aattcgctaa aatttttatc
     5221 actttggaaa atgtgatctt tttgtatgtt tgaaaattct gctttaaaaa gcaaaatttc
     5281 tctttcaagt atgtttataa aatcttttaa tttcatctta atttcttcaa aagatttata
     5341 aagttcattt ttgatttttt taaactcttt actcatcaca tcactattat aaaacatcgc
     5401 caaaaaagca tcgtcacttg aaatataagg cgctttataa tcatatcttg tatataaatc
     5461 tttctttaaa aatcctttgc tttctttgta aaaataagca tctttttcct taacacttgc
     5521 aaaaatttca ctagaaattc tttcgctaat gcttttaagc tgttctaaaa tctgatgatt
     5581 taaaatttca atctctttta aaaaattttc atacgctaaa agtaaatgct tttcataatt
     5641 ttgaaattga tttaataaac gatcaaaaat acctacaaaa agttgatttt catcttctaa
     5701 aatttcgcat aaatttaaaa tttttctttt aacaaatttt tcttttaaag ctgttgtatc
     5761 tagctgagtt aaaaaatcaa gcaaagattg aaaattagat ttttcatagc tttgctcatc
     5821 tttagcttct ttgcaagaaa tagcaataag ctcattaaaa tattttaaaa acacactttt
     5881 tgcataattt aaaacattat ctagttcttc tgtgcttaat ttatcttttt gatttaatac
     5941 acaaatgcta ttttctccta aaagttccaa atttgctttt atggcatctt cttcactttt
     6001 tttacctgca ttatcaatca aacttaacca aatcgcccca tgaatatttt taagctcatc
     6061 aagagttgtt aaagtatcat tttcatttgc atttaaacct ggagtatcta caagagtaat
     6121 tttttcaagt aaaggaatag gtgcaaaaat atgcaaactt tttgcttgtt ttacttcatt
     6181 tctttgatcc gtataaaagg ctaatttttc tatatttgtg ataatatcac ttccatcttc
     6241 aaattctact cttaaaaaat attcttttgc atagcgtaaa aaagtaggtt taaaagtaac
     6301 aggaacaaca cccgtaggca aacaatcaca ccctaatatc aaatttagca aacttgattt
     6361 accacttgaa aactgcccta taatagcgat attaacattc ttatccaaag aaaacacaag
     6421 ctcttttaat tcattttcta aagcataact tgcgtgcata aaaggctcgt taagttcctt
     6481 acaaagctct tgaatacgcc ctttaaaact atcatcaaaa ctcacactat aggtattttc
     6541 ataggctttt ataaaatcat ttaaaagatt aatctgcatt taaaagcccc atttcaagtt
     6601 gttttaattt ttcaattttt tctaaatttt cttcaaaaga atttaaaata ttagcatctt
     6661 gatttttcag actctgtaaa actttttcaa gactttctaa ttttgatttt tgattttttt
     6721 cataatgttt taatttatca tttaaaaact caaaaaatgc tccattgata tttaaagagt
     6781 ttaaaatttc gctcatttta aattctttaa aagtatcaaa aataaccgta tctaaattcg
     6841 tttcaagctc atataaatct gattttagat tgcttaattt ttcaattttc aatcttaaaa
     6901 gtgcaaattt ttcgctttga aaaatactat ctatattttt tgaaattcca tctttaaaac
     6961 cttcaaaacc attgtcaaaa tcatctttta aaaaatcata ttttaaagat aaatttgttt
     7021 taagctcctc gattttttta atattttcaa atttaatttc tcttaaaata tcattaatcc
     7081 catctttcgt ggtaatatca actatattta aaatacgaga aagattaagc ttttgtgcat
     7141 tatttttcaa atatttaaac tcatctatca agcgttcttt taatttttta accaaaagta
     7201 aaacaagatt atctatgcca ctatctatat ttttaagttt tgcaacggaa tttgaaattt
     7261 catcttgtgc ttcttttaat aaggtgtttt gcttttgaag ttcaagtaaa agcttttgat
     7321 tttcttcact tacaccttgt ttattctcct taataagacg attttgcatt tcatattcgc
     7381 ttagaatatt tttaagctct aaatgcaatt cttttttgta agctcttaag gcaatcttac
     7441 ttttttctcc tgcgtaaagc tcgttaaaaa gatagttttc aaattcttgc ataccacttt
     7501 tttgcaaact ttccttaggc gctaaactct tataaaaatc acttgccatt ttagcactca
     7561 cacataaaaa atcaatcttt tccaccaaat tttcatctaa atccacaagt cttgatttta
     7621 agctttcttt ggtataaaca atgacttctt ctaaatcctt tttgcttaac aaatccgctt
     7681 tagttaaaac aattaaaaac ttactcagcc ttgaatttaa aagacaatgc accaaaaagt
     7741 ctgcatcttt ttgagtcaag ctttgagaag cattcattaa atgaattaaa aaatcacttt
     7801 ctctaagata ctcatttgta acaatttctc tttgaactac aacatcatca agccctggag
     7861 tatcaactat ggaaatatta ttttttaaaa aatctaaatg acttttaatt tctatttttt
     7921 taattaaagc tgaaatttta tttttagctg aactgaaatt tttaagctcg caaagtgcga
     7981 tattttgtat taaaggttta tctttgataa aatcctgtat atttacactc ttatccagct
     8041 tgtcaataaa ttcttttaaa tctgcattaa agtgcgaact ttcaagtata ttttgccatt
     8101 cttttttatc ccaaaaatat atctttgctt cttcactctt accatagctt aatactgtta
     8161 aattagctgt ttcaggtatg tttgaaacgc ctaaaaaatc ttcttttaaa agagcattta
     8221 aaaggcttga ttttcctgca ttcatcacgc cagtgatggc tatattaaac tctaaatttt
     8281 gaaatttttc caaagttttt tgaagtcttg attttaaatt ttcatcaaaa cttagctttt
     8341 gaagctctaa attaatggtg tttaattctt taaaatcatt ttgaaataaa gctttttgat
     8401 ctatactttg aactttttct tgtgaaataa aatcaaatat ttcagtattt tttgaaattt
     8461 tttctaaaat ttttagagcc ttaagtaaat cttgctttgg aataaaacct gatttaaaaa
     8521 gatttaaaat acaaatttga gcattttgta tactaaaaat atccactctt aaatcaattt
     8581 ttttgcaaag ctcttgaaat tcttttaaga gaaaatatct ttcataattg tctttattga
     8641 cacttaaaat aatcgcacac tcggctgtat caagtttgtt tttatcttga aatttagcat
     8701 caaaatttaa aaattggagt tcattttgcc aaattttttg gaataattct ttcataatct
     8761 tccccttaaa aaggggaaag atttatttat ttctttgagc gacaagttgt cttctcatat
     8821 aagcgatttt actttgtaaa ggtaattctt tagggcaatt atcttcacaa gcaagcaacg
     8881 acatacaacc aaaaacacca tcatcatcgc ctactaattc ataaaaatct tccacacttc
     8941 tatggtcatg cggatcttgt aaatatctag ctgttcttaa aagccctgta gcagctatga
     9001 aatttgggcg cataagttta gttgcacaag aagctacaca aattccacac tctatacaac
     9061 gatcaagttc aaaagtttca tccgcaactt ctggctcaat gcgttcttca agtttagaaa
     9121 tatcagtttc tttttcatta tgcacccagc tttcaacacg cttacacatg tcttcaaacc
     9181 actcgcctgt attcacgctt aaatctttaa tatgcctaaa tgcaggcata ggcataagct
     9241 ctatcactcc atcaggataa tctttagtca aagttttaca agcaagtttt ggcactccat
     9301 taatcatcat tgcacaagat ccgcaaatcc ctgcacgaca aacaaagtca aaactcagat
     9361 ctgcatccat tttttcacgg atcaaagtca aacatacaaa aaccgtcata aaaggagttt
     9421 cttcaagctc ataagtcaca aaatgtggtt tagaaatttt gcttaaagga ttgtatttaa
     9481 atgcctttat tgtcaatttt ctactcataa tcaactccta ttctttggtt tggtgcttta
     9541 tatttagctt gcaattcata aggcattaaa gcgttttgaa tttcataacg acctttgcct
     9601 tcagcttcca ttttttcacg gatagcatcc acttcagctt ggcgtttttc acttaaagga
     9661 ttttctataa tatttccttt agctccatat ccacggaatg ctggtggaat ttccattttc
     9721 ataatatcaa gctcttcgta ttctatgcgt ggtaaggttt cgccttctac ccaaaaagta
     9781 ttggttcttt tcatccaatt taaatcatct ctttttggat aatcttccct ataatgcgcc
     9841 ccgcgacttt ctgttcttaa aagcgctcca taagctacgc aaagtgctat ttttaacatt
     9901 cttggcactc tatacgcttc ttcaagctct ggatttgcac aatcaagttc tttacaatgt
     9961 actttaacgt cttgagaatc tttataaagt ttttcaagtt catctactgc ttctttcaaa
    10021 ccttcacctg ttctaaagat ggccacctta tcccacatga tttctttcat tctgtttttg
    10081 atttcaaaaa cattatgttt accttcttta tctactaaag attttaaata ttgatactct
    10141 ttagttaaga agtcttttac tacatttgta tcaattactt caccattatt tttacaataa
    10201 tctgcaaaat aatctcccac tatcatacct gctacaacag tttcagcaca tgaatttcca
    10261 cctaaacgat taaatccgtg catatcccag caagctgctt ccccacaagc aaaaagtccg
    10321 tttaaccatt gactttcacc cgttggttta gttctaattc cacccataga ataatgctgc
    10381 attggaagaa ctggtgccca accttttgga ccctcgtctg ctggatcaat accattaaaa
    10441 gttttacaaa tatcttgcac atcacgaaga tttttttcca catgagcacg acccaatata
    10501 gaaatatcaa gccataaatg atccccataa gggcttttta cacctttgcc tttacgaata
    10561 tgttccatca ttctacgact taccacatca cggcttgcaa gttctttttt ctctggttca
    10621 taatcaggca taaaacgata tccatccacg tcacgtaaaa ttccgccatc accacgacaa
    10681 ccctcagtaa gcaaaatacc gcttggtaca ataggagttg gatgaaattg cactgcttcc
    10741 atatttgaaa gtctgcaaag ccctgtttca agagcgatgg ctgcacccgt tccttcgcaa
    10801 attaccgcat ttgtagtttg tttataaatt ctaccatagc cccctgttgc tatcatggtt
    10861 cctcttgcaa tataagcaat gagttgtcca ttagttaaat ctctagcaat tacacctaag
    10921 cattttttac catcatggat gattcttacc gcttccattc tatcgatgat ctttacttgg
    10981 tgcttaatgg cttcatttgc tacaccataa agcatacaat gccctgttgc atctgcgata
    11041 tagcaagttc tccatttttt agttccacca aaatctctag cattaataag cccgtgcgct
    11101 tcttcttttt cttcaatcac agttttttgt gcattgatta caacagttct tggaccttta
    11161 gtaactctag tccaaggcac accccaagcc gcaagttcac gcactgcttt tggtgcagtt
    11221 tgagcaaaca ttcttgctac ttcttgatca cagccccaat cacttccttt tactgtatct
    11281 gcgaagtgaa gatcttcatt atcaccctca ccttttgccc catttgctaa acttgcctgc
    11341 atacctcctt gcaccgctgc agagtgagaa cgcttcactg gacaaatact taaaagtgtt
    11401 acactttggc cactctttgc tacttcaata gccgctctaa gacctgctaa tcctccgcct
    11461 attactaaag catcactata ttgtatattc ataatttgct ccattgtagt tttttatcat
    11521 cgcagtagtt tgggtttgat tttggtagtt ttcataacct atttttataa atgctgcaag
    11581 acttaacaca cctaaaacta ggaagaaaat actgattatc catttagcag ttttaagctt
    11641 tttgcgactt tcttttacat tttttccttc aaaccaaccc catttaacac aaagtctata
    11701 aagccctata cttccatgaa gttcaacaca gactaaaaga acagcataaa aaagccacat
    11761 aaaatgactt acaaccctat ctcctgacat atcgccgctg attttatctg cattggttac
    11821 aataaaaata agatgagcag aacctaagaa aaacataata aaacctgtaa aagcttgaac
    11881 ccaccataac gaagtatcgc tgtgattcat ttttttactg tgtgttctta gtatttgata
    11941 ctgacggtaa ttaataggaa attttctcat tgcaagtaaa gcatgaacga aaaaaaccac
    12001 taaaacacag gcggctaaaa atgaagtaag ataactcata acaggattat cgtaaacaaa
    12061 ttttaattct aaaaaatgca ctacagaatt aaaaaaatcc tcactgacta aaattgtaga
    12121 aacaaaaagc atatgcaccc acataaaaag acctaaaaaa agccctgagg cactttggat
    12181 aaagtctaat ttcgcaggca ttttactttt tttgccctca atgctcttac ccaaataacc
    12241 ttcgataagc tcacgcatct ttactccttt gtaaaaagaa attaaaaaaa tccatttcat
    12301 tatattacaa aagtctttaa gatagattaa atatttactt ttttaaactt tatacaaata
    12361 taaactaaca aagctgttat aaacattata aaacttaaaa tttgccccat actcataccc
    12421 cataaaacaa aacctatacc aaaatcaggc tcgcgataaa attcacatat aaatcttgct
    12481 aatgaataag caccagcata aacaagaatc aattcccctt gaaaactttg cttaaatctt
    12541 gctaaataaa ctataataaa aacaacaata ccttctaaaa atgcttcata aagttgcgat
    12601 ggatggcgca atactccatc aacataaatt ccccaaggca catttgtaat gcgaccaaaa
    12661 agctcttgat ttaaaaaatt tcctatacga ccaaaaacat aagccaatgg aacacttaaa
    12721 gcaaccaaat caagaaaaat ccaaggattt gttttatatt ttttacaaaa caataaagta
    12781 gctatcaaaa atcctataat tgctccatga taactcatac ctcgaatacc tacaaattca
    12841 ccattaatat aaggattaaa aatttgccaa ggatgagtaa tataatacat agtatttgca
    12901 tcataaatca aaatatatcc aagccttgca cctaaaataa cccctatttc aacccatata
    12961 aaataactat ccaaatgttt ttcattaatg tctagttgaa attttcttac aaaaaattta
    13021 gccaaaagca aagccaaaag caaagctata acatacataa tgccatacca atgcaccttt
    13081 aaaccaaaga tgctaaaagc tataacatta aaatttgaat aaatatgctg ccaaaattcc
    13141 atatatcttt cctaattttc ttttataaaa atataacaaa aaaactttaa cttgctataa
    13201 ttaacacaaa cacattaaat aaaggtaaaa aatgaaaaaa tatattttac ttgctagtag
    13261 tatgttaatt ttagcagctt gtgggggtac aagcagtaat tttgtcaatg tttctatgcc
    13321 aaattttaaa ccccaagttc caacaaaggt tgaacctatt gattctggag taagcattgc
    13381 tcttgagcct attaatatag aacaaaataa caattattct gattattttg aaaattcagt
    13441 gcttaaaatt cgcatagaaa aagaaattga tcttttaaaa cgaaatttag aagagcagat
    13501 caaaaccatc gctcaactaa aaggctataa aatagttact actaatccag actatactct
    13561 taaaagttca atcagtattt atacggaaga aaaaaatgca caaaaaacaa gcaattttat
    13621 gagtggagat tatgtaaaat ccaatttagg tataaatttt aaaggtaaaa tagattttat
    13681 agatgcacac aatccacaaa attcaaccaa tctttcaagc agcaccaaac tagattcttt
    13741 agttgcgctt aactatccta ttaaaaatga tgatggggtt aatatgttta aaactactat
    13801 ctccaccgta ccaactcaac ttaataaagg tttagagcaa cctgcttttg aaattgataa
    13861 aagtttttta gctttttata aaaatacatt aaatacactt tataacaatc ttccaaaagc
    13921 aacagacata ggcaaaacta tacctaatac aaacagtggt tttaatagtt ttgatggcga
    13981 tgctactttt gaagaaagtc tacctcaaac aaactctaat caaaataata caattgaaaa
    14041 cacacctaca caaaatattc ctacaaatcc atcttcaaca aatcaaaata atcaaagtaa
    14101 aaatcaagat ggggtagaaa tatttgaatg ataaaacttg tgagaaaatt aaactttctc
    14161 acacaaaaaa taagattttc ttatacaaaa aaataactat cattctactt taaaatcaat
    14221 gcctgttgca ttgcattttt tatcatctct cttttatctc gtatttcaaa aaaaagctca
    14281 aaagcaaaaa ccccttgcca taaaagcata tcaagtccat ctttaatttt taaatgatac
    14341 tctttacaca atctataaaa aggtgtttct ctgccataaa ttacctcaaa agcaaattta
    14401 gctttaggta aaattctatc taaaagctct ctatcacaag gtaaattttc atcttttaat
    14461 ccagcagaag ttgaatttat aaccaaatca aagtcaaaat cttgcaagtt tttataaaga
    14521 taagttggat aagctaaaaa atctttaaat ctttctttac tacgattagc tatatacact
    14581 tctacgcctt tttgttttaa tgcataagca agcgccaaag ctgtacctcc agcacccaaa
    14641 atcaaagctt tttttatatt atcaaaatcc ttaatagcct ctaaaaaacc taaagcatca
    14701 gtattataag cgtaaatttt atcttctttt aagcataaag tatttgcaga gccaatattt
    14761 ctagcaaaat catccttcac atcagcaata tctaaagctt tttccttaaa aggcaaagta
    14821 atattagctc cactaagtcc taatttaaaa aaatcttctc ttaaacagtt agcatttctt
    14881 aaatgatagc gtgtataaat gctatcaagc cctaaggcat taatagcatt attatgcatt
    14941 ctaggcgatt tagagtgaga aataggatcg cctataactg ctaaaaattt cattttaaag
    15001 tgaaagaaaa agcatctttt gcaatatcct tacggatttt agcaagttct gctgcaatat
    15061 ctgccttttc aaatggtcct attaaaacct tggtaatttc tttacctcca actgtagttt
    15121 tataaagttt ataatcataa cctttctgtt ttacagaagc aagttctttt gatttttgat
    15181 ctaaattact tactgagaaa atttgcacat aaatgcccga tgctaaacca cttggatgca
    15241 caggtttagc atcaacattt ttaaataaat catttgcatt ttgttctttt ttagggattt
    15301 gttttgtact ttctttttct ttttttacag ctgtttgttt ttttgcttct tctttaggtt
    15361 ttgcagtttg tgttacttct tgtttaggag tacttgcttg tggagtggta ttttctgaag
    15421 tagttgctgt gggttctgct ggaacttctt gatcaggcat agcaaaattt gtagtatcat
    15481 tgttatttga actagaggtt gttgtatttt gagttgtatt ttgttcatct tgaaattgtt
    15541 ttcttaatgc ctcaaattga tcttctgctg aagtattatc tgtaattggc atactttcaa
    15601 aagaagtatc attgttattg tcttgagttg ctataggttc acttggcaat acactttgat
    15661 tttgcgtatt ttcatcacca ctaccattaa taagcttcat aactatcatg atagctaaaa
    15721 acaaaataac taaagcaata actcgtaaaa gaattttttt tactttttca cttttattac
    15781 ttttttctaa aataatatca tcaaattcat ttttttgatt ttccataatt tgtcctttct
    15841 tacatatgct tagaccaaga acttcctcgt tctttttgat aaacctcata aggcaatatt
    15901 aaaatattaa attccctagg tacatccata ctaggaaaca ccttccattc tactggcatt
    15961 ttacttgcaa acatcattga aagtttagac gctaaagaat aaccttcgtt taacgccgtg
    16021 tgtcctttgt gaatataaag atgtaaatgt cctggagttt tagtcttata ggctgtgaaa
    16081 tttataaaac cttcttctct taaaataagt tgtgcacggt gataaaatct ttcagcatta
    16141 aaaccattat aatcaaagac aatattttct actttattat cttttgttat taaatcatga
    16201 gcgacaacaa tttttttagc agcgtgttct ctcatgacat ttaaatttaa aggagcatca
    16261 actctttcaa atttatcaaa aaataagcga cctctatgtg taattttatt tacaatttta
    16321 tcgcgtctta tataataatg atcgccaatt attttaatta gcgacatatc cattggtgaa
    16381 atcaaaacat agccctttca taaataataa aattacttgc aagttttttt aattcttgtt
    16441 taatattctc ttgtaatttt tcattattaa tatcatctaa aatatctgca atataatttg
    16501 acacaatttc catttctttt tctttaaaac ctctggcagt aagcgctgga gttccaagtc
    16561 ttaatccact tgtgataaaa ggacttctaa tctctcctgg aacggtattt ttatttgcag
    16621 taatacctgc atttccaaga gctaaatctg catcttttcc actaaattca cgatctaaaa
    16681 aactcattaa aacaaggtga ttatccgttc cattgctaac aagtttaaat tttctatcca
    16741 ttaaaacatt agctaaaact tgagcattgg ttcttacttg ttttgcataa actttccact
    16801 catcgctaag attaaattta aatcctactg cttttgcagc aattacatgc atcaaaggac
    16861 caccttgaat acctggaaaa atggcagaat taattttttt agcaagctct tcatcatttg
    16921 tcataataat accacctctt ggaccacgca aagttttatg tgtggttgag cttactacat
    16981 gagcgtgcgg aaaaggactt ggatgctcgc ctgccacaac aagacctgca atatgtgcta
    17041 tatcagcaaa aagataggca cctatttcat cagcaatttc tctaaattta gcaaaatcaa
    17101 tcactcttgc ataagcacta gctccacaaa ctattaattt tggcttttct ttcttagcga
    17161 tttctcttac tttttcataa tcaattcttc catcaagttc tacgccgtaa aaacaacttt
    17221 cgtacatttt acccgaagaa cttacttttg caccatgagt taaatgtcca ccatgactta
    17281 aatccattcc taaaatttta tcacctggat taatcaaagc cgcataaaca ccttgattag
    17341 cttgagaacc tgaattaggc tgaacattag caaatttaca attaaaaagt tttttacatc
    17401 tttcaatagc tagagtttca atctcatcaa caaattcaca accaccataa tatcttttac
    17461 ctggataacc ttctgcgtat ttgttcgtca agatacttcc tataacttcc attacttcag
    17521 gtaaagtgaa attttcactc gctatcattt caagaccttc gcattgacgc tctaactctt
    17581 tgtttgttaa atcaaaaatt tctttatcaa acatttctaa actcattctt tctcctttag
    17641 ttctgatttt aatggacgca ttgcaggaaa caatatcaca tctcgaatag attttttatt
    17701 tgtcaaaagc ataacaagtc tatctatacc tataccctgc cctgccgttg gaggcattcc
    17761 ataacccaaa gcatttacaa aatcttcatc catttcgcaa gcctcttcat cgcctgcatt
    17821 tttagcttca atttgtttta aaaatctctc atattgatca agaggatcat taagctcatt
    17881 aaaaccattt gccaattctc ttccacaaat aaacaactca aatctctcag caatctgaga
    17941 atcctcatcg ctacgtcttg ataaaggact tatggaaata ggaaaatcaa tcacaaaagt
    18001 aggattgatc aatttttctt ccacataatt atcaaaaagt tcagcttgta aatgtccaag
    18061 ttcaagcttt tcattcgctt caaaaccatc tacttttaat ttagtaagaa ttttttcctt
    18121 atcttcaatt aaatccctat ccaaaccacc atatttacaa agtgcatctt tgtaagtaat
    18181 tctttcaaaa ggtttagaaa aatctatcat ttttccatca aattctattg tttttcccaa
    18241 attaagttta tctaaaagta aagcaaaaag ttcttcagtt aaatccatta aatctttata
    18301 attatgataa gcccaataaa attctatagt tgtaaattca ggattatggg ttaaatccat
    18361 accttcgttt ctaaaacaac gattgatttc aaaaactgcc tcaaaaccac ccactacaag
    18421 tcttttaaga taaagttctg gagcaattct taaaaatctt tctacgccta aagaattgtg
    18481 aaaagttaca aaaggcttag cgtttgctcc acctgcaatc ggatgcatca taggagtttc
    18541 tacttctaaa aagcctttat tttcaaaaaa atgacgaatc aaactcacca ctttagaacg
    18601 cactaaaaaa tcttttctaa cttctgcatt cattatcata tcaacataac gtttacgata
    18661 tctttgctca atatctgtta atccatgata tttttcaggt aaaggaacaa tagcttttgt
    18721 agcgagtttt acttcacttg catgcaaact aaactcacct gttttagtta caaaaggaaa
    18781 acctttaacc aaaacaatat cacctacttc taaattcttt ttcaaaatcg cataaagttc
    18841 ttcacctaca ctatctttat taaaataaat ttgcaaattt gtatcttcat cttcaatgtt
    18901 tgcaaaaatc gatttcccag ctatacgcaa aagtttcaaa cgtcctgcaa caacagcatt
    18961 gacactttca tctctttttt caacttgctc taaaatataa gaaaatttat ccttaaaagt
    19021 ctttaaagac atttcttttt ctaaaaaatg aggataagga ttgatcccta aattttttaa
    19081 ttccttggct ttttctattc tttgctgctc taaaatatta tcaaacattt atatttttac
    19141 ctttgctttt tgattgttac aatcaccaca aacaccataa agctgcatca aatgccctgt
    19201 aagtttaaaa ccatgttctt ttgcaatcaa ggcttgctgt ctttctataa taggattttc
    19261 aaactctata atttttccgc aatttttaca tatcatatga tcatggtgag gtttattggc
    19321 aagctcgtat tttttacctg ctgaaccaaa agaaatggaa gttaccattt ctgcttcttc
    19381 aagcaaattt aaagtacgat aaacagttgc aattcctaca tttaaatcgg gttcagcttg
    19441 tttgatttcc atatataaac tttcgggtgt gtaatgagta tcactgtgat aaagagtttt
    19501 taaaagtact tctctttgct tggtatattt aagtccgcct tgtcttaata tttttttaaa
    19561 tctctcaagt aaaacatcat attccacatt ttctatcagc atatcactcc cctttttgag
    19621 tattgtttaa atcacttaca atatcttgca acttttcact agcatgatct agactatttt
    19681 ctgttaaagg ttgattcata ataaaagatc cagtttcttt aagcaaattc aaagtatagc
    19741 tatttttagc aaaattatct aatttatcat ttaaaaaatc gattcttgct acacaaaaaa
    19801 ctaaaattgc aaaaattaaa aagatttttg ccccaccaaa tataaagcca ccaatacgat
    19861 ctaaaaaacc taggccactt aatttgatca acttagaaag aaaattacct gccaacaaac
    19921 aaactatcca aaaaataatt aatatggcca aaaatccagc aaatccagct aagctttgat
    19981 tttctatctt ataaaaagta ctttgtataa attcagccgc ttgagttgcg tattttgaag
    20041 caataaaaac accaccaata atacccaaaa gtccaaaaat ttcttttatc aaaccattga
    20101 taataccctt aagccctaaa agcaaggtaa atcctaaaat aaaagcatca aaccaataaa
    20161 aattcatttc aatcactctc tgattttttt tgttttaaat ttattctaca aataagcact
    20221 aaatgctaag ttaatcattc tatgatttta ggaacaacaa aaaaatgttc ttgttttttt
    20281 ggagcacaat ctaaaacctc atcaataaca ttgctatttc ttatctcatc aatcctcaaa
    20341 ggagctccac cttttatagt gcttacagta atctcttggg aatctagatc aagttcgttt
    20401 aatttttcaa caaaattcac aatttcactt aactgtacaa tggtttcatt tctgtttttt
    20461 gttatttgta aagcacttaa tttttcaagc ttgcttaata atttctcatc tatttgcatt
    20521 tcttaaacct taataaaaaa gttaaaattt tgaaaattat atcataaaaa gctttaaatt
    20581 gtttaggata ttttgcaatt tatatgatac aataccataa tttttctata caaaaataaa
    20641 aatatttttt caaggataaa ttttgggact aaaagataat ttaaaagctg ttaaaaatga
    20701 acttaacaca gaagaacaat ttatagaaaa ttttatcaaa ggagagagat ttatacgcaa
    20761 gtataaattt tatatatctg ctgttgtgat aattttagtt gcttggtttg ctggaaattt
    20821 tataatctca aaaataaacg attataaaac aaaagaagca aatgaaattt atgccaatct
    20881 aatacaagat cctagcaata aaaatctttt agaacaactt aaaaataaaa ataccaatct
    20941 ttacgctatc tttttactaa aagaaaatat taatgatttt aataatacag ctctccaaaa
    21001 tgaactaaaa caaatttata ataatgctca aacaaacact ttacttaaaa atattattgc
    21061 attatcttta ggggataaat cgatattttt aaaaaattat gataaattat tagaagctta
    21121 caaactttta gagcaaaata aaatcgaaga agctaatgtt ttactttctc agataaaaga
    21181 aaattcaagt ttaaatcaaa tagctaaaaa cctcaaacat tatcaaggca ttacacaatg
    21241 aaaaaaatat ttttaacact attttgttta atatttctat gtgcttgtgg cactaaaaga
    21301 caatattttg aaccagaaca aaccaatgga gatttaagcc acaatggtaa tttaaaaagc
    21361 aaaatcgttg actggaatct agtttctgca aaacttagca ataatactgc tatattaaaa
    21421 aataatattt ctatagataa gtttaaactt cctaaaaatt atatacttat agcttatcaa
    21481 gatggagaat attttaccgc agatgacaat gggaatttaa aaatttttga caattcttat
    21541 aatgaaattt ataattttca atttgacgct agtgttgtag gagtagcttc taatggagat
    21601 gatttagccc ttgtacttgc aaataatact atagttcttg caaatcgttc tttgggtatt
    21661 aaattcagtc aaaccctaac ctcagctcca gctcaagaca gtcgtaccgc taatcctata
    21721 tttttagaca atatcatcgt atatccaacg ctagatggca aaattttaat tctttcaaga
    21781 aacaatcttc aagtcattaa agatgtggtt atttcagcag aaaatttttt caacaatgta
    21841 atccatctaa gtgtaattgg agataaactt atagcagcaa cagctaaaaa aatcattgtt
    21901 gtaagccctg ctagaactct ttatcttgac gctgacataa aagatgttgc acttagcgat
    21961 gatggtattt ttatactaga aaaagatggc actattatta aaactgatta taacttaaga
    22021 aaaattgcag aaaaaaaatt tgaatttgct atttttgtaa aaagcaatat atacaataat
    22081 tatttatata tttttgaaaa aacaggctat cttatcaaaa tgaatctaaa tttagataat
    22141 acacaagtat ttaaactttc agaagctgtt gataaaattt ctttcatggg gaatggtaaa
    22201 ttttactacg gagataaaat tttagatttg ctatgataaa aattttagaa caaacaataa
    22261 aggctttaaa attaaattta aagccctatg acttaagtat gttgactaga aaaaaaagtt
    22321 atatttgcgc caaagatcaa aataacattc tttttatgta tacaggaaaa acaaaatttt
    22381 taatgaaaga tgccttattt ttagaaaatc tagcacagca aattaacata aataacaaat
    22441 atttttttag catggcttct ctttgctcta aagcaaaaaa tcatctagaa atgaaaggat
    22501 ttaatatcta tgttgctctg tgatattggg aattcaaatg ctaatttcct agatgataac
    22561 aaatatttta ctcttagtat agatcagttt ttagaattta aaaatgaaca aaaaattttt
    22621 tatatcaatg tcaatgaaca tctcaaagaa catttaaaaa atcaaaaaaa ttttatcaat
    22681 cttgaacctt attttttatt tgatacaatt tatcaaggat taggaatcga tcgcatagca
    22741 gcttgttata ctattgaaga tggagttgtt gtagatgcag gtagtgctat tacaattgat
    22801 attatttcta attctataca tcttggtggt tttatcttgc caggtattgc aaattataaa
    22861 aaaatttata gccatatttc accacgatta aaaagtgaat ttaacactca agttagtctt
    22921 gatgcattcc cacaaaaaac catggatgct ttaagttatg gtgtttttaa aggaatttac
    22981 ctactgataa aagatgccgc tcaaaataaa aagctttatt tcactggtgg agatgggcaa
    23041 tttttagcaa attatttcga tcacgcaatt tatgataaac ttttaatctt tcgaggaatg
    23101 aaaaagatta taaaagaaaa tcctaattta ctttattaaa aatgttacaa aaattctcat
    23161 tgatatcaaa ccttaatgaa atttaacttt ttgtaaaaca aattcaatta aacttctatt
    23221 tagaaaaaag tttattaaaa taaaaaaagg aaaaacaatg agccaacaag aatttgatgt
    23281 gcttgtcatc ggagctggaa tttcaggagc agcattattt tacgagcttg caagatatac
    23341 aaatattaaa aatattgctt tgatagaaaa atataataca gctgcaacat taaattctaa
    23401 gggaacgagt aattctcaaa ccattcattg tggagatatt gaaaccaatt atactttaga
    23461 aaaagcgcga aaagtaaaaa gaacagctga tatgatagtt aaatatggac tcatgcaaaa
    23521 tgcgcaaaat aatttcatgt tttctcatca aaaaatagct ctagctgttg gagatataga
    23581 atgtgattat atgaaaaaac gctatgaaga atttaaagaa ctttatcctt atataaaatt
    23641 tttcgataaa gcaaaaatca aacaaattga acccaaggtt gttttaggag aagattgcaa
    23701 tcaagataga cctgaaaata tctgcgccat gggtgttgaa agcggcgagg tttttacaac
    23761 tgtagatttt gggaaaatga gtataaatct aatagaacaa gcccaaaaac aaaataaaaa
    23821 tacttttgtt gcctttaatc aagaaattgt tcacatagaa aaaaaggatg atatttttat
    23881 attaaaaacc tcaaatcatc aagaatacca tgccaaaagt gtagttgtta atgctggggc
    23941 gcactcttta tatttggcgc ataaaatgaa tttaggtatg gataagtctt gttggcctgt
    24001 tgcaggaagt ttttatttaa ccaaacaaaa acttttaaat ggcaaagttt atatggtgca
    24061 aaatcctaaa cttccatttg cagctcttca tggagatcct gatttgcttg ctgatatgaa
    24121 cactcgcttt ggacctactg cacttgttat tccaaaacta gaacgttatc atggactaaa
    24181 atcagttcca gaatttttcg aagcactaaa acttgataaa actgttttaa aagtaacttt
    24241 taatatgttt aaagatgcaa caattagaaa ttacatcttt tataattatc tttttgaact
    24301 accttttatt gataaaagct tatttgttaa agatgctaaa aaaatagttc caagtcttaa
    24361 aacaagtgat atttattatg caaagggttt tggaggcgta agaccacaag ttattgataa
    24421 gactaaaggg gaattaatgc taggtgaagc aagcatcaca gagacccctg gcattatttt
    24481 caatatgact ccaagtcctg gggcaacaag ttgtctagga aatgctgaaa gagatgcaaa
    24541 gcttatatgt aattacctag gaatggaatt taacgaagat aaattttctt cagaattatt
    24601 gtaatcattt tgtttctatt tttagctaca ataatttcaa aaggagttta ccatgcttaa
    24661 aaaaacaaaa attgtagcca cagtaggtcc agcaagtgaa aaggaagaaa ttctacgcca
    24721 aatgattatc aatggtgtaa atgttttccg tttaaacttt tctcatggaa cacatgagta
    24781 tcataaaaaa aacttagata ccataagaag agtagctaaa gaattgcata ctcgtattgg
    24841 aattttacaa gacattagtg gtcctaaaat tcgtacaggt gaacttaaag aaccatttga
    24901 attaaaaaag ggtgatagac ttgattttta tcgtgaaaca attttagggg agaagattgc
    24961 tcaaaatcat tataaaatca gcatcaatca aaaatccatt ttagatatgt taaaaattga
    25021 tgaatatatt tatctatatg atggatcaat tcgtgctaaa gtagtaagca tagataatca
    25081 aaaaattgaa accattatag aaaatgatgg ttttttaaac tcaaataaag gtattaattt
    25141 tccgaatact aaaatcaata ttgatgttat tacacaaaaa gataaaaatg atttactttg
    25201 gggtataaaa aatgaagtag attttttagc aatatctttc gtacaaaatg cacacgatat
    25261 tgatgaagtt cgtgaaattt tagcacaaaa taacgcaaaa atatctattt ttgcaaaaat
    25321 tgaaaaattt gatgcagtag aaaatattga tgagattatt aaatctagcg atggcataat
    25381 ggttgcaaga ggagacttag gtattgaggt accttattat aaagttccta atatccaaaa
    25441 agaaattata caaaaagcaa acaatgcctc taagcctgtt attactgcga ctcagatgct
    25501 tttttcatta gccaaaagca aaaccgccac aagagctgaa atttcagatg ttgcaaatgc
    25561 tgttttagat ggaacagatg cagtaatgct aagtgaagaa agcgccgttg gtatagatcc
    25621 tgcaaacgct gttgatataa tgtgccaaac tataatagaa acagaaaaac gctatccata
    25681 taacaaattt aatgatttta atgatttaga caatacagat aaaatcatgc gttcttcagc
    25741 tcatcttgca acagatctta acgctgatgc tattttttct ttaacaagta gtggaaaatc
    25801 tgctattaag attgcgagat atcgtccaaa tatagaaatc atagcagtag ggcattctga
    25861 aaaaacctta aactctttaa gtatagtttg gggagttaat cctgcgatct tggttaacaa
    25921 aagtaatgaa cttacagaat tattaaaaga ctctgtaaga tcaagtgttg aaaaaggttt
    25981 tatggatgaa gacaaatgct atcttctaac tgcaggcttt ccaacaggag tagaaggtac
    26041 tagcaatctt atccgcattc tcaataaaga gcaaattgct tattatctac aataaaacat
    26101 taaattcctt tgaaaataag gaatttaatg tccttataaa ttttttaagt caaaagtcga
    26161 tataaattaa agcctcacac aaaggagcaa atatgcaagt gaatactttt tcaaatatcg
    26221 ctagcatggc acaaacacaa gttagcaata agaaggcaga tgatgctaag gaaaacacaa
    26281 aagacaaaaa tgttcaaagt gctaattcta gcaaggatgt agataaaaat acccttgaaa
    26341 aattaaatgc acttggtgga aagggcatta cacaaattta cctagttcag tttcaacagc
    26401 aaacaatgaa tgctgtaata ggttcgagca atgcccaaac tggactagat agtcttttaa
    26461 atggtgccaa tttagatact gcgaaatcta tacttacaaa tattgatttt gcatccttag
    26521 gctacagtgg caaaaatcca cttgatatga atacagatga acttcaacaa cttgtaagtg
    26581 aagatggttt ttttggagtg gaaaatacag ccaatcgcat cgcggatttt gttattaaag
    26641 gcggtggcga cgatgttgaa aaattgaaaa aaggtcttga aggtatgaaa aaaggatttg
    26701 agcaagcaga aaaaatgtgg ggtggagaac ttcctcaaat cagtcaagat acaatagatg
    26761 cggcacttaa aaaagttagc gatcgcattg atgaactagg cggaaaaact ctagatcttc
    26821 aagcttaact aaaaatgctt agaaatttct aagcattttt agttgttatt aatatcaaaa
    26881 gtaaaaaatt cactcttaaa attattaggt aaagttttat actgagatat cgcagcttca
    26941 tagttcttta cttcttgata caacatacca agagctgctt tactttcttt gttattttta
    27001 tctgtaagtt tagaaagctg caaaagcgct atagctgaat ttggattatt tgcacctacg
    27061 gctgctacgg ctgctaaaaa taaagtttta gtatctttag ctccataatc atcaatcaaa
    27121 gaattgtaaa gcgcataagc ctcctcgtat tgctgtgcaa aaatatccaa ataagctaaa
    27181 gtttgcaaaa taccctcatc ttttgctcct gaaacattaa tcaactcttt aaatttctgt
    27241 ctttctaaat ttaaaagccc tgcaatatgc attaaattaa cataaaattc cctagcgata
    27301 cttggcccac caaaaacact acgataatca agttttaaat ttttaaaatg aatttgagca
    27361 ttttgagcat attctttaat atttaaattt gaatttaaag aattaaaata caaaatattt
    27421 gccaaaatat cttcaggcaa ctctgaacgc aatttagcaa ttttcacatc tacttgatta
    27481 ttaaggttat tatttttagc aacaatagct tcaaaaatca aactcaaagg cgtgtctttt
    27541 tttgtttcat ctaaataagg aagcatagaa atataattat tattaactaa aaataacata
    27601 cttttttgca tattagcttt aaaattagaa tcagcagcta tattatcaag aatttcattg
    27661 taaagtttag ttgtatcaat atcaattaat tttgcacaaa acatagcaaa agcacctgct
    27721 aagtaatttt taggattaag atgatatgaa cttgaaaaat gcttataagc aagttcataa
    27781 ttttgcattt gggcataagt taaagccaaa ttataatgta aaatactatg ttctggataa
    27841 tccttgataa gtttttgaaa ttcttggtta gcaaggcgta acttctgatt taatgcatag
    27901 ttaataatat tggcaatttt tacattggta gatgaaagag ccttgcttgt attaagataa
    27961 actcccgcat cagcactatc atcaacgaaa tctgtaacat tagctttttt aatatataaa
    28021 gcagcctgct tactatcaaa aacttgataa ggcgcaaaat aaaaaagcaa atcgaattga
    28081 tctttttgtt tttttaacaa atcttttgaa aaagaatttt gagcaactgc tatattaaaa
    28141 agatccttat ttaaacgaac ttgaatttta taagcatcta aaatcttata tctatcttta
    28201 tcattatcat aagaattttg caagcgcgct aacatatctt gataatttcc tgttttaata
    28261 tcaaccaatg ttaaagccgc caaactttga ttaaaatctc tttcaatttt catcgctgta
    28321 cttaaagcga ctttagcttt agcatattct cctattctag cgtataaaag acctaaagat
    28381 aaactagatt caaaattgcc ttgagaattt aattgctgta tagccttgga atcaaagtcc
    28441 atttttgcat aaattttagc agacaaatac tttgcaacat cagaatacgg ctccacatct
    28501 gttctttgta acatttgtaa agcctcaggg taatatcctt tgtaataatt aatcaagctt
    28561 aaataataat catataattt tgattttcct tcttttggaa gatacacttg agctaaatca
    28621 atataatatc taaatttttc cttatcatta agctttaaag cacaaacagc agcattgata
    28681 gcagctacac tttgattttc tccattggct atagctttct tgaagctttc aaaagcttct
    28741 tggaatttat tctcattcat ttgagaaacg cctaaattat aattagataa agattcgtta
    28801 tatacggcaa cttgctcata aacttttaaa gcctgttcaa cctcaccctt taaatataaa
    28861 gcatttgctt tttggatcat accatcaatt ctttgcatat cattgtattt atatgattca
    28921 tcaggcataa caacaggttg ttctaaaggc ttagaagcta taatatctgg tttaattttt
    28981 ccttcactaa aagttaaata aaaaagtgta aaaactaaaa tacaaataat ccccaaagat
    29041 aaacccacaa gagacataaa cttacgatct ttataccaag gcgtaggctc ttgactttca
    29101 acttcttcaa aagttgatac atcttcaggc gcactttctc ttgtaaattt aaaaccacta
    29161 tcactatttt cttgaggtaa ctcttctggc aatgatgcaa attcttcatc ttctggagct
    29221 tacccctctt gccctttaaa tccctctaaa ctctcatcaa gtcttggttg atttaagcca
    29281 tcttcgggtt tttctagtat tatatcttct tgttcagcca tctatactct ttaaaaatat
    29341 tttttcaaag catcaggaat atgaattttt ccttctttat cttgataatt ttccataatc
    29401 gctaccaagg ttcttcctac tgccaaagat gagccattaa gagtgtgaac gagttcattt
    29461 tttccttgtt catttttata gcgaatttta gcacgtcttg cttgaaaatc acgacaattt
    29521 gaaaccgagc taatctcacg atatttattt tgtcctggaa gccacacttc aagatccaca
    29581 gtttttgctg cactaaaacc caaatctcca gtgcaaagca tcaaatgtct atgtgctaaa
    29641 cctaaagaac tcagcaaatc acttgcacac tcaagcattt cattaaacac actatcactt
    29701 tgctcaggtt tagtgatact tacaagctct actttttcaa actggtgttg tctgataata
    29761 cctcttgtat cacgccctgc actacctgct tcttttctaa aacaagcgct ataacaagtc
    29821 atttttatag gtaaagtttc actcgctaaa atttctccac tataaagatt ggttactgga
    29881 atttcagaag ttgagattaa atacaaatcc tcatcatcta ccttatacat atcttcttta
    29941 aattttggca actgacccgt cccaaacata gtagcaccat ttaccaaaaa aggtacatta
    30001 acaaactcaa atccatgact tctattaaaa tctatcatat aatttaccaa agcacggctt
    30061 aataaagctc cttcgttctt aagcacacaa aaacggcttt gtgaaatttt taccccacgc
    30121 acaaaatcaa gccaatttaa actctcgcct aattcaaaat gttcttttgg agtaaaatca
    30181 aagctaggcg gatttaatac ttttttaagc tccacatttt catcttcatc ttcacccaca
    30241 ggcacacatt catcaggaat atttgggatg gcatgagcga tttcttcaag ctcattttct
    30301 aaagcattta ctttaacgct ttgctcatta attttgcttt tattttcgct taattttgct
    30361 tttaaacttt ctttatcttc ggctgtagca agctctttac tgaatttatt ttgaaaagct
    30421 tgaaattctt ctaaagctgt tttttctttt tttaaacttg caaaaagttc agcaagtttt
    30481 tttaagatat tttcatcaac ttttttattt tttaactttt tagccacttc atcaaaatta
    30541 ttttgcaaat tttttaaatc tagcattttc tactccttaa agtccgattt tttcataaat
    30601 tttttgcatt ttttcttggg cgatttttct tgcttttgtc gcaccaaaat ccaaaatttc
    30661 tttcaaatgt gaaggctttt ctaaaagctc attgtatttt tctctcgctt ctttaaaata
    30721 agcatttaca agctcgttta aatacatttt aaaatgtcca taaccctcac cacctttttc
    30781 atagcgtatt tgtaattctt tttgccctga ttcatctaaa aaaagctttg cgattttaaa
    30841 aatattgcag ttttcatgat cttttggatc ttctaaagcg gtgctatctg taactatgga
    30901 agaaatttgt ttttttaagg ttttttcact gctaaaaata tctatagtat tttgataaga
    30961 tttactcatt tttgccccat cggtgcctac aactacagct acttcttcat taactttagc
    31021 ctctggaagg gtaaaaattt caccccattc attattaact tttaaagcaa tatcgcgtgc
    31081 gatttcaaca tgctggattt gatcttttcc tacagggaca atttgtgtat caaaaagcaa
    31141 aatatcagct gccattaaaa caggataaga aaaaagccca tgtgaagcac taagcccctt
    31201 agcaacttta tccttgtaac tatgcgcacg ctctaataaa cccataggag taaattgcga
    31261 taaaatccaa taaagctcca taacttcctt aacgtcactt tgcaaccaaa aaacgctttt
    31321 ttgaggatct ataccaaggc ttaaaaaagc cgcagcagct tttaaggaat tttgtttaag
    31381 tttttctcca tcttgagaag aagtcatggc atgataatta gcaataaaca taaacatttg
    31441 gcttttttct tgtgcatcta ccatttgctt aatcgcacca aaataattac ctatatgcaa
    31501 atcgccactt ggctgaaggc ctgttaatac tctcatttta tcaccttttt aatctcgctt
    31561 aaaagctcat ctatattttt attttctata tttaaaataa aatttgcctt tagttcatac
    31621 ttgcttaaac gctcattata taattttttt gctttaattt catcataaaa taaaggtctt
    31681 ttagaaattt catctttgtc taaacgcttt tttaaatatt caaaacttgc ttttaaataa
    31741 atacaaaaac ctactttttc taaatttgaa acattaacaa aacccccgcc tgtagcaata
    31801 caagttttct cacaagaact aaaaaaatca gccatttttt gctcttgttc tctaaaaaaa
    31861 atctcgcctt tttgtgcgaa aatttcactg attttttgat taaatttttg ttctattaaa
    31921 aaatcactat ctaaaaaaac aagatctaaa tccttagcca aagctcttgc taaagtgctt
    31981 tttccagaac ccataaatcc tataaaaacg atatttttag ctttcatcat tttctttact
    32041 gcccttttta cgcgaagcaa tcactaaagg cacaccttcg aaattaaatt cttttctgat
    32101 ttgattttgt aaataacgct tatagctaaa atgcaaggcc ttaggacgat tcataataag
    32161 cgcaattttt ggcggtgcta agtcgtattg tactgcataa taaattttaa ccaatttccc
    32221 ataatcatgc ggcaaaggat gtgatcttgt ggcattttct atcagagtat taagcttaga
    32281 agtttggatt ttttgagtga aattctcaaa aatttgcaaa attttatcga gtaaaacatg
    32341 cacccttttt ccacttaaag ccgatacgct aatcacaggt gcgtaagcta gaaatttaaa
    32401 acgatcaaga tgcaattctt ttacagtttt atcaaaatcc atctcacttt tatcccattt
    32461 atttaaaaca ataatcacac ccaaataatg cttagccaca agcccagcaa tgcgttcatc
    32521 aagttcgtta aagccctcat gcgcatctaa aaccaaaagt gctatttgag aatgagataa
    32581 aattttttcc gtgcgattta gggcaaagcg ttcgagtcct tgaattttac ccctttttct
    32641 aatacctgca gtatcaacaa attctatcac tttatcttta tgaactacac tttcattaac
    32701 aggatctata gtagttcctg cgatagaact tacaacactg cgttcttgtt taaccaaagc
    32761 atttaaaaga cttgattttc caacatttac acgccctaca atacccactc tgatatgatt
    32821 ttgatcgact tctttaaatt gaaattcttt tccttcttca taatgctcta aaaaatcttc
    32881 taaattttct tcttcatcag ggattaaaaa ctcttcatgt aaaaattttt caagccattc
    32941 ataaagttca tctaagccta cattatgggt tactgaaaga ttgaagattt cctttactcc
    33001 aaaatttgca aactcccaag ccctttcttc atctttttta ttatctactt tattaaccac
    33061 taaggctata ggttttccaa gtttttttaa agaataaaaa aactgtctat cctcatcatc
    33121 aggcgctaat ttcccatcaa ctagataaag tatgatatcg ctttctttag ctacttttaa
    33181 agtgtttttt ttcacatttt taaaaagttc atcactttca tcaagccctc cactatcaat
    33241 aagcatggct ttttttgaat gaatatgaat ttgcgtttta tttgtatctc tagttgtacc
    33301 tgaaatatca cttgtaatag ctattctttg tcttgccatt ctattaaaaa gacttgattt
    33361 tccaacattt ggcttgccta taagtatgat gctttgcatt tttttcctag aaaattatat
    33421 ttttaaaatt atataaaatt tggcttaata ttaagcaaaa aaagactaga attagcccag
    33481 attttagtca aggaaaaaaa atgctaaaag taatcaagca taatttagga atttatttca
    33541 tgattttagc atgtttggat tttgcactta tgggagcttg tgcaaaaatt cttagcaagg
    33601 aaatgagttc tatagaaatt atgtttttta gaaatatcat aggaattttt ttcatagtct
    33661 atcttttaaa acgatctaag gcacataaag aagggggaca tttttggctc ttggtatttc
    33721 gtggagtagt aggcacgctt tcactatata tgtttttcta taatgtttca aatattacac
    33781 taggtggagc ttttgctttt caaaaaactg ctcctatttt tattacttta atagcttttg
    33841 ttgtttttaa agaaaatatt ggcatcaaag gctggatagg aattttaata gcatttggtg
    33901 gagtgctttt aatcgctcaa ccttgggctc ataatttaaa tcattcaggc tttgatttaa
    33961 aaaattcagt tataggtatc acgagtggat ttttagccgc tttagctctt acaagtgtaa
    34021 gagaacttag aaaatcttac actacagaac aaattgcctt ttcttttatc cttttaggaa
    34081 ccttaatgcc tttaatttct atgatcagtg ctgaattttt tgaaccacag catcttgatt
    34141 ctttacattt agatttcatt ctagcacctt ttgtgatgcc aagtcttaca gcttggctta
    34201 tcattgccat tatgggaact ttaggcacca tttatcaaat tcacgtcact aaagcttatg
    34261 gtatcgctaa acaagcagga gtagttgctg gagttagtta tcttgatgtg gtatttagta
    34321 tgatagttgg gataatttta ggagataatt taccaagtac tatggttttt ttaggtataa
    34381 taggcattat ttttggtgga ttaattttag ttaagaacaa aggaaaaaaa tgaaaaaaat
    34441 gatactcatt gctggtcctt gcgtgataga aagcaaagat ttgattttta aagttgctga
    34501 acagttaaaa aattttaatg aaaatccaaa tatagaattt tatttcaaat caagttttga
    34561 taaggccaat cgcacaagta ttaattcttt tcgaggtcct ggtcttgaag aaggattaaa
    34621 aattttacaa agcgtaaaag atgaatttgg tatgaaaatc ttaaccgata tacacgaaag
    34681 caatcaagca gcagccgtaa gtgaagtagc tgatgtcttg caaattcctg cttttttatg
    34741 tcgtcaaacc gatttacttg tagccgcagc aaaaactaag gcaaaagtta atatcaaaaa
    34801 agggcaattt ttaaacccaa gcgatatcaa atacagtgtt aaaaaagttc tacaaacccg
    34861 tggcatagaa gatgaaggct atgaagctgc tcaaaaaaat ggtgtttttg tagctgaaag
    34921 aggagctagc tttggctatg gaaatctagt agtagatatg cgttctttag ttatcatgcg
    34981 tgaatttgct ccagttattt ttgatgctac ccatagtgta caaatgccag gggctgcagg
    35041 tggaagtagc ggggggaaaa gcgaatttgt agaaccttta gcaagagcgg cagcagccgt
    35101 aggcatagat ggctttttct ttgaaacaca tattaatcct tgcgaggctt tatgcgatgg
    35161 acctaatatg cttaatctta cacgccttaa aaattgcgtt aatacattac tagaaataca
    35221 aaatatcata aaggaaaaca aatgaatatt attgaaggaa aattaaattt agactcaaat
    35281 acaaaaattg ctatcattaa tgcaagattt aatcatatca tcacagatcg ccttgtagaa
    35341 ggagcaaaag atgctttttt aagacacgga ggcaaagagg aaaatctaag ccttatactt
    35401 gttcctggtg cttttgagct tccgtatgca ttaaaaaaag ctatagaaag caaaaaattt
    35461 gatgcaattt gttgcgtagg tgcagtaatt cgtggctcaa ctccgcattt tgactatgtt
    35521 tcagcagaaa ccaccaaagg catagccaat gtgagtttaa atcataatat ccctgtaagc
    35581 tttggtgttt taactacaga tacaatagaa caagccatag aaagagctgg aagcaaggca
    35641 ggtaataaag gctttgaagc tatgacaact gtaatcgaga tgttaaattt aagcaaggag
    35701 ctttaatggc aacgcgtcat caagttcgcc aaagcgtcat ctccttgctt tatgcttttg
    35761 aattaaattc tcaaaacaac gtttttgtag atgaaatttt agatgaaaaa aaaatacgca
    35821 atgaacaaaa aaattttacc ttaaatttat atcatggaat tttagacaat ttaaacaata
    35881 ttgatgaaac cttaaattca tttctaaatg ataatcaaat tacagcttta ggacatgtag
    35941 aaagagctat actaagactt ggggcttatg agttactttt taccgatact cctagcgcca
    36001 ttgttatcaa tgaggctata gaacttgcca aagaacttgc taatgacaat tctccaaaat
    36061 ttataaatgg agttttagat gccttgataa aggctaaaaa atgaagcttt gtgtcgcact
    36121 tgatctttct acaaaagaag aatgcttgca acttgctaaa gaattaaaaa atttagacat
    36181 atggttaaaa gtaggtttaa gagcatattt aagagatggt tttaaattca tagaagaact
    36241 taaaaaagtt gatgatttta aaatatttct tgatcttaaa attcatgata ttcccaacac
    36301 tatggcagat gcttgcgaag aaatatcaaa acttggtgtt gatatgatca atatccacgc
    36361 aagtgctgga aaaatagcta tgcaagaagt tatgacacgg cttagcaaat tttcaaaaag
    36421 acctttagtt ttagcagttt ctgctcttac gagttttgat gaagaaaatt tctttagtat
    36481 ttatagacaa aaaatcgaag aagctgtaat taatttttca aaaatatcct atgaaaatgg
    36541 acttgatggt atggtatgct ctgtttttga aagtaaaatc atcaaagaac acactcaaag
    36601 aaatttccta actctcactc caggaattcg tccatttgga gagaaaaatg atgatcaaaa
    36661 acgcgtcgct aatttaacaa tggctagaga aaatttaagc gattttatag tagttggacg
    36721 ccctatttat aaagataata accctagaaa aatttgcgaa aaaattctac aagaaattta
    36781 ataatcatta tccttgttat gttttaataa taaaaatttt taacaaggaa aaattatgat
    36841 tataacccct gagaatttat ataaaaaaag aagagatttt ttaaaacttg gagcaggtgc
    36901 tttaataagt tcaagcgtgc ttgcttctaa attatctgct ttaaatttca caagcgatac
    36961 taatccaaac aaacttgaaa tcagcgatga agaacttgct acaaattatg tcaattttta
    37021 tgaattttca acagataaaa aaaaggctgt atcattggca caaaatttca atactcaaaa
    37081 ttggaaaatc gatatcagtg gagaaataga aaaaccttta actttaagca tggaagatat
    37141 tttaaaattc tcactagaag aaagaattta tcgttttcgc tgtgttgaaa cttggtctat
    37201 ggtggtacct tgggtaggct ttgaattgcg tcgtttgatt gaaatggcaa aacctacaag
    37261 cgaggcaaaa tttgttaaat tcaccactct tttagataag agccaatttc ccgatcaaga
    37321 cgctttattt ccaactatag actatcctta tgtagaagga cttcgcatgg atgaagctat
    37381 gcatcctctt accttgcttg cagtaggaat gtataaaaaa gccttaaagc ctcaaaatgg
    37441 tgctccaata cgccttgttg ttccttggaa atatggcttt aaaagtatta aatccatagt
    37501 taaaatagaa tttaccaaag aacagcctaa atccacttgg gaaagttacg ctccaagtga
    37561 atatggtttt tatgctaatg tcaatcctaa tgtttctcat cctagatggt ctcaagctaa
    37621 cgagagggct ttaggagact tctttaccaa acctacttta atgtttaatg gctatgaaaa
    37681 agaagtggca agtttatata aaaacatgga cttgaaagtg aatttttaat gcggacaaaa
    37741 tactttaaat ttcttgctta ttttagcttt atcataagtt taatatatgg cttttatcat
    37801 atcataaaag cctttgattt tgtaaaagaa gcctatattt acaccggaat atttgcttta
    37861 atctttttaa atttaagtct tttattttct ttacttaaat ttaaaaaaac aaaaaattat
    37921 cctaaaattt taggtatttt tgcagctttt tgggcgattt tacacttttt aaattatttt
    37981 atttttgata gaaatgctca aatttcaagg cttttcgatg atatttcaca tcgtttatta
    38041 gaagcaagtg gatttatcgc atttttaatc atatttttaa tgcttttaag ttcttttgaa
    38101 atctttaaaa aacttagtaa aatcagaaaa ctaggatatt tatgcttagt tttggcaagt
    38161 tatcattatt ttttaacccc aaaagttcct atgttttggg aatggagtgc tttaattgta
    38221 gctttgtttt attttatagt tcgctataca aaaacattaa aaaagttaaa atccaacaat
    38281 cttactttta tcaaaacttg aatttaattc tttttgtatg ctttctataa aatcttgcat
    38341 tttaaaaacc ccatcttgtg atacagctac tttcaaagct gtattcttta ctaccattaa
    38401 aatttgtgct ccacttaatt cataatttga taaaatattt atatcaaaat ctttttcaaa
    38461 taatgctttt ttaggtagaa atttttccca aattttaagc ctatctttaa aatcaggttt
    38521 tttaaattct atcttataat caaatcttct tgaaaatgca ctatctaagc tttctaaaaa
    38581 atttgtcgta gcgataatca caccactaaa acgctcaatt tgctctaaga atatattttg
    38641 catttgatta tgcattttat cactaccact acttccatct acacgcgtac ttaaaaactg
    38701 atcagcttca ttgagaagta aaataggact ttgtttacaa gtttgcacga tatttttata
    38761 agtatcaaaa atttttctta cattttgctc actctctcca acccatttgc tcaaaatttt
    38821 agaacagtca aaactaagaa cagatttttt cattgattta gccatagcta aagctgacat
    38881 agtttttcca gtaccagcag gaccataaaa aataatttta gcttctatat ttttattact
    38941 ctttataccc caagaatgaa gtctttctag gactttttta tcttgttgtt ttaaaatatt
    39001 ttctaaaagc tcttttgtat tttcaggcat aataatatca ttgatgtcag tgcttggttc
    39061 tataagctcg aaaatatctt gatcttttaa aacactttca attttgattt ttttactttg
    39121 ttttggttca aaatttataa ttctttgtaa aatttcatcg ataataaaaa aacttttaga
    39181 aatatctcca aaagcattta aatattcatc atactcgatt aagtttaaaa gaggagcatt
    39241 ttcttgtaat agttttttat ttttatgcct ttctaaatca ttttcactga ttaaagaaag
    39301 taaagaattc atttctctag aaatcgaact ttcattactt aaggcgtatt cttcttttaa
    39361 aagtgctaga aaaataattt gttctttatg ttcaagattg tattctttaa aaatatcagc
    39421 caatacatta taaaatttac ttttttttag tctttctttg atatgttttt cataaagttt
    39481 aatttgattt tttatttcac tattataagc acttttttgt ataaaactta atctttcgta
    39541 taattgaata cgcacaaatt catcttttaa atattctaaa taatctgcat aagcctcttg
    39601 tttctcaaag tttaaacgag gttttgcttc taaaaattct aaaaaatatt cacttagact
    39661 aagctcactt tgcaataagg caagagttaa tgtttgagtt ttattatttt ctaaactttt
    39721 aaaaaaactc gaattttgat ttacaaaacc tctttcgata agttttttta aatcctccaa
    39781 agcatcaaga taaagatact tatcatttcc aaaaattgtc gataataaag taaaggcatt
    39841 gatagaagaa atagaaacga cataatttct acaaagctct ctaagaatca aagcttcatt
    39901 tttagcacac ttaagctctt tataaatttg agtatcttct atatttttca aacttaaaaa
    39961 attttttaat ttttccatta ttttttaaat tccttaagct catcttcatt aaattctacg
    40021 caaatatttt catctaaaaa atgaccttca aaaggtagat aacaaatttt tagttttcca
    40081 ttattaagca aaaaattatt attaaattgt aaattttgca gatcttcaaa acactcatca
    40141 catgtatttt taagcttctc atgtaaaaga ttttgaaatt tttgattttc agtattatac
    40201 aaatcattta gttttacaaa tgcgtgagca ttaatatcat aaacaaaatt atttaactct
    40261 aaaatagcac gactcatacc atcttcataa aaataatacc attcttcaaa actaattttt
    40321 ccatcttgta aaaaaatagg tttttggcga atttgctcaa agctaaatac acccttatga
    40381 acaggatgaa attctttaaa atcatcatta aaacctataa aatcaagact acgctttata
    40441 cgaatgccat cttgcgtttc gacaagttct aaagtagttg ttcctaaatt ttctccttga
    40501 aaatttttat tatcatacgt aagcatttta gaagaattga ttttatattt tttacgctca
    40561 tcctgccaaa aatcatttgt cttaacgagc ggaatctcta aatttccatt tatatcatca
    40621 acaattaaaa aactagaact tgtttgattt ttatccctgt caaaaagtgg ggtcataggt
    40681 gcattatcat aaactatggc aaaaatttct ttatcctgca aatgataaaa atacaattca
    40741 cctttataaa cttgcgctaa agctagattt acaaagcaaa ataccagtaa aaaaaatttc
    40801 aaactctatc cttcaatttt gaatatgcgt taagataatt ttagtatgtg aaattttatc
    40861 aaaaaaactt actttattat cacaaacttg ataaaaaatt tcataatttt ttgcttttaa
    40921 attttgctca aaaccacaat cagttttttc taaattttta ccctgccata aagcatttgc
    40981 ctttaaaata tcacttaaaa tatcatcata atatacattt ttaaaaaatt tttgattaaa
    41041 cactttttta tcataacaca ctgcattgat acaaatttta tctttgattt tgagttcaaa
    41101 aaaagcttgc cctagtttat aaacttccaa atttaaagca ttattttctt tttttaaaaa
    41161 agctgcgtca ttgattttta tcataggaga agcaatcaaa accatcaagc tttgacttga
    41221 aaaattttga tttttcacac tacaagcaca aagaaaaaaa ataaaacaca gagctaaaca
    41281 atgcttcaaa tttgacctta tttaagattt ttaaaactga tatttaactc taaatcaagc
    41341 tcttttacaa gcttcattac agcttgtaaa tcatcaattt gttttgctac aacacgaatt
    41401 tcttcaccac gaatcgaaga attaacttta agtttgctat ctttgatagc tttattgatt
    41461 tttttggcat tttcactatc aatagcatcg tttgctttca aatttaaacg aaacattgct
    41521 ccactttcac gagaaagctc tttaatagca ttaggattaa ttcctctttt gataagttta
    41581 gaaatcacta tatcttttaa aacatcaagc tttccttcac tagaagaact gagtttaaaa
    41641 atactctctt tttcgcttaa atcaatctca cacttaattc cttttaagtc ataacgacta
    41701 tcaagttctt ttttagcttg ttcaaaagca ttttttaact cttgtttatc caaagctgct
    41761 gaaatatcaa aactatgttc acttgccatt ttctatccat tcttttaaat tattataaac
    41821 tatatccatt aaagcattta aagcctcctt gctcgcccac gcaacatgag gagtgataat
    41881 aagattttct ttatttttaa tgcttaaaag tggatgattt ttcatcatag gttcaatttc
    41941 taaaacatca agccctacac gaatattttt ttcatctatg attttagcta aatcattttc
    42001 attgacaatc ccacctcttc ctacattaat caaaatcgca ttatctttta aatgctttaa
    42061 ttcttcaaag gcgagtaaat ttttggtttt ttcatttaaa ggtgcgtgga tacttataat
    42121 atcgcaagtt tttaataaat cttttaattc caaatgtaca aaatctgcgt ttttattagc
    42181 tccactcgta gaataataat aaatttcggc tccaaaagcc tttgaaattt ttgccacttc
    42241 tttacctatg cttcctaaac ctataatacc atgtttttta ccacttaagg tgtttaaaat
    42301 tctactataa tctgtaaaaa taggactttc acaccattta ccctctttgc tccatttgtc
    42361 ataataaggt atttgattta aaaaagcaaa cataaacgca aaagtatgtt gcaccacact
    42421 catagtagaa tacccagcag cattttttac aataatacct ttttctttag catactcaat
    42481 atcgatatta ttaatccctg ttgcagtttc taaaatgagt tttaaatttt tacaagcatc
    42541 aatcacatct ttatcaatta caaccttgtt tgtcatggcg acattagcat cttttaaacg
    42601 ctctatggtt tgctctttat ttgttgtagt ataaatttgc aaagaaccaa atttttcaaa
    42661 aatacttaaa tcataatccc ctaaagttgc cgcatctaaa caaacaattt tcatttctaa
    42721 tcctttataa tatgtcctac aaatttagaa taattatcaa gcacaagtcc tccttttcta
    42781 aatcctaagc cacacccttc ataagcaaag aaaacacctg cttgatagta ttcgttttca
    42841 catgaattaa actctacata ttcttgataa ataaccttat tattcccata aggacctaca
    42901 ttctcatgta aagtttttcc atctttaatt atactgatat ttgcgccttc tctaccaaaa
    42961 acaggttttt taacatagtt tttaccttcc aaaggagtat cttttgtttc taaaagtaat
    43021 ggatgatttg gataaagttc ccatagaatt tttaaaattc ccttagattg aaataaaagc
    43081 gtataagcag gatttaaaat aattgctctt tgattacgca taatttgagt taaaagcatg
    43141 gcaagttcac cctcttctat ggctatatct tcccaaggaa taagcttaaa ccaatactca
    43201 taattttcac cctctttaaa aacaccctct tcactaaatt ccacctcatc tacaaaggaa
    43261 aaattagttt gaaaacctgc ttcattggct atatgagaaa gcaattttgt agtgatttct
    43321 tcttctttac ttcctgcaac acttgaaaaa agaattttcc atccttgata atgctcttca
    43381 aacccttcaa cactttcatc aagggtaata agtcttttaa aattatccat caaactttca
    43441 taaatgctgt taaattgtgc actttcatcc attccatttt gttttaaaag cgcccattgt
    43501 aaaatcgcac tttcaaaaag agcagtaggg gtatcagcat taaattctat aagttttata
    43561 ggcttgccat caagtccacc cgctaaatca aaacgcccat ataaatgcca atgcacttca
    43621 ttttcccaac tcatcttaat cgcatcaata agattaaaag gaattccaag ctcatcaaaa
    43681 cgatcattat caatcacttc ttgcgctgca gcaataaaca tatcataaag ttcatttact
    43741 gcttcataat aagcattagc ttcgctttct ttaacacaaa ctaacttatt gctaatataa
    43801 tcacttccat cttcatctgt atgccaagaa aaacctatat tttctaaata atctttttga
    43861 agtttatcta cttgtagtaa ttgcattatt tatccttaag agccaaaaga ggaactagaa
    43921 cttgcagctt tagagcctcc accaaaaaaa cctgattttt tagcacttga agtagaactt
    43981 gttgtgcctg ctttattaaa actattgaca cttctttgat aagcactttg atttgaaaaa
    44041 gcaccgcgtt gttgattagc aaaattttga ttattgaaaa gttttgaacc tatccaactt
    44101 cccaaaatag cacctgcagc acttgcgagt aaagtttctc ctaaactcaa tcccccacta
    44161 ctgatttgcc cattatcttt agttaaattt gaagttccat tgtcaatttt agctgcttct
    44221 tctttaatca aagcatccat ttcttctttg gataaaattc tttctgtacc attaagatct
    44281 tttaaaacta cccttgtttc atcacttgga tattgatctt tgattttata ctgccctgga
    44341 gctgtttctt cgataattac aaaagctcct tgagcattag ctgcttgatt taaagtatct
    44401 gcattgtcat tattacttcc acaacctgct aaagcacctc cagcaacagc tgctaaacca
    44461 cctatcatac caatttgaat gatttttttg atttttttca tagagtttat cctaaaaaca
    44521 gaaaatttaa atttagaaat tttaacaaaa aataataaat actttttaat ttaataccaa
    44581 atgaagttcg tagatataaa aaaagccctt tcgggctttt gggttagagt cttgactcgt
    44641 agcgtctaag catataaagt cttttaagca tttttttgcg tgctgaaatt ttttgttttt
    44701 tgcgaatttc agtcataggc tcgaaaaatc ttcttgctct tacttcagtt acaactagat
    44761 ttctatctac ttgttttttg aatttacgat acgcttcatc aaaagactcg ttaggatgca
    44821 ccttgattcc tggcacagtc ctcaccacct ttctgtgtaa atttttgttg tgaaatataa
    44881 ttataaaaca cttcttatta attctaactt agaaagcatt taaaaattgt tttagttttt
    44941 atcggttata atccttaatt acaaagtgct aaaaaattat aattaaggtc taaaaatgca
    45001 aggacacatt acaaactata caaaaaaacg atattttgta tatttaattg caagtattat
    45061 catatttgcc ctacctttca taagaattaa tgagaatcat ttttttcttt taagttttga
    45121 tcattctaaa ttaaacctat tttttatttc tttttcaaca caagaatttt atctcatgcc
    45181 ttttgttctt atatttcttt ttttatttat tttttttatt acaactttag gtggaagaat
    45241 ttggtgtgct tggagttgtc cacaaacgat ttttagagtt atatatagag atatcataca
    45301 aactaaattt cttaaaattc gcaaaaatat caataacaaa caaaaagaat atggggggca
    45361 atattttaaa aaatttcttg gagtaataat tttttatttt atatctttag ttgctgttag
    45421 taatttactt tggtacttta ttcctcctga agattttttc aattatattc aaaatcctgg
    45481 cgagcatcta cttttacttg gaattttatt ttgtgctagc ttacttttta ctttggatat
    45541 tacctattta caagaaaaat tttgtgttta tgtctgtcct tatgcaagaa tacaatctgt
    45601 aatgttcgat catgatacaa tgcaagtgat ctacgatgaa aaacgcgggg gcttgatcta
    45661 tgatggacac accaaacttc ataaaaaacc gcctgaggga gaatgcatag gttgtgaagc
    45721 ctgtgttagc atctgtccaa ctcatattga catacgcaaa ggaatgcaac ttgaatgtat
    45781 taattgtctt gaatgtgccg atgcttgctc taaggtacaa agcaaattta atcgtccaag
    45841 tttgatcaat tggacaagtg caaaagctat tgaaacgcgt tctaaggttc attatttaag
    45901 atttagaacg atagcatatt ttatagttct tttaattgct ttattggctt taatcatcat
    45961 gggaagcaaa aaagaaagca tgcttttaaa tatcaatcgt agtagtgaat tatataatat
    46021 ttcaaatgtt aaaggtgaat tagtcatttc aaatgcttat acctttttgt ttcaaaatac
    46081 agattctaaa cctcatgaat attattttac agcaaattta gaaggaataa atgatggaat
    46141 tgaaatcata agaccaaaca aaccttttaa attaaaagca ggagaacaag tcaaaaaaat
    46201 agttgttatc agggctacaa aaaatttagc aaataatgat aaaaaagatg taatctttcc
    46261 tttacatata aaagcttacg caaaggataa tgaaaaaatt tcggttttta gaaaaagtat
    46321 atttgtatac cctaaaagca ctcttataaa ggataaaaat gaactcaaat agaacaccat
    46381 cacaaaaagt tttagccaga caagaaaaaa tcaaagcagt ggccttagag ctttttttaa
    46441 caaaaggata ccaagaaaca agtttgagtg atattattaa attatccgga ggatcttatt
    46501 ctaatattta tgatggtttt aaaagtaaag aagggctatt ctttgaaatt ttagatgaca
    46561 tatgtaaaaa acactttcat cttatttatt ccaaaacaca agaaattgaa aatggcactt
    46621 taaaagaaat tttaacttct tttggtttag cttttataga aattttcaat caaccagaag
    46681 ctgtagcttt tggtaaaatt atctattctc aagtttatga caaagataga catcttgcca
    46741 attggataga aaataatcaa caaaattttt cctataacat acttatggat tttttcaagc
    46801 aacaaaataa ttcttatatg aaaaaaaatg cagaaaaact tgctgttctt ttttgtacta
    46861 tgttaaaaga accttatcat catcttaatg ttttaattaa tgctcctttg aaaaataaaa
    46921 aagaacaaaa agaacatgtt gaatttgttg taaacgtttt tctaaatggg atcaatggct
    46981 ccaaagctta aaaataattt tattaaccaa aattaagata taattagcca aaaatttttg
    47041 taataaatat tacaattttt aatttaattt ttcaaggcaa aaccatgaaa ttatttcaaa
    47101 aaaatactat tttagcttta ggtgttgtgc ttttactcac tgcttgtagc aaagaagaag
    47161 caccaaaaat acaaatgccg cctcaacctg taacaaccat gagtgctaaa tctgaagatt
    47221 taccacttag ttttacttac cctgctaaac ttgtcagcga ttatgatgtc attataaaac
    47281 ctcaagttag tggcgtaata gtaaataaac tttttaaagc tggggataag gtaaaaaaag
    47341 gacaaacatt atttattata gagcaagata aatttaaagc tagtgttgat tcggcttacg
    47401 gacaagcttt aatggctaga gcaacttttg aaaatgcaag caaggatttt aatcgttcta
    47461 aagctctttt tagtaaaaat gcaatctctc aaaaggaata cgactcttct cttgctacat
    47521 ttaacaattc aaaagctagt ctagcaagtg ctagagcaca acttgcaaat gcaagaattg
    47581 atctagatca taccgaaata aaagctcctt ttgatggtac tgtaggagat gctttagtta
    47641 atataggaga ttatgtaagt gcctcaacaa ctgaactagt tagagttaca aatttaaatc
    47701 ctatttacgc agatttcttt atttcagata cagataagct aaatttagtc cgcaatactc
    47761 aaagtggaaa atgggactta gacagcattc atgcaaattt aaatcttaat ggagaaacca
    47821 ttcaaggcaa actttatttt attgattcgg ttatagatgc taatagtgga acagtaaaag
    47881 ccaaagccgt atttgataac aacaactcaa cacttttacc aggtgctttt gcaacaatta
    47941 cttcagaagg ttttatacaa aaaaatggct ttaaagtgcc tcaaatagct gttaaacaag
    48001 atcaaaatga tgtttatgtt cttcttgtta aaaatggaaa agtagaaaaa tcttctgtac
    48061 atataagcta ccaaaacaat gaatacgcca ttattgacaa aggattgcaa aatggcgata
    48121 aaatcatttt agataacttt aaaaaaattc aagttggtag tgaagttaaa gaaattggag
    48181 cacaataatg ttttctaaat tttttatcga aagacctgtt tttgcttcag ttgttgcaat
    48241 tatcatttct ttagctggag tcataagtct tacaaattta cctatagaac aatatccttc
    48301 tttaactcct cctacagtta aagtaagtgc aacttacaca ggagctgatg cacaaaccat
    48361 tgcttcaaca gttgcaagtc ctatcgaaga tgcaatcaat ggcgcggata atatgattta
    48421 catggattca acttcaagtt cttcaggaac tatgagtttg actgtctatt ttgatatcgg
    48481 tacagatcct gatcaagcca ccatagatgt taataataga atttcagccg caactgcaaa
    48541 aatgccagat gcagttaaaa aacttggagt aacagttaga aaaacttcct caacaacact
    48601 tgctgcaatt tctatgtatt caagtgatgg ttcaatgagt gcagtagatg tatataacta
    48661 tatcacttta aatgtgttag atgagttaaa aagggttcca ggagttggag atgcaaatgc
    48721 tataggaaat cgtaattatt ctttaagaat ttggctcaag cctgatttat taaataaatt
    48781 tggaatcaca gctactgatg taatttctgc ggttaatgac caaaatgccc aatacgcaac
    48841 tggtaaaatt ggcgaagaac ctgtaactca aaaatcccct tatgtttatt caatcactat
    48901 gcaaggaaga ttgcaaaatc ctagtgaatt tgaaaacatt attttaagaa caaatgatga
    48961 tggatcattt ttaagactta aagatgtagc tgatgtggaa ataggatcac aacaatacag
    49021 ctcacaagga cgattaaatg gcaatgatgc agttccgatt atgatcaatc ttcaatcagg
    49081 ggcaaacgca ttgcatacag cagaacttgt tcaagctaaa atgcaagaac tttcaaaaaa
    49141 tttcccaaaa ggtttaacat ataaaattcc ttacgataca acaaaatttg taatagaatc
    49201 aatcaaagaa gttgttaaaa cttttgttga agctttaatt ttagttatta ttgttatgta
    49261 tatgttctta aaaaatttcc gtgcaaccct tattcctatg atagctgtac ctgtttcatt
    49321 gttaggaact tttgctggac tttatgtttt aggttttagt attaacctac ttacgctttt
    49381 tgctttggtt ttagccatag ggatcgttgt agatgatgcg atcatagttg tagaaaatat
    49441 cgataggatt ttacatgaaa atgaacaaat aaacgtaaaa gatgctgcca ttcaagcgat
    49501 gcaagaagtt agctctccgg ttatttcaat tgttcttgtg ctttgtgctg tttttgtacc
    49561 agtttctttt atatcaggtt ttgttggaga aattcaaaga caatttgctc ttaccttagc
    49621 tatatctgta actatatcag gttttgttgc tcttacctta acaccttctt tatgcgcact
    49681 ctttttgcga cgtaatgaag gagaaccatt taaatttgta aagaaattta atgatttttt
    49741 tgattggagc acctctgtat ttagcgcagg agtagcatat attctaaaaa gaaccattcg
    49801 ttttgtttta attttttgta ttatgcttgg agcgattttt tatcttaata aagctgtgcc
    49861 aaattcttta gttcccgaag aagatcaagg tttgatgatt agtattatca accttccttc
    49921 agcttcagca ctccatagaa caatttcaga agttgatcac ataagccaag aagttttaaa
    49981 aactaatgga gttaaagatg caatggctat gataggattt gatcttttta caagttcact
    50041 caaagaaaat gccgctgcaa tgtttatagg tttgcaagac tggaaagata gaaatgtaag
    50101 tgctgatcaa attatagccg aacttaataa aaaatttgct tttgatcgca atgcttcaag
    50161 tgtatttata ggcttacctc ctatacctgg attgagtatc acaggcggtt ttgaaatgta
    50221 tgttcaaaac aaaagcggaa aaagctatga tgaaatacaa aaagatgtaa ataaacttgt
    50281 tgctgcggcc aaccaaagaa aagaactatc aagagtaaga acaacacttg atacaacttt
    50341 ccctcaatac aagcttataa ttgatagaga taaattaaaa cactacaatc ttaacatgca
    50401 agatgttttt aacacgatga atgcaactat aggcacttat tatgttaatg atttttctat
    50461 gctaggtaaa aacttccaag taaatatccg cgcaaaaggt gattttagaa atacacaaga
    50521 tgcattaaaa aatatttttg taagatcaaa tgatggaaaa atgataccac ttgattcttt
    50581 cttaacttta caaagaagtt cagggcctga tgatgtaaaa cgattcaacc ttttcccagc
    50641 ggcacaagtt caaggtcaac ccgcaccagg ttatacttca ggtcaagcta tagaagcgat
    50701 tgctcaagta gcaaaagaaa ctttagggga tgattattcc atagcttgga gtggatcagc
    50761 ttatcaagaa gtttctagta aaggaacagc aagctatgct tttgctttag gtatgatatt
    50821 tgtcttttta attctagctg cccaatatga aagatggctt atacctttag cagttgtaac
    50881 agctgtacct tttgcggtat ttggatcatt tttattggta tatttaaggg gatttagcaa
    50941 tgacatatat tttcaaacag gacttttgct cttgattgga ctttcagcta aaaatgctat
    51001 cttaatagta gaatttgcaa tggaagagcg ctttaaaaaa ggcaaaggag tttttgaagc
    51061 agctgttgca gcagcaaaac ttcgttttcg tcctatcata atgacttctt tggcatttac
    51121 ttttggggtc ttgccaatga ttttcgcaac aggagcagga agtgcttcaa gacactcttt
    51181 aggaacaggg cttattggtg gaatgatcgc agcatcaact ttagcgatat tctttgtgcc
    51241 tttatttttc tatcttttag aaaattttaa tgaatggcta gataaaaaaa gaggtaaggt
    51301 tcatgaataa aataatttca attagtgcta tagcaagttt tactcttttg atttcagctt
    51361 gctctttaag tccaaattta aatattcccg aagcaaacta tagcattgat aataagcttg
    51421 gagccttatc ttgggaaaaa gaaaacaata gctctatcac aaaaaattgg tggaaagact
    51481 ttgatgatga aaatttaaat aaagtggttg atttagcact taaaaataat aatgatttaa
    51541 aacttgcctt catacacatg gaacaagctg ctgctcaatt aggtatagat tttagcagtt
    51601 tgttgccaaa atttgatggt agcgcaagcg gtagtcgtgc aaaaacagct ataaatgctc
    51661 caagcaatcg aaccggggaa gtaagttacg gtaatgattt taaaatgggg cttaatttaa
    51721 gctatgaaat cgatctttgg ggaaaatatc gcgatacata tcgcgcctca aaatcaagct
    51781 ttaaagcaag tgagtatgat tatgaagctg caagactttc tgttatttca aatacagttc
    51841 aaacttattt taatcttgta aatgcttatg aaaatgaaaa tgctcttaaa gaagcctatg
    51901 aatctgcaaa agaaatttat aggatcaatg atgaaaaatt tcaagttggc gctgtaggtg
    51961 aatatgaact tgctcaagca agagccaact tagaaagtat ggctttacaa tataatgaag
    52021 caaaattaaa taaagaaaat taccttaaag ctttaaaaat tttaacttca aatgatttaa
    52081 atgacatact ttacaaaaat caaagctatc aagtttttaa tcttaaagaa tttgacattc
    52141 caactggaat ttcaagcacc atcttgcttc aacgtccaga tattggctct tctttagaaa
    52201 aattaactca gcaaaattat cttgttggag tagctcgcac ggctttctta cctagccttt
    52261 ctttaacagg attattggga tttgaaagtg gggatttaga taccttggtt aaaggaggtt
    52321 ctaagacttg gaatataggt ggaaacttta ctctgcctat ttttcattgg ggtgaaattt
    52381 accaaaatgt aaatttagct aaacttaata aagatgaagc ttttgtaaat tatcaaaata
    52441 ctttgattac tgcttttgga gaaattcgct atgctttagt agctagaaaa actatacgct
    52501 tacaatacga taatgcacaa gcaagcgaac aatcttataa aagaatctat gaaattgcta
    52561 aagaacgcta tgatatagga gaaatgtctt tgcaagatta tttagaggca cgtcaaaatt
    52621 ggcttaatgc tgcggttgct tttaataata ctaaatattc ttatgccaat tccatagtag
    52681 atgtaatcaa agcatttggt ggaggatttg agcaaagtga agatacgagt aaaaatataa
    52741 aagaagaatc aaaaaattta gatatgtctt ttagagaata gtttgttcta ttctctaaat
    52801 aaatcaaaaa tctttgtcta aatctgcatc tgtaatttca taagccttgt aaatagcagg
    52861 caataatttt cttatagcat aatcaaaatg ataaaattgc ttatatacct cttctggatt
    52921 taaattttta gcattcttaa aatcaaatac ttcagtatta ttgattttgg caatattttc
    52981 atcaaaataa gagtaaaact ctgctctttg tttaaacaaa gcatttaaat tttgaacaat
    53041 tttggcttta tccattttat atccttttta aataatttaa aaacttaatc ccatttttta
    53101 tttaagaaat aaaaaattta ctcctatttt agctaaaaat tgataaagtt atgtcttaaa
    53161 tattttaata tataggccac ttatgaattt atttcaaaat ttagctttaa aatactctca
    53221 tactatgatg gaaaaatccc tccaaaaagg tttcaatgtc gaacttttaa aacaacccaa
    53281 agaaaaaatt ccaaaacaag acaaaagcta tatgctttat gcccatgtac ctttttgcca
    53341 tactttttgt ccttattgta gttttcataa atactattat gatgaaaatt tagccaaagt
    53401 atattttcaa aatcttagag aagaaattaa aatcatgaaa gataaaggtt ttgattttag
    53461 ctccatgtat gtgggtggtg gtacaacact gattaatgaa gaggaattat taaaaacctt
    53521 agaactttgt aaaaagttat ttaacataaa agaaatttca tgcgaaagcg atccaaatca
    53581 tattgatcca aataagcttt ctatgtttaa aggtataatt gatcgtttaa gttgtgggat
    53641 tcaaagtttt gatgatgaaa ctttaaaaaa agtggcaaga tataataaat ttggttcatc
    53701 taaagaactt caagaaaaaa tttcaaaagc tttaggaatt ttacctattt ttagtataga
    53761 tcttattttc aatcttccag gacaaagcga aaaacaactt ttaaatgact tagaaattgc
    53821 taaaaattta gccccgcaac aaatcacaac ctatccttta atgaaatcaa atcttaccaa
    53881 agataatatc gctaaaagtt taggagtaag cattaaagat aatgaattta cttattatca
    53941 aatcatacgc gaatttttta aagactatac tcaaaacaat ggttggagtt tttctttgga
    54001 aaaaaataaa ctcaatgacg aatatgtcag ttctcatcat gaatacctag gagtgggcag
    54061 cggggctttt agctttttag atggggagct tttaattaat gcatttaatc taaatgatta
    54121 tgctaaattt atacaagaaa aacaaaatgc taatatagcc aaagcttgtt ttgataaaaa
    54181 agaaattatc aaatatatct ttttaactga aattttttca gggaaaatag aaattgataa
    54241 attcaacaaa actctaaatt gcaacctcga aaaagaactt ttcatagaac ttttagggct
    54301 taaaacaagt ggtgccatca taaaagatca aaatgcttta atcgcaactg aatttggtca
    54361 atatcttttt gtggttttaa tgaaagattt ttacacagga atggatcttg tgcgtgcagt
    54421 atttagagat gataagcgtc ttaaaaataa agattatatc gatatcatga aagaaaatat
    54481 tgatccgctt aactccgcta gtatggaatt taaagcggag acaaactaaa aggggcgaat
    54541 aaccatcatt aaagcgataa taataaacat tatagttggg aattcattat aaattctaaa
    54601 gtatttccca cttttagcag aagtatcatt tgctaaagct tttaaacaat aataattatg
    54661 tatatgaaaa ataatcaaaa gtgtaacaca ggtaagttta acatgcataa aacccgcacc
    54721 taccattaaa acttccttat gagcatgtaa cattaaactt cctgtgatta aagttacaat
    54781 cattgcagga gtttgtatat aaaaataaag ttttctttct tgaattttta caatctcgac
    54841 aaaaccttta ttgtctttat gttcagcatg atacacaaaa agacgaggta aataaaaaag
    54901 tccagccatc caagaaacaa atgccaaata atgcacccat ttaatccaaa aataataatc
    54961 attaatccat tctgtcatct tttttccttt ttttaaatat ttcttgtatt aaaatcaaag
    55021 ccacacttat atttatcatg acatctgcaa cattaaaaat agcaaaatta aaccatttat
    55081 gccaaaaaaa catatccact acacctccgt gtataaaacg atccaataaa tttgaaacgc
    55141 cagcaccaag catcattcca aaagctatgc tatgagtttt taaaagtgtt ttttgccaaa
    55201 aaagataaat aaaaagcacg acaattaaag caagatgtaa atattttaaa ttatgttcta
    55261 aaaaactcaa cattgaaaaa gctacgcctg tatttagagc ataagttaaa tctaagtatt
    55321 cactctgcca tctaagtcct gctaaagtta aggattttac ccattgatca aggacaaaaa
    55381 ccaaaacaaa ggcaccccaa aaataaaaaa taaatttaaa agttttagcc atttaaagct
    55441 ttcttaaaaa actccacaac atttttcatt tctttttcta agagcttaat atctttggct
    55501 tctagtaaaa gtcttatcaa attttctgtt ccagaatagc gaaataaggt attgatattt
    55561 ttattttcta aatctttttt taattctttt aaacctttaa ttttatctaa atcttttttt
    55621 tctgcaattt taagattggt taaaagctga ggataaggtt tgacttgacc caaaatagag
    55681 cttgcagatt ttttcttaga aagcattaaa gcactaaatt gcaaagcagc tatcaaacca
    55741 tctccagttt ttgcataatc actaaaaata atatgcccac tttgctctcc gccaaaattt
    55801 ccaccattgg cttttaattt ttcaagcaca tatttatcgc ccacattaca agtatcaagt
    55861 tctatgccat gtttatttaa aaattctttt aaagcaccat tactcattat agtggctaca
    55921 acacttgatt gtaatttacc ttgttcttta agataaagtg ctaaaactcc taataaacta
    55981 tctccattag ccacttcgcc tttttcatct acaaccacca aacgatctgc atcaccatca
    56041 aaagcaaagc ctacatctgc acgcaaacgc tttacctcag cagctaaatt tgcaggatgt
    56101 aaagctccac aattttcatt gatattaagt ccattgggtt tatcgctcat tactataact
    56161 tcagcaccta attccttaaa aacagtaggt gctaccttat aagctgctcc atgagccaca
    56221 tctaaaacca cacgcaaaga ctttaaagta agatcttttg gaaaagaatt tttaatagaa
    56281 acaatatacc ttcctataac atcatcaatt ctttttgctt gaccaatttt ctccatatct
    56341 accttagagg cttgtataag cttatcatca aaataaattt cttctatttt tttctctata
    56401 tcttcactga gtttatttcc atgagcatca aaaaatttaa taccattatc ataataagga
    56461 ttgtgagaag ctgaaatcat aatccctgca tcacaacgca tatcttcagt taagaatgca
    56521 atcgcaggag ttggcatagg accaatttgt ataacattat accctataga agtaagccct
    56581 gaaacaatag cattttctat catatagccg cttcttcttg tatcttttcc tactaagata
    56641 ttattagtaa tacttttatc tttaaaataa atacccgcag ccattgctaa acgcatagcc
    56701 aaaaaactat ctaaaaattc acccgctttt ccacgaactc catcagttcc aaaaagtttc
    56761 attgcaaacc tttctagcaa aatttaaaga caattataac aaagctaaga taaagaaatt
    56821 taaacaagct ctaaaattag agcttgtttg gaaccttata gttcaggttt aggagttttt
    56881 tcagtagaaa taggaagttg tggataaaca attgctggtt ttgttcctgt taaagatttt
    56941 aagaaagttt caatactttt tgcttcttta tcagaaattt taatgccaag ttgcacacta
    57001 cccatttcct taatagcatc ttttaaattc caaatcgcac cattatgaaa atatggagca
    57061 gtttcagcaa catttcttaa agttggagtt tttaccatgc catttgcatc acctttaaaa
    57121 tcacctaaat ttgcaaattt atatttacca gcaacttcaa acgcttgcat attgccacct
    57181 aaattcacac cattatgaca agctacacaa cctttatcta taaaaagctt taagcctttt
    57241 tgttcttctt ttgttaaagc tttttcatcg ccttctaaaa atttatcaaa acgagatgga
    57301 gtgatcaaag ttctttcaaa atttgcaatt gcatcagcaa tattgtcaaa atttacaccg
    57361 cttttaccat agattttttt aaactcactc acatattcag gcaaagatga aattttttct
    57421 actgcaagtt tagcaggagt tgccatttca ggatcagctt ggattggacc tttagcttga
    57481 tcggctaatg ttcctgcacg accatcccaa aattgagtat tatttaaaac tgcattataa
    57541 actgttggtg aatttaaatg atgaggattt gctgtccatt tatgacctat tgcagtactg
    57601 attccatctg ttccaccaag tcctacatta tgacaggtat tacaagaaat gataccactt
    57661 tttgaaagac gtggttcaaa atagagcttt ttgccaagct ctgctttttc aagagtaaat
    57721 tcactagcct ttactccatt ttgttttaaa atttcatcaa cgcctttttg atcttttggt
    57781 aaggcaacaa gacctgaatt tttagcttca tctataagac ttgcagcatt taagcttgaa
    57841 aaagcaacta aggatgcgat tagcaatgat tttactttca tttataaact cctattaaag
    57901 ataaa
//
LOCUS       DAPWGO010000002        51025 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.002, whole genome shotgun sequence.
ACCESSION   DAPWGO010000002 DAPWGO010000000
VERSION     DAPWGO010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 51025)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 51025)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..51025
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.002"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            15..1136
                     /gene="dnaJ"
                     /locus_tag="RJ336_000060"
     CDS             15..1136
                     /gene="dnaJ"
                     /locus_tag="RJ336_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDZ5212546.1"
                     /translation="MEISYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAED
                     KFKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSSSSGFGGFEDLGDIFSSFFGEG
                     FGSSRRRKSSNDEKIPSDFIVNLKLSFKEAVFGCKKNIDFTYKCSCKTCNGTGAKDGK
                     LQTCPKCQGRGQVGVSQGFITFAQTCPDCQGSGEKASEKCSDCKGLGYNESKDSVELN
                     IPEGVDTGMKLRVNAKGNIPKNGTRGDMYVKIIAAEDDTFIRDDDDIYIEFPVFFTQA
                     ILGESIKVPTIRGEATLNLPKGAKDGQRFVLEKEGVKDVHSSRIGNQIVQISIKFPTS
                     LNDEQKELLEKLSESFGIKDGMHQEQKGLFEKIANWFKS"
     gene            complement(1252..2529)
                     /locus_tag="RJ336_000061"
     CDS             complement(1252..2529)
                     /locus_tag="RJ336_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane protein"
                     /protein_id="HDZ5212547.1"
                     /translation="MKLVKLSLVAALAAGAFSAANATPLEEAIKDVDVSGVLRYRYDT
                     GNFDKNFINNSNLNNSKQDHKYRAQVNFSAAIADNFKAFVQFDYNAADGGYGANEIKN
                     DQKGLFVRQLYLTYTNEDVATSVIAGKQQLNTIWTDNGIDGLVGTGVKVINNSIDGLT
                     LAAFAVDSFMAAEQGADLLGHSNISSAKPNIAPFKLDSIGNLYGGAAVGSYEFLGGQF
                     NPQLWLAYWDQVAFFYAVDAAYSTTIFDGINWTLEGAYLGNSIDSELDDKTHTNGNLF
                     ALRGSVELNGWDASLGGLYYGDKEKASTVVIEDQGNIGSLLAGEEIFYTTGSRLNGDT
                     GRNIFGYVTGGYTFNETVRVGADFVYGGTKTEAANHLGGGKKLEAVARVDYKYSPKLN
                     FSAFYSYVNLDEGVNTKESADHSTVRLQALYKF"
     gene            complement(2781..3236)
                     /locus_tag="RJ336_000062"
     CDS             complement(2781..3236)
                     /locus_tag="RJ336_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HDZ5212548.1"
                     /translation="MKKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFISSAGTSG
                     KHDGEGMHHGTKNKLAQLNIEHKNFTSKKLTQKLCDESDFLITMDNSNFKNVLKNFTN
                     TQNKVLKITDFSPTLNYDEVPDPWYSGNFNETYKILSLACKNLLVFLSK"
     gene            3290..4474
                     /locus_tag="RJ336_000063"
     CDS             3290..4474
                     /locus_tag="RJ336_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ5212549.1"
                     /translation="MENFNRTLLVCWFGVFTTSMGLSQIAPILPFYIKELGHVDTSEI
                     AFYSGLAFGITPLFMAVFSPLWAFLGAKYGYKNMLLRASFGMSVLTLWLSFAHSALEV
                     VFVRGLTGIISGFTSAAVVFIAVIAPKEKVAYALGTLSTASISGSLLGPLFGGFVAEF
                     FSISAVFDVVAFLIACSFVTIYFFIHERKIQKEAKKNTQKVKENKTLIIVLFITTFVI
                     QFGTFGVMPILSIYVEQIHQGGNLALWAGIVVAASGISNLFFAPKLGKIADKIGPSKI
                     ILIALIFCGICFYLQAVASNVYTLIFVRLFIGVGLGGLLPCVNALLKKSVSAKNLSVI
                     FGFNQTCQFLGNFCGAFGGGLMASHFSVEFVFAFVCLIFIINAFIFLAFEKKYIFSNQ
                     GL"
     gene            4492..5154
                     /locus_tag="RJ336_000064"
     CDS             4492..5154
                     /locus_tag="RJ336_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HDZ5212550.1"
                     /translation="MEMILFALVMILLVFLFIVLFRQYKSSKIEEKSTQSFSDIMQLK
                     SIGELSVFQVFSKEIVTKKDSAFNGIWKNLLGWSLSERQIALIFEFEITFLYDLRDKN
                     FDILPLGDDTYKIIMPECRYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDK
                     NKLIKEAKDEVKDLSLNLIQNLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLD
                     VN"
     gene            complement(5151..5361)
                     /locus_tag="RJ336_000065"
                     /pseudo
     CDS             complement(5151..5361)
                     /locus_tag="RJ336_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344646.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
     gene            complement(5419..5901)
                     /locus_tag="RJ336_000066"
     CDS             complement(5419..5901)
                     /locus_tag="RJ336_000066"
                     /EC_number="3.2.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-deoxyinosine glycosylase"
                     /protein_id="HDZ5212551.1"
                     /translation="MSKFLTHPFEPFFDKDSKILILGSFPSVKSRQDGFYYQHSRNRF
                     WPILETLFDVKLENITEQQAFLRKKHIALWDVLQSCKIKNSDDKTISYAKANDLSLIL
                     SQAKIQAIFTTGQSAYKFFVKFHPRLEAIALPSTSPANLNFSFEQLLQNYEIIKKFTK
                     "
     gene            complement(5898..8057)
                     /locus_tag="RJ336_000067"
     CDS             complement(5898..8057)
                     /locus_tag="RJ336_000067"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDZ5212552.1"
                     /translation="MQYSIEINKNTEIFDIDKVAKQAAGAVLMRQGKSVVLATVAREE
                     KQVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGY
                     TYPTQIVVMVLSADPKVDLQVMSLNAASVALYLSDIPMKAPVCGVRIGKIDGNFILNP
                     NNEELQNSTLDLYVAGVKDELLMIEMRALPDQKENEIFIEAPYADVLTQTTSQNMNEL
                     SEDEILEALNLAQKAILNGSNAYEEAFSKHKKNSQIELKNEIEHPEILAFIENNFQKQ
                     IKEAINQMAKSERASELNKIAKEILNLEIAKDWSEESVLNTLAKVKRKLIREQILNEG
                     KRADGRSLNEVRPISIETNILPNAHGSCLFTRGQTQALVVATLGGENDAQMIDLLTEK
                     NPISERFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSVDENYPYVIRLVS
                     EILESNGSSSMATVCGGSLALKAAGVPSLKLVAGVAMGLIFEDNKHAVLTDIMGLEDH
                     DGDMDFKVAGSKDGVTALQMDIKLGGIDQETLKQALYQAKEGRIHILNIMEEAAKEII
                     VNEEVLPKLELFSVDPSKIVDIIGQAGKTIKEIIEKFGVSIDLDREKGEVKIAGSQNE
                     QIKAAKDYIINITSSQKGTKKGSKDKDISGFELGQEFQGIVKKIAPFGAFVELKNGVD
                     GLLHSSKSKHLNLTENQSLKVKISEIKNGKISVDLCE"
     gene            complement(8127..10175)
                     /locus_tag="RJ336_000068"
     CDS             complement(8127..10175)
                     /locus_tag="RJ336_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HDZ5212553.1"
                     /translation="MWRKFSLLLGTSIALNAAQVDIYALDAKKEGDILTANNDVIIFS
                     DFYFITANKAIYNEKTGDVELFGDVNILRGQNERSHSDYAKINLNSNQADFSNFFFSN
                     NNLEVWFQSKTSHLNDKVFESKISAVSSCNVEDPDWEIRFSKGWLNRETNFVHLYNAR
                     LYVKNTPVFYLPYFGFSADTHRQSGLLIPKIVLKSSEGLYYEQPIYIATQENWDLELD
                     PQIRTNRGFGLYSTLRFLDSPYSTGELNFGAFRENSSYFHDENLKNQTHYGIELKYSR
                     DDLIKSLLSDNFQEGLWIDATYLNDVDYLNLGSRDYRDLNSLVTSKINYFLADENNFY
                     GAYARYYIDTSKLSNNTTLQEYPSFQYHRFLNNLFDERLRYSFDASFHNFYRPAGSYA
                     NELNLDLPISYHNAFFGDFLHFTFTERFYASFVNYSNDPERNHEHYFRNTHDFNLYTD
                     LSKAYENFFHTLNLGVNYILPGAKSGKITQNYLEEYDKENEHTSLYAVQYFYNNEGQK
                     KLKHRISLDYLNKQNKFYELQNLLTYYFNENINLNSEVLYSYEQSRFTNVISQIEVNT
                     NSKFNWMFSHAYQNDEYGKYSFIGTRANYIATPNYNLFGGIWFDTQRAHANMWELGYT
                     YQRKCWNYSLMYRERIDPQLTSGGITAKNQSGVYFIFNFYPLGGVKYDFSLAESENKI
                     "
     gene            complement(10165..10617)
                     /locus_tag="RJ336_000069"
     CDS             complement(10165..10617)
                     /locus_tag="RJ336_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDZ5212554.1"
                     /translation="MKENLQDRLERENLKIASFGKRVLAFLIDDMVISLIVFIIFYDR
                     LIQAKDLFETTQIIGNFYLGFILLHFSYQAIFTYLYGASLGKILCKIIILDENLLDKP
                     NLIQSCIRSAIRQVSAMAFMLGFAWALSNDLRKAWEDYLARTIVVDVA"
     gene            complement(10614..11864)
                     /gene="purD"
                     /locus_tag="RJ336_000070"
     CDS             complement(10614..11864)
                     /gene="purD"
                     /locus_tag="RJ336_000070"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDZ5212555.1"
                     /translation="MKIMILGSGAREYSIALALRRVDKNLEFYFAPGNGATESLGTNL
                     NLKDPVVLATYAKEKGFDLCIVGSESFLAEGVVDIFKQQGLAIFGPSKAAAMLETSKS
                     FMKSFLKKYRIKTAKFLNTNDIEKAKNFIYSLTPPIVVKADGLCAGKGVIIAKTHEEA
                     IEETAKMLSGESFGDAGKLVVIEEFLDGYELSIFAVCDGNDFVLLPAAQDHKKLLDND
                     QGPNTGGMGAYAPSSLANESLLRKVQKDIILPTLAGMKKEGAEFCGVLFIGAMIVGNK
                     PYVLEFNVRFGDPECEVLMPLIEDPLELILAATQRRLRHAKIKIKKEFAVGVVCASEN
                     YPYKSSPKSEITVNNIPENSHISYAGVSLEDGKLMADGGRVLVCVGTGKSIEEAQKNA
                     YKLCDNVNFKGKQYRKDIAHQVLK"
     gene            complement(12104..13564)
                     /locus_tag="RJ336_000071"
     CDS             complement(12104..13564)
                     /locus_tag="RJ336_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212556.1"
                     /translation="MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGML
                     VEFRTLSSEKKAEDGKPVQTSKTITGIKPSKFQEFKEGDFITEHDFWKTDNDDELEDL
                     QNSRRSAYITELYRTTDFDTIEKIPLSFTIPQAIQKYFAHEILSVETLQANLQDEKEI
                     PCILDYLILKRFLFKAYDTLIFMDNSIDQTQFSALKSIMMHLENSYKQMIADQKPNIT
                     KIFNETFLSLQCHYQALVATIDTRNNRLASLEAQMKTLQSEINLKSNAANADPEKLKA
                     RQERLTKLQKEAEYYRTTLKRLDAIREDFYKKNYNIFENAFKLSREKLFKKIVTGLNL
                     CATIMDVKIWHLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKSALNPFDQKL
                     LVYIQKITKEQRKKFLVVTSDLDLLCKLKIENFSQNPYYLVKYAPKKVNYQSLMRDNT
                     FDIVYIDEKHVWENVADIILQGKHFDKSGKTKFKLI"
     gene            complement(13650..15185)
                     /gene="guaA"
                     /locus_tag="RJ336_000072"
     CDS             complement(13650..15185)
                     /gene="guaA"
                     /locus_tag="RJ336_000072"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDZ5212557.1"
                     /translation="MKKADILVLDFGSQYTQLIARRLREQGVYAEILPFNVSLADIKA
                     KEPKGIILSGGPASVYATDAYFCDKGIFDLGLPILGICYGMQLMAHHYKATVAPAGHK
                     EYGKANIEVKKDSALFKNLPKKQTVWMSHSDKVENLPQGFEVLATSENSPFCVFGNED
                     KKFFALQFHPEVQHSEFGKNILKNFAKYACNCESVWNMGSFAKTQAEKIREEVGSDKV
                     LCAVSGGVDSSVVAALLASAIKEQVIVVFVDNGLLRSGEKEQVEFMFKNTLGIDLISI
                     DASEIFLSRLANVRDPEQKRKIIGNTFIEVFEEEAKKHKDVKYLAQGTLYTDIIESSV
                     VGASKTIKSHHNVGGLPEKMNLKLIEPLKEIFKDEVRALGLELGLSKEVVYRHPFPGP
                     GLAIRIMGEVNRPSLELLRKADVILLEELKSTGWYDKTWQAFCVLLNIKSVGVMGDNR
                     TYDNAVCIRVVDASDGMTATFSHLPYEVLENISRRIINEVEGINRVVYDISSKPPATI
                     EWE"
     gene            15324..15818
                     /locus_tag="RJ336_000073"
     CDS             15324..15818
                     /locus_tag="RJ336_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212558.1"
                     /translation="MGKRNNIKMTKNASAVINELMDKPHYKPLKTLFFCKDFLSSFPL
                     AKQRLIAKIYVKNHILNIITLHPAAYQELNHDDSKIYIKFLIKAYGQKYPLSGFVDIK
                     DIKIFSQKYTYAVNKNKNDEKLSKNSYLELSKGEFKNCFEDEKLFKKFEDLRELIKKG
                     SNLD"
     gene            15811..17613
                     /gene="uvrC"
                     /locus_tag="RJ336_000074"
     CDS             15811..17613
                     /gene="uvrC"
                     /locus_tag="RJ336_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDZ5212559.1"
                     /translation="MTKENLENELKTLPNSAGVYQYFNQEGKLLYVGKAKNLKNRVKS
                     YFAFTPNLHANPRNSLRIQKMIEETVHLEFITTNSEADALILENSFIKQLHPKYNILL
                     RDDKTYPYIYVDFEEEFPRFEITRKLVKKSKIKYFGPFFKGARELLDALYLYYPLKQK
                     ASCKSPCIFYQISRCLAPCDKRISREKYLEILDEAMHALLNPSILIKNLEKQMLVLAQ
                     NENYEEAAKVRDQIVTIKDLEVKVEIDIAKLEDFEVFALAFENSMLSTLRFVVQNGKI
                     ISVNSKITPIKNDIQWDKNEIYKQLILENFSMDIPLLANVIYVYEEFEDRMLLEEILS
                     QRFDKKISIKIPKIGEKRRICDLAFQNALLNIEKEQKNHDFTIQKELKSYFELENLPN
                     DIEIFDNSHLQGVANVGAMVTYSANSWDKSKYRKFHLKHKNDYDQMREVLMRRVLDFD
                     KIPPPDLWLIDGGKALLDLAKEIIVSSGANVDILAISKEKIDAKAHRAKGGARDKIHS
                     LKGEFSLSINDKKLQFLQKLRDEAHRFAISFHQNTKKKQDLNSSKLVNLGLSSGVIQK
                     LLAYYGNFESIYKADFKDLAMLVGKKVAQKIKEN"
     gene            17615..18811
                     /locus_tag="RJ336_000075"
     CDS             17615..18811
                     /locus_tag="RJ336_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212560.1"
                     /translation="MILAGIIFIFNLILAYLSIDISKLDSVAEQLKIGMFSSIFVLSL
                     TLFIFAFRQNRNINKIYQKIFYMQNDFLNFQKKIDVDSVLDLLKEKFETTGQNLTKTS
                     HEKDRYLHLLEENLYQLGNISNAMRCLNEGYNKEINSLILNALNSQKDQIRLELNEAL
                     EHHKSIIGTSHGKVLQFEASVAIVNNDELENFLLANLLSYFGIESTCFKNLSFDVNDF
                     HLIFIKDKILNENVKKNYDFIVMGRHKNTHYEYFLTLPFEKKDLENILQNKLDKVCTL
                     KFKTPYQNNVLLFKQNDFDATLFFNIIEKQCDKNVCINSFSQLKQELSKETYRLILLD
                     YELIKFDLEQMRNLLSAYKKQHPQSHIIFFSKEKVGDFDCVSEVLSDVSRNDLITLLR
                     KYLPKA"
     gene            complement(18808..19710)
                     /locus_tag="RJ336_000076"
     CDS             complement(18808..19710)
                     /locus_tag="RJ336_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDZ5212561.1"
                     /translation="MKILFGPVSSRRFGRSLGIDLSPSKKQCNFDCVYCELDPKKAQE
                     KQDEIISIDKIISEVKVVLEKNVEFDFLTLTANGEPSLYPHLNELILSLRSIAKDKKL
                     LILSNGTAVLDEDKFNALLKLDVVKFSLDSAVAKTFYRIDRALKNIDLEKMIEKMADF
                     RARFNGDLIMEILVVKDLNDNEEEFEALNQALKKIMPLRVDLSTIDRPPAYAVKKVSE
                     EKLLELSKLIDSTPVLLAKRHYEGEKLSFNEEELLKMLHLRSQSEIDIEVKFDEQSKT
                     LLNQLIKEKKVKILDLAGVKFYKA"
     gene            complement(19707..20729)
                     /locus_tag="RJ336_000077"
     CDS             complement(19707..20729)
                     /locus_tag="RJ336_000077"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDZ5212562.1"
                     /translation="MIFIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLC
                     KDYKKASEVSLQPIDILDVDAAIIFSDILVVPLEMGMNLRFEKGEGPVFDNPISTLED
                     LEKLDDQNAHKKLNYVYDALKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAK
                     CKKMLYQNPELLHKILNKLTQVLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSF
                     NYMLEISNFIKSKYPNIPVILFPKGISGYLDRIDGNFDVFGVDWSTPLDLARDKLSHK
                     YTLQGNMEPCRLYDKNAIKEGVEKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLV
                     QESSAK"
     gene            complement(20909..21229)
                     /gene="ciaC"
                     /locus_tag="RJ336_000078"
     CDS             complement(20909..21229)
                     /gene="ciaC"
                     /locus_tag="RJ336_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion antigen CiaC"
                     /protein_id="HDZ5212563.1"
                     /translation="MVVDNTQKTSNAIFSTTTKVKEKNTSADEFQATLNEVKNKEEKE
                     EEKTSSSKFTNEDIDLGAVREDFRSYAWQKMREDQYKKNEETLLNKLFATIDAGNATN
                     NTKA"
     gene            complement(21285..22484)
                     /locus_tag="RJ336_000079"
     CDS             complement(21285..22484)
                     /locus_tag="RJ336_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ5212564.1"
                     /translation="MQNYKKALFALALSAFCMGVTEFVMAGVLIDVEAYFSVDAKTAG
                     YLTTLYAIGVVIGAPLITIPLSHFHRHTQLLSNLGIFALANFIIFFSQNFYLTAFARF
                     IAGTQHGVFFVIATLAVSAIVPNDKKSSALAIMVTGLTVALVTGVPLGTFIGHYFGFK
                     FIFLLIFIITSLAFFGVWHMMPKNLHPSPTSLKNLIPAFSHQNLLKTYTITICSCGAQ
                     FVLYTYLQKLLVEISGFKVQDTAYILLLYGICAICGNLWGGKIVDKKGAIFSLRLILS
                     IQVLVFLSVFLTMHSKILIIFSVALIGFFAFSTIPALKMLSIAKAKRHTYKVIDSTVS
                     VNEAAFNVGIALASFLGGIVLAGLGIEFNALFSALFVSPALIFALLFAKDKLNYKKFQ
                     RKSLKKI"
     gene            22598..23200
                     /locus_tag="RJ336_000080"
     CDS             22598..23200
                     /locus_tag="RJ336_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212565.1"
                     /translation="MKKIIFLFGLSLASLEALSFDELIYKDEVKPSFDCSKVKDDGKS
                     DDELMICNEIGVRNEFENKKLALADNIYSSLYQNISKKADKKMKKDFKAISKKMLKER
                     KICIKNMQNTKAGENPILPLLNASDCMQEAYIKALLELMQRAKKDTKTKEVLEQIFKN
                     KVDKYENLLTQSLNTNKDLQDFIDSLAKEDLIDSRAKFKF"
     gene            complement(23190..24284)
                     /gene="pdxA"
                     /locus_tag="RJ336_000081"
     CDS             complement(23190..24284)
                     /gene="pdxA"
                     /locus_tag="RJ336_000081"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HDZ5212566.1"
                     /translation="MKKLAISIGDINGIGLEILVRSHEELSKICTPFYFIHENLLNKA
                     SKLLNLKLFNAKIVAFKDDKDYEFNFIKKENSLEIYSFCLPLGFKVDENFEIKAGEID
                     AKSGLYGFLSFKAASYFVYEKHAHALLTLPIHKKAWEDAGLKYKGHTDALRDFFKKNA
                     IMMLGCKELFVGLFSEHIPLAKVSKKITFKNLSIFLKDFYKETHFKKIGLLGFNPHAG
                     DYGVIGGEEEKIMEKAIAFVNAFLHSKKDEKFFKKALKDENLQKELLLNFKGKGVYLP
                     YPLVADTAFTKAGLKNCNRLVAMYHDLALAPLKALYFDKSINVSLNLPIIRVSVDHGT
                     AFDKAYKNAKINTKSYFEAAKFAINLSLKT"
     gene            complement(24281..25054)
                     /locus_tag="RJ336_000082"
     CDS             complement(24281..25054)
                     /locus_tag="RJ336_000082"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HDZ5212567.1"
                     /translation="MLLGVNIDHIAVLRQARMVNDPDLLEAAFIAAKHGDQITLHVRE
                     DRRHAQDFDLENIIKFCKSPINLECALNDEILNLALKLKPHRVTLVPEKREELTTEGG
                     LCLNHTKLKQSIEKLQNANIEVSLFINPSLEDIEKSKNLKAQFIELHTGHYANLHNAL
                     FSNISHTAFALKELGQDKKNLQAQFEKELQNLKLCAKKGTELGLKVAAGHGLNYKNVK
                     PVVKIKEICELNIGQSIVARSVFTGLQNAILEMKELIKR"
     gene            25110..26084
                     /locus_tag="RJ336_000083"
     CDS             25110..26084
                     /locus_tag="RJ336_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HDZ5212568.1"
                     /translation="MLGIDLGSNTLRAVQMDEKLNKLKEYEFVIGAAKNLNQSGEISK
                     EAIQRLKNALSILAKEQDLSKARAVATAAFRKASNTNEIFAHLKEEFGIDFKLIDAKS
                     EAKISVLGMQSGLRRLKIWGEFAYCDLGGASCELSFRKSFKSFDFGIISFYEKNCHSY
                     YKSCISYKKLIKKYPKFIINIKDKKLKIHFLIANPYLKHLAFMAFDEVAMIKKELRSL
                     GVKTVVLNSGVPTTLSALKQNINYEKYEATRVNGKKLCHKDFLNYAIKLFHMEEKKAI
                     KEVGMMRKNYLSAGCLLFYALFDKHKLLVIDEGLREGVCLASMKNIKF"
     gene            complement(26081..27031)
                     /locus_tag="RJ336_000084"
     CDS             complement(26081..27031)
                     /locus_tag="RJ336_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDZ5212569.1"
                     /translation="MKFSDFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFSTLLAK
                     HFLNLIDKKILQPPLELVEIGANEGYLSRDFLAALLELRPEIFSQISFFVIEPHEKLK
                     NLQKKTLEGVEFTHKNSLKECHFKNAFFFCNELFDSFTCELIDHDKMAFVENFKLIFK
                     NMDENLITKCKALNLTKGELSLELENFFKDLDQACERFIFAGFDYGTLNPQNFSLRIY
                     QKHEVFSPFEVSLKDFFGKSDLTYNVNFTHLQKLIKEYDFKPLAFKKQSLALMDFGFE
                     DLLEYTKNKNIKTYESFLSQAKILFFNFDEKFHFFEFQKN"
     gene            complement(27028..27849)
                     /locus_tag="RJ336_000085"
     CDS             complement(27028..27849)
                     /locus_tag="RJ336_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDZ5212570.1"
                     /translation="MKALWILLSLTLWLFGAQNLELIKGQALFLELDKKNFLSLKNND
                     KNIPTFAHPKNQEKILAIFSLPYKNPPQNTKLIAFYKDKKEEIFIKTLEGNYKSEKLQ
                     VENKKIFPPKTVQERIAKELKEANAIYSSYTPKALFNGAFNIPLNSFITSDFGKARTF
                     NEKVASYHSGTDFRAATGTPIYAANSGIVKIAKDRYFAGNSVVIDHGFGIYSQYYHLS
                     KINVKVGQKIKKGELIGLSGASGRVSGPHLHFGILAGGKQVDPLDFVSKFNAIFQ"
     gene            complement(27846..29840)
                     /locus_tag="RJ336_000086"
     CDS             complement(27846..29840)
                     /locus_tag="RJ336_000086"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDZ5212571.1"
                     /translation="MSELLIEIGTEELPAIPLLKELANIEKKWKNVLEEYRLVNDFKF
                     YYTPRRLVFFHENFAEKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGISENELT
                     FKEIKGKEVLYHQKAIKGLQSQEILGEMIEKFLKSLSFGKSMRWGANSFEFIRAIRSI
                     ACILNDELVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPNKRK
                     EKILEQFKLIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPGEVIITSM
                     RENQRYFAVFNDKGLSNHFIVVSNAVCKDYSKIIHGNERVLRARLSDAMFFYQNDLQN
                     GLKPEKLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENISTALKYAKADLAT
                     QMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEFSSIVALANK
                     LDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLSSHYKSFD
                     MQILKDFIFERLYTFYTVNASFVKAVLSSQNTDLIHINQSVNALIELSKKDNFNENFA
                     TFKRLANIATKNPHKVDESLFVQEAESKLYKAFQEKTKANSLQEKLENLFALKPFIDE
                     FFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKELSL"
     gene            complement(29896..30516)
                     /locus_tag="RJ336_000087"
     CDS             complement(29896..30516)
                     /locus_tag="RJ336_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDZ5212572.1"
                     /translation="MINVFFDMDGTLIDSANAISCTVNEIRQDLNLAPLSREIIMQTI
                     NTPNIDWAKELYNIENFHHSSFKEGYEKYFVKHYEQSVVLFEGVKELLEFLKSKNCFL
                     AIATNAPQSSLSNILKKHQIIPYFDKILGVNLGIEPKPHPMMLELLKSEAPYKTSVFI
                     GDSQKDKECAKNANLPYFHAKWYQKDLKENEFSNASELKGFLEKYL"
     gene            complement(30513..30845)
                     /locus_tag="RJ336_000088"
     CDS             complement(30513..30845)
                     /locus_tag="RJ336_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212573.1"
                     /translation="MTKNEEKALRVKYLRNLEKFFNGAISALKKEDFDKTKFEERMLK
                     NAKFFEKNPAVNLNSTYAKNLEFFVNACLDFSKEKSELLNLANALDKQKKQGEKKEKH
                     KNYLKDYE"
     gene            complement(30855..32480)
                     /locus_tag="RJ336_000089"
     CDS             complement(30855..32480)
                     /locus_tag="RJ336_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDZ5212574.1"
                     /translation="MDNFLEIFLITVAIAIVLNVIFKKFEIPTIIGYIAAGEIISEIY
                     HLSGKGEITHIAEFGIVFLMFTIGLEFSFKHLMAMKQEVFLNGSLQMLTCGFVFMLLA
                     IGILGLGDKSATIVGFALALSSTAVVLKILNDNGDINEQYGRKALGILLFQDIAVIPL
                     LLLVDIFSSNNQNIEKLLFTTLISALILITLLFFIGKYLVDRIFRLIIHTSSQEIFIS
                     TVLFMVIGASFLANYFGFSYSLGAFIAGALIAETKYKHKIEADLIPFRDLLLGLFFIT
                     VGMQIQLDVVAQNWFLIIVLTLLVMALKFGIVFGFLFLYTKKRVALKTAFAIAQIGEF
                     ALAIFSLLQAKNMLDIKTSQILIVVSILTMIITPFILNNIRKITNVVEDIALNTNAVQ
                     NIDSNIKLKNHLVVFGYGRLGQEVVQKIKNTGVPYLVLESDLNLVELGVSRGENVVFA
                     NAAQEETLKIANIEECAVAIITVTNEAKLEILCQVLANYPKPIDTIIHVNGTLKKMLF
                     SSIDENIRIIRSEKVIARNLVQEALECRIHKNT"
     gene            complement(32487..32861)
                     /gene="hspR"
                     /locus_tag="RJ336_000090"
     CDS             complement(32487..32861)
                     /gene="hspR"
                     /locus_tag="RJ336_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock transcriptional regulator HspR"
                     /protein_id="HDZ5212575.1"
                     /translation="MEHHYDEPVYLISVVAKVLSIHPQTLRQYEREGLIEPSRTDGKI
                     RLYSQRDIDRIKLILRLTRDMGINLAGVDVILKLKNQLHEFENLIDELRLELSKQQDK
                     EAASKAVVKHKNSFDLIFYEKK"
     gene            complement(32877..33770)
                     /locus_tag="RJ336_000091"
     CDS             complement(32877..33770)
                     /locus_tag="RJ336_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family protein"
                     /protein_id="HDZ5212576.1"
                     /translation="MNSLYETLGVSKNASADEIKKAYRRLARKYHPDINKEKGAEEKF
                     KEINAAYEILSDEKKRAQYDQYGDSMFGGQSFHDFSRNAGGVNLDDILKDLFGGGFGG
                     RSRGGFNGFSSKGFSSGFGGFGGFEEENLDSNLELHIPFEKAVKGGEHSFNFQGETIK
                     FKIPHGIKEGEKLRIRSKGKQSRNGARGDLIIIVKIEESPIYTREDDDLYQKVDISLK
                     TALFGGKINIKTLKEGKEEATINITPNSKNNQKIRLKGYGVQNRKSDIYGDMYLILNV
                     VLPNLDTLDEKFIELLKEKLP"
     gene            33970..35388
                     /gene="htrA"
                     /locus_tag="RJ336_000092"
     CDS             33970..35388
                     /gene="htrA"
                     /locus_tag="RJ336_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease HtrA"
                     /protein_id="HDZ5212577.1"
                     /translation="MKKIFLSLSLASALFAASINFNESTTTANRVNPAAGNAVLSYHD
                     SIKDAKKSVVNISTSKTITRANRPSPLDDFFNDPYFKQFFDFDFPQRKGKNDKEVVSS
                     LGSGVIISKDGYIVTNNHVVDDADTITVNLPGSDTEYKAKLIGKDPKTDLAVIKIEAN
                     NLSAITFTNSDDLMEGDVVFALGNPFGVGFSVTSGIISALNKDNIGLNQYENFIQTDA
                     SINPGNSGGALVDSRGYLVGINSAILSRGGGNNGIGFAIPSNMVKDIAKKLIEKGKID
                     RGFLGVTISALQGDTKKAYKNQEGALITDVQKGSSADEAGLKRGDLVAKVNDKIIKSP
                     IDLKNYIGTLEIGQKISLSYERDGENKQASFILKGEKENPKGAQSDLIDGLSLRNLDP
                     RLKDRLQIPKDVNGVLVDSVKEKSKGKNSGFQEGDIIIGVGQSEIKNLKDLEQALKQV
                     NKKEFTKVWVYRNGFATLLVLK"
     gene            35464..36138
                     /locus_tag="RJ336_000093"
     CDS             35464..36138
                     /locus_tag="RJ336_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDZ5212578.1"
                     /translation="MTNILMIEDDLELAEITAEYLEKFDMKVDIAHEPYIGLSKLALK
                     EYQLIILDLSLPGLDGLEVCEEIRKKYDTPIIISSARHDITDKVNALELGADDYLPKP
                     YNPKELQARIKSHLRRISNTKSAIAKSVKDLVYDQYKHIITMKGQELTLTNAEFDILS
                     YLIKKEGGVVSREELVYNCSSISEDSSNKSIDVIISRIRQKMGDDPKTPKYIHSIRGI
                     GYKLTQ"
     gene            36135..37382
                     /locus_tag="RJ336_000094"
     CDS             36135..37382
                     /locus_tag="RJ336_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDZ5212579.1"
                     /translation="MNKSSIFYTITFIFIFAGVSVILGFLWLIEYDQQNYTRELNTKY
                     SLIANARLLNFAGVISEKEFEEQTKNYNKMDEITEAKQIRKILFRGDVLARVEVNNGL
                     IEIISYNRQVYLNIIYDGKVYLYKDQDYQTYRYFIIKAIAVAVICILVLLYIYIFKKL
                     KPLKRLKKQIDKFAQGKLNDIEDVSTGVDEISQVSEAFYQAIVQIRKLNQSRQFFLRN
                     IMHELKTPITKGLLTLEMIEDNKYKERLNGVFTRLEILINEFAAIEQITSGAAFINRK
                     KYNILDVLDEAKEIAMRDDSNIRIFMEESFFVNVDFKLFTTAIKNMIDNGIKHSEDGF
                     VQIDIIDDYICFKNRGPELNNTLEYYTQAFTQGSKQKSSFGLGLYIVNTILETHGMKL
                     DYLYEDGVNLFYFRNLKSVIVKE"
     gene            37475..37549
                     /locus_tag="RJ336_000095"
     tRNA            37475..37549
                     /locus_tag="RJ336_000095"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:37507..37509,aa:Asn,seq:gtt)
     gene            complement(37639..38010)
                     /locus_tag="RJ336_000096"
     CDS             complement(37639..38010)
                     /locus_tag="RJ336_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HDZ5212580.1"
                     /translation="MKRNVKTYSFRMPLELKERLDNLSKNLSKPKSAIVKEAIEAYLN
                     EVEDFSFAVNALEELKDGDYQKASKKIDKIVKNLQEDSNDNELGDFDFAIEALEELKD
                     GDYQKASKKIDKIVKNLKQTK"
     gene            complement(38021..38620)
                     /locus_tag="RJ336_000097"
     CDS             complement(38021..38620)
                     /locus_tag="RJ336_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HDZ5212581.1"
                     /translation="MLPKWDNSYSVHNAKIDEQHKKLFELAAKVEVVSDRSVSKNEVK
                     ELLAEFFNYMKDHFNDEEKYMQLIGYPNLEEHRKIHKEIIQTMINLIKDIKSTNDLKE
                     KLYIVAKKWLLEHILYEDMKVEKWRSSSLSTDDGGDVSFEAAEDEDNEHPQFYLYTCN
                     CPGKIHDVPYSIHQKIELQGHKFTCKTCKQAIKFYKKHS"
     gene            38768..39433
                     /gene="dccR"
                     /locus_tag="RJ336_000098"
     CDS             38768..39433
                     /gene="dccR"
                     /locus_tag="RJ336_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DccR"
                     /protein_id="HDZ5212582.1"
                     /translation="MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAYE
                     RYFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFMTSLNTTNDLKQGFDAGCDDYIK
                     KPFELAELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIK
                     LLSLLLKNKNNFLSTERIFEELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGY
                     CYG"
     gene            39426..40616
                     /gene="dccS"
                     /locus_tag="RJ336_000099"
     CDS             39426..40616
                     /gene="dccS"
                     /locus_tag="RJ336_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DccS"
                     /protein_id="HDZ5212583.1"
                     /translation="MAKKVIRQILLIYLTTTGIFLTIFFALWYQKLYEELVVLKGATL
                     RENHRNIVISILNSRFTPIDISAKNIAQSTALKFAIFDAKKIVFSNIDFDLRKAKIEL
                     KGRGICDNKVFFLAPMSADHYFLRHASNEEVNTNDGLQILIQGEDVSKDLFWIRTKVF
                     GFAIMAFCILGLISYILVKIALKPLEDKISTLNRFIKDSTHELNTPLSVILMSIEQLE
                     HQNLGDNAKFTRIKLAAKSLSQVYSDLVFYNFPNTLETEKQKFDLRILLEERLEYFKV
                     FFEQKKITLKLDLNQANIFAPKSQISKLIDNLISNAIKYNKKGGVISIILKANFLSIA
                     DTGCGISKSNLNHIFDRYTRFNTDQGGFGIGLSLVKKVCDDNDIKIICESVENQGSVF
                     KLNW"
     gene            complement(40659..42296)
                     /gene="groL"
                     /locus_tag="RJ336_000100"
     CDS             complement(40659..42296)
                     /gene="groL"
                     /locus_tag="RJ336_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344612.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDZ5212584.1"
                     /translation="MAKEIIFSDEARNKLYEGVKKLNDAVKVTMGPRGRNVLIQKSFG
                     APSITKDGVSVAKEVELKDSLENMGASLVREVASKTADQAGDGTTTATVLAHAIFKEG
                     LRNITAGANPIEVKRGMDKACEAIVAELKKLSREVKDKKEIAQVATISANSDEKIGNL
                     IADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKMTVELSSPY
                     ILLFDKKIANLKDLLPVLEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVK
                     APGFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNG
                     AGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKK
                     DRVDDALSATKAAVEEGIVIGGGAALIKAKAKIKLDLQGDEAIGAAIVERALRAPLRQ
                     IAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSV
                     ASMLLTTEATISEIKEDKPAMPDMSGMGGMGGMGGMM"
     gene            complement(42317..42577)
                     /gene="groES"
                     /locus_tag="RJ336_000101"
     CDS             complement(42317..42577)
                     /gene="groES"
                     /locus_tag="RJ336_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDZ5212585.1"
                     /translation="MNFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVS
                     KEITDIANGDKIVFAKYGGTEIKLDNNEYLVLNLDDILGILK"
     gene            42739..45279
                     /locus_tag="RJ336_000102"
     CDS             42739..45279
                     /locus_tag="RJ336_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212586.1"
                     /translation="MKKIFYGVIAFVVVLLIAIYTILFTSFGNNIVANIAQKKIKESA
                     GLDVNITHFNLRFSSLELQANIANMADFNLKGALSPFKLGFDLDYLISLNQNYAKNLG
                     LNLNQNLSFVGKIQGKASDFTLDGKGYLLGSNVLLNARMYNYSPIALNLDAQNLKIEE
                     ILHLLSYPSYAKGFLNAQAKISAQNLKPDGNIIIKLDTNYINYEAIKKDFSLDLPLNS
                     NPKAEILANVKEDKIYAVSKIYNDYLNLQTQKTLYDISKNALSTDFNLSIPSLVKLET
                     LTKTRLNGNLGVIGQTSVVNNALSSLNAQVIGLGGEVKASLKNNKIFADINEASLEKL
                     LALAGYGALVSGNLNAKLLNADLDFSNFDLEAKINNAKLNTNELKKIAKIELPNTIFS
                     FDAKANAKNSNIAYNALLASNLLNIKKLQGSYNLKNSELNTDLNAFIDDLSQFSAIAG
                     QKLQGKADLAAKAHIIGTQIQNLNANANLADGVIKADSNGKKLDLNIDKLDLSKLFVI
                     AGMPNYASGIVNAKINLDNIDFNNLNGKANLEAKGILNATTLSKILNKNFPNNTSYDL
                     NTKINFKNNIAQFDSVLNSSLADLTKLQGSFDISKMLLNSDFNLKINDFSKLGFLLDR
                     KLKGKAEFNGKVGFDKSLNFVVNSPNLFEGRLQSTLKDNLLLADLNGVDLSSLAQGLD
                     FMDVYQGKADVKANYNLLSEEGEVNLDMKEGKLKPNLITNALKILTLKDITNDVYRTA
                     NAKALIKKENIKLDLNMQADRSYILVQSGALNSKSGALNLPFDIKLDRANFKGSITGT
                     TENPKVNLNAGSVLNSIKNVVGGGVSDGAKSTGDKVDKAVNKLLNKIF"
     gene            45288..45899
                     /locus_tag="RJ336_000103"
     CDS             45288..45899
                     /locus_tag="RJ336_000103"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDZ5212587.1"
                     /translation="MFNGLIREIAKVQSYQNNTLSLKAKYRPNLGDSIAVNGACLSVT
                     KLYEGGFEVELSRESRTHIAIENLKDKVHIEPALRYGDRIDGHLMQGHIDFIGTLEKI
                     QKDENGVDFYISLPKEAMKFMAEKGSIAVDGVSLTINEILKNGIRLTIIPITFKETLF
                     KDYQVGRKINIESDLLARYIYAQLQGKNKGLSWEEVERISYLY"
     gene            45863..46543
                     /locus_tag="RJ336_000104"
     CDS             45863..46543
                     /locus_tag="RJ336_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HDZ5212588.1"
                     /translation="MGRSRKNFLSLLENDKVVIFCAFDKDYNVFRAKVYSENLFYHLG
                     FKDIKKCVFMDQIHSHKVIIYEKNLKNLSCDGLISKEKNIALCVLSADCLPLILYHES
                     GIIAALHSGRKGSFENILKECVDQITMQNSHLDKNKFHLFILPGICAKNYEIDGEILE
                     FAKKEFKEFVQDDKLDLKALVKFQAQNLGIENIKDCGICSFDDESFFSYRRDKTPKRF
                     VSVVYLKD"
     gene            46545..46748
                     /locus_tag="RJ336_000105"
     CDS             46545..46748
                     /locus_tag="RJ336_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212589.1"
                     /translation="MYERKDLRVLKIIQKAREFGDGDLLNEALVKQLIDADFCEINEK
                     EKEELATLLNSLINAKDKALLSN"
     gene            complement(46745..47905)
                     /locus_tag="RJ336_000106"
     CDS             complement(46745..47905)
                     /locus_tag="RJ336_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDZ5212590.1"
                     /translation="MKKLLLLFIFVVQSFAALSVEELTWDNGDTLLKFLQRNSIPMSL
                     YYGLDREDQELASDIAYKIKYQVLKDENNNIEQVLIPISDDLQIHIYKDKDGQYTLAF
                     TPVSYQKEDRILHLTIKSSAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDEVTL
                     YYEQKRRMGKLWGDINIKMAMVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYT
                     RISSPFTTARYHPILKRYRAHLGIDYAAPTGTPVKSAGKGVVTFIGTKGGYGNVIQIK
                     HDSGYMTLYAHLSRFAKIKNGQKVNQGQVIAYVGSTGMSTGPHLHFGVYLNNKAINPA
                     SVVKIAKSELSGKAKENFKHIIAGYEQVVKEALASNQPNPPKEEDFENYIEF"
     gene            48027..48752
                     /locus_tag="RJ336_000107"
     CDS             48027..48752
                     /locus_tag="RJ336_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasminogen-binding N-terminal domain-containing
                     protein"
                     /protein_id="HDZ5212591.1"
                     /translation="MFKTIVCFLALNLSLFAVGFDLKPIKSELVKVDDIYGYIKDSDD
                     IKLYSSGVVVQHFSNSQSIIARASVIDKKNGLAKLEFSVFSALKQDALPLPNVLPKVG
                     DEVVLNFLYDRGLVIAPDEQTYNELVREFPQIYFTHIDIFGAQLIRTATLSPKRSDFR
                     QFCDDNAVGILVVALENQAEVVDCQDFNKLYEVPISKPTSVQVPFYSRIGGYKSNFFD
                     FNSQEIGNYYRYYDALINLPKVQ"
     gene            48755..50137
                     /locus_tag="RJ336_000108"
     CDS             48755..50137
                     /locus_tag="RJ336_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDZ5212592.1"
                     /translation="MKKEFEQYFKRFLGEENAYFDEIHKRAYSYDATKKHYLPDGVLF
                     PRNEEDIAQILKFCNENNIIVIPRGSGSGFTGGALAVNGGVVLAFEKHMNKILEIDLE
                     NLVAVVQPGVINIHLQKEVAKYGLFYPPDPASMEYSSLGGNVSENAGGMRAAKYGITK
                     DYVMALRAVLSSGEIIRAGKRTIKDVAGYNLAGILIASEGSLAVLSELTLKLIPLPKF
                     KKTAFAIFPSVKSAMNAVYKSLASGVNPVSMEFLDNLSIRAVESKFNKGLPIEAGAIL
                     IADVDGNVREAIDEDLRNLEHYFLEAGASEFKIAKDEQETADIWFARRNCSQSIAMYG
                     TLKLNEDITVPRSKLPALLEGIDEISKKYGFKIPCFGHTGDGNVHTNVMVPDKNDKEQ
                     VKKGYEAVEEIFKLTVKLGGTLSGEHGIGLSKAPFMNLAFSEAEMNLMRNIKKAFDPN
                     NILNPFKMGL"
     gene            50141..50947
                     /locus_tag="RJ336_000109"
     CDS             50141..50947
                     /locus_tag="RJ336_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HDZ5212593.1"
                     /translation="MKNFFTILLNLRDKEILNYAAALSFYTVLSLIPILFVCFSVFTQ
                     ISSFKAYYEKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFS
                     GYDFVINRITKNEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNF
                     FEILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGAIWYIGKNLFVYYVVYNKTYA
                     SVYGSFSTILFFFIWIYISWIIYLFGLKLYYFLNYNHNEGNKIRKNTKKS"
     gene            complement(50891..>51025)
                     /locus_tag="RJ336_000110"
     CDS             complement(50891..>51025)
                     /locus_tag="RJ336_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HDZ5212594.1"
                     /translation="GTNIYIPFWIFISYLIASLISVRFKYLAFLCIFANFIPFIMIVI
                     "
BASE COUNT        16921 a         7470 c         8228 g        18406 t
ORIGIN      
        1 tttaaaggaa taatgtggaa ataagttatt atgaaattct tgaaatcacg caaaatgctg
       61 ataaagaaac cataaaaaaa gcctatagaa aaatggcttt aaaatatcat cctgatagaa
      121 accaaggtga taaagaagca gaagataaat tcaagcttgt taatgaagcc tatgaagttt
      181 taagcaatga tgaaaagcga gctatttatg atagatacgg aaaagatgct ttaaaaggcg
      241 gtggatttgg ttctagtagc tcaggttttg gtggttttga ggatttagga gatatatttt
      301 ctagtttttt tggagaaggc tttggctcat cgcgtcgtag aaaaagttca aatgatgaga
      361 aaatcccttc agattttatc gttaatttaa aattaagttt taaagaagcg gtttttggtt
      421 gtaagaaaaa tatagacttt acttataaat gctcttgtaa aacttgtaat ggaacagggg
      481 ctaaagatgg aaagcttcaa acttgtccaa agtgtcaagg tagaggacag gttggggttt
      541 ctcaaggttt tattactttt gcacaaactt gccctgattg tcaaggaagt ggagaaaaag
      601 ctagtgaaaa atgtagcgat tgcaaaggtt tgggttataa tgaaagcaaa gatagtgtag
      661 agcttaatat cccagaaggt gtagatacag gtatgaaact tcgtgtcaat gctaaaggaa
      721 atatcccaaa aaatggcact agaggggata tgtatgttaa gatcattgct gctgaagatg
      781 atacttttat cagagatgat gatgatatat atatagaatt tccagtattt tttactcaag
      841 ctatcttagg agagagtata aaagtaccta ccatacgcgg tgaggcgact ttaaatttac
      901 caaagggcgc taaagacgga caaagatttg ttcttgaaaa agaaggggta aaagatgttc
      961 atagttctcg cataggaaat caaatcgttc aaatttctat caaattccca acttctttaa
     1021 acgatgaaca aaaagaactt ttagaaaaac taagtgaaag ttttggtatc aaagatggta
     1081 tgcatcaaga gcaaaaaggg ctttttgaaa aaatcgctaa ttggtttaag tcttaatttt
     1141 cctaaagctt tttagcttgg gaaaattttt ttatataaat ttaagtttta aaaatcaggc
     1201 ataaaaaaag acggagtaaa accccgcctt gaagttagac ttgaaaactt cttagaattt
     1261 gtaaagagct tgaagtctta cagtgctatg atcagcactt tctttagtgt ttacaccttc
     1321 atctaggttc acataagaat agaatgctga gaagttaagt tttggagagt atttgtaatc
     1381 tactcttgca acagcttcaa gttttttacc accacctaaa tgattagcag cttctgtttt
     1441 tgttccaccg tatacgaagt cagcaccaac gcgaactgtt tcgttgaaag tatatccacc
     1501 agttacataa ccaaaaatat ttctaccagt gtcgccattt agtcttgaac cagtagtata
     1561 gaaaatttcc tcacctgcaa gtaaagaacc aatattgcct tgatcttcga ttacaactgt
     1621 agaagctttt tctttatcac cgtagtataa accaccaaga ctagcatccc aaccatttaa
     1681 ttcaacacta cctcttaaag caaataagtt accattagtg tgtgttttat catcaagttc
     1741 gctatcaatg ctatttccta agtaagcacc ttcaagtgtc cagttgattc catcaaagat
     1801 ggtagtgcta taagctgcat ctacagcata aaagaatgct acttgatccc aataagctaa
     1861 ccataattgt gggttgaatt gtccgcctaa gaattcataa gaacctacag cagcaccacc
     1921 ataaagattt ccaattgaat ctaatttaaa aggagctata ttaggtttag cagatgatat
     1981 attactatgt cctaataaat ccgcaccttg ttccgcagcc ataaagctat ctacagcaaa
     2041 agcagctaga gttaaaccat cgatgctatt atttattact ttaacacctg ttccaactaa
     2101 accatcgata ccattgtctg tccagatagt gtttagttgt tgtttaccag cgattacgct
     2161 tgtagcaaca tcttcatttg tataagttaa gtataattga cgaacaaaaa gtcctttttg
     2221 atcatttttt atttcattag caccataacc accatcagca gcattatagt caaattgaac
     2281 aaaagctttg aagttatcag ctatagcagc actgaagtta acttgcgctc tatatttgtg
     2341 atcttgtttg ctgttgttta aatttgagtt gttaatgaaa tttttatcaa aattacctgt
     2401 atcgtatctg tatcttaata cacctgatac atcaacatct ttaatcgctt cttcaagtgg
     2461 agtagcgtta gctgctgaaa aagcacctgc agcaagagct gcaactaaac taagtttaac
     2521 tagtttcatg agaattctcc ttgtcaaaat taataaaaca tcataattgt agcacataaa
     2581 tttggagttt tttcttaaga agcacttaaa atagtaaaaa ttttaaatct gtaaggataa
     2641 aaacatctaa agaaaagcct agctaaaggg atttaagcta ggcgtgtaat tttaaggagt
     2701 ttttcttatg aatgtttttc ggttcattta aaagtataag tctaaaaagt aaacaagaag
     2761 taatatatag ttgctttaaa ttattttgat aaaaaaacaa gtaaattttt acaagccagg
     2821 gataaaattt tataagtttc attaaaattt ccgctatacc aaggatcggg cacttcatca
     2881 tagtttagag tagggctaaa atcagtgatt tttaaaactt tgttttgagt gttggtgaag
     2941 ttttttaaaa catttttgaa gttagaatta tccatggtga ttaaaaaatc gctttcatca
     3001 caaagttttt gagtgagttt tttgcttgtg aagtttttgt gttctatgtt aagttgagca
     3061 agcttgtttt tggtgccatg gtgcatacct tctccatcgt gttttcctga agttccagca
     3121 ctgcttataa aaaattcttt ttctaaattt gcttttttga caagatcttt catgataaat
     3181 tctgccatag gcgaacggca tatattgcct aagcatataa agagtatttt tttcattttt
     3241 atccttgagt tttaattaaa aattataaaa aatatcatac aataaatcca tggaaaattt
     3301 caatagaact ttgcttgtgt gttggtttgg tgtttttacc acaagtatgg ggcttagtca
     3361 aatcgctccg attttgcctt tttatatcaa agaactagga catgttgata cgagtgaaat
     3421 agcgttttac tcagggcttg cttttgggat cactccactt tttatggctg ttttttcacc
     3481 tttgtgggct tttttgggtg caaagtatgg ttataaaaat atgcttcttc gtgcaagttt
     3541 tgggatgtcg gttttaactt tatggcttag ctttgctcat agtgctttag aagtagtttt
     3601 tgtgcggggt ttaacaggga taatttcggg ttttacttct gctgctgttg tgtttatcgc
     3661 tgtgatagca cctaaagaaa aagtcgctta tgctttagga actctttcta cggcttctat
     3721 aagtggaagt ttgcttggac ctttgtttgg tggctttgtg gctgaatttt ttagcattag
     3781 tgcggttttt gatgtggtgg cttttttgat cgcttgttct tttgtgacga tttatttttt
     3841 catccatgag agaaaaattc aaaaagaggc gaagaaaaat actcaaaaag taaaagaaaa
     3901 taaaaccctt atcatcgttc tttttatcac tacttttgtg atacaatttg gtacttttgg
     3961 agtgatgccg attttaagta tttatgttga gcaaattcat caaggtggaa atttggctct
     4021 ttgggcgggt atagtggtag ctgcaagtgg gattagtaat ctttttttcg caccaaaact
     4081 tggaaaaatt gctgataaga tagggcctag taagattatt ttgatagctt tgatattttg
     4141 tggaatttgc ttttacttgc aggctgtagc aagtaatgtt tatacgctta ttttcgtgcg
     4201 tttgtttata ggtgtaggac ttggagggct tttgccttgt gtgaatgcct tgcttaaaaa
     4261 aagtgtgagt gctaaaaatt taagtgtgat ttttggtttt aatcaaactt gtcaattttt
     4321 gggaaatttt tgcggtgctt ttggcggagg gcttatggct tcgcatttta gcgtggaatt
     4381 tgtttttgct tttgtgtgtt tgatttttat cattaatgct tttatttttt tagcgtttga
     4441 gaaaaaatat atcttttcaa atcaaggctt ataaatttag aaaggtttaa aatggaaatg
     4501 attttatttg ctttagtgat gattttgctt gtgtttttat ttatagtact ttttaggcaa
     4561 tataaaagct ctaaaataga agaaaaaagc acgcaaagct ttagcgatat catgcagctt
     4621 aaatccatag gagagttaag tgtttttcaa gtttttagta aagagattgt cactaaaaaa
     4681 gatagtgctt ttaatggaat ttggaaaaat cttttaggat ggtctttgag tgaaagacag
     4741 attgctttga tttttgaatt tgagatcact tttttgtatg atttaagaga taaaaacttt
     4801 gatattttgc ctttagggga cgatacttat aagatcatca tgccagagtg tagatataaa
     4861 cacagcatca tagatatgaa attttatgat gaaaaaaatg ctaaattttt acctttttta
     4921 ctgcctgatt ctatcaatag tacggggatt agttttagcg aaagtgataa aaacaaactc
     4981 ataaaagaag ctaaagatga ggttaaagac ttgtctttaa atcttatcca aaatttggaa
     5041 agcaaaattc ataaaagcgc taaggatact ttagaagcta ttgctaaagg ttttggggct
     5101 aagagagtgg aatttgaatt taaggataat acgcaaaagc tagatgtaaa ctagcttttt
     5161 tcttgtcttg cttgggtaat gctttttcca cctagtccgt aattatctgt atcgatttca
     5221 tcgataatta ctacagtgga gcttttattt ttgtttaaaa ccttagcaag taaatccgtt
     5281 actcctggcg ataagctctt gtttttgttc tgttgtaggt tctccgtttt ctttggtgat
     5341 gtgtatattt acaaaaggca tttttaactc cttaaatttt tataattatt ctaaaatcta
     5401 aaaaattaaa atattctttt attttgtaaa ttttttgatt atttcatagt tttgtaaaag
     5461 ctgttcaaaa gaaaaattta aatttgcggg agaagttgag gggagggcta tggcttctaa
     5521 gcgagggtgg aatttaacaa aaaatttata agcgctttgt cctgtagtaa aaatggcttg
     5581 gattttggct tgagaaagga tcaggcttaa atcattggct tttgcataac ttatagtttt
     5641 atcatctgaa ttttttatct tgcaactttg aagtacatcc caaagagcga tatgtttttt
     5701 tcttaaaaag gcttgttgtt ctgtgatatt ttctaatttt acatcaaaaa gtgtttctag
     5761 tatgggccaa aaacgatttc ttgagtgttg ataataaaag ccatcttgtc ttgattttac
     5821 tgaaggaaaa gatcctaaaa ttaagatttt agaatctttg tcaaaaaaag gctcaaaagg
     5881 atgagttaga aatttactca ctcacacaaa tccacagaaa tttttccgtt tttaatttcg
     5941 ctaattttaa cttttaagct ttggttttca gttaaattaa gatgcttgct ttttgagcta
     6001 tgcaataaac catcaacacc atttttaagt tccacaaagg ctccaaaagg agcgattttt
     6061 ttaacaatac cttgaaattc ttgcccaagt tcaaagcctg atatatcttt gtctttagag
     6121 ccttttttag ttcctttttg agagcttgtg atgtttatga tgtagtcttt tgcggctttg
     6181 atttgctcgt tttgactacc tgctattttt acttcacctt tttcgcgatc taagtctata
     6241 gaaacgccaa atttttctat gatttctttg atggtttttc cagcttgtcc tatgatatca
     6301 acgatttttg aaggatcaac gctaaaaagc tcaagtttag gtaaaacttc ttcattgact
     6361 atgatttctt ttgcagcttc ttccatgata tttaggatgt gaattcttcc ttctttggct
     6421 tgatataaag cttgttttag tgtttcttga tcgattccgc ctagttttat atccatttga
     6481 agagcagtaa cgccgtcttt gctaccagct actttaaaat ccatatcccc atcatgatct
     6541 tcaagtccca tgatatctgt taaaacagca tgcttgttat cttcaaagat aagccccatg
     6601 gctactcctg caacaagttt taagcttggc actcctgctg cttttaaggc taaagatccg
     6661 ccacaaaccg ttgccataga acttgagcca ttgctttcta aaatttcact gactaagcgg
     6721 attacataag gatagttttc atccacgctt ggataaagtg ctcttttggc taaatttcca
     6781 tgtcctagtt ctcttcttcc tggagctttg ataggacttg cttcgcctac tgaaaaacct
     6841 ggaaaattat aatttaccat aaagcgttcg cttataggat ttttttctgt aagcaagtct
     6901 atcatttgag catcgttttc tccgcctaag gttgcaacaa ctagagcttg agtttgtcca
     6961 cgagtgaaaa gacaagagcc atgagcgttt ggcaagatat tggtttctat actgatagga
     7021 cgaacctcgt ttaaacttct accatcagct cttttgcctt catttaaaat ttgctcacga
     7081 ataagtttgc gtttgacttt agctaaggta tttaagacac tttcttcgct ccagtcttta
     7141 gcgatttcaa gatttaaaat ttctttagcg attttattta attcgctcgc tctttcgctt
     7201 tttgccattt gattgatggc ttctttgatt tgtttttgga aattattttc tataaaagct
     7261 aaaatttcag gatgttcaat ctcatttttt agttcgattt gagaattttt tttgtgtttg
     7321 ctaaaggctt cttcataagc atttgaacca tttaatatag ctttttgagc taaatttaga
     7381 gcttctaaaa tttcatcttc actaagttca ttcatatttt gtgaagtggt ttgagttaaa
     7441 acatcagcat aaggagcttc gataaagatt tcattttctt tttgatcagg taaggctctc
     7501 atttctatca tcaaaagctc atcttttaca cctgctacat agagatctag ggtgctattt
     7561 tgaagttcct cattgtttgg attgagtatg aaatttccat ctatctttcc tatacgcaca
     7621 ccacatactg gagctttcat aggtatatca ctaagataaa gtgccacact tgcggcattt
     7681 aagctcatta cttgcaaatc tactttagga tcagctgaga gaaccatcac aacgatttga
     7741 gtcggataag tatagccttt tggaaaaaga gggcgtaagc ttctatcaat aatgcgcgct
     7801 gttaaggttt ctgcatcgct tggcttggtt tctcttttga cataaccacc agggattttt
     7861 cctgcggcat aagctttttc gatgtattgg acggttagag gtaaaaaatc ttcttcaact
     7921 tgtttttctt ctcttgcaac tgtagctaga acaacgcttt tgccttgtct cattaaaaca
     7981 gcaccggcag cttgtttggc gactttgtct atatcaaata tttctgtatt tttgttaatt
     8041 tctatgctgt attgcattat ttttcctttt ttaccagata ataaattcgt aaaatttttt
     8101 aaaatattta gcaaatttca tcctttttaa attttgtttt cactttctgc taaagagaaa
     8161 tcgtatttta ctcctcctaa aggatagaag ttgaaaataa aataaactcc gctttgattt
     8221 ttagctgtga tgccaccact tgtgagttgt ggatcgattc tttctctata cattaaagaa
     8281 tagttccaac attttctttg gtaggtatag ccaagttccc acatgtttgc atgagctctt
     8341 tgagtatcaa accaaattcc accaaataaa ttgtaattag gtgtggcaat ataatttgct
     8401 cttgtgccaa taaagctata ttttccatac tcatcgtttt gataagcatg agaaaacatc
     8461 caattaaatt ttgaatttgt attgacttct atttggctga tgacattggt aaagcgactt
     8521 tgttcataag agtaaagcac ttcgctgtta agattgatgt tttcattaaa ataataagtt
     8581 aaaagatttt gaagttcata gaatttattt tgtttattga gatagtcaag tgaaattctg
     8641 tgtttgagtt ttttttgtcc ttcgttgtta tagaaatatt gcacagcata aagacttgta
     8701 tgttcgtttt ctttgtcgta ttcttcaaga taattttgcg tgattttacc tgattttgct
     8761 cctggtaaaa tgtaattcac ccctaaattt aaagtatgaa agaaattttc ataagctttt
     8821 gaaagatcgg tgtagagatt aaaatcatga gtgtttctga aataatgctc atggtttctt
     8881 tcgggatcgt tgctataatt tacaaaagaa gcataaaatc tttctgtaaa agtaaagtgt
     8941 aaaaagtctc caaaaaaagc gttgtgatac gagataggca agtctaaatt tagctcattt
     9001 gcataagaac cagcaggtcg gtaaaaatta tgaaatgaag catcaaatga ataacgcaag
     9061 cgttcatcaa aaaggttatt taaaaatcta tgatattgaa agcttggata ttcttgtaag
     9121 gttgtattgt tgctaagttt agatgtgtcg atataatatc ttgcataagc tccataaaaa
     9181 ttgttttcat cggctaaaaa ataattgatt ttggaggtta caagcgagtt aagatctcga
     9241 taatccctac ttcctaaatt taaataatcc acatcgttga gataggttgc atctatccat
     9301 aggccttctt gaaaattatc actgagtaaa gatttgatta aatcatctct tgagtatttt
     9361 agttctattc catagtgggt ttgatttttc aaattttcat cgtgaaaata ggagctattt
     9421 tccctaaaag caccaaaatt taattctcct gttgaatatg gagaatcaag aaatcttaaa
     9481 gtagaataaa gtccaaaacc acggtttgtt cgaatttgtg gatcaagttc taaatcccaa
     9541 ttttcttgag tggctatata aataggttgt tcatagtata agccttcgct actttttaaa
     9601 acgatttttg ggattaaaag cccgctttgt ctatgagtat cagcgctaaa tccaaaataa
     9661 ggtagataaa aaactggggt atttttaaca tataatcttg cattgtaaag atgaacaaaa
     9721 ttggtttccc ggttaagcca gccttttgaa aaacgaattt cccaatcagg atcttcaaca
     9781 ttgcagcttg aaactgctga aattttgctt tcaaagactt tatcatttag atggcttgtt
     9841 ttgctttgaa accatacttc aagattgtta ttggaaaaga aaaaattact aaaatcggct
     9901 tgattggaat ttaggttgat tttagcataa tcagaatgtg atctttcgtt ttgtcccctt
     9961 aggatgttaa catcgccaaa aagctcaaca tctccggttt tttcattgta aattgcttta
    10021 ttggcagtga tgaaataaaa atcagaaaaa ataataacat cattgtttgc agtaagaata
    10081 tcaccttctt tttttgcatc aagagcgtaa atatcaactt gtgctgcatt taaagctatg
    10141 ctagttccta gcaataggga aaatttacgc cacatcgact actattgtcc ttgctagata
    10201 atcctcccaa gctttgcgca aatcattgct taaagcccaa gcaaacccaa gcataaacgc
    10261 catagcacta acttgtctta tggcagatct gatgcaactt tggatgagat tgggtttgtc
    10321 gagaagattt tcatccaaga tgataatttt gcataatatt tttcccaaac ttgccccata
    10381 aagataagta aaaatcgctt gatagctaaa atgaagcaag atgaagccaa gataaaaatt
    10441 tcctataatt tgagtcgttt caaataaatc ttttgcttgg attagacgat cataaaaaat
    10501 gataaataca atcaaagaaa taaccatatc atcgattaaa aaagctagaa ctctttttcc
    10561 aaaacttgct atttttagat tttcacgctc taagcggtct tgtaaatttt ctttcattta
    10621 agaacctgat gagcgatgtc ttttctgtat tgttttcctt tgaaatttac attatcacaa
    10681 agtttataag catttttttg cgcttcttct atactttttc ctgtgccaac gcaaactaaa
    10741 actcttccac catcagccat taatttgcca tcttctaggc ttactccagc ataagaaata
    10801 tgagagtttt caggaatgtt atttacagta atttcacttt ttggtgaact tttgtaagga
    10861 tagttttcac tcgcgcatac aacccctact gcaaattctt ttttgatttt gattttcgcg
    10921 tgtcttaagc gtctttgagt agcagctaaa ataagctcta aaggatcttc gattaaaggc
    10981 attaaaactt cacattcagg atcgccaaag cgaacattaa attctaatac ataaggttta
    11041 tttccaacga tcatagcgcc tataaataaa acgccacaaa attccgctcc ttcttttttc
    11101 atacctgcta aagtcggtaa aataatatct ttttgaactt ttctaagcaa actttcattc
    11161 gctaaagagc taggggcgta agcacccatt ccaccagtat ttggcccttg atcattatcg
    11221 agtaattttt tgtgatcttg tgctgcagga agtaaaacaa aatcattgcc atcacatact
    11281 gcaaaaatgc ttaattcata accgtctaaa aattcttcaa ttacaacgag ttttccagca
    11341 tctccaaagc tttctccact aagcatttta gctgtttctt ctatagcttc ttcatgagtt
    11401 ttagctataa taacgccttt tccggcacaa agtccatcag cttttactac tatgggaggg
    11461 gttaaactat atataaaatt ttttgctttt tcaatgtcat ttgtgtttaa aaatttggct
    11521 gttttgatgc ggtatttttt aagaaagctt ttcataaaag attttgaggt ttcaagcatt
    11581 gcagcagctt tgcttggccc aaaaatagca agtccttgtt gtttaaaaat atctacaacc
    11641 ccttcagcta aaaaactttc acttcctact atacaaagat caaaaccttt ttcttttgca
    11701 taggttgcta aaactactgg atcttttagg tttaaatttg ttccaagact ttcggtagcg
    11761 ccatttccag gagcaaaata aaactctaaa tttttgtcta ctcttcttaa ggctaaagca
    11821 atagagtatt ctcttgcgcc actacccaaa atcattattt tcatttatat ctccttttaa
    11881 acccaaacag ccgtttaaca aagattgacc ccaaaaagtc aaagaaaacc gctaggtaat
    11941 ttttaaaggc tgcaacttct cgcttttttc aaagctcaaa cgatgccaca gaacacggta
    12001 aatcacacaa tcgcagttaa taaaaatgtg ttgaatcact ttaaatacca caaactgttt
    12061 aggcaaggaa attataactt aatttagctt aaatttctat gtcttaaatc agtttaaatt
    12121 tggtttttcc tgatttgtca aaatgctttc cttgtaaaat aatatcggca acattttccc
    12181 aaacatgttt ttcatcaata tagactatat caaaggtgtt atcacgcatt aaagactgat
    12241 aatttacttt tttaggtgcg tattttacta aataatacgg attttgtgaa aagttttcaa
    12301 tttttaattt gcataataaa tctaaatccg atgtgacaac taaaaatttt tttctttgtt
    12361 cttttgtgat tttttgaata tacactaaaa gtttttgatc aaaaggattt agagcggatt
    12421 tatttaagcg acttaagtaa tgttctgcaa aagaaagaga acagaaagaa ttttctatat
    12481 tactcatagt aaaataagaa tttttaaccc ctgatgattt taaagataag tgccaaattt
    12541 taacatccat tatggttgcg catagattta aacctgtgac aattttttta aagagctttt
    12601 ctcgtgaaag tttaaaagca ttttcgaaaa tattgtaatt tttcttataa aaatcttccc
    12661 ttatagcatc aagtcttttt agtgttgttc tgtagtattc tgcttctttt tgtagtttag
    12721 tcaatctttc ttgtcgtgct ttaagttttt cagggtctgc attggccgca ttgcttttaa
    12781 gatttatttc agattgtaaa gttttcattt gtgcttcaag tgaggctaga cgattgtttc
    12841 ttgtatctat ggtggctact aaagcttggt aatgacactg caaagataaa aaagtttcgt
    12901 taaaaatttt agtgatattt ggtttttgat cagctatcat ttgcttgtat gaattctcta
    12961 aatgcatcat gatgcttttt aatgcgctaa attgggtttg gtctatgcta ttatccataa
    13021 aaattaaagt atcataagct ttaaataaaa atcttttaag tataagataa tcaagtatgc
    13081 agggaatttc cttttcatct tgtagattgg cttgaagtgt ttctacggat aaaatttcat
    13141 gagcaaaata tttttgtata gcttgaggta tagtaaaaga aagaggaatt ttttctatag
    13201 tgtcaaagtc tgtcgttcta taaagttctg ttatataagc acttcttctt gagttttgca
    13261 agtcttctaa ttcatcatca ttatcagttt tccaaaaatc atgctcagtg ataaaatccc
    13321 cttctttaaa ttcttgaaat tttgaaggtt ttatacctgt tatggttttg cttgtttgaa
    13381 cgggcttgcc gtcttctgct tttttttcgc tagaaagagt tctaaattcc acaagcatac
    13441 caacacttgg catacttttt ttatcattcc aaatttggcg attgaagtca aaaaaggtat
    13501 ttgctgagtt tgtaacggtt ccacgtcctg tagaatccat ataaatagct atttttccat
    13561 gcatatttct tccttgaaat ttcttgaata aattctagcc ttatttttat aaaaatttta
    13621 taataaaaat aagagctaga aaaaatggat cattcccatt ctatggttgc aggtggtttg
    13681 cttgagatat cataaacaac gcggtttata ccttctactt cattgatgat acggcgactt
    13741 atgttttcta aaacttcata aggtaaatgc gagaaagtag ctgtcatacc atcgcttgca
    13801 tctacaacgc gtatgcaaac tgcattatca taagtgcggt tatcccccat aaccccaacg
    13861 cttttaatat ttaaaagcac gcaaaatgct tgccaagttt tatcatacca acctgtactt
    13921 ttaagttctt cgagtaaaat tacatcagcc ttgcgcaata gttctaagct agggcgattt
    13981 acttctccca taatgcgtat agcaagccct ggcccaggga aaggatggcg ataaaccact
    14041 tctttgctaa gtccaagctc aagccctaaa gcacgcactt catctttaaa aatttctttt
    14101 aaaggctcta tgagtttaag attcattttt tcaggtaagc cccctacatt atgatggctt
    14161 ttaatggttt tgcttgcacc tacaacagaa ctttctatga tatcagtata aagtgtgcct
    14221 tgagcgagat attttacatc tttatgtttt tttgcttctt cttcaaaaac ttctataaag
    14281 gtatttccta tgatttttct tttttgctca ggatctctaa cattagccaa gcgacttagg
    14341 aaaatttcac ttgcatcaat gctgataaga tcgataccta aggtattttt aaacataaat
    14401 tcaacttgtt ctttttctcc acttcttaaa agtccattgt ctacaaaaac tactataact
    14461 tgctctttta tagcgctagc taaaagtgca gcaactacgc tactatctac tccgccactt
    14521 actgcgcaaa gcactttatc actgcctact tcttcacgga ttttttctgc ttgagttttt
    14581 gcaaaagaac ccatattcca aacgctttca caattgcaag cgtatttagc aaaatttttt
    14641 aagatatttt tgccaaattc actgtgttgt acttctgggt gaaattgtag agcaaagaat
    14701 ttcttatctt catttccaaa aacacaaaaa ggactatttt cacttgtggc taaaacttca
    14761 aaaccttgag gtaaattttc taccttatca gaatgactca tccaaacagt ttgttttttt
    14821 ggaagatttt taaacaaagc gctatctttt ttaacttcta tgtttgcttt gccgtattct
    14881 ttatgtcctg caggtgctac tgtagctttg taatgatgtg ccataagctg cataccataa
    14941 caaattccaa gaataggtaa acctaagtca aatatacctt tatcgcaaaa atacgcatca
    15001 gttgcatata cgcttgctgg acctccgctt aaaataatac cttttggttc tttcgcctta
    15061 atatcagcta agctcacatt aaaaggtaaa atttctgcat aaactccttg ttcccttaag
    15121 cgtcttgcta taagctgagt gtattgagag ccaaagtcta aaactaaaat atctgctttt
    15181 ttcattattt accacctatg taattgttcg tattttttaa tggtttttac cgaaccattt
    15241 tgttcatagc ttgtgtattg agggttgcct ttatatccgc aagcacagaa gaaaattaag
    15301 aaaagaaatg ctaaaatcat cttatgggaa aaagaaataa tattaagatg actaaaaacg
    15361 ctagtgctgt tattaatgaa ttgatggata aacctcatta taagccttta aaaaccttat
    15421 ttttttgcaa agatttttta agttcttttc cgcttgctaa gcaacgtttg attgctaaaa
    15481 tttatgtaaa aaatcatatt ttaaatataa taaccttaca tccagcagct tatcaagaat
    15541 taaatcatga tgatagcaaa atttatatta aatttctcat aaaagcgtat ggacaaaaat
    15601 atcctttaag tggatttgtt gatataaaag atataaaaat cttttctcaa aaatacactt
    15661 atgcagtaaa taaaaacaaa aatgatgaaa aactctctaa aaattcttat ttggagcttt
    15721 ctaagggtga atttaaaaat tgctttgaag atgaaaaatt atttaagaaa tttgaagatt
    15781 taagagagct tataaaaaaa ggttctaatc ttgactaaag agaatttaga aaatgagtta
    15841 aaaactcttc ctaatagtgc tggagtgtat caatatttta atcaagaagg aaagctttta
    15901 tatgtaggta aggctaaaaa tcttaaaaat cgtgtcaaat cttatttcgc ttttactcca
    15961 aatttacatg caaacccaag aaattcttta agaattcaaa aaatgattga agaaacagtg
    16021 catttggaat ttatcactac taattcagaa gccgatgctt tgattttgga aaattctttt
    16081 atcaaacaac tgcatccaaa atataatatt ttactaagag atgataaaac ttatccttat
    16141 atttatgtgg attttgaaga agaatttcca cgctttgaga tcactagaaa attagtaaaa
    16201 aaaagcaaaa ttaaatattt tggccctttt tttaaaggcg ctagagagct tttagatgcg
    16261 ctttatttat actatccttt aaagcaaaaa gcaagttgta aatccccttg tattttttat
    16321 caaatttctc gttgtcttgc gccttgtgat aaacgcatta gcagggaaaa ataccttgaa
    16381 attttagatg aggctatgca cgcgctttta aatcctagta ttttaataaa aaatttagaa
    16441 aaacaaatgc ttgttttagc acagaatgaa aattatgaag aagcagctaa agtaagagat
    16501 cagattgtaa cgattaagga tttagaagtt aaggttgaaa tagatattgc aaaattagaa
    16561 gattttgaag tatttgcttt agcttttgaa aattccatgc tttcaacctt gcgttttgta
    16621 gtgcaaaatg gaaaaattat cagtgtaaat tctaagatta ctcctataaa aaatgatata
    16681 caatgggata aaaatgaaat ttataagcaa ctgattttag aaaattttag catggatatt
    16741 cctttgcttg caaatgttat ttatgtttat gaagaatttg aagatagaat gcttttagaa
    16801 gaaattttaa gccaaaggtt tgataaaaaa atcagtatta aaatccctaa aataggagaa
    16861 aaaagaagaa tttgtgattt ggcttttcaa aatgcccttt taaatataga aaaagagcaa
    16921 aaaaatcatg attttactat acaaaaagaa ttaaagtctt attttgagct tgaaaattta
    16981 ccaaatgata tagaaatttt tgataattct catttgcaag gcgtggcaaa tgttggagct
    17041 atggtaactt atagtgcaaa ttcttgggat aagtcaaaat atcgcaaatt tcatttaaaa
    17101 cataaaaatg attatgatca aatgcgtgaa gttttaatgc gtagggtttt ggactttgat
    17161 aaaatacccc ctcctgattt atggcttata gatggaggca aggctttgct tgatttggct
    17221 aaagaaatca ttgtaagtag tggggcaaat gtcgatattt tagctatttc aaaagaaaaa
    17281 atcgatgcaa aagcacatag ggctaaagga ggtgctagag ataaaattca ttccttaaaa
    17341 ggagaattta gcctaagtat taacgataaa aaactacaat tcttacagaa attaagagat
    17401 gaagcgcatc gttttgctat cagctttcat caaaatacta agaaaaaaca ggacttgaat
    17461 agttctaagc ttgtaaattt aggacttagt tcaggggtta tacaaaaact tttagcgtat
    17521 tatggaaatt ttgaatctat atataaggct gattttaaag atcttgcaat gcttgtaggc
    17581 aagaaagtgg cacaaaagat aaaggaaaat tgatttgata ttagcaggga taatttttat
    17641 ttttaatcta attttagcgt atttaagtat tgatatctca aagcttgata gtgttgctga
    17701 acaactgaaa ataggtatgt tttctagcat ttttgtttta tctttaacac tttttatttt
    17761 tgcttttaga caaaatagaa atataaacaa aatatatcaa aaaatttttt acatgcaaaa
    17821 tgatttttta aattttcaaa aaaagattga tgttgatagc gtgcttgatt tgttaaagga
    17881 aaaatttgaa actacgggtc aaaatttaac taaaacatcc catgaaaaag atagatattt
    17941 gcatttattg gaggaaaatt tatatcagct tggaaatata tccaatgcaa tgcgttgctt
    18001 aaatgaaggg tataataaag aaattaattc tttgatttta aatgccttaa attctcaaaa
    18061 agatcaaatt agattagaat taaatgaggc tttagagcat cataaaagca ttatagggac
    18121 atctcatgga aaggttttgc aatttgaagc aagtgtggct atagttaata atgatgagct
    18181 tgagaatttt ttacttgcaa atttactttc gtattttggc atagaaagca cttgttttaa
    18241 aaatttaagt tttgatgtta atgactttca tttgattttt atcaaggata aaattttaaa
    18301 tgaaaatgta aagaaaaact atgattttat agtgatgggt cgccataaaa atacacatta
    18361 tgagtatttt ttaactttac cttttgaaaa aaaagatctt gaaaatattt tgcaaaacaa
    18421 gcttgataag gtttgcactt taaaatttaa aaccccttat caaaataatg tattgctttt
    18481 taaacaaaat gattttgatg caaccttatt ttttaatata atagaaaaac aatgcgataa
    18541 aaatgtatgt ataaattctt ttagtcaatt aaaacaagaa ttaagcaagg agacttatcg
    18601 tttgattttg cttgattatg aattaattaa atttgatctt gagcaaatga gaaatttgtt
    18661 aagtgcttat aaaaaacagc atccacaaag ccatatcatc tttttttcaa aggaaaaagt
    18721 tggggatttt gattgtgtga gcgaagtttt aagtgatgta agtagaaatg atcttataac
    18781 tttacttaga aagtatttac caaaggccta agctttataa aatttaactc cagctaaatc
    18841 gagaattttt accttttttt ctttgataag ttgatttaag agagttttgg attgttcatc
    18901 aaatttcact tcaatgtcta tttcgctttg tgagcgcaaa tgaagcattt ttaataattc
    18961 ttcttcattg aagcttagtt tttcaccttc ataatgtctt ttggctaaga gtacaggagt
    19021 agaatctata agtttagaaa gttctaaaag tttttcttcg cttacttttt taacggcata
    19081 agcaggaggt ctatctatgg tgcttagatc aacccttaaa ggcatgattt tttttaaagc
    19141 ttgattaagt gcttcaaatt cttcttcgtt gtcattaaga tctttaacaa ctagaatttc
    19201 cataatcaaa tctccgttaa atctagctct aaaatctgcc attttttcta tcattttttc
    19261 taaatctatg ttttttaaag ctctatcaat acgataaaaa gttttagcaa ctgcactatc
    19321 taggctaaat ttgaccacat ctagttttag caaagcatta aatttgtctt cgtctaatac
    19381 agctgtgcca ttgcttaaaa taagcaattt tttatcttta gcaatgctgc gtaaagataa
    19441 aataagctca tttaaatgag gataaagact aggctctccg ttagcagtaa gggtaagaaa
    19501 atcaaattca acattttttt caagcacaac tttaacttcg gagataattt tatctatgct
    19561 gataatttca tcctgttttt cttgggcttt ttttggatca agctcacaat aaacacaatc
    19621 aaaattgcat tgttttttgc tagggcttaa atctataccc aaagatcttc caaaacgcct
    19681 tgagctaaca ggaccaaaga gtattttcat ttagctgaac tttcttgtac aagcttgata
    19741 aaatattttg cattttcaac aggaatatca ggcaagatcc catgtcctaa gttgaaaata
    19801 tgagctttat tttgcatggt ttttagtatt ttttccactc cttctttgat ggcattttta
    19861 tcataaagtc tgcaaggctc catgttgcct tgaagagtgt atttgtgtga tagtttatca
    19921 cgtgctaaat caagcggagt gctccaatca accccaaaaa catcaaaatt accatcgatt
    19981 ctatccaaat aaccactaat gcctttaggg aataaaatta caggtatatt tgggtatttg
    20041 cttttaataa aatttgaaat ttcaagcata taattaaaag agaattcaaa aaacttatcg
    20101 tattctaaag cacttgccca gctatcaaaa atttgtatag cattagcacc tgctttaatt
    20161 tgctcttcta aataaagttt taaaacttga gttagtttgt ttagaatttt atgtaaaagt
    20221 tctgggtttt gataaagcat ttttttacac tttgcataat ttttacttcc acttccttct
    20281 atcatatagg tagctatagt ccaagggctt ccgcaaaatc ctattaaagc cttgttttga
    20341 gataattttt ctctagtaag ctttaaggca tcatagacat aatttaattt tttatgtgca
    20401 ttttgatcgt caagtttttc taagtcttct agggttgaaa taggattatc aaaaacaggc
    20461 ccttctcctt tttcaaaacg taaattcata cccatttcaa gaggaacaac taagatatct
    20521 gaaaaaatga ttgctgcatc tacatctaaa atatcaatag gctgtaaaga aacttcagaa
    20581 gcttttttat agtctttaca taaagagaga aaatcacccg cttgttttct tacttccata
    20641 tattctggca aatatcttcc tgcttgacgc atcatccaaa taggggtgta gggtgtaggt
    20701 tttttaaagc aagcatcaat aaaaatcatt attttccttt gtttttagca aaattataac
    20761 agaatttgat aaattaaatt ggtcaatttt tctatatttt cttcatatgg aggaaataat
    20821 aaattttttc attttatcca gagttatgag aaattttacg agaattattg gaattctcgt
    20881 ttgtgtagtt tgagttttga tttgtatatt aagcctttgt attgtttgtg gcatttcctg
    20941 cgtcaattgt agcaaaaagc ttatttagca aagtctcctc attttttttg tattgatctt
    21001 ctctcatttt ttgccaagca taagatctaa aatcttctct aacagcacca agatcaatgt
    21061 cttcattagt aaatttgctt gagcttgttt tttcttcttc cttttcttct ttgtttttta
    21121 cttcatttaa tgtggcttga aattcatctg ctgaagtatt tttctcttta acctttgttg
    21181 tggtgctaaa aatagcattt gatgtttttt gagtattatc tactaccatt ttctcctcct
    21241 ttatttaact ttacattaaa taaacaagca atttctattc caatttatat cttttttaaa
    21301 ctttttcttt gaaatttttt ataatttaat ttatctttgg caaaaagtaa ggcaaaaatc
    21361 aaagcagggc ttacaaaaag tgccgaaaat aaagcattaa attctatacc caatcccgct
    21421 aaaacaatcc cacctaaaaa acttgctaaa gctatgccta cattaaaagc tgcttcattc
    21481 acacttactg tgctgtctat gactttataa gtgtggcgtt tagctttagc aatgctaagc
    21541 atttttagcg caggtatggt tgaaaaggca aaaaatccta tcaaagctac gctaaaaatg
    21601 attaaaattt tagaatgcat ggtgagaaat acgcttaaga atactagaac ttgtatgctt
    21661 aaaataagac gcagggaaaa aatagcaccc tttttatcta ctatttttcc gccccataaa
    21721 ttcccgcaaa ttgcgcaaat tccatataaa agcaagatat aagctgtatc ttggacttta
    21781 aaaccgctta tttctacaag taatttttgc aaataagtgt aaagaacgaa ttgagcccca
    21841 caactacaaa tggttatagt ataagttttt aacaaatttt gatgcgaaaa agcagggatt
    21901 agatttttaa gacttgttgg actaggatgt aaatttttgg gcatcatatg ccatactcca
    21961 aaaaatgcta ggcttgtaat gataaaaata agtaaaaaga taaatttaaa gccaaaataa
    22021 tgtcctataa aagttccaag tggtactcca gtaactaagg ctacggtaag tcctgtgacc
    22081 attatagcta gagcacttga ttttttatca ttaggtacta tagcacttac agctaaggta
    22141 gcaatgacaa aaaacacccc atgctgtgtt cctgctataa aacgcgcaaa tgctgtaaga
    22201 tagaaatttt ggctaaaaaa gatgatgaaa tttgctaaag caaaaattcc aagattactt
    22261 aaaagttgtg tatgtctatg aaaatgactt aaaggtatgg tgataagagg agcacctata
    22321 acaacaccta tggcatataa agttgtaaga tatcctgcgg tttttgcatc tacgctaaaa
    22381 tacgcttcaa catcaatcaa aactcctgcc atgacaaatt cggttacacc catacaaaaa
    22441 gcactaagag ctagtgcaaa aagagctttt ttgtaatttt gcattttaat ttccttataa
    22501 aaaataaaaa ctcattataa taaaataaag gcttaatttc cttaaaaaat tcaaaatatt
    22561 tttgttaaaa taaaataaaa attttaaagg agtaaaaatg aaaaaaatta tttttttatt
    22621 tggtttaagt ttggcgagtt tagaggcttt gagttttgat gagcttattt ataaagatga
    22681 ggtaaaacct agttttgatt gttctaaggt gaaagatgat ggcaaaagtg atgatgagct
    22741 tatgatatgt aatgaaattg gcgtgcgcaa tgaatttgag aataaaaaac ttgctttagc
    22801 agataatatc tatagtagtt tgtatcaaaa tatttcaaaa aaagcagata aaaagatgaa
    22861 aaaagatttt aaagccattt caaaaaagat gcttaaagaa agaaaaattt gtataaaaaa
    22921 tatgcaaaat acaaaagcag gggaaaatcc tattttgcct ttactcaatg caagtgattg
    22981 catgcaagaa gcttatatta aggctttatt agaacttatg caaagagcaa aaaaagatac
    23041 aaaaactaaa gaagttttag agcaaatttt taaaaataaa gttgataaat atgaaaattt
    23101 actcactcaa agtttaaata ccaataaaga tttgcaagat tttatagaca gcttggctaa
    23161 agaagatttg attgattcta gggctaaatt taagttttaa ggcttaaatt gattgcaaat
    23221 ttagccgctt caaaataact tttagtgttg attttagcat ttttataggc cttgtcaaag
    23281 gccgtgccat gatcaacact gacgcgtatg atgggtaaat ttaaactcac attgatgctt
    23341 ttatcaaaat acaaggcctt taaaggagca agggcaagat cgtgatacat agccactaaa
    23401 cgattgcagt tttttaaacc agccttggta aaagctgtat cagctactaa aggatagggt
    23461 agataaacgc ccttgccttt aaaatttaaa agcaattctt tctgtaaatt ttcatctttt
    23521 aaggcttttt tgaaaaattt ttcatctttt ttagagtgta aaaaggcatt gacaaaggct
    23581 atagcttttt ccatgatttt ttcttcttct ccacctataa ctccataatc tccagcgtga
    23641 ggattaaaac ctaaaagtcc tattttttta aaatgcgttt ctttgtaaaa atcttttaaa
    23701 aagatactta aatttttaaa agtgattttt ttactcacct tagctaaagg tatatgttcg
    23761 ctaaaaagcc ctacaaaaag ttctttacaa cctaacatca taatggcatt ttttttaaaa
    23821 aaatccctta aagcatcggt gtgtcctttg tatttaagtc ctgcatcttc ccaagctttt
    23881 ttgtgtatag gtagagtaag taaggcatgt gcgtgttttt catagacaaa ataacttgcc
    23941 gccttaaagc ttaaaaaacc ataaagtccg ctttttgcat ctatttctcc ggctttgatt
    24001 tcaaaatttt catccacttt aaagcctaaa ggaaggcaaa aagagtaaat ttcaagagaa
    24061 ttttcttttt ttataaaatt aaactcatag tctttgtcat ctttaaaagc tacgattttt
    24121 gcattaaaaa gttttaaatt taaaagtttt gaagctttat taagcaagtt ttcgtggata
    24181 aaataaaaag gtgtgcagat tttgcttagt tcttcatgag aacgcactaa aatttcaagt
    24241 cctatgccgt ttatatcgcc tatgctaatg gctagttttt tcatctttta ataagttctt
    24301 tcatttctaa aatagcgttt tgaagtcctg taaatacaga tcttgctaca atgctttgtc
    24361 ctatatttag ctcacaaatt tctttaattt ttactacggg ttttacattt ttgtaattta
    24421 aaccatgtcc tgcagctact tttaaaccaa gttctgtgcc ttttttggca cagagtttta
    24481 aattttgtaa ttctttttca aattgagctt gtaggttttt tttatcttga ccaagttctt
    24541 ttaaggcaaa agcagtatga gagatattac taaaaagtgc gttgtgtaaa ttcgcataat
    24601 gtcctgtatg aagctctatg aattgggctt ttaaattttt tgatttttct atatcttcta
    24661 aactaggatt gataaaaagt gaaacttcaa tgtttgcatt ttgaagtttt tctatgcttt
    24721 gttttaattt agtatgattt aaacaaagtc ccccttctgt agtaagctct tctctttttt
    24781 caggcactaa agtaacacgg tggggtttga gtttaagagc taaatttaaa atttcatcat
    24841 ttaaagcaca ttctaaattg atagggcttt tgcaaaattt tatgatattt tccaagtcaa
    24901 aatcctgagc atgacggcga tcttctctta catgcaaagt gatttgatct ccgtgtttag
    24961 ctgctataaa agcagcctct aaaagatcag gatcatttac cattctagct tgtcttaaca
    25021 ctgcgatatg atcgatattt acacctaaaa gcatattttt cctttagaac ttttttgcta
    25081 ttatactata aaatcaaaca aggaaagtca tgttaggtat agatcttggt tcaaatactt
    25141 taagagcagt acaaatggat gaaaaattaa ataaattaaa agaatatgaa tttgttattg
    25201 gggcagcgaa aaatctaaat caaagtggag aaatttcgaa agaagccata caaagattaa
    25261 aaaatgcttt gagtattttg gctaaagagc aagatttaag caaagcaaga gctgtagcga
    25321 ctgcagcctt tagaaaagca agcaatacaa atgaaatttt tgcccattta aaagaagaat
    25381 ttgggattga ttttaagctt atagatgcca aaagtgaagc taagatcagt gttttaggta
    25441 tgcaatcagg tttaagaagg cttaaaattt ggggagagtt tgcgtattgt gatttaggag
    25501 gggcttcttg tgagctttct tttagaaaaa gttttaaaag ttttgatttt ggtattatta
    25561 gtttttatga aaaaaattgc cattcttatt ataaatcttg tatttcttat aaaaaattga
    25621 taaaaaaata tcctaaattt atcatcaata ttaaagataa aaaacttaaa attcattttt
    25681 taattgcaaa tccctattta aagcatttag cttttatggc ttttgatgag gtggctatga
    25741 ttaaaaagga acttcgttct ttaggagtta aaacggtggt tttaaattcc ggagttccta
    25801 ctacgcttag cgcattaaaa caaaatataa actatgaaaa gtatgaagca actagagtaa
    25861 atggtaaaaa actttgccat aaggattttt taaattatgc tattaaactt tttcatatgg
    25921 aagaaaaaaa ggctataaaa gaagtaggta tgatgagaaa aaattatttg agtgcaggtt
    25981 gtttgctgtt ttatgctttg tttgataaac ataaacttct agtcattgat gagggtttaa
    26041 gggagggagt ttgtttagca agtatgaaaa atataaaatt ttagtttttt tgaaattcga
    26101 aaaaatgaaa tttttcatca aaattaaaaa ataaaatttt agcttgagat aaaaaacttt
    26161 cgtaagtttt aatgttttta ttttttgtgt attctaataa atcttcaaaa ccaaaatcca
    26221 ttaaagcaag actttgtttt ttaaaagcta aaggtttaaa atcatattct ttgatgagtt
    26281 tttgaagatg ggtaaaattg acattataag ttagatcact tttgccgaaa aaatctttta
    26341 aagatacttc aaaagggcta aaaacttcgt gcttttgata gattcttaag ctaaaatttt
    26401 gtggattcaa agttccatag tcaaatcccg caaatataaa tctctcgcaa gcttgatcta
    26461 aatctttaaa aaaattttca agctctaaac tgagttcgcc ttttgtaaga tttaaagctt
    26521 tgcattttgt gatcaaattt tcatccatat ttttaaaaat aagtttaaaa ttttctacaa
    26581 atgccatttt atcatgatct ataagttcac aagtaaaact atcaaaaagt tcattgcaaa
    26641 agaaaaaagc gttcttaaaa tggcattctt taagactatt tttgtgagta aattccactc
    26701 cttctaaggt ctttttctgt aaatttttta atttttcatg tggttctatg acgaaaaaag
    26761 aaatttgaga aaaaatttca ggccttaatt caagtaaagc ggctaaaaaa tcacgactta
    26821 aatagccttc attagcacct atttctacaa gttctaaagg gggttgtaaa atttttttat
    26881 ctattaaatt taaaaaatgc ttggctaaaa gtgtgctaaa aagatttcct acgctaacag
    26941 cagtaaaaaa atccccattt tttcctatac ttacagcatt tttataatag ctttcatgta
    27001 gccaagcatg gaaaaagtca ctaaatttca ttgaaaaata gcattaaatt tggatacaaa
    27061 atccaaagga tcaacttgtt tgcctccagc taaaattcca aaatgcaaat gcggcccact
    27121 taccctacca ctagctccgc taagtcctat aagctcacct ttttttatct tttgtcctac
    27181 tttaacattg attttagaaa gatgataata ttgtgaataa attccaaagc catgatcaat
    27241 gactaccgaa tttcctgcaa aataacgatc ttttgcgatt tttactatac ctgaattggc
    27301 tgcataaata ggtgttcctg tagcggctct aaagtccgtt ccgctatgat aacttgctac
    27361 tttttcatta aaagttcttg ctttgccaaa atcacttgtg ataaaagaat ttaaaggtat
    27421 attaaaagca ccgttaaata aagcttttgg agtataagag ctataaatcg cattggcttc
    27481 ttttaattct ttagcgatgc gttcttgtac ggtttttggt ggaaaaatct ttttgttttc
    27541 aacttgcaat ttttcacttt tataattacc ttctaaagtt tttatgaaaa tttcttcttt
    27601 tttatcttta taaaatgcga taagtttggt gttttgcggg ggatttttgt aaggtaggga
    27661 aaaaatagct agaatttttt cttgattttt aggatgcgca aatgtgggaa tatttttatc
    27721 attatttttt aaagataaaa aatttttctt atctagttcc aaaaataaag cttgaccttt
    27781 gatgagttct aaattttgag ctccaaaaag ccaaagagta aggcttaaaa gaatccataa
    27841 ggctttcata ggcttaactc tttaagatcg gcgattttta aaaactccgc ataaatttca
    27901 taaactaaag cttggcgatt gtttttaagt ttttcatctt cagcattaat catcacttga
    27961 ttaaaaaact catcgataaa aggcttgagc gcaaaaagat tttcaagttt ttcttgtaaa
    28021 gagttggctt tagttttttc ttgaaaagct ttgtaaagtt tgctttctgc ttcttgaaca
    28081 aaaagacttt catcaacttt atgaggattt ttagtggcga tattggccag tcttttaaag
    28141 gttgcaaaat tttcattaaa attgtctttt ttgctaagtt ctataagagc atttacgctt
    28201 tgattgatat ggataagatc tgtattttgt gagcttaaaa ccgcttttac aaaagaagca
    28261 ttgaccgtat aaaaagtata aagtctttca aaaataaaat cttttaaaat ttgcatatca
    28321 aagcttttat aatgacttga aagtttttct aataaaattt ggatatcaaa ttctttattt
    28381 aaatttagag cgattttaat gatcccattg gctgctcttc ttaaggcata aggatccttt
    28441 gttccgcttg gaatttttcc tatgctaaaa agtcctataa gggtatcaag cttgtttgca
    28501 agggctacta tgcttgaaaa ttccgtgctt ggaagtggag cttgttcgga attaggaaga
    28561 tattgttctt tgatggctaa gcaaatttca taatctaagc ccattttttg cgcataataa
    28621 cttcccataa tgccttgcaa atcagtaaat tcataaacca tttgtgtggc taagtctgct
    28681 ttggcgtatt ttagtgctgt gctgatattt tcgattttat cattatgaag catttgacat
    28741 aaaatttcag caattttaat ctctcttaaa cttttatctt gcattgtgcc taaaccttca
    28801 agataggtca ttttggcaag tttttcaggt tttaaaccat tttgtaaatc attttgataa
    28861 aaaaacattg catcgctaag tcttgcacgc aaaactcttt catttccatg tatgattttt
    28921 gaataatctt tacatactgc attgcttact actataaaat gattacttaa gcctttatcg
    28981 ttaaaaactg caaaataacg ttgattttct ctcattgaag tgatgattac ttcgccagga
    29041 atttctaaaa attcttcttc aaagcttcct aaaagtgcat tagggtattc tgtgatagca
    29101 actacttcag ctaaaagttc ttcatcctct ccaatttgta tatttttttg actttctatg
    29161 agtttaaatt gctcaagtat tttttctttt cttttgtttg gatcaaggat aatatagttt
    29221 ttttctagta gttcaaaata ttcttttgca ttgttaaaat cttgcaaatc ataacttaca
    29281 cttctgtgaa tgaaagtttt tttagcactt tttaccccat aactttgaaa atttacaagt
    29341 tcatcattta aaatgcaagc tatagaacgg atcgcacgga tgaattcaaa agaatttgca
    29401 ccccagcgca tacttttgcc aaaactaaga ctttttagaa atttttctat catttctcct
    29461 aaaatttctt gactttgtaa acctttaata gctttttgat ggtataaaac ttccttgcct
    29521 ttgatttctt taaaagtgag ttcattttca ctgatccctg ctttttgtag gaagctttgc
    29581 cccgcaggag ttaaaacccc atctttatag gcgacatttt taggtgctcc tataaattca
    29641 gcaaagctat cttcttgttt ttctgcaaaa ttttcatgaa aaaaaactaa acgacgcgga
    29701 gtataataaa atttaaaatc atttaccaag cggtattctt ctaaaacatt tttccatttt
    29761 ttttctatat tagctaattc ttttagcaaa ggaatagcag gtaattcttc tgtgccaatt
    29821 tctattaata attcactcat aatttactct ttttaaaatt tatttctaat tttaactaaa
    29881 atttcattaa aaaacttata aatacttttc caaaaaacct ttaagttcac tagcgttgct
    29941 aaattcattt tcttttaaat ctttttgata ccatttggca tgaaaataag gcaaattagc
    30001 atttttagca cattctttat ctttttgact atcccctata aaaacgcttg ttttatatgg
    30061 agcctcactt tttaaaagct ctagcatcat aggatgaggt ttgggttcta tgcccaagtt
    30121 tacgcctaaa attttatcaa aataaggaat gatttgatgt tttttaagta tgtttgaaag
    30181 tgagctttgc ggggcgttag tagcaatagc taaaaaacaa tttttgcttt ttaaaaattc
    30241 caaaagttct ttcacccctt caaaaagcac cacgctttgt tcatagtgtt tgacaaaata
    30301 tttttcatag ccttctttaa aactagaatg atggaaattt tctatattat aaagttcttt
    30361 tgcccagtca atattaggag tattgatggt ttgcataatg atttctcttg aaagtggggc
    30421 taggtttaaa tcctgtctta tttcattgac tgtacaagaa atggcatttg cgctatcgat
    30481 taaagttcca tccatatcaa aaaatacatt aatcattcat aatcctttaa ataattttta
    30541 tgtttttctt ttttttcacc ttgttttttt tgcttatcta aagcattggc aagatttaaa
    30601 agttcgcttt tttctttgga aaaatctaaa caagcattga caaaaaattc aagatttttt
    30661 gcgtaagttg agttaagatt taccgcggga tttttttcaa aaaatttagc attttttaac
    30721 attctttctt caaatttagt tttatcaaaa tcttcttttt taagtgcaga tatagcgcca
    30781 ttgaaaaatt tttcaagatt tcttaggtat tttacgcgta aggctttttc ttcatttttt
    30841 gtcaaaattc ttccttaggt atttttatga atgcggcatt ctagtgcttc ttgaactaaa
    30901 tttctagcga ttactttttc agagcgaatg atgcgtatat tttcatctat gctagaaaaa
    30961 agcatctttt tcaaagttcc atttacatga atgatagtat ctataggttt tggataatta
    31021 gctagcactt gacataaaat ttcaagttta gcttcatttg taactgtgat aatagctacg
    31081 gcacattctt ctatattggc aatttttaag gtttcttctt gagcagcatt ggcaaaaacg
    31141 acattttcac cccgactaac tccaagttct actaaattta aatcactttc taaaacaaga
    31201 taaggtacgc ctgtgttttt gattttttgt acgacttctt gacctaaacg tccgtagcca
    31261 aaaacaacaa gatgattttt aagcttgata ttgctgtcaa tattttgcac agcgttggta
    31321 ttaagtgcta tatcttctac aacattggta atttttctta tattgtttaa aataaaaggc
    31381 gtgataatca tggttaagat agaaacaaca attaaaattt gtgaagtttt gatatcaagc
    31441 atattttttg cttgtaaaag agaaaaaatt gctagggcga attcgccaat ttgcgctatg
    31501 gcaaaagctg ttttaagcgc tactcttttt ttggtgtaaa gaaataaaaa gccaaaaact
    31561 atgccaaatt ttaaagccat tacaagaagg gttaaaacta tgattaaaaa ccaattttgc
    31621 gccactacat caagttgaat ttgcatgcct acagttatga aaaaaagccc taaaagcaaa
    31681 tctctaaatg ggattaagtc cgcttctatt ttgtgtttat attttgtttc tgctatcaaa
    31741 gcacctgcta taaaagcacc caaagaataa gaaaatccaa aataatttgc taaaaaactt
    31801 gctccaataa ccataaataa aacagtacta ataaaaattt cctgagaaga ggtgtggata
    31861 atgagtctaa aaattctatc cactagatat ttacctatga aaaataataa agtgattaaa
    31921 ataagtgctg aaattaaagt ggtaaaaagg agtttttcta tgttttgatt gttggatgaa
    31981 aaaatatcta caagcaaaag caaaggaata acagctatat cctgaaaaag caaaattccc
    32041 aatgcttttc taccatattg ctcatttata tcgccattat catttaaaat tttaagcacc
    32101 actgcggttg aagaaagtgc tagtgcaaag cctactatgg tagcgctttt atctccaagt
    32161 cctaaaattc ctatagcaag tagcataaaa acaaagccac aagtaagcat ctgtaaagag
    32221 ccgtttaaaa aaacttcttg tttcattgcc attaaatgct taaaagaaaa ttcaagccct
    32281 atggtaaaca ttaaaaacac tataccaaat tcggctatat gggtgatttc gcctttgcca
    32341 cttaaatgat aaatttcaga aatgatttct ccagcagcta tatatccaat gatagttgga
    32401 atttcaaatt ttttaaatat gacatttaaa actatagcta tagcaacggt gattaaaaaa
    32461 atttctaaaa aattatccat tattttttat tttttctcat aaaaaatcaa atcaaagcta
    32521 tttttatgct taacaacggc tttactagcc gcttctttat cttgttgttt gcttaattct
    32581 aagcgtagtt catcaattaa attttcaaat tcgtgaagtt ggtttttcaa ttttaagata
    32641 acatctactc cagcaagatt gattcccatg tctcttgtta aacgcaatat aagtttaata
    32701 cggtcaatat ccctttgaga ataaagtctt atttttccat cggttctact tggctctatc
    32761 aatccttctc tttcgtattg ccttaaggtt tgtggatgta tgcttaaaac tttagccaca
    32821 acactgatta aatatacagg ttcatcataa tggtgttcca tattttattc ctttctttaa
    32881 ggtaattttt cttttaagag ttctataaat ttttcatcaa gagtatctaa atttggcaaa
    32941 acaacattta aaatcaaata catatcccca taaatatcac tttttctatt ttgcacccca
    33001 taacctttta aacgaatttt ttggttattt tttgaattag gcgttatgtt aattgtcgct
    33061 tcttccttac cttctttgag tgtttttata tttatttttc caccaaaaag tgcagttttt
    33121 aaagaaatat caaccttttg atataaatca tcatcttctc ttgtgtaaat aggactttct
    33181 tctattttta caataatgat taaatcgcct ctagctccat ttctgctttg ttttccttta
    33241 gagcgaattc ttagtttctc gccttctttt ataccgtgtg gaattttaaa tttaatggtt
    33301 tcgccttgaa aattaaaact atgttccccg cctttaacag ctttttcgaa aggaatgtga
    33361 agctctagat tgctgtctaa attttcttct tcaaaacctc caaatcctcc aaaaccactg
    33421 ctaaagcctt ttgaagaaaa gccgttaaaa ccccctcttg agcgtccacc aaagcctcct
    33481 ccaaagagat cttttaaaat atcgtctaaa tttaccccac cagcatttct tgaaaaatca
    33541 tgaaaacttt gtccaccaaa catagaatcg ccgtattggt catactgagc tcgttttttt
    33601 tcgtcactta aaatttcata agcagcatta atttctttaa atttttcttc tgcgcctttt
    33661 tctttgttga tatcaggatg atattttcta gctaggcgac ggtaagcttt ttttatttca
    33721 tctgcactag catttttgct aactccaaga gtttcgtata aactattcat gttatatttc
    33781 cttaaaaatt tttacttgat tatataaagg attaaattat aacataaact ttagcctaag
    33841 tcaatcaagt tttataaatt tttatcactc aaggttttat ttacaatttt gtaaattttc
    33901 ggttttatac tatgaagaca gtaaaatatt ttacgagata atttatcttt aagaacaaaa
    33961 ggaaatgaaa tgaaaaagat ttttttatca ttaagtttag caagtgcttt atttgctgca
    34021 agtattaatt ttaacgaatc gaccacaacg gctaatcgtg tgaatcctgc tgctggaaat
    34081 gcagtgcttt cttatcatga ttctattaaa gatgcaaaaa aatcagtggt taatatttcc
    34141 acctcaaaaa ctattacaag agcgaatcgt ccaagtcctt tggatgattt ctttaatgat
    34201 ccttatttta aacaattttt tgattttgat tttcctcaaa gaaaaggaaa aaatgataaa
    34261 gaagtggtga gttctttggg atcaggggtg attatttcaa aagatggtta tatagtaaca
    34321 aataatcacg ttgtagatga tgctgatacg attacagtga atttaccagg aagcgataca
    34381 gaatataaag caaaacttat aggtaaagat ccaaaaacag atttggctgt tataaaaata
    34441 gaggctaata atctttcagc tattactttt acaaattctg atgatttaat ggaaggagat
    34501 gttgtttttg cacttggaaa tccttttgga gtcggtttta gtgttacaag tgggataata
    34561 tctgctttaa acaaagacaa tataggttta aatcaatatg aaaattttat acaaacagat
    34621 gcttctatca atccaggaaa ttcaggtgga gctttggtgg atagtcgtgg atatttagta
    34681 ggtattaatt cagctattct ttctcgtggc ggtggaaata acggcatagg ttttgctata
    34741 ccttcaaata tggttaaaga tatagctaaa aaacttattg aaaaaggcaa gattgataga
    34801 ggatttttag gtgtgactat ttcagctttg caaggtgata ctaaaaaagc ttacaaaaat
    34861 caagaaggag ctttaattac tgatgttcaa aaaggttcaa gtgctgatga agcagggctt
    34921 aagcgtggag atttagttgc taaagttaat gataagatta taaaaagtcc tattgatctt
    34981 aaaaattata taggaacttt agagattggt caaaaaattt cattaagtta cgaaagagat
    35041 ggagaaaata agcaagcaag ttttattctt aaaggtgaaa aagaaaatcc taaaggcgca
    35101 caaagtgatc tgattgatgg tttgagtttg agaaatttag atccaagact taaggatcgt
    35161 ttgcaaattc caaaagatgt taatggtgtt ttggttgata gtgttaaaga aaagagcaaa
    35221 ggaaaaaatt ctggtttcca agagggtgat attatcatag gtgttggaca aagcgaaatt
    35281 aaaaatttaa aagatttaga acaagcttta aaacaagtta ataaaaaaga atttaccaaa
    35341 gtttgggtat atcgcaatgg ttttgcgact ttgcttgtgc ttaaataaaa ataacggaag
    35401 gattttcctt tcgttataaa ttttagttta aaattaaaat taagtttaaa ataaaggaaa
    35461 actatgacaa atattcttat gatagaagac gatttagaat tagcagaaat tacagctgaa
    35521 tatttggaaa aatttgatat gaaagttgat atagctcatg agccttatat aggcctttct
    35581 aagctcgcat taaaagagta tcagcttatc attttagacc tttctttgcc aggacttgat
    35641 gggcttgaag tgtgtgaaga gattcgtaaa aagtatgata cgcctattat tatttcaagt
    35701 gcaagacatg atattacaga taaggttaat gctttagagc ttggagcaga tgattaccta
    35761 ccaaaacctt ataatccaaa agaattacaa gcacgtatta aaagtcattt aagacgtatt
    35821 tcaaatacaa aaagcgccat agcaaaaagt gtaaaagatc ttgtttatga tcaatataag
    35881 catattatta ccatgaaagg acaagagctt actttaacta atgctgaatt tgatatttta
    35941 agctatttga ttaaaaaaga gggtggagtg gtaagtcgtg aagagcttgt ttataattgt
    36001 tcttctatta gtgaggattc tagtaataaa agtatagacg ttattatcag tagaattcgt
    36061 caaaagatgg gagatgatcc aaaaactcca aaatatattc actctatacg tggaataggt
    36121 tataagctta ctcaatgaat aaatcttcga ttttttatac tataactttt atttttattt
    36181 ttgctggggt tagtgttata cttggctttt tgtggcttat agaatacgat cagcaaaatt
    36241 atactagaga attaaataca aaatattctt tgatagctaa tgcaaggctc ttaaattttg
    36301 caggagttat cagcgaaaaa gaatttgaag agcagacaaa aaattataat aaaatggatg
    36361 agataacaga agcaaagcag atccgtaaaa ttctttttag aggtgatgtt ttagctaggg
    36421 ttgaggttaa taatggctta atcgagatta tttcttataa tagacaggtg tatttaaata
    36481 ttatttatga tggaaaggtt tatctttata aggatcaaga ttatcaaacc tataggtatt
    36541 ttattatcaa agctatagct gtagctgtga tttgtattct tgtattgctt tatatttata
    36601 tatttaaaaa attaaaacca cttaaaagac ttaaaaaaca aattgataaa tttgcccaag
    36661 gaaagcttaa cgatatagaa gatgtaagca ctggggtgga tgaaatttca caagtaagtg
    36721 aagcttttta tcaagccatt gttcaaattc gaaagctaaa ccaatctcgt cagttttttt
    36781 taagaaatat tatgcatgaa ctcaaaactc ctattactaa ggggctttta actttagaaa
    36841 tgatagaaga taataaatat aaagagcgct taaatggggt ttttactaga cttgaaattt
    36901 taattaatga atttgctgct attgagcaaa ttacttcagg ggctgctttt ataaatagaa
    36961 aaaaatacaa tattttagat gttttagatg aagccaaaga aattgcaatg cgagatgata
    37021 gcaatatacg tatttttatg gaagaaagtt tttttgtaaa tgtggatttt aaacttttta
    37081 ctacggcgat taaaaatatg atagataatg gtattaaaca ttctgaagat gggtttgtgc
    37141 aaattgatat tatagatgat tatatttgtt ttaaaaatcg tggtcctgag cttaacaata
    37201 ctttagaata ctatactcaa gcttttactc aaggatcaaa acaaaaatca agttttggat
    37261 tagggcttta tattgtaaat actattttag aaacacatgg aatgaagctt gattatttat
    37321 atgaagatgg ggtaaatttg ttttatttta gaaatttaaa aagtgttatt gttaaggagt
    37381 aaattaattt ttttacataa aaaatgtatt tttgtgtaaa aacccttgac aaagtttttt
    37441 aatttcacta taatcacatt ttacttttaa atattccgga ttagctcagc ggtagagtag
    37501 tcggctgtta accgattggt cgtaggttcg aatcctacat ccggagccac ttttttaact
    37561 ccatttttaa tattcataaa tgtattttaa tataaaaaat taataagtct ttatcacaaa
    37621 aaattgtgat aaagtttttt attttgtttg tttaagattt ttgacaattt tatctatttt
    37681 tttacttgcc ttttgataat ccccatcttt aagttcttct aaagcttcaa tagcaaaatc
    37741 aaaatcacca agttcgttat cgttagaatc ttcttggaga tttttgacaa ttttatctat
    37801 ttttttactt gccttttgat aatccccatc tttaagttct tctagggcat taacagcaaa
    37861 agaaaaatct tcaacttcat taagataagc ctctatggct tcttttacta tggctgattt
    37921 tggtttagaa agatttttac ttaaattatc caaacgctcc ttaagctcta aaggcattct
    37981 aaaagaataa gtttttacat tgcgtttcat tttatcctcc ttaagaatgt tttttgtaaa
    38041 attttatagc ttgtttacaa gttttacaag taaatttatg accttgtaat tctatttttt
    38101 gatgaatgct ataaggaaca tcgtgaattt taccaggaca attacaggta taaagataaa
    38161 attgtggatg ctcattatct tcatcttctg ctgcttcaaa gctaacatca ccaccatcat
    38221 ctgtagacaa agaagaactt ctccattttt caactttcat gtcttcatat agtatatgtt
    38281 ctaaaagcca ctttttagcc actatataaa gtttttcttt aagatcattg gttgatttga
    38341 tatctttgat caagttgatc atggtttgga tgatttcttt atgtattttt cgatgttctt
    38401 ctaaatttgg atagcctatt agctgcatgt atttttcttc atcattaaag tgatctttca
    38461 tataattaaa aaattcagcc aaaagttctt tgacttcatt tttacttaca gatctatctg
    38521 atacaacttc aacttttgca gcaagttcaa aaagcttttt atgttgctca tcaattttag
    38581 cattgtgcac actatagctg ttatcccatt ttggaagcat tttaactcct taaggaaaaa
    38641 tttatttgta taaaaggatt atagataaaa ataaattaaa taaaaatgaa attttattaa
    38701 ataattgata agaattttga tacaatgata tatatttaag agatttgaag ttagaaagat
    38761 ttaaattatg gctgctaaaa ttttactttt agaagatgat ttgagcttga gtgagatcat
    38821 tgaagagttt ttaaacgatg aaggatatga agtattttta tgcgataatg cacaagaagc
    38881 tttagatatg gcttatgaaa gatattttga tctttggatt ttagatgtaa aagttccttt
    38941 aggagatgga ttttcattac ttaaagaatt aagaaaaagc ggaaagcaaa ctccagcaat
    39001 tttcatgact tctttaaaca caacaaacga tttaaaacaa ggctttgacg caggttgtga
    39061 tgattatata aaaaaacctt ttgaacttgc cgagttatct atcagggtta aagctttgct
    39121 taaaagagct ttttcacata aaaatgaaga ttttgaagat ttaggagatg gatttagatt
    39181 tgaatttact acacaaattc tttaccataa taataaagcc ttgactttac cgagtaaaga
    39241 aattaagctt ttgtctttat tacttaaaaa taaaaacaac tttttaagca cagagagaat
    39301 ttttgaagaa ctctgggatt atgatgagga gcctagtgag ctaagtttaa gagcttatgt
    39361 aaaaaattta cgtaaaattt taggaaaaga aaaaattata aatcaaagag gcaggggata
    39421 ttgctatggc taaaaaagtc attaggcaaa ttttattaat ctacttaaca actacaggta
    39481 tttttttaac tatttttttt gcattatggt atcaaaaatt atatgaagaa ttagttgttt
    39541 taaagggtgc cactttgaga gaaaatcata gaaatattgt tataagcatc ttaaattctc
    39601 gttttacccc tatagatata agtgcaaaaa atattgctca aagcacagcg ctaaaatttg
    39661 ctatatttga tgctaaaaag attgttttta gtaatataga ttttgattta agaaaagcaa
    39721 agatagagct taaaggtaga ggtatttgtg ataataaggt ttttttcctt gctcctatga
    39781 gtgcagatca ttatttttta agacatgcta gcaatgaaga agtaaatact aacgatggtt
    39841 tgcaaatttt aatacagggt gaagatgtta gcaaagatct tttttggatt agaacgaaag
    39901 tttttggttt tgctattatg gctttttgca tattgggttt aatatcttat attttagtaa
    39961 aaattgctct aaagcctttg gaggataaaa tcagcacact aaatcgtttt attaaagatt
    40021 caactcatga actcaatacc ccattaagtg ttattttgat gagtatagaa caacttgagc
    40081 atcaaaattt aggagataat gctaaattta caaggattaa gcttgctgca aaaagtttgt
    40141 ctcaagtgta ttctgatctt gttttttata atttccctaa tactttagaa acagaaaaac
    40201 aaaaatttga tttaagaata ctacttgaag aaagattgga atattttaaa gtattttttg
    40261 agcaaaaaaa aattacacta aagcttgatt taaatcaagc aaatattttt gctcctaaaa
    40321 gtcaaatttc taaattgatt gataatctta taagcaatgc tattaaatac aataaaaaag
    40381 gtggagtaat ttctataatt ttaaaagcca attttttaag tattgcggat acaggttgtg
    40441 gaatttcaaa gtcaaattta aatcatattt ttgataggta tacaagattt aatactgatc
    40501 aaggaggatt tggtataggg ctttctttgg taaaaaaagt ttgtgatgat aatgatatta
    40561 agattatttg cgaatctgta gaaaatcaag ggagtgtttt taaattaaat tggtaatcag
    40621 caaggaaaat ccttgctgat aagaggttgg agcagatatt acatcattcc gcccatgcca
    40681 cccattcctc ccataccgct catatctggc atagcaggtt tatcttcttt aatttcacta
    40741 attgttgctt ctgtggttaa aagcatacta gctacagaaa ctgcattgag taaagctact
    40801 ctttctactt taacaggatc gataattcca ctttcaagca tattaacata ttcacctttt
    40861 gcagcatcaa agcctgtatt ttcatcttta gcattttcta cgctatttac aaccacacct
    40921 gcatcaaagc ctgcattttc agcaatttgt cttaaaggtg ctcttaaagc tctttcaacg
    40981 atagctgcac cgattgcttc atcgccttgt agatcaagtt tgattttagc ttttgctttg
    41041 ataagcgctg caccaccacc aattactata ccttcttcaa ctgctgcttt agtagcactt
    41101 aaagcatcat caacgcgatc ttttttctct ttcatttcag tttcagttgc tgcacctact
    41161 ttaataactg caacaccgcc acttaatttt gcaagtcttt cttgtaattt ttctctatca
    41221 taatctgaag ttgtttcagc aatttgtgct ttgatttggt ttactcttgc atcgatattt
    41281 gctttttcac ctgcgccatt tactatggtt gtattgtctt tatcgatgat tacgctagaa
    41341 gcttgtccaa gatcttgtat ggtcgcactt tcaagagttc ttccaagttc ttcagaaatc
    41401 acttctccgc ctgttaaaat cgctatatct tcaagcatag cttttcttct atcgccaaaa
    41461 cctggagctt ttactgctga aatattaaga acaccgcgaa gtttatttac aaccaaagtt
    41521 gcaagtgctt caccttcaat atcttcagcg ataattaaaa gtggtttgcc tgttttttga
    41581 atttgttcta aaaccggtaa taaatctttt aaatttgcaa tttttttatc aaaaagcaag
    41641 atataagggc ttgaaagctc tactgtcatt ttttctgcat tagtgataaa ataagggctt
    41701 aaataacctc tatcaaattg cataccttca actacattta attcatcatt gattgatttt
    41761 gcctcttcaa cagtgataac accatctttg cccacttttt ccatagcatc agcgattaaa
    41821 tttccgattt tttcatcaga attggctgag attgtagcaa cttgtgcaat ttctttttta
    41881 tcttttactt cgcgagaaag ttttttaagt tctgctacta tagcttcgca agctttatcc
    41941 ataccgcgtt ttacttcaat aggatttgca cctgctgtga tatttcttaa accttctttg
    42001 aaaattgcat gagctaaaac cgttgcagta gttgttccat cgcctgcttg atcagctgtt
    42061 ttactcgcta cttctcttac aagtgaagcg cccatatttt caagactatc tttaagctct
    42121 acttctttag caacacttac gccatcttta gtaatgcttg gagcaccaaa gcttttttgg
    42181 attaaaacat tgcgtcctct tggccccata gttactttta ccgcgtcatt aagtttttta
    42241 acgccctcat aaagtttatt tcttgcttca tctgaaaaaa taatttcttt tgccattttt
    42301 tatccttttt tataaattat tttaaaattc ctaagatatc atctaaattt aaaactaaat
    42361 attcattatt atcaagttta atttctgttc caccgtattt agcaaacacg attttatcac
    42421 catttgcaat atcagtgatt tctttactta ctgctactac ttcacccatt aaaggctttt
    42481 ctttagcatt atctggtata attatgcctg aggctgttgt tttagtttct tctacgcgtt
    42541 taactagaac acgctttcct aaaggttgaa aattcatttt tgtccatcct taaaaatatt
    42601 gattttagca ctcttttatt tagagtgata atatcatact ataaaaaatg aattttgtca
    42661 atactttaaa ttaaaatatt tataaaagtt tagttttata gactaaagtt attttataaa
    42721 ataaactaaa ggataaaaat gaaaaagatt ttttatggag ttatagcttt tgttgttgtg
    42781 cttttaattg ctatttatac catacttttc acaagttttg gtaataatat agtggcaaat
    42841 atagcgcaaa aaaagatcaa agaaagtgcg ggattagatg taaatatcac gcattttaat
    42901 ttacgttttt caagtcttga attgcaagca aatatcgcaa atatggcaga ttttaatctt
    42961 aagggagctt tgagtccttt taagcttgga tttgatcttg actatcttat ttctttaaat
    43021 caaaattatg ctaaaaattt aggtttaaat ttaaatcaaa acctttcttt tgtcggtaag
    43081 attcaaggta aagcaagtga ttttacttta gatggaaagg gttatttgtt aggttcaaat
    43141 gtacttttaa atgcaagaat gtataattat agccctattg ctttaaattt agatgcgcaa
    43201 aatcttaaga tagaagaaat acttcatctt ttatcttacc ctagttacgc taaaggtttt
    43261 ttaaatgctc aagcaaaaat ttcagcacag aatttaaaac ctgatgggaa tatcatcata
    43321 aaacttgata caaattatat aaactatgag gcgataaaaa aagatttttc tttagacttg
    43381 cctttaaatt ctaatcctaa agcagaaatt ttggccaatg ttaaagaaga taagatttat
    43441 gctgtaagta aaatttacaa tgattatctt aacttacaaa cccaaaaaac tctttatgat
    43501 attagcaaga atgctttaag tactgatttt aatttaagta ttccttctct tgtaaagctt
    43561 gaaacactta caaaaactag actaaatggt aatttgggtg tgataggtca aacaagtgtt
    43621 gtaaataatg ccttatcaag tttaaatgct caagttatcg gacttggtgg agaggtaaag
    43681 gcaagtttga aaaataataa aatttttgca gatattaatg aagcaagttt ggaaaaatta
    43741 ttagctcttg caggatatgg agctttggtt tctggaaatt taaatgctaa acttctaaat
    43801 gcagatttgg atttttctaa ttttgatctt gaagcaaaaa taaacaatgc aaaacttaac
    43861 accaatgagc ttaaaaaaat agctaaaata gagcttccaa atacaatttt tagttttgac
    43921 gctaaagcaa atgcaaaaaa tagcaatatt gcttacaatg ctttgcttgc ttcaaatttg
    43981 cttaatatca aaaaacttca aggaagttat aatttaaaaa atagtgagtt aaatacagat
    44041 ttaaatgctt ttatcgatga tttatctcag tttagtgcta tagcaggaca aaaattacaa
    44101 ggcaaggcag atcttgctgc aaaagctcat attataggca ctcaaataca aaatttaaat
    44161 gcaaatgcaa atttggcaga tggtgtaatc aaggctgatt caaatggtaa aaaacttgat
    44221 ttaaacattg ataaacttga tttatctaaa ctttttgtta tagcaggtat gccaaattat
    44281 gccagtggga ttgttaatgc aaaaattaat ttagataata tcgattttaa caaccttaat
    44341 ggtaaagcaa atttagaagc taaaggtatt ttaaatgcta caactttaag taaaatttta
    44401 aataaaaatt ttccaaacaa tacaagttat gatttaaata ccaaaattaa ttttaaaaac
    44461 aatatcgctc aatttgattc tgttttaaat tcatctttag ctgatcttac aaagctacaa
    44521 ggaagttttg acataagcaa aatgctttta aattcggatt ttaatctaaa gataaatgat
    44581 ttttcaaaac taggcttttt gttggataga aaacttaaag gtaaggcaga atttaatgga
    44641 aaggtaggtt ttgataagag tttaaatttt gttgtaaata gtccaaattt atttgaaggg
    44701 aggcttcaaa gcacacttaa agataacctt ttgcttgctg atttaaatgg agtggattta
    44761 agtagtctag ctcaaggttt agattttatg gatgtttatc aaggtaaggc agatgtgaag
    44821 gcaaattaca atcttttaag tgaagaagga gaggttaatt tggatatgaa agagggtaaa
    44881 ttaaaaccaa atcttattac caatgcttta aaaattttaa cactaaaaga tattaccaat
    44941 gatgtttatc gcactgctaa tgctaaagct ttgattaaaa aagaaaatat caaacttgat
    45001 cttaatatgc aagcagatcg ttcttatatt ttagtacaat caggagcttt aaattctaaa
    45061 agcggagctt taaatttgcc ttttgatatt aaactcgata gagccaattt taaaggaagt
    45121 attacaggaa ctacggaaaa tcctaaagtg aatttaaatg caggaagtgt gttaaattct
    45181 attaaaaatg tagtaggtgg cggtgtgagt gatggtgcta aaagtacggg cgataaagtt
    45241 gataaagcgg tgaataaatt attaaataag attttttaag gtaaaaaatg tttaatggac
    45301 tcataagaga aattgctaaa gttcaatctt atcaaaacaa tactttaagc ttaaaagcaa
    45361 aatatcgccc aaatcttggc gatagcatag ccgtaaatgg agcttgttta agtgtaacaa
    45421 aactttatga agggggtttt gaagtggagc tttctcgtga aagtcgcact catatagcta
    45481 tagagaattt aaaagataaa gttcatatag aacctgcttt aagatatggc gatagaattg
    45541 atgggcatct tatgcaagga catattgatt ttatcggcac acttgaaaag attcaaaaag
    45601 atgaaaatgg agtggatttt tatatatctt tacctaaaga agctatgaaa tttatggcag
    45661 aaaaaggaag tatagctgtt gatggagtaa gtcttactat caatgaaatt ttaaaaaatg
    45721 gtattaggct tactattatt cctattactt ttaaagaaac gctttttaaa gactatcaag
    45781 taggtagaaa aataaatata gaaagtgatt tacttgctcg ttatatttat gcacaattgc
    45841 aaggtaaaaa caaaggatta tcatgggaag aagtcgaaag aatttcttat ctttattaga
    45901 aaatgataaa gtcgttattt tttgtgcttt tgataaggat tataatgttt ttagagctaa
    45961 ggtttatagt gagaatttat tttatcattt aggttttaaa gatattaaaa aatgtgtttt
    46021 tatggatcaa attcactctc ataaagttat catttatgaa aaaaatttaa aaaatcttag
    46081 ctgtgatggg cttataagta aagaaaaaaa tatcgctctt tgtgttttaa gtgcggattg
    46141 tctgcctttg atcttatatc atgaaagcgg cattatagca gctttgcatt caggtagaaa
    46201 aggaagcttt gaaaatatcc taaaagaatg cgttgatcaa attactatgc aaaattcaca
    46261 tttagataag aataaatttc atctttttat cctgcctgga atttgtgcta aaaattatga
    46321 aatagatgga gaaattttag aatttgctaa aaaagaattt aaagaatttg ttcaagatga
    46381 taaacttgat ttaaaagctt tagtaaaatt tcaagctcaa aatttaggca ttgaaaatat
    46441 taaagattgt ggaatttgta gttttgatga tgagagtttt ttttcttatc gtcgtgataa
    46501 aacgcctaag cgttttgtga gtgtggttta tttaaaggat taaaatgtat gaaagaaaag
    46561 atttaagagt gttaaaaatc attcaaaaag ctagagaatt tggcgatgga gatttgttaa
    46621 atgaagcttt ggtaaaacaa ttgattgatg cagatttttg tgaaattaat gaaaaagaaa
    46681 aagaagagct tgcaactctt ctaaattctt taatcaatgc aaaagataaa gcgttgttga
    46741 gtaattaaaa ttctatatag ttttcaaaat cttcttcttt tggaggatta ggttgattcg
    46801 aggctagggc ttctttaaca acctgctcgt atccagctat gatatgttta aaattctctt
    46861 ttgcttttcc actaagttct gatttggcga tttttacaac agatgcagga tttatagctt
    46921 tattatttaa atatactcca aaatgcaaat gaggacctgt gctcatacct gttgaaccaa
    46981 catatgcaat tacttgtcct tgatttacct tttgtccgtt tttaattttt gcaaaacgac
    47041 taagatgagc atataaagtc atataacctg agtcatgctt gatttgaatt acatttccat
    47101 aaccaccttt tgtgcctata aaggttacta ctcctttgcc agcacttttt acaggagttc
    47161 cagtaggtgc agcatagtct ataccaagat gggcgcgata gcgttttaat ataggatgat
    47221 atcttgctgt tgtaaaagga gaggaaattc tagtgtagtt cacaggtttt gtaagtaaaa
    47281 aagattctaa ttctttgcca tcgcgatcat agaatatatc attataagaa aagacttctc
    47341 tagcgctttt attaatttct accattgcca tttttatatt tatatcgccc caaagtttac
    47401 ccatgcgtct tttttgttca taatataggg ttacttcatc acctttttgg atattgcgaa
    47461 aatttatact tcctcgaaaa gcacgaacca tagcacgagc taaagtactg ctaccacttt
    47521 cttcatagac atcttgataa gcagagcttt taatggttaa atgtaaaatt ctatcttctt
    47581 tttgataaga tacaggagta aaagcaagag tgtattgtcc atctttatct ttatagatat
    47641 gaatttgtaa atcatcacta attggaatta aaacttgttc tatgttgttg ttttcatctt
    47701 ttaaaacttg atattttatt ttataggcta tatcagaagc aagttcttga tcttctctat
    47761 caagtccata ataaagcgac ataggtatgg aatttctttg taagaattta agcaaggtat
    47821 ctccattatc ccaagttagc tcttcaacac ttaaagctgc aaaactttga acaacaaaaa
    47881 taaataaaag caataatttt ttcatgagat aaccttaatt tttaaaagaa ttttgaaatt
    47941 tgaaagctat attttacttt atttttctta caattgctta acaaaaaagg attataattc
    48001 tataaatttt tatttaagga gcaaatttgt ttaaaactat agtgtgtttt ttagctttaa
    48061 accttagcct ctttgcggtt ggatttgatt taaaacctat aaaaagtgaa cttgtaaaag
    48121 ttgatgatat ttatggttat attaaagata gtgatgatat aaaactttat tcaagtggcg
    48181 tagtagtgca acattttagc aattcgcaaa gtatcatcgc tagagcaagt gttatagata
    48241 aaaaaaatgg tttggcaaaa ttagaattta gtgttttttc agctcttaag caagatgctt
    48301 tgcctttacc aaatgtttta cctaaagtag gtgatgaggt tgttttaaat tttctttatg
    48361 atagaggatt ggtaattgct cctgatgaac aaacttataa tgaacttgtt agagaatttc
    48421 cgcagatata ttttacccat attgacattt ttggagcaca attaattaga acggccactc
    48481 tttctcctaa gcgttcagat tttaggcaat tttgtgatga taatgcggtt ggcattttgg
    48541 ttgtggcttt ggaaaatcag gcagaagttg tggattgtca agattttaat aagctttatg
    48601 aagtgcctat aagcaagcca actagcgttc aggttccttt ttattctcgt ataggtggat
    48661 ataaaagtaa tttttttgat tttaactctc aagaaatagg gaattattat agatattatg
    48721 atgctttgat taatcttcct aaggtgcaat aaacatgaaa aaagaatttg aacaatattt
    48781 taaacgattt ttaggagaag aaaacgctta ttttgatgaa attcacaaaa gagcttatag
    48841 ctatgatgcg acaaaaaaac attatttacc cgatggggtt ctttttccaa gaaatgaaga
    48901 agatattgct caaattttaa aattttgcaa tgaaaataat atcatagtca taccacgagg
    48961 ctcaggatct ggttttacag gaggagcttt agctgttaat ggcggtgtgg tgcttgcttt
    49021 tgaaaagcat atgaataaaa ttttggaaat tgatcttgaa aatttagtgg ctgttgtgca
    49081 acctggggtt attaatatac atttacaaaa agaagtggct aaatacggac ttttttatcc
    49141 gcctgaccct gctagcatgg agtattctag cttagggggt aatgtaagcg aaaatgctgg
    49201 gggaatgaga gctgcaaaat atggcattac aaaagattat gtgatggctt taagggctgt
    49261 tttgtctagc ggagaaatca ttcgtgcagg aaaacgcact attaaagatg tagcaggtta
    49321 taatttggca ggaattttaa tcgctagtga aggttctttg gcagttttaa gtgagcttac
    49381 tttaaaatta atacctttac ctaaattcaa aaaaactgct tttgctattt ttccaagtgt
    49441 aaaaagtgct atgaatgcgg tttataaaag tcttgctagt ggcgtaaatc ctgtgtctat
    49501 ggaattttta gataatctta gcattagagc ggttgagagt aaatttaaca aaggtttgcc
    49561 tatagaagct ggagctattt tgattgctga tgtggatggt aatgttagag aggctattga
    49621 tgaggattta agaaatttag aacattattt tttagaagct ggagctagtg aatttaaaat
    49681 agcaaaagat gaacaagaaa ccgcagatat ttggtttgct agaagaaatt gttctcaaag
    49741 cattgccatg tatggaactt taaaacttaa tgaagatatt acagttccgc gttctaaact
    49801 acctgctttg cttgaaggta tagatgagat ttctaaaaaa tatggtttta aaattccttg
    49861 ttttggacat acaggggatg gaaatgtgca tactaatgtt atggttcctg ataaaaatga
    49921 taaagagcag gtgaaaaaag gctatgaagc tgtggaagaa atttttaaat taacagtgaa
    49981 acttggagga actttaagcg gagagcatgg tatcggactc tctaaagcac cttttatgaa
    50041 tttagctttt tctgaagccg aaatgaattt aatgagaaat attaaaaaag cttttgatcc
    50101 aaataatata ctaaatcctt ttaaaatggg actttagaag gtgaaaaatt tttttactat
    50161 tttgctaaat ttgcgtgata aggaaatttt aaattatgca gcagcgctta gtttttatac
    50221 tgtattatct ttaataccta ttttatttgt atgtttttct gtttttacgc aaatttctag
    50281 ttttaaagct tattatgaaa aagcaaagca agtaattttt gcttttttaa taccaacgca
    50341 acaagatgtt gttgctacct acatcgatac ttttttaaaa aatagtgtaa atttgggtat
    50401 tgtaggtctt attgctatgg catttacttc tttagctttt ttttcaggct atgattttgt
    50461 aatcaatcgt attactaaaa atgaacctaa aggactttgg caaagcatta gttcttattg
    50521 gactctttta actcttgttc ctttggggct tgggcttagt ttttatattt caggttttat
    50581 ccaacaaact ttagatgatt ataaaatagg gtttaatttt tttgaaattt taccctttgt
    50641 aattatttgg ggtttatttt ttatatctta ttcaagttct gttcataagg gaactcttaa
    50701 aagtttagct ttagtatctt ttggagcggg tgctatttgg tatataggaa aaaatttatt
    50761 tgtatattat gtggtatata ataaaacata cgctagtgtt tatggatctt tttctactat
    50821 tttattcttt tttatttgga tttatatttc ttggattatt tatctttttg ggcttaaact
    50881 ctattatttt ctaaattaca atcataatga agggaataaa attcgcaaaa atacaaagaa
    50941 aagctagata tttaaatcgt acagagatta aagaagcaat aagataactt ataaaaatcc
    51001 aaaatgggat atagatatta gttcc
//
LOCUS       DAPWGO010000003        47512 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.003, whole genome shotgun sequence.
ACCESSION   DAPWGO010000003 DAPWGO010000000
VERSION     DAPWGO010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 47512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47512
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.003"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            73..744
                     /locus_tag="RJ336_000111"
     CDS             73..744
                     /locus_tag="RJ336_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDZ5212595.1"
                     /translation="MINVLMIEDDPDFAQLLSEYLAQFNIKITNFENPKSALNVGIQG
                     YDCLILDLTLPGIDGLEVCREIRQKSNIPIIISSARGDLSDKVVGLQIGADDYLPKPY
                     DPKEMYARIMSLIRRTKRVEHTNNENINSAFKIDERRHEITYEDKVLTLTPAEFEILE
                     YLIQQHGYSVSREQLVSRCKNLKDKDSKSLDVIIGRLRVKIGDSSKSPKHIFSVRGIG
                     YKLIG"
     gene            741..1976
                     /locus_tag="RJ336_000112"
     CDS             741..1976
                     /locus_tag="RJ336_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDZ5212596.1"
                     /translation="MTKNYSIHTKLIILFVVTFFLVCVLFIVLLKIEGNAYNEEESLK
                     QENLIKNLLISYENTSGVEIGAYLGNSGFNAIQNPNLVKAIRNNGQSLFKAGGELCTL
                     SSLKYHSNLYFDVQCKDFDGLYEENTSDRVYNLLLIGFFSFSLLVVFMYFSVLRSLEP
                     LKKLRRQVAEVANGEQPDFLDYQEDEVGKIAFEFQKAFKKNQELIQSRQLFLRTIMHE
                     LKTPIGKGRIISEMIKEDRQKERLIAIFLRMDSLINEFAKIENLFSKNYNLHFKPSRF
                     SAILEEAKEHLMRDDFNKVVKVDIRYDALINVDMEIFSVILKNLIDNALKYSNNGTCE
                     LFCCKECFTIKNPGKPLAEPIEHYLEAFTREKHNQVKGMGLGLYIVSEVCKLHNFDLI
                     YFYDDGKHCFKIFFGDKEK"
     gene            1976..2548
                     /gene="recR"
                     /locus_tag="RJ336_000113"
     CDS             1976..2548
                     /gene="recR"
                     /locus_tag="RJ336_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDZ5212597.1"
                     /translation="MAKGLEKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKL
                     AHNIENAIRFIKPCGQCGALSENELCEICSDEERNKNILCIVESPKDILTLEESQSYN
                     GLYFVLDELNEEKLEKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFS
                     KIAQGIPSGVNLENVDLISLNKAMNFRTKI"
     gene            complement(2545..3081)
                     /locus_tag="RJ336_000114"
     CDS             complement(2545..3081)
                     /locus_tag="RJ336_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HDZ5212598.1"
                     /translation="MKFLVLGIGNIMFADEGLGVHLCKQLEKNYKFTHPEFTLDFIDG
                     GTLALQLSYIIARYDRLIVLDCIEAQDASIGDIFFFPYDAMPNKISWSGSAHEIEMLQ
                     TLQYMELAGDLPKTHILACVPKRIEAMSFKLSDELIQGAKIMEKTLLDFLTKEGFAYE
                     KIADFSLQELADISYKNY"
     gene            complement(3078..3770)
                     /gene="cybH"
                     /locus_tag="RJ336_000115"
     CDS             complement(3078..3770)
                     /gene="cybH"
                     /locus_tag="RJ336_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HDZ5212599.1"
                     /translation="MQNKEEKLQRKAEYEFSIGLRLTHWVRAIAIVILIGTGYYLSYV
                     FQSPISNGEPVNFMQAKYRLVHQAVGFVLIACIIFKVYLFFCDKVSAKERRSVWDIFN
                     IKLWIEQVKFYIFLGKHPHLKGVYNPLQFVTYFFFYLVMLGIILTGLILYTHTYHEGL
                     GGLLYHILRPLEAAMGGLADVRTYHRILMWVIMIFVPVHIYMAIFNAVKGKDGAMDAI
                     ISGYKYIKEEKH"
     gene            complement(3781..5496)
                     /locus_tag="RJ336_000116"
     CDS             complement(3781..5496)
                     /locus_tag="RJ336_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HDZ5212600.1"
                     /translation="MSQKIIVDPITRIEGHLRVEVVVDDNNVVKEAYAGSTLWRGIET
                     IVKGRDPRDAGFMTQRICGVCTFSHYKAGIVAVENALGITPPLNALLTRTLMNAALFL
                     HDHIVHFYQLHGLDWADVVSALSADVKKASDEAFKYTSNPYATGADKLLEVQQRLKTF
                     VDKGNLGPFANAYYGHPTYRLTPEQNLIVLSHYLECLRIQRIIAQCMAIFGAKNPHPQ
                     SLTVGGVTCVMDLLDPARMGEYMVKFQEVQDFVNRAYYPDLVMAGKAYAHEASVLNDI
                     GVNNLYTFKEFQIGRDEWLFESGIIKNGDLSKVYEVEEDKITEEATHSWYADNEPLHP
                     YDGKTNPNYTGLVDGESVDHHGNNVHSKVFDTKGKYSWIKAPRYEGNPMQVGPLANIV
                     VNYAKGNPNVVPVVDEFLKETGLPLNAVFSTLGRTAARCIEAKIVANNALKAFNNLVE
                     NLKVDQSTCAPYVIDNSKEYKGRYMGHVPRGTLSHWCRIKNGVIENWQAVVPSTWNAS
                     PKDANGIGGSYEQCLIGLKIADVKQPLEIIRKIHSYDPCIACAVHVMDAKGNNLSEYK
                     VNVNL"
     gene            complement(5499..6638)
                     /locus_tag="RJ336_000117"
     CDS             complement(5499..6638)
                     /locus_tag="RJ336_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HDZ5212601.1"
                     /translation="MIDYHQIESRLSALEKLPSLKDNDSITKALEKSGFSRRDFMKWA
                     GAMTAFLALPASFTPMVAKAAELADRLPVVWLHMAECTGCSESLLRSDTPTIDSLIFD
                     YISLEYHETVMAAAGWQAEENLESAIQKHKNKYILMVEGGIPMGDTEHFLTIGAHGKT
                     GYELSKMASENALAIFAIGTCSSFGGIQAARPNPSNAQPLSKVTSKTVINVPGCPPSE
                     KNIVGNVLHYLLFGELPALDVYNRPKWAYGLRIHDLCERRGHFDAGEFVHAFGDEGAK
                     QGFCLYKVGCKGPYTFNNCSRERFNQHTSWPIQAGHGCIGCSEPDFWDTMGPFEEPMA
                     SRKFDTVFGLGADSVSDKIGIGVLTLTGVAIAAHAVISSMQKDKE"
     gene            complement(6758..8599)
                     /gene="mnmC"
                     /locus_tag="RJ336_000118"
     CDS             complement(6758..8599)
                     /gene="mnmC"
                     /locus_tag="RJ336_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HDZ5212602.1"
                     /translation="MKKAKLIFKDNTPFSLDFDDFYFNSKDGLNESKFVYTHSFEWKN
                     QENFIIAESGFGIGLNFFLTLKRFLQTTPSKRPKKLFYISIEAFYIEKEQLREIYQKL
                     GFYEEFKELLEQFLKFYPKAKEGIYRFYFEDCFLDLVFEDITILKELDFKADIWYLDG
                     FSPNKNSQMFDENLIFEVARLSKKNTQICTFSSASFLQKNLKKYGFRVEKTKGFRKRE
                     MIKAYLENELEFKDKEAYFSRTFSSLKNKKVAIIGAGISSAVLAYELSLRGFEIDVFE
                     KHLELGKGASGNESGILSSLILKPKVNLGEFSELSFIEASRFYRQILDLEFKGVVEFA
                     HNDLMQERFDTQRENVLFKISKNQAFLEEGGVIFPKNLVKNLFEKSKACIYFNHEFQA
                     YKFENECFTLKFKNDIVKSDYAVLIYAMGADTKDFVFYDEMKLSKVRGQVTHLKPFLN
                     TPFPLSSKAYICPVKDDLQVIGASYDRLDASLESKEEDDKQNIENIAEFIDKNTKLEI
                     IGSKVGFRSYSSDRFMIVGNAYDEVFYKEEYKALLWTKNKEQKLAKISCNLYFNFAHG
                     SRGFSTSVLAARYLCALINNEPLYLEKKYIHAIHPARFLIRKLKKGL"
     gene            complement(8596..10575)
                     /locus_tag="RJ336_000119"
     CDS             complement(8596..10575)
                     /locus_tag="RJ336_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDZ5212603.1"
                     /translation="MAKIFVFLVFVFTTLFGAYENELANFDKNFIGSKSEVQVKFHHQ
                     LKSLYIQSVINEDEKTKIEILKRLIISSNTLNLDDKSYANELKESGISEASINALRKA
                     VIKDIKVQNISQDTEKSTFEPIKTVQKNEKKSSNEQIKNTEKTNSKTSQAPKSSIVSK
                     AKSDDKIYVLKSSKTNQGVEFELNADLDKDQLKSFALDEKGNYRFISDFEGVLEGGKK
                     EFKFDDYRLVISQFNPKTIRIVVYAKEKIPIDISFKEEKLIFSKETTSQKKTEQVSKI
                     SEKKQDQKTEIKTKALETKKQDKKTNNEKENQEPLYVLDVDKISNAVVLNLSDDLDEK
                     EIAVFDTKDQKFRYVVSFKGVLEGNRKSFTFGQNVITVTQYNPKTVRVVLSAPKEFKL
                     LKELDNKNLTLGFYAQTTNQNVNKKATQSSSKTLNTNYKSGKLVVIDAGHGGKDSGAL
                     SDKKGSLKEKDIVLSTALKLGNELKKRGYKVLYTRSSDKFINLRDRTKYANDKRADLF
                     ISIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDFEEINYFSKQSILN
                     FLNREKIVASNKLAIDVQKNILTQTRKKYKIVDGGVREAPFWVLVGAQMPAILIEIGY
                     ITHPNEGKRIANKAFQDLLVKGIADGVESYFYNNR"
     gene            complement(10575..11666)
                     /locus_tag="RJ336_000120"
     CDS             complement(10575..11666)
                     /locus_tag="RJ336_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDZ5212604.1"
                     /translation="MNLQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGII
                     SSVGTGYYEERKYASKELNAKPYGSENFYSRKGLQALINNARKVCGDAPLGCNILCAS
                     NDYARIARDACEVGFNVIVSGAGLPTNLPEFTADFPDVALVPIISSAKALKIICKRWQ
                     SRYNRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAG
                     GIWDKKDIENAISLGASGVQMGTRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGY
                     PARGVRTNLLNLVDKRIGPKINCISNCVAPCGRGKEATKVGYCIADRLFDAWSGKKET
                     GLFFTGANGYRLDKLISVKELMEKLVNGE"
     gene            complement(11663..12868)
                     /locus_tag="RJ336_000121"
     CDS             complement(11663..12868)
                     /locus_tag="RJ336_000121"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDZ5212605.1"
                     /translation="MDIKKILAEVKRGCAELIDEERIENLIKNYYEKGENFFIKAGFD
                     PTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLI
                     NAKTYETQVFKVLDKEKTQIKFNSTWLNELGAAGIVELTSTFSVARMLERDDFTKRFK
                     EQSPISICEFLYPLLQGYDSVALKSDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIM
                     MPLLEGLDGVNKMSKSLNNYIGVTEKANDMYAKILSISDELMFRYYELLSQKSLEEIA
                     QIKKDIEQGNLHPKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFE
                     IQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLEQGEYILQIGKR
                     KFAKLKVKE"
     gene            complement(12880..15075)
                     /locus_tag="RJ336_000122"
     CDS             complement(12880..15075)
                     /locus_tag="RJ336_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HDZ5212606.1"
                     /translation="MKPIDEELLLEQLIDNVKNCKDLEAAKALLFEICGHDAILEKAV
                     DYCIFCHEGQFRKSGEPYAVHPILVATLVGFLSENKSNILAALLHDVIEDTNCTEEEL
                     REQFGSEVLKLVLGLTKIIEIREDNLISSKSKKSLTKSALTFRNMLLASIEDVGVLIV
                     KLCDRLHNMLTLDILREDKQKRISEETLVVYAPIAHRLGISSIKNYLEDLSFKYLMPD
                     EYKLIDNYINSNNQEMQLGLNEFISKIELLFLSNGFRQGSFEIQKRIKHSYSIYLKMQ
                     RKGIGIEEVLDLLGVRILVEKVSDCYLALGILHTHFNPLVSRFKDYIALPKQNGYQTI
                     HTTLFDAKSIIEAQIRTFDMHKIAEFGIAAHWKYKEDGSVVAPRLDWLTDISMQSINN
                     LENAEDYNAIELYEYAKDSLYVEDVAVYSPKGEIFTLPRGATVLDFAYEVHTKVGLHA
                     KSAYVNRIKVPLLTELKNGDIVRVVTSNDKFYRCSWIDSVKTGKAKASIREFCKQKIR
                     EINLASSINMLSFIFGVDKNRIETWIEKENLARRIRQVATDSAYLKDIVNGLKKYAKK
                     SYWFDKYEIKEQKIGNFTLYCNHKIANVDFDFCCHPKRGDAVLAFVKGGNAIVHHKLC
                     DRADKMIDNNQDMVFIKWDSNIPKSYKLIFSLENKKGVLAEFLAFLAKMQINLLTINL
                     SSDLNSAVDYFEITMEIPDNINPDSVKDRLKSRCKILDFTSLNDAYKEG"
     gene            complement(15059..15283)
                     /locus_tag="RJ336_000123"
     CDS             complement(15059..15283)
                     /locus_tag="RJ336_000123"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDZ5212607.1"
                     /translation="MDKRIEEVAAKALEKMGNDRYRLSLVVAKRAEQLANGATPLVDF
                     DKNKNKLADIALYEIAENKITLEGLVETNR"
     gene            complement(15294..16013)
                     /locus_tag="RJ336_000124"
     CDS             complement(15294..16013)
                     /locus_tag="RJ336_000124"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDZ5212608.1"
                     /translation="MQERKRVLVKFSGEALAGENGFGIENSILKFIASEIKELIKNQI
                     EVGIVIGGGNIIRGVSAAKGGLIKRTSGDHMGMLATVINAIAIQEALESSGLEVRVQS
                     AIQMEAFCETYIMRRAQRHLEKGRVVVFAAGTGNPYFTTDTTAILRAVEIDADMVIKA
                     TKVNGVYDKDPKQFDDAVFLNTLSYDEAMQDNIKVMDDTAIALAKDNKLPIVVCNMFE
                     EGNLLKIIQGDTSLCSIVKNN"
     gene            complement(16065..17258)
                     /locus_tag="RJ336_000125"
     CDS             complement(16065..17258)
                     /locus_tag="RJ336_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDZ5212609.1"
                     /translation="MRKNILIFFCFFLFVDISLANAINEKTKSLEENKRIQEQLNKKL
                     EDLASDILNGEKSLKDLSLQIESLNSQTSKLEASAKAQNQELNTLTSQNEDLLKSKSN
                     MEGKLISLMAKDFAYDLPIPQGYIESEESFMAFEILGSLNKVLNEEIFKISKDYEGVS
                     RLIDDKQAQINKINESLKDYNAQLAKLQSLKQKQISEINKQKTDRAIYAKKLDDLQAQ
                     QEELRKTLNQLKIINDKEDANSNKNDTKIVKNNQKIRQLGSSYQGSSVKRYTGKKTIA
                     PLDSFTVKQKFGNYVDPVYNLKIFNENVVLRSNKSDAVVKNVLDGKIVFAKDTSMLAR
                     VVIVEHDNGIHTIYAHLDKIAPNIKVGKNIKKGAVVGRIKNDLTFEVTQKNFHINPLE
                     LISLN"
     gene            complement(17255..18061)
                     /locus_tag="RJ336_000126"
     CDS             complement(17255..18061)
                     /locus_tag="RJ336_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDZ5212610.1"
                     /translation="MKFFKTHLSLILPLLFMMFAFEFILITNATLKHYEELVNKDYNI
                     IVVSKTELDQNVVKTKVPFFAGLESLDPKDLIDRLKNDVSEKNLKVLKDSLPKFYTLK
                     LNSLPDQNELNSIKNQLLNIVGVSKVETFSKTHDKIYSLLILMKFVFWLFLFIIILLA
                     FVLFLKQMRIWLYEHTDRIEIMCLFGAPFWFRSFMLYKVVVVDCFIAFVILLAFFTQI
                     FDLSIIQESLKAVDIIFPPINFILHLTLIFLATLFICLLCVNTVMFKVKR"
     gene            complement(18048..18713)
                     /locus_tag="RJ336_000127"
     CDS             complement(18048..18713)
                     /locus_tag="RJ336_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5212611.1"
                     /translation="MPNLIQANKLTLGYDELVIKEASFAFKDDDFVFITGKSGSGKST
                     LLKSFYGDLEPISGKLEVCGSLMNKIGNLELLKLRQRIGIIFQDYKLVQEYSVEKNVM
                     LPLMIKGYSKKVCHDQAAKLLKHVNLTFKADKLPNQLSGGEQQRVAMARALAHNPKLL
                     LCDEPTGNLDEYSSDIIWTLLKSARELLGTCVIVVTHRIPSNLRVDYRRFNIENGKMN
                     EIF"
     gene            complement(18783..19961)
                     /gene="trmB"
                     /locus_tag="RJ336_000128"
     CDS             complement(18783..19961)
                     /gene="trmB"
                     /locus_tag="RJ336_000128"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDZ5212612.1"
                     /translation="MPNFKSKKIKEINLPYSKDDVEFLWLAKNDNVSLIYTKVQEESF
                     FLQIKKAQNGFVIKGDKHTKPSKIGYLQKALKIFKEGFCEDIINEAFGLKNNALIEKT
                     PFIVDNFDELLSKLQGKIYIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKL
                     AKVQNVNNILLIQSDARLLLSVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECAR
                     VLTQNGRFELRTDSFEYFNFTLEQFLTFPAPKFSLRKNENLEISSKYEDRWKKQEKNI
                     YDLWVWNFNQECKNYELNEFNLSSVEFSKEDLKKIEQNFKNITIKKDDFFLHFESIYK
                     QDENLLLKVAFGAFNKPEHCYLHLDKTIDFVFKEPFKIQENIKAINELKEILKVQFKI
                     "
     gene            complement(19961..21196)
                     /locus_tag="RJ336_000129"
     CDS             complement(19961..21196)
                     /locus_tag="RJ336_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HDZ5212613.1"
                     /translation="MMKRFRLGFYLSFLTLLLSACSVSQMNSLASSKEPAVNESLPKV
                     ESLKSLSDMSNIAFEWEPLYNENIKGFYLYRSSDENPDFKLVGTIKDKFQTHYVDTKL
                     EPGTKYRYMMKSFNEQGQISEDGKVIEVSTAPRLEAVPFVQAVTNLPNRIKLIWRPHP
                     DFRVDSYIIERTKGDDKEFKKIAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKS
                     EPSQVVSSTSKALPPQVEHLSASTDGSNKIILTWDAPTYEDFSYYKVYSTSSSFLPFS
                     VLAKTDKNSYEDIVEGAGKSKYYKVTMVDKDGLESPMPKDGVEGKTLGNPLAPSIILA
                     QSTSEGINLEWSDNDTRAVEYEVRRYGGEQNAVFKGIKEKRLKDVKALPGVEYSYEVI
                     AIDSAGLRSEPSSKVKAVQ"
     gene            complement(21141..22109)
                     /locus_tag="RJ336_000130"
     CDS             complement(21141..22109)
                     /locus_tag="RJ336_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDZ5212614.1"
                     /translation="MQTFLVDENSRLDVFLAKKLNQSRNQVALLIEKDCVQVNDKIQD
                     KNSFKLKNGDIISIASLKLCNEIKPQFEVDFDIDVLYEDEDLLVLNKPSNLVVHGASS
                     VKNATLVDWLIEKKYTLSNLGGEIRAGLVHRLDKDTSGAILIAKNNFTHQKLSEQLAD
                     KSMGRIYLALIDLPLKEDKIIVEKFLMRSPSNAIKKIAIDKENKFSKNAKSAFINIVK
                     TENLTLMAAKLFTGRTHQIRAHLASLNRHILGDSLYGYKGKYDCRIMLHAYFLYFIHP
                     KTKEQIFVKAPLMEDFKNIMFKQINLGENDEKISLGFLLEFFNSFA"
     gene            22187..23287
                     /locus_tag="RJ336_000131"
     CDS             22187..23287
                     /locus_tag="RJ336_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDZ5212615.1"
                     /translation="MFRLDRRILTHFDYMQPILFLPIILISFFLIFEANPFLAEKQFV
                     YACVGLFAFMVFFFFPIRKFIWIIPVAYWINIFLLLSVDIFGVEKLGAKRWLEIPFTH
                     FTIQPSEIFKPSFILMLAYLIYQNPPPKNGYKLKQFIKLSFYIILPFLLIAKEPDLGS
                     AMVLLLVGFGVLFIMGIHYKIWLSIVIAISVSSPIIYTHLLKPYQKQRIHDFISEKPS
                     YQVAQSMIAIGNGGLTGKSQDEATQTHFKFLPISTSDFIFAYMIERFGFIGGLTLIIF
                     YILLIFHLLSLNYKLKDDYFARVAINCVALFIFIYAAVNISMTIGFAPVVGIPLPFFS
                     YGGSSFTIFMIFFGILQHLITFRYFWTDIKAK"
     gene            23341..23417
                     /locus_tag="RJ336_000132"
     tRNA            23341..23417
                     /locus_tag="RJ336_000132"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23375..23377,aa:Ile,seq:cat)
     gene            complement(23525..23600)
                     /locus_tag="RJ336_000133"
     tRNA            complement(23525..23600)
                     /locus_tag="RJ336_000133"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(23565..23567),aa:Phe,seq:gaa)
     gene            23741..25084
                     /locus_tag="RJ336_000134"
     CDS             23741..25084
                     /locus_tag="RJ336_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HDZ5212616.1"
                     /translation="MKQFGLDRRTFKILLAGYIIIALFGALLLHSSWAHTTPIDFLDA
                     FFTSTSAVSMTGLVVKNTAVDFTLAGQIIILALVQIGGLGYMGIGLFVYILIRKKVGF
                     SARNLLKESLFYPSMDGLFKFFKKVLLFIFTIELIGAILLTMRFALEMNFKKALWFGI
                     FHSISAFNNSGFTIFEHGLIAYKHDIAINLIITSLIIIGGLGYFVLVELYFFQRKKLQ
                     NLSLHTKMVVVASIFLIFSSTLIIFAFEYSNPQTIGHFSFFDKILSSYFIAINYRTAG
                     FNTLDMGHLHDASLFFGSLFMVIGGAPGGTAGGMKVTTVMVLLLYAYWSIRDGRVRIF
                     GHEIPRETISKAFIIAVGSAVYIVIAVILLSLLESKFDFIALLFETSSAFATVGISVG
                     NGGTLSLCALFSDPSKVIIIIMMLSGRIGVFAFLLSVFKQDKAIHLKFPEGKVNL"
     gene            25095..25745
                     /locus_tag="RJ336_000135"
     CDS             25095..25745
                     /locus_tag="RJ336_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HDZ5212617.1"
                     /translation="MKNLNYGIIGLGKFGSVVADELIAGGHTVIVADKDEEALKSIQN
                     PPSYAYILDSTNISALKEAGFHDVEVVIVSIGENVEKSILTLMALKDIGVKNIIAKAT
                     SNIHGQILSKLGATKVIYPEKESAKRLVKEFLTKDADYEVFDLSANTIRAIKINIDEK
                     LAGNSLKHVAQNMKVISYKKLNSDWEILPDLETTTVYSGDVVILLGTVKELREFEH"
     gene            complement(25742..26413)
                     /locus_tag="RJ336_000136"
     CDS             complement(25742..26413)
                     /locus_tag="RJ336_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthetic enzyme MqnA/MqnD family
                     protein"
                     /protein_id="HDZ5212618.1"
                     /translation="MIFGKIDYINLLPLHIYLKKYPLPNGYKASMEYKKGVPSKLNKD
                     LFYRRIDAAIISSIESARKKYKNLDLGICANKRVLSVLVEKNTSNAKDPSSATSNALA
                     KVLKQDGKVIIGDKALKLYLKDPSRYIDLCAKWHEKTGLPFVFARFSCVQKKALYKQI
                     LKKFPETKIKIPYYILQNYAKTRDLDIKDVRYYLDEVIYHKISTKEKTALKRFVKACK
                     ALNLA"
     gene            complement(26419..27045)
                     /gene="upp"
                     /locus_tag="RJ336_000137"
     CDS             complement(26419..27045)
                     /gene="upp"
                     /locus_tag="RJ336_000137"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDZ5212619.1"
                     /translation="MKNIHCINHPLIEHKLGILRAKETKPFQFRMLIDEISSFLLFEA
                     SKDFSLKEIEISTPIQKTTVKKLDEKIMICPILRAALGMLESVFKMIPDASVGFLGFV
                     RNEETLKADFYFQKLPKDAKKRTAIVIDPMFATGGTAIEACNFLKSQGVKKIKFISIL
                     AAPQGLKKFSQMHDDVEVFVACIDEGLNEKGYIIPGLGDAGDRVFNTL"
     gene            complement(27042..28277)
                     /locus_tag="RJ336_000138"
     CDS             complement(27042..28277)
                     /locus_tag="RJ336_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDZ5212620.1"
                     /translation="MNLKEEALKYHLGGKIDIVPSKPMATSYDLSLAYSPGVAEPCLE
                     IAKDNELAYTYTNKANLVAIVSDGSAVLGLGNIGAQASKPVMEGKACLFKKFANVNAY
                     DIEINVHSAEEIVNFCKALAPTVGGINLEDIAAPKCFEIEAALQDLGIPVMHDDQHGT
                     AIISTAGLMNAMEISGKKFKDIKVVVSGAGAAGIASAKMYRNLGVENIILVDSKGVIS
                     KDRNDLTPQKLEFAVDSKEKTLKEVLKGADVFLGLSAPKILDDEMVLSMAKDPVIFAL
                     ANPIPEVMPEDVVRLRKDAIVGTGRSDYANQINNVLGFPFIFRGALDVRASKITENMK
                     VAAAKALADLAKLPVSDAVKKAYNLSTLEFGRDYVIPKPFDERVKAAVSTAVAAAAVK
                     DGVAKVKNFDEKAYFESLK"
     gene            complement(28279..29670)
                     /locus_tag="RJ336_000139"
     CDS             complement(28279..29670)
                     /locus_tag="RJ336_000139"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDZ5212621.1"
                     /translation="MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIE
                     DTDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDEGKAYYCYM
                     SKEELEELRAKQEAAKERPRYDGRYREFKGTPPQGIEPVVRIKAPQSGEIVFEDGVKG
                     EVKFKAEDIMDDFIIARSDGTPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYE
                     ALGFKIPKFFHVAMIHGEDGKKLSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGD
                     DEVFSLEDLKKLFDPYHINKSASCYNAKKLEWLNAHYIKTLPFEEINRQLKDLGFDLS
                     VYGKAGFLLDLLRERAKTLHDIINGAKSIVNAPQNYDENAVQKFVNENNLELLQAFAN
                     TLKDQKTGKDFEDFTNDFLEKKEAKLKDLAQPIRIALTGSAVSPSIFEVLEFLGVDEC
                     KKRIENFLKVRGK"
     gene            29735..30550
                     /gene="salC"
                     /locus_tag="RJ336_000140"
     CDS             29735..30550
                     /gene="salC"
                     /locus_tag="RJ336_000140"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SalC"
                     /protein_id="HDZ5212622.1"
                     /translation="MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVL
                     KIDRNKALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKTNLKSK
                     NQSYEQFRVNFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINTNI
                     YLSNNPQTLENIKNTKKTILKPQNTSLNTSNADPRLLGLLSQIPVGGFSPVLNGKNGY
                     ELYEVKSKDGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEYLR"
     gene            complement(30588..31919)
                     /locus_tag="RJ336_000141"
     CDS             complement(30588..31919)
                     /locus_tag="RJ336_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDZ5212623.1"
                     /translation="MEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLK
                     YADASICIGKARSSESYLNIPAIITAAEIAEADAIFPGYGFLSENQNFVEICAKHNIK
                     FIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVILKA
                     AAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDS
                     FGNVIHVGERDCSMQRRHQKLIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFE
                     FLVDKNLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAEGYALPSQESIKLNGHS
                     IECRITAEDSKTFLPSPGKITKYIPPAGRNVRMESHCYQDYSVPPYYDSMIGKLVVWA
                     EDRNKAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINNNYDTNYLARH"
     gene            complement(31921..32376)
                     /gene="accB"
                     /locus_tag="RJ336_000142"
     CDS             complement(31921..32376)
                     /gene="accB"
                     /locus_tag="RJ336_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDZ5212624.1"
                     /translation="MTKEEIKELVNLFAEANISKIKIKEQDGFEIELERDMCCDVPAP
                     VCPPVPAPQPINVSVVNEAQPSQSVKSNKPSINSPMVGTFYQAPSPGAAPFVKVGSTV
                     KKGDTIAIIEAMKIMNEIEAEFDCRIAEILVADGQPVEFGMPLFAVEKL"
     gene            32525..33085
                     /locus_tag="RJ336_000143"
     CDS             32525..33085
                     /locus_tag="RJ336_000143"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDZ5212625.1"
                     /translation="MGLKADNWIRKMALEHKMIEPFCEANIGKGVVSYGLSSYGYDIR
                     VGREFKIFTNVNSTVVDPKNFVEENVVDFEGDVCIVPANSFALARTIEYFKMPDNVLA
                     ICLGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDE
                     KCDTTYKDKKGKYQAQTGITLPRILK"
     gene            33134..34138
                     /gene="pseB"
                     /locus_tag="RJ336_000144"
     CDS             33134..34138
                     /gene="pseB"
                     /locus_tag="RJ336_000144"
                     /EC_number="4.2.1.115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (inverting)"
                     /protein_id="HDZ5212626.1"
                     /translation="MFNKKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSRDELKQF
                     EMASVFNAPCMRYFIGDVRDKERLSAAMRDVDFVIHAAAMKHVPIAEYNPMECIKTNI
                     HGAQNVIDACFENGVKKCIALSTDKACNPVNLYGATKLASDKLFVAANNIAGNKQTRF
                     GVTRYGNVVGSRGSVVPFFKKLISEGAKELPITDTRMTRFWISLEDGVKFVLSNFERM
                     HGGEIFIPKIPSMKITDLAHALAPHLSHKIIGIRAGEKLHEIMISSDDSHLTYEFENY
                     YAISPSIKLVDKDNDFSINALGEKGQKVKDGFSYSSDNNPLWASEKELLEIINHTEGF
                     "
     gene            34140..35270
                     /gene="pseC"
                     /locus_tag="RJ336_000145"
     CDS             34140..35270
                     /gene="pseC"
                     /locus_tag="RJ336_000145"
                     /EC_number="2.6.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine transaminase"
                     /protein_id="HDZ5212627.1"
                     /translation="MLTYSHQNIDQSDIDALTKALKDEILTGGKKVDEFEEALCEYVG
                     VKHACVLNSATSALHLAYTALGIKEKIVLTTPLTFAATANAALIAGAKVEFIDIKNDG
                     NIDEKKLEARLLKDSKNIGAISVVDFGGNSVEIDEISSLAKKYNIPLIDDASHALGAL
                     YKSEKVGKKADLSIFSFHPVKPITTFEGGAVVSDNEELITKIKLLKSHGIIKKRLWDS
                     DMVELGYNYRLSDVACALGINQLKKLDHNLEKREEIASFYDKEFEKNPYFSTIKIKNY
                     KKSSRHLYPILLFPEFYCQKEELFESLLHAGIGVQVHYKPTYEFSFYKKLLGEIRLQN
                     ADNFYKAELSIPCHQEMNLKDAKFVKDTLFSILEKVKKGYCG"
     gene            35263..36570
                     /locus_tag="RJ336_000146"
     CDS             35263..36570
                     /locus_tag="RJ336_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
                     /protein_id="HDZ5212628.1"
                     /translation="MDKLDFRSQDFNQTGKAMYELACELFPIPRSITGQGFRASLEIL
                     NKTLGGGILKFHSIKSGTKVFDWIVPDEWNAKEAYIITPEGEKICDFKKHNLHLLNYS
                     EAIDKEIELEELQNHLYSIEEMLDAIPYVTSYYKRRWGFCLTHNERKKLKKGKYKVYI
                     NAKHDENGVLDYADFILPSTQNSKDEILISTYLCHPSMANNELSGPVVAIFLAKWLLS
                     LKERKYNYRFVIIPETIGSIVYLSKHLEHLKKHVKAGFVLSCLGDDHAYSLIHTPKEN
                     TLSDKVALHTLKNKENFKTFSFLDRGSDERQYNAPLVNLGIVGVCRTRYLEYEQYHTS
                     KDDLNFISEKGLMGGLQSMQEIILNLEINAVYENTIVCEPNLGKRGLYHTLSTANDIP
                     LACNFLAYCDGENDIIDIANILNMQAYEFKELLEKIKFYGLVK"
     gene            36567..37358
                     /gene="legH"
                     /locus_tag="RJ336_000147"
     CDS             36567..37358
                     /gene="legH"
                     /locus_tag="RJ336_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase LegH"
                     /protein_id="HDZ5212629.1"
                     /translation="MKYFLEHNDKKYSDKDLIDAFYQLGIKRGDILCVHTELFNFGVP
                     LLSRNEFLQTILNCFFEVIGKEGTLIMPTFTYSFCKNEVYDKINSKTKMGALNEYFRK
                     QTGVKRTNDPIFSFAIKGAKEELFLKDTTSCFGENCVYEVLAKENGKYMTFGGQGHTL
                     THYAEEQFNVFYRYHKIFSGILIDENNISYNKTISYYVRKLDISSEPNLINIINIVNN
                     TKNFKKNNFAGDHINIYNAKEYIEILWKKLDINQTILIENYDTIY"
     gene            37389..37619
                     /locus_tag="RJ336_000148"
     CDS             37389..37619
                     /locus_tag="RJ336_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDZ5212630.1"
                     /translation="MEKQFYEILENILETKVDENTNLSMENCKNWTSLAHIDIIMSLE
                     EEFEIKFNKEDLGLLKSQSALLEKIQTLKAEK"
     gene            37616..38509
                     /locus_tag="RJ336_000149"
     CDS             37616..38509
                     /locus_tag="RJ336_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDZ5212631.1"
                     /translation="MKENIEKLFQAIAQKNPIHSKYLKKIEFSQEDEEEFDKLISYYI
                     QDGISIKEQCDCYLLILNDTLEETKFFIENGAYRYSSFDEVKDKVYFNESYMKQYMIG
                     LALSSFVWIAHIKVRKYFSQYLKNFTPKTTYFEIGPGHGEYFARAVKSGKFSAFYGLD
                     ISPTSCELTQKMVKQQVGGLITKCDFLCQDFFTYDFDKKADLIVIGEVLEHVEKPLEF
                     LKRSKELLSDGGEIFATIPINAPAIDHIYLFSHPDEVKDLIEKSGLKLKTYECFMAND
                     YSLEKALKFKNAITMAVVLNA"
     gene            38502..38918
                     /locus_tag="RJ336_000150"
     CDS             38502..38918
                     /locus_tag="RJ336_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDZ5212632.1"
                     /translation="MLNTTLNLPIHHIGVACKNLEKERECFFKLGFYKESEFVDEKQG
                     VRGEFIIPCNEAFPQYRFELLQNLNDKGPLDSYLKNNTKMYHLAYESKNITQDLILLE
                     QQGGICIVPIMQASYFAKLCFIMMPNRLLIELVELK"
     gene            38915..40477
                     /locus_tag="RJ336_000151"
     CDS             38915..40477
                     /locus_tag="RJ336_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDZ5212633.1"
                     /translation="MNLFSPHLKRNELIKFAKELDFSKSQDLLINVHRNHAFEGVQSI
                     IAPFLHFANLKAEFNFSSYDDSLSFDNFKEANLELLWLDLTRYKNNVQNFIEERLLEL
                     RKISQNPILVLSLGEFKTDKKNLNCEIFNIEKLIKEYFDEEDILDLAKEELTGSKLNN
                     KALIFLAQILGLSLIPALVKPALKALVLDLDNTLYQGILGEEGIDNLNLSPLHKTLQE
                     KIKTFKKQGFLLALASKNEEKDAKKLFEIRKDFILQWDDFDVRMINWEPKGENILKIA
                     KKFNINTNAMLFIDDNIAELENTKFTGVKTLLCDENILYKIKLFPNLLKLSNTKEDQI
                     RAKDIAANALREELKSLSDEEYFQNLEISLNFSKNDLQNIPRISELLGKTNQFIANYT
                     RLNQEKVAQHMQKELIVSVSMSDKLSDSGIIAIFVFSCKEGNLFIDDLCISCRALGRK
                     LETRMFFKAFELALHFFDLKNNNARLYYQKGERNMPFLSFLEQISKEIEKNSALVSFQ
                     NLNFKGLIIHEN"
     gene            40467..41528
                     /locus_tag="RJ336_000152"
     CDS             40467..41528
                     /locus_tag="RJ336_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HDZ5212634.1"
                     /translation="MKTRFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKK
                     VIGLKTRYICDKNTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSLDFFMPSTACY
                     LHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGKILLVCGDTLSKFIHPKNM
                     NLAPIFGDGVSATLIEKTDFNEAFFELGSDGRHFDKLIIPKGAMRIPKADIFNDDSLM
                     QTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVEEKDIAFHLFHQSNAYLVD
                     CIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEFKASLSAFGAGLSWGSA
                     VLNFKDLYTKDILIYTKEK"
     gene            41528..41749
                     /locus_tag="RJ336_000153"
     CDS             41528..41749
                     /locus_tag="RJ336_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDZ5212635.1"
                     /translation="MTKTEFLEELKEAMHRDEDLNEDMLLDDIDEWDSLAFVSVMVLY
                     KNLFALKITAEDLKNCQKVSDLIDLAKLD"
     gene            complement(41763..42338)
                     /locus_tag="RJ336_000154"
                     /pseudo
     CDS             complement(41763..42338)
                     /locus_tag="RJ336_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108902.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
     gene            complement(42322..42978)
                     /locus_tag="RJ336_000155"
     CDS             complement(42322..42978)
                     /locus_tag="RJ336_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDZ5212636.1"
                     /translation="MLINQTFEIDSCDDVELGIKRTSKLEYRISYDDEKDLKAIVFVI
                     GGYGANANISFLDFDREYIAKNFNVVAVHVFYHCFCARISNNKKYSASISFMEEDLLS
                     LSKILLDFGINPQNLDCKNSTKYYELLNQHIITLKSQGKLAQNYQAKFTSTFIPPNGD
                     YQNYGIMAAIDHINALKDLVKRFPEFADLPKIYGGGVLWRIPIFTHSKNSSLVCGWRD
                     "
     gene            43058..43756
                     /gene="pseF"
                     /locus_tag="RJ336_000156"
     CDS             43058..43756
                     /gene="pseF"
                     /locus_tag="RJ336_000156"
                     /EC_number="2.7.7.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid cytidylyltransferase"
                     /protein_id="HDZ5212637.1"
                     /translation="MKNLCIIPARGGSKRIPRKNIIDFLGKPLIAYSIENALNSGIFD
                     EVVLSSDDEEIIEVALKYGAKAPFVRDKNLSDDYASSTAVVQNAIEILQSQNQIYDHV
                     CCLYATAPLLNKDILKQAYEKFIQNQSKFLFAATEFEYPIQRAFYLNENNQVYMFDEK
                     HYKSRSQDLTKAYHDAGAFYFGTSKAWLEEDFIFKPHSSVFVLPRNLVCDIDTIQDLE
                     FAKILYKVNHESAF"
     gene            43740..44564
                     /gene="pseG"
                     /locus_tag="RJ336_000157"
     CDS             43740..44564
                     /gene="pseG"
                     /locus_tag="RJ336_000157"
                     /EC_number="3.6.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,4-diacetamido-2,4,
                     6-trideoxy-beta-L-altropyranose hydrolase"
                     /protein_id="HDZ5212638.1"
                     /translation="MKVLFRSDSSSQIGFGHIKRDLVLAKQYDDVSFACLPLEGSLID
                     EIPYPVYELSSESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDE
                     IKPHHCDILLNVNAYAKASDYEGLVPFKCEVRCGFSYALIREEFYQEAKENREKKYDF
                     FICMGGTDIKNLSLQIASELPKTKIISIATSSSNPNLKKLQKFAKLHNNIRLFIDHEN
                     IAKLMNESNKLIISASSLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYKY"
     gene            44561..45034
                     /gene="pseH"
                     /locus_tag="RJ336_000158"
     CDS             44561..45034
                     /gene="pseH"
                     /locus_tag="RJ336_000158"
                     /EC_number="2.3.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase"
                     /protein_id="HDZ5212639.1"
                     /translation="MIKLKNFTELNSQEIELIFKWRNHPDINQFMKTKYIDFKEHLRF
                     LKKLHQDSSKKYFLVFQDEQIIGVIDFVNITTKSCEFGLYAKPNLKGVGQILMNEIIK
                     YAFENLKVNTLKAYVFKDNRKALKLYQQNHFTIYDEDKDFYHICLKQSDCKALPS"
     gene            complement(44999..45745)
                     /gene="hisF"
                     /locus_tag="RJ336_000159"
     CDS             complement(44999..45745)
                     /gene="hisF"
                     /locus_tag="RJ336_000159"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDZ5212640.1"
                     /translation="MLKTRIIPCVLLKNGQLVKSIEFKDFRTIGHLTSTMRIYNARNV
                     DELIILDIDASKSGEIDFESIEDLAKECFMPLTIGGGIKTLEDIQKILNLGADKISIN
                     SKALEDMDFISKAANRFGSQCIVCSIDVKRKGGQFCVYDRGNLLEKSPLELALEYEKK
                     GAGELLLTSVDFEGRAKGYDLELLKIFQNKLKIPLIINGGLSNPSDGVEALNLGADAL
                     AGAYIFHFSKYTPKDVKEELARQGFAVRLL"
     gene            complement(45746..46351)
                     /gene="hisH"
                     /locus_tag="RJ336_000160"
     CDS             complement(45746..46351)
                     /gene="hisH"
                     /locus_tag="RJ336_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDZ5212641.1"
                     /translation="MIALIDYKAGNLNSVAKAFEKIGAINFIAKNPKDLQKADKLLLP
                     GVGSFKEAMKNLKEFGFIEALKEQVLVQKKPILGICLGMQLFLERGYEGGVCEGLGFI
                     EGEVVKFEEDLNLKIPHMGWNELEILKQVPLYQGIDNKSDFYFVHSFYVKCKDEFVSA
                     KAQYGHKFVASLQKDHIFATQFHPEKSQNLGLKLLENFARL"
     gene            complement(46348..47484)
                     /gene="pseA"
                     /locus_tag="RJ336_000161"
     CDS             complement(46348..47484)
                     /gene="pseA"
                     /locus_tag="RJ336_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid biosynthesis protein PseA"
                     /protein_id="HDZ5212642.1"
                     /translation="MKFCKKCVMPDTKPDLHFDEEGVCDACRSQEAKNQNINWQEREK
                     EFFELIKKYKKHPVYDCVIGVSGGKDSTFQVVKMLELGLNPLCVCFEPSVPTKIGRKN
                     LDNLNHLGVDLIHIKRDPKVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPL
                     IIWGESPQIEYGGPASSKNKNILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTY
                     PSDEELQRVGVTGLFLGYYFKWDYKKILEISKKYGFLTLDHPVETTYENFENLDCYSN
                     HVHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLVQKYDGKPPKKAIKKYLEFSG
                     FSEEEFQKIVDSFTNKKIFKRDENGKFIRDYDGSLVRKDECVLK"
BASE COUNT        16118 a         8285 c         6589 g        16520 t
ORIGIN      
        1 taatttatca aattttaaat aaaattatgt aaagatttta aagactacat aaaaatttac
       61 aaggacacta gaatgattaa tgtgttgatg atagaagatg atcctgactt tgcacaatta
      121 ttatctgaat atttagcgca atttaatatt aaaatcacaa attttgaaaa tcctaaaagt
      181 gctttaaatg tgggtattca aggctatgat tgtctgattt tagatttaac tttacctgga
      241 attgatggtc ttgaagtttg tagagaaatc cgacaaaaaa gcaatattcc tattatcatc
      301 tcatcggcta gaggtgactt aagcgataaa gttgtggggc ttcaaatcgg tgctgatgat
      361 tatctaccaa agccttacga tccaaaagaa atgtatgcaa ggattatgag tcttattcgt
      421 cgcacaaaaa gagttgaaca cactaataat gaaaatatta actctgcttt caaaattgat
      481 gaaagaagac atgagatcac ctatgaagat aaggttttaa cacttactcc tgctgaattt
      541 gaaattttag aataccttat ccaacaacac ggatatagtg tttcaagaga acagcttgta
      601 agtcgctgta aaaatctaaa agataaagat tctaaaagcc ttgatgttat catcggtcgc
      661 ttaagggtaa aaataggaga tagttcaaaa tctccaaaac atattttttc tgttagaggt
      721 ataggatata aactgatagg atgacaaaaa attattctat tcataccaaa ctgattattt
      781 tatttgttgt tacttttttc ttggtttgtg tgctttttat cgttctttta aaaatagaag
      841 ggaatgccta taatgaagaa gaaagtttaa aacaagaaaa tcttataaaa aatttactca
      901 tctcctatga aaacacttca ggtgttgaaa taggagctta tcttggaaac agcggtttta
      961 acgctataca aaatcccaat cttgtaaaag ctataagaaa taatggacaa tcacttttta
     1021 aagcaggtgg agagctttgt actctttctt ctttaaaata tcatagcaat ctttattttg
     1081 atgttcaatg taaagatttt gacggcttgt atgaagaaaa tactagcgat agggtttata
     1141 atcttttatt gataggattt ttctcttttt ctttattggt tgtttttatg tatttttctg
     1201 tattaagatc cttagagcct ttaaaaaaat taagaagaca agttgccgaa gttgcaaatg
     1261 gggaacaacc tgattttcta gactatcaag aagatgaagt aggcaagatc gcctttgaat
     1321 ttcaaaaagc tttcaagaaa aatcaagaat taatccaatc aagacaactt ttcctaagaa
     1381 caatcatgca tgagctaaaa acccctatag gaaaagggag aatcatttct gaaatgatca
     1441 aagaagacag acaaaaagaa agacttatcg ctatattttt acgcatggat tctttgatca
     1501 atgaatttgc caaaatcgaa aatttatttt caaaaaacta caacttacac tttaaaccta
     1561 gtcgttttag tgctatactt gaagaagcca aagaacacct tatgagagat gattttaaca
     1621 aagtggtaaa agttgatata agatatgatg ctttaatcaa tgttgatatg gaaattttct
     1681 ctgtaatttt aaaaaatctt atcgataatg ccttaaaata ctcaaacaat ggcacttgtg
     1741 agcttttttg ttgtaaagaa tgttttacca ttaaaaatcc aggcaaacct ttagcagagc
     1801 ctatagagca ttatcttgaa gcttttacaa gagaaaaaca taatcaggtc aaaggtatgg
     1861 ggctaggact ttatatagtt tcagaggtat gtaaactgca taattttgat ttgatttatt
     1921 tttatgatga tggaaagcat tgctttaaaa ttttctttgg agataaagaa aaataatggc
     1981 aaaaggccta gaaaaattca atgaacttgt tgaaagtttt gcaaatttac ctaccatagg
     2041 aaaaaaaacc gctataaggc ttgcttatca tctttgcata aataatcaaa tcgatggcat
     2101 gaaactcgca cacaatatag aaaatgctat ccgctttata aaaccttgtg ggcaatgcgg
     2161 tgctttaagc gaaaatgagc tttgcgaaat ttgtagcgat gaagaaagaa ataaaaacat
     2221 tttatgtata gttgaaagcc caaaagatat actaacactc gaagagagtc aaagttacaa
     2281 tgggctatat tttgttttag atgagttaaa tgaagaaaaa cttgaaaaac taaagcaaat
     2341 catacttaag ctaaatatct ctgagctcat ttttgcattg acacatagca ttaattctga
     2401 tgcaactatc ttttttatag aagataaatt taaaggctta aacctaactt ttagtaaaat
     2461 cgctcaagga attccaagtg gtgtgaattt agaaaatgtg gatttaatct ctttaaataa
     2521 agctatgaat tttagaacaa aaatttagta atttttataa gaaatatcgg ctaattcttg
     2581 caaagaaaaa tccgcaatct tttcataagc aaaaccttcc ttggttaaaa aatcaagtaa
     2641 agttttttcc atgattttag ctccttgtat aagctcatct gaaagcttaa aactcatcgc
     2701 ttcaatacgc tttggcacac aagctaagat gtgtgtttta ggcaaatctc ctgcaagttc
     2761 catgtattgt aaggtttgaa gcatttctat ttcatgagca cttccactcc agctgatttt
     2821 attaggcata gcatcataag gaaagaaaaa tatatctcct atactcgcat cttgcgcttc
     2881 tatgcagtct aaaacgataa gtctatcgta cctagcgatg atatagctaa gttgcaaagc
     2941 taaagttcca ccatcaataa aatctaaagt aaattcagga tgagtaaatt tgtagttttt
     3001 ttcaagttgt ttgcaaagat gaacgcctaa gccttcatct gcaaacatga tattgcctat
     3061 tccaaggact aagaatttca atgcttttct tcttttatat atttatatcc gctaataata
     3121 gcatccatag caccatcttt accttttact gcgttaaaaa tcgccatata aatatgtact
     3181 ggtacaaaaa tcataatcac ccacatcaaa attctatgat aagttcttac atcagccaag
     3241 ccacccattg cagcttcaag cggtcttaaa atatgatata aaagcccacc taagccctca
     3301 tgataagtat gagtataaag aataagccct gtaagaatga tacctaacat cacaagataa
     3361 aagaaaaaat aagttacaaa ttgcaaagga ttataaaccc cttttaaatg cggatgtttt
     3421 cctaagaaaa tgtaaaattt tacttgttct atccataatt tgatattaaa aatatcccat
     3481 acacttctgc gttcttttgc gcttacctta tcgcagaaaa acaaatatac tttaaaaata
     3541 atacaagcga ttaaaacaaa acccaccgct tgatgcacta agcggtattt tgcttgcata
     3601 aaatttacgg gttcgccgtt gctaatagga ctttgaaaca cataagaaag ataatatcct
     3661 gtgccaataa gaatcactat agcaatagct cttacccagt gcgttaaacg caaacctatg
     3721 ctaaattcat attcagcttt tctttgcaat ttttcttctt tgttttgcat gaaagcctcc
     3781 ttatagattg acattcactt tatattcgct tagattattg cccttagcat ccattacatg
     3841 caccgcacaa gcaatacaag gatcataaga gtgaattttt ctaatgattt caagtggttg
     3901 ttttacatca gcgattttaa gtcctatcaa acattgctca taacttccac ctatgccatt
     3961 tgcgtctttt ggacttgcat tccaagtaga aggcactaca gcttgccagt tttcaatgac
     4021 gccattttta attctacacc aatggcttaa tgttccgcgt ggcacatgcc ccatatagcg
     4081 tcctttatat tctttagaat tatcaatcac ataaggagca caagtactct gatctacttt
     4141 taaattttca actaaattat taaacgcttt taaagcatta tttgcaacga tttttgcttc
     4201 aatacaacgc gcagctgttc ttccaagtgt gctaaataca gcatttaaag gaagtcctgt
     4261 ttcttttaag aactcatcta ctacaggaac aacatttgga ttacccttag cataatttac
     4321 aacgatattt gctaaaggtc ctacttgcat agggtttcct tcatagcgtg gagctttaat
     4381 ccaactatat ttacccttag tatcaaacac tttagaatgg acattatttc catgatgatc
     4441 tacgctttct ccatctacaa gtcctgtata atttggattt gttttgccat cataaggatg
     4501 taaaggttca ttgtctgcat accaagaatg agttgcctct tcggtaatct tatcttcttc
     4561 tacttcataa accttgctta aatctccatt tttgataata ccactttcaa aaagccattc
     4621 atctcttccg atttgaaatt ctttaaaggt gtaaagatta tttaccccta tatcatttaa
     4681 aacacttgct tcatgtgcat aagcttttcc tgccatcaca agatcaggat aatacgcacg
     4741 attaacaaag tcttgcactt cttggaattt aaccatatat tcacccattc ttgcaggatc
     4801 aagtaaatcc ataacgcaag ttacaccacc aacagttaag ctttgtggat gtgggttttt
     4861 agctccaaaa atcgccatac attgagcaat gattctttga attcttaaac attctagata
     4921 gtgagaaaga acaattaaat tttgctcagg agttaaacga taagttggat gaccatagta
     4981 cgcattagca aaaggtccta aatttccttt atctacaaaa gttttaagtc tttgttgcac
     5041 ttcaagaagt ttatctgcac ctgttgcata aggatttgaa gtgtatttaa aagcttcatc
     5101 gcttgctttt ttaacatcag cacttaaagc acttaccaca tcagcccaat caagcccatg
     5161 aagttgataa aaatgcacaa tatgatcgtg taaaaataaa gctgcattca ttaaagttct
     5221 tgttaaaagc gcatttaaag gcggagtaat acctaaagca ttttcaacag caactatacc
     5281 tgctttataa tgtgaaaaag tacaaactcc acaaattctt tgtgtcataa aacccgcatc
     5341 tcttggatca cgccctttta ctatggtttc aataccacgc cacaaagtag agcccgcata
     5401 agcttctttt accacattat tatcatcaac aacaacttca actcttaaat gcccttcaat
     5461 tcttgtaata ggatctacga ttattttttg actcattttt attccttatc tttttgcatg
     5521 gaagatatca ctgcgtgtgc tgctatagca acgcctgtaa gtgtaagcac acctatgccg
     5581 attttatctg aaacactatc cgcacccaag ccaaaaacag tatcaaattt acgactagcc
     5641 ataggctctt caaaaggccc catagtatcc caaaaatcag gctcagaaca acctatacaa
     5701 ccatgtcctg cttgaatagg ccaagaagtg tgctggttaa atctctctct tgagcagtta
     5761 ttaaaagtat aaggcccttt acaacctact ttataaagac aaaaaccttg ttttgctcct
     5821 tcatctccaa aagcatgtac aaactcaccc gcatcaaaat gtccgcgtct ttcacaaaga
     5881 tcatgaattc ttagaccata agcccatttt ggtctattat acacatcaag tgctggtaac
     5941 tcaccaaata ataaataatg aagcacatta cccactatat ttttttcact tggaggacag
     6001 cctggaacat tgatcacagt tttgcttgtt actttgctta aaggctgtgc gttactagga
     6061 tttggtcttg cggcttggat tcctccaaag ctagaacagg ttcctatagc aaaaattgcc
     6121 aaagcatttt cacttgccat ttttgagagc tcatagcctg tttttccatg tgcacctatg
     6181 gttaaaaaat gctctgtatc acccataggg ataccacctt caaccattaa aatgtattta
     6241 tttttatgct tttgaatggc actttctaaa ttttcttcag cttgccaacc tgctgcagcc
     6301 atcactgttt cgtgatattc taaagaaata taatcaaaaa tcaaactatc aatcgttgga
     6361 gtatcacttc ttaacaaact ctcgctacag cctgtacact cagccatatg aagccacaca
     6421 acaggaagcc tatcagcaag ctcagcagct tttgccacca taggagtaaa actcgctggc
     6481 aaagccaaaa atgcagtcat agcacctgcc catttcataa aatcccttct agaaaaacct
     6541 gacttttcta atgcttttgt aatactatca ttgtctttca aagaaggaag cttttcaaga
     6601 gccgataaac gcgactctat ttgatgataa tcaatcatta tatttccttt ataacatgaa
     6661 atttattctc tataataata aaataaagga agttaaaata aagttaaaaa cttactctca
     6721 taagcaaata ttagtattac tcttaattaa agcttaatca taagcctttt ttgagttttc
     6781 gaatcaaaaa tcttgcaggg tgaatagcgt ggatgtattt tttttctaaa tacaagggtt
     6841 cattatttat caatgcacac aaataccttg ccgctaaaac acttgtgcta aaaccccttg
     6901 atccatgagc aaaattaaaa tacaaattac aagatatttt agctagcttt tgctccttgt
     6961 tttttgtcca taataaagct ttatattctt ctttataaaa cacttcatca taggcatttc
     7021 caactatcat aaagcgatca ctcgaataag atctaaagcc taccttagaa cctatgattt
     7081 ctaattttgt atttttatct ataaattcgg ctatattttc tatattttgt ttatcatctt
     7141 cttcttttga ttctaaactt gcatcaagcc tatcataact tgctccaatc acttgcaaat
     7201 catcttttac agggcaaata taagccttag aagataaagg aaatggagta tttaaaaaag
     7261 gttttagatg tgtaacttga cctcttactt tgcttaattt catctcatca taaaaaacaa
     7321 aatcttttgt atctgcaccc atagcataaa tcaaaaccgc ataatcactt ttaacaatat
     7381 catttttaaa ttttaaagta aaacactcat tttcaaattt ataagcttga aattcatgat
     7441 taaaatatat acaagcttta cttttttcaa aaagattttt aaccaaattt tttggaaaaa
     7501 tcactccacc ctcttctaaa aaagcttgat tttttgaaat tttaaacaaa acattttctc
     7561 tttgtgtgtc aaatctttct tgcatcaaat cattatgtgc aaactccacc acacccttaa
     7621 attctaaatc taaaatttgt ctataaaaac ggcttgcttc tataaaagaa agctctgaaa
     7681 actcccctaa atttacctta ggttttaaga ttaaagagct taaaattcca ctttcatttc
     7741 cacttgcacc cttgcctaat tctaaatgtt tttcaaaaac atctatctca aaacctctta
     7801 aactaagctc ataagctaaa acagcgcttg atatacctgc accaataata gctacttttt
     7861 tattttttaa agatgaaaat gttcttgaaa aatacgcttc tttgtcttta aactcaagct
     7921 cattttccaa ataagcttta atcatttctc tttttctaaa acctttggtt ttttctactc
     7981 taaagccata tttttttaaa tttttttgta aaaaacttgc cgaagaaaag gtacaaattt
     8041 gtgtattttt tttagaaagt cttgccactt caaaaattaa attttcatca aacatttgcg
     8101 aatttttatt tggagaaaat ccatctaaat accaaatatc agctttaaaa tccaattctt
     8161 ttaaaatagt aatatcttca aaaacaagat ctaaaaaaca gtcttcaaaa taaaaacgat
     8221 aaatcccttc tttagcttta ggataaaatt ttaaaaattg ttctaaaagc tctttaaact
     8281 cttcataaaa tcctagtttt tgataaattt ctcttaattg ttctttttcg atataaaaag
     8341 cttctatgct aatataaaaa agtttcttag gacgcttaga aggagtagtt tgtaaaaagc
     8401 gcttcaaagt aagaaaaaaa tttaaaccta taccaaaacc actctctgcg ataatgaaat
     8461 tttcttgatt tttccattca aaagaatgag tataaacaaa tttactttca tttaaaccat
     8521 ctttggaatt aaaataaaaa tcatcaaaat ccaaagaaaa aggagtatta tctttaaaga
     8581 ttaacttagc ttttttcatc ggttgttata aaaataactc tcaactccat cagcaatacc
     8641 cttaaccaat aaatcttgaa aagctttatt ggcgattctt ttgccttcat ttggatgtgt
     8701 gatatagcca atttcaatca aaattgcagg catttgcgca cctactaaaa cccaaaaagg
     8761 tgcttctctt acaccgccat ctacgatttt atactttttg cgtgtttgag tgagtatatt
     8821 tttttgtaca tcaatggcta gtttatttga agcaacgatt ttttcacgat ttaagaaatt
     8881 taaaatactt tgttttgaga aataattaat ctcttcaaaa tctccttgat tttctttttc
     8941 tgctgccttt ttacttcttt cacttcttgc aggacttaaa aagaaagttt ccacaccttc
     9001 actacttttg gcttttgtgg catttggtgc tgcattagca tgtatagaaa taaacaaatc
     9061 cgctctttta tcattggcat atttagttct atcacgaaga ttgataaatt tatccgaact
     9121 tctagtataa agcactttat aaccgcgttt tttaagttca tttccaagtt ttaaagccgt
     9181 gcttaaaact atatcttttt cttttaagct tcctttttta tcacttaagg caccgctatc
     9241 ttttccacca tgccccgcat cgataaccac aagctttcct gatttgtaat ttgtatttaa
     9301 agttttacta gaactttgag ttgctttttt gtttacattt tgatttgtag tttgtgcata
     9361 aaaacctaaa gtgagatttt tattatccaa ctcctttaag agtttaaatt ctttaggagc
     9421 actcaaaacc acacgaacag tttttggatt gtattgagta actgtaatca cattttgtcc
     9481 aaaagtaaag ctttttctat taccttctaa cacaccctta aaacttacaa catatcggaa
     9541 tttttgatct ttggtatcaa atactgctat ttctttttca tctaaatcat cgcttaaatt
     9601 taacaccaca gcattagaaa ttttatccac atctaaaaca tataaaggct cttgattttc
     9661 tttttcgtta ttggtttttt tatcttgttt ttttgtttct aaagctttgg ttttaatttc
     9721 tgttttttga tcttgctttt tctctgaaat tttactaact tgctcagtct ttttttggct
     9781 agtagtttct tttgaaaaaa ttaatttttc ttctttaaaa gatatatcaa taggaatttt
     9841 ttctttagca taaaccacta tgcgtatggt tttgggatta aattgtgaaa tcactaaacg
     9901 atagtcatca aatttaaact cttttttacc cccttctaaa accccctcaa aatcactaat
     9961 aaaacgatag tttccttttt cgtctaaagc aaaacttttt aattgatcct tatccaaatc
    10021 tgcatttagt tcaaactcta caccttggtt tgttttactt gactttaaaa cataaatttt
    10081 atcatcgctt tttgctttag aaacgatact actctttggt gcttgcgaag ttttagaatt
    10141 tgttttttct gtatttttta tttgttcgtt agatgatttt ttttcatttt tttgaactgt
    10201 ttttataggt tcaaaagttg atttttcagt atcttgagaa atattttgaa ccttaatatc
    10261 tttaataaca gcctttctta aagcattaat acttgcttca cttataccac tttcttttaa
    10321 ctcattagca tatgacttgt catctaaatt taaagtattt gaactgatga tcaatctttt
    10381 taaaatttca attttagttt tttcatcttc attaataaca ctttgtatat aaaggctttt
    10441 gagctgatgg tgaaatttta cttgtacttc acttttagaa ccgataaaat ttttatcgaa
    10501 atttgcaagt tcattttcat aggctccaaa aagagttgtg aaaacaaata ctaaaaatac
    10561 aaaaatttta gccattattc accattaacc aatttttcca taagttcttt aacactgata
    10621 agcttatcta aacgatatcc atttgcacct gtaaagaaaa gccctgtttc ttttttacct
    10681 gaccacgcat caaaaagcct atctgctata caatacccta ctttagttgc ctcttttccg
    10741 cgtccacaag gcgctacaca attgcttata caattgatct ttggacctat tcttttatct
    10801 accaaattta aaagattggt tctaacccca cgtgcaggat agcccacagg agatttaata
    10861 agctctatat cttcttcttt agaagctagt aaaacgcttt taaattcttc gcttgcatca
    10921 cattcaaaag ttcctatgaa acgcgttccc atttgaacac cactagcccc taaagaaata
    10981 gcgttttcta tatctttttt atcccaaatt ccacctgcag caatcacagg aaaagacccc
    11041 caatttttag cctcttctac cacaggagcg attaattttt ctagctgata atttggatct
    11101 aagcactgct cataagtaaa accttgatga cctccacttt ttggcccttc taaaaccact
    11161 gcatcaggca agcgattgta acggctttgc catcttttgc aaataatttt taaagccttt
    11221 gcagatgaaa tgataggcac taaagccaca tcaggaaaat ctgcagtaaa ttcaggtaaa
    11281 tttgtgggaa gtccagcacc tgaaacaatc acattaaaac caacttcaca agcatcgcgt
    11341 gctattcttg cataatcatt acttgcacat aagatattac accctaaagg tgcatcgcca
    11401 caaacttttc ttgcattatt aatcaaagct tgcaaaccct tgcgtgagta aaaattttca
    11461 cttccataag gcttagcatt taattcttta cttgcatact ttctttcttc ataatatcct
    11521 gttcccacag aagaaatgat cccaagtcca ccatttaaag aaactgcaga agctaatcta
    11581 tcccagctta tgcctagtcc cattccccct tgaaaaatgg gatattttat agtatgtttt
    11641 cctatttgta agggttgtaa attcattctt ttacctttaa ttttgcaaat tttcttttac
    11701 ctatttgtaa gatgtattct ccttgttcta aatgcatttg ctcgtcgcta actttttgag
    11761 aatttacact tactgcatta gcactgatgc ttcttcttgc cgcagaagta gaactttcca
    11821 aaccacattc aaccaaagcc ttagcaagcc aaatttttcc ttgtatttca aactcagcca
    11881 tatcacttgg taaagcattt tgagaatgaa tcctatcaaa ttcagactta gcattattag
    11941 cctcttcttt ggagtgaaaa cgctccgtaa tctctaaagc taaattttct ttagcttttt
    12001 taggatgtaa attgccttgt tctatatctt tttttatttg cgcgatttct tctagacttt
    12061 tttgacttaa aagttcataa tatctaaaca tcaattcatc actaatactt aaaattttag
    12121 catacatatc attagctttt tctgtaacac caatgtaatt atttaaactc ttactcattt
    12181 tgtttacacc atctaaacct tcgagtaaag gcatcataat cacagcttgt tcttttccta
    12241 tattataaac cctttgaagc tgtcttccca ttaaaagatt aaatttttga tccgttccgc
    12301 ccatttcaat atcgcttttt aaagccacgc tatcatatcc ttgaagtaaa ggatacaaaa
    12361 actcgcaaat cgaaataggg ctttgctctt taaatctctt ggtaaaatcg tcacgctcaa
    12421 gcattctagc tacactaaaa gttgaagtaa gctctactat acccgcagct ccaagttcat
    12481 taagccaagt agaattaaac ttaatctgtg ttttttcttt atccaaaacc ttaaaaacct
    12541 gcgtttcata agttttagca ttgattaaaa cttgctcttt atccagcttt ttacgcgttg
    12601 cactttttcc acttggatcg ccaatttgtc ctgtaaaatc cccaatcaaa aattgcacaa
    12661 tagctccatg tttttgcaaa aaagccattt ttgttaaaac cacgctatga cctaaatgta
    12721 aatcaggtgc tgtaggatca aaccctgcct ttatgaagaa attttcaccc ttttcataat
    12781 aatttttaat taaattttct attctttctt catcaataag ctctgcacag ccacgcttaa
    12841 cttctgctaa tatttttttt atatccataa taaacctttt taaccttctt tataagcatc
    12901 atttaaagat gtaaaatcta aaattttaca acgagatttt aacctatcct tgacactatc
    12961 tgggttgata ttatcaggaa tttccattgt aatctcaaaa taatctaccg ccgaatttaa
    13021 atcacttgat aaattaattg ttaataaatt tatctgcatt ttagctaaaa atgccaaaaa
    13081 ttccgctaaa acaccttttt tattttccaa agaaaaaatc aatttataag atttagggat
    13141 gttagaatcc cattttataa ataccatatc ttgattatta tctatcattt tatcagctct
    13201 atcgcaaagc ttatgatgga caatagcgtt accaccttta acaaaagcta aaacagcatc
    13261 acctcttttt ggatggcaac aaaaatcaaa atccacatta gcgattttat ggttgcaata
    13321 tagagtaaaa tttcctattt tttgttcttt aatctcatat ttatcaaacc aatatgactt
    13381 cttggcgtat tttttaagac cattaactat atcttttaaa taagcactat ctgttgctac
    13441 ttgtctaata cgtctggcta aattttcttt ttctatccaa gtttcaattc tgtttttatc
    13501 aactccaaaa ataaaactta acatattaat agaacttgct agattaatct ctctgatttt
    13561 ttgcttacaa aattccctta tacttgcttt tgcttttcct gttttaacac tatctatcca
    13621 agaacagcga taaaatttat cattactagt aaccactcgc acaatatcgc catttttaag
    13681 ctcggttaac aaaggtactt taatacgatt tacataagca ctttttgcat gaagccctac
    13741 tttggtatgc acttcatagg caaaatcaag aaccgttgca ccacgaggca aagtgaaaat
    13801 ttctccctta ggagaataaa ctgcgacatc ttcaacataa agactatctt tagcatattc
    13861 ataaagttca atagcattat aatcttctgc attttcaaga ttgtttatac tttgcattga
    13921 aatatctgta agccaatcaa gacgaggcgc aaccacactg ccatcttctt tatatttcca
    13981 atgcgctgct ataccaaatt ccgcaatttt atgcatatca aaagttcgaa tttgtgcttc
    14041 tataatactt ttagcatcaa aaagtgtggt atgtatggtt tgataaccat tttgtttagg
    14101 caaggctata taatccttaa aacgcgaaac caaggggtta aaatgtgtat gtaaaattcc
    14161 caaagctaaa taacaatcac ttactttttc aaccaaaatt cttaccccaa gcaaatcaag
    14221 aacttcttca ataccaatgc cttttctttg cattttaaga taaatagaat agctatgttt
    14281 aatgcgtttt tgaatttcaa aactaccttg tctaaagcca ttgctcaaaa ataaaagttc
    14341 gattttggaa ataaattcat ttaaacctaa ttgcatttct tgattattgg agttgatata
    14401 attgtcaata agcttatact catctggcat aagatattta aaactaagat cttccaaata
    14461 attttttatg cttgaaatac cgagtctatg ggctattgga gcatatacaa ctaaagtttc
    14521 ttcgctgatt cttttttgct tatcttctct tagaatatca agagtaagca tattatgcag
    14581 cctatcacat aacttcacaa tcaaaacccc aacatcttca atgcttgcta aaagcatatt
    14641 tctgaaagtc aaggctgatt tagttaaact ttttttagat tttgatgaaa tgagattatc
    14701 ttctctaatt tctataattt tagtaagtcc taaaacaagt tttaaaacct cagaaccaaa
    14761 ctgctctcta agttcttctt cagtgcagtt tgtatcttca atcacatcat gcaataaagc
    14821 agctaaaata ttgcttttat tttcacttaa aaatccaacc agtgttgcca ctaaaatagg
    14881 atgtaccgca taaggctctc cactttttct aaactgccct tcatggcaaa atatacagta
    14941 atctaccgct ttttcaagaa tggcatcatg gccacaaatt tcgaaaagca aagccttagc
    15001 agcttctaaa tctttacaat tttttacatt atcgattaat tgttcaagca ataattcttc
    15061 atcgattggt ttcaactaaa ccctctaaag tgattttatt ttctgcaatt tcatataaag
    15121 ctatatctgc aagtttattt ttatttttat caaagtctac caaaggggtt gctccatttg
    15181 ccaattgttc cgctcttttt gctaccacta aagaaaggcg atatctatca ttacccattt
    15241 tttccaaagc ttttgccgct acttcttcta ttcttttatc cataattttc tccttaatta
    15301 tttttaacga ttgaacaaag gctagtatca ccttgtatga ttttaagtaa attaccctct
    15361 tcaaacatat tacaaaccac aataggaagt ttgttatctt tagctaaagc tatagctgta
    15421 tcatccatca ctttaatatt atcttgcata gcctcatcat aacttaaagt atttaaaaat
    15481 actgcatcat caaattgttt tggatcttta tcataaactc cattaacttt tgtagctttt
    15541 attaccatat ctgcatcaat ttccacagct cttaaaatag ctgttgtatc tgtagtaaaa
    15601 taagggtttc cagtacctgc ggcaaaaacc acaacacgac ccttttctaa gtgtctttgc
    15661 gctcttctca taatataagt ttcacaaaat gcttccatct gaatggcgct ttgaacccta
    15721 acttcaagtc cagagctttc taaagcttct tgtatagcaa tagcattgat aaccgtagca
    15781 agcattccca tatgatctcc acttgtcctt ttaatcaatc cgcccttagc agcacttact
    15841 ccgcgaataa tattaccacc gcctataact atgcctactt ctatttgatt ttttataagt
    15901 tctttaatct ctgaagctat gaattttaaa atagaatttt ctataccaaa gccattttca
    15961 cctgctaaag cctctcctga aaattttact aaaactcttt ttctctcttg cattatttct
    16021 ccttatttaa cttgaaatta tattttaaat tccattaaat ttagctaatt taagctaatg
    16081 agttccaaag gattgatatg aaaatttttt tgagttactt caaaagtaag atcatttttt
    16141 attctaccca ctacggcacc ttttttaata ttcttaccaa ctttaatatt aggagcaatc
    16201 ttatctaaat gtgcgtatat tgtatgtatg ccattatcat gttcaacaat aacaactcga
    16261 gctaacatac tagtatcttt ggcaaaaact atttttccat ctagcacatt tttaacaact
    16321 gcatcgcttt tattgcttct taaaactaca ttctcgttaa aaattttaag attgtaaaca
    16381 ggatcaacat aatttccaaa tttttgcttc acagtaaaag aatccaatgg agctatggtt
    16441 ttttttcctg tgtaacgctt gactgaactt ccttgatagc ttgaacctaa ttgtcttatt
    16501 ttttgattat tttttactat tttagtatca tttttgtttg aatttgcatc ttctttatca
    16561 ttaataattt ttaattgatt taatgttttt ctaagctctt cttgctgagc ttgcaaatca
    16621 tcgagttttt ttgcatatat agctcgatct gttttttgtt tattaatttc gctaatttgt
    16681 ttttgtttta aactttgaag cttggctaat tgagcgttgt aatccttaag actttcatta
    16741 attttattaa tctgagcttg tttatcatca ataagcctgc ttactccctc ataatcttta
    16801 gaaattttaa aaatttcttc atttaaaact ttgtttaaac ttcctaaaat ttcaaaagcc
    16861 ataaaacttt cttcactttc aatatagcct tgagggatag gtaaatcata agcaaaatct
    16921 ttggccatta aagatataag cttaccttcc atatttgatt tacttttaag caaatcttca
    16981 ttttggcttg taagggtgtt taactcttga ttttgagcct tagcacttgc ttcaagctta
    17041 gaagtttgtg aatttaagct ttcaatttgc aaacttagat ctttcaaact tttttcacca
    17101 tttaaaatgt cgctagccaa atcttcaagt tttttattta actgttcttg tatgcgttta
    17161 ttttcttcta aactttttgt tttttcattt atagcgtttg ctaaacttat atcaacaaac
    17221 aaaaaaaaac aaaaaaagat aagaatattt tttctcatct tttaacctta aacataaccg
    17281 tatttacaca caacaagcaa ataaacaaag tagctaaaaa aattaaagtc aaatgtaaaa
    17341 taaaattaat aggtggaaaa ataatatcta cagcctttaa actttcttgg ataatagaaa
    17401 gatcaaaaat ttgggtaaaa aaggcaagta aaataacaaa agcaataaaa caatcaacca
    17461 caaccacctt ataaagcata aaagatctaa accaaaacgg agctccaaat aaacacataa
    17521 tttcaatacg atcggtatgt tcataaagcc aaattctcat ctgttttaaa aacaaaacaa
    17581 aggcaagtaa aataatgata aacaaaaata accaaaaaac aaatttcatc aaaataagca
    17641 aagagtatat cttatcatgg gttttggaaa aagtttcaac cttactaaca cctacaatat
    17701 ttaaaagttg atttttaatc gaatttagtt cattttgatc gggtaaagaa tttaatttta
    17761 aagtataaaa ttttggcaga gaatctttta aaactttcaa attcttttca gaaacatcat
    17821 ttttcaaacg atcgattaaa tccttaggat ctaaagattc aagtccagca aaaaatggta
    17881 cttttgtttt tactacattc tgatcaagtt cagttttgct gacaactata atattataat
    17941 ctttattaac aagttcttca taatgcttta aagttgcatt tgtaatcaaa ataaattcaa
    18001 aagcaaacat cataaaaagt aaaggtaaaa ttaaagataa atgtgtttta aaaaatttca
    18061 ttcatttttc cattttctat attaaaacga cgataatcca ctcttaaatt actaggaatt
    18121 ctatgtgtta ccactataac acaagttcct aaaagctctc tagcagattt taaaagagtc
    18181 catataatat cagaagaata ctcgtccaaa tttcccgttg gctcatcgca aagcaaaagc
    18241 tttggattat gagctaaagc cctagccata gcgacgcgtt gttgctcacc accgctaagt
    18301 tgattaggca atttatctgc tttaaaagtt aaatttacat gctttaaaag cttagcagct
    18361 tgatcatggc atactttttt gctataacct ttaatcatta aaggcaacat aacatttttt
    18421 tcaacactat attcttgtac aagtttataa tcttgaaaaa taatccctat tctttgacgc
    18481 aattttaaaa gttctaaatt tccaatttta ttcatcaaag atccacatac ttcaagctta
    18541 ccagaaatag gttctaaatc tccataaaaa gactttaaaa gcgtactctt accactccca
    18601 cttttacccg taataaaaac aaaatcatca tccttaaaag caaaactcgc ttctttaata
    18661 actaattcat cataacctaa agtaagttta tttgcttgga ttaaattagg catccttttt
    18721 ccttaatttc cctttttaaa tttttaaatt atgctttatt tttgcttaat tttcaagaaa
    18781 aattatattt taaactgaac ttttaaaatt tcttttaatt catttatcgc tttaatattt
    18841 tcttgaattt taaatggttc tttaaaaaca aaatcaatcg ttttatcaag atgtaaataa
    18901 caatgttcag gcttattaaa agctccaaaa gcaaccttta aaagcaaatt ctcatcttgt
    18961 ttatagatgc tttcaaaatg caagaaaaaa tcatcttttt ttatagtaat atttttaaaa
    19021 ttctgctcta tttttttcaa atcctcttta gaaaattcaa ccgatgagag attaaattca
    19081 tttaactcat agtttttaca ctcttggtta aaattccaca cccaaagatc atatatattt
    19141 ttttcttgct ttttccatct atcttcatat ttgcttgaaa tttctaaatt ttcatttttt
    19201 ctaagactaa attttggagc aggaaaagtc aaaaattgtt ctagagtaaa attaaaatac
    19261 tcaaaactat ctgttctaag ctcaaaacga ccattttggg ttaaaaccct agcacattct
    19321 ttgcaaaaat ctttcccaat aactcgccta tgaggctttt tatcccaagg aacaggaaaa
    19381 tgtagaaaaa tcttttcaac tgattttgat tttaatacac tcaataacaa tctcgcatca
    19441 ctttggatta gcaaaatatt atttacattt tgcactttag caagtttagc tacttgagtt
    19501 aaagctgggt tgtaaatttc cacccctaaa attaaaacat ttggattttc ttttgcttga
    19561 taaagcaaat gtcttcctga tccaaagcct atttctatat aaattttacc ttgaagctta
    19621 gacaaaagct catcaaaatt atcaacgata aatggtgttt tttcaattaa agcattgttt
    19681 ttaagtccaa aagcttcatt gataatatcc tcacaaaaac cttctttaaa gatttttaaa
    19741 gccttttgca aataacctat tttagaaggt tttgtatgtt tatcgccttt aatcacaaaa
    19801 ccattttgtg cttttttaat ctgcagaaag aaactctctt cttgaacctt tgtataaata
    19861 agactaacat tatcattctt agcaagccaa agaaattcaa catcatcctt gctataaggt
    19921 agatttattt ctttgatctt tttgctttta aaatttggca ctactgaact gccttaactt
    19981 tgcttgaagg ttctgaacga agcccagccg aatcaatagc aataacttca taactatatt
    20041 ccacccctgg taaagctttt acatctttta atcgcttttc tttaatgcct ttaaaaacag
    20101 cattttgctc cccgccatag cgtcttactt catactcaac agctctagta tcattatcgc
    20161 tccattctaa atttatccct tcgcttgtgc tttgagccaa aataatacta ggagccaaag
    20221 ggttacctaa agttttacct tctacaccat cttttggcat aggactttca agaccatctt
    20281 tatccaccat tgttacttta taatacttgc ttttacctgc tccttctact atatcctcat
    20341 aagaattttt atcagtcttt gccaaaacac taaaaggaag gaagcttgag cttgtagaat
    20401 aaactttata ataagaaaaa tcttcatatg taggagcatc ccaagttaaa atgattttat
    20461 tagaaccatc tgtgctagca cttaaatgct caacttgagg aggcaaagcc ttgcttgtag
    20521 aacttacaac ttgacttggt tcactcttta tcccattaaa actcacagca atgattctat
    20581 agcttgaatt ttcattaggt tttaaatcac tatcgatgta ttcagcgttt aaacgatttt
    20641 ttacttctgc aattttttta aattctttat catcaccttt agttctttca ataatataag
    20701 aatcaactct aaaatcagga tgcggacgcc aaataagttt aatacgatta ggcaaattag
    20761 tcacagcttg aacaaaagga acagcttcaa gtcttggagc tgtgctcact tctataacct
    20821 tgccatcttc tgaaatttgt ccttgctcat taaagctttt catcatataa cgatacttag
    20881 taccaggctc taatttagta tctacataat gagtttgaaa cttatcttta atagtgccta
    20941 caagtttaaa atcaggattt tcatcactag aacgatataa ataaaatcct ttaatatttt
    21001 cattatataa aggctcccat tcaaaagcaa tattactcat atcgctaaga ctttttaaac
    21061 tttcaacctt tggcaagctt tcatttacag caggctcttt acttgaagct agcgaattca
    21121 tttgcgaaac actacaagcg ctaagcaaaa gagttaaaaa actcaagtaa aaacccaagc
    21181 gaaatctttt catcattctc tcctaaatta atttgtttaa acataatatt tttaaaatct
    21241 tccatcaaag gtgctttaac aaaaatttgc tctttggttt ttggatggat aaaatacaaa
    21301 aaataagcat gcaacattat cctacaatca tacttaccct tataaccata caaactatca
    21361 cctaaaatat ggcgatttaa actagccaaa tgcgctctaa tttgatgagt tcttcctgta
    21421 aaaagcttag cagccatcaa agttaaattt tcagttttta ctatatttat aaaagctgat
    21481 tttgcgtttt tactgaattt attttcctta tctatggcta tttttttaat agcattagaa
    21541 ggcgaacgca ttaaaaattt ttctactata attttatctt cttttagtgg caaatcaatt
    21601 aacgcaaggt aaattcttcc catgctttta tctgcaagct gttcgcttaa tttttgatgg
    21661 gtgaaattat ttttcgctat cagtatagct ccgcttgtat ctttatctaa tctatggaca
    21721 agaccagctc ttatctctcc tcctaaattt gataaagtat attttttttc tattaaccaa
    21781 tccaccaaag tggcattttt aacgctactt gctccatgaa cgactaaatt tgaaggttta
    21841 tttaaaacaa gcaagtcttc atcttcgtat aacacatcaa tatcaaaatc cacttcaaac
    21901 tgaggtttta tctcattgca aagctttaaa cttgcaatag aaataatatc accattttta
    21961 agcttaaatg aatttttatc ttgaatttta tcattaacct gtacacaatc tttttctata
    22021 agtaaagcaa cttgattgcg actttggttt aattttttag ccaaaaatac atcaagcctt
    22081 gaattttcat ctactaaaaa agtttgcatt ttttccttag aagttttgat aaatttaaaa
    22141 ttttagttta taattatagc tttatattac caactgaagg caaattttgt ttagattaga
    22201 tagaagaatt ttaactcatt ttgactatat gcaacccatt ttatttttac ccataattct
    22261 tatttcattt ttcttaatct ttgaagctaa tcctttttta gcagaaaaac agtttgttta
    22321 tgcctgtgtg ggattgtttg cttttatggt ttttttcttc tttcccataa ggaaatttat
    22381 ttggattatt cctgttgctt attggattaa tattttttta ttgctaagcg tagatatttt
    22441 tggggttgaa aaattaggtg ctaaaagatg gcttgaaatt ccttttactc actttactat
    22501 acaaccttct gaaattttta aacctagttt tattttaatg cttgcctatc ttatttatca
    22561 aaatcctcct ccaaaaaatg gatacaagct taaacaattc atcaaactta gcttttacat
    22621 catcttgcct tttttgctaa ttgcaaaaga acctgattta ggaagtgcta tggttttact
    22681 acttgttggt tttggagtgc tttttatcat gggaattcat tataaaattt ggttaagtat
    22741 tgttatagct ataagtgtta gctctcctat tatttataca catcttttaa aaccctacca
    22801 aaagcaaaga attcatgatt ttatttcaga aaaaccaagt tatcaagtag cccaatcaat
    22861 gatagctatt ggaaatggtg gtttaaccgg aaaatctcaa gatgaagcta cgcaaactca
    22921 ttttaaattt ttacctattt caactagtga ttttattttc gcttacatga tagaaagatt
    22981 tggatttatt gggggattga cattaattat attttatatt ttacttattt ttcatctact
    23041 tagtttaaat tataaactta aagatgatta ttttgctaga gttgctatta attgtgttgc
    23101 attatttatt tttatttatg cggcagtaaa tatttcaatg actataggtt ttgcaccagt
    23161 agttgggatc cctttgcctt tttttagtta tggtggaagt tcttttacta tttttatgat
    23221 tttttttgga attttacagc atttaatcac ttttagatat ttttggacgg atataaaggc
    23281 taaataaaat atttttaagc attaataaga tataatttta tcttttaatt caacttaggc
    23341 ggatttatag ctcagttggt tagagcaacc ggctcataac cggttggtcg caggttcgag
    23401 tcctgctaaa tccaccattc tacatataag ctatagactc tttctttaaa aaataatttt
    23461 tagttcttta aatatttcaa tcttatataa aaaagtatgt gatgtgattt tctgaaagat
    23521 aaagtggtgg ttagaggcag aatcgaactg ccgacacgca gattttcagt ctgctgctct
    23581 accgactgag ctatccaacc acaatgattt gataaattaa aaatgtaatt gtatcttttt
    23641 ttctttaatt taagtttaaa tacaaaaata aaattttatt tcccttaaag ttttaataag
    23701 atagaatacc cgctttagat cattatcaaa tggaaatttt ttgaaacaat ttggactaga
    23761 tagacgaact tttaaaattt tactagctgg ttatattatt attgcattgt ttggggcttt
    23821 attactacat tcaagctggg cacatacaac tcctattgat tttttggatg ccttttttac
    23881 aagcacatct gctgttagta tgacaggatt agtagttaag aacactgcgg ttgattttac
    23941 cttagcaggg caaattatta tcttagcttt ggtgcaaatt ggaggcttgg gatatatggg
    24001 tataggttta ttcgtttata tactcatacg caaaaaagtt ggttttagtg caagaaattt
    24061 actaaaagag tctttatttt atccatcaat ggatggttta tttaaatttt ttaaaaaggt
    24121 tttgctgttc atttttacta tagaattgat aggtgctata cttcttacca tgcgttttgc
    24181 ccttgaaatg aattttaaaa aagctttatg gtttggaatt tttcattcta ttagcgcttt
    24241 taataattct ggatttacta tatttgaaca tgggcttata gcttataaac atgatatagc
    24301 aattaatctt attatcactt ctttgattat tattggaggg cttggatatt ttgttttggt
    24361 tgaattatac ttttttcaaa gaaaaaaatt gcaaaattta agcctacata caaaaatggt
    24421 tgttgttgca agtatttttc ttattttctc ttcaacgctt attatttttg cttttgaata
    24481 ctcaaatcct caaactatag gacatttttc atttttcgat aaaattttaa gctcatattt
    24541 tatcgctatt aattaccgca cagcaggatt taacacctta gatatgggac atttgcatga
    24601 tgcaagctta ttttttggat cattgtttat ggttattggt ggtgcaccag gtggaacagc
    24661 tgggggtatg aaagtaacaa ctgtaatggt tttattgctc tatgcttatt ggagtatccg
    24721 cgatggaaga gttagaattt ttggacatga aattccaaga gaaactatat ctaaagcttt
    24781 tattatagct gtaggttcag ctgtttatat agtaatagct gttattttgc tttccttgct
    24841 agagtcaaaa tttgatttta tagccttgct ttttgaaact tcttcagctt ttgcaactgt
    24901 aggaatttca gtaggaaatg gtggaacttt atctttatgc gctttgttta gtgatcctag
    24961 caaggtgatt atcatcatta tgatgctaag tggtaggata ggtgtttttg cttttttact
    25021 ctcggtattc aaacaagaca aagctattca tttaaaattc cctgaaggaa aggttaattt
    25081 ataaaggtaa aatcgtgaaa aatcttaatt atggaatcat aggacttgga aaatttggct
    25141 cagttgtagc agatgaactc attgctggag gtcatactgt tatcgttgcg gataaagatg
    25201 aggaagcttt aaaaagtata caaaatcctc caagctatgc ttatatttta gattctacaa
    25261 atatttcagc cctaaaagaa gcaggctttc atgatgttga agttgttatt gttagcatag
    25321 gagaaaatgt tgaaaaatca atccttactc ttatggcgct taaagatata ggtgttaaaa
    25381 atatcattgc taaagcaacc tctaatatcc atggtcaaat tctttctaag ttaggtgcaa
    25441 caaaggttat ttatcctgaa aaagaaagtg ctaaaagact agtaaaagaa tttttaacta
    25501 aagatgctga ttatgaagtt tttgatcttt cagcaaatac tatacgagct attaagatca
    25561 atatagatga aaaattagca ggaaattctt taaaacatgt agcacaaaat atgaaagtga
    25621 tttcttataa aaaattaaat agcgactggg aaatactacc tgatttagaa accacgacag
    25681 tttatagtgg agatgttgta atactccttg gaacagttaa agagcttaga gaatttgaac
    25741 attaagcaag atttaaagcc ttacaagcct ttacaaaacg ctttaaggct gttttttctt
    25801 tggtagaaat tttatgatat ataacttcat ctaaataata tctaacatct tttatatcta
    25861 aatcccttgt tttggcataa ttttgcagta tataataagg aattttaatc tttgtttctg
    25921 gaaatttttt caaaatttgt ttatataaag cttttttttg cacacaagaa aatctagcaa
    25981 aaacaaaagg caatcctgtt ttttcgtgcc attttgcaca taaatcgata tatctagaag
    26041 gatcttttag ataaagcttt aaagccttat cacctataat tacttttcca tcttgtttta
    26101 atactttagc taaagcattt gaagttgctg aacttggatc tttggcattt gatgtatttt
    26161 tttctactaa aacacttaaa actcttttat tagcacaaat acccaaatct aaatttttat
    26221 atttttttct agcactttct atgcttgaaa tgatagctgc atcaattctt ctataaaata
    26281 aatctttatt tagcttactt ggaactcctt ttttatactc catacttgct ttataaccat
    26341 taggtagggg atatttctta agatatatat gtaaaggtaa aagattaata taatcaattt
    26401 ttccaaaaat catctctctt aaagagtgtt aaacactcta tctcctgcat ctccaagccc
    26461 tgggataata taaccttttt catttaaacc ttcatcaata caagccacaa aaacttctac
    26521 atcatcatgc atttggctaa attttttcaa accttgtgga gcagcaagta tggatataaa
    26581 ttttattttt ttaactcctt ggctttttaa aaaattacaa gcctctatag cagtcccacc
    26641 tgtagcaaac ataggatcta taacaatagc agtgcgtttt tttgcatctt tgggaagttt
    26701 ttgaaaataa aaatccgcct ttaaagtttc ttcatttctc acaaatccca aaaatccaac
    26761 acttgcatca ggaatcatct taaaaacgct ttcaagcatt cctaatgcag ctcttaaaat
    26821 aggacaaatc ataatctttt catcaagttt ttttactgta gttttttgta taggtgttga
    26881 aatttcaatt tcttttaaag aaaaatcttt gctcgcttca aaaagcaaaa aagatgaaat
    26941 ttcatcgatt aacatacgaa attgaaaggg ctttgtctct ttagccctta aaattcctaa
    27001 tttatgttcg atcaatggat gattgataca atgaatattt ttcattttaa gctttcaaaa
    27061 taagctttct catcaaaatt tttcacctta gccacaccat cttttaccgc agctgctgct
    27121 acagctgtac ttactgcagc ttttactctt tcatcaaaag gttttggtat aacataatct
    27181 cttccaaatt ctaaagtgct taaattataa gcttttttaa ctgcatcact tacaggaagt
    27241 tttgcaagat ctgctaatgc tttagcagca gctactttca tattttcagt gattttactt
    27301 gcacgcacat ctaaagcccc acggaaaata aaaggaaaac ctaaaacatt attgatttga
    27361 ttagcataat cacttcttcc tgttcctaca atcgcatctt ttctaagtct aactacatct
    27421 tcaggcatca cttcaggaat aggatttgcc aaagcaaaaa tcacaggatc ttttgccatg
    27481 cttaaaacca tttcatcatc aagaattttt ggcgcactaa gccctaggaa aacatcagcc
    27541 ccttttaaaa cttcttttaa agtcttttcc ttagaatcaa cagcaaattc aagtttttga
    27601 ggagttaaat catttctatc tttagaaatc actcctttac tatctactaa aataatattt
    27661 tcaaccccta aatttctata catcttagca cttgctatac ctgcggcacc tgcgccactt
    27721 acaaccacct taatgtcttt aaatttttta ccgcttatct ccatagcatt cataagccct
    27781 gcagttgaaa taatagccgt tccatgctga tcatcatgca ttacaggaat tcctaaatct
    27841 tgcaaagccg cttcgatttc aaaacatttt ggcgcagcta tatcttctaa atttatcccg
    27901 cccacagtcg gagccaaagc cttgcaaaaa tttacaatct cttccgcact atgaacatta
    27961 atttctatat cataagcatt gacatttgca aattttttaa acaaacaagc cttaccttcc
    28021 ataacaggtt ttgaagcctg tgctcctatg tttccaagtc ctaaaacagc agaaccatcg
    28081 ctaactatag ctactaaatt agccttattt gtataagtat aagcaagctc attatcttta
    28141 gcgatttcaa ggcaaggttc tgcaactcct gggctatacg ccaaagatag atcataactt
    28201 gtagccattg gcttacttgg tacaatatca attttcccac ctaaatggta ttttaaagct
    28261 tcttctttta aattcatttt attttcctct aacttttaaa aaattttcta ttcttttttt
    28321 acactcatca acccctaaaa attctaatac ttcaaaaata ctaggactta ccgcactccc
    28381 tgttaaagct atgcgtatag gctgagccaa atcttttaac tttgcttctt ttttttctaa
    28441 aaaatcattt gtaaaatctt caaaatcttt acctgttttt tgatctttaa gtgtattagc
    28501 aaatgcctgg agcaattcta aattattttc gttaacaaat ttttgcactg cattttcatc
    28561 ataattttgc ggtgcattaa ctatgctttt tgcaccattg ataatatcat gcaaggtttt
    28621 tgcacgctct cttaataaat caagtaaaaa tcctgccttt ccataaacag ataaatcaaa
    28681 gccgagatct ttaagctgac ggttaatctc ttcaaaaggt aaagttttaa tataatgagc
    28741 attcaaccat tcaagctttt tagcattata acaagatgcg cttttattga tatgataagg
    28801 atcaaaaagt tttttcaaat cttctagtga aaaaacctca tcatcaccat gactccaacc
    28861 taaacgcaca agaaaattaa gcaaagcttg aggtaaaatt cccatttctt tgtattccat
    28921 aacatcagtt gccccatgtc tttttgaaag ctttttacca tcttctccat gtatcatagc
    28981 cacatgaaaa aatttaggaa ttttaaaacc caatgcctca taaagcacaa tttgtttagg
    29041 agtatttgaa agatgatcat ccccacgaat cacatcactt acccccatta aagcatcatc
    29101 aataacaaca gtaaaattat aagttggagt tccatcactt cttgcaatga taaaatcatc
    29161 cattatatcc tctgctttaa attttacctc gcctttaacc ccatcttcaa aaacaatctc
    29221 gccgctttga ggtgctttaa tacgtacaac aggttctata ccctgaggtg gcgtgccttt
    29281 aaattctcta tatcttccat catatcttgg gcgctctttg gcggcttctt gcttggcgcg
    29341 caattcttct aattcttctt tactcatata acaataatac gctttacctt catctaaaag
    29401 ctttttgaca tattctttat aaagatcaaa acgctctgat tggtaagtta cttctccatc
    29461 atgttctaaa ccgcaccatt taaaagcttc gataattgct ttagtagctt ctttggaatt
    29521 tctttttaaa tccgtatctt caatacgaag taaaaaattt ccaccatttt ttctagcgta
    29581 taaataatta taaagagctg ttctaagtcc acctatgtgc aaataccctg ttgggcttgg
    29641 agcaaaacgc gttgtaagtt tttcgtgcat tttttgcctt ttcttaaatt tttattgata
    29701 taatgcgata tttatactta aataaaggtt tgaaatgaaa aaaattttat taagttttgc
    29761 attttttgca agtttagcta gtgcaaatac cattaatgct atagctgtag ttgtggataa
    29821 agagcctatc acaacttatg atatagatca aactatgaaa gtgcttaaaa ttgatagaaa
    29881 taaagcttta ggtgtactca tcaatgaaaa aatggaaatt tcacaaatga aacaactggg
    29941 tattgtagtc aatgatctag agcttgatga tgctataaat aaaatgcttg ctcaaaacaa
    30001 aaccacttta aatgctttca aaacaaattt aaaatccaaa aatcaaagct atgaacaatt
    30061 tcgtgtaaat tttaaaaaag atttagaaaa aagaaaactt tatgaaaaaa tcgcaagtat
    30121 ggcaaaaact gattttagtg atgatggagc aaaaaaattt ttcgaacaaa ataaagataa
    30181 attcactttt tatacacaaa ttaatacaaa tatttattta tcaaacaatc ctcaaacttt
    30241 agaaaatatc aaaaatacaa aaaaaacaat ccttaaacca cagaatacat ctttaaacac
    30301 aagcaatgcc gatccaagac ttttagggct tttatcacaa attcctgttg gaggcttttc
    30361 ccctgtttta aatggaaaaa atggctatga actctatgaa gttaaaagca aagatggggc
    30421 acaaactcct gaatatgaac aagttaaaaa tgaagtttta aacgcttatg taagcgaaca
    30481 aagacaaaat ttcatacagg attattttga taaactccgc tctaaaatca atatagaata
    30541 tttaagataa aaattacaat taaaatttcc ctttaattag ggaaatttta atgtcttgca
    30601 agataatttg tatcgtagtt attattaata aaatcaggat tttccatcat agaaagatga
    30661 aaatctttgg ttgtttttat cccacttata agcaactcat ctaaagctac tttcattttt
    30721 gcaatagctt tattacgatc ttctgcccaa actacaagtt tgcctatcat agaatcataa
    30781 taaggaggca cgctatagtc ttgataacaa tgactttcca ttctgacatt gcgtcctgcg
    30841 ggtggaatgt atttagtaat cttacctgga cttggcaaga aagttttgga atcttcggcc
    30901 gtgattctac attctataga atgcccattt aatttaatac tttcttgaga tggtaaagca
    30961 taaccttctg ctactttaat catttgttct atgatatcaa tcccacttac catttcactt
    31021 acacagtgtt caacttgcaa acgcgtattc atttctataa aataaaaatc caaattttta
    31081 tctaccaaaa actcaaaagt tcccgcacct tcatatccta tagctttagc tgccttaata
    31141 gcagtttcat gaagtctagt gcgtgttttt tcatcaagca aaatcgcagg ggattcttct
    31201 ataagttttt gatggcgtct ttgcatagaa caatctcttt cgcccacatg aatcacattg
    31261 ccaaaactat ctcctataac ctgcacttct atatggcgtg gattttgtat gtatttttcc
    31321 atatacatag ttccatcgcc aaatgctgtc atagcctcgc tttcagccga ccaatacgct
    31381 ttttcaagat ctttttcatt ttcaaccaca cgcataccac gaccaccgcc acctgcagct
    31441 gcttttaaaa tcacaggata acctatttct ttggcaagtt ttttagctgc ttcagctcct
    31501 gccaaagccc catcgcttcc tgggatcaca ggtacgcctg ctctttgcat gacttgtttt
    31561 gcttttgatt tatcactcat taaattcata gcttccacag aaggacctat aaatttgatg
    31621 ttatgtttag cacaaatttc aacaaaattt tgattttcac ttaaaaatcc gtatcctgga
    31681 aaaatcgcat ctgcttcagc aatttcagct gctgtaataa tagctgggat atttaaatag
    31741 ctttcagaac ttcttgcttt gcctatacaa atgcttgcat cagcgtattt taaatacaaa
    31801 gcatctttat ctgcttcaga gtacacacaa attgcttttt tacccatttc tttaatcgtt
    31861 cttaaagcac gcagtgctat ttctccacga ttagcaatta atatgctttt aatttccatt
    31921 ttataatttc tccaccgcaa ataaaggcat tccaaattct acaggctgac catcagcaac
    31981 taaaatttca gcgatcctac aatcaaattc cgcttcaatt tcattcatga ttttcatcgc
    32041 ttcgataata gctatagtat cgcctttttt aaccgtacta cctactttta caaaaggtgc
    32101 tgcacctgga cttggagctt gatagaaagt tcctaccata gggctgttta tacttggttt
    32161 gtttgatttt acactttgac taggttgagc ttcgtttaca acgcttacat tgataggttg
    32221 tggagctgga actggaggac aaacaggggc tggaacatcg cagcacatat ctctttcaag
    32281 ttctatttca aaaccatctt gttctttgat cttaatttta ctaatatttg cttcagcaaa
    32341 aaggtttact aactctttaa tttcttcttt tgtcataaaa ttctcctaca aaatttaaga
    32401 acttaacctt gtattatata aaaaaacttg aaatttaact ttaaaaaaga aaaaaatcat
    32461 aaaaaatata gattttttag gttataatcc ttacaaacaa ttacaaatat taaaaaggtt
    32521 aaaaatgggc ttaaaagcgg ataattggat aagaaaaatg gcattagaac acaagatgat
    32581 cgaaccattt tgcgaagcaa atataggaaa aggtgtggta agctatggac tttcaagcta
    32641 tggttatgat atacgtgtag ggcgtgagtt taaaattttt accaatgtta attcaactgt
    32701 agtggatcca aaaaatttcg tagaagaaaa tgtagtagat tttgaaggcg atgtatgtat
    32761 agttcctgca aattcttttg ccctagccag aactatagag tattttaaaa tgcctgataa
    32821 tgtcttagct atttgtcttg gcaaaagcac ttatgcaaga tgtggcatca tcgtcaatgt
    32881 tacccctttt gaaccaggtt ttgaaggaca tatcactata gaaatttcaa atactacgcc
    32941 tttacctgca aaaatttatg ccaatgaagg tatagcgcaa gtgttgtttt tgcaaggcga
    33001 tgaaaaatgt gacaccactt ataaagataa aaaaggcaag tatcaagccc aaactggcat
    33061 taccttacca agaattttaa aataggaaca cttattgctt taatttaaaa aaacttaagc
    33121 aaaggaaggc aaaatgttta acaaaaaaaa tatcttaatc acgggcggaa caggctcttt
    33181 tggaaaaact tatactaagg ttttgctaga aaactataaa cctaataaga ttatcattta
    33241 ttctcgtgat gagctcaaac aatttgaaat ggcaagcgtt tttaatgctc cttgtatgcg
    33301 ttatttcata ggagatgtaa gagataaaga gcgtttaagt gctgctatgc gtgatgtgga
    33361 ttttgttata catgctgctg caatgaagca tgtacctatt gctgaatata accctatgga
    33421 atgtataaaa acaaacattc acggtgcgca aaatgtcatc gacgcttgtt ttgaaaatgg
    33481 agttaaaaaa tgtatcgctc ttagcacaga caaggcttgc aatcctgtaa atttatacgg
    33541 cgcaaccaaa cttgcaagcg acaagctttt tgtcgctgca aacaatatag caggtaacaa
    33601 acaaacacgc tttggtgtta caagatatgg caatgttgta ggttcaagag gatcggtagt
    33661 acctttcttt aaaaaactca tcagcgaagg agctaaagaa cttcctatca ccgatacaag
    33721 aatgactcgt ttttggatca gccttgaaga tggagtgaaa tttgtactga gcaattttga
    33781 aagaatgcac ggaggagaaa ttttcatccc taaaattcct tcgatgaaaa tcaccgatct
    33841 agctcatgct ttagctcctc atttaagtca taaaatcata ggtatcagag caggagaaaa
    33901 actacatgaa atcatgattt caagcgatga tagtcattta acctatgaat ttgaaaacta
    33961 ctatgccata agccctagca ttaaacttgt agataaagat aatgacttta gtatcaatgc
    34021 cctaggcgaa aaaggacaaa aggtaaaaga tggtttttct tatagttcgg ataataatcc
    34081 tttatgggca agcgaaaaag aacttttaga aatcatcaat cacaccgaag gtttttaaaa
    34141 tgcttactta ttctcatcaa aacatcgatc aaagcgatat agatgcgctt acaaaagctt
    34201 taaaagatga aattttaaca gggggtaaaa aggtagatga atttgaagaa gccctttgtg
    34261 aatatgtggg cgtaaaacac gcttgtgtat taaactcagc cacttcagcc cttcatcttg
    34321 cctatacagc actaggcatc aaagaaaaaa tcgttttaac cactccttta accttcgctg
    34381 ctacggctaa tgcagcctta atagctggag ctaaggtaga gtttatcgac attaaaaacg
    34441 atggcaatat tgatgaaaaa aaactagaag caagactttt aaaagatagt aaaaatatag
    34501 gagctattag cgtggtggat tttgggggaa atagcgttga aatagatgaa atttcaagcc
    34561 ttgctaaaaa atacaatatc cctttaatcg atgatgcaag ccatgcttta ggtgccttat
    34621 ataaaagtga aaaagtagga aaaaaagccg atctttctat cttttctttt catcctgtta
    34681 aacccatcac tacttttgaa ggcggcgctg tggtgagtga taatgaagag cttatcacca
    34741 aaatcaagct tttaaaaagc catggtataa ttaaaaaaag gctttgggat agcgatatgg
    34801 tagaacttgg ctataattac cgcttaagcg atgttgcttg tgctttaggg ataaaccagc
    34861 ttaaaaaact cgatcacaat cttgaaaaaa gagaagaaat tgcaagtttt tatgataaag
    34921 aatttgaaaa aaatccttat ttttccacga taaaaatcaa aaattataaa aaaagctcaa
    34981 gacatttata ccctatcttg ctttttcctg aattttattg tcaaaaagaa gaactttttg
    35041 aaagcttact tcatgcagga attggcgtac aggtacatta taaaccaact tatgagttta
    35101 gtttttataa aaaactctta ggagaaatca gactccaaaa tgcggataat ttttacaaag
    35161 ccgagcttag cataccttgt catcaagaaa tgaatctaaa agatgcaaaa tttgtaaaag
    35221 atactttatt tagcattctt gaaaaagtta aaaagggata ttgtggataa gctagacttt
    35281 agaagtcaag attttaacca aactggaaag gctatgtatg aactagcttg tgaacttttt
    35341 cctatcccta ggagtatcac agggcaaggt tttagagcta gcttagaaat tttaaataaa
    35401 actctggggg ggggtatact caaatttcac tctatcaaaa gtggcacaaa ggtttttgac
    35461 tggatagtcc ctgatgaatg gaacgctaaa gaagcctata tcatcactcc agaaggagaa
    35521 aaaatttgtg attttaaaaa gcataattta caccttctaa attatagcga agctatcgat
    35581 aaagaaatcg aacttgaaga acttcaaaat catctttact ccatagaaga aatgctcgat
    35641 gctattcctt atgtaacgag ttattacaaa aggcgttggg gattttgtct cacgcataat
    35701 gaaagaaaaa aactcaaaaa aggcaaatac aaagtctata tcaatgcgaa acatgatgaa
    35761 aatggggttt tggattatgc tgattttatc ctacctagta cgcaaaattc aaaagatgaa
    35821 attttaattt caacctatct ttgtcatcct tccatggcaa ataatgagct tagtggtcct
    35881 gtggtggcta ttttcctagc aaaatggctt ttgagtttaa aagaaagaaa gtataattac
    35941 cgctttgtca tcattcctga aaccataggc tctatagtct atcttagcaa acatttagag
    36001 catttaaaaa aacatgttaa agcaggcttt gtgctttctt gcttaggtga tgatcatgct
    36061 tactcactca tacacacacc caaagaaaac actctaagcg ataaagttgc cttgcatacg
    36121 cttaaaaata aagaaaattt caaaactttt agttttttag atcgtggaag cgatgaaaga
    36181 caatacaatg ctccgcttgt aaatcttggc atagtaggag tatgtcgcac aagatactta
    36241 gaatacgaac aataccacac tagcaaagat gatctcaatt ttatctctga aaaaggctta
    36301 atgggtggac ttcaaagcat gcaagaaata attttaaatc tagaaatcaa cgccgtatat
    36361 gaaaacacca tagtatgcga acccaatctt ggcaaaagag ggctatatca tacccttagc
    36421 actgctaatg acattccttt ggcttgtaat tttctagctt actgcgatgg agagaatgat
    36481 atcatcgata tagccaatat cttaaatatg caagcttatg aatttaaaga acttttggaa
    36541 aaaataaaat tttatggact agtaaaatga aatatttttt agaacacaat gacaaaaaat
    36601 actccgataa agatttaata gatgcttttt atcaactagg tataaaaagg ggtgatattt
    36661 tatgcgtaca tacagagctt tttaactttg gcgtgccttt gctttctaga aatgaatttt
    36721 tacagactat actcaattgc ttttttgaag ttataggcaa agaaggcact ttgatcatgc
    36781 caacctttac ttatagtttt tgcaaaaatg aagtttatga caaaataaat tccaaaacaa
    36841 aaatgggagc attaaatgaa tattttcgca aacaaacagg agtaaaacgc acaaacgatc
    36901 ctatattttc ttttgctata aaaggagcaa aagaagaatt atttttaaaa gatacaacaa
    36961 gttgttttgg ggaaaattgt gtttatgaag ttttagccaa agagaatgga aaatatatga
    37021 catttggagg ccaaggacat acactaacac attatgcaga agaacaattt aatgtatttt
    37081 acagatatca taaaattttc tctggaattt taattgatga aaacaatata tcatacaata
    37141 aaaccattag ttattatgtt agaaaacttg acatatcttc tgagcccaat ttaattaaca
    37201 ttatcaatat tgttaataat actaaaaatt ttaaaaaaaa caattttgca ggagatcata
    37261 taaatattta caacgctaaa gaatatatag aaattttatg gaaaaaatta gatataaacc
    37321 aaacaattct aatagaaaat tatgatacaa tatattaatt ttcaacattc tcaagaaagt
    37381 ggtatacaat ggaaaaacaa ttttatgaaa ttttagaaaa tatacttgaa accaaagtag
    37441 atgaaaatac aaatttaagc atggaaaact gcaagaactg gacttcttta gctcatattg
    37501 atatcatcat gagtttagaa gaagaatttg aaatcaaatt taacaaagaa gatttaggtc
    37561 tcttaaaatc tcaaagcgct ttactagaaa aaattcaaac cctaaaggca gaaaaatgaa
    37621 agaaaatatt gaaaaattat ttcaagccat cgctcaaaaa aatcctatcc attctaaata
    37681 tcttaaaaaa attgaatttt cacaagaaga cgaagaagaa tttgataaat taatttctta
    37741 ttatattcaa gatggcatca gtataaaaga acaatgcgat tgttatttat tgatccttaa
    37801 cgatacttta gaagaaacaa aatttttcat agaaaatggg gcttatcgtt attctagctt
    37861 tgatgaagtt aaggataaag tttattttaa tgaaagctat atgaaacaat acatgatagg
    37921 cttagctctt tcttcttttg tttggatagc tcatattaaa gtgagaaagt atttttcaca
    37981 atatttaaaa aattttactc caaaaacaac ttattttgaa ataggccctg gccatggaga
    38041 atattttgca agagcagtta aaagtggtaa attttccgca ttttatggac ttgatatctc
    38101 tccaacaagt tgcgaactta ctcaaaaaat ggtaaaacaa caagtagggg gattgattac
    38161 aaaatgtgat tttttatgtc aagatttttt tacttatgat tttgataaaa aagctgattt
    38221 gatagtgatt ggagaagtgc tagaacacgt agaaaaacct cttgaattcc ttaaaagatc
    38281 taaagagctt cttagcgatg gaggggaaat ttttgcaact attcctatca atgctcctgc
    38341 tattgatcat atttatttat tttcccatcc tgatgaagtt aaagatttga tagaaaaatc
    38401 aggcttaaag cttaagactt atgaatgttt tatggcaaat gattatagtt tagaaaaagc
    38461 attgaaattt aaaaatgcta tcactatggc agtagtttta aatgcttaat acaacactca
    38521 atttacccat tcatcatata ggtgtggctt gtaaaaattt agaaaaagaa agggaatgtt
    38581 tttttaaact aggtttttat aaagaatcag aatttgtaga tgaaaaacaa ggggtaagag
    38641 gtgaatttat cattccttgt aatgaagcat ttccacagta tagatttgaa cttttgcaaa
    38701 atttaaacga taaaggccca ctagatagct atttgaaaaa taataccaaa atgtatcatt
    38761 tagcctatga aagtaaaaac atcacccaag atttaattct tttggaacaa caaggaggca
    38821 tttgcattgt tcctattatg caagcaagct attttgctaa actttgtttt atcatgatgc
    38881 caaataggct tttaatcgaa cttgtggagc taaaatgaat cttttttcac cccatttaaa
    38941 acgcaatgag cttataaaat tcgccaaaga attagacttt agcaaaagtc aagatcttct
    39001 tattaatgtc catagaaatc atgcttttga aggagtgcaa agtatcattg ctcctttttt
    39061 acattttgct aatttaaaag ctgagtttaa tttcagctct tatgatgata gcttgagttt
    39121 tgataatttt aaagaagcta atttagaact tttatggctg gatttaaccc gctataaaaa
    39181 taatgtgcaa aattttatag aagaaagact tttagaacta agaaaaattt cacaaaaccc
    39241 tattttagtt cttagtttag gagaatttaa aacagataaa aaaaatttaa attgtgaaat
    39301 ttttaacata gaaaaactca taaaagagta ttttgatgaa gaagatattt tagacctagc
    39361 taaagaagaa cttacaggct ctaagcttaa taataaagcc ttgatttttt tagcacaaat
    39421 tttaggactc agtctcatcc ctgcactcgt aaaacccgct cttaaagctc ttgtacttga
    39481 tcttgataat accttgtatc aaggaatttt aggtgaagag ggtatagata atcttaattt
    39541 aagtcctttg cacaaaacct tacaagaaaa aattaaaact tttaaaaaac aagggttttt
    39601 acttgcccta gcttcaaaaa atgaagaaaa agacgcaaaa aaactttttg aaataaggaa
    39661 agatttcatc ttacaatggg atgattttga tgttagaatg atcaattggg agccaaaggg
    39721 tgaaaatatc ttaaaaattg ctaaaaaatt taatataaat actaatgcca tgctttttat
    39781 agatgataat atcgccgagc ttgaaaatac caaatttaca ggcgttaaaa cacttttatg
    39841 cgatgaaaat atactttata aaatcaaact ttttcctaat cttttaaaac tttcaaatac
    39901 caaagaagat caaattcgtg ccaaagatat agcagccaat gctttaagag aagagcttaa
    39961 aagcttaagc gatgaagaat attttcaaaa tcttgaaatc agcttaaatt ttagcaaaaa
    40021 tgatctgcaa aatatccctc gcattagcga acttttaggc aaaaccaatc aatttatcgc
    40081 taattacaca cgcttaaatc aagaaaaagt cgcacaacac atgcaaaaag aactcattgt
    40141 aagtgtgagt atgagtgata aattaagcga tagtgggatt atcgctattt ttgttttttc
    40201 ttgtaaagaa ggaaatttat ttatcgatga tctttgcatt tcttgtaggg ctttaggtag
    40261 aaaacttgaa actagaatgt tttttaaagc ctttgaacta gctttacatt tctttgatct
    40321 taaaaacaat aatgcaaggc tttactatca aaaaggcgaa agaaatatgc catttttgag
    40381 ctttttagaa caaatttcta aagaaattga aaaaaactca gcccttgttt catttcaaaa
    40441 tttaaacttt aaaggactta taatccatga aaactagatt tgataaagcc aaaatttcag
    40501 gcatttgcgt aagcgtacct gaacataaaa tttgcattga tgatgagtta gaaagcgttt
    40561 tttcaaatga tattaaaacc cttaaaagaa tgaaaaaagt cataggctta aaaacacgtt
    40621 atatttgtga taaaaacact tgtgtaagcg atcttggcaa acacgcagcc aatacacttt
    40681 tacaaggttt aaatatagat aaaaatagtc ttgatgcact catcgtagta actcaaagtc
    40741 ttgatttttt catgccttct acggcttgtt atttacatca gcttttaaat ttaagctcta
    40801 aaaccatagc ttttgatttg gggcaagctt gtgcagggta tttatacggc ttatttgtcg
    40861 ctcattcttt aatacaaagt ggcttaggta aaattttgct cgtttgtggg gatactttaa
    40921 gcaaattcat ccatcctaaa aatatgaatt tagccccaat ttttggcgat ggagtaagtg
    40981 caactttgat tgaaaaaacg gattttaatg aagccttttt tgaacttgga agcgatggaa
    41041 gacattttga taaactcatc attccaaaag gtgcgatgag aatacctaaa gcagatattt
    41101 ttaacgatga ttcgctcatg caaactgagg agtttagaca attagaaaac ctttacatgg
    41161 acggagcaaa tatttttaat atggctttag aatgcgaacc taaaagcttt aaagaaattt
    41221 tagaattttc caaggtagaa gaaaaagaca ttgcttttca tctttttcat caatctaatg
    41281 cgtatttggt tgattgtatt aaagaagagt taaaacttaa tgatgataaa gttcctaatt
    41341 tcatcatgga aaaatacgct aatttaagcg cttgttcact acctgctcta ctttgcgaac
    41401 tagatactcc aaaagaattt aaagcgagtt taagtgcttt tggtgcaggg cttagctggg
    41461 gaagtgcggt gctaaatttc aaggatttat acacaaaaga tattttaatt tacacaaagg
    41521 agaaataatg acaaaaactg aatttttaga agagcttaaa gaagctatgc atagagatga
    41581 agacttaaat gaagatatgc tacttgatga tatagacgag tgggatagtt tggcttttgt
    41641 atctgtgatg gtgctttata aaaatctttt tgctttaaaa atcacagccg aggacttgaa
    41701 aaattgtcaa aaagtgagtg atttaatcga tttagcaaag cttgattaaa acctttaagg
    41761 ttttaatctt ttatcgttaa ttcaaattta tctcccacat ctttaaaagt aaacacttta
    41821 tttccacaag gataagagat ggaattttct tgcattaaag attttctttt ttgcaatttt
    41881 tcaagcatta aaggaagttc ttttctaaat aaggctttat cagcaatcct cataccatga
    41941 tttaagtcct ttataaatct tccatcaatc tcgctttcat cttttattaa atgtaaagtg
    42001 gcgtcatatc ctagctcttt atatgctaaa aaagagtttg tttatctttt gctgtattaa
    42061 atggatcttt taaactatga taagatacta aaataatatt tttgttaata ttagcttgta
    42121 tagttaaatg ggaagaattt aacaaagaac gaatcatata attttcatta gtaaaaaaat
    42181 aagataatct ttcatcttct ctagtccagt acgttttaat aaacatgcct accaatttat
    42241 ttaaatcact aaaaaaattc gggtctactt aaatcttttc ctattataca ttccaataat
    42301 ggcaaaacag ttcctgaatt atcaatcacg ccatccacat accaaggagc tatttttgct
    42361 atgagtaaag ataggtatcc tccataagac ccccccccca taaatttttg gtaaatctgc
    42421 aaattctgga aaacgtttaa ctaaatcttt taaagcattg atatgatcaa tagctgccat
    42481 aatgccatag ttttgataat ctccattggg tgggataaaa gttgaagtaa atttcgcttg
    42541 ataattttgc gctaattttc cttgtgattt taaagtaata atatgctgat taagcaattc
    42601 ataatacttg gtagaatttt tacaatcaag attctgtgga ttaatgccaa aatctaacaa
    42661 aatcttagat agacttaaca aatcctcctc catgaagcta atagaagcac tatatttttt
    42721 attatttgat attcttgcac aaaaacaatg ataaaaaaca tgcaccgcta caacgttaaa
    42781 atttttagca atatattccc tatcaaaatc taaaaaagaa atatttgcat tagctccata
    42841 acctcctatg acaaaaacta tagctttgag atctttttca tcatcatagc taatgcggta
    42901 ttcaagctta ctagttcttt taatgcctag ttctacatca tcacaagaat caatttcaaa
    42961 ggtttggttt ataagcaatt ttaagccttt tattgtattt taaagacaat tatacttaaa
    43021 ttttagtaaa ataaaacaca aaaaacaagg cttaactatg aaaaatcttt gcatcatccc
    43081 tgctcgtggt ggatcaaaaa gaattcctag aaaaaatatc attgatttcc taggcaaacc
    43141 tttaatcgct tatagcatag aaaatgcttt aaattcaggt atttttgatg aagtggtgct
    43201 ttcaagcgat gatgaagaaa tcatagaagt agccttaaaa tacggtgcaa aagctccttt
    43261 tgtacgtgat aaaaatttaa gcgatgatta tgcttcaagc actgctgtag tgcaaaatgc
    43321 catagaaatt ttacaaagcc aaaatcaaat ttatgatcat gtctgctgcc tttatgctac
    43381 tgctcctttg ttaaataaag acattttaaa acaagcctat gaaaaattta tacaaaatca
    43441 aagcaagttt ttatttgctg ctactgagtt tgagtatcct atacaaaggg cattttatct
    43501 aaatgaaaac aatcaagttt atatgtttga tgaaaaacat tataaaagtc gttcacaaga
    43561 tctaacaaaa gcttatcatg atgcaggagc tttttatttt ggtacaagca aagcttggct
    43621 tgaggaagat tttatattta aacctcattc tagcgtgttt gtattgccaa gaaatttagt
    43681 ttgcgatata gacaccatac aagatttgga atttgcaaaa atactttata aggtaaatca
    43741 tgaaagtgct ttttagaagc gatagctcca gtcaaatagg ctttggacac attaaacgcg
    43801 atctagtctt agctaaacaa tatgatgatg taagttttgc ttgcttgcct ttagaaggct
    43861 ccttgatcga tgaaattcct tatcctgttt atgagcttag tagcgaaagt atctacgagc
    43921 ttatcaatct catcaaagaa gaaaaatttg aacttcttat cattgatcac tatggcatca
    43981 gcgtagatga tgaaaaactg attaagcttg aaacaggggt gaaaattcta agctttgatg
    44041 atgaaataaa gcctcatcat tgtgatattt tactcaatgt caatgcctat gcaaaagcaa
    44101 gtgattatga aggtttagtg ccttttaaat gcgaagtaag atgtggtttt tcttatgctt
    44161 taatcaggga agaattttat caagaggcca aagaaaatag agaaaaaaaa tatgattttt
    44221 tcatttgcat gggtggaact gatataaaaa acctttcttt acaaattgct agcgaattac
    44281 ctaaaacaaa aatcatcagc attgcaacca gctcttctaa tcctaatctt aaaaaattgc
    44341 aaaaatttgc aaaattacat aacaatatta gattatttat cgatcatgaa aatattgcaa
    44401 aattgatgaa tgaaagcaat aaactcatca tcagcgcaag ttctttagtc aatgaagcct
    44461 tgcttttaaa ggcaaatttc aaagctattt gttatgttaa aaatcaagaa tctacagcaa
    44521 cttggcttgc taaaaaaggg tatgaagtgg agtataagta ttgataaaac ttaaaaattt
    44581 cacagaactt aattctcaag aaatagagct gatttttaaa tggcgcaatc accccgatat
    44641 caatcaattt atgaaaacaa aatatattga ttttaaagaa catttaagat ttttaaaaaa
    44701 attacatcaa gattctagca aaaaatattt tttagttttt caagatgagc agattatcgg
    44761 cgtaattgat tttgtcaata tcacaactaa atcttgcgaa tttggacttt acgcaaaacc
    44821 taatttaaaa ggcgtaggac aaattttaat gaatgaaatt ataaaatacg cttttgaaaa
    44881 cttaaaagta aatactctta aagcttatgt tttcaaagac aatcgcaaag ctttaaaatt
    44941 atatcaacaa aatcatttta ctatttatga tgaagataaa gatttttacc atatttgcct
    45001 aaagcaatct gactgcaaag ccttgcctag ctaattcttc ttttacatct ttaggggtat
    45061 acttagaaaa atgaaaaata taagcacccg ctaaagcatc agcacctaaa tttaaagcct
    45121 caactccatc acttggattg ctaagtcctc cattgataat aagaggaatt ttaagtttat
    45181 tttgaaagat ctttaaaagt tctaaatcat aaccctttgc ccttccttca aaatccacag
    45241 aagttaaaag aagctctcca gctccttttt tttcatattc taaagcaagt tctaaaggac
    45301 ttttttcaag taaatttccc ctgtcataaa cacaaaattg ccctcctttt cttttaacat
    45361 ctatagaaca aactatacat tgagaaccaa aacgattagc cgctttactt ataaaatcca
    45421 tatcttctaa ggccttagaa ttgatagaaa ttttatccgc acctaaattt aaaatctttt
    45481 gtatatcttc aagggttttt atcccgccac ctatagttaa aggcataaaa cattctttag
    45541 caagatcttc tatactttca aaatctattt ctccactttt tgaagcatct atatctaaga
    45601 taataagctc atcaacattg cgtgcattat aaattctcat tgttgaagtt aaatgcccta
    45661 tagtgcgaaa atctttaaat tctatacttt taacaagttg tccgtttttt aacaaaacac
    45721 aagggataat tctagttttt aacatttaaa gccttgcaaa attttctaaa agttttaaac
    45781 ctaaattttg acttttttca gggtgaaatt gtgtagcaaa aatatgatct ttttgtaaag
    45841 atgcaacaaa tttatgtccg tattgtgctt tagcacttac aaactcatct ttgcatttca
    45901 cataaaaaga atgcacaaaa taaaaatcac tcttattatc tatgccttga tacaaaggaa
    45961 cttgttttaa aatttcaagc tcattccaac ccatgtgtgg gatttttaaa tttaaatcct
    46021 cttcaaattt gactacttca ccttctataa aaccaagtcc ttcgcaaact ccaccttcat
    46081 agcccctttc taaaaaaagc tgcattccca aacaaatgcc taaaataggt tttttttgta
    46141 ctaaaacttg ctcttttaaa gcttctataa aaccaaattc ttttaaattt ttcatggctt
    46201 ctttaaaaga tcccactcca ggtaaaagca atttatctgc tttttgcaaa tcttttggat
    46261 ttttagctat gaaatttata gctcctattt tttcaaaagc cttagcaaca gagtttaaat
    46321 ttcccgcctt gtaatcaatg agcgctatca ttttaaaaca cactcgtctt ttcttaccaa
    46381 agaaccatca taatctctta taaatttacc attttcatca cgtttaaaaa tttttttatt
    46441 ggtaaaagaa tctactattt tttgaaattc ttcctcgcta aaaccactga attcaaggta
    46501 ttttttaata gcctttttag ggggcttgcc atcgtatttt tgtaccaaac gcaccccttc
    46561 ttcacggctg atataaccta aacgaatatc caaacaagca ttatccgttg ctctaccaaa
    46621 gccgtatttg cagtatttta aataatcatg cacatgatta gaataacaat ctaaattttc
    46681 aaaattttca taagtagtct caacaggatg atctagagtt aaaaaaccat attttttaga
    46741 aatttcaaga atttttttat aatcccattt aaaataatac cctaaaaata gcccagtaac
    46801 ccctactctt tgaagttctt catcacttgg ataagtatat aaaaacaaat ctttttcagt
    46861 gataccattt accccaagca tatcagaagc acgatttcct aaaagcccgc caaattcttc
    46921 aagccactct ctgcctaaaa tatttttatt tttactactc gcaggaccgc catactctat
    46981 ctgcggactt tctccccaga tgatcaaagg cactccaaaa tttaccgcta tgcgtggaac
    47041 agaagtaaaa attcccaaat ggttttgcca ctcattatcc cctgttctta taaaagcttc
    47101 acgggcaagt ttttgataaa cttttggatc acgcttgata tggatcaaat ccacgccaag
    47161 atgatttaaa ttgtctaaat ttttgcgccc tattttcgta ggtacgctag gctcaaaaca
    47221 cacacacaaa ggattaagtc caagttcaag cattttaacc acttgaaaag tagaatcttt
    47281 tccgccactt actccgataa cacaatcata aacaggatgt tttttgtatt tttttataag
    47341 ctcaaaaaat tctttttctc tttcttgcca attaatattt tgatttttag cttcttgaga
    47401 acgacaagca tcacaaacac cttcttcatc aaaatgtaaa tcaggcttag tatctggcat
    47461 cacacatttt ttacaaaatt tcataaattt cctttaatta gtcttaaata ta
//
LOCUS       DAPWGO010000004        46659 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.004, whole genome shotgun sequence.
ACCESSION   DAPWGO010000004 DAPWGO010000000
VERSION     DAPWGO010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 46659)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 46659)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..46659
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.004"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            34..306
                     /locus_tag="RJ336_000162"
     CDS             34..306
                     /locus_tag="RJ336_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212643.1"
                     /translation="MSFTDFYFDREEKRISSQTKELIANEFESKENLENIFANLQDFK
                     NSLEISLEDDEEISISLQAYGDEFMRNAYEFLERVRKFEKQCKKLF"
     gene            885..1154
                     /locus_tag="RJ336_000163"
     CDS             885..1154
                     /locus_tag="RJ336_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212644.1"
                     /translation="MKAYHTKEQVIIKLSKDEYRKEIKLNKSLKDENKSLKDEISSLE
                     NEKIELLKELKDQIEANMENIKEISSLQNKIYELLYAKERSKLCS"
     gene            1145..1402
                     /locus_tag="RJ336_000164"
     CDS             1145..1402
                     /locus_tag="RJ336_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212645.1"
                     /translation="MFLNSKKNEKITYLEKEIQRLKGVIALKDTAINEISLKLEEEIK
                     INVKLSNFRIKILDALGLIGVFKNDDKAIKEVKRLKENECK"
     gene            1393..1620
                     /locus_tag="RJ336_000165"
     CDS             1393..1620
                     /locus_tag="RJ336_000165"
                     /inference="COORDINATES: protein motif:HMM:NF025456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212646.1"
                     /translation="MQITSKKQEKIVLGLLLKNGTVDNFYCIDKRITTRLGAYIYNLR
                     IKGYEIETVRNKETRNTFYILKSAPKIKKAG"
     gene            1622..2476
                     /locus_tag="RJ336_000166"
     CDS             1622..2476
                     /locus_tag="RJ336_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HDZ5212647.1"
                     /translation="MNCRIIDLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEEA
                     KDIILGLKEVYQNEAMKKGNNYEALIRARVEFLHSVSITPVVLQSLENEMFIASLDGM
                     DENGVIYEFKYSQDEYDFIKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVE
                     CEVSKDEAYQEWLVKNIKQFILDYIMDQKSEYKELEDTKAKNLTIEIIRLENTIKPIK
                     EKLESLKKELIALANGEKARCLDITIYLQSRTTIDYKGFLEQKNITVPKEFYKESISM
                     CLKIKKGA"
     gene            2478..3410
                     /locus_tag="RJ336_000167"
     CDS             2478..3410
                     /locus_tag="RJ336_000167"
                     /inference="COORDINATES: protein motif:HMM:NF015776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HDZ5212648.1"
                     /translation="MSNENMEVAIVEEKETQVKEFKENNHIVISEKFENELRLINEKF
                     SGENNKVMQILRDNKTASFLKVKNLSEAGLSILNNDYYIVPMGNNVNIEPSYMGLVKV
                     AINEALKRGFEIIVKSDTIANSDEVKIITENEIDNLSISKNPLDNSIKGAYALISIVK
                     NGNLLYRKAEFLTKEQLDIIKSKTFTKGGGVYKEFPEEMARKSAIRRAIKHIGYFIKS
                     DVLDGVINIDNENYNFSNSNLKAIDDKKEQINNSIKELKEIKDQYDAFIKENGISKKE
                     SEEFILKYNIFTIEKFQNVLANKEKAIKTIKGEL"
     gene            3410..4105
                     /locus_tag="RJ336_000168"
     CDS             3410..4105
                     /locus_tag="RJ336_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212649.1"
                     /translation="MLPAFKASFEVANYSPSVEYLSEGGLYSGVFRKAFLYDKLASDG
                     SNNTFICFEFLTRKEQKLAIFNLFVAKNNDFSYINKNGEKENYLGFRQLNAIMKFFGI
                     DELDFSEKGNENVFGVQTEVIYLNSLVNKLLVLGFGTEEYLSKNGEIANKIFLDRIFN
                     EKMQSMDEFQNNKEPLSIKSFKARHKSLNNDNNKSFIPKENQSYNPYGNEVKNNNNEK
                     YIEIGDDDESLPF"
     gene            4086..4364
                     /locus_tag="RJ336_000169"
     CDS             4086..4364
                     /locus_tag="RJ336_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212650.1"
                     /translation="MKVCRSNYLEIVKIIPFSERRTCFCDFAKQNEIKIEKINYKNHI
                     SKKELRKAYKIYKSKPSGRNFFHEKKLIVKAFEDVEKFLRSENEIKRF"
     gene            4456..4821
                     /locus_tag="RJ336_000170"
     CDS             4456..4821
                     /locus_tag="RJ336_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212651.1"
                     /translation="MDDENYVFTIEHGCERDYYGGDYDEYCKVKDFTTCNYEIELFTG
                     FYDKKGNKIYEGDILYSFEGCSEGEAFKYKAVLKEGAFYLVECGDDGEEYDEDLISEF
                     RLEELEIVGNIHENAELLK"
     gene            4818..5168
                     /locus_tag="RJ336_000171"
     CDS             4818..5168
                     /locus_tag="RJ336_000171"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212652.1"
                     /translation="MKLVDKLKKAYDYKKELYKAEKGSSSKEYHIENAEIFQDFIELE
                     LLQCEDIERRCFLMQIYRYGYQNIRSLNSKLAFKAKLDNDDINFIKILKEANILHALN
                     EIYTTKEVKKIAKD"
     gene            5174..5842
                     /locus_tag="RJ336_000172"
     CDS             5174..5842
                     /locus_tag="RJ336_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212653.1"
                     /translation="MTEIQFNEIKERLKQWRQERHLTYENQRKDFLGNVFEKASEYFR
                     AKDDLERVEALCDIAVFCFNAFDIIDFDYYCEFCSNNENIEIYNLTDEISEVCCKVIK
                     KLHVKTSIPRIISYCQYLCKNLGFDFYKCMLEKIKEIESRTGFYDERLKKFVDTICAF
                     SKDEALSNVSKDFGFLGNSIIYKLTQEDKNFWFITCKEIETNLQIDYKVKKIYKADYK
                     SCRL"
     gene            5962..6504
                     /locus_tag="RJ336_000173"
     CDS             5962..6504
                     /locus_tag="RJ336_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002801905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HDZ5212654.1"
                     /translation="MGILKRLDETIIIENDRKSEKELVECCILEGISLNNANLENINL
                     SELDFNNAFINGASFKNANLNDISSKNASFIDCDFSGASFHFCNFLRTEFENCIFENV
                     DLRDCIGDMKNIFSVVLDTYVMTFTKTMMNLGCDTKTIKEWRNLSVDDLEDEEQKWLW
                     NYYKDTIFEIIDKRLGVENG"
     gene            6497..6667
                     /locus_tag="RJ336_000174"
     CDS             6497..6667
                     /locus_tag="RJ336_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDZ5212655.1"
                     /translation="MVKKYFREKELSEYLGVSITSLFKLRQDGKIPYIRIGKSIRYEI
                     KEIEKWLKAKRH"
     gene            complement(6664..7866)
                     /locus_tag="RJ336_000175"
     CDS             complement(6664..7866)
                     /locus_tag="RJ336_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDZ5212656.1"
                     /translation="MLTQKDIDNLEIKDKRYMISVGEPKELYVRVNPTGKKVFYLRAS
                     KFKNFITIGECQKGVLNVTNAREKAKDLLKSMYDGKFIGKNDKVMTLEKANFLYVDIK
                     SKKLNSATIKKEQSIFKKYIIPTLGQKDINELKKDDFLPIYDLMQKKGIYETIKKNIS
                     LLCRIFEISRQRGDLKTDIILQLKDLKKFYNEANHNKVKHFKAIVEEQEIRNMLECMK
                     EYKNHPRTNTTIINAIYFTLLTAQRSKNIRFAKWSDIDFENNLWIIKADEMKVRSNGD
                     NIIPLNKYALKILDMQRILNGDKKYIFANNNGTISENFAVRFFKFYNLEHTIHGYRST
                     FRSVYTNKSNELIQQGISKDIAEMILHHISGNEIERAYNRAKAIDLRVKLMQWYGNYL
                     NSLCEFCF"
     gene            complement(8049..8125)
                     /locus_tag="RJ336_000176"
     tRNA            complement(8049..8125)
                     /locus_tag="RJ336_000176"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8089..8091),aa:Arg,seq:cct)
     gene            complement(8154..10229)
                     /gene="fusA"
                     /locus_tag="RJ336_000177"
     CDS             complement(8154..10229)
                     /gene="fusA"
                     /locus_tag="RJ336_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDZ5212657.1"
                     /translation="MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVH
                     DGAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGA
                     VAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPV
                     PLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEA
                     VSETSDELMEKYLGGEELSLEEIKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVV
                     AYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCL
                     ESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEK
                     DKVILERMDFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIIS
                     GMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHV
                     FLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDVKVTVY
                     DGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNK
                     RRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVA
                     DEIIKKRNG"
     gene            complement(10242..10712)
                     /gene="rpsG"
                     /locus_tag="RJ336_000178"
     CDS             complement(10242..10712)
                     /gene="rpsG"
                     /locus_tag="RJ336_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDZ5212658.1"
                     /translation="MRRRKAPVREVLPDPIYGNKVITKFINSLMYDGKKSTATTIMYG
                     ALEAIDKKGGEKKGIDIFNDAIENIKPLLEVKSRRVGGATYQVPVEVRPARQQALAIR
                     WIISFARKRSERTMIDKLAAELLDAANSKGASFKKKEDTYKMAEANKAFAHYRW"
     gene            complement(10782..11168)
                     /locus_tag="RJ336_000179"
     CDS             complement(10782..11168)
                     /locus_tag="RJ336_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDZ5212659.1"
                     /translation="MPTINQLVRKERKKVLEKSKSPALKNCPQRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGAL
                     DTAGVAKRTVSRSKYGAKRPKAGTAK"
     gene            complement(11288..15841)
                     /gene="rpoC"
                     /locus_tag="RJ336_000180"
     CDS             complement(11288..15841)
                     /gene="rpoC"
                     /locus_tag="RJ336_000180"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDZ5212660.1"
                     /translation="MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPET
                     INYRTLKPERDGLFCAKIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSR
                     MGHIELVTPVAHIWYVNSLPSRIGTLLGVKMKDLERVLYYEAYIVENPGDAFYDNEST
                     KKVEYCDVLNEEQYQNLMQRYENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMAAT
                     NSEAKKKTIIKRLKVVENFLNSNLNANADSDEAVPNRPEWMMITNLPVLPPDLRPLVA
                     LDGGKFAVSDVNDLYRRVINRNTRLKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRR
                     ANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPK
                     KMALELFKPHLLAKLEEKGYATTVKQAKKMIENKTNEVWECLEEVVKGHPVMLNRAPT
                     LHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSQEAIAECKVLMLS
                     SMNILLPASGKSVTVPSQDMVLGIYYLSLEKAGAKGSHKICTGIDEVMMALESKCLDI
                     HASIQTMVDGRKITTTAGRLIIKSILPDFVPENSWNKVLKKKDIAALVDYVYKQGGLE
                     ITASFLDRLKNLGFEYATKAGISISIADIIVPNDKQKAIDEAKKQVREIQNSYNLGLI
                     TSGERYNKIIDIWKSTNNVLSKEMMKLVEKDKEGFNSIYMMADSGARGSAAQISQLAA
                     MRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKL
                     IDVAQNVKITIEDCGTHEGVEINEITADSSIIETLEERILGRVLAEDVIDPITNSVLF
                     AEGTLMDEEKAKILGESGIKSVNIRTPITCKAKKGICAKCYGINLGEGKLVKPGEAVG
                     IISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYNLKTYKNKEGKNI
                     VANRRNAAILLVEPKIKTPFKGVINIENIHEDVIVSIKNKKQEVKYILRKYDLAKPNE
                     LAGVSGSIDGKLYLPYQSGMQVEENESIVEVIKEGWNVPNRIPFASEILVEDGEPVVQ
                     NIKAGEKGTLKFYILKDDGLDRVKNVKKGDIVKEKGFFVVIADENDREAKRHYIPRES
                     KIEFNDSEKIDDANTIIASAPKKERKVIAEWDAYNNTIIAEIDGVVSFEDIEAGYSAD
                     EQIDEATGKRSLVINEYLPSGVRPTLVIAGKGDKAVRYQLEPKTVIFVHDGDKIAQAD
                     ILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIII
                     QAEDGTSAEYLIDKSKHIQVRDGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISE
                     IQQVYRGQGVVISDKHIEVIVSQMLRQVKVVDSGHTKFIEGDLVSRRKFREENERIIR
                     MGGEPAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVI
                     LGRMIPVGTGLYGEQNLKLKEQE"
     gene            complement(15834..19970)
                     /gene="rpoB"
                     /locus_tag="RJ336_000181"
     CDS             complement(15834..19970)
                     /gene="rpoB"
                     /locus_tag="RJ336_000181"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDZ5212661.1"
                     /translation="MCDMLDNKLGNRLRVDFSNISKQIEIPNLLQLQKKSFDYFLNLD
                     NGESGIEKVFKSIFPIHDPQNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIR
                     LTLHEKDEKTGEKVGVKDIKEQEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVI
                     FKEEESSTVANKLVYTAQIIPDRGSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGY
                     KKQDIIKLFYPIQTIHVKKDKFLTEFNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKK
                     AEQLIKDGLKWIEYPVEILLNRYLANPIIDKESGEVLFDSLTLLDESKLAKIKEQKSF
                     DIANDLANGVDAAIINSFAQDGETLKLLKQSENIDDENDLAAIRIYKVMRPGEPVVKD
                     AAKAFVNDLFFNPERYDLTKVGRMKMNHKLGLEVPEYVTVLTNEDIIKTAKYLIKVKN
                     GKGHIDDRDHLGNRRIRSIGELLANELHLGLAKMQKAIRDKFTSLNADLDKVMPYDLI
                     NPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDVH
                     ATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVEAPYRKVVNGKVTNEVVYLTAT
                     QEEGLFIAPASTKVDAKGNIVEEFVEARQDGETILARREEVQLIDLCSGMVVGVAASL
                     IPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQIIARDAWEAVKAKRGGVVE
                     KVDNKSIFILGEDDKGPFIDHYTMEKNLRTNQNTNYIQHPIVKKGDIVKAGQIIADGP
                     SMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVHIYEKEIEARELKD
                     GIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSPKGEVKPTPEERLLR
                     AIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRAIKSYDKEKMALEKEHH
                     DRLLMMDREEMLRVCALLSKAPLNSDQKIGDKNYKKGQTADISELEKINRFTLTTLIK
                     AYSKEIQKEYDDLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYIATKRK
                     LKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILESHL
                     GLIGLRLGDQIQEIFDRKQKDFLKELRAKMLEICSIPRLASEKEFIKSLSDEELLNYA
                     RDWSKGVKFATPVFEGVNIEEFSKLFEMAKIDMDGKTELYDGRTGEKIAERVHVGCMY
                     MLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLRE
                     MLTIKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
                     "
     gene            complement(20079..20456)
                     /gene="rplL"
                     /locus_tag="RJ336_000182"
     CDS             complement(20079..20456)
                     /gene="rplL"
                     /locus_tag="RJ336_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDZ5212662.1"
                     /translation="MAISKEDVLEYISNLSVLELSELVKEFEEKFGVSAAPVMVAGGA
                     AAGGAAAAAEEKTEFDIVLTDGGAKKIEVIKIVRALTGLGLKEAKDAVEQTPSTLKEG
                     VAKAEAEEAKKQLEEAGAKVELK"
     gene            complement(20477..20956)
                     /locus_tag="RJ336_000183"
     CDS             complement(20477..20956)
                     /locus_tag="RJ336_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDZ5212663.1"
                     /translation="MTRSEKVEIIAKLEEGFKASEAIVVCNYRGLSTKKLEELRNNAR
                     ENNVKVQIVKNTLANIALNNSGKTGLVLKDTNIYLWGEDQLSVSKVAAKFEENNDKFE
                     IKTAYIEGEVADVAKVKALAKMPSRNELLAMLLQVWNAPITNFTIGLNALKNKKESE"
     gene            complement(21108..21809)
                     /locus_tag="RJ336_000184"
     CDS             complement(21108..21809)
                     /locus_tag="RJ336_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDZ5212664.1"
                     /translation="MAKIAKRLKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEI
                     ALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVE
                     EIQKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQ
                     VNFRVDKQGNIHAGLGKVSFSKEQLWDNVSTFVKAINKHKPAAAKGRYIKNAALSLTM
                     SPSVKLETQELLDMK"
     gene            complement(21864..22289)
                     /gene="rplK"
                     /locus_tag="RJ336_000185"
     CDS             complement(21864..22289)
                     /gene="rplK"
                     /locus_tag="RJ336_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDZ5212665.1"
                     /translation="MAKKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNE
                     RTKDMAGFNIPVVITVYADKSFTFITKQPPATDLIKKAAGISKGTDNPLKNKVGKLTR
                     AQVLEIVDKKIADLNTKDRDQAAKIIAGSARSMGVEIVD"
     gene            complement(22315..22848)
                     /gene="nusG"
                     /locus_tag="RJ336_000186"
     CDS             complement(22315..22848)
                     /gene="nusG"
                     /locus_tag="RJ336_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDZ5212666.1"
                     /translation="MSTHKWYAIQTYAGSEMAVKRAIENLVKDNGIEEQLKEIVVPTE
                     DVIEFKNGKEKISERSLYSGYVFALLDLNTELWHRIQSLPKVGRFIGESKKPTPLTEK
                     DINLILEKVHNRAAPKPKISFEEGENVRITEGPFANFTAIVEEYDMVRGLLKLNVSIF
                     GRSTPVEILYSQVEKII"
     gene            complement(22858..23037)
                     /gene="secE"
                     /locus_tag="RJ336_000187"
     CDS             complement(22858..23037)
                     /gene="secE"
                     /locus_tag="RJ336_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDZ5212667.1"
                     /translation="MEKLITYFKLSKAELRKVIFPLKEQVRNAYITVFVVVAVISLFL
                     ALVDWLMSSIVSAIV"
     gene            complement(23056..23131)
                     /locus_tag="RJ336_000188"
     tRNA            complement(23056..23131)
                     /locus_tag="RJ336_000188"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(23096..23098),aa:Trp,seq:cca)
     gene            complement(23144..23302)
                     /gene="rpmG"
                     /locus_tag="RJ336_000189"
     CDS             complement(23144..23302)
                     /gene="rpmG"
                     /locus_tag="RJ336_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDZ5212668.1"
                     /translation="MRIKVGLKCEECGDINYSTYKNSKNTTEKLELKKYCPRLKKHTL
                     HKEVKLKS"
     gene            complement(23355..24554)
                     /gene="tuf"
                     /locus_tag="RJ336_000190"
     CDS             complement(23355..24554)
                     /gene="tuf"
                     /locus_tag="RJ336_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDZ5212669.1"
                     /translation="MAKEKFSRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRRGLAEL
                     KDYDNIDNAPEEKERGITIATSHIEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDAELLELVEMEIRELLSS
                     YDFPGDDTPIISGSALKALEEAKAGQDGEWSAKIMDLMAAVDSYIPTPTRDTEKDFLM
                     PIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEA
                     GDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRP
                     QFYVRTTDVTGSIKLADGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSG
                     VVSKIIK"
     gene            complement(24623..24697)
                     /locus_tag="RJ336_000191"
     tRNA            complement(24623..24697)
                     /locus_tag="RJ336_000191"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24663..24665),aa:Thr,seq:ggt)
     gene            complement(24802..24878)
                     /locus_tag="RJ336_000192"
     tRNA            complement(24802..24878)
                     /locus_tag="RJ336_000192"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24842..24844),aa:Gly,seq:tcc)
     gene            complement(24885..24970)
                     /locus_tag="RJ336_000193"
     tRNA            complement(24885..24970)
                     /locus_tag="RJ336_000193"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24934..24936),aa:Tyr,seq:gta)
     gene            complement(25020..25095)
                     /locus_tag="RJ336_000194"
     tRNA            complement(25020..25095)
                     /locus_tag="RJ336_000194"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25060..25062),aa:Thr,seq:tgt)
     gene            complement(25210..25947)
                     /locus_tag="RJ336_000195"
     CDS             complement(25210..25947)
                     /locus_tag="RJ336_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDZ5212670.1"
                     /translation="MSILKIENLQKYYGSHHALKDINLEVKAKEVVVILGPSGCGKST
                     LLRCINGLEEIASGNIYIDNEKIDKDFKEWPRMRQKVGMVFQSYELFEHLSVEENILL
                     GPMKVQKRKKDEVLKEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELM
                     LFDEVTAALDPEIVREVLEVMLNLAKEGMTMLIVTHEMGFAKAVADKIIFMDEGKIIE
                     ENDPKSFFENPKSERAKKFLNLFDYHK"
     gene            complement(25949..26605)
                     /locus_tag="RJ336_000196"
     CDS             complement(25949..26605)
                     /locus_tag="RJ336_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDZ5212671.1"
                     /translation="MLELLNTDTLLRLWQGLFVTLEISFISIIITSIGGLFLGILMSF
                     KNTYIYAFCRLGLEFVRVMPLLVWLFVVYFGFPRWFGWDLSSVSAAIIVFSIWGCFEM
                     MDLVRVSLQSIPKHQYESASSLGLNTVQSFVYIIIPQAMRRLTPMSMNLLTRMIKSTT
                     FAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS
                     "
     gene            complement(26598..27299)
                     /locus_tag="RJ336_000197"
     CDS             complement(26598..27299)
                     /locus_tag="RJ336_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDZ5212672.1"
                     /translation="MDFDFILVQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYF
                     KIKILENICKLYIEFSRNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSVEETLRP
                     SFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAI
                     SMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILP
                     LSFILLKFEKRLLHA"
     gene            complement(27316..27912)
                     /gene="nssR"
                     /locus_tag="RJ336_000198"
     CDS             complement(27316..27912)
                     /gene="nssR"
                     /locus_tag="RJ336_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrosative stress-sensitive transcriptional
                     regulator NssR"
                     /protein_id="HDZ5212673.1"
                     /translation="MKDYLELLSSVGKLKKIQKNSILFYEGEEAKKFFILLKGKIRIY
                     KSTASDKEITLHYFNPPNFIAEMPAFKKLNYPANAIFEEDGEILEIDFINFQNLCSEN
                     KEFNFLLISSLFDKIKILEKKLSQNALDLRTRLLKYLLENEKNLDTISQKQIAIDLNV
                     RAQSLSRVLKELKISELIDTKKGRIEILNKDMIMKELW"
     gene            28007..28390
                     /gene="ctb"
                     /locus_tag="RJ336_000199"
     CDS             28007..28390
                     /gene="ctb"
                     /locus_tag="RJ336_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="truncated hemoglobin Ctb"
                     /protein_id="HDZ5212674.1"
                     /translation="MKFETINQESIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWK
                     EHKAKIGNFWAGMLLGEGDYNGQPLKKHLDLPPFPQEFFEVWLGLFEESLNMVYNEEM
                     KAVILQRAQMIASHFQNMLYKYGGH"
     gene            complement(28387..30210)
                     /gene="recG"
                     /locus_tag="RJ336_000200"
     CDS             complement(28387..30210)
                     /gene="recG"
                     /locus_tag="RJ336_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDZ5212675.1"
                     /translation="MKIKESDFEFFKKLKIRSAIDLALLLPKKIENLNPSKNPKENEI
                     CTQKITIKSVSSRKNQLFGLGFCEEWQENISFVFFHPRAWHFGVCKVGKELIFNAKLS
                     RFNHTWQFNNPKILTSFEGFSPKYQILGLKDTKIAAFIHKYLNYENLKESGIEDKYIH
                     FLLNLHAYDEKSFFMFENLQNFSKDLKYIEIYNFLKRLKAKQTHFKAHQINVFNIANW
                     LKDLPFSLTKDQLNALKDIEKDLHSKEAKRRVIMGDVGCGKTLVLLGAALMVYPKQAI
                     LMAPTSILAYQLYEEAKKFLPDFMNILFIKGGKKEKDLEQNIQKANLIIGTHALIHLE
                     SHNAVLVMIDEQHRFGSAQREKIHSLNKQEFAPHFIQFSATPIPRTLSMIQSELLNFS
                     FIKQMPFKKDITTYCIQNEGFSKLSEKIKEEISKNHQIIIIYPLVSASDNIPYLSLEQ
                     AKEYWQSHYEKVFVTHGKDKQKDEILERFRDEGNILLSTTVVEVGISLPRLSMIVIVG
                     AERLGLATLHQLRGRVGRVGLKSTCYLYTKLKEIPSRLKEFASTLDGFKIAELDLKNR
                     LSGDLLDGFMQHGNEFKFFDFSKDEEILEKVKKDLAKKLPN"
     gene            complement(30200..31420)
                     /locus_tag="RJ336_000201"
     CDS             complement(30200..31420)
                     /locus_tag="RJ336_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDZ5212676.1"
                     /translation="MQYLESRGVKIPFIFEKNSDFPIVVLKLVFRNCARSYDEIAGLA
                     KMFSRILNEGVDDKFFKDLEFRAINLEASSGFESLEINLSCLKENFDFALKSLEKLLL
                     KPRIEEKTLQKLKINALGELASKNSNFDYLAKNLLNAQIFKCKEFQSPNDGDEKSIET
                     LSLKDLQNFYKNFIHLSDLVVILGGDLEEKQAKEDLLKLLSKLQIGKKNTPKKYELSK
                     NIKDEILVRPESEQAYIYFATPFFADFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVK
                     RGLAYSAYAMLDMNMSFSRVFGYLQTKNESAKEAKKIVKELFEDFIKNGMTQNELDQA
                     KNFLIGSTPLRYESLSKRLSIAFNEFYQGLNLGYYKEELKLMEKVKLETINAYIKKHQ
                     ELLNISFASIQNEN"
     gene            complement(31420..32466)
                     /locus_tag="RJ336_000202"
     CDS             complement(31420..32466)
                     /locus_tag="RJ336_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HDZ5212677.1"
                     /translation="MKRLDKKEALDLLHHASLTELGEMAYRRKLELHPEKITTFVVDR
                     NINYTNVCCIDCSFCAFYRHHKEDDAYILSFEEIDKKIEELEAIGGTQILFQGGVHPK
                     LKIEWYEELVSWIKEHYPNITVHGFSAVEIAYIAKASKISITEVLQRLQAKGLFSIPG
                     AGAEVLSDRVRDIIAPNKCDTATWLEVHRQAHKIGMKSTATMMFGTVENDEEIIDHFE
                     HLRKLQDETGGFRAFILWSFQSDNTALIQKHPEIMKQSSNKYLRLLALARLYLDNFKN
                     LQSSWVTQGSLIGQLALKFGANDLGSTMMEENVVSAAGASYRMNQDEMIRLIRSLGEN
                     PAKRNTAYEILERF"
     gene            32541..33728
                     /locus_tag="RJ336_000203"
     CDS             32541..33728
                     /locus_tag="RJ336_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ5212678.1"
                     /translation="MNYIELLKNNKNIRILASVQFIVYFGAWFSQTGVFTLLVELNAP
                     TWATATSAMLAFLPGVLLAPINGVIVEKNKPKKLLLNMISIELISIFCLIFVTSLSML
                     WLLFILIFIRLCVASIYFQAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGI
                     FIYFLGVKTAFLFDCMLILIGISFLVRLSIPDFHQKTQSRFFIMIKEGFFYVLNNKII
                     FHLILLHAFIGLTAYETLVTLLAQHQYKEVLSAALVIGFLNAVRACSLAIGPMVLSKF
                     INDKNLFYMYLGQGFGIILWALTQFNFYISFLGLIGAGFFTSALWAYTYTMIQKNADK
                     EYHGRVIAYTDMIYLSFSAIISMLMGFLFEIDLSLELITGLLGMIFIFAAFYWKWFYK
                     KYL"
     gene            complement(33744..34832)
                     /gene="nusA"
                     /locus_tag="RJ336_000204"
     CDS             complement(33744..34832)
                     /gene="nusA"
                     /locus_tag="RJ336_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDZ5212679.1"
                     /translation="MEKIADIIESIANEKNLNLENVREKVATALINTAKRIYGQEYEF
                     FVDPKNLNLYQKITIVADNDERLQNKSESFIALSKAKSEAPDVEIGDELTYECSLENL
                     GRTAVNTLHKELEYHIQKLLEQTIFEKYKNKVGQMVFGTVVRVDNEENTFIEIDELRA
                     FLPRKNRIKGEKFKIGDVAKAVIRRVYTDKGIKIELSRTSPKFLECLLEAEVPEIKDG
                     YVNIIGCARIPGERAKIILQANGANIDPVGATVGVKGVRINAVSKELHNENIDCIEFT
                     NESEILISRALAPAIVNSVKIEDKKAIVSLNSEQKSKAIGKNGINIRLASMLSGYEIE
                     LNELSSSQLNNAISNEEAMKNLQDLFKI"
     gene            34959..35201
                     /locus_tag="RJ336_000205"
     CDS             34959..35201
                     /locus_tag="RJ336_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212680.1"
                     /translation="MELKLARTLINEKPKNISLEKIEEAIEKEGQKFFYFDKDNTHKQ
                     LIALVNHFEKKGVSIYHRTVKYGLDDNDFMYEVHIL"
     gene            35198..36499
                     /gene="miaB"
                     /locus_tag="RJ336_000206"
     CDS             35198..36499
                     /gene="miaB"
                     /locus_tag="RJ336_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDZ5212681.1"
                     /translation="MSAKKLFIQTLGCAMNVRDSEHMIAELTQKENYALTEDIKEADL
                     ILINTCSVREKPVHKLFSEVGGFEKVKKEGAKIGVCGCTASHLGNEIFKRAPYVDFVL
                     GARNISKITQAIKTPKFMGVDIDYDESEFAFADFRNSIYKSYINISIGCDKHCTYCIV
                     PHTRGDEISIPFNIIYKEAQKAVEKGAKEIFLLGQNVNNYGKRFRNEHKKMDFSDLLE
                     ELSTIEGLERIRFTSPHPLHMDDKFLEVFANNPKVCKSMHMPLQSGSSEILKAMKRGY
                     TKEWYLNRALKLRELCPNVSISTDIIVAFPGESEKDFEETMDVLEKVRFEQIFSFKYS
                     KRPLTKAATMPNQIDEETASRRLSTLQNRHSEILDEIVKKQENKTFKVLFEELRAGNS
                     IAGRTDNNFLVQVEGSEELLGQFKEVKITNAKRMVLYGEIV"
     gene            36483..37112
                     /locus_tag="RJ336_000207"
     CDS             36483..37112
                     /locus_tag="RJ336_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HDZ5212682.1"
                     /translation="MGKSFKIHCLTYIIFILQWLIFLSCKKHYKGEKVDRKASVILFW
                     HGKLALMPFAFRHYRQKNKKAYVMISHHKDGEQIAKIIKLFGLDTVRGSTSRGASSAL
                     RAAFKVLEQNDDIVITPDGPRGPYHSISDGSIILAQKKELKIRILNYEANRFWEFKSW
                     DKMILPKPFSKITYSLSEPLDILSLDKEKAKEFLMEQFDKINLADQFKE"
     gene            37114..38073
                     /locus_tag="RJ336_000208"
     CDS             37114..38073
                     /locus_tag="RJ336_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clan AA aspartic protease"
                     /protein_id="HDZ5212683.1"
                     /translation="MLFLLKKIFPQLFISIILEDKKNIVKASIYRGNKLISSNEKTFD
                     KSENLLEYIKNLSKHFLFYHTALFLDAKEQGLIPSTNIQDCEHFNIGKISLQHILFNN
                     ALVYTATEHVEYYSELFEEYRGLDFLYSPFALLYYNIQKEKQPDDQILLYGFKQGHLL
                     AIIVAKGNTILYGDFKIFEQELGLELELPSEDNQEIENNNDDTEVTLDNFNEALNNKF
                     DLLDQENNLETLDNNDNFNLDELNQFSNDMELCRYIITSIEKFYNDDKYAGVFINGIL
                     LYSESDINISAIDFLESETFLEIKTKQINTLDLMIELMQKELK"
     gene            38070..38597
                     /locus_tag="RJ336_000209"
     CDS             38070..38597
                     /locus_tag="RJ336_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212684.1"
                     /translation="MTYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIA
                     LINSSIDDEKQQVIVLQNQTKQNEMLYEILFDQSQIAKNFNTQNQIVKESLRNLFDII
                     VKTDNITLESVEQDEYSLKLIGVTPTREMFTLLLETPLKSIFDQSYTTYYRLDNGWYR
                     FVSISKQIPGVADER"
     gene            38587..39105
                     /locus_tag="RJ336_000210"
     CDS             38587..39105
                     /locus_tag="RJ336_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212685.1"
                     /translation="MKDKSLEEIDLLKLIICALSFISVCTALILFLLLPTLKNYKQAN
                     LRENSQLAILKAAKSKFDFSEDKISTLRSENNKSLEQFEQNFNIGNFDIFLQKYFQNV
                     KIQETKPKKQEKYLKNRLAIKATMNNPRRLYDFIDALKNYNNLIKLDYPLNLKAGEQG
                     ISIDLTLKVYSS"
     gene            complement(39097..40389)
                     /gene="thiC"
                     /locus_tag="RJ336_000211"
     CDS             complement(39097..40389)
                     /gene="thiC"
                     /locus_tag="RJ336_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HDZ5212686.1"
                     /translation="MKTQMNYAKEGVFTKEMQIVAQKENLSKDFLLENIACGKIIIPA
                     NINHKSLDPNGIGFGLRTKVNVNLGVSNDCVDYSEEMKKVELAHKFDIEAIMDLSNYG
                     KTSRFRDELVNVSKAMIGTVPVYDAVGFLEKDLKQIGAKDFLDVVYHHAKSGVDFMTI
                     HAGINSRAAHIFKQSKRLTNIVSRGGSVLYAWMMMKDAENPFFEYYDDLLDICLKYDV
                     TLSLGDALRPGSTHDASDGAQISELIELSLLTQRAWDVGVQVMIEGPGHMAINEIEVN
                     MQLEKRLCKGAPFYVLGPLVTDIGAAYDHISGAIGGAVAAASGADMLCYVTPAEHLRL
                     PNLEDVREGIVATKIAAHAGDIAKLPKERARDDEMSKARQEIDWEKMFKLAIDGEKAK
                     KMFNERRPDDLNSCSMCGKMCAMNTMNQILKGEDVSLA"
     regulatory      complement(40446..40550)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(40572..41333)
                     /locus_tag="RJ336_000212"
     CDS             complement(40572..41333)
                     /locus_tag="RJ336_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDZ5212687.1"
                     /translation="MSSQQIDQIISILNKQSKPYDWVMQEFAKVEELKNFDLDLETFE
                     LLGLGLTLNKDNIFTLKTRTTKIKDEIFCIVDIESTGGVSKGEILEIGAVKIQNSKEI
                     GRFQSFVKVKEIPENITELTGITYEMVENAPSLAKVLSDFRLFLKDSIFVAHNVRFDY
                     SFISKALNECGFGILLNRRICTIEFAQCCIESPKYKLEVLKEFLGVENTHHRALDDAL
                     AAAEIFKYCLGKLPYHIKTTEELINFTKTARIKQK"
     gene            complement(41330..41977)
                     /gene="rpe"
                     /locus_tag="RJ336_000213"
     CDS             complement(41330..41977)
                     /gene="rpe"
                     /locus_tag="RJ336_000213"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDZ5212688.1"
                     /translation="MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLT
                     FGPCVIEKISTISKLPLDVHLMVKDVSKFIDLFIPLKPKFISFHMESEVHPIRLCEYI
                     RSQGIHPAIVLNPHTPIDSIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQM
                     IDKKNAKVFIEVDGGVNGLNASDLEESGADILVAGSYIFSSNDYKTAISSLKLEF"
     gene            42117..42311
                     /locus_tag="RJ336_000214"
     CDS             42117..42311
                     /locus_tag="RJ336_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDZ5212689.1"
                     /translation="MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLEDGT
                     TRKMRIAASTLRTLKKQNSK"
     gene            42496..42711
                     /locus_tag="RJ336_000215"
     CDS             42496..42711
                     /locus_tag="RJ336_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDZ5212690.1"
                     /translation="MLHEYRELMSELKGKDAHFDKLFDRHNELDDMIKDAEEGRTSLS
                     SMEISTLKKEKLHVKDELSQYLANYKK"
     gene            42721..43818
                     /locus_tag="RJ336_000216"
     CDS             42721..43818
                     /locus_tag="RJ336_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CZB domain-containing protein"
                     /protein_id="HDZ5212691.1"
                     /translation="MFGSKINHSDLQKLEEENKNLAHKIEKFQSENLELKNKITSLEQ
                     AALESKLKTDLLNVLLTGVLKNITIVQGDMLENVNKAEVISSYSKTSLAEMDELNHIA
                     NSINASLGDITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRKLAEKTQKATTEVEMNINLLKQNANEMYTQSEQVEKISIDSN
                     AHIMSFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFSKSGKQ
                     LADHTSCRLGKWLASTGKERFGQNKSFLKINEPHEKVHENMNNAITIANTEDISKDIT
                     QHSIINKCEVAENASLDLFNVFKEMLDESDH"
     gene            complement(43860..44447)
                     /locus_tag="RJ336_000217"
     CDS             complement(43860..44447)
                     /locus_tag="RJ336_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDZ5212692.1"
                     /translation="MAFKNLKELSFEKSNYIKPKRFAYESNGKFCTWDFIESKDSVSV
                     LLYHKELESFIFVRQFRIPLWYHQMHDKDYVKDDNMGYTIELCSGLVDKKLSLEEIAK
                     EECIEELGYAPKNLEKIGDFYTGFGSGVSKQSFYFAEVDEKDKISSGGGVDDEEIEAV
                     YVKVQDFEKKCKNIIRTPLLDFAYMWFLKEKWEKY"
     gene            complement(44530..46584)
                     /locus_tag="RJ336_000218"
     CDS             complement(44530..46584)
                     /locus_tag="RJ336_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006655032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDZ5212693.1"
                     /translation="MKFKKSLLCFLILSGALLKAEEKYQLNDVVVSASGFEQDLVDAP
                     ASISIITKEELEKKPIKDIGEAIGDIPGVDVTMNKTGTYDFSIRGFGSSYTLVLIDGK
                     RQSVANGFYDNGFSGSESGYLPPLSMIERIEVIRGPASTLYGSDAVGGVINIITKKNP
                     DKTEANIEFNTLLQQHSNHYGNAGGFNAYVATPLIEDTLSISARLKYYDKAASDLKWP
                     TPVWNNSQQRPDNYQIASHSPGAFTSLGFGSRLNWTVDDKNNIYFDIERYINEISVNS
                     TSSRAIKSERQLFKDNIVLNHDGNYDFGSTNSYLQYGSTKDKELHSQIWVGEGKVVLP
                     WNLGQYGNLVNTFGARIDYEMLKNDQASAGSQIRGKNLDQTTVALYGENEYFITDDLI
                     FTTGLRYIYSDLFDSEFTPRVYLVYHLNDNIAFKGGVSKGYKTPAAKELTNGYYNYSN
                     DNAYFGNPDLKPEESINYELGVDFRIFDFAHYSITGFITDFTNQISSEDLTGMQNGIN
                     CSNGTVCTRPINLGKTQTKGIEFAFNTKTYNGFSLNSSYTFMDNRYKDGQKNWFGGDR
                     IENLPRHIAMLKLNYERGKFSSYIKTRARLDTIAKAKGGGNGSLPWQKYKPFYIVDLG
                     INYKINKQSSLSFVVQNLFDKNFFDPQVTKWAGANPAGYANRYQDYTEGRSFWLSYKY
                     DF"
BASE COUNT        15966 a         8092 c         6476 g        16125 t
ORIGIN      
        1 atacttttat caacaaaaca aaaaggagaa aagatgagtt ttacagattt ttattttgat
       61 agagaagaaa aaagaatttc tagccaaaca aaagaattaa ttgcaaatga gtttgaaagc
      121 aaagagaatt tagaaaatat atttgcgaac ttgcaagatt ttaaaaactc tttggaaata
      181 agcttagaag atgatgaaga aatatctatc tctttacaag cttatggaga tgaatttatg
      241 agaaatgcct atgaattttt agagagagtt agaaaattcg aaaaacaatg caaaaagctt
      301 ttttgaaagt ttaacaagtt ctttaaaaaa gagctttctt aagcttttga ccgcttgaaa
      361 attaagcttt actattgcgt tgatagttct gtatagcgga agggttagca agttatccat
      421 aaacttggct cgctattatt gtttatagtg ctatttttaa ggttttcttg cactttaaaa
      481 acgacagaaa atcaagagtt taagaaaaag aaagtataat tataaagttt aagttgctaa
      541 cttgtctcgg tgttgagaaa ggaggctcta aaatgtggga taaaatttta acaattttaa
      601 tcttaatctt agagctaatt agagagctta taaaactcta atatttttta acacagataa
      661 attttaacca aatccgctta gcataaactt aaacaactat acaacgccga gattgcggat
      721 ttgctcggct tttcttaagc tcctttaatg cttaaatggg gcaactttaa aactacttat
      781 tttacattca tgagaatttg tcttttttgt tttttagttt ttattttcct ttttaataaa
      841 gaactcagtt gctcctttta agcattattt tagaaggaga aaaaatgaaa gcttatcata
      901 caaaagaaca agtcatcatt aaacttagca aagatgaata tcgaaaagaa ataaagttaa
      961 ataaatcttt aaaagatgaa aacaaatctt taaaagatga aatttctagt cttgaaaatg
     1021 aaaaaataga acttttaaaa gagttaaaag atcaaataga agcgaatatg gaaaatataa
     1081 aagagattag ctctttgcaa aataaaattt atgagcttct ttatgcaaaa gaaaggtcga
     1141 aactatgttc ttgaacagta aaaaaaatga aaaaataaca tatttagaaa aagaaattca
     1201 aaggctaaaa ggtgtaatag cattaaaaga tactgctata aatgaaattt cattgaagct
     1261 agaagaagaa attaaaatca atgtaaaact tagtaatttt cgtataaaaa tacttgatgc
     1321 tttagggctt ataggcgttt ttaaaaacga tgataaggct attaaagaag taaaaagact
     1381 aaaggagaat gaatgcaaat aacatccaaa aaacaagaaa aaatagtttt aggactatta
     1441 ttaaaaaatg gaactgtaga taatttttat tgtattgata aaagaatcac tacaagactt
     1501 ggtgcttata tttataatct tagaatcaaa ggttatgaaa tagaaacagt tagaaacaaa
     1561 gaaacgagaa atacttttta tattttaaaa agtgctccaa aaataaaaaa ggcaggataa
     1621 aatgaattgc agaataattg acttagaaca aggtagccat gaatggttaa attttagaaa
     1681 aggaaaaata ggtgcatcga tggtagcatc ttgcgtaggt atcaaaggtg cttttaattc
     1741 caaagaagaa gcaaaagata tcatcttggg acttaaagaa gtttatcaaa atgaagctat
     1801 gaaaaaaggc aataactatg aagctttgat tagagctaga gttgagtttt tacattccgt
     1861 gagtatcact cctgtagttt tgcaaagtct agaaaatgaa atgtttatag caagtttaga
     1921 tggaatggat gaaaacggcg ttatttatga gtttaaatat tcgcaagatg agtatgattt
     1981 tatcaaaaga aataaaaagc caagtgataa atactacgct caagtgcaat ttcaactcta
     2041 tatcagtggt aaagaaaaat gcatttttgt agccatgaat aaagaagaag agattgtaga
     2101 gtgcgaagtt tcaaaagatg aagcttatca agaatggttg gttaaaaata taaagcaatt
     2161 tatattagat tatatcatgg atcaaaaaag tgaatataaa gagcttgaag atactaaagc
     2221 aaaaaatcta acgattgaaa ttataaggct tgaaaacacg attaaaccta ttaaagaaaa
     2281 gctagaaagt cttaaaaaag aactcatagc cttagcaaat ggagaaaaag caagatgttt
     2341 ggatattaca atttatctgc aaagtagaac tacaattgat tataagggct ttttagagca
     2401 aaaaaatatt actgtgccta aagagtttta taaagaaagt atttcaatgt gtttaaaaat
     2461 caaaaaagga gcataaaatg agtaatgaaa atatggaagt ggctatagta gaagaaaaag
     2521 aaactcaagt aaaagaattt aaagaaaata atcatattgt tatcagtgaa aaattcgaaa
     2581 atgaattaag gttaataaac gaaaaatttt caggcgaaaa taataaggtg atgcaaattt
     2641 taagagacaa taaaaccgca tcttttttaa aggtcaaaaa tcttagcgag gcagggctta
     2701 gtattttaaa caatgattat tatatagtgc ctatgggcaa taatgtaaat atagagccta
     2761 gctatatggg acttgtcaaa gttgccataa atgaggcttt aaaacgagga tttgaaatta
     2821 ttgttaagag tgatacgatt gcaaatagcg atgaagtaaa aatcataaca gaaaatgaaa
     2881 tcgacaatct aagcattagt aaaaatcctt tagacaattc gataaaaggt gcatacgctt
     2941 taatttctat agttaaaaac ggtaatttgc tttatagaaa agcggagttt ttaacaaaag
     3001 agcaactaga tatcataaaa agcaaaacct tcacaaaagg cggtggagtt tataaagaat
     3061 ttcctgaaga aatggcaaga aaatcggcta ttagaagggc gattaaacac attggctatt
     3121 ttataaaaag cgatgttcta gatggagtta tcaatatcga caatgaaaat tataattttt
     3181 caaattcaaa cttaaaagca atagatgata aaaaagaaca aattaataat tctattaaag
     3241 aattaaaaga gataaaagat cagtatgatg cctttattaa agaaaatggt atcagcaaaa
     3301 aagaaagcga agaatttatt cttaaatata atatttttac aatagaaaaa tttcaaaatg
     3361 ttttagcaaa caaagaaaaa gcaataaaaa caattaaagg agaattgtaa tgttaccagc
     3421 atttaaggca agttttgaag tggcaaatta ttcgccaagc gtagagtatt taagtgaagg
     3481 tgggctttat agcggagttt tccgcaaagc ctttttatat gataaattgg caagtgatgg
     3541 aagcaataat acttttattt gttttgaatt tttaactaga aaagagcaaa aactagctat
     3601 ttttaatctt tttgtagcta aaaataacga ttttagctat atcaataaaa atggtgaaaa
     3661 agaaaattat ttaggattta gacaattaaa cgctattatg aaattctttg gaattgatga
     3721 acttgatttt agtgaaaagg gaaatgagaa tgtttttgga gtgcagactg aagttattta
     3781 tctaaattct ttagttaata aacttttagt tttaggtttt gggacagaag aatatttaag
     3841 taaaaatgga gaaattgcta acaaaatttt tcttgataga atttttaatg aaaagatgca
     3901 aagcatggat gagtttcaaa ataataaaga gcctttatct ataaaatctt ttaaagcaag
     3961 gcataaatct ttaaataacg acaataataa atcatttatt ccaaaagaaa atcaaagcta
     4021 taatccttat ggaaatgaag taaaaaacaa taacaatgaa aaatatatcg aaataggaga
     4081 tgatgatgaa agtttgccgt tctaattatc ttgaaattgt aaaaatcata ccatttagcg
     4141 aaagaagaac ttgtttttgt gattttgcta aacaaaatga aataaaaatc gagaaaataa
     4201 attataaaaa tcacataagc aaaaaagaac tcagaaaggc ttacaaaatt tacaaaagta
     4261 agccaagtgg aagaaatttc tttcatgaaa aaaagcttat tgttaaagct tttgaagatg
     4321 ttgagaaatt tttaaggagc gagaatgaaa ttaaaagatt ttgattttag gatttggaat
     4381 ggtaaaaaat atttaaaaca gaaaatatac aatgataata taaacaataa tgagtatatt
     4441 gcagttacag ggaatattga tgatgagaac tatgttttta ctatagaaca cggttgtgaa
     4501 agagattatt acggtggaga ctacgatgaa tattgtaaag ttaaagactt tacaacatgt
     4561 aattatgaaa tagaactatt tacaggattt tacgataaaa aaggaaataa gatttatgaa
     4621 ggggatatcc tatattcttt tgaaggttgt tctgaaggtg aggcttttaa atataaagct
     4681 gttttaaaag aaggagcttt ttatttagtt gaatgtggtg atgatggtga agaatatgat
     4741 gaagatttaa taagtgagtt tcgtttagaa gaactagaaa ttgtgggtaa tatccacgaa
     4801 aacgcggagt tgctaaaatg aaattagttg acaagcttaa aaaagcttat gattacaaaa
     4861 aagagcttta taaagccgaa aaaggctcaa gctctaaaga atatcacata gaaaacgccg
     4921 agatattcca agattttata gaattagaat tattgcaatg cgaagatatc gaaagaagat
     4981 gttttttaat gcaaatttat agatatggtt atcaaaacat aagatcttta aactcaaaat
     5041 tagcttttaa agcaaaactt gataatgatg atatcaactt tataaaaata ctaaaagaag
     5101 ctaatatctt gcatgcttta aatgagattt ataccacaaa agaagttaaa aagatagcaa
     5161 aggattaaaa aagatgacag aaattcaatt taatgaaatt aaagaaagat tgaaacaatg
     5221 gagacaagaa agacatttaa cctatgaaaa tcaaagaaaa gattttttag gtaatgtttt
     5281 tgaaaaagca agcgagtatt ttagagcaaa agatgattta gaaagagttg aagcactttg
     5341 tgacatagca gtgttttgtt ttaacgcttt tgatattata gattttgatt attactgcga
     5401 attttgtagt aataatgaaa atatagaaat atataacctt actgatgaga ttagtgaagt
     5461 ttgttgcaaa gtaattaaaa aattgcatgt aaaaacatct atacctagaa ttatatctta
     5521 ttgtcaatat ctttgtaaaa acttaggttt tgacttctat aaatgtatgc tagaaaaaat
     5581 taaagagatt gaaagtcgta caggatttta tgatgagaga ttaaagaagt ttgtagatac
     5641 aatatgtgct ttcagcaaag atgaagctct tagcaatgta tctaaagatt ttgggttttt
     5701 aggaaattca attatttata aattaacaca agaagataaa aacttctggt ttataacttg
     5761 taaagaaata gaaactaatt tacagataga ttataaagtt aaaaaaatct ataaagctga
     5821 ttataaaagt tgccggttat aaaaatgtta aatatcatct tagttttact ttttgtatta
     5881 tttttcattc tgatgttttt taactataaa tatcaaaaag cacaagttga gcttttagaa
     5941 aaaaagaatt aaggagttaa aatgggaatt ttaaaaagac ttgatgaaac tatcattatc
     6001 gaaaatgata ggaaaagcga aaaagaatta gttgagtgtt gtattttaga agggatttct
     6061 ttaaataatg caaacttgga aaatataaat ttaagtgaat tagattttaa taatgcattt
     6121 ataaatggtg ctagttttaa aaacgctaat ttaaatgata tttcaagcaa gaatgcatct
     6181 tttatagatt gtgatttcag tggagcaagt tttcattttt gtaattttct aagaacagaa
     6241 tttgaaaatt gtatatttga aaatgtagat cttagggatt gtataggaga tatgaaaaat
     6301 atctttagcg ttgtcttgga tacctatgtt atgactttta caaaaactat gatgaattta
     6361 ggttgtgata ctaaaacaat aaaagaatgg cgtaatttaa gcgttgatga tttagaagat
     6421 gaagaacaga aatggctttg gaattattac aaggatacta tttttgaaat tatagataaa
     6481 agattaggag ttgaaaatgg ttaaaaaata ttttagagaa aaagaattga gcgaatattt
     6541 aggagttagt ataacatcat tatttaagtt aagacaagat ggtaaaatac cttacattcg
     6601 cataggaaaa tccataagat atgaaataaa agaaatagaa aaatggctta aagctaaaag
     6661 acattaaaag caaaactcac aaagagagtt taagtaattt ccataccatt gcataagttt
     6721 tactcttaaa tcaattgcct tggctctgtt gtaagccctt tctatttcat taccgcttat
     6781 atgatgtaat atcatttctg ctatatcttt actaatacct tgctgaatta actcattgct
     6841 tttattagta taaacacttc taaaagtaga acgatatcca tgtatagtgt gctctaaatt
     6901 ataaaattta aaaaatctta cagcaaaatt ctcgctaata gttccattat tattagcgaa
     6961 aatatacttt ttatctccat ttaaaattct ttgcatatct agtatcttta aagcatattt
     7021 atttaaaggg ataatattat caccattaga tcttactttc atttcatctg cttttataat
     7081 ccaaagattg ttttcaaagt caatatcact ccatttagca aatcgaatat ttttacttct
     7141 ttgtgctgtc aaaagcgtaa aataaattgc attaattata gttgtatttg tccgtggatg
     7201 atttttatat tctttcatac attctaacat atttcttatt tcttgttctt ctactatagc
     7261 tttaaaatgt ttaactttat tgtgatttgc ttcattgtaa aatttcttta aatctttcaa
     7321 ttgaagtatt atatctgttt ttaagtcacc tctttgccta ctaatctcaa atatcctaca
     7381 tagcaaagat atatttttct ttattgtttc gtatattcct tttttctgca ttaaatcata
     7441 aataggtaga aaatcatctt ttttcaattc atttatatct ttttgtccca aagtgggaat
     7501 aatatatttt ttaaaaattg actgttcttt tttaattgta gctgaattta attttttaga
     7561 ttttatatca acataaagaa aatttgcttt ttcaagtgtc ataaccttat catttttgcc
     7621 gataaatttt ccatcataca ttgattttaa aagatctttt gctttttctc ttgcatttgt
     7681 aacatttaaa acaccttttt ggcattcccc tattgttata aaatttttaa attttgaagc
     7741 tcttaaataa aaaacttttt tacctgttgg attaactcgg acatataatt cttttggttc
     7801 tcctacgcta atcatatacc ttttatcttt tatttctaaa ttgtctatat ctttttgagt
     7861 tagcattaaa aaaacctttt tttagtattt ttgtagccag aattagcttt tttactttgg
     7921 ctacataaat ggctacagaa ttataagaaa aaatagaaaa aatttcaatc ataatgaaaa
     7981 attttaatgt agaaaagttg ttaaaatagt gtattttgta tcttaatatt acttaatgaa
     8041 ttactacttg gtgtccacgg cgagattcga actcacggcc tcaaaattag gaattttgcg
     8101 ctctatcctg ctgagctacg aggacagaaa gcgggaaaaa tcccgctaaa aatttaaccg
     8161 tttctttttt tgatgatttc atccgcaaca tttttaggaa cttcatcata gtgatcaaat
     8221 tccatagaat aagtcgcacg accttgagtt tgacttctaa gatcagtaga ataaccaaac
     8281 atttcagcca aaggacaaaa tgctgtgatg attttatttc caccacgctc atccatgcta
     8341 tttacttgac cacggcgttt gttaagatct ccaataacat cacccatata atcttcagga
     8401 gtttctactt caactttcat cataggctct aagatcacag cacctgcttt tctagcacct
     8461 tctttaaagc ccatagaagc agcaagttta aatgccatct cagatgaatc cacctcgtga
     8521 taacttccat cataaacagt tactttaaca tcttccacag gataacctgc taaaacacca
     8581 ttttgtaatg cttcttgaac acctttatca actgcaggaa tgtattcttt tggaattacc
     8641 ccacctttga tatcattaac aaattcatat ccactacctg gctcaagtgg ttcaaggcgt
     8701 aagaatacat gtccatactg accacgacca cctgattgtt tagcgtattt gtattcttgt
     8761 tcaacagttt ttctaatagt ttcgcgataa gcaacttgtg gttgacctac ttcagcttca
     8821 actttaaatt cacgaagcat tctatcaacg ataatttcaa ggtgtaactc acccatacct
     8881 gaaatgatag tttgaccact ttcttcatct gtagaaactc taaaacttgg atcttcttgt
     8941 gctaatttat ttaaagcaat agacattttt tcttgatcag ctttagtttt tggctcaact
     9001 gcaacagaaa taactggatc tggaaaatcc attctttcaa ggattacctt atctttttca
     9061 cttgcaagag tatcccctgt taaagtatct ttaagtccta caacagcacc aatttcgcct
     9121 gcgtaaagca ctttaatctc ttctcttttg ttagagtgca tttttaacaa acgaccaatt
     9181 ctttcttttt tatctttagt tgagttatat gcataagaac cgctttctaa acaaccgcga
     9241 taaacacgca cgaaagtaag ttgtcctaca aatggatctg tcatgatttt aaatgcaagc
     9301 cctgcaaact cgccatcatc agttgatttt acagaaactt ctgtgccatc ttcatattca
     9361 cccttgatat ttgccacttc atcaggagct ggcaaataag ccacaacagc atcaagtaaa
     9421 ggttgaaccc ctttattttt aaacgctgta ccgcaaagca taggaacgat agaaagactt
     9481 aaacatcctg ctttaatccc tgttttaatc tcttcaaggc ttaattcttc tccgcctaaa
     9541 tatttttcca tcaactcatc tgaagtttca gaaactgctt ctatcatttt tgtgcgatat
     9601 tcttctgcct tttctttaag ttcagctgga atttcttttt ctacataatc cgttggctta
     9661 gtatcatctt cccaaactaa agctttcata gttacaagat cgattacgcc tttaaaatta
     9721 tcctcagcac caattggaat ttgaagtgga actggattag cttttaaacg gttgcgaatt
     9781 tgatcttcta cattataaaa atttgcaccg attctatcca ttttatttac aaatactatt
     9841 cttggaacac cgtatttatt tgcttgtctc caaactgttt cactttgagg ctgcacccca
     9901 cccactgaac aaaataccgc aacagcacca tcaagaacac gcatagatct ttcaacttca
     9961 attgtaaaat ccacgtggcc tggagtgtca ataagattga tttgatgatc tttccaaaaa
    10021 caagttgtag ccgcagaagt gatagtaatc ccacgctctt tctcttgttc catccagtcc
    10081 atagttgcag caccatcatg aacttcaccg attttatgac tcatacctgt aaagaaaaga
    10141 attctttcag atgtagtcgt tttacccgca tcaatgtgag cagcaatacc gatatttcta
    10201 acttttttta aaggagtact tcttgacata cacactcctt cttaccaacg atagtgagca
    10261 aatgctttat ttgcttcagc cattttataa gtatcttctt tcttcttaaa tgaagcacct
    10321 ttgctatttg ctgcatctaa aagctcagct gcaagtttat caatcatagt tctttcgctt
    10381 ctttttcttg caaaagaaat aatccaacga atcgccaaag cttgttgtct agcaggacga
    10441 acttcaactg gaacttgata agttgcacca cctacacgac gagattttac ttctaataaa
    10501 ggcttaatat tttcaatcgc atcattaaaa atatcaatac cttttttctc gccacctttt
    10561 ttatcaatag cttccaaagc accatacata attgttgtag ctgtgctttt tttaccatca
    10621 tacattaaag aattaataaa ttttgtgatt actttattac cataaatcgg atcaggcaag
    10681 acttctctta ccggagcttt tcttcttctc attatttttc cttcaaattt taaattttac
    10741 tcaaacaaaa tcaaatctaa cggatttgtc tgtatgaatg attattttgc agtgcctgct
    10801 ttagggcgtt tagcaccata tttagaacga gaaactgttc tttttgcaac acctgctgta
    10861 tcaagagcac cacgaacgat gtgatattta acccctggta agtcttttac cctaccacca
    10921 cgcactaaaa caatgctgtg ttcttgcaag ttatgacctt caccgccgat atagctgatc
    10981 acttcaaagc cactagtaag tcttactttg gcaacttttc ttaacgctga gtttggtttt
    11041 ttaggtgttg tagtataaac cctagtgcaa actccccttc tttgtggaca atttttaagc
    11101 gctggagatt tagatttttc taaaactttt ttgcgctctt ttctaaccaa ttgatttatg
    11161 gtaggcacaa taattccttt ctttaaaaat gtaataaact ttggatgata tctaaatttt
    11221 gcttatattt tagttaaaaa gattgaaaat gaagaaatat agcccagaag ggctataaaa
    11281 tagagtttta ttcttgttct ttaagtttta aattttgttc accataaagc cctgttccaa
    11341 caggtatcat tctacctaga ataacatttt cttttaaatc ttctaagtag tcaaatttac
    11401 ccgctatact tgcttcggtt agaactttag tagtttcttg gaatgaagct gcagaaatca
    11461 cactatcgct tccaatcgct gctcttgtta cacctaaaag cacaggctca gcaatagcag
    11521 gttctccacc cattctaatg attctttcgt tttcttcacg gaatttacgt cttgaaacca
    11581 aatcaccctc gataaatttc gtatgtccac tatctacaac ttttacttgt cttagcattt
    11641 gagaaacgat aacttctata tgtttatcag aaatcacaac accttgtccg cgataaactt
    11701 gttgaatttc agaaatcaaa taataatgca aggctttttc acccaaaatt ttaagcacat
    11761 catgacttga aacaactcca tctgtaagtt tttcacctgc atggataaac tcgccatctc
    11821 ttacttgaat atgttttgat ttatcgatta aatactcagc gcttgttcca tcttctgctt
    11881 ggataatgat tctttcttta gaacgcaaag gtttatcaaa acgaacaaca ccatcaattt
    11941 ctgcaatcac agccgcattt tttggttttc ttgcttcaaa aagttcagaa actcttggaa
    12001 gacctcctgt aatatctttt gatttagctg cagcttttgg agtttttgct aaaatatctg
    12061 cttgagcgat tttatcacca tcatgaacaa aaataacggt ttttggttca agctgataac
    12121 gcacagcctt atcacctttt cctgcgatta ccaaagttgg tctaactccg cttggcaaat
    12181 actcattaat cactaaagaa cgcttacctg tagcttcatc aatttgctca tcagcactat
    12241 aacctgcttc aatatcctca aagcttacaa caccatcaat ttctgcaatg atagtattat
    12301 tataagcatc ccattctgca atcacttttc tttctttttt aggagcactt gcaatgatag
    12361 tatttgcatc atcgattttt tcactatcgt taaattctat cttagattct cttggaatat
    12421 agtgtctttt tgcttctcta tcattttcat cagcaatcac tacaaagaat cctttttctt
    12481 taacaatatc gcctttttta acatttttta ccctatctaa accatcgtct ttaaggatat
    12541 aaaatttaag cgttcctttt tcgcctgctt tgatattttg aactacaggc tcaccatctt
    12601 ctactaaaat ttcactcgca aaagggatac gatttggtac attccaaccc tctttaatca
    12661 cttctacgat actttcattt tcttctactt gcataccact ttgatatggc aaataaagtt
    12721 ttccatctat actgccactt acacctgcta attcatttgg tttagcaaga tcgtattttc
    12781 ttagtatgta ttttacttct tgttttttat ttttaataga aacaatcaca tcttcatgaa
    12841 tattttctat attaatcaca cctttaaatg gagttttgat ttttggctcc acaagtaaaa
    12901 ttgccgcatt tctacgattt gctacgatat ttttaccttc tttattttta taagttttaa
    12961 gattataaaa tctgataaaa ccttcttttt gtgcgcttac ttgtctatct tgtaaatccg
    13021 tacttgcagt tcccccactg tggaaagttc ttagagttag ctgcgttcct ggttcaccga
    13081 tagattgagc ggaaataatt cctactgctt cgcctggttt taccaattta ccttcaccaa
    13141 gattgatacc ataacatttt gcacaaattc cttttttagc tttgcaggta ataggagtgc
    13201 ggatattgac actttttata ccgctttctc caagaatttt tgctttttcc tcatccatta
    13261 aagtaccttc tgcaaaaagc acagaatttg taataggatc aatcacatct tcagctaaaa
    13321 ccctgcctaa aattctttct tctaaagttt ctataataga gctatctgcg gtaatttcat
    13381 tgatttcaac accctcatgc gttccacaat cttcaatggt aatttttaca ttttgcgcaa
    13441 catcgatgag ttttcttgtc aaataacccg catttgctgt tttaagagcg gtatctgcta
    13501 gaccttttct agcaccgtga gttgaaataa agtattcaag aacattcaac ccttcacgga
    13561 aattcgaaat aataggagtt tcgataatag aaccatcagg tttagtcata agtcctctca
    13621 tcgcagcaag ctgagaaatt tgagccgcac tacccctagc accagaatct gccatcatat
    13681 aaatagagtt aaaaccttct ttatcttttt ctacaagctt catcatctct tttgaaagga
    13741 cattatttgt actcttccaa atatcgatga ttttgttgta tctttcccct gaagtaatca
    13801 aaccaagatt ataagaattt tgaatttctc ttacttgttt ttttgcttca tctatagctt
    13861 tttgcttgtc attaggaaca ataatatctg caattgaaat tgaaatacct gctttagttg
    13921 catactcaaa acctaaattt ttgagtctat ctaagaaact tgctgtaatc tccaaaccac
    13981 cttgtttata aacataatcc acaagcgcgg caatgtcttt tttctttaag actttattcc
    14041 agctattttc aggcacaaaa tcaggtaaaa tggatttaat aatcaatctt cctgctgtag
    14101 tggtaatctt tctaccatct accatggttt gtatactcgc atgaatatct aaacacttac
    14161 tttcaagtgc catcatcact tcatcaatgc ctgtacaaat tttatgcgaa cctttagcac
    14221 ctgctttttc taatgaaaga taataaattc ctaaaaccat atcttgcgat ggaacggtta
    14281 cagacttacc gcttgctggc aaaagaatat tcattgatga aagcataagc actttacatt
    14341 ctgcaatagc ctcttgagaa agcggtacat gcactgccat ttgatcccca tcaaagtctg
    14401 cattaaatgc tgcacaaact aaaggatgaa gttgtatagc cttaccttcc accaaaacag
    14461 gatgaaaagc ttgaatagaa agtttatgta aagtaggtgc acggtttagc ataacaggat
    14521 gcccttttac cacttcttct aaacattccc aaacttcatt agttttattt tctatcattt
    14581 ttttagcttg ttttactgtg gttgcataac ctttttcttc aagtttagct aaaagatgtg
    14641 gtttaaaaag ttctaaagcc atttttttag gcaaaccaca ttgatccatt ctaagttttg
    14701 gacccacaac aataacgcta cgacctgaga aatccaccct cttacctaat aagttttgtc
    14761 tgaaacgtcc ctgtttacct ttaataattt cacttaaaga tttcaatggg cgtttatttg
    14821 ctccctttac agcattagca cgacgaccgt tgtcaaaaag tgcatcaaca gcctcttgaa
    14881 gcattctttt ttcatttctt ataatgattt ccggtgcatc aagttccata agttttttaa
    14941 gacgtgtatt tctattgata acgcgacgat ataagtcatt cacatcagaa actgcaaatt
    15001 ttccaccatc taaagccact aaaggacgca aatctggcgg taaaactgga agatttgtaa
    15061 tcatcatcca ttcaggacga tttggtacgg cttcatcgct atcggcattg gcgtttaaat
    15121 ttgaatttaa gaaattttct acaactttta agcgtttaat gatagttttt ttcttagcct
    15181 ctgaatttgt agccgccatt tcttctttaa gctgatttaa aagtgctaca agatctaaat
    15241 ttgcaagtaa atcacgaaca acttctccac ccattcttgc tttaaagcca ctattttcat
    15301 agcgttgcat taaattttga tattgctctt cgtttaaaac atcacaatat tctacttttt
    15361 tggtgctttc attatcatag aaagcatcac ctgggttttc aacgatataa gcttcataat
    15421 aaagcacacg ctcaagatct ttcatcttaa cacccaaaag cgttcctata cgacttggaa
    15481 gagaattaac ataccaaata tgagccacag gagttacaag ctcgatatgt cccattctag
    15541 aacgacgcac ttttgaattt gctacttcaa cgccacattt ttcgcactta acacctttaa
    15601 aacgcatttt tttatacttg ccacaaagac attcataatc tcttataggt ccaaaaatct
    15661 ttgcacaaaa aagcccatct ctttcaggct ttaaggttct ataattgata gtttctggtt
    15721 tttttacttc tccataagac catgatttga ttttttcagg acttgcaagt cttagttgaa
    15781 acgcttcgaa atccctaggt cttgcatctt ctttgatttc tattacttta aatttactca
    15841 ttatcttcat ccttatcaaa aatctcaaca tctaaagcaa gagatttaag ctcattggtt
    15901 aatacaaaaa atgtttcagg aattcctgtt gctggaacat tttcaccttt tgtcaatgct
    15961 ttataagcac taaatctacc ttctacatca tctgatttga tagttaacat ttctcttaaa
    16021 gtatgagccg ctccataagc ttcaagtgcc caaacttcca tctccccaaa tctttgtccc
    16081 ccaaagagtg ctttaccacc cacaggttgt tgggtaacta agctgtaagg tcctgtactt
    16141 cttgcatgaa ctttctcatc aactaagtgg tggagtttta gcatatacat acatcccaca
    16201 tgaacacgct ctgcgatttt ctcacccgtg cgtccatcat aaagttctgt tttgccgtcc
    16261 atatctatct tggccatttc aaaaagcttg ctaaattctt ctatatttac accttcaaaa
    16321 acaggagtag caaatttaac tcctttactc cagtctctag catagtttaa aagctcttca
    16381 tcgcttaagc ttttaataaa ttctttttcg cttgcaagtc ttggaataga acaaatttca
    16441 agcatttttg ctcttaattc tttaagaaaa tctttttgct ttctgtcaaa aatttcttga
    16501 atctgatctc cgagtctaag tccaattaaa cccaaatggc tttctaaaat ttggcctata
    16561 ttcatacgac ttggaacgcc aagtggatta agcgcaatat ccacgctttt gccatttggt
    16621 aaataaggca tatccacttc aggaactata gttgaaacta tacctttgtt tccgtggcgt
    16681 cctgccattt tatcaccgac tttaagcttt ctctttgtag caatataaac tttaacaagc
    16741 ttaattaccc cacttggtaa aatatcatct ttttctaaaa tttcaagctt ttcatcgtgt
    16801 tctgctttta attttttctt ctcattttgg aaatgatttt ttaaatcatc gtattctttt
    16861 tgaatctctt tagaataagc tttaatcaaa gttgttaaag taaaacgatt gattttttca
    16921 agttcgctaa tatctgcagt ttgtcctttt ttataatttt tatctccaat tttttgatca
    16981 ctatttaaag gggctttgga aagaagagcg caaacacgaa gcatttcttc tctatccatc
    17041 atcaaaagtc tatcatgatg ttctttttct aaagccattt tttctttatc ataagatttt
    17101 attgcgcgat catctttttc atagcctttt ttagtgaaaa ttttaacatc cacaacaaca
    17161 ccctctaaag aagcggttgc ataaagggat ttattcacaa catgtcctgc tttttctcca
    17221 aaaatagctc ttaaaagtct ttcttcagga gttggtttaa cctcaccttt tggagaaacc
    17281 ttacccacca aaatcatacc tggtttgata tgagtaccaa tttttgcaat accgctctca
    17341 tcaagatgtg caacatcttc ttcttttaca tttgggatat ctttggtaat ttcttctata
    17401 ccgtctttta gttctcttgc ttcaatttct ttttcataaa tgtgcacgct tgtaaaggta
    17461 tcttcacgaa taattctctc acttacaact atagcatcct catagttata accattccaa
    17521 ggcataaaag cgattaaagc atttttacct atagcaagtt cgccttgatc catagaagga
    17581 ccatctgcga taatttgtcc tgcttttact atatcacctt ttttaacaat aggatgttga
    17641 atataatttg tattttgatt ggttcttaaa tttttctcca tagtataatg gtcaataaat
    17701 ggacctttat catcttcacc taaaatgaaa atgcttttat tatccacttt ctcaaccaca
    17761 ccgccacgct ttgctttaac agcttcccaa gcatcacgtg caataatttg ttccatgcct
    17821 gttcctacta tcggagctga agcagtaaga agtggcacag cttgacgttg catgtttgaa
    17881 cccattagcg ctctgtttgc atcatcgtgc tctaaaaacg gaatcaaaga agccgcaacc
    17941 ccaacaacca tacctgagca aagatcaatt aattgcactt cttcgcgtct tgcaagtata
    18001 gtttcaccat cttgtctagc ctcaacaaat tcttctacta tattgccttt agcatcaacc
    18061 ttagttgaag ctggtgcgat aaacaagcct tcttcttgtg tcgctgtaag ataaacaact
    18121 tcattagtca ctttaccatt tacaactttt ctatatggcg cttcaacaaa gccaagttca
    18181 tttacttttg cataagtaga aagagtgtta atcaaaccaa tattttgacc ttcaggtgtt
    18241 tcaactggac aaattctacc ataatgtgtc gcgtgaacat cacgcacttc aaaacctgct
    18301 ctttctttta caagtccacc ttcaccaagc gctgataaac gacgcttatg agtaacctcg
    18361 cttaaagggt tggtttgatc cataaattgc gaaagctgac ctcctgtaaa aaattcaatg
    18421 atagttgtag taatcatttt aggattgatt aaatcataag gcattacttt atcaagatcc
    18481 gcatttaaag aagtaaattt atctctgatc gccttttgca tttttgcaag acctaaatga
    18541 agttcattgg ccaaaagttc acctatagaa cggatacgac gatttcctaa atgatctcta
    18601 tcatcaatat gtcctttacc attttttact ttaattaaat attttgcagt tttaataata
    18661 tcttcattag tcaaaacagt aacatactca ggtacttcaa gacctaattt atggttcatt
    18721 ttcatacgac ctaccttggt aagatcgtat ctttcaggat tgaagaataa atcatttaca
    18781 aaagccttcg ctgcatcttt taccacaggt tcacctgggc gcataacttt gtaaattcta
    18841 atcgcagcta aatcattttc atcatcgata ttttcacttt gtttaagaag ttttagagtt
    18901 tctccatctt gagcaaagga gttaataatc gctgcatcaa cgccattagc caagtcattt
    18961 gctatatcaa aacttttttg ctctttaatc ttagcaagct tactctcatc taacaaagtt
    19021 aaagaatcaa ataaaacctc tccactttct ttatcaataa taggatttgc taaataacga
    19081 ttaagtaaaa tttctacagg atattctatc cattttaaac cgtctttaat aagctgttct
    19141 gcttttttct ttgtaagtct ttttccagct tgatgaacga tttttccttt ttcatcttta
    19201 atatcatatt ctattctatc cataaaatca tttggattaa attctgttaa aaatttatct
    19261 tttttcacat gtatagtctg aataggataa aacaacttaa taatatcttg ttttttatac
    19321 cctaaagctc taaaaagcat agttacagga acttttctac gcttgttgat tcttacatac
    19381 aaaacatctt tggcatcgta ttcaaaataa agccacgaac cacgatcagg aataatttgt
    19441 gctgtataaa caagcttatt tgcaaccgtt gagctttctt cttctttaaa aataacacca
    19501 gggcttctat gtaattgatt tacaaccacc ctctcaaccc cattaatgat aaaagataca
    19561 cgatctgtca ttaaaggaat ttcgcggata taaatttctt gttctttaat atcttttacg
    19621 ccaacttttt cccctgtttt ttcatctttt tcatgcagag taagacggat tttcattttt
    19681 aaatttacag aataagtcaa acctctttcc atgcattcgc gaatggtata ttttggcttg
    19741 cctatttcac tactaacata ttcaagactc aatctatttt gcggatcatg aataggaaaa
    19801 attgatttaa aaactttttc tataccactt tcaccattat caagatttaa aaaataatca
    19861 aaactctttt tttgtaattg tagaagattt gggatttcta tttgttttga aatgtttgag
    19921 aagtctactc ttaaacgatt tcctaattta ttatctaaca tatcgcacat acctcatggt
    19981 aaattttgta aatttaaaaa agaagaccta aaaattaggt aaaaataaaa aaagaagact
    20041 tgccttgaca aatcttcttc taactttaaa gcttaaaatt acttaagttc tactttagca
    20101 ccagcttctt caagttgttt tttagcttcc tcagcttcag ctttagccac accctctttt
    20161 agagttgaag gagtttgctc aactgcatct tttgcttctt taagaccaag gcctgtaaga
    20221 gcacgaacga ttttaataac ttcaatcttt ttagcaccgc catcagttaa aacgatatca
    20281 aattcagttt tttcttcagc agcagctgca gcaccaccag ctgcagcacc accagctacc
    20341 attacagggg cagcagacac accaaatttt tcttcaaatt cttttacaag ttctgataac
    20401 tcaagaacac ttaaatttga aatatattct aatacatctt ctttagaaat tgccattttt
    20461 tatcctttta tttaatttat tcagattctt ttttattttt aagcgcattt aaacctattg
    20521 tgaaattggt aattggcgca ttccaaactt gcaaaagcat agcaagcaac tcattgcgtg
    20581 aaggcatttt agcaagagct ttaaccttag caacatctgc aacttcgcct tcaatataag
    20641 ctgttttgat ttcaaattta tcgttatttt cttcaaattt agcagctact tttgaaacac
    20701 ttagctgatc ttcgccccaa agataaatat ttgtatcttt aagaactaga cctgttttac
    20761 cggaattgtt aagagcaatg ttagccaaag tatttttaac aatttgaact tttacattgt
    20821 tttctcttgc attatttcta agctcttcta gtttttttgt gctaagacct ctgtaattac
    20881 aaactacaat agcttcacta gctttaaaac cttcttcaag tttagcaata atctcaactt
    20941 tttcgcttct agtcacattt tctcctttcc gattgagatt tcaagtagag tggaaatcca
    21001 attaagctta cgcctcgact atcttcaatc taaaataaac atctcaaaaa atcaaaaatt
    21061 ttttcaaatg tttattttag aacaaaagag ttgcaaaaaa gcaactctta tttcatatca
    21121 agcaattctt gtgtttcaag ctttacagaa gggctcattg ttaaagataa agccgcattt
    21181 ttaatatatc tacctttagc tgcggcaggt ttatgtttgt taattgcctt tacaaaagtg
    21241 ctaacattgt cccataattg ttctttggaa aaacttactt taccaagacc tgcatggata
    21301 tttccttgct tatcaacacg gaaatttacc tgaccacttt ttgcattatt aactgcttga
    21361 gcaacatcca tagtcactgt tccggtttta ggatttggca ttaaaccttt tgggcctaaa
    21421 attctaccaa ctttaccaac aagtcccatt aaatttggag tagcaatcaa aacatcaaaa
    21481 ttcatattac ctttttgaat ttcttctact aaatcatcgc tacccacaat atctgcacca
    21541 gcatttttcg cttcatcagc ttttgcgtct tttgcaatta cagcaacacg aactttttta
    21601 cccgttccag caggtaaaac gacagatcct cttaccattt gatctgcatg tcttggatca
    21661 acattaagtt ttaaagcaat ttctacagtc tcatcaaatt tagcagactt taaagtcttt
    21721 attgtatcaa ttgcatcgct taaagcatac tctttatttg aatcaatttt ttgtgataat
    21781 tcttttaatc tttttgctat cttagccatt tattttctcc gcattttaaa gtgctaccgc
    21841 cttttacctt ggcggtgaaa ggattaatct acgatttcaa cacccataga acgagctgaa
    21901 cctgcaataa ttttagcagc ttgatctcta tctttagtat ttaaatctgc aattttctta
    21961 tctactattt ctaaaacttg agcacgagtt aacttaccca ccttattttt aagtggatta
    22021 tccgtacctt tagaaattcc agctgctttt ttgatcaaat ccgtagctgg cggttgtttt
    22081 gtaataaaag taaaactttt atctgcataa acagtgataa caacagggat attaaaacct
    22141 gccatatctt ttgttctttc attaaaagcc ttacaaaact ccataatatt aacaccttgc
    22201 tgacccaaag caggaccaac aggtggtgat gggtttgctt ttgtggcagc aatttgcaat
    22261 ttaatttcgc ctacgacttt tttagccata acaaatctcc ttacttgata taaattaaat
    22321 tattttctca acttgagaat ataagatctc cactggagtt gagcgtccaa aaatagaaac
    22381 atttaatttt aataaaccac gaaccatatc atactcttct acaattgcag taaagtttgc
    22441 aaatggccct tctgtgattc tcacattttc cccttcttca aaagaaatct ttggtttagg
    22501 cgctgcacga ttgtgaactt tttccaaaat caaattaata tctttttctg ttaaaggggt
    22561 tggctttttg gattctccaa taaaacgacc aacctttgga agagattgaa tgcgatgcca
    22621 aagctctgta tttaaatcaa gaagtgcaaa aacgtatcct gaatacaaac ttctttcgct
    22681 aatcttctcc tttccattct taaattcaat aacatcttca gttggaacaa caatttcttt
    22741 aagttgttct tcaattccgt tatcttttac taaattttca atggctcttt taactgccat
    22801 ttcactgcca gcataagttt gaattgcata ccatttatga gtactcattt actctcctta
    22861 tacgatcgca gaaacaatag aggacataag ccaatccact aacgccaaaa acaaagaaat
    22921 caccgcaaca accacaaaaa ctgtaatata ggcatttctt acctgttctt ttaaaggaaa
    22981 aattactttc cttaattcgg cttttgataa tttaaaataa gttattaatt tttccattta
    23041 tttaaacctt aattatggca gggcaagagg gattcgaacc cccaaccatc ggatttggaa
    23101 tccggcgctc taccgttgga gctattgccc taagggcgca agcttaactt tttagcttaa
    23161 cttctttgtg aagtgtatgt ttttttaatc ttgggcaata tttttttaat tctaattttt
    23221 cagtagtatt tttactattt ttataggtgc tataattaat atcaccacat tcttcacact
    23281 ttaaaccaac tttaattctc atttcaattt tccttaaaaa attaaagcca agcttttaac
    23341 ttggctttat taaattattt aataatttta gaaacaacac ctgaaccaac agttttacca
    23401 ccttcacgaa tagcaaaacg agttccttct tcaagtgcta ctggagcgat caagcttaca
    23461 gtaattctca cattttcacc tggcataacc atttcaacac catcagctaa tttaatcgaa
    23521 cctgtaacat cagttgttct tacataaaac tgtggtctat agttgttaaa gaatggagta
    23581 tgtctaccac cttcatcttt atttaagata taaacttcag cttcgaagtc agtgtgtgga
    23641 gtaattgatt ttggtttagc aagaaccata ccacggataa cttcttcctt tttagtacca
    23701 cgaagaagaa cacctacgtt atctcctgct tcgccttgat ccatttcttt tctgaacatt
    23761 tcaacacctg ttacagttgt tgtttgagta tctttaatac caacgatttc gatagtatca
    23821 cctactttta caacaccttt ttcaattcta cctgtaacaa cagtaccacg acctgaaatt
    23881 gagaaaacgt cttctattgg cattaagaag tctttttcag tatcacgagt tggagttgga
    23941 atatagctat caactgcagc cataagatcc ataatttttg ctgaccattc accatcttgt
    24001 ccagctttag cttcttcaag agcttttaaa gcagaaccag aaataatagg tgtatcatcg
    24061 cctgggaaat cataagagct taataattct ctaatttcca tttcaactaa ctctagaagt
    24121 tcagcatcat caaccatatc tgctttattc ataaaaacaa caatatatgg aacgcctact
    24181 tgacgagaaa gaagaatgtg ttctctagtt tgtggcatag gaccatctgc agcagaaaca
    24241 accaagatcg ctccatccat ttgtgcagca cctgtaatca tgtttttaac ataatctgcg
    24301 tgacctgggc agtcaacgtg tgcatagtga cgattgtctg tttcatattc aatatgagaa
    24361 gtagcaatag taataccacg ctctttttct tctggagcat tatcgatatt atcataatct
    24421 ttaagctctg ctaaacctct tctagaaaga acagcagaaa tagcagctgt taaagtagtt
    24481 ttaccatggt caacgtgacc aatagtacca atatttacgt gtggcttatt acgtgaaaat
    24541 ttttctttag ccattttttt cctccgtata aaaaataaat tgagcaaagc aagtcttata
    24601 tctatataat tttttcaatt catggagctc atagcgggaa ttgaacccgc gacctctccc
    24661 ttaccaaggg agtgctctac ctctgagcca tacgagcgct cagaaaaatt atacataata
    24721 atagacaaca aaaactctta aatgggatat atactgtaag ttaaaggttt taaaatacag
    24781 ctcccagttc ttttaaattg ttggagcggg aaacgggact cgaacccgcg accctcagct
    24841 tggaaggctg atgctctagc caactgagct actcccgcaa agcatggtgg tgagtcgtgg
    24901 attcgaacca cggaaggcga aagccagcag atttacagtc tgccctcgtt ggccacttga
    24961 gtaactcacc ataaaaatat tgctttttca atattctggt caaacactgc taaaataaat
    25021 ggagctggtt aagggacttg aacccccgac ctgctgctta caaggcagct gctctaccaa
    25081 ctgagctaaa ccagcaaaaa taaaagtgag attataactc aaaaaaaaat ttttgtcaag
    25141 acttttttag tttttctata aaattttagt cttgtaaagt ttattatcat aaaccgatat
    25201 tatttttatc tatttatgat aatcaaacaa atttaaaaat ttctttgctc tttcgctttt
    25261 tggattttca aaaaaacttt taggatcatt ttcttcgatg atttttcctt catccataaa
    25321 aataatttta tctgctacag ctttagcaaa acccatttca tgagtaacaa taagcatagt
    25381 cataccctct tttgcaagat ttagcattac ctctaaaact tctctaacaa tctcaggatc
    25441 caacgctgct gtaacctcat caaaaagcat taactcagga ttcatacata gacttcttac
    25501 tatggcaatt ctttgctttt gtcctccgct aagttctctt ggataagcat gaattttatg
    25561 caaaagcccc accttttcaa gccaaatttt agcctctttt aaaacctcat ctttctttct
    25621 tttttgcact ttcataggcc ctaaaagtat attttcttca acacttaaat gctcaaaaag
    25681 ctcataagat tgaaaaacca taccaacttt ttgacgcatt cttggccatt ctttaaaatc
    25741 tttatctatt ttctcattat caatataaat attaccactt gcaatctctt caagcccatt
    25801 aatacaacgc aaaagcgtag attttccaca tccgctagga cctaaaatca ccacaacttc
    25861 tttagcctta acttctaaat taatatcttt taaggcgtga tgcgaaccat aatacttttg
    25921 taaattttct atttttagta tgctcatttt agctccattt tttctctaat tttcttgaat
    25981 ataaagtgat aggataacaa agtataaaaa agataaaaaa aatcaaacca taaataataa
    26041 aaggtgcaaa atcatttcta ttatgaaatt ctataatttg ttgccctact tttacaagct
    26101 ctaccgcgcc gattaaataa gcaaaggttg tacttttaat catacgagta agtaaattca
    26161 tgctcatagg agttaaacga cgcatagctt gtggaataat aatataaaca aaactttgca
    26221 ccgtatttaa acctaaagat gatgcacttt catactgatg ttttggaata ctctgcaagg
    26281 aaacacgcac caaatccatc atctcaaaac aaccccaaat gctaaaaaca ataatagctg
    26341 cacttacaga actcaaatcc cacccaaacc atctaggaaa accaaaatac accacaaaaa
    26401 gccatactaa aagtggcata acacgcacaa attctaaacc caaacgacaa aaagcataga
    26461 tataggtatt tttaaaactc attaaaattc ctaaaaataa cccacctatc gaagtaataa
    26521 taatgctgat aaatgaaatt tcaagagtga caaaaagccc ttgccagagt cttaaaagcg
    26581 tatcggtatt taaaagttca agcatgaagc aacctttttt caaactttag caaaataaaa
    26641 gacaaaggta agataataca caaatatccc ataaacaaca aaaacaatag ctcatctgtc
    26701 ttataggtta aggaatttaa actcttcatt aaattcacca aatctggcaa ggcaataata
    26761 ctaacgactg aagtttcttt gattaaaaat ataatattag cactaatact tggcatagaa
    26821 atagccaaag cttgcggcaa aatcacataa cgcaaatttc caaattttga aaaacccaaa
    26881 gaaagtcccg cttcaaactg ctgttttctt atggcttcaa atcccgctct taaactttca
    26941 gccatataag aacctcctaa aaaactaagt cctactatag cacaagcaaa agaaggcctt
    27001 aaagtttctt ctacgcttaa gcaaatcaaa tcaagcggtg gaatttgctc taaatgtata
    27061 ttaaatttag gtaaagcata atataagaaa aaaagttgaa ttaataaagg cgtatttctt
    27121 gaaaactcta tataaagctt gcaaatattt tctaaaattt ttattttaaa ataactcatt
    27181 aaaatgcaaa acaagcctat tatcaaagaa aaaataattc caaaaaagct tagttttatc
    27241 gtaagccaag cagccgttaa aaaagcagga gcttgaacta atataaaatc aaaatccatt
    27301 ctctacctta aatttttacc aaagttcttt catgatcata tctttattta aaatttcaat
    27361 tctacctttt tttgtatcaa taagttctga aattttaagt tcttttaaca ctcgagataa
    27421 agattgtgct ctaacattta aatcaattgc aatttgtttt tgtgaaattg tatctaaatt
    27481 tttttcattt tccaaaagat actttaataa tctcgtcctt aaatctaatg cattttgaga
    27541 taatttcttt tctaaaattt taattttatc aaaaagtgaa ctgataagta aaaaattgaa
    27601 ttctttattt tcactgcata aattttgaaa attaataaaa tcaatttcca aaatttctcc
    27661 atcttcctca aatatagcat tagcaggata atttaatttt ttaaaagcag gcatttctgc
    27721 tataaaattt ggaggattaa aataatgcaa agtaatttct ttatcacttg ctgtactttt
    27781 ataaatgcgt atttttccct tgagtaaaat aaaaaatttt ttagcctctt cgccctcata
    27841 aaataaaata ctattttttt gaattttttt taattttcct acactagata aaagttctaa
    27901 ataatctttc attatataca ttttccattc ttaacttatg ttaaatttaa tttatcttat
    27961 ttttgctata ttaacgccat aaaattaaca tttaagaaag gcttatatga aatttgaaac
    28021 aattaatcaa gaaagcatag caaaactcat ggaaatattt tatgaaaaag ttagaaaaga
    28081 taaggatttg ggccctattt ttaacaatgc tattggaaca agtgatgaag aatggaaaga
    28141 acataaagca aaaataggaa atttttgggc aggcatgctt ttaggagaag gtgattataa
    28201 tgggcaaccc ttaaaaaagc atctagattt acctcctttt cctcaagaat tttttgaagt
    28261 ttggctagga ctttttgaag aaagtttaaa tatggtttat aatgaagaaa tgaaagcagt
    28321 tattttacag cgtgcacaaa tgatagcttc acattttcaa aatatgcttt ataaatatgg
    28381 tggacattaa tttggcaatt tttttgccaa atcttttttc accttttcta aaatctcctc
    28441 atccttggaa aaatcaaaaa atttaaactc atttccatgt tgcataaaac catcgagcaa
    28501 atctccactc aaacgatttt taagatcaag ctctgctatt ttaaacccat ctaaagtgct
    28561 agcaaattct tttaaacgac tcggaatttc tttaagttta gtataaagat agcaagtact
    28621 tttaagccct acacgaccta cacggccacg aagttgatgt aaggtagcaa gtcctaaacg
    28681 ttccgccccc acaatcacta tcatactcaa tcttggcaaa gaaataccta cttccaccac
    28741 tgtagtgctt agtaaaatat ttccctcatc tctaaaacgc tctaaaattt catctttttg
    28801 tttatctttt ccatgagtta caaaaacttt ttcataatga ctctgccaat attctttggc
    28861 ctgctctaaa gaaagataag gaatattatc actagcactc actaagggat aaataatgat
    28921 aatttgatga tttttagaaa tttcttcctt gatcttctcg ctaagcttag aaaaaccttc
    28981 attttgtatg caataagttg taatatcttt tttaaaaggc atttgtttaa taaagctaaa
    29041 atttaaaagt tcagattgta tcatgcttaa agttcttgga ataggcgtag ctgaaaactg
    29101 tataaaatga ggggcaaatt cttgcttatt taaagaatga attttttcac gctgagctga
    29161 tccaaaacga tgttgttcat ctatcattac aagcacggca ttatgacttt ctaaatgaat
    29221 taaagcatga gtgcctatga taagatttgc tttttggata ttttgttcta aatctttttc
    29281 ttttttaccc cctttaataa acaaaatatt cataaaatca ggtaaaaatt tcttagcctc
    29341 ttcataaagc tgatacgcta aaatactagt aggtgccatt aaaatagctt gcttaggata
    29401 aaccatcaaa gccgcaccga gtaaaaccaa ggttttacca caccccacat cacccataat
    29461 cacacgcctt ttggcttctt ttgagtgtaa atctttttct atgtctttta aggcgttaag
    29521 ctgatcttta gtaagagaaa aaggcaaatc tttaagccaa ttagctatat taaaaacatt
    29581 gatttgatga gctttaaaat gcgtttgttt agcttttaaa cgctttaaaa aattatatat
    29641 ttctatatat tttaaatctt tgctaaaatt ttgcaaattt tcaaacataa aaaaactttt
    29701 ttcatcataa gcatgtaaat ttaaaagaaa atgtatatat ttatcctcta tgccactttc
    29761 ttttaaattt tcataattaa gatatttatg tataaaagcg gcaatttttg tatcttttaa
    29821 acctaaaatt tgatactttg gactaaaacc ctcaaaagaa gttaaaattt taggattgtt
    29881 aaattgccaa gtgtgattaa aacgcgagag tttagcatta aaaataagct cttttcctac
    29941 cttgcaaacc ccaaaatgcc aagctctagg atgaaaaaat acaaaagaaa tattttcttg
    30001 ccattcttca caaaaaccta aaccaaaaag ttgatttttt cttgaactaa cgctttttat
    30061 agtgattttt tgggtgcaaa tttcattttc tttgggattt ttacttggat ttaaattttc
    30121 aattttttta ggtaaaagaa gcgctaaatc aatagcactt ctaattttta attttttaaa
    30181 aaattcaaaa tcactttctt taattttcat tttgtatgct tgcaaaactt atatttaaaa
    30241 gttcttgatg ttttttaata taagcattta tggtttcaag cttaaccttt tccataagtt
    30301 ttaattcttc tttatagtat cccaaattta aaccttgata aaattcatta aaggctatag
    30361 ataaacgctt acttaagctt tcataacgca aaggagttga tcctatgaga aaatttttag
    30421 cttgatcaag ttcgttttga gtcatgccat tttttataaa atcttcaaag agctctttta
    30481 cgattttctt agcttcttta gcgctttcat ttttagtttg taaatatcca aaaactctag
    30541 aaaaagacat attcatatca agcatagcat aagctgagta tgcaagacct cttttaacgc
    30601 gaatttcttc cataatcctt gaaccaaatc ctccttgccc tagaacaaat aaagcaattt
    30661 ttgcaagata taaatcctta tctttaaaat cagcaaaaaa aggcgtagca aaataaatat
    30721 aagcttgttc actttctggg cgtaccaaaa tttcatcttt gatgtttttg cttaactcat
    30781 atttttttgg agtatttttt ttacctattt gaagttttga taagagtttt aaaagatctt
    30841 ccttggcttg tttttcttct aaatctcctc ctaaaatcac aaccaaatca ctaagatgga
    30901 taaaattttt ataaaaattt tgcaaatctt ttaaagacaa agtttctata cttttttcat
    30961 ctccatcatt tggactttga aattctttac atttaaaaat ttgagcattg agtaaatttt
    31021 ttgctaaata atcaaaatta ctatttttac tcgcgagctc acctaaggca ttgattttta
    31081 atttttgcaa agttttttct tctattcttg gttttaaaag caatttttct aaactcttta
    31141 aagcaaaatc aaaattttct ttcaagcaag aaagattgat ttccaaactt tcaaaaccac
    31201 tacttgcctc taaatttatc gctctaaatt ctaaatcctt aaaaaattta tcatccacgc
    31261 cttcatttaa aatgcgtgaa aacattttag ccaaacctgc tatttcatca taacttctag
    31321 cgcaatttct aaaaacaagc tttaaaacaa caataggaaa atcagaattt ttttcaaaaa
    31381 taaaagggat tttaacaccc ctactctcta aatactgcat taaaaccttt ctaaaatttc
    31441 ataagcggta ttgcgtttag ctggattttc gcctaaactt ctaatcagcc ttatcatctc
    31501 atcttgattc attctataac ttgctcctgc agcacttact acattttctt ccatcatggt
    31561 tgagcctaaa tcattagccc caaattttaa agcaagttga cctataagcg agccttgagt
    31621 tacccaagaa ctttgtaaat ttttaaaatt atctaaataa agtcttgcta aagctaaaag
    31681 tcttaaatac ttgttagaac tttgtttcat aatctctgga tgtttttgga ttaaagcagt
    31741 attatcactt tgaaaactcc ataaaataaa agctctaaaa ccacctgttt catcttgtaa
    31801 ttttcttaaa tgttcaaaat gatcgatgat ttcttcatca ttttcaaccg ttccaaacat
    31861 catagtagct gtacttttca taccgatttt atgagcttgg cgatgtactt ctaaccaagt
    31921 agctgtatca catttattgg gtgcaatgat atcacgcacc ctatcgctta gcacctcagc
    31981 acctgctcct ggtatagaaa ataaaccctt agcttgtaat ctttgaagca cttcagtaat
    32041 tgaaatttta gatgcttttg caatataagc gatttcaacc gctgaaaaac catgtacagt
    32101 gatatttgga taatgttctt ttatccaaga aactaattct tcataccatt ctatttttaa
    32161 ttttggatgc accccgcctt gaaaaagaat ttgtgtaccc ccaatagctt caagctcctc
    32221 tatcttttta tctatttctt caaaacttaa aatataagca tcatcttctt tatgatgacg
    32281 ataaaaagca caaaaagaac aatcaataca acaaacatta gtatagttaa tatttctatc
    32341 tacaacaaaa gtagtgattt tttcaggatg aagttctaat tttcttctat aagccatttc
    32401 tccaagctct gttaaacttg catgatgtaa taaatctaaa gcttcttttt tatccagtct
    32461 tttcaaaatt tttccttgtt ttttgcataa attaaaataa ttatagcatt taaaatataa
    32521 attatgctat agtttcgctt atgaattaca ttgaactatt aaaaaataat aaaaatatca
    32581 gaatattagc ttcggttcag tttatagtat attttggagc atggttttct caaacaggag
    32641 tttttaccct tttggttgag cttaatgctc ctacttgggc aacagctaca agtgctatgc
    32701 ttgctttttt acctggagtt ttgcttgctc ctattaatgg cgtcatagta gagaaaaata
    32761 aacctaaaaa acttttactc aatatgatta gtatagaatt aatttctatt ttttgtctta
    32821 tttttgtcac aagtcttagt atgctttggc ttttatttat tttaattttc ataagacttt
    32881 gtgttgcttc gatttatttt caagctgaaa tgagtttatt ggcgaaaatt ttaacccctc
    32941 aagaacttaa actcgctaat gaaatgcaca gtgtcatttg ggcgatttct tatacagcag
    33001 gtatggcaag tgcgggaatt tttatttatt ttctaggagt taaaaccgct tttttatttg
    33061 actgcatgct tatactcata ggcatttctt ttttagtaag attaagcatt cctgattttc
    33121 atcaaaaaac acaaagtcgc ttttttatca tgataaaaga aggatttttc tatgttttaa
    33181 ataataaaat aatttttcat cttatcttgc ttcacgcttt tataggttta actgcttatg
    33241 aaaccttagt tacgctttta gcgcaacatc aatataaaga agttttatct gctgctttag
    33301 taatagggtt tttaaatgcg gtacgtgctt gttctttggc tataggacct atggttttaa
    33361 gcaaatttat caatgataaa aatttatttt acatgtatct tggtcaaggt tttggtatta
    33421 tactttgggc tttaactcaa tttaattttt atatttcttt tttaggatta attggtgcag
    33481 gtttttttac ctcagcgctt tgggcttata cctacactat gatacaaaaa aatgccgaca
    33541 aagaatatca tggtagggtg atcgcttata cagatatgat ttatcttagt tttagtgcta
    33601 ttatttcaat gcttatgggc tttttgtttg aaatagacct gagtttagaa ctgattacag
    33661 gcttattggg tatgattttt atctttgcgg cattttattg gaagtggttt tataaaaaat
    33721 atttgtgaaa attcacaaat attttaaatt ttaaataaat cttgaagatt tttcattgct
    33781 tcttcattac tgatggcatt atttagctgc gatgagctta attcattgag ctctatttca
    33841 taaccactta acatagaagc aaggcgaata ttaataccat tttttcctat agctttgctt
    33901 ttttgttcgc tatttaaact tacaatagct tttttatctt caatttttac agaatttaca
    33961 atagcaggag ccaaggcacg agaaattaaa atttcactct catttgtaaa ttctatacaa
    34021 tcaatatttt cattatgaag ctctttgctt actgcattaa ttcttacacc tttaacacct
    34081 actgtagcac ctacaggatc gatatttgct ccattggcct gaagaatgat ttttgctctt
    34141 tcacctggaa ttctagcaca tcctataata ttgacataac catctttgat ttctggaacc
    34201 tcagcttcaa gtaaacattc taaaaattta ggacttgtac gactaagctc gattttaata
    34261 cccttatctg tataaacacg gcgtatcaca gcttttgcca catcacctat tttaaacttt
    34321 tcccctttaa tgcgattttt tctcggtaaa aaagctctta attcatctat ttcaataaaa
    34381 gtattttctt cattatccac tctaacaact gtaccaaaaa ccatttgccc tactttgttt
    34441 ttatattttt caaaaatagt ttgttctaat aatttttgta tatgatattc aagttcttta
    34501 tgcaaggtat ttaccgcagt tcttcctaaa ttttccaaag aacattcata ggttaattca
    34561 tctcctattt caacatctgg agcttctgat tttgccttac ttaacgcgat aaaactctca
    34621 cttttatttt gcaatctctc gtcattatct gctactatgg taattttttg ataaagattt
    34681 aaatttttag gatccacaaa aaactcatat tcttgtccat aaattctttt tgcagtattg
    34741 attaaagcgg tagctacctt ttctcttaca ttctctaagt ttaaattttt ttcattagca
    34801 atagattcga taatatctgc tatcttttcc atattttata aaaccttttt tgtgggaaat
    34861 ttaaaaatgt agataaaaat tatatcctta ataagtttaa ttaaaagtaa aatttgctaa
    34921 aattatagat taaaatgaaa attcttaagg atttagctat ggaattaaaa ttggcaagaa
    34981 ctttgattaa tgaaaaacct aaaaatatta gcctagaaaa aatcgaagag gctatagaaa
    35041 aagaaggaca aaagtttttt tattttgata aagataatac acacaaacaa ctcattgccc
    35101 ttgtaaatca ttttgaaaaa aaaggagtaa gcatttatca tagaaccgta aaatacggac
    35161 ttgatgataa tgattttatg tatgaggtac atattctttg agtgctaaaa aactttttat
    35221 ccaaacttta ggttgtgcga tgaatgtcag agattctgag catatgatcg cagaattaac
    35281 acaaaaagaa aattacgcac taacagaaga tatcaaagaa gcagatctta ttcttatcaa
    35341 tacctgttca gtgcgtgaaa aacctgtgca taaacttttc tcagaagtgg gtggctttga
    35401 aaaagttaaa aaagaaggtg ctaaaatagg agtttgtgga tgcactgcat cacatttggg
    35461 aaatgaaatt ttcaaacgtg ctccttatgt ggattttgtt ctaggggcaa gaaatatttc
    35521 caaaatcact caagctataa aaactccaaa atttatgggg gtggacatag actatgatga
    35581 aagtgaattt gcttttgcag attttagaaa tagtatttat aaatcctata ttaatatctc
    35641 cataggttgt gataaacact gcacttattg tatagtgcca catactagag gagatgaaat
    35701 ttccatacct tttaacatca tctacaaaga agctcaaaaa gccgttgaaa aaggcgctaa
    35761 agagattttc ttgctaggac aaaatgtcaa taactacggc aaaagattta gaaacgaaca
    35821 taaaaaaatg gacttttcag atcttttaga agaacttagc actatagaag gtttggaacg
    35881 cattcgcttt acaagtccac atcctttgca catggatgat aaatttttag aagtttttgc
    35941 caataatcca aaagtttgca aatccatgca tatgccttta caaagcggtt caagtgaaat
    36001 tttaaaagcc atgaaacgtg gctatactaa agaatggtat ttaaatagag ctttaaaact
    36061 tagagaactt tgtccaaatg ttagcatttc tacagacatt attgtagctt ttccagggga
    36121 aagtgaaaaa gattttgaag aaactatgga tgttttggaa aaagtgcgtt ttgaacaaat
    36181 tttttctttt aaatactcca aacgcccttt aacaaaagcc gcaaccatgc ctaatcaaat
    36241 cgatgaagaa acagcttcaa gaagacttag caccttacaa aatcgtcata gtgaaatttt
    36301 agatgaaatt gtaaaaaaac aagaaaataa aacttttaaa gttttatttg aagaattaag
    36361 agcaggcaat agcattgctg gaagaacaga taataatttt ttagttcaag ttgaaggtag
    36421 cgaagaactt ttagggcaat ttaaagaagt aaaaatcact aatgcaaagc gtatggtttt
    36481 atatggggaa atcgtttaaa atccattgct taacatatat aattttcatc ttgcaatggc
    36541 ttattttttt aagctgtaaa aagcactata aaggtgaaaa agttgaccgt aaagctagtg
    36601 tgatactttt ttggcatgga aaattagcac tcatgccttt tgcgtttaga cattatagac
    36661 aaaaaaataa aaaagcctat gtcatgatct cccaccataa agatggagaa caaattgcaa
    36721 aaatcatcaa gcttttcggt cttgatactg taagaggaag cacttcaagg ggtgctagca
    36781 gtgcacttag agctgcattt aaagttttag aacaaaatga cgatatagtt atcacgcctg
    36841 atggtccacg tgggccttat catagtattt cagatggttc tatcattttg gctcaaaaaa
    36901 aagaactaaa gataagaatt ttaaactatg aagcaaatcg tttttgggaa tttaaaagtt
    36961 gggataagat gatcttgcca aaacctttta gtaagattac ttatagtcta agtgaacctt
    37021 tggatatttt atctttagat aaagaaaaag ctaaagaatt tctaatggaa caatttgata
    37081 aaattaactt agctgatcaa tttaaggaat gaaatgttat ttttacttaa aaaaatattt
    37141 ccacaacttt ttattagtat tattttagaa gataaaaaaa atattgtaaa agcttctatt
    37201 tacagaggaa ataaactaat cagtagcaat gaaaaaactt ttgataaaag tgaaaattta
    37261 ttagaataca taaaaaattt aagcaagcat ttcttatttt accacactgc tttattttta
    37321 gacgccaaag aacaaggatt aatacctagt acaaatattc aagattgtga gcactttaat
    37381 ataggaaaaa tcagcttaca gcatatttta tttaataatg cccttgttta tacggctacc
    37441 gaacatgtgg aatattatag cgagcttttt gaagaatata gaggtttaga ttttttatat
    37501 tccccttttg cccttcttta ctacaatata caaaaagaaa aacagcctga tgatcaaatt
    37561 ttactttatg gatttaaaca aggacatctt ttggcaatta ttgttgctaa aggcaatact
    37621 attttatacg gtgattttaa aatatttgag caagaattag gtttagagct tgaacttcca
    37681 tcagaagata atcaagaaat tgaaaacaac aacgatgata ctgaagttac cttagataac
    37741 ttcaatgaag ccttaaataa taaatttgat ctacttgatc aagaaaataa tcttgaaact
    37801 ttggataata atgataattt taatcttgat gaattaaatc aatttagcaa tgatatggaa
    37861 ctttgccgtt atattattac gagcattgaa aaattttaca atgatgataa atatgctggg
    37921 gtatttatca atggtatttt attatatagc gaatcagata ttaacataag tgctattgat
    37981 tttttagaaa gtgaaacttt tttagagata aaaacgaaac aaatcaacac cttagatctt
    38041 atgatagaat tgatgcaaaa ggagcttaaa tgacttatag cttcatacag ccaagaaaaa
    38101 aacctatttt cacactcttt gataaaattt ggctaggact ttttggtttt agtatattat
    38161 ttatcttgct agtatatttt acatatacaa taaaaattgc attaatcaat agctctatcg
    38221 atgatgaaaa acaacaagtt atagtgcttc aaaatcaaac taagcaaaat gaaatgcttt
    38281 atgaaatttt atttgatcaa agccaaatag cgaaaaattt taacactcaa aatcaaattg
    38341 ttaaagaaag cttaagaaat ctatttgata ttattgtaaa aactgataat attactcttg
    38401 aaagtgttga acaagacgaa tattccttaa aacttatcgg agtcactcct acaagagaaa
    38461 tgtttactct acttttagaa acccctttaa aaagcatctt tgatcaaagc tatacaacct
    38521 attatcgctt agataatggg tggtatcgtt ttgttagtat tagtaaacaa attccaggag
    38581 ttgcagatga aagataaaag tctagaagaa attgatttat taaagcttat catttgcgcg
    38641 ttaagtttta taagcgtttg cacagccttg atcttatttt tacttttacc gacattaaaa
    38701 aactacaaac aagcaaatct tagagaaaac tcacaacttg ctatcttaaa agccgctaaa
    38761 tcaaaatttg actttagtga agataaaata tcaactctaa gaagcgaaaa caacaaaagt
    38821 ttagagcaat ttgagcaaaa ttttaatata ggaaattttg atattttttt acaaaaatat
    38881 tttcaaaatg taaaaattca agaaactaag cccaaaaaac aagaaaaata tctaaaaaac
    38941 cgcttagcca ttaaagcgac aatgaacaat cctagaagac tttatgattt tattgatgct
    39001 ctaaaaaact ataataattt aatcaagctt gattatccac ttaatcttaa agcaggagag
    39061 caaggtatct ctatagatct tactctcaaa gtttattcaa gctaaactca catcttcgcc
    39121 ttttaaaatt tgattcatag tattcattgc acacattttt ccacacatgg aacatgagtt
    39181 taaatcatca gggcgacgct cattaaacat ttttttagcc ttttctccat caatagcaag
    39241 tttaaacatt ttctcccaat ctatctcttg tctagcctta ctcatctcat catctcttgc
    39301 tctttctttt ggaagtttag ctatatctcc cgcatgagct gcaattttag tcgcaactat
    39361 accctctcta acatcttcta aatttggaag tcttaagtgt tcagcaggtg ttacataaca
    39421 cagcatatca gcaccgctag ctgcagccac agctcctcca atagcaccac taatatgatc
    39481 atacgctgca ccaatatctg ttaccaaagg tcctaagaca taaaaaggcg ctcctttgca
    39541 taaacgcttt tctaattgca tatttacctc tatttcatta atagccatat gccctggacc
    39601 ttctatcatt acttgaaccc caacatccca agccctttgg gtaagaagcg ataattctat
    39661 aagctctgaa atttgcgccc catcacttgc atcgtgagta gagccaggac gcaaagcatc
    39721 gcccaaagat aaagttacat cgtattttaa acaaatgtca agcaaatcat cataatactc
    39781 aaaaaaagga ttttcagcat ctttcatcat catccaagca taaagcacag agcctcctct
    39841 tgaaactata tttgtaagtc ttttactttg tttaaaaata tgcgctgcgc gagaattaat
    39901 acctgcatga attgtcataa aatcaacccc acttttagca tgatgatata caacatctaa
    39961 aaagtcttta gcaccaattt gttttaaatc tttttctaaa aatcctaccg catcatatac
    40021 aggaactgtt cctatcatag cttttgaaac attaacaagc tcgtctctaa aacgacttgt
    40081 tttgccataa ttgcttaagt ccataatcgc ttctatatca aatttatgag cgagctctac
    40141 ttttttcatt tcctcgctat aatcaacgca atcatttgaa actcctaaat ttacattaac
    40201 cttagtacgc agtccaaaac ctataccatt tggatcaaga cttttatgat taatatttgc
    40261 agggataata attttaccgc aagcaatatt ttcaagcaaa aaatctttac ttaaattttc
    40321 tttttgtgca acaatctgca tttctttagt aaaaacacct tctttggcat aattcatttg
    40381 agttttcata aatttatcct ttaaaaaatt tggataaatg aagggtgagt ataaattttt
    40441 aaagtattga aatttataaa tcttcccgac gctggcatta tccagatccg gttcggtcta
    40501 agcttttagc ttactctcag cctgttacac aagctcccgt catttatgtt ttaattatac
    40561 actttaaata tttatttttg ctttatgcgt gcagtttttg taaaatttat aagttcttct
    40621 gtagttttta tatgataagg aagttttcca aggcaatatt taaaaatttc agcagctgcc
    40681 aaagcatcat ctaaagccct atgatgcgta ttttccacgc ccagaaattc tttcaaaacc
    40741 tctagtttat attttggact ttctatacaa cattgtgcaa attctatagt gcaaatacga
    40801 cgattaagca aaatgccaaa accacactca tttaaagcct tagaaataaa actataatca
    40861 aaacgcacat tatgcgctac aaaaatactg tcttttaaaa aaagcctaaa atcacttaaa
    40921 acctttgcta aacttggagc attttccacc atctcataag taatacccgt aagttcggtt
    40981 atattttctg gaatttcttt tactttaaca aaactttgaa agcgtccaat ttctttagaa
    41041 ttttgaattt ttactgctcc aatttctaaa atttccccct tacttacgcc gccagtactt
    41101 tctatatcta ctatacaaaa aatttcatct ttaatttttg ttgtgcgtgt tttaagggta
    41161 aaaatattat ctttattcaa agttaagccc aaacccaaaa gctcaaaagt ttccaaatct
    41221 aaatcaaaat tttttaattc ttcaactttg gcaaactctt gcatcaccca atcataaggc
    41281 ttgctttgct tatttaatat agaaataatc tgatcaattt gctgtgaact caaaattcaa
    41341 gctttaaaga tgaaattgca gttttataat cattagaaga aaaaatataa cttccagcca
    41401 ccaaaatatc agctccggat tcctctaaat cgctagcatt taaaccatta acaccaccat
    41461 caacctctat aaaaacttta gcattttttt tatcaatcat ttggcgcaat tctttgattt
    41521 tttcatgtac caaaggtaaa aatttttgtc caccaaatcc aggattaaca ctcattaaaa
    41581 gtaccatatc tacaaattct agcatgtgtt taatagaatc aataggagtg tgcggattta
    41641 aaacaatagc aggatggatt ccttgacttc ttatatattc acaaagtctt ataggatgaa
    41701 cttcgctttc catatgaaaa gaaatgaatt ttggtttcaa agggataaaa agatctataa
    41761 atttacttac atctttaacc atcaaatgca catctaatgg caacttacta atagttgaaa
    41821 ttttttcgat cacgcaaggt ccaaaagtca aatttggaac aaagtgtcca tccattacat
    41881 caatatgtaa aagatctgca cctgcagctt caatagcttt aacttcttct tctaatttca
    41941 aaaaatttgc agacaataaa cttggagcta catacatgat caaaacctta aagtatatat
    42001 aaatgtgata aataatattt tatcgactta tatattaaaa aaactataaa ttatggaata
    42061 ttttaagctt aattttgata aaatctccat ttaaaaattt tcataaggac aagaaaatgg
    42121 caagagtatg tcaaatcaca ggcaagggtc caatggtggg taataatgtc agccatgcta
    42181 acaataaaac aaaaagacgc tttttaccta atctcagaac agttcgtgta actttagaag
    42241 atggcaccac gagaaaaatg agaatcgcag cttctactct aagaactcta aaaaaacaaa
    42301 attctaaata attttgagga tttattcctc aattttaaaa tttccaattt aaaaataaac
    42361 tttaataaat cacttatata acacacattt aaaaattatt attaatttta ttatttttta
    42421 agccaaaaat atcttttaat agtgtaaaat accttgttaa atgaatttta aatttcacta
    42481 atacaaggag agtttatgct acatgaatat agagaattaa tgtcagagct aaaaggtaaa
    42541 gatgctcatt ttgataaact atttgatcgt cataatgaac ttgatgacat gattaaagat
    42601 gcagaagaag gtagaacttc tcttagcagc atggaaattt caactttaaa aaaagaaaag
    42661 cttcatgtaa aagatgaact tagccaatat ctagcaaatt ataaaaaata aggcaaaaca
    42721 atgtttggaa gtaaaataaa ccattctgat cttcaaaaac ttgaagaaga aaataaaaat
    42781 cttgcacata aaattgaaaa atttcaatcg gaaaatttag aattaaaaaa taaaattaca
    42841 tcattagaac aagcggcttt agagtctaaa cttaaaacag atcttttaaa tgttttatta
    42901 actggggttt taaaaaatat tactattgtt caaggcgata tgttagaaaa tgtaaataag
    42961 gcagaagtta tctctagcta ttctaaaact tctcttgctg aaatggatga acttaaccat
    43021 attgctaatt ctatcaatgc ttccttaggg gatattacag aatcagccaa taaaacaaga
    43081 gatgttgcag gaacattgca tagaagtgta gatgaaatta ctaatgtaat taatctaatt
    43141 aaagatgttt ccgatcaaac caatctttta gctcttaacg ctgccataga agctgcacgc
    43201 gcaggtgaac atgggcgtgg ttttgctgtt gttgccgatg aagtaagaaa actagctgaa
    43261 aaaacacaaa aagcaaccac agaagttgaa atgaatatca accttctaaa gcaaaatgca
    43321 aatgaaatgt atactcaaag tgagcaagtt gaaaaaattt ctatagattc taatgctcat
    43381 attatgagtt tttccgaaaa atttacccac ttagtaaatg aagcgcattc tactaattca
    43441 aatgcagttg gtatcgcttc agaagctttc gtatctttag caaaactaga tcatatagct
    43501 tttaaattaa atggttataa agaaattttt tccaaatcag gaaagcaatt agccgatcat
    43561 acatcttgtc gcttaggaaa atggcttgct agcacaggaa aagaaagatt tgggcaaaat
    43621 aaaagcttct taaaaattaa cgagccacat gaaaaagttc atgaaaatat gaataatgct
    43681 ataacaatag caaatacaga agatattagc aaagatatta ctcaacacag cataattaat
    43741 aaatgcgaag ttgctgaaaa tgcatcgctt gatcttttca atgtatttaa agaaatgctt
    43801 gatgaatcag atcattaaat cctaggttga acctttttaa ggtttaacct aaataatctt
    43861 taatattttt cccacttctc ctttaaaaac cacatataag caaaatcaag caaaggcgtt
    43921 cttattatat ttttacattt tttttcaaaa tcctgcacct taacataaac agcttcaatc
    43981 tcttcatcat caactccacc tcctgaagaa attttatctt tttcatcaac ttctgcgaaa
    44041 taaaagcttt gcttgcttac acctgaacca aaccctgtat aaaaatctcc tattttttct
    44101 aaatttttag gagcatatcc tagttcttct atacattctt cttttgctat ttcctctaaa
    44161 gataattttt tatccacaag cccagaacaa agctctatag tatagcccat attatcatct
    44221 tttacataat ctttatcatg catttgatga taccaaagtg gtatacgaaa ttggcgtaca
    44281 aaaataaaac tttctaattc tttatgatac aaaagcactg aaacactatc tttagattct
    44341 ataaaatccc aagtacaaaa cttaccatta ctttcataag caaatctctt aggcttaata
    44401 taatttgatt tttcaaaaga aagttctttt aaatttttaa acgccataat aaaacctttt
    44461 atttattttt cacattgtac tttatttttg cttttttgaa aatataaagg taattaaagc
    44521 cttaaaaaat taaaaatcat atttataact caaccaaaaa ctccttcctt ctgtatagtc
    44581 ttgataacga tttgcatatc cagcaggatt ggctccagcc catttagtaa cttgcggatc
    44641 aaagaaattt ttatcaaaaa gattttgtac tacaaaactt aagctagatt gcttattgat
    44701 tttataattt atccctaaat ctactatata aaaaggctta tatttttgcc atggcaaact
    44761 accattaccg ccaccttttg ctttggctat agtatcaagt cttgctcgtg tttttatata
    44821 ggagctaaat ttacctcgct catagtttaa ttttaacatt gctatatgcc ttggtaaatt
    44881 ctctattcta tcaccaccaa accaattttt ttgaccatct ttgtagcgat tatccataaa
    44941 agtataactt gaatttaggc taaagccatt gtaagttttg gtattaaatg caaattctat
    45001 acctttagtc tgtgtttttc caagattaat aggacgcgta caaacagtgc cattgctaca
    45061 attaatacca ttttgcatac ctgttaaatc ttcactactg atttgatttg taaaatcagt
    45121 aataaatcct gtgatagaat aatgtgcaaa atcaaatatc ctaaaatcaa cacccaattc
    45181 ataatttata ctttcttctg gttttaagtc agggtttcca aaataagcat tgtcattgct
    45241 ataattataa tatccatttg tcaactcctt agcagcagga gttttatagc cttttgaaac
    45301 acctccttta aaggctatat tatcatttaa gtgataaacc aaataaaccc taggcgtaaa
    45361 ttcagaatca aacaaatcgc tataaatata acgcaaacct gtagtaaaaa tcaaatcatc
    45421 tgttataaaa tactcatttt ccccataaag cgcaaccgtg gtttgatcaa gatttttacc
    45481 tcttatttga ctacctgcgc ttgcttgatc attttttaac atctcataat caatccttgc
    45541 accaaaggta tttactaaat taccgtattg acctaaattc caaggtaaaa caaccttacc
    45601 ttctcctacc caaatttggc tatgcagctc cttatcctta gtgctaccat attgtaaata
    45661 tgagttagtt gaaccaaaat catagttacc atcatgattt aaaacaatat tatccttaaa
    45721 aagttgtctt tcacttttaa tagccctact acttgtagaa ttcactgaaa tttcattaat
    45781 atatcgttct atatcaaaat atatattatt tttatcatct actgtccaat taagcctaga
    45841 accaaaacct aaactagtaa aagcacctgg actatggcta gcaatttgat aattatcagg
    45901 tctttgttga ctattattcc aaaccggtgt aggccatttt aaatcagaag ctgccttatc
    45961 ataatacttc aaccttgcag aaattgataa tgtatcttca atcaaaggag ttgctacata
    46021 agcattaaat cccccagcat tgccatagtg attagagtgc tgttgcaaaa gagtgttaaa
    46081 ttctatattc gcctcagtct tatcaggatt tttcttagtg ataatattta tcacaccgcc
    46141 tacagcatca ctgccataaa gcgtagaagc tggaccacgt ataacctcaa tacgctctat
    46201 catagataaa ggtggaagat aacctgactc actgccacta aagccattat cataaaatcc
    46261 atttgcaaca ctttgacgtt ttccatcaat taaaactaga gtataagaac taccaaaacc
    46321 tcgtatgcta aaatcataag tgcctgtttt attcatagtc acatctacac ctggaatatc
    46381 tcctatagcc tcccctatat ccttaattgg ctttttttca agctcttctt ttgtaatgat
    46441 agaaatacta gcaggcgcat caaccaaatc ttgttcaaaa ccactagcac taaccacaac
    46501 atcattaagt tgatattttt cttctgcttt taacaaagct ccagataaaa ttaaaaaaca
    46561 cagtaaactt tttttaaatt tcatattttt aatttgagtc aaattaattc ctttaaaaat
    46621 aattattttg atatttaaaa tcatttttga agtataaaa
//
LOCUS       DAPWGO010000005        44809 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.005, whole genome shotgun sequence.
ACCESSION   DAPWGO010000005 DAPWGO010000000
VERSION     DAPWGO010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 44809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44809
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.005"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            144..1550
                     /gene="aspA"
                     /locus_tag="RJ336_000219"
     CDS             144..1550
                     /gene="aspA"
                     /locus_tag="RJ336_000219"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HDZ5212694.1"
                     /translation="MGTRKEHDFIGELEISDEVYYGVQTFRAVENFDISHDRLKDFPR
                     FVRALARVKKAAAMANHELGLLDKNIQDAIIKACDKILEGGYYDQFVVDMIQGGAGTS
                     TNMNANEVIANIGLELMGHKKGEYQYLHPNDHVNLSQSTNDAYPTALHLALHDYLSDL
                     AKAMEHLKKAYERKAEEFKDVLKMGRTQLQDAVPMTLGREFKTFAVMIGEDIQRVLEA
                     RKLILEINLGGTAIGTGINSHPDYPKVVERKIREVTGFEYTVAEDLIEATQDTGAYVQ
                     ISGVLKRVATKLSKVCNDLRLLSSGPKCGLNEINLPKMQPGSSIMPGKVNPVIPEVVN
                     QVCYFVIGADVTVTFACEGGQLQLNVFEPVAAYSLFNSIVMLEKAMYTLADKCIDGIT
                     ANEKICSDFVYNSVGIVTALNPYIGYENSASIAKEAMNTGKRVADIALERGLLSKEQI
                     DEILTPSNMLNPHMEAKK"
     gene            1567..2904
                     /locus_tag="RJ336_000220"
     CDS             1567..2904
                     /locus_tag="RJ336_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDZ5212695.1"
                     /translation="MDIMIILQVIVLLGAIFIGIRLGGIAIGYAGGLGVVILGLVLGM
                     KPGNIPWDVILIIAAAIAAISAMQQAGGLDYMVRVTEKILRSSPKFINYLAPACGWLL
                     TILAGTGNAVFSLMPVVVDVAKSQNIKPSVPLSLMVVSSQIGITASPVSAAVVYMSGV
                     LEPLGWNYPTLIGIWISTTFIACMLTAFIVSLITPMDLSKDSVYQERLKAGLVKDAGA
                     ILHGEDKPGAKLSVGIFLITVLAVVLYATAISSNIKWIDPVVVPRDAAIMSFLLTAAT
                     LITWLCKVEPGKILDTSVFKSGMTACVCVFGVAWLGNTFVAGHEASIKEVAGDWVKQT
                     PAMLAVAFFFASMLLYSQAATAKAIVPVIITALGISAANPHDSYMLVACFAAVSALFV
                     LPTYPTLLGAVQMDDTGTTRIGKFIFNHSFFIPGVLAIAIAVALGFVLAPMLI"
     gene            3012..4373
                     /locus_tag="RJ336_000221"
     CDS             3012..4373
                     /locus_tag="RJ336_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG3014 family protein"
                     /protein_id="HDZ5212696.1"
                     /translation="MKIKVGLIFSGIVCLFLTACVNQVKQNTTFENALTQKYCGDDFF
                     NQNLEKIKKNDDVIYTGLNAGLIARNCGDFNKSNVFFDAAEESYKYDVDLENVGSKAA
                     KFVGTTLLNDTIVDYDGSLYERIMVNIYKALNYMEEDDYENARVEFNRALMRQDKAKE
                     YFAKEIEKNRADLDKAKEDKNYDKNMNENSKVIEAQYDNLFKEFDTTKNFINPYATYL
                     ASIFFFMDKDYRKAADLLREVAIIYPKNKTIKKEAKIFKEYATKIKVKKAKKYVFVVY
                     ENGFGVVKDEFALTLPFIVDKKIISTNIALQTLKKREASFANLNINGQNTNDFVDLDN
                     IVATEFKINMPAMIAKALAQTIIKTTLNVAVANNDSTGGWLSLATAVATAATNKADVR
                     SWRGLPKSIAIATIENDGNLEIKDPQGNILFQKSLDKNKNALVVVRSFAPYLPASVAI
                     MEK"
     gene            4383..4751
                     /locus_tag="RJ336_000222"
     CDS             4383..4751
                     /locus_tag="RJ336_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HDZ5212697.1"
                     /translation="MKKNILFILMFLLSACAPSYQINSNQNTVILGSNLPKSLVKQFQ
                     KRINSNGYLEFEVILRSTFAKDLIYKVDWLDKDGFVLRDVLNEDYQALRIPAGQEVIL
                     RKLASDTRAKDFRLEIKAKN"
     gene            4775..5398
                     /gene="lpoB"
                     /locus_tag="RJ336_000223"
     CDS             4775..5398
                     /gene="lpoB"
                     /locus_tag="RJ336_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HDZ5212698.1"
                     /translation="MKKTKILGTALIGALLFSGCAQTAYTDGKASQVKKGDALTLGLD
                     RQDFESAAETMINSMLSDPAFANIKPGTRKVIAIGRVVNDTPQRIDTEKLTAKITSAL
                     RKSGKFVLTSAVAAGGALDSMSEDVRELRDNDEFNQKTIAKKGTLVSPDFSLAGKIRQ
                     DNVKLSNGKTQVEYFFLLRLTDLTSGLVYWEDEQTIDKTGSSKSVTW"
     gene            5480..6817
                     /locus_tag="RJ336_000224"
     CDS             5480..6817
                     /locus_tag="RJ336_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212699.1"
                     /translation="MKKILFIGSLVMASLLYAQGSQPVEITQQDINTQNEMSDASTKD
                     ITPKSIEDFFEEFADNFGIEYGITKDGKTFYTGKSTVAVNDTDPQFAQALQNAYQKAM
                     LNLQSEFIRDAFGRIATSKIQNYEADNSTNAKEFDELPKGDKVDQILNKLTQLAGAQL
                     DKALKDLGIDTNSLSEDRKKTLLKQEFLNKTMTNAIGSMSGLVPVQTIVTQRRGEYDV
                     GVIAVISNKTRQLAKDMALARQSAIKGKGKAISEYLPKDTKGFLNEYGIRLVYDENGA
                     PIILSYGNWGYVADPSNAKKTNILEDRAKETALTMADAAIIEFINTNLSLKDERTTGD
                     TYEEIIKQSINVNDSSTQEQTQNITNIIDKVNSKIKASASGKIRGIRTLKKWSYTSEN
                     GIEHVGAVRFYSYENLANTNEALNSKSNTTKNEAKKSSSIQRSSNVVNSMDDF"
     gene            6827..8029
                     /locus_tag="RJ336_000225"
     CDS             6827..8029
                     /locus_tag="RJ336_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212700.1"
                     /translation="MKIIKILFLGLFLSLSLNAKVITTTSTKSSTGEGTGLTREDAIN
                     NAIIEAIGKMSGVSINSLKKSNTSVSTDNSGSNIQDNYSEQISKATKGRADTYEINSV
                     EQDANGKYTANVTIFKTTTTKKYQAPGLSADNRRSITVFDSTPDAAKRGIGSALQQKI
                     ISDLLQSRKFNVLDRDSSGYYEMEKALIKSGDAASDEVYKLKNVLATDYILLFSISGL
                     EGKQKTSNLTGKSKTEIEVIVDYRVLLFATRQIKFSNTLSMKVNLKDNSLSANEAALK
                     QIANRIAGDILNAIYPLKVASVENNEVVFSQSLNQGDVYECFALGKAIKDTYTKENIG
                     RVENKTGSIEITRTSPKLSYAKITEGGVKVGDICRPLIGSNSGNGYTIGRDANYQTEE
                     GGGVNLGF"
     gene            8188..8496
                     /gene="rplU"
                     /locus_tag="RJ336_000226"
     CDS             8188..8496
                     /gene="rplU"
                     /locus_tag="RJ336_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDZ5212701.1"
                     /translation="MYAIIKHSGKQYKVSVGDELKLDHFEAESKASIEVSEVLAINDK
                     ELKVGAPFVAGAKVVLEVINHGKDKKVVIYKKRRRKDSKLKRGFRRQFTRVVVKDIKA
                     "
     gene            8507..8761
                     /gene="rpmA"
                     /locus_tag="RJ336_000227"
     CDS             8507..8761
                     /gene="rpmA"
                     /locus_tag="RJ336_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDZ5212702.1"
                     /translation="MAHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTA
                     THAGNNVGMGKDHTIFALIDGFVKFERKDKDRKKVSVYPA"
     gene            8870..9907
                     /gene="obgE"
                     /locus_tag="RJ336_000228"
     CDS             8870..9907
                     /gene="obgE"
                     /locus_tag="RJ336_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HDZ5212703.1"
                     /translation="MFIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDI
                     IFVCDNNTHTLVNFKGKRELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNE
                     ILLDLTKEGQRELFLKGGKGGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIAD
                     VGLVGFPNVGKSTLISVVSNAKPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIE
                     GASGGKGLGLAFLKHIERTSFLLFVLDPMRQMPLKEQFIVLRKELEKFSNELFGRKFG
                     IMISKSDSVNLGEEFAEQITLNINELENYLKEINNPQSFLIKVSSLEKTGLKELKFML
                     LEEIKTLRNNK"
     gene            10030..10785
                     /gene="proB"
                     /locus_tag="RJ336_000229"
     CDS             10030..10785
                     /gene="proB"
                     /locus_tag="RJ336_000229"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDZ5212704.1"
                     /translation="MKRIVVKVGSHVISEENTLSFERLKNLVAFLAKLMEKYEVILVT
                     SAAISAGHTKLDIDRKNLINKQVLAAIGQPFLISVYNELLAKFNKLGGQILLTGKDFD
                     SRKATKHAKNAIDMMINLGILPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVI
                     LSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLL
                     EHNKKMFLASGFDLSVAKTFLLEDKQIGGTLFE"
     gene            10859..11776
                     /locus_tag="RJ336_000230"
     CDS             10859..11776
                     /locus_tag="RJ336_000230"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDZ5212705.1"
                     /translation="MKKIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVGRKQI
                     LTPSDTKAFLSQNYPSIPIFTPSSLKDENIIREIKDLNPDFIVVAAYGKILPKAILDL
                     APCVNLHASLLPKYRGASPIQSAILNKDEKSGVCTMLMEEGLDTGAVLESLECDIKDK
                     NSSEVFELLANLAAKLILSTLLNFDKIIPKKQEESLATLCRKIKKEDGLINLQNAREL
                     YQKYLAFTPWPGVFLENGLKFLELELVDELKQNARMGEILELEKESFLLACKQGVLRI
                     KKLQESGKKALDGRTYLNGKRLKSEDSLC"
     gene            11739..12392
                     /locus_tag="RJ336_000231"
     CDS             11739..12392
                     /locus_tag="RJ336_000231"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDZ5212706.1"
                     /translation="MEKGLKVKIVCVESIDSTHLFLCEQIRNGKIDGNFAIYALEQTN
                     GVGSRENSWQSSKGNLHLSFCIKEEDLPKDLPLASVSIYFAYLLKELLQEKGSKIWLK
                     WPNDLYLDDKKAGGVISAKISNFIIGGMGLNLKFSPQNTALCDIEISLKDLVSEFLQK
                     VEKKILWKNIFSKYMLEFEKSRKFSVHHEGKVFSLENSFLYEDGSILLGDKRVYSLR"
     gene            12389..13174
                     /locus_tag="RJ336_000232"
     CDS             12389..13174
                     /locus_tag="RJ336_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004278029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDZ5212707.1"
                     /translation="MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQAN
                     ATTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELPQLHLAPSNIGLVGIEQELAKGE
                     NNEKKMLLKNQIQEVIDEYDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGV
                     AMVLNTIKIIKKTINSKLRVRGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGNED
                     DFIVIPRNVKLAESPSFGKPIILYDIKSPGSVAYQNLAYSILG"
     gene            13180..14016
                     /locus_tag="RJ336_000233"
     CDS             13180..14016
                     /locus_tag="RJ336_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDZ5212708.1"
                     /translation="MGLNKDRGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPF
                     QPRKNFDQEALDELANSIKEFGLIQPIIVFKKNNKFILIAGERRLRAVKALGKKEILA
                     FIADIDENKLRELALIENIQRENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQI
                     TNTLRLLNLDIRTQELIASGKISQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKI
                     VKKIKNNESLPNQEFEDEIKKLKQILNRFGFDCKNKNNDFVIHLENIDKIKKLIKMLE
                     KL"
     gene            14077..14502
                     /locus_tag="RJ336_000234"
     CDS             14077..14502
                     /locus_tag="RJ336_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HDZ5212709.1"
                     /translation="MFEDMHPSIMLATMAIFLAMIVILNSMLYKPLLKFMDERNDSIK
                     NDENKVKENSQEVLGVNDELEAIHINTREEIQKIKQSAIAAAKEEAEQILRSKKEELE
                     RKMASFYADLAVQKKELQEHLNIHLPELKQALQNNIKKI"
     gene            14513..15025
                     /locus_tag="RJ336_000235"
     CDS             14513..15025
                     /locus_tag="RJ336_000235"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDZ5212710.1"
                     /translation="MSKLFFIIFLLPLYAFGASNGSGEYDIIPRTINFLIFVAILYYF
                     VATPFKNFYKNRIVKISSKLDEIQKKLLESKAKKLDTMKKLEEAKASAAAALITAKKE
                     AEILVQNIKKETQDELDLLQKHFEEQKDYEFRKMEKELVSNTLNEIFSDPNMTLKQSE
                     IIELMMKKVS"
     gene            15028..15549
                     /locus_tag="RJ336_000236"
     CDS             15028..15549
                     /locus_tag="RJ336_000236"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDZ5212711.1"
                     /translation="MENIIARRYAKAIASRADINDFYQNLCILNSAFVLPKFKNIIES
                     NEIKKERKMEFFDSFFDIKNSSFQNFLRLLIENSRLEYIPQIVKELERQKAFKENIFV
                     GIVYSKEKLSQENLKDLEVKLNKKFDANIKLNNKISQDDSVKIELEELGYELSFSMKA
                     LQNKLNEYILKII"
     gene            15563..17068
                     /gene="atpA"
                     /locus_tag="RJ336_000237"
     CDS             15563..17068
                     /gene="atpA"
                     /locus_tag="RJ336_000237"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDZ5212712.1"
                     /translation="MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL
                     KNIMAGEMVEFENGDKGMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEA
                     LIGRVVNALGEPIDAKGVINANEYRFVEEKAKGIMARKSVHEPLHTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAM
                     EYTIVVNAGASDPAALQYLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLI
                     LRRPPGREAYPGDVFYLHSRLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNV
                     ISITDGQIFLETDLFNSGIRPAINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYREL
                     QAFAQFASDLDEASRKQLERGQRMVELLKQPPYSPLSVEKQVVLIFAGTKGFLDDIAV
                     SRIKEFEDGIYPFIEAKHPDIFEQIRSKKALDSDLEEKLAKAINEFKVNHL"
     gene            17077..17961
                     /locus_tag="RJ336_000238"
     CDS             17077..17961
                     /locus_tag="RJ336_000238"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDZ5212713.1"
                     /translation="MSNLKEIKRKIKSVHNTQKTTNAMKLVSTAKLKKAEEAAKRSKI
                     YAQKIDEILSEISFQINKIVHNEDDVRLSLFHKKEQIKTVDLIFITADKGLCGGFNIK
                     TLKAVSEMLKEYEAKNINIRLRAIGKTGIEYFNFQKIELLEKYFHLSSSPDYEKACEV
                     IHAAVDDFLNGNTDEVILVHNGYKNMITQELKINHLIPVEPKSIEQTHNSLLELEPEG
                     TELLEDLMKTYFEYNMYYALIDSLAAEHSARMQAMDNATNNAKARVKQLNLAYNKARQ
                     ESITTELIEIISGVESMK"
     gene            17986..19383
                     /gene="atpD"
                     /locus_tag="RJ336_000239"
     CDS             17986..19383
                     /gene="atpD"
                     /locus_tag="RJ336_000239"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDZ5212714.1"
                     /translation="MQGFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLE
                     VAAHLGDNRVRTIAMDMTDGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGE
                     EISFDKKWAIHRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTV
                     IIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGA
                     RNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLA
                     SEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGI
                     YPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSEEDKL
                     VVERARKIEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFYMV
                     GNIDEAIAKADKLKG"
     gene            19387..19776
                     /locus_tag="RJ336_000240"
     CDS             19387..19776
                     /locus_tag="RJ336_000240"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDZ5212715.1"
                     /translation="MNDLINFEIVTPLGVIYQGEVKSVTLPGSEGEFGVLKGHATLVS
                     SLKSGVIDIEKADLNHELIAIDAGHAKVDEDKICVLAKGAVWVCGSDESEIEKNLAQA
                     KDLIKSMSSDNAALAATFSKLDNARMH"
     gene            19776..20330
                     /locus_tag="RJ336_000241"
     CDS             19776..20330
                     /locus_tag="RJ336_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDZ5212716.1"
                     /translation="MNFEAIFHFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLAT
                     WRNKEKESLETLLLGEKDLSRTDSILRKCNDTTSNHLEIYKNLASRRASAGLTWLSII
                     ASTSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISEALVATGCGILVAIPAYTFHL
                     IIKRKAFELLSIIDSEIKVISSSK"
     gene            20339..20728
                     /locus_tag="RJ336_000242"
     CDS             20339..20728
                     /locus_tag="RJ336_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HDZ5212717.1"
                     /translation="MPFDDEKPELNITPLVDIMLVLLAILMVTAPSITYEEKINLPQG
                     SQKNTSAPTVKSLIISINAKKEIFLNQEKYDFISFADNLAQRKAQFNTEDPVFIRADK
                     SLKYDDVISVLRSVKNLGFNKVALQTE"
     gene            20731..21510
                     /locus_tag="RJ336_000243"
     CDS             20731..21510
                     /locus_tag="RJ336_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HDZ5212718.1"
                     /translation="MKNYGLSNLNSFLLALAIYISIVILVFFRLVSEVEPAIQYTDIK
                     DSFVDIELAEPSKQVITQSNTPKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNF
                     NELFGNIKEIQEEKTTKIQSSAKSGASSAPKPQASELVKQLNDSLLQEESSTQGESTK
                     AQKIGIYDEFLGKVVRIITQRWTQYYPNSEKISVKVKIFIDENGKFGYTSVEKSGNPL
                     YDAKVAEFLESQKGKFITYPPQNKNISITMNLRDEAKVKND"
     gene            21520..22728
                     /gene="tolB"
                     /locus_tag="RJ336_000244"
     CDS             21520..22728
                     /gene="tolB"
                     /locus_tag="RJ336_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HDZ5212719.1"
                     /translation="MKKIVAIFLVFLGSLWAEDPVIDVVNSGVVLPKIIVKDNSNLSD
                     ENLKKSFYNIIVNDLKVSSNFEVVANATETSNYTFEYALNKNGNTLSLNVKIKAGGSD
                     KSEQTYTLNGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSSKKSQIIMAD
                     YTLTYQKVIVDGGLNLFPKWGNKEQTLFYYTAYDHDKLTLYRYDLNTNKASKILSSGG
                     MVVASDVSVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSK
                     VVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNNSAVSTYKDFLVYSSREPNQASVFNI
                     YLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFPL
                     RVGKIQSIDW"
     gene            22805..23302
                     /gene="pal"
                     /locus_tag="RJ336_000245"
     CDS             22805..23302
                     /gene="pal"
                     /locus_tag="RJ336_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HDZ5212720.1"
                     /translation="MKKILFTSIAALAVVISGCSTKSTSVSGDSSVDSNRGSGGSDGW
                     DIDSKISQLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEW
                     GTDEYNQALGLKRAKAVKEALIAKGVNADRIAVKSYGETNPVCTEKTKACDAQNRRAE
                     FKLSR"
     gene            23306..24253
                     /locus_tag="RJ336_000246"
     CDS             23306..24253
                     /locus_tag="RJ336_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDZ5212721.1"
                     /translation="MKKIFTVALLGATLLYAESSAFGAGDITSNSSYGLTSNEKLFKE
                     KLDNLNNENIQTNARINEINERIEGLQSTLEGINSQYAKSNSRLSQVEENNQNIENNF
                     TSEIQKLKAYVEESRKIQEANNKQVKKVLAELSSLVDAINANYVSKNELNDANLSVKT
                     ITPSVVVSTTDSNSTIENNNTQNTQDDKAKQIDESWKKKKNNEILELAIKDVDKNAFE
                     DSKAKLNFLITKQYKPARANFWLGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLY
                     HTAISLDKTGDTKTANGFYKALKTNYPNSPEAKASPNRK"
     gene            24268..24831
                     /locus_tag="RJ336_000247"
     CDS             24268..24831
                     /locus_tag="RJ336_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDZ5212722.1"
                     /translation="MAIEKNSVVSMFYELKDANTNEVLESNLYSQPISFILGKGQILE
                     SLEEEVMKLDCPSNADVVIKKEKGLGEYDENAVQTLPKEQFAGIDLKVGMELFGEGEN
                     GETVRVTVKEISENDVTIDYNHPYAGRDLLFSLNIVDARAASEDEILTGIIAGSHSCG
                     CGSGHGHDHHHGHGGGGCCGGGGCGCH"
     gene            24831..25751
                     /gene="fabD"
                     /locus_tag="RJ336_000248"
     CDS             24831..25751
                     /gene="fabD"
                     /locus_tag="RJ336_000248"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDZ5212723.1"
                     /translation="MKTAFIFPGQGSQSLGMGKDFYENSIKAKELLQNASDFCKIDFK
                     HLLFEENEKLNQSEFTQPAIVLNSLMAYSVLLEKKPDLSSKFALGHSLGEFSALAVNG
                     AFDFLEALSLVNKRGLFMQEDCVKVEAGMMVVLGLDDEKVEELCQKAQKENKQIFAAN
                     YNCDGQIVVAGLKPDLASYESVFKEAGAKRAMLLNMSVASHCPLLENASAKLCVELEK
                     VLKPNFKAVISNANAKIYTSKEEALELLKAQLISPVLYKQSIKACENEVDYFIEFGAS
                     VLKGLNKKITSKETYALTNMNDIDEFLKVI"
     gene            25748..26437
                     /gene="pfs"
                     /locus_tag="RJ336_000249"
     CDS             25748..26437
                     /gene="pfs"
                     /locus_tag="RJ336_000249"
                     /EC_number="3.2.2.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxyfutalosine nucleosidase"
                     /protein_id="HDZ5212724.1"
                     /translation="MMKIAILGAMSEEITPLLETLKDYTKIEHANNTYYFAKYKNHEL
                     VLAYSKIGKVNSTLSASVMIEKFGAQALLFTGVAGAFNPELEIGDLLYATKLAQYDLD
                     ITAFGHPLGFVPGNEIFIKTDEKLNNLALEVAKELNIKLRAGIIATGDEFICDEAKKA
                     KIREIFNADACEMEGASVALVCDALKVPCFILRAMSDKAGEKAEFDFDEFVINSAKIS
                     ANFVLKMCEKL"
     gene            26434..27189
                     /locus_tag="RJ336_000250"
     CDS             26434..27189
                     /locus_tag="RJ336_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HDZ5212725.1"
                     /translation="MINLSKKLIRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALAHL
                     LNRMQAHAPFKFELEAVTLSYGMGEDYSHLHAHCEEHGIKHSVLDSNIYEVSGDTIRE
                     NSSFCSYFSRMRRGALYTYALEKGFNKLAIAHHLDDAAESFFMNFIHNGALRTLAPIY
                     QSKRGVIVIRPLIFVRERQLRDNATQNELSVIGNEFCPGMKLSEKNVKFPHAREEAKQ
                     LLANLEKDHPKLFTSLKTAFANLHTESFWLQKA"
     gene            27194..27715
                     /locus_tag="RJ336_000251"
     CDS             27194..27715
                     /locus_tag="RJ336_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HDZ5212726.1"
                     /translation="MKKAFVLVDYQNDFIDGSLGFDKALKIKENILKALNQIDFNNTH
                     LLLTYDTHDEHYLQSKEGLNLPVKHCIKESLGWQMPKEFEPFLQKAHKIFYKNTFGSL
                     ELANFIQKSDYEELHFAGLVSHICVFCNIILAFGAKPNARIILHQNLSASFDENLEKS
                     AFDILRAYGIEIV"
     gene            27715..28329
                     /gene="recO"
                     /locus_tag="RJ336_000252"
     CDS             27715..28329
                     /gene="recO"
                     /locus_tag="RJ336_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecO"
                     /protein_id="HDZ5212727.1"
                     /translation="MQGFILHTQKVKDEDLIVYILSPKMLIKAYRFYGLRHSSILSGY
                     KIDFALEENPSFLPRLKDVLHLGFLWIMQRDKMLIWQEFIRLLYRHLKDVEELDSFYF
                     DLLDECVKRFEKQNPKRVIVDAYLKILEFEGRLHKDFFCFACDEKIQNPITLLRAFLP
                     SHSQCALGFEFEEKKLKQFYSSKNCAIFDDEEIENLYHLIKEGL"
     gene            28326..28736
                     /gene="ybeY"
                     /locus_tag="RJ336_000253"
     CDS             28326..28736
                     /gene="ybeY"
                     /locus_tag="RJ336_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDZ5212728.1"
                     /translation="MILSDEKCDFLESIASFLSPKDVELVFVDSKEMQEINLEQRKQD
                     KTTDVLSFPLENIDESLPLGSVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGF
                     DHENDNGEMREKEKELIECFNLPKSLIVRTLEIK"
     gene            28856..30058
                     /locus_tag="RJ336_000254"
     CDS             28856..30058
                     /locus_tag="RJ336_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212729.1"
                     /translation="MINGINSYSNYNYTNTFSNTTSNTKSSNAIANNNLVSDKSQAVD
                     KILGYGVDKEGFFTSDFNEAAGLPKDYKIYADGLNNFVNNFIKRQPFYSQIDIAKTIG
                     NAYNSFSSFVKDKGLGESFQEQDLKNLSQKDGVNYWQELQSDNAFIWKLTDENIADLG
                     SNKYQIHDNKISKGGALIAFFINNLSTIKGQTTLLGKLAGLNSDTDNNEIKEFLSFMN
                     KNPLKYSYEQDGWGNPMGDSLSIWNYINRAKNLGDDKLIKTIKNLGDEYNKLINSNMS
                     LEEFKTKYLDFKQRHDEFVKSLEEAEKAKGVDYSNPLKNTNNKETSEEGKEKPFKPIQ
                     AESKNKETYKDDNTRSELVKKLLKDKFSTSKELELLFGMKFSDDDAGEFNKILSLNST
                     PKSIDIKA"
     gene            complement(30083..31009)
                     /locus_tag="RJ336_000255"
     CDS             complement(30083..31009)
                     /locus_tag="RJ336_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HDZ5212730.1"
                     /translation="MIDFSKKPLFLAPMAGFSDLPFRNVVKKFGADITISEMISSNAL
                     VYESSKTLHMLERAELENPYIVQIAGGDKEVLKKAVQMLNEMDFVDGIDFNCGCPVNK
                     VVKQCAGSALLENLELFKNLVGVIKENNKKSLTSVKFRLGFNEKYPEKMAKICESLGV
                     DFVSIHGRTRKQLYSGKADYESIASAKESVKIPVIANGDINAQNAKEVYEITKCDGLM
                     IGRASVGNPWIFYEIKSGKSVDEKLKKEIILTHFDEMIKHYKDQGVSIFRKHLHEYSK
                     GYKDASAFRDEVNRIDNTEKMRKKIEEFFSLT"
     gene            complement(31006..31992)
                     /locus_tag="RJ336_000256"
     CDS             complement(31006..31992)
                     /locus_tag="RJ336_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212731.1"
                     /translation="MKIKLFLLASFIYIALIFAFAWHLELGSYTLNISTYTFELPIMI
                     WLVIPLFVYMILAVLHIAFYGFLRYLKFKHFFKDAAKFEAYTQDLLLEKDLKTTFQTK
                     EFRAVAQLFKTLKTHEKIPHSNKINEILDLIDGLNKNEFFNLSKFKLENNNVLYLQNE
                     KNHLKNDANYAYSKLKNLNEIKDEFEEIAFNTLIEKASYEQIKNVKIPKKPSEVLTLI
                     KRFKEGNLELSAAEYEVLLSHNILSEKDYLNAAKLSTKLLNPDAILGIFNKIKNEKSE
                     ALRAHLYLLAEFGLLDELREQIHNDDKKFNDFKAFLALREKNIKINLNQLIQ"
     gene            complement(31982..32344)
                     /gene="dksA"
                     /locus_tag="RJ336_000257"
     CDS             complement(31982..32344)
                     /gene="dksA"
                     /locus_tag="RJ336_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK suppressor DksA"
                     /protein_id="HDZ5212732.1"
                     /translation="MKKNEIQNFKNILEERKKTILENLQSNSNEIEALHNSVPSDSVD
                     FSIIETGSQIDFTISTNLKEELIEIENSLDKIKNGTYGICESCDDEIDSQRLKVKPHA
                     RYCITCRQIAEQGKKHEN"
     gene            complement(32356..32805)
                     /locus_tag="RJ336_000258"
     CDS             complement(32356..32805)
                     /locus_tag="RJ336_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDZ5212733.1"
                     /translation="MQVNIFCIQKSDEFKTWSEKYSKLISKYATLKEINVFNKKIALA
                     QNLNAIEAKKSYEEAFMPYKKGYCIALDEKGKELTSIEFAKLIQDKNELSFFIGGAYG
                     LREEFNQSLDFRLSLSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK"
     gene            complement(32807..33649)
                     /locus_tag="RJ336_000259"
     CDS             complement(32807..33649)
                     /locus_tag="RJ336_000259"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HDZ5212734.1"
                     /translation="MNFADIFSKIRRQQPSVKEAPNHWVKCQSCHALMYYKEIESCFN
                     VCPKCNYHMRISADERIKLLSDEGSFIEYDANLEAIDPLKFVDSKSYKKRLSEGESKT
                     GRKSSVISGECEINGLKTQLVVFDFSFMGGSLGSVEGEKIVRAVQRAITSKTPLVIVS
                     ASGGARMQESTYSLMQMSKTSAALKLLSKEKLPYISILTDPTMGGVSASFAWLGDLII
                     AEPEALVGFAGARVIKQTIGADLPEGFQKAEFLLEHGLIDAIVERGEQKQYLSDVLKF
                     FSGK"
     gene            complement(33658..34380)
                     /locus_tag="RJ336_000260"
     CDS             complement(33658..34380)
                     /locus_tag="RJ336_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HDZ5212735.1"
                     /translation="MKEFLDACLNANLQIRKYLNNIPQNDLKLCSKLGYDENQGYELD
                     LKCEQIFIKYLSCFGQIFSEESGLIGKDNPKQMILDPLDGSSNFVSKIPFYGTSIALI
                     EKDQAKSAFVCNLVSQEIFAFNNNQSFKSNLSDPKYSPLTPNLFSKIGIVEKISLYPE
                     LLDFLTKNQLKFRSLGATALSLAYASYFSFVLILGKTRIFDTVAALTIHQNLYIEKNE
                     NFLLLSQDKKIFDIILEFLKNN"
     gene            complement(34380..36599)
                     /gene="bamA"
                     /locus_tag="RJ336_000261"
     CDS             complement(34380..36599)
                     /gene="bamA"
                     /locus_tag="RJ336_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDZ5212736.1"
                     /translation="MKKHLISICALVAIANAATIKDIKFIGLNHLSNTSAINITGLKI
                     GEEINPAKINTAILNLYKQNYFENIAVENNNRILEIIVTEKPTIAKVTITGIASNDRK
                     QVESILGIKRGTLLDEGSIKEAIERIKAYYEAKSYFDTIVEYKKKTLENTDGLELEFI
                     VNRGENIIIDNVHLSGAKKFSYSDIEPAVVNKEKEFMGWMWGRNDGKLKVFELSNDSS
                     RIADEYMKKGYLDVQVSSPYLKTYTDTYQANLTYFIKEGKPYKIKSISIENPLFDDKQ
                     NAQTVKDLRSSAGKTINIEDIRKDVKTIETQSADLGYAFVEVYPDIQKNDQTQEATVV
                     FKVIPHDKVYIRNVIISGNSRTVDRVIRRELYITEGNLYNRTDLSESKNALKRTSYFD
                     DVNIKEEKVDDTHIDLIVDVKEASTGAISGGIGYGSSDGILLNASLSDTNIFGSGIKS
                     SVSVDKSDDTLSGRISLINPRVLDSQYSLGGTLYSNDYEWDNYSEKNYGFDITVGRQF
                     ARYYNVSLTYNLEQSDIYHLSPTLLRTGYELGKSIKSSITPAITFNNTDDYYLPRSGI
                     IASTSLEYAGLGGDQEFISSSSKFNFYQGLQDYIGYDLIYRYKASFYKVWDEGYLPIN
                     QRIYLGGIRSIRGFESRTVSPKNQWGDEVGGTIAFANSVELSFPLIDRIKLRGSVFFD
                     YGMIGRKNLDEIKRMSTGIGIEWITPIGPLQLVFAKPLNDKKGDDTNSFEFNLGTRF"
     gene            36676..37503
                     /locus_tag="RJ336_000262"
     CDS             36676..37503
                     /locus_tag="RJ336_000262"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HDZ5212737.1"
                     /translation="MKIAIIGLGLMGGSLGLCLKENKLISCVYGMDLSKENEKDALRL
                     GLIHELIEFKDLALCDMIFVATPVNAIIEILQKLVDLPSNVTIIELGSTKRKIIESLP
                     KNLIKQTLFAHPMTGTENSGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLG
                     MKIVFMDSKAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAK
                     SSPQMWESIFLQNKDNLLSSIDFFQQELERCKQMIQLDKNDELREWMKQANTLREIL"
     gene            37583..38956
                     /locus_tag="RJ336_000263"
     CDS             37583..38956
                     /locus_tag="RJ336_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDZ5212738.1"
                     /translation="MAKRKGKTYLSVLILVLIVILIFFISRLSIFEKNPPQILMPDVV
                     YTDLKKPILVHVKDDESSIKNVQIILHKDDNTSAMVIADEKISNLKDITLQVALPKFG
                     YKENVKSFVLEVIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAG
                     AVVFKADDANLDKVYIETNKGRIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKV
                     GNISKERIRYYFVNRKYRVSNINLTDKFLDGKIENLANQYAPKDNNLNRYEKFKFVNE
                     TLRNSNEELIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFADHRYYSYNGQFVSDS
                     YHMGLDLASVAQAPIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDL
                     DEMINKQSIIGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGK
                     KIILGKN"
     gene            38956..39840
                     /locus_tag="RJ336_000264"
     CDS             38956..39840
                     /locus_tag="RJ336_000264"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDZ5212739.1"
                     /translation="MKQLTLAKTVKGVGIGLHKGEPIEITLEPLEANSGIVFFRSDLN
                     ASYKASPENVINTQMATVLGDDRGFISTIEHLMSAINAYGIDNVRIVLNANEAPVMDG
                     SSISFCMMLDEAGVKELDAPKKIMVIKKPIEVRDGNKFVRLTPTKEPRINYTIKFDNA
                     VIGEQSYNFEFSKKNYIENIARARTFGFLKDVQALRSMNLALGGSLENTIVVDENRIL
                     NPEGLRFKDEFVRHKILDAIGDLTLLGYRVFGDYISYAGSHHLNHLLTKEVLKDKDAY
                     EIVSLEKTTQKAYEKVFA"
     gene            39879..40280
                     /locus_tag="RJ336_000265"
     CDS             39879..40280
                     /locus_tag="RJ336_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine biosynthesis
                     protein TsaB"
                     /protein_id="HDZ5212740.1"
                     /translation="MIGIYQDDKLIKTYKSEEKASEFLPKILDELLKEYDFTSLIYAN
                     GPGSYMGIKISYVSLSTLSIVKNIPLFAVSAFELNGYKPISANKNFCFVYKEGEICLE
                     QNIPAEFFLPKNLQELKLNNDNLPFYFLDAI"
     gene            40289..41167
                     /locus_tag="RJ336_000266"
     CDS             40289..41167
                     /locus_tag="RJ336_000266"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDZ5212741.1"
                     /translation="MKILVPATSANLGPGFDCLGLSLKLFNETQIQKSGVFSISIGGE
                     GSDNIFLKKNNIFVNIFYEIYEKLSGKKDNFRFIFQNNIPLSRGLGSSSAVIVGAIAS
                     AYYMSGFKVEKERILDEALIYENHPDNIAPATLGGFVCSLVEKNKVYSIKKEIDKDLA
                     AVVVIPNLAMSTEQSRQALAKNLSFNDAVFNLSHASFLTACFLEKKYEFLKFASQDKL
                     HEINRMKNLPELFEVQKFALENKALMSTLSGSGSSFFSLAFKDDALALVKKMQTKFKD
                     FRVQYLEFDDNGFEIC"
     gene            41192..41449
                     /locus_tag="RJ336_000267"
     CDS             41192..41449
                     /locus_tag="RJ336_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HDZ5212742.1"
                     /translation="MKKHIPIRMCIVCKNRFEQNMLFRFKVVLGDIVPKAEHGRSGYL
                     CQNCIEKEDKILQKAFSKICKNLNTKITQQGLKEIFLNGKD"
     gene            41436..44048
                     /gene="infB"
                     /locus_tag="RJ336_000268"
     CDS             41436..44048
                     /gene="infB"
                     /locus_tag="RJ336_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDZ5212743.1"
                     /translation="MAKIRIHEIAKELGYDSKEIIEKANELGLGIKTASNAVEPEIAA
                     AIYEYIQTREIPEAFKKNIKTPTAKKPKKENIKEQEKLNESEKKEPKKEEKLKQEVKK
                     EELKVEKENAKEEKQEIIDAHKPQSLASATLAKRRGLVIVKKKKDEEEIQVKKEEVKN
                     SNDISINNEERLSLKTMFSNADESLKKKKKEKKSFVASKKESTEKMNFLDEHDFGDIS
                     LDDEDEVVLPDFSVKEQEKPQNINKKQPNFIRQAVGNSAGFGLEGGIQRRSRKKPPKK
                     IEKKEVEEVSSVAISKEIRVYEFADKIGKSTSEVISKLFMLGMMTTKNDFLDEDAIEI
                     LAAEFGIEINIINEADEFDYVKDYEEEIDEKDLVTRAPVITIMGHVDHGKTSLLDYIR
                     KSRVASGEAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVVA
                     ADDGVKPQTKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGSY
                     EFVGVSAKTGMGIEDLLEIVLLQADILELKANPKSFAKASIIESSVQKGRGAVATIIV
                     QNGTLTVGSTVVAGEAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIAV
                     KTDKEAREYANKRHEYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSLE
                     ALKASLEKLRNDEIKVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEVKERAK
                     DKGVEIKTYNVIYNLLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKIGQIAGCMV
                     TEGVINRGAKIRLIRDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVGD
                     YIESYKEVQEQASL"
     gene            44045..44407
                     /gene="rbfA"
                     /locus_tag="RJ336_000269"
     CDS             44045..44407
                     /gene="rbfA"
                     /locus_tag="RJ336_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDZ5212744.1"
                     /translation="MNPSEIKKLRTESILKELIPEALANLDDENLKNLCVVDVECKKG
                     RYDAFVYLDKMFFNVHEQEKILSSLKKASRALQNYCMSEQGWYRCPNFHFKFDDRLEY
                     QNHMDALFEKIKKDKNES"
     gene            44397..>44809
                     /gene="rimP"
                     /locus_tag="RJ336_000270"
     CDS             44397..>44809
                     /gene="rimP"
                     /locus_tag="RJ336_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDZ5212745.1"
                     /translation="MNLEALCKEAELSFYDDELVSENGRKIYRIYVQKEGGVNLDDCA
                     RLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSRIEHFAKSIGELVKITTNEKEKFE
                     AKIIAVDDENITLENLENKEKTTINFNDIKKARTF"
BASE COUNT        16180 a         5837 c         8106 g        14686 t
ORIGIN      
        1 ggatataaaa atacttaatt tattgtattt gaaagtagtt ttattgttaa ccaattatta
       61 actaaaaatg caatatcatt attttatgat ttaaatcaaa aatttttgat tttaaattaa
      121 aatactttta tgaaaggttc aaaatgggaa caagaaaaga acatgatttt attggggaat
      181 tagaaatctc tgatgaggtt tattatggag tgcaaacttt tagagctgtt gaaaattttg
      241 atatttctca tgatagatta aaagattttc ctcgctttgt tagagctttg gctagagtaa
      301 aaaaagctgc agctatggca aatcatgaat taggtctttt agataaaaat atccaagatg
      361 cgattattaa agcgtgcgat aaaattttag aaggcgggta ttatgatcaa tttgtagtag
      421 atatgatcca aggaggtgct ggaacaagta caaatatgaa tgctaatgaa gttatagcga
      481 acataggact tgaacttatg ggtcataaaa aaggtgaata ccaatatctt catccaaatg
      541 atcatgttaa tttaagtcaa agtactaatg atgcttatcc tacagcttta caccttgcct
      601 tgcatgatta tttaagtgat ttggcaaaag ctatggaaca tctaaaaaaa gcttatgaga
      661 gaaaagctga agaatttaaa gatgttctta aaatgggtag aacccaactg caagatgctg
      721 tacctatgac tttaggtcgt gaatttaaaa cttttgctgt aatgataggc gaagatatac
      781 aaagagtatt agaagctaga aaattaattt tagagatcaa tttgggtgga actgctattg
      841 gaacgggaat taattctcat cctgattatc cgaaggttgt agaaagaaaa ataagagaag
      901 tgacaggttt tgaatatact gtggctgagg atttgatcga ggcgactcaa gatacgggag
      961 cttatgtaca aatttcaggt gttttaaaac gtgttgcaac aaaactttct aaagtatgta
     1021 atgacttaag acttttaagc agtggtccaa aatgtggtct taatgagatt aatcttccaa
     1081 aaatgcaacc aggtagttct attatgccag gtaaggtaaa tcctgttatt cctgaagtag
     1141 ttaatcaagt ttgttatttt gttattggag cagatgtaac tgtaactttt gcttgtgagg
     1201 gtggacaatt acaacttaat gtttttgaac cagttgcagc gtatagctta tttaattcta
     1261 ttgtaatgct agaaaaagca atgtatactt tagctgataa atgtatagat ggtattactg
     1321 caaatgaaaa aatttgttca gacttcgtct ataattcagt aggtatagta acagctttaa
     1381 atccttatat tggttatgaa aattcagctt ctatagctaa agaggcaatg aatactggaa
     1441 aaagagtggc tgatattgcg cttgaaagag ggcttttaag taaagaacaa attgatgaaa
     1501 ttttaactcc atcaaatatg ctaaatcctc acatggaagc taaaaaatag cattttagga
     1561 tttaatatgg atataatgat aattttgcaa gtaatcgtcc ttcttggggc gatttttatc
     1621 ggtattcgcc taggcggtat tgctataggt tatgctggag gattaggtgt agttatacta
     1681 ggacttgttt taggtatgaa acctggtaat attccttggg atgttatttt aattattgct
     1741 gcagctattg cagcaatttc tgctatgcaa caagcaggtg gacttgatta tatggtaagg
     1801 gtgacagaaa aaattttaag atcaagccct aaatttataa attatttagc tccagcttgt
     1861 ggatggttgc ttacaatctt agcaggaaca ggaaatgcag tattttcttt aatgcctgtt
     1921 gtagttgatg ttgcaaaatc tcaaaatata aaacctagtg ttccactttc attaatggtt
     1981 gtttcttcgc aaattggaat cactgcttct cctgtgagtg cagctgtggt ttatatgagt
     2041 ggcgttttag agccacttgg atggaattat ccaactttaa ttggaatttg gatcagtaca
     2101 acttttatag cttgtatgct tacagctttt atagtgagtt taatcactcc tatggattta
     2161 agcaaagata gcgtttatca agaacgctta aaagcaggac ttgttaaaga tgcaggagct
     2221 attttacatg gtgaagataa accaggtgct aaactttcag taggaatttt cttgatcact
     2281 gttttggcag ttgtacttta tgcaaccgca atttcaagca atattaaatg gattgatcct
     2341 gttgtggttc caagagatgc agctattatg agctttttac ttactgcagc aactttgatc
     2401 acttggcttt gtaaagttga accaggtaaa attcttgata ccagcgtatt taaaagtggt
     2461 atgactgctt gtgtttgtgt ttttggtgta gcatggcttg gaaatacttt tgttgcagga
     2521 cacgaagctt ctattaaaga agtagcaggc gactgggtta aacaaacccc tgctatgtta
     2581 gcagttgcat ttttctttgc aagcatgctt ttatattctc aagcagcaac cgcaaaggcc
     2641 attgtacctg taattatcac tgctttagga atttcagcag caaatccgca tgattcttat
     2701 atgcttgtag cttgttttgc agcagtttcg gcactttttg tgcttccaac ttatccaacc
     2761 ttactcggtg ctgtgcaaat ggatgataca ggaacgacta gaattggtaa atttatattt
     2821 aatcactctt tctttatacc aggagtttta gctattgcaa ttgctgtagc attaggcttt
     2881 gtattagctc ctatgcttat ttaaatcaaa ccctaggttt ttctctccta gggttaaaat
     2941 tttttcatta gtttttaagt atatactacg ctataatatt catttttaat tttctttaag
     3001 aaaggaattt aatgaagata aaagttgggt tgattttttc aggtattgtt tgcctttttt
     3061 taacagcttg tgttaatcag gttaaacaaa atacaacatt tgaaaatgct ttaacacaaa
     3121 aatattgtgg tgatgatttt ttcaatcaaa atttagaaaa aattaaaaaa aatgatgatg
     3181 tcatttatac aggattaaat gcaggtttga ttgctagaaa ttgtggtgat tttaacaaaa
     3241 gtaatgtatt ttttgatgct gcggaagaat cttataaata tgatgtggat ttagaaaatg
     3301 taggctctaa agcagctaaa tttgttggta caaccttgct taatgatact atagttgatt
     3361 atgatggttc tttatatgaa agaattatgg ttaatatata taaagctcta aactatatgg
     3421 aagaagatga ttatgaaaat gcaagagttg agtttaatcg tgctttaatg cgtcaagata
     3481 aggcaaaaga atattttgct aaagaaattg agaaaaatcg tgctgattta gataaggcaa
     3541 aagaagataa aaattatgat aaaaatatga atgaaaactc aaaagttata gaagcacaat
     3601 acgataactt gtttaaagag tttgatacaa caaaaaattt cataaatcct tatgcgactt
     3661 atcttgcttc aatatttttc tttatggata aagattatag aaaagctgca gatttattga
     3721 gagaagtagc tattatttat ccaaaaaata aaactatcaa aaaagaggct aaaattttta
     3781 aagaatatgc cacaaaaata aaagtcaaaa aagctaaaaa atatgttttt gtagtttatg
     3841 aaaatggatt tggtgtagtt aaggatgaat ttgctttaac cttacctttt atagtggata
     3901 aaaaaattat tagcacaaat attgctttac aaaccttgaa aaaaagggaa gcttcttttg
     3961 caaatttaaa tataaatggt caaaatacaa atgattttgt agatttagac aatattgttg
     4021 ctactgaatt taaaataaat atgcctgcaa tgattgctaa agccttagct caaactataa
     4081 ttaaaaccac tttaaatgta gctgttgcaa ataatgactc tacaggtgga tggctaagtc
     4141 ttgcaacagc agtagcaact gctgcaacca acaaagctga tgtgcgttct tggagaggtt
     4201 tgccaaaaag tattgccata gcaacaatag aaaacgacgg aaatttagaa atcaaagatc
     4261 cacaaggcaa tattttgttt caaaaatcat tggataaaaa taaaaatgct cttgttgtag
     4321 tgcgttcttt tgctccgtat ttacctgcaa gtgttgctat catggaaaaa taaggctaaa
     4381 agatgaaaaa aaatatttta tttattttaa tgtttttact tagtgcttgt gcgccaagtt
     4441 atcaaataaa ttcaaatcaa aatactgtaa ttttaggttc aaatttacca aaaagtttag
     4501 taaaacagtt tcaaaagcgt ataaatagca atggttattt agaatttgaa gtgattttac
     4561 gcagtacttt tgctaaagat ttaatttata aagtggattg gttagataaa gatggttttg
     4621 tgctaagaga tgttttaaat gaggactatc aagcccttag aattccagca ggacaagagg
     4681 tgattcttcg taaacttgca tctgatacaa gagcgaagga ttttagatta gaaattaaag
     4741 caaaaaatta atctcatttt aggaaggata aatcatgaaa aaaacaaaaa ttttaggaac
     4801 agctcttatt ggagctttgc tttttagtgg ttgtgcgcaa acagcttata cagatggaaa
     4861 ggcaagtcaa gtgaaaaaag gcgatgcttt aaccttgggt cttgatagac aagattttga
     4921 aagtgcagct gaaactatga taaatagtat gttaagcgat cctgcttttg caaatattaa
     4981 accaggtaca agaaaggtta ttgctattgg tagggttgtg aatgataccc cgcaaagaat
     5041 cgatactgaa aaacttaccg caaaaatcac ttctgcatta agaaaatcag gtaaatttgt
     5101 tctaacttca gcagttgctg caggcggagc acttgatagc atgagtgaag atgtaagaga
     5161 attaagagat aatgatgagt ttaatcaaaa aaccatagca aaaaaaggga cattggtatc
     5221 gcctgatttt tctcttgcgg gtaaaattag acaagataat gtaaaactta gcaatggtaa
     5281 aactcaagta gaatactttt tcttgttaag acttactgat ctaacatcag gtttagttta
     5341 ttgggaagat gagcaaacta ttgataaaac cggttctagt aaatcagtta cttggtaaaa
     5401 taaaaattaa tttatgaata aaatttttag ctcaagtgtt tagcttgagc tttttttatg
     5461 atttttaaaa ggatatgaaa tgaaaaaaat attatttatc ggctctttag ttatggcaag
     5521 tttactttat gcacaaggtt cccagcctgt agaaattaca caacaagata taaatactca
     5581 aaatgaaatg tctgatgcaa gcactaagga tattacccca aaatcaattg aagatttttt
     5641 tgaagaattt gcggataatt tcggtataga atatggtata accaaagatg gaaaaacttt
     5701 ttatacagga aaaagtactg ttgctgtaaa tgatactgat ccacaatttg cacaagcttt
     5761 acaaaatgct tatcaaaaag caatgttaaa tttacaaagc gaatttataa gagatgcttt
     5821 tggaagaatt gctacaagca agattcaaaa ttatgaagca gataattcta ctaatgctaa
     5881 ggaatttgat gaattgccaa aaggtgataa ggttgatcaa attttaaata aacttacaca
     5941 attagctggt gctcagcttg ataaggcatt aaaagattta ggtatagata caaattcttt
     6001 aagcgaagac agaaaaaaga ctttattaaa gcaagaattt cttaataaaa ccatgacaaa
     6061 tgccataggt tctatgagtg gacttgttcc tgtgcaaact atagttacac aaagaagagg
     6121 tgagtatgat gtaggtgtta ttgctgttat ttccaataaa actcgccaat tagcaaaaga
     6181 tatggcacta gcaagacaga gtgctattaa gggtaaaggc aaggcaataa gtgagtatct
     6241 gccaaaagat acaaaaggct ttttaaatga atatggaatt cgcttagttt atgatgaaaa
     6301 tggtgcgcct attattttaa gttatggaaa ctggggttat gtagcagatc ctagcaatgc
     6361 taaaaaaaca aatattttag aagatagagc caaagaaaca gcacttacta tggctgatgc
     6421 tgctattata gagtttatta atacaaattt aagtcttaaa gatgaaagaa caactggtga
     6481 tacttacgag gaaatcatca aacaaagtat taatgttaat gatagttcca ctcaagaaca
     6541 aactcaaaac ataacaaata ttattgataa agtaaatagt aaaataaaag caagcgcaag
     6601 cggtaaaatt cgtggtattc gtactcttaa aaaatggagt tatacaagtg aaaatggtat
     6661 tgaacatgta ggagctgtga gattttattc ttatgaaaat ttagctaaca caaatgaggc
     6721 tttaaattca aagtcaaata caacaaaaaa tgaagctaaa aaatcttcta gcatacaaag
     6781 aagctctaat gttgtaaata gcatggatga tttttaaagg taaaagatga aaataattaa
     6841 aattcttttt ttaggcttat ttttaagcct aagtcttaat gctaaagtta taaccacaac
     6901 ttcaacaaaa tcaagcacag gcgaaggcac aggcttgact agggaagatg cgataaacaa
     6961 tgccattata gaagctatag gaaaaatgag cggagtaagc atcaattctc ttaagaaatc
     7021 taacactagt gtttcaactg ataattcagg ttcaaacata caagataatt acagcgagca
     7081 aatttcaaaa gccaccaaag gtagagccga tacttatgaa atcaatagtg ttgaacaaga
     7141 tgcaaatggt aaatatacag ccaatgtaac gatttttaaa accacaacaa caaaaaagta
     7201 tcaagctcca ggtttaagtg cagataatag aagaagtatt actgtttttg attctactcc
     7261 agatgctgca aaaagaggta taggctcagc tttgcaacaa aaaatcattt ccgatttatt
     7321 gcaaagtcgt aaatttaatg ttttagaccg tgattctagt ggctattatg aaatggaaaa
     7381 agctttaatc aaaagtggcg acgcagctag cgatgaagtt tataaactta aaaatgtgtt
     7441 agcaacagat tatattttat tgttttctat ttcaggactt gaaggtaaac aaaaaacaag
     7501 caatttaaca ggaaaaagca aaactgaaat tgaagttatc gtagattatc gtgtgctttt
     7561 atttgctaca agacaaatta aattttctaa tactttaagt atgaaagtca atcttaaaga
     7621 caatagtctt agtgccaatg aagctgcact caaacaaatt gcaaatcgta ttgcaggaga
     7681 tattttaaat gcaatttatc ctttgaaagt tgcaagcgtt gaaaacaatg aagtagtatt
     7741 ttctcaaagc ttaaatcaag gtgatgttta tgaatgtttt gctcttggca aggctataaa
     7801 agatacttat acaaaagaaa atataggaag agtagaaaac aaaacaggaa gtattgaaat
     7861 cactcgcaca agccctaaac tttcttatgc aaaaatcaca gaaggtggtg taaaagtggg
     7921 cgatatttgt agacctttaa ttggtagcaa tagtggaaat ggctacacta taggtcgtga
     7981 tgcaaattat caaaccgaag aaggtggcgg agtaaatctg ggattttaaa tttttagagt
     8041 ttgatttttc tcaaactcta aatcctttct taaattcatc aaaaattaaa gaaaaatttt
     8101 gtaaaatcga aattttatta aaccactaaa gcttttaaat ccgttattgc ggtgctttat
     8161 ggtactacca atttataagg aaaagcaatg tatgctatta tcaaacacag cggaaagcaa
     8221 tacaaagtaa gtgttggcga tgagctaaaa ctagatcact ttgaagctga aagcaaagca
     8281 agtattgaag taagcgaagt tcttgctatc aatgataaag aattaaaggt aggtgcgcct
     8341 ttcgtagcag gtgcaaaagt tgttttggaa gtgatcaatc acggaaaaga taaaaaagtt
     8401 gtgatttaca aaaaaagacg cagaaaagat tctaaactca aacgcggttt tagaagacaa
     8461 tttactcgcg ttgtagtaaa agatatcaaa gcttaaggag taaagaatgg cacacaagaa
     8521 aggtcaaggt tcaactcaaa ataaccgcga ttctataggt cgtcgtttag gtgttaaaaa
     8581 atttggtggc gagtttgtta gagctggaaa tatcatcatc cgccaaagag gaactgcaac
     8641 tcatgcaggt aacaatgtag gtatggggaa agatcatact atctttgctt tgattgatgg
     8701 ttttgtaaaa ttcgaaagaa aagataaaga tagaaaaaaa gtttctgtat accctgcata
     8761 agtttttagg acgctttttt agcgtcttga aaactttaaa tttataaatt taacttcttt
     8821 ttatttgctc aaatttagct ttataaattt aaagtcaaag gcaatttaaa tgtttattga
     8881 tagtgttaaa attactttag cttcaggcga tggtggtaaa ggtgctgtaa gttttcgtcg
     8941 tgaaaaacat gttccacttg gtggccctga tgggggagat ggtggaaatg gtggcgatat
     9001 tattttcgta tgtgataata atacccacac tcttgtaaat ttcaaaggca aaagagaatt
     9061 acgcgcacaa aatggtgctg gtggaatggg acgcaataaa aatggcaaaa aaggtgaaaa
     9121 tttagaactt atagtacccg aaggaacgca agttatcgat gcacaaacta atgaaatttt
     9181 actcgatctt accaaagaag gacaaagaga gcttttttta aaaggtggaa aaggcggact
     9241 tggcaacact cattttaaac acgccaccaa tcaacgcccc gattacgcac aacctggtat
     9301 aaaaggagaa agtcgcttag tcagacttga acttaaactt attgccgatg tagggcttgt
     9361 aggttttcca aatgtaggaa aatctactct tataagcgtt gtttcaaatg caaaacctga
     9421 aattgcaaat tatgaattta ctacccttac tccaaaactt ggactcgtgg atgtagatga
     9481 gtataattcc tttgttatgg ctgatattcc agggattatc gaaggagcaa gtgggggtaa
     9541 aggcttagga cttgcctttt taaagcacat agaaagaacg agctttttac ttttcgtgct
     9601 agatcctatg aggcaaatgc ctttaaaaga acaatttata gtactaagaa aagaacttga
     9661 aaaattttcc aatgaacttt ttgggcgtaa atttggtatc atgatttcaa aaagtgatag
     9721 tgttaattta ggagaagaat ttgccgagca aattacttta aacattaatg agttagaaaa
     9781 ttatctcaaa gaaataaata acccacaaag ctttttaatc aaagtctcaa gccttgaaaa
     9841 aacaggactt aaagaactta aattcatgct tttagaagaa attaaaactt taagaaataa
     9901 caaataaaaa ttttaacaat ctaggaagtg ttttatatta aaaatttcaa acactcccta
     9961 ttttttcaaa aaataactag tttatatgaa attttggcta aaattataaa aattttttaa
    10021 ggaataagca tgaaaagaat agttgttaaa gtgggttctc atgtgattag cgaagaaaac
    10081 actttaagtt ttgagcgtct taaaaattta gtcgcatttt tagctaaact catggaaaaa
    10141 tatgaagtga ttttagtaac ttcagcggct atttcagcag gacacaccaa actagatatc
    10201 gatagaaaaa acctcattaa taaacaagtt ttagccgcta ttggacaacc ttttttaatc
    10261 agtgtttata atgaactttt agccaaattt aacaaactag gcggacaaat tttacttaca
    10321 ggtaaggatt ttgactctag aaaagctact aaacacgcaa aaaatgctat cgatatgatg
    10381 ataaatttag gaattttacc tatcatcaat gaaaatgacg ctacagctat agaagaaatt
    10441 gtctttggtg ataatgatag cttaagtgct tatgctacgc atttttttga tgcggatttg
    10501 cttgtgattt taagcgatat tgatggattt tatgataaaa atcctagtga atttagtgat
    10561 gcaaagcgtt tagaaaaaat cactcatatt aaagaagaat ggctacaagc aaccataaaa
    10621 acaggtagtg agcacggaac aggtggtata gtaaccaaac ttaaagcagc taaattttta
    10681 cttgaacaca ataaaaaaat gtttttagca agtggctttg atttaagtgt ggcaaagaca
    10741 tttttattag aagataagca aataggtgga actttgtttg agtgattaat ttattaaatt
    10801 ctcttttaaa atcaaataag ttataattaa aacttttaat ttcacacaaa gcgaaaaaat
    10861 gaaaaaaatt atttttatgg gtactccatc ttatgcaact tgtattttaa aagcactagt
    10921 agaaaatgaa aattttaaac tcgtagcact ttttacccag cctgataaag ccgtaggtag
    10981 aaagcaaatt ttaactccaa gtgatactaa ggctttttta agtcaaaatt atcctagtat
    11041 tcctattttt actccaagtt ctttaaaaga tgaaaatatt ataagagaga ttaaggattt
    11101 aaatcctgat tttatcgtgg ttgctgccta tggaaaaatt ttacctaaag ccattttgga
    11161 tttagcacct tgtgtgaatt tgcacgcttc tttacttcca aaataccgtg gtgccagtcc
    11221 gattcaaagt gcgattttaa ataaagatga aaaaagtgga gtttgcacca tgcttatgga
    11281 agaagggctt gatacaggtg ctgtacttga aagcttagag tgtgatataa aagataaaaa
    11341 ttcaagtgaa gtttttgaac ttttagcaaa tttggccgct aagctcatcc tctctactct
    11401 tttaaatttt gataaaatta tccctaaaaa acaagaggaa agtctagcaa cgctttgtag
    11461 aaaaatcaaa aaagaagatg ggcttataaa tttgcaaaat gcaagagaac tttatcaaaa
    11521 atatctagct tttacccctt ggcctggagt tttcttggaa aatggactta aattcttaga
    11581 gcttgaactt gtggatgaat taaaacaaaa tgctaggatg ggtgaaattt tagaattaga
    11641 aaaagaaagt tttttgcttg cttgcaaaca aggagttttg cgtattaaaa aacttcaaga
    11701 aagtggaaaa aaagctcttg atggtaggac ttatttaaat ggaaaaaggc ttaaaagtga
    11761 agatagtttg tgttgaaagt atagactcaa ctcatctttt tttatgcgag caaatacgca
    11821 atggaaagat tgatggaaat tttgctattt atgctttaga acaaacaaat ggagttggaa
    11881 gtagggaaaa ttcttggcaa agctctaaag gaaatttaca tctttctttt tgtattaaag
    11941 aagaagattt gccaaaagat ttgcctttgg cttctgtaag tatttatttt gcttatttac
    12001 ttaaagaact tttacaagaa aaaggttcta aaatttggct taaatggcct aatgatttat
    12061 atttagatga taaaaaagct ggaggggtta taagtgctaa aatttcaaat tttatcatag
    12121 gcggtatggg tttaaatctg aaattttcac cccaaaatac agctttatgt gatatagaaa
    12181 tttcgcttaa agatttagtg agtgagtttt tgcaaaaagt agaaaaaaaa attttatgga
    12241 agaatatttt tagcaagtat atgttagaat ttgaaaaatc aagaaaattt agcgtccatc
    12301 atgaaggtaa agttttttca cttgaaaatt cttttttgta tgaagatggt tcaattttac
    12361 taggtgataa aagggtgtat agtttaagat gagcgaaatt attacaatag caaatcaaaa
    12421 aggtggagta ggaaagacta caacagcagt aaatttagcc gcttctttag ctgtggctga
    12481 aaaaaaagta cttttgattg atgttgatcc gcaagctaat gcgactacag gacttggttt
    12541 taatcgtaat aattatgagt ataatattta ccatgttttt ataggaagaa aaaagctttc
    12601 agatattatt ttaaaaacag aattgccaca acttcattta gctccttcaa atataggtct
    12661 tgtaggtata gaacaagagc ttgctaaagg tgaaaataat gagaaaaaaa tgctgcttaa
    12721 aaatcaaatt caagaagtga ttgatgaata tgattttatt attattgatt ctccgcctgc
    12781 tcttggaagt attactataa atgcttttgc agcaagtgat agtgtaatta tccctataca
    12841 gtgtgaattt tatgcgctcg agggtgtagc tatggtttta aatacaatta aaattatcaa
    12901 aaaaactatt aattctaaac tcagggttcg tggattttta ccgacaatgt atagctctca
    12961 aaataatctt tctaaagatg ttgtagatga tttgaaacaa aattttaaaa aacaactttt
    13021 tactattaat ggaaacgaag atgactttat tgtgatccct cgcaatgtaa aacttgcaga
    13081 aagtccaagt tttggaaagc ctataattct ttatgatatt aaatcgccag gttctgttgc
    13141 ttatcaaaat ttggcgtatt ctatattagg ataattataa tggggttaaa taaagatagg
    13201 ggtttaagta gtttaatcag tgatatggat actgtttata gtaaagaatt gggttttgat
    13261 aaaaatcaaa gcactatgat agaaattgat caaatttcac ccaatccatt tcagccaaga
    13321 aagaattttg atcaagaagc tttagatgaa cttgctaatt ctatcaaaga atttggactt
    13381 attcagccta ttattgtatt taaaaaaaat aataaattta ttttaattgc tggggaacgt
    13441 cgcttaagag cagtgaaagc attaggaaaa aaagaaattc tagcttttat tgctgatatt
    13501 gatgagaata agcttagaga attggctctt attgaaaata tacaaagaga gaatttaaat
    13561 cctattgagc ttgctaattc ttataaggat ttaatgcaag ttcataaaat tactcaagag
    13621 aatttagcag aacttattca taagtctcgt actcaaataa caaatacttt aagacttctg
    13681 aatttagata ttagaactca agagttgatt gcttctggaa aaatttctca gggtcatgct
    13741 aaagttttgg ttggtttaga tcaaaaagat gaaaaaatgt tggttgatag cataataggt
    13801 caaaaactta atgttagaga tactgaaaaa atagttaaaa aaataaaaaa taatgaaagc
    13861 ttacctaatc aagaatttga agatgaaata aaaaaattaa aacaaatact aaatcgcttt
    13921 ggatttgact gcaaaaataa aaataatgat tttgtaattc atttagaaaa tattgataaa
    13981 attaaaaaat taatcaaaat gcttgaaaag ctttaaccaa aatcttagct tttttatggt
    14041 aaaatagtcc ttcgaaaatt ctaaccaagg agaattatgt ttgaagatat gcatccttcc
    14101 ataatgcttg ctactatggc tattttttta gctatgatag ttattttaaa tagtatgctg
    14161 tataagccgc ttttaaaatt tatggatgaa agaaatgatt ctataaaaaa tgatgagaat
    14221 aaagtaaaag aaaattctca agaagtttta ggtgtgaatg atgaattaga agctattcat
    14281 attaacacta gagaagaaat tcaaaaaatt aaacaaagtg ctatagctgc tgctaaagaa
    14341 gaggcagagc aaattcttag aagcaagaaa gaagaattag aaagaaaaat ggccagtttt
    14401 tatgcagatt tagccgttca aaaaaaagag ttgcaagaac atttaaacat acatttacct
    14461 gagcttaagc aagctttgca aaataacata aagaaaattt aagaggagag aaatgagtaa
    14521 gttattcttt attatatttt tgctaccttt atatgctttt ggtgcatcaa atggtagtgg
    14581 agaatatgat attattccaa ggactattaa ttttctaatt tttgtggcta tattgtatta
    14641 ttttgttgca actccattta aaaattttta caaaaaccgt attgtaaaaa tttcttctaa
    14701 acttgatgaa attcaaaaaa aacttttaga aagtaaagct aagaaattag acacgatgaa
    14761 aaaacttgaa gaagctaagg caagtgctgc tgccgcttta attacagcaa aaaaagaagc
    14821 tgaaatttta gttcaaaata ttaagaaaga gactcaagat gagttagatt tacttcaaaa
    14881 acattttgag gaacaaaaag attatgaatt tagaaaaatg gaaaaagaat tagtatcaaa
    14941 tactttaaat gaaatttttt ctgatccaaa tatgacatta aaacagagtg aaataataga
    15001 acttatgatg aagaaggtat cttaaatatg gaaaatataa ttgcaagaag atatgcaaaa
    15061 gcgatagctt caagagctga tataaatgat ttttatcaga atttgtgtat tttaaattct
    15121 gcttttgttt tgccaaaatt taaaaatatt atagaatcta atgagattaa aaaagaaaga
    15181 aaaatggaat tttttgattc tttttttgat attaaaaatt ctagttttca aaatttttta
    15241 agacttttga ttgaaaattc aagattagaa tacattcctc aaatagttaa agaacttgaa
    15301 agacaaaaag cttttaaaga aaatattttt gttggtattg tatattctaa agaaaaatta
    15361 agtcaagaaa atcttaaaga tcttgaagtc aaacttaaca aaaaatttga tgcaaatatt
    15421 aaactaaata ataaaatcag tcaagatgat agtgttaaaa tagaattaga agaattaggt
    15481 tatgaacttt ctttttctat gaaagctctt caaaataagc taaacgaata tatattgaaa
    15541 attatctaag gagaaaaagt aaatgaaatt taaagctgat gagatcagtt caataatcaa
    15601 agaaagaatt gaaaattttg atttaaatct tgaaattgaa gaaacaggaa agattatttc
    15661 tgtagctgat ggtgttgcta aggtatatgg acttaagaat attatggctg gagaaatggt
    15721 agaatttgaa aatggtgata aaggaatggc cttaaacctt gaagagtcga gtgtaggtat
    15781 tgttatactt ggaaaaggag aaggtttaaa agaaggtgct tctgtaaaaa gacttaagaa
    15841 attacttaaa gttccagtag gtgaggcttt gattggtcgt gttgtaaatg ctttaggtga
    15901 gccaattgat gctaaaggtg tgatcaatgc taatgaatat cgttttgttg aagaaaaagc
    15961 aaaaggtatt atggcgagaa aaagtgttca tgagccttta catacaggaa ttaaagctat
    16021 tgatgcgctt gtgccaattg gtcgtggtca aagagagctt atcataggtg atagacaaac
    16081 aggtaaaact actgttgctg ttgatactat tatatctcaa agaggtcaag gagttatctg
    16141 tatatatgtt gcaattggtc aaaagcaaag tacagtggca caagtggtta aaagactaga
    16201 agaacatggt gctatggaat atactattgt tgtaaatgct ggtgcttcag atcctgcggc
    16261 tttacagtac ttagctccat atactggtgt aaccatgggt gaatttttta gagacaacgc
    16321 aaaacatgct ttaattgttt atgatgattt gagcaagcat gctgtagctt atcgcgaaat
    16381 gtctttgatt ttacgtcgtc ctccaggtcg tgaagcttat ccaggcgatg ttttttacct
    16441 tcattcaaga ttgcttgaaa gagcaagcaa gctaaatgat gaattaggtg ctggttcttt
    16501 gacggcattg ccgataattg aaacacaagc aggagatgtt tctgcttata ttccaactaa
    16561 tgttatttca attacagatg gacaaatttt cttagaaact gatttattta actcaggaat
    16621 tcgtcctgca attaatgttg gtttatcagt atctcgtgta ggtggggctg ctcaaattaa
    16681 agctacaaaa caagtttcag gcacattaag acttgacctt gctcaatata gagagcttca
    16741 agcttttgca caatttgcta gtgatttaga tgaggcaagt agaaaacaac ttgaacgtgg
    16801 acaaagaatg gttgaactct taaaacaacc accttattct ccgcttagcg ttgaaaaaca
    16861 agtagtttta atttttgcag gaaccaaagg tttcttagat gatattgctg tttctagaat
    16921 taaggaattt gaagatggaa tttatccttt tattgaggca aaacatccag atatttttga
    16981 gcaaattcgc tctaaaaaag ctttagattc tgatttggaa gaaaaactag ctaaagccat
    17041 taatgagttt aaagtaaatc atttataagg tcttttatgt ctaatttaaa agaaattaaa
    17101 agaaaaatta aaagtgttca taacactcaa aagactacaa atgctatgaa gctagtttct
    17161 actgctaagt taaaaaaagc agaagaagca gctaaaagat caaaaattta tgcacaaaaa
    17221 atcgatgaaa ttttgagtga aatttcattt cagatcaata aaattgttca caatgaagat
    17281 gatgtgcgtt tatctttgtt tcataaaaaa gaacaaatta aaactgtaga tttaatattt
    17341 atcactgcag ataaaggctt atgcggtggt tttaatatta agactttaaa agcagtaagt
    17401 gaaatgctaa aagaatatga agcaaaaaat attaatattc gtcttagagc tataggtaaa
    17461 actgggattg aatattttaa ttttcaaaaa atagaattgt tagagaaata tttccatctt
    17521 agttctagtc ctgactatga gaaagcatgt gaagtaattc atgctgctgt agatgatttt
    17581 ttaaatggaa atacagatga agtgatttta gttcataatg gttataaaaa tatgattacc
    17641 caagaactta aaattaatca tcttattcca gttgaaccaa agagtattga acagactcat
    17701 aattctcttt tagagcttga accagaagga actgagcttt tagaagattt aatgaaaaca
    17761 tatttcgagt ataatatgta ttatgcatta atcgattctt tggcggcaga gcatagtgca
    17821 agaatgcaag ctatggataa tgcaactaat aacgcaaagg caagagtgaa acaactaaat
    17881 ttagcttata ataaagcaag acaagaatcc attactactg agcttataga aattatcagt
    17941 ggtgttgaat caatgaaata gtaaatttta aggagaagat aaataatgca aggatttatt
    18001 tcacaggtat taggtccggt tgttgatgta gattttaacg actatttacc tcaaattaat
    18061 gaagcaattg ttgtaaattt tgaaagcgaa ggaaaaaaac ataaacttgt tttagaagta
    18121 gcagctcatt taggagataa tagagttaga actattgcta tggatatgac agatggtttg
    18181 gtaaggggct taaaagctga ggctttaggt gctcctatta gtgttcctgt tggtgagaaa
    18241 gttttaggaa gaattttcaa tgttactgga gatttgatcg atgaaggtga agaaatttct
    18301 tttgataaaa aatgggcaat tcatagagat ccgccagctt ttgaagatca aagcacaaaa
    18361 agtgagattt ttgaaacagg gattaaagtt gtggatttac ttgctcctta tgcaaaaggt
    18421 ggtaaagtag gtctttttgg tggtgcaggt gttggtaaaa ctgttattat tatggagctt
    18481 attcacaatg ttgcatttaa gcatagtggc tattctgtat ttgcaggtgt gggtgagaga
    18541 actcgtgaag gaaatgacct ttataatgaa atgaaagaaa gcaatgtttt agacaaagtt
    18601 gctctatgtt atggacaaat gaatgaacca ccaggggcaa gaaatcgtat tgctttaaca
    18661 ggtttaacaa tggctgagta ttttagagat gaaatgggtc ttgatgtgct tatgtttatt
    18721 gataatatct ttagattttc acaatcaggt tctgaaatgt cagcactttt aggaagaatt
    18781 ccatcagctg tgggttatca accaacctta gcaagtgaaa tgggtaaatt ccaagaaaga
    18841 attacttcaa ctaaaaaagg ctcaatcact tcagttcaag ctgtttacgt tccagctgat
    18901 gacttaaccg acccagctcc agcaactgtt tttgctcact tagatgctac aacggtttta
    18961 aatagagcta ttgctgaaaa gggtatttat cctgcagttg acccacttga ctcaacttca
    19021 agaatgcttg acccaaatat cattggagaa gaacattata aagttgctcg tggtgttcaa
    19081 tcagtgcttc aaaaatacaa agatttacaa gatatcatcg ccattttagg tatggatgag
    19141 cttagcgaag aggataaact tgtagttgaa agagcaagaa agattgaaaa attcttatca
    19201 caaccatttt tcgttgcaga agttttcaca ggtagcccag gaaaatatat aagccttgaa
    19261 gatacaatag caggatttaa gggaatttta gaaggtaaat atgatcattt accagaaaat
    19321 gctttctata tggttggaaa tatagatgaa gctattgcaa aagcggataa attaaaaggt
    19381 taatttatga acgatttgat taatttcgag atagttacgc ctttgggtgt aatctatcaa
    19441 ggagaagtaa aatctgttac tttaccaggt agcgagggag aatttggcgt acttaaagga
    19501 cacgctactt tggtttcttc tttaaaatct ggagtaattg atattgaaaa agctgattta
    19561 aatcatgaat taattgctat tgatgctgga catgcaaagg tagatgaaga taagatttgc
    19621 gtgttagcaa agggtgcggt ttgggtttgt ggaagtgatg aaagtgagat tgaaaaaaat
    19681 cttgctcaag caaaagattt gattaaatct atgagttctg ataatgcagc tttagcagca
    19741 actttttcaa aacttgataa tgcaaggatg cattaatgaa ttttgaagct atatttcatt
    19801 ttttcaatag ttcaagtatt attacttata tagttttatt atggctttct ttatatttta
    19861 ttttagcatt tagtattttg tttgctagat tgacttattt ggctacatgg agaaataaag
    19921 aaaaagaaag tttagaaact ttgctcttgg gtgagaagga tttaagtcgt actgattcga
    19981 ttttaagaaa atgcaatgat acaacttcaa atcatttaga aatctataaa aatttagcaa
    20041 gtcgccgcgc ttctgctgga cttacttggc ttagtattat tgcttcaact tcacctttta
    20101 taggtctttt tgggacagtt atttctatac ttgaaacttt tggtgggctt ggaactcaaa
    20161 attctttaag tatcatagct cctaaaatca gtgaggcttt agttgctaca ggttgtggta
    20221 ttttagtagc aattcctgct tatacatttc atctcatcat taaaagaaaa gctttcgaac
    20281 ttttaagcat tattgatagc gagattaaag ttataagttc gagtaaataa ggttaaaaat
    20341 gccatttgat gatgaaaaac ctgagcttaa tatcacacct ttagtagata ttatgcttgt
    20401 attgcttgcg attttaatgg taacagctcc aagcattact tatgaagaaa aaattaatct
    20461 tccacaaggt agtcaaaaaa atactagcgc tccaactgtt aagagtttaa ttattagtat
    20521 taatgcaaaa aaagaaattt ttttaaatca agaaaaatac gattttataa gttttgctga
    20581 caatcttgct caaagaaaag cacaatttaa taccgaagat ccggttttta tacgcgctga
    20641 taaaagctta aaatatgacg atgttatttc agtcttaaga agtgtaaaaa atttaggatt
    20701 taataaagtt gctttacaga ctgaataatc atgaaaaatt atggtttgag taatttaaat
    20761 tcgtttttac ttgctttagc aatatatatt agtatagtaa ttcttgtttt ttttagactt
    20821 gtaagcgagg ttgaacctgc tatacaatat actgatataa aagatagttt tgtagatatt
    20881 gaacttgctg aaccatcaaa acaagttatt actcagagca acactcctaa agaaatacaa
    20941 aaaccaacag agcaaattga tatagaaaag ctttttgctc agactacaaa taaaacagtt
    21001 aaaaccgaag atattgacca aaaggcaagt aattttaatg agctttttgg aaatatcaaa
    21061 gaaatacaag aagaaaagac tacaaaaatt caatcaagtg ctaaatcagg agcttctagt
    21121 gccccaaaac ctcaagcttc cgaacttgta aaacaactta atgatagttt acttcaagaa
    21181 gaaagttcaa cgcaaggcga aagcacaaag gcgcaaaaga ttggaattta tgatgaattt
    21241 ttagggaaag ttgtgcgtat tatcactcaa agatggactc agtattatcc aaatagtgaa
    21301 aaaatttctg ttaaggtaaa aatttttatt gatgaaaatg gaaaatttgg ctatacttca
    21361 gttgaaaaaa gtgggaatcc tttatatgat gctaaagtgg ctgaattttt agaaagtcaa
    21421 aaaggtaaat ttattactta tcctccgcaa aataaaaata taagcattac catgaattta
    21481 agagatgaag caaaagttaa aaatgattag gagaaaaaaa tgaaaaaaat tgtagcaatt
    21541 tttttagtct ttttaggaag tctttgggca gaagatccag tgattgatgt tgttaattct
    21601 ggtgtagttt taccaaagat tattgttaaa gataattcaa atttaagcga tgagaattta
    21661 aagaaaagct tttataatat cattgtgaac gatttgaaag taagttcaaa ttttgaagtt
    21721 gttgctaatg caactgagac aagtaattat acttttgaat acgctttaaa taaaaatggt
    21781 aacactttga gtttaaatgt aaaaataaaa gctggcggtt ctgataagtc agagcaaact
    21841 tatactttaa atggtttaga gcaatatcca tttttggcac ataaaagcgt caaagcttct
    21901 gtaaatgcgt taggacttgc acctgttgat tggatggatc ataaaatttt gatcgcgaga
    21961 aattctagct ctaaaaaaag tcaaattatt atggctgatt atactttaac ttatcaaaaa
    22021 gttattgttg atggtgggct taatttattt ccaaaatggg gaaataaaga acaaactcta
    22081 ttttattata cagcttatga tcatgataag ctaactttat accgttatga tttaaatacc
    22141 aataaagcta gtaaaatttt atcaagtggc ggtatggttg tagcaagtga tgtgagtgta
    22201 gatggaagta aactacttgt taccatggct ccaaaagatc agcctgatgt ttatttatat
    22261 gacttaaata ccaaaaatct aacacaatta actaattatt ctggtattga tgttaatgga
    22321 aattttattg gctcagatga tagtaaagtg gtatttgtaa gcgatcgttt gggatatcct
    22381 aatattttta tgcaagattt aaatagtaat agtgctgaac aagttgtttt tcatggtaga
    22441 aacaattcgg ctgtttcgac ttataaagat tttttggttt attcaagtcg tgaaccaaat
    22501 caagcaagtg tttttaatat ttatttgatg tcaattaata gtgattatat tcgtcaactt
    22561 acagcaaatg gaaaaaattt atttccaaga ttttctagtg atggtggaag tatagtattt
    22621 atcaaatatt taggtgcgca aagtgcttta ggtgttattc gtgtaaatgc aaataagact
    22681 ttttattttc ctcttagggt tggaaaaatt caatcaattg attggtaaaa atttcaattt
    22741 taggttaaaa ttaattaaaa attagatata atagtaagaa tttattaact ttgaaaggtc
    22801 ataaatgaaa aaaattcttt ttacttcaat tgcagctctt gcagttgtta ttagtggttg
    22861 tagcacaaaa agcactagcg taagcggtga tagtagtgtt gattcaaatc gtggttcagg
    22921 tggaagtgat ggttgggata ttgattcaaa aatttctcaa cttaatgata ctttaaataa
    22981 agtatatttt gattttgata aattcaacat tcgtcctgat atgcaaaatg ttgtaagcac
    23041 gaatgctaat atctttaaca ctgaagtaag cggtgtaagt attactgttg aaggaaactg
    23101 cgatgagtgg ggaactgatg aatataacca agctctaggt ttaaaaagag caaaagctgt
    23161 aaaagaagct ttaatcgcta aaggtgtaaa tgctgataga attgctgtta aaagctatgg
    23221 agaaacaaat cctgtgtgca ctgaaaaaac taaagcttgc gatgcgcaaa acagacgtgc
    23281 tgaatttaaa ttatcaagat aattaatgaa aaaaatattc acagtagctc ttcttggagc
    23341 tactttactt tatgcagaaa gctcagcttt tggtgcagga gatataacaa gcaattcttc
    23401 ttatggttta acttcaaatg aaaaattatt taaagaaaag ttagataatt taaataatga
    23461 aaatatacaa acaaatgcta gaattaatga aattaacgaa agaatcgagg gtttacaaag
    23521 tactttagaa ggtataaatt ctcaatatgc taaatcaaat tctagattaa gtcaagttga
    23581 agagaataat caaaatattg aaaataattt tactagtgaa attcaaaaat taaaagctta
    23641 tgttgaagaa agtagaaaaa ttcaagaagc taataataag caagtaaaaa aagttttagc
    23701 cgaacttagt tctttagtag atgctattaa tgcaaattat gtttctaaaa acgaattaaa
    23761 tgatgcaaat ttaagcgtta aaactattac acctagtgtt gttgtttcaa ctacagattc
    23821 aaatagtacc attgaaaaca ataatactca aaatacccaa gatgataaag caaaacaaat
    23881 tgatgaatct tggaaaaaga aaaaaaataa tgaaatttta gaattagcga taaaagatgt
    23941 tgataaaaat gcttttgaag attccaaagc aaaattaaat tttctcataa caaagcagta
    24001 taaacctgca agagcaaatt tttggttagg ggagatcgag tataaacaaa aaaattataa
    24061 caatgctatt gtttattata aaaaaagttc ttctttgagt acaaaagggg attatttccc
    24121 aaaactttta tatcatactg ccatttcatt ggataaaaca ggtgatacaa aaacagcaaa
    24181 tggtttttat aaagctttaa aaactaatta tccaaattca cccgaagcaa aagcttcacc
    24241 taatagaaaa taaattaagg agataaaatg gctatagaaa aaaatagtgt agtttcaatg
    24301 ttttatgagt taaaagacgc aaatacaaat gaagttttag aatcaaattt atactctcaa
    24361 cctatttctt ttattttagg caaaggtcag attttagaaa gcttagaaga agaagtgatg
    24421 aagcttgatt gccctagtaa tgctgatgtg gtaattaaaa aagaaaaagg tttaggcgaa
    24481 tacgatgaaa atgccgttca aactttacca aaagagcaat ttgcaggtat tgatttaaag
    24541 gtaggtatgg agctttttgg cgaaggtgaa aatggcgaaa ctgttcgtgt aactgtaaaa
    24601 gaaattagtg aaaatgatgt gacaattgat tataatcacc cttatgcggg tcgtgattta
    24661 cttttttctt taaatatcgt agatgctaga gctgcaagtg aagatgaaat tcttacaggt
    24721 attattgcag gaagtcatag ttgtggttgt ggaagcggac atggacacga tcatcatcac
    24781 ggacacggtg gcggcggttg ctgtggtggc ggcggttgcg gttgtcatta atgaagactg
    24841 cgttcatatt tccaggtcaa ggctcacaaa gtcttggcat gggaaaagat ttttatgaaa
    24901 actctataaa agccaaagaa ctccttcaaa acgcaagtga tttttgtaag attgatttta
    24961 aacatttgct ttttgaagaa aacgaaaaac tcaatcaaag tgaatttact caacccgcca
    25021 tcgttttaaa ttccttaatg gcttatagtg ttttacttga aaaaaaacct gatttaagtt
    25081 cgaaatttgc tttagggcat tctttgggag aattttcagc cttagctgtc aatggtgctt
    25141 ttgatttttt agaggctctt tctttggtca ataaaagagg gctttttatg caagaagatt
    25201 gtgtaaaagt tgaagcgggt atgatggttg ttttagggct tgatgatgaa aaggttgaag
    25261 agctttgtca aaaagcacaa aaagaaaaca agcaaatttt cgctgcaaat tataactgcg
    25321 atggacaaat cgttgtagca ggtttaaaac ctgatttagc aagttatgaa agtgtattta
    25381 aagaagcagg agctaaaaga gctatgcttt taaatatgag cgtggcaagt cattgtcctc
    25441 ttttggaaaa tgcttcagct aagctttgtg tggagcttga aaaggtgtta aaaccaaatt
    25501 ttaaagccgt aatttctaat gcaaatgcca aaatttatac aagcaaagaa gaagcccttg
    25561 aacttttaaa agcacaactt atctctcctg tgctttataa acaaagcatt aaggcatgtg
    25621 aaaatgaagt agattatttc atagaatttg gtgcaagcgt gcttaagggt ttgaataaaa
    25681 aaatcacttc aaaagaaact tatgctttaa caaatatgaa tgatattgat gaatttttaa
    25741 aggttatatg atgaaaatag caattttagg agccatgagt gaagaaatca ctcctttgct
    25801 tgaaacactt aaagattata caaaaataga acacgctaat aatacttatt attttgcaaa
    25861 gtataaaaat catgaacttg ttttagcgta ttctaaaatc ggaaaggtaa attctactct
    25921 tagtgctagt gtgatgatag aaaaatttgg cgcacaagct ttgcttttta caggagttgc
    25981 gggtgctttt aatcctgaac ttgaaattgg cgatttgctt tacgcaacaa aattagctca
    26041 atacgatctt gatattaccg cttttggaca tcctttaggt tttgttccag gtaatgaaat
    26101 ttttatcaaa accgatgaga aattaaacaa tcttgcttta gaagttgcta aggaattaaa
    26161 tatcaaactg cgtgcaggta ttattgcaac gggtgatgag tttatttgtg atgaagcaaa
    26221 aaaagcaaaa attagagaaa ttttcaatgc ggatgcttgt gaaatggaag gcgcaagcgt
    26281 ggctttggtt tgtgatgctt taaaggtgcc ttgttttatc ttaagagcta tgagtgataa
    26341 agcaggggaa aaggctgaat ttgattttga tgagtttgtg atcaattcag ctaaaatttc
    26401 agccaatttt gtgcttaaaa tgtgcgagaa attatgataa atcttagcaa aaaactcata
    26461 cgccaagttg cacaagctaa tgctaaattt ggacttatta aagatggaga tagggttctt
    26521 ttagggctta gcggcgggaa agattctttg gctttagccc atcttttaaa tcgtatgcaa
    26581 gctcatgctc cttttaaatt tgaacttgaa gcggtaactt tgagttatgg catgggcgag
    26641 gattattctc atcttcatgc acattgtgaa gaacacggca ttaaacatag cgtgcttgat
    26701 tcaaatattt atgaagtttc aggtgatacc ataagagaaa attcaagttt ttgtagttat
    26761 ttttcgagaa tgcgtcgtgg agctttatat acttacgctc ttgaaaaagg ttttaacaag
    26821 cttgctatag cccatcattt agatgatgca gcagaaagct tttttatgaa ttttattcat
    26881 aatggagctt taagaacctt agcgcctatt tatcaaagca aacgcggtgt aattgtgata
    26941 cgccctttga tttttgtgcg agaaagacag cttagggata atgctacgca aaatgaactt
    27001 agcgtgatag gaaatgaatt ttgtcctggt atgaaactca gcgaaaaaaa tgtaaaattc
    27061 ccccacgcta gagaagaagc taaacagctt ttagcaaatt tagaaaaaga tcatcctaag
    27121 ctttttacaa gtttaaaaac cgcttttgcc aatttacaca cggagagttt ttggcttcaa
    27181 aaggcataaa agcatgaaaa aagcttttgt tttagtggat tatcaaaatg attttattga
    27241 tggaagttta ggttttgata aggctttaaa aatcaaagaa aatattctta aagccttaaa
    27301 tcaaatcgat tttaataaca cgcatttgct tttaacctat gatacgcatg atgagcatta
    27361 tctacaaagt aaagaaggtt taaatttacc tgtaaaacat tgtattaaag agagtttggg
    27421 ttggcaaatg ccaaaggaat ttgaaccttt tttacaaaaa gctcataaaa ttttttataa
    27481 aaatactttt ggtagcttag aactagctaa tttcatacaa aaaagcgatt atgaagaact
    27541 tcattttgca gggcttgttt ctcatatttg tgtgttttgt aatatcattt tagcttttgg
    27601 tgctaagcct aatgcaagga taattttaca ccaaaattta agtgcaagtt ttgatgaaaa
    27661 tttagaaaaa tccgcttttg atatacttag ggcttatggt attgaaattg tttaatgcaa
    27721 ggctttatac ttcatactca aaaagttaaa gatgaggatt tgatcgttta tattttaagt
    27781 cctaaaatgc ttattaaggc ttatcgtttt tatggactta gacattctag tattttaagt
    27841 ggctataaaa tcgactttgc tttagaagaa aatcctagtt ttttaccaag acttaaagat
    27901 gtattgcatt tgggattttt atggattatg caaagggata aaatgcttat ttggcaagaa
    27961 tttatccgtc ttttatatag acacttaaaa gatgtggaag agcttgatag tttttatttt
    28021 gatttacttg atgagtgtgt gaaaaggttt gaaaaacaaa atccaaagcg tgttattgtt
    28081 gatgcttatt taaaaatttt ggaatttgaa ggaagattgc ataaagattt tttttgtttc
    28141 gcctgtgatg agaaaattca aaatcccatt acattactaa gggctttttt accttcgcat
    28201 tctcaatgtg ctttaggatt tgagtttgaa gagaaaaaac taaaacaatt ttatagcagt
    28261 aaaaattgtg cgatttttga tgatgaagaa atagaaaatt tatatcattt gattaaggaa
    28321 ggtttatgat attaagtgat gaaaaatgtg attttttaga atctatagca agttttttaa
    28381 gtcctaaaga tgtggagctt gtctttgtgg atagtaaaga aatgcaagaa attaacttag
    28441 agcaaagaaa acaagataaa accactgatg tgctttcttt tccgcttgaa aatatcgatg
    28501 agagtttgcc tttgggttct gttgtgatca atgtggattt ggcaaaagag aaggctaaag
    28561 agttagggca tagctatgaa gaagaaataa gcttgctttt tatccacgct atgcttcatt
    28621 tactaggttt tgatcatgaa aatgataatg gagaaatgag agaaaaagag aaagaactta
    28681 tagagtgttt taatttgcct aaaagtttga ttgtaaggac tttggaaatt aagtaagatt
    28741 tttttcaaga gctagaagac ttgcgcttta tattttaaat atatgagtaa aaatattaaa
    28801 aaaaatcatt tttgccgatt tatcttaata aatttcattt acaaggaagg caaaaatgat
    28861 taatggtata aattcttatt caaactacaa ttacacaaat acttttagta atactacttc
    28921 aaatacaaaa tcatctaatg ccatagcaaa taataacctt gtaagtgata aatcacaagc
    28981 ggtagataaa attttaggct atggcgtaga taaagagggc ttttttacaa gtgattttaa
    29041 cgaagcagca ggtttgccaa aagattataa gatttatgca gatggtttaa ataattttgt
    29101 aaataacttt attaaaagac aaccttttta ctctcaaata gacattgcta aaacaatagg
    29161 aaatgcttat aactcttttt cttcttttgt taaagataag ggattaggag aaagctttca
    29221 agaacaggat ttaaaaaatc tatcccaaaa agatggggta aattattggc aagaattaca
    29281 aagcgataat gctttcattt ggaagcttac tgatgaaaat atagcagatt tgggttctaa
    29341 taaatatcaa atacatgata acaaaatatc taaaggtggt gctttaattg cgttttttat
    29401 aaataatctt agcacaatta aaggacaaac aaccttactg ggtaaattag ctggacttaa
    29461 tagcgatacg gacaacaatg aaataaaaga atttttgtcc tttatgaata aaaatccttt
    29521 aaaatattcc tacgagcaag atggctgggg caatcctatg ggagatagtt tatcaatatg
    29581 gaattatata aatagagcta aaaatttagg agatgataaa ctaataaaaa ctattaagaa
    29641 tttaggagat gaatacaata agcttattaa ttctaatatg agcctagaag aatttaaaac
    29701 caaatatctt gattttaaac aaagacacga tgagtttgta aaatcactag aagaagcaga
    29761 aaaggcaaaa ggtgtagatt atagcaatcc tttaaaaaat acaaataaca aagaaacttc
    29821 agaagaaggc aaagaaaagc cttttaaacc tatacaagca gaaagtaaaa acaaagaaac
    29881 ttacaaagat gataatacaa gaagcgaact tgtaaaaaaa ttattaaaag ataaatttag
    29941 cactagtaaa gaattagaac ttctttttgg tatgaaattt agtgatgatg atgcaggaga
    30001 atttaataaa atcctttctt taaattctac accaaaaagt atagatatta aggcttaagg
    30061 ttttttaaat tataaaaatc aatcaagtta aactaaaaaa ttcttctatt ttttttcgca
    30121 ttttttctgt attgtcgata cgattgactt catctctaaa ggctgaagcg tctttatagc
    30181 ctttagaata ctcgtgtaaa tgcttgcgaa atatacttac gccttgatct ttgtagtgtt
    30241 ttatcatttc atcaaaatga gtgagtatga tttctttttt gagtttttca tctacgcttt
    30301 taccgctttt gatttcataa aatatccaag gatttcccac gcttgcacgc cctatcatga
    30361 gtccatcgca ttttgtgatt tcataaactt ctttagcgtt ttgtgcgtta atatcaccat
    30421 ttgcaatcac aggaattttc acgctctctt tagcactggc aatggattca taatcggctt
    30481 ttccgctata aagctgtttt cttgtgcgtc cgtggatgct tacaaaatcc acccccaagc
    30541 tttcacaaat tttagccatt ttttcaggat atttttcatt aaatcctagt cgaaatttca
    30601 cacttgtaag gcttttttta ttgttttctt taattactcc tacaagattt ttaaaaagct
    30661 ctaaattttc tagcaaagca ctaccagcgc attgtttaac aactttattt acagggcaac
    30721 cgcaattaaa atcaatccca tctacaaaat ccatttcatt tagcatttgc actgcttttt
    30781 ttagcacttc tttatctcca cctgcaattt ggactatata aggattttct aattcagctc
    30841 tttctagcat atgtagagtt ttagaacttt cataaactaa ggcattagaa cttatcattt
    30901 cgcttatggt aatatcagca ccaaattttt ttactacatt acgaaaaggc agatctgaaa
    30961 aacctgccat aggagctaaa aataaaggtt ttttgctaaa atctatcatt gtatgagttg
    31021 gtttagattg attttgatat ttttttcacg caaggctaaa aaggccttaa aatcattaaa
    31081 tttcttatca tcattgtgaa tttgctctct taactcatct aaaagtccaa attcagctaa
    31141 aagatataaa tgtgctctta aagcttcgct tttttcattt ttaattttgt taaaaattcc
    31201 taaaatagca tcaggattta aaagtttagt acttagtttt gctgcgttaa gatagtcttt
    31261 ttcgcttagt atattgtgtg aaagtaaaac ttcgtattct gctgcactaa gttctaaatt
    31321 tccttcttta aaacgcttga taagtgtgag aacttcagaa ggctttttag ggatttttac
    31381 atttttaatt tgttcataac tagctttttc tataagagta ttaaaagcaa tttcttcaaa
    31441 ttcatctttg atttcattaa ggtttttaag tttgctatag gcataatttg catcgttttt
    31501 gagatgattt ttttcatttt gcaaatataa aacattgtta ttttcgagtt taaatttact
    31561 aaggttaaaa aattcgtttt tatttaaacc atcaataaga tctaaaattt cattgatttt
    31621 atttgagtgt ggaatttttt catgtgtttt tagggtttta aaaagttgtg ccacagctct
    31681 aaattctttt gtttgaaaag tggttttaag atctttttca aggagcaaat cttgagtata
    31741 agcttcaaat ttagctgcat ctttaaaaaa atgcttaaat tttaaataac gcaaaaatcc
    31801 ataaaatgct atgtgcaaaa cggctaaaat catataaaca aataaaggaa taacaagcca
    31861 tatcataata ggtagttcaa aggtataagt actgatattt agagtatagc ttcctagttc
    31921 tagatgccaa gcaaaggcaa aaataagtgc tatataaata aaacttgcaa gtaaaaagag
    31981 tttaattttc atgttttttt ccttgttctg caatttgacg gcaagtgata caatatcttg
    32041 cgtgaggttt gacttttagt ctttgagagt cgatttcatc atcgcaagat tcgcaaattc
    32101 cataagtgcc gtttttgatt ttatctaaag aattttcgat ttctataagt tcttctttga
    32161 gattggtgct gatagtaaag tcaatttgag agcctgtttc tatgatagaa aaatctacac
    32221 tatcgcttgg gacgctattg tgaagagctt cgatttcatt tgaattgctt tgcaaatttt
    32281 ctaagatggt tttttttctt tcttctaaaa tatttttgaa attttgtatt tcattttttt
    32341 tcattttaaa actttctatt tgtgataagg gtgattgttg ttgatgcaaa atgcacgata
    32401 aatttgttct aaaagtaagg ttttaacaaa ttgatgtgct aaagtaagtt tgcttaatga
    32461 tagtctaaaa tccaaacttt gattaaattc ttctcttaaa ccataagcac cacctataaa
    32521 aaaacttaat tcatttttat cttggatgag ttttgcaaat tctatacttg taagttcttt
    32581 ccctttttca tcaagagcga tacaatagcc ttttttataa ggcataaaag cttcttcata
    32641 gctttttttt gcttctatgg catttaaatt ttgagctaag gctatttttt tattaaaaac
    32701 atttatttct tttaaagtgg cgtatttaga aataagttta gagtatttct cactccaagt
    32761 tttaaattca tcactttttt gaatacaaaa gatattaact tgcaaattat tttccactga
    32821 aaaattttag cacatcgcta agatattgtt tttgttctcc tctttcaact atggcatcta
    32881 taagtccatg ttctaacaag aactctgctt tttgaaagcc ttcaggtaaa tctgctccta
    32941 tagtttgttt aataactctt gcaccagcaa aaccgactaa agcttcaggt tcagcgatga
    33001 ttaaatctcc aagccaagca aaagaagcac ttactccgcc catagtagga tcagttaaaa
    33061 tgctaatata aggaagtttt tctttgctaa gaagtttaag tgcggcgcta gttttgctca
    33121 tttgcatcaa agaataagta ctttcttgca ttctagctcc accgcttgca cttacgatga
    33181 caagaggggt tttgcttgtg atggctcttt gtacagctct aacgattttt tctccttcaa
    33241 cagaacctaa agatccgccc ataaaagaaa aatcaaatac aacaagttgg gtttttaaac
    33301 cattgatttc acattctcca ctaataacag aactttttct acctgtttta ctttcacctt
    33361 cgctaaggcg ttttttatag gatttactat caacaaattt taaaggatct atagcctcta
    33421 aatttgcatc atactcaata aaactgcctt catcgcttaa aagtttaata cgttcatcag
    33481 ctgaaattct catgtgataa ttacatttag ggcaaacatt aaaacaagat tctatttctt
    33541 tataatacat caaagcatga caactttggc attttaccca gtgatttgga gcttctttaa
    33601 cgctaggttg ttgtcttctt atttttgaaa aaatatctgc aaaattcata tattcaccta
    33661 attatttttt aaaaattcta agattatatc aaaaattttc ttgtcttggc ttaggagaag
    33721 gaaattttca tttttttcta tatataaatt ttgatgaatt gttaaagcag ctactgtatc
    33781 aaaaattcgt gtttttccaa gaattaatac aaaactaaaa tacgaagcat aagcgagact
    33841 taaggctgtt gcgcccaaag agcgaaattt taattgattt tttgttaaaa aatcgagaag
    33901 ttctggataa agtgaaattt tttcaactat acctatttta gaaaatagat taggtgttaa
    33961 gggtgagtat tttggatcgg aaagattaga tttaaaagat tgattgttat taaaagcaaa
    34021 aatttcttga ctgacaagat tgcaaacaaa agcgcttttt gcctgatctt tttctatgag
    34081 agctatagaa gttccataaa atggtatttt agaaacaaaa tttgaacttc catccaaagg
    34141 atcaagaatc atttgttttg ggttatcttt cccgatcaag ccactttctt cagaaaaaat
    34201 ttgcccaaaa caactaagat attttatgaa aatttgttca cattttaagt caagctcata
    34261 gccttgattt tcatcatagc ctaatttaga gcaaagttta agatcatttt gtgggatatt
    34321 gtttagatac ttgcgtattt gcaaatttgc attcaagcaa gcatctaaaa attctttcat
    34381 taaaagcgtg ttccaagatt aaattcaaaa ctattagtat catcaccttt tttatcatta
    34441 agaggtttgg caaatacaag ctgtaaaggt ccaattggtg taatccattc aatgcctata
    34501 cctgtactca ttctttttat ttcatctaaa tttttacgcc ctatcatacc ataatcaaaa
    34561 aacacgctac cacgaagttt gattctatca atcaaaggga agctaagttc tacggaattg
    34621 gcaaaagcta tggttccacc tacttcatct ccccattggt ttttaggact taccgttctg
    34681 ctttcaaaac cgcgtatcga tctaatacca cctaaataaa ttctttgatt aattggcaaa
    34741 tagccttcat cccatacttt ataaaaactc gctttatagc gataaataag atcatatcct
    34801 atatagtctt gcaaaccttg ataaaagtta aatttagagc ttgatgaaat aaattcttga
    34861 tctccgccaa gtccagcgta ttctaaacta gttgaagcaa tgatacctga tcgtggcaga
    34921 taataatcat ctgtattgtt aaaggtgatt gctggagtta tagagctttt aatacttttg
    34981 ccaagttcat atcctgttct taaaagagtt ggacttaagt gatatatatc gctttgttca
    35041 agattataag ttaagcttac attatagtat cttgcaaatt ggcgtccaac tgttatatca
    35101 aagccgtaat ttttttctga ataattatcc cattcatagt catttgaata aagtgttcca
    35161 cccagactat attgactatc aagaacgcgt ggatttatga gactaatcct tcctgataag
    35221 gtatcatcgc ttttatctac gcttacagag ctttttattc ctgaaccaaa gatatttgta
    35281 tctgataaag aagcattaag taaaatacca tcgcttgatc catagccaat acctccagaa
    35341 atagctcctg tagaagcttc tttaacatca acaatcaaat caatatgtgt atcatcaact
    35401 ttttcttctt taatatttac atcgtcaaaa taagaagttc tttttaaagc attttttgac
    35461 tcgcttaagt ctgttctatt gtataaatta ccttctgtta tatataattc tcggcgtatg
    35521 acgcgatcta cagtacgtga atttcctgaa ataataacat ttcttatata aactttatca
    35581 tgagggatta ctttaaatac aacggtggct tcttgagttt gatcattttt ttgaatatca
    35641 ggatagactt ctacaaacgc atagcctaaa tcagcacttt gtgtttctat ggttttaaca
    35701 tcttttctaa tgtcttcgat attgatagtt ttgccagcac ttgatcttaa atcttttacg
    35761 gtttgtgcat tttgtttatc atcaaataaa ggattttcta tgcttatact tttaatttta
    35821 taaggctttc cttctttgat aaaataagtc aaatttgctt gataagtatc tgtgtaggtt
    35881 ttaagataag gcgaggatac ttgaacatct aaatatcctt ttttcatata ttcatcagca
    35941 attcttgaac tatcgttact aagttcaaaa acttttaatt ttccatcatt gcgtccccac
    36001 atccatccca taaattcttt ttctttgtta acaacagcag gttctatatc agaatatgaa
    36061 aatttcttgg ctccacttaa atgaacatta tcaataatga tattttcgcc acgatttact
    36121 ataaattcaa gctctagtcc atcggtattt tctaaagtct tttttttgta ttctacaata
    36181 gtatcaaaat aactttttgc ttcataataa gctttaatgc gttcaatagc ttcttttata
    36241 cttccttcat caagtagtgt gcctctttta atccctaaaa tactttcaac ttgttttcta
    36301 tcatttgaag ctatacctgt gatagtaacc tttgctatag ttggtttttc ggtaactata
    36361 atttccaaaa ttctattgtt gttttctact gcaatatttt cgaaataatt ttgtttataa
    36421 agattaagaa tagcagtgtt gatttttgca ggatttattt cctcgcctat tttaagcccc
    36481 gtgatattta tagcgcttgt gttcgataaa tgatttaatc cgataaattt aatatcttta
    36541 atggttgctg cattggctat agcaactaaa gcacaaatac taataagatg ttttttcatt
    36601 gattttttac ctaaagcttt attaaaagct gtataatagc aaaaaaaatt taacaaaaaa
    36661 actaaggtag aaagtatgaa aatagcaatt atagggcttg ggcttatggg tggatcttta
    36721 gggctttgtt tgaaagaaaa taagcttatt tcttgtgttt atggtatgga tttaagtaaa
    36781 gaaaatgaaa aagatgccct gcgattaggt cttattcatg agcttataga atttaaagat
    36841 ttagctttat gtgatatgat ttttgtcgca actcctgtta atgctattat agaaattttg
    36901 caaaagttag ttgatttgcc ttctaatgta acaattatag agcttggaag tacaaaaaga
    36961 aaaattatag aaagtttgcc taagaattta atcaaacaaa ctctttttgc tcatcctatg
    37021 acaggaactg aaaattcagg tccaaaagca gcttttaaag agctttataa agatgcagtt
    37081 tgtgttcttt gcgatagtga aatagctgat gatttgcatc aaaaaagagc ggtagaaatt
    37141 ttttctcatt tagggatgaa aattgttttt atggatagta aagcccatga tcatcatgct
    37201 gctatcattt cacatttgcc tcatgttata agtttttctt tggcaaattt tgtaatgaaa
    37261 gaagaagata aaagaaatat tgttcattta gctggaggat cttttaaagg tatgagcaga
    37321 attgccaaat catcgccaca aatgtgggaa agtatttttt tacaaaataa agataactta
    37381 ttaagttcta ttgatttttt tcaacaagaa ttagagagat gtaaacaaat gatacaatta
    37441 gacaaaaatg atgaattaag agaatggatg aaacaagcta atactctaag agaaatttta
    37501 taaatttgct agatatttac tgaaaatata atagaattta tactaaaaac aacaaaaaca
    37561 ttgaaaattt ttaaggaagg ttatggcaaa aagaaaaggc aaaacttatt tatctgtttt
    37621 aattttagtt ttaatagtaa ttttgatttt ttttatttca agattaagta tttttgaaaa
    37681 aaatcctcct caaattttaa tgccagatgt tgtatatact gatcttaaaa aacctatttt
    37741 agtgcatgtt aaagatgatg aaagttctat caaaaatgta caaattatat tgcataaaga
    37801 cgacaatact agtgcaatgg ttatagcaga tgaaaagatt tctaatttaa aagatattac
    37861 cttacaagtt gctttgccaa aatttggtta caaagaaaat gtaaaatctt ttgttttgga
    37921 ggtgatagct aaagattcta gtttttggaa tttttttagt ggcaatgaag caagaaaaca
    37981 aattgcggta ttagtagata atacggctcc aaaaatcaat atcataagca attcttacca
    38041 aatcgagcaa ggcggtgccg gggctgttgt ttttaaggcc gatgatgcta atttagataa
    38101 ggtgtatata gaaacaaata aaggtagaat ctttaaagcc acaccttatg taaaagaagg
    38161 gtattatgcg gctttgattg cttgggatgc aagagatgag gaatttcgcg catttgttat
    38221 cgctacggat aaagtgggaa atatttcaaa agaacgtata aggtattatt ttgttaatcg
    38281 taaatatcgt gtttcaaata tcaatctaac ggataaattt ttagatggaa agattgagaa
    38341 tttagcaaat caatacgctc caaaagataa taatctcaat cgttatgaaa aatttaagtt
    38401 tgtcaatgaa actttaagaa atagcaatga agaacttatc catgaaatca cttcaaaagt
    38461 acctgaggaa aaaattgata attttgattt gaatttattt ttacctctta aaaatggtat
    38521 gaaagtagcg gattttgctg atcataggta ttattcttat aatgggcaat ttgtgagtga
    38581 ttcttatcat atggggcttg atctagcaag cgtagcacaa gctcctatca taagcaataa
    38641 cgcaggcaag gttgtttttg ctgctgaaaa tggaatttat ggtttaaatt taattgttta
    38701 tcatggtttt ggagtatata gtctttatgg gcactgttct tctaaaaatg ttgatttaga
    38761 tgaaatgatt aataaacaaa gcattatagg caaaacagga acaagtggtt tagccttagg
    38821 tgatcatttg cattttggag ttttagttca aggagttgaa acgcgtcctg aacaatggca
    38881 agataaaaaa tggatagaaa ataatattta caatgtttta aatgatggta aaaagataat
    38941 tttaggaaaa aattaatgaa acaattaact ttagcaaaaa ctgtcaaagg cgtaggtata
    39001 ggacttcata agggtgaacc catagaaatt actttagagc ctttagaagc aaatagtggt
    39061 atagtatttt ttagaagcga tcttaatgca agctataagg caagtcctga aaatgtgatc
    39121 aatactcaaa tggcaactgt tttaggagac gatcgtggat ttatttctac aatagagcat
    39181 ttaatgagtg cgattaatgc ttatggaatc gataatgtac gcatagtttt aaatgcaaat
    39241 gaagctcctg ttatggatgg atcaagtatt agtttttgta tgatgcttga tgaagcaggg
    39301 gtaaaagaac ttgatgcacc taaaaaaatt atggtaatta aaaagcctat agaagtaaga
    39361 gatggtaata aatttgtgcg tttaactcct actaaagaac cccgtattaa ttacacaatt
    39421 aaatttgaca atgctgttat aggtgaacaa agttacaatt ttgaattcag caaaaaaaat
    39481 tatatagaaa acatagcaag ggctagaact tttggttttt taaaagatgt tcaagctctt
    39541 aggagtatga atttagcact aggtggaagt ttagaaaata ctatagtggt agatgaaaat
    39601 cgtattttaa atcctgaggg tttgcgtttc aaagatgagt ttgtaagaca taaaatttta
    39661 gatgcaattg gagatttaac cttacttgga tatcgtgttt ttggggatta tatttcatat
    39721 gctgggagtc atcatttaaa tcatttactt actaaagaag ttttaaaaga taaagatgct
    39781 tatgaaattg taagccttga aaaaacaacc caaaaagctt atgaaaaggt atttgcataa
    39841 aaacctctct tttgcttaat gctttatcta agcctttaat gatcggaatt tatcaagatg
    39901 ataaacttat aaaaacttat aaaagtgaag aaaaagcaag cgaattttta ccaaaaattt
    39961 tagatgaatt gcttaaagaa tatgatttta caagtttaat ctatgctaat ggtccaggtt
    40021 cttatatggg gattaaaatt tcttatgtaa gtttgagtac tttaagtata gtaaaaaata
    40081 ttcctttatt tgcggtgagt gcttttgaat taaatggcta taaacccata agtgcaaata
    40141 aaaatttttg ttttgtatat aaggaaggtg aaatttgttt agagcaaaat atcccagcag
    40201 agtttttttt accaaaaaat ttacaagagc ttaaactaaa taatgataat cttccctttt
    40261 attttttaga tgcaatttag gatgaaattt gaaaatttta gttcccgcta cgagtgcgaa
    40321 tttagggcca ggttttgatt gtttaggact tagtttaaag ctttttaatg aaactcaaat
    40381 ccaaaaatca ggtgttttta gcattagtat tggaggtgag ggcagtgata atatttttct
    40441 taaaaaaaac aacatatttg taaatatttt ttatgaaatt tatgaaaaac taagtggaaa
    40501 aaaagataat tttcgtttta tttttcaaaa taacattcct ctttcaagag gattaggaag
    40561 ctcttcagct gtgattgttg gagctattgc cagtgcttat tatatgagtg gatttaaggt
    40621 agaaaaagaa cgtattttag atgaagcttt aatttatgaa aaccatccag ataatatcgc
    40681 tccagctact cttggtggtt ttgtgtgttc tttggttgaa aaaaataaag tttatagtat
    40741 caaaaaagag attgataaag atttagctgc tgtggttgtg atcccaaatt tggcaatgag
    40801 cacggaacaa tcacgccaag ctttggccaa aaatttgagt tttaatgatg cggttttcaa
    40861 cctttctcat gcttcatttt taaccgcttg ttttttggag aaaaaatatg aatttttaaa
    40921 atttgcaagt caagataagc tccatgaaat caatcgtatg aaaaacttac ccgagctttt
    40981 tgaagtgcaa aaatttgctt tagaaaataa agctttaatg agcacacttt caggttcagg
    41041 atcgagcttt ttttctttag ctttcaaaga tgatgcttta gctttagtaa agaaaatgca
    41101 aacaaaattt aaagattttc gtgtgcaata tttagaattt gatgataatg gctttgaaat
    41161 ttgctaaaaa atataaaaaa aagatataat tttgaaaaaa catataccaa ttagaatgtg
    41221 catagtgtgt aaaaaccgct ttgagcaaaa tatgttattt agatttaaag ttgttttagg
    41281 agatattgtg cctaaagcag aacatggaag aagcgggtat ttatgtcaaa attgtattga
    41341 aaaagaagat aaaatcttgc aaaaagcatt ttctaaaata tgtaaaaatt taaatactaa
    41401 aattactcag caaggactta aggagatatt tttaaatggc aaagattaga attcatgaaa
    41461 tcgcaaaaga attaggttat gatagtaagg aaattattga aaaggcaaat gaattagggc
    41521 ttggaattaa aacagcatca aatgctgtag aacctgagat tgcggcagct atttatgagt
    41581 atatacaaac aagagaaatt ccagaagctt ttaagaaaaa tatcaaaact cctacggcaa
    41641 aaaagcctaa aaaagaaaat ataaaagaac aagaaaagct aaatgaatct gaaaaaaaag
    41701 aacctaaaaa agaagaaaag cttaaacaag aagttaaaaa agaagaatta aaagttgaaa
    41761 aagaaaatgc aaaagaagaa aaacaagaaa ttattgatgc tcataagcca caaagccttg
    41821 ctagtgcaac tttagctaaa agacgcggac ttgttattgt taaaaagaaa aaagacgaag
    41881 aagaaattca agttaaaaaa gaagaagtaa aaaattcaaa tgatatatct atcaataatg
    41941 aagagcgctt aagtttaaaa accatgtttt caaatgctga tgagagttta aagaaaaaga
    42001 aaaaagaaaa aaaatctttt gtcgcgagta aaaaagaaag taccgaaaaa atgaattttt
    42061 tagatgaaca tgattttggt gatatttctt tagatgatga agatgaggta gtgttgcctg
    42121 attttagtgt aaaagaacaa gaaaaaccac aaaatatcaa taaaaaacaa cctaatttta
    42181 taagacaagc tgttggaaat tctgcgggtt ttggacttga aggtggaatt caaagaagaa
    42241 gtcgtaaaaa accacctaaa aagattgaaa aaaaggaagt agaagaagta agtagcgttg
    42301 ctatttctaa agaaattcgt gtgtatgaat tcgctgataa gataggaaaa agcactagtg
    42361 aagtgatttc aaaacttttc atgcttggaa tgatgacgac aaaaaatgat ttcttagatg
    42421 aagatgcgat tgaaattttg gctgctgaat ttggtataga gatcaatatc attaacgagg
    42481 ctgatgagtt tgattatgta aaagactatg aagaagagat tgatgaaaaa gatttagtga
    42541 ctagagcacc tgtgattact atcatggggc atgttgatca tggtaaaact tctttgttag
    42601 attatattag aaaatcgcgc gttgcaagtg gtgaagcagg gggtattact cagcatgtgg
    42661 gtgcttatat ggtagaaaaa aatgggcgta aaattacttt tattgatact ccaggtcacg
    42721 aagcttttac tgctatgcgt gcaaggggtg caagtatcac tgatattgta atcatcgttg
    42781 tagctgcaga tgatggggta aaaccacaaa ccaaagaagc gataaatcat gctaaggcag
    42841 caggtgtgcc tattattatt gctattaaca aaatggataa agaagcagca aatcctgata
    42901 tggtaaaaac tcaactcgca gaaatggaaa tcatgccagt agaatggggc ggatcttatg
    42961 aatttgtagg ggtttcggct aaaacaggaa tggggattga agatttgctt gagatcgtgc
    43021 ttttacaagc tgatatttta gaacttaaag ccaatccaaa aagttttgct aaagcaagca
    43081 ttatagagag ttctgtgcaa aaagggcgtg gtgcggtagc tactattatc gtgcaaaatg
    43141 gaacacttac tgtaggaagt accgtggttg caggtgaggc ttatgggaaa gtgcgtgcga
    43201 tgagtgatga tcaaggtaaa gctttaaagg aaatcaaacc aggcgaatgt ggggttatcg
    43261 taggacttag tgaagtagca gatgcaggtg aaattttaat cgcagtaaaa accgataaag
    43321 aagcaagaga atacgctaat aaacgccacg aatacaatcg ccaaaaagaa cttagcaaat
    43381 ctactaaagt tagcattgat gagcttggag ctaagatcaa agaaggcaat ctaaaagcct
    43441 tgcctgttat tttaaaagct gatgtgcaag gatctttaga agccttaaaa gcaagtttag
    43501 aaaaacttag aaatgatgaa atcaaagtga atatcattca tagcggagta ggtggaatca
    43561 cgcaaagtga tatagagctt gcaagtgcga gtgaaaactc tatcgtacta ggttttaaca
    43621 tacgcccaac aggggaagtt aaagagcgtg ctaaagataa aggcgtagaa attaaaacct
    43681 ataatgtgat ttataatctt ttagatgatg taaaagcctt gcttggtggt atgatgagtc
    43741 cgattatttc tgaagagcaa ttaggacaag cagagattag acaagtgatc aatgtgccaa
    43801 aaatcggaca aatcgcaggt tgtatggtaa ctgaaggggt gattaaccgt ggagccaaaa
    43861 ttcgccttat ccgtgatgga gttgtggttt atgaaggcaa tgtaagttcg cttaaacgct
    43921 ttaaagatga tgctaaagaa gtggcaaaag gctatgaatg tggcgtaggt atagaagggt
    43981 gcgatgatat gagagtgggt gattatatag aaagctataa agaagtacag gaacaagcaa
    44041 gtctatgaat ccaagtgaga ttaaaaaact acgcactgaa agtatcttaa aagagctgat
    44101 ccctgaagct ttagcaaatt tagatgatga aaatttgaaa aatttgtgtg tagtggatgt
    44161 agagtgtaaa aaaggcagat acgatgcttt tgtgtatctt gataagatgt tttttaatgt
    44221 tcatgagcaa gaaaaaattt tatcttcttt aaaaaaggca agtagagctt tgcaaaatta
    44281 ctgcatgagt gagcagggct ggtataggtg cccgaatttt cactttaaat ttgatgatag
    44341 gcttgagtat caaaaccata tggatgcact ttttgaaaaa ataaaaaagg ataaaaatga
    44401 atcttgaagc cctttgcaaa gaagcagaac ttagctttta tgatgatgag ctagtaagtg
    44461 aaaatggcag aaaaatttat agaatttatg tgcaaaaaga aggtggggta aatcttgatg
    44521 attgtgcaag gcttagtgaa attttatcgc ctatttttga tgtagaacca cctgtaaatg
    44581 gggagtattt tttagaagta tcttcaccgg ggcttgaaag aaaactgagt aggatagaac
    44641 actttgctaa aagtataggt gaacttgtga agatcacaac caatgaaaaa gaaaaattcg
    44701 aagcaaaaat cattgctgta gatgatgaaa atatcacttt agaaaattta gaaaataaag
    44761 aaaaaactac tataaatttt aatgatataa aaaaagctag aaccttcat
//
LOCUS       DAPWGO010000006        43914 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.006, whole genome shotgun sequence.
ACCESSION   DAPWGO010000006 DAPWGO010000000
VERSION     DAPWGO010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 43914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43914
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.006"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..266)
                     /locus_tag="RJ336_000271"
     CDS             complement(<1..266)
                     /locus_tag="RJ336_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDZ5212746.1"
                     /translation="MIFFIIILGACLGSFCTSLASRIIEKKPFFISRSFCFSCDTKLK
                     YYEIIPIFSYIFLKAKCQTCKCHLPISLLINEILGIILLILAYS"
     gene            complement(263..931)
                     /gene="uppS"
                     /locus_tag="RJ336_000272"
     CDS             complement(263..931)
                     /gene="uppS"
                     /locus_tag="RJ336_000272"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HDZ5212747.1"
                     /translation="MNELKHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCM
                     EENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRL
                     EDKVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRVIEKKLELNEENLTQNL
                     DLPLDVDLMLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRER
                     TFGK"
     gene            complement(935..1552)
                     /locus_tag="RJ336_000273"
     CDS             complement(935..1552)
                     /locus_tag="RJ336_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212748.1"
                     /translation="MSMINSTLPIQMKVLAKSGYGHYTLLLNHKKIQTKSMIELEIGA
                     EYLAELYMQNGGVIQFKHLSKRPNFKPFEEGLALIIAILEDKISYKKFIIQNLLDCKD
                     IERYQILKEMLFASFENIYHIPFIFENKSCLFQMRKRAKYLEIYLYFSVFGALKILID
                     SQGISVFTPFAKVQKFLNEHLDFNVSQENKIEPLFVFKRLFDFKG"
     gene            complement(1549..2703)
                     /gene="coaBC"
                     /locus_tag="RJ336_000274"
     CDS             complement(1549..2703)
                     /gene="coaBC"
                     /locus_tag="RJ336_000274"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDZ5212749.1"
                     /translation="MKTILLAISGSIAFYKSYELISLFKKEGFRVKVLLSNSLLKFAS
                     KMSFEALADEILCEENESWQNSNNHIAFSKDVDLVLFAPASVNSINKLAFGIADNLFI
                     QTLIAANKPLIIAPAANTNMFHHFSTQNSLKILKENKALIIEPICKVLACKDEGVGAL
                     AEVKDIFNITKRELLKEKFWCNKSVVITGGGTRERIDDVRCVSNFSSGKMAKAIADAF
                     YFLGARVKLLSSVEFDTPYELCKFESSKDLKELLDKNLSHDFLIMTAAVSDFIPQSVK
                     GKIKKNEHLQGLNLHLSLNEDLLKTCKFQGKKIGFKMEFDSQNALENAKKSLKDKQLD
                     MVCLNIIDQKNYFGSDQNELYFITLNNENKSTLQSKEKLAFELVKWCEKL"
     gene            complement(2700..3989)
                     /gene="glmU"
                     /locus_tag="RJ336_000275"
     CDS             complement(2700..3989)
                     /gene="glmU"
                     /locus_tag="RJ336_000275"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDZ5212750.1"
                     /translation="MKTSILILAAGLGTRMKSQKPKVLQELCQKSMILHILKKAFALS
                     DDVSVVLSHQKERVEKEILEYFPKTQILEQDLQNYPGTAGALRGFEPKNERVLILCGD
                     MPLVEQTSLEALLSNNAKLNLAVFKARDPKSYGRVVIKNDSVEKIVEFKDANTQEKEI
                     NTCNAGVYVIDSRLLKELLPLIDNNNAAKEYYLTDIVKLAKEKDVMIKAVFVDEDEFM
                     GINDKFELSIAENFMQEKIKKYWMQQGVIFHLPQSTFIGTDVEFMGECEVYENVRIEG
                     KSKIINSIIKSSSVIENSIVENSDVGPLAHLRPNCELKNTHIGNFVECKNAKLNTVKA
                     GHLSYLGDCEIDSGTNIGCGTITCNYDGVKKHKTIIGKNVFVGSDTQFIAPVKIEDEV
                     IIAAGSTVSVNVEKGALFINRAEHKMIKDYYYKKFQK"
     gene            4133..4867
                     /gene="fliP"
                     /locus_tag="RJ336_000276"
     CDS             4133..4867
                     /gene="fliP"
                     /locus_tag="RJ336_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344227.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HDZ5212751.1"
                     /translation="MKKILLFLLLSMSLFAAEATIPTVNLSLSAPNTPNQLVTTLNIV
                     IVLTILALAPSIVFVMTSFLRLIVVFSFLRQAMGTQSMPPNTILVTLALILTFFIMEP
                     VATKSYNEGIKPYLAEKIGYEEAFIKGAKPFKDFMLKNTREKDLALFYRIRNLPNPKT
                     IDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISL
                     PFKLLIFVLVDGWNLLVQRLVESFVT"
     gene            complement(4883..5653)
                     /locus_tag="RJ336_000277"
     CDS             complement(4883..5653)
                     /locus_tag="RJ336_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004315550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDZ5212752.1"
                     /translation="MKKIILIFISFFALNLSAKDLVVGMELGYPPFEMSDKTGKASGI
                     SVDFLEAFAKKNGYKLVVKNIAWDGLIPALKTAKIDLIMSSMTITDERKKVVDFSIPY
                     AKANLAILAPLSSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLKNATINLFDKENAA
                     ILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVQKGNAELKKE
                     LDEFIAESKKDGLFDSLGEKYLKDVKDTFKKNNLEFFF"
     gene            complement(5748..7049)
                     /locus_tag="RJ336_000278"
     CDS             complement(5748..7049)
                     /locus_tag="RJ336_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212753.1"
                     /translation="MSIFSINDNSNYNSILSQAKTNKESKENSKISFANAFLKQNASK
                     LNEIQNANSQTLARSEVLNSTNTTNTSNNTNFSISSKTSSPNYDISSEFKNSIYTLKY
                     KQADTSNIVSLAYGYGVDANGYMGEDFNKAAGLPEDFKMHKSTLDEIYNFNEAQYQDI
                     KEHLGISRYFTNIDMADTIKQYYNQFNQIVNHTFNDTNKTSFTEADINSMPKGISELS
                     SKTIGIMPKNYNKLTITNYYNTQEQYNEAEQLGMFGHINIGLQPLNFTPQSMQTQNLD
                     KDTAIDTFNPDMSVYPQNEDGSYSKEALFMSFLKSTGVLPREGSATLNPIAKSYAEAM
                     AKESFDGSLTSLDDIMTGKVDFASLLKGYAQDGWLDADIYAMDKGVKWQNTSIGYSGA
                     WFDNQFNQAKANGWKVSSESINSFADSIADRLNNLIGQTRV"
     gene            complement(7136..7855)
                     /gene="kdsB"
                     /locus_tag="RJ336_000279"
     CDS             complement(7136..7855)
                     /gene="kdsB"
                     /locus_tag="RJ336_000279"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDZ5212754.1"
                     /translation="MIIIPARLKSSRFHEKILCDIGGVPMFVATARRVSNVDEVCIAL
                     DDEKVLSIAKEYGLNAVLTSKDHESGTDRINEACKKLALKDDEIIINVQADEPFIECE
                     NLLKFKEFASSCLDKKAFMASCYKKITQEEAMDPNLVKVLCDKEGYALYFSRAKIPYE
                     RENYEESFKGHLGIYAYSVKALREFCSLSSSALERAEKLEQLRAIENGKKIKMLEIST
                     TSMGIDTKEDYERALKIYLEK"
     gene            complement(7852..9264)
                     /locus_tag="RJ336_000280"
     CDS             complement(7852..9264)
                     /locus_tag="RJ336_000280"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDZ5212755.1"
                     /translation="MKLVESRNVKNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYA
                     NLSYKDFALKLIESFGFGEEELFKKALKSYESFDDKNTPISLQKISEKTYINELWHGP
                     TRAFKDMALQPFGVLLSEFSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKG
                     GTSGVQELQMRALDKDNLKVFAIDEDFDAAQRTLKELLFSKDFQNEIKALNYELCAAN
                     SVNFGRILFQIIYHYYASLKLFNEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIK
                     IASNANNILSEFFNQGVYDLREKSLKKTISPAMDILISSNIERLLFAKFKDKRTKELM
                     NLLKNERYFKLEKEELQSLQEDFEADFCTDEECMQFIKQSKILIDPHTATCFKMLDPL
                     KPSIITSTAEWTKFTPSMIKALYDRDSKNEKEDLKFIAKEFNVQVKDEILALFDLKNS
                     DEKVFEARNIKKEILDWMQK"
     gene            complement(9261..10187)
                     /locus_tag="RJ336_000281"
     CDS             complement(9261..10187)
                     /locus_tag="RJ336_000281"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDZ5212756.1"
                     /translation="MSEEKNYELWLDNYFFKPNFWQKCLAFILLPLSVFYAFFAILNT
                     FFRKKIVFKKPVISVGNLSFGGNGKTPLCKAIAREFDGVFIVLRGYKRKSKGLFVVKN
                     QNEILCTLTQSGDEAMEYAFEENIKGVIVSEDRVKGIEKAFELGAKIVVLDDAFSKFH
                     IKKFDILLESKIKPYFNFTLPSGAYRLPKFYEKRADFIALEGRDFVRYSFVKENPKAV
                     LVTAIAKPFRLYEHFIKARACYFFKDHYEFKKEELENLLKKHNCDTLMLTFKDFVKVK
                     DFGFKCQIIELNIELKDSLREKIKTYIKEFEQ"
     gene            complement(10191..10931)
                     /locus_tag="RJ336_000282"
     CDS             complement(10191..10931)
                     /locus_tag="RJ336_000282"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HDZ5212757.1"
                     /translation="MDWQKITEKMCDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCK
                     RALKENVFALLMPTQISNKANLEDALRLCADLNLEYKIIEIQSILDAFIKQSENTTLV
                     SLGNFAARIRMSLLYDYSALKNSLVIGTSNKSELLLGYGTIYGDLACAFNPIGSLYKS
                     EIYTLAKYLNLHENFIKKAPSADLWENQSDEADLGFSYAKIDEGLKALETNDEKLLRT
                     LDPSLIAMLKNRMQKNTFKGKMPEILEI"
     gene            11005..11601
                     /locus_tag="RJ336_000283"
     CDS             11005..11601
                     /locus_tag="RJ336_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDZ5212758.1"
                     /translation="MQIIKQACGAYETNCYILFSEHGEIIIDPGFDALNFIKKHVKNP
                     LAILNTHGHYDHVWDNEKVKQAYQIPIYIHKNDAFMLEDPFNQGFMPSKADYLIDDEN
                     IISIGGLDFKFHFLPGHTPGCTMIEIVGKNIMFSGDFLFYRSIGRWDFPYSDANLMKQ
                     SLEKVMTYKEDFKLLPGHGQETTLKEEQVHLPSWLRYF"
     gene            11614..11919
                     /locus_tag="RJ336_000284"
     CDS             11614..11919
                     /locus_tag="RJ336_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212759.1"
                     /translation="MELDQILLYAFIFLNLFAFFGLFLGNKKKNQFNDKKFYKICPCK
                     KMAENGSLSTICIYSAVGGFFYSVLSIGFVGFGNWTLNFIFLLALLSVFLGWKLKLD"
     gene            complement(11960..12739)
                     /locus_tag="RJ336_000285"
     CDS             complement(11960..12739)
                     /locus_tag="RJ336_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HDZ5212760.1"
                     /translation="MNTEFQGKTLVISGGTRGIGKAIVYEFAKVGVNIAFTYNSNAQI
                     ADEMVQDLEKNYKIKARAYEFNILEPETYKELFEKIDADFDRVDYFISNAIISGRAVV
                     GGYTKFMKLKPKGINNIFTATVNAFVVGAQEAAKRMEKVGGGSIISISSTGNLVYIEN
                     YSGHGTAKAAVEAMARYAATELGEKNIRVNVVSGGPIETDALRAFTNYEEVKQATINL
                     SPLNRMGQPEDLAGACLFLCSSKASWVTGHTFIVDGGTTFK"
     gene            complement(12739..13635)
                     /locus_tag="RJ336_000286"
     CDS             complement(12739..13635)
                     /locus_tag="RJ336_000286"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDZ5212761.1"
                     /translation="MDKNIIIGAMTALITPFKNGKVDEQSYARLIKRQIENGIDAVVP
                     VGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGAD
                     GILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCE
                     NIYGVKEASGNIDKCVDLLAHEPRMMLISGEDAINYPILSNGGKGVISVTSNLLPDMI
                     SALTHFALDENYKEAKKINDELYNINKILFCESNPIPIKTAMYIAGLIESLEFRLPLC
                     PPSKENFAKIEEVMKKYKIKGF"
     gene            complement(13628..14878)
                     /locus_tag="RJ336_000287"
     CDS             complement(13628..14878)
                     /locus_tag="RJ336_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDZ5212762.1"
                     /translation="MIAYEKIQLKNKLEVYALPVNKNSDVISVDIFYKVGSRNEIMGK
                     SGIAHMLEHLNFKSTKNLKAGEFDEIVKGFGGVDNASTGFDYTHYYIKCAKKNLDKAL
                     ELFAELMANLNLKDEEFQPERAVVLEERRWRTDNNPLGYLYFRLFNHAFMYHPYHWTP
                     IGFFKDIENWSIEDIKEFHSIYYQPKNAILLVSGDIESKEVFELSKKHFEKIKNTRTI
                     PKIHTKEPKQDGVKRIYLHKNSDTELLALAYKIPNFKHKDIPALNALSELLGSGKSSL
                     MSEILIDKLNLINDYYAYVNDCIDENLFIFICNCNPNVNAEKVEKELLKIIDKLKMGK
                     ISQKDLQRVKNNVKSDFIFSLNNASAVANIYGSYLARGDIDPLLNYEKDIQNLELKDL
                     ISCAKKYFIQENSTTVILRKDSNG"
     gene            complement(14875..15933)
                     /locus_tag="RJ336_000288"
     CDS             complement(14875..15933)
                     /locus_tag="RJ336_000288"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDZ5212763.1"
                     /translation="MAYEMIKPLLFKLNPEHAHALVEYSLRALSASFPGALSFLAHKY
                     IVDDESLRQNLLGLDFNNPVGLAGGFDKNATMIRPLSALGFGFLEVGTFTPKPQEGNE
                     KPRLFRLVKQESIQNAMGFNNEGAEKIALRLAKTYPFVLPLGVNIGKNKITPNDKALE
                     DYFTLFRDFKDLCDYFIVNISSPNTKNLRELQNDDFLNTLLEEAKKITSKPILIKIAP
                     DMKIDDALNLCENAIKKGADGFILANTSVDYSLLDNNRTFGGISGRLITEKSGIFFKE
                     VAKILFGKTLLIASGGIDSADIAYERIKNGANLVQVYTALIFKGPSLVKNINQNLIEL
                     LRKDGFLHISEAVGVNLK"
     gene            complement(15965..17707)
                     /locus_tag="RJ336_000289"
     CDS             complement(15965..17707)
                     /locus_tag="RJ336_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5212764.1"
                     /translation="MHNEMNLKEVLIRFKPFYKRYWKQFAIAIFGMILASGGTAGSFY
                     ALEPILNYIFVEKNEALLYTVPFLLVLMYFFKNLGTYLQSFYVSFIGTDMLRVLRARV
                     LKNVLRLDMDFFKRYRSGELVSRCTNDINALQSIVSNIIPDFFRELLTAIGLLAVVLY
                     QSPTLAFFALVILPLAIFPLVWFAKKLKKYARNIQETNSDLLSYLGEIFSNIELIKAN
                     DNEKKESDKFAKHNDTLCKLNLKSARIDALTSPLMDMMGSVGVAVVIIVGGREVINGS
                     MSVGSFISFVSALFAIYTPLKRLSSLYGKLQGAVAASERTFYLLDLEPQIKGGSKELK
                     NIEKISFENVEFAYENPHKSVLKGVNFDFVKGQMLALVGTSGGGKSSIINLLMYFYEK
                     QKGKILLNQEDISTFTIESLHAKIGLVTQNIYLFNDSFAANIAYSEELEEEKVIQALK
                     LANAYEFVKEMGGIWAEVKEHGKNLSGGQKQRIAIARALYKNPDVLIFDEATSALDNE
                     SEKAIVKTIENLKQDRLILVVAHRLSTIENADKIVVLDKGKVLAIGKDEELLQTCSLY
                     QKFKSKEKTKPSFS"
     gene            complement(17700..19088)
                     /locus_tag="RJ336_000290"
     CDS             complement(17700..19088)
                     /locus_tag="RJ336_000290"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDZ5212765.1"
                     /translation="MRLLDSVAKEKIKLDKKDISIYLCGPTVYDDAHLGHARSSVCFD
                     LLRRVLLANGNRVKFARNYTDIDDKILKKMAQSGQTLEEITEFYIKSYEEDMRVLNVL
                     DPDFKPRATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS
                     RLSNEVQKRNESDFVLWKFDENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGI
                     DLLFPHHENEAAQCRCGCKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDALKEFMG
                     EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKS
                     EIAKQILEILNDDLNISKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIF
                     GFGFMDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIRERLSSKKITLLD
                     TPNGTIWEKINA"
     gene            complement(19088..20539)
                     /gene="murJ"
                     /locus_tag="RJ336_000291"
     CDS             complement(19088..20539)
                     /gene="murJ"
                     /locus_tag="RJ336_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDZ5212766.1"
                     /translation="MKSLVFKNFIINALGILFSRILGLARDVLIALFLGAGLYSDIFF
                     VALKMPAFFRRIFAEGAFGQSFLPNFVKAKKKGAFCVSVMMQFSLIVFLFCLLVSFFS
                     SFFTKLFAFGFNADTIALAAPLVAINFWYLFFIFLVTFLGAILNYRQKFFITSFSAAL
                     FNLSIVIAAFFVDKNAPQNTLYYFSYATVLSGVAQLILHLLVLKNNPVIRAMALSIKF
                     KKAKAKLQGFYGNFFHGVLGSSATQFSSLLDTTIASFLMSGSISYLYYANRVFQLPLA
                     LFAIALTQVSFPKILKHLKSGQENLALKFMQRALAFLSILLIASSIIGSAFALEISKL
                     LFERGNFTHEDSVITAYVLIAYLIGLLPFGLQKLFSLWLYAKFKQKTAAWIAVKSLII
                     SALCSMAFIFLIKDESLKVIAVALSSSISAFYLLGANIKEFGFKKFFALISIKICLLV
                     IVALIVFTILLILIKPYILSFFIGIFTSFKGVF"
     gene            20643..22502
                     /locus_tag="RJ336_000292"
     CDS             20643..22502
                     /locus_tag="RJ336_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HDZ5212767.1"
                     /translation="MALDEKIIAYTENPARELLSVASRTNLSLNELDFSLLAFSTQYR
                     FGDLEWEKISEKELTLFDKDEIFLKNDLQIKQEYKIEIFHGINQSKASQAVKLVANKN
                     LTKIVAQIDFTNLDFHEKLALELLQNIYKKMLKLKFLIGIRIFDFKKNLMSFCNQHKN
                     TPLNKTIQITVAQGIDPIESQDESLILTYKEKTKNYTIDEKRSGIIVVDENEVVLKHA
                     KFKQGKEGKDLNLHTLKVLAANENKVKFSCSSAFKQVEQDGYTEYIALKKGYVVQDGE
                     KFDIANELDFNGVDFKNIGIIRAGLDKNVKINIKFLSEVKDAVNSGVGIECEELNVVG
                     SVGSNTQLNATKMKIEGTTHSKAKIQAKQAYIKTHRGFAEAEILNIDLLEGGTIKAKE
                     VRIKKSLGGNIQADKIYIENLESNNSCVFFENTTIERINGDNNKFHAKIKTLDKNYDE
                     EFAILGEQISKLNHKINKIRQYILSSKNGILSVEKKITELKNQGQNVPVQYEKALKDF
                     SLQNLELNKLQNEEKELLERKKSLQLELINLQKMLFEATFINKSGKWTDMNEIKFSLL
                     EPKEDIFYSSFVNESAKFIGIKKVIQNNQESIEIHKKLDYEEKDIAWLSASKE"
     gene            22478..23029
                     /gene="ruvA"
                     /locus_tag="RJ336_000293"
     CDS             22478..23029
                     /gene="ruvA"
                     /locus_tag="RJ336_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDZ5212768.1"
                     /translation="MVVGIEGIITKKEPTFIIVKCASGLSYGIFISLFCSAKIQTQEK
                     HEFFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNGVGANTAMAVCSSLDVNSFYKAL
                     SLGDESVLKKVPGIGPKSAKRIIVELSDTKTKLENVSDDKSEALAALLTLGFKQEKII
                     SVLASAQATGTSELIKEALKKLG"
     gene            23039..24079
                     /locus_tag="RJ336_000294"
     CDS             23039..24079
                     /locus_tag="RJ336_000294"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDZ5212769.1"
                     /translation="MKFAILFGGNSYEHEISIVSAVVLKKVINQNLEFVFCDEERRFY
                     HIPSEKMNSKTFSTKAYKNEKELFIKQGGFFSKGFLKENKLECECVINLIHGRDGEDG
                     KIAALFEFYSIKFIGPRLEASVLSFNKELTKLYAKSVGVKTLDYTMLRKNQNSKEKLS
                     FPCIIKPARLGSSIGISIVKDEKDLEYAKDVGFEFDNDLVVEEFKNNIKEYNLAGCMI
                     NDEFVFSIIEEPKKKEFLDFEQKYLSFSGHNELIEADLSEELKEKLKDSFKKIYNPLF
                     KGALIRCDFFILDNEVYLNEINPNPGSLANYLFKDFNTTLNALADQISLEKMIKINYN
                     FLHSINGQKGKL"
     gene            24139..24354
                     /locus_tag="RJ336_000295"
     CDS             24139..24354
                     /locus_tag="RJ336_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HDZ5212770.1"
                     /translation="MLSFKQDEIYTATEVVRNFSPIMEKLKKSESGKIVILKNNKFEA
                     VMLSMKEFERLQNAMQLLENIYKNQKA"
     gene            24356..25075
                     /locus_tag="RJ336_000296"
     CDS             24356..25075
                     /locus_tag="RJ336_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDZ5212771.1"
                     /translation="MAQTQLSYKNKTYQISYEILGDLSLPQILILHGWGANKELMKQS
                     FCPFLKDFCQIYMDLAGFGNSSVEEILNTQDYANITELFLKQKKLDVCFFMGHSFGGK
                     VSTLLAKEKDTLILLSSAGILAKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGVNL
                     SPMMYETFKKVVDEDFSEIFAKQKAKSLIFWGKSDEATPLYCGEKMHELLKNSTFYPL
                     EGDHFFFLKHSAFIAQKIKEI"
     gene            25076..26503
                     /locus_tag="RJ336_000297"
     CDS             25076..26503
                     /locus_tag="RJ336_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDZ5212772.1"
                     /translation="MLINALYFVNSLFFNFCIAFYLMSALQWYSYKFKRVFFHYHKPL
                     WHLYFLFIPYFLFLAFPLYSLAYFALIHTPILYFWSKGIDKKLVFTSKVKWFFVFVFV
                     YNAIFAILALRFSFLFNLFSLPFALFSLKIYEFFTNLYYKKQAKAKLRANENLKIILI
                     TASFGKTSIKNFLYELLKDDFKSYKTPRSVNTLLGIVADINTNLSQDTQIYIAEAGAR
                     LKGDIDEITRFLQPHISIVGEIGNAHLEYFKSVENIRSTKLEALNSKRLEKAFLHSST
                     QKEEDKLISLYDDKLSLIHSSLEGLEFKIDIENKSYDFKSQILGDFNAQNLCVCILCA
                     HYLGIKLEKIQKQVLNINSVEHRLQVLSREPKFIIDDGFNGNFKGMSTSYELCKSYKG
                     RKVLVSPGIVEVSEEENIKLAKIINECFDLAIISAQINAEIFKKELKIKTIILKEKSQ
                     LVQTLAKETKNGDLILFSNDAPSFM"
     gene            complement(26562..27881)
                     /locus_tag="RJ336_000298"
     CDS             complement(26562..27881)
                     /locus_tag="RJ336_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212773.1"
                     /translation="MSIFSINDNSNYNSILSQSKANKESKENSKISFANAFLKQNASK
                     LNEIQSANSQTLARSEVLNSTNTTNTSNNTNFSISSKTSSPNYDISSEFKNSIYTLKY
                     KQADISNNTAYGYSVDKDGYMGSDFNKAAGLPEDFKIHKSTLDEIERVAEYNVSDIRE
                     YLGVDKYYSNIDMAETIKQYYNLFSNALGQSFPSDKTSFSEADINSMPSGYAVGGDKC
                     MNFNDPNNRMNITGLKDFSNSLISNVYKTHEQAKEADDLWVDSGYMIDGLLPKTLGLS
                     LEEIKNVSKGEDWQFNPDMSVYPQNEDGSYSKEALFMSFLKAQNGQPVESPKTTLNPT
                     IEAYNRAMAKESFSTTSVDIGDIMTGKVDFASLFKYLASKNGKLEGQLYMYENNISKE
                     SAMGNWALDAEIKQAIANGWKAKPSTINSYADSIMDRLNNLIGQTRA"
     gene            complement(27980..28999)
                     /gene="flgS"
                     /locus_tag="RJ336_000299"
     CDS             complement(27980..28999)
                     /gene="flgS"
                     /locus_tag="RJ336_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system sensor
                     histidine kinase FlgS"
                     /protein_id="HDZ5212774.1"
                     /translation="MNESILKSLDSNEKETLQKGLESLIEQTYVIENEYKTLNENYNS
                     LRAMVDEIIEVLPSALWILDKEKNIILQNQEALKNPKLLSIISLDKIRDELEFEGRFY
                     AVKIIAHNEKTIVSAIDISDEKRNERLASMGSVAAHLAHEIRNPIGSISLLASTLFAR
                     SELKNKHIVLEIQKAIARVERIVNSTLLFTKGVHINALNFNLLELKEECESAINSYNF
                     TSQIDFEISFLDKQICADKALLGLVLQNLIYNAIDAIEESECEKPMIKILASCDNEKI
                     CIRVYDNGCEIKDEKLVFEAFKTTKLKGNGLGLSLSKEIINAHKGELSFQSDPKNFYF
                     TLPLV"
     gene            complement(29003..29881)
                     /locus_tag="RJ336_000300"
     CDS             complement(29003..29881)
                     /locus_tag="RJ336_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ5212775.1"
                     /translation="MLYKRKNIKFKNFVDLHKNLSLSKLFDFYSVFEGFEKLNILNFE
                     DDIFTNIERILLDDYLKIKSYFALDETSSYALTLLAKNNRKRFSINRKIQHFKALSTL
                     KYLLETGIIKLEYSKEAKKIKDKRQKIKKELRSYVVQDKIIFSSHFTRFFFYFLKPNE
                     KLILQNRYKEVLECIKEKFELYQSFCFEQLSRELLEKKFNINGVQSYWDKNLELDLYY
                     QDENLCFVGEVKFKNKKICKNILNLLKSKAKSLNLAPNYYIIISKNGFSKEFDKICEQ
                     NLLLLDLNDFKILLEE"
     gene            29917..31191
                     /locus_tag="RJ336_000301"
     CDS             29917..31191
                     /locus_tag="RJ336_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HDZ5212776.1"
                     /translation="MYLQISDLKKELILKKGILHFDFTASALALKCVEKEISKILPTY
                     ANTHSDSSLNSFKTQQTYEQARKDIKKSLSLDENFALIACGTGSSSAIKKFQELIGIY
                     IPPLVKERYFTQIDKNTLPLVIVGPYEHHSNELSFREGLCECIRIPLDKNGEIDFDFL
                     EKTLQKNKKRKIIASFSLASNVTGILSDYKRISEMVRKFKGIVAFDASSFIPYKNISC
                     QYYDALFISSHKLIGGIGGSGLLAIKKDLCGNKPSFAAGGTVGYVSRTSQCYLCNEEA
                     LEEGGTPGILQLIRASLAFKIKDSIGIKNIEKKEEILKDYFFEKLKTIPNLILYAKNL
                     KTRLPIFAFNIKGISPFDIAYELSKKYHIETRAGCACAGPYGHDLLGLKDNQKLKTKP
                     GWLRISLHYTHEKEDIDYFFNALNKTIVKLSH"
     gene            complement(31188..32012)
                     /gene="purU"
                     /locus_tag="RJ336_000302"
     CDS             complement(31188..32012)
                     /gene="purU"
                     /locus_tag="RJ336_000302"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDZ5212777.1"
                     /translation="MISVLKICTKDQKGLIYRISDVIFKYHINIVKNDEFVGEGMFFF
                     RALLEGEFDKEAFIGTLEAMLGQEALIELCEKRKKDIVVFATKESHCLGDLLIKHYSN
                     ELEANIKAVISNHNSLKDLVEKFEIPYHFISAENLDRKEQENQILKCLEQYKFDYLVL
                     AKYMRILSPDFVRHFEGKIINIHHSFLPAFIGANPYKQAFERGVKIIGATAHFVNNNL
                     DEGPIITQAVLPVNHEFTWQDMQQAGRNIEKDVLSKALDLAFEDRIFIHNNKTIIF"
     gene            complement(32009..33127)
                     /locus_tag="RJ336_000303"
     CDS             complement(32009..33127)
                     /locus_tag="RJ336_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HDZ5212778.1"
                     /translation="MQISKISLKNNSDLQFIAEFLKPYTKRAYLVGGSVRDLFLGLKI
                     CDYDIELYDIKLKDFEKIMQKLGAQGFGKSFFVYKFKNYDLALARTENKISYGHKGFE
                     VQICNDEKLGAKRRDFTINSMMINLFNDEFLDFYGGLKDLGAGFLRHIDKQSFQEDSL
                     RVLRAVVFASRFNFKITSESLKLMQSMDITDLSKDRINAELYKFFKSPRLDVGYRYLQ
                     ELGLEKQVFGFESVFKSLEFQNLLRQSREFVKSDALFLYLYLNFFNLEKDIFFKRTKL
                     KKEYLKYANQAFYLDDISDFELAKIAFEMPLKEWLGLWSKKRIEQAKRLGLYENKFES
                     KILAKDFINAGFCGKILGLKLQEARENELKEYIKGLVK"
     gene            complement(33096..33587)
                     /locus_tag="RJ336_000304"
     CDS             complement(33096..33587)
                     /locus_tag="RJ336_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate:acceptor oxidoreductase"
                     /protein_id="HDZ5212779.1"
                     /translation="MNLEDLAKKTISEVSSIMEEQRRQNEILKEQELNRKTEIKDELP
                     PMEFVCEELDTPQDLEDKISMAKFEEEQKIQNNIEISTQENKEFKKEEPFLQSEILNP
                     SVITEVQTLNEDIFLKHLRERILVLFEGLNSIKKDDLENRLNLTINFLEFLLANIEDK
                     LKK"
     gene            complement(33584..33832)
                     /locus_tag="RJ336_000305"
     CDS             complement(33584..33832)
                     /locus_tag="RJ336_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDZ5212780.1"
                     /translation="MMKNTVTEASIYEAQGLKDEALEIYKNILKEDPDNQNAIDAVRR
                     LSGFRSKHKDLNTQMLDFFINMKSDEEINEFKRWLIKI"
     gene            complement(33911..34084)
                     /gene="tatA2"
                     /locus_tag="RJ336_000306"
     CDS             complement(33911..34084)
                     /gene="tatA2"
                     /locus_tag="RJ336_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA2"
                     /protein_id="HDZ5212781.1"
                     /translation="MVFLIPLLIIIGVIFGIDYVYFKNQDLKAQVKKEQKELNSSLEK
                     EKKEYIEKLFKTK"
     gene            complement(34094..34432)
                     /locus_tag="RJ336_000307"
     CDS             complement(34094..34432)
                     /locus_tag="RJ336_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HDZ5212782.1"
                     /translation="MNNLSSVLILVKEEYINDLKKAISEIPFCSVELCENEKIIVVIE
                     SENLEDELNSYKMLEKLPNIISINMVFSYQDLNDDIQKAINSGAIETIEKNENAENIR
                     YYGSVFNQFS"
     gene            complement(34425..35339)
                     /locus_tag="RJ336_000308"
     CDS             complement(34425..35339)
                     /locus_tag="RJ336_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HDZ5212783.1"
                     /translation="MKKFLFILSLFCVLSYAYELKLNANITALKLDKQNLYIGTDKGE
                     ILQYNIKDKSLKELLSLPKIKNYYGDDFAKIYNIDVFKHTLLILSEGDFGAKNLSFYK
                     ENLQIKKLEENSIIKAFFINENTYLLISIGSEIELIDKSLKNIKKFNFSHSSLNDAVL
                     NEDKSRLVAGFESGEVELFDLKNWKMLKNYDKMHKDNIYQVDFKNNVILSCGTDRRIG
                     VVKNEEQNFLQKDFLIYTCALSPNGELAVYSDNEAGVSEVFSTSDFKPVKTFNNENLM
                     SEFIIFLNNKDFIISGFGDSIMFRSIDE"
     gene            complement(35344..35868)
                     /locus_tag="RJ336_000309"
     CDS             complement(35344..35868)
                     /locus_tag="RJ336_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HDZ5212784.1"
                     /translation="MMKKKLVLLGSAAVVFFAACAMNSGVSSEQIGLRKASLENENKV
                     NLVEANFTTLQPGESTRFERSYENAPPLIPHAIEDLLPITKDNNMCLSCHDKAIAADA
                     GATPLPASHYYDFRHNKTTGDMISDSRFNCTQCHVPQSDAKPLVGNSFKPEFKNEQLK
                     SRSNLIDVINEGVK"
     gene            complement(35865..36647)
                     /gene="napH"
                     /locus_tag="RJ336_000310"
     CDS             complement(35865..36647)
                     /gene="napH"
                     /locus_tag="RJ336_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HDZ5212785.1"
                     /translation="MMKYLIARRIVQLGILALFSFKATDFILQGNLSSSRFFNTIPLS
                     DPFAVLQIILASWSIDLMALIGALIIFFIYGLLLGRVFCSWVCPVNLITDFAAFVRNK
                     LTLNNKFLILPKNLRYFVLVLVLVLSFVFSLPVFESFSYIGMIHRGIIFATSSWIFVA
                     FILFCIDTFLSPRAICSHFCPLGAFYAFISRFALLKIKHDSDKCTKCYECIRICPEKQ
                     VLWMVGKESTSVKSGECIRCARCIEVCNDDALNFNIFDLRNK"
     gene            complement(36644..37384)
                     /gene="napG"
                     /locus_tag="RJ336_000311"
     CDS             complement(36644..37384)
                     /gene="napG"
                     /locus_tag="RJ336_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HDZ5212786.1"
                     /translation="MKGRREFFVSAFKAACLCTGGGFLANLALKADDNYALRPPGAED
                     EARFLSKCIRCGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIREC
                     PTDALDKKHLEQGIESLKMGIAIVDSASCVAHWGIQCDACYRACPLIDRALKLELKRN
                     ERTAKHAFLLPSVDHEVCVGCGLCELACITEKPAIRVLPREYVLGKAGSHYVKGWDEK
                     DEGRIKNADTSKHFDAKKATNYLNDGEL"
     gene            complement(37402..40176)
                     /gene="napA"
                     /locus_tag="RJ336_000312"
     CDS             complement(37402..40176)
                     /gene="napA"
                     /locus_tag="RJ336_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HDZ5212787.1"
                     /translation="MNRRDFIKNTAIASAASVAGLSVPSSMLGAQEEDWKWDKAVCRF
                     CGTGCGIMIARKDGKIVATKGDPAAPVNRGLNCIKGYFNAKIMYGEDRLVMPLLRMNE
                     KGEFDKKGKFQQVSWQRAFDEMEKQFKKAYNELGVTGIGIFGSGQYTIQEGYAALKLA
                     KAGFRTNNIDPNARHCMASAVVGFMQTFGVDEPSGCYDDIELTDTIITWGANMAEMHP
                     ILWSRVSDRKLSNLDKVKVVNLSTFSNRTSNIADIEIIFKPNTDLAIWNYIAREIVYN
                     HPEAMDMKFIKDHCVFATGYADIGYGMRNNPNHPKFKESEKDTVEKENVITLDDEEAT
                     SLSYLGVKAGDKFEMKHQGVADKNWEISFEEFKKGLAPYTLEYTAKVAKGDDNESLED
                     FKKKLQELANLYIEKNRKVVSFWTMGFNQHTRGSWVNEQAYMVHFLLGKQAKPGSGAF
                     SLTGQPSACGTAREVGTFSHRLPADMVVANPKHREISEKIWKVPAKTINPKPGSPYLN
                     IMRDLEDGKIKFAWVQVNNPWQNTANANHWIAAAREMDNFIVVSDCYPGISAKIADLI
                     LPSAMIYEKWGAYGNAERRTQHWKQQVLPVGAAMSDTWQILEFAKRFKLKEVWKEQKV
                     DNKLTLPSVLEEAKAMGYSEDDTLFDVLFANKEAKSFNPNDAIAKGFDNTDVKGDERK
                     IQGSDGKEFAGYGFFVQKYLWEEYRKFGLGHGHDLADFDTYHKVRGLRWPVVNGKETQ
                     WRFNTKFDYYAKKAAPNSDFAFYGDFNKMLTNGDLIAPKDEKEHSIKNKAKIFFRPFM
                     KAPERPSKEYPFWLATGRVLEHWHSGTMTMRVPELYRAVPEALCYMSEKDGEKLGLNQ
                     GDLVWVESRRGKVKARVDMRGRNKPPVGLVYVPWFDENVYINKVTLDATCPLSKQTDF
                     KKCAVKIYKA"
     gene            complement(40446..40973)
                     /gene="tpx"
                     /locus_tag="RJ336_000313"
     CDS             complement(40446..40973)
                     /gene="tpx"
                     /locus_tag="RJ336_000313"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDZ5212788.1"
                     /translation="MSTVNFKGNPVKLKGNSVEVGADAPKVNLKAKDLSVIEIGAAGK
                     TQIILSVPSLDTPVCATEAREFNKKVASYNGAEVIVVSMDLPFAMGRFCSTEGIENLS
                     VASDFVAKEFGEKYGVLVNEGALEGLLARAVFVIKEGKVAYKELVNEITEMPDIAKLD
                     AFFGGSSCCGGCGCH"
     gene            complement(41071..41811)
                     /gene="peb2"
                     /locus_tag="RJ336_000314"
     CDS             complement(41071..41811)
                     /gene="peb2"
                     /locus_tag="RJ336_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family adhesin PEB2"
                     /protein_id="HDZ5212789.1"
                     /translation="MKKILILSLVAASFLNAEILVYGPGGPAPVLKELALKFEEKTKE
                     KVIVTAGPTPAWIDKAKENADLIFSGNTSMMDDFAKKIPSLSLENLSVLNVRPSGIIV
                     RPNNPKNIKNFEDILKDGVNVMVVDGAGQVGLYEDMALKSAKRENLVKLRKNIKIYAK
                     NSKAAVDEWNNNPNIDALIIWSHWAKALGDDKALFIKDKNAVIYRAAEIAPTKKGLEN
                     KKALEFVDFIKSKEAQKVWKKYTWKEVK"
     gene            complement(41860..43890)
                     /locus_tag="RJ336_000315"
     CDS             complement(41860..43890)
                     /locus_tag="RJ336_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HDZ5212790.1"
                     /translation="MPLSELNNEQYLAATADFGRNLVIASAGTGKTSTIVARISYLLS
                     KGVAPQKIMLLTFTNKASKEMIGRLGKFFDKNITSKILAGTFHSTAYTLLRNADKNIA
                     LKQASELKTLLKSVYEKRTFRHLSDIKPYQSSYLYDLYSLFQNKAHNQDFYTWFCQNY
                     EDQSIYAEIYEDILKEYDNEKKRFNYVDFNDLLINLKELLKEEKYEFDEILVDEYQDT
                     NTLQSSLIEAFHSKSLFCVGDYDQSIYAFNGADINIIGGFKDRFKDAKIFSLNKNYRS
                     SRSILALANKVILNNERLYPKELIVTRNDEFKAPSLLTFEELFDQYQNIAKMILTSGV
                     SLEEIAVIFRNNSSADGVEVALREQGIASVRKGSGSFFESLEVKAFSSMLALVVNPKD
                     IMAFIHLVQYTKGVGGVLAKEIFDALLKLGHGNLIKGFLDPDKNVNLQNHQKRNYQLG
                     LFADLEELASETRFKFESEFDAHPILRLSKINDLCARNLEKIYLFLKKAMEIKHSLTL
                     VNLICENSFYREICEELATKRATNKAGQVDLLRKGENLEKIETKFNVLKELTKNYSDI
                     YKYYNFLTLGASEMSSGKGVNLLSVHASKGLEFDLVFVIDLAQGRFPNQKLMGMGGSL
                     EEERRLFYVAVTRAKNILYLSYAKYDKNKKTSFAPSRFLIEAGLCKGELTID"
BASE COUNT        15111 a         7769 c         5464 g        15570 t
ORIGIN      
        1 aaagaataag ccaaaataag caaaattatg cctaaaattt cattgattaa caaagaaata
       61 ggcaaatgac atttgcaagt ttgacatttt gcttttaaaa aaatataaga aaaaatagga
      121 ataatttcat agtattttaa ttttgtatcg caagaaaaac aaaaagagcg cgagataaaa
      181 aagggctttt tttcaattat cctacttgcc aaacttgtgc aaaaagaacc caaacaagcc
      241 cctagaatta ttatgaaaaa tatcattttc caaaagttct ttctctattt ctaaattctt
      301 taataatcct tttaaattct ctcttggtaa gagatggaaa taaagtttca ctaaaataaa
      361 tttcagcata tgaacactgc caaagtaaga aatttgaaag ccttttggca tttccaacgc
      421 gaagcatcaa atccacatct aaaggtaaat ctaaattttg cgttaaattt tcttcattta
      481 gctcaagttt tttttcaatc acacgcttag cagctcttat aatttcatct cttgcaccat
      541 aacttatagc caaattaaca caaagtgcgt cacaatgctt tgttttttct tcaactaagg
      601 taattttttc tcttacttta tcttccaaac gcgataaatc acctatagct cttaaacgca
      661 cattattttt ttcaaatttt tctaaagctt catctaaaca acgatctaaa agttcaaaaa
      721 taaaatcaat ttcatcttta gggcgcttcc aattttccgt actaaaagca aaaaggctta
      781 aatttgaaat attttcctcc atgcaaactt ccatcaattt ttgcatagtt ttgactcctt
      841 gggaatatcc aagttttgcc aaaaaaccct tagctctagc ccagcgccta ttgccatcca
      901 taacaacagc aaggtgtttt aattcattca tttttcatcc tttaaaatca aaaagccttt
      961 taaaaacaaa caaaggttca atcttgtttt cttgcgatac attaaaatct aaatgttcat
     1021 ttaaaaattt ttgcacctta gcaaaaggtg taaaaacact aatgccttgc gagtctatta
     1081 aaattttcaa agctccaaaa acactaaaat ataagtaaat ttctaaatat tttgctcttt
     1141 tacgcatttg aaataagcaa gatttatttt caaagataaa aggaatatga taaatatttt
     1201 caaaacttgc aaaaagcatt tcttttaata tctgataacg ctctatatct ttacaatcta
     1261 aaagattttg tatgataaat tttttataag aaattttatc ctctaaaata gcgattatca
     1321 aagccaatcc ctcttcaaaa ggtttgaaat taggacgctt tgaaagatgt ttaaattgta
     1381 taactccacc attttgcata taaagttcgg ctaaatattc agcaccaatt tcaagctcta
     1441 tcatgctttt ggtttgaatc tttttgtgat ttaacaaaag cgtataatgt ccataacctg
     1501 atttagccaa aactttcatt tgtataggca aggtagaatt aatcatactc ataatttttc
     1561 acaccatttt actaattcaa atgccaattt ttctttgctt tgcaaagtgc ttttattttc
     1621 attgtttaaa gtgataaaat aaagttcatt ttgatcactt ccaaaataat ttttttgatc
     1681 aatgatatta agacaaacca tatcaagttg cttatctttt aaagattttt tcgcattttc
     1741 taaggcattt tgagaatcaa attccatctt aaaacctatc tttttgcctt gaaatttaca
     1801 agttttaagc aaatcttcat ttaaagatag atgtaaattt aaaccctgca aatgctcatt
     1861 ttttttaatt tttcctttta cactttgtgg gataaaatca ctcactgcag ctgtcataat
     1921 caaaaagtca tgacttaaat ttttatccaa aagctccttt agatccttag aactttcaaa
     1981 tttgcaaagc tcataaggcg tatcaaattc cacagagctt aaaagtttta ccctagctcc
     2041 taaaaaataa aaagcatcag ctatggcctt tgccattttt ccgcttgaaa aattactcac
     2101 acaacgcaca tcatcgattc tttcccttgt gccaccacct gtgataacta cgcttttatt
     2161 gcaccaaaac ttttctttta aaagctctct tttggtgata ttaaaaatat ccttaacttc
     2221 agctaaggct cctacgcctt catctttaca agctaaaact ttacaaatag gttctataat
     2281 caaagcttta ttttctttaa gtatctttaa agaattttgc gtactgaaat gatgaaacat
     2341 atttgtattt gccgcaggag caatgataag aggtttattt gctgcgatta aggtttggat
     2401 aaaaagatta tccgctatac caaaagcaag tttattgata gaattaacac ttgcaggagc
     2461 aaataaaaca agatctacat ccttgctaaa agctatgtga ttgtttgaat tttgccaact
     2521 ttcattttcc tcgcataaaa tctcatcagc caaggcttca aaactcattt tgctagcaaa
     2581 ttttaacaaa ctattagaaa gcaaaacttt caccctaaag ccttcttttt taaacaaaga
     2641 aataagctcg taagatttat aaaaagctat actgccacta atggctaaaa gtatggtttt
     2701 catttttgaa atttcttgta ataataatct tttatcatct tatgctctgc tctattgata
     2761 aacaaagcac ctttttctac attgacactt actgtgcttc ctgctgctat gatcacttca
     2821 tcttcgattt ttacaggtgc gataaattgc gtatccgaac ctacaaaaac attttttcct
     2881 atgatggttt tatgcttttt taccccatca taattacatg taatagtccc acagcctata
     2941 ttggttccac tatctatctc acaatctccc aaatagctca aatgccctgc ttttacggta
     3001 tttaactttg catttttgca ttctacaaaa tttcctatat gagtgttttt taactcacaa
     3061 tttggacgca aatgtgccaa aggccccaca tcgctatttt ctacaatgga attttctatc
     3121 acgcttgaac ttttaatgat agagtttata atcttacttt taccctctat ccttacattt
     3181 tcatatactt cgcattcacc cataaattca acatctgtac ctataaaagt gctttgcggt
     3241 aaatgaaaaa tcacaccctg ttgcatccag tattttttaa ttttttcttg catgaaattt
     3301 tcagctatac tgagttcaaa tttatcattg atccccataa attcatcttc atctacaaaa
     3361 accgctttaa tcatcacatc tttttctttt gctagtttta caatgtcggt taaataatac
     3421 tcttttgccg cattattgtt atcaatcaaa ggtaaaagct cttttaaaag cctagagtca
     3481 atcacataaa ccccagcatt gcaagtattt atctcttttt cttgtgtatt tgcatcttta
     3541 aattcaacaa ttttttcaac gctatcgttt tttatcacca ctctgccata acttttagga
     3601 tctcttgctt taaaaactgc tagatttaat tttgcattat tactcaacaa agcttccaaa
     3661 cttgtttgct caaccaaagg catatcgcca caaagaatca acactctttc atttttaggc
     3721 tcaaaccccc ttaaagctcc cgcagttcct ggataatttt gcaagtcttg ctctaaaatt
     3781 tgtgtttttg gaaaatattc taaaatttct ttttcaacgc gttctttttg atgcgataaa
     3841 actacactta catcatcact taaagcaaaa gcctttttta aaatgtgtaa aatcatactt
     3901 ttttgacaaa gctcttgcaa aacctttggc ttttgtgatt tcattctagt gcctaatcct
     3961 gccgctaaaa tcaaaataga agttttcatt ttttaccttt gttattaaga aatctaaaag
     4021 actattttag cagtttaaag ttaaaatcct aataccctta aactagtttt tagtcatcaa
     4081 aagataaaat ttaaatttct ttaataaaaa acaaaaaaaa ggtttttaaa ttttgaaaaa
     4141 aatattatta tttttacttt taagcatgag cttatttgct gctgaagcaa ctatccctac
     4201 agtaaattta agcttaagtg cacccaatac acctaatcag cttgttacta ctttaaatat
     4261 agtgattgtt ttaaccatac ttgcactcgc tccaagtata gtttttgtta tgacttcttt
     4321 cttgcgtctt attgtggtat tttcattttt gcgacaagct atggggacgc aaagtatgcc
     4381 acctaacact attttagtaa ccttggcttt aattttaact ttttttatca tggaacctgt
     4441 agctacaaaa tcttataatg aaggtataaa accttattta gcagaaaaaa taggctatga
     4501 agaggctttt ataaaaggag caaagccttt taaagatttt atgcttaaaa atactcgcga
     4561 aaaagattta gccctttttt atcgcatacg caatctaccc aatcccaaaa ccatagatga
     4621 tgttcccctt acggttttag ttcctgcttt tatgatttca gagcttaaaa ctgcttttga
     4681 aatagggttt ttaatctacc tacctttttt agtcatagat atggttgtaa gctcagtttt
     4741 aatggctatg ggtatgatga tgctacctcc tactatgatc tctttacctt ttaaactctt
     4801 aatttttgta ttagtggatg gatggaattt gctagtgcaa aggcttgtgg aaagctttgt
     4861 aacctaagaa ggaaaatcct tcttagaaaa agaattctaa attattcttt ttaaaagtat
     4921 ctttaacatc tttaagatat ttttctccta aagaatcaaa aagcccatct tttttgcttt
     4981 ctgcaataaa ttcatcaagc tcttttttaa gttctgcatt acctttttgc actgctatac
     5041 cccaaaactc aggattttct tgaaaaggtg ccaaaatggc tctagttgta tcttgatgtt
     5101 tttgccaagt gcgataaatc gtaagttgat cataaaaaaa tccatcagcc ttaccttgaa
     5161 tcacttccaa aatagcagca ttttctttat caaataaatt aatagttgca ttttttaaat
     5221 ttttaaccgc atataaatgc cctgtagaac cacgctttaa agccaaaact ttgccctttt
     5281 tatctaaatc tttgatattt gtaatatcag agctcaaagg agctaaaata gccaaatttg
     5341 ccttagcata aggaatgcta aaatccacca ctttctttct ctcatcggta attgtcatag
     5401 aagacatgat aagatctatc ttggctgttt ttaaagcagg tattaaacca tcccaagcga
     5461 tattttttac tacaagttta tagccgtttt tctttgcaaa agcttctaaa aaatccacac
     5521 taattccact tgctttgcct gttttatcgc tcatttcaaa aggcggatat ccaagctcca
     5581 ttcctacaac caaatctttt gcactcaaat ttaaagcaaa aaaagagata aaaatcaaaa
     5641 taattttttt cataatttcc tttcaaattt ttttgtaaaa aaattatact aattttatct
     5701 tattttgtta ttagcaattt gcttcaaact taaaaaatta atacttccta aaccctagtt
     5761 tgtcctataa gattattaag tctatccgct atagaatcag caaaagaatt tatactttca
     5821 ctgcttactt tccaaccatt agcttttgct tgattaaact gattatcaaa ccaagctcca
     5881 ctataaccta tgcttgtatt ttgccattta acccctttat ccattgcata tatatctgca
     5941 tcaagccagc catcttgtgc ataacctttt aataaacttg caaaatcaac tttacctgtc
     6001 ataatgtcat ctaaggaagt taatgatcca tcaaagcttt ctttagccat agcttcagca
     6061 taagacttag ctataggatt taatgttgca ctaccttctc ttggcaatac acccgttgat
     6121 tttaaaaaac tcataaacaa agcttcttta gagtagcttc catcttcatt ttgtggataa
     6181 actgacatat caggattaaa agtatctatt gcagtgtctt tatctaaatt ttgagtttgc
     6241 atactttgcg gagtgaaatt taatggttgt aagcctatat taatatgtcc aaacattcct
     6301 aattgttctg cttcattata ttgctcttgt gtattataat agtttgttat tgttagctta
     6361 ttataatttt tcggcataat acctatagtt ttagatgata attcactaat tcccttaggc
     6421 atagaattta tatctgcttc agtgaaactt gttttattgg tatcattaaa agtatgatta
     6481 acaatttgat taaattgatt atagtattgt tttatggtat cagccatatc gatattggta
     6541 aaatagcgag aaattcctag gtgttctttt atgtcttgat attgtgcttc attaaagtta
     6601 tatatctcat ctaaagtaga tttatgcatc ttaaaatctt caggaagtcc tgcagctttg
     6661 ttaaaatctt ctcccatata accattagca tctactccat aaccataagc taaagataca
     6721 atattgcttg tatctgcttg tttatatttt agagtataaa tagagttttt aaattcactt
     6781 gatatatcat aattaggaga acttgtcttg ctacttatac taaaattagt gttattgcta
     6841 gtatttgttg tattagtaga atttaatact tcacttcttg ctagagtttg tgaatttgca
     6901 ttttgaattt catttaactt actagcattt tgttttaaaa aagcattagc aaaacttatt
     6961 ttggaatttt ctttactttc tttattagtt tttgcttgtg aaagtataga attataattt
     7021 gagttatcat tgatgctaaa gatactcata ttaattcctt aatttagatt tttttgcctt
     7081 caacctaaat atattaaaat aatataagca agatctgttc cgttttgggg tggagttatt
     7141 tttctaaata aatttttaaa gccctttcat agtcttcttt agtatcaatc cccatgcttg
     7201 ttgttgaaat ttcaagcatt ttgatttttt taccattttc tatagctctt aattgctcta
     7261 atttttccgc tctttcaagt gcagaacttg ataaagaaca aaattccctt aaagctttga
     7321 cactataagc ataaatgcct aaatgtcctt taaaactttc ctcgtaattt tctctttcat
     7381 aagggatttt agctcttgaa aaatacaaag catacccttc tttatcacaa agcactttaa
     7441 ccagattagg atccatagct tcttcttgag taattttttt ataacaactc gccataaaag
     7501 cttttttatc caagcaagaa cttgcaaatt ctttaaattt taataaattt tcacattcta
     7561 taaaaggctc atcagcttgg acattgataa taatctcatc atcttttaaa gctagtttct
     7621 tacaagcttc attaatccta tccgtaccac tttcatgatc tttgcttgtt aaaaccgcat
     7681 ttagaccata ttctttagcg atgcttaaaa ccttttcatc gtctaaagct atacaaactt
     7741 catctacatt acttaccctt cttgcagtag ccacaaacat aggcactcca cctatatcac
     7801 ataaaatttt ctcatgaaaa cgacttgatt ttaatcttgc agggataata atcatttttg
     7861 catccaatct aaaatttctt tttttatatt tctggcttca aatacctttt catcgctatt
     7921 tttcaaatca aataaagcca aaatttcatc tttaacttgg acattaaact ctttagctat
     7981 aaattttaaa tcttcttttt cattcttaga atccctatca tataaagctt ttatcatact
     8041 tggagtaaat tttgtccatt ctgctgtaga agtgataatg ctaggtttta aaggatcaag
     8101 cattttaaaa caagttgcgg tatgcggatc gattaaaatc ttgctttgtt tgataaattg
     8161 catacattct tcatcggtgc aaaaatccgc ctcaaaatct tcttgcaaac tttgtaattc
     8221 ttctttttca agtttaaaat atctctcatt ttttaacaaa ttcatcagtt ctttagttct
     8281 tttatcttta aatttcgcaa acaaaagtct ttcgatatta gatgaaataa gtatatccat
     8341 agctggagaa atagtcttct taagactttt ttcacgcaaa tcataaacgc cttgattaaa
     8401 aaattcactc aaaatattat ttgcgtttga agcgattttg atttttgaaa ttttagctcc
     8461 cattttttta gcataaaaag ctcctaaagc attgccaaaa tttccacttg gaacgatgat
     8521 ttgtacttct tctaaaaact cattaaaaag ttttaaactc gcataataat gataaataat
     8581 ctgaaataaa atacgcccaa aatttacaga attagctgcg caaagctcat aatttaaagc
     8641 tttaatttca ttttgaaaat cttttgaaaa aagcaattct tttaaagtgc gttgcgctgc
     8701 gtcaaaatcc tcatctatgg caaaaacttt caagttatcc ttatctaaag ctcgcatttg
     8761 caactcttga actccacttg tgccaccttt tggatacata caagctactt taacattttt
     8821 tgcattttca aagcttttta gggttgcagg tcctgtatcg ccgcttgtag cacaaataat
     8881 taaaatattt ttatcctttg aaaattcact taaaagcacg ccaaaaggct gcaaagccat
     8941 atctttaaaa gctcttgtag gtccatgcca aagctcgtta atataggttt tttcagagat
     9001 tttttgcaaa gaaataggtg tatttttatc atcaaagctt tcgtaacttt tcaaagcctt
     9061 tttaaaaagc tcttcttcgc caaaaccaaa actttctata agctttaaag caaaatcttt
     9121 ataagacaaa ttggcatatt tttctccttc aaaaataggc aaatttaaag gtgagtaaag
     9181 ccctccttct ggggcgtttg ggttaatcaa agcttcctta aaacttgata cattttttac
     9241 atttctactc tcgaccaatt tcactgttca aactccttga tataagtttt tattttttct
     9301 cttaatgaat cttttaattc tatatttaat tctataattt gacatttaaa accaaaatct
     9361 ttaactttaa caaaatcctt aaaagtaagc attagtgtat cgcaattatg tttttttagc
     9421 aaattttcta attcttcttt tttaaactca taatgatctt taaaaaaata acaagccctt
     9481 gctttgataa aatgctcata caatctaaaa ggtttagcaa tagcagttac caaaacagcc
     9541 tttggatttt cttttacaaa agaataacgc acaaaatccc tgccttctaa tgcaataaaa
     9601 tcagcccttt tttcataaaa tttcggcaaa cgataagctc cacttggcaa ggtaaaatta
     9661 aaataaggtt tgattttgct ttcaagtaaa atatcaaatt ttttaatatg aaatttagaa
     9721 aaagcatcat caagtacaac gattttagct cccaactcaa aagctttttc aatacctttt
     9781 actctatctt cgctcacaat cacacctttg atattttctt caaaagcata ctccatagct
     9841 tcatcgccac tttgcgttaa ggtgcataaa atttcatttt gatttttaac aacaaacaaa
     9901 cctttagact ttcttttata gcccctaagc actataaaaa cgccatcaaa ttcccttgct
     9961 atagctttac aaagcggggt ttttccatta cctccaaaac ttaaattacc aacgctaata
    10021 acaggctttt taaaaactat ttttttacga aaaaaagtat ttaaaatcgc aaaaaaagca
    10081 taaaacacac ttaaaggtaa aagtataaaa gcaaggcatt tttgccaaaa attaggctta
    10141 aaaaaataat tatcaagcca aagttcataa tttttttctt cactcattgt ttaaatttcc
    10201 aaaatttcag gcatttttcc cttaaaagta tttttttgca tgcgattttt tagcatagca
    10261 atcaaagaag gatcaagcgt tcttaaaagt ttttcatcat tagtttctaa ggcttttaaa
    10321 ccttcatcga tttttgcata agaaaaaccc aaatccgcct catcgctttg attttcccaa
    10381 agatccgcac ttggagcttt tttgataaaa ttttcatgca agttaaggta ttttgctaag
    10441 gtataaattt cacttttata aagcgatcct ataggattaa aagcacaagc taaatctcca
    10501 taaatcgtac cataacccaa aagtaattcg cttttattag aagtgcctat gactaaagaa
    10561 tttttcaaag cagaataatc ataaagcaaa ctcattctaa tacgcgctgc aaaatttccc
    10621 aaagatacta gagtggtatt ttcactttgc tttataaaag catccaaaat gctttgaatt
    10681 tctatgattt tatattcaag atttaaatcc gcacaaagcc ttaaagcgtc ttcaagattg
    10741 gctttatttg aaatttgagt tggcattaaa agagcaaaaa cattctcttt taaagctctt
    10801 ttgcaaagcg ttgctactaa agcagaatca atcccgccac taagccccaa aacaacacct
    10861 tgactttgag aatttttcac tttttcttgt ataaaatcac acattttttc cgtaatcttt
    10921 tgccaatcca taaagcttgc cttttaaaaa tttaatgtat aattatattt atttaaggca
    10981 aattttttat taaagaggta aaaaatgcaa attatcaaac aagcttgtgg agcttatgag
    11041 acaaattgtt atattttatt tagtgagcat ggagaaatta tcattgatcc tggttttgat
    11101 gcactaaatt tcatcaaaaa acatgtaaaa aatcctttag cgattttaaa cactcacgga
    11161 cattacgatc atgtttggga taatgaaaaa gtaaaacaag cctatcaaat ccccatttat
    11221 attcataaaa atgatgcttt tatgcttgaa gatcctttta atcaaggttt tatgcctagc
    11281 aaagcggatt atttgattga tgatgaaaat atcatttcta taggcggact tgactttaaa
    11341 tttcactttt taccaggaca cacaccaggt tgcactatga tagaaattgt aggtaaaaat
    11401 atcatgttta gtggagattt tttattttat agaagcatag gaagatggga ttttccttat
    11461 tcagatgcaa atttaatgaa acaaagctta gaaaaagtta tgacttacaa agaagatttt
    11521 aaacttttac caggacatgg acaagagact actttaaaag aagagcaagt ccatctaccc
    11581 tcttggctta gatactttta aggtatattt aaaatggaat tagatcaaat tttattatat
    11641 gcttttattt ttttaaatct ttttgccttt tttggtttat ttttgggaaa taaaaagaaa
    11701 aatcaattta acgataaaaa attttataaa atctgcccat gtaaaaaaat ggcagaaaat
    11761 ggatctttaa gtacgatttg tatttattca gctgtgggag gattttttta cagcgtatta
    11821 tctataggtt ttgtaggttt tggcaattgg actttaaatt ttattttttt acttgcatta
    11881 ttaagtgttt ttttaggatg gaaattaaaa cttgattgaa aaatattttt aagaaaaatc
    11941 cattgatttt tcttaatttt tatttaaaag ttgtaccacc atcaacgatg aaagtatgtc
    12001 ctgttaccca acttgcctta cttgaacaaa gaaaaagaca cgctccagcc aaatcctcag
    12061 gctgccccat gcgatttaaa ggacttaaat ttatagtagc ctgttttact tcttcataat
    12121 ttgtaaaagc tcttaaagca tcagtttcaa taggcccacc acttacgaca tttacacgga
    12181 tatttttttc tccaagttca gtagccgcat atcttgccat agcttctacg gcagcttttg
    12241 ctgtgccatg acctgaataa ttttctatat acactaaatt tcctgtagat gagatagaaa
    12301 taatgcttcc accccctact ttttccattc ttttagctgc ttcttgtgcg cccacaacaa
    12361 aagcatttac tgtggctgta aagatgttat taattccttt tggttttaat ttcataaatt
    12421 tagtataacc acctacaacc gcacgtcctg aaatgatagc atttgagatg aaataatcca
    12481 ctctatcaaa atccgcatca attttttcaa aaagttcttt ataagtttca ggttctaaga
    12541 tattaaattc ataagctcta gctttaattt tataattttt ttccaaatct tgtaccattt
    12601 catcagcaat ttgtgcatta gaattataag taaaagctat atttacaccc actttagcaa
    12661 attcataaac tatagcctta cctatcccac gagttccacc gctgattact aaagtttttc
    12721 cttgaaattc tgtattcatt aaaatccttt gatcttatat tttttcatca cttcttcaat
    12781 tttagcaaaa ttttccttac ttggaggaca aagaggaagt ctaaactcca aactttctat
    12841 caatccagct atatacatag ccgttttaat aggaatagga ttactttcgc aaaataaaat
    12901 tttattgata ttataaagtt catcattgat ttttttagct tctttataat tttcatctaa
    12961 agcgaaatga gttaaagcgc taatcatatc gggtaataaa tttgaagtta ctgaaataac
    13021 tccctttccg ccatttgaaa gtataggata attgatcgca tcttctcctg aaataagcat
    13081 cattctaggt tcgtgcgcaa gcaaatccac acacttatcg atatttccac tcgcttcttt
    13141 taccccataa atattttcac aatctctaaa aagcttgata atagtatctg ttgaaatttc
    13201 acaacctgtt cttcctggaa cattatataa aagcacagga atatctacac tttgcgcaat
    13261 agccttataa tgctcataaa gtccttgttg cgtaggttta ttgtaatacg gtgccacact
    13321 taaaatccca tcggcaccat gttctttagc aaatttagcc aaacccactg cctcatgagt
    13381 tgcattactt cccgcacctg ctaaaacctt aaccttagtt cctttgcaag tttcaacggc
    13441 tatttctatg caagttctat gttcttcatg ggttaaagtt gcactttctc ctgttgttcc
    13501 tactggaact actgcatcga tgccattttc tatttgtctt ttaatcaatc ttgcataact
    13561 ttgctcatca acttttccat ttttaaacgg tgtaataagg gccgtcatcg ccccaatgat
    13621 aatattttta tccatttgaa tcctttctta gaattaccgt agttgaattt tcttgaataa
    13681 aatatttttt agcacaagaa atcaaatctt ttaattccaa attttgtata tctttctcat
    13741 aatttaacaa aggatcgata tcccctcttg ctagatatga accataaata tttgccactg
    13801 cactagcatt gttaagtgag aaaataaaat cacttttgac attatttttc actctttgca
    13861 aatctttttg agaaatttta cccattttaa gtttatcaat gatttttaaa agctcttttt
    13921 ctactttttc tgcattaaca ttggggttac aattacaaat aaaaataaat aaattttcat
    13981 ctatacaatc attaacataa gcataataat cattgattaa atttaattta tcaatcaaaa
    14041 tttcactcat taaagaactt ttcccacttc ctaaaagctc ggataaagca tttaaagcag
    14101 gtatatcttt gtgcttgaaa tttggaattt tataagcaag ggctaatagt tcagtatctg
    14161 agtttttatg caaatatatt ctttttactc catcttgctt aggctctttt gtgtgaattt
    14221 taggtatagt cctagtattt ttaatctttt caaaatgttt ttttgaaagc tcaaaaactt
    14281 ctttactttc tatatcgcca cttacaagta aaatcgcatt tttaggttga taataaatac
    14341 tatgaaattc tttaatatct tcaatgctcc aattttctat atccttaaaa aaacctatag
    14401 gagtccaatg ataaggatga tacataaatg catgattaaa aagtctaaaa taaagatatc
    14461 ccaaaggatt attatctgtt ctccatctac gctcttctaa aaccactgct ctttcaggct
    14521 gaaattcttc atcttttaaa tttaaatttg ccataagttc tgcaaaaagt tccaaagctt
    14581 tatctaaatt tttcttcgca catttaatat aataatgagt atagtcaaaa cctgtgcttg
    14641 cattatccac accaccaaaa cccttaacaa tctcatcaaa ttcgccagct tttaaatttt
    14701 tagtactttt aaaatttaaa tgttctagca tatgagctat gccgcttttt cccatgatct
    14761 catttcttga acccacttta taaaaaatat caacgctaat cacatcgcta tttttattta
    14821 caggtaaagc ataaacttca agcttgtttt ttaattgaat tttttcataa gcaatcattt
    14881 taaatttacc ccaacagctt cgctaatgtg taaaaaacca tcttttctta aaagctctat
    14941 aagattttga ttgatatttt ttaccaaaga agggccttta aaaatcaaag ctgtataaac
    15001 ttgcactaaa ttagccccat ttttaatacg ctcataagca atatcagcac tatcaatccc
    15061 tccacttgca ataagcaagg ttttgccaaa aagaatttta gctacttctt tgaaaaaaat
    15121 accacttttt tccgtaatca gccttccgct aataccacca aaagtacgat tattatctag
    15181 caagctataa tcaacactag tattggctaa tataaaccca tctgcacctt ttttaatggc
    15241 attttcacat aaatttaaag catcatctat tttcatatca ggagcaattt ttatcaaaat
    15301 aggcttagaa gtgatttttt tggcttcttc aagcaaggta tttaaaaaat catcattttg
    15361 caactctctt aaatttttag tattaggaga tgagatatta acgataaaat aatcacacaa
    15421 atccttaaaa tctctaaaca aagtaaaata atcctccaag gctttatcat ttggagtgat
    15481 tttatttttc cctatattta cccctaaagg caaaacaaaa ggataagttt ttgcaagtct
    15541 taaagcaatc ttttcagcac cttcgttgtt aaaacccata gcattttgta tactttcttg
    15601 ttttacaagt ctaaataggc gtggcttttc attgccttct tgaggttttg gagtaaaagt
    15661 tcccacttct aaaaaaccaa atcctaaagc actcaaaggt cttatcatag tggcattttt
    15721 atcaaagcct cctgctaaac ctacaggatt attaaaatca agtccaagta aattttgcct
    15781 taaactctca tcatcaacta tatatttgtg tgctaaaaaa cttaaagctc ctggaaaact
    15841 agcacttaaa gcccttaagc tatattcaac caaagcatgt gcatgctcag ggtttaactt
    15901 aaaaagtaaa ggttttatca tttcataagc cattttttaa tcctttttga aattctaact
    15961 aaaattaact aaagctaggc tttgtttttt ctttgctttt aaatttttga tacaaagaac
    16021 aagtttgcaa aagctcttca tctttaccta ttgccaatac cttgccctta tccaatacta
    16081 ctattttatc tgcattttct atagtgctta aacgatgtgc aaccactaaa atcaatctat
    16141 cttgttttaa attttctata gttttaacta ttgctttttc actttcatta tccaaagctg
    16201 aagttgcttc atcaaaaata agcacatcag gatttttata taaagctcta gcgattgcta
    16261 ttctttgttt ttgccctcca cttaagttct taccatgttc tttcacttca gcccaaatcc
    16321 cacccatttc tttaacaaat tcataggcat tggccaattt taaagcttgg atgacttttt
    16381 cttcttctaa ctcttcgcta taagcaatat ttgcagcaaa actatcatta aaaagataaa
    16441 tattttgcgt tacaagtcct attttagcat gtaagctttc tatggtaaaa gtgctaatat
    16501 cttcttgatt gagtaaaatt ttaccttttt gcttttcata aaaatacatc aaaagattaa
    16561 taatagaaga tttaccaccc ccacttgtcc ctacaagagc aagcatttgc cctttaacaa
    16621 aatcaaaatt tacgcctttt aaaacacttt tatgcggatt ttcataagca aattcaacat
    16681 tttcaaagct aattttttca atgtttttta attctttgct tccaccttta atttgaggtt
    16741 ctaaatccaa taaataaaaa gttctttcac ttgccgcaac agcaccttga agttttccat
    16801 ataaagacga aagacgcttt aaaggagtat atatcgcaaa aagtgccgaa acaaaactga
    16861 taaaacttcc cacactcata gaaccattga taacctctct accccctaca ataatcacca
    16921 cagcaacccc aacagaaccc atcatatcca ttaaaggact tgtaagtgca tcaatacgtg
    16981 cggattttag gtttaattta cataaagtat cattatgctt agcaaattta tcactttctt
    17041 ttttttcatt atcattagct ttgatcaatt caatatttga aaaaatttca cccaaataag
    17101 aaagtaaatc cgaatttgtt tcttgtatat ttcttgcata ttttttaagt tttttagcaa
    17161 accataccaa aggaaaaata gctaaaggca aaatcactaa agcaaaaaaa gccaaagtag
    17221 gactttgata caagactacc gcaagcagtc ctatagcagt taaaagctct ctaaaaaaat
    17281 caggaataat gtttgatact atgctttgaa gtgcattaat atcattagta caacgactta
    17341 caagctctcc gcttctatag cgtttaaaaa aatccatatc caagcgtaaa acatttttca
    17401 aaaccctagc acgcaatact cttaacatat ctgttcctat aaaggaaaca taaaaacttt
    17461 gtaaataagt tccaagattt ttaaaaaaat acatcaatac tagcaaaaaa ggcactgtat
    17521 aaagtaaagc ttcatttttt tcaacgaaaa tataatttaa aataggctct aaagcataaa
    17581 aacttccagc agttcctccg cttgctaaaa tcataccgaa aatagctata gcaaattgtt
    17641 tccaatatct tttataaaag ggcttaaagc gtattaaaac ctcttttaaa ttcatctcat
    17701 tatgcattta ttttctccca aattgttcca tttggagtat ctaaaagagt gattttttta
    17761 ctacttaatc gctctcttat tgcatcagct gtgttaaaat ctttgttttt cttagcctca
    17821 gttctttcta aaattaactt ttcaatttct tctcgttctt ctttgcttac accccattga
    17881 aaatataaag ttgtatccat aaaaccaaag ccaaaaattt tagctagctc gcttaaagct
    17941 tctttgatat tttgttttaa aattttattt ttgctttctt tatccaactc taaatttgca
    18001 ctactgataa aatcatccaa aagagctaag gctttagaaa tatttaaatc atcatttaaa
    18061 atctctaaaa tttgcttagc aatttcgctt tttatttcaa tatcatttaa aacatcaaaa
    18121 tcagaaattt cacctaaatc caatcttttt ttaaggcgat aaaatttatc taaacgtttt
    18181 ttagcatttt ctaaatccga taaagaataa ttaaaatgag atctataatg agaactcaaa
    18241 agataaaatc ttaaagcctc gcccataaat tcttttaaag catcttttat aaaaaaacta
    18301 ttatttaaac ttttactcat tttttcacca tcgattttta caaaaccatt atgaagccaa
    18361 atatttgcta attttctctt acatccacaa cgacattgcg cagcttcatt ttcatgatga
    18421 ggaaaaagca aatctatccc tccagcatgt atatcaagag tattttcaaa aatagaatca
    18481 atcatagcaa cacattcagt atgccaacct ggacgccctt tgccaaattc actttcgtaa
    18541 aaattttcat caaatttcca aagcacaaaa tcgctttcat ttcttttttg cacttcatta
    18601 cttagacgag agatattttc ttctaaattg cgatttgata ggcttaaata tttttcatct
    18661 ttacttgtat caaaataaat tccatcttct agagtataaa caaacccatc cttagcaagc
    18721 tttttaatca aatcaagcat agctgttata taatgcgttg cacgaggttt aaaatcagga
    18781 tctaatacat ttaaaaccct catatcctct tcataacttt tgatataaaa ttccgtaatt
    18841 tcctctaaag tttgaccact ttgagccatt tttttcaaaa tcttatcatc aatatctgta
    18901 taatttctag caaattttac cctattgcca ttagcaagta aaaccctacg caaaagatca
    18961 aaacaaacac tacttcttgc atgtcctaaa tgtgcatcat cataaaccgt aggcccgcat
    19021 aagtaaatac taatatcttt tttatcaagt tttattttct cttttgctac actgtctaat
    19081 aatctcatta aaaaactcct ttaaaacttg taaaaattcc tataaaaaaa cttaaaatat
    19141 aaggtttaat caaaataagt aagattgtaa aaacaatcaa agcaactata accaacaagc
    19201 aaattttaat agatattaaa gcaaaaaatt tcttaaaacc aaattctttg atattagctc
    19261 caagcaaata aaaagcacta atagagcttg aaagtgctac tgcaataacc tttaaacttt
    19321 catctttaat caaaaatata aaagccatag aacataaagc actgataatt aaagatttta
    19381 ccgcgatcca agctgctgtt ttttgtttaa attttgcata aagccacaaa gaaaaaagct
    19441 tttgcaaacc aaaaggtaaa agccctataa gataagcaat caaaacataa gccgtaatca
    19501 cactatcttc gtgagtgaaa tttcctcttt caaataaaag ctttgaaatt tccaaagcaa
    19561 acgcagaacc tataatacta gaagcaataa gcaaaatgct taaaaacgct aatgctcttt
    19621 gcataaattt taaggctaaa ttttcttgac cactttttaa atgttttaaa atttttggaa
    19681 aagaaacttg agttagagcg atagcaaaaa gtgcaagggg gagttggaag acacgatttg
    19741 cataataaag ataagaaata ctcccgctca ttaaaaaact agctatagtt gtatcaagca
    19801 atgagctaaa ttgagtcgca gaagaaccta aaactccatg aaaaaaattg ccataaaaac
    19861 cttgtaattt cgccttggct tttttaaatt ttatacttaa agccatagca cggattacag
    19921 gattgttttt taaaacaagc aaatgtaaaa taagctgtgc caccccgctt aaaaccgttg
    19981 cataagaaaa ataataaagt gtattttgcg gtgcattttt atccacaaaa aaggcagcta
    20041 taacaatact taagttaaat aatgccgcag aaaaagaggt aatgaaaaat ttttgtctat
    20101 aatttaaaat agctcctaaa aaagtaacta aaaaaataaa aaacaaatac caaaaattaa
    20161 tcgccaccaa aggagccgct aaagctatag tatctgcgtt aaacccaaaa gcaaaaagct
    20221 tagtaaaaaa agaggaaaaa aaacttacca aaagacaaaa taaaaaaact ataaggctaa
    20281 attgcatcat tacactaaca caaaaagctc cttttttttt cgcttttaca aaattaggca
    20341 aaaaactttg tccaaaagcc ccttctgcaa aaattcttct aaaaaaagca ggcattttta
    20401 aagccacaaa aaaaatatca ctataaagcc ctgctcctaa aaaaagcgct attaaaacat
    20461 ctctagcaag ccctaaaatt cttgaaaata aaattcctaa agcattgata ataaaatttt
    20521 taaatactaa actcttcatt aaattttttc ataaatttca aaatataaag agaactattt
    20581 taactaaaat tgattaaaaa ttgactataa ttacattctt aattttttac aaggggaaag
    20641 ttttggcttt ggatgaaaaa attattgcct atacagaaaa tccagctcga gagcttttaa
    20701 gcgtagcttc acgaacaaac cttagcttaa atgagcttga ttttagttta ttggcatttt
    20761 ctacacaata tcgttttgga gatttagaat gggaaaaaat ctctgaaaaa gaattaactc
    20821 tttttgataa agatgaaatt tttttaaaaa atgatcttca aatcaagcaa gaatacaaaa
    20881 tagaaatttt ccacggtata aaccaaagca aagcatctca agcagtcaaa ctggttgcaa
    20941 ataaaaattt aaccaaaata gttgctcaaa ttgattttac aaatttagac tttcatgaaa
    21001 aactagcact agaacttttg caaaatattt ataaaaagat gttgaaactt aaatttttaa
    21061 taggtatccg catttttgat tttaagaaaa atttaatgtc tttttgcaat caacataaaa
    21121 acaccccttt aaataaaact atacaaatca ccgttgcaca aggtattgat cctatagaaa
    21181 gtcaagatga atccctgatc ttgacttata aagaaaaaac caaaaactac actatcgatg
    21241 aaaaacgctc aggtattatt gttgttgatg aaaatgaagt tgttttaaaa cacgccaaat
    21301 ttaaacaagg taaagaagga aaagacttaa atttacacac cttaaaagtt ttagccgcaa
    21361 atgaaaataa agttaaattt tcttgttctt cggcttttaa acaagtagag caagatggat
    21421 acacagaata tatagcttta aaaaaaggtt atgtagtaca agatggtgaa aaatttgata
    21481 ttgccaatga actagatttt aatggggtag attttaaaaa tatagggatt ataagagctg
    21541 gactagacaa aaatgtcaaa atcaatataa aatttctttc agaagtaaaa gatgctgtaa
    21601 attctggtgt tgggatagaa tgtgaagaat taaatgtagt cggaagcgta ggaagcaaca
    21661 ctcaacttaa tgccactaaa atgaaaattg aaggcactac acactctaaa gccaaaattc
    21721 aagccaaaca agcctatata aaaactcata gaggatttgc ggaagccgaa attttaaata
    21781 tagatttgct cgaaggtgga acaatcaaag ccaaagaagt gagaattaaa aaaagtttag
    21841 gcggaaatat acaagctgat aaaatctata tagaaaattt agaaagtaat aattcttgtg
    21901 tgttttttga aaacaccaca atagaacgca ttaacgggga taacaataaa tttcatgcta
    21961 aaattaaaac tcttgataaa aattatgatg aagaatttgc gattttagga gagcaaattt
    22021 ctaagttaaa tcataaaata aataaaataa gacaatacat tttatcaagc aaaaatggaa
    22081 ttttaagcgt tgaaaaaaag ataacagaac ttaaaaatca aggtcaaaat gttcctgtac
    22141 aatacgaaaa agccctaaaa gatttctctt tacaaaatct tgaattaaat aaactacaaa
    22201 atgaagaaaa agaacttctt gaacgcaaaa aatctttaca attagaatta atcaatttgc
    22261 aaaaaatgct ttttgaagca acttttataa ataaaagcgg caaatggact gatatgaatg
    22321 aaatcaaatt ttcacttcta gagcctaaag aagatatttt ttactcttca tttgttaatg
    22381 aaagtgctaa atttataggc attaaaaaag tcatacaaaa caaccaagaa agtatagaaa
    22441 tacataaaaa attagattat gaagaaaagg atatagcatg gttgtcggca tcgaaggaat
    22501 aatcacaaaa aaagaaccta cttttatcat tgttaaatgt gctagtggtt taagctatgg
    22561 gatatttatt tctctttttt gttctgctaa aattcaaacc caagaaaagc atgagttttt
    22621 tatcactcaa atcatcaaag aagattctaa taaattttat ggcttcttgg ataaagatga
    22681 acaaaaaatg tttgaaatgc ttttaaaagt caatggagtg ggtgcaaata ctgctatggc
    22741 ggtatgctct agtcttgatg taaattcttt ttacaaagcg ttaagtttgg gcgatgaaag
    22801 cgtgcttaaa aaagtacctg gaataggtcc aaaaagtgca aaacgcatta tagtagaact
    22861 ttctgacaca aaaaccaaac ttgaaaatgt aagcgatgat aaaagcgaag ccttagccgc
    22921 acttcttact ctaggcttta aacaagaaaa aatcataagt gttttagcaa gtgctcaagc
    22981 aacaggaaca agcgaactca tcaaagaagc tcttaaaaaa ctaggataaa ggaataaaat
    23041 gaaatttgca atactttttg gcggaaattc ttatgaacat gagatcagta tagtaagtgc
    23101 tgtagtactt aaaaaagtta tcaatcaaaa tttagaattt gttttttgcg atgaagaaag
    23161 aagattttat cacattccaa gcgaaaaaat gaattctaaa acttttagca ccaaagctta
    23221 taaaaatgaa aaagaactct tcatcaaaca aggaggtttt tttagcaaag gctttttaaa
    23281 agaaaataaa ctagagtgcg aatgcgtgat caatcttatc catggtagag atggagaaga
    23341 tggaaaaatt gcggctttat ttgagtttta ttctattaaa tttataggac ctaggcttga
    23401 agctagtgta ttatctttca acaaagaact taccaaactt tatgccaaaa gcgttggtgt
    23461 aaaaacactt gattatacca tgctaagaaa aaatcaaaac tctaaagaaa agcttagttt
    23521 tccttgtatt atcaaacctg caagacttgg aagtagtata ggtattagca tagtaaaaga
    23581 tgaaaaagat ttagaatacg ccaaagatgt aggttttgaa tttgacaatg atcttgtagt
    23641 agaagaattt aaaaacaata tcaaagaata caatcttgca ggatgtatga tcaatgatga
    23701 gtttgttttt tccattatag aagagccaaa gaaaaaagaa tttttagact ttgaacaaaa
    23761 atatcttagc ttttcaggac acaatgaact tatagaagcg gatttaagcg aagaattaaa
    23821 agaaaaactc aaagacagtt ttaaaaagat ctacaatcct ttgtttaaag gtgctttaat
    23881 acgctgcgat ttttttatac tggataatga agtatattta aatgaaatca acccaaatcc
    23941 tggttctttg gctaattatc tttttaaaga ttttaatacc actttaaacg ctttagctga
    24001 tcaaatttca cttgaaaaaa tgataaaaat caattacaac ttccttcact ccatcaacgg
    24061 acaaaaagga aaattataag cttttaagtc aaaatacgct aaattataca taaaatttag
    24121 cgtattttag gaagaaaaat gctctctttt aaacaagatg aaatttacac tgccaccgaa
    24181 gtggtaagaa attttagccc cattatggaa aaactcaaaa aaagcgaaag tggaaaaata
    24241 gttattttaa aaaataacaa atttgaagct gtaatgctta gtatgaaaga atttgaacgc
    24301 ttacaaaatg ccatgcaact tttagaaaat atctacaaaa atcaaaaggc ttaaaatggc
    24361 tcaaactcaa ctttcttata aaaacaaaac ttatcaaatt tcttatgaaa ttttaggtga
    24421 tctttcctta ccgcaaatac ttatcttaca cggctgggga gccaataaag aacttatgaa
    24481 gcaaagtttt tgtccttttt tgaaagattt ttgtcaaatt tatatggatt tagcgggttt
    24541 tggaaattca agcgtggaag aaattttaaa cactcaagat tatgccaata tcacagaact
    24601 ttttttaaaa caaaaaaaac tcgatgtctg ttttttcatg ggacattctt ttggtggaaa
    24661 agtaagtacc ctactcgcaa aagaaaaaga cactctaatc ttactttcaa gtgcgggaat
    24721 tttggctaaa aaatccctaa aagtgcgttt taaaatccgt atttttaaaa ttttaaaact
    24781 ctttggtttg gggaaatttt atcgctattt tgctagtaaa gatggagtaa atcttagtcc
    24841 tatgatgtat gaaaccttta aaaaggttgt tgatgaggat tttagtgaaa tttttgccaa
    24901 gcaaaaggct aaaagcttga ttttttgggg aaaaagcgat gaagctacgc ctttgtattg
    24961 tggtgaaaaa atgcatgaac ttttaaaaaa tagcactttt tatcctttag agggggatca
    25021 ttttttcttt ttaaaacatt ctgctttcat agctcaaaaa atcaaggaaa tttaaatgct
    25081 tatcaatgct ctttattttg tcaattcttt attttttaat ttttgtatag ctttttatct
    25141 tatgagtgct ttacaatggt attcttataa atttaaacgc gtgttttttc attatcataa
    25201 acctttgtgg catttgtatt ttttatttat tccttatttt ttattcttag cttttccttt
    25261 atattctttg gcatattttg cattgatcca tactccgatt ttgtattttt ggagcaaagg
    25321 tatagataaa aagcttgttt ttacaagtaa ggttaaatgg ttttttgttt ttgtttttgt
    25381 ttataatgct atttttgcta tacttgcttt gcgtttttct tttcttttta atctttttag
    25441 ccttcctttt gctttattta gtcttaaaat ttatgagttt tttacaaatt tatattataa
    25501 aaaacaagcc aaagccaaat taagagccaa tgaaaattta aaaatcatac tcattaccgc
    25561 aagttttgga aaaacaagta ttaaaaattt tctatacgaa cttttaaaag atgactttaa
    25621 aagctacaaa acaccacgct ctgtcaatac cttgctaggt atagttgctg atatcaatac
    25681 caatttaagc caagatactc aaatttacat agctgaagca ggtgctagac ttaaaggcga
    25741 tattgatgaa atcactcgtt ttttacaacc tcacatcagc atagtaggag agataggcaa
    25801 tgcacattta gagtatttta aaagtgttga aaatatccgt tcaaccaaac ttgaagcctt
    25861 aaattccaaa agactagaaa aggctttttt acactctagc acccaaaaag aagaagataa
    25921 actcatcagc ctttatgatg ataaattaag tcttattcat tcaagtcttg aaggtttaga
    25981 atttaaaatc gatatagaaa ataaatccta tgattttaaa agtcaaattt taggggattt
    26041 taacgcgcaa aatctttgtg tttgtatact ttgtgctcat tatcttggta taaagctaga
    26101 aaaaattcaa aagcaagttt taaatataaa ctccgtagaa catcgcttgc aagtgctttc
    26161 aagagagcct aaatttatca tagatgatgg ttttaatgga aattttaaag gtatgagcac
    26221 aagctatgaa ctttgtaaaa gctataaagg acgcaaagtt ttagtaagtc ctggtatagt
    26281 ggaagtaagc gaagaagaaa atataaaact tgctaaaatc atcaatgagt gttttgatct
    26341 tgctatcatt agcgcacaaa tcaatgctga aattttcaaa aaagagttaa aaataaaaac
    26401 cattatactt aaagaaaaaa gccagctagt tcaaactcta gctaaagaga caaaaaacgg
    26461 agatttaata ctcttttcaa acgatgcgcc tagttttatg tgattcgtat aagtatttgc
    26521 aaatgtcatc attttcaatt tgacttcgtg caaatacttc tttaagccct agtttgtcct
    26581 ataagattat ttaatctatc cattatagaa tcagcgtagg aattaatggt gctaggtttt
    26641 gctttccagc cattggcaat ggcttgttta atttcagcat ctaaagccca attacccata
    26701 gcagattctt tagaaatgtt attttcatac atataaagtt gcccttctaa ttttccattt
    26761 ttactagcta gatatttaaa tagacttgca aaatctactt tgcctgtcat aatatcacct
    26821 atatctacac tagtagttga aaaactctct ttagccatag ctctattgta agcttctatt
    26881 gttggattaa gtgtggtttt tggactctca acaggttgtc cattttgagc ttttaaaaaa
    26941 ctcataaaca aagcttcttt agaataactt ccatcttcat tttgtggata aactgacata
    27001 tcaggattaa attgccaatc ttcaccttta gaaacatttt tgatttcttc taaggataaa
    27061 cctaaagttt taggcaataa tccatcaatc atatatcctg aatcaaccca aagatcatca
    27121 gcttcttttg cttgttcatg ggttttataa acatttgaaa ttaaagaatt tgaaaaatct
    27181 tttaaacctg taatattcat tctattattt ggatcattaa aattcataca tttatctcca
    27241 cctacagcat atccactagg catagaattt atatctgctt cactaaaact tgttttatca
    27301 cttggaaaac tttgacctaa agcattagaa aaaagattgt agtattgttt tatggtttca
    27361 gccatatcta tattagaata atatttatct acacctagat attctcttat atcagaaaca
    27421 ttatattcag ccactctctc tatctcatcc aaagtagatt tatgtatctt aaaatcttca
    27481 ggcaatcctg cagctttgtt aaaatcactt cccatatagc catctttatc tacactataa
    27541 ccataggctg tattattact tatatctgct tgtttatatt ttagagtata aatagagttt
    27601 ttaaattcac tagatatatc ataattagga gaacttgtct tactacttat actaaaatta
    27661 gtgttattgc tagtatttgt tgtattagta gaatttaata cttcacttct tgctagagtt
    27721 tgtgaatttg cactttgaat ttcatttaac ttactagcat tttgttttaa aaaagcatta
    27781 gcaaaactta ttttagaatt ttctttactt tctttattgg ctttactttg tgaaagtata
    27841 gaattatagt ttgagttatc attgatacta aagatactca tattaattcc ttgatttaga
    27901 tttttttgcc ttcaatctaa atatattaaa ataatataag caaaatctgt tccgttttgg
    27961 ggtgaaaaga aaatatttat cacaccaaag gcaaggtaaa ataaaaattc ttaggatcgc
    28021 tttgaaaact taactctccc ttatgagcgt ttatgatttc tttagaaaga gacaagccaa
    28081 gcccattgcc tttaagtttt gttgttttaa aagcttcaaa aaccaatttc tcatctttta
    28141 tttcacaacc attatcatac actctgatgc atattttttc attatcacaa cttgctaaaa
    28201 ttttaatcat aggcttttca cattcgcttt cttctatcgc atcaatagca ttataaatca
    28261 aattttgcaa aaccaaacca agaagagctt tatcagcaca aatctgctta tccaaaaaag
    28321 atatttcaaa gtctatttga gaagtgaaat tataagagtt aatggcactt tcacactctt
    28381 cttttaactc taaaagatta aaatttaaag cattgatgtg cacaccctta gtaaaaagta
    28441 aagttgaatt tacgatacgc tctactctag caatagcctt ttggatttca agaactatat
    28501 gcttattttt aagctcacta cgagcaaaaa gagttgaagc aagtaaagat atagatccaa
    28561 taggatttct tatctcatgt gccaaatgag ccgctacact acccatactt gcaagccttt
    28621 cattgcgttt ttcatcgcta atatctatag ctgaaactat agttttttca ttatgtgcta
    28681 tgatttttac cgcataaaac ctaccttcaa attcaagctc atcacgaatt ttatccagac
    28741 taatgatact aagtaatttt ggatttttca aggcttcttg attttgtaaa ataatatttt
    28801 tttctttatc taaaatccaa agtgcactag gcaacacctc tataatctca tcaaccattg
    28861 cgcgtaagga attatagttt tcatttaaag ttttgtattc attttctatt acataagttt
    28921 gttctataag actttctaag cctttttgta gggtttcttt ttcatttgag tctaaacttt
    28981 ttaaaatact ttcattcatt tatcattcct ctaataaaat cttaaaatca ttcaaatcaa
    29041 gtaaaagcaa attctgttca catattttat caaattcctt gctaaaacca ttttttgaga
    29101 ttataatgta ataatttgga gccaaattta aagactttgc ttttgatttt aaaagattta
    29161 aaatattttt acaaattttt ttatttttaa atttaacctc tccgacaaaa cacaaatttt
    29221 catcttgata ataaagatca agttctaaat tcttatccca gtaactttgc actccattga
    29281 tattgaattt tttctcaagc aattctctag aaagctgttc aaaacaaaaa ctttgataaa
    29341 gttcaaattt ttccttaata cattctaaaa cttctttata acgattttgc aaaataagct
    29401 tttcattggg ctttaaaaaa taaaaaaaga aacgagtaaa atggctgcta aatataatct
    29461 tatcttggac aacataagat cttagttctt ttttgatttt ttgtctttta tcttttattt
    29521 ttttagcttc cttactatac tcaagtttta ttatacctgt ttctaaaaga tatttaagtg
    29581 tagataaagc tttaaaatgt tgaatttttc tattgataga aaaacgctta cgattgtttt
    29641 tagctagcaa agtaagagcg taagaacttg tttcatccaa ggcaaaataa cttttaattt
    29701 ttagataatc atcaagcaaa attcgctcta tatttgtaaa tatatcgtct tcaaaattta
    29761 aaatgtttaa tttttcaaaa ccttcaaaca cactataaaa atcaaaaagc ttgcttaaag
    29821 acaaattctt atgcaaatct acaaagttct taaattttat atttttcctt ttataaagca
    29881 tttttatagt ataattttag caaattttta taaggattgt atttgcaaat ttcagattta
    29941 aaaaaagaat tgatcttaaa aaaaggtatt ttgcattttg acttcacagc aagtgcttta
    30001 gctctaaaat gcgtagaaaa agaaatttca aaaattctcc caacctatgc aaatacacat
    30061 tctgatagct ctttaaattc ttttaaaact caacaaactt acgaacaagc aagaaaagat
    30121 ataaaaaaaa gtttatcatt agatgaaaat tttgccctta tagcttgcgg aacaggatca
    30181 agcagtgcta ttaaaaaatt tcaagaattg atcggcattt acattccccc tcttgtaaaa
    30241 gaaagatatt ttacgcaaat cgataaaaat accttacctt tagttatcgt agggccttat
    30301 gagcatcatt ctaatgaact ttcatttcga gaaggcttat gtgaatgtat tagaattccc
    30361 ttagataaaa atggagaaat tgattttgat tttctagaaa aaactttaca aaaaaataaa
    30421 aaaagaaaaa taatcgctag cttttcttta gcttcaaatg ttactgggat attaagtgat
    30481 tacaaacgca tttctgaaat ggttcgtaaa tttaaaggga tagttgcttt tgatgcatct
    30541 agtttcattc cctataaaaa catatcttgt caatactatg atgcgttgtt tataagttct
    30601 cataaattaa tcggtggtat tggcggttct ggacttttag ccatcaaaaa agatctttgt
    30661 ggaaacaagc ctagctttgc agcaggtgga actgtgggct atgtttctcg cacttcacaa
    30721 tgctaccttt gtaatgaaga agctttagaa gaaggaggaa cacctggaat tttacaactc
    30781 attcgcgcta gcttagcttt taaaatcaaa gattctatag ggattaaaaa tatagaaaaa
    30841 aaagaagaaa ttttaaaaga ttattttttt gaaaaactaa aaactatacc taatttaatt
    30901 ttatatgcaa agaatttaaa aacccgattg cctatttttg ctttcaatat caaaggaatt
    30961 tctccttttg atatcgctta cgaacttagt aaaaaatacc acatagaaac acgcgctgga
    31021 tgtgcttgcg ctgggcctta tggtcatgat ttgctaggct taaaagacaa tcaaaaactt
    31081 aaaacaaaac caggttggtt aagaataagc ttgcattata cacatgaaaa agaggatatt
    31141 gattattttt ttaatgcttt aaataaaact atagtaaaat tatcgcatta aaatattata
    31201 gttttattat tatgtataaa aattctatct tcaaaagcca aatcaagtgc ttttgaaaga
    31261 acatcttttt ctatatttct acctgcttgt tgcatatctt gccaagtaaa ttcatggttt
    31321 acaggtaaaa cagcttgagt gataatagga ccttcatcaa gattattatt tacaaaatgt
    31381 gccgtagctc caattatttt aacccctctt tcaaaggctt gtttataagg atttgctcct
    31441 ataaatgcag gtaagaaaga atggtgaata tttataatct taccttcaaa atgcctaaca
    31501 aaatcaggag ataaaattcg catatatttt gccaaaacca aataatcaaa tttatattgt
    31561 tcaagacatt ttaaaatctg attttcttgc tcttttcgat ctaaattttc agcgctgata
    31621 aaatgataag gaatttcaaa tttctcaact aaatccttta aagagttgtg atttgaaatc
    31681 acagctttga tatttgcttc aagttcgtta ctataatgct ttattagcaa atctcccaaa
    31741 caatgacttt ctttagtagc aaaaacaaca atatcttttt ttctcttctc gcaaagctct
    31801 atcaaggctt cttgtccaag catagcctca agcgttccta taaaagcttc tttatcaaac
    31861 tcaccttcta aaagagcacg aaaaaaaaac attccttcgc ctacaaattc atcgtttttt
    31921 actatattga tatgatattt aaaaataaca tcagaaattc tataaattaa acctttttga
    31981 tctttggtgc aaatttttaa tacagaaatc atttaactaa accttttata tattctttta
    32041 attcattctc tcttgcttct tgaagcttta gaccaagaat tttaccacaa aatccagcat
    32101 ttatgaaatc ttttgctaaa attttacttt caaacttatt ctcataaagc cctaatcttt
    32161 tagcttgctc aatacgcttt ttactccaaa gtccaagcca ttccttcaat ggcatttcaa
    32221 aagcaatttt tgctagttca aaatcactta tatcatcaag ataaaaagct tgatttgcgt
    32281 attttaggta ttctttttta agtttagttc ttttaaaaaa tatatctttt tctaaattaa
    32341 aaaaattcaa atacaaatac aagaataaag catcgctttt tacaaattct ctactttgtc
    32401 tgagtaaatt ttgaaattcc aaactcttaa aaacactctc aaagccgaaa acctgtttct
    32461 ctaagccaag ttcttgtaaa tatctatagc cgacatcaag tctaggactt ttaaagaatt
    32521 tataaagctc cgcattgatc ctatctttac taagatcagt tatatccata ctttgcatca
    32581 atttcaagct ttcactagtt atcttaaagt taaaccttga ggcaaatact actgctctta
    32641 atacccttaa actatcctct tgaaagcttt gtttgtcaat atgccttaaa aagcctgctc
    32701 ctagatcttt taatcctccg taaaaatcta aaaactcatc gttaaaaaga ttaatcatca
    32761 tagaatttat ggtaaaatcg cgtcttttgg cgccaagttt ttcatcattg caaatttgaa
    32821 cttcaaaacc tttatgtcca tagcttattt tgttttcggt tctagcaaga gctaaatcat
    32881 aatttttaaa cttatacaca aaaaaacttt ttccaaagcc ttgtgcgccc aatttttgca
    32941 taatcttttc aaaatcttta agttttatat cataaagctc tatatcatag tcacaaattt
    33001 ttaaacctaa aaacaaatcc ctaacactac ctccaaccaa atacgctcgt ttggtataag
    33061 gctttaaaaa ctcagcaata aactgtaaat cggaattatt ttttaagctt atcttcgata
    33121 tttgcaagta aaaactctaa aaaatttatg gtcaagttta acctattttc aagatcatct
    33181 ttttttatac tatttaaacc ttcaaaaaga actaaaattc tctctctaag atgttttaaa
    33241 aaaatatcct cattaagcgt ttgaacctct gttataacac taggatttaa aatttcactt
    33301 tgtaaaaaag gctcttcttt tttaaactct ttattttcct gagtagaaat ttcaatatta
    33361 ttttgtattt tttgctcttc ttcaaatttt gccatagaaa ttttatcttc taagtcttgc
    33421 ggagtatcga gctcttcgca tacaaactcc ataggcggta attcatcttt tatttcagtt
    33481 tttctattta attcttgttc ttttaaaatt tcattttgtc ttctttgctc ttccatgata
    33541 gagctaactt cgctaatggt ttttttagct aaatcttcca aattcatatt tttatcaacc
    33601 accttttaaa ttcattaatt tcttcatcgc ttttcatatt aataaaaaaa tccaacattt
    33661 gagtgtttaa atctttatgc ttggatctaa aaccactaag acgacgaacc gcatcgatag
    33721 cgttttggtt atctggatct tcttttaaga tatttttata aatttctaaa gcttcgtctt
    33781 ttaacccttg agcctcatag atagaagctt cagtgactgt atttttcatc actgtttcct
    33841 aaaatttttc tttaattcta gcaaaaagct ttttaattta tctttaagaa aataagatgt
    33901 tttttaatgt ctattttgtt ttaaacaatt tttctatata ttcttttttt tctttctcta
    33961 agctagaatt taattctttt tgttcttttt taacttgcgc ttttaaatct tgatttttaa
    34021 aatacacata atcaattcca aaaataacac caattataat aagcaatggg attaaaaata
    34081 ccatctttac actttaagaa aattgattaa acacactacc atagtagcga atattctcag
    34141 cattttcatt tttttctatc gtttctattg cgccactatt gattgctttt tggatatcat
    34201 catttaaatc ttgataagaa aaaaccatat taatactgat aatatttggc aatttctcaa
    34261 gcattttata agagtttaac tcatcttcta aattttcact ttcaatcaca actataatct
    34321 tttcattttc acaaagttct acagaacaaa aaggaatttc agatatagcc ttttttaaat
    34381 catttatata ttcttctttt actaaaatca gaacactaga aagattattc atcaatactc
    34441 ctaaacatta tactatcacc aaagcctgaa atgataaaat ctttattgtt taaaaaaata
    34501 ataaactcac tcatcaaatt ttcattatta aaagttttaa caggcttaaa atcacttgta
    34561 ctaaaaactt cactaactcc agcttcatta tcgctataaa cagccaattc tccattagga
    34621 cttaaagcgc aagtatatat caaaaaatct ttttgtaaaa aattttgctc ttcatttttt
    34681 acaactccta tacgcctatc cgttccacaa cttaaaataa cattattttt aaaatctact
    34741 tgatagatat tatctttatg cattttatca tagtttttta acatcttcca atttttcaaa
    34801 tcaaaaagtt ctacttcgcc actctcaaaa cctgcaacta gtctactctt atcttcattt
    34861 aaaactgcat cattaagact agaatgggaa aaattaaatt tttttatatt ttttaaactt
    34921 ttatcaatca attctatttc agaaccaata gaaatcaaaa gataagtatt ttcattgata
    34981 aaaaatgctt ttattatgct attttcttcg agctttttga tttgtaaatt ttccttataa
    35041 aaacttaaat ttttagcacc aaaatcaccc tcgctaagta ttaaaagtgt atgtttaaaa
    35101 acatcaatgt tgtaaatttt agcaaaatca tcaccataat aatttttaat ctttggcaaa
    35161 gataaaagtt cttttaaact tttatcttta atgttatatt gtaaaatttc acctttatca
    35221 gtgcctatat ataagttttg cttatcaagc tttaaagctg ttatattggc atttaatttc
    35281 agctcataag cataagacaa aacacaaaaa agactcaaaa taaaaagaaa ttttttcatt
    35341 tatttacttt acaccctcat taatcacatc aattaaattt gaacgacttt ttaattgttc
    35401 atttttaaat tcaggtttaa agctatttcc cactaaaggt tttgcatcgc tttgtggaac
    35461 atgacactga gtacaattaa aacgactatc gctaatcata tctcctgtgg ttttattgtg
    35521 tctaaaatca taataatgac tagcaggaag tggagttgca ccagcatctg ctgctatagc
    35581 cttatcatgg cagcttaagc acatattgtt atctttagtt ataggtaaca aatcttcaat
    35641 agcatgcgga attaatggtg gtgcattttc ataagaacgc tcaaaacgag tagattcccc
    35701 aggttgtaaa gttgtgaaat ttgcttccac taaatttact ttattttcat tttctaaact
    35761 tgcttttcta agtccaattt gttccgaact taccccacta ttcattgcac aagcggcaaa
    35821 aaataccact gcagcacttc ctaataaaac caatttcttc ttcatcattt attccttaaa
    35881 tcaaaaatat taaaattcaa agcatcatca ttacaaactt ctatacatct tgcacacctt
    35941 atacactctc ctgatttcac gctagtactt tcttttccaa ccatccacaa aacctgtttt
    36001 tcaggacaaa tacggataca ttcataacat ttagtgcatt tatcactatc atgctttatt
    36061 ttaagcaaag caaaacgaga aataaaagca taaaaagctc ctagtggaca aaaatgtgaa
    36121 caaattgccc tagggcttaa aaaagtatcg atacaaaaaa gtataaaggc tacaaaaatc
    36181 caagaacttg tagcaaaaat aatccctcta tgtatcattc ctatataaga aaaactttca
    36241 aacacaggca atgaaaatac aaaagaaagg actaaaacca agaccaacac aaaatagcgt
    36301 aaatttttag gtaaaattaa aaatttatta ttaagggtta atttatttcg cacaaaagca
    36361 gcaaaatctg tgattaaatt aacaggacaa acccaagagc aaaaaaccct tcctaaaagc
    36421 aaaccataga taaaaaatat aatcaaagct cctattaaag ccattaaatc tatactccag
    36481 cttgctaaaa tgatttgcaa aaccgcaaaa ggatcgctta aaggtatggt attaaaaaat
    36541 ctagaagaac ttaaatttcc ctgcaggata aaatctgtag ctttaaaact aaaaagcgct
    36601 aaaattccaa gctgaacgat gcgtctagca attaaatact tcatcacagt tctccatcat
    36661 ttaaataatt ggttgctttt ttagcatcaa aatgttttga agtatctgca ttttttatac
    36721 gtccttcatc tttttcatcc cagcctttta cataatgaga tcctgctttt cccaatacat
    36781 actcccttgg caaaacacga atggctggtt tttcagtaat acaagcaagt tcacaaagcc
    36841 cacaacctac acacacttca tgatccacac taggtagtaa aaaagcgtgc ttggcggtgc
    36901 gttcattgcg tttaagctca agttttaaag ccctatctat caaaggacaa gctctataac
    36961 aagcatcaca ttgaattccc cagtgtgcca cacaagaagc actatcaaca atagcaatac
    37021 ccattttcaa agattctata ccctgttcta aatgcttttt atctaaagca tcagttggac
    37081 attctctaat gcaaggaata tccttacaaa gataacaagg aatttctctt gccttaaaaa
    37141 aaggtgtacc attttttgga ctatctaaca agctagcaag ctttaaagta tcataaggac
    37201 aggcttttac acaaagccca caacgaatac atttgcttaa aaatctagct tcatcttcag
    37261 ccccaggagg acgcaaggca taattatcat cggcttttaa agccaaatta gccaaaaatc
    37321 cacctcctgt acataaacat gcagccttaa aggcactaac gaaaaattct cttctacctt
    37381 tcatttaatc aaaaccctaa atcaagcctt ataaattttt acagcacatt ttttaaagtc
    37441 agtttgtttt gaaagcggac aagtcgcatc caaagtaact ttattgatat atacattctc
    37501 atcaaaccac ggcacatata caagtcctac aggcggtttg tttcttccac gcatatctac
    37561 tcttgctttt actttaccac gacgagattc cacccaaact aaatcacctt gatttaagcc
    37621 taatttctct ccatctttct cactcatata gcaaagtgct tcaggcacag cacggtaaag
    37681 ctcaggcaca cgcatagtca tagttccact atgccaatgc tctaaaaccc ttcctgttgc
    37741 aagccagaat ggatactctt tacttggtct ttcaggtgct ttcataaatg gcctaaagaa
    37801 aattttagcc ttatttttaa tactgtgctc tttttcatct ttaggagcta ttaaatcccc
    37861 atttgtaagc attttgttaa aatcaccata aaaagcaaaa tctgaatttg gagccgcttt
    37921 tttagcataa taatcaaatt tagtattaaa tctccattgt gtttccttgc cattaaccac
    37981 aggccatctt aaacccctta ctttatgata ggtatcgaaa tccgctaaat catgtccgtg
    38041 tcctaagcca aatttacgat attcttccca aaggtatttt tgaacgaaaa agccataacc
    38101 tgcaaattct tttccatcac tgccttgaat ttttctctca tcacctttaa catcagtatt
    38161 atcaaagcct tttgcgatag catcgtttgg attaaagctt tttgcttctt tattggcaaa
    38221 tagtacatca aaaagtgtat catcttcgct ataacccata gcttttgcct cttctaaaac
    38281 acttggcaag gtaagcttat tatccacttt ttgctctttc caaacttctt taagcttaaa
    38341 gcgttttgca aattctaaaa tttgccaagt atcactcatg gcagcaccta caggtaaaac
    38401 ttgttgtttc caatgttgag ttcttctttc agcattacca taagcacccc atttttcata
    38461 aatcatagca cttggtaaaa taagatcagc tatttttgct gaaattccag gataacaatc
    38521 acttacaaca ataaaattat ccatttctct tgctgctgcg atccagtgat ttgcatttgc
    38581 agtgttttgc catggattat tcacttgcac ccatgcaaat ttaatttttc catcttctaa
    38641 atctctcatg atattaagat aaggagagcc tggttttggg ttgatggtct ttgcaggaac
    38701 tttccaaatt ttttcagaaa tttctctgtg ttttggattg gctacaacca tatctgcagg
    38761 caaacgatgc gagaaagttc ctacttctct agctgttcca caggcacttg gctgtcctgt
    38821 taaagaaaag gctccactac ctggtttagc ttgctttcct agtaaaaaat gcaccatata
    38881 agcttgttca tttacccaag aacctcttgt gtgttgatta aagcccatag tccaaaaact
    38941 tacgactttg cgattttttt ctatgtaaag attagctaat tcttgaagtt ttttcttaaa
    39001 atcctccaaa gattcattat catcgccttt ggctactttt gcagtgtatt ccaaagtata
    39061 aggggctaaa ccttttttaa attcttcaaa agaaatttcc cagtttttat cagccacacc
    39121 ttgatgtttc atttcaaatt tatcacccgc tttaacgcca agataagata aagaagtagc
    39181 ctcttcatcg tctaaagtga ttacattttc tttttcaact gtatcttttt cactttcttt
    39241 aaattttgga tgatttggat tatttctcat accataacca atatcagcat aaccagttgc
    39301 aaatacgcag tgatctttga taaatttcat atccatagcc tctggatgat tataaacaat
    39361 ctctcttgct atgtagttcc aaatagccaa atctgtattt ggtttaaaaa taatttcaat
    39421 atcagcaata tttgaagtac ggttagaaaa agtgcttaga ttaacaactt tgactttatc
    39481 aagattactt agttttctat cacttactct tgaccaaagg attgggtgca tttcagccat
    39541 attagctccc caagtgatga tagtatctgt aagttctata tcatcataac agcctgatgg
    39601 ttcatctaca ccaaaagttt gcataaaacc aaccactgca gaggccatac aatgtcttgc
    39661 atttggatcg atattatttg ttctaaagcc cgcttttgca agttttaaag cagcataacc
    39721 ttcttggatg gtgtattgcc cactaccaaa aatccctata cctgtaacgc cgagttcatt
    39781 gtaggctttt ttaaattgtt tttccatttc atcaaaggct ctttgccaag aaacttgttg
    39841 aaatttgcct tttttatcaa attcgccttt ttcattcatg cgaagcaaag gcataacaag
    39901 acgatcttca ccatacatga tcttagcatt aaaataacct ttgatacaat taagtccgcg
    39961 atttacgggt gctgcaggat caccttttgt tgctacgatt ttgccatctt ttctggctat
    40021 cataattcca cagccagttc cacaaaatct acaaacagct ttatcccatt tccaatcttc
    40081 ttcttgtgca ccaagcatag agcttggaac actaagtcct gcaacactag cagcacttgc
    40141 aatagcggta tttttaataa aatcccttct attcatcctt attcctccaa aataaaaaaa
    40201 tcatcttatt ataaaaaatg gagtataaaa atctcttgaa attttaataa aaataataat
    40261 tttaaagctc tattttatag gagttttatt gtccttttta tattattctt acacaaaata
    40321 aatattaaaa ataatcaact taacaattaa aatataatca acttaacaat taaaatataa
    40381 tcaacttaaa ataataaaaa aatgaagatg taaaaattaa gccctaagaa tgggcttaat
    40441 caaaattaat ggcaaccaca accaccgcag cagctagaac caccaaaaaa tgcatcaagt
    40501 tttgcaatat ctggcatttc tgtgatttca tttacaagtt ctttatatgc cactttaccc
    40561 tctttaatca caaatacggc acgagctaaa agcccttcta aagcaccttc atttaccaaa
    40621 acaccatatt tttcaccaaa ttcttttgcc acaaaatcac ttgcaacact taaattttca
    40681 ataccttctg tactgcaaaa tcttcccata gcaaaaggta agtccatact tactacaatc
    40741 acttcagcac cattgtaact ggctactttt ttattaaatt ctctagcttc tgtagcacaa
    40801 actggtgtat ctaagcttgg aacacttaaa atgatttgag ttttacccgc tgcaccgatt
    40861 tcaatcacgc ttaaatcttt agctttaaga tttaccttag gagcatctgc tccaacttct
    40921 actgaatttc ctttaagttt tacaggattt cctttaaaat ttactgtact catttaattt
    40981 ccttttttga tattttaaac attattgcaa ttaatgtttt aggagtgatt atatcctata
    41041 aatattaatt atttttaatt tcactgaaaa ttattttact tctttccaag tatatttttt
    41101 ccacactttt tgagcttctt tactcttaat aaaatcgaca aattctaaag cttttttatt
    41161 ttctaaacct ttttttgtag gagctatttc agctgcacga taaatcactg catttttatc
    41221 tttgataaat aaagctttat catcgcctaa agcctttgcc caatgagacc aaatgattaa
    41281 agcatcaata tttggattgt tattccactc atctacagca gctttggaat ttttagcata
    41341 aatttttata tttttacgta attttaccaa attttctctt tttgcacttt ttaaagccat
    41401 atcttcataa agtccaactt gtcctgcacc atcaaccacc ataacattta cgccatcttt
    41461 taaaatgtct tcaaaatttt taatattttt tggattattt ggacgcacga taatacctga
    41521 tggacgcaca tttaaaacgc ttaaattttc caaacttaaa cttggaattt ttttagcaaa
    41581 atcatccatc attgaagtat tgcctgaaaa aatcaaatct gcattttctt ttgctttatc
    41641 tatccaagct ggagttggac ctgcggttac aatcaccttt tcttttgttt tttcctcaaa
    41701 ttttaaagca agctctttta gcacaggagc aggaccacct ggaccataaa ctaaaatttc
    41761 agcatttaaa aaacttgctg ctactaaact taaaattaat atttttttca taaaataaac
    41821 ctttctttaa taatataact tacttgaaag gaaattttat caatctatag ttaactctcc
    41881 cttgcaaagc cctgcttcta taagaaaacg agaaggagca aaagaagttt ttttgttttt
    41941 atcatattta gcatagctta aataaagtat attttttgcc ctagttaccg caacataaaa
    42001 aagtcttctt tcttcttcta agcttccacc cattcccata agcttttgat taggaaagcg
    42061 accttgtgca agatcaatca caaaaacaag atcaaattcc aagcctttac tcgcatgcac
    42121 gctaagcaaa ttaactcctt tgccgctact catttcgctt gcacctaaag ttagaaaatt
    42181 ataatacttg taaatatcgc tataattttt tgtaagctct tttaaaacat tgaattttgt
    42241 ttctattttt tctaaatttt caccctttct taataaatcc acctgccctg ctttatttgt
    42301 cgctcttttg gttgcaagtt cttcgcaaat ttctctataa aaagaatttt cacaaattaa
    42361 attgactaaa gtcaaagaat gttttatttc catagctttt tttaaaaaaa gatagatttt
    42421 ttccaaattt ctagcgcaca aatcattgat ttttgaaagt cttaaaatag gatgtgcatc
    42481 aaattcactc tcaaatttaa aacgagtttc gctggctaat tcttccaaat ctgcaaaaag
    42541 cccaagttga taatttcttt tttgatgatt ttgcaaattt acatttttat caggatctaa
    42601 aaaacctttt attaaatttc catgccctaa ttttaaaagt gcgtcaaaaa tttcttttgc
    42661 taaaactcca cccacacctt tggtgtattg aaccaaatga ataaaagcca taatatcctt
    42721 aggatttacc acaagagcaa gcatagagct aaaagcttta acttctaaac tttcaaaaaa
    42781 acttccactt ccctttctca cacttgcaat gccctgctcc cttaaagcta cttcaacccc
    42841 atcagcactt gagttgttgc gaaaaatcac ggcaatttct tccaaactta ctccgcttgt
    42901 aagtatcatt ttggctatat tttgatactg atcaaataat tcttcaaaag taagcaaaga
    42961 tggggcttta aactcatcat ttcttgtaac aataagttct tttggatata atctttcgtt
    43021 atttaaaatc actttattag ccaaagctaa aatacttctt gatgaacggt agtttttatt
    43081 taaagaaaaa atttttgcat ctttaaaacg atctttaaac ccacctatga tattaatatc
    43141 cgctccatta aaagcataaa tactttgatc ataatcccct acacaaaaca aacttttact
    43201 atgaaaagcc tctattaagg aactttgcaa agtgtttgtg tcttgatatt catctactaa
    43261 aatttcatca aattcatatt tttcttcttt taaaagctct tttagattga taagtaagtc
    43321 attaaaatct acataattaa aacgcttttt ttcattatca tattctttta aaatatcttc
    43381 ataaatttca gcataaatac tttgatcttc gtagttttga caaaaccaag tataaaaatc
    43441 ttgattgtgt gctttgtttt gaaacaaaga ataaagatca tataaataac ttgattgata
    43501 aggttttata tcacttaaat gcctaaaagt tcttttttca tagacacttt taagtagagt
    43561 ttttaactcg cttgcttgct ttaaggctat atttttatcc gcatttctaa gtaaggtata
    43621 agccgtacta tgaaaagttc ctgcaagtat tttactggta atatttttat caaaaaattt
    43681 ccctaaacgc cctatcattt ctttactagc tttatttgtg aaagtcaaaa gcataatttt
    43741 ttgaggtgcc actcccttgc ttaaaagata agaaattctt gcaacaatag tagaagtttt
    43801 tcccgtccct gcacttgcaa taacaagatt gcgtccaaaa tcagcagtag cggcaagata
    43861 ttgttcatta tttaattctg aaagtggcat tattttcctt ataaaagtta aaat
//
LOCUS       DAPWGO010000007        36711 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.007, whole genome shotgun sequence.
ACCESSION   DAPWGO010000007 DAPWGO010000000
VERSION     DAPWGO010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 36711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36711
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.007"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            54..1583
                     /locus_tag="RJ336_000316"
     CDS             54..1583
                     /locus_tag="RJ336_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HDZ5212791.1"
                     /translation="MTKQEIQKLDTNFLGHPKPLFSLSMVELWERFAFYGIRSLLVLF
                     MATTISKGGLGISTEYASAIYGIFAGCLYLAALPGGWITDNYLGQKKALFLGSFIIAL
                     GHISIALSILSTPIFFLGLTFIVIGTGFFKTSASVTVGMLYKQNDTRCDTGYTIFYIG
                     INIGAFIAPLICGFVQAKWNYHLGFGIGGLGMLISLLILYFKATPELEEFHKNCTLKQ
                     NWEQPFKKSKNLTLILSISLLSIIGFFLIFINLADINPIILSKKLLIVILLCLVIYFI
                     YLFVFKTLNKREKQQLTILIVLFFVATFFWSTFEQKPTAYNLFAQDFTNRNIFDWKIP
                     TNWFQSFNPIFIIILAPIASYIWIFLEKKNIYFSSIGKFTLGILFAGIGFMMMTFASQ
                     NLINNNGLPISMVWIIISIFFLTLGELCVSPVGLSIMAKVAPDLIKNQIMGLWFVASA
                     LGNFVAGLIGGNVNIKNIDQLPNIFGQCMWMLFVVALLLFIAKKPIYKILNEKNKQLS
                     N"
     gene            1755..3308
                     /locus_tag="RJ336_000317"
     CDS             1755..3308
                     /locus_tag="RJ336_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HDZ5212792.1"
                     /translation="MSKNVKNLDTSFFGHPKPLLSLSLTELWERFSFYGIRPLLYLFM
                     IASFEKSGMNLKPEEASAIMGIFASCLYLAALPGGWLADNYLGQKRAILLGALTIAFG
                     HLCIAFSYFNNKIIFVGMVFLVIGTGLFKTCASVMVGMLYKKNDARRDSGFTLFYMCF
                     NFGAFVAPLICGFLQKEYGWHFGFGAGGIGMLLAVIIFYLKTMPDLKEFDEKVGIDST
                     WDRPSKKSKNAFYIIIVSGIVLLGAIFLILGGFIKLDAQVINKNIILTILACAGIYFL
                     YLFAFTSLKIEEKRNLIIFIVLFLAAALFWSVYEQQYTSFNFFAEKLTDKTILNYEIP
                     TIWFQSLGGLFVILFAPFSAFIWTICAKNNKEISSIIKFALGLLGAALAFLIMALASN
                     HAISLNGDANTLRENLENSSQIILVSPWWLVSSFLLMVLGELCLSPVGLSIMTKIAPN
                     LIKSQVMGLWFVASALGNALAGFIGGKASEENIAYLPNLFYQCMWILLGAVIILLILK
                     KPINKILKN"
     gene            3324..5114
                     /locus_tag="RJ336_000318"
     CDS             3324..5114
                     /locus_tag="RJ336_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HDZ5212793.1"
                     /translation="MSIYKQRVLELRRLMKENNIDAYLILSADPHLSEYLPEYYKNRV
                     FISGFKGSVGTVLITQEEGFLWVDGRYWLQAQKELEGSGILLQKQDVKNTFTKWLEKN
                     LSEDQILGIDFALLPLSLQKDLQINCKANLKHIDLISPLWKDRPTLPQEKIYEHELEY
                     CSYSRKEKLALVRQKMKNLNVTSHLISSLDDIAWLTNLRGNDVNYNPVFLSHLLILED
                     KALLFVDQKKVNSELEKKLNLDGFWLKNYDEIIMELEKLANTNLLIEPSKMTALLINS
                     LDKSVKIIQEINPSTHLKAVKNTKEIAHIQDAMIEDGVALCKFFAWLEEAIENKELIS
                     ELDIDAKASEFRAQSKHYISDSFATIAGFNENAAYPHYKATKESFAYLKKDGLLLIDS
                     GGQYKNGTTDITRVVPIGKANAEQIHDYTLVLKAHIAISSAIFPKDIAMPLLDAITRA
                     PLWKEQIDYIHGTGHGVGYFLNVHEGPQVLSYLSPVLEKTKAKEGMLTSIEPGIYKVG
                     KWGIRLENLVIHTKVENPKNKDFGEFLYFKPVTLCPFEISCIDTKMLDEKEKEWLNNY
                     HKEVFEKLSPKLGDYPKALVWLEKRTKAIF"
     gene            complement(5235..7043)
                     /gene="mrdA"
                     /locus_tag="RJ336_000319"
     CDS             complement(5235..7043)
                     /gene="mrdA"
                     /locus_tag="RJ336_000319"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDZ5212794.1"
                     /translation="MRMRLVVGFILLFFIFLLSRVYYLSIKSNVYYEELAKQNAIKTE
                     FLPPVRGQITDRNGTLLAINDLGFSISIKPYLSIKKSNKGILDKELSELTNLFPDLNA
                     SKLAEIYKRNDSYYNQDFIKVVDFIPYDEIIPHYSELNLNKTIKIDPVVKRKYPFGKL
                     ASHIIGYVGKANLQDVQENEIAKLSNYTGKSGIERYYNDILQGEKGTRVYKVNALNQE
                     VEQLSYTPAMSNDIELTIDIELQSYLTSLFEGNAGAAIIMNVNDGSILAAGSFPEYDL
                     NPFVTGISFKDWDELSNSLDHPFTNKLINGYYPPGSVVKMGVGLSFLNSKNISPSTQY
                     VCNGSIELGGRFFRCWNRSGHGPVDLKHAIKYSCDVYFYNGSLQVGIDQISETLSRIG
                     FGAKTGVDLPSEFVGTLPSKEWKMQRYRQSWFQGDTLNTAIGQGNFLATPMQIARYTA
                     QIAKGGEVIPHFLKSIENNNNTTIENQMDENKKEIFTLFEKSQLPYIRDAMYAVANEQ
                     GGTSYRYLHNLDVKVAAKTGTAQVVGFSQTDKNRVDEKQFEYYTRSHAWLTSYAPYSK
                     PKYVVTVLLEHGGRNITSGATVAKIYQKMIELGYFK"
     gene            complement(7044..7538)
                     /locus_tag="RJ336_000320"
     CDS             complement(7044..7538)
                     /locus_tag="RJ336_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212795.1"
                     /translation="MRRNLSAYKAKFNGAYVFLGFFFLIYQILGSTFVYAPLLYGIFF
                     CYMFCLLEERERTFSKLDFRWYFSLFFLFFTDITYNFFIFSSWLAFFIFYYLCADWIK
                     TNLKIGKFIPVVFVLCAYGIILFLDMILSYIGDEKIKILGWAYIVSVFIECCLAYVFF
                     KGKI"
     gene            complement(7535..8131)
                     /locus_tag="RJ336_000321"
     CDS             complement(7535..8131)
                     /locus_tag="RJ336_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDZ5212796.1"
                     /translation="MIISAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCK
                     QKNLAKSSATPGKTQLINFFEVTCKRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQNL
                     DEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSE
                     KAKLKNEFKDSILVSNLNKFGLDSLEDIIIDQTLGLGK"
     gene            complement(8128..8589)
                     /locus_tag="RJ336_000322"
     CDS             complement(8128..8589)
                     /locus_tag="RJ336_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HDZ5212797.1"
                     /translation="MVARQIILLLVCVSVTWATQIEVKALNFYSDENKGESILSGNVE
                     VIRGDDILNSEKLIIYTDKNRKPIRYEAMQNARFKIVLKGKTYKGSGDKFIYNVIKDT
                     YEINGHAYINELGSNQKLFGDKIIVDRKANIYRVESKDQKPARFVFDLKDK"
     gene            complement(8571..9086)
                     /locus_tag="RJ336_000323"
     CDS             complement(8571..9086)
                     /locus_tag="RJ336_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212798.1"
                     /translation="MAIKIFGILIALFTITFTILSLQDPYSLNLQTNALNFKNIEAKN
                     LKAYESNTSTIKAYYKANSWVRYADRDEFNDFITLNLDFNLSANRLEFFNKDMSKVLF
                     EGNVTYIGANNVKIISQEVEYEPKNKVLYTNTDFKALINGSIINGNTLNYDVKNKILN
                     IQGVNAWLQDK"
     gene            complement(9077..9565)
                     /locus_tag="RJ336_000324"
     CDS             complement(9077..9565)
                     /locus_tag="RJ336_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HDZ5212799.1"
                     /translation="MTELIFLDVDGCLTDGKIIYTSNGEFIKEFDVKDGAAIEAWLKL
                     GKKIAIITGRNCPCVEKRAKDLKIEILYQGIKDKLACAKEILQKLNLDFSQCAAIGDY
                     FNDKALLESVGLSFKPKDGHKDLNVDIVLSKKGGKAAVAQMIEILVEKNHLEEEWNKL
                     WL"
     gene            complement(9571..10398)
                     /locus_tag="RJ336_000325"
     CDS             complement(9571..10398)
                     /locus_tag="RJ336_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HDZ5212800.1"
                     /translation="MQIKTITLKLSAVSLGALFFSGCLGTSFFSSLDNAQVYYPSNDF
                     KSSPSSSGTKGTMKPYTINGKTYYPTVVAVGETADGIASWYGPGFHGKKTSNGETYNQ
                     NALTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMIAS
                     GTAPVRLEVIGFGSSNSGNNIVHSNVNYGNSGEIANNGQIYEGGNFMVQIGAFKNPAG
                     AQTIAARYKTYRTYSSTIRTSSVDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE"
     gene            complement(10358..11476)
                     /locus_tag="RJ336_000326"
     CDS             complement(10358..11476)
                     /locus_tag="RJ336_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDZ5212801.1"
                     /translation="MKKNLLCFLICFNFLFAQINTPEFYERQMNVLRNLDINPSFISD
                     LIFVQTQQDIKSKHAQTLIDSMQNFSKVTPMIRKILSQQEVPDEILYLAMVESGLKTH
                     SVSNAKAVGVWQFMQPTARNLGLRIDAYVDERRDPVKSTYAATNYLKELKEEFGKWYL
                     ALLAYNCGNGKLRQAIKQAGSDDLSVLLNPDKKYLSLETRNFIRKILTLAFLANDRDF
                     LLDKDASLMNYALSNEFAKVDVPSSASLKEIAKNLNMDLATFKKYNPQFKHNFTPPGK
                     GYYMYIPLNKVAFFDKNFKAEKLAKVDTTIPMTRTYTVKSGDSLYKIAKNYNISVDEI
                     REFNKIAKNHLSINQKLIIPIKENKNANKNNYTKVVSR"
     gene            complement(11476..12291)
                     /locus_tag="RJ336_000327"
     CDS             complement(11476..12291)
                     /locus_tag="RJ336_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDZ5212802.1"
                     /translation="MFLNLDFQDGLRIVDTHCHLDSEAFKDDLDETLNRAFKNGIEKI
                     IIPGADIKDLPYAATIAHKYKNIFFAVGVHPYEIDNYDEKILRQYLYDEKCVAVGECG
                     LDYFRFKSDLAEEIQKEKENQKKIFIAQLELAIEFKKPVIIHSREANHDTYEILHGYS
                     KDLVGGVLHCFNASEHLLTLFEDGFYFGIGGVLTFKNAKKLVEILPKIPKDRLLLETD
                     APYLTPEPYRGKRNEPLLTQFVANKMCEVLNLSRKELLEICFNNSEKLFFKGY"
     gene            complement(12282..13526)
                     /gene="cbrR"
                     /locus_tag="RJ336_000328"
     CDS             complement(12282..13526)
                     /gene="cbrR"
                     /locus_tag="RJ336_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile resistance response regulator CbrR"
                     /protein_id="HDZ5212803.1"
                     /translation="MNKKILIIDDNKMLGKLLAKKIQMTLDYEVDIAFGFAEAKELMN
                     NDYFLAFVDLCLPDAPNGEVVDYVIEKKIPAIVLTASGDKATKEKFMDKDILDYIFKE
                     SETCIDEIISSIVKLNQYAKTKVILAMSKLPERNEIKKILTQRQFNVLAAAHGEEAMS
                     YLNDNNDVKLIIADVNMPVISGFELLIQVRERFSDDELGVILLGDHNDSFEANSFKNG
                     VNEYLFKPLSKESFNCRLDHCLSYMDDKKFLSTYNVLDPVSGVKNYNALIDGIDDYFN
                     EIATKDEEFAFAFLDIDNLQMINDEYGREVGDEVIKICANEIVNETKGRDLVGRYSAE
                     KICILLKNISQERAIKIFSRIRVNIKKAGVLVNLDEVFFTASIGVVFGKSGDKIDSLV
                     DKASKILSQAKDNGKDRVEVCS"
     gene            complement(13630..15153)
                     /locus_tag="RJ336_000329"
     CDS             complement(13630..15153)
                     /locus_tag="RJ336_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RecN"
                     /protein_id="HDZ5212804.1"
                     /translation="MINRIFMKENLGFKKAELEISKGLTVFTGLSGAGKSVLFKGILS
                     AFSLSESEAKIVEIELDDKLDLESFGIESEEENVFKLLKEKNTKYFINNQSIAKKSLQ
                     NLSKTFIKYLSAKENNEFGNEKFLNLLDALEMQENTNFVSFLEDFKKDFNAYSQISNE
                     FNVILEEEKKVEELKELARVQIEKISSINPKIGEYEELLILKKKLSKKDKLEEAWSKT
                     EHIFELEKVVIEALNLSEVDPSFFSECLNELRVICENQKMEDLDFDVETLLDRIENLS
                     YLIKRYESIENALEVLKQKKHELEHYENLSFEKKELEKKFQELKQKLEEKAQILTQAR
                     KKNLKKLEKCLNNYLKDLYMKDASLTLKENEKISILGKDEIILDINLAHLKNLSSGEL
                     NRLRLAFIATECKILNAGKGILFLDEIDANLSGKEAMSIAKVLEELSKFYQIFAISHL
                     PQLSSKAHNHFLVEKNGEESKVKKLDQEERIKELARMVSGELVSYEAIEFAKTLFKN"
     gene            complement(15153..16013)
                     /locus_tag="RJ336_000330"
     CDS             complement(15153..16013)
                     /locus_tag="RJ336_000330"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HDZ5212805.1"
                     /translation="MQNKIDYKNIKKIGLVTRPNVSLDKEILKLQSILSIYKVELVLF
                     KESSEILDLPKYGLDDLFKISDFVISLGGDGTLISLCRKACEYDKAVLGIHAGHLGFL
                     TDFKVDEAENFFQAFFQGEFRIEKPYLLSVFLEDKQGKILEKLAFNDVVISKNNQASM
                     AHIEVFRKEKKFNEYFGDGLIVATPAGSTAYNLSANGPIVYTLAQAFILTPVCSHSLT
                     QRPIVLPKGFEIEIMAKDCILCIDGQENYKMNDFKSIKVGLSDKNVALIHPKNRDYFQ
                     ILKEKLHWGN"
     gene            16104..17855
                     /gene="aspS"
                     /locus_tag="RJ336_000331"
     CDS             16104..17855
                     /gene="aspS"
                     /locus_tag="RJ336_000331"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDZ5212806.1"
                     /translation="MRSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGI
                     IQLVCDPNDSKEAHEIASNARNEFVLIAEGTIRPRGEGLVNPKLKTGEIEVVVSKLTI
                     ENESAVPPFAIADESVNEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFL
                     EVETPILTKATPEGARDYLVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCF
                     RDEDLRADRQPEFTQIDVEMSFCEQKDVINVAETFLKDIFKACGKEIQTPFRQMQYKD
                     AMENYGSDKPDLRFDLKFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFS
                     KRQMQRFEEFVRKFGAQGLAFIQVKEDGLKGPLCKFFSEEDLNELSKRCELEVGDVVF
                     FGAGAKKTVLDYMGRFRIFLANELNLIDPNALEFLWVVDFPMFEQNDDGSYSAMHHPF
                     TMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEK
                     FGFLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPA
                     SNEAMRELGIKLRENIK"
     gene            17852..18430
                     /locus_tag="RJ336_000332"
     CDS             17852..18430
                     /locus_tag="RJ336_000332"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDZ5212807.1"
                     /translation="MKELFLIIGAPGSGKTTDASLIAQADATNITHYSTGDLLRAEVA
                     SGSELGKTIDSFISKGNLVPLDVVVNTIVCALKAAPTKTIIIDGYPRSVEQMMEFDKV
                     LSEQNKICLKGVIEVRVSEEVAKERVLGRNRGADDNEEVFYNRMKVYTEPLNEILDFY
                     QKKKLHFIIDGERTIEPIVADMKELIKKIQSI"
     gene            18440..18958
                     /gene="ppa"
                     /locus_tag="RJ336_000333"
     CDS             18440..18958
                     /gene="ppa"
                     /locus_tag="RJ336_000333"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDZ5212808.1"
                     /translation="MDLSKIKIGDIPNKINAVIEIPYGSSIKYEIDKDSGAIMVDRVM
                     ASAMFYPANYGFIANTLADDGDPVDILVLNEYPIQAGAVIPCRLIGVLIMEDESGMDE
                     KLLAVPNSKIDARYDNIKTYTDLPQATLNKIKNFFETYKILEPNKWVKVQDFKDEKAA
                     IEILEKAIKNYK"
     gene            18999..19496
                     /gene="msrA"
                     /locus_tag="RJ336_000334"
     CDS             18999..19496
                     /gene="msrA"
                     /locus_tag="RJ336_000334"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDZ5212809.1"
                     /translation="MKNIVLGGGCFWCVEAVFERLKGVIDTEVGYSGGNPNPSYESVC
                     NGDGNIEVVKINYDEKQISLLEILTLFFKIHDPTSIDKQGGDIGIQYRSIIFYENEED
                     KILAQNFIEEQQKIFSKKIVTKISRLQTYYKAENYHQHYFINNPNQGYCQAVIAPKLQ
                     KIQSG"
     gene            complement(19672..20511)
                     /locus_tag="RJ336_000335"
     CDS             complement(19672..20511)
                     /locus_tag="RJ336_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HDZ5212810.1"
                     /translation="MQNILSSFTQEKNVCVFANTLKISIEELEKEFLKQKLKFKKINA
                     YCYLFDAKDKAILSSMKAFNEAHFYIQNYSSYLCALNLEVKAGQRVLDMCAAPGGKSI
                     NLANFMQNTGYLACNEMSRDRFFILQKNLKNYGVNAKVFMKDGKNIGNLCPLKFDKIL
                     LDAPCSTFAKIGFDLEKSYKEIKNIAKTQKKLLHSALKALKIGGELVYSTCTFTKEEN
                     EEVIENALKSEFKLELLDIDLENVEAKAGQSEEFAEISKCRRILPSLDYDGFFIAKLR
                     KLC"
     gene            complement(20540..20923)
                     /gene="ruvX"
                     /locus_tag="RJ336_000336"
     CDS             complement(20540..20923)
                     /gene="ruvX"
                     /locus_tag="RJ336_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDZ5212811.1"
                     /translation="MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKN
                     LLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLEFDKEICFVDESGTSKEALGYGV
                     ANTRKKDGKLDSLSAFIMIKDYFAL"
     gene            complement(20920..21693)
                     /locus_tag="RJ336_000337"
     CDS             complement(20920..21693)
                     /locus_tag="RJ336_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDZ5212812.1"
                     /translation="MASEILPDEFLELFKDLKKPPKKLHYKGNLSLLKQDKIAIIGSR
                     RMSVYTKNCVFSLASMLKNAHLCVVSGGALGVDITASMAAMPNTIGIFANGLDQIYPR
                     TNEKIIKQIYENALALSEYEDDYLPKNYDFLLRNRLVITLSKAVVVAQADIKSGSMQS
                     AKLALELNKPLYVLPQRLGESTGTNLLLKENKAKLICDFKEFVSEFASIDINQDEFLE
                     FCKKGVSVDEALKIYGQKVYEYELEGKISIEGLFIRVLA"
     gene            complement(21683..22765)
                     /locus_tag="RJ336_000338"
     CDS             complement(21683..22765)
                     /locus_tag="RJ336_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HDZ5212813.1"
                     /translation="MSKKKLVQIQRYLIIAILFLLCIALALGILVKYQNSQDVSSVKP
                     DYFIDKQEDLISSNKDHYEIGIFQENEFDNNKFVSILEQKIQEIDDLNTSLNEQNLSS
                     VEQNLSLEQNQSLEQNFIPKDTNLTQDQNLTFNEDIHLNKISKKPKLAIIIDDMANAS
                     QVRGLKALNLKLNPSFFPPDKNHSETPKLALKFDFYMVHLPLAAINYNKPELDTLNPN
                     DSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMRKLYEVLKNQNIFFVDSKTI
                     GNSKANKIAKELNVPYIQRDVFLDNEDDVNYVKKQIQNAVKLAQKKGFVIAIGHPRKN
                     TFKALEQSKDLLKSVDLVYLSEIYGK"
     gene            complement(22769..23791)
                     /gene="ilvC"
                     /locus_tag="RJ336_000339"
     CDS             complement(22769..23791)
                     /gene="ilvC"
                     /locus_tag="RJ336_000339"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDZ5212814.1"
                     /translation="MAITVYYDKDCDLNLIKSKKVAIIGFGSQGHAHAMNLRDNGVNV
                     IIGLREGSVSAVKAKNAGFEVMSVSEASKTADVVMILAPDEIQADIFNVEIKPNLSEG
                     KAIAFAHGFNIHYGQIVAPKGIDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESK
                     NAKNLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLSALIQAGFETLVEA
                     GYEPEMAYFECLHEMKLIVDLIYQGGIADMRYSISNTAEYGDYITGPKIITEETKKAM
                     KGVLKDIQNGVFAKDFILERRAGFARMHAERKNMNDSLIEKTGRNLRAMMPWISAKKL
                     VDKDKN"
     gene            23910..25844
                     /locus_tag="RJ336_000340"
     CDS             23910..25844
                     /locus_tag="RJ336_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HDZ5212815.1"
                     /translation="MKEFLNSLSYGISPHEASNEFKQILRELLASHIIKEHKNKYYLN
                     NGFAFGVLDISSKGTGFLQCFDESFKKDLLIENKNLKGANYKDIVAVKLLPLKKKRPS
                     AKVILVLKRANETSLVITKRYGEAVLGMNIKTGLSTALKASQKSLKALPLGTILKIEN
                     ENNNIIEVLGHIDDESVDEKISLALFNKNNEFSDACIKEALANGDSVDASMYENRMDL
                     RALPFCTIDPIHAKDFDDAIYFDIQKREIYVAIADVSEYVYAYSAIDKEARNRGFSIY
                     FPHIAIPMLPRPLSENICSLKPHLDRLAYCFKITLDHENKVIKEELFEGIINSKRRFN
                     YNEVDEILIQKPDLKELSWLYELFEITKNLRKMRLKNAFEFRTEELRMNLDENLSLKS
                     TVFEKDTPSHNLIEDCMLLANKAAAKLIDIGVFRNHLSADARKIDKLLNELRELGIDV
                     NFKPNLPELIRDIQALSDELNLRAEVDKLIIKAQKKAEYSSINAGHFGLGFDKYSHFT
                     SPIRRYSDLILHRLLKAKQKNDEKLFNYLLLNIESTCENLSTLEREADKVAFDFMDRK
                     FARWAAKNIGKKFKALVVQNDGVCIAKLDDEIKGADIILYDTRVNLLENVEVQIMEAD
                     IVMAKIYAKITQRLIKEENV"
     gene            25837..26802
                     /locus_tag="RJ336_000341"
     CDS             25837..26802
                     /locus_tag="RJ336_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDZ5212816.1"
                     /translation="MYRKELQTLLSKDSIPNFFFLYGADNFQSELYAEFIKEKYKPDE
                     TLKLFFEEYNFTRASDFLSAGSLFSEKKLLEIKTSKKIPTKDLKILVELCKNNTDNFF
                     LLELYDENSKQSDIEKIFSPHFARFFKANGAKEGVELLSIKAKQLGVEITQNALFTLF
                     TSFDENLYLAASELNKFSGLRVDEKTIEQYCYSLNTGSFESFFEKILKKQDFKSELEK
                     ILDNFNEIALINSLYNSFYRLFKIALYAKVNGKIDFKDLLGYTPPPQVGQNLSSQAFS
                     LKIEQYKEIFTLLLKSEYELKTNSKLVKKEFLISNLLKLARILKN"
     gene            complement(26804..27148)
                     /gene="hypA"
                     /locus_tag="RJ336_000342"
     CDS             complement(26804..27148)
                     /gene="hypA"
                     /locus_tag="RJ336_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HDZ5212817.1"
                     /translation="MHELSIVESLIELCEENALNNKACNVQEIYVKIGRLSGIEADLF
                     KRCFETFKENSNICKNAKLFIELAPLEILCLKCDKTSILEENVFKCPKCQSIEYKITQ
                     GEDLHLMRLVME"
     gene            complement(27148..28122)
                     /gene="hypE"
                     /locus_tag="RJ336_000343"
     CDS             complement(27148..28122)
                     /gene="hypE"
                     /locus_tag="RJ336_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HDZ5212818.1"
                     /translation="MKNISLAHGGGGEEMNELLTKLFKIFDNEILNANNDAAILGNLA
                     LSTDSFVLSPIFLDEEVNIGKLCVCGSINDVLMVGAKPKYLSLGLILEEGFELEKLER
                     ILKSIKEECEKCGVMLVCGDTKVVPKGKADEIYINTTALGEIISKKESKNIKAGLSIL
                     LSGDIGRHGASVLIKRNELEADVKSDCKALDKEVLELLEKDIKVVAMRDATRGGLSAV
                     LNEWAKQSGNDLLIFEEKIIVQDEVLGLCELFGYEAYELANEGTFILCVEKEDELKAL
                     EILKKYNVNASIIGEVLEEKKARVILQNAYGAKRFLESPKGELLPRIC"
     gene            complement(28119..29210)
                     /gene="hypD"
                     /locus_tag="RJ336_000344"
     CDS             complement(28119..29210)
                     /gene="hypD"
                     /locus_tag="RJ336_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HDZ5212819.1"
                     /translation="MNFIDEFRDKESILALKKLIEQELKNPINIMEICGGHTHSIMKY
                     ALPSILPKEINFIHGPGCPVCVMPRVRIDTAIKLASMKDTIFCTLGDLLRVPGSEISL
                     LDLRAKGADVRALYSPLEVLEIAKQNLNKNIIFFAIGFETTTPMSALLLQKVIEEKIN
                     NVFFHINHITVPAPVEAIMNDENVKINAFLGPSHVSVITGYGIYEPLAAKFKTPIAVS
                     GFEPVDILESVLNIIKQSNEGTFKVYNQYKRAVSKEGNVKAQNLVKKYFRVCDFEFRG
                     LGLIKDGGLELKEEFSAYDASKKFDCTVQSKNESKACICGQILRGLAKPYDCKVFGKA
                     CTPRSPIGSCMVSGEGACAAYYKYSKVNV"
     gene            complement(29194..29475)
                     /locus_tag="RJ336_000345"
     CDS             complement(29194..29475)
                     /locus_tag="RJ336_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HDZ5212820.1"
                     /translation="MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYV
                     LIHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIKSDEGDLGLNEFHR"
     gene            complement(29475..30218)
                     /gene="hypB"
                     /locus_tag="RJ336_000346"
     CDS             complement(29475..30218)
                     /gene="hypB"
                     /locus_tag="RJ336_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HDZ5212821.1"
                     /translation="MCKDCGCSINSSHTHDHHHDHHHENPSLKESKTIEVISKILSKN
                     DEEAKHNRAHFNEANTLCINLMSSPGSGKTTLLESTIKALKNELKIAVIEGDLETNND
                     ALRVKNAGALAYQITTGQSCHLDAFMVHEALHHLVIDDVDLLFIENVGNLVCPASYDL
                     GEHLNVVLLSVTEGSDKPQKYPVMFKKADIVLITKADLAHHFDFDVKEATRLIKELNP
                     RADIITLDAKNGTNMELWYKVLKLKKELF"
     gene            complement(30291..32477)
                     /gene="hypF"
                     /locus_tag="RJ336_000347"
     CDS             complement(30291..32477)
                     /gene="hypF"
                     /locus_tag="RJ336_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HDZ5212822.1"
                     /translation="MYHLGYKIKISGLVQGVGFRPLVYELALKSKLFGEVRNDGFGVE
                     IILACTQKECENFIENLKNHLPPLARIDKLIITQISISNYENFSITPSLENTKSTPML
                     SDFALCKECKKEFFDEKNPRFLYPFITCTHCGPRFSIIKSLPYDRVHTSMQELLMCEF
                     CKSEYEDPKNRRFHAQPISCPKCKINVFLKNPKGEILVKDQEAFIQSAKFLKEGKILA
                     IKGMGGFHLMCDAFNEEALKTLRLRKNRPKKPFALMCKDLQSAKELAFIDEKEEALLG
                     GVLAPIVILKAKKAFSLIAPDVDKIGIMLAYTPLHLLLFEYFKGSLVATSANLSGESI
                     IKDEFNLCQKLDGVFDFYLDYDREIINASDDSIVQVVNGKTMFLRTSRGLNPFYLERN
                     FNKKGTFLALGAELKNEFVIFYENKLLISPYIGDLKSLDVHERFFKLLEFFKQNYDLK
                     FDAILCDKHPNFSYAKEFEERIKISHHYAHFCAVYFEYEENFSKDEKALAFICDGTGY
                     GEDGKIWGGEVFIGNLKEYERIAHFENFTLINSDIKNIQNLALSLIFHYDLEDKAKEF
                     LAKIPKIKLENLKKIYSHSNLQTSSLGRIIDAFGSIVFNLEKSSYEAQVGLMCEAFYD
                     KNLDFSYKLFVEKGQVNFKNLILGALQDEKTKAITGMFNALANFIIDFSKDYDLKVLL
                     SGGVFQNKTLLEILKAKNFDFFIPLKYPCNDSSIALGQMVHFLKKE"
     gene            complement(32458..33978)
                     /locus_tag="RJ336_000348"
     CDS             complement(32458..33978)
                     /locus_tag="RJ336_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212823.1"
                     /translation="MTLDFDFIYNADNDIFEYLLRFYAKNYNYILSKEENTYHFSIDA
                     DEENLKTFCDSLNFMSHSVFLKKFDVKAGHGFNPCMPEDKEFSRFSYITHLNSNAYQE
                     KKLLNKNEWGVFCECEFSSNLSEFEKINEENFNTFLNLAFDLLSQEKKIYLKDKNGIY
                     EFSLFKNEFIGDFLLPCDIKAINSVFVCSNENLKLLASLEKPLMKLRLNAMFRKNHNL
                     DFNDFKIRLARDLFCFALGLKLFENEYKFLSVKKIEEYQKDFYISALDEQVVVLEGFE
                     FINAKARELIFSKKDKNMARISYLVSRYKEKAFILELSKDDEDILLINKELNLLKLCL
                     PKHSKELYEEIKKDEIGARLLENFSKEFPLLDENFELQNNFYSLFGLIGRVLNLGKNL
                     QESASELLKIADESKMPRGVKIDYRLKEDKSFDYTRTLRSAMSFMLAGVDSANIAYGA
                     VESLAYFLRDTYDELREKKQSDLALISGSLFEHKSLLKNTLKHLKNCQLSDVPLRV"
     gene            complement(34020..34667)
                     /locus_tag="RJ336_000349"
     CDS             complement(34020..34667)
                     /locus_tag="RJ336_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDZ5212824.1"
                     /translation="MARQSSSLKSFIYKDECYFYSKKCIKTLRLRLNEKGEFVLSIPY
                     FCTFKSVYEFLDKSSSWMNEAKIRFEKKVLKDDELIFLAKKYKIIFDENAKKIYFDKD
                     KIICQNKAKLDLFLRQNAKKIFTFYLKKWSKKTGLFYTHLSIKNMKTRWGSCNHNKAY
                     INLNLKLIQKSLRAIEYVILHEISHLKFPNHSKEFYTFIEHFMSDFRQREKEFLS"
     gene            complement(34643..35959)
                     /locus_tag="RJ336_000350"
     CDS             complement(34643..35959)
                     /locus_tag="RJ336_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDZ5212825.1"
                     /translation="MAKKQFSLTKLSVPIFWDLLSKYLTIIINTAMVSHYSNFLVGAM
                     GAGNQILDLFITIFSFLSVGCSVVIAQAIGAKDHVLARKVIHQSLFLNALLGFVCGVL
                     ILWHGEYLLYLLKIPQELLKDSEIYLHMLAICLFFDAIGIVLAAIVRVYNMAYWVMFI
                     GFLMDIVVICGNYYVLHYTKSELFGIGLSNIFARIVAIVALFAILFYKLKIHLKIKEM
                     IKLEKEVLKKVLNIGGFSAGENLLWIVQYTIAFAFVASLGEASLSVQTIYFQISMLIM
                     LIGQAISIANEIIVGKLVGARYENIAYKHAWRALYFSVIASALVAFLNYLCQDFTMQI
                     LGLKEELKNLMIPLFALSIFLEISRTFNIVMVNSLRASGDAKFPFFSGLVFMMGVSLP
                     VGYVLCFHFNLGILGVWIGFCADEFLRGMVNSYRWKSKKWQGKALV"
     gene            complement(35962..36543)
                     /locus_tag="RJ336_000351"
                     /pseudo
     CDS             complement(35962..36543)
                     /locus_tag="RJ336_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816764.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT        12801 a         6306 c         4772 g        12832 t
ORIGIN      
        1 tctattacta ttagttaaaa tattttaagc ataaaaaaga aaggtattgg gaagtgacta
       61 aacaagaaat acaaaaactc gatacaaatt tcctaggtca tcccaagcct ttattctctc
      121 tatcaatggt agaactttgg gaaagatttg ctttttatgg catacgatct ttacttgtgc
      181 ttttcatggc aacaaccata agcaaaggtg gacttggaat aagcactgaa tacgcctcgg
      241 caatttatgg catttttgca ggatgcttgt atttagcagc acttcctgga ggctggatta
      301 ctgataatta tttagggcaa aaaaaggctt tatttctagg ttcttttatt atagctttag
      361 gacatattag catagcctta tctattttaa gcacacctat atttttccta ggacttactt
      421 ttatcgttat tggtactgga ttttttaaaa ctagcgcttc tgtaacagtt ggaatgttgt
      481 ataaacaaaa tgatacaaga tgcgatactg gctatacgat tttttatata ggaattaaca
      541 ttggagcatt cattgctcct cttatatgtg gttttgttca agcaaaatgg aattatcatt
      601 taggatttgg cataggaggt ttaggtatgc taatctcttt gcttatttta tattttaaag
      661 ctacccctga acttgaagaa tttcataaaa attgtacttt aaagcaaaac tgggaacaac
      721 catttaaaaa aagtaaaaat ttaactctta tactaagtat aagcttgtta agtattattg
      781 gattttttct aatttttatt aatcttgcag atattaatcc cataatacta tcaaaaaaac
      841 ttctaattgt aattttacta tgtttggtaa tttatttcat atatcttttt gtttttaaaa
      901 ccttaaataa aagagaaaaa cagcaattaa caattttaat tgttttattc tttgtagcca
      961 cttttttttg gagcactttt gaacaaaaac ctaccgctta taatcttttt gcgcaagatt
     1021 ttacaaatag aaatattttt gattggaaaa ttccaacaaa ctggtttcaa tcttttaatc
     1081 caatttttat catcatactt gctcctatag caagttatat ttggatattt ttagagaaaa
     1141 aaaatatata tttttcttcc attggaaaat ttactttagg aatattattt gccggcattg
     1201 gttttatgat gatgaccttt gcttcacaaa atctaataaa caacaatggt ttgccaatat
     1261 ccatggtttg gattatcata agtatattct ttttaacact tggggaatta tgcgtgtctc
     1321 ctgttggact ctctataatg gctaaggttg cccctgattt aatcaaaaat caaatcatgg
     1381 gactttggtt tgtagcaagt gcacttggaa attttgttgc aggacttata ggaggaaatg
     1441 tcaatattaa aaacatcgat caacttccta atatttttgg acaatgcatg tggatgcttt
     1501 ttgttgtagc gcttttactt tttattgcta aaaaaccaat ttataaaatt cttaacgaaa
     1561 aaaataagca attatctaac taaacttaaa atacaaaata caccaaagtt gaaaattgat
     1621 cttaatattt ctttttttat atttgcaaaa aaagtaacat tatgatataa atcatttaaa
     1681 aatattacaa agttatacat attttttaat ttcttgtcta taatttataa ataaaaatac
     1741 acaaaggata taaattgagt aaaaatgtaa aaaatttaga tacttcattt tttggacatc
     1801 caaaaccact tttatctctt tcactcactg agctttggga aagattttct ttttacggaa
     1861 ttcgtccctt gctttacctt tttatgatag caagttttga aaaaagtgga atgaacttaa
     1921 aacctgaaga agcaagtgca attatgggaa tttttgcaag ttgtttatat cttgctgctt
     1981 tgccaggtgg atggcttgcg gataattact taggacaaaa aagagcaatt ttactaggtg
     2041 ctttaactat agcatttgga catttgtgca tagccttttc ttattttaac aataaaataa
     2101 tttttgttgg tatggttttt ttggttatag gtacaggact ttttaaaact tgtgcttctg
     2161 taatggttgg aatgctttat aaaaaaaatg atgcaaggcg tgactctggt tttactcttt
     2221 tttatatgtg ctttaatttt ggtgcttttg tagctccttt aatttgcggc tttttacaaa
     2281 aagaatacgg atggcatttt ggttttggtg caggtgggat tggtatgctt ttagcggtaa
     2341 ttattttcta cctaaaaact atgcctgatt taaaagaatt tgatgaaaaa gttggcatag
     2401 actctacttg ggatagacca agcaaaaaaa gcaaaaacgc attttacatc atcattgtat
     2461 caggtattgt tttgcttgga gcaatatttt taatccttgg tggttttata aaattagatg
     2521 cacaagttat taataaaaat attattctaa ctatcttagc ttgtgctgga atttattttt
     2581 tatatctttt cgcttttact tctttaaaaa tagaagaaaa aagaaattta attattttta
     2641 ttgttttatt tttagcggct gcgttatttt ggtcagtata tgagcaacaa tacacttctt
     2701 ttaatttttt tgcagaaaaa ttaacggata aaaccatatt aaattatgaa attcctacaa
     2761 tatggtttca atctcttgga ggtttatttg ttatactttt tgcacctttt agtgctttta
     2821 tatggactat atgtgccaaa aataataaag aaatttcatc tattattaaa tttgcattag
     2881 gacttttggg tgcagctttg gcatttttaa taatggcttt agcttcaaat catgcaatta
     2941 gtttaaatgg cgatgctaat acattaagag aaaatttaga aaattcatca caaattattt
     3001 tagtttcacc ttggtggctt gtcagtagct ttttgcttat ggttttagga gagctttgcc
     3061 tttcccctgt gggactttct ataatgacaa aaattgcacc taatttaatt aaatctcaag
     3121 tcatgggact ttggtttgta gcaagtgcat taggcaatgc tttagctgga ttcataggtg
     3181 gtaaagcaag tgaagaaaat atagcttatt tgccaaattt attttaccaa tgtatgtgga
     3241 tattacttgg tgctgttata attttactta tactcaaaaa acctatcaat aaaatactaa
     3301 aaaattaata ttaaggagaa aatatgagta tttacaaaca aagagtatta gaacttagaa
     3361 gattaatgaa agaaaataat attgacgcct atctcatctt aagcgcggat cctcatttga
     3421 gcgaatattt accagaatat tacaaaaaca gagtctttat cagtggcttt aagggttctg
     3481 ttggaacagt tcttatcaca caagaagagg gctttttgtg ggtagatgga agatattggc
     3541 ttcaagcaca aaaggaatta gaaggtagtg gcatactttt acaaaagcaa gatgttaaaa
     3601 atacttttac caaatggttg gaaaaaaatt taagcgaaga tcaaatttta ggcatcgatt
     3661 ttgcactttt acctttatct ttgcaaaaag atttacagat taattgcaag gcaaatttaa
     3721 aacatataga tttgataagt ccactttgga aagatcgtcc cactttacca caagaaaaaa
     3781 tttatgaaca cgaactagaa tactgctctt actcaagaaa agaaaaatta gcattagtgc
     3841 gtcaaaaaat gaaaaattta aatgttacct ctcatttaat ctccagcctt gatgatatag
     3901 cttggcttac aaatttaaga gggaatgatg taaattataa tcctgtattt ttaagtcatt
     3961 tgctaatctt ggaagacaaa gctttgcttt ttgttgatca gaaaaaagta aattcagaac
     4021 ttgaaaaaaa attaaattta gatgggtttt ggcttaaaaa ttatgatgaa atcatcatgg
     4081 agcttgaaaa acttgcaaat acaaatttgc ttattgaacc ttcaaaaatg accgctttac
     4141 tcataaattc tttagacaaa agcgtaaaaa tcattcaaga aattaatcca agcactcact
     4201 taaaagcagt taaaaataca aaagaaatag cgcatataca agatgctatg atagaagatg
     4261 gagtggcttt atgtaaattt tttgcatggc ttgaagaagc gatagaaaat aaagaattaa
     4321 taagcgaatt agacatagat gctaaagcaa gcgaatttag agcacaaagc aagcactaca
     4381 taagtgatag ttttgccact atagcaggct ttaacgaaaa cgcagcatat ccacattata
     4441 aagccacaaa agagagtttt gcttatctta aaaaagatgg gcttttactt attgattctg
     4501 gtggacaata taaaaacggc acaacagata ttacacgcgt tgtaccaata ggaaaggcta
     4561 atgcagaaca aattcatgac tataccttgg ttttaaaagc acatattgcc atttccagtg
     4621 caatttttcc aaaagatata gctatgccct tacttgatgc aatcacacgc gcacctttat
     4681 ggaaagaaca aattgactat atacacggca caggacatgg cgtgggatat tttttaaatg
     4741 tccatgaagg tccacaagtt ttatcttatc tatcccctgt gcttgaaaaa acaaaagcca
     4801 aagaaggtat gctaacctcc atagaaccag gtatttataa agtaggtaaa tggggtataa
     4861 gacttgaaaa tttagttatt cataccaaag tagaaaatcc taaaaataaa gattttggag
     4921 agtttttata ctttaaacct gttactcttt gtccttttga aatatcttgt attgatacaa
     4981 aaatgttaga tgaaaaagaa aaagaatggt taaacaatta tcacaaagaa gtatttgaaa
     5041 aactttctcc taagctaggt gattatccaa aagctctagt ttggcttgaa aaaagaacaa
     5101 aagccatctt ttaagatact tttgttaaca tagataaatt ttccttgtat taaacttata
     5161 atttgtttaa tacaaggttt ttaaaccaat tgctaaaaaa gttttttttg aaaaactcaa
     5221 tttacaacta aaaattattt aaaatatcca agttcaatca ttttttgata aattttagct
     5281 acagttgccc ctgaagtaat atttctccca ccatgttcca aaagaacggt aactacatat
     5341 tttggcttag aataaggagc ataagaagta agccacgcat gagatctagt ataatactca
     5401 aattgttttt catcgaccct atttttatct gtttgtgaaa atcccacaac ctgagcagtt
     5461 cctgtttttg ctgcaacttt cacatcaaga ttatgcaaat aacgataaga agttcctcct
     5521 tgctcattag caacagcata cattgcatct cttatataag gcaattgact cttttcaaat
     5581 aaagtaaaaa tttctttttt attttcatcc atttgatttt ctatagttgt attattatta
     5641 ttttctatgc tttttaaaaa atgaggtata acctctccac cttttgcgat ttgagccgta
     5701 tatctagcaa tttgcatagg tgttgcaaga aaattacctt gacctatagc tgtatttaaa
     5761 gtatcacctt gaaaccaaga ttgtctatat ctttgcatct tccattcttt gcttggtaaa
     5821 gttcctacaa attcactagg taaatctacc cctgttttcg ctccaaagcc aatgcgagat
     5881 aaagtttcac ttatttgatc gattccaact tgcaaactgc cattataaaa ataaacatca
     5941 caactatatt ttatcgcatg ttttaaatcc acaggtccat ggcccgatcg attccaacat
     6001 ctaaaaaacc tgcctccaag ctcaatgctt ccattgcaaa catattgagt cgacgggcta
     6061 atatttttag aatttaaaaa agaaagccct actcccattt ttacaacaga acctggagga
     6121 taatatccat ttataagttt atttgtaaaa ggatgatcaa gactatttga aagctcatcc
     6181 caatccttaa aagaaatccc tgttacaaaa ggattaagat catattcagg gaaactccct
     6241 gcagctaaaa tagatccatc atttacattc ataattatag cagctccagc attcccttca
     6301 aacaatgaag ttaaataaga ctgaagctct atatctatcg taagttctat atcattagac
     6361 atagcaggag tgtaagaaag ctgttctact tcttgattta aggcattaac cttataaacc
     6421 ctagttcctt tttctccttg taaaatatca ttataatagc gttctatacc gctttttccc
     6481 gtatagttag aaagttttgc tatttcattt tcttgaacat cttgcaaatt tgccttacct
     6541 acatacccaa taatatgcga agccaatttt ccaaaaggat attttctttt tacaacagga
     6601 tctattttta ttgttttatt aagatttaac tctgaataat gcggaataat ctcatcatag
     6661 ggtataaaat ctactacttt aataaaatct tgattatagt aagaatcatt tctcttataa
     6721 atttctgcta atttactagc atttaaatcg ggaaataaat ttgtaagttc agataattct
     6781 ttatctaaaa ttcctttatt tgacttttta atactcaaat aaggtttaat agaaatacta
     6841 aaacccaaat cattaatagc caataaagtt ccatttctat ctgtaatttg acccctaaca
     6901 ggtggtaaaa attcagtttt tatggcattt tgtttagcaa gctcttcata atatacattt
     6961 gattttatac tcaaataata cacacgactt aataaaaata taaaaaacaa tagtataaat
     7021 ccaacaacta aacgcattct catttaaatt ttacctttaa aaaacacata agctaaacaa
     7081 cattctataa aaactgaaac aatatacgcc catcctaaaa ttttaatttt ttcatctcca
     7141 atataagaca atatcatatc caaaaacaaa ataatgccgt aagcacaaag cacaaaaaca
     7201 acagggataa atttaccaat ttttaaattt gtcttaatcc aatctgcaca aagataataa
     7261 aaaataaaaa atgccaacca agatgaaaaa ataaaaaaat tataagttat atcagtaaaa
     7321 aataaaaaaa ataaagaaaa ataccatcta aaatcaagct ttgaaaaagt tctttctctc
     7381 tcttctagta agcaaaacat ataacagaaa aaaatcccat aaagtaacgg agcatataca
     7441 aaagtcgaac caagaatctg atagattaga aaaaaaaatc ctaaaaagac ataagctcca
     7501 ttaaattttg ctttataagc acttaaattt cttctcattt accaagacct aaagtttgat
     7561 cgataataat atcttctaaa gaatcaaggc caaatttatt caaatttgaa actaaaatag
     7621 agtctttaaa ttcatttttt aacttagctt tttcactttg atttaattta tcgcatttgg
     7681 taaaaacttt taaaattttt tgatcaggtc gtaaaaatct tttcaaatag tcatttaaat
     7741 ttacatcgat ctctaaatga gtatgtcttg agtcgattaa atgtataaat aactttatcg
     7801 aggttcttaa ttttaaaaat tcatctaagt tttgattcca tatttctttt aaatttttag
     7861 aaacctttgc ataaccaaac cctggcaaat cgataaaatt gatattaaat ttttcttcat
     7921 ttcttttaca agttacttcg aaaaaattta taagctgagt ttttccagga gttgccgaac
     7981 ttttggctaa atttttttgt ttacacaaag aattgattaa agaacttttt ccgacattgg
     8041 aacgccccaa aaatgctact tcactaaaat ttgagctcaa attctcatca aatttcacta
     8101 aagaagtgat aaatttagca ctaattatca tttgtcttta agatcaaata caaaacgagc
     8161 aggtttttga tccttgctct ctactcgata aatattagct tttctatcga ctattatttt
     8221 atcaccaaaa agtttttgat tgcttccaag ctcatttata taagcatggc cattaatctc
     8281 gtaagtatct ttaataacat tataaataaa tttatctcca ctacctttat aagttttacc
     8341 ttttaaaaca atcttaaacc tagcgttttg cattgcttca taacgaatag gtttgcgatt
     8401 tttatccgta taaataatca atttttcaga atttaaaata tcatcacccc taattacttc
     8461 tacatttcca ctaagaatac tttcaccctt attttcatct gaataaaaat ttaaagcttt
     8521 tacttcaatt tgagttgccc aagttacact tacacaaact aacaataaaa ttatttgtct
     8581 tgcaaccacg cgtttactcc ttggatattt aaaattttgt tttttacatc atagtttaaa
     8641 gtatttccgt taataatact tccattaatt agagctttaa aatcagtatt tgtatataga
     8701 actttattct taggttcgta ttctacctct tgggaaataa ttttgacatt attagcacct
     8761 atataagtaa catttccttc aaataaaacc ttgctcatat ctttattaaa aaattctaaa
     8821 cgatttgcac taagattaaa atctaaattt aaagtaataa aatcattaaa ttcatctcta
     8881 tctgcatatc tcacccaaga atttgcctta taatatgcct taattgtact agtattactc
     8941 tcataagctt tcaaattttt agcctcaata tttttaaaat ttaaagcatt agtttgcaaa
     9001 ttcaaagaat atggatcttg caaacttaaa atcgtaaaag taattgtaaa aagagcaatt
     9061 aaaattccaa aaatttttat agccaaagct tattccattc ttcttctaga tgattttttt
     9121 ctactaaaat ttctatcatc tgtgctacag cagccttacc accttttttg ctaagcacta
     9181 tgtctacatt taaatcttta tgaccatctt ttggcttaaa actaagtcct acactttcaa
     9241 gcaaagcctt atcgttaaaa taatccccaa tagccgcaca ctgagaaaaa tctaaattaa
     9301 gtttttgtaa aatttctttt gcacaagcta acttatcctt gatgccttga tataaaattt
     9361 ctatttttaa atctttagct cttttttcaa cacaaggaca atttctacct gtaataatag
     9421 caattttttt accaagcttt agccaagcct cgatagccgc tccatctttt acatcaaatt
     9481 ctttaataaa ttctccatta gaagtataaa taatcttccc atcagttaaa cagccatcta
     9541 catccaaaaa aatcaattct gtcataattt ctactctctt acaacaaatg cacctgcaaa
     9601 tgcaccactt gcagcaaaat ctcttgcttc atcttcactt ctaaagcctg ttaagaaaac
     9661 gcgatttaac ccatccactg agcttgtgcg tatagtagag ctataagttc tataagtttt
     9721 atatcttgct gctatcgttt gtgctccagc tgggttttta aaggctccaa tttgaaccat
     9781 gaaatttcca ccttcataaa tttgtccatt atttgcaatc tctccactat ttccatagtt
     9841 tacattagaa tgtacaatat tattacccga attacttgat ccaaacccta taacctcaag
     9901 ccttactgga gctgttcctg aagcaatcat atcaatttga ctagcagctc cttttgataa
     9961 atctataata cgattattta caaaaggacc tctatcattc acacgaacgg taacttgacg
    10021 attgttattt agattggtta cttttaagat ggtattcata ggtaaagttt tatgagccgc
    10081 ggttaaagca ttttgattat aggtttcgcc attagaggtt ttcttgccgt gaaagcctgg
    10141 cccataccaa ctcgcaatac catcagcagt ttcgcctact gctacaacag taggataata
    10201 agttttaccg ttgatagtat aaggcttcat tgttccttta gtccctgaag aactaggact
    10261 gcttttaaaa tcatttgaag gataatacac ttgagcatta tccaagctag aaaaaaaact
    10321 agtgcctaaa caaccactaa aaaataaagc ccctagacta acggctgaca actttagtgt
    10381 aattgttttt atttgcattt ttattctcct tgattggtat aattaatttt tgattaatgc
    10441 taagatgatt ttttgctatt ttattgaatt ctcgaatttc atcaacactt atattataat
    10501 tttttgctat tttatataaa gagtcaccag acttaacggt ataagttctt gtcataggta
    10561 tagttgtatc aacctttgca agtttttctg ctttaaaatt tttatcaaaa aatgctactt
    10621 tattaagtgg tatatacata taataccctt taccaggagg cgtaaaatta tgtttaaatt
    10681 gtggattata tttcttaaaa gttgcaagat ccatatttaa atttttagct atttctttta
    10741 aagatgcaga agaaggcaca tcaacttttg caaattcatt gcttaaagca taattcatta
    10801 aagacgcatc tttatctagt aaaaaatccc tatcattagc taaaaaagca agcgttaaaa
    10861 tctttcttat aaaatttcta gtttctaaag aaagatattt cttatcaggg ttcaataaaa
    10921 cacttaaatc atcacttcct gcttgcttga tagcttgtct tagcttgcca tttccgcaat
    10981 tataagctaa aagtgccaaa taccatttgc caaattcttc ttttaactct tttaaataat
    11041 ttgtagcggc ataagttgac ttgaccggat cacgcctttc atcaacataa gcatcgattc
    11101 ttaaacccaa atttctagct gttggttgca taaattgcca aacccctaca gccttggcat
    11161 tagaaacact atgagttttc aagcctgatt caaccatagc tagatacaaa atctcatcag
    11221 gaacttcctg ctgggataaa atttttctta tcataggagt aacttttgaa aaattttgca
    11281 tactatctat taaagtttga gcatgttttg attttatatc ttgttgagtt tgcacaaaaa
    11341 tcaaatcact aataaaactt ggattaatat ctaaatttct taaaacattc atttgtcttt
    11401 cataaaattc aggagtatta atttgtgcaa aaagaaaatt aaaacatatt aaaaaacaca
    11461 ataaattttt tttcattaat aacctttaaa aaataatttt tcagaattgt taaaacaaat
    11521 ttctagaagc tcttttcttg ataaattcaa tacttcacac attttgtttg ctacaaattg
    11581 agttaacaaa ggttcatttc ttttaccgcg ataaggctct ggagtaagat atggagcatc
    11641 agtttcaagt agtagtctat cttttggaat tttaggtaaa atttcaacta atttcttagc
    11701 atttttaaaa gttaaaactc ccccaatacc aaaataaaat ccatcttcaa aaagagttag
    11761 caaatgttcg cttgcattaa agcagtgtaa aactcctcct acaagatcct tagaataccc
    11821 atgtaaaatc tcataagtat catgatttgc ttctcttgag tgaatgataa caggtttttt
    11881 aaattcaata gcaagttcaa gctgtgcgat aaaaatcttt ttttgatttt ctttttcttt
    11941 ttgaatttct tcagcaagat cacttttaaa acggaaataa tcaagcccac attcacctac
    12001 agctacacac ttttcatcgt ataaatactg ccttaaaatt ttctcatcat aattatcaat
    12061 ttcataagga tgcaccccta ctgcaaaaaa aatattttta tatttatgag caattgtagc
    12121 tgcatagggc aaatctttta tatcagcacc aggtatgatg attttctcta taccattttt
    12181 aaaagcacga tttaaagttt catctaaatc atctttaaat gcttcactgt ctagatggca
    12241 atgtgtatca acaatcctta aaccatcttg aaaatcaaga tttaagaaca tacttcaact
    12301 ctatccttgc cattatcttt tgcttgagac aatattttac ttgctttatc aaccaaagaa
    12361 tcaatcttat ctccactttt tccaaaaacc acgcctatag aagctgtaaa aaagacttca
    12421 tctaaattaa ctaaaacacc agcctttttt atatttactc gtatacgaga aaagatttta
    12481 atcgctcttt cttgggatat atttttaagt aaaatacaaa ttttttctgc actatatcta
    12541 cctacaagat ctcttccttt agtttcattg actatttcat tagcacagat tttaattact
    12601 tcatcaccaa cttcacgacc gtattcatcg ttaatcattt gaagattatc tatatctaag
    12661 aaagcaaaag caaattcctc gtcttttgtt gctatttcgt taaaataatc atctattcca
    12721 tcgattaaag cattataatt tttaacccca gatacaggat ctaaaacatt ataagtgctt
    12781 aaaaattttt tatcatccat gtaagataaa caatgatcta agcgacaatt aaaactttct
    12841 ttgcttaaag gcttaaacaa atactcatta actccatttt taaaagaatt cgcttcaaat
    12901 gaatcattat gatcccccaa aagaatcaca cctaattcat catcactaaa acgttctctt
    12961 acttgaatca aaagctcaaa accgctaatt actggcatat tgacatctgc tataataagc
    13021 ttaacatcat tattatcatt taaataactc attgcttctt caccatgagc tgcagctaaa
    13081 acattaaatt gtctttgagt aagtattttt ttaatttcat tacgttcagg tagcttgctc
    13141 atagctaaaa tcactttagt ttttgcatat tgattaagtt ttacaataga actaataatc
    13201 tcatcaatgc aagtttcact ttctttaaaa atataatcta atatatcttt atccataaat
    13261 ttttctttag tagccttatc accactagct gtaagaacaa tagcaggaat tttcttttca
    13321 ataacataat ccacaacttc accatttggg gcatctggca aacataaatc cacaaaagct
    13381 aaaaaataat cattattcat taattcctta gcttcggcaa aaccaaaagc aatatctacc
    13441 tcataatcta aagtcatttg aattttttta gctaaaagtt tgccgagcat tttattgtca
    13501 tcaataatta aaattttctt attcatagtg tgtaaaatac ctttatatct aaaattttta
    13561 atatatttgt ttcaaaagaa aggaaatttt atagttgtat attttaacat agcaaaataa
    13621 aaaatccgct taattcttaa acaaggtctt agcaaattcg attgcttcat aactaacaag
    13681 ctctccactt accatcctag caagctcttt aattctttct tcttgatcaa gcttttttac
    13741 cttactttct tcgccatttt tttcaactaa aaaatgatta tgcgccttag aggaaagttg
    13801 aggcaaatga gaaatagcaa aaatttgata aaacttagaa agctcctcta aaaccttggc
    13861 tatactcata gcctcttttc cgcttaaatt tgcatcaatt tcatctaaaa ataatatccc
    13921 tttacctgca tttaaaattt tacattctgt ggctataaaa gcaagtctta agcgatttaa
    13981 ttcacccgaa cttaaatttt ttaaatgagc taaattaata tctagtatta tctcatcttt
    14041 acctaaaatt gaaatttttt cattttcttt aagtgtcaaa cttgcgtctt tcatataaag
    14101 atctttaaga taattattta aacatttttc taatttttta aggtttttct ttcttgcttg
    14161 agttaaaatt tgtgcttttt cttctaattt ttgttttaat tcttgaaatt ttttttcaag
    14221 ttcttttttt tcaaaactta aattttcata atgttctagt tcatgttttt tttgttttaa
    14281 aacttctaaa gcattttcta tgctttcata acgcttgatg agataggata aattttcaat
    14341 gcgatctaaa agtgtctcca catcaaaatc caaatcttcc attttttgat tttcgcaaat
    14401 cacacgcaat tcatttaaac attcactaaa aaaactcgga tcaacttcgc ttaaatttaa
    14461 agcttcaata acaacttttt caagctcaaa aatatgctct gtcttactcc aagcttcttc
    14521 taatttatct tttttagaaa gctttttttt aagtattaaa agctcttcat actcacctat
    14581 tttaggatta atgcttgaaa ttttttcaat ttgtactcta gctaattctt ttaattcttc
    14641 tacttttttt tcttcttcta aaattacatt aaactcatta gaaatttgac tataagcatt
    14701 aaaatctttt ttaaaatctt ctaaaaagga aacaaaattt gtattttctt gcatctccaa
    14761 ggcatctaag agatttaaaa atttttcatt tccaaattcg ttattttcct ttgcacttaa
    14821 atacttaata aaagttttac ttaaattttg caaacttttt ttcgctatgc tttgattgtt
    14881 aataaaatat tttgtgtttt tttcttttaa aagcttaaaa acattctcct cttcactttc
    14941 tataccaaaa ctttctaaat ccaacttatc atctagttct atttcgacaa ttttagcctc
    15001 actttcactc aaagaaaatg cggataaaat tcctttaaac aagaccgatt ttccagctcc
    15061 acttaggcct gtaaaaacgg taagcccttt agaaatttca agctcagcct ttttaaaacc
    15121 aagattttct ttcataaaaa ttctatttat catcaatttc cccagtgtaa tttttctttt
    15181 aaaatttgaa aataatccct attttttggg tgaattaaag ccacattttt atcacttaaa
    15241 cccactttta tacttttaaa atcattcatt ttataatttt cttgcccatc aatacaaagt
    15301 atacaatcct ttgccataat ctctatttca aaaccttttg gcaaaacaat agggcgttgt
    15361 gttaaagaat gagaacaaac aggagttaag ataaaagctt gagctaaagt ataaactatg
    15421 ggcccatttg cacttaaatt ataagctgtt gaacccgcag gagttgcaac aataagccca
    15481 tctccaaaat attcattaaa tttcttttct tttctaaaaa cttctatatg agccatagaa
    15541 gcttgattgt ttttactgat aaccacatca ttaaaagcca atttttctaa gatttttcct
    15601 tgcttatctt ctaaaaaaac acttaacaaa taaggctttt ctattctaaa ttctccttga
    15661 aaaaaagctt gaaaaaaatt ttcagcttca tcaactttaa aatctgttaa aaaacctaaa
    15721 tgtccagcat gaattcctaa aactgcttta tcatattcac aagctttacg acataaagaa
    15781 atcaaagttc catctccacc taaagaaata acaaaatcag atattttaaa caaatcatcc
    15841 aatccatact ttggcaaatc taaaatttca gaactttctt taaacaatac aagctcaact
    15901 ttatatatag ataaaatcga ttgaagtttt aaaatttcct tatctaaact cacattgggt
    15961 cgtgtaacaa gtccgatttt tttaatattt ttataatcta ttttattttg cataaaaaat
    16021 tatatcaaat cttagcaaag caaaagaata aaaatactat aattttgctc attatcttaa
    16081 aaaatctttt tcaaggaata aatttgcgaa gtcattataa tacagacttg ggaatttccc
    16141 atgttggtca aagcgttaaa ctttgcggtt gggtaaatag ctaccgcgat catggtggag
    16201 ttatttttat agatttaaga gatagaagtg gtattatcca acttgtttgc gatccaaatg
    16261 atagcaaaga agctcatgaa atcgcttcca atgcaagaaa tgaatttgta cttattgcag
    16321 aaggtactat tcgtccgcgt ggcgaaggac ttgtaaatcc taaattaaaa acaggagaaa
    16381 tcgaagtagt tgtttctaaa cttaccatag aaaatgaaag tgccgtacct ccttttgcta
    16441 tcgctgatga aagtgtaaat gaagaattac gcttaaaata tcgcttttta gatttaagaa
    16501 atcctaaact ttatgaaaat tttgccttgc gttctaaagc ttgtatagca gctagaaatt
    16561 ctttggcaaa tatgggattt ttagaagttg aaacccctat tcttaccaaa gctactcccg
    16621 aaggtgcaag agattatctc gtgccttctc gtgtgcatca gggtgaattt tatgctcttc
    16681 cacaaagccc tcagcttttc aaacaacttt taatgtgtag cggttttgat cgttattttc
    16741 aaatcgcaaa atgttttaga gatgaagatt taagagctga tcgccaacct gaattcacac
    16801 aaattgatgt tgaaatgagt ttttgcgaac aaaaagatgt aatcaatgta gctgaaactt
    16861 ttttaaaaga tattttcaaa gcttgcggca aagaaattca aacccctttt agacaaatgc
    16921 aatacaaaga cgctatggag aattatggct ctgataagcc ggatttaaga tttgatctta
    16981 aatttattga tgtgattgat atttttgcta agtcaaataa tgaaattttt gcaaatattg
    17041 ccaaagatac aaagaaaaat cgcatcaaag ccatacgcgt tccaaaaggc gatactattt
    17101 tttcaaaaag acaaatgcaa agatttgaag aatttgtgcg taaatttggt gcccaaggct
    17161 tagcttttat acaagttaaa gaagatgggc ttaaaggtcc gctttgcaaa ttctttagcg
    17221 aagaagattt aaatgagcta agcaaacgct gtgagcttga agtaggagat gtggtatttt
    17281 tcggtgcagg agctaaaaaa accgtgcttg attatatggg aagatttaga attttcttag
    17341 ccaacgagtt aaatcttata gatccaaatg ccttagaatt cttatgggtt gttgattttc
    17401 ctatgtttga acaaaatgat gatggaagtt attctgcgat gcaccatcct tttaccatgc
    17461 caaaaaatat cgatgagact gatttagaag aaatttcatc tattgcttat gatgtagttt
    17521 taaatggcgt tgagctaggt ggaggtagta taagaatcca taaaaacgat attcaacaaa
    17581 aagtatttaa acttttaaat atcgatgaag aacaacaaaa agaaaaattt ggcttcttgc
    17641 ttgatgcttt aagttttggt gctccaccac atggaggtat cgctatagga cttgatagac
    17701 tcatcatgct agttacagga gcaaacagta taagagaggt tatagccttt ccaaaaaccc
    17761 aaagagcgca atgcttaatg acagatgcac catcgcctgc tagcaatgaa gcaatgagag
    17821 aattaggaat caaattaagg gagaatataa aatgaaagaa ttgtttttaa tcataggtgc
    17881 accaggtagt ggaaaaacta ccgatgctag tttaatcgca caagcagatg cgacaaatat
    17941 cacacactat tcaacaggag atcttttaag agctgaagta gcaagcggga gtgagcttgg
    18001 aaaaactata gatagtttta tatccaaagg caatcttgtt cctttagatg ttgttgtaaa
    18061 tactatagtt tgtgctctaa aagctgctcc aactaaaact attatcatcg atggttatcc
    18121 aagaagtgta gagcaaatga tggaatttga taaggtttta agtgagcaaa ataaaatttg
    18181 tcttaaaggt gtcatagaag taagagtaag cgaagaagtt gccaaagaaa gagttttagg
    18241 cagaaatcgt ggtgcagatg ataatgaaga agtgttttat aatagaatga aagtttatac
    18301 agaaccttta aatgaaattt tagattttta tcaaaagaaa aaacttcatt ttattatcga
    18361 tggggaacgc actatcgaac ctatcgttgc agacatgaaa gaactgatta aaaaaattca
    18421 aagtatataa ggagaaaaaa tggatttaag caaaatcaaa atcggagata ttccaaataa
    18481 aatcaatgcc gtaatcgaaa ttccatacgg ctcaagcatc aaatacgaaa tcgataaaga
    18541 tagtggtgct atcatggtag atcgcgttat ggctagtgcg atgttttacc cagcaaacta
    18601 tggttttatt gccaatactt tggctgatga tggtgatcct gtggatattt tagtgcttaa
    18661 tgaatatcct atccaagctg gagccgtgat tccttgtcgc ttaattggtg ttttaatcat
    18721 ggaagatgaa agcggaatgg atgaaaaact tcttgcagtt ccaaattcaa aaatagatgc
    18781 aagatatgac aatataaaaa cttacacgga tttaccacaa gcaactttaa ataaaatcaa
    18841 aaatttcttt gaaacttata aaattttaga gccaaacaaa tgggttaaag tacaagattt
    18901 taaagatgaa aaagctgcaa ttgaaatttt agaaaaagca atcaaaaact acaaataatc
    18961 ttagcccttc aaagggctaa actcaaggaa aactcgcaat gaaaaatatc gttttaggtg
    19021 gtggttgttt ttggtgtgtt gaagccgtat ttgaacgcct aaaaggtgta atcgatactg
    19081 aagttggata tagcggagga aatccaaatc ctagctatga aagcgtgtgt aatggtgatg
    19141 gtaacataga agttgtcaaa ataaattacg atgaaaaaca aatctctctt cttgaaatct
    19201 taacactctt ttttaaaatt catgatccaa caagtataga taaacaaggt ggagatattg
    19261 gtatacaata tcgctcaata atcttttacg aaaatgaaga agataaaatt ttagctcaaa
    19321 atttcatcga agaacagcaa aaaatattta gcaaaaaaat agttactaaa atttcaagat
    19381 tgcaaactta ctacaaagct gaaaactatc atcaacatta ttttataaat aatcccaatc
    19441 aaggatattg tcaagctgta atagctccaa aactgcaaaa aatacaatca ggctaatttc
    19501 atctttttaa ggttaaaaaa aattcaactt tattcacagc cttttcacgc tgtgattttc
    19561 ttttcaaagt acttaaaaat agaactttaa gctttaaaat aaagaaaaaa ttatttattg
    19621 ttttttaagt ttttttatga atttgtattt aaatgtgaat aattttatca attaacataa
    19681 tttcctaagt ttagctatga aaaatccatc atagtctaag cttggtaaaa tccgtctgca
    19741 ttttgaaatt tcagcaaatt cttcactttg ccctgcttta gcctcaacat tttccaaatc
    19801 aatatctaaa agctctaatt taaactcact ttttaaagca ttctctatca cttcttcatt
    19861 ttcttctttg gtaaaggtgc aagtactata tacaagctct ccacctattt ttaatgcctt
    19921 taaagcagaa tgtagaagtt ttttttgagt ttttgcaata tttttgattt ctttataact
    19981 tttttccaaa tcaaaaccta ttttagcaaa agtcgaacaa ggtgcatcaa gtaagatttt
    20041 atcaaatttt aaaggacata aattgcctat atttttacca tctttcataa aaactttagc
    20101 attcacgccg taatttttaa gatttttttg caaaataaaa aatctatccc tactcatctc
    20161 attgcaagct aaataacctg tattttgcat aaaatttgca agattgatac ttttaccacc
    20221 cggagctgca cacatatcaa gaaccctttg ccctgctttg acttctaaat ttaaagcaca
    20281 caaataagaa gaataatttt gtatataaaa gtgcgcctca ttaaaagctt tcatagaact
    20341 taagatagcc ttatctttgg catcaaacaa ataacaataa gcattgatct ttttaaattt
    20401 taatttttgt tttaaaaatt ctttttctaa ttcttcaatg ctaattttta aagtatttgc
    20461 aaatacacaa acattttttt cttgagtaaa agaagataaa atattttgca tttcatcttt
    20521 ggtataaagt ttttctattc tagagagcaa aataatcctt tatcatgata aaagcggata
    20581 aagagtctaa tttaccatct tttttgcgtg tattggctac gccgtatcct aaagcttctt
    20641 tgcttgttcc gctttcatct acaaagcaaa tttctttatc aaattcaagc aaagaaacaa
    20701 aatgcttaat gcgtcttgtc atttcttctt cacttgatcc acccttagga atgccaacaa
    20761 tgagtaaaga aatctcatgt attttaagta aatttttaat ttcattagcg gcttgattgc
    20821 gattttttct taaaactgca tctaaaggca aagcgatctt tttatctatg caaagcgcta
    20881 cacctatgcg ttttaaacct acatctaaag ccaaagctct catgctaaaa cccttataaa
    20941 aagcccttct atggaaattt ttccctcaag ttcatattca taaacttttt gtccataaat
    21001 ttttaaagcc tcatcaacac tcacaccttt tttacaaaac tctaaaaact catcttgatt
    21061 tatatctata cttgcaaact cacttacaaa ttctttgaaa tcacaaatca attttgcttt
    21121 attttccttt aaaagcaaat tagtccctgt actttctcct agtctttgcg gtaaaacata
    21181 taaaggttta ttgagttcta aagcaagttt tgcactttgc atagaaccac tttttatatc
    21241 tgcttgtgca actacaacgg ccttacttaa agtaataacc aaacgatttc ttagtaaaaa
    21301 gtcataattt tttggcaaat aatcatcttc gtattcgctt aaagccaaag cattttcata
    21361 aatttgttta atgatttttt cattagttct tggataaatt tgatccaaac cattagcaaa
    21421 aatacctata gtatttggca tagccgccat acttgcggtg atatccacac ccaaagcacc
    21481 gccacttacc acacaaagat gagcattttt aagcatactc gctaaggaaa aaacacaatt
    21541 tttcgtataa acactcatac gccttgaacc tataatagca attttatctt gttttaataa
    21601 agataaattt cctttatagt gtaatttttt aggaggcttt tttaaatctt taaaaagttc
    21661 taaaaattca tcaggcaaaa tttcacttgc cataaatttc actcaaatac acaagatcaa
    21721 cgctttttaa caaatcttta ctttgctcta aagctttaaa agtatttttc ctaggatgtc
    21781 ctatggctat aacaaaacct tttttttgtg caagttttac tgcattttga atttgttttt
    21841 taacataatt aacatcatct tcattatcca aaaacacatc tctttgtata taaggaacat
    21901 ttaactcttt ggctatttta tttgctttag aatttcctat agttttagaa tctacaaaaa
    21961 atatattttg attttttaaa acctcataaa gctttctcat agcttcttca ttgcttgtaa
    22021 ataaacttcc cgtgtgatta ttgatgtatc ttaaatcctt aaaatctttt ttaatttgct
    22081 tgattttttt aaaaattctt tctttgctat catttggatt taaagtatca agttcaggtt
    22141 tattgtaatt aatcgctgct aaaggtaaat gcaccatata aaaatcaaat tttaaagcaa
    22201 gttttggcgt ttcgctatgg tttttatctg gcggaaaaaa agaaggattt aactttaaat
    22261 ttaaagcttt taaacctcta acctgacttg catttgccat atcatcgata ataatagcaa
    22321 gttttggttt tttagaaatt ttatttaaat gaatatcttc attaaaagtt aaattttgat
    22381 cttgggttaa atttgtatct tttggaataa aattttgttc caaactctga ttttgctcta
    22441 aacttaaatt ctgctccaca ctgcttaaat tttgctcatt taaacttgta tttaaatcat
    22501 cgatttcttg aattttttgc tctaaaatac ttacaaattt attattatca aactcattct
    22561 cttgaaaaat accaatttca taatgatctt tatttgatga aattaaatct tcttgtttat
    22621 caataaaata atccggctta acagaagaaa catcttggga attttgatat tttactaaaa
    22681 ttcccaaagc taaagctata caaagtaaaa aaagtatagc tatgattaaa taacgctgaa
    22741 tttgaactaa ttttttcttt gacaatgttt agttcttatc tttatctact aattttttag
    22801 cactgatcca aggcatcatc gcacgcaaat tgcgccctgt tttttctatc aaagaatcat
    22861 tcatattttt gcgttctgca tgcattctag caaaacctgc acggcgttct aagataaaat
    22921 cttttgcaaa aacaccattt tgtatatctt ttaaaacacc tttcatcgct tttttagtct
    22981 cttcagtaat aatctttggc cctgtaatat aatcgccgta ttctgcagta tttgagatag
    23041 aataacgcat atctgcaata ccaccttgat aaatcaaatc cacaatgagt ttcatttcat
    23101 gcaaacactc aaaataagcc atttcaggtt cataacctgc ttcaaccaaa gtctcaaaac
    23161 ctgcttgaat caaagcacta agcccaccac aaagcacagc ttgttcacca aaaagatctg
    23221 tttctgtttc ggctttaaag gttgtttcta taatacctgt gcgtccgccc ccaatcgcac
    23281 ttgcataact taaggctaaa tttttagcat ttttactttc atcttgatgg atggctatta
    23341 aacaaggagt tccacctcct aaagtaaatt catttcttac tgtgtgtcct ggtgctttag
    23401 gtgctatcat gataacatct ataccttttg gagcaacaat ttgaccatag tggatattaa
    23461 aaccgtgcgc aaaagctata gccttgcctt cacttaaatt tggttttatt tcgacattaa
    23521 aaatatctgc ttgaatttca tcaggagcta aaatcataac cacatctgct gtcttagaag
    23581 cttcacttac actcattact tcaaaaccag cattttttgc tttaacagca cttacactac
    23641 cttcacgaag tccgataatt acatttacgc cattatctct taaattcatc gcatgagcgt
    23701 gtccttgaga gccaaagcct ataattgcta ctttttttga tttgattaaa tttaaatcac
    23761 aatctttatc ataatatact gtaatagcca tattcactcc ttaaaaattc aaaaattaaa
    23821 ggtattatta tagcaattaa agtataaatt tcatattttt tttataaact ttatgtaaga
    23881 attttacaaa aaatcataaa gtatcaaaag tgaaagaatt tttaaacagt cttagttatg
    23941 gcattagccc tcatgaagca agcaatgaat ttaaacaaat tttaagagag cttttagcta
    24001 gtcatatcat caaagaacac aaaaacaaat attatcttaa taatggtttt gcctttggag
    24061 tgcttgatat ttcaagcaaa ggcacaggtt ttttacaatg ctttgatgaa agtttcaaaa
    24121 aagatctttt gatagaaaac aaaaacctaa aaggtgcaaa ctataaagat atagtcgcag
    24181 taaaacttct acctttaaag aaaaaacgcc ctagtgcaaa ggtgatttta gttctaaaaa
    24241 gagccaatga aacctcttta gtaatcacca aaaggtacgg cgaagccgtg cttggaatga
    24301 atatcaaaac aggattaagc actgccttaa aagcttctca aaaatcctta aaagcactac
    24361 ctttagggac aattttaaaa atagaaaatg aaaataacaa tatcatagaa gttttaggac
    24421 atatcgatga tgaaagcgta gatgaaaaaa tctccttagc tctttttaat aaaaataacg
    24481 aatttagcga cgcttgtatc aaagaagctc tagcaaacgg cgatagtgtt gatgcgagta
    24541 tgtatgaaaa tcgcatggat ttaagagcct tgcctttttg caccatagat cctatacatg
    24601 caaaagattt tgatgatgcg atttattttg acatccaaaa acgagaaatt tatgtagcta
    24661 ttgctgatgt tagcgaatat gtttatgctt atagtgctat agataaagaa gcaagaaatc
    24721 gtggattttc tatttatttt ccacatattg ctatacctat gctaccgcgt cctttaagtg
    24781 aaaatatctg ttctttaaaa cctcatttag atcgcttagc gtattgtttt aaaatcacac
    24841 tcgatcatga aaataaagtc ataaaagaag aactttttga aggtattatc aattcaaaac
    24901 gccgttttaa ttacaatgaa gttgatgaaa ttttgataca aaaacctgat ttaaaagagc
    24961 tttcatggct ttatgagctt tttgaaatca caaaaaattt acgcaaaatg cgtcttaaaa
    25021 atgcctttga atttcgcacc gaagaattaa gaatgaattt agatgaaaat ttaagtctaa
    25081 aaagcacagt ttttgaaaaa gacacgcctt cgcataattt aatcgaagat tgtatgcttt
    25141 tagctaataa agccgcagca aaactcatag atataggtgt ttttagaaat cacttaagtg
    25201 ctgatgcaag aaaaatcgat aagcttttaa atgaattacg cgaactaggc atcgatgtaa
    25261 attttaaacc caatcttcct gaactcatac gcgacataca agctttatcc gatgagttaa
    25321 atttaagagc agaagtagat aaactcatca tcaaagcaca aaaaaaagcg gaatactcta
    25381 gcataaatgc ggggcatttt ggcttaggtt ttgataaata ctcacatttt acaagcccta
    25441 taagaaggta ttctgatctt attttacaca gacttttaaa agccaaacaa aaaaacgatg
    25501 aaaaactttt taattatcta cttttaaaca tagaaagcac ttgcgagaat cttagcacac
    25561 ttgaaagaga ggcggataag gttgcttttg attttatgga tagaaaattt gctagatggg
    25621 cagctaaaaa tataggcaaa aaatttaaag ctttagttgt gcaaaatgat ggagtttgca
    25681 tagctaaact agatgatgaa atcaaaggag cagatataat cctttatgat acacgtgtaa
    25741 atttactaga aaatgttgaa gtgcaaatca tggaagcgga tatagttatg gcaaaaattt
    25801 atgctaaaat cacccaaaga ctcataaagg aagaaaatgt atagaaaaga gcttcaaacc
    25861 ctactttcta aagattcaat acctaatttt ttctttcttt atggagcgga taattttcaa
    25921 agcgaacttt atgctgaatt tataaaagaa aaatataagc ccgatgaaac tttaaaactt
    25981 ttttttgaag aatacaactt cactcgtgcg agtgattttt taagcgcagg atcgcttttt
    26041 agcgaaaaaa aattactaga aatcaaaact tctaaaaaaa ttccaacaaa agatcttaaa
    26101 attttagtcg aactttgcaa aaacaatacg gacaatttct ttcttttaga gctttatgat
    26161 gaaaactcaa agcaaagcga catagaaaaa attttctctc ctcattttgc aagatttttt
    26221 aaagctaacg gagctaaaga aggcgtggag cttttaagca taaaagcaaa acaactaggg
    26281 gttgaaatca ctcaaaatgc tttatttacc ctttttacaa gttttgatga aaatttatat
    26341 cttgctgcga gtgaacttaa taaatttagc ggtttaagag tagatgaaaa aaccatagaa
    26401 caatactgct atagtttgaa tacaggaagt tttgaaagct tttttgagaa aattttaaaa
    26461 aaacaagact ttaaaagcga acttgaaaaa attttagaca attttaatga aattgcttta
    26521 atcaactctt tatataattc tttttatcgt ttatttaaaa tcgcacttta tgctaaagtc
    26581 aatggtaaaa ttgactttaa agatctttta ggctatactc cacctcctca agtgggacaa
    26641 aatttaagct ctcaagcctt tagtttaaaa atcgaacaat ataaagaaat tttcactctt
    26701 ttacttaaaa gcgaatacga gcttaaaacc aattctaagc tcgtaaaaaa agaattttta
    26761 atttcaaatt tgcttaaact tgcaaggatt ttgaaaaact aactcactcc atcacaagtc
    26821 gcataaggtg taagtcctca ccttgtgtga ttttatattc tatactttga catttaggac
    26881 acttaaaaac attttcttct aaaatacttg ttttatcgca ttttaagcat aaaatttcaa
    26941 gcggagcaag ttctataaaa agtttagcat ttttacaaat atttgagttt tctttaaaag
    27001 tttcaaaaca acgcttaaaa agatccgctt ctataccgct taaacgcccg atttttacat
    27061 aaatttcttg tacattacaa gccttattgt ttaaggcatt ttcttcacaa agttcgatta
    27121 aagattctac tatacttaat tcgtgcatta acaaattctt ggtaaaagtt cgcctttagg
    27181 gctttctaaa aagcgttttg ccccataagc gttttgtaag atcacgcgtg cttttttctc
    27241 ttctaaaact tctcctataa tactcgcatt tacattgtat ttttttagaa tttccaaggc
    27301 ttttaactca tcttcttttt ccacacaaag tataaaagtg ccttcatttg caagttcata
    27361 agcttcataa ccaaaaagct cgcaaagtcc taaaacctca tcttgaacga tgattttttc
    27421 ttcaaagatc aaaagatcat ttccgctttg ctttgcccac tcatttaaaa ccgcactaag
    27481 ccccccacga gtagcatctc tcattgctac aacctttata tctttttcta aaagctctaa
    27541 aacctcttta tccaaagcct tacaatcact tttaacatca gcttctaact catttctttt
    27601 gattaaaaca ctagctccat gccttcctat atcacctgaa agaagtatgc taagccctgc
    27661 tttgatattt ttactttctt ttttagaaat aatttcacct aaggccgtag tgttgatata
    27721 aatttcatct gctttgccct taggaacaac tttagtatcg ccacaaacta acataactcc
    27781 gcatttttca cattcttctt taatgctttt taaaatgcgt tctagttttt ctagctcaaa
    27841 accttcttct aagataagcc ctaaacttag atattttggc ttagcaccta ccatcaaaac
    27901 atcgttaata gaaccacaaa cacaaagttt tcctatatta acctcttcat ctaaaaaaat
    27961 cggacttaaa acaaaagaat ctgtgcttaa agccaaattt cctaaaatcg ctgcatcatt
    28021 atttgcattt aaaatttcat tatcaaagat cttaaaaagc ttagttaaaa gctcgttcat
    28081 ctcttctccg ccacctccgt gggctaagga aatatttttc atacattcac ctttgagtat
    28141 ttataatacg ccgcacaagc accctcgcca gaaaccatac aacttcctat aggacttctt
    28201 ggcgtacaag ccttaccaaa aactttacaa tcataaggct tggccaaacc tcttaaaatt
    28261 tgcccacaaa tacaggcttt gctttcattt ttactttgca ccgtacaatc aaatttttta
    28321 ctcgcatcat aagcactaaa ttcttctttt agttccaagc ccccatcttt aataagccct
    28381 aagccacgaa attcaaaatc acacacccta aagtattttt ttactaaatt ttgtgcttta
    28441 acattacctt ctttacttac ggctcttttg tattgattat acactttaaa agtgccttca
    28501 ttgctttgtt ttatgatatt taacacactt tctaaaatat caactggctc aaaaccactc
    28561 accgctatag gggttttaaa ctttgctgct aaaggctcat aaataccata acctgtaatc
    28621 acactcacat gagaagggcc taaaaaagca ttgattttta cattttcatc attcatgatc
    28681 gcttctacag gcgctggaac tgtgatatga ttgatatgaa aaaagacatt atttattttt
    28741 tcttctataa ccttttgaag aagtaaagca ctcataggcg tagtagtttc aaaacctata
    28801 gcaaaaaaga tgatattttt gtttaaattt tgcttagcga tttccaaaac ctcaagtgga
    28861 gaataaagcg ctctaacatc agccccttta gctcttaaat caagcagaga aatttcactt
    28921 ccaggcaccc ttaaaagatc tcctaaagta caaaaaatcg tatctttcat ggaggctaac
    28981 ttgatagctg tatcaatgcg aactcttggc ataacacaaa caggacatcc tggcccatgg
    29041 ataaagttaa tttcctttgg caaaatagaa ggtagggcat atttcataat actatgcgta
    29101 tgcccaccgc aaatttccat gatattgata ggatttttaa gttcttgttc tatgagtttt
    29161 tttaaagcta aaatgctttc tttatctcta aattcatcga tgaaattcat ttaaacccaa
    29221 atctccttca tcacttttta tctctccact attcattttt tctactattt cttgataggt
    29281 tttaatgctt tctagtgcag cttctttgtc gattttttcc atagcaacgc ctacatggat
    29341 taacacataa tcgccttgtt ttaaaggctc atcaatcaaa tccaaattaa cttttctttt
    29401 cacacctaaa gtttgcacta aagcattgtt taactcatcg atttctaaaa tttcagaagg
    29461 tatagacaaa cacattaaaa aagctccttt ttaagtttaa gcaccttata ccaaagctcc
    29521 atattggtgc cattttttgc atcaagagtg ataatatctg ctctaggatt taattcttta
    29581 atcaacctag tcgcctcttt aacatcaaaa tcaaaatgat gagccaaatc tgcctttgtg
    29641 attaaaacta tatcagcctt tttaaacatc acagggtatt tttgcggttt atcacttcct
    29701 tcggttactg aaagcaaaac cacatttaaa tgctctccta aatcataact tgcaggacaa
    29761 accaaatttc caacattttc tataaaaagc aaatccacat catcaatgac taaatgatgc
    29821 aaagcctcat gcaccataaa agcatccaaa tgacagcttt gccctgtagt gatttgatac
    29881 gccaaagctc cggcattttt tactcttagg gcgtcattat tggtttctaa atccccttca
    29941 atcacagcaa ttttaagttc atttttcaaa gccttgatcg tgctttctaa aagcgtggtt
    30001 tttccgctac ctggagaact cattaaattg atacaaagcg tgttagcctc attaaaatgc
    30061 gctctattgt gtttagcttc ttcatcgttt ttgcttaaaa ttttagaaat tacttctatg
    30121 gttttacttt cttttaaact tggattttca tggtggtgat cgtgatgatg atcatgcgta
    30181 tggcttgaat ttatagagca gccgcaatct ttacacattt tctttccttt atattttttg
    30241 tttcatttta accttaaaag cattaaaaaa ttatgagttt aaagataaaa tcactctttt
    30301 tttaaaaaat gcaccatttg tcctaaagct atggagctat cattgcaagg gtattttaaa
    30361 ggtataaaaa aatcaaaatt tttagctttt aaaatttcaa gtaaggtttt gttttgaaaa
    30421 actcctccac ttaaaagcac ttttaaatca taatctttgc taaaatctat gataaaattt
    30481 gccaaggcat taaacatacc tgtaattgcc ttagtttttt catcttgtaa agcccctagg
    30541 attaaatttt taaaattaac ctgccctttt tctacaaaaa gcttgtaaga aaaatcaaga
    30601 tttttatcat aaaaagcctc acacattaag ccaacttgag cttcataaga acttttttct
    30661 aagttaaaaa caatacttcc aaaagcatcg ataatgcgtc ctaaagaact cgtttgcaag
    30721 ttagaatgag aataaatttt tttaaggttt tcaagtttga tttttggaat ttttgctaaa
    30781 aactccttag ccttatcttc taaatcataa tgaaaaataa gacttagagc taaattttgt
    30841 atatttttaa tatcactatt tataagagtg aaattttcaa aatgtgcaat tctttcatat
    30901 tcttttaaat ttcctataaa aacttctcca ccccaaattt taccatcttc tccatagcct
    30961 gttccatcac aaataaaagc taaagccttt tcatcttttg aaaaattttc ttcatattca
    31021 aaataaaccg cacaaaaatg cgcataatga tgagaaattt taatcctttc ttcaaattct
    31081 tttgcatagc taaaattcgg gtgtttatcg cacaaaatcg catcaaattt caaatcataa
    31141 ttttgtttaa aaaattctaa aagtttaaaa aatctctcat gcacatcaag acttttcaaa
    31201 tcccctatat aaggagaaat taaaagttta ttttcataaa aaatcacaaa ttcattttta
    31261 agctccgcac ccaaagctaa aaaagtgcct tttttattaa aatttctttc caaataaaaa
    31321 ggatttaaac cccttgaagt acgcaaaaac atagttttac catttaccac ttgaactatg
    31381 ctatcatcac ttgcattgat aatttctcta tcataatcta aataaaaatc aaaaactcca
    31441 tcaagttttt gacacaaatt aaactcatcc ttaatgatac tttctccact taaatttgca
    31501 cttgttgcca caaggcttcc tttaaaatac tcaaaaagca aaagatgtaa aggcgtataa
    31561 gctaacataa taccgatttt atcaacatca ggagcgatta aagaaaaggc tttttttgcc
    31621 tttaaaatca caataggagc taaaacccca ccaagcaaag cttcttcttt ttcatctata
    31681 aaggcaagtt ctttagcact ttgtaaatct ttacacatca aagcaaaggg ttttttaggg
    31741 cgattttttc taagtcttag agtttttaaa gcttcttcat taaaagcatc acacatgaga
    31801 tgaaaaccgc ccatgccttt aatggctaaa attttacctt cctttaaaaa cttcgcactt
    31861 tgtataaaag cttcttgatc tttgactaaa atttcaccct ttggattttt aagaaaaaca
    31921 ttgattttac acttaggaca actaatgggc tgggcatgaa aacgcctatt tttaggatct
    31981 tcgtattcac ttttgcaaaa ctcacacatc aataattctt gcatagaagt atggactcta
    32041 tcataaggaa gactttttat aatactaaag cgtggcccac aatgtgtgca agtgataaaa
    32101 ggatacaaaa agcgtggatt tttttcatca aaaaattctt ttttacactc cttacaaagc
    32161 gcaaaatcac tcaacatagg cgtgcttttt gtattctcta aagaaggagt aatgctaaaa
    32221 ttctcatagt ttgaaataga aatttgcgtg attataagct tatctattct tgctaaaggc
    32281 gggagatgat tttttaaatt ttctatgaaa ttttcacatt ctttttgagt gcaagcaagg
    32341 atgatttcta ccccaaaacc atcatttctt acctctccaa aaagctttga ttttaaagct
    32401 agttcataaa ctaggggacg aaaacccacc ccttgaacta agcctgaaat tttgatctta
    32461 taccctaagt ggtacatcgc ttagctgaca atttttaaga tgttttaaag tatttttaag
    32521 caaagattta tgctcaaaca aagatccact tataagtgct aaatcacttt gctttttctc
    32581 tcttaattca tcataagtat cacgtaagaa ataagccaaa ctctcaaccg ctccataagc
    32641 tatattagca ctatccacac ctgctaacat aaaactcata gcagatctta aagttcttgt
    32701 ataatcaaaa cttttatctt ctttcaaacg ataatcaatc tttactccac gaggcatttt
    32761 tgactcatca gcgattttta aaagctcact agcactctct tgtaaatttt tacccaaatt
    32821 tagcactctt cctattaagc caaacaagga ataaaaattg ttttgaagct caaaattttc
    32881 atctaaaaga ggaaattcct tgctaaaatt ttctaaaagc cttgcaccaa tttcatcttt
    32941 tttaatctct tcataaagct ctttgctgtg ttttggtaag caaagtttaa gcaaattaag
    33001 ctctttgttg ataagcaaaa tatcttcatc atctttactt agttctaaaa taaaagcctt
    33061 ttctttataa cggcttacaa gataagaaat tcttgccata tttttatctt ttttagaaaa
    33121 aataagctct cttgccttgg cattgataaa ttcaaagcct tccaaaacca ccacttgctc
    33181 atctaaagca ctgatataaa aatctttttg atattcttct atctttttta cgcttaaaaa
    33241 tttatattca ttttcaaaaa gttttaaacc taaagcaaaa caaaacaaat ccctagcaag
    33301 tctgatttta aaatcattaa aatcaagatt gtgatttttt ctaaacatag cattaagcct
    33361 tagcttcatc aaaggttttt ccaaacttgc aagaagtttt aaattttcat ttgaacaaac
    33421 aaaaactgaa tttatagcct taatatcaca aggaagcaaa aaatctccta taaattcgtt
    33481 cttaaacaaa gaaaattcat aaataccatt tttatctttt aaataaatct ttttttcttg
    33541 acttaacaaa tcaaaagcaa gatttaaaaa agtattgaaa ttttcttcat tgattttttc
    33601 aaattctgat aaattgcttg aaaattcaca ctcacaaaac acgccccatt cgtttttgtt
    33661 taaaagtttt ttttcttgat acgcattaga atttaaatga gtaatataag aaaatcttga
    33721 aaattcttta tcctctggca tacaagggtt aaaaccatgc cccgctttta catcaaattt
    33781 tttcaaaaaa acgctatgac tcatgaaatt caaagaatcg caaaaagtct ttaaattttc
    33841 ttcatctgca tcgatagaaa aatgataagt attttcttct ttactaagga tataattgta
    33901 atttttcgca taaaaacgca ataaatattc aaaaatatca ttatctgcat tataaataaa
    33961 atcaaaatcc aaagtcatat tatgcctttt ttgaaaaata aactataaat ataacatttt
    34021 taacttaaaa attctttctc tctttgccta aaatcactca taaaatgctc tataaaagta
    34081 taaaattctt tgctatgatt gggaaatttt aaatggctaa tttcatgcaa aatcacatat
    34141 tcaatagctc ttaaactctt ttgaatgagt tttaaattta aattaatata agctttattg
    34201 tgattgcaag aaccccaacg cgttttcata tttttaatgc ttaaatgcgt gtaaaataag
    34261 cctgtttttt tactccattt tttaagataa aaagtaaaaa tctttttagc attttgtctt
    34321 aaaaataaat ctaattttgc tttattttga caaattattt tatctttatc aaaataaatt
    34381 tttttggcat tttcatcaaa aataatttta tattttttag ctaaaaagat taactcatca
    34441 tcttttaaaa cttttttttc aaatcttatt tttgcctcat tcatccaaga acttgattta
    34501 tctaaaaact cataaacact tttaaaggtg caaaaataag gaatactaag aacaaattca
    34561 cccttttcat ttagccttaa tcttaaagtt tttatgcatt ttttagaata aaaatagcac
    34621 tcatctttat aaataaatga ttttaaacta gagctttgcc ttgccatttt ttacttttcc
    34681 atctgtatga atttaccatt ccacgcaaaa actcatctgc acaaaatcct atccaaaccc
    34741 ctaaaattcc aagattaaaa tgaaaacaaa gcacataacc cacaggcaaa gataccccca
    34801 tcataaaaac aagtccgcta aaaaatggaa acttagcatc gccacttgcg cgcaaggaat
    34861 taaccataac tatattaaaa gttcgtgaaa tttcaagaaa gattgaaaga gcaaataaag
    34921 gtatcattaa attttttagc tcttctttaa gccctaaaat ttgcatagta aaatcttgac
    34981 aaagatagtt taaaaacgcc actaaagcac tcgctattac actaaaatat aaagcacgcc
    35041 aagcatgttt ataagcgata ttttcatatc tagcaccgac taatttacct actatgattt
    35101 cattagctat gcttatagct tgtcctataa gcatgataag cattgaaatt tgaaaataaa
    35161 tcgtttgcac actcaaactc gcctcaccta agcttgctac aaaagcaaaa gctatagtgt
    35221 attggactat ccacaaaaga ttttcccctg ctgaaaatcc tcctatattt aaaacctttt
    35281 ttaaaacttc tttttcaagt tttatcattt ctttgatttt aagatgaatt ttaagtttat
    35341 aaaaaagtat cgcaaacaaa gcaactatag caacaatgcg agcaaaaata ttactaagcc
    35401 ctattccaaa aagttctgac tttgtataat gcaaaacata ataatttcca caaatcacca
    35461 ctatatccat caaaaaacct ataaacatga cccaataagc catattataa acccttacaa
    35521 tagcagctaa aacaatacct atggcatcaa aaaacaaaca aattgcaagc atatgtaagt
    35581 aaatttcgct atctttgagc aattcttgtg gaatttttaa aagataaagc aaatactccc
    35641 catgccataa aataagcaca ccgcatacaa agcctaaaag tgcatttaag aacaaacttt
    35701 gatgaatcac ttttcttgct aaaacatgat cttttgcacc aattgcttgt gcgatcacca
    35761 cactacaacc cacacttaaa aatgaaaaaa tagtgataaa aagatctaaa atttgatttc
    35821 cagcgcccat agcaccaaca agaaaattag aataatgcga caccatagcg gtattgatga
    35881 tgatagtaag gtattttgaa agcaaatccc aaaaaatagg aacactgagt tttgttaggg
    35941 aaaattgttt ttttgccatg attattcttt taaaaagccg tattcataaa tttttggctc
    36001 tatttttttg gctaaaattt ttaaatttgc atttaaatca ctcagtaaag ctttataata
    36061 ttcatctttt gctttagcag ggttattcat cttacctttt tcatccctac cttgaaaaaa
    36121 ttctttgata tcataaaacg aagcattgac aagatagcct ttatcctcgc tatgtgtgtg
    36181 ataatactta aaaagttctt ttcctgcttt taagagctct tgagcttcaa gactgaattc
    36241 tatctttact aactcatcac caaaaagcga attttcatct tttatcttgc cctttataaa
    36301 tttatacata aaatcactct caaaagcttc ttttgtgata cctagttctt tttcactaaa
    36361 aggtatgaaa tgatttatcc cttcttttgc acttatgcga ttttgtccat gaaaaagcat
    36421 aaaagctaaa caatcacttt taaactcatc atcattttca tataaatcat taggatataa
    36481 aaactgatcc ctatcattta cccaagtagc acttatagca tgacgcactg agaagaatat
    36541 agaacaagct aataaattgt cataatttaa aaatatagaa tgtccagcat ctcttgtatc
    36601 gtgcataata taaacaagat tttggtgctg aaaatccatt ctaccagtat tcatcattcc
    36661 taaattcaat aatatatttt tgtttttaaa cttagatatc catttaccaa t
//
LOCUS       DAPWGO010000008        31784 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.008, whole genome shotgun sequence.
ACCESSION   DAPWGO010000008 DAPWGO010000000
VERSION     DAPWGO010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 31784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31784
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.008"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(26..634)
                     /locus_tag="RJ336_000352"
     CDS             complement(26..634)
                     /locus_tag="RJ336_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ5212826.1"
                     /translation="MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLA
                     KKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILDEVGMYDYAMLESIRIYSDSISF
                     VLSSHKKLNILKKEHFKSRLSACFELKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
                     QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR"
     gene            complement(627..2039)
                     /gene="mshL"
                     /locus_tag="RJ336_000353"
     CDS             complement(627..2039)
                     /gene="mshL"
                     /locus_tag="RJ336_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus (MSHA type) biogenesis protein MshL"
                     /protein_id="HDZ5212827.1"
                     /translation="MIRLILINILFCHYLYALDCQKRLFDISINEKLSIQESLDELAK
                     YCSFSIIVKDKIAKEKLETLQNSVNIHQMSLDEIFNFFIKEHDLSYDFDGKILRISGI
                     NTKIFKISYITSIREGQSITKASVDAKPRQSEYSGSFDDAEDNMIKSMEKFDFWQNIE
                     KEIIVLLKNSHEDYEAKTPIINPNAGLIIVTGTNSQLKSVKNYLQKLENRLKKQVIID
                     VSILAVSLNESHSSGINWQNFNIGLNSQVNNENSFIQFQNGQGFVKNLGLRANLNFDS
                     IINFLSQNGKTSVLSNPKLMALNNQQAIISVGDTINYQVKESSKGTENGTTVSESYNN
                     YSIFVGILLNILPEISDDGKIMLRINPSLSDFKYPEDNKRQKEPRTIAPDTIQKKLSS
                     VVQVENNQTLILGGLISHDKSNEKNSINFLSKIPILGSLFKGEVLNSKVTEIVFIITP
                     SIVDSVNAPSLKDLGFKHYE"
     gene            complement(2017..2328)
                     /locus_tag="RJ336_000354"
     CDS             complement(2017..2328)
                     /locus_tag="RJ336_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HDZ5212828.1"
                     /translation="MCFSTLFAQDNFEEYFKLIDKENRINFNTLQNPFVNPTFEKLRH
                     IKITAIMLDKVKIYDRWYKKGDMIDDAIIHEINTKEIKFQYDNLEIAIQINKNDKINI
                     N"
     gene            complement(2352..5912)
                     /gene="nifJ"
                     /locus_tag="RJ336_000355"
     CDS             complement(2352..5912)
                     /gene="nifJ"
                     /locus_tag="RJ336_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HDZ5212829.1"
                     /translation="MGKIMKTMDGNEAAAYAAYAFTEVAGIYPITPSSPMADYTDMWA
                     AAGKKNLFGVPVKIVEMQSEAGAAGSVHGSLQAGALTTTYTASQGLLLKIPNMYKIAG
                     QLLPCVIHVAARSLAAQALSIFGDHQDIYAARQIGFAMLCSHSVQETMDLAGVAHLAA
                     IKGRVPFLHFFDGFRTSHEIQKVEVMDYAHFDRLLDREALLEFRNNALNPENPKTRGT
                     AQNDDIYFQTREVSNRFYDALPDVVNEYMQEISKITGREYKPFTYYGHKEPERVIVAM
                     GSVTQALEEVVDYLNAKGEKVGILKVYLYRPFSLKYFFDVMPKSVKKIAVLDRTKEPG
                     SLGEPLYLDVKSAFYGRENAPVIVGGRYGLSSKDVDPAQMIAVFENLKLDNPKDGFTV
                     GIVDDVTHTSLSTGEKISLGDESTIECLFYGLGADGTVGANKNSIKIIGDKTDFYAQA
                     YFAYDSKKSGGYTRSHLRFSKKPIRSTYLVSTPHFIACSVAAYLEIYDVLAGIRKGGT
                     FLLNSIWNAEETIRQLPDAVKKTLAEKEVNFYIINATKLARDIGLGNRTNTIMQSAFF
                     KLAKIIPYEDAQKYMKELAYKSYSKKGDAIVEMNYKAIDVGADGLVKVEVDPNWKNLE
                     LKEKEQTNAYKGTEFVEKIVKPMNAAKGDDLPVSAFLGYEDGSFEHGTTEYEKRGVGV
                     MVPRWIEANCIQCNQCASVCPHAVIRPFLINDEEMANAPRGVKDHALEAKGTKGEKLS
                     FKIQVSPLDCTGCELCVHECPTKEKSLVMVPLQEEMDFGEQENADYLFKEITYKDDIL
                     NKETTKGAQFAQPLFEFHGACPGCGETPYITLITRLFGERMIVANATGCSSIYGGSAP
                     STPYRKSVKNGHGPAWGNSLFEDNAEFGLGMKIATENTRHRIEHIMNESMQEVPNALS
                     ALFKDWIANKDNGAMSVEIKDKMIPILEQNKNIKAVQDILELKQYLSKKSHWIFGGDG
                     WAYDIGYGGLDHVLASGENVNILVLDTEVYSNTGGQSSKSSRTGAVAQFAAAGKPIQK
                     KDLGQIAMTYGYIFVAQVNSTANYTHLIKAITAAEAYDGPSLVICYSPCIAHGIKGGL
                     GYSGEQGELATKCGYWPLYTFDPRLEEQGKNPLTLTGKEPDWDLYEQFLMNEVRYNSL
                     KKANPEHAAELFERNKKDAQRRYRQLKRIAMADYSNEVES"
     gene            complement(6005..6646)
                     /locus_tag="RJ336_000356"
     CDS             complement(6005..6646)
                     /locus_tag="RJ336_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDZ5212830.1"
                     /translation="MNKTILFDLDGTLIDSTDAILNSFQGAFKALGLTSKNNEEIKNL
                     IGYPLEQMFRMLYPDKVNLSKEFVLAYREIYAQIYLEQTTLLPKAKEALELGSEIADL
                     GIVTTKGGKFTPILLDYLGVKKFFKTLITLEDVTNPKPSSEPIILALKRLNKTQENAY
                     MIGDTILDIQAAISANITPLALACGYGNENELKAYSMVFLNAYEAVNYIARLN"
     gene            complement(6646..7605)
                     /gene="cadF"
                     /locus_tag="RJ336_000357"
     CDS             complement(6646..7605)
                     /gene="cadF"
                     /locus_tag="RJ336_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding outer membrane protein CadF"
                     /protein_id="HDZ5212831.1"
                     /translation="MKKIFLCLGLASVLFGADNNVKFEITPTLNYNYFEGNLDMDNRY
                     APGIRLGYHFDDFWLDQLEFGLEHYSDVKYTNTNKTTDITRTYLSAIKGIDVGEKFYF
                     YGLAGGGYEDFSNAAYDNKSGGFGHYGAGVKFRLSDSLALRLETRDQINFNHANHNWV
                     STLGISFGFGGKKEKAVEEVADTRPAPQTKCPVEPREGALLDENGCEKTISLEGHFGF
                     DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANEL
                     EKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVDAKFILR"
     gene            complement(7730..8119)
                     /gene="rpsI"
                     /locus_tag="RJ336_000358"
     CDS             complement(7730..8119)
                     /gene="rpsI"
                     /locus_tag="RJ336_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDZ5212832.1"
                     /translation="MATTYATGKRKTAIAKVWVKPGSGKISVNGVDLNTWLGGHEAIK
                     LKVVQPLLVTKQETSMDIKATTLGGGYSAQAEALRHGISRALAAMDADFRALLKPKGL
                     LTRDSRTVERKKYGRRKARRSPQFSKR"
     gene            complement(8122..8547)
                     /gene="rplM"
                     /locus_tag="RJ336_000359"
     CDS             complement(8122..8547)
                     /gene="rplM"
                     /locus_tag="RJ336_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDZ5212833.1"
                     /translation="MTKITKPNEVKREWIVLDAEGKRFGRLLTEVATILRGKNKPCFT
                     PNVDCGDYVIIINASKAVFTGANKAEDKLYHRHSGYFGSVKSEKFGDLLEKNPAKLYK
                     LAVRGMLPKTNLGRAMLKKLKIYAGSEHPHTAQIAKEGK"
     gene            complement(8631..11396)
                     /locus_tag="RJ336_000360"
     CDS             complement(8631..11396)
                     /locus_tag="RJ336_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecB-like helicase"
                     /protein_id="HDZ5212834.1"
                     /translation="MSQFEPFLALEASAGSGKTFALSVRFVALILKGARINEILALTF
                     TKKAANEMQKRIIETFLNLEKENKTSECNELCKLLGKDKEELISLRDVKKEEFLRTEL
                     KISTFDAFFGKILRVFALNLGLSSDFTMSEERLDVREIFLKLLKKDELKDLAYYINLV
                     DEKENFFNELEKFYENAYFQNLPKIPNPSKAYINKAYSELRSYCLGLTHVKNYKNLCD
                     NFKSEVLDLSVFMQSSFMTKFESTKYLQDLESTNLHFSAKRMELINALNTYAIELENY
                     KIANLMNLLNHYSEAKNIFHKDKNTLNFQDVSKKVYELITSEFKDMIYFRLDGFISHL
                     LIDEFQDTSVIQYQILRPLIAELVSGEGVKKNRTFFYVGDKKQSIYRFRKGKKELFDL
                     LKQEFSQIKSDSLNTNYRSKELLVDFVNETFKEKIKDYKEQFALESKKGGFVRIVESK
                     EQKVKNQAQEIKEKTLETLFEQINFLRSKNISYDDICILCWKNSDADMVLDFLREQKI
                     PAFTQSNVLLENKASVRLVLEYAKYCIFGDEFYLVFLKELLGFEPRKITLDFSKNAME
                     NVLFLIKELKLDLNDIALIQFIEYAKTKENFLKLLFEPCTLKIVSEQNMGISIMSVHK
                     SKGLEFDHVILLDSLSKNNSNNEDIMLEYDINQGWQLHIKDKIRELTKEPIYTLFKEN
                     ITRANYEDDINKLYVAFTRAKESLIIVKRSEESVNGNYPSYFKGGFLNIYSQERGFLE
                     SKEQILSVKKESIQALQKFEKISPQEVQSEEKLDSKELYFGNAFHFFMQNLKLPKGEN
                     FQMLTQRCKSKFRHFLDESDFEKLFKRIEILLKNTQFQNLIGDGKLLKEQALSFNGEI
                     KQLDLLALKDEEAFIIDYKTGLAMQDKHKEQVRTYKIAISEILKKDKVRAFIVYCLEN
                     EIQILEI"
     gene            complement(11393..13759)
                     /locus_tag="RJ336_000361"
     CDS             complement(11393..13759)
                     /locus_tag="RJ336_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HDZ5212835.1"
                     /translation="MKLRIFSSSRQIREYYNQKKQQNALLDSAIHIGEFLDKVCLSNF
                     HKASSYESLLLMQEACLKSKDLEKKLGISVEFFAFLKNNEYLFSFFKELSLEKKSIED
                     LKNNDYYATYNEHLEILDEVYKNYLALLEKNSFYDDLSLPKNYTLNKDFLDEYEAIVY
                     DLQGFLSKFEENLLSEISQIKEVVLSFKTSKFNLEYLLKLDFLKTFDLKINTYYEINL
                     SKQEILKEEIFKTKNSKIKLKSFELRALQCAFVMDEISHFVRKGLKPENIVVITPDES
                     FCEFLRLFDKDNMLNFASGISIKESLFYQKFQALYESASSASFVYKNQEDYFEDTQMI
                     FDYHNTLLHSLKLDFIEFKKYFDEKCDFEYFEKLLALFLENEKQELVYLIRKELYFIK
                     DLLKNQSLTLKELIHLFFMQISQLSLSDVGGGKVTVMGLLESRGLCFDGVILVDFNEE
                     FIPKRSVNELFLNNEVRKKAGLISYDRRENLQRFYYESLMKNALEVSICFVENEEKSK
                     SRFLDELDFDFFYETHIHQKAYLNALKLDYEGIKPNLTPIKAPILKHNPFEFALSFSR
                     FNLLENQKRTYYYRYILNLAEPRVLSEESKAKNQGNFIHKMLEIYYKNYANNDFDIKV
                     FANLLDKEYQKYNISELDLEVFKLKFIQFAKNEKEHFSKGFYVAHTELELNNILKLGT
                     DSIKLKGTIDRIDSSKEGNLIIDYKSGKVPSNSYQLAFYQALYDENANVGFYDLNSMQ
                     ILHQKAKSLDELRERLKDLVLMSKEEIEFENEQDEHCPYKLIYKKELK"
     gene            complement(13756..14277)
                     /locus_tag="RJ336_000362"
     CDS             complement(13756..14277)
                     /locus_tag="RJ336_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HDZ5212836.1"
                     /translation="MLETKKSFWPYGILLSLLAIIIACIVTIFIASHHPVYEDDFYFD
                     SYQNVENNYNQIQKQQVNFDKFFKVNFQNDKITFIGKRKIPSYEVDQNSYVANFKISA
                     LQNINSDDLKVQALLTRPFTKNFDQKLEGQVKNGILSIALPKLDKGRWELKLKFYANQ
                     ETVGFFSYELNAQ"
     gene            complement(14264..14866)
                     /locus_tag="RJ336_000363"
     CDS             complement(14264..14866)
                     /locus_tag="RJ336_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212837.1"
                     /translation="MKKILQDGFFLAIFFFVLLPSRVFALDAVLFNENILSQKVSNEI
                     NLIGKELYQKSNIFIGVMVGDKTEIETLLNKQKELPQSYILLLLSKNSHKVDIVGSKG
                     ALALIDKEAVLSPYPGTGSILPILATNKGDIYNAAILNGYADIVDRVAKSLGLQLEHS
                     IGNANRDTINILRILIYGFICFALLYYAQRRIKRKKNVRN"
     gene            complement(14863..14964)
                     /locus_tag="RJ336_000364"
     CDS             complement(14863..14964)
                     /locus_tag="RJ336_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212838.1"
                     /translation="MSKALEYLIVIGLVVAAAITAWSVLTVNHLHIG"
     gene            complement(14961..15182)
                     /locus_tag="RJ336_000365"
     CDS             complement(14961..15182)
                     /locus_tag="RJ336_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4006 family protein"
                     /protein_id="HDZ5212839.1"
                     /translation="MMENNNRCVFSLSGVTGMLIATVLLLAILVVLTIWGLKAQQEVM
                     QKPYSLKDVQSVKMFGSKEQDHRSIKEAQ"
     gene            complement(15179..16042)
                     /locus_tag="RJ336_000366"
     CDS             complement(15179..16042)
                     /locus_tag="RJ336_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDZ5212840.1"
                     /translation="MQWLNLEDNVNLLSLIGAILIILITLVIVGRMFKQMKEKKGESE
                     LSEHSWDGIGEYKNAVPTGWAVVFFLTIVWAIWYFLWGYPLNSFSSIGQYNEEVATHN
                     TKFEEKFKNLSPEDKIAMGQNIFLVQCSACHGITGDGINGKAQNLNIWGSEEGIINVI
                     KHGSKGMNFPGGEMLGAADLGVAEEDIPAIAAYVAKDLSAIKKTANENLVAKGKEAYA
                     TCAACHGEDGKGQDGMFPDLTKYGSAAFVVDVLHSGKAGFIGTMPSFPTLNDIQKEAV
                     GEYVISLSRGE"
     gene            complement(16042..16305)
                     /locus_tag="RJ336_000367"
     CDS             complement(16042..16305)
                     /locus_tag="RJ336_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase, cbb3-type, CcoQ subunit"
                     /protein_id="HDZ5212841.1"
                     /translation="MEHLSIVFDVIKNLITFDLATVQKHEWEIFQGYGFFALVMFLSI
                     VLYAYWYHLYRTEKKGERNYENYANLALKDDIDDSVLESKRSA"
     gene            complement(16310..16975)
                     /gene="ccoO"
                     /locus_tag="RJ336_000368"
     CDS             complement(16310..16975)
                     /gene="ccoO"
                     /locus_tag="RJ336_000368"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HDZ5212842.1"
                     /translation="MFSWLEKNPFFFAVAVFVVIAYAGIVEVLPNFAENARPIEGKKP
                     YTVLQLAGRAVYIKDSCNACHSQLIRPFKSETDRYGMYSVSGEFAYDRPFLWGSKRTG
                     PDLARVGNYRTADWHENHMWDPTSVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVF
                     NVPYDTENGTKLGSWEDAQAEVKAEAQAIVDQMKNQEVKDAFAKGEIKEIVALIAYLN
                     SLK"
     gene            complement(16988..18454)
                     /gene="ccoN"
                     /locus_tag="RJ336_000369"
     CDS             complement(16988..18454)
                     /gene="ccoN"
                     /locus_tag="RJ336_000369"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HDZ5212843.1"
                     /translation="MHPGNVLNYDYTVARYFMFATILFGIVGMAIGTLIAFQMAYPNL
                     NYLAGEYATFSRLRPLHTSGVIFGFMLSGIWATWYYIGQRVLKVSMAESRFLMAVGKL
                     HFWLYMLTMVLAVISLFMGVTTSKEYAELEWPLDILVVLVWVLWGVSIFGLIGIRREK
                     TLYISLWYYIATFLGIAMLYLFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYG
                     HNAVAFVFTVGIIAQIYYFLPKESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTV
                     PDWMQTMGSVFSVVLILPSWGSAINILLTMKGEWSQLRESPLIKFMILASTFYMFSTL
                     EGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRVFKRELYSKSLM
                     EAQFWIQTTGIVLYFASMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIVPYYWIRAI
                     GGLLYLIGFFMFTYNIYKTIACGRVLDKEPKSASPMAA"
     gene            complement(18580..19260)
                     /locus_tag="RJ336_000370"
     CDS             complement(18580..19260)
                     /locus_tag="RJ336_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDZ5212844.1"
                     /translation="MSQECKELIILVVEDEIKTRESLINVLSERFSKVIGAQNGDEGL
                     KKFKKFKPDLVITDIAMPIMDGLDMAREIKEISDDVPIVVLSAYSEKERLLRSIDIGI
                     DKYLIKPVDIEELFKVLDCLVGEKIEANMLVKISEEYQFNKTKRTLIHNGKEIVLTKK
                     ELAFISLLLKQPGVLVLHEDIKKNVWIGEHVSDTAVRTFIKRVRDKVGEDFIKNVPSL
                     GYKININK"
     gene            complement(19263..20474)
                     /locus_tag="RJ336_000371"
     CDS             complement(19263..20474)
                     /locus_tag="RJ336_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HDZ5212845.1"
                     /translation="MKDFFKDQFFKALEKNTIFSRADVQGNLIFVSDKLCQISGYSKK
                     ELIGKKYSIFKHPDVEECYIEELLKKLSYKKPYQVIFKNIDKLGKTFYLETLLIPILD
                     KNNELIEIVAFSHDVSNSFKLNEELALNHAKLRELSINLENTVKNHQQEFIQLGKKFE
                     KKMQIALEKNEKDIKIVYEEILKSSLEQMISDIAHQWRQPLNELGIAMFQMKQNLKDE
                     KGFAEIYSQSKDMIKNMSETIDVFRTLFNKGVEQCVFIKETLNKALEIAFETIEKNHV
                     NINIVSKSDYEVLAYENGLIRVFLNLILNSIEAFKNKKRKIITITFSKFGKNYLKITI
                     KDNAGGIDKENLDKIFQPYFTTKHPSQGIGVGLYISRQIIESFQGKIKVKNGKDGACF
                     EVFLKLKERVE"
     gene            complement(20471..21130)
                     /locus_tag="RJ336_000372"
     CDS             complement(20471..21130)
                     /locus_tag="RJ336_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDZ5212846.1"
                     /translation="MSIDFLAIISVAFLSSFGHCYSMCGGFNLLFINLNSKSNNLFLL
                     TFIYHLFRIFAYIALGIIFGTFGNILAINAKVQSLSFFILGIFMMILGFALIFRGNML
                     SFIENNVFFDSFIKKIIKKSKNFKGLKSAIFLGFSNGFVPCGLVYFFIANAMSKQNIF
                     KGILVMMIFGISTLPAMLFFSKISQFFSDFLKNLFNYLSYGVIVCYGMNLAYIGFKAF
                     Q"
     gene            complement(21127..22245)
                     /gene="carA"
                     /locus_tag="RJ336_000373"
     CDS             complement(21127..22245)
                     /gene="carA"
                     /locus_tag="RJ336_000373"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDZ5212847.1"
                     /translation="MKAYIYLENDIFLSAKAFGKSGTFFGELVFNTSLTGYQEIISDP
                     SYAGQFIVFSMPEIGIVGTNENDNESKEIFASGVLMRELSSSFSNFRAKESLQDYLEK
                     HGKIGIYELDTRYLVKMIRNNGNLRAVISTEISNKEDLKIALEKSAKIDEVNFVKEVS
                     TKKNYSHKQGVWNASFQKFNDAKRSEKKVAVIDYGVKTNILNELVEVGFEVEVYPYNV
                     KADELITLYKKGEIQGVFLSNGPGEPRILKQEIAEVKKLAEAKIPMLGICLGHQLLSN
                     AFGYATYKMKFGQHGANHPVINLDTKTVEITAQNHNYNVPEELAQVAHITHRNLFGDN
                     VEGVRYKDYPIISVQHHPESSSGPHESKYIFKEFMNLM"
     gene            complement(22245..22796)
                     /locus_tag="RJ336_000374"
     CDS             complement(22245..22796)
                     /locus_tag="RJ336_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF507 family protein"
                     /protein_id="HDZ5212848.1"
                     /translation="MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEK
                     DILNERKLDERVKELLEQQEDEMELMQVDRKNMFWLVKKKLAPEFNVILDSEDRHNHL
                     AHQILEELVENDYINFIVSENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIP
                     GSEEYDLIFEKLYQEELRKKGMF"
     gene            complement(22889..23407)
                     /locus_tag="RJ336_000375"
     CDS             complement(22889..23407)
                     /locus_tag="RJ336_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotE family protein"
                     /protein_id="HDZ5212849.1"
                     /translation="MIKKFILLVFISSVVFGAEQDCEQYFEARKAQIELQTREFDEAR
                     QSLEAYKASFEALQKERLENLEKKEAEVNATLAKIEELKLENARLVEEQQKILNSIND
                     KTQGRVKEIYSQMKDAAIADVLSQMDAEDASKIMLSLESRKISGVLSKMDPKKASELT
                     LLLKNLDNNASN"
     gene            complement(23400..23828)
                     /locus_tag="RJ336_000376"
     CDS             complement(23400..23828)
                     /locus_tag="RJ336_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar FliJ family protein"
                     /protein_id="HDZ5212850.1"
                     /translation="MKSKYNSVVKVRKQQLDKAESNLNQAKQRQLEYEKAYELSRQEC
                     ENLGVLPKSGSIAELRSNLSMAQVGREALARAREKVELSKKEMNHYQFLYQKAHLDYE
                     KMKVLEAEEIKQKQKELAKAEEKFLDEIAISRFFKGEKDD"
     gene            complement(23825..25075)
                     /locus_tag="RJ336_000377"
     CDS             complement(23825..25075)
                     /locus_tag="RJ336_000377"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDZ5212851.1"
                     /translation="MSKADIIVGIQWGDEGKGKVVDKLCENYDFVCRSAGGHNAGHTI
                     WVNGVRYALHLMPSGVLHPRCINIIGNGVVVSPEVLIAEMAQFENLKGRLYISDRAHL
                     NLKHHSLIDIAKEKLKGKNAIGTTGKGIGPSYADKINRTGHRVGELLEPQRLCEALMK
                     DFEANKTFFEMLEIEIPSAEELLADLKRFNEILTPYITDTTRMLWKALDEDKRVLLEG
                     AQGSMLDIDHGTYPYVTSSSTISAGALTGLGLNPKEAGNIIGIVKAYATRVGNGAFPT
                     EDKGEDGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRYTARLNGLDALSLMKLDVLDGF
                     EKIKICRAYEYKGMEIDYIPSDLENVQPIYEEMDGWDKVFGIKDYDLLPENAKKYIAR
                     LEELAGVKVKYISTSPERDDTIIL"
     gene            complement(25103..25200)
                     /locus_tag="RJ336_000378"
     tRNA            complement(25103..25200)
                     /locus_tag="RJ336_000378"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25164..25166),aa:Sec,seq:tca)
     gene            25341..26549
                     /gene="yedE"
                     /locus_tag="RJ336_000379"
     CDS             25341..26549
                     /gene="yedE"
                     /locus_tag="RJ336_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HDZ5212852.1"
                     /translation="MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMT
                     RWGGEFLELLGMNLDGYSYYQKQNLNGTPLTRTDGIMLIGMFIGCLVAALLANKVKFR
                     LPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLG
                     VKICNTSFFKPKAKLERVNKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNG
                     NISTQNKQSLLALALIFGFVFGFVISRGQICFTSCFRDLFLFGRDNAIKGALIGMIIA
                     SLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVFAGGCECGWAYRAFEGQSHFMIV
                     GIANIIGTMILALSYDFLPKAFKEGIKINLLTEFGNLNGFFINLILFILIFAFVVFYK
                     KYFFKNQLKG"
     gene            26553..26780
                     /gene="yedF"
                     /locus_tag="RJ336_000380"
     CDS             26553..26780
                     /gene="yedF"
                     /locus_tag="RJ336_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDZ5212853.1"
                     /translation="MKITYSLNLQGEACPYPAIATLDVLPKLQSGEILEVLCDCPQSI
                     NSIPQDAKNRGFKVLEIDQSGPTLRFLIQKP"
     gene            complement(26796..28265)
                     /gene="putP"
                     /locus_tag="RJ336_000381"
     CDS             complement(26796..28265)
                     /gene="putP"
                     /locus_tag="RJ336_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDZ5212854.1"
                     /translation="MEVVQINTPIAVMFVAYALLMLYIGFYFYKQNKNSEDYFLGGRT
                     MGPVISALSAGASDMSGWLLMGLPGALYVSGFIDSYIAIGLTIGASLNWIFVAKRLRI
                     YTSVIANSLTIPDYFETRFDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFG
                     IRYDYALTTGTIIIVAYTFLGGYKAVCWTDMIQGLLMMMALIIVPLVMLYHLGGFGEA
                     MNIVREIKPQALSMGEGVGVISIISALAWGLGYFGQPHILVRFMSIRSTKDIPMATFI
                     GIAWMAVCLLSACMIGILGIAYVHKFELSLQDPEKIFIVMSQLLFNPWIAGILLSAIL
                     AAIMSTASSQLLVSSSTIAEDFYKKIFREDAPSHVVLNLGKLGVLLVAVIAFLISTDK
                     NSSVLSIVSYAWAGFGASFGSVMLFSLFWSRMTRVGAILGMITGAATVVLWKNFANSG
                     LYEIVPGFLAASVVIIIASLFTNVRSGTKAAYEKMLKEL"
     gene            complement(28283..31771)
                     /locus_tag="RJ336_000382"
     CDS             complement(28283..31771)
                     /locus_tag="RJ336_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HDZ5212855.1"
                     /translation="MIQKALALAEELQGQIEANISNSEKEFHAKMQKLLNNPKNKVML
                     IELLDRSFRCKDKNASFELIEYTLSKYGIADFFSTFEKFLLFSFLNFGKFAPNLSVPF
                     FVKHLREDTKAMVLDANASVLEPHIKKRKEQDKITLNVNLIGEEVLGEAESKYRMQKY
                     EEALKSSYITYISIKITTIFSQINIIDFDYSKEEVVKRLDYLYALALEEEKKQGVSKF
                     INLDMEEFRDLELTVAAFMESVAKFDIKAGIVLQAYIPDSYEYLKKLFSFSKERVLKG
                     MKPIKIRFVKGANMESEETIASQKGWELPTFYKKIDTDSNYNKMLDFILEGDNHKYIN
                     IGIASHNIFEIAYAYTRISEAGALDSFTFEMLEGMSLQCSYELSKMHDLILYAPVCDE
                     AHFNNAIAYLVRRLDENTSEDNFMRYFFNLKVGDENWKAQKELFLKSLEGIKTLDNTT
                     HRKQDRNKESNIISSYESKKFSNESDTDFILAQNRAWAKEIKAKYENLKDYDVYPVIG
                     ELDFKAENLNVLEVKDKIEDRVIGKAYLAGEKEIKQALEVAKNSKFTQKSHDEIYQIL
                     AKSAKLMRERRGDLIGLAALEVGKTFLEIDPEVSEAIDFIEFYPHSLEELKKQNPKVK
                     FTPKGIGVTIAPWNFPIGISVGTIAAPLAAGNVVIYKPSSLSTLTGYMLCKCFWDAGI
                     PKDALIFLPSKGSDISKYLLVDEAIKFSILTGGEDTAYAMLKANPTLLLSAETGGKNA
                     TIVSKFADRDSAIKNIIHSAFSNSGQKCSATSLLVLEEEVYNDEEFKKTLVDAASSMA
                     VGNPFEFKNKLGTLADKPSSKVQKALDELQPYEEWALKPKFLENNPYLMTPGIKYGTK
                     KGDFTHMNELFVPILSVMKAKDLKEAIDIVNSTGYGLTAGFESLDEREWEYFHTHIEA
                     GNIYINKPTTGAIVLRQPFGGVKKSAIGLGRKVGIYNYITQFLEIKQEDFDDHLIEDK
                     FSKKLAQIDLKEAQDFMNDLIKMSQSYAYHYKNEFSVSKDYVNIRGEDNLFSYTKIKN
                     MVLRLCGNESLKDVLGVILGANIANIDLSISYDEQDISMIERIVQSIGAKVLFLKENK
                     ENFIKSIKEYERVRYLAKPDVNDEIYKEAAKLAKIIIREKPLLNGRFELLNYFNEKAL
                     SISFHRYGNLGIRAIS"
BASE COUNT        10667 a         5847 c         3836 g        11434 t
ORIGIN      
        1 gctctttaat tctttcttgc atatcttacc ttaataagcc attctctaaa gcactaagct
       61 ttaaaatata ctcttgactt ttatttttat caaaaaaact atttatctca taaaaacttt
      121 ttaaagtttt atcaatatat cttaaatttc cttgagaaat tttttgtaaa aacttaagac
      181 atttatttga aaaattcatt ccgaatttca atttaatata atcatcaagc tctaaaagac
      241 taatattttt caattcaaaa caagcactta aacgactttt aaaatgctct tttttaagta
      301 tatttaactt tttatgagaa cttaaaacaa aacttataga atcactataa atcctaatgc
      361 tttctagcat tgcataatca tacattccta cttcatcaag aatgattaaa ctctgacctt
      421 gtgaaatcaa aaactcaatt ttttctttta agaaactctg atctttaaaa ttttcattaa
      481 taaaatcaac attatatttt tttgccaatc tttgcaacaa tacactttta ccactaccac
      541 tttttcccca taaaaaaata aaagcttttt ggctttctaa aatttgattg atttgatgaa
      601 aaatttcttc tctaaatgga ataattttac tcataatgct taaatcctag atctttaaga
      661 cttggagcgt ttacactatc tactatactt ggagtgataa taaaaacaat ttcggttact
      721 ttagaattta aaacttctcc tttaaacaaa gaacctagga ttggaatttt tgatagaaaa
      781 ttgatagaat ttttctcatt agatttatcg tgagaaatca atccgcctaa aattaaagtt
      841 tgattattct ctacttgcac aacactagaa agcttttttt gtatggtatc aggagcaata
      901 gttcttggtt ctttttgtcg tttattatct tctggatact taaaatcact taagcttgga
      961 ttaatcctaa gcattatttt tccatcatca gaaatttcag gcaagatatt gagtaaaatg
     1021 cctacaaaaa tagaataatt attataactt tcactaacag tagtcccatt ttcagtgcct
     1081 ttagaacttt ctttaacttg ataatttata gtatcgccta cagaaataat ggcttgttgg
     1141 ttatttaaag ccataagctt tggattagaa agcacgctag tttttccatt ttgagaaagg
     1201 aagttaataa tagaatcaaa atttaaattc gcccttaaac ccaaattctt aacaaaacct
     1261 tgcccatttt gaaactgaat aaaagaattt tcattattta cttgcgaatt taaacctata
     1321 ttaaaatttt gccaattaat cccactagaa tgactttcat ttaaactcac agcaagtatg
     1381 ctaacatcga taataacttg ttttttaaga cgattttcta gtttttgcaa ataatttttc
     1441 acacttttta actgagaatt tgttccagtt actataataa gacctgcatt gggatttata
     1501 atgggagttt tagcctcata atcttcatga gaatttttta ataatacaat aatctctttt
     1561 tctatatttt gccaaaaatc aaatttttcc atacttttaa tcatattgtc ttctgcgtca
     1621 tcaaaactac cgctatattc actttgcctt ggtttagcgt ctacagacgc tttagttatg
     1681 ctttgtcctt ctctgataga agtgatataa cttatcttaa aaatcttcgt attaatgcct
     1741 gaaattctta aaattttacc atcaaaatca tagctaagat catgctcttt gataaaaaaa
     1801 ttaaaaattt cgtctaaact catttgatga atattgacag agttttgcaa tgtttctaat
     1861 ttttctttgg caattttatc tttaacaata atactaaaag aacaatattt tgcaagctca
     1921 tcaagacttt cttgtatgct taatttttca ttaatactga tatcaaaaag acgcttttga
     1981 caatctaaag cataaagata atggcaaaaa agaatgttaa ttaatattaa tcttatcatt
     2041 tttatttatt tggattgcaa tttctaaatt atcatattgg aatttaatct ctttagtatt
     2101 tatttcatgt attatagcat catcaatcat atcacctttt ttataccatc gatcataaat
     2161 ttttacttta tcaagcataa ttgcagtaat tttaatatgt cttaattttt caaaagtagg
     2221 attcacaaat gggttttgaa gagtattaaa atttatgcga ttttctttat ctataagttt
     2281 aaagtactct tcaaaattat cttgtgcaaa caaagtgcta aaacacaatg tagcactaaa
     2341 aatatatttt atcagctttc aacctcattg ctataatcag ccatagcgat acgcttaagc
     2401 tgtctatagc gacgttgagc gtctttttta ttgcgttcaa aaagctcagc agcgtgttca
     2461 ggatttgctt ttttaagtga attataacgc acttcattca tcaaaaattg ctcatataaa
     2521 tcccaatcag gttcttttcc tgttagagtt aaaggatttt ttccttgctc ttctaaacga
     2581 ggatcaaagg tataaagtgg ccaataacca cattttgtag caagctcacc ttgctctcct
     2641 gaataaccaa gcccaccttt aataccatga gctatacaag gagaataaca aatcaccaaa
     2701 gatggtccat cataggcctc agctgcagtg atagctttga taagatgagt ataatttgcc
     2761 gttgaattta cttgtgctac aaaaatataa ccataagtca tagcaatttg acctagatct
     2821 tttttctgta taggtttgcc tgctgctgca aactgtgcta cagctcctgt tctagaagat
     2881 tttgaacttt gaccgcctgt attagaataa acttctgtat caagcactaa aatatttaca
     2941 ttttctccac ttgctaaaac atgatcaagt ccgccatagc ctatatcata agcccaacca
     3001 tcaccaccaa aaatccagtg agatttttta cttaaatact gtttaagctc taatatatct
     3061 tgtacggctt taatattttt attttgctct aaaataggga tcattttatc tttaatttcc
     3121 acagacatag caccattgtc tttatttgca atccaatctt taaaaagggc tgataaagca
     3181 tttggaactt cttgcatact ttcattcatg atatgttcaa tgcggtgtct tgtgttttca
     3241 gttgcaattt tcatacccaa accaaactca gcattgtctt caaaaagtga atttccccaa
     3301 gcaggaccgt gtccattttt cacacttttt ctataaggag ttgatggagc tgaaccccca
     3361 taaatagaac tacaacctgt cgcattagcc acaatcattc tttcaccgaa caatcttgta
     3421 attaaagtaa tataaggagt ttccccacat ccaggacatg ccccatggaa ttcaaataaa
     3481 ggttgggcaa attgtgctcc ttttgtggtt tctttattta aaatatcatc tttataagta
     3541 atttctttaa ataaataatc cgcattttct tgctcaccaa aatccatctc ttcttgaagt
     3601 ggtaccataa ccaaagattt ttctttagta ggacactcat gaacacaaag ctcacagcct
     3661 gtacaatcaa gtggagaaac ttggatttta aagcttaatt tttctccttt ggttccttta
     3721 gcttctaaag catgatcttt tactccacga ggtgcatttg ccatttcttc atcattaatc
     3781 aaaaatggcc tgataacagc atgtggacaa actgaagcgc attgattaca ttgaatacaa
     3841 tttgcctcta tccatcttgg taccataacc ccaacaccgc gtttttcgta ttcggttgtg
     3901 ccgtgttcaa aacttccatc ttcataacct aaaaaagctg aaacaggtaa atcatcaccc
     3961 ttagctgcgt tcataggttt tacgattttt tcaacaaatt cagtgccttt ataggcattg
     4021 gtttgttctt tttctttaag ctctaaattt ttccaatttg gatccacttc aacttttaca
     4081 agtccatcag cccccacatc aatagctttg taattcattt ctacaatagc atcgcctttt
     4141 ttactataag atttatacgc aagctctttc atgtattttt gtgcgtcttc ataaggaatg
     4201 atttttgcaa gtttgaaaaa ggctgattgc ataatggtat ttgtacgatt tcccaaacct
     4261 atatcacgag ctagtttggt tgcattgatg atataaaaat ttacttcttt ttcagctaaa
     4321 gttttcttta ctgcatctgg aagttgtctt atggtttctt cagcattcca aatactattt
     4381 aaaaggaaag ttcctccttt gcgaattcct gctaaaacat cataaatttc caaataagcc
     4441 gctaccgaac aagcgataaa atgcggagtt gaaacaagat aagttgaacg gataggtttt
     4501 ttagaaaatc ttaaatggct tcttgtataa ccccctgatt ttttagaatc ataagcaaaa
     4561 taagcttgag cgtaaaaatc cgttttatcc ccgatgattt taatcgagtt tttatttgca
     4621 cccacagttc catcagcacc aagtccgtaa aataaacatt cgatcgtact ttcatctcca
     4681 agtgaaattt tctctccagt actcagtgaa gtatgagtta catcatcaac tatacctaca
     4741 gtaaagccat cttttggatt atcaagttta agattttcaa atactgctat catttgagca
     4801 ggatcaacat cctttgaaga aagtccgtat cttccaccta ctataacagg agcattttct
     4861 cttccataga aagctgattt tacatcaaga taaagtggtt ccccaagact tcctggttct
     4921 ttggttctat ctaaaactgc aatttttttc actgattttg gcataacatc aaagaaatat
     4981 tttaaactaa atgggcgata aagataaact tttaaaatcc ctactttttc acccttagca
     5041 ttaagatagt ccactacctc ttcaagtgct tgagttacag aacccatagc aacaatcaca
     5101 cgctctggct ctttgtgacc ataataagta aatggcttgt attctctacc tgtaattttt
     5161 gaaatttctt gcatatattc attaacaaca tcaggcaaag catcataaaa acgattgctt
     5221 acttctctag tttgaaaata aatatcatca ttttgtgccg ttccgcgtgt ttttggattt
     5281 tctggattta aagcattatt tctaaattca agcaaagctt ctctatctaa taatctatca
     5341 aaatgcgcat aatccatcac ttcaactttt tgaatttcat ggcttgttct aaaaccatca
     5401 aaaaaatgta aaaatggcac tcttccctta atcgcagcta aatgtgctac accagctaag
     5461 tccatggttt cttgcacaga atgcgaacaa agcatagcaa aaccaatttg tcttgctgca
     5521 taaatatctt gatgatcacc aaagatagac aaagcttgag cagccaaaga acgcgctgct
     5581 acgtggatta cacaggggag taattgacct gctattttat acatatttgg aattttaagg
     5641 agtaatcctt gagaagctgt ataagttgtc gtcaaagccc cagcttgtaa agatccatgc
     5701 acactacctg cagctcctgc ttcactttgc atttctacga tttttacagg aactccaaaa
     5761 agattttttt tgcctgcagc tgcccacata tcggtgtaat cagccatagg agaactaggt
     5821 gtaataggat aaattccagc aacttcagta aaagcatacg cagcgtatgc agcagcctca
     5881 tttccgtcca tagttttcat aattttaccc attgagacct tcctttatat tgataatttt
     5941 tataattttt tagctatcaa tttactataa attctcttaa aaggcgttta acgaaaactt
     6001 gaaattagtt taatctagct atataattaa cagcctcata tgcatttaaa aataccatag
     6061 aataggcttt taattcattt tcattgccat agccacaagc taaggccaaa ggagtgatat
     6121 tagcagaaat tgcagcttga atatctagta ttgtatcgcc tatcatatag gcattttctt
     6181 gagttttatt gagtcttttt aaggctaaaa ttataggttc ggaacttggc tttggatttg
     6241 tgacatcttc aagagtaatt aaagttttaa agaatttttt aactcccaaa taatcaagta
     6301 aaatcggagt aaatttacct ccttttgttg taactatacc aagatctgca atttcgcttc
     6361 caagttctaa tgcttctttt gctttaggca aaagagtagt ttgttctaaa taaatttgtg
     6421 cataaatttc acgataagct aatacaaatt ctttacttaa atttacttta tctggataaa
     6481 gcattctaaa catttgctct aaaggataac ctatgagatt tttgatttct tcattatttt
     6541 tagaagttaa tccaagggct ttaaaagctc cttggaaaga atttaaaata gcatcagtag
     6601 aatcaattaa agtgccatct aaatcaaata aaatagtttt attcattatc ttaaaataaa
     6661 tttagcatcc actcttctat tatccgctct accttcttta gtgtcattgc ttgagcgagg
     6721 attatcttga ccataaccta ctgttttgat gcgacttttt tctacaccat atttttcaag
     6781 ttcattagca acacttttag cacgtctttc agaaagcttt tgattataag ctcttgaacc
     6841 gatattatct gtatgtcctt caagaatagt atcatatctt tcattttcat ctaaaacttt
     6901 tgcaatttct ttgatttttt cttgaaaagt tggatttata gtagttttat caaaaccaaa
     6961 atgaccttcc aaagaaatag ttttttcgca accattttca tctaacaaag caccttctct
     7021 tggctctaca ggacattttg tttgtggagc tggacgagta tcagcaactt cttctacagc
     7081 tttttccttt ttgccaccaa aaccaaaact aatacctaaa gttgaaaccc aattatggtt
     7141 tgcatgatta aaattaattt gatctctagt ttcaagtctt aaagccaaag aatcactaag
     7201 acggaatttt acacccgcgc cataatgtcc aaatccaccg cttttattat cataagcagc
     7261 atttgaaaaa tcttcatatc ctccacctgc taaaccatag aaataaaatt tctcacccac
     7321 atcaatacct ttaatagcac tcaaataagt tcttgtaata tctgtagttt tatttgtatt
     7381 tgtatattta acatcagaat aatgctctaa cccaaattct aattgatcaa gccaaaaatc
     7441 gtcaaaatga taaccaagtc taatccctgg tgcataacga ttatccatat ctaaattacc
     7501 ttcaaagtaa ttatagttta aagttggagt gatttcaaat tttacattgt tatcagcacc
     7561 gaataaaaca cttgccaaac ctaaacataa gaatattttt ttcatagaaa aaacctttca
     7621 ttgtgttata aaataaaaat ttaaattttg caattatatc ataaatgaca gaaaaaagga
     7681 tgagttttat aaaaaattgt agaaaggtgg gaaaatccca ccaaaaatat taacgtttag
     7741 agaattgcgg acttcttctt gctttgcggc gtccatattt tttacgctca acagttctac
     7801 tatctctagt aagaagtcct ttaggtttta ataaggctct aaaatcagca tccatagctg
     7861 ctaaagctct tgaaattcca tgccttaaag cttcagcttg agcactatag cccccgccta
     7921 aagtagttgc tttaatatcc attgaagttt cttgtttagt cacaagtaaa ggttgaacca
     7981 ctttaagctt aatcgcctcg tgtccaccaa gccaagtgtt taaatcaaca ccattaacac
     8041 taattttacc actacctggt tttacccata cctttgcgat agcagttttt ctcttacctg
     8101 ttgcgtatgt tgttgccatg attattttcc ttctttagca atttgcgcag tgtgtgggtg
     8161 ctcactaccc gcatagattt ttaatttttt aagcatagct ctgcccaaat ttgttttagg
     8221 aagcatacct ctaactgcta atttatataa ttttgcagga tttttttcaa gtaaatcacc
     8281 aaatttttcg ctttttacac ttccaaaata tcctgaatgt ctatgataaa gcttatcttc
     8341 tgctttatta gcacctgtaa atacagcttt tgaagcattg atgataatta cataatcacc
     8401 acaatcaaca tttggagtaa agcaaggctt gtttttacct ctcaaaattg ttgctacttc
     8461 agttaaaaga cgaccaaagc gtttgccttc tgcgtctaaa acaatccatt ctcgttttac
     8521 ttcgtttggc tttgttatct ttgtcataat ttttaccttt gccaaaaatt taaaatgtga
     8581 ttgtataaaa aataatatta atttttactt aatttaagta aaaataaagt ttatatttcc
     8641 aaaatttgaa tttcattttc caaacaataa actataaaag cacgcacttt atcttttttc
     8701 aaaatttcac taatggcgat cttataagtt cttacttgct ctttatgttt atcttgcata
     8761 gcaagacctg ttttataatc aattatgaaa gcttcttcat cttttaaggc aagcaagtct
     8821 aattgtttaa tttctccatt aaaactcaaa gcttgttctt ttaaaagctt tccatcacca
     8881 atcaaatttt gaaattgagt atttttaagt aaaatttcaa ttcttttaaa aagcttttca
     8941 aaatcactct catccaaaaa atgtctaaat ttgctcttgc atctttgagt aagcatttga
     9001 aaattttcac ccttaggaag ttttaaattt tgcataaaaa agtgaaaagc atttccaaaa
     9061 tatagctctt tactatcaag cttttcttca ctttgaactt cttgtgggct aattttttca
     9121 aatttttgta aagcttgaat actttctttt ttaacactta aaatttgctc tttgctttct
     9181 aaaaaacctc tctcttgaga atatatattt aaaaatcccc ccttaaaata acttggataa
     9241 tttccattta cactttcttc gcttcttttt acgattatca aactttcctt agctcttgta
     9301 aaagccacat aaagtttatt gatatcatct tcataatttg ctcttgtaat attttcttta
     9361 aaaagggtat aaataggctc tttagtaagc tctcgaattt tatccttaat atggagttgc
     9421 caaccttgat tgatatcata ttcaagcatg atatcttcat tgtttgaatt gtttttagat
     9481 aaactatcaa gcaaaatcac atgatcaaat tccaaaccct tagatttatg cacactcata
     9541 atactaattc ccatattttg ttcgcttact attttcaaag tacaaggctc aaataaaagc
     9601 tttaaaaaat tctccttagt tttagcatat tcgataaatt gtattaaagc gatatcattt
     9661 aaatcaagtt ttaattcctt tattaaaaaa agtacatttt ccatagcatt ttttgaaaaa
     9721 tcaagggtga tttttctcgg ctcaaaacct aaaagttctt ttaaaaatac caagtaaaac
     9781 tcatcaccaa aaatacaata tttagcatat tctaaaacaa gccttacgct tgctttattt
     9841 tcaagtaaaa cattactttg agtaaatgca ggaatttttt gctctcttaa aaaatccaaa
     9901 accatatctg catcgctatt tttccaacac aaaatacaaa tatcatcata agaaatattt
     9961 ttagatctta aaaaattaat ttgctcaaat aaagtttcta aagtcttttc cttgatttct
    10021 tgggcttggt ttttaacctt ttgttcttta gattccacaa tacgcacaaa accgcctttt
    10081 ttactttcta aggcaaattg ctctttataa tctttgattt tttctttaaa agtttcatta
    10141 acaaaatcaa ccaaaagctc tttagaacga taattagtat ttaaactatc acttttaatt
    10201 tgactaaatt cttgttttaa caaatcaaat aattcttttt ttcctttacg aaagcgataa
    10261 atactttgtt ttttatctcc tacataaaaa aaagtgcgat ttttcttaac cccttctcct
    10321 gaaacaagct cagcgatcaa agggcgtaaa atttgatatt ggatcacgct tgtatcttga
    10381 aattcatcaa taagcaaatg cgaaataaaa ccatctaaac gaaaataaat catatcctta
    10441 aattcactgg ttattaactc ataaactttt ttactcacat cttggaaatt taaggtattt
    10501 ttatctttat gaaatatatt tttagcttca ctataatgat ttaaaagatt cattaaatta
    10561 gcaattttat aattttcaag ctctatggca taggtattta aagcatttat aagctccatt
    10621 ctttttgcac taaaatgcaa gttagtactt tctaaatctt gtaaatattt tgtactttca
    10681 aattttgtca taaaacttga ttgcataaac acggataaat ctaaaacttc acttttgaaa
    10741 ttgtcacaca aatttttata attttttaca tgagtaagac ccaaacaata acttcttaac
    10801 tcactatagg ctttattgat ataagcttta gatggatttg gaattttagg aagattttga
    10861 aaataagcat tctcataaaa tttttcaagc tcgttaaaaa aattttcttt ctcatcaact
    10921 aaattaatat aataagccaa atcttttaat tcatcttttt taagaagttt taaaaaaatc
    10981 tctcttacat caagtctctc ttcactcatt gtaaaatcac tacttaagcc caaatttaaa
    11041 gcaaaaacac gcaaaatttt tccgaaaaaa gcatcaaaag tactgatttt taactctgtt
    11101 cttaaaaatt cttctttttt aacatctctt aaagaaataa gctcttcttt atctttacct
    11161 aaaagcttgc aaagttcatt gcattcactg gttttatttt ctttttctaa atttaaaaaa
    11221 gtctcaataa ttcttttttg catttcatta gcagcttttt tagtaaaagt taaagctaaa
    11281 atttcattaa tcctagctcc ttttaaaata agtgctacaa aacgcacact caaggcaaag
    11341 gtttttccgc ttcccgcact cgcttctaat gccaaaaaag gctcaaattg actcatttta
    11401 attccttttt ataaatgagt ttataaggac aatgctcatc ttgttcattt tcaaactcta
    11461 tttcttcctt gctcataaga accaaatctt taagtctttc tcttagctca tctaaacttt
    11521 tagctttttg atgcaatatt tgcatactat ttaaatcata aaaacccacg tttgcatttt
    11581 catcatataa ggcttggtaa aaagcaagtt gataagaatt acttggtact tttccacttt
    11641 tataatcaat gatcaaattg ccttcttttg aactatcgat acgatctata gtgcccttaa
    11701 gttttatact atctgttccg agctttaaaa tattatttaa ctcaagctct gtatgtgcaa
    11761 cataaaagcc ttttgaaaaa tgctcttttt catttttagc aaattgtata aattttaatt
    11821 taaatacttc aagatcaagt tcgctaatat tgtatttttg atattcttta tccaataaat
    11881 ttgcaaaaac ttttatatca aaatcattat ttgcataatt tttataataa atttcaagca
    11941 ttttatggat gaaatttcct tgatttttcg ctttgctttc ctcgcttaaa accctaggtt
    12001 ctgctaaatt taaaatataa cgataataat aagttctttt ttgattttcc aataaattaa
    12061 aacgactaaa agaaagcgca aactcgaaag gattatgctt taaaatagga gcttttatag
    12121 gagttagatt aggttttatg ccttcatagt ctaattttaa agcattaaga taagcttttt
    12181 gatggatatg agtttcataa aaaaagtcaa aatcaagttc atctaaaaaa cgtgatttgc
    12241 ttttttcttc attttccaca aagcaaatac ttacttctaa agcattcttc atcaagcttt
    12301 cataataaaa tctttgtaaa ttttctcttc tatcatagct aatcaatcct gcttttttac
    12361 gcacttcatt gtttaaaaaa agttcattaa cacttctttt aggaataaat tcttcattaa
    12421 aatcaaccaa aattacccca tcaaaacaaa gcccacgact ttctaaaagt cccattaccg
    12481 taaccttacc tccgcctaca tcactaaggg aaagttgtga aatttgcatg aaaaaaagat
    12541 ggatcaactc tttaagagtt aaagactgat ttttcaataa atctttaata aaataaagtt
    12601 cttttcgtat caaataaaca agctcttgct tttcattttc taaaaataaa gcaagtaatt
    12661 tttcaaaata ttcaaaatca catttctcat caaaatactt tttaaactct ataaaatcaa
    12721 gctttaaaga atgtaaaagc gtattgtgat aatcaaaaat catctgcgta tcttcaaaat
    12781 aatcctcttg atttttataa acaaaagaag cactactagc actttcataa agtgcttgaa
    12841 atttttgata aaataaactt tctttaatac taatcccact tgcaaaatta agcatattgt
    12901 ctttatcaaa aagccttaaa aactcacaaa aactttcatc tggagttata actacaatat
    12961 tttcaggctt taaacctttg cgtacaaaat gtgaaatttc atccataaca aaggcgcatt
    13021 gtaaagccct taattcaaaa gatttgagtt taatttttga attttttgtt ttaaaaattt
    13081 cttcttttaa aatctcttgt tttgaaagat tgatttcata ataagtgttt atttttaaat
    13141 caaatgtttt taaaaaatca agttttaaaa gatattcaag attaaattta cttgttttaa
    13201 aacttaaaac cacttcttta atctgagaaa tttcacttaa taaattttct tcaaatttac
    13261 tcaaaaaacc ttgcaaatca taaactatag cttcatactc atctaaaaaa tctttattaa
    13321 gagtgtaatt tttaggtaaa gaaagatcat cataaaaaga atttttttca agcaaagcaa
    13381 gataattctt atatacctca tctaaaattt ccaaatgttc attataggta gcataataat
    13441 cattgttttt aagatcttct atgctttttt tttctaaact aagttcttta aaaaaagaaa
    13501 aaagatattc gttatttttc aaaaaagcaa aaaattctac cgaaattcct agtttttttt
    13561 ctaaatcctt actttttaga caagcttctt gcattaaaag caaactttca taagaacttg
    13621 ccttatgaaa attgctcaaa caaactttat ctaaaaattc acctatatga atagcactat
    13681 ctaataaagc attttgctgt tttttttggt tataatactc tctaatttgt cttgaagaac
    13741 taaaaattct taatttcatt gagcatttaa ttcgtagcta aaaaaaccca ctgtttcttg
    13801 atttgcataa aactttagct taagctccca tctaccttta tctagtttag gtaaagcgat
    13861 acttaaaatt ccatttttaa cttgtccttc taacttttga tcaaaatttt tagtgaatgg
    13921 tcttgtaaga agagcttgaa cttttaaatc atcagaattt atattttgta atgcagaaat
    13981 tttaaaattt gcaacatagg aattttgatc cacttcataa ctaggaattt ttcttttacc
    14041 aataaaagtg attttatcat tttgaaaatt tactttaaaa aatttatcaa aatttacttg
    14101 ttgtttttgt atttgattgt aattattttc aacattttga taagagtcaa aataaaaatc
    14161 atcctcatac acaggatggt gacttgctat aaaaatcgtt acaatacaag caataattat
    14221 agccaaaagt gaaagcaaaa taccataagg ccaaaaactt tttttagttt ctaacatttt
    14281 ttttcctctt tattcttctt tgtgcatagt ataacaatgc aaagcaaata aatccataga
    14341 taagtattct taagatattg atagtatcac gatttgcatt gcctatagaa tgttctaatt
    14401 gtaatcccaa ggattttgcc acacgatcta caatatctgc ataaccatta agtatagcag
    14461 cattataaat atcaccttta tttgtagcta atatcggcaa aatagatcct gttccaggat
    14521 aaggactaag tacagcttct ttatcaatca aagctaaagc accttttgag cccactatat
    14581 caactttgtg agaatttttt gacaaaagaa gcaatatata agattgagga agttcttttt
    14641 gtttatttag caaagtttca atttcagttt tatcaccaac cataacaccg ataaaaatat
    14701 tacttttttg gtaaagctct tttcctataa gattaatctc attacttact ttttgactta
    14761 aaatattttc attaaaaagt acagcatcaa gagcaaaaac cctagaaggc aataaaacaa
    14821 agaagaagat ggctaaaaaa aaaccatctt gtaatatttt tttcatccta tatgaagatg
    14881 atttacggtc aaaaccgacc aagcggtgat tgcagcagca acaactaaac caataacaat
    14941 taaatattcc aaagccttac tcattgtgct tcctttatac ttctatgatc ttgttctttt
    15001 gaaccaaaca tctttacact ttgtacatct ttaagactat atggcttttg catcacttct
    15061 tgctgagctt taagacccca aatagttaaa actactaaga tagcaagtaa caaaaccgta
    15121 gcaattaaca tacctgtaac acctgaaaga gaaaacacgc atctattatt attttccatc
    15181 attcacccct tgaaagagaa attacatact cgccaacagc ttctttttga atatcattaa
    15241 gtgttggaaa actcggcatt gttcctataa aaccagcctt accactatgt aaaacatcta
    15301 ctacaaaagc tgcagaaccg tattttgtaa gatctgggaa cattccatct tgaccttttc
    15361 catcttctcc atggcatgct gcacaagttg cataagcttc tttacctttt gctactaaat
    15421 tttcatttgc agttttctta atagctgaaa gatcttttgc tacataagca gcaatagcag
    15481 ggatatcttc ttctgccacg cctaaatcag cagcaccaag catttctcca cctggaaaat
    15541 tcataccttt tgaaccatgt ttaattacat tgattatacc ttcttcgcta ccccaaatat
    15601 ttaaattttg agctttacca ttgataccat cgcctgtaat tccatgacaa gctgaacact
    15661 gaactaaaaa gatattttga cccattgcta ttttatcttc aggagataaa tttttaaatt
    15721 tttcttcgaa ttttgtatta tgagttgcta cttcttcatt gtattgacct atacttgaaa
    15781 aagaatttaa aggatatccc catagaaaat accaaatagc ccaaacaata gtcaggaaaa
    15841 ataccacagc ccaaccagta ggaacagcat ttttatactc tcctattcca tcccaactat
    15901 gttcactaag ctctgactcg cctttttttt ctttcatttg cttaaacatt ctacccacaa
    15961 taactagtgt gattaaaatg ataagaatag ctccaattaa agataagaga ttaacattat
    16021 cttctaaatt taaccattgc attaagcact ccttttactt tctaatacac tatcatcaat
    16081 atcatctttt aaggcaaggt ttgcataatt ttcataattt ctctcgcctt ttttttctgt
    16141 tctatataaa tgataccaat acgcatataa tactattgac aaaaacatca cgagtgcaaa
    16201 aaaaccataa ccttggaaaa tctcccactc atgtttttga actgttgcta aatcaaatgt
    16261 gattaaattt ttaatcacat caaaaactat tgataaatgt tccatcatct tactttaagc
    16321 tatttaaata agcgatcaaa gcaactattt ctttgatttc acctttagca aaagcatctt
    16381 ttacttcttg atttttcatt tgatcaacta tagcctgagc ttcagctttt acttcagctt
    16441 gcgcatcctc ccaagaacca agttttgttc cattttctgt atcataagga acattgaaaa
    16501 cttttttcac agttaaagcc tcagcataag cagtttcaat atctgcatta tttttaaaca
    16561 tatgcttata tgaaggcata atagaatctg gaacaacaga agtaggatcc cacatatgat
    16621 tttcatgcca atcagccgtt ctataatttc ctacacgagc aagatcaggt cctgttcttt
    16681 ttgaacccca aagaaaaggt ctatcataag caaattcacc acttacagaa tacataccat
    16741 aacgatctgt ttctgattta aatggacgaa taagctgtga atgacaagca ttacaactat
    16801 ctttaatata tactgcacgc cctgcaagtt gtaaaactgt ataaggtttt ttaccttcaa
    16861 ttggtcttgc attttctgca aaatttggca aaacttcaac tatgcctgca taagcaatca
    16921 ctacaaaaac agctacagca aaaaagaatg gatttttttc taaccaacta aacatatttt
    16981 ctccttttta tgctgccata ggcgaagcgc tttttggttc tttatcaagc actcttccac
    17041 aagcaattgt tttgtaaata ttataagtaa acataaagaa accgataaga tacaacaatc
    17101 caccaatcgc tctaatccaa taataaggaa caatagccac aacagtatca ataaagctat
    17161 aaagcaagtt accatactca tctgtcgctc tccacatcat accttgagta atacccgcaa
    17221 tccacattga agcaaaataa agaactatac ctgtggtttg aatccaaaat tgagcttcca
    17281 ttaaagattt gctataaagc tctcttttga aaactctagg ggtcatatga taaagcgcag
    17341 ccatagtcat aaatcctacc caacctaatg ttccatcatg aacatgtcct ggaatccaat
    17401 ctgtaaagtg tgctaaagca ttaacagatt taattgaaag aattggccct tcaagtgttg
    17461 agaacatata gaaagttgat gccaaaatca taaatttaat caatggactc tcgcgaagct
    17521 gactccactc acctttcata gtaagcaata tattaatcgc tgaaccccaa gaaggtaaaa
    17581 tcaatactac agagaaaacc gaacccatag tttgcatcca atcaggtaca gttgaataaa
    17641 tcaaatggtg accacctgcc caaagataaa caaacattaa gccccaaaat gcaaataaag
    17701 agagtttata agagaaaatc ggctgaccac tttcttttgg caagaagtaa taaatttgag
    17761 caataatacc cacagtaaat acaaatgcca cagcattatg tccataccac cattgtacta
    17821 aagcatcatt tgttcctgca tacattgata cactatgcca ccatttaccc attccagtaa
    17881 caaaataagt tggtacttcc atgttgttaa aaagataaag catagctata cctaaaaatg
    17941 tagctatata ataccataga gaaatataaa gagttttttc acggcgaatt ccaataagtc
    18001 caaaaatact tacaccccat aaaacccaaa caagaacaac aagaatgtct aaaggccact
    18061 caagctctgc atattcttta gatgtagtca cacccataaa caaagatata acagctaaaa
    18121 ccatagtaag catataaagc caaaaatgaa gcttaccaac agccattaaa aatcttgact
    18181 cagccatact cactttaaga acacgctgac ctatataata ccaagttgcc caaatccctg
    18241 aaagcataaa accaaaaatc acacctgaag tatgaagtgg tctaagtctt gaaaaagtgg
    18301 catattctcc tgctaaataa tttaaattag gatatgccat ttgaaaagct ataagagttc
    18361 ctatagccat accaacaatg ccgaacaata tggtcgcaaa cataaaatat cttgcaaccg
    18421 tatagtcgta atttaataca ttacctggat gcatcgactt tctccttaaa atttttgata
    18481 acaagagaat attatagaat attaattata cattttttct taaaaatgat aattttgtta
    18541 atcatttgtt atgctttata ttttaaggct aaatcagtct tatttattga tatttatctt
    18601 ataacctaaa cttggcacat tttttataaa atcttcaccc actttatctc ttactctttt
    18661 tataaatgtt cgaacagcag tatcgctcac atgctcacct atccaaacat ttttcttaat
    18721 atcttcatgc aaaaccaaaa ccccaggttg ttttaaaagc aaagaaataa aagccaattc
    18781 ttttttagtt aaaacaatct ctttaccatt atgaatcaaa gttcgtttag ttttgttaaa
    18841 ttgatattct tcggaaattt ttacaagcat gtttgcttca attttttcac ctactaaaca
    18901 atctaagact ttgaataatt cttctatatc aacaggttta attaaatatt tatctatacc
    18961 gatatcaatg gaacgcaaaa gtctctcttt ctctgaatac gcactaagaa caacaattgg
    19021 gacatcatct gaaatttctt taatctctct tgccatatcc aatccatcca taataggcat
    19081 agcaatatct gtgataacta aatccggttt aaatttttta aattttttaa gcccttcatc
    19141 tccattttga gctccgatta ctttactaaa gcgttcgctt aatacattaa tcaatgattc
    19201 tctagtctta atttcatctt caactactaa tattatcaat tctttacatt cttgtgacat
    19261 ttttactcta ccctctcttt tagctttaaa aatacttcaa aacaagcccc atcttttcca
    19321 ttcttaactt ttatttttcc ttggaaactt tcgataattt gtctacttat ataaagtcct
    19381 actcctatac cctgactagg atgttttgtt gtaaaataag gttgaaaaat tttatctaag
    19441 ttttctttat caatcccacc agcattatct tttattgtaa ttttcagata attttttcca
    19501 aattttgaaa aagttattgt tatgattttt ctttttttgt ttttaaatgc ttctattgaa
    19561 tttaaaatca agttaagaaa aactcttatt aaaccattct catatgccaa aacttcataa
    19621 tcacttttcg aaacaatatt gatatttaca tgattttttt ctatagtttc aaaagcaatt
    19681 tctaaggctt tatttaaagt ctcttttata aatacacact gttctacccc cttattaaac
    19741 aaagttctaa acacatcaat tgtttctgac atatttttaa tcatatcttt tgattgtgaa
    19801 taaatctcag caaatccttt ttcatcttta agattttgtt tcatttgaaa catagcaata
    19861 ccaagctcat ttaacggttg cctccattga tgagctatat cactaatcat ttgctctaat
    19921 gaagatttca aaatctcttc atagactatt ttaatatctt tttcattttt ttccaaggca
    19981 atttgcattt ttttctcaaa ttttttacct aactgtataa attcctgttg gtgattttta
    20041 actgtatttt caagattaat acttaattct cttaatttag cgtgatttag agcaagctct
    20101 tcattaagct taaaagaatt actaacatca tgagagaatg ctactatttc tattaattca
    20161 ttatttttat ccaatatggg gattaataaa gtttcaagat agaaagtttt gcctaattta
    20221 tcaatatttt taaaaataac ttgataaggt tttttatatg aaagtttttt taaaagttct
    20281 tcaatataac attcctcaac atctggatgt ttaaatattg aatatttttt tcctataagc
    20341 tcttttttac tatatccact tatttgacaa agcttatcac tgacaaaaat taaatttcct
    20401 tgaacatcag ctcttgaaaa aattgtattt ttttcaagag ctttaaaaaa ctgatcttta
    20461 aaaaaatctt tcattgaaaa gccttaaaac ctatataggc aagattcata ccgtaacaaa
    20521 caataacgcc atacgataaa taattaaaca aatttttcaa aaaatcacta aaaaactgtg
    20581 aaattttaga aaaaaataac atcgcaggta aagttgatat cccaaaaatc atcattacca
    20641 aaataccttt aaaaatattt tgcttactca ttgcattggc tataaaaaaa tacaccaatc
    20701 cacaaggaac aaaaccattt gaaaatccta aaaatatggc tgattttaat cctttaaaat
    20761 ttttagattt tttaataatt ttctttataa aactatcaaa aaaaacatta ttttcaataa
    20821 aagataacat attgcctcta aaaataagag caaaacccaa aatcatcata aatataccaa
    20881 gaataaaaaa tgacaaactt tgaaccttag cattgattgc taagatattc ccaaaagttc
    20941 caaaaattat ccctaaagca atataagcaa aaattctaaa caaatgataa ataaaagtta
    21001 ataaaaataa attattgctt tttgaattca aatttataaa aagtaaatta aaaccaccac
    21061 acatagaata gcagtgtcca aaactagata aaaaagcaac gctgataata gctaaaaaat
    21121 ctatactcac atcaaattca taaattcttt aaaaatatac ttgctttcat gagggcctga
    21181 agaactttct gggtgatgtt gcactgaaat aataggatag tctttatatc ttactccttc
    21241 aacattatcg ccaaataaat ttctatgagt gatatgagcc acttgagcta attcttctgg
    21301 aacattataa ttatgatttt gtgcggtaat ttctaccgtt tttgtatcaa gattgatcac
    21361 aggatgattt gctccatgtt gtccaaattt cattttataa gttgcatatc caaaagcatt
    21421 acttaaaagc tggtgaccta agcaaattcc aagcatggga attttagctt ctgcaagttt
    21481 tttaacctct gcaatctctt gttttaaaat ccttggctca cctggaccat tagaaagaaa
    21541 tacgccttgg atttcacctt ttttatacag agtaatcaac tcatctgctt taacattata
    21601 tggataaact tctacttcaa aacctacttc tacaagttca tttaggatat ttgttttaac
    21661 accataatct ataacagcaa cttttttctc acttctttta gcatcattaa atttttgaaa
    21721 actagcgttc caaacacctt gtttatgaga ataatttttc ttagtgctaa cttcttttac
    21781 aaaatttact tcatcaattt ttgctgattt ttctaaggcg atttttaaat cttctttatt
    21841 tgaaatttca gttgaaatta cagctcttaa attgccatta tttcttatca tttttactag
    21901 atatctcgta tcaagttcat aaattcctat ttttccatgt ttttcaagat aatcttgcag
    21961 actttcttta gcgcgaaaat ttgaaaaact agaacttaat tcacgcatta aaacaccact
    22021 tgcaaaaatt tccttacttt cattatcatt ttcattggtt cccactatac caatttctgg
    22081 catggaaaat acgataaatt gccctgcata agaaggatct gaaataattt cttgataccc
    22141 tgttaaagaa gtgttaaaca caagctctcc aaaaaaagta ccgctctttc caaaagcctt
    22201 agcacttaaa aaaatatcat tttctaaata aatataagcc ttcattaaaa catacctttt
    22261 tttctaagct cttcttgata gagtttttca aagataagat cgtattcttc gctacctgga
    22321 ataggttttg ttttataatt gctaattttc tcataaacct catcttcaag tttttcataa
    22381 attttaagat aagactctat gcttgaaaag attaaatttt taactctatt ttcactcact
    22441 ataaaattaa tataatcatt ctctacaagt tcttccaaaa tttgatgcgc tagatgatta
    22501 tgtctatctt cagaatctaa aatcacatta aattcaggag ctaacttttt cttcacaagc
    22561 caaaacatat ttttacgatc tacttgcata agctccattt catcttcttg ttgctctaaa
    22621 agctctttta ctctttcatc taattttctt tcatttagaa tatctttctc taaaacttct
    22681 attatacata ccttaagctt ttctaattga tctttaattt ctacaaaaga agaattagct
    22741 atatctaaca tcattttatt tgcgatataa ggaatatgtg gtaattttat acgcatcttg
    22801 aaaacctttt atttaataat gtttgaaata atagcttatt tttggtaaaa gaatgttaaa
    22861 aatgaaaaat tttcattctt ttaatcacct aattactagc attattatct aaatttttca
    22921 aaagtaaagt aagctcgcta gctttttttg gatccatttt agataaaaca cctgaaattt
    22981 tacgcgattc caaagaaagc attattttac ttgcatcctc tgcatccatt tgacttaaaa
    23041 catctgcaat ggctgcatct ttcatttggg aataaatttc tttaacccta ccttgagttt
    23101 tatcattgat tgaatttaaa atcttttgtt gttcttctac aagccttgcg ttttcaagct
    23161 ttaattcttc aatttttgcc aaagttgcat taacctcagc ctcttttttt tctaaatttt
    23221 caagcctttc tttttgcaaa gcttcaaaag aggctttata agcttctaaa gattgtcttg
    23281 cttcatcaaa ttctctagtt tgcaattcaa tttgagcttt tctagcttca aaatactgct
    23341 cacaatcttg ttcagctcca aaaactacac ttgaaataaa aactaacaat ataaattttt
    23401 taatcatctt tttctccttt gaaaaaacga ctgattgcaa tttcatctaa aaatttttct
    23461 tcagccttgg caagttcttt ttgcttttgt ttaatttcct cggcttctaa aaccttcatt
    23521 ttttcataat ctaaatgtgc tttttgatat aaaaactgat aatgattcat ttctttttta
    23581 gaaagttcta ctttctccct agctcttgct aaagcctcgc gtcctacttg cgccatactt
    23641 aaattcgatc ttaactctgc tatagatcct gattttggca atacgcctaa attttcacac
    23701 tcttggcgtg aaagttcata agctttttca tattcaagct gtctttgttt ggcttgatta
    23761 agatttgatt ctgctttatc aagttgttgt tttcttactt ttacaacaga attatattta
    23821 cttttcataa gatgatagta tcatctcttt cagggctagt ggaaatatac tttaccttaa
    23881 cccctgcaag ctcttcaagt cttgctatat attttttagc attttctggc aataaatcat
    23941 aatcttttat accaaaaact ttatcccaac catccatttc ttcataaata ggttgaacat
    24001 tttctaaatc gcttggtata tagtcgattt ccataccctt atattcataa gcacgacaaa
    24061 tttttatctt ttcaaaacca tctaaaacat caagcttcat caaagataaa gcatcaagac
    24121 cattaagcct tgctgtatat cttacagcaa ctgcatcaaa ccatccacag cgtcttttac
    24181 gtcccgtgct tacgccaatt tcttttccaa tttgcgcaat tttttctcca tcttcaccct
    24241 tatcctcagt aggaaaagct ccatttccca cacgcgttgc ataagctttt acaataccta
    24301 taatatttcc cgcttcttta ggatttaacc caagtcctgt taaagcacct gctgaaatag
    24361 tacttgagct tgtaacataa ggataagttc catgatcaat atcaagcata gagccctgag
    24421 ctccttctaa aagtactctt ttatcttcat ctaaagcctt ccaaagcatt cttgtagtat
    24481 ctgtaatata aggagttaaa atttcattaa aacgttttaa atcagcaagc aattcttcag
    24541 cacttggaat ttcaatttca agcatttcaa aaaaagtttt attagcttca aaatctttca
    24601 tcaaagcctc acaaagtctt tgtggttcta aaagctctcc aactctatgt cctgtacgat
    24661 taatcttatc tgcataagaa ggtcctatac ccttacctgt tgttcctatg gcatttttgc
    24721 ctttgagttt ttcttttgca atgtctatta aagaatgatg ttttaaattt aaatgagctc
    24781 tatcactgat atataatcta ccttttaaat tttcaaattg agccatttca gcaatcaata
    24841 cttcaggaga aaccacaact ccatttccga taatattaat acatcttgga tgcaaaactc
    24901 cacttggcat aagatgaagc gcatatctta caccatttac ccaaatcgta tgtcctgcat
    24961 tgtgtccacc tgcacttctg caaacaaaat cataattttc acataattta tcaactacct
    25021 taccttttcc ttcatcgccc cattgaatgc cgacaataat atctgctttg ctcataaaaa
    25081 tttccttgat tttacttaat attggcgaga agatgagaga atcgaactcc ccaaagaata
    25141 gtcaactatc ctttcatctg atttgaagtc agtggcgatc accagatacg ctaatcttcc
    25201 aaagtgataa ttatagcgat ttttaatgaa aaacaaaata aatttatcaa tattcttttt
    25261 gacttcatgt taaatttaag ctataatctc actctttttt tagcatcaag ttttgatgat
    25321 tacattttta ggatctttct ttgaattctt ttaaacaaaa atatttaatc aatttttggg
    25381 acaattcccg ttctatgatt gcacttggaa ttttaagtgc agtgtatttt gggatttttg
    25441 gtggcgtttg ggctgttact ggagaaatga cgcgttgggg tggtgaattt ttagaacttt
    25501 taggtatgaa tttagatggg tattcttatt accaaaagca aaatttaaat ggaacccctt
    25561 taacaagaac tgatggtatt atgctcatag gtatgtttat aggttgttta gtagccgcac
    25621 ttttagctaa caaagtcaaa tttcgtctac ctgctagcaa tataagaatt tttcaagcaa
    25681 tagtaggtgg aattctttca ggatatggag caagacttgc atttggatgc aatttagcta
    25741 atttttttac aggtttacct tatttttctt tacacacttg gctttttact gtttttatgg
    25801 ttttaggaat ttatctagga gtgaaaattt gcaacacttc cttttttaaa cctaaagcta
    25861 aattagaacg ggtaaataaa gaaaacttgc cgctaaataa gcaaagtttg cgtacaaaac
    25921 tatattttaa cttaggcata ttgcttttca tagccttttt agtttgggtg ttttatcttg
    25981 tttttacaaa tggcaatatc agcacacaaa acaaacaaag tcttctagct ttagcactga
    26041 tttttggttt tgtttttggc tttgttattt ctagaggaca aatttgtttt acttcttgct
    26101 ttagagattt atttttattt ggtagagata atgctataaa aggcgcatta attggcatga
    26161 ttatcgcttc tttaatcgct tttgctttta tcttgcaagg tcatactagc aaactcatag
    26221 aactttctcc tgctgtagct gtgggagcat ttttgtttgg ttttggcata gtttttgccg
    26281 gaggttgtga gtgtggttgg gcttatcgtg cctttgaagg acaaagtcat tttatgatag
    26341 taggaattgc taatataata ggaactatga ttttagcttt aagttatgac tttttaccaa
    26401 aggcttttaa agaaggtata aaaatcaatc ttttaaccga atttggcaat ttaaatggat
    26461 tttttatcaa ccttatttta ttcatcttaa tatttgcttt tgtagtattt tacaaaaaat
    26521 acttctttaa aaatcaactt aaaggataaa cagtgaaaat tacttatagt ttaaatttac
    26581 aaggtgaagc ttgtccttat cctgctatag caacacttga tgtcttacct aagcttcaaa
    26641 gcggagaaat tttggaagtg ctttgtgatt gcccacaaag tatcaattcc atacctcaag
    26701 atgcaaaaaa ccgtggtttt aaagtgcttg aaatcgatca aagtggaccc acgctaagat
    26761 ttttaataca aaagccttaa aaaaggcttt tgttctcaaa gctcttttaa catcttttca
    26821 taagctgctt tagttccaga tcttacattt gtaaataaac ttgcaataat aatcaccacc
    26881 gaagctgcta aaaaccctgg aactatttca taaagacccg aatttgcaaa attcttccaa
    26941 agtaccacag tagcagctcc tgttatcata cctaagatcg ctcctactct tgtcatccta
    27001 ctccaaaata aagaaaaaag cattacagaa ccaaaagaag ctccaaatcc agcccatgca
    27061 taagaaacta tactcaaaac acttgagttt ttatcagtag aaatcaaaaa cgctattaca
    27121 gctactagta aaacacctaa tttacctaaa tttaatacaa catgacttgg cgcatcttct
    27181 ctaaaaatct ttttataaaa atcttccgct atagtagaac ttgaaaccag caattgtgaa
    27241 cttgccgtac tcataatagc cgctaaaata gcactgagta aaatacctgc tatccaagga
    27301 ttaaataaaa gctgcgacat cacgatgaaa atcttttcag gatcttgcaa acttaattca
    27361 aatttatgca cataagctat acccaaaata cctatcatac aagcacttaa aagacaaacc
    27421 gccatccaag caatacctat aaaagtggcc ataggaatat ctttagtaga acgaatcgac
    27481 ataaaacgca ctaaaatatg tggttgacca aaataaccca aaccccaagc aagtgcagat
    27541 ataatactta taactcccac tccttcgccc atagataaag cttgtggctt tatttctctt
    27601 actatattca tcgcttcacc aaagccacct aaatgataaa gcataaccaa aggcacaatg
    27661 attaaagcca tcatcattaa aagcccttgt atcatatccg tccaacaaac tgccttatat
    27721 ccacctaaaa aagtataagc aacaataata atcgttccag tagttaaagc ataatcatat
    27781 ctgataccaa aagtactttc aaaaagtttt gctccactta caagccctga tgaaacataa
    27841 aaggtaaaaa atatcaaaat taccaccgca catacaatgc gtagtatgtg tttatcatca
    27901 tcaaaacgag tttcaaaata atcaggaata gtcaaagaat ttgcaatcac gctggtataa
    27961 attctaagtc tttttgccac aaaaatccaa tttaaactag ctcctatagt aagtccaatt
    28021 gcaatataag aatctataaa gccacttaca tataaagctc ctggtaatcc cattaaaagc
    28081 caaccactca tatcagaagc ccctgcgcta agtgcagata tcacaggccc catagtacgc
    28141 ccacctaaaa aataatcttc tgaattttta ttttgcttat aaaaataaaa acctatataa
    28201 agcatcaata aggcataagc tacaaacatc actgctattg gggtattaat ttgaactact
    28261 tccatcaatc tctccttgat cattaagata ttgctctaat gcctaaattt ccatagcgat
    28321 gaaaagatat acttaaagct ttttcattaa aataatttaa aagttcaaaa cgaccattta
    28381 acaatggctt ttctcttatg atgattttag caagctttgc agcctcttta taaatctcat
    28441 catttacatc tggctttgcc aaataacgca ctctttcata ttctttaata ctcttgataa
    28501 aattttcttt attttctttt aaaaataata cttttgctcc tatactttga acaattcgtt
    28561 ctatcatact aatatcttgc tcatcataac tgatacttag atcaatattt gcaatatttg
    28621 cacctaaaat cacccctaaa acatctttta agctttcatt tccacaaagt cttaaaacca
    28681 tattctttat tttagtataa gaaaaaagat tatcttctcc acgtatatta acataatctt
    28741 ttgaaacact aaactcattt ttataatgat aagcataaga ttgagacatt ttaattaaat
    28801 cgttcataaa atcttgtgct tcttttaaat ctatttgtgc taattttttt gaaaatttat
    28861 cttcaattaa atgatcatca aaatcttctt gcttaatctc taaaaattga gtgatataat
    28921 tataaattcc cacttttcta cccaaaccta tagctgattt tttaacccct ccaaaaggct
    28981 gacgaaggac tatagcacct gtggttggtt tgttgatata aatatttcct gcttctatat
    29041 gagtgtgaaa atactcccat tctctttcat ctaagctttc aaaacctgca gttaaaccat
    29101 aacctgtgga atttactata tcaatagctt cttttaagtc tttagccttc attacactta
    29161 aaatcggtac aaaaagttca ttcatatgag taaaatcacc ctttttagtg ccatatttta
    29221 tacctggagt catcaaataa ggattattct ctaaaaactt aggttttaat gcccattctt
    29281 cataaggttg taattcatct aaggcctttt gaactttaga acttggctta tcagccaaag
    29341 tacccaattt atttttaaat tcaaaaggat tgcccactgc catagaactt gcagcatcta
    29401 ctaaagtctt tttaaattct tcatcattat aaacctcttc ttctaagact aacaaagaag
    29461 tagccgaaca tttttgacca ctattgctaa aagcagaatg aatgatattt ttaatcgcac
    29521 tatcacgatc agcaaattta gaaactatag tcgcattctt tccgcccgtt tcagcactta
    29581 aaagcaaggt tggattagct tttaacatag cataagcagt atcctcccct cctgtaagaa
    29641 ttgaaaattt aatcgcttca tcaacaagta aatatttaga aatatcactt ccttttgaag
    29701 gtaagaaaat caaagcgtct tttggaatac ctgcatccca aaaacactta caaagcatat
    29761 aacctgttag agttgaaagt gaagaaggtt tgtaaatcac cacattacct gcagctagtg
    29821 gtgcagctat ggtgcccact gaaatcccta taggaaaatt ccaaggagct atggtaaccc
    29881 ctatgccctt aggtgtgaat ttaacttttg gattttgttt tttaagctct tctaaagagt
    29941 gcggataaaa ctctataaaa tcaatagcct cacttacttc aggatcgatc tctaaaaagg
    30001 ttttgcccac ttctaaagct gccaaaccta tcaaatcccc tcttctttct ctcataagtt
    30061 ttgcactttt agctaaaatt tgataaattt catcatgact tttttgtgta aatttggaat
    30121 ttttagctac ttctaaagct tgtttgattt ctttttctcc ggctaaataa gcctttccta
    30181 tcactctatc ttcaatctta tctttaactt ctaaaacatt taaattttct gctttaaaat
    30241 caagctcacc tataacagga taaacatcat aatcttttaa attttcatat ttagctttaa
    30301 tttctttagc ccatgctcta ttttgcgcta aaataaaatc cgtatcactt tcgttgctaa
    30361 attttttact ttcataagaa cttatgatat ttgattcttt atttctatct tgcttacgat
    30421 gtgtagtatt atcaagcgtt tttatgcctt ctaaagattt taaaaaaagt tctttttgag
    30481 ccttccaatt ttcatctcct actttaagat tgaaaaaata acgcataaaa ttatcttcac
    30541 ttgtattttc atcaaggcgt cttacaagat aagcaatggc attgttaaaa tgtgcttcat
    30601 cgcaaactgg agcataaagg attaaatcat gcattttaga taattcataa gaacattgca
    30661 aactcatacc ttcaagcatt tcaaaagtaa aagaatctaa agcacccgct tcacttatgc
    30721 gtgtataagc ataagcaatc tcaaagatat tatgacttgc aattcctatg ttgatgtatt
    30781 tatgattatc tccttcaaga ataaaatcaa gcattttatt ataattgcta tcagtatcta
    30841 tttttttata aaaagtagga agttcccagc ctttttgaga tgcaatggtt tcttcacttt
    30901 ccatattagc acccttaaca aaacggatct taataggctt catacctttt aaaaccctct
    30961 cttttgaaaa agaaaaaagt tttttaagat actcataaga atcaggaata taagcttgca
    31021 aaacaatgcc cgctttaata tcaaatttgg ccacactttc cataaaagct gcaacggtga
    31081 gttctaaatc tctaaattct tccatatcca gattgataaa tttagataca ccttgttttt
    31141 tctcttcttc taaggctaaa gcataaagat aatctagtct ttttactacc tcttctttgg
    31201 aataatcaaa atctataata ttaatttgtg aaaaaatcgt agtaattttt atggaaatat
    31261 aagtgatata acttgatttt aaagcctctt catatttttg catacgatat ttactctcag
    31321 cttcacctaa aacctcttcg ccgattaaat tcacatttaa ggtaatttta tcttgctctt
    31381 ttcttttttt aatatgcggc tctaaaacac tagcgtttgc atctagaacc atagctttag
    31441 tatcttctct taaatgtttg acaaaaaaag gtacacttaa attaggagca aatttgccaa
    31501 aatttaaaaa gctaaaaagt agaaattttt caaaagtgct aaaaaaatcc gctatgccat
    31561 atttactcaa agtatattct ataagctcaa aacttgcatt tttatctttg catctaaaag
    31621 aacgatctaa aagttctata agcataactt tatttttggg attgttaaga agtttttgca
    31681 ttttagcatg aaattctttt tcagaatttg aaatattggc ttctatttgt ccttgcaatt
    31741 cttcagctaa ggctaaagct ttttgtatca tttcgtatct ccta
//
LOCUS       DAPWGO010000009        30879 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.009, whole genome shotgun sequence.
ACCESSION   DAPWGO010000009 DAPWGO010000000
VERSION     DAPWGO010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 30879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30879
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.009"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            2..2350
                     /locus_tag="RJ336_000383"
     CDS             2..2350
                     /locus_tag="RJ336_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HDZ5212856.1"
                     /translation="MLNKELEIFKKNLSSYTQSCRKFFLKQGAFSLYHSKNMDNFIKK
                     AYDIVLKDYFDDFSPPSDNIPFCVLASKAYANNSLCFNESISLIFVYKDIKAFHLKPM
                     IKAFIEILNDAHLQIDSVILEFNGLYNASNELKTSIIQTRFICGSRILFKGIKTKFES
                     ILKENKNDFAKLLLENFKEFDIPFIKQEFNILKDFGGLNHLRSLESLLVLFKTSPKNY
                     ALNFIDEKNLSELRLAGDFLLSLKSAMNLLSAKDEDEFLLINVHDLSELMYKKAKKHF
                     GANELLVQKALQSMHTIGFYTHFLAKQIQDGLNHTLKQEYKFKTLVEVLEYLLKLEDK
                     QVIFDLNLVFALRRLKYSKKDIEKALILFEKIFYKRHSFCVLKLLLDSGILKDLCKPF
                     WTVRFLSDEEGNYSFDEQVFLMLSEFEKYEDELEILQKLKTDEKMILKLVILLSAIES
                     ENEISLAGIYRAYCSKFDLKNEILEWGLKIFKNNNALKDLVEKEDIYNPIVVSSLVSK
                     LENLENLELLYTLTWLKAKALNYNAFYFRVLDKLLENAKQGFEDENLLEESARRVKKE
                     LTLKRSKIFLEQDEILQDKIIHIKSNLFIIKNTFEDIVMISKLAKENDFKFWFSNETN
                     LSLQIVAPLHFNIAIILSSLTNLNLIFMNFFELFDDKIYLRFEYDNIISDEQKLKLCE
                     LLNSNLSGFNLKKIKKPIIKKDELKLDLNYSKMYAKLGLNTKDQQGLMAYLMNVFNEL
                     ELVLCAAKIQTIRQRTRNIFIFQKNEKLEHSEQKLVNLLISE"
     gene            2355..4151
                     /gene="glmS"
                     /locus_tag="RJ336_000384"
     CDS             2355..4151
                     /gene="glmS"
                     /locus_tag="RJ336_000384"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDZ5212857.1"
                     /translation="MCGIVGYIGNNEKKQIILNGLKELEYRGYDSAGMAVMQEGELSF
                     FKAVGKLENLANKCTDFESQGYGFAIGHTRWATHGKPTEINAHPHLGQYSCVIHNGII
                     ENYKEIKDKLEKEGVSFLSQTDTEVIVQLFEFYARNLGVFEAWQKTIKELRGAFATLL
                     VTKKDLNHVYFAKNAAPLIIGKNANKEWYFSSGDAPLIGSCDEVMYLEDLSLGYASKD
                     ELVVYENDVLKSLSFSKLSGDKAYAKKDGFRFFMEKEIYEQSRVMSEVLMGRIQGDEV
                     VFDELNNEDLSQVDEITLCACGTSYHAAMASAYLFERIAKVKAKVEIASEFRYREAII
                     KKDSLFIVISQSGETADTLEALKIAKEQGAKTFAICNVDNSNIVRLAHLSLLTRAGIE
                     KGVASTKAFATQVLTLWMLAIFMAQKRNLNVSAEIKALLHTPNCVSVKQALHEKIHRL
                     SKRYLDGHGFFFIGRDVFYPLALEGALKLKELSYLHAEGYPAGEMKHGPIALADSKLY
                     TIALMPKHMLYEKTKSNVEELIARDSTVLSISPLEFDLSDDFIKTNEQDHYMCEFFEM
                     MIITQLLAMEISIRLGNDVDMPRNLAKSVTVE"
     gene            4286..5677
                     /gene="fumC"
                     /locus_tag="RJ336_000385"
     CDS             4286..5677
                     /gene="fumC"
                     /locus_tag="RJ336_000385"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDZ5212858.1"
                     /translation="MEYRVEHDTMGEVKVPNDKYWGAQTERSFENFKIGCEKMPKVLI
                     YAFANLKKSLALVNNKLGKLDDAKKNAIVQACDEIIAGKFDDNFPLAIWQTGSGTQSN
                     MNMNEVIANRATEIMGGDFRKEKLVHPNDHVNMSQSSNDTFPTAMSIVAVEQVEKKLI
                     PALDELIATFEKKVKEFDGIIKIGRTHLQDATPLTLAQEFSGYLSMLLHSKEQIIASL
                     PTLRELAIGGTAVGTGLNAHPELSQKVSEELTQLIGTKFVSSPNKFHALTSHDAINFT
                     HGAMKGLAANLMKIANDIRWLASGPRCGLGELIIPENEPGSSIMPGKVNPTQCEAVTM
                     VAVQVMGNDAAIGFAASQGNFELNVFKPVIIYNFLQSLDLLADSMHSFNIHCAVGIEP
                     NRAKIDHNLHNSLMLVTALNPHIGYENAAKVAKNAHKKGISLKESAMELGLVGEEDFN
                     KFVDPTKMIGPKA"
     gene            complement(5707..6750)
                     /locus_tag="RJ336_000386"
     CDS             complement(5707..6750)
                     /locus_tag="RJ336_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDZ5212859.1"
                     /translation="MQNGKFFLISFILVILFLLLYLFKGFLLVIIIASLMAVATSNIN
                     AKFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNFDINLVTQTLDYVKN
                     YQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYASSFTKSGAKFLIDMVLICVFYF
                     FANLYGTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGLITM
                     FYGYDGILMGVIFAVSSLIPAIGGALIYVPVSLYEFASNNLNSALVIFIYSVIVISFI
                     ADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILTFFVST
                     LRMYVILKDKNLI"
     gene            complement(6754..7761)
                     /gene="ruvB"
                     /locus_tag="RJ336_000387"
     CDS             complement(6754..7761)
                     /gene="ruvB"
                     /locus_tag="RJ336_000387"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDZ5212860.1"
                     /translation="MDRIVEIEKYSFDETYETSLRPSNFDGYIGQESIKKNLNVFIAA
                     AKKRNECLDHILFSGPAGLGKTTLANIISYEMGANIKTTAAPMIEKSGDLAAILTNLS
                     EGDILFIDEIHRLSPAIEEVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTR
                     AGMLSNPLRDRFGMQFRLEFYKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPR
                     IALRLLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMDLRYLELLTAAKQKP
                     IGLASIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASAKSYSALKLNYEKTLFE
                     E"
     gene            7852..8262
                     /locus_tag="RJ336_000388"
     CDS             7852..8262
                     /locus_tag="RJ336_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase"
                     /protein_id="HDZ5212861.1"
                     /translation="MGILTKLELDYEIDDIEKFLQFFRTMCDRFEPLIIKLGSDSVRY
                     KEAIKELETLAHNTAWAARRLNLEEVTDFCVFCEEMMAQANRFNGPASDEFTDWMLLM
                     SDQFEKYCRSYENDDSVLAVFNPLIVNVPNIISK"
     gene            8263..8620
                     /gene="ssrA"
                     /locus_tag="RJ336_000389"
     tmRNA           8263..8620
                     /gene="ssrA"
                     /locus_tag="RJ336_000389"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            8826..11099
                     /locus_tag="RJ336_000390"
     CDS             8826..11099
                     /locus_tag="RJ336_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDZ5212862.1"
                     /translation="MKKNASSKILLSLGVATLLYSSAFAQEINLTQSSDVGNYFEENG
                     KDINLKNPDKYKGQDLNIKMGVWDLPNDDYDSADYRLNIDIGKNNTLSFTHNNGQNPA
                     YVTNLNATAKEVKTTDIVLQAFAPSVINGNLTMTSSGAGTITEDEKKGSGIILYNGAV
                     EGKSANGSLTINGNFTADKTLFATYGNFVKVNGTANLTNSNFGLMKRSYTDLEANNVV
                     MVQAKDFNENILKANNNAGALLLKFASDYISTDVQGKDPLEAGTIIDISDEDKYGDGE
                     KGLVDYKLSVQNCGGNKCLVINGGATAAAKDKLVQLQVDIDAIDKLLKNEFDSSQDEE
                     WTKAKEALEKQKTELEQLKQEAEKNGGKIDDEKYIDLVNKNSNLNLSANDKASILALR
                     SITEQLGSIGADLASREGVKLALQIKKDTDNTGKSVSNLNSASSAVNTTMNISNDVSI
                     GSRVAMLNNPFGTYASKMNGLKFAALDSDMRPSYVNEYTNSVWANAFGGANIIDGDSG
                     AMYGATVGVDKQANDDVLWGTYFTYANAKIKDNNLEQKSDNFQLGMYSTINIAPQWEL
                     NLKAYAQVSPTKQDNVQVDGAYNSDYTSKFLGLSANAGRVFDLSDNTLFIKPFAGVNY
                     YFSYTPSHTENGAIAKDIDSMKNNSVSVEVGAEFRKYMNENSYIFVTPKIEQFVINSG
                     DDYTANLAVNNAFFTSVEANNKKKTYGQIIVGGNVDFTNQLSMNLGFGAKQILAGKVD
                     NKNETYLSGQVGLKYKF"
     gene            complement(11241..13325)
                     /locus_tag="RJ336_000391"
     CDS             complement(11241..13325)
                     /locus_tag="RJ336_000391"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HDZ5212863.1"
                     /translation="MQTSPDMFINRELSWLRFNSRVLDQCSKNLPLLEKLKFIAIYCT
                     NLDEFYMIRVAGLKQLFSAGVNASSSDEMTPLQQLKAIRKYLHQEKELLERYFNEITS
                     ELEKENLFIKHYENLDENLKQKCDEYFFSNIFPVIVPIAVDATHPFPHLNNLSFSLAV
                     KICDKAHPELVKFGMIRIPRVLPRFYEVSANIYVPIESIVHQHAEEIFPGYKLLASAA
                     FRVTRNADMVIEEEEADDFMMILEQGLKLRRKGAFVRLQIQKDADEQIVEFLNTHMKI
                     FHKDVYEYSILLNLPSLWQIAGNKTFTHLLSPLYTPKTLPPFDENLSIFDAVEKEDIL
                     IIQPFESFDPVYKFIKEASKDPEVISIRMTLYRVEKNSNIVQALIDAASDGKQVTVMV
                     ELKARFDEENNLHWAKALENAGAHVIYGITGFKVHAKVSQVIRKQGDKLKFYMHLSTG
                     NYNASSAKIYTDVSYFTSKAEFARDTTSFFHILSGFSKNRRLQTLSMSPNQIKEKVLE
                     MIRIETSKKNEGVIVAKMNSLVDSDIIQALYEASMEGVQIDLIIRGICCLKPDEEYSK
                     NIRVRSIIGKYLEHARVFYFKHSEPNYFISSADWMPRNLERRLELMTPIYDERSKAKL
                     AQFLRLQLSDNVLAYELKNNGEYEKIPSSEKIIDSQQTLEEYVSKIYKTLKKDTDQSR
                     ATHLASKLFKEN"
     gene            13512..14027
                     /gene="nrfH"
                     /locus_tag="RJ336_000392"
     CDS             13512..14027
                     /gene="nrfH"
                     /locus_tag="RJ336_000392"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HDZ5212864.1"
                     /translation="MIILRRKILKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLS
                     NASESCNNCHIMNEVYNEYMAGPHSQKVKGEPRATCVDCHLPHNFVAKWIAKAQSGLG
                     HAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
                     CHKDVGHKHGI"
     gene            14042..15874
                     /locus_tag="RJ336_000393"
     CDS             14042..15874
                     /locus_tag="RJ336_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HDZ5212865.1"
                     /translation="MKKNILRLGIVVLVLLIAGVLWLNNDINQKKEDEANKNAIAANA
                     DFSLLSDDDPNFEKWGKVFPEQLKMYLTVEKEEPKATEFGGNLAYSKLIRFPQLTILW
                     AGYPFSLDFNEERGHFWVQIDQMKTARNNKDFLNAHGLAAFKGQPAACMNCHSGWTPW
                     LIKNVAKGDFTAFNSTNYWTMIKNIPAVDGIVENSPEHAGSHGGKRMGVTCADCHNPN
                     DMSLRLTRPAAINALVSRGYEKDPVQGVKATREEMRTLVCSQCHVEYYFKPTGEKVKV
                     MGETIVDDSSKKWWNGTQKNYDEYEFWRDGNKAKEIETDGIVLTFPWSEWKKGQPFRI
                     EMLDDYYDKVRGVFGADFTHKLTGAQIIKIQHPESELYSGGVHAANGVSCVDCHMPYV
                     REGAKKVTQHNITSPLRDINSACKSCHKQSEDYLKAQVLDIQNSVAHDQRTAEYAIVS
                     LIMDTKKLRDELGNMEKFQSDGKADTKKISEELKEVLELHRKAQMRADFVNAENSTGF
                     HNPREASRMLLQAVDMARMGQTKLVEIAAANGIKDFKTSNLGFEDIQKFNPGELYYKV
                     DVNNHKAGERYYADEKDVNGNPPKELLEHDKELAPYNYQVIDKK"
     gene            16010..16564
                     /locus_tag="RJ336_000394"
     CDS             16010..16564
                     /locus_tag="RJ336_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212866.1"
                     /translation="MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYIFGINQDVGLK
                     VEQYQLSKVIESGKEREALIEYLKTNGLKVPSNTNIIKSKDKGITIGGTHYSANITQN
                     STNEYNITLKTRSLLGDMIMLHKDKGAWYFSVLSVGFGITLFMLYISGLMITLFANKK
                     DRSKQFAVLGVGVVVTLLLAYLSL"
     gene            16628..16717
                     /locus_tag="RJ336_000395"
     tRNA            16628..16717
                     /locus_tag="RJ336_000395"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16662..16664,aa:Ser,seq:gct)
     gene            complement(16926..17207)
                     /locus_tag="RJ336_000396"
     CDS             complement(16926..17207)
                     /locus_tag="RJ336_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDZ5212867.1"
                     /translation="MKIVPTPKFKNELRHIVNFIKLDSSFYAKEFLNDINSICKNLSF
                     MPYKNRKSLSFDNENIRDLIFKGYIIPYLIDKSKNEIVILGIYKSNLWD"
     gene            complement(17208..17429)
                     /locus_tag="RJ336_000397"
     CDS             complement(17208..17429)
                     /locus_tag="RJ336_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212868.1"
                     /translation="MNLEFSKETQHFLTNYCKDNNLSEKEVLELALSYLEHKIRIDGY
                     KKDIELYKQDKLKTLDFDETFNDIRKDLE"
     gene            complement(17585..18577)
                     /gene="ceuB"
                     /locus_tag="RJ336_000398"
     CDS             complement(17585..18577)
                     /gene="ceuB"
                     /locus_tag="RJ336_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin ABC transporter substrate-binding
                     protein CeuB"
                     /protein_id="HDZ5212869.1"
                     /translation="MKKSLVFAFFAFFLSLILTACNSNSNENNASSTTKTNTATMKVL
                     PISMSDEGDSFLVKDSLGENKIPKNPSKVVILDLGILDTFDALKLNDKVAGVPAKNLP
                     KYLQQFKNKPSVGGVQQVDFEAINALKPDLIIISGRQSKFYDKLKEIAPTLFVGLDNA
                     NFLSSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAKSIVDEDKKALIILTNSNKIS
                     AFGPQSRFGIIHDVLGINAVDENIKVGTHGKSINSEFILEKNPDYIFVIDRNIIVGNK
                     ERAQGILDNALVAKTKAAQNKKIIYLDPEYWYLASGNGLESLKTMILEIKNAVK"
     gene            complement(18590..19345)
                     /locus_tag="RJ336_000399"
     CDS             complement(18590..19345)
                     /locus_tag="RJ336_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5212870.1"
                     /translation="MIKLKNITKFYDNKAIISDLSLDFHKGKITSIIGANGAGKSTLL
                     ALASRLIKPSSGEIYIDGMKLKDYKEQILAQKISILKQQNNINLRLKVEELVAFGRFP
                     HSQGRLNANDKIKINEALEYMGLSNLRNEFLDTLSGGQKQRAFIAMIIAQDTEFIMFD
                     EPLNNLDMKHSVQIMQLMKNLVKDFNKSIAVVLHDINFASIYSDEIIALKDGKLLKQG
                     SKDEIINQENLKQIYDMDIPVSQIDGKKICIYF"
     gene            complement(19342..20280)
                     /locus_tag="RJ336_000400"
     CDS             complement(19342..20280)
                     /locus_tag="RJ336_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDZ5212871.1"
                     /translation="MRKKMLILSFLTLGMIGIFILVGLNGFDEYALKSRFLQIAAIII
                     VAICIAVSTVIFQTLCNNKILTPAIIGLDSLYMLLQSALIFSFGAANLSVYKNDINFL
                     ITLVCMVVFSLGLYKILFSSDRSIYLIMLLGLVFGTLFSTLSSFFEVLIDPDEFMVIQ
                     GRMFASFDNIAFDILILAYIISFLSFIWIFRYMKFLDPLNLGKDLAINLGINYQKISK
                     QLMIIIAILTSISTALVGPITFLGLLVANITYELFKTAKHSILLSACILISILALLGG
                     VFFVSRVFDYNATISVVINFLGGIYFIYLVLKGNKL"
     gene            complement(20273..21241)
                     /locus_tag="RJ336_000401"
     CDS             complement(20273..21241)
                     /locus_tag="RJ336_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ5212872.1"
                     /translation="MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQL
                     EIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKFVSPTTAGTMDCAKFGILISLIF
                     FAGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
                     YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDVALNL
                     GISYNGILFLGLMIVSIITSLVIVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALC
                     GALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKVYA"
     gene            complement(21327..22316)
                     /locus_tag="RJ336_000402"
     CDS             complement(21327..22316)
                     /locus_tag="RJ336_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HDZ5212873.1"
                     /translation="MRKIALFLSLCVFIWASDLQQALEYEKQGDYKKAMEIYKKLALK
                     NSSVLISQEQNNSSKATQTQNSITIKKEEKQDFSRLALANYLGENESFNPLGISSYKM
                     NYFLPFAYSFNSLGVNNNKSEAKFQLSVKKRLFENLLGLDEKYYIAYTQTSWWQIYEH
                     SSPFRETNYQPEFFIDFPLYLKDYEFFNNLRVGILHESNGKGDENLQSRSWNRIYVST
                     AILYNKFLFVPRLWYRIPESKKDDDNPAILHYMGIFDVNLAYLGDDYFINLMLRNNLK
                     FHDNKGAIQVDLGYDIFNNGIYWYLQYFNGYGESLIDYNKHLQRLSTGFLISY"
     gene            complement(22313..22888)
                     /locus_tag="RJ336_000403"
     CDS             complement(22313..22888)
                     /locus_tag="RJ336_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDZ5212874.1"
                     /translation="MQLNELNCVILCGGKSSRMGQDKSKLILKNQNLTQFQVEKFSKI
                     FKNVYVSAKEDKFENHFSLIKDSLEFEVYSPMLALYSILSNFKNEFVFVLSVDSPKVG
                     ENELLKMLPFLEQNYKIIIAKTPLHTHPLCGFYHSSLAQTCKNFLEKNEQKIGLLFSE
                     IKTKFVEFEDEDAFLNLNFYEEYEKFKSELK"
     gene            22950..24257
                     /locus_tag="RJ336_000404"
     CDS             22950..24257
                     /locus_tag="RJ336_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HDZ5212875.1"
                     /translation="MKYTELLQLQTFFSQFKKIDFIKRINDNILELSFDRKRFIFDLT
                     RAMSAIYTAKFNAKNYNAPFDFMLKKYFSNAFIKEVKVLEGNRILCFSVKANKAYKSY
                     ESKIYFEFTGKNTNVILTDKKNLIIEALRHIDKSYRVVKPNVILEPLKPYKMDENFEE
                     IKDFADYFSRKFTSIYESKIKQIKNLKLAQVDKKIQNLQELFSSLDEENSLLLKALEY
                     RKRADVLFANLSVLKDYEREFKLDDFEGKELEFKLEFSPKQSANLYYKNAKKLEQKAK
                     NLNIQRQNLKEKLDFTLSLKELLLQAKSEIELEILLPKKNSKKNQDYKQEDLVANFYY
                     NEFKICVGKNEKGNEFLLKNAKKDDLWLHVRDIPSAHTLIVSNKQKISLDVIEFAARL
                     CVSFSKLKKGSYWVDYTLKNFVKVQQKAFVNYTNFKSINITKD"
     gene            24259..24597
                     /locus_tag="RJ336_000405"
     CDS             24259..24597
                     /locus_tag="RJ336_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212876.1"
                     /translation="MPVSPLGNINYINQNMAYPATQASNELAKEGFAATLNMAEFNEK
                     EKTLNKLEKVNETHEIKEEIKEKAEQEEKKKKHNQEAKTSDNEKNEEDESKDPNFKDA
                     QSIHRLDISI"
     gene            24606..25331
                     /locus_tag="RJ336_000406"
     CDS             24606..25331
                     /locus_tag="RJ336_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDZ5212877.1"
                     /translation="MFNTTRIISALVMIGAIIIIALIDQFFINFIVFAVLLYLSFSEA
                     KKLFALENISIIPLAIAFILGSLSHKALLFGILALLLVVGYLVYKKASLKPALIYIYP
                     SLPILALWQVYLDQGMFALFWLIIIVAACDSGAYFIGKLMGKTPFSPTSPNKTLEGVI
                     GGLICASVIGTILGIFVYSFWLSLLCSFFVAIFAVIGDLFESYFKREAGVKDSGDLIP
                     GHGGVLDRIDAVIIAAFVMVTFL"
     gene            25328..26398
                     /locus_tag="RJ336_000407"
     CDS             25328..26398
                     /locus_tag="RJ336_000407"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDZ5212878.1"
                     /translation="MILFGSTGSIGINTLKLAALKNIRISALACGDNIALLNEQIARF
                     KPKFVAIKDSKNKHLVKHDRVFIGQEGLEQILTECQDKLLLNAIVGFAGLKSTLKAKE
                     LGKNIALANKESLVVAGSFLKGAKFLPVDSEHAALKFLLEGKKNIAKLYITASGGAFY
                     KYKIKDLNQVSLKDALKHPNWNMGAKITIDSATMANKLFEIIEAYHLYDFKEIDALIE
                     PRSLVHAMCEFKNGASTAYFSKADMKLAISDAIFEKQDTPILEAVDFSKMPALKFHPI
                     STKKYPIFKLKNTFLKEPNLGVIINAANEVGVYNFLENKSGFLDIAKCIFKALDHFGV
                     PKISSIEEVFEYDFKTREYLRS"
     gene            26400..27794
                     /locus_tag="RJ336_000408"
     CDS             26400..27794
                     /locus_tag="RJ336_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deacylase"
                     /protein_id="HDZ5212879.1"
                     /translation="MKFFLTILFFITSIFALELDFSVGENGKSLDDNNTVLIFGGIQG
                     DEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIKRSRGNNGDLNRKFANISPKDPD
                     YKTVQRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASK
                     YPDLENIATQTVNSVNSSLADPKHAYHLKNTKTQELGDTEMLKALTYFVISNHKAAFA
                     NEASKNLPVNLRAYYHLLAIENYLKTAGIEFSRDFELTPQGVDKAINKELEVKLFDDR
                     ILLSLKNPRKVINYVPFPVNKELNYNTSNELTAVIAEGNSFYIQYGNRFQTRLYPEYL
                     EFSDAFNEVTFQVDGNETTVPFGTKVKVKENFLIPKIANVRVNIIGFDHGKDESGILV
                     HKKNMQTQYSLDMAGKIYRVEFYELRGANLQQLLEANINSKLIKNAKNLDLNTLKMAR
                     SKDKFLGSILVEFE"
     gene            27791..28798
                     /gene="tsaD"
                     /locus_tag="RJ336_000409"
     CDS             27791..28798
                     /gene="tsaD"
                     /locus_tag="RJ336_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDZ5212880.1"
                     /translation="MKNLILAIESSCDDSSIAIIDKNTLECKFHKKISQELDHSIYGG
                     VVPELAARLHIEALPKILKQCKEHFKNLCAIAVTNEPGLSVSLLSGISMAKTLASALN
                     LPLIPINHLKGHIYSLFLEEKISLDMGILLVSGGHTMVLYLKDDANLELLASTNDDSF
                     GESFDKVAKMMNLGYPGGVIIENLAKNAKLKNISFNIPLKHSKELAYSFSGLKNAVRL
                     EILKHENLSDDIKAEIAYAFENTACDHIMDKLEKIFNLYKFKNFGVVGGASANLNLRS
                     RLQNLCQKYNANLKLAPLKFCSDNALMIARAAVDAYEKKEFVSIEEDILSPKNKNFSR
                     I"
     gene            28799..29314
                     /locus_tag="RJ336_000410"
     CDS             28799..29314
                     /locus_tag="RJ336_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDZ5212881.1"
                     /translation="MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNL
                     KTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGNFNGTKEVNFRVGDDKECLKLVF
                     INKADFILMGISSNEASKNAIINAANQSHEDLENIDLTSSSSNKACVILSKNENFKNL
                     ASKTYLLIGGM"
     gene            29314..30564
                     /locus_tag="RJ336_000411"
     CDS             29314..30564
                     /locus_tag="RJ336_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002822030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDZ5212882.1"
                     /translation="MIVSKTYEIDSCDDVELDIKRESKLEFKLCFDDEKEIKALVFII
                     PGLGGDVDENYREHLAEFVAGEFNVAVVSVNYHCIGNRPQTGSSFFMDDIDKLILKTS
                     CEALNIQVNLDKLNSLEELSSTLKEVDHILEEQKNQKLINPNFKLSIHLSLQPTKNEY
                     QNFGVMQAQDLLNAALYLKAHAPFDTMGGGIPVIMIGSSHGGYLAHLAAKFAPWLING
                     VIDNSSYAKFLWRLIGFGKEIDFTKYYCFGTGIFFKHIHIYCSDKTFWTSNSSSNNFF
                     SIPRRMIRYILELNHIENQANYPKPYYVSYHSFYDKEIAPPDEKLELYKYLKQFDFDA
                     ELHMIKNPDQIDGKFIKSLDHGMGMSIKTLISKELPCILEKVLSESDSKKEWKNKSIS
                     YPCDGLVYRFSEKNNKINLDITET"
     gene            30575..>30879
                     /locus_tag="RJ336_000412"
     CDS             30575..>30879
                     /locus_tag="RJ336_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ5212883.1"
                     /translation="MTILEKNIQALLSGVNEPLGNKLLNFIQNKTCSRFNIDENLNIY
                     DKTHNVFMYENLEEEINFFYQSILEKTHRYPFACIYGIGNALLIKNLSKHYKHLFIF"
BASE COUNT        11004 a         4274 c         5151 g        10450 t
ORIGIN      
        1 tttgttaaat aaagaattag aaatttttaa aaaaaatctt agttcctata cccaaagttg
       61 tagaaaattt tttcttaagc aaggggcgtt tagcttatat cattctaaaa atatggataa
      121 tttcataaaa aaagcttatg atatagttct taaagattat tttgatgatt tttcacctcc
      181 aagtgataat atcccttttt gtgttttagc aagcaaagca tatgcaaata atagtctttg
      241 ttttaatgaa agtatttctt tgatttttgt ttataaagat attaaggctt ttcatttaaa
      301 acctatgatt aaggctttta tcgaaatttt aaatgatgcg catttgcaaa ttgactctgt
      361 tatcttagaa tttaacggac tttataatgc tagcaatgag cttaagactt ctataataca
      421 aactcgtttc atatgtggtt ctaggatttt atttaaaggg attaagacaa aatttgagag
      481 tattttaaaa gaaaataaaa atgattttgc caagcttttg ctagaaaatt ttaaagaatt
      541 tgatattcca tttataaagc aggaatttaa tatcttaaaa gattttggcg gattaaatca
      601 tttaagatcc ttagagagtt tgcttgttct ttttaagact tctccaaaaa attatgcctt
      661 aaattttata gatgaaaaaa atttaagtga gttgcgttta gctggagatt ttttactttc
      721 tttaaaatca gcgatgaatt tattaagcgc taaagatgag gatgagtttt tacttattaa
      781 tgttcatgat ttgagtgaat taatgtataa aaaagctaaa aaacattttg gagcaaatga
      841 gttgttggtt caaaaggctt tgcaaagtat gcatactata ggtttttata cgcactttct
      901 agcaaagcaa attcaagatg gattaaatca tactcttaaa caagaatata aatttaaaac
      961 tcttgtggaa gttttagaat acttattaaa acttgaagat aaacaggtta ttttcgatct
     1021 taacttggtt tttgccctaa gaagattgaa atacagtaaa aaagatatag aaaaagcttt
     1081 aatacttttt gagaaaattt tttataaaag gcatagtttt tgtgttttaa aacttttgct
     1141 tgatagtgga attttaaaag atttatgcaa gcctttttgg acagttcgtt ttttaagcga
     1201 tgaagaagga aattatagtt ttgatgagca agtttttctt atgttaagtg aatttgaaaa
     1261 atacgaagat gagcttgaga tactccaaaa acttaaaacc gatgaaaaaa tgattttaaa
     1321 gcttgtgata cttttaagcg ctatagaaag tgaaaatgaa atttctttag caggcatata
     1381 tagagcgtat tgctccaaat ttgatttaaa gaatgaaatt ttagaatggg gtcttaagat
     1441 atttaaaaac aataatgcct taaaagatct tgtagaaaaa gaagatatat acaatcctat
     1501 tgttgtaagt agcttggttt ctaagctaga aaatttagaa aatttagagc ttttatacac
     1561 tttaacttgg ctaaaggcta aggctttaaa ttataatgct ttttatttta gagttcttga
     1621 taaactttta gaaaatgcaa aacaaggttt tgaagatgaa aatctacttg aagaaagcgc
     1681 aagaagagta aaaaaagaat taacacttaa aagaagtaag atttttttag agcaagatga
     1741 aattttgcaa gataaaatca tacatatcaa atcaaatctt tttattataa aaaatacttt
     1801 tgaagatatt gttatgattt ctaaattagc caaagaaaat gattttaaat tttggtttag
     1861 caatgaaaca aatcttagtt tgcaaattgt tgcaccactt cattttaata ttgccattat
     1921 tttaagttct ttaacaaatt taaatcttat tttcatgaat ttttttgaac tttttgatga
     1981 taaaatttat ttaagatttg aatatgataa tattattagt gatgagcaaa aactaaaact
     2041 ttgcgagctt ttaaattcaa atctttctgg ttttaatttg aaaaaaatta aaaagccaat
     2101 cattaaaaaa gatgagttaa aattagactt aaattattct aaaatgtatg ccaaattagg
     2161 tcttaatact aaagatcagc aaggtttaat ggcgtatttg atgaatgttt ttaatgaact
     2221 tgaacttgtt ttatgtgcag caaaaattca aaccataaga caaaggacgc gtaatatttt
     2281 tatttttcaa aagaatgaaa aattagaaca tagcgagcaa aagttagtta atttattaat
     2341 aagtgagtaa aaaaatgtgt ggaatcgtag gctatatagg aaataatgaa aaaaaacaaa
     2401 ttatactaaa tggacttaaa gaattagaat atcgtggcta tgatagtgcg ggtatggcag
     2461 tgatgcaaga aggagagctt agttttttta aagctgtagg aaaacttgaa aatttggcga
     2521 ataaatgcac ggattttgaa agtcaaggtt atggttttgc tataggtcat acaagatggg
     2581 caactcatgg taagcctact gaaatcaacg cacatcctca tttaggacag tattcttgtg
     2641 tgattcacaa tggtattata gaaaattata aagaaatcaa agataaactt gaaaaagaag
     2701 gcgtgagttt tttaagtcaa acggatactg aagttattgt ccagcttttt gaattttatg
     2761 caagaaattt gggagttttt gaagcttggc aaaaaaccat caaagaactt cgcggtgctt
     2821 ttgctacttt gttagtaaca aaaaaagatc tcaatcatgt gtattttgca aaaaatgctg
     2881 cccctttgat tatcggtaaa aatgcaaata aagaatggta tttttcttca ggtgatgcac
     2941 ctttgatagg aagttgtgat gaggtaatgt atcttgaaga tttaagcttg ggatacgcga
     3001 gtaaagatga gcttgtcgtt tatgaaaatg atgttttaaa atcactttct ttttctaagc
     3061 tttcaggcga taaggcttat gcaaaaaaag acggctttcg tttttttatg gaaaaagaaa
     3121 tttatgaaca aagtcgtgtg atgagtgaag tgttaatggg acgtattcaa ggcgatgaag
     3181 tcgtttttga tgagctaaat aatgaagatt taagtcaagt agatgaaatc acgctttgtg
     3241 cttgtggaac aagctatcat gctgcaatgg caagtgctta tttgtttgaa agaattgcta
     3301 aagttaaagc taaagtagaa attgcaagtg aatttcgcta ccgtgaagca attataaaaa
     3361 aagattcttt atttatcgtt atttctcaaa gtggagaaac agcagacact ttagaggctt
     3421 taaagattgc aaaagagcag ggcgctaaga cttttgcaat ttgtaatgtg gataattcta
     3481 atatagtgcg tttagcacac ctaagtcttt taactcgtgc gggtatagaa aaaggagttg
     3541 cttcaactaa agcttttgcc actcaggttt taacactttg gatgcttgct atttttatgg
     3601 cacaaaaaag aaatttaaat gtttctgctg aaattaaagc acttttgcat actccaaatt
     3661 gcgtgagtgt aaaacaggct ttacatgaaa aaattcatcg tttatctaag cgttatttag
     3721 atggacatgg ctttttcttt ataggcagag atgtgtttta tcctttggct ttagaaggag
     3781 ctttgaaact taaagaatta tcttatcttc acgctgaggg ttatcctgca ggagagatga
     3841 aacatggccc tattgctttg gctgattcta agctttatac tatagcttta atgccaaagc
     3901 acatgcttta tgaaaaaaca aaatcaaatg ttgaagagct tattgctagg gattctacag
     3961 tgcttagcat ttcaccttta gaatttgatt taagtgatga ttttataaaa accaatgagc
     4021 aagatcatta tatgtgtgaa ttttttgaaa tgatgatcat tactcaactt ttggcgatgg
     4081 aaatttccat aagacttggt aatgatgtgg atatgccaag aaatttggct aaaagcgtaa
     4141 cagtcgaata atccgtgcag tttaaataaa ctgcacataa ctttcaaata cttcaaaaaa
     4201 atataaataa attttaaatt ataagctaac tttatgctta tttttgttta aataattcta
     4261 acaatatttc tagaaaggaa acactatgga atatagagtt gaacacgata ctatgggtga
     4321 agttaaggtc ccaaatgaca aatattgggg agctcaaact gaaagaagtt ttgaaaattt
     4381 caaaatcggt tgtgagaaaa tgccaaaggt tttaatctat gcttttgcaa atcttaaaaa
     4441 atctttagct ttagtcaata acaaacttgg caaacttgat gatgctaaga aaaatgctat
     4501 agttcaagct tgcgatgaga ttatcgcagg taaatttgat gataattttc cacttgcgat
     4561 ttggcaaaca ggttcaggca cacaaagtaa tatgaatatg aatgaagtta ttgcaaatcg
     4621 tgccactgaa atcatgggcg gagattttcg caaagaaaag cttgtacatc caaatgatca
     4681 tgttaatatg agtcaaagtt caaatgatac ttttccaact gctatgagta tcgttgcggt
     4741 tgagcaagta gagaaaaagc ttatccctgc gcttgatgag cttattgcaa cttttgaaaa
     4801 aaaagtaaaa gaatttgatg gtattatcaa gataggacgc acgcatttac aagatgctac
     4861 gccacttact ctagcacaag aatttagtgg atatctttct atgcttttgc attcaaaaga
     4921 gcaaatcatc gcttctttac caactttaag agaacttgcc ataggaggaa ctgcagtagg
     4981 aacagggctt aatgcacatc cagaattaag ccaaaaagta agtgaagagc taactcaact
     5041 tataggtacg aaatttgttt caagtccaaa taaatttcat gctttaacaa gtcatgatgc
     5101 gattaatttt actcatggag ctatgaaagg tttggctgca aatttaatga aaattgcaaa
     5161 tgatataaga tggttagctt caggcccaag atgtggtctt ggtgagctta tcatccctga
     5221 aaatgagcca ggaagttcga ttatgccagg taaggtaaat cctacccagt gcgaagctgt
     5281 tactatggtt gctgtacaag tgatgggaaa tgatgcagct atcggatttg cagcaagtca
     5341 aggaaatttt gaacttaatg tgtttaagcc tgtgattatt tataatttct tgcaaagtct
     5401 tgatttgttg gctgattcta tgcattcatt caatatccat tgtgctgtag gtatagaacc
     5461 aaatcgtgca aaaatcgatc ataatcttca taattcttta atgctagtta ctgctctaaa
     5521 tccacacata ggttatgaaa acgctgctaa agtagccaaa aatgctcata aaaaaggtat
     5581 ttctttaaaa gaaagcgcaa tggagcttgg tttggttggc gaagaagatt tcaataaatt
     5641 tgttgatcct actaaaatga taggcccaaa agcctagaac ataaaacttg ccttttttaa
     5701 ggcaagttaa attaaattct tatcttttaa aatcacatac attcttaaag ttgatacaaa
     5761 aaaggttaaa atcgcaggac ctagtataat accccaaaaa ccaaaggttg aaattcctgc
     5821 tatcatagcc aagaaaatta aaagttcgtt gattttggta ggggttttta caagtttttt
     5881 gttgatccat ttgataatta aaggtttgat taaagtatct gctataaaag aaattacaat
     5941 tacagaataa ataaaaataa caagagctga gttaagattg tttgaggcaa attcataaag
     6001 acttacaggc acataaatta aagctcctcc tatagcaggt atgagagaac ttacagcaaa
     6061 aattactccc attaaaattc catcataacc ataaaacatt gtgattaaac caaaaagtgc
     6121 accttgaaat attgctacaa ttaccataga gtaaagcaca acagccataa cattacccac
     6181 ttcgcttaaa acatcatcga gttctttttt atcaatggga atgatggatt taagatagat
     6241 aacaagttct gttccatata gatttgcaaa gaaataaaac acacaaatta aaaccatatc
     6301 tataagaaat ttagctcctg attttgtaaa acttgaagca taacttagaa tttgtttaga
     6361 aatgctattt aaatctatag aagctaaaaa ttctttgatt ttaggttcta aaaaattaaa
     6421 gctttcaggc aaagtaaatt gatagttttt gacataatca agtgtttgtg tgactaaatt
     6481 aatatcaaaa ttttttaaag ctttggcaag ttctatcata gcataaacaa aaggtgcaaa
     6541 gaaaagcaaa accatacaag ttgttgtaag aatggaagct aaaaatttat gccctttagt
     6601 aagatttaaa aatttcgcat tgatatttga ggtagctacc gccattaaac tagctatgat
     6661 aattacaagt aaaaaacctt taaaaaggta aagcaaaaga aataaaatga ctaaaataaa
     6721 gcttataaga aagaattttc cattttgcaa aatttactcc tcaaataaag ttttttcata
     6781 gtttagtttt aaagcactat agctttttgc actcgctata cgcccttttg cagtgcgttc
     6841 tatatagcca ttagctaata aataaggctc gattacatct tctatggtat tttcatcttc
     6901 gcttaaagcc gcagcaatac ttgcaagtcc gataggtttt tgcttagcag cagttaaaag
     6961 ttcaagatat cttaaatcca tcgcatcaaa accaagctca ttaactccta aagaatttaa
     7021 ggcctcatta gctctttttt ctgtgataat ctcttcatca ttaacatcag caaaatctct
     7081 aactcttttt aaaagcctta gagctattct aggagttgaa cgacttcttt tagcgatctc
     7141 aagtgcggct ttttcttcac aagttttatt aagttttaaa gctgcttttt gcaagattag
     7201 ggcaagttcg ctatctttgt aaaattctaa tctaaattgc ataccaaaac gatcacgtaa
     7261 aggattgcta agcatacctg cacgcgttgt agcccctata agagtaaatt ttggtaaatc
     7321 gatttttata gtttgagcag ctgggccact acctataatg atatcaaggc ggtaatcctc
     7381 cattgcaggg taaagcactt cttcgatagc agggcttaag cggtgaattt catcgataaa
     7441 aagtatatct ccttcgctaa gattggttaa aatggctgct aaatctccgc ttttttctat
     7501 cataggagcg gcggttgttt tgatatttgc acccatttca taggagatga tattagctag
     7561 tgttgttttt ccaagtcctg caggaccgct aaaaagtata tgatctaaac attcattgcg
     7621 ttttttagct gcagctataa agacatttaa atttttttta atgctttctt gacctatata
     7681 accatcaaaa tttgaaggac gcaacgaagt ttcgtaagtt tcatcaaagg agtatttttc
     7741 tatttctact attctatcca tatctttgct tatattttgg aaaaattaaa ataagatttt
     7801 agctaaaatt tgctagaatt tacattaaac tttaatgatt atggtttaaa aatgggaatt
     7861 ttaacaaaat tagaattaga ttatgaaatt gacgatatag aaaaattttt gcaatttttt
     7921 agaaccatgt gcgataggtt tgaaccttta atcatcaagc ttggaagcga tagtgtgcgt
     7981 tataaagaag ccataaaaga gcttgaaact ttagcacaca ataccgcttg ggcagcaaga
     8041 cgcttaaatc ttgaagaagt gactgatttt tgtgtatttt gtgaagagat gatggcgcaa
     8101 gcaaatcgct ttaatgggcc tgctagtgat gaatttacgg attggatgct tttgatgagt
     8161 gatcaatttg aaaaatattg tcgttcatat gaaaatgatg attctgtttt agcggttttt
     8221 aatcctttaa ttgttaatgt tccaaatatt atttctaaat aagggagcga cttggcttcg
     8281 acaggagtaa gtctgcttag atggcatgtc gctttgggca aagcgtaaaa agcccaaata
     8341 aaattaaacg caaacaacgt taaattcgct cctgcttacg ctaaagctgc gtaagttcag
     8401 ttgagcctga atttaagtca tactatctag cttaattttc ggtcattttt gatagtgtag
     8461 ccttgcgttt gacaagcgtt gaggtgaaat aaggtcttag ccttgctttt gagttttgga
     8521 agatgagcga agtagggtga agtagtcatc tttgctaagc atgtagaggt ctttgtggga
     8581 ttatttttgg acaggggttc gattcccctc gcttccacca tcacgctaat tttaagtaaa
     8641 tcataagttt atttcaaatt tttagaattt tttatatgaa gttaagaatg atttattacc
     8701 cttaaaattt tgatatattg ggttttataa tttttcatta aaaatttata gttttatttt
     8761 taagcttatt tttagggggg gggtataatt attccttcag tttaaattta ttgaaggaga
     8821 aacttatgaa gaaaaatgct tcgagcaaga tattgctaag cttaggtgta gcaactttgc
     8881 tttattcgag tgcttttgca caagaaatca atcttacaca atcttcagat gtgggaaatt
     8941 attttgaaga aaatggtaag gatatcaatc ttaaaaatcc tgataagtac aaagggcaag
     9001 atttgaatat caaaatgggt gtttgggatt taccaaacga tgattatgat agcgctgatt
     9061 atcgattgaa cattgatatc ggtaaaaaca atactttaag ctttacacac aataatggcc
     9121 aaaatcctgc ttatgtaaca aatctaaacg ctactgctaa agaggttaaa acaacagata
     9181 tagttttaca agcttttgca ccttcggtga ttaatggaaa tttaactatg actagctcag
     9241 gagctggaac cattaccgag gatgaaaaaa aaggttcagg tataattctt tataatggag
     9301 cagttgaagg aaaaagtgct aatggtagct taactataaa tggaaatttt actgccgata
     9361 aaaccctttt tgctacttat ggaaattttg ttaaggtaaa tggaactgca aatcttacaa
     9421 attcaaattt tggacttatg aagcgctctt atacagactt agaagcaaat aatgtagtaa
     9481 tggttcaagc taaagatttc aatgaaaaca ttttaaaagc aaataataac gcaggtgcat
     9541 tacttttaaa attcgcaagt gattatatct caaccgatgt tcaaggcaaa gatcctttgg
     9601 aagcaggaac tataatagat attagcgatg aagataaata cggcgatgga gaaaaaggct
     9661 tagtagatta taaacttagt gttcaaaact gcggtggcaa taaatgctta gtgattaatg
     9721 gaggtgctac tgcagcggct aaagataagc tagttcaact tcaagtagat atagatgcta
     9781 tcgataaatt gcttaaaaat gaatttgatt ctagtcaaga tgaagaatgg acaaaagcca
     9841 aagaagccct tgaaaaacaa aaaactgaac ttgaacaact caaacaagaa gctgagaaaa
     9901 acggtggtaa aatcgatgat gaaaaataca ttgatttagt aaataaaaat tcaaatttaa
     9961 atcttagtgc taatgataaa gcttctatcc tagcacttcg ttctattaca gaacaattag
    10021 gaagtatagg agcagattta gcaagtagag aaggtgtaaa actagcccta caaatcaaaa
    10081 aagacacaga caatacaggt aaatctgtat ctaatctcaa ttcagcttct agtgcagtga
    10141 ataccactat gaatatttct aatgatgttt ctataggttc tcgtgtagca atgctaaaca
    10201 atccttttgg aacttatgct tctaaaatga atggtcttaa atttgctgct ttagatagtg
    10261 atatgagacc aagctatgta aatgaatata ccaatagtgt ttgggctaat gcttttggtg
    10321 gtgctaatat tatcgatgga gatagtggtg caatgtatgg tgctaccgtg ggagtagata
    10381 aacaagctaa tgatgatgtt ttatggggta cttattttac ttatgcaaat gctaaaatca
    10441 aagacaataa tctagaacaa aaaagcgata acttccaatt aggtatgtat tctactatca
    10501 atatagctcc gcaatgggaa cttaatctta aagcttatgc tcaagtttct ccaactaaac
    10561 aagacaatgt tcaagtagat ggtgcatata actcagatta tacaagtaaa ttcttaggac
    10621 ttagtgctaa tgcaggtcgt gtatttgatc ttagtgataa tactttattt attaaacctt
    10681 ttgcgggagt aaattattat tttagttata ctccatctca tacagaaaat ggtgctattg
    10741 ccaaagatat tgattctatg aaaaataatt ctgtaagtgt tgaagtgggt gctgaattta
    10801 gaaaatatat gaatgaaaac tcttatattt ttgtaactcc aaaaatagaa caatttgtta
    10861 tcaatagtgg tgatgattac acagctaacc tagctgtaaa taatgctttc tttactagtg
    10921 tagaagctaa caacaagaaa aaaacatacg gacaaattat cgtagggggt aatgtagatt
    10981 ttacaaatca actcagtatg aatcttggct ttggtgctaa acaaatacta gcaggtaaag
    11041 tagataataa aaatgaaact tacttaagtg gtcaagtagg acttaaatat aaattttaat
    11101 cttaaaaatc atttctaaat ctttttatag tttagaaatg attgtttatt tctatgggaa
    11161 atctcctagg gctttatctt aaagcccttt tttataacaa acaagtaaat aagtctttag
    11221 agtaaaaacc ctaaaaactt ttagttttct ttgaaaagtt tggaagctaa gtgcgttgca
    11281 cgactttgat ctgtatcttt tttaagtgtt ttataaattt tacttacata ttcttctaag
    11341 gtttgttgag aatctatgat tttttcagaa gaaggaattt tttcatactc tccattgttt
    11401 ttaagctcgt aagctaaaac attatcacta agttgcaagc gtaaaaattg agctaattta
    11461 gctttacttc tttcatcata tataggagtc ataagttcta agcgacgctc taaatttctt
    11521 ggcatccaat ctgcactcga tataaaataa tttggctcac tatgtttaaa ataaaatact
    11581 ctagcatgtt ctaagtattt tcctatgatg cttctaacgc gtatgttttt gctgtattct
    11641 tcatcaggtt ttaagcaaca aattccgcgt atgataagat cgatttgcac tccttccata
    11701 cttgcttcat aaagcgcttg tatgatatca ctatccacaa gagaattcat tttagctaca
    11761 atcacacctt catttttctt gcttgtttca atgcgtatca tttctaaaac tttttctttg
    11821 atttgatttg ggctcattga aagagtttga aggcgacgat ttttactaaa gcccgataag
    11881 atgtgaaaaa agcttgtcgt atctcttgca aattctgctt tgcttgtaaa ataactcaca
    11941 tcagtataga ttttagcact gcttgcatta taatttcctg tgcttaaatg catataaaat
    12001 ttaagtttat ctccttgttt gcgtatgact tgagaaacct tagcgtggac tttaaaacct
    12061 gtaatgccat aaataacatg agctccggca ttttctaaag ctttcgccca atgaagatta
    12121 ttttcttcat caaagcgtgc ttttaattct accatcacag ttacttgttt tccatcgctt
    12181 gcagcatcaa ttaaagcttg aactatattg gaattttttt caactctata aagtgtcatt
    12241 cttatggaaa ttacttcagg atctttgctt gcttctttga taaatttata aactggatca
    12301 aaactttcaa aaggttgtat gatgagtata tcttcttttt ctacagcatc aaaaatagat
    12361 aaattctcat caaaaggtgg taaagtttta ggtgtgtaaa gtgggcttaa aagatgcgta
    12421 aaggttttat ttcctgcgat ttgccaaagg ctagggagat tgagtaaaat agaatattca
    12481 taaacatctt tatgaaaaat tttcatgtga gtattaagaa attctacgat ttgttcatct
    12541 gcatcttttt gaatttgtaa tcttacaaaa gctccttttc tgcgaagttt taagccttgt
    12601 tctaaaatca tcataaaatc atcagcttct tcctcttcta ttaccatatc tgcatttcta
    12661 gtcactctaa atgctgctga agctaagagt ttatagcctg gaaaaatttc ttctgcgtgt
    12721 tgatggacta tactttctat aggaacataa atatttgcac ttacttcata aaaacgaggt
    12781 aaaactcttg gaattctaat cattccaaat tttacaagtt caggatgcgc tttatcgcaa
    12841 attttaaccg ctagtgaaaa agataagttg tttaaatgcg gaaaagggtg agtagcatca
    12901 acagctattg gaacaataac aggaaaaata ttggagaaaa aatactcatc acatttttgt
    12961 tttaaatttt catctaaatt ttcataatgt tttatgaaaa gattttcttt ttctaattca
    13021 cttgtgattt cattaaaata acgctccaaa agctcttttt cttgatgtaa gtatttgcgt
    13081 atggctttta attgttgtaa cggggtcatt tcatcgctac tgcttgcatt aactccagct
    13141 gaaaaaagtt gttttaagcc tgcgacgcgt atcatataaa attcatctaa attggtgcaa
    13201 tatatagcta taaattttaa tttttctaac aaaggtaaat ttttagaaca ttggtctaaa
    13261 acacgagaat taaagcgaag ccaagaaagt tcgcgattga taaacatatc aggacttgtt
    13321 tgcattaatt tttccttttt tagttgtatt ttatcattta ttttgaaatt attgaataaa
    13381 agttttaaat ttttaggtta attaagagta aatatatctt taaaattata ttaaattcat
    13441 ctatgttaga atcacaaaat ttatttctgg gaaattctgt gacattgttg tttcattgaa
    13501 gattttaaga aatgataatt ttaaggagga aaattttgaa gaaaacttcg aatcttttta
    13561 ctatttttct tgttttgctt tttgttttct ttgcggttgg cttttatacc ttttataacg
    13621 ctaagggcac atcttattta agcaatgcaa gtgaatcttg taataactgc catattatga
    13681 atgaagttta taacgaatac atggcagggc cgcactctca aaaagtcaaa ggcgaaccaa
    13741 gagcaacttg cgtggattgc catttgccac ataattttgt agctaagtgg atagctaagg
    13801 ctcaaagtgg tttagggcat gcttatgctt ttacttttaa acttgatgag ttgcctacaa
    13861 atttgagtgc gactgaaaaa agcagaaaaa tggtgcaaga aaactgcata cgctgtcatg
    13921 cagattttgc tcaaacagct atcaatgcta caacaaatcc acatgcagac aagtcattaa
    13981 attgtgcttc ttgtcataaa gatgttggac ataaacacgg aatttaataa ggagaagatg
    14041 aatgaaaaaa aatattttac gcttaggtat tgtcgttttg gttttactta tagcgggagt
    14101 tttatggcta aataatgata tcaatcaaaa aaaagaagat gaagcaaata aaaatgccat
    14161 tgcagcaaat gctgattttt ctttgcttag cgatgatgat ccaaattttg aaaaatgggg
    14221 taaggttttt ccagagcaac taaaaatgta tttaacggtt gaaaaagaag agcctaaggc
    14281 tactgaattt ggtggtaatt tagcttattc aaaattgatt cgctttcctc aattaaccat
    14341 actttgggca ggatatcctt ttagccttga tttcaatgaa gaaagagggc atttttgggt
    14401 tcaaatagat caaatgaaaa cagcaagaaa caacaaagat tttcttaatg cccatggact
    14461 tgctgctttt aaaggtcaac ccgcagcttg tatgaattgt catagtggat ggactccatg
    14521 gcttataaaa aatgttgcta aaggagattt tactgctttt aactctacaa attattggac
    14581 tatgattaaa aatatcccag ctgttgatgg tatagtagaa aattcacctg aacatgcagg
    14641 ctcacatggt ggtaaaagaa tgggtgtaac ttgtgcagat tgtcacaatc caaatgatat
    14701 gagtttaaga cttactcgtc cagcagctat taatgcttta gtttctagag gatatgaaaa
    14761 agatccagta caaggcgtaa aagctacaag agaagaaatg agaactttag tttgctctca
    14821 atgccatgtt gaatactatt ttaaaccaac aggggaaaaa gtaaaagtaa tgggtgaaac
    14881 tattgtagat gatagttcta aaaaatggtg gaatggaact cagaaaaatt atgatgagta
    14941 tgaattttgg agagatggca ataaagctaa agagattgaa accgatggta tagttttaac
    15001 ttttccttgg agtgaatgga aaaaaggaca accatttaga attgaaatgc tagatgatta
    15061 ttatgataaa gttcgtggag tatttggagc tgattttact cataaattaa caggagcgca
    15121 aattattaaa attcaacatc cagaaagtga actttatagt ggcggtgtgc atgctgcaaa
    15181 tggggtaagt tgcgtggatt gtcatatgcc ttatgttaga gaaggagcta aaaaggttac
    15241 tcaacacaat atcacttctc ctttaagaga tattaactct gcttgtaagt cttgtcataa
    15301 acaaagcgaa gattatttaa aagctcaagt gcttgacata caaaatagcg ttgcgcatga
    15361 tcaaagaact gcagagtacg caattgttag tttgattatg gatactaaaa aactacgcga
    15421 tgagctaggt aatatggaaa aattccaaag cgatggaaaa gctgatacga aaaaaattag
    15481 tgaagagcta aaagaagttt tagaacttca tcgtaaagct caaatgagag cggattttgt
    15541 taatgctgaa aactcaactg gtttccataa tcctcgcgaa gcttcaagaa tgttattgca
    15601 agctgttgat atggcaagaa tgggacaaac taaacttgta gaaattgcag cggcaaatgg
    15661 aattaaagat tttaaaactt caaatttagg ttttgaagat attcaaaaat ttaatccagg
    15721 agagctttat tataaagtag atgttaataa tcataaagct ggagagcgtt actatgcaga
    15781 tgaaaaagat gttaatggca atcctccaaa agaactttta gagcatgata aagagcttgc
    15841 tccttataat tatcaagtga ttgataaaaa ataattctta agccctataa tcatagggct
    15901 ttttcttttc tttgttttaa aaaatataaa ctttttattt aaaattcact tttgcttcac
    15961 tttgttttgt caaaatatca caaattttga taatcaaaaa ggagttaaaa tgatcaataa
    16021 aaataaattg tttagacagg ttcatatcta tcttagtttg ttctttttgc cttgtgcttt
    16081 gctttttgct ttaacgggta tagcatatat ttttggtatt aatcaagatg tgggcttaaa
    16141 agttgagcaa tatcaattgt caaaagttat agaaagtggt aaagaaagag aagctttaat
    16201 agagtattta aaaacaaatg gtttaaaagt accatctaat acaaatataa ttaaaagcaa
    16261 agataaaggt ataacaatag gtggaactca ttatagtgct aatataactc aaaattctac
    16321 taatgaatac aatattacct taaaaacaag atctttgctt ggagatatga ttatgcttca
    16381 taaagataag ggtgcttggt atttttctgt gcttagcgta ggttttggta ttactttatt
    16441 tatgctttat atttcagggc ttatgattac tttgtttgca aataaaaaag atagaagtaa
    16501 acaatttgca gttcttggag taggggttgt tgtaactttg cttttggctt atcttagcct
    16561 ttgatttttc ctagcttttt aagctaggta ttatttattt ttttgtataa tcacacttta
    16621 ctttattgga cagatgggtg agcggctgaa accacacccc tgctaagggt gcagatctta
    16681 acgggtctcg agggttcaaa tccctctctg tccgccacta aaactttctt gaaaattcca
    16741 agtatttata tatcaacatt atatatttga aaaaaaagaa taatctagaa ctataataaa
    16801 taaatattat tctaaaattg gaaaataatc cattagaaaa taagatattt tggaattatt
    16861 taagaaatta gatgaaaaag aatgctaata tggaagtaag aattctaaaa aaataaaata
    16921 taaaatcaat cccaaagatt acttttatat atgcctaaaa tcacaatttc atttttactt
    16981 ttatcgataa gataagggat aatataacct ttaaaaatca aatctcttat attttcatta
    17041 tcaaaagaca aagattttct atttttataa ggcataaaag aaagattttt acaaattgaa
    17101 ttaatatcat taagaaattc tttagcataa aaagaactat ctaattttat aaaattaaca
    17161 atatgcctaa gctcattttt aaatttagga gttggaacaa ttttcattta ttctaaatct
    17221 tttctaatat cattaaaagt ttcatcaaaa tctaaagtct ttaatttatc ttgcttgtaa
    17281 agttctatat cctttttata accatcaatt cttattttat gttctaaata acttaaagca
    17341 agttctaaaa cttctttttc acttaaattg ttatctttac aataattggt taaaaaatgt
    17401 tgagtttctt ttgaaaattc taagttcatt tgttactcct ttttaaagat ttattataac
    17461 ataaaaacat tttttattta aaaaaagggt tcaaatccct ctctgttcgc cactaaaact
    17521 ttcttgaaaa tcccaaatat tttattaagt attaaagcaa gagactagcc cttgcgaagt
    17581 tatattattt tacagcgttt ttgatttcta aaatcatagt ttttaaagac tctagtccat
    17641 ttccacttgc taaataccag tattctggat caagatagat gatttttttg ttttgtgctg
    17701 ctttggtttt agcgacaagc gcattatcga gtatgccttg agcccgttct ttgttgccta
    17761 caatgatatt tctatcaata acaaaaatat aatcaggatt tttttctaat ataaattcag
    17821 aattgatact tttaccgtga gtgcctactt ttatattctc atctaccgcg ttaatcccta
    17881 aaacgtcgtg aataatccca aagcgagatt gagggccaaa ggctgaaatt ttgttagaat
    17941 ttgtaagaat aataagagct tttttatctt catcaactat gcttttggct ttttcaattt
    18001 catttttaat atctgaaatt ttttccaaag cttctttttc taaaccataa agttttgcaa
    18061 cgcttaagac attgttttca aaagagctta aaaaatttgc attatcaaga cctacaaata
    18121 aagttggagc tatttctttt aatttgtcat aaaatttact ttggcgtcca gaaatgatga
    18181 taagatcagg ttttaaagca ttaatggctt caaaatcaac ttgttgtact ccacctacac
    18241 taggtttgtt tttaaattgt tgtaggtatt ttggtaaatt tttagcagga acgcccgcga
    18301 ctttatcgtt taattttaaa gcatcaaaag tatctaaaat tccaagatct aagatcacta
    18361 ccttagaagg atttttaggg attttatttt ctcctaggct atccttcact aaaaaactat
    18421 caccctcatc actcatgcta ataggcaaaa ctttcatcgt agcagtgttg gtttttgttg
    18481 tagaacttgc gttgttttca tttgaatttg aattacaagc tgttaagatt agacttaaaa
    18541 aaaatgcaaa aaatgcaaaa actaaagatt ttttcatatt ttctcctttt taaaaataaa
    18601 tacaaatttt cttaccatca atttgactta caggtatatc catatcataa atttgtttta
    18661 aattttcttg attgatgatt tcatcttttg agccttgttt taaaagcttc ccatctttta
    18721 aggctatgat ttcatcagaa taaatcgaag caaaattaat atcatgtaat acaacagcta
    18781 tacttttgtt aaagtctttg actaaatttt tcattagttg catgatttgt acactatgct
    18841 tcatatcaag attgtttaaa ggttcatcaa acattataaa ttcagtatct tgagcgatga
    18901 tcatggctat aaaagctctt tgtttttgtc cgccgcttaa tgtatctaaa aattcatttc
    18961 ttaagttgct aagccccatg tattctaaag cttcattgat tttgatttta tcgtttgcat
    19021 taagtcttcc ttgagaatgt ggaaaacgcc caaaagcgac taattcttca acttttaatc
    19081 ttaaattgat attgttttgt tgtttgagaa tggaaatttt ttgtgctaag atttgctctt
    19141 tatagtcttt taatttcatt ccatcgatat aaatttctcc actactaggt tttattaaac
    19201 gacttgctag agctaaaaga gtggattttc cagcgccatt ggctcctatt atagaagtga
    19261 ttttgccttt atgaaaatca aggctaagat ctgaaataat ggctttatta tcataaaatt
    19321 tggtgatatt ttttagttta atcataattt attacccttt aatacaagat agataaaata
    19381 tatcccacct aagaaattaa taactacgct tatagtggca ttataatcaa aaactctaga
    19441 gacaaaaaat acccctccaa gtaaagctaa aatgctaatg agtatgcaag cgcttagtaa
    19501 aatactatgc tttgcagttt taaatagctc ataagtgata tttgccacca aaagccccaa
    19561 aaaggttata ggacctacaa gtgcagtgct aatagaagtt aaaatagcta tgataatcat
    19621 caattgtttt gaaatttttt gataatttat ccctaaattt atcgctaaat ctttgcctaa
    19681 atttaaagga tctaaaaatt tcatatagcg aaaaatccat ataaaactta aaaagctaat
    19741 gatataagca agaattaaaa tatcaaaagc aatattatca aaactagcaa acattcttcc
    19801 ttgtattacc atgaattcat caggatcgat taatacttca aaaaaagagc ttaaagtgct
    19861 aaaaagtgtt ccaaaaacta agcctaaaag cattataaga taaatacttc tatcgctact
    19921 aaataaaatt ttataaagtc ctagtgaaaa aaccaccata caaactagag tgattaaaaa
    19981 attgatatcg tttttataaa cacttaaatt agctgcacca aaagaaaaga taagagcact
    20041 ttgaagtaac atatataaag aatctaatcc tatgatagca ggggttagaa ttttgttgtt
    20101 gcataaagtt tgaaaaatca ctgttgaaac agcgatgcaa atagctacta taataatagc
    20161 tgcaatttgt aaaaaacgac tttttaaggc atactcatca aagccattta aacccacaag
    20221 tataaaaatc cctatcatac caagtgttaa aaagctcaaa attagcattt ttttacgcat
    20281 aaactttcct ttttagcaaa agaaagataa agattaaaga tcctaaaaca cctgtagtga
    20341 tacttaaagg catttcaaaa ggaaagatga caagtcttga aatgatatcg caaacaagta
    20401 aaaacaaagc tccacaaagt gctatataga taagattttt tctaagatta tcacctagat
    20461 aaagagctac taaatttggg ataattagcc ctaaaaaagg gataatccca acgcttacaa
    20521 tcactaaact agtgataatg cttacaatca tcaagcctaa aaataatata ccattataag
    20581 aaattccaag atttaaagct acatcttcgc ccatgccaac tatggtaatt ttatgagcta
    20641 aaaaataagc aagtataaaa agtggtaaag aaatgtagag caattcataa tttccctgca
    20701 taacatttgc catactgcct tgtagccaac cttggatatt ttgtatataa tttaaagcat
    20761 aggcaaaaaa agtggttata gcactaataa tacctccaaa catcaagcct atcaaaggta
    20821 caaaaatcac atctttgagt ttgatttttc ttaaaatttg gataaatata aaagaaccca
    20881 aaagtgcaaa tatagaagca atgatagctt gagtgaaaaa agacgctcca gcaaaaaata
    20941 ttaaagaaat aagtatgcca aatttagcac aatccatggt ccctgctgta gttggggaaa
    21001 cgaatttatt ttgcgtgagt tgttgcatga taagcccaca tatactaaga ctcattcctg
    21061 tgagtaaaat tgctataagt ctaggaattc ttgtgagagt tatgatttct agttgagtgg
    21121 agttaagatt aagaatatct tttacattga tactgataac tcctataaat aaacttatca
    21181 ttccaaaaaa taaaagtaaa gctataagca cttttaaact caatatatgc ttaaaaaaca
    21241 aatctttcct tatagtaata ataattatca aaaatgaaat tgtaatgaaa tttgttttaa
    21301 gaaatgataa aactacaaag gatattttag taagaaatca aaaatccagt ggaaagtctt
    21361 tgcaagtgtt tgttatagtc tataaggctt tctccatagc cattaaagta ttgtaaatac
    21421 caataaattc cgttattaaa aatatcatat cctagatcaa cctgtatagc acctttgtta
    21481 tcgtggaatt taagattatt tcttagcata agattgataa aataatcatc gcccaaatac
    21541 gctaaattca catcaaaaat tcccatataa tgcaagatag caggattatc atcatctttt
    21601 ttgctttcag gaattctata ccaaaggcgt ggaacaaata aaaatttatt atataaaata
    21661 gccgtagata cataaattct attccatgag cgagattgta aattctcatc tcccttgcca
    21721 ttgctttcat gcaatatacc tacgcgtaga ttgttaaaaa attcataatc tttaagatac
    21781 aaaggaaaat ctataaaaaa ttctggttga tagttggttt ctctaaaagg agaagaatgc
    21841 tcataaattt gccaccaaga agtttgagta taggctatat aatatttttc atctagccct
    21901 agtaaatttt caaaaagtct ttttttaaca ctaagttgga atttcgcctc actcttatta
    21961 ttatttactc ctaaagaatt aaaactataa gcaaaaggta aaaaataatt catcttataa
    22021 gagctaatgc caaggggatt aaagctttca ttttcaccaa gataattagc caaagctaag
    22081 cgagaaaagt cttgtttttc ttcttttttt atagtgatag aattttgcgt ttgtgttgct
    22141 ttgcttgagt tattttgttc ttgagaaatc aaaacagatg aattttttaa agcgagtttt
    22201 ttgtaaattt ccatagcttt tttataatcg ccttgttttt catactctaa agcttgttgt
    22261 aaatcactag cccatataaa aacgcataag cttaaaaata aagcaatttt tctcatttta
    22321 actcgctttt aaatttttca tattcttcat aaaaattaag atttaaaaaa gcatcttcat
    22381 cttcaaattc tacaaatttg gttttaatct cagaaaataa aagtcctatt ttttgttcat
    22441 ttttttctaa gaaattttta caagtttgag ctaaagagct gtgataaaag ccacataagg
    22501 gatgtgtatg taaaggggtt ttggctatga ttattttata gttttgttct aaaaaaggaa
    22561 gcatttttaa aagctcattt tcacctactt taggactatc tacacttaaa acaaaaacaa
    22621 attcattttt aaaatttgaa agtatagagt aaagcgcaag cataggagag taaacttcaa
    22681 attctaaaga atcttttatc aagctaaaat ggttttcaaa tttgtcttct ttcgcactca
    22741 catagacatt tttaaaaatt ttagaaaatt tctctacttg aaattgagtt aaattttgat
    22801 ttttaagaat caatttgctt ttatcttgtc ccatacgact agatttgcca ccacataaaa
    22861 tcacgcaatt tagctcatta agctgcacaa atttcctttt ttaatgtaat tctaccacaa
    22921 attcgccaaa atattttata atttctttta tgaaatacac agaactttta caattgcaaa
    22981 cttttttttc tcagtttaaa aaaatcgatt ttatcaagcg tatcaatgac aatattttgg
    23041 aattaagctt tgatagaaaa agatttattt ttgatcttac tcgtgcaatg agtgcgattt
    23101 atacagctaa atttaatgca aaaaattata atgcaccttt tgattttatg cttaaaaagt
    23161 attttagcaa tgcttttata aaggaagtta aagtccttga aggcaatcgt attttatgtt
    23221 ttagcgtaaa agctaataag gcttataaaa gctatgagag caagatttat tttgaattta
    23281 cgggtaaaaa taccaatgtt attcttacag ataaaaaaaa tttgatcata gaggctttaa
    23341 ggcatattga taaaagttat cgtgttgtaa aacctaatgt gattttagag cctttaaagc
    23401 cttataaaat ggatgaaaat tttgaggaaa tcaaagactt tgcagattat ttttctcgca
    23461 aatttacaag catttatgag agtaaaatca aacaaataaa aaatttaaaa cttgcacaag
    23521 tagataaaaa aatacaaaat ttacaagaac ttttttctag tctagatgaa gaaaattctt
    23581 tactcttaaa agctttagaa tacagaaaaa gggctgatgt attgtttgca aatttgagtg
    23641 ttttaaaaga ttatgaaagg gaatttaagc ttgatgattt tgaaggcaaa gagcttgaat
    23701 ttaagcttga atttagtcct aagcaaagtg ctaatttata ttataaaaat gccaaaaaat
    23761 tagaacaaaa agctaaaaat ttaaacatac aaaggcaaaa tttaaaagaa aagttagatt
    23821 ttaccttgag tttgaaagaa ttattgcttc aagctaagag tgagatagag cttgaaattt
    23881 tactacctaa aaaaaatagc aaaaaaaatc aagattataa acaagaagat cttgtggcaa
    23941 atttttatta caatgagttt aaaatttgtg tgggtaaaaa tgaaaaaggc aatgaatttt
    24001 tacttaaaaa tgctaaaaaa gatgatttgt ggcttcatgt aagggatatt cctagcgcac
    24061 atactttgat tgtatcaaac aagcaaaaaa tcagcctcga tgtgatagaa tttgctgcaa
    24121 ggctttgtgt aagcttttct aagttaaaga aaggttcgta ttgggtcgat tataccttaa
    24181 aaaattttgt taaggttcag caaaaggcgt ttgtaaatta tacaaatttt aaaagtatta
    24241 atatcacaaa ggattaaaat gccagttagc cctttaggaa atatcaatta tataaatcag
    24301 aatatggctt atccagctac acaagcaagc aatgagcttg caaaagaagg ttttgcagct
    24361 acgctaaata tggctgaatt taatgaaaaa gaaaaaactt taaacaagct tgaaaaagtc
    24421 aatgagactc atgaaatcaa agaagagatc aaagaaaaag ccgaacaaga agaaaaaaag
    24481 aaaaaacaca atcaagaagc taaaaccagc gataatgaga aaaatgaaga agatgagtct
    24541 aaagatccaa attttaaaga cgcacaaagc attcatcgcc tagatattag tatataagga
    24601 aaaatatgtt taatacaact agaattattt cagctcttgt gatgataggg gctattatta
    24661 ttatcgcgtt gattgatcaa ttttttatca attttatcgt ttttgcggtt ttattgtatt
    24721 tatcttttag tgaagcaaaa aaactttttg ctttagaaaa tatttctatt atccctttgg
    24781 ctatagcttt tattttggga agtttatcgc ataaagcttt gctttttggg attttagctt
    24841 tgttattagt cgttggatat ttggtttata aaaaggcttc cttaaaacca gctcttattt
    24901 atatttatcc tagtttgcct attttagcac tttggcaagt gtatttagat cagggtatgt
    24961 ttgcgctttt ttggcttatc attatcgttg cagcttgcga tagtggggcg tattttatcg
    25021 gaaaacttat gggtaaaact cctttttctc caacaagtcc aaacaaaacc ttagaaggtg
    25081 ttataggtgg cttgatttgt gcgagtgtta ttggaactat tttgggaatt tttgtttata
    25141 gtttttggct ttctttactt tgttcgtttt ttgtagcgat ttttgcagtg attggagatt
    25201 tgtttgagag ttattttaaa agagaagcag gtgtaaaaga tagtggagat cttatccctg
    25261 gtcatggggg cgtgctcgat agaatcgatg cagtgatcat tgctgctttt gtgatggtta
    25321 cttttttatg atactttttg gaagcacggg cagcatagga ataaacactc ttaaacttgc
    25381 tgctttaaaa aacattcgta tttctgcttt agcttgtggg gataatatcg ctcttttaaa
    25441 tgaacaaatc gcaaggttta aacctaaatt tgttgccata aaagattcaa aaaataagca
    25501 tttagttaaa cacgatagag tttttatagg gcaagaaggt ttagagcaaa ttttaacaga
    25561 atgtcaagat aagcttttac tcaatgccat tgtaggtttt gcaggactta aaagcacttt
    25621 aaaggctaaa gagcttggca aaaacatagc tttagctaac aaagaaagtc ttgtagtagc
    25681 tgggagtttt ttgaaaggcg ctaaattttt acccgttgat agtgagcatg cagctttaaa
    25741 atttttactc gaaggtaaaa aaaatatagc aaaactttat atcacagcaa gcggcggagc
    25801 tttttataag tataaaatca aagatttaaa tcaagtcagt ctcaaagatg ctttaaaaca
    25861 tcctaattgg aacatgggag caaagatcac tatagatagt gcgactatgg caaataagct
    25921 ttttgagatt atagaggctt atcatttata tgattttaaa gaaattgatg ctttaataga
    25981 accaagatct ttagtgcatg caatgtgtga atttaaaaat ggagctagca cggcgtattt
    26041 ttcaaaagca gatatgaaac tagctatttc agatgctata tttgaaaaac aagatacgcc
    26101 tattttagag gctgttgatt ttagtaaaat gcctgcttta aaatttcatc caatcagcac
    26161 aaaaaaatat cctattttta agcttaaaaa tacattttta aaagagccaa atttaggtgt
    26221 tatcatcaat gctgctaatg aagttggtgt ttataatttt ttagaaaata aaagtggatt
    26281 tttagacatt gctaaatgca tttttaaagc ccttgatcat tttggagtac ctaaaatttc
    26341 aagcatagaa gaagtttttg agtatgattt taaaacaaga gagtatttaa ggagttaaaa
    26401 tgaaattttt tttaacaatt ttatttttta taacaagcat ttttgcttta gagctagact
    26461 ttagcgtagg agaaaatgga aaaagtctag atgataataa tacagtttta atttttggtg
    26521 gaattcaagg cgatgagcct ggtggatttc atgcggcaag tttgcttttg agtgattata
    26581 atatcactaa gggtaagatt atagtggctc caaatttagc ttttgatagc attatcaagc
    26641 gttctcgtgg gaataatggg gatttaaacc gtaaatttgc aaacattagc ccaaaagatc
    26701 ctgattataa aaccgttcaa cgcattaaag agcttatttt acttcctgaa gttagtatgg
    26761 tgatcaatct tcacgatggt tggggttttt ataaacccac ttatatcgat gcgatgcaaa
    26821 atcctaagcg ttggggaaat tcaagcgtga ttgatacaag cgaaatcaat gcaagcaaat
    26881 accctgatct tgaaaatatc gccactcaaa ccgtaaatag tgtcaattct tcgcttgctg
    26941 atccaaagca tgcttatcat cttaaaaaca ccaaaaccca agagcttggc gatacggaaa
    27001 tgcttaaagc tttaacttat tttgtgattt caaatcacaa agccgctttt gcaaatgaag
    27061 caagtaaaaa tctgcctgta aatttaagag cttattatca tcttttggca attgaaaatt
    27121 atttaaaaac tgcaggaatt gaatttagca gagatttcga actcactccg caaggagttg
    27181 ataaagccat aaataaagag cttgaagtaa aactttttga tgatagaatt ttactttctt
    27241 taaaaaatcc aagaaaggtt atcaactatg tgccttttcc ggtaaataaa gagttaaatt
    27301 ataacacaag caatgaactt acggctgtta tcgcagaagg aaattctttt tatatccagt
    27361 atggcaatcg ttttcaaaca agattatatc ctgagtattt agaatttagc gatgctttta
    27421 atgaagtaac ttttcaagtt gatggcaatg aaaccacagt tccttttgga accaaggtaa
    27481 aagtaaaaga gaattttctt attccaaaga tagctaatgt gcgcgtaaat atcataggtt
    27541 ttgatcatgg aaaagatgaa agtggtattt tagttcataa aaaaaatatg caaacacaat
    27601 actctttaga catggcaggt aaaatttata gagtggaatt ttatgagtta agaggggcga
    27661 atttacaaca acttttagag gcaaatatca atagcaagtt gatcaaaaac gctaaaaatt
    27721 tggatttaaa tactcttaaa atggcaagat caaaagataa attcttaggt tctattttag
    27781 tggaatttga atgaaaaatc ttatcctagc tatagaaagt tcttgtgatg atagttctat
    27841 agctatcatt gataaaaata ccttagaatg taaatttcat aaaaaaattt cccaagaatt
    27901 agatcatagc atctatgggg gagtggtacc tgaacttgct gcaagacttc atatcgaggc
    27961 tttgccaaag atacttaagc aatgcaaaga gcattttaaa aatctttgtg ccatagctgt
    28021 gacaaatgaa cctgggctta gcgtttcttt gctcagtgga atttctatgg caaaaacctt
    28081 agcaagtgct ctaaatttac ccttaatccc tataaatcat cttaaaggtc atatttatag
    28141 tcttttttta gaagaaaaaa tttctttaga tatgggaatt ttacttgtta gtggtgggca
    28201 tactatggtg ctttatctta aagatgatgc aaacttagag cttttagcaa gtacaaatga
    28261 tgatagcttt ggagaaagtt ttgataaagt ggctaaaatg atgaatttag gttatcctgg
    28321 tggggtcatc atagaaaatt tagcaaaaaa cgccaaactt aaaaatatct cttttaacat
    28381 acctttaaag cattctaaag aactcgctta tagtttttca ggacttaaaa atgcagtgcg
    28441 tttggaaatt ttaaagcatg aaaatttaag cgatgatata aaagcagaaa tagcttatgc
    28501 ctttgaaaat acagcttgtg atcatatcat ggataaatta gaaaaaattt ttaatcttta
    28561 taaatttaaa aattttggcg ttgtaggagg agctagtgca aatcttaact tgcgttcgcg
    28621 tttgcaaaat ttatgtcaaa aatataatgc aaatttaaaa ctagctcctt taaaattctg
    28681 ctctgataat gctttgatga tagcaagagc tgcggttgat gcttatgaaa aaaaggaatt
    28741 tgtaagcata gaagaagata ttttaagccc taaaaataaa aatttttcaa ggatatagat
    28801 gaaaaaagct tttactatat tagaacttgt ttttgtgatt gttattttag gaattttagc
    28861 cgctattgct ttaccaaaaa tgagttcaag caaggatgaa gctgaagtta gtaagtcttt
    28921 aaacaacctt aaaactttga ttaatgatat aagcatttat actttaaaaa atgatcattt
    28981 aagctctata aaaacgatga gtaatgtaag tggggttgaa aatgtcgatc ttggcaattt
    29041 taatggcaca aaagaagtaa attttcgcgt aggcgatgat aaagaatgct taaaacttgt
    29101 ttttataaat aaagctgatt ttatactcat gggaatttca agcaatgaag caagtaaaaa
    29161 tgctatcatt aacgcagcca atcaaagcca tgaagattta gaaaatatag accttacaag
    29221 ctcttctagt aataaagctt gcgtgatctt aagtaagaat gaaaatttta aaaacctagc
    29281 gagtaaaact tatcttttaa tagggggaat gtaatgatag tgagtaaaac ttatgagatt
    29341 gactcttgtg atgatgtaga acttgatata aaaagagaat caaagcttga atttaagctt
    29401 tgttttgatg atgaaaaaga aataaaagct ttagtgttta tcatccctgg gcttggtgga
    29461 gatgtggatg aaaattaccg tgaacactta gctgaatttg tagcaggcga atttaatgtg
    29521 gctgtagtaa gtgtgaatta tcattgtata ggtaatcgcc cgcaaactgg atcaagcttt
    29581 tttatggatg atatagacaa acttatttta aaaacaagtt gtgaagcttt aaatatacaa
    29641 gttaatttag ataagttaaa ttctttagaa gaattaagct caacactcaa agaagttgat
    29701 cacatcttag aagaacaaaa aaaccaaaaa ttaattaatc caaattttaa attaagcatt
    29761 catctaagtt tgcaaccaac aaaaaacgaa tatcaaaatt ttggagtaat gcaggcgcaa
    29821 gatttgttaa atgcagctct ttatcttaag gctcatgcac cttttgatac tatggggggg
    29881 ggtatacccg ttatcatgat aggtagttct catggaggat atttggctca tttagcagct
    29941 aaatttgcac cttggcttat aaatggagtg atagataatt ctagttatgc taagtttctt
    30001 tggcgtctta taggttttgg caaggaaatt gattttacaa aatactattg ttttggaacg
    30061 ggtatctttt ttaaacatat ccatatttat tgttcagata aaactttttg gacgagcaat
    30121 tcgagctcaa ataacttttt ttccatacca aggagaatga taagatatat attagagcta
    30181 aatcatatag aaaatcaagc aaattatcca aaaccttatt atgtaagcta ccattctttt
    30241 tatgataagg aaatagctcc acctgatgag aaattagaac tttataaata tttaaaacaa
    30301 tttgattttg atgccgagct tcatatgata aaaaatccag atcaaattga tggtaaattt
    30361 atcaaaagtt tagatcatgg tatgggaatg tctataaaaa ctttgatttc caaagaactt
    30421 ccttgtatac ttgaaaaagt tttatctgaa tctgattcta aaaaagaatg gaaaaacaaa
    30481 agcataagct acccttgtga tggcttggtg tatcgtttta gtgaaaaaaa caataaaatc
    30541 aatttagata tcacagagac ttaaggaaat ccgcatgacc atactagaaa aaaacataca
    30601 agctttatta agtggggtaa atgaaccctt aggaaataaa cttttaaatt tcatacaaaa
    30661 taaaacttgc tctcgtttta atatagatga aaatttaaat atctatgata aaactcataa
    30721 tgtttttatg tatgaaaatt tagaagaaga aataaatttt ttctatcaaa gtattttaga
    30781 aaaaactcat agatatcctt ttgcatgtat ttatggtata ggcaatgctt tacttattaa
    30841 aaatttatcc aaacactata aacatctttt tatatttga
//
LOCUS       DAPWGO010000010        30404 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.010, whole genome shotgun sequence.
ACCESSION   DAPWGO010000010 DAPWGO010000000
VERSION     DAPWGO010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 30404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30404
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.010"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(78..1115)
                     /locus_tag="RJ336_000413"
     CDS             complement(78..1115)
                     /locus_tag="RJ336_000413"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005021248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II asparaginase"
                     /protein_id="HDZ5212884.1"
                     /translation="MKKLFICCLFIGVCMKKAKSRIAILGTGGTIAGFIDSTIATTGY
                     TAGAIDIDVLIKAVPQIRDLADISWEQIANIDSSNMCDEIWLRLAKKIAKLFAEGIDG
                     VVITHGTDTMEETAYFLNLTIKSDKPVVLVGAMRPSTAISADGPKNLYNAVALVANKE
                     AKNKGVMVAINDKILSARGVVKTHSLNVDAFSSPDFGDLGYIVDGKVFFYNNVTKAHT
                     KNAPFDVSKLTSLPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGSIHKNQKD
                     VLKELLKKGLKVVVSSRVVAGCVAVSDSDEKLGFISAEDLNPQKARVLLILALTKTSD
                     PKKIQEYFLKY"
     gene            complement(1169..2740)
                     /gene="recJ"
                     /locus_tag="RJ336_000414"
     CDS             complement(1169..2740)
                     /gene="recJ"
                     /locus_tag="RJ336_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDZ5212885.1"
                     /translation="MKIINKNEIKKILASRFEKDLHTKLCDLPLPCCLKDAYKAANRI
                     KEAVEKNEKVAIVGDYDVDGIISCVIMAEFFDDIGFDYIIRIPNRFKDGYGLNAEIIN
                     ELDVNLIITVDNGIAALEAAKLCKEKNIDLIITDHHMPQDVLPDAFAIINPKQKDCDF
                     PEIEICGAQVAWYLIAALKEVCKLKYDMCKFLELLAIAIVADMMELRDLNRALVRRGI
                     DHINKSKRAAFRAIKHYYQKDKFALDNIGFLIAPLINSAGRMDDASISYEFLHTKDFN
                     KALEYLEQIVSFNESRKDEEKQLFEDSLNQIDENDSCIVVSGLNWHEGVLGIVASRLA
                     KHFNKPAFVFSQNEEHLKGSARSVGKIDILALISKTNSILSNYGGHKGAAGISLNSEN
                     FEQFKNKIKKECSQISESEFLDTDEILGILEPSEIDFEMLEILESFEPFGHKNPRPFF
                     VLENLCVKNKKLLGKDEKHLKLVLTKENKTIEALFFNFDKEPELNQNISLLGSISKNE
                     FRGMVTPQFVVKEIL"
     gene            complement(2727..4358)
                     /locus_tag="RJ336_000415"
     CDS             complement(2727..4358)
                     /locus_tag="RJ336_000415"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HDZ5212886.1"
                     /translation="MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKADP
                     YINVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYQSVIE
                     KERRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRA
                     LRLEVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALD
                     RDLKDKIAISCGVEKNCVIESVDAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMEN
                     WDSLVKRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAALDTKVELKWVDSEKL
                     ENMESSEVFKDVSGILVAGGFGYRGVEGKIKAIQYTRENKIPFLGICLGMQLALVEFA
                     RNVLKLKDANSSEFNEKCQNPVVYLIDEFMDTNGEKQIRTAKTPLGGTMRLGAYKCDI
                     KEKSLLAKVYNEVKSVKERHRHRYEANPKYRADFEKHGLIVSGESKGLIEAVELNCHP
                     FFLAVQFHPEFTSRLEHVNPVICSFIKAAINYEDN"
     gene            4478..5101
                     /locus_tag="RJ336_000416"
     CDS             4478..5101
                     /locus_tag="RJ336_000416"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HDZ5212887.1"
                     /translation="MQITLLFHTPLSVCSHATRTCWQSFEKGDCGGEKDKELIDRVGN
                     KFKHASTLEHLNYTFYIQGISRACLQEVARHRHTSPSVKSTRYTLKELRNEAEFKIGD
                     FENASRYLVLCGNEEVDNASIKALENLRTILQKSISLDIAKYCLPESYKTELTLTINA
                     RSLQNFISLRSSKSALWEIRNLANALFEALPQEHKFIFEHCLHKDIE"
     gene            5221..6606
                     /locus_tag="RJ336_000417"
     CDS             5221..6606
                     /locus_tag="RJ336_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HDZ5212888.1"
                     /translation="MDKQFFQDFLMLSQAHTIATLAILCVVFYALKKMRDIKINFSLR
                     MLFALLMGLGFGFALQYLANFPDAEEASNILWYSETKHWFAFVSSVFVAFIKMLVVPL
                     VSICIIKVIIEIDKNIKISSLLGISLFWILFSTAIAATLGIFLGYSFDLGSNFAIYEG
                     NKQIREIQTFSNIILGLIPSNIIAAINKENIIAIVIFSFFIGISAKKISKKEEYEQAF
                     KSFHNFILTFYNIMMNMTATVIRFMPYAVVCMMANVLLSNGFEAIKTAGLFIMLIYIA
                     MLIMFGVHFLLLASQGLNPIKYAKKAFPVWLFAFSSRSSLGTLPMTTSTLQNKFGVNS
                     AIANFVASIGTTTGLNGCAGYFPALAAVFVAFATHTHIDFTFALMIVLVAVIGSLGIA
                     GVPGSATMAASIMLAGIGFGNNFVMLSLILAIDPIIDMARTASNVSGAMTSALCTAKN
                     LKALDKEIYNS"
     gene            complement(6645..9014)
                     /locus_tag="RJ336_000418"
     CDS             complement(6645..9014)
                     /locus_tag="RJ336_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDZ5212889.1"
                     /translation="MKVIKRNGRTEELDVSKIKKCTSDAVKDLEGVNLSELELDAKIQ
                     FRDGISTEEIQKTLIKTAVDKIDIDCPNWTFVAARLFLFDLYKKVNGMNRYNHLCEYF
                     EKGEKEGRILLGLKEKYDLDDLNAYIKPERDMQFTYLGIKTLYDRYLIKDSKGMPIEL
                     PQQMFMAIAMFLAQNEFNPQEWAKKFYDLISKFELMLATPTLSNARTTRHQLSSCYIG
                     STPDNIEGIFDSYQEMALLSKFGGGIGWDWSKVRAMGGSIDGHKNAAGGIIPFLKITN
                     DIAVAVDQLGTRKGAIAVYIEPWHMDISDFIDLRKNSGEERRRAHELFPALWINDLFM
                     KRVRANDKWTLFDPADTADLCDLYGEAFEKRYEEYEKDESITKEIVEAKELWKKILLN
                     YFETGLPFLCFKDSANRANPNAHVGIIRSSNLCTEIFQNTEPNYYQIKVVFENGDELH
                     FDEEQKVVIDRGYEKPAKKISTLDSIDGNKVYIVEKYKNDGKTAVCNLASINLSKVYT
                     KEDIERVVPTAIRMLDNVIDLNFYPHRKVKDTNLKSRAIGLGVMGEAQMLAEAKIYWG
                     SDEHLNKIDEIMEQISFEAINASSNLALEKGSYEDFEGSNWSKGIFPIDVASPKAKAL
                     TLREGLFDQSECDWVKLREKVKKDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKW
                     FEQNLSGMIPVVVPNLSLDTWQYYTPAYELDQKILVKAAAVRGKWIDQGQSLNIFLSL
                     DKASGGYLNEIYQLAWELGVKSTYYLRSESPDSEKVNVADRSIECEGCQ"
     gene            complement(9030..10358)
                     /locus_tag="RJ336_000419"
     CDS             complement(9030..10358)
                     /locus_tag="RJ336_000419"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDZ5212890.1"
                     /translation="MVERYSREIMAKKWDMQAKYDAWLKVELAAVKAWNKLGLINDTD
                     CEKILKNAKFDIARIDEIEKTTKHDVIAFLTSVSESLGEESRFVHYAMTSSDCIDTAV
                     ALQIKESLELILEDVSLLLEVIKKRALEHKNTLMVGRSHGIHGEPITFGLVLAIWYDE
                     ILHAKELLEHAKEVISYGKISGAMGNFAHAPLEFEEEVCKNLGLKAAPVSNQVIQRDR
                     YAQVISAIAILASSCEQIAVAIRHFQRTEVYEAEEYFSVGQKGSSAMPHKRNPVLSEN
                     ITGLCRVLRSFVTPALENVALWHERDISHSSVERFILPDAFITADFMLMRLTNLIDKL
                     LVYPENMMKNLNLTGGLVFSGRVLLELPFKGISREEAYKIVQRNAMKVWADLQNGKAA
                     INEKNESLFLLALLSDEDLRKSLSEEDVRKCFDYNYYTKNVDAIFKRTFK"
     gene            10436..11338
                     /locus_tag="RJ336_000420"
     CDS             10436..11338
                     /locus_tag="RJ336_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDZ5212891.1"
                     /translation="MAYIKIKLSNNGKKAFQVLMENLKISINEAQKLIDKKRLFCDGI
                     LVEEKNEILNGLVELIVYENNPKGVEIVFENEDFAILEKESGILSHPNGRHCKYSLSD
                     EIWHLWGKEACVAHRLDKETSGLILVAKNKKAQIDLKTLFEKKLVQKEYLALANGKIE
                     ENFIIDKAINLAKNYDDVKTRMQICKEGKQAITEFEILEYFPKINATLLLCKPLTGRQ
                     HQIRVHLHYKNHTILGDPLYGLSKEQIESILDEKLTPKERLKLTGALRLCLHSYRLKF
                     QYKNQNFNINSKINIKEIFNNSIK"
     gene            11451..12329
                     /locus_tag="RJ336_000421"
     CDS             11451..12329
                     /locus_tag="RJ336_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HDZ5212892.1"
                     /translation="MKFVNFIQGQKPNLGVLNSSGKIVSFDDLGIETNDMNEFIIHFD
                     KFKHKLTDLDSKIAYEIPQENYLAPIIEPRQDIICLGINFLDHAKESAKFKGEKFEER
                     EYPVYFGKRCNQATPPFGDIPLHADVTSQLDYECELAFILSKDAYKIKAKDAKDYIFG
                     YTIINEISARELQKRHKQFYRAKSLEGSTIMGPYITSVDEISYPPKLQLQSYVNDELR
                     QNSNTQLFIFDIAYVLEELSAGMLLKAGSIISMGTPSGVGMGLNPPTFLKSGDKVRCV
                     IENLGELCNKIKNINY"
     gene            12393..13307
                     /locus_tag="RJ336_000422"
     CDS             12393..13307
                     /locus_tag="RJ336_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HDZ5212893.1"
                     /translation="MKKIIMILCLSYANIVFAVDMITPIPNSISYDKEKAKLGKSLYM
                     DKSLSKDGKVSCNTCHRLDQHGVDGLEFSIGVDNQLDKPFNTPTTFNSVFNFVQFWNG
                     RAKDLAEQATVPFFNPKEMGLSPELLLQKVNSNENYVKTFKKLYGEVTVENIALAIAE
                     FEKTLITPNSPFDRYLSGDQNAISAQAKKGYEDFKANGCISCHQGQNIGGNMFQKIGI
                     FEEYPNQEDLGRYEITKREADKMVFKVPSLRNIAKTAPYFHDGSIPTLDACVQFMAYY
                     QLGKFLDQETVDNIVAFLESLTGEYHDK"
     gene            13297..15075
                     /locus_tag="RJ336_000423"
     CDS             13297..15075
                     /locus_tag="RJ336_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDZ5212894.1"
                     /translation="MTNKKSSFLIKFIILSTLVLAFILVLLGIIFNNYSSSKDNKELI
                     NIVQQLEISDEKINSVFQNSFNFINYDPSVQAIKKMQENFTKLKTFGIDINKAEEIFN
                     AKLIQLNYFKSANSIAVNSKLYLFELAKNYFEELEQNHETNKNNYKTMSSMLSVLSTE
                     NILQKTTLNQLNNLMKEIKNDVKNENLQLFLKHYKMIVKQISIMQDNSSIYENNSLMK
                     ELKQLDTFTQNTIEQSNLFKFYIALAVFGITIVLFVFFILLTLKKVIIPIHTLEKLSA
                     NLASKEANLHSRLNIDPKSELGQSAQYINSFISTVQNSIIEAIENAKSSHQNSQKLKN
                     NSMMLENSSNSQHEQIQGVKEITHVLDDHINLAGNLAQESIENMQDMHILMDKVELTL
                     SELVNLINENNEKEQNIVANMDNLTQSADNIIEITNSIKDIADQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVGQLADKTSKSLLNINATVNTIVQQINDNKALMDLIHDSMKETS
                     SKTNDLQQELVNSMHKLESSIESTQTMKDKSMEVKDKMLILGTNIDKVNELANSVKDL
                     SCEINNISQNVLNGASKLSEKLSSFQ"
     gene            15181..15348
                     /gene="dba"
                     /locus_tag="RJ336_000424"
     CDS             15181..15348
                     /gene="dba"
                     /locus_tag="RJ336_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein Dba"
                     /protein_id="HDZ5212895.1"
                     /translation="MEFLELLLVLIALILIIKKPEKENLAFGLVMVAWLLMVFFYVGH
                     KTGALLTIMNL"
     gene            15360..16886
                     /gene="dsbI"
                     /locus_tag="RJ336_000425"
     CDS             15360..16886
                     /gene="dsbI"
                     /locus_tag="RJ336_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbI"
                     /protein_id="HDZ5212896.1"
                     /translation="MNEINKTKNFYTLMCLAGFLIILLPVGIANFVFGYMLGDSPCTL
                     CWGQREAMIFIGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGF
                     GLAVFGIHTYFWAEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVL
                     ISAIIVASNVFQAFVSTGVPPYVGQGDPVRFSLNPKYIIWSKEGWNGLWQNISFLGKR
                     DVKAPDYAFAPASEKLGIKFDNDINNAPFAKINDELKITNEQTINFDKAINTLDYINN
                     EFVASSKWDVAFLDNNFSVKEGFELDPYFSASIDPIIGIIPYMNDKFILMGSNKSFLR
                     FAKNPNASEEDIAKQYADFVKGNDKFKGQGESLGRGRLDTVRAKFNHVASMTTDGNYL
                     YLATVPNNKDAKTFVISKVSLKDRVLSGEFTPKANLKEGKTLGDLYVTSMTFKDGEIY
                     ALSKNHNVIAVIDPVKEEVVKTIAFPSSITNARSIFFKDGKINILSYQDGANKLYTLN
                     "
     gene            complement(16907..17581)
                     /gene="queC"
                     /locus_tag="RJ336_000426"
     CDS             complement(16907..17581)
                     /gene="queC"
                     /locus_tag="RJ336_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDZ5212897.1"
                     /translation="MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKE
                     KECFKQICKALKVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCTSDTPPITYVPFR
                     NGIFLSIAGSLAEKENCESVFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVC
                     IKTPLVRLNKAKIVELALKENVPLELTWSCYESEDEACGECDSCLLRLRGFEKAGFKD
                     KIKYKS"
     gene            17657..18883
                     /locus_tag="RJ336_000427"
     CDS             17657..18883
                     /locus_tag="RJ336_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HDZ5212898.1"
                     /translation="MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFI
                     AKMEKDVDMRVIIEGGIFEFLSRVVVTDIRPDVYHEIVRQKKAEVNAWVLSKIEPMIE
                     DIEDGEFLKRFEAYLNGNAYAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNK
                     VEEELEDYYELIGARKIALNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVA
                     ILGYFYSLKIKACDKRLENNFYCALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMK
                     LINERILPFVPEGLRAEFSYILGIREGRNGESNFVKNEFENRTYKNAKIELCSGSLSS
                     FNENEFGAIDGKALKYCDKIAAYIEAGLSISYGVKSKELESGFLGMHEFFKENPTIDG
                     VNFFEICESLREYFKI"
     gene            18975..19499
                     /locus_tag="RJ336_000428"
     CDS             18975..19499
                     /locus_tag="RJ336_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YagU family protein"
                     /protein_id="HDZ5212899.1"
                     /translation="MKKYFQKRYTLAFFIGILAGIFGAIVKWGWEVPFPPRNPNVFWP
                     ADALERVTPPKIFLEQLGLPTDWTYMFSGMQMPLSIFIVHVGFSIIFGVAYCMIAEKW
                     HRITMWQGAVFGFFVYLFAHVIIMPLIAEVPPLSEIPFDEHLSEIFGHIVWLWGMEIV
                     RRDIRNRITKEIEE"
     gene            complement(19511..21187)
                     /gene="ilvD"
                     /locus_tag="RJ336_000429"
     CDS             complement(19511..21187)
                     /gene="ilvD"
                     /locus_tag="RJ336_000429"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDZ5212900.1"
                     /translation="MRSDAIKKGHLRAPNRSLLRACGLKDEDFDKPFIGVANSYIDII
                     PGHYFLNDYAKIIKDEIRKNGCVPFEFNTIGVDDGIAMGHEGMLYSLPSRELIANSIE
                     TVMNAHQLDALICIPNCDKITPGMLMGALRVNVPTIFVSGGPMASGVTKKGEKISLSS
                     VFEAVGAYESKKISEEEFKDIECSACPSGGSCSGMFTANSMNTLCEAMGIALEGNGTI
                     LALSKEREELLRKAARRICEIALDERFKIRNIITQKAVRNAMVVDMAMGGSSNTVLHM
                     LAISREAGVALDIKDLNFISSKVAHIAKIAPSLNSVYMDDIHKAGGVSAVMAEISSRQ
                     GHILELDALTITGESLKERLKNAKIKDENIIRKVDNAYSKVGGLAILFGNLAKQGCVI
                     KTAGIIGERKFKGKAVCFNSQDEAIKGIIKGKVQKGNVCVIRYEGPKGGPGMQEMLSP
                     TSLLMGMGLGADVALITDGRFSGATRGLSVGHISPEAAEGGLIGLLKDGDEIEIDVDA
                     YTIHANVSEEEIAKRKKEFALPQKEVSSRWLRMYQKLVSNASKGAVLDME"
     gene            21347..21994
                     /locus_tag="RJ336_000430"
     CDS             21347..21994
                     /locus_tag="RJ336_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="desulfoferrodoxin FeS4 iron-binding
                     domain-containing protein"
                     /protein_id="HDZ5212901.1"
                     /translation="MRQYETYKCQKCGNEVEVQNVGGGKLSCCGEEMKCITTDLTAVN
                     LMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAEFKAYHEIVDG
                     KPLEVTTKNLVSAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKVEIEHEREY
                     LALKKMLEEEEFFNSEVEELWVCEVCGHIHRGKKAPAACPLCKAPKEYFKREFLG"
     gene            22059..22298
                     /locus_tag="RJ336_000431"
     CDS             22059..22298
                     /locus_tag="RJ336_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HDZ5212902.1"
                     /translation="MKKLLFLFFALTAFLFGAVNINTATLKELKSLNGIGEAKAKAIL
                     EYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITVE"
     gene            22331..22906
                     /locus_tag="RJ336_000432"
     CDS             22331..22906
                     /locus_tag="RJ336_000432"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDZ5212903.1"
                     /translation="MKTLFDTKELLNEFDINLIGIDEAGRGALAGPMMMAACKLNKQL
                     DGLCDSKKLSEKKREELYEIIIKNSNYLILAFSSEQIDALGLSTCLKKGLKLIKKHFK
                     TENNFLYDGNTNLGINGIKTQIKADTSILQVSAASILAKVSKDRVMNFLAKDFPCYEF
                     EKNKAYGTKAHKEFIAKFGICKLHRKSFKLL"
     gene            complement(22907..24352)
                     /locus_tag="RJ336_000433"
     CDS             complement(22907..24352)
                     /locus_tag="RJ336_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HDZ5212904.1"
                     /translation="MGNARGFLDFKRMDFKKIAPKERVLNFKEFTIPLDKKEQEIQGG
                     RCMDCGVAFCHTGVMSEGKDVGCPLNNLIPEWNDLIYRSLWEEAYERLDLTNPFPEFT
                     GRVCPAPCEDSCVCAINGVSVSIKNNELSIIENAFKENLVRVNKPKQYNGKKIAIIGS
                     GPAGLACANTLNSLGYKVSVFERSDKIGGLLMYGIPDMKLDKSIVQRRVDLLKKSGIE
                     FKVNENIDSKDKVSKLLKEFDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQNTKT
                     LLKTGKGADTAKGKNVLVIGSGDTSVDCIAVATRQGAKSIVRFERSPKRPLQRSQNNP
                     WPLKADIFTTDYGLEEAIAVYGKDPREYQKMTKKFLGKTHVEGVEANDLKREFKEGKA
                     INVEISNSKKTYKADLVLLAMGFSGCEEAISKNFGVKLDEKNNISTENFQTTHKKIFA
                     CGDARKGQSLVVWAIKDGIECALSLHQNLAK"
     gene            complement(24363..28853)
                     /gene="gltB"
                     /locus_tag="RJ336_000434"
     CDS             complement(24363..28853)
                     /gene="gltB"
                     /locus_tag="RJ336_000434"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HDZ5212905.1"
                     /translation="MDLENILENNQSIGLYHPKNEHDACGIAAVANIRGIASYKVICD
                     ALEILMNLEHRGGAGAEENSGDGAGILIQIPHDFFKTQELGFELPKKGDYAVAQMFLS
                     PNTDAKEEAKEIFLQGLKDKKLEFLGFREVPFNPSDIGASALKAMPYFLQAFVKKPSK
                     ISAGLEFERVLYSTRRLIEKRAINVPKFYFSSFSSRTIVYKGMFLSTQLSDFYLDFKD
                     VNMKSAIALVHSRFSTNTFPSWERAHPNRYMVHNGEINTIRGNVDSIRAREGLMQSEY
                     FENLDEIFPIIAKPSSDSAMFDNTLEFLALNGRTLEEAFMMMVPEPWHKNENMESKKR
                     AFYEYHSLLMEPWDGPAAIVFTDGVIMGASLDRNGFRPSRYYLTKDDMLILSSETGAL
                     KLDEKNIKAKKRLEPGKLLLVDTARGRVIADNEIKEHYANAKPYKKWLKNLVELEKQK
                     SGVYKHQFLKEDEVLKLQKAFGWSYDELKMSVAAMAQNGKEAIAAMGVDTPLAILSKT
                     YQPLYNYFKQLFAQVTNPPLDAIREEIVTSTRIYLGSEGNLLKPDENNAKRVKIALPV
                     ISNEELFEVKALNKFQVKEFSILYDYSKKTLEKALDELCVKIEDEVKKGVSIIILSDK
                     GVDEKNAYIPALLAVSGVHNHLVRKNLRTHTSLIIESGEPREIHHFACLLGYGATVIN
                     PYLVYESIQKLIANKDLNLSYEKAVENFIKASSSGIVKIASKMGVSTLQSYNGSALFE
                     CLGLSSKVIDKYFTSTTSRIEGMDLEDFEKELIALHKHAFNDTHKALDSKGIHGFRSA
                     KEEHLIDPLVIFNLQQACRNKDYKSFKKYSALVDEKQVNLRSLMEFDFSEAISIDKVE
                     SVESIVKRFRTGAMSYGSISKEAHECLAQAMNKIGAKSNSGEGGEDEERYEIKEGVDK
                     NSAIKQVASGRFGVDLNYLSHAKEIQIKVAQGAKPGEGGQLMGFKVYPWIAKARHSTA
                     GVTLISPPPHHDIYSIEDLAQLIYDLKNANKDAKISVKLVSENGIGTVAAGVAKAGAN
                     LILVSGYDGGTGASPRTSIPHAGIPWELGLAETHQTLILNKLRDRVRLETDGKLMNGR
                     DLAIAALLGAEEFGFATAPLIVLGCTMMRVCHLNTCPFGIATQDTELRDRFKGKVDDV
                     INFMYFIAEELREYMARLGFERLDDMIGRVDKLRQKSVQGKAGKLNLDKILKSLPTYN
                     RTAVHFKDYKDNKLEKTIDYRILLPLCKNAVEKKEPIKLSLEVGNQSRTFATMLSSEI
                     LKTYGKDALDEDSIHIKAIGNAGNSFGAFLLKGIKLEIIGDSNDYLGKGLSGGKIIAK
                     ISNEATFSPEENIIAGNACLYGATKGEVYLDGIAGERFCVRNSGALAVVLGTGVHGCE
                     YMTGGQVVVLGDVGANFAAGMSGGVVYIFGRHNEAHVNTELVDIKDLNAKDEKELKAV
                     IEKHIAYTDSKKAKDILEKFDKKDFFKVMPRDYEKMLKMLDLCKNEKDPNLAAFLKIT
                     QK"
     gene            complement(28988..30295)
                     /locus_tag="RJ336_000435"
     CDS             complement(28988..30295)
                     /locus_tag="RJ336_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HDZ5212906.1"
                     /translation="MILTLLTNPIIISVVLMTLLCLFRFNVLLSLLISALVAGVFSHL
                     ELVDTMNILISGMKENLKTALSYILLGAIAAAISKTNLTAYLIKIVSHFISHKKYLLL
                     LSIALISCFSQNLIPIHVAFIPLLIPPLLSLFNKLKIDRRAVACALTFGLTTPYMVLP
                     VGFGLTFQDLLKDNLNANNVSVSLNDVTNTMYFAAICMIAGLFLALFVFYRKPREYQE
                     VEIAKVDLENLEMTRKEWGVLAGLVLTLILQILTMNLPLSGLLGFVLMVILGGVEFSK
                     VNEVFDDGLKMMGFIAFVILVAAGYGEVLKESGSVVDLVNSVVPWMEQSKFLAVFFML
                     LIGLIITMGIGTSFGTIPIIATLFCPICLELGFSTALIIFILGVAGALGDAGSPASET
                     TMGTTVGLNADKQHDHIKDTCIPTFIFYNGPLLILGSIIAMFL"
BASE COUNT        10290 a         5507 c         4348 g        10259 t
ORIGIN      
        1 taatatacta ttaataggat tgaaaggctt gacttaggga agataagttc cctaagttta
       61 gaaatattta aaaaatttta atattttaaa aaatactctt gaattttttt aggatcactt
      121 gtttttgtaa gtgctaatat aagcaaaact cttgcttttt gaggatttaa atcttcagca
      181 ctaataaaac ctaatttttc atctgaatca ctcacagcaa cacaacctgc tacaaccctt
      241 gaacttacaa caaccttaag cccttttttt aaaagctctt ttaaaacatc tttttgattt
      301 ttgtgtatac ttcctgctcc acttcctgca acaactatgc ccttagttcc atgttcaaat
      361 aaagcttttg cagcgacacc actaccatca tttgaatagc tataaagaat atctactttt
      421 ggcaaacttg tgagtttgct tacatcaaaa ggagcgtttt ttgtgtgagc tttagtaaca
      481 ttattataga aaaagacttt accatctact atataaccca aatccccaaa atcaggagaa
      541 gagaaagcat caacatttaa actatgagtt tttactacgc ctctagcgct taaaatttta
      601 tcatttatag ctaccataac acccttattc ttagcttctt tattggcaac taatgccact
      661 gcattataaa gatttttcgg accatccgca cttatagcag ttgatggacg catagcgcca
      721 actagaacta cgggcttatc acttttaatg gttaaattta aaaaataagc agtttcttcc
      781 atagtatcag taccatgagt tatcaccaca ccgtctatcc cctcagcaaa aagcttagca
      841 atttttttag caagccttaa ccaaatttca tcacacatat ttgaactatc aatatttgct
      901 atttgctccc aactaatatc tgctaaatct ctaatttgcg gaactgcttt aattaataca
      961 tctatatcaa tggctccggc cgtatatcct gttgtagcaa tagtgctatc aatgaagcct
     1021 gctatcgttc cgcctgttcc taaaatagca atccttgatt tagctttttt catacatact
     1081 cctataaaaa gacaacatat aaataatttt ttaatctctt gtatattaat tttttaatgt
     1141 tattaatgca aattataagt aaaaattttt ataaaatctc tttaacaaca aactgtggag
     1201 ttaccattcc cctaaattca ttcttagaaa tacttccaag caaagaaata ttttgattca
     1261 attctggctc tttatcaaaa ttaaaaaata aagcttctat ggttttattt tccttagtta
     1321 aaacaagctt taagtgtttt tcatctttac ctagaagttt tttatttttt acacaaagat
     1381 tttctaaaac aaaaaaaggt cgtggatttt tatgtccaaa aggttcaaaa gattctaaaa
     1441 tttcaagcat ttcaaaatca atttcgctag gttctaagat tcctaaaatt tcatctgtat
     1501 ccaaaaattc actttcagaa atttgcgaac attctttttt gattttattt ttaaattgtt
     1561 caaaattttc agagtttaaa ctgattccag cagcaccttt atgaccacca taattgctta
     1621 atatagaatt tgtcttagaa attaaagcta aaatatcaat cttgccaaca cttcttgcgc
     1681 tgccttttaa gtgttcttca ttttgagaaa atacaaaagc aggtttatta aaatgtttag
     1741 ctaaacgact tgccacaatc cctaaaacac cttcatgcca atttaaaccc gataccacaa
     1801 tacaagaatc gttttcatcg atttgattta aactatcttc aaaaagctgt ttttcttcat
     1861 ctttacgact ttcattaaaa ctaacaattt gctctagata ttctaaagct ttattaaaat
     1921 ctttagtgtg taaaaattca taagaaatac ttgcatcatc cattcttcca gcactattta
     1981 taagcggagc aattaaaaat cctatattat caagagcaaa tttatccttt tgataataat
     2041 gcttaatagc cctaaaagca gcccttttag atttgttaat atgatctatg ccacgcctta
     2101 ctaaagcacg atttaaatct ctaagttcca tcatatctgc aacaattgca atcgccaaaa
     2161 gttctaaaaa tttacacatg tcatatttaa gcttgcacac ctcttttaaa gccgctatca
     2221 aataccatgc gacttgagct ccacaaattt caatttctgg aaaatcacaa tctttttgct
     2281 ttggattgat aatggcaaaa gcatcaggta aaacatcttg aggcatatga tgatcagtga
     2341 taatcaaatc tatatttttt tctttacaga gtttggctgc ttcaagagca gctattccat
     2401 tatctactgt tattattaaa tttacatcaa gttcgttgat gatctcagca tttaatccat
     2461 atccatcttt aaaacgattt ggaattctta taatataatc aaaacctata tcatcgaaaa
     2521 attctgccat aataacacaa gaaatgattc catcaacatc ataatctcct actatggcga
     2581 ctttctcatt tttttctaca gcttctttga tgcgattagc tgctttatat gcatccttta
     2641 aacagcatgg caaaggcaga tcacaaagtt tggtatgcaa atctttttca aagcgtgaag
     2701 ccaaaatttt tttaatttca tttttattaa ttatcttcat agtttatagc tgccttgata
     2761 aaactgcaaa tcacaggatt aacatgctca agtcttgatg taaattctgg atgaaactgc
     2821 acagccaaga aaaaaggatg acagttaagc tcaactgctt caatcaatcc tttgctttca
     2881 ccacttacaa tcaaaccgtg tttttcaaaa tctgctctat attttggatt tgcttcatag
     2941 cgatgacgat ggcgttcttt tacactcttt acttcattat aaaccttagc caaaagggat
     3001 ttttccttga tatcacattt ataagcccct aaacgcatag ttccacctaa aggagttttt
     3061 gcagtacgaa tttgtttttc tccatttgta tccataaatt catcaatcaa ataaaccaca
     3121 ggattttggc atttttcatt aaattcactt gaatttgcat ctttaagttt taatacattt
     3181 ctagcaaatt ccaccaaagc aagctgcata cctaaacaaa ttcctaaaaa aggaatttta
     3241 ttttctcttg tgtattgaat ggcttttatc ttaccttcta caccacgata tccaaatccc
     3301 ccagcaacca aaattccact cacatcttta aatacttcag aactttccat attttcaagt
     3361 ttttcactat ctacccattt taactccact ttagtatcta gggctgcacc tgcgtgtata
     3421 atagcttcag taaggctttt ataactttct tttaaatcca catatttgcc tacaaaagcg
     3481 attttaactt cattgcttgg agctataact ctttttacca aagagtccca attttccata
     3541 ttaggtttta aatttttcaa atccaaaatt tcagcaatag ggcttaaaat atcttgcttt
     3601 aaaaaattaa gtggaatttg ataaatacta gccgcatcaa cactttctat cacgcaattt
     3661 ttttccaccc cgcaagaaat agcaatttta tcttttaaat ctctatcaag agctttttca
     3721 ctacgacaaa taatcatatc aggactaatg cctatgcgcc ttaactcgcc tacactatgt
     3781 tgagttggct ttgtttttaa ttcccctgca gccttaataa aaggtactag agtaagatga
     3841 atattcatag cattattttt acccacttcc aaacgcaaag cacgaatagc ttctaaaaaa
     3901 ggcaagcctt ctatatcccc aacagttccg cctatttcaa cgataagtat atctttgcct
     3961 tctcctgctt ttttaatgcg atctttgatt tctcctacta tatgagggat aacttgaatg
     4021 gttttgccaa gatattctcc acgcctttct ttttcaatca cactttgata aacccgtcct
     4081 gtagtgaagt tattatcttg agataaactc tcatccaaaa aacgctcata atgccccaaa
     4141 tcaagatccg tttctgctcc atcatcagtt acaaaaacct ctccatgctc aaaaggactc
     4201 atagtgcctg gatcaacatt gatataagga tcagctttta aaatactcac tttaagccct
     4261 gaatttttta aaagtgttgc gatagaagca gcggctatcc ctttacccaa agaacttaaa
     4321 actccacctg ttacaaaaat atattttgtt tgtttcattg ataataagcc ttattttttt
     4381 atctaattat agcttgataa aactttttat ttcattagaa ttttaagtaa aaaatgcaag
     4441 aattacaaaa aatattttta tcaaaaaagg aataagcatg caaatcactt tactttttca
     4501 cactccatta tctgtttgtt ctcatgcaac aagaacttgt tggcaaagct ttgaaaaagg
     4561 cgattgcggt ggcgaaaaag ataaagaact tatcgatcgc gtgggcaaca aattcaaaca
     4621 cgcttcaacc ttagaacatc taaactatac tttttatata caaggaattt caagagcttg
     4681 cttacaagaa gttgcaagac accgtcacac tagtcctagt gtaaaaagca cgcgttatac
     4741 cttaaaagaa cttcgcaatg aagctgaatt taaaatagga gattttgaaa atgcaagccg
     4801 ttatcttgtg ctttgtggta atgaagaggt tgataacgca agcattaaag ccttagaaaa
     4861 tttacgcact attttacaaa aaagcattag tctagatata gccaaatact gcttaccaga
     4921 aagctataaa actgaactta cactaacgat taatgcaaga agtttgcaga atttcatttc
     4981 tttgcgtagt tcaaaatcag ctctttggga gattagaaat ttagcaaatg ctttatttga
     5041 agccttgcca caagaacaca aatttatatt tgaacattgc ttacataaag atatagaata
     5101 aatcatacta attttatctt atttaaaata tttttatgct accatttata aaatcaagct
     5161 ttacgcaagt atattttcat ataccttgtg cttgattata gtttcttata aggacttttt
     5221 atggataaac aattttttca agattttcta atgctttcac aagctcatac tatagctact
     5281 cttgctatac tttgtgttgt tttttacgca ttaaaaaaaa tgcgggatat aaaaatcaat
     5341 ttttctcttc gcatgctatt tgcgctttta atgggtttgg ggtttggttt tgctttgcaa
     5401 tatttggcaa attttccaga tgctgaagaa gcaagcaata ttctttggta tagtgaaaca
     5461 aaacattggt ttgcatttgt aagttctgtt tttgtagctt ttataaaaat gctagttgtt
     5521 cctcttgtaa gcatttgcat tataaaagta attatagaaa ttgataaaaa tatcaaaata
     5581 tcctccttgc ttggaataag tcttttttgg atactcttta gcacagccat agctgcaacc
     5641 ttgggtatat ttttaggtta tagttttgat ttaggaagta attttgctat atatgaagga
     5701 aataaacaaa ttcgcgaaat tcaaactttt tcaaatatta tactagggct aatacctagc
     5761 aacatcattg cagctattaa taaagaaaat attatagcta ttgtcatttt ttcttttttt
     5821 ataggaatta gtgctaaaaa aatttctaaa aaagaagagt atgaacaagc ctttaaaagt
     5881 tttcataatt ttatcctaac cttttataat attatgatga acatgactgc tacagttatt
     5941 agatttatgc cttatgctgt agtttgtatg atggctaatg tgcttttaag caatggtttt
     6001 gaagctatca aaacagctgg actttttata atgcttattt atatagctat gttaataatg
     6061 ttcggggtgc attttttact tcttgcttca caagggctaa accctataaa atatgcaaaa
     6121 aaagcatttc ctgtatggtt atttgcattt agctcaagat cttctttggg cactttgcct
     6181 atgactactt caactttgca aaataaattt ggagttaatt cagctatagc taattttgta
     6241 gcatctatag gtacaacaac aggacttaat ggttgtgcgg gatattttcc agctttagcg
     6301 gcagtttttg tagcttttgc tacacataca catattgatt ttacatttgc tttaatgata
     6361 gttttggtag ctgttattgg atccttgggt atagctggag tacctggaag tgcaactatg
     6421 gcagcttcta ttatgctagc agggattgga tttggtaata attttgtcat gctaagtttg
     6481 attttagcta tagatcctat tatagatatg gcaagaacag caagtaatgt ctcaggagct
     6541 atgacttcgg cactttgtac tgcaaaaaat ctaaaagccc tagataaaga aatttacaat
     6601 tcttaatctc ttaaaaccca atatttttca ttgggtttta gtatttattg gcaaccttca
     6661 cattctatgc tacgatctgc aacattgact ttttcactat cagggctttc gcttcttaga
     6721 taataagtag attttactcc gagctcccaa gcgagttgat aaatttcatt taaatatccc
     6781 ccacttgctt tatcaagcga taaaaagata tttaaactct gcccttgatc gatccattta
     6841 ccacgcacag cagcagcctt tacaagaatt ttttgatcaa gttcgtaggc tggagtatag
     6901 tattgccaag tatcaaggct taaatttggc acaacaacag gtatcatacc acttaaattt
     6961 tgttcaaacc actttctttt gtaaacaggt tctatagtct gcgtagtacc cactaaaata
     7021 gaaatagaag aagtaggtgc aatggccatc aaataaccat ttctcatacc atctttttta
     7081 actttttctc taagtttaac ccagtcgcat tcactttgat caaataagcc ctctcttaaa
     7141 gttaaagctt tagccttagg acttgctaca tcaataggaa aaatcccctt gctccaattt
     7201 gatccttcaa aatcttcata agaacctttt tcaagagcta aatttgaact cgcattaata
     7261 gcctcaaagc taatttgttc cataatctca tcgattttat ttaaatgctc atcgcttccc
     7321 caataaatct tagcctcagc aagcatttgt gcctcaccca tgactccaag acctatggcg
     7381 cgagatttta aatttgtatc ttttactttt ctatgaggat aaaaatttaa atctatcaca
     7441 ttatcaagca tacgaatagc cgttggcaca acacgctcta tatcttcttt agtatacact
     7501 ttactaagat ttatacttgc taaattacaa acggctgttt ttccatcatt tttatatttt
     7561 tccactatat aaactttatt accatcaata ctatctaaag ttgagatttt tttggctggt
     7621 ttttcatatc ccctatcgat cacaactttt tgttcttcat caaaatgaag ctcatctcca
     7681 ttttcaaaaa ctactttgat ttgataataa tttggctcgg tattttgaaa aatttcagta
     7741 cataaatttg aacttctaat aattcctaca tgagcatttg gatttgctct gttggcacta
     7801 tctttaaagc ataaaaatgg caagcctgtt tcaaaataat ttagcaaaat tttcttccaa
     7861 agctctttag cttctacgat ttctttggta atgctttcat ctttttcata ttcttcatag
     7921 cgtttttcaa aagcctcgcc atataaatca cacaaatccg ctgtatctgc aggatcaaaa
     7981 agagtccatt tatcattagc tcttactctt ttcataaaaa gatcattgat ccataaagca
     8041 gggaaaagtt catgagcacg gcgtctttct tcgcctgaat ttttacgcaa atcgataaaa
     8101 tcacttatat ccatgtgcca aggttctata taaacggcta tagccccttt tctggttcct
     8161 agttgatcta ctgccacggc aatatcatta gtaattttca agaaaggtat aatccctcct
     8221 gcggcatttt tatgcccatc tatgcttcca cccatagcac gcactttaga ccaatcccaa
     8281 cctataccac caccaaattt agaaagtaaa gccatttctt gataagaatc aaaaatacct
     8341 tcaatattat caggggttga tcctatataa caagagctaa gctgatggcg tgttgttctt
     8401 gcattagata aagtcggagt tgcaagcatg agttcaaatt tagaaataag atcgtaaaat
     8461 ttcttcgccc attcttgagg attaaattca ttctgcgcta aaaacatcgc aatggccata
     8521 aacatttgct gaggaagttc tataggcata cctttactat ctttaatcaa gtatctatca
     8581 tataaagttt taataccaag ataagtaaat tgcatatcgc gttcaggttt aatataagca
     8641 tttaaatcat ctaaatcata tttttcttta agaccaagta aaattcttcc ttctttttca
     8701 cctttttcaa aatactcaca caaatgatta tagcgattca taccattaac ttttttatat
     8761 aaatcaaata aaaaaagtct agctgcaaca aaggtccaat ttggacaatc aatatctatc
     8821 ttatctactg cagttttaat taaagttttt tgaatttctt cagttgaaat tccatcgcga
     8881 aattgaatct ttgcatcgag ttcaagttcg cttaaattca caccctctaa atcttttaca
     8941 gcatcagagg tgcatttttt gatcttggaa acatccaatt cttctgtacg accatttctt
     9001 ttaataactt tcattgcctt ccttgctttt tatttaaatg ttcttttaaa aattgcatca
     9061 acattttttg tatagtagtt ataatcgaaa cattttctta catcctcttc gctcaaactt
     9121 tttcttaaat cttcatcgct taaaagcgct aacaaaaaca aactttcatt tttttcattg
     9181 atagcagcct tgccattttg caaatctgcc caaactttca tagcgtttct ttgaactatt
     9241 ttataagctt cttcacgact aatgccttta aatggaagct ctaaaagcac cctccctgaa
     9301 aatacaagcc cgcctgtaag atttaaattt ttcatcatat tttcaggata aactaaaagc
     9361 ttatcaatca aatttgtaag acgcataagc ataaaatcag ccgtgataaa agcatcaggc
     9421 aaaataaatc tttcaacact agaatgagat atatctcttt catgccaaag tgcaacattt
     9481 tctaaagctg gagttacaaa agatctaagc acacgacaaa gccctgtgat attttcactt
     9541 aaaacaggat ttcttttatg tggcatagct gaacttcctt tttgtcctac actaaaatac
     9601 tcttcagcct cataaacttc agttctttga aaatgtctta tcgctacagc gatttgctca
     9661 caacttgaag ctaaaattgc aatagcagaa ataacttgag cataacgatc tctttggatc
     9721 acttgatttg aaacaggggc agctttaaga cctaaatttt tacaaacctc ttcttcaaat
     9781 tctaaaggag catgagcaaa atttcccatt gcaccactga tttttccata gcttatcact
     9841 tcttttgcat gttctaaaag ctcttttgca tgcaaaattt catcatacca aatagctaac
     9901 actaaaccaa aagtgatagg ctctccatga attccatgac ttcttcctac cattaaggta
     9961 tttttatgct ccaaagcacg ctttttgatc acttctaaaa gcaaagaaac atcttctaaa
    10021 ataagctcca aactctcttt tatctgtaaa gcaacagccg tatctataca atcagaactt
    10081 gtcattgcat aatgcacaaa acgactctct tctcccaaac tttcacttac acttgtaaga
    10141 aaagcgataa catcgtgttt tgtggttttt tctatttcgt ctattcttgc aatatcaaat
    10201 tttgcatttt taagaatttt ttcgcagtct gtgtcattaa tgagaccgag tttattccaa
    10261 gcttttacag cggctaattc tacttttaac cacgcatcgt attttgcttg catgtcccat
    10321 tttttagcca tgatttctct gctatatctt tcaaccatct ttgaaacctt tttagctata
    10381 attttatatt ttaaaaaaca gaaattatat caaattatcc taagaaagtt attaaatggc
    10441 ttacataaaa ataaaactct caaataatgg aaaaaaggca tttcaagtcc ttatggaaaa
    10501 tttaaaaatt agcataaatg aagcacaaaa actcatagac aaaaaaagac ttttttgtga
    10561 tggaatttta gtagaagaaa agaatgaaat tttaaatggt ttagtagagc ttatagtcta
    10621 tgaaaacaat cccaaaggag tagaaattgt ctttgaaaat gaagactttg ccatacttga
    10681 aaaagaaagt gggatcttaa gtcatccaaa tggtagacat tgtaaataca gtcttagtga
    10741 tgaaatttgg catctttggg gaaaagaagc ttgcgtagca cacagacttg ataaagaaac
    10801 gagcggactt atacttgtag ccaaaaataa aaaagctcaa attgatctta aaactttgtt
    10861 tgaaaaaaaa ctggttcaaa aagaatacct tgctctagct aacggaaaaa tagaagaaaa
    10921 ttttataatt gataaagcca taaatttagc caaaaactac gatgatgtaa aaacaaggat
    10981 gcaaatttgt aaggaaggaa aacaagctat cactgagttt gaaattttag aatactttcc
    11041 taaaatcaac gctactcttt tactctgcaa acccttaaca ggcagacaac accaaataag
    11101 agtgcattta cactataaaa accataccat tttaggcgat ccactttatg ggcttagcaa
    11161 agaacaaatc gaaagtattt tagatgaaaa attaaccccc aaagaacgct taaaacttac
    11221 aggtgccttg cgtttgtgtt tgcattctta tcgtttgaaa tttcaatata aaaatcaaaa
    11281 ttttaatatc aactcaaaaa taaacataaa agaaattttc aacaattcta taaaataaaa
    11341 tgatgtttca ctacgctaca atcaatcact tttttaccaa attttaaaac aaaaaaataa
    11401 ttcttgctaa aactttaagt ataattaaat aaaaaagcga gattttccaa atgaaatttg
    11461 ttaattttat acagggtcaa aaacccaatc taggagtact aaattctagt ggaaaaattg
    11521 taagttttga tgatcttggc attgaaacta acgatatgaa tgaatttatt atccattttg
    11581 ataaatttaa acacaaactt acagacttgg attctaaaat agcctatgaa attccacaag
    11641 aaaattatct agcccctatt atagaacctc gtcaagatat tatatgtctt gggattaatt
    11701 ttttagatca tgccaaagaa tctgccaaat ttaagggtga aaaatttgaa gaaagagaat
    11761 atcctgtata ttttggaaaa cgttgcaatc aagctacgcc accttttggc gatatacctt
    11821 tacatgcaga tgtaacttct cagcttgatt atgaatgtga gcttgcattt attttaagta
    11881 aagatgctta taaaatcaaa gctaaagatg caaaagatta tatctttggc tatactatta
    11941 tcaatgaaat ttcagctcgc gaacttcaaa aacgccacaa acaattctac cgagcaaaaa
    12001 gtcttgaagg tagcactata atgggacctt atatcacaag cgtagatgaa atttcttatc
    12061 ctcctaaact ccaacttcaa agctatgtca atgatgaact acgccaaaac tctaacactc
    12121 aattgtttat ttttgatatt gcttatgtct tagaagaact tagtgcaggc atgcttttaa
    12181 aagctggaag tattatatct atgggaactc ctagtggagt aggtatgggg ttaaatccac
    12241 ctactttttt aaaatcagga gataaagtac gttgcgttat agaaaattta ggagaacttt
    12301 gtaataaaat aaaaaatatc aattattaaa taatttacta aaattatact ataatggcat
    12361 tttaaaaact taaattaagg caaaaattta tcatgaaaaa aataataatg attttatgtt
    12421 tatcttatgc aaatatagtc tttgcagtag atatgataac ccctattcca aattccatct
    12481 cttatgataa agaaaaagct aaacttggaa aaagtcttta tatggataaa agtttatcca
    12541 aagatggaaa agtttcgtgc aatacttgcc ataggcttga tcaacacggc gttgatggac
    12601 ttgaattttc aataggagtt gataatcaac tcgataaacc ctttaacact cctacaacct
    12661 ttaattctgt atttaatttt gtgcaatttt ggaatggtag agctaaagat ttagcagaac
    12721 aagctacagt accttttttc aatcctaaag aaatggggct aagtcctgaa cttcttttac
    12781 aaaaagttaa ttcaaatgaa aattatgtaa aaacttttaa aaaactttat ggagaagtta
    12841 cggtagaaaa catagctctt gcaatcgccg aatttgaaaa aaccttgatc actccaaatt
    12901 ctccttttga tcgctatctt agcggggatc aaaatgctat ttcagctcaa gctaaaaaag
    12961 gttacgaaga ttttaaagct aatggctgca tctcttgtca tcaaggtcaa aatataggtg
    13021 ggaatatgtt tcaaaaaatc ggtatttttg aagaataccc aaaccaagaa gatttagggc
    13081 gctatgaaat cacaaaaaga gaagctgata aaatggtatt taaagttcct agtcttagaa
    13141 atatagccaa aaccgcacct tattttcatg atggatctat acctacttta gatgcttgtg
    13201 ttcagtttat ggcttactat caactaggaa aatttttaga tcaagaaaca gttgacaata
    13261 tagttgcatt cttagaaagc ttaacaggag aatatcatga caaataaaaa aagttcattt
    13321 ttgataaaat ttattatttt atctacacta gttttagctt tcattcttgt tttattaggt
    13381 attattttta ataactattc ttcatctaaa gataataaag aattgataaa catagttcaa
    13441 caactagaaa tttcagatga aaaaatcaat tctgtttttc aaaatagttt taattttatc
    13501 aactacgatc caagtgttca agcaataaaa aaaatgcaag aaaactttac aaaacttaaa
    13561 acttttggga ttgacataaa caaagcagaa gaaattttta atgccaaatt aatccagctt
    13621 aattatttta aatccgcaaa ttccatagca gtaaattcaa aactttattt atttgaacta
    13681 gctaaaaatt attttgaaga attggaacaa aaccatgaaa caaataaaaa caactataaa
    13741 acaatgagtt ctatgttaag cgttctttca actgaaaata ttttacaaaa aacaacatta
    13801 aatcaactca acaatcttat gaaagaaatc aaaaatgatg taaaaaatga aaatttgcaa
    13861 ctttttttaa aacactataa aatgattgta aagcaaattt ctattatgca agataattct
    13921 tctatttatg aaaataattc tcttatgaaa gagttaaaac aacttgacac ttttacccaa
    13981 aatactatag aacaatctaa tttatttaaa ttttatatcg ctttggcagt atttggaatt
    14041 actatcgtat tatttgtatt ttttatttta ttaacactaa aaaaagtcat cataccaatt
    14101 catactttag aaaaactaag tgctaattta gctagcaaag aagccaatct acattctcgt
    14161 ttaaacatag atccaaaaag cgagcttgga caaagcgctc aatatattaa ttcatttatt
    14221 tccaccgttc aaaactcaat catagaagcc atagaaaatg ctaaatcaag tcatcaaaat
    14281 tcacaaaaac tcaaaaacaa ctctatgatg cttgaaaaca gctctaattc gcaacatgaa
    14341 caaattcaag gagttaaaga aatcactcat gttttagatg atcatatcaa tcttgcggga
    14401 aatttagcac aagaaagtat agaaaatatg caagatatgc acatactaat ggataaagta
    14461 gaacttactc tatctgaact tgtaaattta ataaatgaaa acaatgaaaa agaacaaaat
    14521 atagtagcca atatggacaa tctaacccaa agtgcggata atattataga aatcacaaac
    14581 tccattaaag acatagctga tcaaactaat ttacttgccc taaatgcagc tatcgaagct
    14641 gcaagagcag gcgaacatgg gcgtggattt gctgttgtag ccgatgaagt tggacagctt
    14701 gctgataaaa caagtaaatc tcttttaaac atcaatgcta ctgttaatac tatagtccaa
    14761 caaatcaatg acaacaaagc cttaatggat cttatccatg attctatgaa agaaacctct
    14821 tcaaaaacca atgatttaca acaagaactt gtaaattcta tgcataaatt ggaaagctct
    14881 atagaatcaa cccaaaccat gaaagataaa agcatggaag taaaagataa aatgcttatc
    14941 ctaggaacaa atatagataa agttaacgaa cttgcaaatt ctgttaaaga tttatcatgt
    15001 gaaatcaata atatctctca aaatgttcta aatggtgcct ctaaactctc cgaaaaatta
    15061 agtagctttc agtaactttt ttcacgttaa tttaacttaa cgtggaattt caataaaaat
    15121 tttattttta atttatgttt ttcaagtaaa attaccagtt tttatttcaa aggagatact
    15181 atggagtttc ttgaactttt attagtttta atcgccttga tactgattat caaaaaacca
    15241 gaaaaagaaa atttggcttt tggtttggta atggtagctt ggcttttaat ggtttttttc
    15301 tatgttggcc acaaaacagg cgcactatta acaataatga atctgtaagg aagggctaaa
    15361 tgaacgaaat caataaaaca aaaaatttct acacactaat gtgtttagca ggctttttga
    15421 ttatactctt gcctgtaggt attgcaaatt ttgtatttgg ttatatgttg ggcgatagtc
    15481 cttgcacgct ttgctgggga caaagagaag caatgatctt tatcggtgta atggcgcttt
    15541 tcattgttcg ttatggtatg aaaggtaaat accttgctgc tcttttaatc atgacagcag
    15601 tagggcttta tcaatctttt gctcactatg gtaatcacgc tcatagagat ttagatcaag
    15661 gttttggttt agcagttttt ggtatccata cttatttttg ggctgaagta gtattttggg
    15721 ctgttgtatt gctcttaggt gtgatttttg cttttgctcc taaatttaat gcttttgaag
    15781 ctgaactaaa tggagaaaag tttagaaaat atactaaatt tagctttgca gcagttttaa
    15841 tcagtgctat catcgtagca tcaaatgttt tccaagcctt tgttagcaca ggtgttcctc
    15901 cttatgtagg acaaggcgat cctgtaagat ttagtttaaa tccaaaatac atcatttgga
    15961 gtaaagaagg ttggaatggt ttatggcaaa atatttcttt cttaggaaaa cgcgatgtta
    16021 aagctcctga ttatgctttt gcacctgcaa gtgaaaaact tggcataaaa tttgataatg
    16081 atatcaacaa tgctccattt gcaaaaatca atgatgagct taaaatcaca aatgaacaaa
    16141 ccataaattt tgacaaagcc atcaatactc ttgattatat caataacgaa tttgtagcaa
    16201 gttctaaatg ggatgtagct ttcttagata ataattttag cgttaaagaa ggttttgaac
    16261 ttgatcctta tttttcagct tctatcgatc caatcatcgg tatcatacct tatatgaacg
    16321 ataaattcat tcttatgggc tcaaacaaat ctttcttaag atttgcaaaa aatcctaatg
    16381 caagtgaaga agatatcgct aaacaatacg ctgactttgt aaaaggcaat gataaattta
    16441 aaggtcaagg cgaaagttta ggtcgcggaa gacttgatac cgtaagagca aaatttaacc
    16501 atgtagcaag tatgactaca gatggaaatt atctttatct tgcaactgtt ccaaacaaca
    16561 aagacgctaa aacttttgta atctctaaag tttctttaaa agatcgtgtt ctttcaggag
    16621 aatttactcc aaaagcaaat cttaaagaag gtaaaacttt aggcgatctt tatgtaactt
    16681 ctatgacttt taaagatggg gaaatttatg cacttagcaa aaatcacaat gtgattgccg
    16741 taattgatcc agtcaaagaa gaagtagtga aaactatcgc tttcccaagc tctatcacta
    16801 atgctagaag cattttcttt aaagatggaa aaatcaatat tctttcttat caagatggag
    16861 caaacaagct ttatacttta aactaagctt taagtcctag tgaaaactag gacttatatt
    16921 taatcttatc tttaaatcct gctttttcaa aacctcttaa acgaagcaaa caactatcgc
    16981 actccccaca agcttcatct tcactctcat aacaagacca ggtaagttct aaaggtacat
    17041 tttcttttaa ggctagttct acaattttag ctttgtttag tctaacaagc ggagttttta
    17101 tacaaacttt gaaattctta ctcgtacctt cattgataaa ttcttgtgcc ttttgtataa
    17161 actcatcagt acagtcagga taaccactgc catcttcttc taccacccct ataaaaacac
    17221 tctcacaatt ttccttttca gccaaagatc ctgctatact taagaaaatt ccattgcgaa
    17281 aaggcacata agtgataggt ggagtatcgc ttgtacaaag ctcattttta gggatgtcta
    17341 tacttttatc ggttaaggca ttgcccccta tatctttgat aaaactcaca tctaaaatat
    17401 aagatttttc tacttttaaa gccttgcaaa tttgcttaaa acattctttt tctttttctt
    17461 gagtgcgttg ttcatagtca aaatgcaaag cgataatttc ataaccttct tttttggcca
    17521 gataagcaca caaagtacta tccataccgc cacttatgat acaaagtgct tttttactca
    17581 tttttatcct taaatttgct ataatttcac aattttaacg aaaattttta aatttaaatt
    17641 gcaaaaaggc aaaagcatga taaacataaa actcatagaa cacattttta aagccgcttc
    17701 tatcagtcgt tggaatgatt atccaagaat ggcaaatttg gttgaacttg acaaacaagc
    17761 tcataaattc atcatcgcat attttatcgc taaaatggaa aaagatgtgg atatgagagt
    17821 gattatagaa gggggaattt ttgagttttt aagtcgtgtt gtggtaactg atatacgccc
    17881 tgatgtgtat catgaaatcg tgcgtcaaaa aaaagctgaa gttaatgctt gggttttaag
    17941 caaaatcgaa cctatgatag aagatataga agatggggaa tttctaaagc gttttgaagc
    18001 gtatttaaat ggtaatgctt atgctaaaga aagacttatc ttaaaagcag cttcatattt
    18061 tgctacaaga tgggaattta acatagttta tcaaacctca gcttttttaa atgatattga
    18121 tgagattaaa aacaaagttg aagaagaatt agaagattac tatgagctta taggagctag
    18181 aaaaatcgct ttaaatcaaa aaatagccaa aattattgat cttagcggaa gacttcgctt
    18241 tcaaaaacgt tgggctcaaa ctccacgcat accagaaacc gcggttttag gacatatgct
    18301 tgtggtggcg attttaggat atttttactc gctaaaaatc aaggcttgcg ataaaagact
    18361 tgagaataat ttttattgtg ctttgtttca tgatttgcca gagtctttaa cacgtgatat
    18421 tatcagccct gtaaaatacg gcattgatgg acttcatgat atcataaatg attatgaaat
    18481 gaaacttatt aatgaaagaa ttttaccctt tgtacctgag ggtttaaggg ctgagttttc
    18541 ttatatttta ggcattagag aaggtagaaa cggtgagtca aattttgtaa aaaatgagtt
    18601 tgaaaatcgc acttataaaa atgctaaaat cgagctttgc agcggaagtt taagctcttt
    18661 taatgaaaat gaatttggtg ctatagatgg taaggcgctt aaatactgcg ataaaattgc
    18721 tgcttatata gaagcaggac ttagtataag ttatggtgta aagtctaaag aacttgaaag
    18781 tggtttttta ggaatgcatg agttttttaa agaaaatcct accatagatg gggtgaattt
    18841 ttttgaaatt tgcgaaagtt taagagaata ttttaaaatt taaataagat ttttatactc
    18901 ctattttcaa tatgttttaa ataaaaatat tataaattca aattttattt tgtataaaac
    18961 ataaaggagt tattatgaaa aaatactttc aaaagcgcta tactttagcc ttttttatag
    19021 gtatattagc gggtattttc ggagctattg ttaaatgggg ttgggaagta ccttttcctc
    19081 caagaaatcc caatgttttt tggccagcag atgctttaga acgtgttact ccacctaaaa
    19141 tttttctaga acaactaggc ttacctactg attggactta tatgttttca ggtatgcaaa
    19201 tgcctttgtc aatttttata gtacatgtcg gtttttctat tatttttgga gtggcttatt
    19261 gtatgatagc ggaaaaatgg caccgtatta ctatgtggca aggtgcagtt tttggatttt
    19321 ttgtttatct ttttgcccat gttattataa tgcctttaat tgcagaagtt ccaccacttt
    19381 ctgaaattcc ttttgatgaa cacctgtctg aaatttttgg ccatattgtt tggctgtggg
    19441 gcatggaaat agttcgtaga gatataagaa atcgtataac caaagaaata gaagaatgaa
    19501 aggaagcctt tcattccata tctaaaaccg cacctttact agcattgcta acaagttttt
    19561 gatacattct aagccatctt gaagacacct ctttttgagg caatgcaaat tcttttttac
    19621 gtttagcaat ttcttcttca cttacatttg catggatagt ataagcatct acatcaattt
    19681 ctatttcatc tccatctttt aaaagtccta taagaccacc ttcagctgct tcaggggaaa
    19741 tatgaccgac gcttaaaccc cttgtagccc cactaaaacg accatcggtg attaaagcta
    19801 catcagcacc taaacccata cccattaaaa gtgaagtagg acttaacatt tcttgcatac
    19861 caggaccccc ttttggacct tcatagcgta ttacacaaac atttcctttt tgcaccttgc
    19921 ctttaataat gccttttata gcttcatctt gagagttaaa acaaacagct ttgcctttaa
    19981 attttctttc tccgattatt cctgcggttt ttataacgca accttgcttg gctaaatttc
    20041 caaacaaaat ggcaagccca cctacttttg agtaagcatt atctacttta cgaatgatat
    20101 tttcatcttt gattttggca ttttttaagc gttctttgag actttctcct gtaatggtca
    20161 gtgcatcaag ttctaaaata tgtccttgtc tgcttgaaat ttcagccata actgcactca
    20221 caccgcctgc tttgtggata tcatccatat aaacactatt tagcgatggg gctatttttg
    20281 ctatgtgtgc aactttgctt gagatgaaat ttaaatcttt aatatctagt gctacccctg
    20341 cttcacgcga aatggcaagc atgtgtaaaa ctgtattgct acttccaccc attgccatat
    20401 ctactaccat agcattacgc acagcttttt gagtgatgat attacgaatt ttaaaacgtt
    20461 catctagggc gatttcacaa atacgacgcg ctgcttttct taaaagctct tctctttctt
    20521 tacttaaagc taaaatggtt ccattgcctt ctagtgctat acccatagct tcgcataagg
    20581 tattcataga atttgctgta aacattcccg aacaagatcc accacttgga caggctgaac
    20641 attctatatc tttaaattct tcttcactaa tttttttgga ttcataagcc cctacagctt
    20701 caaaaacaga gctaaggctg atcttttctc cttttttggt tactcctgaa gccataggcc
    20761 caccacttac aaaaatggtt ggaacattga cccttaaagc tcccattaac ataccaggag
    20821 taattttatc gcagtttgga atacagatta aagcatcaag ttgatgagca ttcatcaccg
    20881 tttcaataga atttgcgata agttcacgac ttggtaaaga ataaagcata ccttcatgtc
    20941 ccatagctat accatcatct acgcctatgg tattaaactc aaaaggtacg caaccatttt
    21001 tgcgtatctc atctttaatg attttagcat aatcatttaa aaaataatgc cctgggatta
    21061 tatctatata gctatttgct acacctataa aaggtttgtc aaaatcttca tctttcaaac
    21121 cacaagcacg aagtaaagaa cgattaggtg ctcttaaatg tccttttttt atcgcatcgc
    21181 ttctcattgt aactcctgat aataattttt taaaattata tttagcaaag cttaattttt
    21241 gtgaaattta ttttgatata cattttcata aatgataaaa attattaatt gacaaaaata
    21301 tttttttata atacaatact ttttgataat caaaaaagga gtcaaaatga gacaatatga
    21361 aacctataaa tgccaaaaat gtggtaatga agtagaagtt caaaatgtag gtggaggtaa
    21421 gcttagttgt tgtggtgaag aaatgaaatg tatcactaca gatttaactg cagtaaattt
    21481 gatgaaagct tttgcgggcg aatctatggc gagaaacaaa tacgatttat ttgctgatgt
    21541 agctgaagaa gaaggttggc atgcggttgc tagacatttt agagaagcag ctgaaaatga
    21601 aaaatggcat gcaagagcag aatttaaagc ttatcatgaa atcgttgatg gaaaaccttt
    21661 agaagtaact acaaaaaacc tagtaagtgc tgcagaaggt gaaaactatg agcacacaac
    21721 tatgtatcca aattttgcaa aaattgctga agatgaaggt aaaaaggcta tagcaagatt
    21781 atttacagct attggtaaag tagaaatcga acacgaaaga gaatatctag cacttaaaaa
    21841 aatgcttgaa gaagaagaat tttttaatag cgaagtagaa gaattatggg tttgtgaagt
    21901 atgcggacat atacatcgtg gcaaaaaagc tccagcagcc tgtcctttat gtaaagcacc
    21961 aaaagagtat tttaaacgcg aatttttggg ttaagttaag aaattcttat cctttttaag
    22021 ataatattat aattattttt taataaaagg ataagaaaat gaaaaaatta ctatttttat
    22081 tttttgcttt aacggctttt ctctttggtg ctgtaaatat caacactgca acgctaaaag
    22141 aattaaaaag tttaaatggt attggcgaag ctaaggctaa agcgatttta gaataccgta
    22201 aagaagcaaa ttttacaagt attgatgatc ttaaaaaagt taaaggcata ggtgataagc
    22261 tttttgaaaa aatcaaaaat gatatcacag tagaataaaa gggcattttt gcccttcttt
    22321 ttagaaaaat ttgaaaactt tatttgacac aaaagaactt ttaaacgaat ttgatataaa
    22381 tttaatcggt attgatgaag caggacgcgg tgctttagca ggtcctatga tgatggcagc
    22441 ttgcaaactg aacaaacaac ttgatgggtt gtgtgattct aaaaaactaa gcgaaaaaaa
    22501 acgcgaagaa ctttatgaaa tcatcatcaa aaattcaaac tatctcatac ttgctttttc
    22561 ttcggaacaa atcgacgcac taggcttaag cacttgttta aaaaaaggct taaaacttat
    22621 aaaaaagcat tttaaaacag aaaataactt cttatatgat ggaaacacca acctaggtat
    22681 aaacgggata aaaacacaaa tcaaagccga cactagcatt ttgcaagtaa gtgcagctag
    22741 catacttgca aaagttagta aagatagggt gatgaatttc ttagctaaag actttccttg
    22801 ttatgaattt gaaaaaaaca aagcctatgg cacaaaagct cataaagaat ttatagctaa
    22861 atttggaatt tgcaaactcc accgaaaaag ttttaaactt ttatgattat tttgctaaat
    22921 tttgatgcaa actcaaagca cattctatac catcttttat agcccaaaca actaaagatt
    22981 gtccttttct agcatctcca caagcaaaga tttttttatg agtggtttgg aaattttctg
    23041 tgcttatgtt gtttttctca tctaatttca ctccaaaatt tttagagata gcttcttcgc
    23101 acccgctaaa acccatagct aaaagcacta aatccgcttt ataagttttt ttagaatttg
    23161 aaatttcgac atttatagct ttgccttctt taaactcgcg ttttaaatca tttgcttcaa
    23221 caccttctac atgagttttt cctaaaaatt tctttgtcat tttttgatat tccctaggat
    23281 ctttgccata tacagcaatg gcttcttcta aaccataatc agtagtaaaa atgtcagctt
    23341 ttaaaggcca aggattgttt tggcttcttt gcaaaggtct ttttggactt ctttcaaaac
    23401 gcactataga tttagcccct tgtcttgtcg ctacagcgat acaatccaca cttgtatccc
    23461 cgcttcctat aaccaagaca tttttacctt tggccgtatc tgcacccttg cctgttttta
    23521 acaaagtttt ggtattttgc gttaaaaaat caagggcaaa ttcaacccct tttagctttc
    23581 taccttctat atcaagatct ataggcttac ttgctcctgt acaaagcacc aaagcatcaa
    23641 attcttttag aagttttgaa accttatctt tgctgtctat attttcattc actttaaatt
    23701 caatcccact ttttttaagc aaatccaccc gtctttgaac tatactttta tcaagcttca
    23761 tatcagggat gccatacatc aaaagtccgc ctattttatc gcttctttca aaaacactta
    23821 ctttataacc tagtgaattt aaagtgttag cacaagcaag cccagcaggc ccacttccta
    23881 tgatagcgat ttttttgcca ttgtattgct taggtttatt tactcttact aaattttcct
    23941 taaaagcatt ttctataatg gataattcat tattttttat actcacacta acaccattta
    24001 tcgcacacac acaagaatcc tcacaaggag cagggcaaac acgaccggta aattcaggaa
    24061 aaggattggt aagatcaagt ctttcataag cttcttccca taaagaacga taaataagat
    24121 cgttccattc aggaatgaga ttgtttaaag gacagcccac atcttttcct tcgctcatca
    24181 cacccgtatg acaaaaggct accccacaat ccatacatcg tccaccttga atttcttgtt
    24241 cttttttatc caaaggtata gtaaattctt tgaaatttaa aaccctttcc ttaggagcaa
    24301 tttttttaaa atccattctt ttaaagtcta aaaaacctct tgcatttccc attttttact
    24361 ccttattttt gtgtgatttt caaaaatgct gctaaatttg gatctttttc atttttacaa
    24421 agatcaagca tttttaacat cttttcataa tctcttggca tgactttaaa aaagtctttt
    24481 ttatcgaatt tttctaaaat atctttagcc tttttagaat ctgtataagc gatatgtttt
    24541 tctatcacgg cttttaattc tttttcatcc ttagcattaa gatctttaat atccacaagc
    24601 tcggtattta catgagcttc attgtgtctt ccaaagatat aaacaacgcc cccactcata
    24661 ccagcagcga aattcgcacc cacatctcca agaactacaa cttgcccacc tgtcatatat
    24721 tcacagccat gcacacctgt tcctaaaacc acagctaaag cccctgaatt tcttacacaa
    24781 aatctttccc ctgctatacc atctaaatac acttcacctt ttgtagctcc gtataaacaa
    24841 gcatttcctg cgatgatatt ttcttcaggt gaaaaagtgg cttcatttga aatttttgct
    24901 atgattttac caccacttaa acccttgcct aaataatcat tgctatcacc tataatctca
    24961 agtttaatac cctttaacaa aaacgctcca aagctattgc ctgcattgcc tatagctttg
    25021 atatggatac tatcttcatc taaagcgtct tttccataag tttttaaaat ttcacttgaa
    25081 agcatagtcg caaaagtacg gctttgattt cctacttcta aagaaagttt gataggttct
    25141 tttttctcca cagcattttt acaaagtgga agtaaaattc tataatcaat cgttttttca
    25201 agcttgttat ctttatagtc tttaaaatgc acagcggttc tattataagt aggcaaggat
    25261 tttaaaattt tatccaaatt tagctttcct gctttacctt gcacactttt ttgacggagt
    25321 ttatccacgc gacctatcat atcatctagg cgttcaaaac caagtcttgc catgtattct
    25381 ctaagctcct cagctataaa atacatgaaa ttaatcacat catctacttt gcccttaaaa
    25441 cgatctctaa gttctgtatc ttgagtagct ataccaaaag gacaggtatt tagatgacaa
    25501 actctcatca tcgtacaacc taaaacaatc aaaggcgcgg ttgcaaaacc aaattcttca
    25561 gctcctaaaa gtgccgctat ggctaaatca cgcccattca taagctttcc atcagtttct
    25621 aatcttaccc tatctctaag cttatttaaa atcaaagttt gatgtgtttc agccaaacct
    25681 aactcccaag gaattcccgc atgcggtata gaagttctag gacttgcacc tgtacctcca
    25741 tcataacctg aaacaaggat taaattcgct cctgccttag ccacacctgc agcaaccgtt
    25801 cctatgccat tttcgcttac aagttttact gaaattttag cgtctttgtt agcatttttt
    25861 aggtcataaa taagttgagc caaatcttct atagaataaa tatcatgatg aggaggtggg
    25921 gaaataagcg tcacacctgc agtagaatgt ctagccttag ctatccaagg atagacttta
    25981 aagcccatta attgtccgcc ttcacctggt tttgcgcctt gagcgacttt gatttgaatt
    26041 tcttttgcat gacttaagta gtttagatcc acgccaaaac gcccacttgc tacttgctta
    26101 atggctgagt ttttatccac accctctttg atttcatagc gttcttcatc ctcgccacct
    26161 tcacctgaat ttgatttagc acctatttta ttcatagcct gtgccaaaca ctcgtgtgct
    26221 tctttagaaa tagaaccata actcatcgcc cctgttctaa agcgtttaac tatactttct
    26281 acactttcaa ccttatctat actgatagct tcactaaaat caaattccat caaagaacgc
    26341 aaattaactt gtttttcatc tactaaagcc gagtattttt taaagctttt atagtctttg
    26401 ttgcgacagg cttgctgaag attaaaaatc acaagtggat caattaaatg ttcttcttta
    26461 gcacttctaa aaccatgaat tcctttagaa tctaaagcct tatgcgtatc gttaaaagca
    26521 tgtttgtgta aagcaataag ttctttttca aaatcttcta aatccatacc ttcgatgcgt
    26581 gaagttgtag aagtgaagta tttatcaatc accttagagc ttaagcccag acattcaaaa
    26641 agtgcagagc cattataact ttgcaaggta gaaactccca ttttagaagc aattttgact
    26701 atgccacttg aacttgcctt gatgaaattt tctaccgcct tttcataact taaatttaaa
    26761 tctttattgg caatgagttt ttgtatgctc tcataaacca aataaggatt aataacagtc
    26821 gcaccataac ctaaaagaca tgcaaaatga tgaatttctc taggttcacc actttcgatg
    26881 ataagacttg tatgtgttct taaatttttt cttactagat gattatgcac tccagaaaca
    26941 gcaagcaaag cagggatata agcgtttttt tcatccactc ctttatcgct taaaatgata
    27001 atagaaacac cttttttaac ctcatcttct atcttaacgc aaagttcatc taaagccttt
    27061 tctaaagttt ttttagaata atcataaagt atagaaaatt ctttaacttg aaatttattt
    27121 aaagccttaa cttcaaaaag ttcttcattg cttatcacag gcaaagctat ttttacgcgt
    27181 tttgcattgt tttcatcggg ttttaataaa ttgccttcgc ttcctagata aatccttgta
    27241 gaagtaacga tctcttctct tatggcatca agaggaggat tagttacttg tgcaaaaagt
    27301 tgtttaaaat aattatacaa aggttgataa gttttagaaa gtatagccaa aggagtatct
    27361 acacccatag ctgctatagc ttctttacca ttttgagcca tagcagccac actcatttta
    27421 agttcatcat aactccaacc aaaagctttt tggagtttta aaacctcatc ttcttttaaa
    27481 aactgatgtt tataaactcc gcttttttgt ttttcaagtt caactaaatt tttaagccat
    27541 tttttataag gcttagcatt agcataatgc tctttgattt cattatcagc tataacccta
    27601 cctcttgctg tatcaacgag taaaagtttt ccaggttcta agcgtttttt ggctttgata
    27661 tttttttcat caagttttaa agcccctgtt tcacttgaaa gtatgagcat atcatctttt
    27721 gtaagataat accttgaagg acgaaaacca tttctatcca aactcgcccc cataatcact
    27781 ccatcagtaa aaactatagc agcaggccca tcccaaggct ccatcaataa agaatgatat
    27841 tcataaaaag cacgcttttt gctttccata ttttcatttt tatgccaagg ttctggcacc
    27901 atcatcataa aagcttcttc taaagtacga ccatttagag ctaaaaattc taaagtatta
    27961 tcaaacattg cagaatcact gctaggctta gctatgatag gaaaaatttc atctaaattt
    28021 tcaaaatact cactttgcat caagccttct ctagctctta tgctatcaac atttccgcgt
    28081 atggtattaa tctctccatt atgcaccata taacggtttg gatgggctct ttcccaactt
    28141 gggaaggtat tagtcgaaaa gcgagaatgc accaaagcga tggctgattt catattgaca
    28201 tctttaaaat caagataaaa atcgctcaat tgagttgaaa gaaacattcc tttataaact
    28261 atggtgcgtg aagaaaaact tgaaaaataa aattttggca cattaatagc tcttttttct
    28321 ataaggcgac gcgtactata aagcactctt tcaaactcaa gtcctgcact tattttactt
    28381 ggttttttca caaaggcttg taaaaaataa ggcatagctt ttaaagcact tgcacctata
    28441 tcgctaggat taaaaggcac ttctctaaaa cctaaaaatt caagtttttt atcctttaaa
    28501 ccttgtaaaa atatctcttt tgcttcttct tttgcatcag tattgggtga taaaaacatc
    28561 tgtgctacgg cataatcacc ctttttagga agttcaaaac ccaattcttg agttttaaaa
    28621 aaatcatgtg gaatttggat caaaatcccc gccccatcac ctgaattttc ttcagctcct
    28681 gcaccacctc ggtgttcaag attcatcaaa atttctaaag catcacaaat aaccttataa
    28741 gaggcaatac cgcgtatatt agcaactgca gcgataccac aggcatcgtg ttcgttcttt
    28801 gggtgatata aacctatgct ttgattattt tctaggatat tttctaaatc cattttgctc
    28861 tccttaataa gactgattta aattttgtta gctttataag gattatagca tacatttttt
    28921 taaaatcgat ataattttta tcttaaaaat aaataaatta aaaaatattt tgatagattt
    28981 gtaaaaatta taaaaacatg gcgataatac tacctaaaat caataatggg ccattataga
    29041 aaataaaagt tggtatgcaa gtatctttaa tgtgatcgtg ttgtttatca gcatttaatc
    29101 ctacagtagt tcccatggtt gtttcactag ctggacttcc tgcatctcct aaagctcctg
    29161 ctactcctaa gataaatata ataagtgctg tactaaaacc aagttccaaa caaataggac
    29221 aaaaaagcgt agctatgata ggtatagttc caaaagaagt acctataccc atagtgatga
    29281 taagtcctat taaaagcatg aaaaatactg ctaaaaattt actttgctcc atccaaggaa
    29341 cgactgaatt tacaagatct actactgatc cactttcttt taaaacttct ccatatcctg
    29401 cagcaacaag gataacaaaa gctataaaac ccatcatttt aagcccatca tcaaaaactt
    29461 cattgacttt tgaaaattca actccaccca aaataaccat taaaacaaaa cccaaaagcc
    29521 ctgataaagg caaattcata gtcaaaattt gcaaaattaa agttaaaaca agcccagcta
    29581 aaacgcccca ttccttacgc gtcatttcaa gattttctaa atccacttta gcaatttcta
    29641 cttcttgata ctctcttggc ttacgataaa acacaaaaag cgctagaaaa agtcctgcta
    29701 tcatacaaat agcagcaaaa tacatagtat ttgtaacatc atttaaagat acacttacat
    29761 tatttgcatt taaattatct tttaaaagat cttgaaaagt aagcccaaaa cctactggca
    29821 aaaccatata aggcgtagta aggccaaaag ttaaagcaca agcaaccgct ctacgatcaa
    29881 ttttaagttt attaaaaaga cttaaaagag gtggaatcaa caaaggtata aaagctacat
    29941 gaataggaat taaattttga gaaaaacaag aaatcaaagc tatagacaaa agcaataaat
    30001 attttttatg agatataaaa tgacttacta tcttgatcaa atatgcagtt aaatttgtct
    30061 ttgaaatcgc tgcagcaatg gctcctaaga gtatatagct aagagctgtt tttaaatttt
    30121 ctttcattcc gcttataagt atattcatag tatctacgag ttcaagatga gaaaatacac
    30181 ctgcaacaag agctgagatc aaaagactca aaagcacatt aaaacgaaac aaacaaagta
    30241 aagtcatcaa aacaacactg ataatgatag gattagtaag taaagtcaaa atcattcctt
    30301 aaataatttt aaaaatttaa ttgtagaaaa aacttagtta aaatgtaata aaactcgaac
    30361 atataatgat tttattttaa tatgcaaaat tataaaaata atta
//
LOCUS       DAPWGO010000011        25700 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.011, whole genome shotgun sequence.
ACCESSION   DAPWGO010000011 DAPWGO010000000
VERSION     DAPWGO010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25700
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.011"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            108..482
                     /locus_tag="RJ336_000436"
     CDS             108..482
                     /locus_tag="RJ336_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDZ5212907.1"
                     /translation="MKMRVYYEDTDAGGVVYHSNYLKFCERARSEIFFNKKVDIFDAS
                     KGHFLLAKANCNFLKPAKLGDMIEIKTKILEVKNASVEILQEIYKDEILLFKMELTLA
                     FIKNEKPARMDMQLKKLFEELF"
     gene            complement(474..1664)
                     /locus_tag="RJ336_000437"
     CDS             complement(474..1664)
                     /locus_tag="RJ336_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212908.1"
                     /translation="MKKIFLIFFLSCFLLNAKEQKLVDVKPVENFYPKLSVQECNTNC
                     LFDLLESRLYLSFLSEFADQNDQFLSNVYAKLLNSITDFEKNVQKITSVKLAIIIPEK
                     TIKSYSNTIINSSIAYLLRQRAEIKVKVFLTGTEDSDKIRAALDAAQAQGYQYAIAGF
                     TLKGANELKNYSGNMKIFIPTIHKNNIQISNQNIIFGSIDYDAQIATLLSKSNANIAI
                     FSDGSALSSNLNSRILAQNNNARIYTIEGEKLDFSRLLRSQGGVNNASIFFNTPLIKT
                     ALASSQLRIYNIHPYVLLSTQINYNPTFLSLTQQGDRENFIIANSINNHDDNLVYLNE
                     IFNQSIDYNWIAYATSIGVDYFYTEFLNKKSESLFDEKIKNSQVDYKVRLMQGKQASF
                     EELK"
     gene            complement(1661..2269)
                     /locus_tag="RJ336_000438"
     CDS             complement(1661..2269)
                     /locus_tag="RJ336_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HDZ5212909.1"
                     /translation="MIRSLYYLKAMGFNFVDTHTNHFEQVQNFQELKQLVSSCTLCQF
                     SKTRKFSLMEPKIKNVKLLILDVFGQKSENESGILLNSKKGEKLKHYIYQILGLCDED
                     FYFSYLFKCFCNGKFDDFSLQSCLPFFWNELKLIQPAFLLCLGEYTFKSLGFKDYHIL
                     KGEIFAYKNFFIMPSYDLDFIEKNPSYEKNFIQDLKKIKGFL"
     gene            complement(2266..2745)
                     /locus_tag="RJ336_000439"
     CDS             complement(2266..2745)
                     /locus_tag="RJ336_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDZ5212910.1"
                     /translation="MSEFKIIDLRQEDLDILQEMIIEFAKYEDMLDFLQCTKEKLEHS
                     LLKNKFARAFLLKENEKTIGYMIYFYTFSSFWGSGGIYLEDIYIREDFRKKGYGKAVF
                     KFLGEICKKENLKRLDWVCLNDNILGINFYESLNAKHLKQWRNYRLSGENLEKLCDL"
     gene            2876..3010
                     /gene="rpmH"
                     /locus_tag="RJ336_000440"
     CDS             2876..3010
                     /gene="rpmH"
                     /locus_tag="RJ336_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDZ5212911.1"
                     /translation="MKRTYQPHGTPRKRTHGFRVRMKTKNGRKVINARRAKGRKRLAV
                     "
     gene            3007..3333
                     /gene="rnpA"
                     /locus_tag="RJ336_000441"
     CDS             3007..3333
                     /gene="rnpA"
                     /locus_tag="RJ336_000441"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDZ5212912.1"
                     /translation="MKNFDKFSTNEEFSSVYKVGKKWHCEGVIIFYLNSYEKKIAVVA
                     SKKVGKAVVRNRSKRILRALFAKFERYLQDGKYIFVAKNEITELSFSRLEKNLKWGLK
                     KLECFK"
     gene            3330..3671
                     /gene="yidD"
                     /locus_tag="RJ336_000442"
     CDS             3330..3671
                     /gene="yidD"
                     /locus_tag="RJ336_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDZ5212913.1"
                     /translation="MICLKILRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLA
                     FFSTFFRILRCNPFFKGGFDYPRVSKNFYPMNLCFKPIFLAKKQLCFLYIPYKNKSFY
                     LIKIIFKRTNQ"
     gene            3668..5260
                     /gene="yidC"
                     /locus_tag="RJ336_000443"
     CDS             3668..5260
                     /gene="yidC"
                     /locus_tag="RJ336_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDZ5212914.1"
                     /translation="MNNSNNIFQQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNIT
                     QQNQQNTSINNTPNIQNTTTNTPSAALVSQDSVISKVQSKHFEAQIDSFGRISAFYLK
                     DKKYQNEKGEFINLVSKENSPYPLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQV
                     LKLTQNLSGLKIEKDITFYPKGNYEIEVKLSKNANYFISPGYRPNIAVDSYTVHGALV
                     MDNKETIETYKDGDVEKDESANNVVMTSAFDRYYATFFYNFDKPLNVAISKDANKNPI
                     VFAYSDNEFKAGGYIGSKEHVILRSIDPRLEAVVEYGWFTFIAKPMFEFLNFLHQYIG
                     NWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDPQKMNMHMME
                     LYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFILP
                     ILMGVTMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLV
                     QQWVINKIFAKEHHKKQAEHEK"
     gene            5257..6075
                     /locus_tag="RJ336_000444"
     CDS             5257..6075
                     /locus_tag="RJ336_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Jag N-terminal domain-containing protein"
                     /protein_id="HDZ5212915.1"
                     /translation="MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRK
                     KAIIEAKAKKRILKKNPKKEFASSKNHKPETHEPKQENKIEIKNEKNKIQKEKYTVKS
                     DEIFDSFHRESKGVRNTQDILDEIRIQLVKLLESSQFKIELSELRMYNEDCVLIRLDG
                     EDAALMIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQSVIEK
                     IKIHGRGQTKPLDGVLIKIALEQLRAEFPDKYVGIKQNNDQRFVVINDFFKKDE"
     gene            6068..7396
                     /gene="mnmE"
                     /locus_tag="RJ336_000445"
     CDS             6068..7396
                     /gene="mnmE"
                     /locus_tag="RJ336_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDZ5212916.1"
                     /translation="MSDTIAAIATAHGVGSISIVRLSGERALEFALKLSHKTKLTPRH
                     ATFTKLFNQNNEIIDEAIMIYFKAPYSFTGEDIVEFQTHGGFSVSEVLLEELVSLGAR
                     LALAGEFSKRACLNGKMTPLKALNIQDLILSKSALAAKIIARNMQGNLGELLEKIRTD
                     LVKTLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIA
                     IVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESK
                     DAIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL
                     ENVFKNTQNKNFIKLSAQKDITLLKEELQNYLNSFDSEGIMVSSLDLINACKISSEAI
                     FRAKGLLEESSLELFAFELNLAINELARFTKDFQRDEILDEMFGNFCLGK"
     gene            7407..9593
                     /gene="purL"
                     /locus_tag="RJ336_000446"
     CDS             7407..9593
                     /gene="purL"
                     /locus_tag="RJ336_000446"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HDZ5212917.1"
                     /translation="MDKETIKAHKISDEEYAQILEILGREPNLLELGVISAMWSEHCS
                     YKSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMAAVFKVESHNHPSFIEPFAGAAT
                     GVGGILRDVFTMGARVVAGLNSLKFGDIHDEKCGKHQKYLVKGVVNGISHYGNCMGVP
                     TIGGECAFDECFNGNILVNAFALGVCKSEDIFYAKAEGVGNPVIYVGSKTGRDGLGGA
                     VMASDSFNEESKSLRPTVQIGDPFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSF
                     EMAGRSGSGMKLYLDKTPMRESGMTPYELMLSESQERMLICAKKGYEDKVIEIFKKWD
                     LDAVVMGEVTNTGKMELFWHDELVGLIPIEPLSEKAPILSRPTSEPKYLSEIKNYKFE
                     LKSSIQELFIQMLQNENINNKAFIYDQFDSSVQTNTIKADGKLGASVIRIKENGASVA
                     MAIECNSRLNYVNPKIGAALAVASAGRKVACTGAKPLAISDCLNYGNPQNPEVMWQFA
                     QGCEGIKEACKELNTPVVSGNVSLYNETEGVSIYPSPTIVSVGVLEDANKTLKASFEK
                     ENLSVYLLGESLGEFGGSMVMKIQDKKVSGSLKELDYKAELALWDLLYKANQNSLLEC
                     ANSVGIGGIAMTLAKMFAISSVGANLTSDFDDEKMIFDESASRAIIGLSKENEEAFLN
                     LAKEFGVKAYKLGVSTSQKHFKLDSIELSKAELDKLYFESFKEQIQ"
     gene            9590..10360
                     /locus_tag="RJ336_000447"
     CDS             9590..10360
                     /locus_tag="RJ336_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family molecular chaperone"
                     /protein_id="HDZ5212918.1"
                     /translation="MTLVLIILVVLVFYWYYKTWGKQDFLNSATRGAKGFAKGFARGV
                     MEERMDEFKRRMNYYVIALLAKIAKSDGRVSENEAEMIKDLLDANAKDEKERAFLKAS
                     FNEHKENLSDAFYVAKDFLKEVPLPKNERFNVLRVLVFMALIDADFNAKKREILEQIA
                     KAFDIAKSELDAFIASLSNLKSTKKELSLDEAFAILELPNNADLNAVKKQYRNLAKKY
                     HPDILNANNVSEEELKIGVEKFQKINEAYEKVKKHLER"
     gene            10363..11895
                     /gene="purH"
                     /locus_tag="RJ336_000448"
     CDS             10363..11895
                     /gene="purH"
                     /locus_tag="RJ336_000448"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDZ5212919.1"
                     /translation="MRALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGIKV
                     IEVSDFTKSPELFEGRVKTLHPKIHGGILHKRSDENHIKQAKENEILGIDLVCVNLYP
                     FKKTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDPLDYEKVIETLKKGQND
                     ENFRLNLMIKAYEHTANYDAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKG
                     ALYEFDAFFRANFKALKSEASFNNLTDINAALNLASSFDKAPAIAIVKHGNPCGFAIK
                     ENLVQSYIHALKCDSVSAYGGVVAINGTLDEALANKINEIYVEVIIAANVDEKALAVF
                     EGKKRIKIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEVGEDELKNAKLMSQREASK
                     EELKDLEIAMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAAIAKAKEMGLDLQ
                     GCVLASEAFFPFRDSIDEASKVGVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRHF
                     LH"
     gene            11994..13586
                     /locus_tag="RJ336_000449"
     CDS             11994..13586
                     /locus_tag="RJ336_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HDZ5212920.1"
                     /translation="MFKTIGFKVSAAIFVVLLISFIVMQVILNLDFKNTANKMSRANL
                     DTVSTSVFQTMRMAMNLGDPEKIKEAIEDAKSIEGISDIKIYPSKDTIDLFEMKAPQI
                     SNDKRIIEQFSNPKIQALEENVNGVVHLRLIRPLIADESCVACHANANVGSVIGVMDI
                     SHSLEGVQKDISKTSQSYIIIFTIALIFTLCVVLLMLKVVVGKPVLELLNHAKELAQG
                     SGNLKARISVKGQDEIALACGYINQFIEKTHKAVSGASHNSKNVEKQSNLLNSNAISL
                     SDISSQSHKQIDQSFKLGANVGNELGELASLSNKANSANEKSFLLLEQMLKSLFNVAN
                     KVSTVSQNENELAKKVENMVNQAGNIQKATQMMDEIADKTNLLSLNAGIEAARAGAFG
                     RGFSVIAEDVRQLAQNSEEFLGNVAQITKELLQSINEVSAELKKNAQSVQALNDDTAL
                     LVDDANEVKLCNEDARALVTQCTEKIKISQENIQNLLSRMQENVEVSEKNEEISKILL
                     QVADELKIVCHNLESELNQFQI"
     gene            13596..14030
                     /locus_tag="RJ336_000450"
     CDS             13596..14030
                     /locus_tag="RJ336_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HDZ5212921.1"
                     /translation="MKKTLQIALAATFFAGCASTSVTSSTSKGNNELAQNQLFKIEKI
                     IVNGKTFDPKNAEESPNISFENNKFYGYSGCNRFFGSYQTKADTLQIEGDRVASTQML
                     CHPMDVMDFENSFLSNFKGTFKISNENGKLVLSNDEMKIFFK"
     gene            14129..15106
                     /locus_tag="RJ336_000451"
     CDS             14129..15106
                     /locus_tag="RJ336_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HDZ5212922.1"
                     /translation="MIKSIPEWSEQEYLMLSLPHEKSDWNPYLEEILQSYKEFVKAVS
                     EFQKVLLIAPKQSDFENFKDIKNVEYFKCDTNDTWIRDFGAIDIVENGHLKALDFTFN
                     AWGNKFQSELDNAVNSKLFKEKFKEELKKVDFILEGGSIDFNGEGVMLTSSHCLLNEN
                     RNSHLNKTQIDIKLKEIFGLKQIIWLENGFIKGDDTDHHIDTLARFIDKNTIAHCICE
                     DEEDEHYLPLQKMKEELKKTGFDLVELPIPQPLYYKGRRLGATYANFVFVNNALIVPF
                     YKDKNDEIIAKRLSKALPSHKIIGVDARVFLRQNGSLHCSCQNRFKGLR"
     gene            15103..15990
                     /locus_tag="RJ336_000452"
     CDS             15103..15990
                     /locus_tag="RJ336_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDZ5212923.1"
                     /translation="MSLQKKATLVASLCAIVLALVKFIVGLTSGSVAVLSSAIDSLMD
                     FAISAFNFLALKKSSQKANENYNFGFSKIEALMGLLEGVFIVGVGIFIFYESILKIYY
                     KEEIKDLNSSIYVMIFALIMTFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTL
                     GALVLIYFTNLHIIDAIFGIVISLYTAFSAFKIIKKALAFLMDEALPKEQVDKICTLI
                     SNNPEIISYHELKTRKTPSCNYLSVHLVFCPIISLLNAHKISDEIEEGVRKMFENEKW
                     DIQIHLDPYDDAEQERQRQ"
     gene            15987..16859
                     /locus_tag="RJ336_000453"
     CDS             15987..16859
                     /locus_tag="RJ336_000453"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidohydrolase"
                     /protein_id="HDZ5212924.1"
                     /translation="MKIALIQQKFHSNKEQTIKKTCEFIEEASKQGAELVCLGELHQS
                     EYFCQSENVDFFDYANDYEKDVKFWANIARKNQIVLITSLFEKRSAGLYHNTAVVFEK
                     DGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARI
                     MALKGAEILIYPTAIGWFDKDKDEEKQRQLNAWLGVQKGHAIANGLYVVAINRVGFEK
                     DVSGVEEGIRFWGNSFVFGPQGEELCLLDSQNECIKIIEIDKKRSENVRRWWPFLRDR
                     RIEYFADLTKRFID"
     gene            complement(16871..18217)
                     /locus_tag="RJ336_000454"
     CDS             complement(16871..18217)
                     /locus_tag="RJ336_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDZ5212925.1"
                     /translation="MKSCLYFTFIVLFLTACSTKNLTSLHHENLEQKNENQHYAKLEY
                     EQNVSILPQFAYDINFDAKRYKKYFFNPWHDSFKNYKGQNIFWSFPLYLNSKNTYYFF
                     NKQIIPLSWFKNATNNANIQEFGKLNQKALIIQNTIIKNLPTQRAILKNPFFENEGIP
                     FDYASDGILNAGTPVLISHFSKDKRYAFVLGEAGFGFVESKNLEFFSNDRAKIYENLN
                     FITPLKEKFPIYSEDGKFFFESRIGAIYPYYKEDKNYFYGKIGSKKYKISKKDVSKFP
                     LQFNDKNLKNQLSQVLNLPYGWGGYNFERDCSLLTRDIFSAFGLYLPRNSAAQKNSFN
                     HFDISTLSNSQKKDFLNRFGKAYLSLLYLPGHIMLYVGQIADNNIAIHNIWGLRKDTT
                     QRLLISSSVITSLEIGKNEILEDNLLLSRLKEISFINLNEQEKEQIKSYLENIQNK"
     gene            18266..19609
                     /gene="pif1"
                     /locus_tag="RJ336_000455"
     CDS             18266..19609
                     /gene="pif1"
                     /locus_tag="RJ336_000455"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase Pif1"
                     /protein_id="HDZ5212926.1"
                     /translation="MLDKLEKILAYDNVFLSGGAGVGKSFLTNELIKSYRKQKKLAIA
                     LGSSALSAFNIGGVTLHSFFCLGYCDDMMKLSALDRNQKQKEKLTKLKELLKTIELII
                     IDEISMVSASVFEMIGFRLKNSQFNGKILVVGDFFQLPPVIKEKKETLFNHSYYAFSS
                     FFWQDLNFKNIKLSQPKRTQNMEFYNYLSLIRQGFLDEKILSFFESLRIDYKELENLE
                     DDYTLLCGINKKVNNINQEKLSKLETPLVCFKAQVKKEDKRIKDEELDSWVGSLNILE
                     ELNIKIGARIIFCVNNWDKNYYNGEQGIIEDILYEEEKIYISIIKNNGMKILLEPYTF
                     FMEELEQSGKDFVVNILASVTQFPIKLAYAITIHKSQGMSIEKLVCDIDHIFENGQLY
                     VALSRATNPNTLKIYSTKKINFGFYFANILKIDSNVIEFYKKHNFLDLEIQEQII"
     gene            19619..20353
                     /locus_tag="RJ336_000456"
     CDS             19619..20353
                     /locus_tag="RJ336_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212927.1"
                     /translation="MKKIFLSVFLALSLNAQNLEIDKIRTDLYSKSGANVLKKVEISL
                     KFDGNNLKENENKLIDAVNTVISGFFYEDIFTEIGKNNFKKTLEKFLDKKYKIKLDDI
                     YIISLSGVEKFDLEEFKRFLESTEAKEKGMGSEVKKALENLEVPKTQVPGVEKIPTPS
                     VPNLEAKQVEQLFKDSDEENKNDNGEINIDNLNTPKMTPDIEEKIKRDLIANPPQIFK
                     ENNASKPYHLPQTGYDIKLDENSTQN"
     gene            complement(20350..20859)
                     /gene="lolA"
                     /locus_tag="RJ336_000457"
     CDS             complement(20350..20859)
                     /gene="lolA"
                     /locus_tag="RJ336_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDZ5212928.1"
                     /translation="MKKTFLIFFIFIGQLFALDLNFNTFSSDFIQIVKSKNSTLSYSG
                     HFILSKDQAYWSYDTPSKKEIYINKNQVTIVEHDLEQVIFSHLDNIPNLNEIFKKASL
                     IDKDKLVAKYDNINYTIKLNQEQIQSISYKDEFENDVIINLNNQIKNPKINSDVFKAK
                     IPQNYDIVR"
     gene            20960..23548
                     /gene="secA"
                     /locus_tag="RJ336_000458"
     CDS             20960..23548
                     /gene="secA"
                     /locus_tag="RJ336_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDZ5212929.1"
                     /translation="MFLNTLKAVFGTKNDREVKKYFKRVAQINALEGKYQNLSDDELK
                     AEFAKFKEQILSGEKNENDILNDVFAIVRETGKRTLNMRHFDVQLIGGMVLHDGKIAE
                     MKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVILS
                     SQNSDIEHKQAYDCDITYGTNNEFGFDYLRDNMKFSKVEKVQREHNFVIVDEVDSILI
                     DEARTPLIISGPTNRTLDGYIKANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRNILIT
                     EAGIAKAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDVHYVLRNNEVIIVDEFT
                     GRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYNKLAGMTGTAQTEA
                     TEFSQIYSLDVISIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANSKGQPVLVGT
                     ASIERSEVFHNMLVKEKIPHHVLNAKNHEQEALIIQDAGKKGAVTIATNMAGRGVDIK
                     IDDEIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGD
                     RIKNIMDRLGIEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTI
                     YRYRNELLDENYDIRAKISQNIAEYSANVMNDYMLDESGSNVNFENLKAKILYECSTQ
                     ISEKDFENLSVIEMQDKLSQILENSYNEKMSRLGIKELRNIERILYLQVLDNAWREHL
                     YQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVQFNQEEVQ
                     NLENKANEENEKLLQSSVEMGASEDNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGP
                     KQGILA"
     gene            23545..24750
                     /locus_tag="RJ336_000459"
     CDS             23545..24750
                     /locus_tag="RJ336_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ5212930.1"
                     /translation="MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVA
                     MAIMNGFDKEFEKRFFVMNYPITILPKFYAPVNDEFIDELRKTFPNLLFSPYISTQVV
                     VKGDNRFEGGVLFGVNFNDEKKINEVVAKALRDENLSGFDILVGSALIDEFGLHKNDK
                     LSLIFSNLNPSGFSLVPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGMPKNPN
                     YDGIHVYSDNAFKDVEKIKSYLKDDYAVVGWWEQNKNFFSALELEKRALFIVLMLIIL
                     VASLNIVSSLLMIVMNRRSEIALLLALGASKNEVKKSFFALGMLIGGGGMIVGVVLAF
                     FALWLLGNFDIVTLPADVYGTSKLPLDLSLMDFSLTIVGALIIIALSSFYPAKKATQI
                     NILDTLRNE"
     gene            24773..25558
                     /locus_tag="RJ336_000460"
     CDS             24773..25558
                     /locus_tag="RJ336_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDZ5212931.1"
                     /translation="MSLFTQKNKNFKPLKPLSKSKIITNLILLILFLILFCYCSFSIS
                     AYHFDFSVIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFLSTF
                     YIELIRGTPLLVQVLLMYYIIANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSIS
                     ISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQ
                     SAQEINSYTFATLEAYVILAITYLILTLPISIFSRYLERKCQK"
     gene            25620..25695
                     /locus_tag="RJ336_000461"
     tRNA            25620..25695
                     /locus_tag="RJ336_000461"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:25653..25655,aa:Lys,seq:ttt)
BASE COUNT         9202 a         3159 c         4612 g         8727 t
ORIGIN      
        1 ttaagattgg acggaatttt ttaatataaa ctaaaaagcg atatcaaaga atttccgttg
       61 tataatccaa tgttttttaa atgtaaaata ttttttaagg taaagcgatg aaaatgcgtg
      121 tgtattatga agatactgat gcgggtggag tggtgtatca tagtaattat ttaaaatttt
      181 gcgagagagc aagaagtgaa atttttttca ataaaaaagt agatattttt gatgcgtcta
      241 agggacattt tttgcttgca aaagcaaatt gtaatttctt aaaacctgca aaacttggag
      301 atatgataga gattaaaaca aaaattttag aagtcaaaaa tgcttctgtg gaaattttac
      361 aagaaattta taaagatgaa attttgcttt ttaaaatgga attaacttta gcttttatta
      421 aaaacgaaaa accagctaga atggatatgc agttaaaaaa gctctttgaa gaattatttt
      481 aattcttcaa agcttgcttg tttgccttgc ataagacgca ctttgtaatc aacttgagaa
      541 tttttgattt tctcatcaaa taaactttcg ctttttttat ttaagaattc ggtataaaag
      601 taatcaactc ctatactagt agcataagca atccagttat aatctatact ttgattaaaa
      661 atttcattaa gatagactaa gttatcatcg tggttattga tggaattagc aatgatgaaa
      721 ttttctctat ctccttgttg tgttaaactt aaaaatgttg gattatagtt gatttgagtg
      781 gataaaagca cataaggatg aatgttataa attcttagtt gagaacttgc tagagctgtt
      841 ttgatcaatg gagtgttaaa aaatattgag gcattattaa ctccaccttg tgatcttaaa
      901 agcctgctaa aatcaagctt ctcgccttct atggtatata ttctagcatt attattttga
      961 gcaagaattc ttgaatttag attgcttgat aaagcagagc catcgctaaa tattgcgata
     1021 ttagcatttg atttgcttaa aagtgtggca atttgagcat catagtcaat acttccaaaa
     1081 ataatatttt gatttgaaat ttgtatgttg tttttatgga tagttggtat gaaaattttc
     1141 atatttcctg agtaattttt caactcgtta gcacctttta gagtaaatcc agctatggca
     1201 tactgatatc cttgagcttg tgctgcatca agtgcggctc ggattttatc actatcttct
     1261 gtgccggtta aaaaaacttt tactttgatt tcagctcttt gtcttaaaag ataagctatg
     1321 cttgaattta ttatagtatt tgagtaactt tttatagttt tttctgggat aattatcgca
     1381 agtttaacag aagtaatttt ttgaacattt ttttcaaaat cagtaatgga atttaataat
     1441 tttgcataaa cattagatag aaattgatcg ttttgatctg caaattcact taaaaaactg
     1501 agatacaatc ttgattctaa aagatcaaaa agacagtttg tgttgcattc ttgaacgctt
     1561 aatttaggat aaaaattttc aacaggtttt acatcgacta atttttgctc ttttgcatta
     1621 agcaaaaagc aagataagaa aaatattaga aatatttttt tcataaaaat cctttaattt
     1681 tttttaaatc ttgtatgaaa tttttttcat aacttggatt tttttctata aaatctaaat
     1741 cataacttgg cattatgaaa aaatttttat aagcaaaaat ttcacctttt aaaatgtgat
     1801 aatctttaaa tcccaagctt ttaaatgtgt attctcctag acaaagcaaa aaagcaggtt
     1861 gaatcagttt tagttcgttc cagaaaaatg gtaagcaaga ttgtagcgaa aaatcatcaa
     1921 attttccatt acaaaaacat ttaaatagat aagaaaaata aaaatcttca tcgcaaagcc
     1981 ctaaaatttg ataaatatag tgttttaatt tttcaccttt ttttgaatta agtaaaattc
     2041 cactttcatt ttcactcttt tgcccaaaaa catcaagaat tagcaatttg acatttttta
     2101 tcttaggctc cataagacta aattttcttg ttttggaaaa ttggcataag gtgcaagatg
     2161 aaacaagttg ttttaattct tgaaaatttt gtacttgttc aaaatggttt gtatgtgtat
     2221 caacaaagtt aaaccccata gcttttaaat aataaagact tcttatcata aatcacacaa
     2281 tttttctaaa ttttctccac ttagacgata atttctccat tgtttaagat gtttagcgtt
     2341 taaactttca taaaaattaa tacctaaaat attatcattt aagcaaaccc agtcaagtct
     2401 ttttaaattt tcttttttgc aaatttctcc taaaaattta aaaacagctt ttccataacc
     2461 ttttttacga aaatcttctc gtatataaat atcttcaagg taaattccac cgctgcccca
     2521 aaaagacgaa aaagtataaa aataaatcat atagcctata gttttttcat tttcttttaa
     2581 caaaaaagca cgagcaaatt tattttttag taaagaatgt tccagttttt ctttcgtgca
     2641 ttgaagaaaa tctaacatat cttcgtattt tgcaaattct atgatcatct cttgtaaaat
     2701 atctaaatct tcttgtctta aatcaataat tttaaattct gacattttta accttttaaa
     2761 aataatttca aaatttatca aaagaattta aaaattactc ttaatcaaaa gcaatttata
     2821 agtaagatta agataaaata caagtttatt ttataatttt ttaaggaaaa atcaaatgaa
     2881 aagaacttat cagccacatg gcactccaag aaaacgcact catggtttcc gtgttcgtat
     2941 gaaaactaaa aatggtcgca aggtgatcaa tgcaagacgc gctaaaggta gaaaaagact
     3001 tgctgtgtga aaaattttga taaatttagc acaaacgagg aattttcatc tgtatataaa
     3061 gtaggtaaaa aatggcattg cgaaggtgtg atcatttttt atctgaatag ttatgaaaaa
     3121 aaaatagcag ttgttgctag taaaaaagtt ggaaaagcag tggttagaaa tcgttcaaaa
     3181 cgaattttaa gggctttgtt tgctaagttt gaaagatatc ttcaagatgg caaatatatt
     3241 tttgtagcta aaaatgaaat cactgaactt tctttttcta ggttagaaaa aaatctaaaa
     3301 tggggattga aaaaactaga atgtttcaaa tgatatgcct aaaaatactc cgtttttatc
     3361 agaaattctt aagcccttta aaacccgctg cttgtaggta ttatcctagt tgttctgagt
     3421 atgcgctttg gcagtttcaa aaaaagaatt tttttctagc ttttttttct acttttttta
     3481 gaattttaag atgtaaccct ttttttaaag ggggttttga ttatcctaga gtttctaaaa
     3541 atttttatcc tatgaattta tgttttaagc ctatattttt agcaaaaaaa caactttgtt
     3601 ttttatatat accttataaa aataaaagtt tttatcttat aaaaatcatc tttaaaagga
     3661 caaatcagtg aataattcaa ataatatttt tcagcaaaag cgtatacttt tggctgttgt
     3721 gatttctttt ttattttttg ttgtttatga ttattttttc attccaaagc aacctttaaa
     3781 aatagaacaa aacattacac aacaaaatca acaaaacaca agcataaata acactcctaa
     3841 tatacaaaat accaccacaa atactccaag tgcagcttta gtttcgcaag atagtgtgat
     3901 atctaaggtt caaagcaagc attttgaagc acaaattgac tcttttggta gaatttctgc
     3961 tttttattta aaagataaaa aataccaaaa tgagaaagga gaatttataa atcttgttag
     4021 caaggaaaat agtccttatc ctttagaaat gcgttttagt gatccaagta ttaactcaga
     4081 ggcttttaaa attccttatg ttgctaacgc tagcaatctt tttgttgatg aaaatggaag
     4141 tcaagtttta aaactcactc aaaatctttc tggattgaaa atcgaaaaag atattacttt
     4201 ttatccaaaa ggaaattatg agatagaagt taaactcagc aagaatgcaa attattttat
     4261 aagtccagga tatcgtccaa atattgccgt agatagttat acagttcatg gtgctttggt
     4321 aatggataat aaagaaacca tcgaaactta taaagatgga gatgtagaaa aggatgaaag
     4381 tgctaataat gtcgtaatga cttcggcttt tgatagatac tatgcaactt tcttttataa
     4441 ttttgataaa cctttaaatg tggcaattag caaggatgct aataaaaacc ctatagtttt
     4501 tgcttatagt gataatgaat ttaaagcagg gggttatata ggttctaaag aacatgtgat
     4561 tttaagaagt atagatccac gccttgaagc agttgttgaa tatggttggt ttacttttat
     4621 tgctaagcct atgtttgagt ttttgaattt cttgcatcag tatataggaa attggggttg
     4681 ggctatcgtt gtgatgactt taattgtgcg tattatttta ttcccgctaa cttataagtc
     4741 tatgatttct atgaataaac ttaaagatct tgctcctaaa atgaaagata ttagagagcg
     4801 ttacaaaggc gatccacaaa aaatgaatat gcacatgatg gagctttata aaaaacatgg
     4861 tgcaaatcct atgagtggtt gtttgcctat acttttacaa attcctattt tctttgctat
     4921 ttatcgcgtt ttgcttaatg ctattgagtt aaaagcagct ccttgggcgt tttggataca
     4981 tgatttatcg gtaatggatc cttattttat tttgcctatt ttaatgggtg taacgatgtt
     5041 tttacaacag cttattacac ctatgactat acaagatcct atgcaagcta agattatgaa
     5101 atttttacca gtgattttta cttttttctt tatcactttc ccagcaggac ttacgcttta
     5161 ttggtttgta aataaccttt gttctttggt tcaacaatgg gttatcaata aaatatttgc
     5221 caaagaacat cacaaaaaac aagcggagca tgaaaaatga aaatcgaagc cattgatctt
     5281 caaagtgcct taacagaagc ttcaagaagt ttagaatgtt ctgtgatgga cttagaatat
     5341 gagattattc agcatccaag aaaaggtttt tttggatttg gaagaaaaaa ggcaattata
     5401 gaggctaaag caaaaaaaag gattttgaaa aaaaatccta aaaaagaatt tgcaagttca
     5461 aaaaatcaca aaccagaaac acatgagcca aaacaagaaa acaagattga aataaaaaat
     5521 gaaaaaaata aaattcaaaa agaaaaatac acagtaaaaa gtgatgaaat ttttgatagt
     5581 tttcatcgag aaagcaaagg agtgcgtaat actcaggata ttttagatga gattcgtatt
     5641 cagcttgtaa aacttttaga aagctcccag tttaaaatag agcttagtga acttagaatg
     5701 tataatgaag attgtgtttt gattcgattg gatggggaag atgctgcttt gatgataggc
     5761 aaagaagcgc atcgttacaa ggctatttct tatcttttgc ataattggat caatttaaaa
     5821 tataatcttt tagtacgcct tgagatcgct caatttttag aaaatcaaat tcaaggtatg
     5881 cagctttatt tacaaagcgt gattgaaaaa attaaaattc atggacgcgg acaaaccaaa
     5941 cctttagatg gggttttgat aaaaattgct ttagagcagt taagagctga atttccagat
     6001 aaatatgtag gaattaagca aaataatgat caaagatttg ttgtaataaa cgactttttc
     6061 aaaaaagatg agtgatacta tagcggctat tgccacagct catggtgtgg gttcgatttc
     6121 tattgtaaga ttaagcggtg aaagggcttt agaatttgcc ttaaagctta gccacaaaac
     6181 caaactcacc ccccgccatg ctacttttac aaaacttttt aatcaaaata atgaaattat
     6241 tgatgaagct ataatgatat attttaaagc cccttatagt tttacagggg aagatatagt
     6301 agagtttcaa actcatggag gatttagtgt gagtgaagtt ttactcgaag aacttgtaag
     6361 tttaggagca agacttgctt tagcagggga atttagcaaa agagcgtgtt taaatggtaa
     6421 aatgactcct ttaaaagctt taaatataca agatctcata ctttcaaaat ctgcacttgc
     6481 agctaaaatt atagcacgca acatgcaagg aaacttagga gaacttttag aaaaaattcg
     6541 cacagatttg gttaaaacct tggcttttgt agaaactagc attgattatg ctgatgatga
     6601 tttaccttct gatttattag agcaaatttc tactatgtgt gaagaaaatt ctaaaatttt
     6661 aaaagaaatt tatacgcttt ctcaaagcaa aaaaggactc atagaaggtt ttaaaatcgc
     6721 tattgtaggt aagccaaatg taggcaaatc ttcgctttta aatgccttgc tttcttatga
     6781 aagagctatt gtttcagata tagcaggcac cactcgtgat actatagaag agagctttaa
     6841 attaggaacg catttattac gcattataga tacagcgggt attagggaaa gtaaagatgc
     6901 tatagaacaa atcggcgtag ctttaagtaa aaaaagttta gaagatgcag atattatttt
     6961 ggcagtcttt gatgcttcaa gagtgcaaga taaagaagat gagaaaattt ttgacttatt
     7021 agcaaatact gataaaaaaa tcttttggat tttaaataaa agtgatttag aaaatgtttt
     7081 caaaaatact caaaataaaa attttatcaa gcttagtgct caaaaagata tcactttgtt
     7141 aaaagaagaa ttgcaaaatt atcttaattc ttttgatagc gaaggtatta tggtaagttc
     7201 tttagatctt attaatgctt gcaaaatttc aagtgaagcg atttttagag ctaaaggact
     7261 tttagaggaa agttctttag aactttttgc ttttgaactt aatttagcta ttaatgaact
     7321 tgcaagattt accaaagatt ttcaaagaga tgaaatttta gacgaaatgt ttggtaattt
     7381 ttgtttagga aaatgaaagg ataaaaatgg ataaagaaac cataaaagca cataaaatca
     7441 gcgatgaaga atatgcacaa attttagaaa ttttaggacg agaaccaaat ctgttagaac
     7501 ttggggttat ttctgcgatg tggagtgagc attgctctta taaatccagt aaaaaatatc
     7561 ttaatggttt tccaactaaa gcaccttggg tgattcaagg cccaggagaa aacgcagggg
     7621 ttattgatat cgggcaaggt atggcagcag tttttaaagt agaaagtcac aatcatccta
     7681 gctttatcga accttttgca ggtgcggcta caggagtagg gggaattttg cgtgatgttt
     7741 ttactatggg tgcaagagtg gttgcggggc taaattcttt aaaatttggc gatattcatg
     7801 atgaaaaatg tggcaaacat caaaaatacc ttgttaaagg cgtggtaaat ggaatttctc
     7861 attatggaaa ttgcatgggt gtgccaacta taggtggaga atgtgctttt gatgagtgtt
     7921 ttaatggaaa tatcttagtt aatgcctttg ctttaggggt ttgtaaaagt gaagatatct
     7981 tttatgctaa ggctgaaggt gtaggaaatc ctgtgattta tgtgggttca aaaacagggc
     8041 gtgatggact tggtggagcg gttatggcaa gtgatagctt caatgaagaa agcaaatctt
     8101 tgcgtcctac agtgcaaatt ggcgatcctt tcagtgaaaa acttcttatg gaggcttgtt
     8161 tagagctttt taaaaccgat tatattgtgg gtattcaaga tatgggtgct gcagggctta
     8221 cttcaagttc ttttgaaatg gcaggaagaa gtggcagtgg catgaaactt tacttagata
     8281 aaactcctat gcgtgaaagc ggtatgactc cttatgagtt aatgcttagc gaatctcaag
     8341 aaagaatgct tatttgtgcg aaaaaaggct atgaagataa ggttatagaa attttcaaaa
     8401 aatgggattt agatgctgtg gttatgggtg aagttaccaa tacaggaaaa atggagcttt
     8461 tttggcatga tgagcttgta gggcttattc ctatcgagcc tttaagtgaa aaggcaccga
     8521 ttttaagccg tcctacaagc gagccaaaat atttaagtga aattaaaaat tataaatttg
     8581 agttaaaatc aagcattcaa gagcttttta tacaaatgct tcaaaatgaa aatattaata
     8641 ataaagcttt tatttatgat caatttgatt caagcgtgca aaccaatacc ataaaagctg
     8701 atggaaaatt aggtgctagt gttattcgta tcaaagaaaa tggtgcaagt gtggctatgg
     8761 ctatagaatg taattcacgc ttaaattatg taaatcctaa aataggagca gctttagcag
     8821 tagcttctgc aggaagaaaa gttgcttgca caggagctaa gcctttggca ataagtgatt
     8881 gtttaaatta tggaaatccg caaaatcctg aagtgatgtg gcaattcgca caaggttgcg
     8941 aaggtattaa agaagcttgt aaagagttaa atactccagt agtaagcggc aatgtttcac
     9001 tttataatga aactgaaggc gtaagtattt atccaagtcc tactatagta agcgtagggg
     9061 ttttagaaga tgcaaataaa accttaaaag ctagttttga aaaagaaaat ttaagcgttt
     9121 atcttttggg tgaaagttta ggagaatttg gcggatctat ggtaatgaaa atccaagata
     9181 aaaaagtatc aggaagtctt aaagagcttg attataaagc tgaacttgca ctttgggatt
     9241 tgctttataa agccaatcaa aattctttac ttgagtgtgc caatagcgta ggaatagggg
     9301 gtattgctat gactttggca aaaatgtttg ctatttctag tgtgggtgca aatttaacaa
     9361 gtgattttga tgatgaaaaa atgatttttg atgagagtgc aagtcgtgct ataatagggc
     9421 ttagtaaaga aaatgaagaa gcttttttaa atttagctaa agaatttgga gtaaaagctt
     9481 ataaattagg tgtgagtaca agccaaaaac attttaaact tgatagcatt gagttaagca
     9541 aggctgaact tgataagctt tattttgaaa gttttaaaga gcaaatccaa tgactttagt
     9601 tttaattata ctcgttgttt tggtgtttta ctggtattat aaaacttggg gaaaacagga
     9661 ttttttaaac tcagctacaa gaggagccaa aggctttgct aagggttttg ctcgtggggt
     9721 tatggaagaa agaatggatg agtttaaaag gcgtatgaat tactatgtta tcgcactttt
     9781 ggcaaaaatt gcaaaaagcg atggcagggt aagtgaaaat gaagctgaaa tgatcaaaga
     9841 tcttttagat gcaaatgcca aagatgaaaa agaaagagct tttttaaaag caagttttaa
     9901 cgaacataaa gaaaatttaa gcgatgcttt ttatgtggca aaagattttt taaaagaagt
     9961 gcctttgcct aaaaatgagc gttttaatgt cttgcgtgtg cttgttttta tggctttaat
    10021 cgatgcagat tttaatgcta aaaagcgtga aattttagag caaatcgcta aagcctttga
    10081 tatagcaaaa agcgagctag acgcttttat agcaagtctt tcaaatttaa aaagtactaa
    10141 aaaagaatta agtcttgatg aagcttttgc tattttagaa cttccaaata atgcggattt
    10201 aaatgcggta aaaaaacaat accgcaattt agcaaaaaaa taccatcctg atattttaaa
    10261 tgcaaacaat gttagcgaag aagagcttaa aatcggcgta gagaaatttc aaaaaatcaa
    10321 cgaagcttat gaaaaagtta aaaaacattt agaaaggtaa aaatgagagc attacttagt
    10381 gtgagtgata aagaaggcat agtagaattt ggcaaagagc ttgaaaattt aggttttgag
    10441 attctttcaa ctggggggac ttttaagctt ttaaaagaaa atggaataaa agttatagaa
    10501 gtgagtgatt ttacaaagag tcctgagctt tttgaagggc gtgtgaagac tttgcaccct
    10561 aagattcacg gtgggatttt gcataaaaga agcgatgaaa atcatatcaa acaagcaaaa
    10621 gaaaatgaaa ttttaggcat tgatctagtt tgtgtaaatt tatatccttt taaaaaaact
    10681 accattatga gcgatgattt tgatgaaatt atagaaaata tcgacatagg cggacctgcg
    10741 atgataagaa gtgcagcaaa gaactataaa gatgtgatgg tgctttgcga tccacttgat
    10801 tatgaaaaag tgattgagac tttaaaaaaa ggtcaaaatg atgagaattt tcgtttaaat
    10861 ttgatgataa aagcttatga gcatacagca aattacgatg cttatattgc aaattatatg
    10921 aatgaacgct ttaacggagg ttttggagcg agtaaattta tagtaggaca aaaagtattt
    10981 gatacaaaat atggagaaaa tccacatcaa aaaggggctt tatacgagtt tgatgccttt
    11041 tttagagcaa atttcaaagc ccttaaaagc gaagcaagtt ttaacaatct aaccgatatt
    11101 aacgcagctt taaatttagc tagtagtttc gataaagctc cagctattgc tatagtaaaa
    11161 catggaaatc cttgcggttt tgctataaaa gaaaatttag tacaaagcta tatacatgct
    11221 ttaaaatgcg atagcgtcag tgcttatgga ggagtggttg caatcaatgg aactcttgat
    11281 gaggctttag caaataaaat caatgaaatt tatgtagaag taatcattgc agccaatgta
    11341 gatgaaaaag ctttagccgt gtttgaaggt aaaaaacgca ttaaaatttt cactcaagaa
    11401 agtccgtttt taattcgcag ttttgataaa tatgatttta aacatattga tgggggtttt
    11461 gtatatcaaa acagcgatga agtaggcgaa gatgagctta aaaatgcaaa gcttatgagt
    11521 caaagagagg caagtaagga agaattaaaa gatcttgaaa tcgctatgaa aatagcagca
    11581 tttaccaaat caaacaatgt tgtttatgta aaaaatggcg ctatggtggc tataggtatg
    11641 ggtatgacaa gtagaatcga tgcagcaaag gcagcaatcg ctaaagctaa agaaatggga
    11701 cttgatttgc aaggttgcgt tttagcaagt gaagcctttt ttccttttag agatagcata
    11761 gatgaagcaa gtaaagtagg ggttaaagct atagtagaac caggcggaag tataagagat
    11821 gatgaagtgg taaaagcagc cgatgagtat ggtatggcgc tttattttac aggagtaaga
    11881 catttcttac attaagttta atggaatgtt atgtttttta cacataattc aataaaaatt
    11941 aaataaatta tgtgtaaaat atttccgaaa aattttattt ttaggaaact atgatgttta
    12001 aaactatagg atttaaggtt tctgctgcaa tttttgtggt gttgcttata agttttattg
    12061 taatgcaagt gattttaaat ttggatttta aaaatactgc caataaaatg agcagggcaa
    12121 atttagatac cgtaagtact tctgtttttc aaacaatgag aatggctatg aatttaggag
    12181 atcctgaaaa aattaaagaa gccattgaag atgcaaaaag tatagagggt attagtgata
    12241 ttaaaattta tccttcaaaa gatactatag atctttttga gatgaaagcc cctcaaattt
    12301 caaatgataa gcgtattata gaacaatttt caaatcctaa aattcaagct ttagaagaaa
    12361 atgtaaatgg tgttgtgcat ttaagattga tacgcccttt gattgcagat gaaagttgtg
    12421 ttgcttgtca tgcaaatgct aatgtaggga gtgtgatagg ggttatggat atatcgcatt
    12481 ctttagaagg tgttcaaaaa gatataagta aaaccagtca atcttatatt ataatattta
    12541 ctattgcttt gatttttacc ctttgtgtgg ttcttttaat gcttaaagtt gttgttggaa
    12601 agcctgtttt agagctttta aatcatgcta aagaattagc tcaaggaagt ggcaatttaa
    12661 aagctcgtat ttcagttaaa ggtcaagatg aaattgcttt agcttgtgga tatatcaatc
    12721 aatttatcga aaaaactcac aaggcagtta gcggtgcaag tcataattca aaaaatgtag
    12781 aaaaacaaag caatctttta aattcaaatg ctatttcttt aagtgatatc agttcacaaa
    12841 gtcataagca aatagatcaa agttttaaac ttggtgcaaa tgttggcaat gaacttggag
    12901 aacttgccag tttgtcaaat aaggcaaata gtgccaatga aaaatccttt ttattattag
    12961 aacaaatgct taaatctttg tttaatgttg ctaataaagt atcaacagta tcccaaaatg
    13021 aaaatgaatt ggctaaaaaa gttgaaaaca tggtcaatca agcaggcaat atacaaaaag
    13081 caactcaaat gatggatgag atcgcagata aaaccaattt actatcccta aatgctggca
    13141 tagaagcagc tagggctggt gcctttggac gaggtttttc tgtaattgct gaggatgtta
    13201 ggcagttggc tcagaacagt gaagaatttt tgggaaatgt agctcaaatt acaaaagagc
    13261 ttttgcaaag tattaatgag gttagcgcag aattaaagaa aaatgctcaa agtgtacaag
    13321 ctttaaatga tgacaccgct ttattggttg atgatgctaa tgaggttaaa ttatgtaacg
    13381 aagatgctag ggctttggta actcaatgta ctgaaaaaat aaaaatttcc caagagaata
    13441 tacaaaattt actttctcgt atgcaagaaa atgttgaagt aagtgaaaag aatgaagaaa
    13501 tttctaaaat tctacttcaa gttgcagatg agttaaaaat agtgtgtcat aatctcgaaa
    13561 gcgaacttaa ccaatttcaa atttaaagga ataaaatgaa aaaaacgctt caaattgctt
    13621 tagctgcaac tttttttgca ggttgtgcta gtacttctgt tacttcatct acttctaaag
    13681 gtaataatga acttgcgcaa aatcagcttt tcaaaataga aaaaattata gttaatggta
    13741 aaacttttga tccaaaaaac gcagaggaaa gtccaaatat tagttttgaa aataataaat
    13801 tttatggtta ttcaggatgc aatcgttttt ttggttctta ccaaactaag gcggatactt
    13861 tacaaatcga aggtgatcgc gtggcttcaa ctcaaatgct ttgtcaccca atggatgtaa
    13921 tggattttga aaattctttc ctttcaaatt tcaaaggaac ttttaaaatt tcaaatgaaa
    13981 atggaaaact tgttttaagc aatgatgaaa tgaaaatctt ttttaaataa taccctaaag
    14041 cctcgaaata tcgaggtaat cttcttaaat ttgacaaaag tctaaaaaat gatacaatta
    14101 taattttatt atcaaaaaag gtagttaaat gataaaatca attcctgaat ggagtgagca
    14161 agaatacctc atgctttctt tgcctcatga aaaaagcgat tggaatccct acttagagga
    14221 aattttacaa agttataaag aatttgtaaa agcagtgagt gaatttcaaa aagttttact
    14281 tatagctcct aaacagagtg attttgaaaa ttttaaagat ataaaaaatg tagagtattt
    14341 taaatgtgat accaatgata cttggatacg cgattttgga gctatagata tagtagaaaa
    14401 tggtcattta aaggctcttg attttacttt taatgcttgg ggaaataaat ttcaaagtga
    14461 gcttgataat gctgtaaatt ctaagctttt taaagaaaaa tttaaagagg agcttaaaaa
    14521 ggttgatttt attttagaag gaggaagtat tgactttaat ggagagggtg tgatgcttac
    14581 aagctctcat tgtcttttaa atgaaaatag aaattctcat ctaaacaaaa cccaaattga
    14641 tataaaatta aaagaaattt ttggtttaaa acaaattatt tggttagaaa atggtttcat
    14701 aaaaggtgat gatacggatc atcatatcga taccttagca agatttatag ataaaaatac
    14761 catagcacat tgtatttgtg aagatgaaga ggatgagcat tatttgcctt tgcaaaaaat
    14821 gaaagaagag cttaaaaaaa caggctttga tttagtagaa cttcctatac ctcagccttt
    14881 atactataaa ggaagaagat tgggcgcaac ttatgcgaat tttgtttttg taaataatgc
    14941 tttaattgtg cctttttata aggataaaaa tgatgaaatc atagctaaaa gactttctaa
    15001 agctttacct agtcataaaa ttataggagt agatgcaaga gtgtttttac gacaaaacgg
    15061 ttctttgcat tgttcttgtc aaaatcgttt caaaggttta agatgagttt gcaaaaaaaa
    15121 gcaactcttg tagcaagttt atgtgctatt gttttagcct tggttaaatt tatagtaggc
    15181 ttaacaagtg gttctgttgc ggtgctttca agtgcgattg attctttaat ggattttgct
    15241 atttctgctt ttaatttttt agctcttaaa aaaagctcac aaaaggcgaa tgaaaattat
    15301 aattttggtt tttctaaaat tgaagcttta atgggtttgt tagaaggtgt ttttatagtt
    15361 ggcgtgggga tttttatttt ttatgagagt attttaaaga tttattataa agaagaaatt
    15421 aaagatttaa attcaagcat ctatgtgatg atttttgctt taattatgac tttttttctt
    15481 gtactttttt taaattatgt agctaaaaaa accaaaagtt tgattataga aagtgatgct
    15541 ttgcattaca aaacagattg tctaaccaat gcttgtactt taggggcttt ggttttgatt
    15601 tattttacaa atttacatat tattgatgct atttttggga tagtgatcag tctttatacg
    15661 gcattttctg cttttaaaat cattaaaaaa gctttagctt ttttaatgga tgaggcttta
    15721 cctaaggaac aagtggataa aatttgtact ttgatttcta ataatcctga aataatttcc
    15781 tatcatgaat taaagacgcg taaaactcca agttgtaatt atttaagcgt acatttggtt
    15841 ttttgcccta taatttcgct tttaaatgcg cataaaattt cagatgaaat agaagaaggt
    15901 gtgcgtaaga tgtttgaaaa tgaaaaatgg gatatacaaa ttcatttaga tccttatgat
    15961 gatgcagaac aagaaaggca aagacaatga aaattgcttt aatacaacaa aaatttcatt
    16021 caaataaaga acaaactata aaaaaaactt gcgaatttat agaagaagcc tctaaacaag
    16081 gagctgagct tgtttgtttg ggagaacttc atcaaagtga gtatttttgt caaagtgaaa
    16141 atgtggattt ttttgattat gctaatgatt atgaaaaaga tgtgaaattt tgggcaaata
    16201 tagctagaaa aaatcaaata gtgcttatta cttcattatt tgaaaaacga agcgccggac
    16261 tttatcataa tactgcagtg gtttttgaaa aagatggttc tatagcaggc aaatatcgca
    16321 aaatgcacat acccgatgat ccttgttttt atgaaaaatt ttattttact cctggagatt
    16381 tgggttttga acctataaat acaagtttag gcaagcttgg agtgcttatt tgttgggatc
    16441 agtggtatcc tgaagcagca agaattatgg ctttaaaagg agctgagatt cttatttatc
    16501 ccacggcaat tggttggttt gataaggata aagatgaaga aaaacaaaga cagctcaatg
    16561 cttggcttgg cgtacaaaaa ggacatgcta tagctaatgg tttatatgta gtagctatca
    16621 atagagtagg ttttgaaaaa gatgtaagcg gggtagaaga gggcattaga ttttggggaa
    16681 attcttttgt ttttggccct caaggtgaag aactttgtct tttagattct caaaacgaat
    16741 gtataaaaat catagaaata gataaaaaaa gaagtgaaaa tgtgcgtcgt tggtggcctt
    16801 ttttgcgaga tagacgcata gaatattttg cagatttaac taaaagattt attgattaaa
    16861 tcaataaatc ttatttgttt tgtatatttt caagatagct ttttatttgc tctttttctt
    16921 gttcgtttaa atttataaaa cttatttctt taagtcttga taaaagcaaa ttatcttcta
    16981 aaatttcatt ttttcctatt tctaaagaag tgatgacgct agaacttatg agaagtcttt
    17041 gggttgtatc ttttcttaag ccccatatat tatgtatagc aatattatta tctgcaattt
    17101 gtcctacata aagcataata tgtccaggta aataaagtaa actaagataa gctttcccaa
    17161 agcggtttaa aaaatctttt ttttgagaat tgctaagagt gcttatatca aaatgattaa
    17221 aagaattttt ttgtgcagct gaatttcttg gtagataaag tccaaaagct gaaaagatat
    17281 cacgagttag taaagaacaa tctctttcaa aattataacc gccccagcca taaggcaaat
    17341 ttaaaacttg tgaaagttga ttttttaaat ttttatcatt gaattgtaaa ggaaatttag
    17401 atacatcttt tttagaaatt ttatattttt tagagcctat ttttccataa aaatagtttt
    17461 tatcttcttt gtagtaagga taaatagcgc caattctact ttcaaagaaa aatttaccat
    17521 cctcgctata gataggaaat ttttctttta gcggtgtgat aaagttgaga ttttcataga
    17581 ttttcgctct atcgtttgag aaaaattcca aatttttact ttcaacaaat ccaaatccag
    17641 cttcacctaa aacaaaagca taacgcttat ctttactaaa atgtgaaatt aagacagggg
    17701 ttccagcatt taaaatgcca tcgcttgcat agtcaaaagg aattccttca ttttcaaaaa
    17761 aaggattttt taagatagct ctttgggttg gaagattttt aatgattgta ttttggataa
    17821 ttaaagcttt ttgattaagt ttgccaaatt cttggatatt tgcgttattt gtagcgtttt
    17881 taaaccatga aagtggaata atttgtttat tgaaaaaata ataagtattt tttgaattta
    17941 aatataaggg aaaggaccaa aaaatatttt gtcctttgta atttttaaac gaatcatgcc
    18001 aagggttaaa gaaatatttt ttatatcgtt ttgcatcaaa attaatatcg taagcaaatt
    18061 gtggcaaaat gcttacattt tgttcgtatt caagttttgc ataatgttga ttttcatttt
    18121 tttgttctaa attttcatga tgaagtgaag ttaaattttt tgttgaacaa gctgttaaaa
    18181 atagcactat aaaagtaaaa tataaacaag atttcataat caacctttta gaaaaaatag
    18241 ttataattaa agccaaggaa atataatgct tgataaacta gaaaaaattt tagcttatga
    18301 taatgttttt ttaagtggtg gtgctggagt tggtaaaagc tttttgacaa atgagcttat
    18361 caaatcttat agaaaacaaa aaaaattagc catagctctt ggttctagtg ctctatcggc
    18421 gtttaatata ggcggtgtta ccttacacag ctttttttgt ttaggatatt gtgatgatat
    18481 gatgaaatta agcgcattgg atcgcaatca aaaacaaaaa gaaaaattaa caaaacttaa
    18541 agagctttta aaaacgattg agcttattat tatcgatgaa atttccatgg ttagcgcaag
    18601 tgtttttgaa atgataggct ttagacttaa aaattctcaa tttaatggaa aaattttagt
    18661 tgtaggagat ttttttcaac tgcctcccgt aattaaagaa aaaaaagaaa ctttatttaa
    18721 tcattcttat tatgcttttt cttcattttt ttggcaagat ttaaatttta agaatattaa
    18781 actttctcaa cctaaaagaa cacaaaatat ggaattttat aactatttat ctttgattag
    18841 acaaggtttt ttagatgaaa aaattttaag cttttttgaa tctttgcgaa ttgattataa
    18901 agaattagaa aatttagaag atgattatac tttactttgt ggtatcaata aaaaagtaaa
    18961 caatatcaat caagaaaaat taagcaaact tgagacccca cttgtatgct ttaaggctca
    19021 ggttaaaaaa gaagataaga gaataaaaga tgaagaactt gattcttggg ttggaagctt
    19081 aaatatattg gaagaattaa atattaaaat aggtgctcgt attatttttt gtgtaaataa
    19141 ttgggataag aattattata atggtgagca aggcattata gaagatattc tttatgaaga
    19201 ggagaaaatt tatattagta ttattaaaaa taatgggatg aaaattttac ttgaacctta
    19261 tacttttttc atggaagaac ttgaacaatc aggtaaagat tttgttgtta atattcttgc
    19321 aagtgttaca cagtttccta ttaaattagc ttatgctatc actatacaca aatcacaagg
    19381 tatgagtatt gaaaaattag tgtgtgatat tgatcatatt tttgaaaatg gacagcttta
    19441 tgtcgctctt tctcgcgcta caaacccaaa tactttaaaa atttattcta caaaaaagat
    19501 aaattttgga ttttattttg ctaatatttt aaaaatagat tctaatgtga tcgaatttta
    19561 taaaaaacat aattttttag atcttgaaat acaagaacaa atcatttaaa ggcattaaat
    19621 gaaaaaaata tttttaagtg tttttttggc tttgagttta aatgctcaaa atcttgaaat
    19681 agataaaata agaacagatt tgtattctaa aagtggggca aatgttctta aaaaagttga
    19741 aatttctttg aaatttgatg ggaataattt aaaagaaaat gaaaataagt tgattgatgc
    19801 tgtaaataca gtaatttcag ggttttttta cgaagatatt tttacagaaa ttggaaaaaa
    19861 taattttaaa aaaactttag aaaaattttt agataagaag tataagatta aattagatga
    19921 tatatatatc atatctttaa gcggagtgga aaaatttgat ttagaggagt ttaaacgctt
    19981 tttagaaagc actgaggcta aagagaaagg tatgggcagc gaggtaaaaa aagcacttga
    20041 aaacttagaa gttcctaaaa ctcaagttcc tggtgttgaa aagatcccaa ctcctagtgt
    20101 tccaaattta gaagccaagc aagttgaaca gcttttcaaa gattcagatg aagaaaataa
    20161 aaatgacaat ggagaaatca atatagataa tttaaataca cctaaaatga ctccagatat
    20221 agaagaaaaa attaaaagag atttaatcgc caatcctcca caaatattca aagaaaataa
    20281 tgcaagcaag ccttatcatt tgccacaaac aggctatgat ataaagcttg atgaaaattc
    20341 aacgcaaaat tagcgaacta tatcataatt ttgcggaatt tttgccttaa aaacatcgga
    20401 attaattttt ggatttttaa tttgattgtt tagattgatt ataacatcat tttcaaattc
    20461 atctttatag gatatgcttt gaatttgctc ttgattaagc ttaattgtat agtttatatt
    20521 atcatatttt gctacaagtt tatctttgtc tataagactt gcttttttga aaatttcatt
    20581 aagatttgga atgttatcaa gatgagagaa aatgacttgt tctagatcgt gctctactat
    20641 ggttacttga tttttgttaa tataaatctc ttttttacta ggagtatcat aactccaata
    20701 tgcttgatcc ttactcagta taaaatgtcc agaataagaa agtgtagagt ttttggattt
    20761 tactatttgg ataaaatcgc ttgaaaaggt attaaaatta agatcaaggg caaaaagttg
    20821 tcctataaaa ataaaaaata tcaagaatgt ttttttcatt tattttcctt aaaaaaatta
    20881 tattttttat atcattctag ctaattttaa ttaaataatc gttataataa tagtttgaaa
    20941 aatttataaa ggtttaaaaa tgtttttaaa taccttaaaa gccgtttttg gaacaaaaaa
    21001 tgatcgtgaa gttaaaaaat actttaagcg tgtagcacaa atcaatgctt tagaaggcaa
    21061 atatcaaaat ttaagcgatg atgaattaaa agccgaattt gcaaaattta aagagcaaat
    21121 tttaagcgga gaaaaaaacg aaaatgatat cttaaatgat gtttttgcta tagtcagaga
    21181 gacaggtaag agaactttaa atatgcgtca ttttgatgtg cagttaatcg gtggtatggt
    21241 tttgcacgat ggaaaaattg cagaaatgaa aacaggggag ggtaaaaccc ttgtagcgac
    21301 cttgcctgtt gttttaaatg ccatgagtgg aaaaggcgta catgtcgtta cagtaaatga
    21361 ttatctagcc aaaagagacg ctgagcaaat gagtgcgatt tataactttt taggttttag
    21421 tgtaggcgtg attctttctt ctcaaaacag tgacatagag cacaagcaag cttatgattg
    21481 cgatattact tatggaacca ataatgagtt tggttttgat tatttgcgtg ataatatgaa
    21541 attttcaaaa gttgaaaaag ttcaaagaga gcataatttt gttattgtag atgaagtaga
    21601 tagtatttta attgatgagg caagaactcc gcttatcatc agcggtccta caaatcgcac
    21661 tttagatggt tatattaaag ccaatgaagt agccaagcaa atgcaaaaag gcgaagcagt
    21721 tttaccccct gcaaaacctg agggtgattt tgtagtagat gagaaaaatc gtaatatttt
    21781 aatcacggaa gcaggtattg ctaaggctga aaaacttttt ggtgtagaaa atttatacag
    21841 tcttgataat gctatcttag cacatcagct tgatcaagct ttaaaggcgc ataatctttt
    21901 tgaaaaagat gtgcattatg ttttaagaaa taatgaagtt atcatcgttg atgaatttac
    21961 agggcgttta agtgaagggc gtcgttttag cgaaggattg catcaagctt tagaagccaa
    22021 agaaaatgta aaaattcaag aagaaagcca aactttagca gatattactt ttcaaaatta
    22081 ttttagaatg tataacaaac tcgcaggtat gacaggaact gcacaaacag aagcgactga
    22141 attttctcaa atttatagtt tagatgttat ttctataccg acaaatattc ctattaaaag
    22201 acaagataaa gatgatctta tctataaaac tcaaaatgaa aaatttaaag ctgtaattga
    22261 agagatcaaa aaagccaact ctaaaggtca gcctgttctt gtgggaactg caagtataga
    22321 acgcagtgaa gtttttcaca atatgcttgt aaaagaaaaa atccctcatc atgttttaaa
    22381 tgctaaaaac cacgagcaag aagctttgat tatccaagat gcaggtaaaa aaggtgctgt
    22441 aactatcgct acaaatatgg caggtcgtgg tgtggatata aaaatcgatg atgagattag
    22501 ggctttgggt gggctttata tcatcggtac agaaagacat gaaagccgcc gtattgataa
    22561 tcaacttcgt ggtcgtgcag gaaggcaggg cgatcctgga ataagtcgtt tttatctaag
    22621 tttagaagat aatcttttaa gaatttttgg cggggatcgt attaaaaata ttatggatcg
    22681 cttgggcata gaagagggcg aaagcataga gtcaagaatt gttacaagag cggttgaaaa
    22741 tgcgcaaaaa aaagtagaaa gcttacattt tgaaagcaga aagcatttgt tagaatacga
    22801 tgatgtagca aatgaacaaa gaaaaactat ttatcgttat cgcaatgagc ttttagatga
    22861 aaactatgat attagagcta aaatttctca aaatatcgct gaatatagtg caaatgtaat
    22921 gaatgattat atgcttgatg aaagcggttc taatgtaaat tttgaaaatt tgaaagcaaa
    22981 aattttatat gaatgttcaa ctcagattag tgaaaaagat tttgagaatt taagcgtcat
    23041 tgaaatgcaa gataagctaa gtcaaattct tgaaaattct tataacgaaa agatgtcaag
    23101 acttgggatt aaagaattgc gtaatataga gcgtatttta tatttgcaag ttttggataa
    23161 tgcttggaga gagcatttgt atcaaatgga tattttaaaa acaggaatag ggcttcgtgg
    23221 atacaatcaa aaagatcctc ttgtggaata taagaaagaa agttataatc ttttcttgga
    23281 gttggttaat cgtattaaat ttgatagtat taagctactt tttagcgtac aatttaatca
    23341 agaagaggtg caaaatttag aaaataaagc caatgaagaa aatgaaaagc tacttcaaag
    23401 ctcagtagaa atgggcgcaa gcgaagataa tcttggcgaa gctgagttta aaaaagttcc
    23461 acgcaatgct ccttgtcctt gcggaagtgg aaaaaaattt aaagaatgcc atggaaaaag
    23521 tggtcctaag caaggaattt tagcttgaat aaaagcgttt taaaatattt actttttaaa
    23581 tatttaagat ttgataaaga acaacccttt atcaatcttt ctatgctttt ggccttttta
    23641 ggagtttgtg taggactttg cgttttgctt gtagctatgg caattatgaa tggttttgat
    23701 aaagaatttg aaaaacgctt ttttgtgatg aattatccta ttactatttt gcctaaattt
    23761 tacgctcctg taaatgatga atttatagat gagttaagaa aaacatttcc aaatttgtta
    23821 tttagccctt atataagcac tcaagttgtt gtaaagggag ataatcgttt tgaaggtggt
    23881 gtgctttttg gcgttaattt taatgatgaa aaaaaaataa acgaagtggt tgctaaagct
    23941 ttaagggatg agaatttaag tggttttgat atacttgtag gatcagcact tattgatgaa
    24001 tttggtttgc ataaaaatga caaactttca cttatttttt caaatcttaa tcctagtgga
    24061 ttttctttag taccacaaac taaacgtttt gatgttaaag cgcgttttac ttcagggctt
    24121 gcattttatg ataaagctta tatgtataca gatgttgatg cattgaagaa agtacttgga
    24181 atgcctaaaa atccaaatta tgatggaatt catgtatata gcgataatgc ttttaaggat
    24241 gttgaaaaaa ttaaatctta tttaaaagat gattatgctg tagtaggttg gtgggaacaa
    24301 aataaaaatt tcttttcagc tttagagctt gagaaaagag cgctttttat agtgttgatg
    24361 cttattattt tggttgcaag tttaaatata gtaagttctt tattgatgat agtgatgaat
    24421 cgtcgcagtg aaatagcact tttacttgcc ctaggtgcaa gcaaaaatga ggtaaaaaag
    24481 agtttttttg ccttaggtat gcttattggt ggtggcggta tgatagtggg tgtggtgctt
    24541 gcattttttg ctttatggct tttaggaaat tttgatattg taactttacc tgctgatgtt
    24601 tatggaacca gtaaattacc acttgatttg tctttaatgg atttttcttt aaccattgtg
    24661 ggtgctttaa taatcatagc tttatcatct ttttatcctg caaaaaaagc aactcaaatt
    24721 aatattttag atactttaag aaatgaataa attgtaattt tggagatttt tattgtcttt
    24781 gtttactcaa aaaaataaga attttaaacc tttaaaacct ctatcaaagt caaaaataat
    24841 cactaattta attcttttga ttttattttt aatattgttt tgttattgta gttttagtat
    24901 aagtgcttat cattttgatt ttagcgtaat tgcgacctat aaagaaaaat ttcttcaagg
    24961 ttttttaaat actttaataa tcagtttttt ttctttatta ctgagtataa ttttgggtgg
    25021 agttttttgt gctttttctt taagttcaat tgttttttta agatttttat ctacatttta
    25081 catagagctt atcagaggaa cccctttact agtgcaggta ttattgatgt attatatcat
    25141 tgcaaataat ttaggacttg ataatcgata tgtggctgga gttattattt tatcatgttt
    25201 ttctgctgct tacttagctg aaatatttag agctggaatt ttaagtattt ctatatctca
    25261 gcttgagagc gctagggctt tagggttaaa agagatgcag gtttttgcgt atgtaatttt
    25321 tccccaagct ttaaaaaata ttttagcacc gctgagtgga caatttgcaa atttaattaa
    25381 agatagttcc ttattaagtg ttattgctgt aaatgaatta acccaaagtg cgcaagagat
    25441 aaattcttat acttttgcta ctcttgaagc ttatgtaatt ttggctatta catatcttat
    25501 tttgacttta cctataagta tattttctcg ttatttggag agaaaatgcc aaaaatgatt
    25561 taaaaaagct tgacaaatag agctaatttt ggcataatca catttttatt tcagaaaatg
    25621 tctcgttagc tcagccggta gagcatctcc cttttaagga gggggccgtt ggttcgaatc
    25681 caacacggga caccattata
//
LOCUS       DAPWGO010000012        25658 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.012, whole genome shotgun sequence.
ACCESSION   DAPWGO010000012 DAPWGO010000000
VERSION     DAPWGO010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25658
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.012"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            33..2030
                     /locus_tag="RJ336_000462"
     CDS             33..2030
                     /locus_tag="RJ336_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HDZ5212932.1"
                     /translation="MMYKKQNLPELTLRGLILGSILTIIFTASNVYLGLKVGLTFSSS
                     IPAVVISMAVLSLFKTSNILENNMVQTQASAAGTLSSVIFVIPGLFMCGYWSEFPLWQ
                     TFMICLCGGGLGVLFTIPLRRAMVVESKLAYPEGRAAAEILKVANKDQSNKKGKQGIK
                     EIALGSFIAAIFSLLSNGFKLAASESNFAFIWNKMAFGFSMGYSLALLGAGYLVGLAG
                     AIALFVGMFLAWGIFTPYLSNFEFDSAKNAVDLASSVWSSKVRLIGTGAIAIAALWTL
                     IELLKPVIEGIKEIVKNVKITNQEKNERTNIDLSLKSIFILFVLMVVGLFITFYSFVE
                     DANLSIYYQMLFSFVGTLVSVLIGFFVAAACGYMAGLVGSSSSPISGIGLIGVIISSI
                     VFLVLGVELFQDPMLSKFAVALAIFTTSVILATAAISNDNLQDLKTGHLVGATPWKQQ
                     VALLVGCVFGALAIVPVLNLLYQAYGFVGAMPREGMDTSSALAAPQANLMSTIAQGIF
                     HHNIEWGYMAFGVFVGILMIIIDKILRRTQKMSLPPLAVGIGIYLPPAVNIPLVIGGI
                     LKFIVMQYLTKKYAKNSHKEEKLASCEQRGTLFASGLIVGESIFGVIIAGITVFSVSM
                     GGSENPLALNLANFHDSELFALIFFVGVVLYFIKRIVKKDA"
     gene            2104..2907
                     /locus_tag="RJ336_000463"
     CDS             2104..2907
                     /locus_tag="RJ336_000463"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HDZ5212933.1"
                     /translation="MENLNALILGIIEGLTEFLPVSSTGHMILGTTILGIDIDEFWKS
                     FLIIIQLGSILAVIFVFWRKLFQGLDIWLKLAAGFFPTGVIGLFVAKYLNALFNGWVV
                     VGMLIFGGVVFILIELAHKNKQYRINSLEEISFKQAFCIGIFQSLAMIPGTSRSGASI
                     IGGLLLGFNRKVAAEFSFLLAIPTMIIATAYSIYKEPELLSNANSLIPLGIGFITAFV
                     VAVLVIKFFLKFISKFDFIPFGIYRIILGFVFFYLYYSGILNAGSEFKL"
     gene            3039..4847
                     /locus_tag="RJ336_000464"
     CDS             3039..4847
                     /locus_tag="RJ336_000464"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDZ5212934.1"
                     /translation="MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSC
                     AHLMAQAIKNLYPEAKFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIE
                     ISKYEITKNEALAKFQNDDLKQEVLLRIPDGAVSIYKQGEFEDLCRGPHVPNTKFLRF
                     FKLTRVAGAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKL
                     FTFDDEIGGGLPIWLSNGARLRSKLEHILYKIHRLRGYEPVRGPELLKADAWKISGHY
                     ANYKENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSG
                     VLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKA
                     IGDDEIWEVATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQV
                     DFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVG
                     IVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDDEV
                     AKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEVHF"
     gene            4844..5362
                     /locus_tag="RJ336_000465"
     CDS             4844..5362
                     /locus_tag="RJ336_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDZ5212935.1"
                     /translation="MSKEKEVLLNEEIRADEIRCVGDDGKVYGIISSDEALEIANRLG
                     LDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKIAQNDIN
                     YKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEPNFEG
                     RYVNMLVTPKKA"
     gene            5401..6492
                     /locus_tag="RJ336_000466"
     CDS             5401..6492
                     /locus_tag="RJ336_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDZ5212936.1"
                     /translation="MKENPSFLKEQIITYLGNKRALLSFLNKGFKVAKKELGKDKFSF
                     CDIFSGSGVVSRFAKAHSNYILANDLEDYSKLINECYLANKDKDLLQNIKKHYKNLIQ
                     NLDFQKGFISELYAPKDDDDIKKNERVFYTFKNALYLDTIRQKIENEIPKELRHFFIA
                     PLIYEASVHSNTSGVFKGFYKGKDGIGKFGGEGQNALKRIKGEIELKMPIFSNFSCEF
                     EVMQKDASMLAKELDFFDVVYLDPPYNQHPYSSNYFMLNLIANYKKPEEISKISGIPK
                     DWNRSTFNKPKFAQDALFELINDLKARVILLSYNCEGFVKKEIFLKRLSTLGKCRILE
                     QKYNTFRASRNLKNRNIHLHEQLYILVKN"
     gene            6532..10157
                     /gene="vvfC"
                     /locus_tag="RJ336_000467"
                     /pseudo
     CDS             6532..10157
                     /gene="vvfC"
                     /locus_tag="RJ336_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_172669436.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter serine protease VvfC"
     gene            10238..11266
                     /locus_tag="RJ336_000468"
     CDS             10238..11266
                     /locus_tag="RJ336_000468"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDZ5212937.1"
                     /translation="MKIKVGILGASGYAGNELVRILLNHPKVEISYLGSSSSVGQNYQ
                     DLYPNTPLNLCFENKNLDELELDLLFLATPHEFSAKLLNENLLKKMKIIDLSADFRLK
                     NPKDYELWYKFTHPNQELLQNAVYGLCELYKEEIKKASLVANPGCYTTCSILSLYPLF
                     KEKIIDFSSVIIDAKSGVSGAGRSAKVENLFCEVNENIKAYNLALHRHTPEIEEHLSY
                     AAKKKITLQFTPHLVSMQRGILISAYANLKEDLQEQDIRDIYTKYYQNNKFIRLLPPQ
                     SLPQTRWVKSSNFADINFSVDQRTKRVIVLGAIDNLIKGAAGQAVQNMNLMFDFDEDE
                     GLKFFANL"
     gene            11276..11722
                     /locus_tag="RJ336_000469"
     CDS             11276..11722
                     /locus_tag="RJ336_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDZ5212938.1"
                     /translation="MLIRAMQKSDYEAVYKLWCEIKGFGIRSIDDSKENIENFLDRNP
                     NLSVVAVIDEEIVGSILCGHDGRTGGFYHVCVHKDHRKKGIAHEMTKFCLEALKAQKI
                     NKIALIAFKNNDLGNEFWKHYGFTLREDANYYDLSLNEYNQTSFNA"
     gene            11726..12571
                     /gene="argB"
                     /locus_tag="RJ336_000470"
     CDS             11726..12571
                     /gene="argB"
                     /locus_tag="RJ336_000470"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDZ5212939.1"
                     /translation="MIMQKYLEKANVLIEALPYIRKFNSKIILIKYGGSAMENEELKH
                     CVMQDIALLKLVGLKPIIVHGGGKDISAMCEKLGVKSEFKNGLRVSDKATTEVASMVL
                     NHINKNLVHSLQNLGVKVIGLCGKDGALLECVKKDENLAFVGTIQKVNSKILEELLEK
                     DFLPIIAPIGMDEDFNTYNINADDVACAIAKALRAEKLAFLTDTAGLYEDFSDKNSLI
                     SKISLEQAKILAPKIEGGMHVKLKSCIDACENGVKKVHILDGRVKHSLLLEFFTDEGI
                     GTLVG"
     gene            12575..13762
                     /locus_tag="RJ336_000471"
     CDS             12575..13762
                     /locus_tag="RJ336_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDZ5212940.1"
                     /translation="MKMDYKEQSHIVPTYKRFDIVLEKGQGVYLFDDKAKKYLDFSSG
                     IGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSG
                     TESIEGAMKTARKYAFNKGIKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISG
                     VKFAKYNDISSVEKLVNEKACAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIA
                     DEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVINQKVASNSLEVGDHG
                     STYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGF
                     MQGLSLDKSVKVAKVIQKCQENALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKAL
                     KSF"
     gene            complement(13782..14411)
                     /locus_tag="RJ336_000472"
     CDS             complement(13782..14411)
                     /locus_tag="RJ336_000472"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HDZ5212941.1"
                     /translation="MNTFEQKRCQNMAEEIAQKVFINEELFNAFCQIPREIFSPLKAH
                     AYRLDALPLANSQWISSPLTVAKMTMALDFKNADSILEIGCGSGYQAAILSKVIRRVF
                     TIERIENLAKKAAQTFRELELFNINVKFDDGQNGWKNYAPYDRILFSAYATQIPEILL
                     DQLSDDGILVAPILHNGKQFITRLRKNGTNLQKEILEECLFVPIVDGKE"
     gene            14500..15048
                     /locus_tag="RJ336_000473"
     CDS             14500..15048
                     /locus_tag="RJ336_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HDZ5212942.1"
                     /translation="MLIKFKNHSPKLGQNVFVAEGAKIIGEIEIGDESSIWFNCVLRA
                     DVNFIKIGKRTNIQDLSTVHVWHREFDKKGKLKDAGFPTIIGDDVTIGHNCVIHACVI
                     KNRVLIGMNAVIMDSALIEEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRELNNEEI
                     NFLKQSALNYVDFKNEFLKDLQ"
     gene            complement(15017..16390)
                     /locus_tag="RJ336_000474"
     CDS             complement(15017..16390)
                     /locus_tag="RJ336_000474"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDZ5212943.1"
                     /translation="MMTSKTSLALLCDFYEFTMSQGYFKNNKKNQICYFDIFFRKIPD
                     SGSFAIFAGLEDILDFVENLSFDAEDIEFLRKQGIFDTEFLDFLTNFKFKGEIYAMRE
                     GEVIFPNEPLLCVKATTIEAQLLETFLLLSLNHQSLIATKTNRIVRAAKDSKILEFGS
                     RRAQGSEAALKGARAAFIGGCIGSACTLAGKIYNIPINGTMAHSWVQMFENELEAFKA
                     YVKIYPKNPVFLIDTYDCLNSGLKNAIKVFKEFGIQEGGVRIDSGNLLKLSLKIRQEL
                     DQAGLQKCKIIVSNALDEWSIKKLKEQNAPIDIFGVGERLITASSDPIFSCVYKLAAL
                     EDQGIKPKIKISENNEKSTLPHFKKLFRVYDKNTQKILFDELYVFDENPNQDENLERK
                     ELLELVYKEKRLLKKSSLNTIQDYTKEQISKLDESFLDLDRFVKFEVKLSPKLQNITE
                     DLLKTRF"
     gene            complement(16377..17399)
                     /locus_tag="RJ336_000475"
     CDS             complement(16377..17399)
                     /locus_tag="RJ336_000475"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDZ5212944.1"
                     /translation="MQRKRIYNPNSNETLGDRKIFDGNPHGILNFTKAKYTWALKLWD
                     LMEANTWFPKEVDTTKDALDYRCNLTVGEKRMYDLVWSQLISMDSFQTNNLADNINPY
                     ITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSI
                     YEELAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDE
                     ITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFTD
                     DIIEEYIHYLVDQRLSAINLDKLYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS
                     ISFDDF"
     gene            complement(17402..17824)
                     /locus_tag="RJ336_000476"
     CDS             complement(17402..17824)
                     /locus_tag="RJ336_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDZ5212945.1"
                     /translation="MKTKAKISSRWLRFRALLIDIFLIYIPILYLFYFLLGSKEAFLN
                     NHFITTLCTFLFGLIQAIFLTKKAQSPGLKAYDLYLIDIKTGKKLSFLRILLRYVIFI
                     ISFGLLFGLFVSFVRKDRLNLHDILTQSCIATKSIKKG"
     gene            complement(17825..18433)
                     /gene="pyrE"
                     /locus_tag="RJ336_000477"
     CDS             complement(17825..18433)
                     /gene="pyrE"
                     /locus_tag="RJ336_000477"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDZ5212946.1"
                     /translation="MNLEQIYKDCGAYLEGHFLLSSGKHSQFYLQSAKVLEDPKLAAK
                     LCDELAKIITSYKIEFDSICSPALGGILAGYELARACSKRFIFTERVNKEMTLRRGFE
                     VKKSEKFIICEDIITTGGSALESAKIIESLGGIVVGFAALANRGFCAVENLKSPRKDN
                     AKLPENLPLFTLGNFEFEIYDETNCPLCKKGSKAIKPGSRGN"
     gene            complement(18436..18999)
                     /gene="frr"
                     /locus_tag="RJ336_000478"
     CDS             complement(18436..18999)
                     /gene="frr"
                     /locus_tag="RJ336_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDZ5212947.1"
                     /translation="MIMLNEIFNKQKTQSEKSLEALKKDFTTLRTGKVNTHILDHITV
                     DYYGTQTPLNQVATVLASDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKL
                     FFPPMTREQREENVKQAKAMGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYD
                     EVQKLTDTYTTKIDESVKNKESELLKV"
     gene            complement(19009..19380)
                     /gene="secG"
                     /locus_tag="RJ336_000479"
     CDS             complement(19009..19380)
                     /gene="secG"
                     /locus_tag="RJ336_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDZ5212948.1"
                     /translation="MITLLIILQFIIVVVICIAVLLQKSSSIGLGAYSGSNESLFGAK
                     GPAGFLAKFTFVMGILLIANTIGLGYLYNKASKDSLAEKIKVENNNTTIPSAPIVPAT
                     PNTNSIAPSAPQLPSDVNSSK"
     gene            complement(19484..20179)
                     /locus_tag="RJ336_000480"
     CDS             complement(19484..20179)
                     /locus_tag="RJ336_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDZ5212949.1"
                     /translation="MSLYDRDYSRSKEFENTRSSELSIFIKQTYQLFAASLLAATVGA
                     YVGIFALASFFIQSQVTFWILFAVEIGLLFALQWKKREAPLNLVLLFGFTFCSGLTLT
                     PLLISVLALPAGGIIIAQAFALTTVAFAGLSVFAMNTKKDFTVMGKALFIVLIVIVAA
                     SLLNLFFQSSIVNLAISAVAAILFSFYILYDTQNIIRGNYETPIEGAVALYLDFVNLF
                     VSLLNILRSFNSR"
     gene            20339..20974
                     /locus_tag="RJ336_000481"
     CDS             20339..20974
                     /locus_tag="RJ336_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HDZ5212950.1"
                     /translation="MENLISGAIKFMQEDFKEHEELFESLKNKQNPHTLFIGCSDSRV
                     IPNLITNTGPGELFVIRNIANIVPPYRVGEDYLATTSAIEYALNSLHIKNIVVCGHSN
                     CGGCNALYYSDEELNKIPNVKKWLTMLDPIKKDVMIFARDDLAMRSWLTEKLNLVNSL
                     QNILTYPGVQEALDEGKIEVHAWYYIIETGEIYEYDFKAKIFTLIQDRKVQ"
     gene            20971..22854
                     /locus_tag="RJ336_000482"
     CDS             20971..22854
                     /locus_tag="RJ336_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HDZ5212951.1"
                     /translation="MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDL
                     NNQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKIPDMIVGQKINEEAVARFLKAKE
                     KLLDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDK
                     AMENLQNSSNVNLDSFKSKITNPEELEKITLKERYISNAVDSYSEILKYLRSNADLLE
                     SNYIFSLLELQVWIDRINEAIGVSFVNIGKIVISALVLVFFISLRRFFANIVYFFLVQ
                     LFYRNKNDVDDIKVIFIENIKKPVGFLLIVYAISLCLTIATYPAPLSVNLSNFFHIVY
                     AVLIAWLILRMLDGYGVVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGF
                     NISAIIASLGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVETG
                     LRKTTIRTFDNCLVFLPNSTIMGANIKNWSKRRMGRHVRMYLGVGYDATPEKLEQCVK
                     DLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSEFADSSI
                     NIELYFYTKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAK
                     AIK"
     gene            complement(22878..23849)
                     /locus_tag="RJ336_000483"
     CDS             complement(22878..23849)
                     /locus_tag="RJ336_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein
                     NifU"
                     /protein_id="HDZ5212952.1"
                     /translation="MGKNSLIGGSIWDEYSQKVQDRMNNPQHMGEFSEEDAKARNAKL
                     IVADFGAESCGDAVRLFWLVDEKTDKIIDAKFKSFGCGTAIASSDTMVDLCIGKTVDE
                     AVKITNLDVEFAMRDNPETPAVPPQKMHCSVMAYDVIKQAAAHYKGISPEDFEDQIIV
                     CECARVSLGTIKEVIKLNDLHSVEEITQYTKAGAFCKSCIKPGGHEKRDYYLVDILAE
                     TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQK
                     AEGAAIDVYIRYLGACSGCSSGSGATLYAIETILQEELSPNIRVMPV"
     gene            complement(23859..25040)
                     /locus_tag="RJ336_000484"
     CDS             complement(23859..25040)
                     /locus_tag="RJ336_000484"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifS family cysteine desulfurase"
                     /protein_id="HDZ5212953.1"
                     /translation="MKVYLDNNATTMLDPNAYELMLPFLKDMYGNPNSLHQYGSATHP
                     ALREALDKLYAGLGANDLDDIVVTSCATESINWVLKGVYFDHILDKERNEVIISSVEH
                     PAVAAAAYFLKSLGVKVIELPVNEEGVSTVEDLRKVISDKTALVSVMWANNETGMIFD
                     IKAMAELAHEFGALFHTDATQAVGKIKVNLTQVGVDFASFSAHKFHGPKGVGGLFIKK
                     GLKLTPLLHGGEHMGGRRSGTLNVPYIVAMGEALRIANTMLDFEDSHIRRLRDKLEDQ
                     ILALPDTTVVGKREHRVPNTILASIKGVEGEAMLWDLNKNGIAASTGSACASEALESN
                     PIMEAIGAEHDLAHTALRLSLSRFNTEEEIDYAAKQIKNATQRLRAISCTYAYNPNNY
                     K"
     gene            complement(25218..25617)
                     /locus_tag="RJ336_000485"
                     /pseudo
     CDS             complement(25218..25617)
                     /locus_tag="RJ336_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343684.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
BASE COUNT         8724 a         3482 c         4516 g         8936 t
ORIGIN      
        1 ttaagttgaa agtaaaattt taaaacggag aaatgatgta caaaaaacaa aatttaccag
       61 aacttacctt aaggggtttg attttgggaa gtattttaac tattattttt acagcttcaa
      121 atgtatattt ggggttaaaa gtgggactta ctttttcatc atcaattcca gctgtggtca
      181 tctccatggc ggttttgagt ctttttaaga cttcaaatat tttagaaaat aatatggttc
      241 aaactcaagc ttcagcagca ggaactttat catcagttat ttttgttatc ccagggcttt
      301 ttatgtgtgg gtattggagt gaatttccac tttggcaaac ttttatgata tgtctttgtg
      361 gtggtggact tggagtgctt tttactatac cattaagaag ggctatggtg gttgaaagta
      421 aacttgctta tcctgagggt agagccgcag ctgaaatttt aaaagtagcc aataaagatc
      481 agagtaataa aaaaggaaaa caaggcatta aagaaatagc attaggctct tttatagctg
      541 ctatttttag tttattaagc aatggtttta aactcgctgc aagtgagagt aattttgctt
      601 ttatttggaa taaaatggct tttggttttt ctatgggata ttctttggca cttttaggag
      661 caggttattt agttggttta gcaggtgcta tagctctttt tgtaggtatg tttttagctt
      721 ggggtatttt tactccctat ctttcaaatt ttgaatttga tagtgcaaaa aatgccgtag
      781 atttagcttc tagtgtatgg agttctaaag taaggcttat aggaacagga gctattgcta
      841 tagcagcgct ttggacttta atagaacttt taaaacccgt tattgaaggt attaaagaaa
      901 ttgttaaaaa tgttaaaatt actaatcaag aaaaaaatga aagaacaaat atagaccttt
      961 ctttaaaaag tatttttata ctttttgttt taatggttgt gggtttattt attacttttt
     1021 atagttttgt tgaagatgct aacttaagta tttattatca aatgctattt tcatttgttg
     1081 gaactttagt ttctgtttta ataggttttt ttgttgcagc agcttgcgga tatatggcag
     1141 gacttgtagg atcttcttct agtcctattt ctggaatcgg acttattggt gttattattt
     1201 cttctattgt ttttttggtt ttaggtgtgg aactttttca agatcctatg ctttctaaat
     1261 ttgcagtagc attagctatt tttactacta gtgttatttt ggctacagct gctatttcga
     1321 atgataattt acaagattta aagacaggac atttagtcgg agctactcct tggaagcaac
     1381 aagttgcttt acttgtaggc tgtgtttttg gtgctttggc tatagttcct gttttaaatt
     1441 tgctttatca agcctatggt tttgttggag caatgccaag agaaggtatg gatacttcat
     1501 cggctttagc agcaccgcaa gcgaatttaa tgagtactat cgctcaagga atttttcatc
     1561 acaatataga gtggggttat atggcttttg gtgtatttgt aggaatttta atgattatta
     1621 tagataaaat tttaagaaga acacagaaaa tgtctttgcc gcctttagcc gttggaatag
     1681 gtatttacct tccgcctgct gtaaatatac ctttagttat aggcggaatt ttaaaattta
     1741 ttgtaatgca atacttgact aaaaaatatg caaaaaattc tcataaagaa gaaaaacttg
     1801 caagttgtga gcaaagaggc acgctttttg cttcagggct tatagtgggt gaaagtattt
     1861 ttggggtaat tatcgcagga attactgtat tttcagtaag tatgggtggt agtgaaaatc
     1921 ctttagcttt aaatttagca aattttcatg atagcgagct tttcgcactt atcttttttg
     1981 tgggagttgt attatatttt attaagcgta ttgttaaaaa agatgcttaa tttttggggt
     2041 taaaacccca tttaatccat tctgatataa tttttctttt gcaattatca ttcaaggatt
     2101 aaaatggaaa atttaaatgc tttaatactt ggaattatag aaggtctgac tgagttttta
     2161 cctgtttctt caacaggaca tatgatttta ggtacgacta ttttaggtat tgatatagat
     2221 gagttttgga aaagtttttt gattatcatc cagcttggtt ctattttggc ggtaattttt
     2281 gtattttggc gtaaattgtt tcaagggctc gatatttggt taaaacttgc agcgggattt
     2341 tttcctactg gagttatagg gctttttgtg gcaaaatact taaatgcttt atttaatggt
     2401 tgggttgtgg ttggaatgct catttttggt ggtgttgtgt ttattcttat agaacttgcg
     2461 cacaaaaata aacaatatcg tatcaattcc ttagaagaaa taagctttaa acaagctttt
     2521 tgtataggta tttttcaatc tttagccatg attcctggca cttcaaggag tggagcaagt
     2581 attattggtg ggcttttgtt aggatttaat agaaaagtgg ctgctgagtt tagttttttg
     2641 cttgccattc caacgatgat tattgctaca gcttatagta tttataaaga gcctgaatta
     2701 ctgagtaatg caaattcttt aattccttta ggcataggtt ttatcactgc ttttgttgtt
     2761 gcggttttag ttataaaatt tttcttaaaa tttatttcta aattcgactt tatccctttt
     2821 ggaatttatc gtattatttt aggatttgtt ttcttttatt tgtattatag tgggatttta
     2881 aatgctggaa gtgaatttaa gctataaata aatattaaac ttattctaag atttttttta
     2941 aaaataagct gaatttcaaa aataattaag tcttagaaag ttaaaattag aactttataa
     3001 acactcacag ggtaagtgag cgacaaaggg ttaaaaatat ggaaaaagaa gttattgcgt
     3061 atttggacaa tgagacaata attgactctc aaagtgtgaa aaatacaaat ttaaaagaaa
     3121 tttattttga taattctaaa gaaagtttag aggtaatccg tcattcttgt gcgcatttaa
     3181 tggcacaggc gattaagaat ttgtatcctg aagctaaatt tttcgttggt cctgttatag
     3241 aagatggatt ttattatgat tttcgtgtag aaagtaagat tggcgaagaa gatttagtaa
     3301 aaattgaaaa aaagatgaaa gaacttgctg aagcaaagat tgaaatttca aaatatgaaa
     3361 tcacaaaaaa cgaagctttg gctaaatttc aaaatgatga tttaaaacaa gaagttttat
     3421 tgcgtattcc tgatggagct gtaagtattt ataaacaagg tgaatttgaa gatttgtgtc
     3481 gtggtcctca tgtgccaaat acgaaatttt tacgcttttt taaactcact cgtgttgcag
     3541 gagcgtattt gggtggcgat gaaaaaagag aaatgcttac tcgaatttat gggactgctt
     3601 ttgcagataa ggaaagttta aaagagtatt taaccattat tgaagaagct aaaaaacgcg
     3661 atcatagaaa gcttggaaca gagcttaaac tttttacttt tgatgatgag atcggaggtg
     3721 gtcttcctat ctggttgagt aatggtgcaa gacttagatc taaacttgaa catatacttt
     3781 ataagatcca tcgtttgcgt ggttatgagc ctgtgcgtgg acctgagctt ttaaaagcag
     3841 atgcatggaa aatcagtggg cattatgcaa actataaaga aaatatgtat tttacacaaa
     3901 ttgatgaaca agaatatggt attaagccta tgaactgtgt ggggcatatt aaaatttatc
     3961 aaagtgatgt aagaagttat cgtgatttgc ctttgaaatt ttttgaatat ggcgtggtgc
     4021 atcgtcatga aaaaagtggg gttttgcacg gactttttag agtgagagaa ttcactcaag
     4081 atgatgcaca tattttttgt atgccaagtc agattaaaga gcaggtttta gaaattttag
     4141 cttttgtgga taatttgatg aaattatttg attttagcta tgagatggaa atttcaacta
     4201 aacctgaaaa agccataggt gatgatgaaa tttgggaagt ggcaactaag gctttaaaag
     4261 aagctttaga tgaacaaggt ttaaaatacg gtattgatga aggtggcggg gctttttatg
     4321 ggccaaagat cgatattaaa atcaccgatg ccttaaaaag aaagtggcaa tgtggaacta
     4381 tacaagtaga ttttaaccta ccaagtcgtt ttaaactcga atatactgat agtgataatg
     4441 aaaaaaaaca acctgtaatg ttgcatcgtg cgattttagg ttcttttgaa agatttatag
     4501 gaattttaac cgagcattgt gcgggtgagt ttccattttt tatcgcacca actgcggtgg
     4561 gtatagtgcc aataggcgaa gcacatattg cttacgcaaa agaaattcaa aaagaattat
     4621 tagagcttaa tatcgatagc gaggtgtatg aaaaaaatga gagtttaagt aagaaaatac
     4681 gcacagctga aaaacaaaaa ttacctatga ttttagtttt aggcgatgat gaggtggcaa
     4741 agcgtagcgt tgctttaaga gatagaagag ctaaagaaca aaaaaatctt agcttagatg
     4801 aatttattaa attagttaag gagaaaatga gtgaggtaca cttttgagta aagaaaaaga
     4861 agtattgctc aatgaagaaa taagagcgga tgaaatcaga tgtgttggcg atgatggcaa
     4921 ggtttatggt attattagta gtgatgaagc tttagaaatt gcaaatcgtt taggacttga
     4981 tcttgtaatg atagctgcag atgctaagcc acctgtttgc aagatcatgg actatggtaa
     5041 attccgttat caacaagaga aaaaacaaaa agaagcaaag aaaaaacaaa aagtgattga
     5101 tataaaagaa atcaaacttt ctgtaaaaat tgctcaaaat gatattaact acaaggtaaa
     5161 acatgcttta gaatttttag aacaaggtaa acatgtgaga tttcgtgtgt tcttaaaagg
     5221 acgtgaaatg gcaactcctg aagcaggtgt agctttgctt gaaaaaattt ggactatgat
     5281 agaaaatgaa gctaatcgtg acaaagagcc aaattttgaa ggtcgttatg taaatatgct
     5341 tgtaactcca aaaaaagctt aatccacttt tgtggataag gcttttaaag gttttaaatt
     5401 ttgaaagaaa atccttcttt tttaaaagag caaattataa cttatcttgg aaataaaaga
     5461 gcgcttttaa gttttttaaa taagggcttt aaggtagcta aaaaagaact tggtaaagat
     5521 aaatttagtt tttgtgatat atttagtggc tcaggtgttg taagtcgttt tgcaaaagcg
     5581 cactcaaatt atattttagc caatgattta gaggattatt caaaactcat caatgagtgt
     5641 tatcttgcca ataaagacaa agatttactt caaaatataa aaaagcatta taaaaattta
     5701 atccaaaatt tagattttca aaaaggtttt atcagtgagc tttatgctcc aaaagatgat
     5761 gatgatatta aaaaaaatga aagggttttt tatactttta aaaatgcttt atatcttgat
     5821 actataaggc aaaaaatcga aaatgaaatt ccaaaagaat tgaggcattt ctttatagct
     5881 cctttgattt atgaagccag tgttcattca aatactagtg gagtttttaa aggtttttat
     5941 aagggtaagg atggcatcgg aaaatttggt ggcgaaggac aaaatgcact taaacgaatt
     6001 aaaggagaaa tagagcttaa aatgcctatt ttttcaaatt tttcttgtga atttgaagtg
     6061 atgcaaaagg atgcaagtat gcttgcaaaa gaacttgatt tttttgatgt agtgtatctt
     6121 gatccccctt ataatcaaca cccttatagt tctaattatt ttatgctaaa tttaatcgca
     6181 aattataaaa aacctgaaga aatttctaaa atcagtggca ttccaaaaga ttggaaccgt
     6241 agcactttta ataagccaaa atttgcccaa gatgctttat ttgaacttat taatgattta
     6301 aaagcaagag tgattttact ttcttataat tgtgaaggtt ttgtaaaaaa agaaattttt
     6361 ttaaagcgtt taagtactct tggaaaatgt cggattttag aacaaaaata taatactttt
     6421 agagcttctc gcaatcttaa aaatcgtaat atccatcttc atgaacaact ttatatttta
     6481 gttaaaaatt aaattttgtg ctaaaattat atttataaaa aggagggatt tatgaaacta
     6541 aaattatctt tttgtgcatt aatggcattt ggtttttcta attatctttt tgcttcggcc
     6601 attgatccaa agttttattt tcaagaatat cttgattttg ctagcaataa gggtaaattt
     6661 caagtaggtc aaattggctt tgaaatttta gcaaaaaatc ctaatcaaaa catctctttc
     6721 aatgtaccta tgattgattt ttctacttca aatcgtggag gaaaattcca aggagaattt
     6781 accaatatag gacaatctta tatagtcagt gcttctcata tgagtacaag ttcaaatact
     6841 ggggaagtaa ataaaggcta tgtgaaacaa ggtagtgttt tacactttgg aggtgtagca
     6901 aatagaatcg taagctcaag tgataatttt acttataaga aagaaaatgt ggattttgct
     6961 gttttaaaaa tgagtaagat caatctcaat aaaagtgcaa atttgagtaa agatttcaat
     7021 tttattgaaa aagattctgg cgatggtgga gatatttatg aatacaagga tcctttttgg
     7081 gatagttgtc aaagtggaaa atgtgattat tctaaaggca aaggcaagct ttttgatagt
     7141 tcgcgttatg agtactttgt aagagaggga agtggtattg tagctttagg ttttgaagat
     7201 acaaataaag tacccattaa gatttttgat tctaatgaaa ttaatttagg aggttttgtc
     7261 agtttagctc ctaaaaatac tgaagataag cgttttaagt tgcaatttct taattatacc
     7321 aatgataaaa gaaatccttt tacaagttct tcaacacctg gggattctgg aagtggagtt
     7381 tatgtttatg ataagattga taaaaaatgg tatttagtag gtgtagtaag tacgagtaat
     7441 tgtaatgccc attttactga tggatatact tgttcacagg ttgattatgc tttgatcaat
     7501 caagcaaaga tcaatgaatt tcaaaatagc catagggtta atatcgcaca aggcgtttat
     7561 actttaagca atcaaggttt gatgaaagaa gggcagttgg tgcaaggtgt tagcttaatt
     7621 tctggggcta atgcgggtta tgtaagttat gaaaatattt ttggtgataa ggctaaatat
     7681 gatgatagaa tcaaagaaat gcaaaatagc aaggatttgt atttttttca aaatggaagt
     7741 ataaatttaa atagcgatgt ggatttaggc gctagtgttt taaattttga acaaaattca
     7801 aattggcaaa taacaggcga taaatggctt atacatggag gaatttacgc tgataagggt
     7861 tcaagtatag aatataatgt taaaaccaaa aaagatgatt ttctttataa aatgggcgaa
     7921 ggagaactta ttgtcaaaag tcaaagtgcg gatgcaggac ttaggatggg tgagggtaag
     7981 gtaagtcttg agggtgaagg tttaagtttt ggtgaaattt atatgaatgg tggaacttta
     8041 gggtttaaaa acgcacaaaa tttaaaaacc gacactttat atatgaatgg tggaactttg
     8101 gatctatcgg gcttaacatt aaatttttga tcaaattaaa gccaattcta ataatgtttt
     8161 tatcacaagc tctaaagcag gggcaaattt aaatttagaa aacaagcaaa attatcttta
     8221 ttatggcaat attttttcag atgaggccat aacaattagt gctaatacag ataaagcttt
     8281 gatttttgat ggcaatattt acaataaaga aggtgttttt aaggcagaaa acgccaagtt
     8341 aaattttcaa ggacatgcta gaatacacgc ttatgtaagc gaagaacaag ctaaaaaact
     8401 tcaagagcaa ggtttaagtg ctttaaccaa acctgtaagt tttacacaag aagattggga
     8461 agatagggtt ttttgtttta aaagagctta atttagaaaa aagcgagttt tatttaggac
     8521 gtaatgcaag cttaaaagta gaaaatctta atgctaaaaa ttccaaaata gagcttggaa
     8581 gtaaaaattt gtggatcgat gaaaaagatg gggaaaatat cactgataaa gttcaagata
     8641 gtttttatgg agacgttgca caaacaggag ttggtaaaga aatgggattt gagcaaaatc
     8701 ttaaaaatac ccaaaatgct aagatagaaa aggtttattt tagtggaaat ttaaatcttg
     8761 atcattctga tgctacttta caaaacatag tttttagcgg taatattaaa ggtgttgatg
     8821 atgcacaaaa aaatcttgtg attaaagatt ctttgcttga gtctaatata caaatgagta
     8881 atattcaagc agaaaaaagt gccatttatg ggaaagttga tgcaaaaaaa ttaagtgcaa
     8941 ataatacaat atttaaaatc aatgtggatt ttgaaaaatc taaggcagat tatattaatt
     9001 ctaaggaaag cgcgcaagga acaaataata ctttagtatt aaatttttta acaatcctag
     9061 caaagaagcg ggtttaaata tattactagc tcatttaaaa gatgaaaata aacatttaac
     9121 aaaggaattt tttactatac caaatgtgga gcaaggtttt agtatttata ccccaaatgt
     9181 tgttttttct tacaatgagg aaaattttgc ccagtggaat ttagaaaaaa ttgattctaa
     9241 aactaaagat gagtattttt ttactaatga taatactcaa gctattgcaa aagctaaatc
     9301 tatacttgct caagctactt tgggctccat gatagaatgg aataatatgc ataaaagaat
     9361 gggagaatta cgcaataatc cttacgaaag tggggtgtgg ttaagaactt ttggtggggg
     9421 tacgagtgat gagtataata gtggaaaata ctttgaaatt caaagcggat atgataaatt
     9481 aaacgagtat tcgaatttcg agctttatag cggggtgatg atcaattata caaatatgaa
     9541 tttaagtgct actgatttga gtgcgaaatt aaatggttat ggaataggac aatattttag
     9601 ccttttgttt aatgaaggtt tttatagtga ttttgtttta gatatattta ttatcaaaat
     9661 gaaataaatg caaattttat tccaggaaat caaggtagat tagatgataa tgatggttcg
     9721 cataatatta tcttaagtgc tgagttaggt tatagaaaag cttataataa attttatctt
     9781 gagccgagtt tggaatttat cagtggttat gtaggagcta tggatctaaa aggagatatt
     9841 gctagtttaa aacgattttc ttatattcct ttagtcgtaa aaacagcatt tttcatagga
     9901 agtcaaaatt aaaatttaaa ttttagaaca ggacttggtt tgtatgcgga tccgattaaa
     9961 gcaggagatc aaatcttgga ggatcaagca agtcagagaa gatatgaagg aaaaaagatc
    10021 aaagaatgtt tataaattta ggaaatgatt ataagcttaa cgataaaaca cgctttagtt
    10081 ttgaatttga aaagacattt tttggcgatt taaatgtaga ttggagtgca aatgctaatt
    10141 taagatatag tttttaaata aaaaataatt taaaaattgt atttttattt taagcttttt
    10201 tgtttataat acttgctttt acatttaaag gatagagatg aaaataaaag ttgggatttt
    10261 aggagcgagt ggttatgcgg gaaatgaact tgttcgcatt ttgcttaatc atcccaaggt
    10321 tgaaatttct tatttgggtt cgagttctag cgtggggcaa aattatcaag atctttatcc
    10381 taacacccct ttaaatttat gttttgaaaa taaaaattta gatgaacttg aacttgatct
    10441 tttgtttttg gctactccgc atgaatttag tgctaaactt ttaaatgaga atttattaaa
    10501 aaagatgaaa atcattgatt taagcgcgga ttttcgtctt aaaaatccta aagattatga
    10561 gctttggtat aaattcactc atcctaatca agagcttttg caaaatgcgg tttatggact
    10621 ttgtgagctt tataaagaag agataaaaaa agcaagttta gtggcaaatc caggttgtta
    10681 taccacttgt tctatcttaa gtctttatcc gctttttaaa gaaaagatca ttgattttag
    10741 ctcagttatt attgatgcaa aaagtggagt aagtggagca ggaagaagtg caaaggtgga
    10801 aaatcttttt tgtgaagtta atgaaaatat caaagcttat aatttagctt tgcatcgcca
    10861 tactcctgaa attgaagagc atttaagcta tgcagccaaa aagaaaatca ctctacaatt
    10921 tacccctcat cttgtgtcta tgcaaagagg aattttaatc agtgcttatg caaatttaaa
    10981 agaggatttg caagaacaag atatacgcga tatttataca aaatactatc aaaacaataa
    11041 attcataagg cttttaccgc cgcagtcgct tccgcagact cggtgggtta aatcaagcaa
    11101 ttttgcggat ataaatttta gtgtagatca acgcacaaag cgtgttattg tgcttggtgc
    11161 tattgataat ttaatcaaag gtgcagcagg acaagctgtt caaaatatga atttaatgtt
    11221 tgattttgat gaagatgaag gacttaaatt ctttgcaaat ttgtaaagga taaaaatgtt
    11281 aatacgagct atgcaaaaaa gcgattatga agccgtttat aagctttggt gtgagataaa
    11341 aggctttggg ataagaagca ttgatgatag taaagaaaat atagaaaatt ttttagatag
    11401 aaacccaaat cttagcgttg tagcagtgat tgatgaagaa attgtaggaa gtatactttg
    11461 cgggcatgat ggacgcacag gaggatttta tcatgtatgt gtacataaag atcatagaaa
    11521 aaagggcata gcgcacgaga tgacaaaatt ttgtcttgag gctttaaaag ctcaaaaaat
    11581 caataaaatc gccttaatcg cttttaaaaa caatgattta ggcaatgagt tttggaaaca
    11641 ttatggtttt actttaagag aagatgcgaa ttattacgat ctttctttaa atgagtataa
    11701 tcaaactagc tttaatgctt aaggaatgat catgcaaaaa tatttagaaa aagctaatgt
    11761 cttaatcgaa gctttgcctt atatacgcaa atttaattct aagattatac ttataaaata
    11821 cggcggatca gctatggaaa atgaagagct aaagcattgt gtgatgcaag atatagctct
    11881 tttaaaactc gtgggtttaa agcctattat tgtacatggt gggggaaaag atatttctgc
    11941 tatgtgtgaa aaattaggcg taaagagtga gtttaaaaac ggtcttaggg ttagtgataa
    12001 agccactact gaagtagcca gcatggtttt aaatcatatc aataaaaatt tagtccatag
    12061 tttgcaaaat ttaggagtta aagtcatagg gctttgtggt aaagatggcg cgcttttaga
    12121 atgtgtgaaa aaagatgaaa atttagcttt tgttggcacg atacaaaagg taaattcgaa
    12181 aattttagaa gagcttttag agaaagattt tttacctatc attgctccta ttggcatgga
    12241 tgaggatttt aatacttata atattaacgc tgatgacgta gcttgtgcga tcgccaaggc
    12301 tttaagggct gaaaaacttg cttttttaac cgatactgca gggctttatg aggattttag
    12361 tgataaaaat tctttgattt ctaaaattag ccttgaacaa gctaaaattt tagcccccaa
    12421 aatagaaggt ggtatgcatg taaaattaaa atcctgtatt gatgcttgtg aaaatggagt
    12481 caaaaaggtg catattttag atggacgcgt gaagcattct ttattgcttg agttttttac
    12541 tgatgaaggt ataggcactt tggtgggtta aaggatgaaa atggattata aagaacaaag
    12601 tcatattgtc cctacttata agcgttttga tatagtttta gaaaaagggc agggggttta
    12661 tctttttgat gataaggcta aaaaatatct tgatttttca agtggtatag gtgtttgtgc
    12721 tttaggatat aatcatgcta aatttaatgc taaaatcaaa gctcaagtgg ataaactttt
    12781 acatactagc aatttatatt ataatgaaaa catagccgct gcagctaaaa atttagccaa
    12841 agctagtgct ttagagcgtg ttttttttac aaattctggt acagaaagta tagaaggagc
    12901 gatgaaaaca gctagaaaat acgcctttaa caaaggtatt aagggtggac aatttatcgc
    12961 ttttaagcat tcttttcatg ggcgtacttt aggggcttta tcgcttactg ctaatgaaaa
    13021 atatcaaaag ccttttaaac ctttaatttc aggggttaaa tttgcaaaat ataatgatat
    13081 ttcaagcgtt gaaaaactgg tgaatgaaaa agcttgtgcc attatcttag aaagcgtgca
    13141 aggagaaggt ggaataaatc ctgcaaataa agatttttac aaagccttaa gaaagctttg
    13201 cgatgaaaaa gatatattat taatcgctga tgaaattcaa tgtggcatgg gtagaagtgg
    13261 aaaatttttt gcctatgagc acgcgcaaat tttgcctgat atcatgactt cagctaaggc
    13321 cttaggttgt gggcttagtg tgggtgcttt tgtaataaat caaaaggtag caagcaattc
    13381 tttagaagta ggcgatcatg gtagtactta tggtggaaat cctttagttt gtgcaggagt
    13441 gaatgcagtt tttgaaattt ttaaagaaga aaaaatttta gaaaatgtca ataaactcac
    13501 gccttattta gagcaaagtt tagatgagtt gataaatgaa tttgattttt gtaaaaaacg
    13561 caaaggctta gggtttatgc aagggctgag tcttgataaa agtgtaaaag tagctaaggt
    13621 cattcaaaaa tgtcaagaaa atgcactttt attaataagt tgcggggaga atgatttgag
    13681 atttttacct cctttgattt tacaaaaaga acatattgat gaaatgagtg aaaagttaag
    13741 aaaggctcta aagagttttt aataaatttt gtaaaaaaat tttattcttt tccatctact
    13801 ataggcacaa ataaacattc ttctaaaatt tctttttgta aatttgtgcc attttttcta
    13861 aggcgtgtga tgaattgttt gccattgtgt aaaataggag cgactaaaat accgtcatcg
    13921 cttaattgat caagtaaaat ttcaggaatt tgtgtcgcat aagcagaaaa taaaatccta
    13981 tcataaggag cataattttt ccagccattt tgtccatcat caaattttac attgatatta
    14041 aaaagttcta attctctgaa agtttgagcg gcttttttgg ctaaattttc tatgcgttct
    14101 atggtaaaaa cacgccttat gactttgctt aaaatcgcag cttgatagcc acttccacaa
    14161 cctatctcta aaatactatc agcattttta aaatctaaag ccatagtcat tttagctaca
    14221 gttaaaggtg aactaatcca ttgagaattt gctaaaggca aagcatcaag gcgataagca
    14281 tgggctttta aaggagaaaa aatttcacgt ggaatttgac aaaaagcatt aaaaagttct
    14341 tcattgataa aaactttttg tgcaatttct tcagccatat tttgacatct tttttgttca
    14401 aatgtgttca ttacttctcc tataaattta aataaaaatt gtaactaaaa aagttgaaat
    14461 agagttaaac ttagctatac ttaaataaaa aggaaaaaaa tgcttataaa atttaaaaat
    14521 catagtccca aactaggtca aaatgttttt gttgcagagg gcgctaaaat cataggagaa
    14581 atagaaatag gagatgaaag tagtatttgg tttaattgtg ttttaagagc cgatgttaat
    14641 tttataaaaa ttggcaaaag aaccaatatt caagatctta gcacggtaca tgtttggcat
    14701 agggaatttg ataaaaaagg aaagttaaaa gatgctggtt ttcctacgat aataggagat
    14761 gatgtaacta taggacataa ttgcgttatc catgcttgtg tgataaaaaa tcgtgtttta
    14821 atcggaatga atgctgttat catggatagt gctttgatag aagaagatag catagtgggt
    14881 gctggaagcg ttgtaacaaa gggtaaaaaa tttccgccac gctctttgat acttggaaat
    14941 cctgcaaaat ttgtgcgtga attaaataat gaagaaataa actttctaaa acaatccgct
    15001 ttaaattatg tggattttaa aaacgagttt ttaaaagatc ttcagtgata ttttgaagtt
    15061 taggcgagag ttttacttca aatttcacaa aacgatcaag atctaaaaaa ctctcatcga
    15121 gttttgaaat ttgctctttt gtataatctt gaatagtatt taaagatgac tttttaagaa
    15181 gtcttttttc tttgtagact aattctaaaa gttctttgcg ttctaaattt tcatcttgat
    15241 ttgggttttc gtcaaaaaca taaagctcat caaaaaggat tttttgcgtg tttttatcat
    15301 aaaccctaaa aagcttttta aaatgaggta gggttgattt ttcgttattt tcgctgattt
    15361 tgattttagg ttttatgcct tgatcttcta aggctgcgag tttataaacg caactaaaaa
    15421 taggatcgct tgaagcagtg atcaatcttt cgcctacacc aaagatatca ataggtgcat
    15481 tttgttcttt gagtttttta atactccatt catcaagggc gttagaaact atgattttac
    15541 atttttgaag tcctgcttga tcaagttctt gtctgatttt caaactcaac ttaagtaaat
    15601 ttccagaatc tattctgaca ccgccttctt ggataccaaa ttctttaaaa actttaatcg
    15661 catttttaag tccgctattt agacaatcat aagtatcgat caaaaaaaca ggattttttg
    15721 gataaatttt cacataagct ttaaaagctt caagttcatt ttcaaacatt tgcacccaag
    15781 aatgtgccat agttccattg atagggatat tataaatttt tcctgctaaa gtacaagcac
    15841 ttcctatgca acctcctata aaagctgctc ttgctccttt taaggctgct tcacttcctt
    15901 gtgctctgcg tgaaccaaat tctaaaattt tactgtcttt agctgcacgc acgatacgat
    15961 tggttttggt agcaataagg ctttggtggt ttaaacttaa aagtaaaaaa gtttctaaaa
    16021 gctgtgcttc tatggttgta gctttaacgc aaagtaaagg ttcgtttgga aaaatcactt
    16081 ctccttcgcg catagcataa atttcaccct taaatttaaa gttagttaaa aaatctaaaa
    16141 attctgtatc aaaaatacct tgttttctta aaaattctat atcttctgca tcaaaactca
    16201 aattttcaac aaagtctaaa atatcttcaa gacctgcaaa aatagcaaaa gaacctgaat
    16261 ctggaatttt tctaaaaaat atatcaaaat aacaaatttg atttttttta ttgtttttga
    16321 aatagccttg agacattgta aattcataaa aatcacaaag taaggctaaa gaagttttag
    16381 aagtcatcaa agcttatact acccttagaa taattcgtta ctttactttc aaagaaattg
    16441 ctcttttgat cgttaaattt tgaaaaatca tctacccatt taataggatg ttttgcattg
    16501 tataacttat ctaaattgat cgcacttaat ctttgatcta caagataatg gatatattct
    16561 tctatgatat catcagtaaa gcccatgatt tgattttgag tgatgtattt accccatttg
    16621 atctcaagat ctccagcttt tttaaacata tcataaattt tattgatatt ttcatcatgg
    16681 aacaaatcag gtctttcttt gcgtactgaa ttgatcatat tttgaaataa taaaagatgt
    16741 gtgatttcat ctctttggat aaagcggatc atttgtgctg aacctagcat ttttcctgca
    16801 cgtgcaagtg cgtaaatggc agtaaaacca ctataaaaat atactccttc taaaatttga
    16861 tttgccacca tagccaaaag aagtttatta tcatctacat cgcctgctaa ttcttcataa
    16921 atgcttgaaa taaagtcatt tttttcacgc aaagtttcat catgcttttc catttcataa
    16981 atcaaatctg tattatcgca aatcgcttca accataacag cgtaagattt tgaatggttt
    17041 gcctcttcat aagcttggcg tgctaaaacc gcattgattt caggagctgt gatgtaaggg
    17101 ttgatattgt ctgctaaatt attggtttga aaactatcca tagaaataag ctgactccaa
    17161 accaaatcat acattctttt ttcacctaca gttaaattac agcgataatc aagtgcatct
    17221 ttagttgtat ccacttcttt tggaaaccaa gtatttgcct ccattaaatc ccaaagtttt
    17281 aaagcccagg tatattttgc cttagtgaaa tttaaaattc catgtgggtt accatcaaaa
    17341 attttacgat ctcctagggt ttcgtttgag tttggattgt aaattctttt tctttgcatt
    17401 tttaaccttt ctttatgctt ttagtagcta tacaactttg agttaaaata tcgtgtaaat
    17461 ttaaacgatc ttttcttaca aaactgacaa ataaaccaaa gagtaagcca aaacttataa
    17521 taaatatcac atatcttagt aaaattctaa gaaaacttag tttctttccc gtttttatat
    17581 caataagata taaatcatat gctttaagac ctgggctttg tgcctttttt gttaaaaaaa
    17641 tagcttgaat caagccaaat aaaaaagtac ataaagttgt gataaaatgg ttgtttaaaa
    17701 aagcttcttt agagcctaat agaaaataaa ataaatacaa aataggaata taaataagaa
    17761 aaatatctat aagcaaagct ctaaatctta gccatctaga gctaattttt gctttagttt
    17821 tcatttaatt tccacgactt cctggtttta tagctttact ccctttttta caaagtggac
    17881 aatttgtttc atcgtaaatt tcaaattcaa aatttcctag agtaaagagt ggtaaatttt
    17941 caggtaattt cgcattatct tttcttggag attttaaatt ttctactgca caaaaaccac
    18001 gatttgccaa tgctgcaaaa cctacaacaa tgccacctaa actttcaatg atttttgcac
    18061 tctctaaagc actaccacct gtagtaatga tatcttcaca aattataaat ttttcactct
    18121 tttttacctc aaaaccacgt cttaaagtca tttctttatt tactctttcg gtaaagataa
    18181 aacgtttact acaagctctt gcaagctcat aacctgctaa aattccacct aaagcaggag
    18241 aacaaatgct atcaaattct atcttatagc ttgtaataat ctttgcaagt tcatcacaaa
    18301 gttttgctgc taattttgga tcctctaaaa cttttgcact ttgaagataa aattgcgaat
    18361 gtttacctga acttagtaaa aaatgccctt ctaaataagc accacaatct ttataaattt
    18421 gctctaaatt catcgttaaa cctttaaaag ttcactttct ttgtttttta cactctcatc
    18481 aatttttgtt gtataggtgt cggtaagttt ttgcacttca tcataagctt tttttgcttc
    18541 atcttcgctt attgccttat ctttttctag ttttttaact gcatcgttgg catctttgcg
    18601 tatatttctt atagaaactt ttgccttttc acccatagct ttagcttgtt ttacattttc
    18661 ttctctttgc tctctagtca tcggagggaa aaataatttt acactttcgc cgtcattgtt
    18721 tggatttaca ccgatatttg cagctgcaat agcgctttct atggttttta gtaaaggttt
    18781 ttcccaagga gtaatactaa tagttgaagc atcacttgct aaaacagttg ctacttgatt
    18841 taaaggagtt tgagttccat aataatccac tgtaatatga tctaaaatat gggtattaac
    18901 ttttccagtt cttaaagtgg tgaagtcttt ttttaaggct tctaaagatt tttcactttg
    18961 ggttttttgt ttgttaaaaa tttcatttag cattatcatt tcctttaatt atttacttga
    19021 attaacatcg cttggaagtt gtggtgcact tggagcgata gaatttgtgt ttggggtagc
    19081 aggcacaata ggagcacttg gaatagtagt attgttgttt tctactttaa ttttctctgc
    19141 tagagagtct ttgctagctt tattgtataa ataaccaaga ccaatagtat ttgcaataag
    19201 taaaattccc ataacaaagg taaattttgc caaaaatcca gctggtcctt tggcgccaaa
    19261 taaactttca ttgcttccac tataagctcc aagtcctata cttgaacttt tttgaagtaa
    19321 aactgctata caaataacta caacgatgat aaattgtaaa atgattaaaa gagtgatcat
    19381 tgaaaattcc taaaagttaa tttttaaatg attattttag ctaaataaaa cttgaaaagt
    19441 tttgaaactt gaaaagtttt tgtgagaaaa atcccacaaa aatttatctg ctattgaagc
    19501 ttcttaagat attaagtaaa gatacgaaaa gattaacaaa atcaagataa agtgctactg
    19561 caccttcgat tggagtttca taatttccgc ggataatatt ctgcgtatca taaagaatgt
    19621 aaaatgaaaa taatattgca gctactgctg aaatagctag attaactata ctgctttgga
    19681 agaaaaggtt tagtaaagat gctgctacaa taacgatcaa tactataaat aaagctttgc
    19741 ccataacagt aaaatctttt tttgtattca tagcaaatac gctaagtcct gcaaaagcaa
    19801 ccgttgttaa agcaaaagct tgagcgatga taattcctcc agctggtaga gctaaaactg
    19861 aaataagtaa aggtgtaagc gttaaacctg agcagaaagt aaaaccaaaa agtaaaacaa
    19921 gatttaatgg agcctctctt tttttccatt gcaaagcaaa taaaagtccg atttcaacag
    19981 caaaaaggat ccaaaaagtt acttgtgatt gtataaaaaa tgatgctaaa gcaaaaattc
    20041 ctacatacgc acctactgtt gcagctaata atgaagcagc aaaaagttga taagtttgtt
    20101 taataaaaat acttaattcg cttgagcgtg tattttcaaa ttcttttgat cttgagtagt
    20161 ctctatcata aagactcata aaattctcct tgcaaaattg ttagattttt taaaatcttg
    20221 agcgaaatct aacatattag actaaataaa aagttaattt atataatatc ttatgcttaa
    20281 atgaaatctt tgctgaaatt ttgttataat ttcaagattt tagtttcagg ttggttttat
    20341 ggaaaatctt attagcggtg cgattaagtt tatgcaagaa gactttaagg agcatgaaga
    20401 actttttgaa agtctaaaaa ataagcaaaa tccccatact ctttttatag gttgttctga
    20461 ttctagagta attccaaatt tgatcactaa tacgggtcca ggtgagcttt ttgtaatacg
    20521 aaatattgca aatatagttc caccttatcg cgttggagaa gattacttgg cgacaacttc
    20581 agcaatagag tatgctttaa attcattgca tattaaaaat atcgtcgttt gtggccatag
    20641 taattgtgga ggttgcaatg ctctttatta ttctgatgaa gagttaaata aaattcctaa
    20701 cgtgaaaaaa tggcttacta tgttagatcc gataaaaaaa gatgtgatga tttttgcaag
    20761 agacgatttg gctatgcgtt catggcttac agaaaaatta aatttagtaa attctttgca
    20821 aaatatactt acttatccag gcgtgcaaga agctttagat gaaggaaaaa tagaagtaca
    20881 tgcttggtat tatattatag agacaggtga aatttatgag tatgatttta aagcaaaaat
    20941 ttttacttta atacaggata ggaaagttca atgaaaaaaa ttatttttag tttatgtttt
    21001 tttattttat accttggagc acaagaattt aaatttattg atgcaaatat tagcaaagag
    21061 gatgaaggaa tttatgcttt agttgaaaaa tatgttgatc ttaacaatca aattaaagaa
    21121 tttaagaaaa acaatgatga aaattcaagc acttttaatg gtattttaag tgaatttgaa
    21181 aaagacaaaa agactatttt agcaaaaata cccgatatga tagtaggaca aaagattaat
    21241 gaagaggcag tggctagatt tttaaaagca aaagaaaaat tactagatgt tcaaaaaaag
    21301 aatattaata agccttatat ttatacagat gctactctta atctagttta ttttaatatt
    21361 gtggaaagtt tttattcttc tttgtttgaa gtggaaaaac tttttaaaaa tacagcaagc
    21421 agtgaagatt tgattgctac tgttgataag gcaatggaaa atttacaaaa ttcttctaat
    21481 gttaatttag atagttttaa aagcaaaatt acaaatccag aagaattaga aaaaattacc
    21541 ctaaaagaaa gatatatcag taatgctgta gattcttatt ctgaaattct taagtattta
    21601 cgctcaaatg cagatttgct tgaaagtaat tatatttttt cattactcga gcttcaagtt
    21661 tggatagatc gtataaatga ggcaattggg gtaagttttg ttaatatcgg aaaaatagta
    21721 atttctgctt tggttttagt attttttata tctttaagac gtttttttgc aaatatagta
    21781 tattttttcc ttgttcagct tttttataga aataaaaatg atgtagatga tattaaagtc
    21841 atttttattg agaatattaa aaaacccgta ggtttcttgt tgattgtcta tgctatttct
    21901 ctttgtctta ctatagcaac ttatcctgca cctttgagtg taaatttaag taattttttt
    21961 catatagttt atgcagtttt aattgcatgg cttattttaa gaatgcttga tggttatggc
    22021 gtggtattgg tttctaaact tgctcaaaaa agtggaaaaa aagaagttgt aaatttaatt
    22081 attaaaattt tatattttgt cattattatc atagctttat tatatattct tgctcaactt
    22141 ggttttaata tttcggctat tattgcatct ttgggaattg gtggtttagc tgttgcttta
    22201 gcggcgaaag atatcattgc aaatttcttt gcttctatac tcttactttt tgataatagc
    22261 tttaatcaag gagattgggt agaggtttca ggcatagaag gaaccgtggt tgaaacagga
    22321 cttagaaaaa ctactattag aacttttgat aattgtcttg tatttttacc aaattcaact
    22381 attatgggag ctaatatcaa aaattggagc aaaagacgca tgggtcgcca tgttagaatg
    22441 tatttgggtg ttggttatga tgctactcct gaaaaactag aacaatgtgt aaaagatcta
    22501 agagaatttt tgcatacaag tgatttagta gctcacgatg aggatagcgc attaaaatat
    22561 ggcgatcata caacaaaata tcgtcaaaat cttgtatcta ttaatgattt agaaggctat
    22621 aaaaatgctt gttatgtggc tttaagtgaa tttgcagata gtagtattaa tatagagctt
    22681 tatttttata ccaaagaaat aggcggaaaa gattttagag aagctagaca aagtttaatg
    22741 cttgagttta tgcgtataat tgaaaaaaat ggtttaacct ttgctttccc aagtcgtagt
    22801 atttatatag aaaatttacc accccttgat ttgcaagcaa aagctataaa atagcaagat
    22861 tttatcttgc tattttttta aactggcata acgcgtatat ttggacttaa ttcttcttgt
    22921 aaaattgttt caatagcata aagtgttgca ccacttccac tagaacaacc actacaagca
    22981 ccaagataac gaatataaac atcaattgct gcaccttcag ccttttgtat atcaatcact
    23041 tccaaatctc caccatcatt atgaagcata gggcgaattt cagcatctaa aacactttca
    23101 actgctttta attgtcccac tacggtcatt tcatcaaaag ccacatcact tttcattgta
    23161 tttttgagtt tttctctatc tatttcagct ctagtttcag ctaaaatatc tacaaggtaa
    23221 taatctcttt tttcatgtcc gcctggtttg atacaggatt tacaaaaagc acccgcttta
    23281 gtatattgtg tgatttcttc tacgctatgc aaatcattaa gtttaatcac ttctttaata
    23341 gttccaagac ttaccctagc gcactcgcaa actataattt gatcttcaaa atcttcagga
    23401 cttatacctt tataatgcgc tgctgcttgt ttgattacat cataagccat aaccgaacag
    23461 tgcatttttt gaggtggaac agctggagtt tctggattat cacgcatagc aaattccaca
    23521 tctaaatttg tgatttttac tgcttcatct acagtttttc ctatacaaag atccaccata
    23581 gtatcactac ttgctatagc tgtaccacaa ccaaaacttt taaattttgc atcgataatt
    23641 ttatcagttt tttcatctac aagccaaaaa agtcttaccg catcgccgca actttctgcg
    23701 ccaaaatcag ctacgatcaa ttttgcattg cgtgctttag catcttcttc actaaattct
    23761 cccatatgtt gaggattatt cattctatct tgaacttttt gtgaatactc atcccaaatg
    23821 gatccaccaa ttaaactatt ttttcccatt tttcatcctt atttgtaatt atttggatta
    23881 taagcataag tgcaagaaat tgctcttaat ctctgtgttg catttttaat ttgttttgct
    23941 gcataatcaa tttcttcttc agtgttaaaa cgtgacaaag aaagtcttaa agctgtgtgc
    24001 gctaaatcat gttccgcacc gatagcttcc ataataggat tgctttctaa agcttcgctt
    24061 gcacaggctg agcccgtact tgcagctata ccatttttat ttaaatccca aagcatcgct
    24121 tcgccttcaa cgcctttaat acttgctaag attgtattag gcacacggtg ttcccttttt
    24181 ccaaccactg ttgtatcagg taaagctaaa atttgatctt ctagtttatc tcttaaacgg
    24241 cgtatatgag aatcttcaaa atcaagcata gtatttgcaa tacgcaaagc ctcgcccata
    24301 gccactatgt aaggtacatt taaagttccg cttctacgac cacccatgtg ttctccaccg
    24361 tgtaaaagtg gagtaagttt aagtcctttt tttataaaaa gtccacccac accctttggt
    24421 ccatgaaatt tatgtgccga aaatgaagca aaatcaactc ctacttgagt taaattaacc
    24481 tttattttac ctactgcttg agtagcatcc gtatgaaaaa gagcaccaaa ttcatgcgca
    24541 agttctgcca tcgctttaat atcaaaaatc atacctgttt cattatttgc ccacataaca
    24601 cttacaagcg ctgttttatc gctaatcact ttacgcaaat cttctacagt agaaacccct
    24661 tcttcattta caggaagttc tatgactttt actccaagac tttttaaaaa ataagcagca
    24721 gcagcaacgg cagggtgttc tacgctagaa ataatcactt cattgcgttc tttatctaaa
    24781 atatgatcaa aatacacacc cttaagcacc cagttaatgc tttctgtcgc acaggaggtt
    24841 acaactatgt catctaggtc atttgctcca agtcctgcat aaagtttatc caaagcttct
    24901 cttaaggcag gatgtgttgc gctaccatat tgatgaaggc tatttggatt tccatacata
    24961 tcctttaaaa aaggtagcat caactcataa gcattaggat caagcattgt cgttgcgttg
    25021 ttatctaaat atactttcac tttaaaatcc ttaatttatc cttaatttta attaggatat
    25081 tttttatctt tatttgaaaa cggataataa caaaaattta taaaaattag gttaaaaatt
    25141 ataacaaaaa taaaatgcta aagtaaaatt ttaaagtgaa atattttgtg aattttatat
    25201 agcaaaaata agaaatacta tttcttaaat ttttcttcgt aatactttac tatctttgaa
    25261 tcttctttgg ctgtatgttt aaagataaaa tcttgaacaa cgatttaatt tttcggtcat
    25321 tatatttaca aatttagctt cactgatgat aatttcttca atttctaaga taatttttct
    25381 atgaattctt gtatgatggt tgatataagg atattctatt tctctcataa aggcttcttc
    25441 atctgaaaaa tgtctattga tcattatcaa caactctctt aagacaattt ttaactcttt
    25501 tgttccaaca tgacgttggt tcattaaaga gagtttttta gaaatttcaa aaagttcttt
    25561 atgttgatga tctaaaagat cattattcat cgaaataatt ttttcattat aagtcatggt
    25621 tttgagtact tttatattta tatttttcga gagcggat
//
LOCUS       DAPWGO010000013        24848 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.014, whole genome shotgun sequence.
ACCESSION   DAPWGO010000013 DAPWGO010000000
VERSION     DAPWGO010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24848
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.014"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(11..1858)
                     /locus_tag="RJ336_000486"
     CDS             complement(11..1858)
                     /locus_tag="RJ336_000486"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDZ5212954.1"
                     /translation="MSKKFAHTQEELEKLSLKELENLAASMREKIIQVVSKNGGHLSS
                     NLGAVELSIAMHLVFDAKKDPFIFDVSHQSYTHKLLSGKEEIFDTLRQINGLSGYTKP
                     SEGDYFVAGHSSTSISLAVGACKAIALKGEKRIPVALIGDGALSAGMAYEALNELGDS
                     KFACVILLNDNEMSISKPIGAISKYLSQAMATQFYQSFKKRIAKMLDILPDSATYMAK
                     RFEESFKLITPGLLFEELGLEYIGPIDGHNLGEIISALKQAKAMQKPCVIHAQTIKGK
                     GYALAEGKHAKWHGVGAFDIDSGESVKKSDAKKSATEIFSKNLLDLASKYENIVGVTA
                     AMPSGTGLDKLIEKYPNRFWDVAIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQ
                     VIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDEQMMQNI
                     MEYAYLHQGPIAFRYPRGSFILDKEFNPCEIKLGKAQWLVKNNSEIAFLGYGQGVAKA
                     WQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESLINN
                     FLQKYDLHVKVVSFEYEDKFIEHGKTSEVEKNLEKDVNSLLTKVLKFYH"
     gene            complement(1851..2681)
                     /gene="fliH"
                     /locus_tag="RJ336_000487"
     CDS             complement(1851..2681)
                     /gene="fliH"
                     /locus_tag="RJ336_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HDZ5212955.1"
                     /translation="MVNRSNVISGGASDQHVVEGYRFKVISEFDNHTGEKKHTQTPDE
                     ENANISLNDEKAVEENQAIAPTQAVMETQIPTFQPSFVEDLLKKTDEMSSNIIKLQMQ
                     IESQENEFNNRLNSELENAKEKFAKEGYEKAKEEFQKELSDFKDKYLKSIAKLDNACE
                     NLENFIEKNEKELADTAIDIAKEVILKELELNSSKIAYALAKDLIGELKGASAIELKV
                     NAEDYEYLKEQFDQNAHIKISLDDAISKGSVVIISDAGNIESNLNSRLTKIKKMVNNE
                     "
     gene            complement(2689..3717)
                     /gene="fliG"
                     /locus_tag="RJ336_000488"
     CDS             complement(2689..3717)
                     /gene="fliG"
                     /locus_tag="RJ336_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HDZ5212956.1"
                     /translation="MIKLSEEQKMVYDDLSMPEKVAIFLIQLGEDATTSVFSHMEIDV
                     ITEISRYIAMAKNVDRSVATAVLEEFYTLLQSNQYIKSGGLEYAKEILFRTFGPEIAN
                     KILEKLTKSMENNQNFAYLAQIKPQQLADFITKEHPQTIALILAHMDSIHAAETLEYF
                     SDELRAEVVIRMANLGDISPSIIKRVSAVLESKLESLTSYKVEVGGPRAVAEVLNRLG
                     QKASKSTITYIEQSDERLAETIKELMFTFDDIQKLSTQAIREILKVADKRDLMIGLKG
                     ASEELKQKFLANMSTRASEAFLEEMGFLGAVRVKDVEDAQRKVVEVVQKLAEQGLVQT
                     GDADEMIE"
     gene            complement(3717..5399)
                     /gene="fliF"
                     /locus_tag="RJ336_000489"
     CDS             complement(3717..5399)
                     /gene="fliF"
                     /locus_tag="RJ336_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HDZ5212957.1"
                     /translation="MDFKNMLHQIGQLYQNLTRKQRIVIAASIVVVVGFLVFLALFRG
                     SGSNANNGYAVLVENVSPSSSAAIVAKLEQNNIPYKLESENKILVPQDQVYRQRMFIA
                     SEGLIKDSRVGFEAFDTQAFGATNEEQRVKYQRAIEGELARTIETLEPIRSAVVHIAF
                     PKDSVFTERQIPPTASVVVNVREGLKLTRKQIDGIKNIVSAAVPKLTKENVKISDQSG
                     VPLDEQEAYEDDLVRAQIKFKSDQEKALEDKIIENLAPFAGGMDKVKVSVNIDFDFSK
                     QESQSEIYDPNPIVRSEQTLNEERTGRKDPEIQGVPGAVSNIGPVEGLDNKGQIDTYK
                     KNQVTTNNELSKTITNTKKQFATVLRTSAAVTIDGKYQDVVDENGDVKSEYVPLTKEE
                     LASVESIVKNTINFSATRGDSVVVQNLPFHRESIRVESKVKTFYNRFVEPFIPPVKYF
                     IAAILLFIFYKKVIAPFTQKMLEDVAAQEEMQQGPNAVLDDAEDALEKFNAARKKVEE
                     QLGFGDNFNEDSIQYEVLLEKLRGLVSDKGEEIAALLQNLIQNDSEFGEKDM"
     gene            complement(5451..6545)
                     /locus_tag="RJ336_000490"
     CDS             complement(5451..6545)
                     /locus_tag="RJ336_000490"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDZ5212958.1"
                     /translation="MKFNEFLNHLSNYEPGKDIEVIAKEYGVKEVIKLASNENPFGTP
                     PKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHAKL
                     NSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHDLNEFKKLYEAHKDEIKLIFLCL
                     PNNPLGECLDASEVTKFIKGVDEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNV
                     LYLGTFSKLYGLGGLRIGYGIANANIINAFYKLRAPFNVSNLALKAAVAAIDDDEFTK
                     KTLENNFSQMQLYKEFAKKHNIKIIDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNL
                     KSYGLNAIRITIGTSYENEKFFTEFDKILR"
     gene            complement(6535..7608)
                     /gene="pheA"
                     /locus_tag="RJ336_000491"
     CDS             complement(6535..7608)
                     /gene="pheA"
                     /locus_tag="RJ336_000491"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HDZ5212959.1"
                     /translation="MPNLEEFRNKIDAVDDKILDLLNERMTYVKSIGELKQSSGGTIY
                     RPERERAIINRLKNANLGLLDQNAIEAIYQEIFAVSRNLEMPQTIAYLGPEGTYTHQA
                     ARSRFGAMSRYIALANIEDVFKELSNKEAKYGVVPIENNTEGAVGITLDCLGKYNELK
                     IFGEIYMDIHHSFVGINENLKEIKRIYSHPQGYNQCRKFLESHELSAIEFVPSKSTAN
                     AAYLASQDKYAAAICSKIAAKLYNVPVLFDKIEDNAANKTRFLILSDIKNPKMPNCKT
                     SILAHTAHKPGGLSFLLEQFKKENINLTKLESRPVKSKEFLHSFYIDFEGHIDDENVK
                     KALKDIQEIVWLGSYLSGEKDEI"
     gene            complement(7596..8363)
                     /locus_tag="RJ336_000492"
     CDS             complement(7596..8363)
                     /locus_tag="RJ336_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HDZ5212960.1"
                     /translation="MFFLDVQGTLISDHDKSLIHGAKELIDFLNAKNLPYLIITNNTK
                     KLDFLEKLQQKGLVIKENAYIDPFSVLKHLLRPCKVAAFGADEFVKSLENLGFELDFV
                     NPSAVLVASYDDFKFKDFATMIELARREVRFIAMHETSIYKKDGRPYPGVGSIMAMLK
                     NAIDFEYEVVGKPSIAFYKEALNLIRRQNSKIDFEDIKIISDDFRGDLLKAKELGMKT
                     LLVLSGKISDTKGLDTDLLDGVYPSVFEFLKDLKCQI"
     gene            complement(8365..9573)
                     /gene="lysA"
                     /locus_tag="RJ336_000493"
     CDS             complement(8365..9573)
                     /gene="lysA"
                     /locus_tag="RJ336_000493"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDZ5212961.1"
                     /translation="MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAV
                     KANSNLSLLQMLANLDSGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEY
                     DILYINLESEAEMMLLESVAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEI
                     DIARKMYLYAKNSSFLEPVGVHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKF
                     FDIGGGLGVAYEKDECEPDLYNYAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVL
                     YEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILPYNQGEESLCDVVGGICESGDFFA
                     KARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQ
                     IALEEKFLKA"
     gene            complement(9617..10675)
                     /locus_tag="RJ336_000494"
     CDS             complement(9617..10675)
                     /locus_tag="RJ336_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDZ5212962.1"
                     /translation="MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAAN
                     LDLLYVMFLSFSAVPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFL
                     WALFFCCIYIGMNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQ
                     NSAQNIKIFNINDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDF
                     SELKSLEGFKPKIIEGVASNSDYSISDALESFELFKAQNVNTDALKINLYKFVFTPFF
                     APFLMLIMYYFFPVIARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIV
                     VPIIILGCLSAYMYYKHR"
     gene            complement(10677..11222)
                     /locus_tag="RJ336_000495"
     CDS             complement(10677..11222)
                     /locus_tag="RJ336_000495"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDZ5212963.1"
                     /translation="MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFK
                     GELFKIGSSLLLLKPSTYMNNSGLSVKAVNDFYKCERMIVIHDDIDINLGALRFKKGG
                     SSGGHNGLKSIDTLCGNDYERVRIGVGKGENVISHVLGKFKSEEEITLSKVLEHAKKA
                     LLELIENDDLSAISSKYSLKA"
     gene            complement(11219..11755)
                     /locus_tag="RJ336_000496"
     CDS             complement(11219..11755)
                     /locus_tag="RJ336_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDZ5212964.1"
                     /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNE
                     FIKEVRKKTTLIFDVKVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPV
                     KITGTAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAG
                     VTMIDADRVAVVGVEKAR"
     gene            11889..12227
                     /locus_tag="RJ336_000497"
     CDS             11889..12227
                     /locus_tag="RJ336_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDZ5212965.1"
                     /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWHYILTAIGV
                     CISFTCFLKACERLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSIIKLVLIVILLLSI
                     IALKWISKEA"
     gene            12230..12544
                     /locus_tag="RJ336_000498"
     CDS             12230..12544
                     /locus_tag="RJ336_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDZ5212966.1"
                     /translation="MEWFYLFLATACEIFGVVIMKELVSTKNKLYLLALIVCFGFSFT
                     FLSLSMQNIAMSVAYAIWTGAGTAGGVMIGVLFYKESKSFLKLFLITVIIACTVGLKF
                     LS"
     gene            12554..13159
                     /locus_tag="RJ336_000499"
     CDS             12554..13159
                     /locus_tag="RJ336_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDZ5212967.1"
                     /translation="MQIYVSGIHTDVGKTHFSAAFCANFNYDYFKLIQAGTPTDSEFI
                     AKFSPKTKIFKEGIFLQTPASPHLGKIKEKLDYKALDIILPKSKNLLIELAGGLFSPM
                     DENYTMIDFVNIFKHPTILVAKYYLGSINHILLSIEALKQRNINLLALVMMGKKDILQ
                     DDFIKNYAKIPIINLDFFDENSILNKDFKEQMQEILQLKIP"
     gene            complement(13146..14429)
                     /locus_tag="RJ336_000500"
     CDS             complement(13146..14429)
                     /locus_tag="RJ336_000500"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDZ5212968.1"
                     /translation="MQNQILKNLDLKHIWHPCTQMKDHETLPLIPIKKAKGVWLYDFD
                     DKAYMDCVSSWWVNLFGHCNEKIANAIKKQVDELEHVILAGFTHEPIIKLSARLCEKV
                     GRNFNKCFYADNGSSAIEVALKMSFHYHLNKGVKKSKFLSLSNSYHGETLGALSVGDV
                     ALYKDTYKALLLECLSTPVPQGKDYTKELEILKDILEKNASEICAFILEPLVQCAGNM
                     HMYEARFIDEAIKLCHKFGVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITG
                     GFMPLSVVLTRDEIYNAFYDTYESQKAFLHSHSYTGNTLACAAANAVLDIFEDENILV
                     KNQILSEFIKKEFSRLEKFDFLGNFRTCGMISAFDILSTKYKRVGLFVFQKALEKGLL
                     LRPLANTIYFMPPYIITKEQIVYVLESLEQIFKEF"
     gene            14497..15639
                     /locus_tag="RJ336_000501"
     CDS             14497..15639
                     /locus_tag="RJ336_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HDZ5212969.1"
                     /translation="MKLEKILQDLEQNHNLRTLTPLKHENKFVYKQDHKLLNLVGNDY
                     LYLASSKELKAEFLNTLKEQDLFFSSSSSRSLSGNFEIYEKLESFLKTKFKDKEILHF
                     NSGYHLNISCIAALSSVSKTLFLTDKFIHASMIDGLRLGRADFFRFHHKDMNHLESLI
                     QKHYENYENIIVLSEALFSMDGDFSDFKTLCELKRRYDKIKLYIDEAHSVGCFDEEGL
                     GLVKKLALENEVDFLVFTFGKALASMGACIICDEKYKKFFINKARAFIYSTALPPINV
                     AWTQFIFKKMPYFKKEREKLELLSTFFKSKLQEKNHIVLGDAYIICLLLGENKKALEI
                     SQKLQKAGFFAPAIKEPTVPKNTARIRFSLHAGLNTEELERIIELL"
     gene            15636..16247
                     /locus_tag="RJ336_000502"
     CDS             15636..16247
                     /locus_tag="RJ336_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDZ5212970.1"
                     /translation="MKYEFLCKNPDSKKLIVVFGGFASHPSHFSHLKSDKNVILFYDY
                     ENFDLNFDFKAFDELFLIAFSMGVCVANRLLKELNFKQKIAINGTNLGIDKSKGIHPT
                     IFKKTLQNFKLEHFKETLFKERKSLAKDFIFKDEKALKIELEKLFDFALTKQEENLLW
                     DKVYSSKEDEIFPPNALKNSFKNLIFLDEPHFAFFHFKTWDEL"
     gene            16244..16930
                     /gene="bioC"
                     /locus_tag="RJ336_000503"
     CDS             16244..16930
                     /gene="bioC"
                     /locus_tag="RJ336_000503"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDZ5212971.1"
                     /translation="MNFLKAKDYEKHAKVQDFMGLKLCEILKDLKISHFEKVFEFGCG
                     RGEFSKKLQNFITFDEYLKNDILDFKENSNILIFDMNEISKQDLSKEKFDLIVSNATL
                     QWLDLKRILPSLRDMLNQNGILLLSTFAEQNLKEIKQSTGFGLNYFSLNELEQIFKVY
                     FNEVKITQELIKLSFDNALDVFRHLKLSGVNSLGFYPLNKGFLKEFEEKFQNKLTYHP
                     VFILCKNDIK"
     gene            16981..17730
                     /gene="modA"
                     /locus_tag="RJ336_000504"
     CDS             16981..17730
                     /gene="modA"
                     /locus_tag="RJ336_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDZ5212972.1"
                     /translation="MKKFIVFFGILFFVSCLNAQNLSIFVASSASKAMSEVKDEFLKT
                     HPEDKIELVFGASGKYYELLKQGREFDLFFSADTKYAKAIYDDKNALIKPKVYVLGVL
                     ALYSLDENLLQGGIENLKEKAGKITHLSIANPKVAPYGVAAKEVLENLGLNELLKDKI
                     VLGENISVPVLHVDSKNSDIAIVAYSLVSSINHPKGKAIIIDTKYFSPLEQSYVITKY
                     AKDKKLAFEFSEFIGSSKAKEIFKKYGFSTP"
     gene            17727..18128
                     /locus_tag="RJ336_000505"
     CDS             17727..18128
                     /locus_tag="RJ336_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-pterin-binding protein"
                     /protein_id="HDZ5212973.1"
                     /translation="MNLIKGQICELLNQEDIVIVKILSKEVIFSILMLELKYLENLKI
                     GASVELLFKEHELCFSTSKTLLSVENSFLAKITKIKKGELLYQVFFDFKGNELSSIIT
                     KEKALELEICENQEWLCFVKANDIVLRSHSA"
     gene            18121..18795
                     /gene="modB"
                     /locus_tag="RJ336_000506"
     CDS             18121..18795
                     /gene="modB"
                     /locus_tag="RJ336_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDZ5212974.1"
                     /translation="MLDPAFLQTLYLTFKLAFITTFILFFIGVFLAYLLSFVRFPFKT
                     ILQSFISLPLILPPSVLGFYLLVTFSANSFLGQVLKEYFNLSLVFSFEGLVFASLIFS
                     LPFMVNPLQSAFSSINPNLLDASYSLGKGKIYTLFRVILPNSKAGIFSACAMSFAHTV
                     GEFGVVMMIGGHKQGETLVASIAIYDELEILNYNLAHQYAFILFIFSFLVLFSLYFVN
                     KKMSFQ"
     gene            18792..19676
                     /locus_tag="RJ336_000507"
     CDS             18792..19676
                     /locus_tag="RJ336_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HDZ5212975.1"
                     /translation="MIRIDINHPINTAKGRLDLNFKKDIESGKITALFGESGAGKTTL
                     LKIIAGLIKPKLGRIEVDNELWFDSSKNFSLALQKRKIGFVFQDYALFPNMNVKENIA
                     YATSSKAKVSELLALMGLENLAKIYPKHLSGGQAQRVALARALAREPKILLLDEPLSA
                     LDFKMRANLQDELAKILEYFKISTLLVSHDLAEIYKLSHRILELKNGKIIKDFPKNEF
                     FTHSSISAKLRLSATLLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKAYQDIKIGDT
                     LLLSIKAFNPIIVGKLDK"
     gene            complement(19761..20534)
                     /locus_tag="RJ336_000508"
     CDS             complement(19761..20534)
                     /locus_tag="RJ336_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-61 family class D beta-lactamase OXA-193"
                     /protein_id="HDZ5212976.1"
                     /translation="MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWAS
                     NDFSRAMETFSPASTFKIFNALIALDSGVIKTKKEIFYHYRGEKVFLSSWAQDMNLSS
                     AIKYSNVLAFKEVARRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAIL
                     LFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDEN
                     KYKAFALNLDIDKFEDLYKREKILEKYLDELVKKVKNDG"
     gene            20754..21578
                     /gene="panB"
                     /locus_tag="RJ336_000509"
     CDS             20754..21578
                     /gene="panB"
                     /locus_tag="RJ336_000509"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDZ5212977.1"
                     /translation="MRKSMISFLEKKAKNEKITMVSAYDYHSARILDNSDIDIILVGD
                     SLAMTVLGMQDTLSVTMDEMLIFTKAVSRGAKKSFVLADMPFMSYQSSDRDAILNASR
                     FIKESHANGVKVEGGIEIASKIKLISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQS
                     AQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHD
                     LLGLNKDFKAKFVKHFDKIDPQVGVEKYRDEVKSGIFPSQEHSFDYLDDELLDKLY"
     gene            21589..22437
                     /locus_tag="RJ336_000510"
     CDS             21589..22437
                     /locus_tag="RJ336_000510"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDZ5212978.1"
                     /translation="MQVITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA
                     KTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMYLKNF
                     STYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMV
                     DDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLAISQSIFLAEKLVREGEKN
                     TSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNF
                     LVQGLK"
     gene            22434..22814
                     /locus_tag="RJ336_000511"
     CDS             22434..22814
                     /locus_tag="RJ336_000511"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDZ5212979.1"
                     /translation="MNITLLKSKIHRASVTEARLDYIGSISIDEKLLQASGILEYEKV
                     QVVNVNNGARFETYTIATQEEGVVCLNGAAARLAEVGDKVIIMSYADFNEEEAKTFKP
                     KVVFVDENNTATKITNYEKHGAIF"
     gene            complement(22924..23382)
                     /locus_tag="RJ336_000512"
     CDS             complement(22924..23382)
                     /locus_tag="RJ336_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDZ5212980.1"
                     /translation="MLRKADIKDLNACLSLFEQSVKTLCAKDYTKDQICAWIKIDRQQ
                     WEEKFKYDEIFVYEKRGKIASFISVKQEQKLLDLLFTHPDFVRQGLAQNLLDFILKTY
                     LHNEIYTFASLSAKDFFLKNGFELIRENKVIKEGQNLKKFLMKKDVVYKN"
     gene            complement(23366..24025)
                     /locus_tag="RJ336_000513"
     CDS             complement(23366..24025)
                     /locus_tag="RJ336_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDZ5212981.1"
                     /translation="MMNDRFTRIKWLVGEEKFQKISQTKVLVCGLGGVGGICVDALYR
                     SGFKNLTLIDADKFEITNQNRQIHSENIGEEKAKVFERIYKVKGIVSKIDENFLKNFD
                     LSEFDLIIDAIDDIPAKVALAHLIDFKKQIFISSTGGARKLDPTRIKTTSIFKTHGDA
                     LAKKFRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLALRKVLAKK
                     S"
     gene            complement(24015..24791)
                     /gene="surE"
                     /locus_tag="RJ336_000514"
     CDS             complement(24015..24791)
                     /gene="surE"
                     /locus_tag="RJ336_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDZ5212982.1"
                     /translation="MKEILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSAC
                     SHSITLTKPLRFVKVGKRFYKLDDGTPADCVYLALHALYKKRLPDLVISGINKGANVG
                     EDITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDYKNALQITKKIIQNIFDKGFP
                     LEKKEFLNINFPAKSKIKGIKICKAGKRVYNFEAHSNVNPRGVEYYWLAAANLDFEDE
                     KNSDIALLKKGYATITPIMLDLTAYEKMKKVKKWLKANDE"
BASE COUNT         8357 a         4149 c         3485 g         8857 t
ORIGIN      
        1 tttttattat ttaatgataa aattttaaaa ctttcgtcaa caaactattg acatcttttt
       61 ctagattttt ttccacctca cttgtttttc catgttcaat aaatttgtct tcatattcaa
      121 agctaacaac ttttacatgc aaatcatatt tttgtaaaaa attattaatt aaactttcta
      181 taccgccaat tttaacattt tcactaaaaa taaaccaaat tttacttttt ttagcaagct
      241 cacacaaaag ctcttcatct aaaggtttag caaaaattaa atcaatcaaa ttagcattat
      301 tattcatttc ttgcaaggct cttaagactt gccacgcttt tgccacacct tgtccataac
      361 ctaaaaaagc aatttcacta ttatttttta caagccattg tgccttacca agttttatct
      421 cacaaggatt aaattcttta tccaaaataa aactccctct aggataacga aaagcaatag
      481 gtccttgatg taaataagca tactccatta tattttgcat catttgttca tctcttgggg
      541 ctaaaagagt gaaatttggc aaaggagcta aaaaactaag atcaaaaaca ccttgatgcg
      601 tctccccatc ttcgcctact atccctgctc tatccatagc aaaaaccaca tttaaattca
      661 taatcgcaca atcatggatc acttgatcat aagcacgctg caaaaaggtg ctatatattg
      721 caataaaagg tttaaatcct tcttttgcca tagcggccat agaagttact gcatgctgtt
      781 ctgcaatagc cacatcccaa aaacgatttg gatatttttc tataagctta tcaagacctg
      841 ttccacttgg catagccgct gtaaccccaa caatattttc atattttgag gctaaatcaa
      901 gcaaattctt agaaaaaatt tcagtagcag attttttagc atcacttttt ttaacactct
      961 ctccactatc tatatcaaaa gctcccaccc cgtgccattt agcatgtttt ccttcagcta
     1021 aagcatagcc tttacctttt atggtttgag catgtatcac acaaggcttt tgcatagctt
     1081 ttgcttgttt taatgcagaa ataatttcac ctaaattatg tccatcaata ggccctatat
     1141 attcaagccc taattcttca aacaaaagcc caggagtaat aagtttaaaa ctctcttcaa
     1201 aacgcttggc catataagta gcactatcag gcaatatatc caacatttta gcaatacgct
     1261 ttttaaaact ttgataaaac tgcgttgcca tagcctgaga aagatacttt gaaattgctc
     1321 caattggttt tgaaatactc atttcattat catttaaaag tattacgcaa gcaaatttag
     1381 aatcacccaa ttcatttaaa gcctcatagg ccatacccgc acttaaagca ccatctccaa
     1441 tcaaagcaac aggaatacgc ttttcacctt ttaaagcaat ggccttacaa gcacctactg
     1501 ccaaagaaat agaggtgcta gaatgccctg ctacaaaata atctccctcg ctaggttttg
     1561 tataaccact taaaccattg atttgtctta aagtatcaaa tatttcttct tttccgctta
     1621 aaagcttgtg tgtataagac tgatgcgaca catcaaaaat aaaaggatct ttttttgcat
     1681 caaaaaccaa atgcattgct atactaagtt ctacagcacc caaatttgaa cttaaatgcc
     1741 caccattttt actcacaact tgtatgattt tttcacgcat agatgctgct aaattttcta
     1801 attcttttaa acttagcttt tctaactctt cttgagtatg ggcaaatttt ttactcatta
     1861 ttcaccattt ttttaatttt agttagacga gagttaagat tggattctat attgcctgcg
     1921 tcacttataa taacaacact tcctttgcta attgcatcat caagacttat tttaatatga
     1981 gcattctgat caaattgctc ttttaaatac tcataatcct ctgcattaac cttaagctca
     2041 attgcactag cacccttaag ctcgccgatt aaatctttgg ccaaagcata agctatctta
     2101 cttgaattta gttcaagctc ttttaagatt acttctttag cgatatctat agcagtatct
     2161 gctaattctt tctcattttt ttctatgaaa ttttcaagat tttcgcaagc attatcgagt
     2221 ttggctatac tttttaaata cttatcttta aaatcactca attccttttg aaattcttct
     2281 tttgctttct cataaccttc tttggcaaat ttttctttag cattttcaag ttctgaattt
     2341 aagcggttat taaattcatt ctcttggctt tctatttgca tttgaagttt aataatattg
     2401 cttgacattt catctgtttt tttaagcaaa tcttcaacaa aacttggttg aaatgttgga
     2461 atttgagttt ccataacagc ttgcgtaggg gcaatagctt gattttcttc aactgctttt
     2521 tcgtcattta aagatatatt agcattttct tcatctggag tttgagtatg ttttttttca
     2581 cctgtatgat tatcaaattc tgaaataact ttaaaacgat atccttcaac aacatgctga
     2641 tcagaagccc caccagaaat tacattgcta cgattaacca tctctcacct actctatcat
     2701 ttcatccgca tcgcctgttt gaacaagacc ttgttctgca agtttttgca ccacttcaac
     2761 aacctttctt tgtgcatctt caacatcttt aacacgcaca gcacccaaaa aacccatttc
     2821 ttcaagaaaa gcttcgcttg cacgcgtaga catattggct aagaattttt gctttaactc
     2881 ttcacttgca ccttttaaac ctatcattaa atcacgctta tcagctactt ttaaaatttc
     2941 tcttatagct tgagtgctaa gtttttgtat atcatcgaaa gtaaacataa gctctttaat
     3001 agtctctgct aagcgttcat cactttgttc aatataagta atggttgatt tgcttgcttt
     3061 ttgacccaaa cgattaagca cttctgctac cgctcttggg ccgcccactt caaccttata
     3121 agaggtaaga ctttcaagct tgctttctag cactgcagaa actcttttaa taatacttgg
     3181 agaaatatcg ccaagatttg ccattcttat aaccacctca gcccttaatt catcactaaa
     3241 atactctaaa gtttctgccg catgaataga atccatgtgt gccaaaataa gagcgatggt
     3301 ttgtgggtgc tctttggtaa taaagtctgc aagttgctgt ggtttaattt gcgccaaata
     3361 agcaaaattt tgattattct ccatactttt agtgagtttt tcaagaattt tatttgcaat
     3421 ctctggccca aaagtacgaa aaagtatttc tttagcatat tccaaaccac cacttttaat
     3481 atattgattt gattgaagca gagtgtaaaa ttcttctaaa actgcagtag ctacggatct
     3541 atcaacattt ttagccatag caatataacg tgaaatttct gtaattacat caatttccat
     3601 atgtgaaaac acagaagttg ttgcatcttc gccaagttgt ataagaaata tcgctacctt
     3661 ctcaggcatc gataaatcat catagaccat tttttgttct tcacttagct ttatcatcac
     3721 atatcctttt cgccaaattc actatcattt tgaattaagt tttgtaaaag tgctgcaatt
     3781 tcctcgcctt tatcacttac taaaccacgc aatttttcaa gtaaaacctc atattgaata
     3841 gaatcttcat taaaattatc cccaaaacca agttgttctt caactttttt ccttgctgca
     3901 ttaaatttct ccaaagcatc ttcagcatca tctaaaacag catttggacc ttgctgcatt
     3961 tcttcttgcg ctgcgacatc ttcaagcatt ttttgagtaa atggagcaat gacttttttg
     4021 taaaaaataa aaagtaaaat cgctgcaata aaatacttaa ctggtggaat aaatggctca
     4081 acaaaacgat tgtaaaaagt tttaacttta ctctcaactc taatcgactc acgatgaaat
     4141 ggtaaatttt gcactacaac actatcgcct ctagtagcgc taaaattaat agtattttta
     4201 actatactct caacacttgc aagctcttct ttagtcaatg gaacatattc gcttttcaca
     4261 tccccatttt catcaaccac atcttgatat tttccatcta tagtgacagc tgctgaagtg
     4321 cgtaaaactg ttgcaaattg ttttttggta tttgtaatag ttttagaaag ttcattattt
     4381 gtagtaactt gatttttttt ataagtgtca atttgacctt tattgtcaag tccttcaaca
     4441 ggacctatat tagaaacagc acctggaaca ccttgaattt ctggatcttt tctacctgtt
     4501 ctttcctcgt ttaaagtttg ctcactacgc actataggat ttggatcata aatttcactt
     4561 tgagattctt gcttggaaaa atcaaaatct atatttacac tcacttttac tttatccata
     4621 ccacctgcaa aaggagctaa attttctata atcttatctt ctaaagcttt ttcttgatca
     4681 cttttaaatt taatttgcgc acgaaccaag tcatcttcat atgcttcttg ctcatctaaa
     4741 ggcacaccac tttgatcact aatcttaaca ttttctttag taagttttgg aactgccgct
     4801 gaaacaatat tttttatacc atcaatttgt tttctagtaa gctttaagcc ttcgcgaaca
     4861 ttaacaacaa ctgaagctgt aggcggaatt tgcctttcag taaaaacact atctttagga
     4921 aatgctatgt gtacaacagc gctacgaata ggttctaaag tctcaatagt tcttgcaagt
     4981 tcgccttcta tggctctttg gtattttacc ctttgctctt catttgtagc tccaaaagct
     5041 tgagtatcaa aagcttcaaa acccacgcga ctatctttta taagaccttc gcttgcaata
     5101 aacattcttt gacgataaac ctgatcttgt ggaactaaaa ttttattttc actttctaat
     5161 ttatagggaa tattattttg ttcaagttta gctacaattg cagcagaaga acttgggctt
     5221 acattttcaa ctaaaactgc atatccatta tttgcattac taccacttcc acgaaataaa
     5281 gctaaaaaaa ccaaaaaccc aaccactact acaatagatg cagcaatcac tatacgctgc
     5341 ttgcgagtta aattttgata aagttgccca atttgatgaa gcatattttt aaaatccatt
     5401 aattctcatc ccttagttta gcgaatttta catattttta tttgatttat ctatcttaaa
     5461 atcttatcaa attctgtaaa aaatttttca ttttcataag atgttcctat agtaatgcgt
     5521 atagcattta aaccatagct ttttaaattt cttattatta tacccttttt aagcaatttt
     5581 tcagacaaat ctgtactatt tttttcatca aaaaaataag tgatgaaatt tgtataacta
     5641 tcaatgattt tgatattatg ttttttggca aattctttat aaagctgcat ttgagaaaaa
     5701 ttattttcta aagttttttt agtaaattca tcatcatcta ttgctgcaac tgctgctttt
     5761 aaagcaagat tgctcacatt aaaaggagca cgaagcttgt aaaatgcatt aataatatta
     5821 gcattagcta taccataacc aatgcgtaag cctcctaatc cataaagttt agaaaaagtt
     5881 cccaaataaa gtacattgtc aaattcttta atcaattcac aaggttctaa atgttttttg
     5941 ctatctttaa aacttgcaaa ttcattataa gctgcatcaa tcacaactaa acaatcctca
     6001 tccacacctt taataaactt ggtcacttca cttgcatcca aacactcgcc taaaggatta
     6061 tttggtaagc acaagaaaat gagtttaatt tcatctttgt gtgcttcata aagcttttta
     6121 aactcattta aatcatgagt aatgctttga gttttataac actttgcacc gcattgtttg
     6181 gcataaattt catacatagc aaaggtaact ccagcttgta aaaaagcatt tttagaattt
     6241 aacttagcat gtatagcaaa ttcaatcact tgatcactac ctgcaccaat gatgatattt
     6301 tcattttgaa ctttgtattt ttgagccaat gtgcttttaa gttctatcat actatcatca
     6361 gggtaaagat gagctttgtt tgcattttgt cttaagcatt ctatagcttt tggtggcgta
     6421 ccaaaaggat tttcattact tgctaatttt atcacttctt taacgccata ttctttggca
     6481 ataacttcta tatcttttcc gggttcataa ttgcttaaat gatttaaaaa ttcattaaat
     6541 ttcatctttt tctcctgata aataagatcc aagccaaaca atctcttgta tatcttttaa
     6601 agcttttttt acattttcat catcaatatg cccttcaaaa tctatgtaaa aactgtgtaa
     6661 aaattctttt gattttacag gacgagattc aagcttagta agattgatat tttctttttt
     6721 aaactgctct aataaaaaac taagcccacc aggtttatgt gctgtgtgtg ctaaaataga
     6781 agttttacaa tttggcattt taggattttt aatatcgctt aaaattaaaa atcttgtttt
     6841 attggctgca ttatcttcta ttttgtcaaa aagcacaggc acattataaa gcttagccgc
     6901 tattttagag caaattgctg ccgcatattt atcttgcgaa gctaggtaag ctgcattagc
     6961 tgtagatttt gaaggaacaa attctatagc actaagttca tgactttcta aaaatttacg
     7021 acattgatta taaccttgcg gatgcgaata aatgcgtttg atttctttta aattttcatt
     7081 aattcctaca aaagaatgat gaatatccat ataaatttcg ccaaaaattt taagctcatt
     7141 atacttacct agacaatcta aagtaatgcc cactgcacct tcggtattat tttctatagg
     7201 tacaacaccg tattttgctt ctttgttgct taactcttta aaaacatctt cgatattggc
     7261 caaggctata taacgactca tcgcaccaaa acgacttctt gctgcttgat gtgtataagt
     7321 tccttcaggc cctaaataag ctatagtttg aggcatttct aaatttcttg aaactgcaaa
     7381 aatttcttga taaattgcct ctatggcatt ttgatctaaa agtcctaaat ttgcattttt
     7441 taaacgattg ataatggctc tttcacgctc gggacgataa atagttcccc cactactttg
     7501 cttaagctca cctatacttt taacataagt cattctttca tttaaaagat ctaaaatttt
     7561 atcatcaacc gcatcgattt tatttctaaa ttcttctaaa tttggcattt tagatccttt
     7621 aaaaactcaa aaacactagg ataaactcca tcaagcaaat ccgtatcaag cccttttgtg
     7681 tcgcttatct tgccgcttaa aactagcaag gttttcatgc caagttcttt tgccttaagc
     7741 aagtcacccc taaaatcatc actaatgatt ttaatatctt caaaatcgat ttttgaattt
     7801 tgtcttctta ttaaatttaa agcttcttta taaaaagcaa tgctaggctt acccacaacc
     7861 tcgtattcaa aatcaatagc atttttaagc atagccataa tgctacctac accaggataa
     7921 ggcctaccat cttttttata aatactagtt tcgtgcatag ctataaatct aacttctctt
     7981 ctagccaatt ctatcatagt ggcaaaatct ttaaatttaa aatcatcata actagccaca
     8041 agcacagcac taggatttac aaaatcgagc tcaaaaccaa gattttcaag actttttaca
     8101 aactcatctg caccaaaagc cgcaacttta caaggtctta aaaggtgttt taaaacgctg
     8161 aaaggatcaa tataagcatt ttcttttata accaatcctt tttgctgtaa tttttctaaa
     8221 aaatcaagtt tttttgtatt gttagtgatg ataagataag gaagattttt tgcatttaaa
     8281 aaatcgatca gttctttagc accatggatt aaagatttat catgatcaga aattaaagtc
     8341 ccttgaacat ctaaaaaaaa cattttaagc ctttaaaaat ttctcttcta aagcgatttg
     8401 atcttcaaaa ttttctcttt gacggatcaa tcttacctgt ccttcttcaa gggctaattc
     8461 gcaaacttta ttacgagtat tgtaattact actcatgcta aaaccataag ctccagtatt
     8521 tttaataacc attatatcat cactttgagt gctaggcaaa gaccttgctt tagcaaaaaa
     8581 gtccccactc tcacaaattc cacctacaac atcacataaa ctctcttcgc cttgattata
     8641 aggtaagatt atttcatgat aagcctcgta taaacttggg cgtataagat cattcatcgc
     8701 tccatctact acaacaaaac gcttggtttt attttgtttt tcataaagta ctgaacaaac
     8761 aaattctcca cttttagcaa ctaaatacct tccaggctcc attcctatgg ttaaatcaag
     8821 cccatgaagt tgtgctaata taccttgtgc ataattataa agatcaggtt cgcactcatc
     8881 tttttcataa gccacaccca agccaccgcc tatatcaaaa aatttaagat cgatttgcaa
     8941 ggcttttaac tctcttacaa gttttgcaac aatgcctgct gcttcatgaa taggagaaat
     9001 atctaaaagt tgcgaaccta tatgaaaatg cactccaaca ggctctaaaa aagatgaatt
     9061 ttttgcataa agatacattt ttcttgctat atcaatttca acaccaaatt tattttcatt
     9121 taatcctgta gaaatataag gatgagtttt tgcatcaaca tttggattaa cacgaatact
     9181 gattcttgcc tttagattaa gttctttagc cacactttct aaaagcatca tttcagcttc
     9241 gctttcaagg ttaatatata aaatatcata ttctaaagct tgtcttaact cttctttggt
     9301 ttttcctact ccactaaaaa taatcttata agcttttgct cctgctttta aggcacgctt
     9361 tacctcgcct atacttacac aatcaaatcc actatctaaa tttgcaagca tttgcaacaa
     9421 acttaaattt gaattggctt ttacagcgta aaaaatttga gattttctag ccttaaaagc
     9481 ctctttgaga tttaaaaaac gctcttttat gaaatcaaaa ttgtaaatat aaaaaggagt
     9541 attaaattct tgctttaatt gtttataatc catatttaac ctttaatttt tataatttta
     9601 ctacacaaag cttaatttat cgatgcttat aatacatata agcacttaaa caacccaaaa
     9661 ttataatagg cactacaatg ccaatttcac ttgcaatcac actattttcg cttaatctag
     9721 taagcaaaaa caagactccc caaatcatca aagtcactac aaaagctata aaagttacaa
     9781 aagcaagatt aaaaaatctt gctattacag gaaaaaaata atacataata agcattaaaa
     9841 atggtgcaaa aaaaggagta aaaacaaatt tataaagatt gattttaaga gcatctgtat
     9901 tgacattttg cgccttaaaa agctcaaaac tttcaagtgc gtcagatatt gaataatcac
     9961 tattactagc aaccccttct ataatctttg gtttaaaacc ctcaagtgat ttaagctcgg
    10021 agaaatcttg tatctttaaa ccatcattag caagttcata atttttaggt aataatgtaa
    10081 tattaccatc tcgcaaaatc caactttcac cttcaaaatg ggcattttta gcacttacaa
    10141 aagagcttaa atttaaatca ttaatattaa aaatttttat attttgagca ctattttgtc
    10201 cattgtttat ctttgaaata taaacaaaat tattgttaaa tttcaaaaac acttctccac
    10261 tttgattcat aatagtgcca ttttttaaaa tatttctctt ataatcattt gcataagcaa
    10321 aagaagtaaa attcattcct atataaatac aacaaaaaaa taaagcccat aaaaaaggaa
    10381 ataaaataac ataatttcta ctcagtccta acgcataaag acttacaaat tcatttgctc
    10441 tgatcataga aatcaaagaa actaccaaag caaaaatcaa agaaatgggt aatacataag
    10501 gcactgccga aaaagataaa aacataacat aaagcaaatc aagatttgcg gcttttggta
    10561 gatctttaaa atttaagagc aaatcaatac cgcaataaaa accaagtaaa gaaaaaaata
    10621 taataaaaaa attttttaaa taaatccctg aaataaaacg aaaaaatatc cacatcttaa
    10681 gcctttaggc tgtatttgga tgatatagca gacaaatcat cattttcaat aagctcaagc
    10741 aaagcttttt ttgcatgctc taaaactttg cttaaagtta tttcttcttc ggatttaaat
    10801 ttacctaaaa catgggaaat cacattttca ccctttccca ctcctatacg cactctttca
    10861 tagtcatttc cacataaagt atctatgctt ttaagcccat tatgtccacc acttgaaccg
    10921 ccttttttaa agcgcaaggc tcctaaattt atatctatat catcatggat aactatcatt
    10981 ctttcgcatt tataaaaatc attcactgct tttacgctaa gtcctgaatt attcatataa
    11041 gtactaggtt taagaagaag taaagaagaa cctattttaa aaagctctcc tttaaattta
    11101 gagtttgtaa gatttgtaaa attgctttct tttaaaagta agtcaattag cataaaaccg
    11161 acattatgac gggtattttc atactctacg cctatattgc caagccctac gactaaaatc
    11221 atctagcttt ttctacacct acaaccgcta ctctatcagc atcaatcata gttactcccg
    11281 caggaactac aatatcacga acaagtaaag catcacccac atcaagttta cttacatcaa
    11341 gttcgaagaa atttggtaaa ttttcagctg cacattttac ttttaatctt ctttttgatt
    11401 gaattaaaac acctttattt ttaagaccta tagctgttcc tgtgatttta actggaacca
    11461 tgtatttaga aatcacacct ttttgcgcaa cttttaaatc cacatgttta agttctgcag
    11521 ttacaggatc tttttgataa tccacaacta caacgcttaa agtttgagaa cctactttta
    11581 catcaaaaat taaagtagtt tttttacgaa cttccttaat aaactcattt actttaaaag
    11641 cggcattgat gttttctaat ccttttccat agatgtttgc aattagataa ccatctcttt
    11701 ttaaagcttt agcagctttt ctaccgatac tctctctaac gataccttct aacatctttt
    11761 atcctttctt aaaaaatgag ctttgattat atctaatttt ggcttatgga aaagtaaatt
    11821 tatagcttct tttaatttct ttaagatata atttgtttta caaatattat gttaatttaa
    11881 ggcttcatgt gaatgaaaaa ttcaatatca atatagcttg gtttttaata atcttaggcg
    11941 ggattataga atgtttttgg gtcagtggac ttaagtattc tacagaaatt tggcactata
    12001 ttttaacagc cattggggtt tgtatttctt ttacttgctt tttaaaagct tgtgaaagac
    12061 ttgaagtaag tattacttat agtgtttttg taggcattgg cactattggg gtggttttaa
    12121 atgaaatgtt tatttttaac gaggctgttt ctataattaa acttgtgctt atagtgattt
    12181 tacttttaag cattatagcc cttaaatgga taagcaagga agcttaaata tggaatggtt
    12241 ttatttgttt ttagctactg cttgtgaaat ttttggcgtg gtgatcatga aagaacttgt
    12301 aagcactaaa aataagcttt accttttggc tttgatagtg tgttttggat tttcttttac
    12361 ttttttaagt ttaagtatgc aaaatatcgc tatgagtgtt gcttatgcta tatggacagg
    12421 agctggaact gctggtgggg taatgatagg agtacttttt tataaagaaa gtaaaagttt
    12481 tttaaaactt tttttaatca ctgtgattat tgcttgtaca gtaggtttaa aatttctttc
    12541 ttaaggattt tttgtgcaaa tttatgtgag tggaatacat actgatgtag gaaaaacaca
    12601 ttttagtgca gctttttgtg cgaattttaa ctatgattat tttaaactca ttcaagcagg
    12661 aactccaaca gatagtgagt ttattgcaaa atttagccca aaaacaaaga tttttaaaga
    12721 aggtattttt ttgcaaactc cagcttctcc tcatcttgga aaaatcaaag aaaagcttga
    12781 ttataaagcc ttagatatca ttttaccaaa aagcaaaaac ctacttattg agcttgcggg
    12841 tgggcttttt tctcctatgg atgaaaatta cactatgatt gattttgtga atattttcaa
    12901 acaccctacg attttggtag caaaatacta tcttggaagc attaatcata tcttgcttag
    12961 cattgaagct ttaaagcaaa gaaatatcaa tcttttagcc cttgtaatga tgggtaaaaa
    13021 agatatctta caagatgatt ttataaaaaa ttatgcaaaa attcctataa tcaatcttga
    13081 tttttttgat gaaaatagca ttttaaataa agattttaaa gagcaaatgc aagaaatttt
    13141 acaacttaaa attccttaaa aatctgctct aaactctcta gtacataaac gatttgttct
    13201 tttgtgatga tgtaaggagg cataaaataa atcgtatttg ctaaaggtct taaaagcaaa
    13261 cctttttcta aggctttttg aaatacaaaa agtcctacgc gtttatactt ggtgcttaaa
    13321 atatcaaaag cactgatcat cccgcaagtt ctaaaattac ccaaaaagtc aaatttttca
    13381 agtcttgaaa attctttttt gataaactcg cttaaaattt gattttttac taaaatattt
    13441 tcatcctcaa agatatctaa aaccgcattt gctgccgcgc aagctaaggt atttcccgta
    13501 tagctatgag aatgtaaaaa agccttttgg ctttcataag tatcataaaa agcattataa
    13561 atttcatctc ttgtaagcac tacagaaagt ggcataaatc cacccgttat cccttttgaa
    13621 aggcagataa aatcggggct ttgtttgcat tgatgtaagg caaacaaagt tcctgtgcgt
    13681 ccaaagccca ctgcaatttc atcaaaaatc acttgcactc caaatttatg gcaaagcttt
    13741 atggcctcat caataaacct tgcttcatac atatgcatat ttcctgcaca ttgtaccaag
    13801 ggttcaagta taaaagcaca aatttcactt gcattttttt ctaaaatatc ttttaaaatt
    13861 tcaagctctt tagtgtagtc tttgccttgt ggcacaggcg tgcttaaaca ctctaaaagc
    13921 aaggctttgt aagtatcttt ataaagcgct acatcgccca cacttaaggc tcctaaggtt
    13981 tcaccatgat aagaattgct taaagataaa aatttacttt ttttcactcc cttatttaaa
    14041 tgataatgaa aactcatttt aagtgctact tcaatagcac ttgatccatt atctgcataa
    14101 aaacatttgt taaaattcct gcctactttt tcgcaaagtc ttgcagaaag cttgataatg
    14161 ggctcatgtg taaagcctgc taagatcaca tgctctagct catcaacttg ttttttaatg
    14221 gcatttgcga ttttttcatt acaatgacca aaaagattga cccaccaaga actcacacaa
    14281 tccatataag ctttatcatc aaaatcataa agccatacac cttttgcttt ttttatagga
    14341 attaaaggta gggtttcgtg atctttcatt tgtgtgcaag ggtgccaaat gtgttttaaa
    14401 tcgagatttt ttaagatttg attttgcatt ataacttctt ttttaaaaat attttggcaa
    14461 aataatactt taaattttta aatttacagg aaaaaaatga agcttgaaaa aattttgcaa
    14521 gatctagagc aaaatcacaa tctaagaact ctaacacctt taaaacatga aaataaattt
    14581 gtttataagc aagatcacaa acttttaaat ttagtaggaa atgattatct ttatttggcg
    14641 tcttccaaag agttaaaagc tgagttttta aacaccctaa aagaacaaga tttgtttttt
    14701 tcaagttcga gttcaagaag tttgagtgga aattttgaaa tttatgaaaa attagaaagt
    14761 tttttaaaga ctaaatttaa agataaggaa attttacatt ttaatagtgg ctatcattta
    14821 aatatctctt gtatagcagc actttctagc gtttctaaga cgctttttct aaccgataaa
    14881 tttattcatg caagtatgat tgatggctta agacttggca gggctgattt ttttcgtttt
    14941 catcataaag atatgaatca tttagagagt ttaatccaaa aacattatga aaattatgaa
    15001 aatatcatcg ttttaagcga agctttgttt agtatggatg gagattttag cgattttaaa
    15061 actctgtgtg agcttaaaag gcgttatgat aaaattaagc tttatataga tgaagcacac
    15121 agcgtgggtt gttttgatga agagggtttg gggcttgtta aaaaactagc cttagaaaat
    15181 gaagtggatt ttttggtttt tacctttgga aaagcccttg cttccatggg tgcttgtata
    15241 atatgtgatg aaaaatataa gaaatttttc atcaacaagg ctagagcttt tatttattct
    15301 acagccttgc cacctattaa tgtagcttgg acgcaattta tttttaaaaa aatgccttat
    15361 tttaagaaag aaagagaaaa attagagctt ttaagcactt tttttaaaag taaattgcaa
    15421 gaaaaaaatc acatcgtttt aggcgatgct tatattattt gcttgctttt aggtgaaaat
    15481 aaaaaagcct tagaaatttc acaaaaactt caaaaagctg gtttttttgc tcctgcgatc
    15541 aaagaaccta ccgtgccaaa aaatacagcc agaattcgtt tttctttgca cgcaggactt
    15601 aatacagaag aacttgaaag gataatagag cttttatgaa atatgaattt ttatgcaaaa
    15661 atcctgattc aaaaaaactt atagtggtat ttggagggtt tgcttcacat cctagtcatt
    15721 tttcgcattt aaaaagcgat aaaaatgtga ttttatttta tgattatgaa aattttgatt
    15781 taaattttga tttcaaagct tttgatgagc tttttttaat cgctttttct atgggagttt
    15841 gcgtagcaaa tagactttta aaagagctta attttaaaca aaaaatagcc ataaatggca
    15901 caaatttagg catagataaa tcaaaaggaa ttcatcctac aatttttaaa aaaaccctgc
    15961 aaaattttaa attagaacat tttaaagaga ctttatttaa agaacgcaaa agcttagcca
    16021 aagattttat ttttaaagat gaaaaagctt tgaaaataga gcttgaaaaa ctttttgact
    16081 ttgctttaac aaaacaagaa gaaaatttgc tttgggataa ggtttattca agtaaagaag
    16141 atgaaatttt tccgccaaat gccttgaaaa atagttttaa aaatttgatt tttttagatg
    16201 aaccgcattt tgcttttttt cattttaaaa cttgggatga gctttgaatt ttttaaaagc
    16261 aaaagattat gaaaaacatg caaaagtgca agatttcatg ggtttaaaac tttgtgaaat
    16321 tttaaaagat ttaaaaattt cacattttga aaaagtgttt gaatttggtt gtggtagggg
    16381 tgaatttagt aaaaaacttc aaaatttcat tacctttgat gagtatttaa aaaacgatat
    16441 tttagatttt aaagaaaatt ctaatatttt aatttttgat atgaacgaaa tttcaaaaca
    16501 ggatttaagt aaagagaaat ttgatcttat tgtttcaaat gcaactttgc aatggcttga
    16561 tttaaaacgc attttaccaa gtcttaggga tatgctaaat caaaatggaa ttttacttct
    16621 ttctactttt gcagaacaaa atttaaaaga aatcaaacaa agcacaggtt ttggtttaaa
    16681 ttattttagt ttaaatgaat tagagcaaat ttttaaagtc tattttaatg aagtaaaaat
    16741 tactcaagaa ctcataaaat taagctttga taatgcttta gatgttttta gacatttaaa
    16801 attaagcggg gtaaattctt taggttttta tcctttaaat aaaggttttt taaaagaatt
    16861 tgaagaaaaa tttcaaaaca aactcactta tcatcctgta tttattttat gcaaaaatga
    16921 tataaaatga attttttgtg ttataatcca aaaattaaat ttttacacaa ggaaaactaa
    16981 atgaaaaagt ttatagtatt ttttgggatt ttgttttttg tttcgtgttt aaatgcacaa
    17041 aatttaagca tttttgtagc ttcttcagct tcaaaggcga tgagtgaagt taaagatgag
    17101 tttttgaaaa cacatccaga agataaaata gaattggttt ttggtgcttc tggaaaatat
    17161 tatgagcttt taaaacaagg aagagaattt gatctctttt tttcagcgga tactaaatat
    17221 gctaaggcta tttatgatga taaaaatgct ttaataaagc caaaagttta tgttttagga
    17281 gttttggctt tgtatagttt ggatgaaaat ttactccaag gaggcattga aaatttaaaa
    17341 gaaaaggcag gtaaaatcac gcatctaagc atagccaatc ctaaagtagc tccttatgga
    17401 gtagcagcta aagaagtgct tgaaaatttg ggtttaaatg agcttcttaa ggataaaatc
    17461 gttttaggcg aaaatatctc agtgcctgtt ttacatgtag atagcaaaaa ttcagatata
    17521 gctatagtgg cttattcttt agtttcttct atcaatcatc ctaagggtaa ggctattata
    17581 attgatacaa agtattttag ccctttagag caaagttatg ttatcacaaa atacgctaag
    17641 gataaaaaat tagcctttga atttagcgaa tttattggct cttcaaaagc aaaagaaatt
    17701 tttaaaaaat acggatttag cacaccatga accttataaa aggacaaatt tgcgagcttt
    17761 taaatcaaga ggatatagtt attgttaaaa tactttccaa agaagtgatt tttagtattt
    17821 taatgcttga attaaaatac ttagaaaatt taaaaattgg tgcgagtgta gaacttcttt
    17881 ttaaagagca tgagctttgc tttagtacaa gtaaaactct tttaagtgtt gaaaattctt
    17941 ttttagctaa aattacaaaa attaaaaaag gcgaactttt gtatcaggta ttttttgatt
    18001 ttaaaggtaa cgaactttct agtattatca ccaaagaaaa agctttagaa cttgaaattt
    18061 gtgaaaatca agaatggctt tgttttgtaa aagcaaatga tattgtatta aggagtcata
    18121 gtgcttgatc cagctttttt acaaactctt tatcttactt ttaaacttgc ttttatcacg
    18181 acttttattc ttttttttat tggtgtattt ttagcttatt tgttaagttt tgtgcgtttt
    18241 ccttttaaaa caatccttca aagctttatt tctttgcctt tgattttacc tcctagcgtt
    18301 ttgggatttt atttgcttgt aactttttcg gctaatagtt ttttagggca agttttaaaa
    18361 gaatatttta atctttcttt ggtttttagt tttgaaggtc ttgtttttgc ttctttgatt
    18421 ttttctttgc cttttatggt aaatcctttg caaagtgcct tttcatcgat caatccaaat
    18481 ttgctcgatg cttcttatag tttaggtaaa ggtaaaattt atactctttt tagagtgatt
    18541 ttacctaatt ctaaagcagg aatttttagt gcttgtgcga tgagttttgc tcatactgtg
    18601 ggtgaatttg gagtcgtgat gatgatagga ggacataaac aaggtgaaac tttagtagct
    18661 agtatagcta tttacgatga acttgaaatc ttaaactata acttagccca tcaatatgct
    18721 tttatattgt ttattttttc ttttttagtg ctttttagtc tttattttgt caataaaaaa
    18781 atgagttttc aatgataaga attgatatca atcatcctat aaatactgct aaaggaagac
    18841 tggatttaaa ttttaaaaaa gatatagaat caggaaaaat tactgcactt tttggcgaaa
    18901 gtggagcagg aaaaaccact cttttaaaaa tcatagcagg acttataaag cctaaattgg
    18961 ggcgtataga agtagataat gaactttggt ttgattcttc aaaaaatttt agcttagctt
    19021 tacaaaaaag aaaaattggt tttgtttttc aagattatgc gctttttcca aatatgaatg
    19081 taaaagaaaa tattgcctat gccactagtt ctaaggcaaa ggttagcgag cttttagcct
    19141 taatgggact tgaaaatttg gctaaaattt atcctaaaca tttaagcgga ggacaagcac
    19201 aaagggtagc cctagcaaga gctttagcaa gggaaccaaa aattttgctt ttagatgagc
    19261 ctttaagcgc tttggatttt aaaatgcgcg ccaatttaca agatgaattg gctaaaattt
    19321 tagagtattt taagataagt actttattag tcagtcatga tttggctgaa atttataagt
    19381 taagtcatag aattttagag cttaaaaatg gaaaaatcat taaggatttt cctaaaaatg
    19441 aattttttac tcattcaagt attagtgcaa aattgcgttt gagtgcaact ttgctagaaa
    19501 ttaaaaaaag tgatatttta gtggttttaa ccttgctttt aaatcaagat attattaaaa
    19561 tcactcttag tgaagaggaa tttctaaaag cttatcaaga tataaaaatc ggcgatacgc
    19621 ttttgctatc cataaaagcc tttaacccta tcatcgtagg aaaacttgat aaataagagc
    19681 aaaaatttaa ttttttaatg agtactttaa gtgtacgcaa atcatacaat taagtatttt
    19741 tgcattttac gaaatactca ctagccatca tttttaactt tttttacaag ttcatctaaa
    19801 tatttttcta aaattttttc tcttttatat aaatcttcaa atttatcaat atctaaattt
    19861 agcgcgaaag ccttatattt attttcatct tttaaataca caaaacctac aatccaagca
    19921 attttttgct catcattaaa acctgttttt ccaaaaagct ctaaattttc catatttttt
    19981 aaataaatca tttccttaac actattcatt gcttcttgag aaaaaggtaa gctattttgt
    20041 gaaagtctaa aaagcaaaat tgcttgttct ttagcgctta tttttagtga gttgtcaagc
    20101 caaaaagtat cgatcttgga aattttagca ttaccataat gaagcttgtt taaatattct
    20161 tgcatagttt tgataccaat tcttcttgcc acttctttaa aagcaagaac attagaatat
    20221 tttatagctg aacttaaatt catatcttgc gcccaagaag ataaaaatac tttttcacct
    20281 ctatagtgat aaaaaatttc ttttttagtt tttatcacac cactatcaag tgcaattaga
    20341 gcattaaaaa ttttaaaagt ggaagcggga gagaaagtct ccatagccct tgaaaaatcg
    20401 ttactcgccc aagtttttcc atcataaaaa acaaaagtgc cgcttgtatt atactcttta
    20461 aaccaattat ttaatatctt atcttgccca aacactaaat ttaagaaaag taaaaataaa
    20521 gttatttttt tcataaaata tctttctatt taaataattt taaacaaaat actttttaaa
    20581 gctttatttt ctttaaatat cctttaacat gaactgaaat tttctaaaat tgtaaccatt
    20641 aaagcaatcc atcgattaaa tataacttac tttatcattc atttactatt tatgaaaaat
    20701 tatatgctag ttttttgctt attattttat agctaaaaat tgaggtatgc aaaatgagaa
    20761 aaagtatgat tagttttttg gaaaaaaagg ccaaaaatga aaaaataacc atggtaagtg
    20821 cgtatgatta tcatagtgca agaattttag acaatagcga tatagatatt atattggttg
    20881 gagattcatt agccatgacg gtacttggta tgcaagatac tttaagtgtt actatggatg
    20941 aaatgttgat ttttaccaaa gctgtttctc gcggagctaa aaagtctttc gtacttgctg
    21001 atatgccttt tatgtcttat caaagttcag atcgtgacgc tatcttaaat gcctcaagat
    21061 ttatcaaaga aagccacgca aatggggtaa aagtggaagg gggtatagaa atcgcaagta
    21121 agattaaatt gatttcccaa tcaggaatac ccgtcgttgc tcacctagga ctaaccccac
    21181 aagctgtaaa tatgctaggt ggctataggg ttcaaggtaa agatttacaa tcagcccaaa
    21241 aaattataga tgatgcaaaa gctgtgcaag atgcgggtgc ttgtatgttg gttttagaat
    21301 gtgtgcctgt aaaactagca caaaaaataa gctctatttt agaaattcca acaatcggca
    21361 taggttcagg caaatactgc gatggacaag ttttagttta tcacgatctt ttgggtttaa
    21421 ataaagattt taaagcaaaa tttgtaaagc attttgataa aattgatcct caagtaggag
    21481 ttgaaaaata tagagatgaa gttaaaagcg gtatttttcc ttcccaagag cacagctttg
    21541 attatttaga tgatgaatta ttagataaat tatactaagg atacaaatat gcaagtcatt
    21601 acttctgtca aagaagcaaa acaaattgta aaagattgga aatcacatca acttagtata
    21661 ggctatgttc caaccatggg ttttttacac gatggacatt taagtttagt caaacatgcc
    21721 aaaacacaag ataaggttat agtaagtatc tttgtaaatc ctatgcaatt tgggcctaat
    21781 gaagattttt ctagttatcc aagagattta gaacgcgaca ttaaaatgtg tcaagataat
    21841 ggcgttgata tggtttttat ccccgatgca actcaaatgt atcttaagaa ttttagcacc
    21901 tatgtagata tgaatacgat cactgataaa ctttgcgggg ctaaaagacc ggggcatttt
    21961 agaggcgttt gcacggtttt aactaaattt tttaatatcc taaaccctga tatagtctat
    22021 atggggcaaa aagacgcgca gcaatgcgta gtcgttaggc atatggttga tgatttaaat
    22081 tttgatttaa aaattcaaat ttgtcctatc attagagaag aagatggctt agccaaaagc
    22141 tctagaaatg tatatcttag caaagaagaa agaaaagcgt cactagctat atctcaaagc
    22201 atttttttgg ctgaaaaatt agtccgagag ggagaaaaaa atacttctaa gatcatccaa
    22261 gctatgaaag atattttaga aaaagaaaaa ctaatcaaaa tcgattatat agaattagtc
    22321 gattttaaca ccatggaaaa tatcgaaaat atcactgata atgttttagg agcggtggct
    22381 gcttttgttg gaaaaacaag actcattgat aattttttag tacaaggatt aaaatgaata
    22441 tcactttact caaatcaaaa atacatcgcg caagcgtaac agaagctagg cttgattata
    22501 taggaagtat aagtatagat gaaaaattat tgcaagcgag tggaatttta gaatacgaaa
    22561 aagtccaagt agtcaatgtc aataatggcg ctagatttga aacctatacc atagccacgc
    22621 aagaagaagg agttgtatgc ttaaatggtg ctgcggctcg tcttgcagaa gtgggagata
    22681 aggtgatcat catgtcttat gctgatttta atgaagaaga agcaaaaaca tttaaaccaa
    22741 aagttgtttt tgtggatgaa aataacactg ctacaaaaat aacaaattat gaaaaacacg
    22801 gagctatttt ctaacatcta gctatttttg taattttttc tatcttagat aaattcattt
    22861 atctaagata gaaaaaaatg atttttatat cttttaatcc attatttttg cttatcttaa
    22921 cttctagttt ttataaacca catctttttt cattaaaaat ttttttaaat tttgtccctc
    22981 tttgataacc ttgttttccc ttataagttc aaaaccattt tttaaaaaaa aatctttagc
    23041 acttaaggat gcgaaagtgt aaatttcatt atgcaaataa gtttttaaaa taaaatcaag
    23101 taaattttgt gctaaacctt gtctaacaaa atcaggatga gtaaaaagca aatcaagcaa
    23161 tttctgctct tgtttaacac ttataaaact tgcgattttt cctctttttt catagacaaa
    23221 gatctcatca tatttaaatt tttcttccca ttgttgtcta tcaattttaa tccaagcaca
    23281 aatttgatct tttgtataat ccttagcaca aagtgttttt acgctttgct caaaaagcga
    23341 caaacaagca tttaaatctt taatatcagc ttttcttagc aagaactttt cttaatgcca
    23401 agctggctag ggctaaacca aaagatgcag tcacacccat aaaagatcca agatctttac
    23461 aatgcgcttc ctcatctgaa aataccacat caaaatttcc cttaaagcct gattttctaa
    23521 gctcataacg aaattttttc gctaaagcat cgccgtgagt tttaaaaata cttgtagttt
    23581 taatgcgtgt tggatcaagc tttctagctc cacctgttga ggagataaaa atttgttttt
    23641 taaaatctat aagatgagcc aaagctactt ttgcaggaat atcatcaatg gcatctatga
    23701 taagatcaaa ctcgcttaaa tcaaaatttt ttaaaaaatt ttcatcgatt ttactgacta
    23761 tacctttaac cttataaatt ctttcaaata ctttagcctt ttcttcgcct atattttcgc
    23821 tatgaatttg gcgattttga ttagtgattt caaatttatc cgcatcgatt aaagtaaggt
    23881 ttttaaaacc actacgataa agcgcatcaa cgcaaattcc acccactcca ccaagtccgc
    23941 aaaccaaaac ttttgtttgt gaaatttttt gaaatttttc ttctccaact agccatttta
    24001 tacgtgtaaa tctatcattc atcatttgcc tttaaccatt ttttaacttt tttcattttt
    24061 tcataagctg taagatccag cattataggt gttattgtag cgtagccttt tttaagtaag
    24121 gcaatatcgc tatttttctc atcttcaaag tctaaattcg ccgctgcaag ccaatagtac
    24181 tctactcctc tcggattgac atttgaatgg gcttcaaaat tataaaccct tttgcctgct
    24241 ttacaaattt taatgccttt gatttttgat tttgcaggaa aattgatatt taaaaattct
    24301 tttttttcca aaggaaaacc tttatcaaaa atattttgaa tgattttttt ggtaatttgt
    24361 aaagcatttt tatagtctag ttctttttcg ctttttttat aaaattgaga aagagcgata
    24421 gcaggaattc cttgtaaaac cgcctccata gctcctgcgc aagttcctga gtaggtaata
    24481 tcctcgccta cattagcacc tttattaatc ccacttatta caagatcagg caaacgcttt
    24541 ttgtataaag catgcaaagc aagataaaca caatctgctg gagtgccatc atcaagtttg
    24601 taaaatcttt ttcccacttt aacaaaacgc aaaggtttgg ttagggttat agagtgcgaa
    24661 caagctgatt tttcactagc aggagctact atggtgatct tggctttaaa ttcttttgtt
    24721 aacatcttaa tgagtttttt aagtccttcg ctttcataac catcgtcatt agtgataaga
    24781 atttctttca ttgtcttcct tgcaaaagat aaaatttgga ttttagcata tttttttaaa
    24841 gcttcata
//
LOCUS       DAPWGO010000014        24838 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.015, whole genome shotgun sequence.
ACCESSION   DAPWGO010000014 DAPWGO010000000
VERSION     DAPWGO010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24838
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.015"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            27..1028
                     /gene="mltG"
                     /locus_tag="RJ336_000515"
     CDS             27..1028
                     /gene="mltG"
                     /locus_tag="RJ336_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HDZ5212983.1"
                     /translation="MTIPFLSTINKANISTTKNTTIYKIFFFIRNFFLIFILGIFYYL
                     TQPLKSNSVVFIPQGSISQIITYLKQNKYQMSSIDKYILFFLGHPQSGWINIGTKDLN
                     RAEFLHKLTIAKAALQTITLIPGETSVIFLEQAAKQLELDKDMLLKEFQAQAPYDEGV
                     FLPETYKIPKGITENLLIQMLLNHAEISNKKTSEKIFGDYNPKKWHQYIIIASVIQKE
                     AANDNEMPIVASVIYNRLKKGMKLQMDGTLNYGIYSHVKVTPQRIRQDNSSYNTYKFT
                     GLPKEAVCNVSLAAIRAAIFPLKTDYLYFVRDKNTGVHIFSTNIDDHNKAINLQKGK"
     gene            1108..1539
                     /gene="flgB"
                     /locus_tag="RJ336_000516"
     CDS             1108..1539
                     /gene="flgB"
                     /locus_tag="RJ336_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HDZ5212984.1"
                     /translation="MINPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIEF
                     ETALVNRANEIFKKNDNKELQLAVTEEGHQKPWKFPDPSKSTIYLRDGHLARNDANTV
                     DLDVETTEMSKNTVMITALDGVLRRQSNIFSSILDASSKLS"
     gene            1549..2043
                     /gene="flgC"
                     /locus_tag="RJ336_000517"
     CDS             1549..2043
                     /gene="flgC"
                     /locus_tag="RJ336_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HDZ5212985.1"
                     /translation="MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRR
                     REVIFKATDFDKLLNEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKD
                     FRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAID
                     LLRG"
     gene            2050..2346
                     /gene="fliE"
                     /locus_tag="RJ336_000518"
     CDS             2050..2346
                     /gene="fliE"
                     /locus_tag="RJ336_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HDZ5212986.1"
                     /translation="MNNINDLRLNNNISNTNKSQNSTGIGDEFAKMLKNEIDDLNKAQ
                     ESGEAAMTDIATGQVKDLHQAAIAITKAESSMKFMLEVRNKAISAYKEITRTQI"
     gene            2353..4161
                     /locus_tag="RJ336_000519"
     CDS             2353..4161
                     /locus_tag="RJ336_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDZ5212987.1"
                     /translation="MQEYKKNRVSKVAFAYCMALLFMIIFISSTFFLTSKRHIPNTEK
                     DQYALALRGSIITKDNFTITSSKQIYRAEIDLRSINKDKFDLFLKLFQIYSGISNDQV
                     ADIKKRMQNQKKRSYNFVLLQNLDSKQASYLKDLAKKLYIQGFFKAFTNNSGRVETRG
                     LNIIEHEEDRIYMSKDSFTPIIGYTKMILDPESGILKNIGVKGLEKYYDECLSPVQNE
                     KIQGLKDIGGNIILNLNSLQQKKINGCDLYLNLSLKLQKSIEKAIDQRNEDLKANEII
                     VGVMESKTGRILALASSRRYDPQNRGKDLSVLNASAIEYGYEAGSVIKPFIFTTALRL
                     GKIKMDEVINTYGGSYKLGRFTIKDDHKMDKMTMEEVIRYSSNIGMIQIAKRLNNIEI
                     VSGLKIFKFGEKSGIDLPYEQKGEIPNPKRLRDIEKSVLSYGYGLKTTFIQLLAAYNV
                     FNNDGFYITPRLAEKFYQNGRFTNLDDDVKKEKILSSEAAKTMQNVLINVIEKGTGKK
                     AITQGIIAGGKTGTARIAERQGYTSNRYNASFFGFANDLNHAYTIGVLVRHPTKPYSY
                     YAAQSALPMFKDVVDILINEEFLTPIQDNNQTSTNN"
     gene            complement(4158..5927)
                     /locus_tag="RJ336_000520"
     CDS             complement(4158..5927)
                     /locus_tag="RJ336_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi symporter"
                     /protein_id="HDZ5212988.1"
                     /translation="MQEERNSLKYFKFISWSIFTLVLIFILIRYDELANLLAGVAILL
                     IGMTNLGIGFKAFSGGLLEKILAKSTDTKIKSILFGTLSTLIMQSSTLVSIITISFLS
                     AGLISLGAGIGIIFGANLGNTASSWLIVGLTNIKISMLAIPLLIIGVLFFFQKDSVLK
                     GLGNIFIGIGFFFLGVDYIKSGFENFKHIIDLSRFDFAGFKGVFVFLGLGALLTGVIQ
                     SSTATMAIIVAALLAGQISLENSLAATLGTSVGGVVTAVLASLSTNIEGKKLAFANCI
                     FNFGIAFLIVLIFPYFIHFLNFLSIVLNIEDIALKVALFHTLFNLIGVVLFSFFTPQI
                     VLFLNKIVKAPKDKNKDKPLYLDSSLVKFSDTAIKALRKESEHLYNNTYAIVAHAIGF
                     SRKDIQSDKSFKEILENKKWFSKNVDLDYLYQTRIKVLFEAIIDFSTKAQVYINDETK
                     NHKIFTFKMAAKNLAETTKNLKIIQANIKKYSSSSNEFLALEYNKIRSNLGELLRSIE
                     ELRVVEDREKLYLIIKNLQKGKEILKEIDTLTLGNVEHLISVRKITTAEGISILNDTT
                     FAAKIAEELIGAVEVIFSKDISN"
     gene            complement(5931..6365)
                     /locus_tag="RJ336_000521"
     CDS             complement(5931..6365)
                     /locus_tag="RJ336_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5212989.1"
                     /translation="MLGIYLLIAALSFLALYFAVKKLTLNIDEQTLLEPIKMDIYPKF
                     CDLIDEKIREFKENVQNANLALKNSDQKDEFLEKLGDLSRELTFIQTMNLSNKNDSIW
                     QNELFSFLKELENLLLEYLEKGEEEAENLREFLMNEFEKLKG"
     gene            complement(6365..6682)
                     /locus_tag="RJ336_000522"
     CDS             complement(6365..6682)
                     /locus_tag="RJ336_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDZ5212990.1"
                     /translation="MIENIPASLWTKQDLNAYQIFDVRTPLEWEEGILPNAQCVALYD
                     NQGLLNAKFLDEFQSKRDESKKLAFICRSGHRSMVAAEFIAERLGLESINLDGGMLAL
                     KGY"
     gene            complement(6679..8505)
                     /gene="htpG"
                     /locus_tag="RJ336_000523"
     CDS             complement(6679..8505)
                     /gene="htpG"
                     /locus_tag="RJ336_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDZ5212991.1"
                     /translation="MQFQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLS
                     VSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLEN
                     LSGDAKKDSQLIGQFGVGFYSAFMVASKIEVLSKKALDDKAYLWSSDANGYEINDANK
                     EEQGTSITLYLKDDEFANTYKIESIIEKYSNHIQFPIFMEKEEFTPAKEGEEEGKTEL
                     KISQINKANALWRMQKSSLKVEDYERFYEQNFHDSNKPLLYLHTKSEGKLEYNSLFFI
                     PQNAPFDLFRVDYQSGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREI
                     LQENQILKGVKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSL
                     LKLMLYKSTKGENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEV
                     LLMDDEIDSLVTPMLEFEGLKFVAINQVEDKNELSDEEKNTFAPLVAKFKELLKDQVE
                     DVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQNFKPILEINPKHAIFTGLKNN
                     ESFSADIATLVLNMAKLSEGMGVDNPAEFNASLTKIINKAFS"
     gene            complement(8578..8946)
                     /gene="crcB"
                     /locus_tag="RJ336_000524"
     CDS             complement(8578..8946)
                     /gene="crcB"
                     /locus_tag="RJ336_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HDZ5212992.1"
                     /translation="MLNTLLVVGFGGFIGAILRMFSINLVNKFFPYSISLGTLFVNVL
                     GSFIIGLLFSYAQNKGLSPLLKSFISTGFLGAFTTFSTFSYQNLLLLQSGNYLHFALN
                     IILNVFLCLFAAWLGFIIFK"
     gene            complement(8940..9632)
                     /locus_tag="RJ336_000525"
     CDS             complement(8940..9632)
                     /locus_tag="RJ336_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HDZ5212993.1"
                     /translation="MIYKKIKALYFWIFFVLSVALVVFCFCFTKSQNTLWKIRKIWAK
                     FQRYTISYKQEIIGTFNPQAQMILMNHQSALDIIALEELYPKNLCWIAKKELGEIPIF
                     KVAMKKPKLLCIDRKNPRDLVRVLKEAKERISEDRVLAIFPEGTRSKNEKMLKFQSGA
                     KILSEKLNLKVQPILIVDSVKILDTKSFSASSGVLKIICMDLVDTNDDKWLENTRKKM
                     QELLDQERAKLC"
     gene            complement(9613..10809)
                     /locus_tag="RJ336_000526"
     CDS             complement(9613..10809)
                     /locus_tag="RJ336_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDZ5212994.1"
                     /translation="MKILLTLIFSVVVLFGRGEISVFGGQDENMQKELQKLPQEEQKI
                     YQNIPPSDENNDFESNVDDPFVAKGSLVLTNDEYPSRVYVGEVFPITIYARTTENTKF
                     DFNISVEKTNLSFLNPDAKWEFINNEYKTTLWFEAKNSNASLSKISIKLLRNNEAFQE
                     ADINLNPIKFENTLSNKDFSHLVASSLEIKKVKASYFDDANIIMMVELNATNTNLKSF
                     FIEGIQKQGIENLKGDFNASSAFYYAILPLSKTNFEFSYFNKDSKKLENINLKLKISD
                     DEISTQSDLNPVNKDLNIYKQYTLWFLAVLFGALFVWRKNYIILALAVVCFALSFLVD
                     TNTQNAIIKAGSRAKILPTEPSTYFYTANADEKVEVLGKRQNYIKVLFSDGKIGWVNK
                     DDLQKN"
     gene            complement(10806..11453)
                     /gene="purQ"
                     /locus_tag="RJ336_000527"
     CDS             complement(10806..11453)
                     /gene="purQ"
                     /locus_tag="RJ336_000527"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HDZ5212995.1"
                     /translation="MKVAIIRFPGTNCEFDTAYAFEKLGVKTQIVWHEEKEFDTDLVV
                     LPGGFSYGDYLRCAAIAKLAPAMQGVFNHAKKGGYILGICNGFQILLESGLLKGAMKH
                     NNNLSFISKNQNLRVVSNDNAFLKNFKKDEIINLPIAHGEGNYYADEATLKELQDKDL
                     ITLKYEPNPNGSVFDIAGICDENKKIFGLMPHPERACEKVLGNDIGLKMLKGFLF"
     gene            complement(11455..11700)
                     /gene="purS"
                     /locus_tag="RJ336_000528"
     CDS             complement(11455..11700)
                     /gene="purS"
                     /locus_tag="RJ336_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HDZ5212996.1"
                     /translation="MEVIVNISLKNGVLDPQGKAVEKALHSLNFNSVKEVKIAKQIKI
                     SLDEKDEKLAKEQVKKMCEELLVNSIIEDYELVIEKE"
     gene            complement(11709..12419)
                     /locus_tag="RJ336_000529"
     CDS             complement(11709..12419)
                     /locus_tag="RJ336_000529"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDZ5212997.1"
                     /translation="MTKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNES
                     GKGALNCKISTEIFHLLEKNGIKTHLVETISDTEQVVKKCKIVPIEVIVRNVATGSLT
                     KRLGIKDGTVLPFALVEFCLKDDALGDPFINDEHCLILNLVQNEAQISEIKNMARKIN
                     SILTPFFDNKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQ
                     DLGNVKMAYEEVLKRILN"
     gene            complement(12421..13755)
                     /locus_tag="RJ336_000530"
     CDS             complement(12421..13755)
                     /locus_tag="RJ336_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HDZ5212998.1"
                     /translation="MMELILKTKRFFAGLAGFATTFILCLFLTSHLQAKVDQKEEQVQ
                     KRLEALDKLTKTLAIVEQYYVDDQNISDLVDKSLSGLLSNLDAHSSFLNEKDFNDMKI
                     QTNGEFGGLGITVGMKDGALTVVSPIEGTPADKAGIKSGDIILKINDEATLGINLNDA
                     VDKMRGKPKTQITLTIFRKGATKPFDVTLTREIIKIESVYAKMIENENILYLRVTNFD
                     KNVVDVASKELKKYPNVKGVILDLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASE
                     NQEYKADPKNKISNASLVVLVNGGSASASEIVSGALQDLKRGVIVGENTFGKGSVQQI
                     IPINKTEALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFSIKESDLKQHL
                     ESELEKIDKNKKEDKQENKDNKNLISQKQINDDAQLKSAIDTIKILNIKQGQ"
     gene            13873..14163
                     /locus_tag="RJ336_000531"
     CDS             13873..14163
                     /locus_tag="RJ336_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensing transcriptional repressor"
                     /protein_id="HDZ5212999.1"
                     /translation="MCQEKHTHTHSQKHLKAVCNRLSRTIGHLSAIKRMVENDKDCSE
                     ILIQLAAVKAEVNNTAKVVLKEHLAHCMVHAVEENDIQSIEELNKAIDMFMK"
     gene            14275..16848
                     /locus_tag="RJ336_000532"
     CDS             14275..16848
                     /locus_tag="RJ336_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDZ5213000.1"
                     /translation="MANIQNFLTDNMLSNLESAASLAIHSKNNEVAPLHLLWALSVDS
                     TSILNQILNKLNISKEALELEIKSRISKLATSSNVNRENIRFSNELINSLENAKGLMS
                     ANGDSYLSVDTWLVSESQKSPTKEILAQFLDLREFQKELESLRAGRKIDSKTSDETLD
                     SLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVE
                     ALAQRIIKKDVPKSLQNKKVIALDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILF
                     IDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQ
                     PVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAID
                     LIDEAAAELKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEIAKELAN
                     LKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQKAAELEYGKIPS
                     LEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQKFLEVE
                     KHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF
                     LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEV
                     EKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMNLSGKEQEDVV
                     KNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENA
                     ALLIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADELHENDSIIIDAKDDEIIIKK
                     A"
     gene            complement(16876..18807)
                     /locus_tag="RJ336_000533"
     CDS             complement(16876..18807)
                     /locus_tag="RJ336_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HDZ5213001.1"
                     /translation="MKILKYIFSFFTLLFIAGFIYVAYLFTSADTEGYTFKEYKPPLT
                     TQIYDRNGKLVANIFEQHRFYAPYEELPPRLIEALVAIEDTSFFEHNGVNIDAIFRAA
                     VKIIKSGGKTMEGASTLTQQFIKNTELTPERTITRKIREALLAYKMETILTKEQILER
                     YLNFIFFGHGYYGVKTASLGYFHKNLNELSLKEIAMLVGMPKAPSSYDPTKHLDLSIS
                     RANNVISRMYNLGWISKADYDTAIKEIPQVYDDTLTQNAAPYVVDEVIKQLSPNIKDL
                     KTGGYKIILNIDLDVQNMAQNALKFGYDEIVKRDKDANLSTLNGAMVVVNHQSGDVLA
                     LVGGVDYEKSNYNRATQSMRQPGSSFKPFVYQVAINLGYSPMSEIADISRIFEGGAGN
                     NEDWKPKNEGGKFLGLITLKEALTRSRNLATINLALDMGLDVLYSKLMEFGFKDIPPN
                     LSIVLGSFGISPLEYSKFYTMFGNYGTIKDPQIIRQVQDKTGKTIMEFNSNERKVSDE
                     AQSFLVLDMMRNVVEKGTGRNARVKDIEIAGKTGTTNKSVDAWFCGLTPEIEAIIWYG
                     NDNNKPMRYTEGGARTAAPVFREFLTQYIEKFPDTTRKFSIPNGVYRGNYKGESAYYT
                     TKSPLPKANMKFNESEIIF"
     gene            complement(18804..19355)
                     /gene="maf"
                     /locus_tag="RJ336_000534"
     CDS             complement(18804..19355)
                     /gene="maf"
                     /locus_tag="RJ336_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HDZ5213002.1"
                     /translation="MLILASSSISRANLLKTAKIDFRQVSFDYDENLDKNISPFLYVQ
                     KIVLEKERQFLSTLGKDFQNQNLLFADSIVCIDEKILTKAKDKKEAYEMLALQNGKYA
                     SILSAFLLVKPEKRVFSLSKTTLYFKNFDENALRDYVENDLYKGKAGCIMCEGFHQNF
                     ITHQVGNLSTALGLDIQTLKAYL"
     gene            complement(19355..21883)
                     /gene="alaS"
                     /locus_tag="RJ336_000535"
     CDS             complement(19355..21883)
                     /gene="alaS"
                     /locus_tag="RJ336_000535"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDZ5213003.1"
                     /translation="MDIRKAYLDFFASKGHEITPSSPLVPDDATLLFTNAGMVPFKSI
                     FTGEIPRPNPPRKTSCQTCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQA
                     IAYAWEFVTEVLKLPKDRLYVTVHENDDEAFNLWQKHIQKERICKFGDKDNFWQMGDT
                     GPCGPCSEIFYDQGQEHFNSSEDYMGGDGDRFLEIWNLVFMQYERSADGVLSPLPKPS
                     IDTGMGLERVTAIKEGKFSNFDSSLFMPIINEISKLCNKTYIYESGASFRVIADHIRS
                     SVFLLAQGVSFDKEGRGYVLRRILRRALRHGYLLGFKQAFMYKLVDVVCDLMGGHYTY
                     LNEKKDFIKEQIRLEEERFLSTIENGIEIFNEELKNTKEIFSGEVAFKLYDTYGFPLD
                     LTADMLREKNLKVDEEKFELLMNEQKARAKASWKGSGDKTASGDFKNLLEKFGENHFV
                     GYEKAECESKILALLDEDFKEVSTLKDAGWVMLKNTPFYATSGGQSADSGFMAKREVL
                     DTQKFFNLNLSFVKAGEELKVGDIVHARIDTEKREQIARHHSATHLLHHALREILGSH
                     VSQAGSLVESNKLRFDFTHHKALSKEELENIEKRVNEMIINSSEAILENMPLEEAKKS
                     GAIALFNEKYQGNVRVLTLGESKELCGGTHVKNTAQIGSFYIVKESGVSAGVRRIEAV
                     VSKAALEFVKNQLEELSKVKDELKNNDILSGIKKLKNEILSLKNELKNSSKTELDSKN
                     IQGVEICVKRIDNGDIKAMIDDFKNKFAKAVILLIQVKDEKITLAAGVKDVPLKAGAL
                     VKEAAQILGGNGGGRDDFATAGGKDLSKINEALKQSLETIEKAL"
     gene            21998..23071
                     /locus_tag="RJ336_000536"
     CDS             21998..23071
                     /locus_tag="RJ336_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HDZ5213004.1"
                     /translation="MNFINLQAQYLAYKDEINAEIESVLSSSSFIGGIKLNEFEQNLA
                     HFLGVKHAIGCSSGTSALYLALRALDIGKDDEVIVPSFTFIATAEVVALVGAKPVFVD
                     INLSNYNLDFEAVQKAITPKTKAVIAVSMFGQMSDLRALEEILKDKNITLIEDGAQSF
                     GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEISKKIRILLNHGQTQRY
                     KHEFIGINGRLDTLQAAILNVKLKYLEKELDKRQKLAQIYNANLKNCQIPQIDPNAFS
                     AYAQYSVLVEDRASVLQKFEKANIPYAIHYPTPLHKQPCFSEFSNLELKNSEYASEHI
                     LSLPFSPFLSEEEQEQVICIFKD"
     gene            23076..23942
                     /locus_tag="RJ336_000537"
     CDS             23076..23942
                     /locus_tag="RJ336_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDZ5213005.1"
                     /translation="MKIGIIGLGKMGQNHLNELSKNSHFKLNALFDLCKNPNLNIFDD
                     IFYDDLDKFLNQNNDIIIIATPTNSHLTIAKKVFKQCKCVLIEKPLALNLKEIDEISN
                     LAKEYSIKVGVGFCERFNPAVLALKKELENEEIISINIQRFSPYPQRISDVGILQDLA
                     VHDLDLLCFLSKQEITKTNLLKKYTQDQTRESESIILCELEKCIASIHQSWNSTQKLR
                     KIHLITKNHFYEANLNDFSLLKDGNFIELTQQSPLFSEHEALLKLIDNQPNHLASTSD
                     AYKVQEILERFA"
     gene            23939..>24838
                     /locus_tag="RJ336_000538"
     CDS             23939..>24838
                     /locus_tag="RJ336_000538"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDZ5213006.1"
                     /translation="MKLVLFLNMGGATNLQDCEVFLKNMFNDPYILGIKNRFLRKFVA
                     WIITKARVKAMQENYKKMGGKSPLNELTQSLCDKLNLKQDEFKFDFVNLYVPPFATEI
                     LQKYTLNASDEIILFPLYPHHSCTTVTSSLEVLQNEISKQKIQAKVKTIDIFYKNELY
                     NEMIVSHILAKKSKFDAKILIFSAHSLPQSIIDKGDLYEKHVNDHVEILKEKLKDHFD
                     EFILAYQSKLGPVKWLEPNTSDVLANLNDKALIYPISFCIDCSETIFELGMEYKHLAK
                     CDYDLISCPNDSDEFMEFILNSIN"
BASE COUNT         8777 a         4093 c         3520 g         8448 t
ORIGIN      
        1 ttaaaaaatc aaattggata ctagagatga caatcccatt tttaagcact ataaacaaag
       61 ctaatataag cacaacaaaa aatacaacaa tatataaaat tttctttttc atacgcaact
      121 tctttttgat atttattttg gggatttttt attatctaac tcagccttta aaaagcaatt
      181 ctgtggtatt tattccccaa ggttcaattt ctcaaattat aacatattta aagcaaaata
      241 aatatcagat gagtagtatt gataaatata ttttattttt tttaggacac cctcaatcag
      301 gctggatcaa cataggtaca aaagatttaa atagggctga atttctacat aaactcacta
      361 ttgctaaagc agcgcttcaa accattactc ttatcccagg agaaacaagc gtaatctttt
      421 tagaacaagc agccaaacaa cttgaacttg ataaagatat gcttttaaaa gaatttcaag
      481 ctcaagctcc ttatgatgaa ggagtttttt taccagaaac ttataaaatc ccaaaaggca
      541 ttacagaaaa tctactcatc caaatgcttt taaaccatgc tgaaatttcc aataaaaaaa
      601 cttctgagaa aatttttggt gactataatc caaaaaaatg gcaccaatat atcatcatcg
      661 cttctgtaat acaaaaagaa gctgctaatg acaatgaaat gcctatagtt gcaagcgtaa
      721 tttataatcg acttaaaaaa ggtatgaagc ttcaaatgga tggaacttta aattatggaa
      781 tttactccca tgtaaaagtt accccacaaa gaataagaca agataatagc tcttataata
      841 cctataaatt tacaggattg cctaaagaag cggtttgtaa tgtttcttta gctgctattc
      901 gtgcagctat ttttccttta aagacagatt atttatattt tgtgcgtgat aaaaatactg
      961 gagttcatat ttttagcaca aatatagatg atcacaataa agccataaat ttacaaaaag
     1021 gaaaataatt ttgatatttt tatacaaaat agttaaattg gaacagtatt tgcttgttaa
     1081 tattaaaaat tataaaaagg ataaaaaatg attaacccat ttaaatcaaa agaactggtc
     1141 actggtgctt tagcgggtag aaatctaaga aatcaactca tcaatgccaa tcttgcaaat
     1201 gttgatactc ctttttataa agcaagagat attgaatttg aaacagcttt ggtaaatcgt
     1261 gcaaatgaaa ttttcaaaaa aaatgataat aaagaattgc aattagccgt aactgaagaa
     1321 gggcatcaaa aaccttggaa attccctgat cctagtaaat ctactattta cttaagagat
     1381 ggtcatttag caagaaatga tgcaaatact gttgatctag atgtagaaac cacagaaatg
     1441 agtaaaaata cagttatgat aacagctctt gatggagttt taagaagaca aagcaatatc
     1501 tttagttcta tacttgatgc aagctctaaa ttaagttaaa ggtaaattat ggcatactta
     1561 agtgattttg atattagtgg ttatggttta agtgctcaac gtttcagaat gaatgttatt
     1621 agctctaata tagctaatgc aaacactaca agaacagctg aaggtgggcc ttatagaaga
     1681 cgcgaagtga tctttaaagc aacagatttt gataagcttt taaatgagca aattaacaaa
     1741 gataataatt ttttaaaata tgaaaatcct ttaaatgatc caagttcgcc agaagaagct
     1801 aaacctgcta ttcaaagtgt tgtagtggat aaagtggtca gagatgacaa agattttcgt
     1861 atgaagtatg atccaagcca tcctgatgca aatgctgaag gttatgtagc gtatccaaat
     1921 gtaaaccctg tcattgaaat ggcagatttg attgaagcta caagagctta tcaagccaat
     1981 gtaagcgctt ttacaagtgc aaaaactata gctcaaagtg cgattgattt attaagagga
     2041 taataaaaaa tgaacaatat taatgattta agattaaata ataatatttc aaataccaac
     2101 aaaagtcaaa attccacagg aattggtgat gaatttgcca agatgcttaa aaatgaaatc
     2161 gatgatttaa acaaagcaca agaaagtgga gaagctgcaa tgacagacat tgccacagga
     2221 caagtaaaag atttacatca agcagctata gctatcacta aagctgaaag cagtatgaaa
     2281 tttatgctag aagtaagaaa taaagcgatc agtgcttata aagaaatcac aagaactcaa
     2341 atttaaaccc taatgcaaga atataaaaaa aatagggttt caaaagttgc ctttgcctac
     2401 tgcatggcac ttttgtttat gattattttt atcagctcta ctttttttct tacatcaaaa
     2461 cgtcatatac ctaacactga aaaagatcaa tacgctcttg ctctaagagg atcgattata
     2521 accaaagata attttactat cacaagttct aaacaaattt atcgcgctga aattgatctt
     2581 agaagcatta acaaagataa atttgatcta tttttaaagc tttttcaaat ttatagtgga
     2641 ataagtaacg atcaagtagc agatattaaa aaaagaatgc aaaatcaaaa aaaacgctct
     2701 tataattttg ttcttttgca aaacttagat tccaagcaag caagctatct taaagacctt
     2761 gctaaaaaac tttatataca aggttttttc aaagctttta caaacaactc tggaagagtt
     2821 gaaacaagag gattaaatat catcgaacat gaagaagata gaatttacat gtcaaaagat
     2881 tcttttactc ctattatcgg ttataccaaa atgatattag atccagaaag tggaatttta
     2941 aaaaatatag gagttaaagg tttagaaaaa tactacgatg aatgtctaag ccctgttcaa
     3001 aatgaaaaaa ttcaaggact taaagatata ggtggaaata ttattttaaa tctaaattca
     3061 ctacaacaaa aaaagatcaa tggttgtgat ttatatttaa atctttcttt aaaactgcaa
     3121 aaaagtatag agaaagctat agatcaaaga aatgaggatt taaaagccaa tgaaatcata
     3181 gttggagtaa tggaaagcaa aacaggaaga attttagctc tagcaagctc aaggcgctat
     3241 gatccgcaaa atcgtggaaa agatctatca gttcttaatg caagcgctat agaatacggt
     3301 tatgaagcag gttctgttat caaacctttt atctttacaa cagccttaag acttggtaaa
     3361 ataaaaatgg atgaagtgat taatacttat ggcggttctt acaagctagg acgttttacc
     3421 atcaaagacg atcacaaaat ggacaaaatg actatggagg aagttataag atattcttca
     3481 aatataggca tgatacaaat tgccaaaaga cttaacaata tagaaatcgt atcaggactt
     3541 aaaatattta aatttggcga aaaaagtggt attgatctac cctatgaaca aaaaggagaa
     3601 attccaaatc ctaagcgctt aagagatata gaaaaatctg ttttaagtta tggttatgga
     3661 cttaaaacaa cctttataca actccttgca gcttataatg ttttcaacaa tgatgggttt
     3721 tatatcacac cacgtttagc tgaaaaattc tatcaaaatg gacgctttac aaatcttgat
     3781 gatgatgtaa aaaaagaaaa aattctttct agcgaagccg ctaaaacgat gcaaaatgtt
     3841 cttataaatg ttatagaaaa aggaacagga aaaaaggcaa ttacacaagg tattattgca
     3901 ggaggtaaaa caggaacggc aagaatagcc gaaagacaag gttatacctc aaatcgctac
     3961 aatgcatcct tttttggttt tgcaaatgat ttaaatcacg cctataccat aggagttctc
     4021 gtaagacatc ctactaaacc ttatagttat tatgctgcac aaagtgcttt gcctatgttt
     4081 aaagatgttg ttgatatttt aatcaatgaa gaatttctaa cgcctataca agacaataac
     4141 caaactagca caaacaacta gtttgatata tctttagaaa atatcacctc aacagcacct
     4201 ataagttctt cagcaatctt agcagcaaaa gttgtatcat taagtattga aattccttca
     4261 gctgttgtga tttttcttac tgaaataaga tgttcaacat tgcccaaggt taaagtatca
     4321 atttctttta aaatttcttt tcctttttga agatttttaa taatcaaata aagcttttca
     4381 cgatcttcaa ccactctaag ctcttcgata cttcttaaaa gctctcctaa attcgatcta
     4441 attttattgt actctaaagc caaaaattca ttagaagaac tagaatattt cttaatattt
     4501 gcttggataa tttttaaatt tttagttgtt tcggctaaat ttttagctgc catcttaaag
     4561 gtaaaaattt tatgattctt tgtttcatcg ttaatataaa cttgtgcttt agttgaaaaa
     4621 tcgataatag cttcaaaaag aacctttatc ctagtttgat acaaatagtc caaatccaca
     4681 tttttactaa accacttttt attttctaaa atttctttaa aacttttatc actttgtata
     4741 tctttacgac taaaacctat agcatgagca acaattgcat aggtattgtt ataaagatgc
     4801 tcgctttctt tccttaaagc tttgatggct gtgtcactaa acttaaccaa actactatca
     4861 agatataaag gcttgtcttt attcttatct ttaggagctt ttactatctt atttaaaaaa
     4921 agaacaattt gaggagtaaa gaatgaaaaa agcacaacac caattaaatt aaacaaagtg
     4981 tgaaataatg ctactttcaa agctatatct tctatgttta atacaattga taaaaaatta
     5041 agaaaatgta taaaataagg aaaaataagc actattaaaa aagctatacc aaaattaaaa
     5101 atacaatttg caaacgctaa tttctttcct tcaatattgg tacttaaaga agctaaaaca
     5161 gccgttacaa ctcctccaac actagtacct aaagttgctg ctaaggaatt ttccaaactg
     5221 atttgtcctg caagtaaagc agcgacaata atagccattg tagctgtgct tgattgtata
     5281 actcctgtaa gcaaagcacc taatcctaaa aaaacaaaaa ctcctttaaa cccagcaaaa
     5341 tcaaaacgag aaagatcaat tatatgttta aaattttcaa aaccactttt aatataatcc
     5401 acacccaaaa agaaaaatcc tataccaata aaaatattac ctaaaccttt taaaacacta
     5461 tctttttgaa agaaaaataa tactccaata atcaaaagtg ggatagctag cattgaaatt
     5521 ttaatatttg tcaaaccaac aatcagccaa gaacttgccg tatttcctaa atttgctcca
     5581 aaaataatcc ctatgcccgc acccaaagaa ataagccctg cgctcaaaaa agaaatcgta
     5641 ataatagaaa ctaaagttga agattgcata attaaagtac ttaaagtacc aaaaagtata
     5701 ctttttatct ttgtatcggt tgacttcgct aaaatttttt caagcaaacc accactaaaa
     5761 gctttaaaac ctatacctaa attagtcatt ccaataagaa gtattgccac tcctgctaaa
     5821 agattggcaa gctcgtcata acgaattaaa ataaaaatca gaactaaagt aaaaatactc
     5881 catgaaataa atttaaaata ttttaaagaa tttctttcct cttgcaatgc ctaacctttt
     5941 agtttttcaa attcattcat cagaaattct cttaaatttt cggcttcttc ttcgcctttt
     6001 tctagatact caagcaataa attttctaat tcctttaaaa aagaaaaaag ttcattttgc
     6061 cagatactat cgtttttatt gcttaaattc atggtttgta tgaaagtcaa ctctctgctt
     6121 aaatccccaa gtttttctaa aaattcatct ttttgatcag aattttttaa tgctaaatta
     6181 gcattttgga cattttcttt aaattctctg attttttcat cgattaaatc gcaaaatttc
     6241 ggataaatat ccattttaat aggctctaaa agggtttgct catctatatt taaagtaagc
     6301 tttttaacag caaaataaag agctaaaaaa gacaaagctg ctatgagtaa ataaattcct
     6361 agcattaata acccttaaga gctagcattc cgccatctaa attgatactt tcaagtccca
     6421 atctttcagc tataaattca gctgcaacca tgcttctatg gccactacga caaataaaag
     6481 caagtttttt actttcatct cttttgcttt gaaattcatc taaaaattta gcatttaaaa
     6541 gcccttgatt atcatataaa gccacacatt gcgcattagg taaaatacct tcttcccatt
     6601 ctaaaggagt acgcacatca aaaatttgat atgcgtttaa atcttgcttt gtccaaagac
     6661 ttgcagggat attttctatc atgaaaaagc cttattgata atttttgtaa ggcttgcatt
     6721 aaattcagca ggattatcca ctcccatacc ttcgcttagt tttgccatat ttaaaactag
     6781 ggttgctata tctgcactaa aactttcgtt gtttttaaga cctgtaaaaa tagcgtgttt
     6841 tggattgatt tctaaaatag gtttgaaatt ttgctcttga cccatttgtt ttaagagttg
     6901 ttgcatagca aaatcaggtt tatttttatc ataaactata caacttgggc tatctttcaa
     6961 acgactggtt aatcttacat cttcaacttg atcttttaga agttctttaa atttagctac
     7021 aagtggagca aaagtatttt tttcttcatc acttagttca tttttatctt ctacttgatt
     7081 aatggctaca aatttcaaac cttcaaattc tagcatagga gttactaaag aatcaatctc
     7141 atcatccatg agtaaaactt ctatattttt ttgtttatac tcttcaagca aaggagaggt
     7201 tcttaataaa ctttcattat ttcctgctat ataaaaaatt tccttttgtt cgccttgaag
     7261 gtcattttta tactcctcta aagagcgtaa attttcacct ttagtgcttt tataaagcat
     7321 aagttttaaa agactatctt tttctccgcc aaaaccataa agtccttctt ttaatacctt
     7381 accaaaggtt ttaaagaaag ataagtattt ttctttatca ttgtttttga gtttttcaag
     7441 ttcgcctaaa atctttttaa cgctagcttc tttaacgcct tttaaaattt gattttcttg
     7501 taaaatttca cgacttacat taagtggtaa atcttctaca tcgataatcc cacgcacaaa
     7561 acgcaaataa gttggtaaaa gttctttatc gtcatcgctg ataaatacgc gttttacata
     7621 aagttttaag ccgctttgat aatccacacg gaataaatca aaaggtgcat tttgtggtat
     7681 gaaaaataaa gaattgtatt ctaattttcc ttcactttta gtgtgaagat aaagtaaagg
     7741 tttgtttgaa tcatgaaaat tttgctcata aaatctttca taatcttcta ctttaaggct
     7801 tgatttttgc attctccata aagcgttggc tttattgatt tgagaaattt taagttcagt
     7861 ttttccttct tcttcgcctt ctttagcagg agtaaattct tctttttcca tgaaaattgg
     7921 aaattgaata tgattagaat atttttctat aatgctttcg attttataag tattagcaaa
     7981 ctcatcatct tttaagtata aagtaatgct tgtgccttgt tcttctttgt ttgcgtcatt
     8041 aatctcataa ccatttgcat cagaactcca aagataagct ttatcatcta aagctttttt
     8101 acttaaaact tcgattttac tagccaccat aaaagcagaa taaaaaccta ctccaaattg
     8161 tcctatgagt tgagaatctt ttttagcatc accacttaaa ttttctaaaa aacttttagt
     8221 accgcttttt gctatggttc caaggttgtt aataagatca tctttatcca tacctatacc
     8281 attatcacta atgcttaaag tttttttatc tttgtcaatt ttgatttcaa ttttaggttc
     8341 aaattttaag cttttatatt tatcatcact tacgctcaaa aaattaagtt tgtctaaagc
     8401 atcgcttgca tttgaaataa gctctcttaa aaaaatttct ttattagaat ataaagaatg
     8461 tatcataagc tgtaaaagct gattgacttc ggtttgaaat tgcattttaa tttcctttgt
     8521 aattttttaa agtggtattt tagcaaaaaa tacaaattct aaagtaaatt taaagattta
     8581 tttgaaaatt ataaagccaa gccatgcggc aaataagcaa agaaagacat ttaagataat
     8641 atttaacgca aaatgaagat aatttccact ttgcaaaaga agtaaatttt gataagaaaa
     8701 agtagaaaaa gttgtaaaag ctcctaaaaa acctgtactt ataaagcttt taagtaaagg
     8761 agataaacct ttattttgtg cataagaaaa caaaagtcct atgataaaag aacccaaaac
     8821 attaacaaaa agagttccaa ggctgataga ataaggaaaa aatttattca ctaaatttat
     8881 agaaaacatt cttaagattg ctcctataaa tcccccaaaa ccaacaacta aaagggtatt
     8941 tagcaaagct tagctctttc ttgatcgagt aattcttgca ttttttttct agtgttttca
     9001 agccatttgt catcatttgt atcgactaaa tccatacaaa tgattttaag cactccgctg
     9061 cttgcactaa aactttttgt gtctaaaatt tttacagaat ctacaattaa aataggttga
     9121 actttaagat ttaatttttc acttaaaatt tttgctccac tttgaaattt aagcattttt
     9181 tcatttttag atctagttcc ttctggaaaa atagccaaaa ccctatcttc actaattctt
     9241 tcttttgctt cttttaaaac tcgtactaaa tcacgcggat tttttctatc tatacaaaga
     9301 agttttggtt ttttcatggc gactttgaaa ataggaattt ctcctaattc ttttttggca
     9361 atccagcata aatttttagg atataattct tctaaagcga tgatatctaa agcactttgg
     9421 tgattcatta aaatcatctg agcttgtgga ttaaaagtac caatgatttc ttgtttataa
     9481 gagatagtat atctttgaaa tttagcccaa attttgcgga ttttccaaag tgtgttttga
     9541 gattttgtaa agcaaaaaca aaaaactacc aaagcaacgc ttaaaacaaa aaaaatccaa
     9601 aaataaagag ctttaatttt tttgtaaatc atctttatta acccaaccta tttttccatc
     9661 agaaaacagt actttaatat aattttgtcg tttgcctaaa acttctactt tttcatctgc
     9721 atttgccgta taaaaataag ttgaaggctc tgtaggtaaa attttagccc tagaaccagc
     9781 cttgataatt gcattttgag tattggtatc tacaagaaaa ctaagtgcaa aacaaacaac
     9841 tgccaaagcc agaataatgt aattttttct ccatacaaat aaagctccaa ataaaaccgc
     9901 taaaaaccat aaggtatatt gtttataaat atttaagtct ttatttacag gatttaaatc
     9961 actctgagtg ctgatctcat cgtcactaat ttttagtttt aaatttatat tttcaagctt
    10021 tttactgtcc ttattgaaat acgaaaattc aaaatttgtt ttacttaatg gcaaaatagc
    10081 ataataaaaa gcactagaag cattaaaatc cccttttaaa ttttcaatac cttgcttttg
    10141 aattccttct ataaaaaagc ttttaagatt tgtattggtt gcgtttagtt ctaccatcat
    10201 aatgatatta gcatcatcaa aataactcgc tttaactttt ttaatttcca aagaacttgc
    10261 cacaaggtgt gaaaaatctt tattggataa agtattttca aatttgatag gattaagatt
    10321 gatatcggcc tcttgaaaag cttcattatt tctaagaagt ttgatagaaa ttttactcaa
    10381 actagcattt gaatttttgg cttcaaacca taaagttgtt ttatattcgt tattgataaa
    10441 ttcccatttt gcatctggat ttaaaaaaga taaattagtt ttttctacgc ttatgttaaa
    10501 atcaaatttt gtattttccg tagtgcgagc atagatcgta ataggaaaaa cttctccaac
    10561 atataccctg cttggatatt catcatttgt aagaaccaaa ctccctttag ctacaaaagg
    10621 atcatctaca ttgctttcaa agtcattgtt ttcatcactt ggcggaatat tttgataaat
    10681 tttttgttct tcttggggta atttttgtaa ttctttttgc atattttcat cttggccgcc
    10741 aaatacagaa atttcacccc tgccaaacaa tacaacaaca ctaaaaatta aagttaataa
    10801 aattttcaaa ataaaaagcc tttaagcatt ttcaaaccta tatcattacc taggactttt
    10861 tcacaagcac gctcaggatg tggcatgagt ccaaagattt ttttgttttc atcacaaatt
    10921 cctgcgatat caaatacaga accatttgga tttggctcgt attttaaagt aataagatct
    10981 ttatcttgca attcttttaa agtagcctca tcagcgtaat aatttccctc tccatgagca
    11041 attggtaaat taataatttc atcttttttg aaatttttca aaaaggcatt atcattagaa
    11101 actactctta aattttggtt ttttgagata aaactaagat tgttgttatg cttcattgca
    11161 ccttttaaaa gaccgctttc aagtaaaatt tgaaaaccat tgcaaatacc taagatatat
    11221 cctccctttt ttgcatgatt aaaaacacct tgcatagcag gagcaagttt tgcaatagct
    11281 gcacatctta gataatctcc ataagaaaat ccgcctggca aaacaactaa atctgtatca
    11341 aattcttttt cttcatgcca aacaatctgc gtttttactc caagtttttc aaaggcataa
    11401 gctgtatcaa attcacaatt tgtccctgga aatctaataa tagcaacttt cattttactc
    11461 tttctcaatt acaagctcat aatcttcaat gatgctattt accaacaact cttcacacat
    11521 tttttttact tgttctttgg ctaatttttc atctttctca tcaagagaaa ttttgatttg
    11581 ttttgctatt tttacttctt taacactatt aaaatttaaa gaatgcaaag ctttttccac
    11641 cgctttgcct tgtggatcta aaaccccatt ttttaaagaa atatttacaa taacttccat
    11701 atttttcctt aatttaatat tctttttaaa acttcttcat aagccatttt tacattacct
    11761 agatcttgac gaaatctatc tttatctaat ttttcattgc taaatttatc ccaaaatcta
    11821 caactatcag ggcttatttc atcagctaaa acaagttcat tatctttagt taaacctagt
    11881 tcgattttaa agtcaatcag ccttaaattt ttattgtcaa aaaatggagt taaaatagag
    11941 ttaatctttc tagccatatt tttaatttca ctaatttgag cttcattttg cactaaattt
    12001 aaaatcaaac aatgctcatc attgataaaa ggatcgccta aagcatcatc tttaagacaa
    12061 aattccacca aagcaaaagg tagcacagtg ccatctttaa tgcccagtct ttttgtaaga
    12121 gaacctgttg caacattgcg tactataact tcaataggaa caattttaca ttttttaacc
    12181 acttgttctg tatcgcttat agtttctacc aaatgggttt taatcccatt tttttcgagc
    12241 aaatgaaaaa tttcagtact gattttacag tttaatgcgc cttttccact ttcattgcct
    12301 cttttttctg cattaaaagc agttaaatca tctttaaact cactaattag taaattttca
    12361 tcatcagttt tgaaaagttt tttacctttt ccttcgtaga gcatttcttt ttttgtcatt
    12421 ttattgtcct tgtttgatat ttaaaatttt aatagtatca atagctgatt ttaactgtgc
    12481 gtcatcattg atttgttttt gactgattag atttttattg tctttatttt cttgtttatc
    12541 ttctttttta tttttatcta ttttttcaag ctcactttct aaatgttgtt ttaagtcgct
    12601 ttcttttata gaaaaaccat cttcttgagt atttacttta cctggaaaaa cttcaatatc
    12661 aggttttaca cccactgctt gaatagtacg cccgcttgga agataatatc ttgcaatagt
    12721 aagccttaaa gcttcagttt tattaatagg tatgatttgc tgaacactac cttttccaaa
    12781 agtattttca cccacaataa caccgcgttt aagatcttgt aaagctccac ttacaatttc
    12841 acttgcacta gcacttccac catttacaag cacaaccaaa gaagcattag aaattttgtt
    12901 tttaggatcg gctttatatt cttgattttc acttgcgatg cgtccttttt gagaaacaat
    12961 aacaccttta tctacaaata aatttacaag tcctatggct tgatttaaaa gtccaccagg
    13021 attatttcta agatctaaaa taactccttt aacattagga tattttttaa gttctttact
    13081 tgccacatct acaacatttt tatcaaaatt tgtaacccta agataaagaa tgttttcatt
    13141 ttctatcatt tttgcataaa cactttctat cttaataatt tctcttgtaa gtgtaacatc
    13201 aaaaggtttt gttgcgcctt ttctaaaaat ggttaaagtg atttgagttt ttggcttacc
    13261 acgcatttta tctacagcat cattgagatt aattcctaaa gtggcctcat cattaatttt
    13321 taaaataata tctcctgatt ttatccctgc tttatctgct ggtgttcctt ctataggaga
    13381 aacaactgtt aaagcgccat ctttcatacc tacggttata ccaaggccac caaattcgcc
    13441 attggtttga attttcatat cattaaaatc tttttcattt aaaaaagaag aatgcgcatc
    13501 aagattgctt aaaagtcctg ataaagattt atccaccaaa tcgctgatat tttgatcatc
    13561 cacatagtat tgctctacta tggcaagagt ttttgtaagc ttatctaaag cttctaggcg
    13621 tttttgaacc tgctcttctt tttgatcaac tttagcttgt aaatgacttg ttaaaaatag
    13681 acataaaata aaagtagtgg caaagcctgc aagacccgca aaaaatcgtt ttgttttcaa
    13741 aataagctcc atcattgagt tttagtttaa agagtaaatt ttaataaaaa ttgcttaaaa
    13801 cttcgtaaat aaatttaaat tcttaaaaat atgttaaaat agactaaaaa ttccaaaaag
    13861 aaagttaata caatgtgcca agaaaaacat actcatacac attctcaaaa acatcttaaa
    13921 gcagtttgca atcgtctaag tagaaccata gggcatttaa gcgctattaa aagaatggtt
    13981 gaaaatgaca aagactgtag tgaaatttta atccagcttg ctgccgtaaa agccgaagtt
    14041 aacaatactg caaaagtagt tttaaaagaa catttagctc attgtatggt acatgctgta
    14101 gaagaaaatg atattcaaag tatagaagaa ttaaacaagg ctatagatat gtttatgaaa
    14161 taatctaaaa ttagtcattt gtcctattat ttaaaaaatt ttactcaatt aacttgacat
    14221 tatatgacta aagttatata atagcaagta tataaactaa ataaaggata aaacatggca
    14281 aatatacaaa attttctaac tgataatatg ctttcaaacc ttgaaagcgc agcatcttta
    14341 gctatacatt ctaaaaataa tgaagttgca cctttacatc ttttatgggc tttaagcgta
    14401 gatagtacaa gtattttaaa tcaaatttta aataaattaa atatttccaa agaagcctta
    14461 gaacttgaaa ttaaaagcag aatttcaaaa cttgcaacga gttcaaatgt aaaccgtgaa
    14521 aatatacgct tttccaatga acttataaat tcattagaaa atgctaaagg attaatgagt
    14581 gctaatggag atagttattt aagtgtggat acttggcttg taagtgaaag tcaaaaaagt
    14641 cctactaaag aaattttggc gcaattttta gatttaagag aatttcaaaa agagcttgaa
    14701 agtctaagag cgggacgcaa aatcgatagc aaaacaagcg atgaaacctt agacagctta
    14761 aataaatttg gtatagattt aaccttaaaa gcaagcgaag gtaaacttga tcctgttata
    14821 ggcagagaag aagaaatcga acgtttaatg caaattttaa tacgcaaaac caaaaataac
    14881 cctatacttt taggtgaacc aggcgtagga aaaacagcta tagtggaagc tttagcacaa
    14941 agaattatta aaaaagatgt tccaaaatct ttgcaaaata aaaaagttat cgctcttgac
    15001 atgagtgctt taattgcagg tgcaaaatac agaggagaat ttgaagacag attaaaagct
    15061 gtcgttaatg aagtgataaa aagtgaaaat atcattcttt ttatcgatga aattcacact
    15121 atagtaggag ctggagcgag tgaaggcagt atggatgcgg caaatatttt aaaacctgct
    15181 cttgcaagag gtgaactcca tactataggc gcaactactt taaaagaata tcgtaaatat
    15241 tttgaaaaag atgcagcctt gcaacgccgt tttcaacctg taaatgtagg tgagccaagc
    15301 gttaatgagg ctttggctat gttaaggggt ataaaagaaa agcttgaaat tcatcataat
    15361 gtaactataa atgatagcgc tttagtagct gcagctaaac tttcaaagcg ttatatagcg
    15421 gatcgttttt tacctgataa ggccattgat ttaatcgatg aagctgcagc tgaactgaaa
    15481 atgcaaattg aaagcgaacc aagttcttta agaaaagtac gcaaagatat agaaacttta
    15541 gaagttgaaa atgaagcttt aaaaatggaa aatgacgaga aaaatcaaaa aagacttgat
    15601 gaaatcgcaa aagaactagc caatttaaaa gaaaaacaaa atgccttaaa ttcacagttt
    15661 gaaaatgaaa aaagtgtttt tgatggcata agtgctaaga aaaaagaaat tgatctgctt
    15721 aaaaatgaag cttctttggc taaagctaga ggtgaatttc aaaaagcagc cgagctagag
    15781 tatggaaaaa ttccaagtct tgaaaaagaa gtagaaattt tagaagataa atggaaaaaa
    15841 atgagtgaaa atggagtttt acttaaaaat caagtggatg aggatttggt tgctggaatt
    15901 ttaagcaaat ggacgggtat tagcgtgcaa aaaatgttaa cttctgaaaa acaaaaattc
    15961 ttagaagtgg aaaaacattt aaaagaaagt gtcataggac aagataaggc cttaagtgct
    16021 ttagctagag ccattaaacg caacaaagca ggacttaatg cggacaataa acctatagga
    16081 agctttttat ttttagggcc aacaggggta ggaaaaacac aatcagctaa agctttggca
    16141 aaatttttat ttgacgatga aaaagcaatg attcgctttg atatgagtga atttatggaa
    16201 aaacatagtg tttcaagact cttaggcgca cctccagggt acataggaca tgaagaaggt
    16261 ggagagctta ctgaagctgt gcgaagaaaa ccttatagcg tgcttttgtt tgatgaagtt
    16321 gaaaaagcac ataaagatgt atttaatgtg cttttaggga ttttagatga tggtagagca
    16381 accgatagca aaggtgtaac agtggatttt aaaaatacca ttatcatttt aacttctaat
    16441 attgcctcaa gcgctattat gaatttaagc ggaaaagaac aagaagatgt ggtaaaaaat
    16501 gagttaaaaa atttctttaa acctgagttt ttaaaccgct tagatgatat tatcaccttt
    16561 aatccacttg gaaaagatga agcttatgaa atagttaagc ttttatttaa agatttacaa
    16621 atgagcttag aaaacaaggg gataaaagcg agtttaagcg aaaatgcagc ccttttaatc
    16681 gctaaagatg gttttgatcc tgattttggt gctagacctt taagaagagc tatttatgat
    16741 cttatagaag ataaattaag cgatatgata cttgctgatg aacttcatga aaatgatagc
    16801 attatcattg atgcaaaaga tgatgaaata atcatcaaaa aagcttaatc attttgaaag
    16861 tagatctttc tactttcaaa atataatctc gctttcatta aatttcatat ttgcttttgg
    16921 caatggtgat ttggtggtat aataagcact ttctccttta taatttccac gataaacccc
    16981 attaggaatg ctaaattttc tagttgtatc agggaatttt tctatatatt gagttaaaaa
    17041 ttctctaaac acaggagcag ctgttctagc cccaccttct gtataacgca taggcttgtt
    17101 gttatcattt ccataccaaa tgattgcttc tatttcaggc gtaagtccac aaaaccaagc
    17161 atcaacactt ttattcgttg ttcctgtttt tcctgctatt tctatatctt ttactcttgc
    17221 attgcgtcct gtgccttttt caacaacatt tctcatcata tctaaaacca gaaaactttg
    17281 cgcttcatcg ctgactttac gctcatttga gttaaattcc atgatggttt taccggtttt
    17341 atcctgaact tgtctgataa tttgaggatc tttaatcgta ccatagttcc caaacatggt
    17401 ataaaatttc gaatactcca aaggagaaat accaaaactt cccaatacga ttgataaatt
    17461 aggcggtata tctttaaatc caaattccat tagtttagag taaagaacat caagccccat
    17521 atcaagtgcg agattaatgg tagctaaatt tcttgatctt gttaaagctt cttttaaggt
    17581 aattaaacct aaaaatttac ccccttcatt tttaggtttc caatcctcat tattacccgc
    17641 tccaccttca aaaattctag aaatatcagc aatttcactc ataggcgaat atcctaaatt
    17701 aatcgccact tgatacacaa aaggtttaaa agagcttcca ggttgacgca tactttgagt
    17761 agcacggtta taattacttt tttcataatc aaccccacct accaaagcta aaacatcgcc
    17821 actttgatga tttaccacga ccatagctcc gtttaaagtg cttaaatttg catctttatc
    17881 gcgttttact atctcatcat aaccaaattt caaagcattc tgcgccatat tttgaacatc
    17941 taagtctata tttaaaatga ttttatatcc acctgttttt aagtctttga tattagggct
    18001 taattgttta atcacttcat ctacgacata aggagcagca ttttgagtaa gcgtatcatc
    18061 ataaacttgc ggaatttctt taatggctgt atcataatct gcttttgaaa tccaacctag
    18121 attatacatt cttgaaataa cattatttgc tcttgagatg gaaagatcta aatgctttgt
    18181 aggatcataa ctgctaggtg cttttggcat acctactaac atagcaatct ctttaaggct
    18241 taattcattt aaatttttat gaaaataccc caaagatgcg gtttttactc cataataccc
    18301 atgtccaaaa aagataaaat ttaaatacct ttctaaaatt tgctctttag ttaaaatggt
    18361 ttccatttta taagcaagca aagcttcgcg aattttacgc gtaatcgttc tttctggggt
    18421 taattctgtg tttttaataa attgctgggt aagagtggaa gctccttcca tggtttttcc
    18481 accgcttttt atgattttta cagcagctct aaaaatggca tcgatattaa ctccattatg
    18541 ttcaaaaaag cttgtatctt ctatagcaac taaagcttct ataaggcgtg gaggaagctc
    18601 ttcataagga gcgtaaaaac gatgctgttc aaaaatatta gccacaagct tgccatttct
    18661 atcgtaaatt tgtgttgtaa gaggaggttt gtattcttta aaagtataac cctcagtatc
    18721 agcacttgtg aaaagataag ccacataaat aaatccagct ataaacaaaa gagtaaaaaa
    18781 tgaaaaaata tattttaata ttttcataaa taagccttta aagtttggat atcaagccct
    18841 aaagcagtgc ttagatttcc tacttggtgg gtgatgaaat tttgatgaaa accctcacac
    18901 ataatacaac ccgccttgcc tttataaaga tcattttcta cataatctct taaagcattt
    18961 tcatcaaaat ttttaaaata aagcgtagtt tttgaaagag aaaaaactct tttttcaggt
    19021 tttacaagca aaaaagccga taaaatactt gcatacttgc cattttgcaa ggcaagcatt
    19081 tcataagctt cttttttatc ctttgctttg gtaagaattt tttcatctat acaaactata
    19141 ctatctgcaa aaagcaaatt ttggttttga aaatctttgc ctaaagtact taaaaattgt
    19201 ctttcttttt caagaactat tttttgaaca tataaaaaag gtgaaatatt cttatctaaa
    19261 ttttcatcat aatcaaaact aacttgccta aaatcaatct ttgcggtttt aagcaagtta
    19321 gctcttgaaa tggaacttga agcaagaatt aacattaaag tgctttttct atcgtttcta
    19381 agctttgttt taaagcttca ttgattttgc ttaaatcttt tccacctgca gtagcaaaat
    19441 catctcttcc gccaccattt ccacctaaaa tttgtgccgc ttctttaacc aaagctcctg
    19501 cttttaaagg cacatcttta acaccagctg ctaaagtgat tttttcatct tttacttgga
    19561 taagtaaaat caccgcttta gcaaatttgt ttttaaaatc atcaatcata gctttaatat
    19621 cgccattatc tatacgtttt acgcaaattt caacaccttg gatattttta gaatcaagct
    19681 cggttttact tgaattttta agctcatttt ttaaacttaa aatttcattt ttaagctttt
    19741 taatcccgct taaaatatca ttatttttaa gttcatcttt tactttagaa agttcttcaa
    19801 gttgattttt tacaaattct aaagccgctt tagaaaccac agcttcaatg cgtctaactc
    19861 cagcactcac accgctttct ttaactatgt aaaaacttcc tatttgagca gtatttttaa
    19921 catgagttcc cccgcaaagt tccttgcttt cacctagagt taaaacacgc acattgcctt
    19981 ggtatttttc attaaacaat gctatagcgc cgcttttttt agcttcttct aaaggcatat
    20041 tttctaagat agcttcgctt gagtttataa tcatttcatt gactcttttt tcaatgtttt
    20101 ctagctcttc tttgcttaaa gctttatgat gagtaaaatc aaatcttagt ttattgcttt
    20161 caaccaaaga tcctgcttga cttacatgag aacctaaaat ttctcttaaa gcatggtgta
    20221 aaagatgagt ggctgagtgg tggcgtgcga tttgctctct tttttctgta tcgattcttg
    20281 catgaactat atcgccaact tttagttctt cgcctgcttt tacaaagcta agattgagat
    20341 taaaaaactt ttgcgtatct aaaacttcac gcttggccat aaatccacta tcagcacttt
    20401 gccccccact tgttgcataa aaaggtgtgt ttttaagcat cacccaaccc gcatctttaa
    20461 gggtggaaac ttctttaaaa tcttcatcta aaagggctaa aattttactt tcgcattctg
    20521 ctttttcata acctacgaaa tgattttctc caaatttttc aagcaagttt ttaaaatctc
    20581 cgcttgcagt tttatctcca cttcctttcc aagaagcctt agcgcgtgct ttttgctcat
    20641 tcattaaaag ttcaaatttt tcttcatcaa ctttaagatt tttttctctt agcatatcag
    20701 ccgttaaatc aagcggaaaa ccataagtat cataaagttt aaaggctact tctccgctaa
    20761 aaatttcttt agtgttttta agctcttcat taaaaatttc aatcccattt tctatagtgc
    20821 ttaaaaatct ttcttcttca aggcgaattt gttcttttat aaagtctttt ttctcattaa
    20881 gataggtata atgtccgccc attaaatcgc atacaacatc aactagttta tacataaaag
    20941 cttgtttaaa acctaacaaa tatccatgtc ttaaagcacg acgcaaaata cgacgcaaaa
    21001 cataacctct accttcttta tcaaaactta ccccttgtgc aagcaaaaat acacttgatc
    21061 ttatatgatc agctatgact ctaaaacttg ctccgctttc ataaatataa gttttattac
    21121 aaagttttga aatttcattg atgattggca taaaaagcga gctatcaaaa ttgctaaatt
    21181 taccttcttt aatcgctgtt accctttcaa gccccattcc tgtatcaatg cttggctttg
    21241 gcagtgggct aagcactcca tcagcacttc tttcgtattg cataaaaaca agattccaga
    21301 tttctaaaaa tctatctcca tctccgccca tataatcttc gcttgagtta aaatgctctt
    21361 gtccttggtc ataaaaaatc tcactacaag gaccacaagg accagtatcg cccatttgcc
    21421 agaagttatc tttatcgcca aatttgcaaa ttctttcttt ttgaatgtgt ttttgccata
    21481 gattaaaagc ttcatcatcg ttttcatgca cggttacata aagtctatct ttaggtagtt
    21541 ttaaaacttc agttacaaat tcccaagcat aagctatggc ttgttcttta aaataatccc
    21601 caaagctaaa attcccaagc atttcaaaaa aagtatgatg gcgtgcggta tatcctacat
    21661 tatctaagtc attgtgcttt ccacccgctc ttatacaagt ttgacagctt gttttgcgtg
    21721 gagggtttgg gcgtggaatt tctcctgtaa atatactttt aaaaggcacc atacccgcat
    21781 tagtaaaaag taaagttgca tcatcaggaa ctaaaggact tgacggggtt atctcatgtc
    21841 cttttgatgc aaaaaaatcc aaataagctt ttctaatatc catgaatttt cctaaagaaa
    21901 tttttataaa aacatatcat accaaaatta ctttaaatta agtaaaacta aaatacaata
    21961 aacattttta tttaatttta tttctctaag gttttttatg aattttatca atcttcaagc
    22021 ccaatatctc gcatacaaag atgaaatcaa tgctgaaatt gaaagcgttt tatcaagctc
    22081 ttcttttata ggcggtataa agcttaacga atttgagcaa aatttagctc attttttagg
    22141 tgttaaacac gctataggtt gttcaagtgg aaccagtgct ttatatcttg ccttaagagc
    22201 cttagatatt ggcaaagatg atgaagttat agtgcctagt ttcactttca tagcaacagc
    22261 tgaagttgtg gccttagtag gcgcaaaacc tgtttttgta gatataaatt tatcaaatta
    22321 caatcttgat tttgaagcag tacaaaaagc aataacccca aaaactaaag ctgttatagc
    22381 agtgagtatg tttggacaaa tgagtgattt aagggcttta gaagaaattt taaaagataa
    22441 aaatatcact ttgatcgaag atggtgcaca aagttttggt gcaagtttca aaggagaaaa
    22501 atcctgctct atagctaaaa tttcatgcac aagctttttt ccttcgaagc ctttgggagc
    22561 ttatggcgat ggtggggcta ttttttgcca tgatgatgaa atttctaaaa aaataagaat
    22621 tttactcaat cacggacaaa cacagcgtta taaacatgaa tttataggta taaacggacg
    22681 ccttgatacc ttgcaagcgg cgattttaaa tgttaagtta aaatacctag aaaaagaatt
    22741 agacaaaaga caaaaattag cacaaattta taatgcaaat ttaaaaaact gccaaattcc
    22801 gcaaattgat ccaaatgctt ttagcgctta tgcacaatac agcgttttag ttgaagatag
    22861 agctagtgta ttgcaaaaat ttgaaaaagc taatatacct tatgctatac actatccaac
    22921 ccctttgcat aaacaacctt gctttagtga gttttcaaat ttagaactta aaaattcaga
    22981 atacgcaagc gaacacatct tatctttgcc tttttcacct tttttaagtg aagaagagca
    23041 agagcaagtt atttgtattt ttaaagatta attccatgaa aataggtatc ataggccttg
    23101 gaaaaatggg gcaaaaccac ttaaatgaac ttagtaaaaa ttctcatttt aaacttaatg
    23161 cactttttga cctttgcaaa aatccaaacc taaatatttt tgatgatatt ttttatgatg
    23221 atttggataa atttttaaat caaaataatg atattatcat catagcaaca cctacaaatt
    23281 cacatttaac aatagcaaaa aaagttttta aacaatgcaa atgcgtttta atcgaaaagc
    23341 ctttagctct aaatttaaaa gaaatagacg aaatttcaaa tttagctaaa gaatacagca
    23401 taaaagtagg tgtaggtttt tgtgaaagat ttaatcctgc ggttttagcc ctaaaaaaag
    23461 agcttgaaaa tgaagaaatt atcagcatta acatacaaag attttcaccc tacccacaaa
    23521 gaatcagcga tgtagggatt ttgcaagatt tggctgtgca tgatcttgat ttgctttgtt
    23581 ttttaagcaa acaagaaata acaaaaacca atttgcttaa aaaatacacc caagatcaaa
    23641 caagagaaag tgaaagcatt attctatgtg agcttgaaaa atgtattgct agcatacatc
    23701 aaagttggaa tagcacacaa aaactaagaa aaattcatct tattactaaa aatcattttt
    23761 atgaagccaa tttaaatgac ttttctttat taaaagatgg aaattttata gaacttactc
    23821 aacaaagtcc acttttttca gaacacgaag ctttgttaaa acttatcgat aatcaaccca
    23881 atcatttagc cagcacgagc gatgcttaca aagttcaaga aattttagaa aggtttgcgt
    23941 gaaattagtt ttatttttaa atatgggcgg agctacgaat ttacaagatt gtgaagtttt
    24001 tttaaaaaat atgtttaatg atccttatat tttaggaatc aaaaatcgat ttttaagaaa
    24061 atttgtagca tggatcataa caaaggctcg cgttaaagcc atgcaagaaa actataaaaa
    24121 aatgggcgga aaatcccctt taaacgaact tactcaaagc ctgtgtgaca agcttaattt
    24181 aaaacaagat gaatttaaat ttgactttgt aaatctttat gttcctcctt ttgccacaga
    24241 aattttgcaa aaatacactt taaatgcaag tgatgaaatc attctttttc cactttatcc
    24301 gcaccattct tgcaccacag taacttcatc tttagaagtt ctgcaaaatg aaatttcaaa
    24361 gcaaaaaatt caagcaaaag taaaaactat agatattttt tacaaaaatg agctttataa
    24421 cgagatgata gtttcgcaca ttttggctaa aaaaagtaaa tttgatgcca aaattttgat
    24481 tttttcagcg cattctttac cacaaagcat tattgataaa ggtgatttat atgaaaagca
    24541 tgtaaatgat catgtagaaa ttttaaaaga aaagctaaaa gatcattttg atgaatttat
    24601 tttagcttat cagtctaaac taggtcctgt aaaatggctt gaaccaaata caagcgatgt
    24661 tttggcaaat ttaaacgata aagctctgat ttaccctatt tctttttgca ttgattgttc
    24721 tgaaacgatt tttgaactag gtatggagta taaacattta gcaaaatgtg attatgattt
    24781 gataagttgc cctaatgata gtgatgaatt tatggaattt attttaaatt ctataaat
//
LOCUS       DAPWGO010000015        24501 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.016, whole genome shotgun sequence.
ACCESSION   DAPWGO010000015 DAPWGO010000000
VERSION     DAPWGO010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24501)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24501)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24501
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.016"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..389
                     /locus_tag="RJ336_000539"
     CDS             <1..389
                     /locus_tag="RJ336_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213007.1"
                     /translation="RVLNFIFDFFNFFMFCSLLAFVFNFVLKIKIKIIVLFLCFIMVL
                     GSYFLKEQRNNALKSEQEQILLWMNNFDFLKDNNLSLIQKEKDLFEKDLKDLREIFKK
                     NAFEIGIWWFSKEKEDLEKRINESLK"
     gene            386..1147
                     /locus_tag="RJ336_000540"
     CDS             386..1147
                     /locus_tag="RJ336_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HDZ5213008.1"
                     /translation="MRFDFFVSKRLNISRNKALELIENEEVLLNGKSFKASFDVKNFL
                     ENLKKTQDLNPEDILLTDGLKLDLLSEIYVSRAALKLKNFLEENDIEIKHKNCLDIGS
                     STGGFVQILLENQALKITALDVGNNQLHLSLRTNEKIILHENTDLRAFKSEEKFELIT
                     CDVSFISLINLLYYIDNLALKEIILLFKPQFEVGKNIKRDKKGVLKDDKAILKARMDF
                     EKECAKLGWLLKNTQKSSIKGKEGNVEYFYYYIKN"
     gene            1113..1967
                     /locus_tag="RJ336_000541"
     CDS             1113..1967
                     /locus_tag="RJ336_000541"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDZ5213009.1"
                     /translation="MLNIFTTISKINITSLAIGCFDGMHLGHLKLVKCLDENGALLVI
                     NKFKGQFLCSNRQKEEISGKKVIEVDFESIKSLDGKDFLSFLKKEFVNLKFIVVGYDF
                     SFGKNRAYNAKDIEFLSGIKTIIVDEFSIGGIGVHASLIKDFLSKANLQKAKEFLGRD
                     YSIKGKMIKGQGLGSKELFATINLDCKGYFLPQNGVYATLLKSQRKIYKSVSFLGIRS
                     SDENFAIESHILEELGEKFTQGEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQAKE
                     LLRKNDER"
     gene            1954..2664
                     /gene="cmoA"
                     /locus_tag="RJ336_000542"
     CDS             1954..2664
                     /gene="cmoA"
                     /locus_tag="RJ336_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HDZ5213010.1"
                     /translation="MMKDELFKQSPKKQFEFDKSVASVFDDMINRSVPFYRENLELCG
                     NLLAKILPINASICDLGCSSANFLIFLANLRKDFKLFGVDNSASMVEVAKSKAKAYGL
                     DISFFETNLCEFDFFVCDVFVANYTMQFIRPPKRQELLDKIYKNLNSKGILIMSEKIL
                     YEDAFLSKNIIELYADYKEKQGYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKK
                     IESIFKWANFETFIAFKD"
     gene            complement(2654..2875)
                     /locus_tag="RJ336_000543"
     CDS             complement(2654..2875)
                     /locus_tag="RJ336_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDZ5213011.1"
                     /translation="MTMKITLFLSLIGIFFAACEQTKSVEYYQNHPEEAKKRSLECRH
                     KAIISQDCVNAYRVGFPKDEWEDENISNP"
     gene            complement(2866..3306)
                     /locus_tag="RJ336_000544"
     CDS             complement(2866..3306)
                     /locus_tag="RJ336_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDZ5213012.1"
                     /translation="MRRLSILLTILIVINITACDSKTENYYKNHPSEAKEKAKECKES
                     GTLSEDCINALKVGVKPTNEESKYSPNTPKKSDNQILEALKQNDLKKEKTTKDINQSS
                     ENNESIIIPPITETPSEIYPSKTTENNQSSIFSDDVNITQEKLP"
     gene            complement(3365..3997)
                     /locus_tag="RJ336_000545"
     CDS             complement(3365..3997)
                     /locus_tag="RJ336_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HDZ5213013.1"
                     /translation="MEINALTITTLYIIGISAEGMTGALAAGRHKMDLFGVIFIALVT
                     AIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVATKIPRVVTKLETLFLTLDAIGL
                     VVFSILGAQIAIDQNHGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII
                     AGAIYYSLIIWLELNALVCTLLTLFIGVFARLLAIKYQWSLPIFSYNEEK"
     gene            complement(4008..4658)
                     /locus_tag="RJ336_000546"
     CDS             complement(4008..4658)
                     /locus_tag="RJ336_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HDZ5213014.1"
                     /translation="MKIFIFLLAISLNIFALESYKPSADFSSYFNNINCSQILDKFFY
                     LNCYDYKLKGTKAVAYKVEASNLKDKQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYTR
                     GHTAPNASFSFSKAAQNSVFLMSNITPQIAQINNKIWNEIEQRERNLAFKFQSIEVLN
                     LVLYDKEPLYIKNRIAIPSFYVKIIKTPKFKECYQVPNHEVNDENIKQYQINCDKF"
     gene            complement(4655..5281)
                     /gene="nth"
                     /locus_tag="RJ336_000547"
     CDS             complement(4655..5281)
                     /gene="nth"
                     /locus_tag="RJ336_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDZ5213015.1"
                     /translation="MKRNLEIKELFLKHFDKPVTELKFSNLYELLVCVMLSAQCTDKR
                     VNLITPDLFKAYPDIKSLANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEI
                     PLEEEKLKSLAGVGQKTAHVVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEED
                     LTGIFKDNLNYLHQAMVLFGRYTCKAKKPLCKECFLNHLCKSKDKELK"
     gene            5362..6183
                     /gene="peb4"
                     /locus_tag="RJ336_000548"
     CDS             5362..6183
                     /gene="peb4"
                     /locus_tag="RJ336_000548"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PEB4"
                     /protein_id="HDZ5213016.1"
                     /translation="MKKFSLVAAALIAGVALNVNAATVATVNGKSISDTEVSEFFAPM
                     LRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPLYTKELDRAKDAILVNVY
                     QEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGSKGK
                     ELDAKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTN
                     FGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK"
     gene            6183..7247
                     /gene="fbaA"
                     /locus_tag="RJ336_000549"
     CDS             6183..7247
                     /gene="fbaA"
                     /locus_tag="RJ336_000549"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HDZ5213017.1"
                     /translation="MGVLDIVKAGVISGDELNKVYDYAKAEGFAIPAVNVVGTDSINA
                     VLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYGVPVILH
                     TDHAARKLLPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKFD
                     ALGVALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFLIAASFG
                     NVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGSGSELKDIKDAVSY
                     GVIKMNIDTDTQWAFWDGVREYELKNRAYLQGQIGNPEGDDKPNKKYYDPRVWLRSGE
                     ESMVKRLEIAFEDLNCINKN"
     gene            7342..8784
                     /locus_tag="RJ336_000550"
     CDS             7342..8784
                     /locus_tag="RJ336_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDZ5213018.1"
                     /translation="MDIKSDEISELVLPEGKDARGSLVYFKIIFIPAFLYILILLGYF
                     NVIDFKVELHTVIMTGVIFFTALIFARHSAEYAYSIFEQQKDEFKQALKRHIMRHFLA
                     IGKDTKSNANFDDFAYTYIKGARNENFASIGSAIFPMMGILGTFISIAFSMPNFSSSD
                     TAALEQEIADLLSGVGTAFYVSIYGIFLALWWMFFEKYGKSKIDRLLNRQKNATSGFF
                     WTKEELDQRYLTESLQHFEKIGAIFKQVSNDDFFAELDHAIDRKFGIFQDMLNVEEKA
                     IRLSSEHIKQTMGELSKAQRDQRDLGKLYSEMLNGIGLLNQNLKEINTRMSEQYNRLL
                     DISSDKIHHLDKTLSAFDEKVERFGKNFELYEKAMLESQEKVFEGFKASLFEGMHKFK
                     EVYEEEKSIDAKIKMMDELKKEMKALDEETSQMMSKLSGDENQNKENETKQIEDFSES
                     KTEENQDEIQAEISKQESNDELKNEDKENK"
     gene            8781..9734
                     /locus_tag="RJ336_000551"
     CDS             8781..9734
                     /locus_tag="RJ336_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDZ5213019.1"
                     /translation="MKNESKEDSNFWIAYADLMAGLLFVFILLIGAIVVKYVLTQSDL
                     KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITN
                     YKQLSKDLNLTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLS
                     KELQSKLDNNITIDEKTGSISLPAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDP
                     KIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS
                     FSDPVFVNGVEDKDKSRRIEIKFSIKNDNALKDVEKFFEFH"
     gene            9721..10596
                     /locus_tag="RJ336_000552"
     CDS             9721..10596
                     /locus_tag="RJ336_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-aminocyclopropane-1-carboxylate
                     deaminase/D-cysteine desulfhydrase"
                     /protein_id="HDZ5213020.1"
                     /translation="MNFIKTISPIQKINFNGFEFYIKRDDLLGEINGNKARKLAFYIH
                     QRYPKNQSFISYGGSQSNALAALSIFAKQRSYKLVFACEKISTFLKNNPCGNYALALE
                     NGVDFVENIHSLSLKQFAFSLCKKDDIFIEQGIANLEAQYGYMELAQEIQMQSQSLKL
                     DFDIFLPSGTGTSAAFLAKYSKFKVFTCACVGDIKYLKKQILTLDPSYDFSNLEFLTS
                     DKKYHFAKPYKEFYELYMDLKLKCNIEFDLLYDILGLSIALKQEWKKPLLYIHQGGIL
                     GNSTMLERYKFKKLV"
     gene            complement(10588..11931)
                     /locus_tag="RJ336_000553"
     CDS             complement(10588..11931)
                     /locus_tag="RJ336_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDZ5213021.1"
                     /translation="MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLV
                     FCIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQSIGYMGLLGSFGIMAYYMVLGG
                     WVLVYIWELTLGNFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIINYIILKRG
                     IIDGIEKSVKFLMPLLFICLIIVVGRNLTLDGAMAGVKFYLEPDFSKILSPKLLIDVL
                     GQVFFALSLGFGVMITLSSHLNKNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGL
                     APDSGPSLVFETLPIAFSHIHFGTIVCILFFVLLLIAALTTSLPIYQVIISVLEEKFK
                     YSKNLSINLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAF
                     FCCIYVGWILGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN"
     gene            complement(11982..12650)
                     /locus_tag="RJ336_000554"
     CDS             complement(11982..12650)
                     /locus_tag="RJ336_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDZ5213022.1"
                     /translation="MKIQSLQIGKIKNYKNFQSAFIKDTYLEETQIDFLGILDDQIAD
                     KIHHGGYHKAIFANSCQNYPIWERFLNKKLNFGSMGENLSIDGLCEQNVCIGDIHQIS
                     NAILQVSEPRKPCVKISKIHNNSNFTHEIFKTGLSGWYYKVLQVGQIRKYENIKILEK
                     NSTSLSVFELNQLFYSPHQALRQNPILLDKLEKLNSLISQNWHETIHKRLKNTYDISY
                     MDSL"
     gene            complement(12647..14350)
                     /locus_tag="RJ336_000555"
     CDS             complement(12647..14350)
                     /locus_tag="RJ336_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDZ5213023.1"
                     /translation="MRIFGIILLSFCLCFASILSLNEAFNVKSNSYNNSISIDIELGK
                     DIYLYSNKLKLYINEKDISSLINLPQSSTRGNENVYYQKLNLALPNLLLEHFAKNTTN
                     LIKLEFQGCSEQGLCYNPQTWYFDLISKKDAFEISKPYKTQKTDKKTKIESEESSIAN
                     FLATDNFFWILLSFFGYGLLLSLTPCILPMIPILSSLIVAKSNAKFSKKYSFFLSFIY
                     VFFMSLAYAIAGVIASFLGASIQGILQKPIILILFALIFIAFAFAMFGAFRFELPLRF
                     QTFIHKKSEKGKGVLGIAIMGFLSALIVGPCVAAPLAGALIYIANTGNALLGGSALFI
                     MSFGMGIPLLFIGLGLGFIKPGFWMEKVKIFFGFVMLAMAIWILSRIIEENYILIAYG
                     ILGVFFSVFMGIFEKSFTIISKIKKSILILILAYSLSIFLGGLFGAKNFLNPLNFNTI
                     SASKSALSYDYINNFEQLKQEIQTNTKPIMLDFTASWCENCKLLDELTFSDERIIQKM
                     QNYKLIKVDVSENNNEQIKTMKEFNVFGPPVLIFFENGKEKLKITGFISADDLLKKLE
                     P"
     gene            14445..15326
                     /gene="ppk2"
                     /locus_tag="RJ336_000556"
     CDS             14445..15326
                     /gene="ppk2"
                     /locus_tag="RJ336_000556"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HDZ5213024.1"
                     /translation="MQENNSPKTQAVVKKNEIYVSVKRKKSTIEYEKDLKNLQIELLK
                     FQNHVKAKGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQWYF
                     QRYIAHLPSAGEIVIFDRSWYNRAGVEPVMGFCTPQQHKDFLREVPLFENMISNSDII
                     FFKFYFSVSKDEQKKRFEKRRSDPLKQYKLSPVDQKSQELWDKYTLAKYSMLLASNTP
                     TCPWTIISSDDKKKARLNLLRFILSKVEYPNKKTGDFSKIDAKLVRSGEEEIRKMEAN
                     LEKLDSKKADEKIKDLD"
     gene            15335..16525
                     /locus_tag="RJ336_000557"
     CDS             15335..16525
                     /locus_tag="RJ336_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDZ5213025.1"
                     /translation="MQKLVENLALKYYDKVVDLRHQIHMHPELEFEEENTAHLVCKIL
                     DEFGIKYQKNIAKTGILATIEGKKKSQKKPKCVLLRADMDALPVQEKTNLSYASKIDG
                     KMHACGHDGHTAGLLGAALILNELKDEFCGTIKFMFQPAEEGSGGAKPMIESGVLENP
                     YVDAVFGCHLWGSLLENTAQIVSGEMMAGTDIFDLEFIGRGGHGAHPHTCIDPIIMAT
                     QFVNNIQSVVSRRLAPYEAGVITVGQICAGTTYNVIPTNAYLKGTVRFLNDKTQDILK
                     SSLEEVAAATAKSNGGDYKLKYTKEFPPLINDEKAALIARKAFAKVLGEENIIVSSKP
                     DMGAEDFAFLTRERMGAYVFVGISKDLNHPALHHSSTFCWDDENLKVLMQGDVMMALE
                     FLNL"
     gene            16604..17776
                     /locus_tag="RJ336_000558"
     CDS             16604..17776
                     /locus_tag="RJ336_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDZ5213026.1"
                     /translation="MKKKIVLIILIAILGSVGAYFIFFNNDEKISYLTQKIQKKDISQ
                     TIEAVGKVYAKDQVDVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDITKA
                     QLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELN
                     AQVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVDEGQTVNANQNTPTIVRIANLDE
                     MEVRMEIAEADVSKIKVGTELDFSLLNDPQKTYHAKIASIDPADTEVSDSSTSSSSSS
                     SSSSSSSSSNAIYYYAKFYVPNKDDFLRIGMSIQNEIVVASAKAVLAVPTYAIKSDPK
                     GYYVEILENQKAVKKYVKLGIKDSINTQILEGVNENEELIVSSSADGLAPKVKLRF"
     gene            17776..19701
                     /locus_tag="RJ336_000559"
     CDS             17776..19701
                     /locus_tag="RJ336_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ5213027.1"
                     /translation="MIFLKNICKNIGENAILKNVSLSIEKGEFVAIIGQSGSGKTSLL
                     NIIGTLDTPSSGTYIFDEYEVTKLNNDEKARLRREKIGFIFQRYNLLSLLSAKENVSL
                     PAVYAGKKLQERSQNAKKLLNDLELAHKLDSKPNELSGGQQQRVSIARALMNGGELIL
                     ADEPTGALDSKSGIMVLEILQKLNAQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDT
                     KKEKAQEKLTLKTMSKEKKTLTLLKNQAFECFKIAYSSILAHKLRSVLTMLGIIIGIA
                     SVVCVVALGLGSQAKVLESIARLGTNTIEIRPGRGFGDLRSGKTRLNFSDLETLRSLE
                     YLEAVDAHSNTSGVATYTNISLSARAEGVGVNNFAIEGLRIDAGRILNNDDVKNSTNV
                     AVLDFNAKKNLFPDEKSENILGRVVLFNSQPFKIIGVLQKDTDKPIEDNVVRLYIPYT
                     TLMNKLTGDRNLREIIVKVKDDVSSTLAENAIIRILEIKRGQKDFFTFNSDTFKQAIT
                     ANKRTTTILTACVAVIALIVGGIGVMNIMLVSVSERTREIGIRMAIGARREDIMMQFL
                     IEAVMICTIGAILGVILSIFVIFAFNTLSTDFPMILNAYSVLLGLLSSMFIGVVFGFF
                     PARNAANLNPISALSKE"
     gene            19703..21073
                     /locus_tag="RJ336_000560"
     CDS             19703..21073
                     /locus_tag="RJ336_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDZ5213028.1"
                     /translation="MKIILSIFLAFFLSACGVKLSLPKEVDLTQEQMKDLNLTYDWYK
                     SYDNAKLNEFLNFVLLNNSDINIARKTLLSALARADLIDYDLYPTLSGNLGFGGDKDL
                     NSGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAYDLENLKISMINTALNDV
                     FELAYFNDVDKLLRAYLSNLEQMKELYSYKYKLGKIEELDLLNIEQSLLRAKQNLLSN
                     DQNRNLLIKNLQDLLAKQEGFVYIEYFKTLSLNDFKTLSPDFNIPLKALAYRADVRSK
                     LNSLKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKFEILSGNVKISLPFLDYG
                     RVKQNIKISQFTYEQLLISYEQALQSAMNEFALNYKDYQSDTLLLQNLQNINIKQELI
                     TKAYYEKYILGKSELKDYLDANNTLNSTQQEFLRARFNLLKTINSYYQITALSFNDEN
                     LEFLKY"
     gene            complement(21076..22254)
                     /locus_tag="RJ336_000561"
     CDS             complement(21076..22254)
                     /locus_tag="RJ336_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HDZ5213029.1"
                     /translation="MLVNKFKIILLFFIIFTSSYAQNLNTNDTIDSILNQNKNHSALT
                     SYVLKKDLKNLEKKLEKNQNIGIRIYGDSHMAADFFPRVIRGYLIRSNSIGFAYPLQP
                     KYQQNLNLVYSYKNFEILNSRNPANAGHNFPLGGIIAKAKTKGAKINLDTTLDKKNFK
                     IGFLFKAKQNTNAFSIKDAKNQSYELRTTQINKWSYKELELDLPLQISALQKDAELGG
                     YFITNKDNNVFLDTIAINGAKSDLWLSWNQTVVKKELGLLHNDLIILAYGSNDALFKG
                     FEKQKFKNNLKKWISILKTYNKNAVIMLISPPTVVQKQGKNYKLAPDFFTIRKALYEV
                     AKEEKTLIFDMHQFMQDSGGKNKWIEQKLSLNDVHLTIKGYELMAKKLLEDLKNIIDY
                     "
     gene            complement(22241..23251)
                     /locus_tag="RJ336_000562"
     CDS             complement(22241..23251)
                     /locus_tag="RJ336_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HDZ5213030.1"
                     /translation="MSVVRFFFILIMVLGLVVVVMNQSISSYIEQKYHFAFYPHNDLL
                     KEANGFKIKLEQIRAILSNEPLPQTNEETTNQESKSTDENLSKIDKVLNTLENDENTS
                     HKETNLTLIQDANISFIDNTKLELQNGDEFLFIGDSLMQGVAIALNRDLRNLNLKVTD
                     LSKQNTGLSYKSYFDWSKATNEAFIKNSNIKYLVVLLGANDPWDIKKGGNYHRFGSPS
                     WIDIYTSRVDEIIKIAKKHKAKVFWFEIPPVKKEDLNKKIQVLNKIYSDEILKNKEIF
                     INTKLFFSVNDEYSAYIKDENNRSIKVRTDDGVHFTPSGAREMSKLLLEHIKLKEENA
                     SK"
     gene            complement(23252..>24501)
                     /locus_tag="RJ336_000563"
     CDS             complement(23252..>24501)
                     /locus_tag="RJ336_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HDZ5213031.1"
                     /translation="INPYFALVLFIYTFFIHYFALLIFVRRKRYIFATCMAFIILNLC
                     FFKYFPSIKGSVDEILNFFGLEFLNIDLVLPIGISFYTFTSITYLVEVYQKRRLESFL
                     NLATFLSFFPTLLSGPIMRSSFFFEQAYQKREFKHANLIIILLVFGIVKKVLIANYLG
                     IYAKSILDFPQSYNFIQLLSAIYAYAIQIYCDFSGYVDLVCAFALMLGFTLPPNFNMP
                     YLAKNLKDFWARWHISLSTFIRDYIYIPLGGNRKGIPRTVANILIAFILSGMWHGNTL
                     AFIVWGLLHGIGIVFIHLLALSKFSLQKIPALGRFLTFQFVCFTWIFFYYSKNLEDAI
                     EYFKACYYNFFQIPSYNDIYMLVAFGVLFMIYPLFINFKEYCIKILNLTPFLLKPFII
                     AFILLLVFAFMPDGIPDFIYSSF"
BASE COUNT         8905 a         3125 c         4135 g         8336 t
ORIGIN      
        1 ttagggtttt aaattttatt tttgattttt ttaatttttt tatgttttgt tctcttttgg
       61 cttttgtttt taattttgtt ttgaaaataa agataaaaat aattgtttta tttttgtgtt
      121 ttatcatggt tttaggaagt tattttttaa aagagcaaag aaataatgcc ttaaaatccg
      181 aacaagaaca aatactttta tggatgaata attttgattt tttaaaagat aataacttaa
      241 gtttaattca aaaagaaaaa gatctttttg aaaaagatct taaagatctt agagaaattt
      301 ttaaaaaaaa tgcttttgaa ataggcattt ggtggttttc taaagaaaaa gaagacttgg
      361 aaaaaagaat aaatgagagt ttaaaatgag atttgatttt tttgtttcaa agcgtttaaa
      421 tatcagtaga aataaagctt tagagcttat agaaaatgaa gaggttttgc ttaatggtaa
      481 aagttttaaa gcttcttttg atgtgaaaaa ttttttagaa aatttaaaaa aaacgcaaga
      541 tttaaatcct gaagatatac ttttaactga tgggttaaaa ttggatcttt taagtgaaat
      601 ttatgtttca agggcggctt taaaattaaa aaatttttta gaagaaaatg atattgaaat
      661 aaaacataaa aattgtcttg atataggatc tagtacgggt ggttttgtgc aaattttact
      721 tgaaaatcag gctttaaaaa tcactgctct tgatgtaggt aacaatcaac tccatctaag
      781 tttaagaaca aatgaaaaaa ttatcttgca tgaaaataca gatctcagag cctttaaaag
      841 tgaagaaaaa tttgaactta ttacttgtga tgtgagtttt atttctctta ttaatttact
      901 ttattatatc gataatttag ctttaaagga aattatctta ctttttaagc ctcagtttga
      961 agtagggaaa aatatcaaaa gagataaaaa gggtgtttta aaagatgata aggcaatctt
     1021 aaaggcaaga atggattttg aaaaagaatg tgctaaattg ggttggcttt taaaaaatac
     1081 gcaaaaatca agcattaaag gaaaggaagg taatgttgaa tatttttact actatatcaa
     1141 aaattaatat tacttcttta gccataggtt gttttgatgg tatgcattta ggacatctaa
     1201 agcttgtaaa atgtttagat gagaatgggg ctttgttagt tattaataaa tttaagggtc
     1261 aatttctttg ttcaaatcgt caaaaagaag aaatttcagg aaaaaaagtt atagaagtgg
     1321 attttgaaag tataaaatct ttagatggta aagatttttt aagctttttg aaaaaagaat
     1381 ttgtcaattt gaaatttata gtagtgggat atgatttttc tttcgggaaa aatagggctt
     1441 ataatgctaa agatattgag tttttaagtg ggataaaaac tataatagtt gatgaattta
     1501 gcataggcgg aataggtgtt catgcaagtt taattaagga ttttttatca aaagcaaatt
     1561 tgcaaaaagc aaaagaattt ttaggaagag attatagtat caaagggaag atgattaaag
     1621 gacaaggttt gggctctaaa gaactttttg cgactataaa tttagattgt aaaggttatt
     1681 ttttacctca aaatggtgtt tatgctactt tgttaaaaag tcaaagaaaa atttataaaa
     1741 gtgtgagttt tttaggtata aggtcaagcg atgaaaattt tgctatagaa agtcatattt
     1801 tagaagaatt gggtgaaaaa ttcacacaag gggagttttt cgaactcgag tttatatctt
     1861 ttctaagaga gaatcaaaaa tttcaagatc taaaaaaact taaaaatcaa attgccaaag
     1921 acatagagca agctaaagaa ttattaagga aaaatgatga aagatgaact ttttaaacaa
     1981 agccctaaaa aacaatttga atttgataaa agcgtggcta gtgtttttga tgatatgatc
     2041 aatcgttctg tgccatttta tagagaaaat ttagaacttt gtggcaattt attggctaaa
     2101 attttaccta taaacgcaag tatttgtgat ttgggctgct caagtgctaa ttttttgatt
     2161 tttttggcaa atctaagaaa ggattttaaa ctttttggcg tggataattc tgcttctatg
     2221 gttgaagttg caaagtcaaa agctaaagct tatgggcttg atataagttt ttttgaaact
     2281 aatttatgtg aatttgattt ttttgtttgc gatgtttttg tggcaaatta taccatgcag
     2341 tttattcgcc ctcctaaaag acaagaatta cttgataaaa tttataaaaa tttaaactct
     2401 aaaggcattt tgattatgag tgaaaaaatc ctttatgaag atgctttttt gtctaaaaat
     2461 atcatagaac tttatgcaga ttataaagaa aaacaaggtt attctaaatt tgaaattgca
     2521 gccaaaagag aagctttaga aaatgtttta attccttata gtcaaaaaga aaatttaaac
     2581 atgctagaaa aggcaggttt taagaaaata gaaagtattt ttaaatgggc aaattttgaa
     2641 actttcatag cttttaagga ttagaaatat tttcatcttc ccattcatct tttggaaaac
     2701 ctaccctata cgcattaaca caatcttgac tgatgatagc tttgtgtctg cattctaaac
     2761 ttcttttttt tgcttcttcg gggtgatttt gataatattc tacacttttg gtttgttcgc
     2821 atgctgcaaa aaatatacca ataaggctta aaaaaagagt tattttcatg gtaatttttc
     2881 ctgtgttata ttaacatcat cgctaaagat agaactttga ttgttttctg ttgttttgga
     2941 aggataaatt tcagaaggtg tttctgttat aggtggtatt ataatacttt cattattttc
     3001 tgaactttgg ttaatatctt ttgtggtttt ttcttttttt aaatcatttt gttttaaagc
     3061 ttctaatatc tgattatcag atttttttgg tgtgtttgga ctgtatttac tctcttcatt
     3121 tgttggctta acaccaactt ttaatgcatt aatacaatct tcgctaagag ttccgctttc
     3181 tttgcattct ttcgcttttt cttttgcttc actaggatga tttttgtagt aattttctgt
     3241 tttgctatcg caagctgtta tattaataac tattaaaatc gtaagtaaaa tacttagtct
     3301 tcgcatttat caatctccta aaatttttta atatcttagc aaacttgtat aaagcaacga
     3361 taaattattt ttcttcattg taagaaaaaa taggtaaaga ccattgatat ttgatagcta
     3421 aaagccttgc aaaaactcct ataaaaagag ttaaaagtgt gcaaactaga gcattaagct
     3481 caagccaaat tattagagaa taatagattg ctcctgcaat tatggcaatt cctgcataaa
     3541 tttctttttg aaacaccaag gggattctca tacataaaat atctcttaaa attccaccaa
     3601 aaacaccggt gattacagca gcagcaacgg ctatgataaa gccatggttt tgatctatgg
     3661 ctatttgagc tccaagtatg ctaaaaacaa caagtcctat agcatcaaga gttagaaata
     3721 aagtttcaag tttggttact acgcgcggaa tttttgtggc tacaagggcg caaaaacaga
     3781 ttaaaataat atattcagga tgtttaaccc aagttaaagg ataatgtcct aaaagcacat
     3841 ctcttatgct tccgcctcca attgctgtta cgagagcaat aaaaataact ccaaaaagat
     3901 ccattttatg gcgtcctgca gctaaagccc ctgtcattcc ttctgcggaa atacctatga
     3961 tataaagagt ggttatcgta agagcattta tctccataat ttatacctta aaatttatca
     4021 caatttattt gatactgttt aatattttca tcatttactt catggtttgg tacttgatag
     4081 cattctttaa atttcggagt tttaataatt tttacataaa aacttggtat agcaatacgg
     4141 tttttaatgt atagtggttc tttatcgtaa agtactaaat ttaaaacttc gatactttga
     4201 aatttgaaag ccaaatttct ttctctttgc tcgatttcat tccaaatttt attatttatt
     4261 tgtgcaattt gtggggtaat attgctcatt aaaaatactg aattttgagc agctttacta
     4321 aagctaaaag aagcattagg cgcagtgtgt cctcgtgtgt aaccactgtt tttataatca
     4381 ctccaagtag tgcggtattt tttaggaata tttgtatcat cttcaaagcg agggcgtttt
     4441 ttgatttgtt tatcttttaa atttgaagct tctactttat aagcaacggc ttttgtgcct
     4501 ttgagtttat aatcatagca atttagataa aaaaacttat ctaagatttg cgagcaattt
     4561 atattgttaa aataagaaga aaaatcagca ctaggtttgt aagattctaa ggcaaaaata
     4621 ttaagagata tagcgagtaa aaagatgaaa attttcattt aagttcctta tctttacttt
     4681 tgcaaagatg atttaaaaaa cattctttac ataaaggttt tttagcttta caggtgtagc
     4741 gtccaaaaag aaccatggct tgatgaagat agttaagatt gtctttaaat atgcctgtta
     4801 aatcttcttc tgtagcttct ggagtttttg ctttgctaag tcctaagcgg tgagaaactc
     4861 taaaaacatg agtatctaca gccatgaaat ttgctccgca ccattctatt aaaactacat
     4921 gagcggtttt ttgtcctacg cctgccaagg attttaattt ctcttcttca aggggaattt
     4981 ctccgtcaaa attttcacaa actgcttttg ccatttttat aagattttgt gctttattat
     5041 taaaaaatga acaagtttgt atataggttt taagacttga taaatttgca tttgcaaggg
     5101 atttgatatc aggataagct ttaaaaagat caggagtgat gaggttaact cttttatcag
     5161 tgcattgggc tgaaagcatc acgcagacta aaagctcata taaatttgaa aatttaagct
     5221 ctgttacagg cttgtcaaaa tgttttaaaa aaagttcttt gatttctaaa tttcttttca
     5281 ttttttaatt ttagttaatt agctttaaac caagtttaga tataattgat tttatataca
     5341 ttttattaaa aaggaaacct aatgaaaaaa ttttctttag tcgcagcagc tttgattgca
     5401 ggtgtagctt taaatgtaaa tgcagctaca gtagccactg ttaatggcaa gagcattagt
     5461 gatacagaag taagtgaatt ttttgcccct atgcttagag gacaggattt taaaactttg
     5521 ccggataatc aaaaaaaagc tcttattcag caatatatta tgcaagattt aattttgcaa
     5581 gatgctaaaa aacaaaattt agaaaaagat cctttatata caaaagaact tgatcgtgca
     5641 aaagatgcaa tacttgttaa tgtttatcaa gagaaaattt taaatactat taaaattgat
     5701 gcggctaaag ttaaagcttt ttatgatcaa aataaagaca aatatgtaaa acctgcaaga
     5761 gtgcaagcaa aacatatctt agtagcgaca gaaaaagaag ctaaggatat tattaacgaa
     5821 cttaaaggtt caaaaggtaa agaactagat gctaaattta gcgagcttgc taaagagaaa
     5881 tcaattgatc caggttcaaa aaaccaaggt ggtgagcttg gttggtttga tcaatcaact
     5941 atggtaaagc cttttacaga tgctgctttc gcacttaaaa atggtactat tactacaact
     6001 ccagtaaaaa cgaattttgg ttatcatgta atcttaaaag aaaattcgca ggctaaaggt
     6061 caaatcaaat ttgatgaagt aaaacaaggt attgaaaacg gacttaaatt tgaagaattt
     6121 aaaaaagtta tcaatcaaaa aggccaagat cttttaaata gtgctaaagt ggaatataaa
     6181 taatgggtgt tttagacatt gtaaaagcag gggtgattag cggagatgag cttaataaag
     6241 tttatgacta tgctaaagca gagggttttg ctatccctgc tgttaatgtt gtaggaactg
     6301 attctattaa tgcagtttta gaagctgcaa aaaaagttaa ctctccagtt attatccagt
     6361 tttcaaatgg tggggcaaaa ttttatgcag ggaaaaattg tcctaatgga gaagttttag
     6421 gtgcaattag tggggctaaa catgtgcatt tacttgctaa agcttatggt gtacctgtga
     6481 ttttacacac tgatcatgct gcaagaaaac ttttgccttg gattgatggg cttattgagg
     6541 caaatgcaca atataaaaaa acccatggac aagctttatt tagttctcat atgcttgatc
     6601 ttagcgaaga aagtttagaa gaaaatctta gcacttgtga agtttatctt caaaaatttg
     6661 atgctttagg tgtcgcgctt gaaatagaac taggttgtac aggtggcgaa gaagatggag
     6721 tggataatac aggtattgat aattccaagc tttataccca accagaagat gtagcacttg
     6781 catatgaaag acttggaaaa attagtgata aatttttaat tgcagcaagt tttggaaatg
     6841 tacatggagt ttacaagcca ggaaatgtta gtttacaacc tgaaatttta aaaaattcgc
     6901 aaaaatttgt aaaagataaa tttgctttaa atagcgataa gcctataaat tttgtatttc
     6961 atggtggtag cggtagcgag ctaaaagata ttaaagatgc agtaagctat ggcgtaatta
     7021 agatgaatat tgacacagat acccagtggg ctttttggga tggggtgcgt gaatatgaac
     7081 ttaaaaatag ggcttatttg caaggacaaa ttggaaatcc agaaggtgat gacaagccaa
     7141 ataaaaaata ctatgatccg cgtgtttggt taagaagcgg tgaagaaagt atggtaaagc
     7201 gtcttgaaat tgcttttgaa gatttaaact gtataaacaa aaactaagca ttttaaaggc
     7261 ttagttttat tttgttttaa aaatttttat caaattgagt agcaatcttt aaaataaaat
     7321 ttttaatgag gtattggttt catggatatt aaatcagatg aaatttcaga acttgttttg
     7381 cctgaaggca aagacgcaag aggttctttg gtttatttta aaattatttt tattccagct
     7441 tttctttata ttttgatttt attgggttat tttaatgtaa ttgactttaa ggttgaattg
     7501 catacggtta ttatgacagg tgtgattttt tttacagcat tgatttttgc tagacatagt
     7561 gctgagtatg cgtatagtat ttttgaacaa caaaaagatg aatttaaaca ggctttaaaa
     7621 agacatatta tgaggcattt tcttgccata gggaaagaca cgaaatcaaa tgccaatttt
     7681 gatgactttg cttatacata tattaaaggt gcaagaaatg agaattttgc tagtataggt
     7741 tcggcaattt ttccaatgat gggaatttta ggaactttta tcagcatagc tttttcaatg
     7801 ccaaatttta gctctagtga tacagccgct ttagaacaag aaattgcaga tttgttaagc
     7861 ggagtaggaa ctgcttttta tgtttcaatt tatggaattt ttcttgcatt atggtggatg
     7921 ttttttgaaa aatatggtaa aagtaaaata gatcgtttgt taaatcgtca aaaaaacgct
     7981 acaagtggat ttttttggac aaaagaagag cttgatcaaa gatatttaac cgagagtttg
     8041 caacattttg aaaaaattgg agcaattttt aaacaagtta gtaatgatga tttttttgca
     8101 gagcttgatc atgctattga tagaaaattt ggtattttcc aagatatgct aaatgtagaa
     8161 gaaaaggcta ttagattaag tagtgaacac atcaaacaaa ccatgggtga gcttagtaaa
     8221 gcacaaagag atcaacgcga tcttggaaag ctttatagtg aaatgttaaa tggtataggt
     8281 ttactcaatc aaaatttaaa agaaatcaat acaagaatgt cagaacaata taatcgcttg
     8341 ctcgatatca gtagtgataa aattcatcat cttgataaga cgctaagtgc attcgatgaa
     8401 aaagtagagc gttttggtaa aaattttgaa ctttatgaaa aagcaatgtt ggaaagtcaa
     8461 gaaaaggttt ttgaaggatt taaagcaagc ttgtttgaag gtatgcataa atttaaagaa
     8521 gtatatgaag aagaaaaaag tatcgatgct aaaatcaaaa tgatggatga gcttaaaaaa
     8581 gaaatgaaag cacttgatga agaaacaagt caaatgatga gcaagctttc tggagatgaa
     8641 aatcagaata aagaaaatga aaccaaacaa atagaagatt tttcagagtc taagactgaa
     8701 gaaaatcaag atgaaattca agcagaaata tctaagcaag aaagcaatga tgagctaaaa
     8761 aatgaagata aagaaaataa atgaaaaatg agtcaaaaga agatagcaat ttttggatag
     8821 cttatgctga tttaatggca ggattgctgt ttgtttttat tttgctaata ggtgctattg
     8881 ttgtaaaata tgttttaact caaagtgatt taaaagaaat caaagataat ctcaataaac
     8941 aagaggcacg cttagaggag agcaaagaag agcttagaaa taaagaagcc atagtgttta
     9001 aactaagttc tgatttaaac aatgcttcta gtgctttaaa tcttgctaat tctcaaaaag
     9061 cagaattaga ggctaatatt acaaattaca agcagttaag caaagattta aacttaactt
     9121 tagataataa agataagcaa attttgattt tactaggtca actagagaaa aaagatgaag
     9181 agcttaaaaa tttacaagaa gattttcaaa aagctaaaga aaaggtgcaa aatcttggtt
     9241 tgattcgtga aaatttaagc aaggaattac aaagtaagct tgataataat atcactatag
     9301 atgaaaagac aggatctatt tctttgcctg ctgaagtact ttttgataaa gattcttatg
     9361 tgttaaaaaa tgaggcaaag gcaagtttga gaaaaatctt aagcgaatat tttgatgcta
     9421 ttcttgaaga tccaaaaatt ttttccaaca ttgaaaatat cattattgaa ggacatactg
     9481 atagtgatgg atcttatatt tataatttag atttgtcgca aaaaagagct tatgaggtga
     9541 tgaattttat ctatactttt tataagagcg ataaacttca aaagctttta atggcaagtg
     9601 gacgttcttt ttcagatcct gtgtttgtca atggagttga agataaggat aagagtcgtc
     9661 gcatagaaat aaaatttagc attaaaaatg ataatgcttt aaaggatgta gaaaaattct
     9721 ttgaatttca ttaaaacaat tagtcctata caaaaaatca attttaacgg atttgaattt
     9781 tatattaaaa gagatgattt attaggagaa attaatggaa ataaagctag gaaacttgct
     9841 ttttatatcc atcaaagata tcctaaaaat caatctttta taagttatgg aggaagccaa
     9901 agtaatgctt tggcggcatt aagtattttt gctaaacaaa gatcatataa gcttgttttt
     9961 gcttgtgaaa aaatttctac ttttcttaag aataatcctt gtggaaacta tgctttagct
    10021 ttagaaaatg gtgttgattt tgtagaaaat atccattctt tatccttaaa gcaatttgct
    10081 ttttctttgt gtaaaaaaga tgatattttt atagaacaag gcatagctaa tttagaagct
    10141 caatatggct atatggaact tgctcaagaa attcaaatgc aaagtcaaag tttaaagctt
    10201 gattttgata tttttttacc ttcgggtaca ggcacttcgg cagctttttt ggcaaagtat
    10261 tctaaattta aagtatttac ttgcgcttgt gtaggtgata ttaaatatct taaaaaacaa
    10321 attttaacat tagatccaag ctatgatttt tcaaatttag aatttttaac aagtgataaa
    10381 aaatatcact ttgctaagcc gtataaagaa ttttatgagc tttatatgga tttaaagtta
    10441 aagtgcaata tagaatttga cttgttgtat gatattttag gattaagtat agcattaaaa
    10501 caagagtgga aaaaaccatt gctttatata catcaaggtg gaattttagg aaattccact
    10561 atgttagaga gatataaatt taaaaaatta gtttaaaatt ccatagataa aaatgattaa
    10621 aataatcaaa ggtactatat attttacata ataaaaccaa attccaaacc atgaactttt
    10681 aagtgtattg ttattgctaa gttcttttag actttcttgt ttgcctaaga tccaacctac
    10741 gtaaatgcag caaaaaaatg cagttaaaac aaacaaaata tttccactaa tgaaatcaaa
    10801 actatcaaaa atgttttttc ctttgatgat aacaatatca cgccaaggcc cataagttag
    10861 aatacaagga agattaccaa gtatgaagat aaatcctaga gttaggttaa tagaaagatt
    10921 tttagaatat ttaaattttt cttctaatac actaataata acttgataaa ttggtaagct
    10981 tgtggttaaa gctgcaatca agagtaagac aaaaaataaa atacacacaa tggtgccaaa
    11041 atggatatga gaaaatgcta taggtaaagt ttcaaaaacc aaagaaggcc cgctatctgg
    11101 agcaagtccc gctgagaaaa gtgctggaaa aatcataaaa ccagccaaaa cagctatgat
    11161 agtatttaaa acccctgtat aaatagcggt ttttgccata ttttcatttt tattaagatg
    11221 agatgaaagt gttatcatta ccccaaaacc tagggataaa gcaaaaaaga cttgtcctaa
    11281 aacatcgatt aaaagttttg gtgataaaat tttactaaaa tcaggttcaa gataaaattt
    11341 aactccagcc atagctccat caagggttaa attgcgtcct acaacaataa taagacagat
    11401 aaataacaaa ggcattaaaa attttacgga tttttctata ccatctataa tgcctctttt
    11461 taaaataata taattaataa ttacaaaaac agtggtaaaa ataccaactc ctaaaggatt
    11521 gaaggctatt ttgtcgttaa aaaactgatg agtaaattct ttgcttacta cattagcaag
    11581 actaaaattc cctagggtta attcccaaat ataaactaaa acccatcctc caagtaccat
    11641 gtagtaagcc attatgccaa agcttcctaa aagtcccata tatccaatac tttgccattt
    11701 ttgtttgaaa gcatctacgc tatttgtcat cgcttttctg cctatgacat tttcaactaa
    11761 aataacagga atgcctatga taatcatagc tatacaaaaa actaatacat aagcaccgcc
    11821 accattttct cctacaagat agggaaaacg ccaagttgct ccaaatccta tggttgctcc
    11881 agcaactgtt agaatataag ttagtgtgct actccatgtt tgtctttgca tgattatcct
    11941 ttcgaaaaag aattatttta cctaaaaata actttaaaaa cttataagct atccatatag
    12001 cttatatcgt aagtattttt taagcgtttg tgtatcgttt cgtgccaatt ttgagatatg
    12061 agagagttta atttttctaa tttatctaat aaaatcggat tttgtctaag agcttgatgt
    12121 ggggagtaaa aaagttgatt gagttcaaat acactaagtg aagtagaatt tttttctaaa
    12181 attttaatat tttcatactt tcgtatttgt ccaacttgta aaactttata ataccatcca
    12241 ctcaagcccg ttttaaaaat ttcatgtgta aaatttgaat tattgtgaat tttagaaatt
    12301 tttacacaag gttttctagg ttcgcttact tgcagtattg catttgaaat ttgatgtata
    12361 tcacctatgc aaacattttg ttcacaaagc ccatcgatgc tcaaattttc acccattgag
    12421 ccaaaattta gctttttatt aagaaatctt tcccatatag gatagttttg acaagagttg
    12481 gcaaaaatag ccttatggta gcctccatga tgaattttat cagctatttg atcatctaaa
    12541 atacctagaa aatcaatttg tgtttcttct aggtaagtat ctttaataaa tgcgctttgg
    12601 aaatttttat agtttttaat tttccctatt tgcaaacttt gaattttcat ggttctagtt
    12661 tttttaataa atcatcagca ctgataaaac ccgtgatttt taatttttct tttccatttt
    12721 caaagaaaat taaaacaggt gggccaaaaa cattaaattc tttcatggtt ttaatttgtt
    12781 cattattatt ttcgcttaca tcaactttga taagtttgta attttgcatt ttttgtatga
    12841 ttctttcatc gctaaaggtt aattcatcta aaagtttgca attttcacac caagatgcag
    12901 taaaatcaag cattatgggc tttgtatttg tttgtatttc ttgctttaat tgttcaaaat
    12961 tgttaatata atcatagctt aaagcagatt ttgaggcaga tatagtattg aaatttaaag
    13021 gatttaagaa atttttagcc ccaaaaagtc cccctaggaa aatacttaga gaataagcta
    13081 aaataagaat taaaatactt tttttaattt tagaaattat tgtaaaactt ttttcaaaaa
    13141 ttcccataaa aacactaaaa aatacaccta aaattccata ggcaattaaa atgtaatttt
    13201 cttcaataat tctagaaagt atccaaatag ccatagccaa cataacaaaa ccaaagaaaa
    13261 tttttacttt ttccatccaa aaaccaggtt taataaaacc taatcctaag cctatgaaaa
    13321 gcaaaggtat acccatgcca aaactcatga taaaaagcgc actaccgcct aataaagcat
    13381 tgcctgtatt ggctatataa attaaagcac ctgctaaagg agctgctacg caaggaccta
    13441 ctattaaagc agataaaaat cccatgatgg ctatacctaa aactcctttc cctttttcgc
    13501 tttttttatg tataaaggtt tgaaatctta atggcaattc aaaacgaaaa gctccaaaca
    13561 tagcaaaagc aaaagctatg aaaattagag caaaaagaat taaaataata ggtttttgta
    13621 aaattccttg aatacttgct cctagaaaac ttgctataac tccagcaata gcataggcta
    13681 aagacatgaa aaaaacatag ataaaagaga gaaaaaaact atattttttt gaaaatttag
    13741 cattactttt tgctacgata agagaagata aaatcggaat cataggtaaa atacaaggtg
    13801 ttaaggagag taaaagtcca tagccaaaaa aacttagcaa aatccaaaaa aagttatctg
    13861 ttgctaaaaa atttgctata gagctttctt cagattcaat tttagttttt ttatctgttt
    13921 tttgagtttt gtaaggtttt gaaatttcaa aagcatcttt tttagaaatg agatcaaagt
    13981 accaagtttg aggattataa cacaagcctt gttcagaaca accttgaaat tcgagtttga
    14041 ttaaatttgt ggtatttttt gcaaagtgct ctagtaataa atttggcaaa gctaaattta
    14101 atttttgata ataaacattt tcattacctc ttgtagaact ttgaggtaga ttaatcaaag
    14161 aacttatatc tttttcgttt atatataatt taagtttatt agaataaaga taaatatctt
    14221 ttccaagttc aatatcaatt gagatagagt tattataaga gtttgatttt acattaaaag
    14281 cttcatttaa agacaatata gaagcaaaac ataaacaaaa acttaataaa ataataccaa
    14341 aaatacgcat aaatttccta aaaacttatt ttttccttta tttttagctt caattataat
    14401 ttattatggt aaatttgctt taaatacttt ataaaggttt gaaaatgcaa gaaaataatt
    14461 ctccaaaaac gcaagcggtt gttaaaaaga atgaaattta tgtttctgtt aaaagaaaga
    14521 aaagtacaat agaatatgaa aaagatttaa agaatttgca aattgagctt ttgaaatttc
    14581 aaaatcatgt taaagccaag ggtttaaagg ttcttatact tatagaaggg cgtgatgcgg
    14641 ctggaaaagg tggggcgatt aaacgtttga ttgagcattt aaatccgcgt ggttgccgcg
    14701 ttgtggctct tgaaaaacct agtgatgtgg aaaaaacaca gtggtatttt cagcgttata
    14761 tagcacattt gccctcggcc ggtgagattg tgatttttga cagatcttgg tataatcgtg
    14821 caggagtaga accggttatg ggtttttgta caccgcaaca acataaagat tttttaagag
    14881 aagtgccttt gtttgaaaat atgatttcaa atagtgatat tatttttttt aaattttatt
    14941 tttcagtatc aaaagatgag caaaaaaaac gttttgaaaa acgccgaagc gatccgctta
    15001 aacaatataa attatctcct gtggatcaaa aatcgcaaga attatgggat aaatatactt
    15061 tagctaaata ctctatgctt ttagcatcta atactccaac ttgtccttgg actattattt
    15121 cttctgatga taagaaaaaa gcaagattaa atttattgcg ttttatactt tctaaggtag
    15181 aatatccaaa taaaaaaact ggagattttt ccaaaattga tgcaaaatta gtgcgtagtg
    15241 gagaagaaga aatacgaaaa atggaggcga atttggaaaa acttgacagt aaaaaagcag
    15301 atgagaaaat aaaagattta gattaaggaa aagaatgcaa aagctggttg aaaatttagc
    15361 actaaagtac tatgataaag tagttgattt aagacatcaa attcatatgc atcctgagct
    15421 tgaatttgaa gaagaaaata cagctcattt agtgtgtaaa attttagatg agtttggcat
    15481 taaatatcaa aaaaatattg caaaaacagg aattttagct actatagaag gaaaaaagaa
    15541 gagtcagaaa aaaccaaaat gcgttctttt aagagcggat atggatgctt tgcctgtaca
    15601 agaaaaaact aatctaagtt atgcttcaaa aattgatggt aagatgcacg catgtggaca
    15661 tgatggacat acagcaggac ttttgggagc tgctttgata ttaaatgagc tcaaagatga
    15721 attttgtggc acgattaaat ttatgtttca gcccgcagaa gagggaagcg gtggagctaa
    15781 acctatgata gaatcaggtg tattggaaaa tccttatgtt gatgcggttt ttggttgtca
    15841 tttatggggg tctttgcttg aaaatactgc tcaaattgta agtggcgaaa tgatggctgg
    15901 aacggatatt tttgatttgg aatttattgg cagaggagga catggagctc atccgcacac
    15961 ttgtatagat cctataatta tggcaacgca atttgtaaat aatatacaaa gtgttgtttc
    16021 taggcgttta gccccttatg aagcaggggt gattactgta ggtcaaattt gtgcaggaac
    16081 tacttataat gttattccta caaatgctta tttaaaagga accgtgcgtt ttttaaatga
    16141 taaaacacaa gatattttaa aaagttctct agaagaagtg gctgctgcta cagcaaaatc
    16201 taatggtgga gattataagc ttaaatatac taaagaattt cctccattga ttaatgatga
    16261 aaaagctgct ttaatagcaa gaaaagcttt tgcaaaggtc ttaggagaag aaaatatcat
    16321 tgtttcttct aaacctgaca tgggggctga agattttgct tttttaacac gagaaagaat
    16381 gggagcttat gtgtttgttg gaatttcaaa ggatttaaat catccagctt tgcatcatag
    16441 ttctactttt tgttgggatg atgaaaattt aaaagtctta atgcaaggtg atgtgatgat
    16501 ggctttagaa tttttaaatt tataaaatag aattaaaaat tcacaaaaaa ttcacaaaaa
    16561 atgagtaaaa tttaatcttg atttttcttt aggatttgtt attatgaaaa agaagattgt
    16621 tttaatcatt ttaattgcaa tacttggaag tgttggggct tattttattt tttttaataa
    16681 tgatgaaaaa atcagctatt taactcaaaa aatacaaaaa aaagatatat ctcaaaccat
    16741 agaggcagta ggaaaggtat atgccaaaga tcaagtcgat gtaggtgctc aagttagcgg
    16801 acaaattata aaactttatg tggatgtggg aactcatgta aagcaaggtg atttgatcgc
    16861 tcaaattgac aaagataaac aacaaaacga tttagatatt acaaaagctc agcttgaaag
    16921 tgctaaggct aatttagaga gtaaaaaagt tgctcttgag attgcgagta agcagtatca
    16981 aagagagcaa aaactttatg cagctaaagc aagttctctt gaaaatttag aaactcaaaa
    17041 aaataattat tatactttaa aagctaatgt tgcagagctt aatgctcaag tagttcagct
    17101 tgaaatcact cttaaaaatg cacaaaaaga tttaggttat acaaccatta ctgctcctat
    17161 ggatggtgtt gtgattaatg tagctgtaga tgaaggacaa acagttaatg ctaatcaaaa
    17221 cactcctact atagtccgta tagctaattt agacgaaatg gaagtaagaa tggaaatagc
    17281 agaggctgat gtgagtaaga taaaagtagg aacagagctt gatttttctt tacttaatga
    17341 tcctcaaaaa acttatcatg ctaagattgc aagtatagat ccagctgata ctgaagtgag
    17401 tgattctagt acaagctcaa gctcatcaag ttcaagttct tcaagctcaa gctcatcaaa
    17461 tgctatttat tattacgcaa aattttatgt acctaataaa gatgattttt tgcgtattgg
    17521 tatgagcata caaaatgaaa ttgttgtagc aagtgcaaag gctgttttag cagtgccaac
    17581 ttatgcaatt aaaagcgatc caaaaggcta ttatgttgaa attttagaaa atcaaaaagc
    17641 tgttaaaaaa tatgtcaaac ttggcattaa agattctatc aatactcaaa ttttagaagg
    17701 cgtaaatgaa aatgaagaat tgatagtaag ctcaagtgct gatggtttag ctcctaaagt
    17761 gaagttgaga ttttaatgat ttttcttaaa aatatttgca aaaatatagg cgaaaatgcc
    17821 attttaaaaa atgtaagttt aagtatagaa aaaggtgaat ttgttgccat tataggacaa
    17881 agtggaagtg gtaaaacttc acttttaaat atcataggaa cattagatac accaagtagt
    17941 ggaacttata tttttgatga atatgaagtc actaaactta ataatgatga aaaagcaaga
    18001 ttaaggcgtg aaaaaatagg ctttatattt caaagatata atcttttaag cttgcttagc
    18061 gctaaagaaa atgtttcttt acctgcagtt tatgcgggaa aaaaattaca agaaagaagt
    18121 caaaacgcta aaaaactttt aaatgattta gaactagctc ataagttaga ttctaaacca
    18181 aatgaattaa gcggaggaca gcaacaacgc gtttctatag caagagcttt gatgaatggt
    18241 ggagagctta ttttagctga tgagccaacg ggggctttgg atagtaaaag cggcattatg
    18301 gtgcttgaaa ttttacaaaa acttaacgca caaggccata ctatagtctt agtaactcac
    18361 gatccaaaaa ttgcagcaca agctaaaagg gttatagaga ttaaagatgg agaaatttta
    18421 agcgatacta aaaaggaaaa agctcaagaa aaactcactt taaaaacaat gtctaaagag
    18481 aaaaaaacac ttactttgct taaaaatcaa gcctttgagt gttttaagat agcttattct
    18541 tccatacttg cacacaaact tcgttctgtt ttaactatgc ttggaatcat cataggtatt
    18601 gcttctgtag tttgcgttgt agctttagga ttgggttctc aagctaaggt gcttgagtct
    18661 attgcaagac ttggaacaaa tactattgaa attcgtcctg gaaggggttt tggagatttg
    18721 cgttcaggta aaacaaggct taattttagt gatttagaaa cgctaagatc tttagaatat
    18781 ttagaagcag ttgatgctca ttcaaatact tcaggagtgg caacttatac caatatttct
    18841 ttaagtgcaa gagctgaagg agtgggggta aataattttg ctatagaagg tttaaggata
    18901 gatgcgggaa gaattttaaa taatgatgat gtaaaaaata gtaccaatgt tgctgtgcta
    18961 gattttaatg ctaaaaaaaa tctttttcct gatgaaaaaa gtgaaaatat tttaggtcgt
    19021 gtggtgcttt ttaattctca accttttaag attataggag ttttgcaaaa agatacagac
    19081 aagcctatag aagataatgt agtgcgtctt tatataccct atacaacact gatgaataag
    19141 cttacaggag atagaaattt gcgtgaaatc atagttaagg ttaaagatga tgtgagttca
    19201 actttggctg aaaatgctat cataagaatt ttagaaatta aacgcggaca aaaggatttt
    19261 tttactttta attctgacac ctttaagcaa gctattacag caaataaacg cactacaacg
    19321 atacttacag cttgtgtggc tgtgattgct ttgattgttg ggggtatagg agtgatgaat
    19381 atcatgcttg tttctgtaag tgaaagaaca agagaaatag gcatacgcat ggctataggg
    19441 gctagaagag aagatattat gatgcagttt ttaatcgaag cggttatgat ttgtactata
    19501 ggggcgattt taggtgtgat tttatcgatt tttgttattt ttgcttttaa tactttaagt
    19561 actgattttc ctatgatttt aaatgcttat tctgtgcttt tgggactttt aagttctatg
    19621 tttatcggtg tggtttttgg ttttttccct gcaagaaatg cagcaaattt aaatcctatt
    19681 agtgcattat caaaggaatg atatgaaaat aatacttagc atttttttag catttttctt
    19741 gagtgcttgt ggagtaaaac ttagcttgcc taaagaagtt gatttaactc aagaacaaat
    19801 gaaagattta aatctcactt atgattggta taaatcctat gataatgcaa aattaaatga
    19861 atttctaaat tttgttttat tgaataatag tgatattaat atagctagaa aaactttgct
    19921 ttcagctttg gctagagccg atttgattga ttatgattta tatccgactt taagtggaaa
    19981 tttgggtttt ggtggagata aagatttaaa ttcaggcaaa caaagtaaaa atttcaataa
    20041 ttctttaaat ttaagctatg agcttgatat ttatggaaaa ttaagagata gtgcaagtgc
    20101 gagtgaattt agtgcaaaag caagtgctta tgatcttgaa aatttaaaaa taagcatgat
    20161 caatacagct ttaaatgatg tttttgagct ggcttatttt aacgatgtag ataaattgct
    20221 tcgagcttat ctttcaaatt tagaacaaat gaaagagctt tatagttata aatacaagct
    20281 tggaaaaata gaagaattag atcttttaaa catagaacaa agcttattaa gagctaaaca
    20341 aaatttatta agcaatgatc aaaatcgtaa tttactcata aaaaatttac aagatttatt
    20401 ggcaaagcaa gaaggttttg tttacataga gtattttaaa actttatctt taaatgattt
    20461 taaaacctta agtcctgatt ttaatatacc tttaaaagct ttagcgtacc gtgcagatgt
    20521 gagatctaaa ctcaatagct taaaatcagc ctttaaggat tattcttcca tgcaaaaatc
    20581 tattttgcct agtatttctt taggtggagc attaagcgga agtgataaaa aaatcgatga
    20641 tagttttaaa tttgaaattt taagtggcaa tgttaagatt tctttacctt tcttagatta
    20701 tggtagagta aagcaaaata tcaaaatttc acaatttact tatgagcaac ttttaatttc
    20761 ttatgagcaa gccttgcaaa gtgcgatgaa tgaatttgca ttgaattata aagattatca
    20821 aagcgacacc ttgcttttgc aaaatttgca aaatattaac attaaacaag agcttatcac
    20881 taaggcgtat tatgaaaaat atattttagg aaaaagtgaa ttaaaagatt atttggatgc
    20941 aaacaatact ttaaattcta cccagcaaga atttttaaga gctagattta atcttttaaa
    21001 aaccattaat tcttactatc aaatcacagc tttaagtttt aatgatgaaa acttagaatt
    21061 tcttaagtat taaatttaat aatcaatgat attttttaaa tcctcgagta actttttagc
    21121 catcagctca tagcctttta tagtaagatg tacatcattg agcgaaagct tttgttctat
    21181 ccatttgttt tttcccccac tatcttgcat aaactgatgc atatcaaaaa taagagtttt
    21241 ttcttcttta gcaacttcat ataatgcttt gcgtatggta aaaaaatcag gagcaagctt
    21301 gtagttttta ccttgttttt gaactacagt tggtggagag attagcatga taacagcgtt
    21361 tttattgtaa gtttttaaaa tactaatcca tttttttaaa ttatttttga atttttgttt
    21421 ttcaaaccct ttaaagagtg catcattaga accataggca agaataatta aatcattgtg
    21481 taaaagtcct agttcttttt ttacaactgt ttgattccaa gagagccata aatcactttt
    21541 ggcaccattg attgcaatgg tatctaagaa aacattatta tctttatttg tgatgaaata
    21601 tcctcctagc tcagcatctt tttgtaaggc tgaaatttgc aaaggaagat caagttctag
    21661 ttctttataa gaccatttgt taatttgtgt agttcttaac tcatagcttt ggttttttgc
    21721 atctttgatg ctaaaagcat tggtattttg cttggcttta aataaaaatc ctattttgaa
    21781 atttttttta tctagggttg tatcaaggtt gatttttgcg cctttagttt ttgctttggc
    21841 tattatccca cctaatggaa aattatgtcc agcattagca ggatttcttg agtttaaaat
    21901 ttcaaagttt ttataagaat aaacaagatt aagattttgt tgatatttag gctgtaaagg
    21961 ataggcaaaa cctatagagt tagagcggat taaatatcct cttatgacac gcggaaagaa
    22021 atcagccgcc atatgagaat ctccataaat tctaattcct atgttttgat ttttttctaa
    22081 ttttttttct agatttttaa gatctttttt taatacataa cttgttaaag cagagtgatt
    22141 tttgttttga ttgagtatgg aatctattgt gtcatttgta tttaaatttt gtgcataaga
    22201 gctagtaaaa ataataaaaa acaataagat aattttaaat ttatttacta gcattttctt
    22261 ccttaagttt tatgtgttct aataaaagtt tagacatttc tcttgcgcca cttggagtaa
    22321 aatgaacccc atcatctgtt cttactttta tacttctatt gttttcatct tttatataag
    22381 ctgagtattc atcattgaca ctaaaaaata gcttagtgtt gataaaaatt tctttatttt
    22441 taagaatttc atcgctgtaa attttattga gcacttgtat ttttttgttc aaatcttctt
    22501 tttttacagg agggatttca aaccaaaaaa ctttggcttt atgtttttta gcgattttaa
    22561 tgatttcatc tacacgactt gtgtaaatat ctatccaaga aggggagcca aaacgatggt
    22621 aatttcctcc ttttttaata tcccaaggat cattagcgcc aagaagaaca acaagatatt
    22681 taatatttga gtttttaata aaagcttcat tggtggcttt tgaccagtca aaataggatt
    22741 tataagaaag gcctgtattt tgtttactaa gatcggttac cttaagattt aaatttctta
    22801 aatctctatt taaggctatt gcaacacctt gcattaaaga atctccgata aataaaaact
    22861 catctccatt ttgtagctct aatttggtat tgtcgataaa actaatattt gcatcttgga
    22921 ttaaggttag atttgtttct ttatgagaag tgttttcatc attttctaaa gtgtttagaa
    22981 ctttatctat tttacttaag ttttcatctg ttgatttact ttcttgattt gtagtttctt
    23041 cattggtttg aggcaagggt tcgttgctta aaattgcacg aatttgttct aatttaattt
    23101 tgaagccatt ggcttctttt aaaagatcat tatgaggata gaatgcaaaa tgatattttt
    23161 gttctatata agagctaatg ctctgattca taactacaac aaccaagcca agcaccataa
    23221 tcaaaatgaa gaaaaatcta actacactca tctaaaaact cgaataaata aaatcaggaa
    23281 ttccatctgg cataaaagca aaaaccaaaa gtaaaataaa agctatgata aaaggtttta
    23341 gtaaaaatgg agtaagattt aaaatcttaa tgcaatattc tttaaaatta ataaataaag
    23401 gatagatcat aaaaagaacc ccaaaagcaa ccaacatata gatatcgtta taagatggaa
    23461 tttggaagaa attataataa caagctttaa aatattctat tgcatcttct agatttttgc
    23521 tataataaaa gaaaatccaa gtaaaacata caaattgaaa ggttaaaaat cttcctaaag
    23581 ctggaatttt ttgtaaacta aatttgctta aagctagcaa atgtataaaa actatgccaa
    23641 taccatgcaa taaaccccaa acaataaaag caagtgtatt gccatgccac atacctgaaa
    23701 gtataaaagc gatgagtata ttagctacag tgcgtggtat tccttttcta ttgcccccta
    23761 aaggtatata gatataatct cttataaagg ttgaaagact gatatgccat ctagcccaaa
    23821 aatcttttag gttttttgca agataaggca tgttaaagtt aggcggaagg gtaaaaccta
    23881 acattaaagc aaaagcacaa actaaatcaa catatccgct aaaatcgcag tatatttgaa
    23941 ttgcataggc gtaaattgcg cttaaaagtt gtatgaaatt ataagattgt ggaaagtcta
    24001 aaatactttt agcataaatt ccaaggtaat tggctattaa aactttttta actataccaa
    24061 aaacaagcaa gatgatgatt aaatttgcat gtttaaattc gcgtttttga taggcctgtt
    24121 caaagaaaaa agaacttcgc ataatgggcc ctgaaagtag tgttggaaaa aatgataaga
    24181 aggttgctaa atttaaaaaa ctttctaaac ggcgtttttg ataaacttct acaagataag
    24241 taatagaagt aaaggtataa aaactaattc ctattggtaa tactaaatca atatttaaaa
    24301 attctaaacc gaaaaaattt aatatctcat caacacttcc tttgatacta ggaaagtatt
    24361 taaaaaaaca taaatttaaa ataataaaag ccatgcaagt agcgaaaata taacgcttgc
    24421 gacgcacaaa aattagcaag gcaaaatagt gtataaaaaa ggtatatata aataaaacta
    24481 aggcgaaata aggattgatt a
//
LOCUS       DAPWGO010000016        24075 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.017, whole genome shotgun sequence.
ACCESSION   DAPWGO010000016 DAPWGO010000000
VERSION     DAPWGO010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24075)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24075)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24075
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.017"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..740
                     /locus_tag="RJ336_000564"
     CDS             <1..740
                     /locus_tag="RJ336_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HDZ5213032.1"
                     /translation="KFHSFQNFYEDFKSHKFIFNHEHQSIFKKNTSQQITLLHPTRIR
                     RPKFVNSTHALAKIIHSVAHIEFNAINLALDASYRFKNLPLQFYYDWLEVADEEIKHF
                     KLLNSALEELGYKYGDFPVHDNLESALEATKDSLSFRMGIVHRGLEAKGLDANPFVVQ
                     KLQSSNHFIKNLLMEYLEIILNDEIKHVKKGDTWWKFANQNKYDFIELCKTFKQFSLA
                     GKKLNIQARIKAGFTQEECEVIEKFYS"
     gene            complement(731..1459)
                     /gene="pssA"
                     /locus_tag="RJ336_000565"
     CDS             complement(731..1459)
                     /gene="pssA"
                     /locus_tag="RJ336_000565"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDZ5213033.1"
                     /translation="MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYTALIYIIL
                     SLICDGLDGRVARLTNSTSKFGVEFDSLADLVAFGVAPAVLFYMAIGYDFGKLGSLIT
                     AFFVVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSAIWTYAFISYDFLKPYGVVF
                     LVLQAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASL
                     YVLYGIIRVLYTIIVSKFKIRNQE"
     gene            complement(1469..2086)
                     /locus_tag="RJ336_000566"
     CDS             complement(1469..2086)
                     /locus_tag="RJ336_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDZ5213034.1"
                     /translation="MKDFIAKDGYLSLIILSLIFIFVWIFYSFSILLLALIVICIFLF
                     RAPKRELVCSDEKAIFAPMDGRVTKIENIHHKDLGECVEITIKNALYDAGNFNTPFAM
                     SIIDIRLRHGLFLCSELKSAKMMNERAFILAKVKENKTIALRIYAGSFDRKLKLDNIS
                     HDLKAGDRMGFLINGSISLLLPKDTRIHIGLNDEIKAGSLLGYFA"
     gene            complement(2083..4020)
                     /gene="ftsH"
                     /locus_tag="RJ336_000567"
     CDS             complement(2083..4020)
                     /gene="ftsH"
                     /locus_tag="RJ336_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDZ5213035.1"
                     /translation="MNNNTPNNKGNPQGNNFFNKNPIFIFAIFAIVMIIIFKGFFDGN
                     GSFGGALNGNEVNKNVPYSELKKLIESGQINQVSIGQTTIKAISSSHNTVYTAKKVND
                     PELVSLLDSKNIAYGAYSETNWFTDILFSWVLPVFIFFGIWMFLASRMQKNMGSSILG
                     IGSSKKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVG
                     PPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFI
                     DEIDAIGKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAA
                     LLRPGRFDRQVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANI
                     INEAALLAGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIA
                     ETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVF
                     IGEISTGASNDLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTIKDYSEKM
                     AESLDDYVKKTLDERYKDVKDTLNTYKGAIETMVAALYEEETIEGNKVREIIKEFEDQ
                     NSLPTRLQELEEVKTEVKVEE"
     gene            complement(4024..4869)
                     /locus_tag="RJ336_000568"
     CDS             complement(4024..4869)
                     /locus_tag="RJ336_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDZ5213036.1"
                     /translation="MQKKYYELFFIVEERYKNLFLDFAFDLGIEAIEEKDNGVYIRSH
                     ESLEELSWALEIFAQKLTTTFNLNHKIISNLSLVEKENKDWIQEYKKGIKPILVDNVY
                     IHTTWQEEKKNFINIKINPALAFGSGHHESTYSCVKFLQKFSKSKLRALDLGCGSGIL
                     GIIMAKFGCNVEICDTDELAIDSSLENARLNGVDFHKAWCGSIDKANGLYNLIVANII
                     ADVILILEKDIKNHLEDNAILILSGILDKYSTRIKEKFQDLELIDEMQINEWCSFVYK
                     NNKKG"
     gene            complement(4892..5284)
                     /locus_tag="RJ336_000569"
     CDS             complement(4892..5284)
                     /locus_tag="RJ336_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HDZ5213037.1"
                     /translation="MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKN
                     EDVKVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNY
                     IVKPFTPQVLKEKLEDVLGTGSGEGAAE"
     gene            complement(5397..6290)
                     /locus_tag="RJ336_000570"
     CDS             complement(5397..6290)
                     /locus_tag="RJ336_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDZ5213038.1"
                     /translation="MYIKDIQRFEDNRYRARAYMSYILTRNLPNKLPDIHLETIKTAL
                     DKIAHEVVVFDALYILDISGMQIENAISLNKAHEIGQGEDRSTRSYFYRAVKLKRCVL
                     SDPYPSVLNNELCVTASIPIYDDKNNLLFVVCIDIKLEDILKIIQAGKFEFVFTQFSR
                     LVYFCFALVLFVITCFLFQKGFFSLFDNQAIGIEHMFESTIAITLALAIFDLAKTLIE
                     QEVLGRTKKEEGGIQKTMVRFLGSIIIALAIEALMLVFKLAIGDLSQMIYAIYLIGGV
                     SLLLLGLSVYLFTVKYKNNNI"
     gene            complement(6290..8062)
                     /gene="pglF"
                     /locus_tag="RJ336_000571"
     CDS             complement(6290..8062)
                     /gene="pglF"
                     /locus_tag="RJ336_000571"
                     /EC_number="4.2.1.135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (configuration-retaining)"
                     /protein_id="HDZ5213039.1"
                     /translation="MIFYKSKRLAFFLTSDIVLILLSVYLAFSLRFSGDIPSIFYHGM
                     MVSAIILLVLKLSFLFVFRIYKVAWRFFSLNEARKIFIALLLAEFCFFLIFYFFSDFF
                     NPFPRSAIVIDFVLSYMFIGTLRISKRMLVDFKPSKMKEEETPCIVVGATSKALHLLK
                     GAKEGSLGLFPVGVVDARKELIGTYCDKFVVEEKEKIKSYVEQGVKTAIIALRLEQEE
                     LKKLFEELVAYGICDVKIFSFTRNEARDISIEDLLARKPKDLDDSAVAAFLKDKVVLV
                     SGAGGTIGSELCKQCIKFGAKHLIMVDHSEYNLYKINDDLNLYKEKITPILLSILDKQ
                     SLDEVLKTYKPELILHAAAYKHVPLCEQNPHSAVINNILGTKILCDSAKENKVAKFVM
                     ISTDKAVRPTNIMGCTKRVCELYTLSMSDENFEVACVRFGNVLGSSGSVIPKFKAQIA
                     NNEPLTLTHPDIVRYFMLVAEAVQLVLQAGAIAKGGELFVLDMGKPVKIIDLAKKMLL
                     LSNRNDLEIKITGLRKGEKLYEELLIDENDAKTQYESIFVAKNEKVDLDWLNKEIENL
                     QICEDISEALLKIVPEFKHNKEGI"
     gene            complement(8064..9224)
                     /gene="pglE"
                     /locus_tag="RJ336_000572"
     CDS             complement(8064..9224)
                     /gene="pglE"
                     /locus_tag="RJ336_000572"
                     /EC_number="2.6.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine transaminase"
                     /protein_id="HDZ5213040.1"
                     /translation="MRFFLSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDY
                     SKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCD
                     ETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENEIVLIEDAAEAL
                     GSFYKNKALGTFGEFGAYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLH
                     YEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEYFSFLDELENS
                     RSNRWLSTALIDFDKNELNACQKDINISQKNITLHPKISKLIEDLKNEQIETRPLWKA
                     MHTQEVFKGTKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA"
     gene            complement(9322..9912)
                     /gene="pglD"
                     /locus_tag="RJ336_000573"
     CDS             complement(9322..9912)
                     /gene="pglD"
                     /locus_tag="RJ336_000573"
                     /EC_number="2.3.1.203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine N-acetyltransferase"
                     /protein_id="HDZ5213041.1"
                     /translation="MARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFEN
                     TLPKYDFFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSASVEENAGILIMPY
                     VVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVL
                     PNLSLADDSILGGGATLVKSQNEKGVFVGVPAKRKT"
     gene            complement(9899..10501)
                     /gene="pglC"
                     /locus_tag="RJ336_000574"
     CDS             complement(9899..10501)
                     /gene="pglC"
                     /locus_tag="RJ336_000574"
                     /EC_number="2.7.8.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl phosphate
                     N,N'-diacetylbacillosamine 1-phosphate transferase"
                     /protein_id="HDZ5213042.1"
                     /translation="MYEKVFKRIFDFILALVLLVLFSPVILITALLLKITQGSVIFTQ
                     NRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLKAFGKIVRSLSLDELLQLFNVLK
                     GDMSFVGPRPLLVEYLSLYNEEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
                     KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN"
     gene            complement(10494..11624)
                     /gene="pglA"
                     /locus_tag="RJ336_000575"
     CDS             complement(10494..11624)
                     /gene="pglA"
                     /locus_tag="RJ336_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     alpha-1,3-N-acetylgalactosaminyltransferase"
                     /protein_id="HDZ5213043.1"
                     /translation="MRIGFLSHAGASIYHFRMPIIKALKDRKDEVFVIVPQDEYTQKL
                     RDLGLKVIVYEFSRASLNPFVVLKNFFYLAKVLKNLNLDLIQSAAHKSNTFGILAAKW
                     AKIPYRFALVEGLGSFYIDQGFKANLVRFVINNLYKLSFKFAHQFIFVNESNAEFMRN
                     LGLKENKICVIKSVGINLKKFFPIYIESEKKELFWRNLNIDKKPIVLMIARALWHKGV
                     KEFYESATMLKDKANFVLVGGRDENPSCASLEFLNSGVVHYLGARSDIVELLQNCDIF
                     VLPSYKEGFPVSVLEAKACGKAIVVSDCEGCVEAISNAYDGLWAKTKNAKDLSEKISL
                     LLEDEKLRLNLAKNAAQDALQYDENNIAQRYLKLYDRVIKNV"
     gene            complement(11634..13775)
                     /gene="pglB"
                     /locus_tag="RJ336_000576"
     CDS             complement(11634..13775)
                     /gene="pglB"
                     /locus_tag="RJ336_000576"
                     /EC_number="2.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphooligosaccharide--protein
                     glycotransferase"
                     /protein_id="HDZ5213044.1"
                     /translation="MLKKEYLKNPYLVLFAMIILAYVFSVFCRFYWVWWASEFNEYFF
                     NNQLMIISNDGYAFAEGARDMIAGFHQPNDLSYYGSSLSALTYWLYKITPFSFESIIL
                     YMSTFLSSLVVIPTILLANECKRPLMGFVAALLASIANSYYNRTMSGYYDTDMLVIVL
                     PMFILFFMVRMILKKDFFSLIALPLFIGIYLWWYPSSYTLNVALIGLFLIYTLIFHRK
                     EKIFYIAVILSSLTLSNIAWFYQSAIIVILFALFALEQKRLNFMIIGILGSATLIFLI
                     LSGGVDPILYQLKFYIFRSDESANLTQGFMYFNVNQTIQEVENVDLSEFMRRISGSEI
                     VFLFSLFGFVWLLRKHKSMIMALPILVLGFLALKGGLRFTIYSVPVMALGFGFLLSEF
                     KAIMVKKYSQLTSNVCIVFATILTLAPVFIHIYNYKAPTVFSQNEASLLNQLKNIANR
                     EDYVVTWWDYGYPVRYYSDVKTLVDGGKHLGKDNFFPSFALSKDEQAAANMARLSVEY
                     TEKSFYAPQNDILKTDILQAMMKDYNQSNVDLFLASLSKPDFKIDTPKTRDIYLYMPA
                     RMSLIFSTVASFSFINLDTGVLDKPFTFSTAYPLDVKNGEIYLSNGVVLSDDFRSFKI
                     GDNVVSVNSIVEINSIKQGEYKITPIDDKAQFYIFYLKDSAIPYAQFILMDKTMFNSA
                     YVQMFFLGNYDKNLFDLVINSRDAKVFKLKI"
     gene            complement(13779..14876)
                     /gene="pglJ"
                     /locus_tag="RJ336_000577"
     CDS             complement(13779..14876)
                     /gene="pglJ"
                     /locus_tag="RJ336_000577"
                     /EC_number="2.4.1.291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylgalactosamine-N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     4-alpha-N-acetylgalactosaminyltransferase"
                     /protein_id="HDZ5213045.1"
                     /translation="MQKLGIFIYSLGSGGAERVVATLLPILSLKFEVHLILMNDKISY
                     EIPECQIHFLECSKPSENPILKFLKLPFLALKYKKLCRNLGIDTEFVFLNRPNYIALM
                     ARMFGNKTRLVINECTTPSVMYAKNNFNSLANKFLISLLYPKADLILPNSKGNLEDLV
                     QNFSINPKKCEILYNAIDLENIEQKALEDVALKDKFILSVGRLDKGKNHALLIRAYAR
                     LKTDLKLVILGEGVLKDELLALIKELNLEEKVLLLGFDNNPYKYMAKCEFFAFASVFE
                     GFSNVLIESLACSCAVVCTDHKSGARELFGDDEFGLLVEVDNENSMFQGLKTMLEDDK
                     LRKAYKNKAKTRAKAFDKVKIARDALKYLLG"
     gene            complement(14864..15793)
                     /gene="pglI"
                     /locus_tag="RJ336_000578"
     CDS             complement(14864..15793)
                     /gene="pglI"
                     /locus_tag="RJ336_000578"
                     /EC_number="2.4.1.293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc(5)-diNAcBac-PP-undecaprenol
                     beta-1,3-glucosyltransferase"
                     /protein_id="HDZ5213046.1"
                     /translation="MPKLSVIVPTFNRQVLLEKAIKSIQNQDFKDLEIIVSDDNSSDD
                     TKSVVQNLQKDDDRIKYFLNQNYKQGPNGNKNNGLDQASGEFVTFLDDDDELLSGALS
                     TLMQKANEGYAHVFGNCLIEKEGNLSKEFSGKGLEKDSEISKKDFLMAKFSGEFFSVF
                     KKSLLENKRFNEEFYGNEATLWVNLYKEKSFYIHKAFRIYRIFRQDSVTLGASKNAHR
                     VYLGYLELAKILENELRMSKDKDYKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSI
                     KINAPALILLILSIIPNNMIEKLSKIRVALCKN"
     gene            complement(15786..16865)
                     /gene="pglH"
                     /locus_tag="RJ336_000579"
     CDS             complement(15786..16865)
                     /gene="pglH"
                     /locus_tag="RJ336_000579"
                     /EC_number="2.4.1.292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-
                     diNAcBac-PP-undecaprenol
                     alpha-1,4-N-acetyl-D-galactosaminyltransferase"
                     /protein_id="HDZ5213047.1"
                     /translation="MMKISFIIATLNSGGAERVLVTLANALCKEHEVSIIKFHTGESF
                     YKLENEVKVTSLEQFRFDTLYHKIASRFKKFFALRKALKESKADVFISFLDTTNIACI
                     LANIGLKTPLIISEHSNEAYLKPKTWRFLRRVSYPFCDALSVLGSSDKVYYERFVKRV
                     KLLLNPCHFSDEIPFDSSFEKENLVLFIGRLDHNKNPVMFLKAIAHLDKNLQENYKFV
                     IAGDGELRQELEYKVKSLGIKVDFLGRVENVKALYEKAKVLCLCSFVEGLPTVLIESL
                     YFEVCRISSSYYNGAKDLIKDNHDGLLVGCDDEIALAKKLELVLNDENFRKELVNNAK
                     QRCKDFEISNIKEEWLKLIVEVKNA"
     gene            complement(16862..18556)
                     /gene="pglK"
                     /locus_tag="RJ336_000580"
     CDS             complement(16862..18556)
                     /gene="pglK"
                     /locus_tag="RJ336_000580"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type lipopolysaccharide transporter PglK"
                     /protein_id="HDZ5213048.1"
                     /translation="MLKKLFFILSKEDKNFLFFLLVFSVFVSFIETFAISLVMPFITL
                     ASDFSYFDRNKYLISLKEYLNIPVFEIIVYFGVGLIVFYVFRALLNAYYFHLLARFSK
                     GRYHAIAYKVFSKFLNINYEKFTQKNQSEILKSITGEVYNLSTMISSFLLLMSEIFVV
                     LLLYALMLLINYKITLFLSIFMVLNAFILVKILSPIIKKAGLRREEAMKNFFEILNTN
                     LNNFKFIKLKTKEDGVLSLFKAQSEAFSKANITNESVAAVPRIYLEGIGFCVLVFIVV
                     FLVLKNESDISGILSTISIFVLALYRLMPSANRIITSYHDLLYYHSSLNIIYQNLRQE
                     EENLGEGKLSFNQELKICNLSFGYEGKKYLFKNLNLNIKKGEKIAFIGESGCGKSTLV
                     DLIIGLLKPKEGQILIDKQELNASNAKNYRQKIGYIPQNIYLFNDSIAKNITFGDAVD
                     EEKLNKVIKQANLEHFIKNLPQGVQTKVGDGGSNLSGGQKQRIAIARALYLEPEILVL
                     DEATSALDTQSEAKIMDEIYKISKDKTMIIIAHRLSTITQCDKVYRLEHGKLKEEK"
     gene            complement(18550..19536)
                     /gene="galE"
                     /locus_tag="RJ336_000581"
     CDS             complement(18550..19536)
                     /gene="galE"
                     /locus_tag="RJ336_000581"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDZ5213049.1"
                     /translation="MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDL
                     QKIRTFKFFEQDLSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNT
                     TNLIETCLQTGVNKFIFSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDA
                     SMANPEFKHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRNKLFIFGDDY
                     DTKDGTCIRDFIHVDDISSAHLSALDYLKENESNVFNVGYGHGFSVKEVIEAMKKVSG
                     VDFKVELAPRRAGDPSVLISDASKIRNLTSWQPKYDDLGLICKSAFDWEKQC"
     gene            complement(19595..20389)
                     /locus_tag="RJ336_000582"
     CDS             complement(19595..20389)
                     /locus_tag="RJ336_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDZ5213050.1"
                     /translation="MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQK
                     EQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKIDGQNEKEMIANFFNFIENYEPKL
                     VSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNG
                     RGIKLDTLCSMVGLPGKYDVHGDEVMKLFCENELEKIHEYCESDVLNTYMLFLKYELI
                     KANVSEEDYIDFLSYMRDFLRAKKSDRSYTEVFAKACESEISKVQS"
     gene            20455..21483
                     /gene="waaC"
                     /locus_tag="RJ336_000583"
     CDS             20455..21483
                     /gene="waaC"
                     /locus_tag="RJ336_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HDZ5213051.1"
                     /translation="MKIAIVRLSALGDIIQSAVVLQFIKNFKKDIEIHWFVDEKFEGI
                     LKNHPLIDKLYALPLKDKKILKSLKILLKARKNNYNAVIDLQGLIKSAIVSRILSRNN
                     FGFDKNSLKESFAHNFYNQKLELDYNENVFVRYLSLTSFMLNTDFNVKNLAFKQDIFS
                     VDENLKQLLNNKLKLDKNEKNILIHVGSSVENKIYPKTKLAILCKLLINEFQQAKIWL
                     AWGNVKEYEFAKEVLNLSGIDETHIELAPKFNLEELMAFTKMMDLIIGNDSGPTHLAF
                     ALNKASITIFGATPSYRNAFQTHINKIIDAGKKIQNTKHIDKSDFCITRIEEEDIFKL
                     AKGLLNEK"
     gene            21473..22351
                     /gene="htrB"
                     /locus_tag="RJ336_000584"
     CDS             21473..22351
                     /gene="htrB"
                     /locus_tag="RJ336_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002932656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase
                     HtrB"
                     /protein_id="HDZ5213052.1"
                     /translation="MKNSDRIYLSLYYILKFFVTFMPECILHFLALIVARITFYLNKK
                     HRKIIDTNLQICFPQYTQKERDKLSLKIYENFAQFGIDCLQNQNTTKEKILNKVNFIN
                     ENFLIDALALKRPIIFTTAHYGNWEILSLAYAAKYGAISIVGKKLKSEIMYEILSQSR
                     TQFDIELIDKKGGIRQMLSALKKERALGILTDQDCVENESVRLKFFNKEVNYQMGASL
                     IAQRSNALIIPVYAYKEDGKFCIEFFKAKDSQNANLEELTLYQAQSCEEMIKKRPWEY
                     FFFHRRFASYNQGIYS"
     gene            22348..23049
                     /locus_tag="RJ336_000585"
     CDS             22348..23049
                     /locus_tag="RJ336_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDZ5213053.1"
                     /translation="MNISIVILTFNSQKYLQEVLQSVNFANEIILIDSGSTDDSLIIA
                     KAFKNIKIFHQDWLGFGKQKQFGVEKATNDWIFVLDSDEVFTEELKEEVLQIIKNPSF
                     KAYKVARLNFFFGEAITKMGLYPDYNIRLFHKKYAKFNEREVHESIICQEKIGKLKHH
                     FLHYAYENIEQFIDKQNKYSSLNPKKNNLLKALINPYWTFFKLYFVKLGFLEGKRGFI
                     IAKLYAQYTFWKYIK"
     gene            23060..23938
                     /gene="rfbA"
                     /locus_tag="RJ336_000586"
     CDS             23060..23938
                     /gene="rfbA"
                     /locus_tag="RJ336_000586"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002877054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HDZ5213054.1"
                     /translation="MKGIILAGGSGTRLYPSTLTLCKQLLPIYDKPMIYYPMSVLMLA
                     KIKEVLIISTPKDIDRFKELFKDGSFLGMQIQYKIQERPEGLAQGLILAQDFIQNDDI
                     ALILGDNIFYGQGFSDILENAKDDLKKGFASIFSYHVKDPERFGVVEMDQNGNVLSLE
                     EKPKNPKSNYVATGLYFYNNDAIDIAKNIKPSARGELEITDVNIEYLRLNKLKSQHLG
                     RGFAWIDTGTHDSLIEASSFVQTIELRQGYKIACLEEIAYNNNWIDNETLEKRALLLS
                     KSNYGQYLYKILSQGK"
     gene            23938..>24075
                     /locus_tag="RJ336_000587"
     CDS             23938..>24075
                     /locus_tag="RJ336_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HDZ5213055.1"
                     /translation="MYILVTGGAGFIGSNFLLYFFEKNPDAKIINLDFLTYASNISNL
                     NK"
BASE COUNT         8700 a         4384 c         2884 g         8107 t
ORIGIN      
        1 taaaatttca ctcttttcaa aatttttatg aagactttaa aagccacaaa tttattttta
       61 atcacgagca tcaaagcatt ttcaaaaaaa atacatcgca acaaattacc ttgcttcatc
      121 ctacacgtat aagaaggcct aaatttgtca attcaactca tgcgcttgct aaaataattc
      181 attcagtcgc tcatatagaa tttaatgcaa ttaacctggc tttagatgcg agttatcgct
      241 ttaaaaatct acctttgcaa ttttattacg attggctgga ggtggcagat gaggaaatta
      301 aacatttcaa acttttaaat tcagcacttg aagaacttgg ttacaaatat ggagattttc
      361 cagtgcatga taatttagaa tctgctctag aagctacaaa agactcttta agctttagaa
      421 tgggaatagt tcatagaggt ttagaagcta aagggcttga tgccaacccc tttgttgttc
      481 aaaaacttca aagctccaat catttcatta aaaatctttt aatggaatat cttgaaatta
      541 tacttaatga tgaaataaaa cacgttaaaa aaggagatac ttggtggaaa tttgcaaatc
      601 aaaacaagta tgattttatc gagctttgta aaacgtttaa acaattctct cttgcaggaa
      661 aaaaacttaa cattcaagca agaatcaaag ctggcttcac tcaagaagaa tgcgaagtca
      721 ttgaaaaatt ttactcttga tttcttatct taaattttga aacaataatg gtatataaaa
      781 cccgaataat tccataaagc acatacaagc ttgctaaaat tactaaactt tcaagaggat
      841 aaagatataa aaatgaaaat attataatta aaataatcaa aacttttaaa acactagaac
      901 gattaaaatc aagcttttta aagctaggat agcgtatatt acttaccatt aaaagcccta
      961 aaattgcttg aagcaccaaa aaaactacac cataaggctt taaaaaatca taactaataa
     1021 acgcataagt ccatatagca ctcacaactg ctgcagtagg tataggaaga cctataaaaa
     1081 cagaaggttc ataagtgcct gtggtaacat taaatctcgc caaacgaata gctccaaaaa
     1141 ccacaaaaaa agccgtaatc aaagatccaa gttttccaaa atcataacct atagccatat
     1201 aaaaaagaac cgctggagca actccaaaag ctactagatc agctaaagaa tcaaattcta
     1261 ctccaaattt tgaagtagaa tttgtaagtc ttgcaacacg gccatcaagc ccatcgcaaa
     1321 tcaaagataa aataatataa atcaaagctg tataataatt tccatgtatt gaagctataa
     1381 tagaaataac ccctaaaaaa gctgaagcag ctgtaaaaag attgggtaaa atataaatta
     1441 attgcggtct gttattcatt atttttcctt acgcaaaata gcctagcaat gagcctgctt
     1501 taatttcatc atttaagcct atatgaattc tagtatcttt tggtaaaagt aaacttatag
     1561 agccattgat taaaaaaccc attctatctc ctgcttttaa atcatgagaa atattatcaa
     1621 gctttaattt tctatcaaaa gaacctgcat agattcgcaa ggctatcgtt ttattctctt
     1681 taacttttgc caaaataaaa gctctttcat tcatcatttt tgcagatttt aattcactgc
     1741 acaaaaaaag cccatgtcgt aaacgaatat ctattataga cattgcaaaa ggtgtattaa
     1801 aattcccagc atcataaaga gcgtttttaa tagtaatttc aacacattca cccaaatctt
     1861 tatgatgaat attttctatt ttagtaaccc taccatccat aggtgcaaaa atagcttttt
     1921 catcactaca aacaagttct cttttgggcg ctctaaaaag aaaaatacaa attacaatta
     1981 atgctaatag caagatggaa aaagaataaa aaatccacac aaaaataaaa attaagctta
     2041 aaataataag acttaaatat ccatcttttg caataaaatc tttcattctt ctactttaac
     2101 ttcagtttta acttcttcga gttcttgtaa acgagttggt agactatttt gatcctcaaa
     2161 ctctttaata atctcacgca ctttattacc ttcaatagtt tcttcttcat aaagggctgc
     2221 aaccatagtc tcaatcgctc ccttataagt atttaaagta tctttaacat ctttatagcg
     2281 ttcatctaag gttttcttta cataatcatc taaagattct gccatctttt cagaatagtc
     2341 ttttatagtt tgcccaccac ttaagaaagt atttctttgt ttttcaagca ccataagtcc
     2401 tgcaatttca ctcataccat acatagaaat catagctttt atgatatcgg ttgctctttc
     2461 taaatcatta cttgcacccg ttgaaatttc acctataaac acttcttcag ctgcacgacc
     2521 acccaaaagt acatctactt cagcgataag ttcatgtttt tgcattaaaa atttattttc
     2581 ctcaggagta tttaaagtat aacctaaagc cgcaagacca cgcggaatca cagaaacctt
     2641 acttacacgt tttgcgcctt tggttgtttc agcaatcaag gcatgaccac attcatgata
     2701 agtaacaatt ttcttttctt tttcattaat acgacgtgat ttcttctcaa gtcctgctat
     2761 agctctttcg acagcttcaa ctaaatcatt ttgttctaca tattttttag aatccctacc
     2821 cgctaaaagc gctgcttcat taataatatt tgcaagatca gctcctgcaa gccctgcagt
     2881 taagcgtgct atatcttcta ctttaacttt tggggatatt ttgacatctt tcatgtgcac
     2941 ttttaaaata tcacacctac ctttaaaatc aggtttatca actaaaactt gtctatcaaa
     3001 ccttcctggt cttaaaagcg ctgcatctaa aacttctggg cgatttgttg ctgctaaaac
     3061 aatgactggg gaactttctg tcccaaagcc atccatttca gccaaaagct gatttaaagt
     3121 ttgctctctt tcatcgtttc cacccatcat gccacttgct gcacgacttt taccaatagc
     3181 atctatttca tctataaaaa caatagcagg agcttctttt tttgcatttt caaacaaatc
     3241 tctcacacga gaagcaccta cacccacaaa catttctata aaagatgaac ctgaaacact
     3301 aaaaaacggc acatcagctt cacctgcaac tgcttttgca agcaaagttt ttcctgtacc
     3361 tggaggtcca acaagtaaaa gcccttttgg aattttagct cccaatttaa tatatctttc
     3421 aggatacttt aaaaaatcta caatttcttt tacttcttct ttagcttctt caacaccagc
     3481 tacatcgcta aattttactt taggtttttc tgaatttaca agcttcttag aacttcctat
     3541 acccaatata gaacttccca tatttttttg catacgactt gccaaaaaca tccaaatacc
     3601 aaagaaaata aatactggca aaacccatga aaaaagtata tccgtaaacc aatttgtttc
     3661 agaatacgca ccataagcga tatttttact atctagtaaa ctcacaagct caggatcatt
     3721 aacttttttt gctgtataaa cagtattgtg agagcttgaa atcgctttga ttgttgtttg
     3781 tcctatgcta acttgattga tttgtccact ttcaataagc ttttttaact cagaataagg
     3841 gacattttta tttacttcat tgccattcaa tgccccgcca aaagaaccat tgccatcaaa
     3901 aaatccctta aaaataatta tcattacaat tgcaaaaatc gcaaaaataa aaatgggatt
     3961 tttgttaaaa aaattattac cctgcggatt acccttatta tttggggtat tattattcat
     4021 tacttatcct tttttattat ttttatatac aaaactacac cactcattga tttgcatttc
     4081 atcaatgagt tccaaatctt gaaatttttc tttaattctt gttgaatatt tatctaaaat
     4141 tcctgacaaa ataagtatag cattatcttc taaatggttt ttaatatctt tttctaaaat
     4201 taaaatcaca tctgcaatga tatttgcaac aattagatta tataaaccat ttgctttatc
     4261 tatagatcca caccaagcct tgtgaaaatc aacaccattt aatcttgcat tttctaaaga
     4321 actatcaata gccaactcat cagtatcaca aatttcaaca ttgcagccaa actttgccat
     4381 aataataccc aaaattccac taccacaacc aagatctaaa gctcttaatt tacttttaga
     4441 aaatttttgt aaaaatttta cacaagaata tgtgctttcg tgatgtcctg agccaaaggc
     4501 taaggctgga ttaatcttta tatttataaa attctttttt tcttcttgcc aagtggtatg
     4561 gatgtaaaca ttatccacta aaataggttt tatgcctttt ttatattctt gtatccagtc
     4621 cttgttttct ttctctacaa gacttaaatt agaaataatt ttatggttta aattgaaagt
     4681 agttgtaagt ttttgagcaa atatttcaag tgcccatgaa agctcttcca aactctcatg
     4741 ggatctaatg taaacaccat tatctttctc ttctatggct tctataccta aatcaaaagc
     4801 aaaatcaaga aataaatttt tataccgctc ttctacgata aagaacaatt cgtaatattt
     4861 tttttgcatt tagaatttta aaaatcagcc tttactcagc tgcaccttct ccacttcctg
     4921 ttcctaaaac atcttcaagt ttttccttta aaacttgtgg agtaaaaggt tttacaatat
     4981 agttatttac gccagctttt aaagcagtaa tcacttcagc ttttccgccc tcagttgtaa
     5041 ccatgataat aggcatatct tcatattttt tctctgctct tacttttttt accaactcca
     5101 agccattcat ttctggcata ttccaatctg taattaaaac ttttacatct tcatttttag
     5161 ttaataaatc ccaagcttca acgccatgct cagcttctaa aacatcatcg tgtccaagtc
     5221 ttgttagggt atttttaata atccttctca tagtagaact gtcatcaaca actaacaatt
     5281 tcacaatttc gtcctttcaa agtttttata gttttatttt acccttttta gccttattaa
     5341 tcaagctaaa aaattttaaa aaacagcatt atatcatctt ttacttaaat ttttactcaa
     5401 atattattat ttttatactt aaccgtaaat aaatatacac ttaaacctaa aagaagcaag
     5461 ctcactccac cgataagata aatcgcataa atcatctgag aaagatcacc aatggcaagt
     5521 ttaaatacca acatcaaagc ttctatagct aaagcaatga taatagaacc caaaaatctc
     5581 accatggttt tttgaattcc accttcttct ttttttgtcc ttcctaatac ttcttgttcg
     5641 atcaaagttt ttgccaaatc aaaaatagct aaagctaaag ttatggcaat ggtactttca
     5701 aacatatgtt ctatgcctat agcttgatta tcaaaaagac taaaaaaacc tttttgaaat
     5761 aaaaaacaag taatcacaaa taaaaccagt gcgaaacaaa aatacaccaa acgactaaat
     5821 tgagtaaaaa caaactcaaa ttttcctgct tgaataatct ttaaaatatc ttcaagcttg
     5881 atatcaatac aaacaacaaa aagcaagtta tttttatcat cgtaaattgg tatagaagct
     5941 gttacgcaaa gttcattgtt taaaaccgaa ggataaggat cgctcaaaac acatcgtttt
     6001 aattttacag ctctataaaa ataagaacga gtacttctat cctcaccctg ccctatttca
     6061 tgagccttat ttaaggaaat cgcattttct atttgcatgc ctgaaatatc taaaatatac
     6121 aaagcatcaa aaacaacaac ttcatgagct attttatcca aagctgtttt aatcgtttca
     6181 aggtgaatat caggaagttt attgggtaga tttcttgtta aaatataact catataagct
     6241 ctagcacgat agcgattatc ttcaaatctt tgtatatctt ttatatacat tatatgcctt
     6301 ctttattgtg tttaaattca ggtacaatct ttaataaagc ctctgaaata tcttcacata
     6361 tttgtaaatt ttctatctct ttattaagcc aatcaagatc aaccttctca ttctttgcta
     6421 caaaaatact ctcatattgg gttttagcat cattttcatc aatcaaaagc tcttcataaa
     6481 gcttctcacc ttttcttaaa cctgtgattt taatttctaa atcattgcga ttagaaagta
     6541 aaagcatttt tttagctaaa tctatgattt tcacaggctt acccatatcc aaaacaaaaa
     6601 gttctccccc ttttgcgata gctccagctt gcaaaacaag ttgcactgcc tcagccacaa
     6661 gcataaaata acgcactata tcagggtgtg ttaaagttaa aggctcatta ttggcaattt
     6721 gtgctttaaa tttcggtatc acactaccac tagaacctaa aacattacca aaacgcacac
     6781 aagcaacttc aaaattttca tcactcatac ttaaagtata aagctcacaa actctcttag
     6841 tgcaacccat aatatttgtt ggtcgtactg ctttatctgt acttatcatc acaaatttag
     6901 ctactttatt ttctttagca ctgtcgcata aaattttggt tcctaaaata ttattgatta
     6961 ctgctgaatg tggattttgt tcgcaaagag gcacatgttt ataagcggct gcatgtaaaa
     7021 taagctcagg tttataagtt tttaatacct catctaaact ttgcttatct aaaatactta
     7081 acaaaatagg agtaattttt tctttatata aatttaaatc atcattgatc ttataaagat
     7141 tatactcact atgatcaacc ataataagat gcttagcacc aaatttaata cattgcttac
     7201 aaagttcact gcctatagtt ccacctgctc cacttaccaa aactaccttg tcttttaaaa
     7261 aagccgccac agcactatcg tctaaatctt ttggttttct agcaagcaag tcttctatac
     7321 taatatctct tgcttcattt cttgtaaaag aaaatatttt tacatcacaa ataccataag
     7381 ctacaagttc ttcaaaaagt tttttaagct cttcttgttc aagtcttaaa gcaataatgg
     7441 cagtttttac cccttgttct acataagatt ttattttttc tttttcttct acaacaaatt
     7501 tatcacaata agtccctata agctcttttc tcgcatcaac tacgcccaca ggaaaaagcc
     7561 ctaaagaacc ttcttttgcg ccttttaaca aatgtaaagc cttagaagtt gcccctacta
     7621 caatacaagg agtttcttct tctttcattt tagaaggttt aaaatccaca agcattcttt
     7681 tgctaattct taaagtacct ataaacatat aagaaagaac aaaatctatc acaatagcac
     7741 ttcttggaaa aggattaaaa aaatcactaa aaaaataaaa aataagaaaa aaacaaaact
     7801 cagctaaaag caaagcgata aaaatttttc ttgcttcatt gagggaaaaa aatctccaag
     7861 ctactttata aattctaaaa acaaacaaaa atgaaagttt taaaacaagc aaaataatag
     7921 cagaaaccat catgccatga taaaaaatac tcggaatatc tccactaaat ctcaaagaaa
     7981 aagccagata aacactaagt aaaattaaaa caatatctga agttaaaaaa aatgctaatc
     8041 ttttgctttt ataaaaaatc attttaagcc tttatgctct ttaagatcag ttttgaaatt
     8101 tcataaacat catctttgct catcgccgta ccacttggca aacaaattcc tttttggaaa
     8161 aataactcac tattgccatt aagataagcc ttagttcctt taaatacttc ttgagtgtgc
     8221 atagctttcc ataatggtct tgtttctatt tgttcatttt tcaaatcttc tatgagtttt
     8281 gaaatttttg gatgcaaagt aatatttttt tgactgatat ttatatcttt ttgacaagca
     8341 ttaagttcat ttttatcaaa atcaatcaaa gctgtactta accagcgatt acttcttgaa
     8401 ttttctaatt catctaaaaa gctaaaatac tctcctaaaa attctttata ccactcataa
     8461 atttctcttt ttttaagcac tctttgttct aaaacctcca tttgtgctac accaatagct
     8521 cctaaaacat tgcttaaacg gtaattataa ccatagtcta aatgttcata atgcaaacaa
     8581 ttttccctag cttgagtgct ataaaatctt gctttttcaa tcttttcttt attttttcct
     8641 ataagcatac ctccacctga agtggtgata attttattgc cattataaga ataagctcca
     8701 aattctccaa aagttcctaa ggctttattc ttataaaaac ttcctaaagc ttcagcagca
     8761 tcttcgatta aaacaatttc attttccttg caaatttcaa caatttcatc cattttagcc
     8821 gcattgccat aaagatgagt taaaatcaat gcttttggtt ttttttcaca ttccttaata
     8881 gcaagtttta acaaatctac atcgatatta taagtttcat cacaatctat aaatacaggt
     8941 tttgctttaa gataacaaat aggcgccact gaagcgataa aagtaaaaga agaagccaaa
     9001 acaatatcat cttgttttac ccctgccacc cttaaagcta aatgcaaagc tgctgtagct
     9061 gaatttaaag ctaaggcatt ttcacttttg ctataatctt ttacactttg ctcaaagcga
     9121 tttacaaatt cacccaaagg tgctatataa ttgcttttga aaacttcttc tatatatttt
     9181 aattcattac cgcccatatg cggaggagaa agaaaaaatc tcatgattta tcctttgtat
     9241 aaaacaaaat ttttataaat taactctatt ttacctaaaa aaatttacaa agaatcaaac
     9301 aaaaatcttt ttataatcat ttcatgtttt tctttttgca ggcactccca caaaaacacc
     9361 tttttcattt tggcttttaa ccaaagttgc tccaccaccc aaaatactat catctgctaa
     9421 gcttaaatta ggcaaaacac aagaattaat ccctaaaaaa caatttttac cgatttttac
     9481 attacccgca catttagccc ctacgcttac atgagaaaat tcccctatca cgcattcatg
     9541 ctcaatcaca cttgaagtat ttaaaatcac gcctttttct attttggctt tagcgttaat
     9601 cactacatag ggcataatta aaatccctgc attttcttcc acgcttgcac taggacttat
     9661 aagtgcactt ttatgaataa gattaactat tttaaagcca ttttctgaaa ttttttgata
     9721 aatctttttt cgaatttcat tgtttcctat agctataaaa aaatcatatt taggcaaggt
     9781 gttttcaaat ttcattcctt taaaatcatc taaaaaaata cattctttat agcccatatt
     9841 tttagccaca tcttcacaaa caagcccatg accactagca ccataaatat aaattttttc
     9901 agttcttgcc attaaatttc tctgttgtaa catggccttc tttgcttacc ccgcttcgtt
     9961 ttaaaacctt taaagctgtt aaaaacatga tttttaaatc aagcaaaaaa gaaatatttt
    10021 tcacataata cacatcaagt tcgaattttt tctgccaaga aatagcattt ctgccattta
    10081 cctgcgccca tcctgttata cctggacgca ccttatggcg caatttttgc tcttcattat
    10141 aaagggataa atactcaacc aaaagaggtc taggccccac aaaactcata tcccctttta
    10201 aaacattaaa aagttgcaaa agctcatcca aacttaagct tctaacaatt tttccaaagg
    10261 ctttcaaacg caattcatcg cttaataact cacccttctc atctctttca tcgctcatgg
    10321 ttttaaattt ataaatttta aaaatttttt catctaaccc agggcgattt tgagtgaaaa
    10381 tcacacttcc ttgagtgatt tttaaaagta aagcagtgat taaaatcacc ggagaaaaaa
    10441 gtactaaaag cactaaagct aaaataaaat caaaaattct tttaaaaact ttttcataca
    10501 ttcttaatta ccctatcata aagttttaaa taacgctgtg cgatattatt ttcatcgtat
    10561 tgtaaagcat cttgggcagc atttttagct aaatttaatc ttaatttttc atcttctaat
    10621 aaaagtgaaa ttttttcgct taaatcctta gcattttttg tttttgccca aagtccatca
    10681 taagcattag aaatagcctc tacacaacct tcacaatcac tcaccactat agccttgcca
    10741 caagcttttg cctccaaaac acttacagga aagccttctt tatagcttgg taaaacaaaa
    10801 atatcacaat tttgcaaaag ctcgactata tcacttctag cacccaaata atgcaccaca
    10861 cccgagttta aaaactccaa actcgcacaa gaaggatttt catctcttcc accaactaaa
    10921 acaaaatttg ctttgtcttt tagcatagta gcactttcat aaaattcttt tacaccttta
    10981 tgccataaag ctcttgctat cataagaaca ataggttttt tatctatatt taaatttctc
    11041 caaaaaagct cttttttttc cgattctata taaataggaa aaaatttttt taaattgatc
    11101 cctacggatt ttatcacaca aattttattt tccttaagtc ctaaattccg cataaactcg
    11161 gcattacttt cattgacaaa aataaattgg tgtgcaaatt taaaacttaa tttataaaga
    11221 ttattaataa caaaacgtac taaatttgcc ttaaaacctt gatctatata aaaagatccc
    11281 aagccttcta ccaaagcaaa acgataagga atttttgccc attttgccgc taaaattcca
    11341 aaggtattgc ttttgtgtgc cgcactttga ataagatcaa gatttaaatt ttttaaaacc
    11401 ttagcaagat aaaaaaaatt ctttaaaact acaaaaggat ttaaactagc tcttgaaaac
    11461 tcataaacaa ttacttttaa accaagatct ctaagttttt gcgtgtattc atcttgcggc
    11521 actataacaa aaacttcatc ttttctatct tttaatgctt ttataatagg cattctaaaa
    11581 tgataaatac ttgctcctgc atgtgataaa aatcctattc tcattttcaa cccttaaatt
    11641 ttaagtttaa aaaccttagc atctctagaa ttaatcacca agtcaaataa attcttatca
    11701 taatttccta aaaaaaacat ttgcacataa gcactattaa acatggtttt atccattaaa
    11761 ataaattgtg cgtaaggaat agcactatcc tttaaataaa aaatataaaa ctgagcctta
    11821 tcatcaattg gagtgatttt gtattcacct tgtttaatag aattaatctc tacgatacta
    11881 tttacagaaa ccacattatc acctatttta aaacttctaa aatcatcgct taaaaccact
    11941 ccgttgctaa gataaatttc tccattttta acatcaagtg gataagctgt gctaaaggta
    12001 aaaggtttat ccaaaactcc tgtatctaaa ttaataaaag aaaaactagc caccgtagaa
    12061 aaaatcaaag acattctagc gggcatataa agataaatat cacgagtttt tggcgtatcg
    12121 attttaaaat caggttttga taatgaagct agaaacaaat ccacattgct ttgattataa
    12181 tctttcatca tggcttgcaa aatgtctgtt tttaaaatat cattttgcgg agcataaaag
    12241 cttttttctg tatattctac actaagtctt gccatattag ctgcagcttg ttcatctttg
    12301 cttaaagcaa aagaagggaa aaaattatcc ttacctaaat gctttccacc atctactaaa
    12361 gttttcacat cgctataata acgcacagga taaccataat cccaccaagt taccacataa
    12421 tcttctctat tggctatatt ttttaattga tttaataatg atgcttcatt ttgagaaaaa
    12481 actgttggcg ctttatagtt gtaaatatgg ataaatactg gagctaaagt caaaatagtt
    12541 gcaaaaacaa tacaaacatt tgaagttaat tggctatatt ttttaaccat tatagcctta
    12601 aactcgctca ataaaaaacc aaatcctaag gccattacag gtacagaata aatggtaaat
    12661 ctaagccccc cttttaaggc taaaaaccca agcaccaata taggtaaagc cataatcata
    12721 cttttatgtt ttctcaaaag ccatacaaaa ccaaacaaag aaaacaaaaa aacaatttca
    12781 ctaccactaa ttcttcgcat aaattcgcta agatctacat tttcaacttc ttgtatggtt
    12841 tgattgacat taaaatacat aaagccctgc gttaaattcg cactttcatc acttctaaaa
    12901 atataaaatt taagctgata aagtatagga tcaaccccac cacttaaaat caaaaatatc
    12961 aaagttgcac tacctaaaat tcctataatc ataaaattta agcgtttttg ctctaaggcg
    13021 aataaagcaa aaagtattac tataatggca ctttgataaa accatgctat atttgaaaga
    13081 gtaagagaag acaaaatcac agctatataa aaaatctttt cttttctatg aaaaataagt
    13141 gtataaatta aaaaaagtcc aattaaagct acatttaaag tataacttga aggataccac
    13201 caaagataaa ttcctataaa taacggcaag gcaatcaatg aaaaaaagtc tttttttaaa
    13261 atcattctta ccataaaaaa taaaataaac ataggcaaaa caattaccag catatccgta
    13321 tcataatacc cactcatagt gcgattataa taactgtttg ctatacttgc taaaagagca
    13381 gctacaaagc ccattaaagg acgtttgcat tcgttagcta gcaaaatagt aggaatcacc
    13441 accaaagaag ataaaaaagt actcatatat aaaatgatac tttcaaaaga aaaaggtgtg
    13501 attttataaa gccaataagt aagcgcggat aaagaagatc cataataact caaatcatta
    13561 ggctgatgaa aacctgctat catatctctt gcgccctcag caaaagcata gccatcattt
    13621 gaaatgatca ttaactgatt attgaaaaaa tactcattaa actcacttgc ccaccaaacc
    13681 caataaaacc tgcaaaatac actaaaaaca taagctaata taatcatcgc aaacaaaact
    13741 aaataagggt tttttaaata ctcttttttc aacatctttt atcctaataa atatttcaaa
    13801 gcatcgcgtg caatttttac tttatcaaaa gctttagccc tagttttagc cttattttta
    13861 tacgcttttc ttaatttatc gtcttcaagc atagtcttta aaccctgaaa catggagttt
    13921 tcattatcta cttctactaa aagtccaaat tcatcatcgc caaaaagctc tcttgcgcca
    13981 cttttatgat cagtgcaaac caccgcacaa gaacaagcta agctttcaat taaaacattt
    14041 gaaaagcctt caaatacaga agcaaaagca aaaaattcgc atttagccat gtatttataa
    14101 ggattattat caaatcctaa aagcaaaacc ttttcttcta aatttaactc tttaatcaaa
    14161 gctaaaagct catctttaag cacaccttca cctaaaatca caagctttaa atctgttttc
    14221 aatcttgcat aagcacgaat taataaagca tgatttttac ctttatcaag cctgcctaca
    14281 cttaaaataa atttatcttt taaagctaca tcttcaagag ctttttgctc tatattttct
    14341 aaatcgatgg cattgtataa aatttcacat ttttttggat ttatactaaa attttgcact
    14401 aaatcttcta aatttccctt agaattaggc aagattaaat cagcttttgg gtaaagcaaa
    14461 gaaattaaaa atttatttgc caaagaatta aaattatttt tcgcatacat cacacttggc
    14521 gtagtgcatt cattgatcac aaggcgagtt ttgtttccaa acattcttgc cattaaggct
    14581 atataattag gtcgatttaa aaaaacaaat tctgtatcaa tgcctaaatt tctgcaaagt
    14641 tttttatatt ttaaagccaa aaaaggtagt tttaaaaatt tcaaaatagg attttcacta
    14701 ggttttgaac attctaaaaa atgaatttga cactctggaa tttcataaga aattttatca
    14761 ttcattaaaa tcaaatgcac ttcaaatttc aaacttaaaa taggcaataa agtcgccaca
    14821 actctttcag caccaccact tcctaaagaa taaataaaaa tgcctaattt ttgcataaag
    14881 ccacccgaat ttttgataat ttttcaatca tattatttgg aattatactt aaaatgagta
    14941 atatcaaagc aggagcgttg atttttatac tcaggctttt aaacaaacac ttataaagag
    15001 ctttataatt ttttgcaagt tttgcataat aagctgccat tttataataa ctcgcacaag
    15061 tttttttata atctttatcc ttactcattc taagttcatt ttctaaaatt ttagcaagct
    15121 ctaaatatcc caaatacacc ctatgagcat ttttactcgc ccctaaagtc acgctatctt
    15181 gcctaaaaat cctataaatc ctaaaagcct tatggatata aaaacttttt tccttgtata
    15241 aatttaccca aagcgtggct tcattgccat aaaattcttc attaaaacgc ttgttttcaa
    15301 gtagagattt tttaaaaaca gaaaaaaact ctccgctaaa tttagccatt aaaaaatctt
    15361 ttttagaaat ttcactatct ttttccaagc ccttaccgct aaattccttg cttaaatttc
    15421 cttctttttc tatcaaacaa tttccaaaaa catgagcata accctcattt gctttttgca
    15481 tcaaggtact taaagcccca gataaaagct catcatcatc atctaaaaaa gttacaaact
    15541 cgccacttgc ttgatctaag ccattgtttt tattgccatt tgggccttgt ttgtaatttt
    15601 gatttaaaaa atacttaatg cgatcatcat ctttttgtaa attttgcacc acacttttag
    15661 tatcatcact agaattatca tcgcttacaa tgatttctaa atctttaaaa tcttgatttt
    15721 gtatgctttt aatagccttt tctaacaaaa cttgacgatt aaaagttggc actataacag
    15781 aaagtttagg catttttaac ctcgactata agcttaagcc attcttcttt gatgttagaa
    15841 atttcaaagt ctttacacct ttgtttggca ttatttacaa gttcttttct aaaattttca
    15901 tcatttaaaa caagttcaag ttttttagca agtgctattt catcatcaca acctaccaaa
    15961 agcccatcat gattatcttt gattaaatcc ttagcaccat tataataaga acttgaaatt
    16021 ctacaaacct caaaatacaa actttcaatt aaaaccgttg gcaaaccctc tacaaaagaa
    16081 caaaggcaaa gcacttttgc tttttcataa agagccttga cattttcaac gcgtcctaaa
    16141 aaatcaactt ttattcctaa agattttacc ttgtattcaa gttcttgcct taactctcca
    16201 tctcctgcta taacaaattt ataattttct tgcaaatttt tatccaaatg tgctatagct
    16261 tttaaaaaca ttacagggtt tttgttgtga tctaaacgcc ctataaaaag aaccaaattt
    16321 tctttttcaa aactagaatc aaaaggaatt tcatcgctaa aatgacaagg gtttaataaa
    16381 agcttaaccc tttttacaaa tctttcataa tacaccttat cactgcttcc aagcacactt
    16441 aaagcatcac aaaaaggata gcttaccctt cttaaaaaac gccaagtttt aggttttaaa
    16501 tacgcttcat tactatgctc gctaatgatg agtggagttt taagtcctat attagctaga
    16561 atacaagcaa tattagttgt atccaaaaaa gaaataaaaa catcagcctt actttctttt
    16621 aaagcctttc ttaaggcaaa aaatttctta aaacgacttg cgattttatg ataaagcgtg
    16681 tcaaatctaa attgttctaa acttgtaact ttaacttcat tttcaagctt ataaaaagat
    16741 tctcctgtat gaaatttaat aatacttact tcatgctctt tgcaaagcgc attagctaag
    16801 gttactaaaa cacgctcagc gcctcctgaa tttaaagttg cgataataaa gcttattttc
    16861 atcatttctc ctctttaagc ttaccgtgtt ctaaacgata aaccttatca cattgcgtta
    16921 tcgtagaaag gcgatgtgcg ataataatca tggttttatc tttagaaatt ttataaattt
    16981 catccatgat ttttgcttca ctttgagtat caagcgcaga agttgcttca tcaagcacta
    17041 aaatttcagg ctctaaatac aaagcccttg ctatagctat gcgttgtttt tgtcccccgc
    17101 ttaaattact ccccccatcg cctacttttg tctgaactcc ttgaggtaaa ttttttataa
    17161 aatgctctaa atttgcttgt ttgataacct tattaagttt ttcttcatca accgcatctc
    17221 caaaagtgat atttttagct atgctatcat taaaaagata gatattttgc gggatatagc
    17281 ctattttttg gcgataattt tttgcattac ttgcatttaa ttcttgctta tcaattaaaa
    17341 tttgcccttc ttttggtttt aaaagtccta tgataagatc tactaaggta ctttttccac
    17401 aaccactctc ccctataaaa gcgatttttt cacctttttt aatgtttaaa ttaagatttt
    17461 taaataaata tttttttccc tcataaccaa agctaagatt gcaaatttta agctcttgat
    17521 taaaacttaa ttttccctcg cccaaatttt cttcttcttg tcttaaattt tgataaataa
    17581 tattcaaaga agaatgataa taaagcaaat catgataact tgtgataata cgatttgcgc
    17641 ttggcattaa gcgataaagc gctaaaacaa aaatagaaat cgtggataaa atacctgaaa
    17701 tatcactttc atttttcaaa accaaaaata ccacgataaa aacaagcaca caaaagccta
    17761 ttccttcaag ataaattcta ggcaccgcag ctacgctttc attggtaata tttgctttag
    17821 aaaaagcttc actttgtgct ttaaaaagac ttaatactcc atcttctttg gttttaagct
    17881 tgataaattt aaaattattt aaatttgtat ttaaaatttc gaagaaattt ttcatcgctt
    17941 cttcgcgtct tagtcctgct tttttaatga tagggcttaa aattttcact aaaataaaag
    18001 catttaacac cataaaaata cttaaaaata aagtgatttt ataattaatc aaaagcatta
    18061 aagcataaag caaaagcact acaaaaattt cactcatcaa aagtaaaaat gatgaaatca
    18121 tagtgcttag attataaact tcccctgtaa tggactttaa aatttcagat tgattttttt
    18181 gagtaaattt ttcataatta atatttaaaa atttagaaaa aaccttataa gcgatcgcat
    18241 gataacgtcc tttagaaaat cttgccaaaa gatgaaaata atacgcattt aacaaagctc
    18301 taaatacata aaaaacaata agccccactc caaaataaac aatgatttca aaaacaggga
    18361 tattaagata ttcttttagg ctgattaaat atttattacg atcaaaataa gaaaaatcac
    18421 tagccaaagt gataaaaggc attaccaaag aaatcgcaaa agtttctata aaagaaacaa
    18481 atactgaaaa aacaagcaag aaaaataaaa aatttttatc ttccttgctt aaaataaaaa
    18541 aaagtttttt tagcactgtt tttcccaatc aaaagcagat ttacaaataa gccctaaatc
    18601 atcatattta ggctgccaag aagtaagatt tctgatttta cttgcatcag aaatcaatac
    18661 actaggatca cccgcacggc gtggggcaag ttctacttta aaatccactc cgctaacttt
    18721 tttcatcgct tcaatcactt cttttacgct aaaaccatgt ccataaccta cattaaaaac
    18781 attgctttca ttctctttta aataatccaa agccgataaa tgcgcacttg aaatatcatc
    18841 cacatggata aaatctctta tgcaagtgcc atcttttgta tcataatcat cgccaaatat
    18901 gaaaagttta ttacgttttc ctgcggcaca ttcagctgca acttttataa gcaaagtcgc
    18961 ttttggatag cgttgtccta aagtataatc catgcaagca cctgcaacat taaaatatct
    19021 taaaatacaa tgcttaaatt caggatttgc catacttgca tcacgcaaaa cctcttcgct
    19081 cataagctta ctacgcccat aaggattaat aggtgctaaa ggacttgttt cgctcacaac
    19141 gggagtttgt ggttcgccat aagtggctgc cgttgaagaa aatataaatt tattcactcc
    19201 agtttgcaaa caagtttcga tgagatttgt cgtattaaca gtgttattca tataatactt
    19261 taaagggttt tgcatacttt caaaaacttc aatgctcgct gcaaaatgca caatagcgtc
    19321 aaatttttct ctctcaaaca atgcttttac gccttgaaaa tcacttaaat cttgttcaaa
    19381 aaatttaaaa gttcttattt tttgcaaatc ttctattgcg attttagaac ccttagaaag
    19441 attatctaaa acacaaattt catgatctgt ttttaaaaat tgtcttaaag tatgagaacc
    19501 tatataacct gcaccaccgc taataagaat tttcatcatc attccttttt ctaaaaaata
    19561 tcaaaaataa attttaatat attttcttaa atacttaaga ttgaactttt gaaatttcac
    19621 tctcacaagc ttttgcaaaa acttctgtat aggaacgatc tgattttttt gcacgcaaaa
    19681 aatctctcat ataagaaaga aaatcaatat aatcttcttc actaacatta gctttaataa
    19741 gttcatattt taaaaaaagc atataagtat ttaaaacatc actttcacaa tattcgtgaa
    19801 ttttttcaag ttcattttca caaaaaagtt tcatcacctc atcgccatgc acatcatatt
    19861 ttcctggtaa acccaccata gaacaaagtg tatcaagctt tattccacgc ccattagatc
    19921 ctaaggattc taataaatcg caatgtttta attctgaaaa tcttgtttta taattattcc
    19981 atttatcgct ttgagtatct aaataagttg ctgcttttaa attgtatttt aaagccctta
    20041 aaacaagaac aggcatatcg aaatttttac cattaaagct gactaatttt ggctcataat
    20101 tttctataaa attaaaaaaa ttagcaatca tttctttttc attttgccca tcaattttat
    20161 ttactttgat aaattttcca aaattatcac ttaaaaccgc acaaatactg atgattttat
    20221 gataaggcaa aggcaaaaac tcactcccac tttgttcttt ttgccactga agtgctttta
    20281 aacttacctc caaatcactt ccttcaaaac ccaaagtttt gcgaataagc tcaacatctg
    20341 gtacactctc gcaatcaaaa acacaaatat aaccttcatt ttttgccatt tttaaccttt
    20401 ttttaaataa tttcgctaaa atcatagcaa aaattttaaa atattaggct tttaatgaaa
    20461 atagcaattg ttcgtttatc agcacttggt gatattatcc aaagtgccgt ggttttgcaa
    20521 tttatcaaaa attttaaaaa agatatagaa attcattggt ttgtagatga aaaatttgaa
    20581 ggcatactta aaaaccatcc tttaatagac aaactctatg ccctaccctt aaaagacaaa
    20641 aaaattttaa aaagcctaaa aattcttctt aaagcaagaa aaaacaacta taatgcagta
    20701 atagatctac aagggcttat aaaatctgct attgtaagtc gaattttaag tagaaataat
    20761 tttggttttg ataaaaacag ccttaaagaa agttttgctc ataatttcta caaccaaaaa
    20821 cttgagttag attacaatga aaatgtattt gtaagatact taagtcttac ctcctttatg
    20881 ttaaatactg attttaatgt caaaaattta gcctttaaac aagatatttt tagcgtagat
    20941 gaaaatttaa aacaactctt aaacaataaa ctcaagctcg acaaaaacga aaaaaacata
    21001 ctcatacacg taggttcaag tgtagaaaat aaaatctatc ctaaaaccaa acttgctata
    21061 ctttgcaaac ttttaatcaa tgaatttcaa caagcaaaaa tttggctcgc ttggggaaat
    21121 gtaaaagaat acgaatttgc taaagaggtt ttaaatctta gtggtattga tgaaacacat
    21181 atagaattag cgccaaaatt caatcttgaa gaactaatgg cttttacaaa aatgatggat
    21241 cttatcatag gaaatgatag cggcccaaca catttggctt ttgctttaaa taaggcatct
    21301 attacgattt ttggtgcaac accaagctac cgcaatgctt ttcaaactca tatcaataaa
    21361 atcattgatg caggtaaaaa aatccaaaat accaagcata tcgataaaag tgatttttgt
    21421 atcacgcgta tagaagaaga agatatcttc aaacttgcca aaggcttact taatgaaaaa
    21481 tagtgataga atatatctta gtctttatta tattttgaaa ttttttgtta cttttatgcc
    21541 tgagtgtatc ttgcattttt tagctttgat tgtagcaaga atcacttttt atcttaacaa
    21601 aaaacatcgc aagatcatcg atacaaattt gcaaatctgc ttccctcaat acactcaaaa
    21661 agaacgcgat aaactatctt tgaaaattta tgaaaatttt gctcaatttg gaattgattg
    21721 tttacaaaat caaaacacca ccaaagaaaa aattctcaat aaagtaaatt ttatcaatga
    21781 aaattttctt atagacgctc tagctttaaa gcgtcctatt atcttcacaa ctgcacacta
    21841 tggaaactgg gaaattttaa gccttgctta tgcagctaaa tatggtgcga tttccatagt
    21901 gggaaaaaag ttaaaaagtg aaattatgta tgaaatttta agccaaagtc gtactcaatt
    21961 tgacatagag cttattgaca aaaaaggcgg tataagacaa atgctaagcg ctctaaaaaa
    22021 ggagcgagct ttgggaattt taactgatca agactgcgta gaaaacgaaa gcgtaagatt
    22081 aaaatttttt aacaaagaag tgaattatca aatgggagca agccttatcg cacaaagaag
    22141 caatgctttg atcatccctg tttatgccta taaagaagat ggtaaatttt gcatagagtt
    22201 ttttaaagca aaagattctc aaaatgcaaa cttagaagaa ctgacacttt atcaagcaca
    22261 aagttgcgaa gaaatgatta aaaaaagacc ttgggaatac ttttttttcc atagacgctt
    22321 tgcaagttat aatcaaggaa tatactcatg aatatttcaa tagtaatact aacttttaat
    22381 agccaaaaat atcttcaaga agtattgcaa agtgttaatt ttgccaatga aattatttta
    22441 atagatagcg gaagcacaga tgatagtcta ataatagcaa aagcttttaa aaacatcaaa
    22501 atttttcatc aagattggct tggttttgga aagcaaaaac aatttggagt tgaaaaagca
    22561 actaatgatt ggatatttgt tttagatagt gatgaagttt ttactgaaga attaaaagag
    22621 gaagtattgc aaataattaa aaatccatca tttaaagcat acaaagtagc aagattaaat
    22681 tttttctttg gagaagcaat aacaaaaatg gggctatatc ctgattataa cataagacta
    22741 tttcataaaa aatatgccaa atttaatgaa agagaagttc acgaaagcat aatctgtcaa
    22801 gaaaaaatag ggaaattaaa acatcatttt ttacattatg cttatgaaaa tatcgagcaa
    22861 tttatagata aacaaaacaa atactcaagt ctaaatccta aaaaaaataa ccttcttaaa
    22921 gctttaataa atccttattg gacttttttt aaactttatt ttgtaaaatt aggtttttta
    22981 gaaggcaaaa gaggttttat catagcaaag ctttatgcac aatatacttt ttggaaatat
    23041 attaaatagg agtgcaacaa tgaaaggcat tattttagct ggaggtagtg gaactagact
    23101 ttatcctagc acattaactt tatgcaagca acttttacct atatacgata aaccaatgat
    23161 ttattatcct atgtctgttt taatgcttgc aaaaattaaa gaagttttga ttatttctac
    23221 tccaaaagat attgatagat ttaaagagct attcaaagat ggttcttttc ttggaatgca
    23281 aattcagtat aaaattcaag agcgtccaga aggtttagcg caaggactta ttttggcgca
    23341 agattttatt caaaatgatg atattgcatt aattttagga gataatattt tttacggaca
    23401 aggctttagt gatattttgg aaaatgcaaa agatgactta aaaaaagggt ttgctagtat
    23461 tttttcttat catgtaaaag atccagaaag atttggagtg gtagaaatgg atcaaaatgg
    23521 aaatgtttta agcctagaag aaaaacccaa aaatccaaaa agcaactatg tggcaactgg
    23581 tttatatttt tataataatg acgctataga tattgcaaaa aatataaaac caagtgcaag
    23641 aggagaactt gaaataacag atgtaaatat agaatattta aggttaaata agctaaaatc
    23701 acaacattta ggaagaggtt ttgcttggat tgacacagga actcacgata gtcttataga
    23761 agctagttcg tttgtgcaaa ccatagaatt aaggcagggt tataagattg cctgcttaga
    23821 agaaatagcc tacaataaca actggataga taatgaaacc ctagaaaaaa gagcattgtt
    23881 actttcaaaa agtaattatg gtcaatattt atataaaata cttagtcaag gaaaataatg
    23941 tatattttag ttactggcgg agctggtttt ataggtagta attttttatt atattttttt
    24001 gagaaaaatc cagatgctaa aattataaat ttagattttt taacatatgc tagcaatata
    24061 tcaaatttaa ataaa
//
LOCUS       DAPWGO010000017        23771 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.018, whole genome shotgun sequence.
ACCESSION   DAPWGO010000017 DAPWGO010000000
VERSION     DAPWGO010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23771)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23771)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23771
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.018"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..597
                     /locus_tag="RJ336_000588"
     CDS             <1..597
                     /locus_tag="RJ336_000588"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213056.1"
                     /translation="NLMIANTKDPHEMFFKWLSFNGIYSIKPNFKIEHRYTKAQNGYI
                     MPDISKELYLDLLNLRDKFDTKKLDKFIYFFQKVTKKYCKEKLTDSVYFSAKSRIKNH
                     LAYQFGLTMIQYSRNILGYVKMPFILFQTFRQYQNKKKEYYERISENPKFILPKIKEY
                     ADYQEAIKLKESITYRLGQALIQANKNWYGGGVYQVAI"
     gene            624..2696
                     /locus_tag="RJ336_000589"
     CDS             624..2696
                     /locus_tag="RJ336_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HDZ5213057.1"
                     /translation="MIKERFLSSFKISREYSYLYIFCYKFFSRIKDSDVFVGWGRKKS
                     GLKAMNLAKKHKARFILLEDGFIRSLNLGVENSPSFSIVKDDIGIYYDATVPSKLENL
                     LNTYEFKDKETKQAKKAIELIKKYKISKYNNNLDIPDDYFQKDEKRVLIITQTANDAS
                     LEFGLAKGFKTVDMIKDAIKENPKSKIYIKIHPDVLSGKKQSDLDINSLPKECILITE
                     NFNPVVLLEFFDKVYTKTSGMGFEALMQECECICYGMPFYAGWGLTKDKLECKRRMQK
                     RSLEEVFYAAYILYAEYFNPYLNQKSNIFDTIQTLAKYKDIEKANSNRLFFFGFSKWK
                     RKFVKPFFIAKNNEIIFLDFLDCLKNIQLKENDKFFIWGKRIDYNALKTTLIKKAQDE
                     NLLHFTPKISLVEDGFIRSISLGSDLTRPFSLIVDDKGLYIDPNKASKLEELLQNEIF
                     DENMLNRAKNIIKILLENRFSKYNGLKHENLKINAKTGQKIILIPAQVEDDASMILGG
                     FGLSTLDLLKEVRSKNQDAYIIFKPHPDVLSGNRVGLKDETLILEFCDEIVKDCSIDS
                     AIKIADEIHTITSTSGFDALLRAKKVFTYGMPFYAGWGLTKDKYRCERRTRKLSLEEL
                     VAGALIAYPRYINPKTKTLCEIEVCLDIMLNLQKDYFSKKYIKLVIDFKTFMLRKIRR
                     FYEFLAKK"
     gene            2693..3877
                     /gene="kpsS"
                     /locus_tag="RJ336_000590"
     CDS             2693..3877
                     /gene="kpsS"
                     /locus_tag="RJ336_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide modification protein
                     KpsS"
                     /protein_id="HDZ5213058.1"
                     /translation="MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAIKMKKKQTKVFKL
                     NFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKIDAILMYNDCRIIHAKAIKVAKE
                     LGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
                     MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIY
                     NLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRG
                     YKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTK
                     VCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFL
                     DK"
     gene            3950..5071
                     /locus_tag="RJ336_000591"
     CDS             3950..5071
                     /locus_tag="RJ336_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF829 domain-containing protein"
                     /protein_id="HDZ5213059.1"
                     /translation="MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHVFNIKVDLSKIE
                     KNEQFPFFQISCEGVQTKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIK
                     FGKESIYQLITGYYPFFYVLFSLLFSLVLAFGSFAFLQNYMHFSLAIIIGCFLGFLLN
                     HFLFKLGKKLAVFWIARICAFCATWQDKKTGTMQERIKLFANTIVDKLKQNENKQDYE
                     LVLVAHSVGTIVCIEVLECILRQNLDLSLLRKLKILTLGECIPLVSYQKKADEFRKKL
                     EFVSRFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKI
                     KRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI"
     gene            5068..6429
                     /locus_tag="RJ336_000592"
     CDS             5068..6429
                     /locus_tag="RJ336_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HDZ5213060.1"
                     /translation="MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYV
                     KMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRE
                     LLRPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAIIEVDEAMTFITADVIFRTIMS
                     SKLDEEKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDRKRAKAGDVIRQVLS
                     DIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSL
                     TWTLYLLSLYPKEQEKAYEEITQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFF
                     AREAKKDTQVRDKLIKKDSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPF
                     GVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSK
                     REL"
     gene            6426..6845
                     /locus_tag="RJ336_000593"
     CDS             6426..6845
                     /locus_tag="RJ336_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213061.1"
                     /translation="MKRVRTKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLG
                     YLFIVIIGIFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVI
                     KITDFFQKDHCKRANKREQPVVDFILSRNLDKQTIGK"
     gene            complement(6846..7193)
                     /locus_tag="RJ336_000594"
     CDS             complement(6846..7193)
                     /locus_tag="RJ336_000594"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HDZ5213062.1"
                     /translation="MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLA
                     GLWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSIS
                     HDNGFAIAIVAVV"
     gene            complement(7193..7729)
                     /gene="fliL"
                     /locus_tag="RJ336_000595"
     CDS             complement(7193..7729)
                     /gene="fliL"
                     /locus_tag="RJ336_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HDZ5213063.1"
                     /translation="MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSS
                     SSDESEVKEAPKEEAKTDKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVK
                     CTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINE
                     ILTDGFIKNVYFTDFVVS"
     gene            7851..9221
                     /gene="pgmL"
                     /locus_tag="RJ336_000596"
     CDS             7851..9221
                     /gene="pgmL"
                     /locus_tag="RJ336_000596"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase PgmL"
                     /protein_id="HDZ5213064.1"
                     /translation="MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVS
                     VGYDARYSANELFNYLVSGLNKAGIKIYDIGLAPTPLGYFSLYEGLKFDANVMITGSH
                     NPKDYNGFKITINKESFFGVELKEFSKEVYKHLNDDIEENLEVEKYDILSLYVKFICE
                     QFSFLKDFNYKFGVDCTNGAAGVVIEPLIKALNLKAHVMFAEPDGQFPNHAPDPTEEE
                     NLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTHVFCGDELCYLFAKNIPNPRILGE
                     VKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDG
                     IYAFLRALELVYKGFDLESMIRALPKLYTTPEIKIPVNEEEKFKLVEEFQKEIEKGAL
                     KGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESMVFTLFDDI
                     KARFKN"
     gene            9269..9646
                     /locus_tag="RJ336_000597"
     CDS             9269..9646
                     /locus_tag="RJ336_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 domain-containing protein"
                     /protein_id="HDZ5213065.1"
                     /translation="MKKILVLLTLCAFAFGASECDKKIDRINKEISFSKAHNDTARTL
                     SLELALKQVQNDCTKDPMFYDKKLEAKKLKEQEVEKIEKELDALKEQKDYMSKAEYKA
                     KKEALKEQKEKIKKEIKEYIDNL"
     gene            complement(9677..10003)
                     /gene="rsfS"
                     /locus_tag="RJ336_000598"
     CDS             complement(9677..10003)
                     /gene="rsfS"
                     /locus_tag="RJ336_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDZ5213066.1"
                     /translation="MQERIDLIVKILDEKKAENIKTIDMSEQEYFVKYVIIAATLGER
                     HALSLIDELKTRLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLEN
                     LKKGRV"
     gene            complement(10031..10576)
                     /gene="nadD"
                     /locus_tag="RJ336_000599"
     CDS             complement(10031..10576)
                     /gene="nadD"
                     /locus_tag="RJ336_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HDZ5213067.1"
                     /translation="MKIALFGGSFDPPHNGHNSVVLEALEKLDIDKLIIMPTYINPFK
                     QSFSADEKQRFLWVKKLWGHLPKVEICDFEIRQKRPVPSIESVKYLYKLYNPSKFYLL
                     IGADHLEKLHLWHDFEKLNSLVEFVIANRNDIEIPKNFKDLKTDKKIASSFIRNTLNT
                     NEVCEEIKDEVKKYYEKLQKN"
     gene            10636..11634
                     /gene="gap"
                     /locus_tag="RJ336_000600"
     CDS             10636..11634
                     /gene="gap"
                     /locus_tag="RJ336_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDZ5213068.1"
                     /translation="MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYL
                     FKYDTVHGEFKGSVDSEGDDLVVNDKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLT
                     MAKSQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCR
                     VLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVM
                     PELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAATTNLKGILMVDDD
                     ERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA"
     gene            11637..12839
                     /locus_tag="RJ336_000601"
     CDS             11637..12839
                     /locus_tag="RJ336_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDZ5213069.1"
                     /translation="MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIP
                     TIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIIMAKDVIGEDAKT
                     KAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAI
                     TKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDK
                     LIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPAC
                     SQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKG
                     SIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVK
                     ALRSKENE"
     gene            12836..13507
                     /locus_tag="RJ336_000602"
     CDS             12836..13507
                     /locus_tag="RJ336_000602"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDZ5213070.1"
                     /translation="MIFAANLKCNHTRASFKIYAEILNKTMGAKCDDIIVFPPSVAFL
                     ENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEALIKAKF
                     DFAKEHGYKIVFCIGENLDTKNLGKTLEFLKKQLEIIDLNYEKLIIAYEPIYSIGTGV
                     SAQATDIAKVLEFLASLTRVPLLYGGSVNENNIKEILSVKHCGGVLIGSAALKVENFI
                     KLIKG"
     gene            13511..14335
                     /gene="fabI"
                     /locus_tag="RJ336_000603"
     CDS             13511..14335
                     /gene="fabI"
                     /locus_tag="RJ336_000603"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HDZ5213071.1"
                     /translation="MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALK
                     KRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENS
                     FLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVA
                     KAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNV
                     SIEDVGNSAMYLLSDLANGVTGEIHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG"
     gene            14339..15832
                     /locus_tag="RJ336_000604"
     CDS             14339..15832
                     /locus_tag="RJ336_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HDZ5213072.1"
                     /translation="MTKLSNEELKNILEGRIKKLENSILKEDKVVNEESVKILAKHLS
                     LGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHE
                     TLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKA
                     KAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDVNIIATLSFFAL
                     FGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKVGCKG
                     PYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEE
                     LKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYAFIEQ
                     NFDENPMPSKDFWKYLEISFILVKGEFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAE
                     KPKLDVSKSFRMTLIYLCGGLDFEGIAYSILKAFEDNIIKISSLKAS"
     gene            complement(15829..17670)
                     /gene="feoB"
                     /locus_tag="RJ336_000605"
     CDS             complement(15829..17670)
                     /gene="feoB"
                     /locus_tag="RJ336_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HDZ5213073.1"
                     /translation="MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAK
                     TFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSA
                     ELLSLNKKMLLALNMCDEAKKEGIELDTSILSQEFQSQVVEISAKTKENLELLLQKII
                     ILFESKFIPRSQFYTPLCEKTPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIH
                     KFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNALGEFVKNNISNTFIASALADGI
                     IAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGF
                     GCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGI
                     YILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWHLVWFMVYNKAKMYLKKAG
                     TFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKGIEPIFKPLELDWKL
                     SVSLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIY
                     NPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLHIAKILLN"
     gene            complement(17667..17891)
                     /locus_tag="RJ336_000606"
     CDS             complement(17667..17891)
                     /locus_tag="RJ336_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HDZ5213074.1"
                     /translation="MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSS
                     LKNATIMVELDTSCVILRSDEAKTIEVNLI"
     gene            complement(17973..19313)
                     /locus_tag="RJ336_000607"
     CDS             complement(17973..19313)
                     /locus_tag="RJ336_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HDZ5213075.1"
                     /translation="MFYSEILADFIFNLKYENIPNTVVQRAKELMLDSLGTAIAASKE
                     ECVLNAFKAFENLSTEKNTPIWVNDQKLDPIYAAMLDGIASHALDFDDTHTEAILHAS
                     AILTPLCLSYGFHVSKDAKKIIKAFIIGWEIAARVGIASKGTFHKRGFHTTAIAGIFG
                     SVSASAILLDLNKEQIINALGLAGSFASGINEFLSNGSNSKVLHIANTVKNGIMVAHF
                     AKNNMSGPLSIFEGRDNIFKCFGIEEECDKTELSKALGEIWQTMQVSIKPYPSCHFAH
                     GLIDCAIALKNDGLKADEIKSIHCFVDEVPISFICDPLEAKYTPNSAYEAKFSMPFLM
                     ALGFFDGKITLESYKNLKREEVLEFAKKISYEKRKSQGFPKYFPGHLEASLQDGRIIQ
                     KDVFINKGNFDNPLSFEELKAKFLANAQIYLDNAKANKILDQIINLENLNHFSF"
     gene            complement(19322..20689)
                     /locus_tag="RJ336_000608"
     CDS             complement(19322..20689)
                     /locus_tag="RJ336_000608"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDZ5213076.1"
                     /translation="MTGISVFDHRLLADSWSTQEMRAIFCEQNRIQKWLDVEAALAKA
                     QAKLKIIPKKAADEIAKKAHYKFMDMDFIFAEFKKTKHPLVPTVRGLEKACDNNLGEY
                     VHFGVTTQDIIDTGLVLQFKEAMTLVKSELKAIAKALAKLAKTHKNTAMMGRTLALQA
                     LPITFGHKVAIWLSELERHFERILELEKRLYVGSIVGAVGTKASLSDECNEVEKLTLE
                     NLGLDVPNISWQPARDRFIELGFVLGNINATFNKIAHEILILSHNEIDEVAEPFGKGQ
                     VGSSTMPHKRNPAVSENAVTISNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMF
                     LMLSVVLANMKFALSDLEVKKDKMLKNLNTLNGFVLAERVMFALSDHYGKQHAHEIVY
                     ENAMLGIEKQKTFKEVLLADKRVSKVLKEKEIDALLDATTYVGYAPKLVDEFLAKIKN
                     SAILK"
     gene            complement(20699..21862)
                     /locus_tag="RJ336_000609"
     CDS             complement(20699..21862)
                     /locus_tag="RJ336_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HDZ5213077.1"
                     /translation="MNSKTKLIHCGRGDQGAEVRSVNPTLMRASTILFKDHATWQKYR
                     ELRKTDRVLSYGARGTTTNFELEKLICTLEGGYRAQLFPTGLAALAMVLLNYASKDAH
                     FLITDAIYGPVRTICELFLDKMGVEIDFLKADASDVEEKIKPNTKLILCESPGSILYE
                     VIDLPKLCKIAHAHNIPVAIDNTYSSGYFLNPLELGVDISVIAATKYLSGHSDVTMGI
                     VVINEKEWKNFDKLPEALGFTTSPDDAYLVLRGMRTLDVRMKAHEKSADEIVEFLQSR
                     KEIKTIFYPKLKSHPNHEIFMRDHKGANGMITIEFTEGYSKDDAIKFVDKLEYFSIGA
                     SWGGYESLATVTTPPRTATDWSARGPFVRFHIGLEDTKDLIADLTQAFDSIKK"
     gene            complement(21875..23314)
                     /gene="dcuC"
                     /locus_tag="RJ336_000610"
     CDS             complement(21875..23314)
                     /gene="dcuC"
                     /locus_tag="RJ336_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
                     /protein_id="HDZ5213078.1"
                     /translation="MLGIVFSLFSVFLLVFMLYKKINAHMALLLSGLLLLSLAALFGL
                     SPHIVTKGSLNLGFFDIFQVFNQTMSSTLAGLGLTLMTIAGFSAYMDHVGASYALFKV
                     FEKPLKAVKSPYVLLIVAYFIVQFLVLFIPSHAGLALLLMVTMYPILVRSGVSKLSAL
                     SVIAICQYIDHGPGSGNVIMASKVAEVDPAIYFVHYQLPTTLPIIIAVGIAIYLCNKF
                     FDKKDNFVFNAQEIEKELNENEGKEKELKKPPRIYAILPIIPLVLILGFSSVLDSILV
                     LMGISSAEEVKAVASTAIKMNVPVAMVISTFVAIIFEMIRYKSIVETLNSIMIFFKGM
                     GHLFVITVSLIVCGQVFASGLLSVGFVDTLIEFCKNAGFGVLAIIIAVSILLAVCAFL
                     MGSGNAAFFSFAPLIPNIAKHFGVETITMIAPIQIMTGFGRCVSPIAPAILAISAIAK
                     VSPFAVVKRTAIPMLVAAIVNVIMTYIYL"
     gene            complement(23318..23680)
                     /locus_tag="RJ336_000611"
     CDS             complement(23318..23680)
                     /locus_tag="RJ336_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDZ5213079.1"
                     /translation="MSNYPKAIGPYSAYREANGLLFISGQLPINPASGEIESSDIKEQ
                     TKQSLKNIGAILEENGISYDKVIKTTCFLADINDFVAFNEIYAEFFKAPYPARSAFAV
                     KDLPKKAKVEIEIIAQKG"
BASE COUNT         8220 a         3373 c         4069 g         8109 t
ORIGIN      
        1 aatttaatga ttgcaaatac aaaagatcca catgagatgt tttttaaatg gttatctttt
       61 aatggtattt actctattaa gccaaacttt aagatagagc atagatatac aaaagcgcaa
      121 aatggataca ttatgccaga tatatcaaaa gagttatatt tagatttatt aaatctccga
      181 gataaatttg atactaaaaa acttgataag tttatatatt tttttcaaaa agttacaaaa
      241 aaatattgta aagaaaaatt aactgatagt gtatatttta gtgccaaatc aaggataaaa
      301 aatcatttgg cttatcaatt tggtttgacg atgattcaat attcaagaaa tattttagga
      361 tatgttaaga tgccatttat attatttcag acttttaggc aatatcaaaa caaaaaaaaa
      421 gaatattatg aaagaatttc tgagaatcct aagttcatat tgcctaaaat aaaagagtat
      481 gcagattatc aggaagcgat aaaattaaaa gaaagtatta catatagact agggcaggct
      541 cttatacaag ccaacaaaaa ttggtatggg gggggggtat atcaagttgc tatttgaaat
      601 taggaggtta aagaaggaat attatgataa aagaacgatt tcttagctcg tttaaaattt
      661 caagggagta ttcttattta tatatatttt gttataaatt ttttagtaga ataaaagact
      721 cagatgtttt tgtgggatgg ggacgaaaaa aatcgggttt aaaagctatg aatttagcta
      781 aaaaacataa ggctagattc atactcttag aagatggatt tattcgctca ttaaacttag
      841 gggttgaaaa tagcccaagt ttttctatag ttaaagatga tataggtatt tattacgatg
      901 caacagtgcc ttcaaagctt gaaaatcttt taaatactta tgaatttaaa gacaaagaaa
      961 ccaaacaagc taaaaaagct atagagctta tcaaaaaata taaaattagc aagtataata
     1021 acaatcttga tattccagat gattattttc aaaaagatga aaaaagggtt ttaatcatca
     1081 ctcaaacggc caatgatgcc tcgcttgaat ttggacttgc taaaggtttt aaaaccgtcg
     1141 atatgataaa agatgccata aaagaaaatc ctaaatctaa aatttatata aaaatccatc
     1201 ccgatgtttt aagcggtaaa aaacaaagtg atttagatat aaattccttg cctaaagaat
     1261 gtattttaat cactgaaaat tttaatcccg tagtcttgct tgagtttttt gataaggttt
     1321 ataccaaaac ttctggtatg ggttttgaag ctttgatgca agaatgtgag tgtatttgtt
     1381 atggtatgcc tttttatgca ggttggggtc taacaaaaga taaattagag tgtaaaagaa
     1441 ggatgcaaaa aagaagttta gaagaagttt tctatgctgc ttatatactt tatgctgagt
     1501 attttaatcc ttatttaaat caaaaaagta atatttttga tactattcaa actttagcaa
     1561 aatataaaga tatagaaaag gcaaattcta atagactttt tttctttgga ttttcaaaat
     1621 ggaaaaggaa atttgtaaaa ccttttttta tagctaaaaa caatgaaatc atatttctag
     1681 atttcttaga ttgcttaaag aatatacaat taaaagaaaa tgataaattt ttcatttggg
     1741 gtaaaaggat agattataac gctcttaaaa ctactcttat aaaaaaagcg caagatgaga
     1801 atttgctcca ttttactccc aaaatttctt tagttgaaga tggatttatt cgctcaatct
     1861 ctttaggttc tgatcttacg cgcccttttt ctttaatcgt tgatgataaa ggactttaca
     1921 tagatccaaa taaagcaagt aaattagaag agcttttgca aaacgaaatt tttgatgaaa
     1981 atatgctaaa tagggcaaaa aatattataa aaatcttact tgagaaccgc ttttcaaaat
     2041 acaatggctt aaagcatgaa aatttaaaaa tcaatgccaa aacagggcaa aaaattattt
     2101 taatccctgc tcaagttgaa gatgatgctt cgatgatttt agggggtttt ggcttatcta
     2161 ctcttgattt gcttaaggag gtgcgttcta aaaatcaaga tgcttatatc atctttaaac
     2221 cccatcctga tgtgttaagc ggcaaccgtg taggtttaaa agatgaaaca ctcatcttgg
     2281 aattttgtga tgagattgta aaagattgca gtattgatag tgctataaaa attgctgatg
     2341 aaattcacac tattacttct acaagtggtt ttgatgctct tttaagagct aaaaaagttt
     2401 ttacttatgg tatgcctttt tatgcgggct ggggtttaac aaaagataaa tatagatgcg
     2461 aaagaagaac aagaaaacta agcctagaag agcttgtagc aggtgctttg atagcatatc
     2521 caagatatat aaatcctaaa acaaaaactt tatgtgaaat tgaagtttgt ttagatataa
     2581 tgctaaattt acaaaaagat tatttttcaa aaaaatatat aaaattggta atagatttta
     2641 aaacttttat gcttagaaaa ataagaagat tttatgaatt tttagcaaag aaatgagatt
     2701 tagcactaaa attaaaaaag aatttagcgg taaaaatgtt ttactcttgc aaggacctgt
     2761 gggaaatttt tttcatcatc ttgcaataaa aatgaaaaaa aaacaaacca aagtttttaa
     2821 actcaatttt aacggtggag attttttttt ctatcctagt ggaacgaggt gtaagtgcga
     2881 tgaaaaagat cttgaaaatt tctatagaga tttttttcaa agcaaaaaaa tcgatgctat
     2941 tttaatgtat aatgattgtc gtattatcca tgctaaggct attaaagtgg ctaaagaatt
     3001 aggaattgaa atatggattt ttgaagaagg atatttaagg ccttattgta ttactttgga
     3061 aaaagatggg gtgaatgcaa attcttcttt accgcgtgat aaaaattttt atctttctca
     3121 aaatattttt accaaagaaa gcataaaaga aattccaggt ggatttaaat ttatggcttt
     3181 tgatgctttt ttgtattggt tgtttgcttt tattttggct ccatttttta acaacaaact
     3241 tcatcatcgc actttatatc cttttgaatt tttattttgg tttagatcat tgtatagaaa
     3301 gtatctttat aagattacag aaaaaaaact aaatgaaaag atttataatt tagaaaaaaa
     3361 gtactttttg gcgattttac aagtttatag cgatacgcaa attaaatatc attacaaaaa
     3421 aagcatagag cactttatag aggaaaccat actttctttt gcaaaccatg caagagctaa
     3481 atcttatcta gtttttaaac accatcccat ggataggggc tataagaatt attctaaact
     3541 cataaatgat ttaagtcaaa aatatcatgt agaaggaagg gttttatatg ttcatgatac
     3601 ccacttgcca gttcttttaa gaaaggcttt gggttgtatt actataaatt caacagtagg
     3661 ccttagtgct attttagaag gctgtccgac taaggtttgt ggcaatgctt tttatgattt
     3721 tgaaggctta tcttatccaa aaaaacttca atttttttgg cgtgaagctc atgcttataa
     3781 acccaatcct gttttggtat gtaattttaa aaaatatctt ttacaaacta atcaattcaa
     3841 cggcaatttt tataaaaatt tctttttaga caaataagac taaaaagctt tgattaagag
     3901 agcttttaaa gcaaagttgt tataattaaa agcaaaaaga aattattgta tggataggga
     3961 agtattttat atagcaggat atgatcctaa aagttataga ttttattatg atttatttaa
     4021 aaaaaaccta aaagattatt ctcatgtttt taacattaaa gttgatttaa gtaaaattga
     4081 aaaaaatgag caatttcctt tttttcaaat ttcttgcgaa ggagtacaaa ctaaatatca
     4141 ttttttaaca tggaatgata ttgttaagaa aaattggtca gaaaattata aagatgcttt
     4201 ggcagattgt tatagttttt ttagaattta tactatcaca gggcttttta tcaaatttgg
     4261 caaagagtcg atttatcaac ttatcacagg ttattatcct tttttttatg tgttattttc
     4321 tttactattt tctttggttt tggcttttgg aagttttgct tttttgcaaa attatatgca
     4381 tttttcttta gctattatca taggatgttt tttaggattt ttactaaatc attttttatt
     4441 taaattaggt aagaaattag ctgtattttg gatagcaaga atttgtgctt tttgtgctac
     4501 ttggcaagat aaaaaaacag gcactatgca agaaagaatc aagctttttg cgaataccat
     4561 agtagataag ctaaaacaaa atgaaaataa acaagattat gaacttgttt tagtagcaca
     4621 tagtgttgga actatagttt gtatagaagt tttggagtgt attttaagac aaaatttaga
     4681 tttatcttta cttcgtaaat taaaaattct tactttagga gaatgcattc ctttagtgag
     4741 ttatcaaaaa aaagcggatg aatttagaaa gaagcttgaa tttgtttcaa ggtttgattt
     4801 aaaatggtat gattacacat cgattattga tggagcatgt tttcctcaag tggatttttt
     4861 ccgcacgagt ggcgtaaatg ctaaatttac acccccattt ttaagtgcta aatttcacac
     4921 tttatatgaa aaacatgagt ataaaaaaat aaaaagagat aaaaacaaag cgcacttttt
     4981 atatctttat agtattagtg ttaaaggtga ttatgatttt ttttctttca tcataatgcc
     5041 taaattttta gaagaaaagg taaaaatatg agtgaatgtc ccttttttcc aaaaccttat
     5101 aaaaataagg cttctacact tttaactttt ttgttaaagc gtagatcttg gcttgacggg
     5161 ctttatgagc gtagttataa aatgcaaaca ggctatgtga agatgccaaa ttttgatctt
     5221 tatgtcataa atgacactaa agaagttaaa agaatgatgg ttgatgaagt tagagaattt
     5281 cctaaaagtg catttttgca tgagctttta agtccgcttt taggagagag catttttact
     5341 acaaatggtg aagtttggaa aaaacaaaga gagcttttgc gtccaagttt tgaaatgact
     5401 cgtatcaata aagtgtttaa tcttatgagt gaagctgtgg cagatatgat ggatcgtttt
     5461 agcaagtatc caaatcatgc tattatcgaa gtagatgagg ctatgacttt tattaccgct
     5521 gatgtgattt ttcgcaccat tatgtcttca aaactcgatg aggaaaaagg taaaaaaatc
     5581 ttaaatgcct ttgtgacttt tcaagagcaa agtgtgcata cagccatgcg tcgtatgttt
     5641 cgttttccaa aatggctttc ttatgtatta ggagatcgta agcgtgctaa ggccggagat
     5701 gtgattaggc aggttttaag tgacatcata aaaccaagat atgatatggc agataatgca
     5761 gaatttgaag atattttagg atctttgctt ttagtagtgg atgcggatac gaataagcgt
     5821 ttttcttttg aggaaatttt agatcaagtg gctatgcttt ttttagcagg acatgaaacc
     5881 acagcaagtt ctttgacatg gacgctttat ttgcttagtc tttatcctaa ggagcaagaa
     5941 aaagcttatg aggagattac tcaggtttta cagggtggag ccattgaaat ttcgcatcta
     6001 agacagttta aatacttaac aaatattttt aaagaatctt taaggcttta tcctcctgtt
     6061 ggattttttg caagagaggc aaaaaaagat acccaagtta gagataagct tattaaaaaa
     6121 gattctgggg tggtgattgc tccttggttg atacacagac atgaagaatt ttggacaaat
     6181 ccgcatggat ttaatccttc tcgttttgaa ggagaatata aaaaagatgc ttatttgcct
     6241 tttggggtag gggaaagaat ttgtatagga caaggttttg ctatgcaaga agcgattttg
     6301 attttggcta atattttaaa aacttacaaa ctagaacttg aagaaggttt tgtacctgat
     6361 gtagtaggac gtttaacagt gcgttcggct aatggtatga ggataaaatt tagcaaaaga
     6421 gagttatgaa aagagttaga actaaaattc gcgccaattt tcgtcgtcgt gtaaaacgca
     6481 ccttaaaagg aagcttaaaa gaaaaattag cagggactat tctgctttgt gcaatagtac
     6541 ctttagcagt tttaggatat ctttttatcg tgattatagg aatttttttt aataccgcac
     6601 gagcaagaca gggtgttaga gccttagatc attttgtaaa tgcaagcttg tttaatggct
     6661 atgcttggga gagcgtttct tctcatgcgt ggcgtgaaag aaatcgcaaa aaatgggcaa
     6721 ggattgttat aaaaatcaca gatttttttc aaaaagatca ttgtaaaaga gcaaacaaaa
     6781 gagaacaacc tgtggtggat ttcatacttt caagaaattt agacaagcaa actataggaa
     6841 aataatcaaa ctacagccac tatggctata gcaaaaccat tatcatgaga aatacttagg
     6901 gaagtttgag tgatattaaa atcttttgta attttttgag aatattttaa tttaggcgcg
     6961 tttttttcat cttttgatat ttcaatatca aaaaaactgc ataattcaca aattccaaca
     7021 cccaaagcct tgctagcggc ttctttagca gcccaaagac ctgctagagt tgctggattt
     7081 ttaatgagta tttgttcttt tgggcttaga aatttatcca aaaaattttt gccatgtcta
     7141 gaatgaattt tttctatcct agaaatggcg atgatatcac agcctacacg cattaagaaa
     7201 ctacaaaatc cgtaaaataa acatttttaa taaagccatc ggttaaaatt tcattgattt
     7261 ttccaactag ctcatctttt aaacgttctt tgcctttttg tgtacttact tcttcaaagg
     7321 ttttagctgt taatgtacga ataataatat cacgaatcac tgggactttt ttatcaagtt
     7381 caggttttaa aagttcgcta ttttgttcta gttctatagt gcattttaca tatcttgagc
     7441 cgctatcgct aagtaaattt agggtaaaag gatcaagtgg atacatagga cctatattag
     7501 caaaatcact acctcgctga gtaggagctg aaactttagg tttatcagtt tttgcctctt
     7561 cttttggggc ttctttgact tcactttcat cacttgaact gcttgaaata agccaagcaa
     7621 ttactcccat aatactaaga agtaaaacaa aaagtaaaat aacaataata attacaagtg
     7681 aaccgccttt tttctttttc gtttcttcgt tttctaattc ttcatccata aattttcctt
     7741 catttagtga aattaatgta aaattgtagc aaaaatttct tttctatcca aatttgcttt
     7801 agaaaaacga taaatttagg ttaaagaaga gatgaatttg aaggaaaaaa atgttagatg
     7861 tgatttttag agaatatgat ataagaggac tttatggcaa agaactgaat gaaaaaagcg
     7921 ttaaagctat aggtttttgc ttgggacaaa ccatgctaaa taaaggctgt aaaaatgtaa
     7981 gtgtgggcta tgatgcaaga tatagtgcaa atgagctttt taattatctg gtgagtggac
     8041 ttaacaaagc gggaataaaa atctatgata tagggcttgc gccaactcca ttggggtatt
     8101 ttagtcttta tgagggcttg aaatttgatg caaatgttat gataacaggc tctcataacc
     8161 caaaagatta taatggtttt aaaatcacta tcaataaaga aagttttttt ggcgtagagt
     8221 taaaagagtt ttcaaaagaa gtttataagc atttaaatga tgatattgaa gaaaatttag
     8281 aagtagaaaa atacgatatt ttaagccttt atgtgaaatt tatatgtgag caatttagct
     8341 ttttaaagga ttttaattat aaatttggtg ttgattgtac aaatggtgcg gctggagtag
     8401 tgatagagcc tttaatcaag gctttaaatt taaaagctca tgtaatgttt gcagagcctg
     8461 atggacagtt tccaaaccat gccccagatc ctacagaaga agaaaactta agtgcgatta
     8521 gagaattttt aaatcaaaat caagattatt ctttggcttt tgcttttgat ggggatgctg
     8581 atagaatggt tgctttaagt aaaactcatg tattttgtgg ggatgagctt tgttatttgt
     8641 ttgctaaaaa tatccctaat ccacgcattt taggcgaggt aaaatgttct aaaaatcttt
     8701 ttgatgaagt ggctaaattt ggaactattt ttatgggaaa aacaggacat tctaatatca
     8761 aaaaaatgat gaaagaaaaa gatattgatt tagctgctga ggtgagtggg catattttct
     8821 ttaaacatag atattttggt tatgatgatg gaatttatgc atttttaaga gccttggagc
     8881 ttgtttataa aggttttgat ctagaaagta tgattagagc tttaccaaaa ctttatacta
     8941 cacctgaaat taaaattcct gtaaatgaag aagaaaaatt caaacttgtg gaagaatttc
     9001 aaaaagagat tgaaaaagga gctttaaaag gtgttaaaag tctttgtgaa attgatggag
     9061 ctaggataga ttttggcgat ggatgggctt tacttcgtgc atctaacacc agcccttatc
     9121 ttatcacacg ctttgaggca acgtctttag aaagagcaaa agagcttgaa agtatggtat
     9181 ttactttatt tgatgatata aaagctagat ttaagaattg atgagataat atttcgcgat
     9241 ttaaatttat cttaaaaagg aataaaaaat gaaaaaaata cttgttctac ttacgctatg
     9301 tgcttttgct tttggtgcaa gtgaatgcga taaaaaaatt gatcgtatta ataaagaaat
     9361 cagtttttct aaagcacata atgacacagc tagaacttta agtttagaac ttgctttaaa
     9421 gcaagtgcaa aatgattgta ctaaagatcc tatgttttat gataaaaaac tagaagctaa
     9481 aaaacttaaa gaacaagaag tggaaaaaat cgaaaaagaa cttgatgctt taaaagaaca
     9541 aaaagattat atgagtaagg ctgagtataa agctaaaaaa gaagctttaa aagaacaaaa
     9601 agagaaaatc aaaaaagaaa ttaaagaata tatcgataat ctctaaaaat taaaaggcta
     9661 attaaattta gcctttttaa accctacctt ttttaagatt ttctaataat tcttctatat
     9721 tataaattcc tctgtgttct ggtgttaaaa gatggattaa aatatcacca agatcaatca
     9781 cgctccattc ttcactacta tctatgttta aaaattcctc acctttggct ttaagtcgtg
     9841 ttttaagctc atcgatcaaa gatagagcgt gtctttctcc taaagtagct gcgataatga
     9901 catattttac aaagtattct tgctcgctca tgtcaatggt tttgatattt tcagcttttt
     9961 tttcatctaa aattttaacg attaaatcta ttctttcttg cattattttc ctttaatttt
    10021 tgaaattgta tcaatttttt tgtaattttt cataatattt ttttacttca tctttaattt
    10081 cttcgcaaac ttcatttgta tttaaagtat tgcgtatgaa agaagaagcg atttttttat
    10141 cggtttttaa atctttaaaa ttcttaggaa tttctatatc attgcgattg gcaataacaa
    10201 attctactaa agaattaagt ttttcaaaat catgccaaag atgaagtttt tctaaatgat
    10261 ctgcgccaat taaaagataa aatttactag gattataaag cttataaaga tacttaacac
    10321 tttctatgct aggaacaggg cgtttttgcc tgatttcaaa atcgcaaatt tcaacttttg
    10381 gcaaatgtcc ccaaagtttt ttaacccata agaatctttg cttttcatca gcactaaaac
    10441 tttgtttaaa aggattgata taagtaggca taataataag cttatcaata tctaattttt
    10501 ccaaagcctc taaaacaacg ctattatgac cattatgcgg tggatcaaaa ctgccaccaa
    10561 aaagtgctat cttcattaaa attttaacct tttttttgta gaatattagc attatatttt
    10621 gcaaaaggaa attaaatggc tgtaaaagtt gctataaatg gttttggacg cataggcaga
    10681 tgtgttgcaa gaatcatctt agaaagaaat gatattgagc ttgtggcgat aaatgatact
    10741 acggatattg aacttacaaa ataccttttt aaatacgata cagtacatgg tgaatttaaa
    10801 ggcagtgttg atagtgaagg cgatgattta gtggtaaatg ataaaaaaat caaagtattt
    10861 aaaagtcgca atgtaaaaga tcttgacttt gcaaaacacg gcgcacaaat tgttttagag
    10921 tgcacaggag cgcatttaac tatggcaaaa agtcaagaat ttatagatat gggagtacaa
    10981 aaagtgatca tgagtgctcc tgcaaaagat gatactccta cttatgtttt aggagtaaat
    11041 tcagaacttt acaagggtga aagcattatt tctaatgcaa gttgtacaac aaattgttta
    11101 ggtcctgttt gtcgtgtttt acaagataat tttggtatag aaaaaggact tatgacaaca
    11161 atacatgctt atacaaatgg acaaagtatt attgatgcta aagctaaaga taaacgccgt
    11221 tctcgtgctg cagcgcaaaa tatcattcca acttctacag gcgcagcaaa agctatgaaa
    11281 cttgttatgc ctgaacttaa tggcaagctt cacggacaaa gtatgcgtgt gccagtgatt
    11341 gatgtatcaa gcgtggattt aactgcgcag ctaagccgta aagtcagcaa agatgaaatc
    11401 aatgaagctt ttagaaaagc tgcaactaca aatttaaaag gcattttaat ggtagatgat
    11461 gatgaaagag tttcaagcga ttttatcact tgttcttatg gagctattgt agcaagtgat
    11521 ttaactcaag tgattgcgga tgattttatc aaggtaattg cttggtatga taatgaatgg
    11581 ggctattcaa gtcgtctagt agatatggca gtatatattg caaataaggc ttaatcatga
    11641 gtgatattat ttctataaaa gacattgatt tagctaagaa aaaagttttt ataagatgtg
    11701 attttaatgt tcctcaagat gattttttaa atatcactga tgatagacgc ataagatcag
    11761 ctattcctac gataagatat tgtttggata atggttgtag tgtgatttta gcctctcatt
    11821 tagggcgtcc aaaagaaatt agctctaaat attctttaga acctgtggct aagcgtcttg
    11881 ctagactttt agataaagaa attattatgg caaaagatgt tatcggcgaa gatgcaaaaa
    11941 ccaaagctat gaatttaaaa gcgggtgaaa ttttacttct tgaaaatttg cgttttgaaa
    12001 aaggcgaaac taaaaatgat gaaaatttag ccaaagaact tgcttctatg gttcaagttt
    12061 atatcaatga tgcttttgga gtatgccata gagcacattc tagtgtagag gcgattacta
    12121 aattttttga tgaaaaacac aaaggcgcag gatttttact ccaaaaagaa attgattttg
    12181 caagcaatct tatcaaacat ccagcacgtc cttttgtcgc tgttgttgga ggttcaaagg
    12241 taagcggaaa acttcaagca ttgacaaatt tattaccaaa ggtagataaa ttaatcatag
    12301 gcggaggtat ggcatttact tttttaaaag ccttaggtta tgatatagga aattcacttt
    12361 tagaagaaga gcttttagaa gaagctaata aaattcttac caagggtaaa aatttaggag
    12421 taaaaattta tcttccagta gatgttgtag ccgctcctgc gtgttcacaa gatgcaccga
    12481 tgaaatttgt tccagcgcaa gaaattccaa atggttggat gggtttagat ataggacctg
    12541 caagtgtgag actttttaaa gaggtgattt ctgatgcgca aacgatttgg tggaatggac
    12601 ctatgggtgt ttttgaaatt gataaatttt caaaaggtag tattaaaatg agtcattata
    12661 tcagcgaagg acatgcaact tctgttgttg gcggtggcga tacggctgat gtggttgcgc
    12721 gtgcaggtga tgcagatgag atgactttta tttccactgg aggtggtgct tctcttgaac
    12781 ttatagaggg taaagaactt ccaggtgtaa aagctttaag atctaaggaa aatgaatgat
    12841 ctttgctgca aatttaaaat gcaatcacac aagggcaagc tttaaaattt atgctgaaat
    12901 tttaaataaa actatggggg caaaatgcga tgatattatc gttttcccac ctagtgtagc
    12961 atttttagaa aatgaaaata acttcataca aggagcgcaa aatttttatc cttgtgttaa
    13021 tggtgctttt acaggcgagc ttggaaaaga acatttggac gaatttggga tcaaatgtgt
    13081 tttaatcggg cattctgaaa gaagagcttt aggagatgaa gcacttatta aggctaaatt
    13141 tgattttgct aaagagcatg gctataaaat tgttttttgt ataggtgaaa atttagatac
    13201 aaaaaattta ggcaagactt tagagttttt aaaaaaacaa cttgaaatta ttgatttaaa
    13261 ttatgaaaaa ctcatcattg cttatgagcc tatttattct ataggaacgg gagtgagcgc
    13321 acaagctaca gatattgcta aagtgcttga atttttagcg agtttaacta gggtaccttt
    13381 gctttatggt ggaagtgtga atgaaaataa tatcaaagaa attttaagtg taaaacattg
    13441 tggaggagtt ttgataggct ctgcagcttt aaaagtagaa aattttataa aattaatcaa
    13501 aggataaaag atgattatga agggtaaaaa aggccttatt gtaggggttg caaataataa
    13561 atctatcgct tatggcatag caaaagcatg ttttgatcaa ggagccgagc ttgcttttac
    13621 ttttttaaat gatgctttaa aaaaacgcgt agaacctata gcacaagagt ttaattctaa
    13681 ttttgtttat gagcttgatg taaacaataa tgagcattta gattctatcg ctgaaaaaat
    13741 caaaaaagat ttaggcgaga ttgattttgt agtgcatgcg gttgcttttg ctccaaaaga
    13801 agctttagaa aattcttttt tagaaacttc aaaagaagct tttgatatag ctatgcaaac
    13861 ttctgtgtat tctttacttt ctttaacacg tgcggtttta cctattttaa aagataaggg
    13921 ttcgattttg actttaagtt atcttggagg ggttaaatat gtgcctcatt ataatgttat
    13981 gggtgtagca aaagctgcac ttgaaagttc tgtgcgttat ttggcaagag atttaggggt
    14041 aaaaggaatc cgtgttaatg ctatttcagc aggtcctatt aaaactttag cagcaagtgg
    14101 aataggggat tttagaatga ttttaaaata caatgaaatc aattctcctt taaaacgcaa
    14161 tgttagtata gaagatgtag gaaattcggc tatgtattta cttagcgatt tagcaaatgg
    14221 tgttacaggt gaaatacatt atgtcgatgc aggatataac atcatgggta tgggtgatgt
    14281 tgaaaaaaat gaagaagggc aaactgttct ttgttgggat aatcaaaaag gataaaaaat
    14341 gacaaagctt agcaatgaag aattaaaaaa tatacttgaa ggtcgcatta aaaaacttga
    14401 aaattccatt ttaaaagagg ataaggttgt caatgaagaa agtgtaaaaa ttcttgctaa
    14461 gcatttatct ttaggcaatg aaattccagc tcttgctcaa agattttttc aaattgcacc
    14521 taaaacaaag ttagtatggc ttcatctttg tgaatgtaca gggtgtagtg agagtttgtt
    14581 gcgttctgag ttgccaagtt ttgatgagct tatttttgat tttttttctt tagaatatca
    14641 tgaaacttta atggcagcaa atggcactaa agctgaagag cttttagagc atgttttaga
    14701 agaagatttt attttagcgg ttgaaggtgg tgttgcagcc attgatacct tttttcttac
    14761 tataggagca caaggagaga gtggctatga aattttagaa aaactagccg ctaaagccaa
    14821 ggctatcttt gcagtgggta cttgttcaag ttatggtggt attcaagctg cttatccaaa
    14881 tcctagtaaa acctgtggta ttagtgaagt cttaagtcaa aaagtagtaa atatcccagg
    14941 ttgtcctcca agtgatgtaa atatcattgc gactttaagt ttttttgctt tatttggagt
    15001 tttacctgaa cttgatgagc aaaatcgtcc tgtgtgggct tatggtaaat gtttgcatga
    15061 tatgtgtgaa agaaaggcaa aatttgaaag tgggattttt gctgaacatt ttgacgatga
    15121 ggctgcaaag aatggagctt gtttatttaa ggtaggttgt aaaggacctt atacttacaa
    15181 caactgtcct aaagtgaaat tcaatgctaa aacttcttgg ccagtggccg caggacatgg
    15241 ttgtatagcc tgtagtgaga aaaatttttg ggatgagttt gggaattatg aaaagcctat
    15301 ggcaaatatt ttttcttacg ctaaactttg taatgaagag ttaaaacaag aattttttct
    15361 agaagagcaa attaaaattt tagaacaaat agattttgaa tttgaaagca atataaaact
    15421 tattttacaa aatatagcta aaaataaatt aggtgctttg cttgtagaaa attataaaaa
    15481 atcttttgaa aaaaactatg cttttataga acaaaatttt gatgaaaatc ctatgccttc
    15541 aaaagatttt tggaaatatc ttgagataag ctttattttg gttaaaggcg agtttttaaa
    15601 agataagaat gattttttaa ttgcggcaaa aaattacgct tttaaacatg caagtcctta
    15661 tgattttaag ttgaatatga acgctgaaaa accaaagctt gatgtgagta aatcttttcg
    15721 tatgacttta atctatcttt gcggtgggct tgattttgaa ggtattgctt atagcatttt
    15781 aaaagctttt gaagataata ttattaaaat ttcatcatta aaagcaagtt agtttaataa
    15841 aattttagca atatgaagtc ctataaaagc tactatataa gcacttgtgc aggtaaaaag
    15901 aaagagaaag agagtatatt ttagctttcc actttctttt gaaaaaacta tagttgctgc
    15961 aaagcaggga ttataaatca ttacaaataa aataaaagcc actgcacttg gtataggtat
    16021 gtttttagcg ataattcctt ttaaatcatt atttgtttca tctacatctt ttcctagtga
    16081 ataaagtact cccatagttg aaatcattac ttctttagcg gccaaaccac tgattaaaga
    16141 tacacttaat ttccaatcta actcaagggg tttaaaaata ggttctatgc ctttgccaaa
    16201 ttgtcctaaa taactttgtt ctatagctct ttcttgagca ttaaaatcat ttaaattttc
    16261 ttcacttttt ggaaaattac tagcaaacca tatgagcaaa gaggccaaaa gtatgaaagt
    16321 tcctgctttt ttaagataca ttttggcttt attataaacc ataaaccaaa ctaaatgcca
    16381 atttggcata cgatattttg gcatttccat aacaaaaggt tcatcaagtc cacgaaatgc
    16441 tgtcattctt aaaaattttg cagcacaaag tcctaaaatc gcacctaaaa tataaattcc
    16501 aaaaagataa tttcctgctt tttcacttgg aaaaaaagcg ccgataaaaa gcacatatac
    16561 aggaagtctt gccccgcaac tcataaaatt gatcacaaaa agagttaaaa gtctatctct
    16621 tttgttctta agagtgcgtg tagccataaa agcaggtact gaacaaccaa aaccagtgat
    16681 tagtggaata aaacttttgc catgtaaacc aaatttatgt aaaatcccat caagtaaaaa
    16741 agctactctt gacatatagc ctgtggtttc taaaagagct atgcctaaaa ataaaatcat
    16801 tatattaggc aaaaaaagta tcacagcacc aacacctgcg ataatcccat cagccaaagc
    16861 tgaagcgatg aaggtattag aaatattgtt tttaacaaat tcacctaagg cattaaagcc
    16921 tgattctata taatccatag gaatttgtcc taagctaaag gtgagttgaa ataaaagcca
    16981 cattaaaaat aaaaatatag gtaagccaaa gaatttatgg ataagtaagg catcgatttt
    17041 tttggttaaa tttctctctt cttttttatg tgtgataatt ttttttgaaa gttcattaat
    17101 aaaatataat aaatcttctt tttctggagt tttttcgcaa agcggagtgt aaaattgaga
    17161 tcttggaata aatttacttt caaataaaat aataattttt tgcagcaaaa gttctaaatt
    17221 ttcttttgtt tttgctgaaa tttcaacaac ttgactttga aattcttggc ttaaaataga
    17281 agtgtcaagc tctatacctt cttttttggc ttcatcgcac atatttaaag ctaaaagcat
    17341 ttttttatta aggcttaaaa gttctgcact aaggataaga ttgcgttcta aattagtagc
    17401 atctaaaaca ttaacaataa catcatagtc attttgattt aaaaaatgac gtgtgatttt
    17461 ttcttcttcg ctatatccat ctaaagaata agttcctggt aaatcaatga cttcaaattc
    17521 atagtttttg taaaaagttt ttgcacttgc tttttctata gtaactccgc taaaatttcc
    17581 tactttcata ttggctttgc aaagcgcatt aataagaaga cttttgccta cattaggctg
    17641 acctacaagg gctattttga tttttttcat ataagattca cttctatggt tttagcttca
    17701 tcagatctta ggataacaca acttgtatca agttctacca ttatggtggc attttttaaa
    17761 gaggagtgaa tttttttcaa gtttttattt ttaataaatc caaagcttaa aagtctattt
    17821 ttgagttctt tgtgagcgtt taaattgaca ataatagcct tttgtccatc ttttaactcg
    17881 tttaaagtca ttgtaattcc taaattaata ataaatatta taataaaaaa gtgtaatgaa
    17941 attatccttc ttgtaaaaag aaggataaat atttaaaaag aaaagtggtt taaattttct
    18001 agattgatga tttgatctag aattttgtta gctttagcat tatcaaggta aatttgtgca
    18061 ttggctaaaa atttagcttt taattcttca aaacttagtg gattatcaaa attaccttta
    18121 ttgataaaaa catctttttg gattatgcgt ccatcttgca aactggcttc taaatgccct
    18181 ggaaaatatt ttggaaagcc ttgagatttc cttttttcgt aactgatttt tttagcaaat
    18241 tctagtactt cttcacgctt taaattttta taagattcaa gagtgatttt accatcaaag
    18301 aatccaagag ccattaaaaa aggcatggaa aatttagctt cataagcact atttggagtg
    18361 tattttgctt ccaaaggatc gcagataaaa gaaataggaa cttcatctac aaaacaatga
    18421 atacttttaa tttcatcagc ttttaaacca tcatttttta aagcaatagc acaatcaata
    18481 agcccatgag caaaatgaca acttggataa ggcttgattg aaacttgcat agtttgccaa
    18541 atttctccca aggctttgct aagttctgtt ttatcgcatt cttcttctat gccaaaacat
    18601 ttaaagatat tatccctacc ttcaaaaata ctcaaaggcc cactcatatt gtttttggca
    18661 aaatgagcta ccataatgcc gtttttaaca gtattggcaa tatgtaaaac ttttgaatta
    18721 gatccattgg ataaaaactc attaatccca cttgcaaaac ttcctgcaag tcctaaagca
    18781 ttgatgattt gttctttgtt aagatctagt aagattgcac ttgcactcac gcttccaaaa
    18841 attcctgcaa tagcagtagt atgaaaacca cgcttatgaa aagtgccttt gcttgcaatg
    18901 cctactctag ctgcaatttc ccagcctatt ataaaagctt tgatgatttt tttcgcatct
    18961 ttgctaacat gaaaaccata acttaaacaa agtggagtta aaatcgcact tgcatgcaaa
    19021 atcgcttctg tatgcgtatc atcaaaatct aatgcatgag aagcaatgcc atctagcata
    19081 gctgcatata taggatctaa tttttgatca tttacccaaa taggagtatt tttttctgtg
    19141 cttaaatttt caaaagcttt aaaagcattt aaaacacatt cttctttgct tgctgctata
    19201 gctgttccaa ggctatcaag cataagctct ttagcccttt gaacaactgt attagggata
    19261 ttttcatatt taagattgaa aataaaatcc gctaaaattt cactatagaa catgattttt
    19321 cctattttaa gatagcgcta tttttgattt ttgctaaaaa ttcatctaca agttttggtg
    19381 catatcctac ataggttgtt gcatcaagta aagcatcaat ttctttttct ttcaatacct
    19441 tagatactct tttatctgca agtaaaactt ctttaaaagt tttttgtttt tctataccta
    19501 gcatagcatt ttcataaaca atttcatggg catgttgttt tccataatga tcgcttaatg
    19561 caaacataac acgctcggct aaaacaaaac cattaagagt atttaaattt ttaagcattt
    19621 tgtctttttt tacttctaaa tcactaagag cgaatttcat atttgctaaa accacagaaa
    19681 gcattaaaaa catttcaggt aaaagcttcc attccatttt ccaaacttga ccatctcttt
    19741 catgttcatg tctttcaata tcgcttaaaa tggctaaatt tgctttaaag gcattgctta
    19801 ttgtaaccgc attttcgctt actgcaggat ttcttttgtg tggcatagtg cttgatccta
    19861 cttgtccttt tccaaaaggt tcagcaactt catcaatttc attatgcgaa aggattaaaa
    19921 tttcatgagc gattttgtta aaggttgcgt tgatattacc tagtacaaaa ccaagctcta
    19981 taaagcgatc acgtgcgggt tgccaagaaa tattaggcac atcaagtcct aaattttcta
    20041 aagtgagttt ttctacttca ttgcactcat cacttaaact tgctttagtt cctacagcac
    20101 ctactatact acctacataa agtctttttt caagctcaag tattctttca aaatgacgct
    20161 caagttcgct taaccaaata gccactttat gtccaaaagt aataggcaaa gcttgaagtg
    20221 ctaaagttct tcccatcata gcagtgtttt tatgggtttt agctagtttc gctaaggctt
    20281 ttgcgatagc ttttaattca ctttttacaa gagtcattgc ttctttaaat tgtaaaacca
    20341 gtcctgtatc gatgatatct tgagtggtta ctccaaaatg tacatattcg cctaaattat
    20401 tatcgcaagc tttttctaat cctcttacag taggaactaa agggtgtttg gtctttttaa
    20461 attcagcaaa gataaagtcc atatccataa atttataatg agcttttttt gcgatctcat
    20521 cagctgcttt tttagggata attttaagtt ttgcttgtgc ttttgctaaa gctgcttcaa
    20581 catcgagcca tttttgtatg cggttttgtt cgcaaaaaat agcacgcatt tcctgcgtgc
    20641 tccatgagtc tgctagtaat ctatgatcaa atacgctaat tcctgtcatc ttatctcctt
    20701 attttttaat actatcaaaa gcttgtgtta aatcagcaat taaatcttta gtatcttcaa
    20761 gacctatatg aaatcttaca aatggtcctc ttgcactcca atctgttgca gttctaggtg
    20821 gagtagttac ggtggctaag ctttcatatc caccccagct agcaccaatt gaaaagtatt
    20881 ctagtttatc tacaaattta atagcatcat ctttgctata accttctgta aattctatgg
    20941 taatcatacc atttgcacct ttatgatcac gcatgaaaat ttcatgattt gggtgggatt
    21001 tgagttttgg atagaaaatt gttttaattt cttttctact ttgtaaaaac tctacaattt
    21061 catcagcact tttttcatga gctttcattc tcacatctag tgttctcata ccacgaagta
    21121 ctaagtaagc atcatcagga cttgttgtaa agcctaaagc ttctggaagt ttgtcaaaat
    21181 ttttccattc tttttcgttg attactacta tacccatggt tacatcagag tgtccactaa
    21241 gatattttgt agcagcgata actgaaatat ccactccaag ttctaaagga tttagaaaat
    21301 atccactaga ataagtattg tcaatagcta cagggatatt atgcgcatgg gcaattttgc
    21361 aaagttttgg taaatctatg acttcataaa gtatagaacc tggactttca cataagataa
    21421 gcttggtatt aggtttgatt ttttcttcta catcacttgc atcagctttt aaaaaatcaa
    21481 tttcaactcc cattttgtct aaaaataatt cgcaaatcgt tcttacaggc ccataaattg
    21541 catcagtgat taaaaaatgt gcatctttgc ttgcatagtt taaaagcacc atagctaatg
    21601 ctgcaagtcc tgttgggaaa agttgtgctc tataaccacc ctctagagtg caaataagtt
    21661 tttcaagttc aaaattggtt gttgttcctc tagccccata gcttaaaaca cgatctgttt
    21721 ttcttaattc tctgtatttt tgccaagttg cgtgatcttt aaaaagtatg gttgatgcac
    21781 gcataagtgt aggattgact gatcttactt cagcgccttg atcgcctctg ccacaatgaa
    21841 taagtttagt ttttgagttc attttttctc ctttttaaag atagatataa gtcataataa
    21901 catttacaat agccgctaca agcataggaa tagctgttct tttaaccacg gcaaaaggac
    21961 ttacttttgc aatagctgag atagctaaaa tcgctggtgc aataggacta acacatcttc
    22021 caaagcccgt catgatttga attggtgcta tcatggtgat agtttcaact ccaaagtgtt
    22081 ttgctatatt tgggataagt ggagcaaagc taaaaaatgc cgcatttcct gaacccatta
    22141 agaaagcaca aactgcaagc aagattgaaa cggcgataat aatagccaaa actccaaatc
    22201 ctgcattttt gcaaaattct attaaagtat ctacaaaacc tacagataaa agaccgcttg
    22261 caaatacttg accacaaacg atgagtgaaa ctgtgataac aaataaatgt cccattcctt
    22321 taaagaaaat cataatagaa ttaagagttt ctactatact tttatagcgt atcatttcaa
    22381 aaataatagc cacaaaagtt gaaatcacca ttgctactgg aacattcatt ttaatggcag
    22441 tgctagcaac tgctttaact tcttcagcac tacttattcc cattaaaacc aagatgctat
    22501 caagcacgga actaaatcct aggattaaaa ccaaaggaat tataggtaaa atcgcataaa
    22561 ttctaggagg ctttttaagt tctttttctt taccttcatt ttcatttagt tctttttcaa
    22621 tttcttgtgc attgaagaca aaattatctt ttttgtcaaa aaatttattg caaagatata
    22681 tcgcaatacc tacagctata atgataggca aggttgtagg gagttgataa tgaacaaaat
    22741 aaattgcagg atcaacttca gctacttttg atgccatgat cacatttcca cttccaggcc
    22801 catgatcgat atattgacaa atagcaatca cacttaaggc agaaagtttt gaaacaccag
    22861 agcgtacaag tataggatac atagtaacca taagtaaaag tgccaagcct gcgtgagaag
    22921 ggatgaaaag aactaaaaat tgcacgataa aataagcaac tatgagtaaa acataaggag
    22981 attttacggc ttttaaaggt ttttcaaaaa ctttaaaaag tgcataagaa gcccctacat
    23041 gatccatata agcagaaaaa cctgctatag tcataagtgt aagtccaagc cctgctaatg
    23101 tacttgacat ggtttgattg aaaacttgaa aaatatcaaa aaaacctaaa tttaaagaac
    23161 ctttagtgac aatgtgtgga gaaagtccaa aaagagcagc taaggaaagt aaaagtaaac
    23221 cacttaaaag caatgccatg tgagcattga tttttttata aagcataaaa acaagtaaaa
    23281 aaacactaaa taaagaaaaa acaataccta gcatgtttta tcctttttga gcgatgatct
    23341 ctatctctac tttagctttt tttggcagat cttttactgc aaaagcactt cttgctggat
    23401 aaggagcttt aaaaaattca gcataaattt cattaaatgc tacaaaatca ttaatatcag
    23461 ctaaaaagca agtggtttta atcactttat cataactgat accattttct tctaagatag
    23521 caccgatatt ttttaaagat tgtttggttt gttctttgat atcagagctt tctatttctc
    23581 ctgaagcagg gttgatagga agttgtcctg atataaataa aagtccattt gcttccctat
    23641 aagctgagta tggaccaatg gcctttggat agtttgacat gaattctcct ttgttaaata
    23701 tagattaaac agaatgcatt ttatcactac aataataatt tgtcaatagt ttattatcat
    23761 aataataaaa t
//
LOCUS       DAPWGO010000018        23433 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.019, whole genome shotgun sequence.
ACCESSION   DAPWGO010000018 DAPWGO010000000
VERSION     DAPWGO010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23433
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.019"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..712
                     /locus_tag="RJ336_000612"
     CDS             <1..712
                     /locus_tag="RJ336_000612"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213080.1"
                     /translation="GGYIEALINKNLEIKNIKIHFDMINFSQFYTKFVLQNLNYEQFF
                     NNPVQFYELNLFSDSQQQINFDYLVLDNNKINSFYSKNQVNFNEENSTINLNIQGESN
                     EIDIDLKSLLGQNLNFDKTKFNITINKFLNSNFNISHFIQKNLDLKIQNLILEKNKQN
                     ISLQGNLNINNSYQAKLQVISLDEPDEIFPWTKDYGGLNQYFLKENNNFFLNLSYDSL
                     ANPQLKINGSEFSNMDLN"
     gene            712..1893
                     /locus_tag="RJ336_000613"
     CDS             712..1893
                     /locus_tag="RJ336_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDZ5213081.1"
                     /translation="MSLALTFRPENFDDILGQYELIEIFKKFTALQKLPHSIFFGTAG
                     SGKTTFARVVAKEFGLDFYEFDGGNFKLEELRKILDNYKNSLYKPLIFIDEIHRLSKT
                     QQEMLLIPMENYRLILIGASTENPYFVLSSGIRSRSMLFEFKSLGVKELETLLLRVQE
                     KMKFNIDKEAKNFLLKSADARAMLNLLEFVLVLDEKHISLENLKKLRNTISSEGASSK
                     DTHYILASAMIKSLRGSDVDAAIYYLARLIDAGESADFIARRLVIFSSEDVGNADPNA
                     LNLAVSTLEAVKNIGYPEARIILAQCVVYLASTIKSNASYKAINEALNYVKNNEALEI
                     PNYLNNNHQEKQNYLYPHDFGGWVEQKYLSKNLKFYHSKGLGEEAKLLDNLYKLKNHK
                     A"
     gene            1956..2684
                     /locus_tag="RJ336_000614"
     CDS             1956..2684
                     /locus_tag="RJ336_000614"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDZ5213082.1"
                     /translation="MIKIGIYGAKGRMGKQIEECLKSETQAQISILYDKGGNLEELFE
                     KSDVIIDFSSPSGTHELLNYARTMPKPLVIGTTGLDEKILHLMQSASEVMPIFYATNM
                     SLGVAVLNYLASKASQMLKNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEK
                     VRVSGRDGIIGERSKDEIAVMSLRGGDIVGRHTVGFYEDGEFLELNHTATSRATFAKG
                     AIKIAIWLSKQEAKMYSINDFLGI"
     gene            2686..4023
                     /locus_tag="RJ336_000615"
     CDS             2686..4023
                     /locus_tag="RJ336_000615"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDZ5213083.1"
                     /translation="MCAVVGVINSKNASTYAYYALFAMQHRGQEASGISVSNGKNIKT
                     IKAKGEVSQIFNPDNLKTLEGEIAIGHNRYSTAGNSSLNDAQPIAATSVLGDIALAHN
                     GNLVNKEEVRSRLIQDGAIFQTNMDTENVVHLIARSKQESLKDRFIESLKECIGAYCF
                     VLASKDKLYVVRDPHGVRPLSLGRLKDGGYIVASETCAFDLIEAEFIRDVKPGEMLIF
                     TQGNDKFESIELFSQTPRICAFEYIYFARPDSIVEGKSVYEVRKKMGEALAKKFAYKA
                     DFVVPVPDSGVSAAIGFAQYLQIPLEMAIVRNHYVGRTFIEPTQELRNLKVKLKLNPM
                     RKVLEGKEIVVIDDSLVRGTTSKKIISLLRAAGASKIHLAIACPEIKFPDTYGIDTPT
                     FEELISANKNTEEVREYVEADTLSFLSIEELTQSIGDERKYSLISFDGDYFIK"
     gene            complement(4026..5411)
                     /gene="fliI"
                     /locus_tag="RJ336_000616"
     CDS             complement(4026..5411)
                     /gene="fliI"
                     /locus_tag="RJ336_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HDZ5213084.1"
                     /translation="MNLEKLRSKLGKENLSAIFGEITKISATSIEIRGLKTGVGDIVK
                     LVSNENENLNTLAMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGR
                     VVDPFMRPKDGKGAIEVSKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQK
                     LGIFAGSGVGKSTLMGMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIV
                     ATSDDSALMRKYGAFCAMSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTT
                     KGYPPSVLSLLPQLMERTGKEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVL
                     SRELTDFGIYPPINIQNSASRVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQ
                     KGSDKELDEAISKKEFMQKFLGQNPEESFEFNQTLELLSQIDTPNTPLPPTQNINVGS
                     ASATLPNPNLK"
     gene            complement(5411..5983)
                     /gene="folE"
                     /locus_tag="RJ336_000617"
     CDS             complement(5411..5983)
                     /gene="folE"
                     /locus_tag="RJ336_000617"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDZ5213085.1"
                     /translation="MQKKFEDCVKTILEIIGENPNREGLIKTPNRVFKAYEFLTSGYT
                     QNVKEILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKI
                     PRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGVQKANSTTT
                     TSALRGIFLKNEKTREEFFSLINSAKQVRF"
     gene            6127..7461
                     /locus_tag="RJ336_000618"
     CDS             6127..7461
                     /locus_tag="RJ336_000618"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDZ5213086.1"
                     /translation="MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGF
                     RPGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALQELKKESKELVGEPYFEKFDRKD
                     GEIIAELILSFKPEIKLDGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKR
                     ALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIK
                     VTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKL
                     KEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEI
                     EELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRY
                     GMNPKEHLENYKKQGALPAVKMALIEEKLFNDIFMPKTEKSEKASKKEKEDK"
     gene            7461..8045
                     /gene="clpP"
                     /locus_tag="RJ336_000619"
     CDS             7461..8045
                     /gene="clpP"
                     /locus_tag="RJ336_000619"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDZ5213087.1"
                     /translation="MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIV
                     AQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFL
                     LSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQK
                     VAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK"
     gene            8081..8608
                     /locus_tag="RJ336_000620"
     CDS             8081..8608
                     /locus_tag="RJ336_000620"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDZ5213088.1"
                     /translation="MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGV
                     GLAAIQVDIPLRVLLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDF
                     FEEVKRYNHILLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKF
                     DKEFKKKKKNHKKEK"
     gene            8605..10110
                     /locus_tag="RJ336_000621"
     CDS             8605..10110
                     /locus_tag="RJ336_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDZ5213089.1"
                     /translation="MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASVAIKESVE
                     RIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGEL
                     GLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEF
                     FKEKNYENFRFSHNHPLFTSPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALG
                     MHNILFEGSPGSGKSMCAKRLVYIMPPQSLSEVLMQNAYMSLDSKDCEFTKIRAFRHP
                     HHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHIS
                     RVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLY
                     VAMDEISKDDKTSISSKEMSEKILQAFIFGKKRGQKEFNGKLKDEDLSRFCVLEKDAK
                     DTLDLAISRYNLSLRSLNKILKVSRSIADLEQSLNINKTHILEALSFRARN"
     gene            10112..10810
                     /locus_tag="RJ336_000622"
     CDS             10112..10810
                     /locus_tag="RJ336_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HDZ5213090.1"
                     /translation="MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQ
                     KNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSD
                     YTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALIN
                     ITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREK
                     NIYFLVKKDYESYY"
     gene            10794..12164
                     /locus_tag="RJ336_000623"
     CDS             10794..12164
                     /locus_tag="RJ336_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HDZ5213091.1"
                     /translation="MKAIIDNIKILEQNAINKGLDELILMENAGLNLAKLIKKEAKKI
                     RIQRKIKKVKILFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYA
                     FKFCQKEPDFKKFHIIIDCILGTGSNRCLDEKTSLIIQKVNQSKALKIACDIPTNLGF
                     YPCFKADITLCMGALKEILLEDFAKEFVGRIKIANLGISSKKFYPNSQAFLLEKKDLK
                     TIDRKINANKGNFGHIYIVANVSAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKI
                     ENNASAIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDVVITPHPKE
                     FIKLYKMCFDENLDIETLQKNRFFYARKFSQNYDCVLVLKGANPIIVQKEKLFVVNLG
                     NQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLI
                     KGLKCL"
     gene            12155..12721
                     /gene="purN"
                     /locus_tag="RJ336_000624"
     CDS             12155..12721
                     /gene="purN"
                     /locus_tag="RJ336_000624"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDZ5213092.1"
                     /translation="MLVKLAVLFSGNGSNLENILEKLHKKTIGENTYEVVLCLCNKKD
                     AFGIQRAKKFGLDTVIVDHKAYNTREEFDTILVQKIKESGANLTVLAGFMRILSPVFT
                     KNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDGGMIIAQKAFEKR
                     NLSFEEFEEKIHSLEHEILPLSVIEIFS"
     gene            12793..13512
                     /locus_tag="RJ336_000625"
     CDS             12793..13512
                     /locus_tag="RJ336_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDZ5213093.1"
                     /translation="MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHR
                     DKGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKS
                     IKEIKEQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMII
                     AVIIAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTA
                     MAFALVVQILNILDQRKEKNG"
     gene            13505..13714
                     /locus_tag="RJ336_000626"
     CDS             13505..13714
                     /locus_tag="RJ336_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HDZ5213094.1"
                     /translation="MAKDANGTELNAGDSVSVIKDLKVKGASTTLKRGTTIKNIKLTS
                     KEGEIEARVDKFGVIVLKTEFLKKI"
     gene            13724..14908
                     /locus_tag="RJ336_000627"
     CDS             13724..14908
                     /locus_tag="RJ336_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HDZ5213095.1"
                     /translation="MRILLVLRGNYYAGQEEFIKNNKLQNYTLDLNALRLLSGSVKNI
                     VSEYKILNVKNDEDLSKILLKLLEMRMQKGEFCIINAYNETLKIYKDLAKQYRYKMYV
                     IVFDNSLKQCQEKNLLEAKKNGYIIPYALLEKTQDLLKKNPKKYPILDSSDWKKCLYQ
                     MPNLSKYKKIHHIGDLQGCYSVLKEYIKTIKEDEFYIFLGDYINRGIENGKVIKFLLK
                     ICEKENVCLLEGNHERHLIKWANGELSNSKEFNENTLKDFRKEKLTPRDARKLYPHLK
                     ECLYYKFQNKFIFCSHGGVNFIPSKPEKISFIPSHDFIYGVGGYEDSQKIANQFCNFT
                     SDNLYQIFGHRNKEKLPMKIAKRVFLCEGKIDDGGYLRVVTLDKKGFECIEIKNQIYK
                     KK"
     gene            complement(14921..16279)
                     /locus_tag="RJ336_000628"
     CDS             complement(14921..16279)
                     /locus_tag="RJ336_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDZ5213096.1"
                     /translation="MDPSQVLDLNQTSTASFDAGYSILMVVVALALVFLNGFFVLSEF
                     SIVKVRRSKLEEMVKEKKAGAKKALEVTSRLDTYLSACQLGITLSSLALGWIGEPAIA
                     KMLEIPLINLGFSTVIIHTIAFIIAFSIITLLHVVLGELVPKSIAIAVADKAVLFIAR
                     PLHWFWILFLPCIKIFDFLAAISLKLFGIKPAKESELTHSEEEIKIIASESQKGGVLD
                     EFETEIIRNAVDFSDTVAKEIMTPRKDMICLNKQKSYEENMQIICEHKHTRFPYIDGS
                     KDTILGMIHIRDIIQNELSHKSQNLDTFVKPLILVPENISISKVLVMMNKERSHTALV
                     VDEYGGTAGILTMEDIMEEIIGEIKSEHEEDSYKKLAENIYEFQGRCDIETVEEMLVI
                     NYDEDLEQVTIGGYVFNLLGRLPIVGDRIEDELCYYEVKKMDGNSIERVKVVKKTNKD
                     EE"
     gene            complement(16378..17577)
                     /locus_tag="RJ336_000629"
     CDS             complement(16378..17577)
                     /locus_tag="RJ336_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HDZ5213097.1"
                     /translation="MFSSFFASKKWALWAYLGLFLLLFFLYIQTSLNVAINSWYSDFY
                     NVLQKPKIELLDSNSTQKIEENLENNTTLIQEANQRAEQNFQKANFINKGALYYYQNL
                     LEYFFNSRAMIEKPNYSANDFYALILVFLAIAIPYVLIATINIYFASVYAFKWREAMT
                     FSYLKFWKNKDDNIEGSSQRIQEDTYNFSKIVESLGLSFIKALMTLVAFIPILWSLSD
                     VVSKALFANLSENSSFYFLKNIDGLLVYIALLISLGGLVVSWFVGIKLPGLEYNNQKA
                     EAAFRKELVYAEDNRKEYAKNETMIELFTGLKFNYKRLFLHYGYFNIWLILFEQMIVI
                     VPFLIMAPGLFAGAIGLGIVMQINNAFDQVRSSFSVFITNWTTITQLRSIYKRLKEFE
                     KNISYKS"
     gene            17770..17886
                     /locus_tag="RJ336_000630"
     CDS             17770..17886
                     /locus_tag="RJ336_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213098.1"
                     /translation="MSMKKIILFLLCVGFAFACSEHSHTDFKDLNKTEYNSQ"
     gene            17897..18901
                     /locus_tag="RJ336_000631"
     CDS             17897..18901
                     /locus_tag="RJ336_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HDZ5213099.1"
                     /translation="MKKIFFMFLTAFSFLGASELNIYSARHYDADFEIIKKFEEKTGI
                     KVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIP
                     AHLRDKDKEWFAITKRARIIAYNKNANIDISKMKNYEDLAKAEFKGEIVMRSATAPYS
                     KTLLASIIANDGNKEAKAWAKGVLDNLATNPKGGDRDQARQVFAGEAKFAVMNTYYIG
                     LLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSP
                     EIQKILTDSNYEFPIRNDVELSQTVKDFGTFKEDQIPVSKIAENIKEAVKIYDEVGFR
                     "
     gene            18901..20517
                     /locus_tag="RJ336_000632"
     CDS             18901..20517
                     /locus_tag="RJ336_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDZ5213100.1"
                     /translation="MYKTLKYYKLGAILLALFLVLPIFGIFAELFYILFQNFNTSDLT
                     QFSSIKENLSHFFDYLFLKFIKDTFIISVGVLCLSLILGVSSAYLIANYDFYFCKILE
                     KLLILPLAIPAYILAFVYVGIMDFQGFFHENFGFRIDFFNHYGVIFVLAISLYPYIYL
                     FAKTAFKSEAKEAYEVAKIMKYSEFRIFTRVALLSARPAIFSGALLVLMETLSDYGAS
                     AYLGVDTFSAGIFKLWYDLNDSYSSSVLSGILMLFVFLIMYVDYYYKNKHHYSFNQNL
                     ALFIKKRKLNPIKQILSCIYCFMIAFVGFILPFIWLVYWGLKDHKLFESQFYIISFQT
                     IILALVTALITTFLAYFLMFSSRIVKNHFFNLFILKISSLGYSIPAAALGISIIVLFV
                     FLDKIFHMSLLGNSLLVLVFAYVIRFLASAIYSLEGGYNKIHLNIDEASLNLRTSYFI
                     LFFKIHTPLMKHFLFLAFIIVFIDTIKELPLSRILAPFGFETLSVKAFWFASDERIYD
                     AALPSLFIVFLSLMVVVWMDKITRKDDVRN"
     gene            20501..21409
                     /locus_tag="RJ336_000633"
     CDS             20501..21409
                     /locus_tag="RJ336_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213101.1"
                     /translation="MMLEIKNLSKNFGKIQALENINLHVKEGEFLSILGGSGSGKSTL
                     LRIIAKLEQASSYDLFSCKGEVALMFQNYALFPHLNVEKNILFALYDKKDKNQILNHL
                     LKTFEIEDLRYKKIDEISGGQAQRVAFARAIARGCKLLLLDEPFSNLDQNLKQDLRRE
                     LKKIIENQGITAIMVTHDIEDAYCMSDQIAFLEKGKILAHANPKELYFKPDFKSAQIL
                     PDLNIIEKKLDLEDEFFAWIASKNYIFGYAELKIGNRFEAKILQKEFLGAFYRLKLRY
                     KNIEFFMLLSSNYNLEEKINFDIINF"
     gene            21445..22650
                     /locus_tag="RJ336_000634"
     CDS             21445..22650
                     /locus_tag="RJ336_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase family protein"
                     /protein_id="HDZ5213102.1"
                     /translation="MKNLLIIGAGGVSRVATVKCAMNSDTFSKITLASRTKSKCDEIA
                     AFIKERLGVQIETAQIDADDSNAVVELIKKTGAQILLNVALPYQDLSLMDACIKAGID
                     YVDTANYEHPDLAKFEYKEQWARNDEFKQAGILGLLGSGFDPGVTNVFCAYAQQNLFD
                     EISYIDILDCNAGDHGYAFATNFNPEINLREVSAKGRYWENGKWIETQPMEIKMEWDY
                     PEVGVKDSYLLYHEELESLVKNIKGLKRIRFFMTFGQSYLTHMKCLENVGMLGIKPVM
                     HQGKEIIPIEFLKTLLPDPASLGPRTKGYTNIGCVIRGKKDGKDKQVYIYNVCNHEEC
                     YKETGAQAVSYTTGVPAMIGTKLIAKGIWQGKGVFNMEEFDAKPFMEELNSQGLPWKI
                     IEMTPSLGE"
     gene            complement(22678..23340)
                     /gene="sodB"
                     /locus_tag="RJ336_000635"
     CDS             complement(22678..23340)
                     /gene="sodB"
                     /locus_tag="RJ336_000635"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HDZ5213103.1"
                     /translation="MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKD
                     TEFAGKDLVSIIKTSNGGVFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAA
                     LEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDKVPL
                     LVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYEWALKEGMGSVSFYANELHP
                     VK"
BASE COUNT         8494 a         3208 c         3854 g         7877 t
ORIGIN      
        1 cggcggatat attgaagctt taataaataa aaatttagaa attaaaaaca ttaaaataca
       61 ttttgatatg attaattttt ctcaatttta tactaaattt gtattgcaaa atttaaatta
      121 cgaacaattt tttaacaatc ctgtacaatt ttatgagtta aatttattta gtgatagcca
      181 acaacaaatc aactttgatt atcttgtact agataacaat aaaatcaatt ctttttatag
      241 caaaaaccaa gtaaatttta atgaagaaaa ttcaacaata aacttaaaca tacaaggaga
      301 atccaatgaa attgatattg atcttaaatc tttattgggt cagaatttaa attttgacaa
      361 aacaaaattt aatataacca taaataaatt tcttaactca aatttcaata tctctcattt
      421 tattcaaaaa aatcttgatc taaaaataca aaatttaatt cttgaaaaaa ataaacaaaa
      481 catcagtcta caaggcaatt taaatatcaa caactcttat caagcaaaat tacaagttat
      541 cagtttagat gagcctgatg aaatttttcc ttggacaaag gattatggag gtttaaatca
      601 atatttttta aaagaaaata ataacttttt tctaaattta tcttatgata gcttagccaa
      661 tcctcagcta aaaattaatg gtagtgaatt ttcaaatatg gatttaaatt aatgagccta
      721 gctttgacct ttcgccctga aaattttgat gatattttag gacaatatga gcttatagaa
      781 attttcaaaa aatttactgc tttacaaaaa cttcctcata gcattttttt tggaacagca
      841 ggttctggaa aaacaacttt tgctagagtt gtagccaaag aatttggctt agatttttat
      901 gaatttgatg gaggaaattt taaactcgaa gaactaagaa aaattttaga taattacaaa
      961 aatagtcttt ataaaccttt aatttttatt gatgaaattc accgccttag caaaacccaa
     1021 caagaaatgc ttttaattcc tatggaaaat taccgtttaa ttttaatcgg cgcaagcact
     1081 gaaaatccct attttgtttt aagttctggt ataagaagcc gttccatgct ttttgaattt
     1141 aaatctttag gggtaaagga acttgaaact ttactcttgc gtgtacaaga aaaaatgaaa
     1201 tttaatattg ataaagaagc taaaaatttt ctacttaaaa gtgctgatgc aagagctatg
     1261 ctaaatttgc ttgaatttgt cttggtttta gatgaaaaac atatcagtct tgaaaatctt
     1321 aaaaaacttc gcaacaccat aagtagcgaa ggtgctagct caaaagatac acattatatt
     1381 ttagcaagtg caatgataaa aagtttacgt ggaagtgacg ttgatgcagc tatttattat
     1441 cttgcaagac ttattgatgc aggagaaagt gcggatttta tcgctagacg tttggtgatt
     1501 ttttcaagtg aagatgttgg aaatgccgat ccaaatgctc taaatttagc agtttcgact
     1561 ctagaagctg ttaaaaatat aggttatcct gaagcaagaa ttatcctagc ccaatgcgta
     1621 gtttatttag caagcacaat caaatctaat gcaagctaca aagctatcaa tgaagcttta
     1681 aactatgtaa aaaataatga agctttagaa atacctaatt atcttaacaa caatcatcaa
     1741 gaaaaacaaa actatcttta tccgcatgat tttggtggct gggtagagca aaaatatctt
     1801 agtaaaaatt taaaatttta tcatagcaag ggcttaggag aagaagcaaa attgttagat
     1861 aatttatata aattaaaaaa ccataaagct taattttatt atttaaaatt tacaaaataa
     1921 atgctaaaat caatatttta ttttcaagga aaaagatgat taaaatagga atttatggcg
     1981 ctaaaggacg catgggaaaa cagattgaag aatgtttaaa aagcgaaaca caagcacaaa
     2041 tttcgatact ttatgataag ggtggaaatt tagaagagct ttttgaaaaa agtgatgtga
     2101 ttattgattt ttcttcccca agtggaactc atgagctttt aaattatgca agaactatgc
     2161 ctaaaccttt ggtaataggt acaacaggac ttgatgagaa aattttacat ttgatgcaaa
     2221 gtgctagtga agtgatgccg attttttatg cgaccaatat gtctttaggt gttgcagttt
     2281 taaactatct tgctagcaaa gcaagtcaaa tgttaaaaaa ttttgatata gaaattttag
     2341 aaatgcatca tcgccataaa aaagatgcac caagtggtac ggctatgact ttagcccaaa
     2401 gtgtagcaaa agctagaaat ttagaacttg aaaaagtaag agtaagtgga agagatggca
     2461 tcataggtga aagaagcaaa gatgagattg ctgtgatgag tttaaggggt ggcgatatag
     2521 taggacgcca tacagtaggt ttttatgaag atggtgagtt tttagaactt aatcataccg
     2581 ctacttcaag ggcaactttt gctaaaggtg cgattaaaat cgctatttgg cttagtaagc
     2641 aagaagcaaa aatgtattca attaatgatt ttttaggaat ttaaaatgtg tgcagttgta
     2701 ggagttatca attcaaaaaa tgctagcact tatgcgtatt atgcgctttt tgctatgcaa
     2761 caccgtgggc aagaagcaag tggtatcagt gtaagcaatg gtaaaaatat taagactatt
     2821 aaagccaaag gtgaagtgag tcaaattttt aatcctgata atctaaaaac tttagagggt
     2881 gaaatcgcta tagggcataa tcgctattct acagcaggaa attcaagttt aaatgacgct
     2941 cagcccatag cagctacttc agttttaggt gatattgctt tagcgcataa tggaaattta
     3001 gtcaataaag aagaggtaag atcaagactt attcaagatg gggctatttt tcaaaccaat
     3061 atggacacag aaaatgttgt ccatcttatc gcaagaagta agcaagaaag tctaaaagat
     3121 agatttattg agagtttaaa agaatgtata ggagcttatt gttttgtttt agcaagcaaa
     3181 gataaacttt atgttgtaag agatcctcat ggggtgcgtc ctttgtcttt agggcgttta
     3241 aaagatggag gctatatagt tgctagtgaa acttgtgctt ttgatcttat agaggctgaa
     3301 tttattcgtg atgttaaacc aggagaaatg cttattttta ctcagggaaa tgataaattt
     3361 gaaagcatag aacttttttc tcaaactcct agaatttgcg cttttgaata catttatttt
     3421 gctagacctg atagcatagt agaaggcaaa agcgtgtatg aagtgcgtaa aaaaatgggc
     3481 gaagctttag ctaaaaaatt tgcttataaa gcagactttg tcgtgcctgt gccagatagt
     3541 ggagtaagtg cagctatagg ttttgctcaa tatttacaaa tccctcttga aatggcaata
     3601 gtaagaaatc attatgtagg aagaactttt atagagccaa ctcaagagct tagaaattta
     3661 aaagtaaaat taaagcttaa tcctatgcgt aaagttttag aaggcaaaga aatagtagtc
     3721 attgatgata gcttggtgcg tggcactact tctaaaaaaa taatttcttt acttcgtgct
     3781 gcaggagcga gcaaaatcca tcttgccata gcttgtcctg aaatcaagtt tcctgatact
     3841 tatggcatag atactccaac ttttgaagaa cttatcagtg caaataaaaa tactgaagaa
     3901 gtgcgtgaat atgtagaagc cgatacgcta agttttttaa gtatagaaga attaactcaa
     3961 agcataggcg atgaaagaaa atattcttta atcagttttg atggagatta ttttattaaa
     4021 taattttatt ttaaattagg attaggcaag gttgcacttg cacttcctac atttatattt
     4081 tgagttggtg gcaaaggagt atttggtgta tcaatttgac ttaaaagctc taaagtttga
     4141 ttaaattcaa agctttcttc aggattttgg cctaagaatt tttgcataaa ttctttttta
     4201 gaaatagctt catcaagttc tttatcactt cctttctgat aagcaccgat gcgaagcaat
     4261 acttcatttt cttttaaaag cgagtttaaa cgcttaaatt ttcttgccca aagtttatgc
     4321 tcaggactta taatgtcact cattaccctt gaagcagagt tttgtatatt aataggagga
     4381 taaattccaa agtctgttaa ttcacgactt aaaacaatgt gtccatctaa gatagaacga
     4441 ctttgatcgg cgattggatc actcatatca tcgccatcca ccaaaacggt aaaaaaggcc
     4501 gttatagtgc ctttaccttc ttctttaccc gttctttcca tgagttgagg caaaagactt
     4561 aaaacacttg gtggataacc tttggttgta ggaggttctc caagagctag tcctatttct
     4621 ctttgcgcca tagcaaaacg tgttacacta tccatgataa aaagtacatc tttaccttgt
     4681 tctttaaagt attctgccac actcattgcg caaaaagcac cgtatttacg cattaaagca
     4741 ctatcatcac ttgtagcaac aataatcact gtatcatcga gctttccacc taaatttttt
     4801 tgtataaatt caggaatttc acgccccctt tctcctatga gtgccactac ctttatagga
     4861 gctttggaat ttttaactat cattcccata agagtggatt ttcctactcc gcttcctgca
     4921 aaaataccaa gtttttgccc tacaccacaa gttaaaagtg cgtctatggt tttaacaccc
     4981 acgggaaaaa cttcttctat aagccctctt ttcatcgcat caataggtgc acgcattata
     5041 ggcatatatt tacttacttc tatagctcct ttaccatctt ttggacgcat aaaaggatct
     5101 actaccctgc ctaaaagttc atcgctaacg cctatttgca tacctgcatc acttatgaaa
     5161 gcacgatcgc ctattttaaa accctctata aaagaaaaag ggcttaaata gctaaattgt
     5221 tctttgattt ctacgaccat agctagagtg tttaaatttt cattttcatt ggaaactagc
     5281 ttcactatat ctccaacccc tgttttaagc ccacgaattt ctatactcgt agcagaaatt
     5341 tttgtaatct ctccaaaaat agcacttaaa ttttctttgc caagtttgga gcgtagtttt
     5401 tcaagattca ttaaaatctt acctgtttag cagagtttat gagagaaaaa aattcttctc
     5461 tagttttttc attttttaag aaaattccac gcaaagctga agttgtagtg gtggaattag
     5521 ctttttgtac tccacgcatt tcaacacaca tatgtcttgc ttctatgact acgccaacac
     5581 ctttggcatc gacattttcc attaaagctt gtgcgatttg ttcggtaagt tgttcttgaa
     5641 tttgaagtct tcttgcaaac acctctacaa ggcgtggaat tttgcttaaa cccactactt
     5701 ttttattagg aatataggct acatgagcac gcccaaaaaa aggtaaaaga tgatgttcgc
     5761 aaagactata aaattctata tcacgcacta aaaccatttc attattagag ctttcaaata
     5821 aagcgtcatt taaaatttct ttgacatttt gtgtataacc actagtaaga aattcataag
     5881 ctttaaaaac acgatttggt gttttaatca gtccttcacg atttggattt tctcctataa
     5941 tttcaagtat ggttttaaca caatcttcaa attttttttg caaatttttc tccaaaaaat
     6001 atttttatat tttaataata atgtaatatt gcaattttat cataaattac tttaaaattt
     6061 tatgcaagca ataaggaaaa atttgctatc attgaaagca aattttattt tataaggaaa
     6121 aaaactatgg aagtaaaggc aaagcaacta gattctgtta atgcgactgc tagtgtaaaa
     6181 attccttcag gaatgatcaa aagtgaagta gaaaatttag caaaaaaagc ttctaaaagt
     6241 gtaaaaatgg acggttttag accaggaaaa gttcctgtaa gtgctgtact taaaagatat
     6301 gaaagagaac tcactcaaga tgcagaacaa aatcttttta aatccgctgt aaatagtgct
     6361 ttacaagaac ttaaaaaaga aagtaaagag cttgtaggtg agccatattt tgaaaaattt
     6421 gatcgtaaag atggagaaat tattgctgag ttaatacttt cttttaaacc tgaaattaaa
     6481 cttgatggtt atgaaaaact tatccctgaa tatcaaactc caaaagtaag taaaaaagaa
     6541 attgatgaga aaaaagatga acttttaaag cgttttgcta ctcctgaagc tataaaaaca
     6601 aaaagagctt taaaagaagg tgattttgca aaatttgatt ttgaaggttt tgtggatgat
     6661 aaagcttttg aaggtggtaa agctgaaaat tatgttttag aaattggttc taagcaattt
     6721 attccaggtt ttgaagatgg tatggtggga atgaaaatag gtgaagaaaa agatatcaaa
     6781 gtaactttcc ctaaagaata cggtgcggcg catttagcgg gtaaagatgc agtatttaaa
     6841 gtaaaactac atgagattca agagcttaaa attccagaac ttgatgatga aatgcttaaa
     6901 aaacttttac caggagaaga aaaagctagt gttgaagttt tagatgaaaa attaaaagag
     6961 caaatcaaaa atgaaaaact tttcaaactt gtaaatgatg aattaaaagg caaatttgca
     7021 gatgctttga ttgaaaaata taattttgat ttacctaaag gcatagtaga acaagaaact
     7081 gatatgcaaa tgcgtgcggc ttttaatact tttagcgaaa aagaaattga agagcttaaa
     7141 gcaagtaaag aaaaatacca agaaaaacgt gattctttta aagaagaagc gcaaaaaagt
     7201 gtaaaactta cttttatcat tgatgagctt gcaaaattgc gtaagattga agtaaatgat
     7261 caagaattga ttcaagcgat ttattttgaa gcatatcgct atggtatgaa tccaaaagag
     7321 catttagaaa actataaaaa acaaggagct ttacctgctg tgaaaatggc tttgattgaa
     7381 gaaaaacttt ttaatgatat ttttatgcca aaaacagaaa aatcggaaaa agcgagcaaa
     7441 aaagagaaag aagataaata atgtttattc cttatgttat tgaaaaatct agtcgtggtg
     7501 aaagaagtta tgatatttat tcacgtcttt taaaagatag aattattatg ttaagtggtg
     7561 aaattcatga tgaacttgct gcttctatcg tagcacaact tcttttttta gaagctgaag
     7621 atcctacaaa agatatttat ctttatatta attctccagg tggtgtaatt acaagtggtt
     7681 ttagtattta tgatactatg aactatatca aacctgatgt ttgtacgatt tgtataggac
     7741 aagctgcttc gatgggagca tttttgctta gttgtggcgc agaaggaaaa cgctttgctt
     7801 tgcctaattc acgcattatg attcatcaac ctttaggtgg agctagaggt caagccacag
     7861 atattgaaat tcaagccaaa gaaattttaa gacttaaaac tatacttaat gatattttgg
     7921 caaaaaatac taagcaaaaa gttgcaaaaa tagcaaaaga tacagaaaga gattttttca
     7981 tgtcagcaca agaagctaaa gaatatgggc tgattgataa ggttttggaa aaaagtttta
     8041 aatgatttct ttggagatca tttaaaacaa aggtttttta atggttagaa aaattatcac
     8101 ttatcctaat cctagacttt ttttaaactc tgaaattgta aataaatttg atacagaact
     8161 tcacaccttg cttgatgata tgtatgaaac tatgatagca agtaatggag taggtttagc
     8221 ggctattcaa gtggatattc ctttgcgtgt tttacttgta aatatttttg atgaaaatga
     8281 tgaacaaaaa aaagaagatt tgctagagat tatcaatcct gaaattattc ctttagatga
     8341 agaaatgatc acttgtaccg aagggtgttt gagtgtgcca gatttttttg aagaagtgaa
     8401 acgctataat catatcttgc ttaaatatca agatcgcttt ggagaattta aagaacttga
     8461 agcaaaaggt tttttagctg tggctattca acacgaaaat gatcatttga atggacattt
     8521 atttatagaa aaaatttctt ttgctaagcg tcaaaaattc gataaagaat ttaagaaaaa
     8581 gaagaaaaat cataaaaaag agaaatgaaa aaactaaagt gcataagctt tcatgaaggc
     8641 ttagacatta tagaggtaga atccactttt acaagaggtt tgccaaattt aagcatagta
     8701 ggacttgcaa gtgtagcgat taaggaaagt gtcgaacgca tcaaagccac acttttaagt
     8761 tgtgattttg cttttcctgc taaaaaaatt actatcaatc ttagtccttc aggcatccca
     8821 aaaaagggat cgcattttga tttggctatc gctttattaa tccttttgca aaatgaagaa
     8881 ttagatgact tttttgtagt aggagaatta ggacttgatg gaagtattaa aagcacaaat
     8941 gagctttttt ctttgctttt gtttctctct gctaaaatta aaaaagctaa aattgttgtt
     9001 ccaaaaagta tagcacaaaa agcttccatg ataccaaatt tagaggttta tggacttgaa
     9061 aatttaaatg aagcaataga gttttttaaa gaaaaaaatt atgaaaattt tcgtttttct
     9121 cacaatcatc ctttattcac aagcccttta caaatagaaa atgaaatttt tttacaaaat
     9181 atggatttta aacttgattt taaagatatc aaaggacagg aaaaagccaa aagagcttgt
     9241 atgatagctg ctttaggtat gcataatatc ttatttgaag gaagtccagg aagtggtaaa
     9301 agtatgtgtg ctaaacgcct tgtttatatc atgcctcctc aaagtttaag tgaagtttta
     9361 atgcaaaatg cttatatgtc tttagattca aaagattgtg aatttactaa aattcgtgct
     9421 tttcgtcatc ctcatcatac ttctacaaga gcaagtattt ttggcggagg aacaaaaaat
     9481 gctagaattg gagaagtcgc acttgcaaat ggtggagtat tgttttttga tgaatttcca
     9541 cattttaaca agcaaatcat agagagttta agagagcctt tagaggatca taaaattcat
     9601 atttcaagag taaattctaa aatcacttat gaaacaaaat ttagctttat agctgcccaa
     9661 aatccttgtc cttgcggaaa tttattttct aaaaatcttt cttgtgtttg tagtgaaaat
     9721 gagattaaaa aatacaaaaa tcacatttca gctcctatta tggataggat tgatctttat
     9781 gtagctatgg atgagatcag caaggatgat aaaacgagta taagttctaa agaaatgagt
     9841 gaaaaaattt tacaagcttt tatttttggt aaaaaacgag ggcaaaaaga atttaatggg
     9901 aaattaaaag atgaagattt aagtcgtttt tgtgtactag aaaaagatgc caaagatacg
     9961 ctagatttag caatttcacg ttataatctt tctttgcgat cgcttaataa aattttaaaa
    10021 gtttcaagaa gtatagcgga tttagaacaa agtcttaata ttaacaaaac ccatatttta
    10081 gaagctttaa gctttagagc aaggaattaa aatggaaaat aaaagtatag ctatctttat
    10141 agatgcagaa aatatccctg caaaatacgc taaaagtatt tttgatatcg cttcagatta
    10201 cggagaggtt atcattaaac gcatttatgg ggattggact caaaaaaata tacaaggttg
    10261 gagagagcaa attgctgaat attctttaat cgctatgcaa caatttaatt ttgcagccaa
    10321 caaaaactca agcgatatgt atttaatcac tgaaatcatg tccatatttt atgaaaaaaa
    10381 catagatatt tttgttattg tttcaagcga tagtgattat acttcactca ttcaaaaatt
    10441 aagagaaaat aaaaaacaag ttataggaat ggggcttgaa aagtctataa aatcctatgt
    10501 aaatgctttt agtgaatttt tttatttaga taaagatgag agtaaaaaag aagatatttt
    10561 aagtaaggat tatttaagag ctttaatcaa tatcaccgaa cagcttatcg atgaaaaagg
    10621 gcgcgctgaa tacgcacaaa tccgcactaa tatgaaccgc aaatactcgg attttcatcc
    10681 gcaaaattat ggttttaaga attttcgtgc tttgatccag aaatttttac ccaaaatgaa
    10741 aaaatttgaa gaagaaagag aaaaaaatat atattttttg gtgaaaaaag attatgaaag
    10801 ctattattga taatataaaa attttagaac aaaatgctat aaataaaggc ttagatgagc
    10861 ttattttaat ggaaaatgca ggattaaatt tagccaagct gattaaaaaa gaagctaaaa
    10921 aaattcgcat tcaacgcaag attaaaaaag taaaaatact ttttttatta ggtgggggta
    10981 acaacgcttc agatggcttg gtggctttaa gaaatttaaa acacgctaaa gcttataaaa
    11041 taggctttaa agaaaatacg ctttttaaaa aacaagagca aattttacaa aattatgctt
    11101 ttaaattttg ccaaaaagaa cctgatttta agaaatttca tattattatt gattgtattt
    11161 taggcacagg ttcaaatcgt tgtttagatg aaaaaacaag tttaatcatt caaaaagtta
    11221 atcaaagcaa agctttaaaa atagcttgtg atatacctac aaatttggga ttttatcctt
    11281 gttttaaagc tgatattaca ctttgcatgg gagctttaaa ggaaatttta cttgaagatt
    11341 ttgctaagga atttgtagga aggattaaaa tagccaattt aggcattagc tctaagaaat
    11401 tttaccctaa ttctcaagct tttttgcttg aaaaaaaaga tttaaaaact atagatagaa
    11461 aaatcaacgc caataaagga aattttggcc atatttatat agttgccaat gtaagtgctg
    11521 gaactttagc aggacttgga gccttaaatt ttggagcagg tcttgtttct ttagtagcac
    11581 aaaaaagttt ctcgcctctt ttgatgttaa aagaaaaaat tgaaaataat gcaagtgcta
    11641 ttgctttagg tatggggctt gaaaatttgg attttctaaa agatgaaatt ttgcaaaaca
    11701 ctcctttgat cttggatgca aactgctttt taagtgaagc tttgctttgg tatttaaaca
    11761 gaaaagatgt tgttataacc cctcatccaa aagaatttat aaaactttat aaaatgtgct
    11821 ttgatgagaa tttagatata gaaacattgc aaaaaaatcg ctttttctat gctagaaaat
    11881 tttcacaaaa ttatgattgt gttcttgttt taaaaggagc aaatcctatt attgtgcaaa
    11941 aagaaaaatt atttgttgta aatttaggaa atcaagcctt agctaaaggt gggagtggag
    12001 atgttttaag tggaatgatt gctgcacatt taggttttgg ttttagtgct ttagaagcag
    12061 caaaaaatgc tactttagct catggacttg ttgcaaaaaa atataaattt aataaaaata
    12121 gctttgacgc tttaaaactt atcaaaggat taaaatgctt gtaaaattag ctgtactttt
    12181 tagtggaaat ggaagtaatt tagaaaatat tttagaaaaa cttcataaaa aaaccatagg
    12241 ggaaaatacc tatgaagtag tactttgcct ttgtaataaa aaagatgctt ttggtataca
    12301 aagggcaaaa aaatttggtc ttgatactgt cattgttgat cataaggctt ataatactcg
    12361 tgaagaattt gatacgattt tggtacaaaa aatcaaagaa agtggagcaa atcttactgt
    12421 attagcaggt tttatgagaa ttttaagtcc tgtttttaca aaaaatatta aggcaattaa
    12481 ccttcatcct tctttattac ccctttttaa aggagcacat gcgattaaag aaagttatga
    12541 aagtgatatg aaagtggctg gtgtgagtgt gcattgggtc agtgaagaac ttgatggtgg
    12601 aatgattata gctcaaaaag cttttgaaaa aagaaatttg agttttgaag aatttgaaga
    12661 aaaaattcat agcctagaac atgaaatttt acccttaagt gtgattgaaa ttttttctta
    12721 aagaattaaa ggtatttgct ttaaaactat aaaatatcgc tttaaaaaat tttaaaattt
    12781 tcaaggaaat ttatgtttga atggatattt agtattgatg cttggattac tttagctact
    12841 ttaagtgctc ttgaaattgt actagggata gataatatca tttttttagc tattttagta
    12901 agcaaactac cccctgaaca tcgtgataaa ggacgtatct taggtttagc ttttgcaatg
    12961 attacaagaa ttttacttct tttatctctt ttttgggtga tgaaacttgt aacacctttg
    13021 tttagtgtat tgggcaatga aatttcagga agagatctag ttcttttact aggtgggctt
    13081 ttcttgattg taaagtctat taaagaaatt aaagagcaaa tttctcatca agaagaaagt
    13141 caaagtcatt ttaaagcaag caataaactt tggatagttg tagctgaaat tgctgtgatt
    13201 gatatagtat tttcacttga tagtgttatt accgcagtag gaattgctca agatgtaacc
    13261 atcatgatta tcgctgttat tatcgcagta gctgtgatgc tttttgcttc taaacctata
    13321 gcagattttg ttgaaaaata tccaagcatt aaaattttag ccttagcttt tttggtgtta
    13381 ataggcgtag ttttagttgc tgaaagtttt gatattcata ttgataaggc atatatttat
    13441 accgctatgg cttttgcttt agtggtgcaa attttaaata ttttagatca aagaaaggaa
    13501 aaaaatggct aaagacgcta atggaacaga acttaacgca ggtgatagcg tgagtgtgat
    13561 aaaagatctt aaggttaaag gtgcaagtac aactttaaaa cgtggaacta ctataaaaaa
    13621 tattaagctc acttctaaag aaggtgaaat tgaggctaga gtagataaat ttggcgttat
    13681 tgttttaaaa actgaatttt taaagaaaat ctaggcaaag aatgtgcgaa tcttacttgt
    13741 tttaagaggg aattattacg caggacaaga agaatttatc aaaaataata aacttcaaaa
    13801 ttatacactt gatttaaatg ctttgcgtct tttatcagga agcgttaaaa atatagtcag
    13861 tgaatataaa attttaaatg ttaaaaatga tgaagatttg agtaaaattt tactcaaact
    13921 tctagaaatg cgtatgcaaa aaggtgagtt ttgcatcata aatgcttaca atgaaacatt
    13981 aaaaatttac aaagacttag ctaaacaata tcgctataaa atgtatgtta ttgtttttga
    14041 taactcttta aaacaatgtc aagaaaaaaa tcttttagaa gctaaaaaaa atggatatat
    14101 catcccttat gctcttttgg aaaaaactca agatttactc aaaaaaaatc caaaaaaata
    14161 cccaatttta gactcgagcg actggaaaaa atgtctttac caaatgccaa atttaagcaa
    14221 atataaaaaa attcatcata taggagattt acaaggttgt tatagtgttt taaaagaata
    14281 cattaaaaca atcaaagaag atgaatttta tatatttttg ggagattata tcaacagagg
    14341 tatagaaaat ggcaaagtaa taaaatttct tttaaaaatt tgcgaaaaag aaaatgtatg
    14401 cttattagaa ggaaatcacg aaagacatct tataaaatgg gctaatggag aattgtcaaa
    14461 ttccaaagaa tttaatgaaa atactttaaa ggattttaga aaagaaaaac ttactccaag
    14521 agatgctaga aaactctatc ctcatctaaa agaatgttta tactacaaat tccaaaataa
    14581 attcatattt tgttcacatg gaggagtaaa ttttataccc tccaaacctg aaaaaataag
    14641 ttttatacca agccatgatt ttatttatgg tgtaggtgga tatgaagaca gtcaaaaaat
    14701 agcaaatcaa ttttgtaatt tcacctcgga caatctttat caaatctttg gacacagaaa
    14761 taaagaaaaa cttcctatga aaatagccaa aagagtattt ttatgcgagg gtaaaataga
    14821 tgatggtgga tatttacgcg tagttacact agataaaaaa ggttttgagt gtatagaaat
    14881 taaaaaccaa atttacaaaa agaaataagc ctaaagaggc ttattcttca tctttatttg
    14941 tttttttaac caccttaaca cgctctatag aattcccatc cattttttta acttcatagt
    15001 aacaaagttc atcttcaatg cgatctccta ctataggcaa gcgtcctaaa agattaaata
    15061 catatccacc tatagtaact tgttctaaat cctcatcata gtttattaca agcatttctt
    15121 caacagtttc tatatcgcat cgtccttgaa attcatagat attttcagca agttttttat
    15181 agctgtcttc ttcatgctcg cttttaattt cgccaataat ttcttccatg atatcttcca
    15241 tggttaaaat tccagcagtt ccaccatact catcaactac taatgcagta tgagagcgtt
    15301 ctttattcat cattacaagt acttttgaaa tactgatatt ttcaggaact aaaatcaaag
    15361 gtttaacaaa agtatctaaa ttttgacttt tatggcttaa ttcattttgt attatatctc
    15421 gtatgtgtat catccctaaa atagtatctt tagaaccgtc aatataagga aagcgagtat
    15481 gtttatgttc acaaatgatt tgcatatttt cttcgtaact tttttgttta tttagacaaa
    15541 tcatatcttt tctaggagtc ataatctctt tagcaacagt atctgaaaaa tcaacagcat
    15601 tgcgtatgat ctctgtttca aattcatcta aaactccacc tttttgactc tcacttgcta
    15661 tgattttaat ttcttcttcg ctatgagtta gctcgctttc tttagcaggt tttattccaa
    15721 aaagtttcaa acttatagct gctaaaaaat cgaaaatttt aatacaaggc aaaaagagta
    15781 tccaaaacca atgaagaggt ctagctataa ataaaaccgc tttatctgca actgcaatag
    15841 ctatactttt tggcacaagt tctcctaaaa ccacatgtaa aagagtaata atactaaaag
    15901 caataataaa agctatagta tggataataa cagtgctaaa accaagatta ataagcggaa
    15961 tttctagcat ttttgcaata gcaggctcac ctatccaacc aagagctaga gaacttaaag
    16021 tgattcctaa ttgacaagca ctaagataag tatcaagtct tgaagtaacc tccaaagctt
    16081 tcttggcacc agcttttttt tcttttacca tctcttcaag cttggaacga cgtactttaa
    16141 caatactaaa ttcagacaaa acaaaaaaac catttaaaaa cactagagca agtgcaacaa
    16201 caaccataag tatagaatat cctgcatcaa aagatgctgt agaagtttgg tttaaatcca
    16261 aaacctgact ggggtccaat gaagctcctt aagaaataaa atattattaa accttattat
    16321 acacaattaa aagtaaattt aatatttgaa ttttttcttg tattttataa gaaaaaacta
    16381 agacttataa gaaatatttt tctcaaattc ttttaaacgc ttatatatac ttctaagttg
    16441 agtgatagtt gtccagtttg tgataaaaac actaaaagag cttcgtactt gatcaaaagc
    16501 attgttaatc tgcattacaa taccaagtcc tatagctccg gcaaaaagcc ctggtgccat
    16561 gattaaaaat ggcactataa ctatcatttg ctcaaataaa atgagccaaa tattaaaata
    16621 tccataatgt aaaaaaagtc ttttatagtt aaatttaagc cctgtaaaaa gctctatcat
    16681 agtctcattt ttagcgtatt ctttgcgatt atcctcagca taaacaagct cttttctaaa
    16741 agctgcttca gctttttgat tgttatattc aagtccagga agcttaatac ctacaaacca
    16801 cgacacaacc aagcctccta aagaaatcaa aagtgcaata taaacaagca aaccatcaat
    16861 gttttttaaa aaataaaaag aagaattttc gcttaaattt gcaaataaag ctttactcac
    16921 aacatcactt aaactccata aaatcgggat aaatgctaca agggtcatca aagcttttat
    16981 aaaactaagt cctaaactct ctacgatttt agaaaaatta taagtatctt cttgaattct
    17041 ttgcgaactt ccttctatat tatcatcttt atttttccaa aattttaaat aagaaaaagt
    17101 catagcctca cgccacttaa aagcatagac gctagcaaaa tagatattaa tcgtagcgat
    17161 taaaacataa ggaatagcaa tagccaaaaa aactaaaatc aaagcataaa aatcatttgc
    17221 tgaataattt ggcttttcaa tcatagccct agagttgaaa aaatattcta ataaattttg
    17281 ataataatac aatgcacctt tattgataaa attagctttt tggaaatttt gttcagctct
    17341 ttgattagcc tcttggatta aagtggtatt attttcaaga ttttcttcta ttttttgcgt
    17401 agaattagaa tccaaaagtt ctatttttgg cttttgtaaa acattgtaaa aatcactata
    17461 ccatgaattg attgcaacat ttaagcttgt ttgtatatat aagaaaaata acagtaaaaa
    17521 aagccccaaa taagcccata aagcccattt tttacttgca aaaaatgaag aaaacatgct
    17581 accacctttt aaaagaaaaa ttttaatcaa ctttatttaa tcaagagttt attaaaaatc
    17641 ataaatttat caacacatgt gtcaaaaata aacctcttta ttctttaaag aaatataaaa
    17701 atataaagat tacgtcatat ttacttttta atattaatat ttcttatcaa aatatctaaa
    17761 aaggaattaa tgtctatgaa aaaaataatt ttatttttac tatgcgttgg ctttgctttt
    17821 gcttgctctg aacattctca tactgatttt aaagatctta ataaaaccga gtataattct
    17881 caataaagga taaaatatga aaaaaatctt ctttatgttt ttaacagctt tttcattttt
    17941 aggtgctagt gagcttaata tttactcagc aagacattat gatgctgatt ttgaaatcat
    18001 caaaaaattc gaagaaaaaa caggcattaa ggttaatcat actcaagcca aagcttcaga
    18061 acttattaaa aggctttctc ttgaaggaag taattctcct gctgatattt tcatcacagc
    18121 tgatatttca aatcttacag aagctaaaaa tttaggactt ttatcccctg tttcatcaaa
    18181 atatttagaa gaatttatac ctgctcattt aagggataag gataaggaat ggtttgcgat
    18241 cacaaaaaga gcaagaatta ttgcttataa taaaaacgca aatattgaca ttagcaaaat
    18301 gaaaaattat gaagatttag caaaagctga atttaaagga gaaattgtta tgagaagtgc
    18361 tacagctcct tatagcaaaa ctcttttagc atctattata gctaatgacg gaaataaaga
    18421 ggctaaagca tgggctaaag gtgtgcttga caatcttgcg acaaatccaa agggtggaga
    18481 tagagatcaa gccagacaag tatttgcagg cgaagctaaa tttgcagtta tgaatactta
    18541 ttatataggg cttttaaaga attctaaaaa tccaaaagat gtagaagtgg ggaattcttt
    18601 gggtattatt tttcctaatc aagacaatag aggaacgcat attaacatta gcggtattgc
    18661 tatgacaaaa tcaagtaaaa atcaagatgc ggctaaaaaa tttatggaat ttatgttaag
    18721 tcctgaaatt caaaaaattc ttactgatag taattatgaa tttcctataa gaaatgatgt
    18781 agaattaagc caaacggtaa aagattttgg aactttcaaa gaagatcaaa ttcctgtgag
    18841 taagatagca gaaaatatta aagaagctgt taaaatttac gatgaagtcg gttttagata
    18901 atgtataaaa ccctaaaata ctataaactc ggggcaattt tacttgccct ttttcttgtt
    18961 ttgcctattt ttggtatttt tgctgaactt ttttatattt tatttcaaaa ttttaataca
    19021 agtgatttaa cccaattttc atctattaaa gaaaatttga gtcatttttt tgattattta
    19081 tttttaaaat tcatcaaaga tacttttata attagcgtgg gagtattgtg tttaagcttg
    19141 attttgggtg tgagttctgc ttatttgatc gcaaattatg atttttattt ctgtaaaatt
    19201 ttagaaaaat tactcatttt acccttggcc atacctgctt atattttagc ctttgtttat
    19261 gtgggaatta tggattttca aggatttttt catgaaaatt ttggctttag gatagatttt
    19321 ttcaatcatt atggtgttat ttttgttttg gctatttctt tatatcctta tatttattta
    19381 tttgctaaaa cagcttttaa aagtgaagct aaagaggctt atgaagtagc taaaatcatg
    19441 aaatattccg aatttagaat ttttacacgc gtggcacttt tgagtgcaag acctgccatt
    19501 ttttctggag ctttattggt tttaatggaa actttgagtg attatggtgc aagtgcttat
    19561 ttgggagtag atactttttc ggctggaatt tttaaactct ggtatgattt gaatgattct
    19621 tattcttcta gtgttttatc gggtatttta atgctttttg tatttttgat tatgtatgtg
    19681 gattattatt ataaaaataa acatcattat agttttaatc aaaatttagc tctttttatc
    19741 aaaaaaagaa aattaaatcc tattaaacaa attctatcct gtatttattg ttttatgatt
    19801 gcttttgtag gttttatttt accttttatt tggctagttt attgggggtt aaaagatcat
    19861 aagctttttg aatcacaatt ttatattatc agttttcaaa ctataatctt agctttagtc
    19921 actgctttaa ttaccacttt tttagcttat tttttgatgt ttagttctag gatagttaaa
    19981 aatcattttt ttaatttatt tattttaaaa ataagttctt tgggttattc tatacctgct
    20041 gctgctttag ggattagcat tatagtgctt tttgtatttt tggataaaat ttttcatatg
    20101 agtttattag gaaattcttt acttgttctt gtttttgctt atgtaattcg ttttttagcg
    20161 agtgcaattt attctttaga aggaggttat aataaaattc atctaaatat tgatgaggca
    20221 agtttaaatt taagaacgag ttattttatt ttatttttta aaattcacac acctttaatg
    20281 aaacattttt tatttttggc ttttattatt gtttttattg atacgattaa agaacttcct
    20341 ttaagtagaa ttttagcgcc ttttggcttt gaaactttaa gtgttaaagc tttctggttt
    20401 gcaagtgatg aaagaattta tgatgcagct ttgccttcct tgtttatcgt ttttctttct
    20461 ttaatggttg ttgtttggat ggataaaatc acaaggaaag atgatgttag aaattaaaaa
    20521 tttatctaaa aattttggaa aaatacaagc tttagaaaat atcaatcttc atgtcaaaga
    20581 aggagaattt ttaagcattt taggaggtag tggaagcgga aaaagcacgc ttttaaggat
    20641 tattgctaag cttgaacaag ctagttctta tgatttgttt tcttgcaaag gtgaagtggc
    20701 tttgatgttt caaaattatg ctttatttcc tcatttaaat gttgagaaaa acatactttt
    20761 tgcactttac gataaaaaag ataaaaatca aattttaaat catttgctta aaacttttga
    20821 aattgaagat ttaagatata aaaaaatcga tgaaatttca ggagggcaag cgcaaagagt
    20881 ggcttttgct agagctatag caagaggatg taagcttttg cttttagatg aacctttttc
    20941 taatttggat caaaatttaa aacaggattt aagaagagaa ttgaaaaaaa taatagaaaa
    21001 tcaaggcatt acggctatta tggtaactca tgatattgaa gatgcttatt gtatgtctga
    21061 tcaaatcgct tttttagaaa aaggaaaaat tttagctcat gcaaatccta aagagcttta
    21121 ttttaagcct gattttaaaa gtgcgcaaat tttacctgat ttaaatatca tagaaaaaaa
    21181 acttgattta gaagatgaat tttttgcttg gatagcttca aaaaattata tttttggtta
    21241 tgcagaactt aaaataggaa atcgctttga ggctaaaatt ttacaaaaag aatttttagg
    21301 ggctttttat agacttaagt taagatataa aaatatagaa ttttttatgt tattaagctc
    21361 aaattataac ttagaagaaa aaataaattt tgatattatc aatttttagc taaaattcct
    21421 aaaaatcttt taaggacaaa tttcatgaaa aatcttttaa tcataggcgc aggtggggta
    21481 agtcgtgtgg ctactgtaaa atgcgcaatg aattctgata cttttagcaa aatcacttta
    21541 gctagtagaa caaaaagcaa atgtgatgaa atcgctgctt ttatcaaaga gcgtttaggg
    21601 gttcaaattg aaacggcgca aattgatgct gatgatagca atgcggttgt agaacttatc
    21661 aagaaaacag gagcgcaaat tttactcaat gttgctttgc cttatcaaga tttgagttta
    21721 atggatgctt gtataaaagc agggattgat tatgtagata cggcaaatta cgagcatcct
    21781 gatttagcta aatttgaata caaagagcaa tgggcgagaa atgacgagtt taaacaagca
    21841 ggaattttag gacttttagg aagtggattt gatcctggtg taactaatgt tttttgtgct
    21901 tatgcacagc aaaatttatt tgatgaaatt tcttatatag atattttaga ttgcaatgca
    21961 ggtgatcatg gctatgcttt tgcgaccaat ttcaaccctg aaatcaatct acgtgaggtt
    22021 tctgctaaag ggcgttattg ggaaaatggc aagtggatag aaacgcagcc gatggaaata
    22081 aaaatggagt gggattatcc agaagtaggc gtaaaagata gctatttgct ttatcatgaa
    22141 gaacttgaaa gcttggtaaa aaatatcaaa ggtttaaaaa gaatacgctt ttttatgacc
    22201 tttggacaaa gttatttaac tcatatgaaa tgccttgaaa atgttggaat gctagggatt
    22261 aaacctgtga tgcaccaagg aaaagaaatc attcctatag aatttttaaa aaccttgctt
    22321 cctgatcctg cgagtttggg gccacgcact aaaggttata ccaatatagg ttgtgtgatt
    22381 cgtggtaaaa aagatggaaa agacaagcaa gtttatattt ataatgtttg caatcatgaa
    22441 gaatgttaca aagaaactgg cgcacaagct gtgagctata ctacaggtgt tcctgctatg
    22501 ataggtacga aattaatcgc taaaggaatt tggcaaggaa aaggcgtgtt taatatggaa
    22561 gaatttgacg ctaagccttt tatggaagag ctgaattctc aaggacttcc ttggaagatt
    22621 atcgaaatga ctccgagttt aggagagtaa aaaaggcatc gttttgatgc ctttaaatta
    22681 ttttacaggg tgaagttcat ttgcataaaa gctaactgat cccatgcctt cttttaaagc
    22741 ccattcgtaa gcttttgcaa caaattccca attaatatga gcatagaatt tctctaaata
    22801 agcagggcgt gcattacgat gatctacata ataagcatgt tcccaaacat ctacaacaag
    22861 caaaggaact ttatcttcag taattggtgt agctgcgttt gaagtaccta caaattctag
    22921 tttttgattt ttagtattat aaactaacca aaaccatcct gaaccaaaaa ctcctgtagc
    22981 acctttgatg aattcagctt tgaaattttc taaagatcca aattcttttt ctagtgccgc
    23041 ttgtaaatta gcatctatac tttgacatga accgccacag ccacagcctg tacttggctt
    23101 aatgcaatca aaataaaaat catgattata aacttgagct gcgttattaa atacgccccc
    23161 atttgaagtt ttgataatac ttacaagatc tttacctgca aattcagtat ctttaataag
    23221 attatttaga tttgtaacat aagtattgtg atgttttcca tgatgatagc taaaagtttc
    23281 agcactcaaa aaatcaccaa aagcattggt atcataaggt aattttctta attcaaacat
    23341 aatttctcct ttatttttag tttgatattg aaaatattac cataataata ttaaaaagag
    23401 taaaaatatc ttaaaagctt agtgggtaaa att
//
LOCUS       DAPWGO010000019        23239 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.020, whole genome shotgun sequence.
ACCESSION   DAPWGO010000019 DAPWGO010000000
VERSION     DAPWGO010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23239)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23239)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23239
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.020"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            57..1328
                     /locus_tag="RJ336_000636"
     CDS             57..1328
                     /locus_tag="RJ336_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ5213104.1"
                     /translation="MNGKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSV
                     VISSALPAINRHFEELLTQSGATLASSFTLAHLDILVRLVLTIPAIFVVILSPFAGIL
                     IDKFGKLKFILPAMVVWTISGVSGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDY
                     YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAII
                     YLFEPRKFKFYNHTKIEAKTNYWQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDP
                     KYIGISMSVSALCYGFFSLSYRYIIKFLSIKTIYVLTLFIVSCSFSLLFLVDSFFTVL
                     IALALLGMGGGIMLVNNTAYLFSICPENARARAYGILASCIFLGQFLSPIISQPIVRQ
                     MGLVDAFLIWSIVIFIVCIVFLFLKQKPRIN"
     gene            1411..2523
                     /locus_tag="RJ336_000637"
     CDS             1411..2523
                     /locus_tag="RJ336_000637"
                     /inference="COORDINATES: protein motif:HMM:NF012235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213105.1"
                     /translation="MLKINNLNKKFGNNEILKNINLEIKEGEFLTLVGESGSGKSTLL
                     RIIAGLEEPSQGEILNLNNQDISKQNPRDRNFAMVFQSYALYPHLSVRENLAMPIKAR
                     AKFIHKLPLASFYIKSYKEFKTHLEEKIEQVATKLKITHLLDKKPKQLSGGQCQRVAL
                     GRAIIREPNIFLMDEPLSNLDAKLRIHTRAELSAMHRELNKTFIYVTHDQSEAMTMSD
                     RIAFLVDGELLQVASPDEMYNNPNHLKVAQFIGTPTINTLCVELKSYGFALINKNLSK
                     HKSLAIRAENCFIDPHSQIKAKIYNIENMGNEYLIYTKLLKNDNNFILSLNTQEGKKL
                     QLDSVVGINFDYSKAFIFDEEGKRMDIKLYNLSFAA"
     gene            2520..3377
                     /locus_tag="RJ336_000638"
     CDS             2520..3377
                     /locus_tag="RJ336_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDZ5213106.1"
                     /translation="MKNSLATFCFISPAVLLMLLFLILPIIWVIILSFSDYQLGNGDF
                     HFVGLINYKALLKDPVFFTSVKNTLIYALIVLPLSVLGGLALALLIESKNSAKSFYRA
                     VFFLPVMATLIAMSMVWEYILHPDIGIFNKILALFGVNTINWLSNKDTVLYTLAGIGV
                     WQQLGYNMILFTAGLMSIPTSVYEAAKLDGLNKTQILFKITLPLLLPILFFVLIISSI
                     KAFQVFDTVQVLTNGGPNHSSEVLLFTIYQEAFMFFRTNYASAISVIFLLFILILTLL
                     KIKFLDKKD"
     gene            3381..4193
                     /locus_tag="RJ336_000639"
     CDS             3381..4193
                     /locus_tag="RJ336_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HDZ5213107.1"
                     /translation="MFRILRHLILGILSLFFIFPFVWMVITSFKPENEIFSNAFHFFP
                     QNFTLIENYTKAFKENDLLHFLFNGFFVCFAILLIQIIIAYPCAYALSKYKFKGQKFL
                     LVIIVCSLLIPTQAICVPWYILMYYFGVLDSYLALILPFSISVFGIFLIRQFINCIPN
                     DIIYAARMDGLNEFSILCKIILPLTTPALISFGIFSIVAHWNDYFWPLIAVSSPQYFT
                     PTLGVISFKNNEAGTDYGTLMAASTIVVAPLIIGFLLAQKRFIQGIANTGIK"
     gene            4257..4532
                     /locus_tag="RJ336_000640"
     CDS             4257..4532
                     /locus_tag="RJ336_000640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213108.1"
                     /translation="MKKIFFTLALFGALNLAQAKTELVVSYAYPWFKDLHEKLKEDFE
                     KQNPDIEIRFLAPAQNYEEQSARLLREKMINKLPDVSFNSYSYYLHW"
     gene            4526..5455
                     /locus_tag="RJ336_000641"
     CDS             4526..5455
                     /locus_tag="RJ336_000641"
                     /inference="COORDINATES: protein motif:HMM:NF024808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDZ5213109.1"
                     /translation="MVNKNIPKDLTQNLINKKELGFNDNAFKATTLENKIYAIPFASS
                     LPVVYYNMDLVKQAEWNKELPKTWDELFDLAQKINSLNGKSGVYFGETDTWLILALSL
                     ERGGKLINEKGKVDFNNKAWQETFKLLSDFHTLAKMPAIKRSEAISSFYAGNLGILIQ
                     TSAALTQTEKSINFPLKLSKFPGVQSGGELPVGGSVVMLTNDKNKEAALKYIHFVTGE
                     ANAYVPQYTGYMTSNLLANAKLKDFYNKNPNYTIAPSQIELMGNWPSFPGDNALKATN
                     TLWNYAEKLLMGTSTNYEEIAKQAQEEINALLP"
     gene            5467..6075
                     /locus_tag="RJ336_000642"
     CDS             5467..6075
                     /locus_tag="RJ336_000642"
                     /inference="COORDINATES: protein motif:HMM:NF024811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDZ5213110.1"
                     /translation="MIFFDFDGVLVDSLKLWEQACQFSAKKLGFKGIFPQKPYAKLNP
                     VAHKEIGRILGFNPLEFEKIADEYFLEHIHTLVFFDKTKELLKDLSLDFKLSILSASN
                     ENLVRILLEKEQILKYFTNLHCTSSIPKAQTLKKFKQNHSIMIGDCISDIEAALEADV
                     YSIGVLWGWQDKIMLEKANILVNNHAQLKNAIRSFYEIHPFN"
     gene            6053..6847
                     /locus_tag="RJ336_000643"
     CDS             6053..6847
                     /locus_tag="RJ336_000643"
                     /inference="COORDINATES: protein motif:HMM:NF024258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HDZ5213111.1"
                     /translation="MKFIHLTDIHYGDKKEAIYSREPSAMMRLAIEDINKNHSDADFV
                     FITGDLTHKGSLESYTLLKQDLTKLNMPYYLILGNHDDRANALEIFNNLKQDENGFIQ
                     YEIQCNDNNVFLVLDTIKLKSHGGEYCQKRQIWLKNALERNQNKNIFICLHHAPFKTG
                     LRAMDFIGLDEKHSLELYKLFNSYKNIKHLFFGHYHSTLCGRWKDISFSSLKGINHQV
                     KFDLNSNEILLEFRNPEYAVVLLNNEVLNIHYNDFTFDKNLIFHEK"
     gene            complement(6890..8155)
                     /gene="secY"
                     /locus_tag="RJ336_000644"
     CDS             complement(6890..8155)
                     /gene="secY"
                     /locus_tag="RJ336_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDZ5213112.1"
                     /translation="MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQN
                     NALGLFNVFSGGAAERFSIISLGIMPYITASIIMELLAATFPNIGKMKKERDSMQKYM
                     QIIRYATIVITLVQSIGVAIGLQSLHGRGGAGAIMVEDLNMFIALCAISMLAGTMLLM
                     WLGEQITQRGIGNGISLIIFAGIVSGIPRAISGTVGQINSGEMNFLTAFAIFALILIT
                     IGVIIYVELGERRIPISYSRKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASAILMFPT
                     TILQTSTNPYLQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIVFNAKDIAENLKKQG
                     GFIPGIRPGEGTSSYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFHFGGTSVLI
                     VVQVALDTMRKIEAQIYMSKYQTLSAVGL"
     gene            complement(8155..8547)
                     /locus_tag="RJ336_000645"
     CDS             complement(8155..8547)
                     /locus_tag="RJ336_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDZ5213113.1"
                     /translation="MNLTKAAGSTHKTKRIGRGQGSGMGKTATKGGKGQTARKGYNEK
                     RGFEGGQQPLQRRLPKVGFTSKIQKPYVINVEKITAVKELSEITFDSIKSVHKISKSV
                     NKIKLIGASAKDLVSKIKDENISVTGSK"
     gene            complement(8552..8995)
                     /gene="rpsE"
                     /locus_tag="RJ336_000646"
     CDS             complement(8552..8995)
                     /gene="rpsE"
                     /locus_tag="RJ336_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDZ5213114.1"
                     /translation="MEKYNREEFEEVIVDIGRVTKVVKGGRRFRFTALVIVGNRKGLV
                     GVGYGKAKEVPDAIRKAVDDAFKNIVEVKTKGSTIAHDVEVKYNASRILLKPASEGTG
                     VIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLKG"
     gene            complement(9007..9363)
                     /locus_tag="RJ336_000647"
     CDS             complement(9007..9363)
                     /locus_tag="RJ336_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDZ5213115.1"
                     /translation="MRANVLKRKLTLRIKRKKRIRAKISGCENFPRISVFKSNRTLYI
                     QAIDDVKAVTLAAVDGRKLGVKANKEGAKKIAAEFAKTLKAKKIEQAVFDRNGYVYHG
                     VIAALAESLRENGIRL"
     gene            complement(9373..9909)
                     /gene="rplF"
                     /locus_tag="RJ336_000648"
     CDS             complement(9373..9909)
                     /gene="rplF"
                     /locus_tag="RJ336_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDZ5213116.1"
                     /translation="MSRIGKQPIAIPAGVEVKLEGNLLKFKKGNLAKELDTKANVNVE
                     IKDNNILFSPKGEDRQSRAYWGTYRALAYNIVVGLTQGFSKTLEINGVGYKAALKGKV
                     LELSLGFSHPINYDIPEGIEIVVDKNTIAVKGSDKQVVGQVAAQIREFRPPEPYKGKG
                     VKYSDERIIRKAGKTSKK"
     gene            complement(9988..10383)
                     /gene="rpsH"
                     /locus_tag="RJ336_000649"
     CDS             complement(9988..10383)
                     /gene="rpsH"
                     /locus_tag="RJ336_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDZ5213117.1"
                     /translation="MINDIISDSLTRIRNAGMRKLETTKLLHSKVVEALVGIFQAKGY
                     IESFNVIEEDKKKFINVVLKYDEKGKSVINELKRISKPGRRVYKGKDEIKRFKNGYGT
                     IVVSTSHGVLANDEAYKAGVGGEILCTIW"
     gene            complement(10393..10578)
                     /locus_tag="RJ336_000650"
     CDS             complement(10393..10578)
                     /locus_tag="RJ336_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001085694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HDZ5213118.1"
                     /translation="MAKKSMIAKAARKPKFKVRAYTRCQICGRPHSVYRDFGICRVCL
                     RKMGNEGLIPGLKKASW"
     gene            complement(10580..11125)
                     /gene="rplE"
                     /locus_tag="RJ336_000651"
     CDS             complement(10580..11125)
                     /gene="rplE"
                     /locus_tag="RJ336_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDZ5213119.1"
                     /translation="MMRLKEKYNQSIKPALVKEFDIKNPMLIPVIEKVVISVGAGELA
                     KDQKVLQNVADTISLIAGQKAVITKAKKSVAGFKVREGFPVGVMVTLRKENMYAFLDK
                     LISIALPRVKDFRGLSRDGFDGRGNYNFGLDEQLMFPEVEYDKILRTHGMNISIVTTA
                     QNDKQAQKLLELIGVPFTKGK"
     gene            complement(11129..11362)
                     /locus_tag="RJ336_000652"
     CDS             complement(11129..11362)
                     /locus_tag="RJ336_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDZ5213120.1"
                     /translation="MAVKLKIKKGDSVKVITGDDKGKTGKVLAVYPKTLKVVVEGCKI
                     AKKAIKPSEKNPNGGFINKEMPMDISNVAKVQE"
     gene            complement(11362..11730)
                     /gene="rplN"
                     /locus_tag="RJ336_000653"
     CDS             complement(11362..11730)
                     /gene="rplN"
                     /locus_tag="RJ336_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015106543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDZ5213121.1"
                     /translation="MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVK
                     KALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPV
                     GREVRYGGFMKIVSLAPEVL"
     gene            complement(11730..11981)
                     /gene="rpsQ"
                     /locus_tag="RJ336_000654"
     CDS             complement(11730..11981)
                     /gene="rpsQ"
                     /locus_tag="RJ336_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDZ5213122.1"
                     /translation="MAFKREIQGVVVKIAGEKTASVLVERKVVHPRYRKIVKRFKKYL
                     IHDERNEVKVGDTVVAVECRPLSKRKSFRLKSVLATGVE"
     gene            complement(11991..12176)
                     /gene="rpmC"
                     /locus_tag="RJ336_000655"
     CDS             complement(11991..12176)
                     /gene="rpmC"
                     /locus_tag="RJ336_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDZ5213123.1"
                     /translation="MKYTEIKDKTAAELATMLKEKKVLLFTLKQKLKTMQLTNPKEIS
                     QVKKDIARINTAINALR"
     gene            complement(12163..12588)
                     /gene="rplP"
                     /locus_tag="RJ336_000656"
     CDS             complement(12163..12588)
                     /gene="rplP"
                     /locus_tag="RJ336_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDZ5213124.1"
                     /translation="MLMPKRTKYRKMMKGRNRGYANRGTEFTFGEFALKATEAGRINS
                     RQIEAARIALTRFVKRQGKTWIRVFPDKPLTKKPLETRMGKGKGAVEEWVMNIKPGRI
                     IYEMAGVSEEMAREALTLAMHKLPFKTKFVTRESQNEIY"
     gene            complement(12591..13292)
                     /gene="rpsC"
                     /locus_tag="RJ336_000657"
     CDS             complement(12591..13292)
                     /gene="rpsC"
                     /locus_tag="RJ336_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDZ5213125.1"
                     /translation="MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLK
                     RKLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNIN
                     IKEERKVGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGA
                     EMARTEWYLEGRVPLHTLRAKIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTE
                     ESAPAKKPRRTRRGK"
     gene            complement(13292..13735)
                     /gene="rplV"
                     /locus_tag="RJ336_000658"
     CDS             complement(13292..13735)
                     /gene="rplV"
                     /locus_tag="RJ336_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDZ5213126.1"
                     /translation="MSKALIKFIRLSPTKARLIAREVQGMNAELAMASLKFMPNKGAK
                     YIANAISSAVANGGFEANEVIVKSCRVDAAAVLKRFRPRARGSASRIRKPTSHILVEV
                     AKAEVKAEEKKTVAKKAPAAKKTTTTKAPAKKTTSTKKATAKKES"
     gene            complement(13746..14027)
                     /gene="rpsS"
                     /locus_tag="RJ336_000659"
     CDS             complement(13746..14027)
                     /gene="rpsS"
                     /locus_tag="RJ336_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDZ5213127.1"
                     /translation="MARSLKKGPFVDDHVMKKVIAAKKANDNKPIKTWSRRSTITPDM
                     IGLTFNVHNGKSFIPVYITENHIGYKLGEFAPTRTFKGHKGSVQKKIGK"
     gene            complement(14029..14859)
                     /gene="rplB"
                     /locus_tag="RJ336_000660"
     CDS             complement(14029..14859)
                     /gene="rplB"
                     /locus_tag="RJ336_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDZ5213128.1"
                     /translation="MAIKTYKPYTPSRRYITGLSSEDITAKPSVRSLLVKLPAHAGRN
                     SYGRITSRHKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALIAYKDGEKR
                     YILQPRGLSVGDIVAAAESGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMIRSAG
                     AYAQLMGKEEKYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRHRGIR
                     PQTRGSAMNPVDHPHGGGEGKKNSGRHPVTPWGKPTKGAKTRRKKASDKLIISRRKGK
                     "
     gene            complement(14861..15142)
                     /locus_tag="RJ336_000661"
     CDS             complement(14861..15142)
                     /locus_tag="RJ336_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDZ5213129.1"
                     /translation="MADITDIKTILYTEKSLNLQEQGVVVIQTSPKMTKTGLKAVLKE
                     YFGVTPKSINSLRMDGKVKRFRGRLGQRNDYKKFYVKLPEGVSLENTEA"
     gene            complement(15145..15759)
                     /gene="rplD"
                     /locus_tag="RJ336_000662"
     CDS             complement(15145..15759)
                     /gene="rplD"
                     /locus_tag="RJ336_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDZ5213130.1"
                     /translation="MSKVVVLNDKLEKAGELDLPSKYAEVNPHNLYLYVKSYLASLRA
                     NTAHTKGRSDVSGGGKKPWRQKGRGGARAGSTRTNVWVGGAVAFGPTNERNYFQKVNK
                     KQKRLALERALADKAAKGALFTADSLAIESGKTKDANAVIKKLGVKDALIVKDLLDEK
                     TLLAYRNLANCYVVDVSEVNAYLVSVFNAVIIEKSALESITKEG"
     gene            complement(15756..16331)
                     /locus_tag="RJ336_000663"
     CDS             complement(15756..16331)
                     /locus_tag="RJ336_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDZ5213131.1"
                     /translation="MEYIVEKIGMSRTITNPSIAVTLLRVVNAKVCEVEGGKALVAYP
                     KGKASNKCVAGQQKKYNLSAEYNRFATLEVANTEAGDLDETPLNEAKILKVSFNTKGR
                     GYSGVMKRHNFAGGPASHGSRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKNE
                     VVSYDAENKILVVKGAVPGYNGAMGKIRIAK"
     gene            complement(16341..16652)
                     /gene="rpsJ"
                     /locus_tag="RJ336_000664"
     CDS             complement(16341..16652)
                     /gene="rpsJ"
                     /locus_tag="RJ336_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDZ5213132.1"
                     /translation="MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKI
                     KRYTVLKSPHINKDSREQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEVRAMG
                     K"
     gene            complement(16850..17611)
                     /locus_tag="RJ336_000665"
     CDS             complement(16850..17611)
                     /locus_tag="RJ336_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDZ5213133.1"
                     /translation="MRINKFISHNTRYSRREADELIKQGLVKINNKIALLSDEVKFDD
                     KVFVKGKRVQKRTQFSVIIYHKQKGEIVSKKDDRGRKTIYDTLPRQFSTWLSVGRLDY
                     ASEGLLLLTDSPVIADALMHSDLEREYYLKVKGTVSKQVIEAMQNGLEIKNEKKGAHA
                     KTKITSMSFAPFIDFEIFGSSGGYTKLRVVINEGKNRELRRFFGHFDLEVMDLKRVAF
                     GALDLGMLKAGKHRYLENGEYEKLRDFLKFNEIRY"
     gene            complement(17647..19641)
                     /locus_tag="RJ336_000666"
     CDS             complement(17647..19641)
                     /locus_tag="RJ336_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HDZ5213134.1"
                     /translation="MNMDENKEINKNEQNPNSNSKNNKRYKYKNRRKKLADSLQNEND
                     TPKIDQNSNKEISENSENKTEKKKKKNRNLPSKLTGNEDWQIALAECIEANRVSHENR
                     LHPLKYNNSSEHKIRITPLGGLGEIGGNISVFETNKDAIIVDIGMSFPDGTMHGVDII
                     IPDFDYVRKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEH
                     GLKAERKWFRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKID
                     QTPIDGYPTDLGRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFSRTKGR
                     VIMSTFSSNIHRVYQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDAD
                     EVSKYKDNEVLIVTTGSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASV
                     SAVLDYLLKAGAKVAYQEFSEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKH
                     KETAMKCGIPERNIYLMSDGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVID
                     RQKLADSGIVVIIAQIDKTTKTLINKPRVFSYGLVADKHDHAFSKDMAEVLGQFFINV
                     KDEVLNDPRFLENQIRQVLRKHIFRKIKKYPTIVPTIFVM"
     gene            complement(19610..20410)
                     /gene="rsmA"
                     /locus_tag="RJ336_000667"
     CDS             complement(19610..20410)
                     /gene="rsmA"
                     /locus_tag="RJ336_000667"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDZ5213135.1"
                     /translation="MVKAKKQYGQNFLIDKSVLAKIIQAIPKEMNNIIEIGPGLGDLT
                     QELLKISQVKAYEIDNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLV
                     ANLPYYVASHIILKALEDKNCLGLIVMVQREMAEKFCAKEGNSEFSSLGVLSAMICER
                     KMLFDVDPQCFNPPPKVMSAVMSLIKTKDFDELCEIENFKNFLKDCFKAPRKQLLGNL
                     KTYKAKVLEVLSTLGLKENIRPHEICVDSYLKIYDKLKDEYGRKQRDK"
     gene            20490..21026
                     /locus_tag="RJ336_000668"
     CDS             20490..21026
                     /locus_tag="RJ336_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDZ5213136.1"
                     /translation="MIVCAGGNENFSFAKAIGIGLVESAFHLGQLCFKEKPSKLIFIG
                     TCGLYDKGKILEIYKSSHAFNVEFSKISHAFYTPAKYEICLEKENVSRETIKINSSNY
                     ICQNSKAAKEFSKLGFFAENMEAFSVLSVAKNLNIDAECILCATNFCNENAHEDFIKN
                     HQKAKEKLEEYLKKYHYI"
     gene            21049..22119
                     /gene="rlmN"
                     /locus_tag="RJ336_000669"
     CDS             21049..22119
                     /gene="rlmN"
                     /locus_tag="RJ336_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HDZ5213137.1"
                     /translation="MKELVNILDFLPEELGEKIKPMFRVKQIYQWIYQKYANNFSDMS
                     SLPKYLRLELAQNFHFSPVKCVKNEQSKDGSIKYLFELVDGLRVESVLLPMKEEKIDA
                     EGKRISHARYTICVSSQVGCKSGCSFCLTAKGGLKRNLSAGEIVGQILWIKKQNNIPY
                     ERRVNIVYMGMGEPLDNLKNVSKAVKILAQNDGLAISPRRQTISTSGLAKQIKELGQM
                     NLGVLLAISLHAVNDGLRTELMPINKAYNIAAIMDAVREFPIDQRKRVMFEYLLIDGI
                     NDKLEHAKELVKLLNGIKAKVNLILFNPHEGSLYKRPSLENAIKFQDLLSSKGVTCTI
                     RESKGLDISAACGQLKERAKEQ"
     gene            22216..>23239
                     /locus_tag="RJ336_000670"
     CDS             22216..>23239
                     /locus_tag="RJ336_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S cluster-binding domain-containing
                     protein"
                     /protein_id="HDZ5213138.1"
                     /translation="MLNTTKLLENKLFQERYIKPNIDWYFSYLNGKRGMSRIYKTPYA
                     ILMKKFFLQKYFEKRIKKRIIDIPYLELVLTTKCTMRCQSCNNLMQYFSQNNQYTCTF
                     EGIKKSLEILLSKVDSIARIRIIGGEPLLFKDLPKLIDYLNCQKKILTFSLVTNGTID
                     FKDELINKLKHSKKVRKITISNYKNSPNLKIPLKQEDIIKKLIKNKIPYSLDSNKENS
                     TWFDPEKIYKRGRNKEEIIKNYYYCKMPCVSLMTSEGENLKGKELASNGAIFVCPVSS
                     SLSRLKGLNEFEGDFLNLDDNIEKFFEFYIKDFYKACDYCRDFSKPYKRIPIAIQTNK
                     TLKLEKE"
BASE COUNT         7331 a         4085 c         3386 g         8437 t
ORIGIN      
        1 attttaaata caaaccataa tttttagagt ataataaagc aaaaaaggca aaaattatga
       61 atggcaaaac ttataaattt catccaaatg acacgaaaat ggataaaaaa ataattcaaa
      121 ttactgaaaa gtccggattt aaagcggctg tgttttctat ggccgctatg actatgctag
      181 gaagcgtggt catttcatct gctctgcctg ctatcaacag acattttgaa gaacttttaa
      241 cccaaagtgg cgctactctt gcttcaagtt tcacattagc ccatcttgat atacttgttc
      301 gcttagtttt aaccatccct gctatttttg ttgtcatttt atctccattt gctggtattt
      361 taatagataa atttggcaaa ttaaaattca ttcttccagc tatggtggtt tggactattt
      421 ctggagtaag tggctttttc ttaaatgata tttatgctat actgacttca agagctattt
      481 ttggtatggc aactgctttt ataatgacag gtgcttcggc tttacttgga gattattata
      541 gtcgtggtgg ctttaatcgc agagaaaatg ctttaagtct tcaaggattt ttttgtgcgg
      601 tagggggtgc tgtttttatt tctattgcag gatttgtttc gagttattct tggcgttatc
      661 cttttttagt atatggactt ggaattttaa ttaccttaat ggctatcatt tatctttttg
      721 aacctagaaa atttaaattc tataatcata caaaaataga agcaaaaaca aattattggc
      781 aatttttccc tatctatttt ataggttttt ttatcatggt agtttattat atttcgccaa
      841 ctcaacttcc ttactatata gaagaacatt taggattgga tcctaaatat ataggtattt
      901 cgatgtctgt atctgcacta tgttatggtt ttttctctct aagctataga tatattataa
      961 aattcttaag tattaaaact atctatgttt taactctttt tatcgtatct tgttcttttt
     1021 cgctgctttt tttagtagat agctttttca cagttttaat cgccttagct ttgcttggaa
     1081 tgggcggagg tattatgctt gtaaataata cggcttatct tttttcaatc tgtcctgaaa
     1141 atgctcgcgc tagggcttat ggaattttag caagttgtat atttttagga caatttttaa
     1201 gtcctattat ctctcaaccc atcgttagac aaatgggtct tgtagatgct tttttaatat
     1261 ggtcaatagt aatttttata gtgtgcattg tgtttttatt tttaaagcaa aaacctagga
     1321 taaattaatc ttcaagcatt gcatctgttt ccaaaaagtt tccaatattt gatttaattt
     1381 taaaaatttt ccaaaatatg gagcttggat atgttaaaaa ttaacaattt aaataagaaa
     1441 tttgggaaca atgaaatttt aaaaaacatc aatcttgaaa ttaaagaggg tgaattttta
     1501 accttagttg gagaaagcgg aagtggcaaa tcaactcttc tgagaattat agccggcctt
     1561 gaagagccaa gccaaggtga aattttaaac cttaacaatc aagatataag caaacaaaat
     1621 ccaagagata gaaattttgc tatggttttt caaagctatg ccttatatcc tcacttaagc
     1681 gtgagagaaa atcttgctat gcctattaaa gcaagagcta aatttatcca taaacttcct
     1741 ctggcttctt tttatattaa gtcctataaa gagtttaaaa ctcatttgga agaaaaaatt
     1801 gaacaagtag caacaaaact taaaattaca caccttttag ataaaaaacc caaacaactt
     1861 tctggaggac aatgtcaaag agtcgctcta ggtagggcta ttataagaga acctaatata
     1921 tttttaatgg atgaaccttt atcaaatttg gatgctaaat tacgcattca cacaagagct
     1981 gaattaagtg ctatgcatag agaattaaat aaaaccttta tatatgtcac gcacgatcaa
     2041 agcgaagcta tgactatgag cgacagaata gcttttttgg ttgatggtga gcttttgcaa
     2101 gttgcaagcc ctgatgaaat gtataataac cccaaccatt taaaagttgc tcaatttata
     2161 ggaacaccta caatcaatac cttatgcgtt gaattaaaaa gctatggttt tgctttaatc
     2221 aataaaaact tatctaaaca taaaagtcta gccataagag cagaaaattg ttttatagat
     2281 ccacattcac aaattaaggc caaaatttat aatattgaaa atatgggaaa tgaatattta
     2341 atttatacca aactcttaaa aaatgataat aattttattt taagtttaaa tacacaagaa
     2401 ggtaaaaagc ttcaactaga ctctgttgta ggaattaact ttgattattc aaaagccttt
     2461 atctttgatg aagaaggtaa aagaatggat attaaacttt ataatttgag ttttgcagca
     2521 tgaaaaattc acttgcgact ttttgtttta tttctcctgc tgttttatta atgcttttat
     2581 ttttgatttt acctattata tgggtaatta ttttaagttt tagtgactat cagcttggaa
     2641 acggcgattt tcattttgta ggattgatta attataaagc cttgctaaaa gatcctgttt
     2701 ttttcacttc agtaaaaaat actttaattt acgcccttat tgttctacct ttaagcgttt
     2761 tgggaggttt ggctttagcc ttgcttatag aatctaaaaa tagtgcaaaa tcattttata
     2821 gagctgtctt ttttctacct gttatggcaa ccttgatagc catgagcatg gtttgggaat
     2881 atattttaca tccggatata ggaattttta ataaaattct tgctttattt ggggttaata
     2941 caatcaattg gctttcaaat aaagacacag ttttatatac tcttgctggg attggagtat
     3001 ggcaacaact gggctataat atgatcttat ttacagctgg attaatgagc atacctactt
     3061 cggtatatga agcagcaaaa ctcgatggat taaacaaaac tcaaatttta tttaaaatca
     3121 ccctaccctt gcttttacct attttatttt ttgttttaat tataagttct ataaaagctt
     3181 ttcaagtttt tgataccgtt caggttctaa caaatggagg gccaaatcat tctagcgagg
     3241 ttttattatt taccatttat caagaagctt ttatgttttt tagaacaaat tatgcctcag
     3301 ctatttctgt aatattttta ttatttattt tgattttaac tcttcttaaa attaaatttt
     3361 tggataaaaa ggattgattt atgtttagaa ttttgcgcca tcttattttg ggtatattgt
     3421 cattattttt tatttttcct tttgtatgga tggttataac tagttttaaa cctgaaaatg
     3481 aaattttttc caatgctttt catttttttc cacaaaattt taccctaatt gaaaactaca
     3541 caaaagcttt taaggaaaat gacttgttgc acttcctttt taatggattt tttgtatgtt
     3601 ttgccattct attaatacaa attataatcg cttatccttg tgcttatgct ctatccaaat
     3661 acaaatttaa aggacaaaag tttttgcttg ttattatagt gtgctctttg cttattccaa
     3721 ctcaagctat ttgcgttcct tggtatattt taatgtatta ttttggagtt ttagattcat
     3781 atctagctct tattttgcct tttagcattt cagtctttgg gattttttta attaggcaat
     3841 ttatcaattg tattcccaat gatataattt atgcagcaag aatggatggt ttaaatgaat
     3901 ttagtatact ttgcaaaatt atattaccac taaccacccc tgctttgatt tcttttggaa
     3961 ttttttccat agttgctcat tggaatgatt atttttggcc tttaattgct gtaagttccc
     4021 cacaatattt cactccaacc cttggagtaa tttcttttaa aaacaatgaa gcaggtacgg
     4081 attatggaac cttaatggcc gcctcaacaa tagtagtagc ccctcttata ataggttttt
     4141 tacttgcaca aaaaagattt atacaaggta ttgccaatac aggcataaaa tagcttgtta
     4201 aaacttatta gaattacatt attctaataa gttttaacaa ttttaaagga tttaaaatga
     4261 aaaaaatatt tttcacctta gctctttttg gagctttaaa tttagcccaa gcaaaaacag
     4321 aacttgttgt ttcttacgct tatccttggt ttaaagattt gcacgaaaaa cttaaagaag
     4381 attttgaaaa acaaaatcca gacatagaaa taagattttt agcacccgca caaaactatg
     4441 aagaacaaag tgctagactt ttaagagaaa aaatgatcaa caaactccct gatgtaagct
     4501 ttaacagcta tagctattac ctacattggt aaataaaaat attcctaaag atttaacaca
     4561 aaatcttatc aataaaaaag aattaggctt taatgataat gcttttaaag caaccacttt
     4621 agaaaacaaa atatatgcta ttccttttgc aagctcttta cctgttgtat attataatat
     4681 ggatttagtc aaacaagcag aatggaataa agaacttcct aaaacatggg atgaactttt
     4741 tgatttagct caaaaaatca actcattaaa tggaaaaagc ggggtgtatt ttggagaaac
     4801 agatacttgg cttatattgg ctttaagtct tgaaagaggc ggaaaactca ttaatgaaaa
     4861 aggcaaggta gattttaaca ataaagcatg gcaagaaact tttaaacttt taagtgattt
     4921 tcacacttta gcaaaaatgc cagctataaa acgctctgaa gctataagct cattttatgc
     4981 gggaaattta ggcatactta tacaaacctc agcagctcta actcaaacag aaaaaagcat
     5041 taactttcct ctaaaacttt ctaaatttcc aggtgttcaa tcaggaggag aattacccgt
     5101 aggtggatcc gtagttatgc taactaatga taaaaataaa gaggcagctt taaaatatat
     5161 tcattttgta acaggggaag ccaacgctta tgtacctcaa tatacaggtt atatgactag
     5221 caatttatta gccaatgcaa aattaaaaga tttttataat aaaaatccaa attataccat
     5281 tgctccttct caaatagaac tcatgggaaa ttggccttca tttccaggag ataatgctct
     5341 aaaagctaca aatactttat ggaattatgc tgaaaaactt cttatgggaa caagtacaaa
     5401 ttatgaagag attgcaaaac aagcccaaga agaaatcaat gctttattac cttaaaaggg
     5461 tataagatga tattttttga ttttgatggt gttttggttg atagtttaaa actttgggag
     5521 caagcttgtc aatttagtgc aaagaaattg ggttttaaag gaatatttcc tcaaaaacct
     5581 tatgcaaaat taaatcctgt tgctcacaaa gaaattggga gaattctagg ttttaatcct
     5641 ttagaatttg aaaaaatagc ggatgagtat tttttagaac acatccatac tttagtcttt
     5701 tttgataaaa caaaagaatt attaaaggat ttgagtttag attttaaact ttccatatta
     5761 agcgctagta atgaaaattt agttcgaatt ctccttgaaa aagaacaaat tttgaaatat
     5821 tttaccaatc ttcattgtac aagctcaata ccaaaagcac agacgctcaa aaaatttaaa
     5881 caaaatcact ctatcatgat aggtgattgt attagcgata tagaagctgc actagaagct
     5941 gatgtttatt ctataggagt gctatggggt tggcaagata aaatcatgct cgaaaaagct
     6001 aatatcttag tcaataatca tgctcaatta aaaaatgcta taaggagttt ttatgaaatt
     6061 catccattta actgatatac actatggtga taaaaaagaa gccatttact caagagaacc
     6121 atcagctatg atgcgtttag ctatagaaga tatcaataaa aatcatagcg atgctgattt
     6181 tgtatttata acaggagatt taactcacaa ggggagttta gaatcttaca ctcttttaaa
     6241 acaagattta accaaactta acatgcctta ttatttgatc ttaggcaatc atgatgacag
     6301 agctaatgca ttagagattt ttaataattt aaagcaagat gaaaatggtt ttatacaata
     6361 tgaaatacaa tgtaatgaca ataatgtttt tttagtacta gacactataa aacttaaaag
     6421 tcacggaggt gagtattgtc aaaaacgcca aatttggcta aaaaatgcct tagagagaaa
     6481 ccaaaacaaa aatatattta tttgcttaca tcatgctcct tttaaaactg gccttagagc
     6541 tatggatttt ataggacttg atgaaaaaca ctctttagaa ctttataagc tatttaactc
     6601 atataaaaat ataaaacact tattttttgg gcattatcat agcactcttt gtggaagatg
     6661 gaaagatatt tccttttctt ctcttaaagg catcaaccat caggttaaat ttgatttaaa
     6721 tagcaatgaa atattattag aatttagaaa tccagaatat gctgtcgttt tactcaataa
     6781 tgaagtttta aatattcatt acaatgattt tacttttgat aaaaatttaa tttttcatga
     6841 aaaataaatt atccaagcag gaaatttttc ctgcttggat aattttaaat tacaaaccta
     6901 ccgcacttaa agtttggtat ttactcatat aaatttgagc ttcaattttt ctcatcgtat
     6961 caagtgctac ttgaactaca ataagtacag aagtaccgcc aaaatgaaaa ggtacaccca
     7021 taaatttcac caaaacccaa ggtaaggttg caacaagccc taaataaata gaacctgata
     7081 aagttaaacg agaagctact tcgttaagat aacttgaagt tccttcacct ggacgaattc
     7141 cagggataaa accaccttgt tttttcaaat tttctgctat atctttagca ttaaatacga
     7201 tagaagcata aaaataagca aagaaaatta caaacaagaa agttaaaaca tgaaacaaat
     7261 aaccatttgg atttaaaaag tcattaatgg cttgtagata aggatttgta ctagtttgta
     7321 aaatcgttgt tggaaacatc aaaatcgcac tagcaaaaat cggtggaata accccactaa
     7381 gattgagttt aataggaata taattcataa tgcgtttgtt ttgattttgc attacaactt
     7441 tacgagaata agaaatagga attcttcttt ctccaagttc tacataaata atcacgccta
     7501 tggtgattaa aatcaaagca aaaattgcaa aagcggttaa gaaattcatc tcgcctgaat
     7561 tgatttgccc tacagttcct gaaatcgctc ttggaatacc tgaaacaata cctgcaaaaa
     7621 tgattaaaga aataccattt cctatacctc tttgtgtgat ttgttcgcca agccacatta
     7681 aaagcatagt tcctgcaagc atagaaatag cacaaagtgc gataaacata tttaaatctt
     7741 ccaccattat agcccctgca ccaccacgac cgtgcaagct ttgcaaacct atagcaacgc
     7801 ctatactttg aaccaaagta atcacaatag tcgcataacg gataatttgc atatattttt
     7861 gcatactatc acgctctttt ttcatcttac caatatttgg aaaagttgct gcaagaagct
     7921 ccataataat agaagcagta atataaggca taatacctaa agaaataata gaaaagcgtt
     7981 cagccgctcc accactaaaa acattaaata aacccaaagc attgttttga ttgttgttaa
     8041 aaaattccgc aatcacatca gcattgacgc caggaactgg cacataagcc agaaccctat
     8101 aagcaaacaa aaatgctaag gtgattaaaa tcttattcgt caatgctcta ttcattattt
     8161 tgatccggtg acgctaatat tctcgtcttt gatttttgat actaagtctt ttgcacttgc
     8221 accaattaat ttgattttat tcacagattt tgaaattttg tgaacacttt taatgctatc
     8281 aaatgtaatt tcactaagct cttttacagc tgtgattttt tcaacattga tcacataagg
     8341 tttttgaatt ttagaagtaa aacctacttt tggtagtctt ctttgaagtg gttgttgacc
     8401 cccttcaaaa cctctttttt cattataacc ttttctagca gtttgacctt tacccccttt
     8461 agtagcagtc ttacccatgc cagaaccttg accacggcca attcttttag ttttatgcgt
     8521 tgaacccgct gcttttgtta aattcatctt cttatccttt taacattgtt aaagctttga
     8581 ttgtagcacg aaccacatta gctgaattat ttgaacccaa agacttggtt aagatgtctt
     8641 taatacctgc aagttccacg atagggcgtg tagaaccacc tgcgataact cctgtacctt
     8701 cactagctgg tttaagtaaa attctacttg cgttatattt tacctctaca tcgtgagcga
     8761 tagttgagcc tttagtttta acttcaacga tatttttaaa cgcatcgtca acagctttac
     8821 ggatagcatc tggaacttcc ttagccttac cataaccaac acctactaaa cctttgcggt
     8881 ttccaacgat aactaaagca gtaaatctaa atcttctacc acctttaaca accttagtaa
     8941 ctctgccgat atcgacgatt acttcttcaa attcttctct attatatttt tccatcgatt
     9001 taccccttat agcctaatgc cattttctct taaagattca gccaatgctg cgataacacc
     9061 atgatataca taaccatttc tatcaaaaac agcttgttct atctttttag cttttaaagt
     9121 tttagcaaat tcagcagcga tttttttagc accttcttta tttgctttaa cgccaagttt
     9181 gcgtccatca actgctgcta aagttacagc ttttacatca tcaatcgctt ggatatatag
     9241 agttctgttc gatttaaata cagaaattct tggaaaattt tcacaacctg aaattttcgc
     9301 tctaattctt ttttttcttt tgattcttaa agttagtttt ctttttaata catttgctct
     9361 catattctac ccttacttct tagatgtctt accagctttg cggataatgc gttcatcaga
     9421 atacttaacg ccttttcctt tatatggctc tggcggtcta aattcacgaa tttgagcagc
     9481 aacttgacct acaacttgtt tatcacttcc tttaactgca atagtatttt tatccactac
     9541 aatttcaatt ccttctggaa tatcataatt aataggatga gaaaaaccaa ggcttagttc
     9601 taaaacttta ccttttaaag ctgctttata accaactcca ttgatttcaa gagtttttga
     9661 aaaaccttga gttaaaccta caacgatatt gtaagctaaa gctctgtaag ttccccaata
     9721 agctctactt tgtctgtctt caccttttgg agaaaaaaga atattattat ctttaatctc
     9781 aacatttaca tttgctttag tatcaagttc ttttgctaaa tttccttttt taaatttaag
     9841 caaatttcct tctaatttta cttctactcc tgctggaata gcaatcggtt gtttacctat
     9901 acgagacata tttttccttt ttatttgtct aggatatttc tactttttta aaagaatgga
     9961 tacccaatgc cataaaaagc agatttttta ccaaatggta cataaaattt cgccgccaac
    10021 acctgcttta taagcttcat cattagctaa aacaccatga cttgtgctaa ctacgatagt
    10081 accataacca tttttaaaac gcttgatttc atctttacct ttataaacac gacgaccagg
    10141 cttagaaatt cttttaagct cattgataac actcttacct ttttcatcgt attttaaaac
    10201 tacattgata aatttctttt tatcttcttc aataacatta aaactctcaa tatagccctt
    10261 agcttgaaaa attccaacta aagcttctac aactttagaa tgtaaaagct tggttgtttc
    10321 aagctttctc attcctgcat ttctgatacg agtgagtgaa tctgaaataa tatcatttat
    10381 catattttat ccttaccaac ttgctttctt aagacctgga atcaaacctt cgttacccat
    10441 ttttcttaag caaactctgc aaattccaaa atctctataa accgaatgcg gacgcccaca
    10501 aatttggcat cttgtataag ctctaacctt aaatttaggc ttgcgtgccg cttttgcaat
    10561 cattgatttt ttagccatct tactttcctt ttgtaaatgg cacaccgata agttctaata
    10621 acttttgtgc ctgtttatca ttttgtgctg ttgtaactat agaaatgttc ataccatgag
    10681 ttcttaaaat tttatcatac tccacttctg ggaacatcaa ctgctcatca agaccgaagt
    10741 tatagtttcc gcgtccatca aaaccatctc tacttaaacc tctaaagtct ttcacccttg
    10801 gcaaagcaat agaaattaat ttatcaagaa aagcatacat attttctttt cttaaagtta
    10861 ccattacacc cacaggaaaa ccttcgcgaa ctttaaatcc tgcgactgat tttttagctt
    10921 tagtaatcac agccttttgt cctgcaatta aagaaatagt atctgcaaca ttttgcaata
    10981 ctttttgatc tttagccaac tcaccagcac ctacgctgat aactactttt tcgatcacag
    11041 ggataagcat aggattttta atatcaaatt ctttaaccaa tgcaggttta atgctttgat
    11101 tgtatttttc ttttaatctc atcatcgctt actcctgaac ttttgccaca ttggaaatat
    11161 ccattggcat ttctttattg ataaaaccac catttgggtt tttctcgctc ggcttaatag
    11221 cttttttagc gattttgcat ccttcaacta ccactttaag tgtttttgga tataccgcta
    11281 aaactttacc tgttttacct ttatcatcac ctgtgataac cttaacgcta tcaccttttt
    11341 tgatttttaa tttaaccgcc attataatac ctccggtgct agtgaaacga ttttcataaa
    11401 gccaccatat ctaacttctc tgcccactgg cccaaagata cgagttccga taggctctct
    11461 tttgttatca agaataaccg cagcattttc atcaaaacga atcaaagaac cattatctct
    11521 atgaatttct tttttagttc taacgataac cgcttttacc acttgacctt ttttaacttt
    11581 tccatttggt aaagcttttt taacagatgc aacgattaca tcacctacgg tagcgtatct
    11641 tcttttacta ccccctaaaa ccttgataca cattaattct tttgcaccgc tattgtcagc
    11701 aactgcaagt cttgtaaaac tttgaatcat tactcaactc ctgtagctaa tacagatttt
    11761 aagcgaaatg attttctttt tgaaagtggt ctgcattcta ctgcaacaac agtatcacca
    11821 actttaactt catttctctc atcatgaatt agatattttt taaagcgttt aacaattttt
    11881 ctatatcttg gatgaaccac ttttctttca accaaaacac ttgcggtttt ttcaccagcg
    11941 attttaacaa caacgccttg aatttctctt ttaaatgcca ttttctatcc ttatcttaaa
    12001 gcgttaattg ctgtatttat tctagcaatg tcttttttta cttggctaat ctcttttgga
    12061 ttagtaagtt gcattgtttt tagcttttgt tttaaagtga ataaaagcac ctttttttct
    12121 tttagcattg ttgcaagctc agctgctgtt ttatctttaa tctcagtata tttcattttg
    12181 gctctctctt gtaacaaact tagttttaaa tggaagttta tgcatagcta aagtcaatgc
    12241 ttctcttgcc atttcttcgc ttactcctgc catttcataa atgatacggc ctggcttgat
    12301 attcattacc cattcttcaa cagcaccttt acctttaccc atacgagttt ctaaaggttt
    12361 ttttgtcaaa ggcttatctg ggaaaactct aatccaagtt tttccttgtc ttttaacaaa
    12421 acgagttaaa gcgatacgtg ctgcttcgat ttggcgtgag ttaatgcgtc ctgcttcagt
    12481 tgcttttaat gcaaattcac caaaagtaaa ttctgttcca cgattagcat aacctctgtt
    12541 acgccctttc atcattttgc gatatttagt tctttttggc attaacatga ttatttaccc
    12601 cttcttgtgc gtcttggctt tttagctgga gcactttctt cagttttttc aggttgcata
    12661 cctttgtgta atacttcacc tttaaagatc catactttaa cccctatgtt tccataagta
    12721 gttctagctt ctgcaaaacc ataatcgatt tttgctctta aagtatgaag tggaacgcgt
    12781 ccttcaagat accattctgt tcttgccatt tcagcaccac ctaaacgacc agaaactgaa
    12841 actttaatcc ctttagcacc tgctttttgc gcaccttgaa ttactttttt catcgctctt
    12901 ctaaaagcaa ttcttttttc aagttgagtt gcaacacttt cagcagcaag ttgagctgaa
    12961 gctcctactt ttctttcttc tttgatattg atatttacat ctttaccgat taaatcttgc
    13021 aattcttttc ttaaattatc aacatcacta ccttttttac cgatgatgat acctggtctt
    13081 gcagcaacta cagtaacgcg aagtttttta gcagttcttt ctactaaaat ttgactgatt
    13141 cctgcgtaat aaagttttct ttttaagaaa gctctgattt tgtaatcttc accgatattt
    13201 tctactaaat ttgctttagt cggaaaccat cttgattccc agtttctatt gattcctagt
    13261 cttagaccaa ttggattaac tttttgtccc attagctttc ctttttcgct gttgcttttt
    13321 tagtgcttgt tgttttttta gctggagctt ttgttgtagt agttttttta gctgctggag
    13381 cttttttagc tactgttttt ttctcttcag ctttcacttc tgcttttgcc acttctacta
    13441 aaatatgtga agttggtttt ctaatacgac ttgcacttcc tctagctctt ggtctaaatc
    13501 tttttaatac cgcagctgca tccacacgac aactttttac aatcacttca tttgcttcaa
    13561 agccgccatt tgctaccgca cttgaaattg catttgcgat gtattttgca cctttatttg
    13621 gcataaattt taaactagcc atagctaatt ctgcattcat cccctgaact tctctagcaa
    13681 tcaatcttgc tttagttgga gataatctta tgaatttaat taatgcttta ctcatatctt
    13741 atcccttact taccaatttt cttttgcaca gagcctttat gccctttgaa tgtgcgtgtt
    13801 ggagcaaatt caccaagttt ataaccgatg tgattttcag taatataaac cggaatgaag
    13861 cttttaccat tatgaacatt aaatgtaagt cctatcatat caggagtaat tgtgcttctt
    13921 cttgaccaag ttttaattgg tttattatca ttagcctttt tagcagcgat gacttttttc
    13981 attacatgat catcaacaaa aggacctttt tttagtgatc tagccatctt actttccttt
    14041 tcttcttgaa attattagct tatcgctagc ttttttacga cgagttttcg cacctttagt
    14101 tggtttaccc catggagtta ctggatgacg gcctgaattt ttcttacctt cacccccacc
    14161 gtgcgggtga tctactgggt tcatagcaga accacgagtt tgtggacgga tacctctatg
    14221 gcgatttcta cctgctttac cgatagttac gttagcccat tcttcatttc caacttcgcc
    14281 gatacttgcc atacattcag ctaaaacttg tctcatttcg ccacttgcaa gtcttaaaat
    14341 aacatatttt tcttctttac ccataagttg tgcataagca cccgcagaac ggatcatttg
    14401 accgccttta cctggtttta actcaacatt atgaacaata gtacccacag gaatattttt
    14461 aagtttcatt gcattacctg gtttaatatc aagtccgctt tcagcagctg caacgatatc
    14521 tccaacgctt aatccacgtg gttgaagaat atatcttttt tccccatctt tataagcaat
    14581 caaagcaatt ctacaatttc tatatggatc atactcgatc gcttctactt tgccttctat
    14641 accgaattta cgacgtttaa aatcaataat tctgtaaagt tttttagcac ccgcttcttt
    14701 atgacgactt gtaattcttc catagctgtt acgacccgcg tgtgctggaa gtttaacaag
    14761 tagtgagcgt acacttggtt tagctgtaat atcttcagaa cttaaacctg tgatatatct
    14821 tctacttgga gtatatggtt tataagtttt aattgccatc ttaagcctcc gtattttcta
    14881 agctaacacc ttcaggtagc ttaacataga attttttgta atcgtttctt tgacctaaac
    14941 gacctctaaa acgcttaact tttccatcca ttcttaatga attgatgctt tttggagtta
    15001 caccaaaata ctcttttaaa accgctttta agcctgtttt agtcatcttt ggtgaagttt
    15061 gaataactac gacaccttgc tcttgcaaat tcaaactttt ttctgtgtaa agtatagtct
    15121 ttatatcagt aatatctgcc ataattatcc ctcttttgta atagattcta acgctgattt
    15181 ttctatgata acagcattaa atacagatac taaataagca tttacttcgc ttacatcaac
    15241 tacatagcaa tttgctaaat ttctgtaagc taaaagtgtt ttttcatcta gtaaatcttt
    15301 aacgattaaa gcatctttga cgccaagttt tttaatcaca gcgtttgcat cttttgtttt
    15361 accactttca atagccaaag aatcagcagt aaataacgca cctttagctg ctttatctgc
    15421 taaagctctt tcaagcgcca atcttttttg ttttttattt actttttgga agtagtttct
    15481 ttcatttgtt ggaccaaaag caaccgcacc gcctacccaa acgttagttc ttgttgaacc
    15541 cgctctagca ccgccacgac ctttttgtct ccaaggtttt ttaccaccac cacttacatc
    15601 acttctacct ttagtatgag ctgtatttgc tcttaaactt gcaaggtaag attttacata
    15661 caagtaaaga ttgtgtggat ttacttccgc atattttgaa ggtaaatcaa gttcacctgc
    15721 tttttctaat ttatcattta aaacaactac tttactcatt ttgcaatcct tattttaccc
    15781 atagcaccat tataacctgg tactgcacct ttaactacta aaattttgtt ttcagcatca
    15841 taagatacaa cttcgttttt aacggttact ttagtatttc cataatgtcc tgccattttc
    15901 atacctggtt gaacacgacc tggccattct ctattaccaa tagatccgtg gcgtctgtga
    15961 aatctagaac cgtgacttgc tggaccccct gcgaagttat gtcttttcat aacaccgcta
    16021 taacctctac ctttagtgtt aaagcttact tttaaaattt ttgcttcatt taatggagtt
    16081 tcatctaaat ctcctgcttc agtgtttgct acttctaaag tcgcaaatct attgtattct
    16141 gcagaaagat tatacttttt ttgttgtcct gcgacacatt tattacttgc tttacctttt
    16201 ggatatgcta ctaaagcctt tccgccttca acttcacata cttttgcatt tacaactctt
    16261 agtaaagtta cagcgatact tggattagta attgttctgc tcattccgat tttttctaca
    16321 atatattcca tatcttatcc ttacttaccc atagctctta cttcaacgct tacttctggc
    16381 gctaaatcaa gcttagttaa agaatcaact gtatctggag tcgctgctac tatatctagc
    16441 atacgcgcgt gaattcttat ttcaaactgc tcacgagaat ctttgttaat gtgtggagat
    16501 tttaaaactg tatagcgttt gattttagta ggcattggta tcggacctct gatatccgca
    16561 cctgttcttt taacagcttc tacgattgct gcaactgttc tgtctagtac tcgatggtca
    16621 taagctttta gcttaagcct aattctttcc ataatatttc ctttaaaaag aactcgttag
    16681 ttaaaaacta accaatttat aaaaattgaa atgagagtat ataaaatctt gttttcaaag
    16741 tcaaggaatt tgatgaaatt tttctattat tttcctttta aaaaggataa aaatagaatt
    16801 tttagaattt aaaaattatc attatttttt aaatttttgt atataatggt caatatctta
    16861 tttcattaaa ttttaaaaaa tctcttaatt tttcatattc tccattttcc aaatagcgat
    16921 gttttcctgc cttcaacata ccaagatcta aagccccaaa agcaacacgc ttaagatcca
    16981 tgacttcaag atcaaaatgt ccaaaaaagc gtctaagctc tctattttta ccttcattta
    17041 taaccactct aagcttagta taacctccac ttgatccaaa aatttcaaag tctataaaag
    17101 gagcaaaact catagaggta attttagttt ttgcatgtgc gccttttttt tcatttttaa
    17161 tctcaagtcc attttgcatg gcttcgatga cttgtttgct caccgtgcct ttaactttaa
    17221 ggtagtattc tctttctaaa tcgctatgca ttaaagcatc ggcaatcaca ggagaatctg
    17281 taagcaaaag caagccctcg cttgcataat ccaatctacc tacgctaagc caagtactaa
    17341 attgtcttgg caaggtatcg tatatagttt ttcttccacg atcgtctttt ttactgacaa
    17401 tttcaccttt ttgtttatgg tagattatca cgctaaattg cgttcttttt tgcactcttt
    17461 tacctttaac aaaaacttta tcatcaaatt taacttcatc gcttaaaagg gcaattttgt
    17521 tgtttatttt tactaagcct tgtttgataa gttcatcagc ttcacggcgt gaataacgag
    17581 tgttatggga tataaattta ttaattctca tttgatcttc cttaaaaagg gcgtttttgc
    17641 ccttttttac attacaaaaa tagttggaac tatggttggg tattttttaa tctttctaaa
    17701 gatatgcttt cttaagactt ggcggatttg gttttctaaa aatcttggat cattgagtac
    17761 ttcatcttta acattgatga aaaattgccc taaaacttca gccatatctt tactaaaagc
    17821 atgatcgtgt ttgtcagcta ctaacccata gctaaacact cttggcttgt tgatcagtgt
    17881 ttttgtagtt ttgtcaattt gtgcgataat aactactata ccactatctg caagtttttg
    17941 acgatctata actacatcat cggcaatttg tttgttgatt tgattatcca caaaaacttt
    18001 acctgttttt acggttttta tgcgtttgac atatttttgg caaagttcta cttgatcgcc
    18061 atcactcata agatagatat ttctttcggg gataccgcat ttcatcgctg tttctttgtg
    18121 tttggtgata tgattgtatt ctccatgaac cggtaagaaa aatttaggtt tagtaagggt
    18181 tagcataagt ttttgctctt ctatgctagc gtgtccgctt acatgaattt cactaaattc
    18241 ttgatacgct actttagctc ctgcttttaa aagatagtca agcaccgcag aaacacttgc
    18301 ttcatttcct ggtatggctt tagctgaaat gattacttga tctgtaggct taatctttat
    18361 aaatttatgc tcatcagttg ccattctata aagcgcactc atggtttcgc cttgacttcc
    18421 tgtagttaca ataagcactt cattgtcttt atatttgctt acctcatcag catcgatgaa
    18481 aatttttcta tcaagtttaa tatagcctaa ttccatagta gtataaagat ttctttccat
    18541 agaacgacca ataacacaaa cttttctgcc gtattttaaa ccataagtga tagcctgata
    18601 aacacggtgg atattagaac taaaagtact catgatcacc ctacccttag tacgcgaaaa
    18661 aatttgatca aaagttggcc ctacagagct ttcacttttt gtataacctt ctttataaga
    18721 atttgtacta tcacttaaaa gacataaaac tccttcttct ccataatgtg ctaaacgtcc
    18781 taaatctgtt ggatagccat caattggagt ttgatcgatt ttaaaatcac ctgtgtggat
    18841 aatcgttcct gcttttgttt tgatcgcaag tgctgaagca tcaatgatag aatgcgtgat
    18901 atgaatccat tctatatcga attcgcctat ctcataaaca cggcgttttt ctacagggcg
    18961 aaaccatttg cgttctgctt ttaagccatg ttcttcaaat ttgtttgaaa tcattcctaa
    19021 agctaaaggt gtagcgtaga taggaaattg gaattcttta aagaaataag gcaccgcacc
    19081 gatatgatct tcgtgtgcat gagtgatcac tataccacga attttatctt taatttttct
    19141 tacatagtca aaatcaggga tgataatatc taccccatgc atagttccat caggaaaact
    19201 catacctata tctactataa ttgcatcttt attggtttca aaaacactga tatttccacc
    19261 aatttctcct aagcccccta aaggagtgat gcggatttta tgttcgctag aattgttata
    19321 ttttaaaggg tgtaagcggt tttcatgtga aacacggtta gcttctatac attctgcaag
    19381 agcgatttgc caatcttcat tacctgtgag ttttgaagga agattgcgat tttttttctt
    19441 ttttttctca gttttatttt ctgagttttc agaaatttcc ttgttggaat tttgatcgat
    19501 ttttggagta tcgttttcat tttgtaaaga atcggctaat ttttttctgc gatttttata
    19561 tttatagcgt ttattgtttt ttgaatttga gttcggattt tgttcgtttt tatttatctc
    19621 tttgttttcg tccatattca tcctttaatt tgtcataaat tttaaggtat gaatcaacgc
    19681 aaatttcatg tggtctgatg ttttctttta agccaagagt gcttaaaact tctaaaactt
    19741 ttgctttata tgtttttaaa tttcctaaga gttgttttct aggagcttta aaacagtctt
    19801 ttagaaaatt tttgaaattt tctatttcgc aaagttcatc aaaatcctta gttttaatca
    19861 aactcatcac cgctgacata acttttggcg gtggattaaa acattgtgga tcaacatcaa
    19921 aaagcatttt tctttcgcaa atcattgcac ttaaaacacc taaggaagaa aactcactat
    19981 ttccttcttt agcgcagaat ttttcagcca tttctctttg caccattaca ataagcccta
    20041 gacaattttt atcttctaaa gcttttaata taatgtgact tgcaacataa taaggcaaat
    20101 ttgcaaccaa aaaatatggt ttttcatcaa gactaggatt aaaagcttcg cttgcgtctt
    20161 gatggatcaa gttaaatttt ccacattcaa gttctttttg aaatttcttt tttaaaatag
    20221 gtatgagatc attatcgatt tcataagctt ttacttgaga aatttttaaa agttcttgcg
    20281 ttaaatcacc taagccaggc ccaatctcaa taatattgtt catctctttg ggtatggctt
    20341 ggatgatttt tgctaatacg cttttatcga ttaaaaaatt ttgtccgtat tgtttttttg
    20401 ctttaaccat aagaaataat tttatctaaa aattcttaat taagtctttt taggtagaat
    20461 tatttttgta aaatttcata aggatcaaaa tgattgtttg tgcgggtgga aatgaaaatt
    20521 tttcttttgc aaaagctata ggtataggtt tggttgaatc agcttttcat ttgggtcaac
    20581 tttgcttcaa agaaaaacca tcaaaactta tatttatagg aacttgtggg ctttacgata
    20641 agggtaaaat tttagaaatt tacaaaagtt cacacgcttt taatgtagaa ttttctaaaa
    20701 tttcacatgc tttttatact cctgcaaaat atgaaatttg tttagaaaaa gaaaatgttt
    20761 ctcgtgaaac aatcaagatc aattcttcaa attatatttg tcaaaattca aaagcagcaa
    20821 aagaattttc gaaattaggt ttttttgcag aaaatatgga agccttttct gttttaagtg
    20881 tagctaaaaa tttaaatatt gatgcagagt gtattttgtg tgcaacaaat ttttgcaatg
    20941 aaaacgctca cgaagatttt ataaaaaatc atcaaaaggc aaaagaaaaa ttagaagaat
    21001 acttaaaaaa atatcattat atttaaaaat tcaaaaagga aaataatttt gaaagagctt
    21061 gttaatattt tagatttttt acctgaagaa ttaggagaaa aaatcaaacc gatgtttcgc
    21121 gtgaaacaaa tttatcaatg gatttatcaa aaatatgcca ataatttttc cgatatgtca
    21181 agtttaccaa aatatctacg tttagaactt gcgcaaaatt ttcatttttc ccctgtaaaa
    21241 tgtgttaaaa atgagcaaag taaagatgga agtataaaat atctttttga actcgttgat
    21301 ggtttaaggg tagaaagtgt gcttttgcct atgaaagaag aaaaaataga cgcagaaggc
    21361 aaaagaattt ctcatgcaag atacactatc tgtgtttctt ctcaagtggg ttgtaaaagt
    21421 ggatgtagtt tttgtcttac tgccaagggt ggtttgaaaa gaaatttaag tgcaggggag
    21481 atagtcggac aaattttatg gatcaaaaaa caaaataata tcccttatga acgccgtgta
    21541 aatatagtat atatgggtat gggcgagcct ttggataatc ttaaaaatgt ttctaaagcg
    21601 gtaaaaattt tagcacaaaa tgatggactt gccataagtc ctcgccgtca aaccatcagc
    21661 actagcggtt tggcaaaaca aatcaaagaa ttaggtcaaa tgaatttagg tgttttactt
    21721 gctatatcat tgcatgcggt taatgatggg cttcgaaccg aacttatgcc tatcaataaa
    21781 gcttataata tcgctgcgat tatggatgcg gtgcgtgaat ttcctataga tcaaagaaaa
    21841 agagtgatgt ttgaatatct tttgatcgat ggtatcaatg ataagcttga acacgctaaa
    21901 gaattagtca agcttttaaa tggtattaaa gccaaagtga atttaatact ctttaatcca
    21961 catgaaggaa gtttatataa acgccctagt ttagaaaatg cgattaaatt tcaagattta
    22021 ctcagtagta aaggtgtaac ttgcactata agagaaagta aagggcttga tatctcagct
    22081 gcttgtggac agcttaaaga aagggcaaaa gaacaatgac aatgctagat atttttgaaa
    22141 tcgtttttat aacagctgtt gtaattatag gtttttttgg tataatttat tttttaaata
    22201 aagaaaggtg aaataatgtt aaatacaaca aaattactcg aaaataaatt atttcaagaa
    22261 agatatatta aaccaaatat agattggtat ttttcttacc taaacggaaa acgaggaatg
    22321 tcaagaattt ataaaacacc ctatgcaatt ttaatgaaaa aatttttttt acaaaaatac
    22381 ttcgaaaagc gtattaaaaa aagaataata gatatacctt atcttgagct cgttttaact
    22441 acaaaatgca ccatgcgttg tcaatcttgc aacaatttaa tgcaatactt ctctcaaaat
    22501 aatcaatata cttgcacatt tgaagggata aaaaaatcac ttgaaatttt actttccaaa
    22561 gtggatagta ttgcaagaat tagaattata ggtggagaac cattattatt taaagattta
    22621 cctaaactta ttgactactt aaattgtcaa aaaaaaattt tgacatttag tttagtaaca
    22681 aatggtacta ttgattttaa agatgaatta attaataaac tcaaacattc taaaaaagtt
    22741 aggaaaatca ctatttcaaa ttataaaaat tcaccaaatt taaaaatccc attaaaacaa
    22801 gaagatataa tcaaaaaact tataaaaaat aaaatcccat actctctaga ctccaataaa
    22861 gaaaattcta catggtttga tccagaaaaa atttacaaaa gagggcgcaa caaagaagag
    22921 attataaaaa attactatta ttgcaaaatg ccctgtgtaa gtttaatgac aagcgaagga
    22981 gaaaatctaa aaggtaaaga attggcttca aatggagcta ttttcgtatg tccagtttca
    23041 agttctttaa gtcgtcttaa aggtttaaat gaatttgaag gcgattttct aaatttagat
    23101 gataatatag aaaaattttt tgaattttat attaaagatt tctataaagc ttgtgattat
    23161 tgtagagatt ttagcaaacc ttataaaaga attcctattg ccattcaaac caataagact
    23221 ttaaaacttg aaaaagaag
//
LOCUS       DAPWGO010000020        23162 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.021, whole genome shotgun sequence.
ACCESSION   DAPWGO010000020 DAPWGO010000000
VERSION     DAPWGO010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23162
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.021"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            65..2050
                     /locus_tag="RJ336_000671"
     CDS             65..2050
                     /locus_tag="RJ336_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HDZ5213139.1"
                     /translation="MLKQSIETYKKGDNLGAKKLSEDAYFQHFENMEGPIGRNIGRKA
                     ITMERKFVNLRRMYKDEAPLTQINALIDSLYYDLDEVAPILQNGYRLKAEASDTNYDK
                     AKAEKSSLEANAKREADAEALIAQMMGVDKKDLAQSSLTTQASTPANNDTSKLTDDNA
                     SADLQAAAAMDARLQFILDNISTKFSQAANAFKEKNYQASKDFLNDALFSDYRNTKVE
                     ILVNKFTKAGNDQKIQQAIRTLIRQINDAKIDEKGLRDGLDNIEEQIFDVFLQIPNSE
                     LSSLQISGFNDETKGKDYAKVSNDIKLALDEILKNYDGFSASIVDDLQGIYLDIFEAS
                     GMENKIGAVDSGLKLKIESLFSKGVALIKASADKKELEATFNDLEQLIASSVDKIQDS
                     TPYSLFIWALGIILREGLEALIIVVAIVSYLVQSGNKNRLNIAYSALFTGVILSFVTA
                     FGVSWLFKENAGQSRELIEGITMLIAVLLLFYVGFWLLSNAQNKKWTSFIKQGAIDAI
                     SNNSAKTLWITVFLAVYREGAETVLFYQALLFDAKTSTDFSAVFGGLGLGILILIVLY
                     FLLKAGAIRIPVKQFFYITSYIIFYMVFVFTGKGIAELIEGKVIIPSLIPMNFEPILW
                     LGIYPYYETLIPQFIVLIMLIIGILITKQISKKGVKS"
     gene            2047..2586
                     /locus_tag="RJ336_000672"
     CDS             2047..2586
                     /locus_tag="RJ336_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HDZ5213140.1"
                     /translation="MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQP
                     IEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKR
                     GTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVG
                     KWFEPFKVDYKFKYTGTPK"
     gene            2668..4071
                     /locus_tag="RJ336_000673"
     CDS             2668..4071
                     /locus_tag="RJ336_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2318 domain-containing protein"
                     /protein_id="HDZ5213141.1"
                     /translation="MSIYFVHFLISVLPLSILMAFITPDKKYIFKSFLVVFLGFLFGY
                     FAFFIAAQFLKTENLIFNFDFVFIGLLLVSFIFYFWKKIEILNFILLGILSFCTALHY
                     YFLSQDFPIFTSSLIDSEGISSLGFIALALLVCILIFFFLKWQKNFNQKTSFMLFLLL
                     ILIESDKALANILLTLMRNSIIETHTFLVSFVGKSNYFGVFGIYVYLIFITFLAFLSL
                     KIRKKNISKKQILDINYRKNEAKTSLINRYFSSVFISCVISFCIILYFFMVSSKPLTI
                     DEPKEILPNKNGKFIFDIALLRDNKLHRFAYISAEGKVIRFFLINKREDRDSPVAVFD
                     ACMICGDMGYIKKDGQLICISCNVRIFLPSVGKSGGCNPIPLKYEYDGKKITIDVKDV
                     IAGSNYFSQIKEIEVQDPVSKTKIINTQAPFSYSYKGITYYFSNQNNYEEFKKDPTKY
                     VEENEAQFLIQRRNDVG"
     gene            4058..5350
                     /locus_tag="RJ336_000674"
     CDS             4058..5350
                     /locus_tag="RJ336_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ5213142.1"
                     /translation="MMLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGD
                     EVTKQLKSYGSNILVLPKGSSLSIEIGNELYEPLKNKNYLEEKNLYMIKDIYWRNNIT
                     ALAPFLEGKITIENSQQKALIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQGEWAKD
                     DSNEIMLGEDFAKNNKLKLGDTIELTGENNQSKEAKIVGILLHANPKMSNKIIAPLNL
                     AQDLLNKQGLYSSAEVRAFTIPESALSEKVRRMGEEKLDQLEYDKWYCSAYVGSIASQ
                     ISDGLPGADAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIAISSLMSSEIHRRK
                     KEIGLLKVLGANTFQIYLIFASENLIVALFAALFGFIFGTALSQIISLSIFGYFIDIA
                     FIALPLSFIFAGLIALLGCLLPIKNITQLSAAGVLYGR"
     gene            5340..6458
                     /locus_tag="RJ336_000675"
     CDS             5340..6458
                     /locus_tag="RJ336_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDZ5213143.1"
                     /translation="MVDKFFLNELFKSISFSYQRLFIIVLSVFIGALTCSAFLNIYFD
                     IDTKLSKELKAYGANVMISPKQDENFISNAEYEKIKENLKARALTPFLYDFLNLGSTS
                     GVVLGTDFRALKITKPFLEVKEGSFSLNDFDENSAFLGVNLAKQLGLKTGNELQIYNP
                     NNGKSIKLTIKGILSSNDEFDSIVLAPLSVVQNLSDRAGINYANAVVYGNFDEVKAKT
                     QAISNEFIDAKPISSVSLSEGLVLGKIKALMFLIILVVLIIVTTSVNTTLSSIIFSRK
                     KEIALRLALGAKKSEIFKLFASECFIVSFFASLIGAFCGIFLANVFGYLIFNSSIDFR
                     FIAVFIALIISLIFAFLAAFFPIKRALKINVCENLKGE"
     gene            6455..7108
                     /locus_tag="RJ336_000676"
     CDS             6455..7108
                     /locus_tag="RJ336_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213144.1"
                     /translation="MMKKELIKINNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSG
                     KSTLLNILSLMDTPSSGEYILDNENLEQMDEEQKITLRREKIGLVFQQFHLIPYLNAL
                     ENVMLSQYYHSSVDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPEL
                     LLADEPTGNLDEANEQIVLQTLQKLKNEGKTIVLITHNPDLAKFADRTLILQHGVLK"
     gene            7105..7593
                     /locus_tag="RJ336_000677"
     CDS             7105..7593
                     /locus_tag="RJ336_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDZ5213145.1"
                     /translation="MKKSLLILSILFLLNACSFENSKDTGKVGEKSAEISAKDTLGKA
                     VKLADDNTSLKVLVFFQNGCPSCLKELPSLDEFIQNHPNKISVYAINSIDNANVVKVL
                     AEQFDFKNVKVLKDDLKITNDRYAVFATPTTIIIKDGMIKDRILGEKPWEFFESKLIS
                     LL"
     gene            7554..8057
                     /gene="traF"
                     /locus_tag="RJ336_000678"
     CDS             7554..8057
                     /gene="traF"
                     /locus_tag="RJ336_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HDZ5213146.1"
                     /translation="MGIFRIQAYFFALIIALFFVACDSGENFKALNSDKTYNFAYNGF
                     EKSLKLNDKTQNFALVFFTKDCGVCKEQIPILQNLAKNYDFNIFVVLGDANDANDAKA
                     WADEKGLSNLAMFYEKRAAKYLSSAIGEIYGVPVLSFFKEGKMDEKFIGLTPYSILEK
                     EIKKVKS"
     gene            complement(8067..8504)
                     /locus_tag="RJ336_000679"
     CDS             complement(8067..8504)
                     /locus_tag="RJ336_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HDZ5213147.1"
                     /translation="MKKTILTILFLLTLTQAKEIQVYESPTCGCCDLWADYMKAKGYE
                     VSVHKTNDFLKIKEKMGIKDEYQSCHTGVIEGYAIEGHVPESAIVWLLENKPKDVIGI
                     SAPGMPQGSPGMEQGYSEKYPVILMKKDGSYELYGYFIGDKKL"
     gene            complement(8784..9227)
                     /locus_tag="RJ336_000680"
     CDS             complement(8784..9227)
                     /locus_tag="RJ336_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213148.1"
                     /translation="MKKLGLALAALVALNVSAFAGVITIHDSNLVKVSGGDDTYAKIA
                     LDNAKEGMKNQFNTDNLEIYAIESIKKDDPEHYNVIQRGSFKVMKQEIAKGKTVYYNE
                     FLVVDRKTNWAAEWDIECDHLDRPIKLSNNVNCRSGISTRRYNFK"
     gene            complement(9402..9486)
                     /locus_tag="RJ336_000681"
     tRNA            complement(9402..9486)
                     /locus_tag="RJ336_000681"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9450..9452),aa:Leu,seq:tag)
     gene            complement(9492..9568)
                     /locus_tag="RJ336_000682"
     tRNA            complement(9492..9568)
                     /locus_tag="RJ336_000682"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9532..9534),aa:Arg,seq:tct)
     gene            complement(9583..9659)
                     /locus_tag="RJ336_000683"
     tRNA            complement(9583..9659)
                     /locus_tag="RJ336_000683"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9623..9625),aa:Arg,seq:tcg)
     gene            complement(9664..9740)
                     /locus_tag="RJ336_000684"
     tRNA            complement(9664..9740)
                     /locus_tag="RJ336_000684"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9704..9706),aa:His,seq:gtg)
     gene            complement(9765..9842)
                     /locus_tag="RJ336_000685"
     tRNA            complement(9765..9842)
                     /locus_tag="RJ336_000685"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9805..9807),aa:Pro,seq:tgg)
     gene            complement(9885..10733)
                     /locus_tag="RJ336_000686"
     CDS             complement(9885..10733)
                     /locus_tag="RJ336_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HDZ5213149.1"
                     /translation="MRFIFLICCACLVFANEILLLSKFDKQDFNSKDFNAYLMSEKLD
                     GVRGIWDGKYLKTRQNYKIKTPDFFTKNFPPFAIDGELWIARNKFDEISALIRSGDSN
                     LTLWKEVTYNIFDVPNACEEFQISTCTLKNRLAVLEEYLQKYPSAYIKIIPQIPVENQ
                     NNLNQFYESIIKNQGEGIVIRKNLSPYEKGRSKNAMKLKPYDDAECELVGFRKGKGKF
                     ENQVGALLCKMPNGQIIKIGSGLKDEDRKNPPKIGSIVTYKFNGLTKNSLPRFPVFLR
                     IRDENP"
     gene            complement(10733..11395)
                     /gene="cgpA"
                     /locus_tag="RJ336_000687"
     CDS             complement(10733..11395)
                     /gene="cgpA"
                     /locus_tag="RJ336_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoprotein CgpA"
                     /protein_id="HDZ5213150.1"
                     /translation="MKTRILAIFFIFTSLLYADENPFKTDQNITLVAPPEFQKEEVKF
                     NSSARILKSITFNYINLDGSEDKIDLDVNKSIDWHDTYTISRFKSPDPSKVLDVSVTI
                     PEKNSSKQESNSTANVEIPLQVAKIYDFISYAVYKNKIKLNTSDEMITDFSVGNPSKI
                     VIDFRSNLISPTKNIRLSNSIFKRIDFGSHKGYYRLVIYLDGTYNYNIQKDATGYMIN
                     LL"
     gene            complement(11385..11588)
                     /locus_tag="RJ336_000688"
     CDS             complement(11385..11588)
                     /locus_tag="RJ336_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213151.1"
                     /translation="MIFWAFLVVIGAIYFGNMFFGQYSLDTLLSLENTKEELNKKIIL
                     LKEQNAKAQKDYFELKGLYPNEN"
     gene            complement(11654..12898)
                     /gene="eno"
                     /locus_tag="RJ336_000689"
     CDS             complement(11654..12898)
                     /gene="eno"
                     /locus_tag="RJ336_000689"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDZ5213152.1"
                     /translation="MLVIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTG
                     SKEALELRDNDERFGGKGVLKAVANVNETIADEILGLDAFNQTQLDDTLRELDGTNNY
                     SNLGANATLGVSMATARAAAAALGMPLYRYLGGANASILPVPMCNIINGGAHANNNVD
                     FQEFMIMPFGFTSFKEALRSVCEIYAILKKELANSGHSTALGDEGGFAPNLANNTEPI
                     DLLMTCIKKAGYENRVKIALDVASTEFFKDGKYHMEGKAFSSEDLIERYVELCAKYPI
                     CSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPN
                     QIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNTGQIKTGALARGER
                     TAKYNRLLEIELESDEYLGEKL"
     gene            complement(12898..13929)
                     /gene="recA"
                     /locus_tag="RJ336_000690"
     CDS             complement(12898..13929)
                     /gene="recA"
                     /locus_tag="RJ336_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDZ5213153.1"
                     /translation="MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSV
                     GLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKY
                     AKNLGVNTDDLYVSQPDFGEQALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGD
                     QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFY
                     ASVRLDVRKVATLKQNEEPIGNRVKVKVVKNKVAPPFRQAEFDVMFGEGLSREGELID
                     YGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENPEIADEITKAIQNSMGIEGMIS
                     GSEDDEGEE"
     gene            14035..14895
                     /locus_tag="RJ336_000691"
     CDS             14035..14895
                     /locus_tag="RJ336_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis family protein"
                     /protein_id="HDZ5213154.1"
                     /translation="MKKITIAHSPDADDIFMYMAIKFGWIGNDFAYENTALDIQTLNE
                     FALKNEFDATAISFGLYPLIASEYALLRTAVSFGEGYGPKLIKKKDTHLKRNFKVALS
                     GANTTNALIFRMKYPEARIIYKNFLDIENAVLSGEVDAGVLIHESILEFDQSLCVEAE
                     LWDIWLEFAKENLPLPLGGMALRRSLPLSDAIKIERDLTYAVKIADANRKILAPMLME
                     RKLIRVNEEKLDTYLNLYANKNSISMNQTQLLAVDTLFKLGYDYKFYDKIIHVNDYLI
                     PSEYEEARNS"
     gene            14907..15176
                     /gene="fliQ"
                     /locus_tag="RJ336_000692"
     CDS             14907..15176
                     /gene="fliQ"
                     /locus_tag="RJ336_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HDZ5213155.1"
                     /translation="MDESTLVALGVQTFKITLLLSLPMLLAGLIAGLVISIFQATTQI
                     NEMTLSFVPKIILVVVILIFLMPWMTTTMIDFTENILNQIPTFIK"
     gene            15173..15949
                     /locus_tag="RJ336_000693"
     CDS             15173..15949
                     /locus_tag="RJ336_000693"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDZ5213156.1"
                     /translation="MIIDFKKYSSVRIGNEFEVLVLDQICDFDGFLIGGANNLLISPK
                     PKNIGILGDGFDFIQILDQNKDFIHLRIGCKTKSSKMYRFAKENNLKGFEYLSKIPGT
                     LGGLLKMNAGLKGECISQNLIKIATFQGEILRENINFDYRFCPLNMPFFWAEFKLNFG
                     FDILKDEALKNARSNQPSGASFGSIFKNPKNDFAGRLIEAVGLKGFSKGDAMLSDKHA
                     NFLINKKNASFEDAFFLIELARKKVFEEFGINLENEVIII"
     gene            complement(15973..16743)
                     /locus_tag="RJ336_000694"
     CDS             complement(15973..16743)
                     /locus_tag="RJ336_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213157.1"
                     /translation="MKMRYCFILFLSLVLSSNLLANNFSQKKVIKIEKSADSFEVIDL
                     NQNVANPNLNQQKALFDSSTLIEKKSQITKDEDIDFAIVLTSRKNFGYFLDGFRVSDK
                     EFSTLFAKNLIQSLKLNWVNSAANGIYQSPKTLSYFSPKDAKLINVSPFLTQEKDKAK
                     MYAKFTDYVVVVNLQDFYVNITNYFITTSKEGVANVNFKIISTSNGKILAAKNAELNL
                     TLKDQDAKQNYQDIVNQMPKMLASVIDNEIKKLKLTIN"
     gene            complement(16783..17547)
                     /locus_tag="RJ336_000695"
     CDS             complement(16783..17547)
                     /locus_tag="RJ336_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDZ5213158.1"
                     /translation="MLNLDKFLEIAINASNQASKAILEERKNFKTWEKEDKSPLTSAD
                     LASNKILNDILGSTDIKILSEEKLLSKEECEELKTFWLIDPLDGTSGFLKGSDEFCVM
                     ISLVHDNRPVLSLIQNPSKGDIFYAHAKTKVYKNDKPLQIDQQEYEKNKYKALLSVNH
                     LSKEDEDFAKEHQLEAINIGSGLKFCAILEARAGVYKRFEKLNIWDIVAGDFLINQNG
                     GFMGDFSKKYILYNPLNYKSSPFICVSSRNFLQDFL"
     gene            complement(17628..18896)
                     /locus_tag="RJ336_000696"
     CDS             complement(17628..18896)
                     /locus_tag="RJ336_000696"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDZ5213159.1"
                     /translation="MSNSVTITDNRNGKSYEFPIYDGTTGPSVVDMSSFYKQTGMFSY
                     DEGLTSTATCKSKITYIDGENGILMHRGYPIEWLAENKLYLDVVHLLLYKELPDATRL
                     EAFRYEMKKRSFIHEGMHRLFDSFPDNAHPMAVLQGAVSSLSAFYPDHLNMNVKEEYM
                     EMAARIVAKIPTIVATAYRYKHGFPMAYPNLDRGFTENFLYMLRTYPYDHVELKPIEV
                     KALDTVFMLHADHEQNASTSTVRAVGSTHAHPYACIAAGIGALWGHAHGGANEGVIRM
                     LEQIGSVDRVDEFIKRAKDKNDPFRLMGFGHRVYKNFDPRAKVLKKLRDQLIDELGID
                     TNLIKVATRIEEIALSDDYFVQRGLYPNVDFHSGLILKALGIPNEMFATLFVIGRTPG
                     WIAQWIEQKEQESLKIVRPRQLYLGETSKI"
     gene            complement(19011..20186)
                     /locus_tag="RJ336_000697"
     CDS             complement(19011..20186)
                     /locus_tag="RJ336_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDZ5213160.1"
                     /translation="MHQSVIDPQGLIDLKILIVIALCLLFSPHIAKILRLPLSATEII
                     LGAVIAYFGFIGKSENFALLANVGFYYLMFIAGMEVNLRAFFNMDKEVAKKSFFYIFL
                     LYALSSLIVWIFGLSLVFVIIIPVMSVGLLSLLFKDFGKECYWLNIAMIVATLAEVIS
                     IVLLTIAGAFLREGTGIIDVAQSILYLNIFLGLCLLGFKMLGVLFWWYPQLKVVLMPW
                     EDKNEKDIRFCMAIFILIIVAMVITKLEIVLGSFIAGSFIATFFDHKKDLEHKLSTFG
                     HGFLIPIFFIHIGSTFDLKMILDYKIVLQAFLLMFVMVGLRILCASVFLKRIGFKNMI
                     LFGLSHSMPLTLLIATATLGYSGKVIDEKLYSALILTALFEAIIVMSMIKFLSNSKK"
     gene            complement(20167..21003)
                     /locus_tag="RJ336_000698"
     CDS             complement(20167..21003)
                     /locus_tag="RJ336_000698"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase"
                     /protein_id="HDZ5213161.1"
                     /translation="MQIMLCAISNIASGNCSEDCKYCTQSAHVKTDIQKYRRKELSQI
                     VLEAKMAKKNEALGFCLVTAGLGLDDEKLEYVCEAAKAVQKEVPNLLLIACNGMASVE
                     QLKELKKAGIFSYNHNLETSKEFFPQICTTHTWESRFQTNLNAKEAGLMLCCGGIYGM
                     GESEEDRLSFRKSLQELQPFSTPINFFIANENLKLQVPRLSADEALKIVRDTKEALPQ
                     SVVMVAGGREVVLQERQYEIFQAGAGAIVIGDYLTTKGEEPSQDIIKLKEMGFTFASE
                     CH"
     gene            complement(21005..23107)
                     /gene="topA"
                     /locus_tag="RJ336_000699"
     CDS             complement(21005..23107)
                     /gene="topA"
                     /locus_tag="RJ336_000699"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDZ5213162.1"
                     /translation="MKKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGI
                     KIEDDEFIPEYRITSDHSALVKELKSKAKDAKEVYLATDEDREGEAIAYHIAKAIGKD
                     ENTLPRIVFHEITKNAIENALKNPRKLDMHSVNAQQTRRLLDRIVGYKLSPLLGQKIQ
                     RGLSAGRVQSAALKIIVDREKEIRAFVPLEYFSIDMIFQKDLDAELVEFDKAKIEKLT
                     ITNKDRAKLILEACKNEAYAISDIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTM
                     MIAQKLYEGVNTHEGVMGVITYMRTDSLNLAKEAIENARKFIQTNFGKDYLPSKANVY
                     TTKAKGAQEAHEAIRPTNLSFTPEIAAKFLDKDELKLYTLIYNRFLACQMNPAISQTQ
                     NVFVKNDRALFKISGRKILFDGYYKVYGDMDKDKILPNLKIGENLKIQNLEMNSHFTE
                     PPSRYSEAGLVKKLESLGIGRPSTYAPTISILTSRDYVKIDKKQLIPSDVAFNVTEVL
                     EKNFSDIVDSKFTSNLENTLDEIAEDKADWQETLKEFYYPFMRKIEEGKTKIASQKTV
                     TKLGESCPDCGGELAIRKGRFGEFVACLNFPKCKYSRNLKSESKNESENTAAKAKANG
                     TGITCPSCQKGEIVERFSKRGKFYGCSAYPKCNFISKYKPSEEKCEECGETLVIKELK
                     KGTFLECLKCKIKKEMKD"
BASE COUNT         7708 a         3929 c         3501 g         8024 t
ORIGIN      
        1 tttatcaagc tcagcttttg ctagagtaga tgattatatt aatgaagcaa atcttatcaa
       61 agacatgcta aaacaaagca tagaaactta caaaaagggt gataatctag gtgctaaaaa
      121 gcttagcgaa gatgcgtatt ttcaacattt tgaaaatatg gaaggcccta taggaagaaa
      181 cataggaaga aaagccatca ccatggagcg taaatttgta aatttgcgtc gtatgtataa
      241 agatgaagct cctttgacac aaattaatgc tttaattgat agtctttatt atgatcttga
      301 tgaagtagcc cctattttac aaaatggata tcgtttaaaa gcagaagcaa gcgatacaaa
      361 ctatgataag gctaaagctg aaaaatcaag cctagaagcc aatgccaaac gcgaagctga
      421 tgcagaagct ttaatcgcac aaatgatggg cgtggataaa aaagatttag cacaaagttc
      481 tttaaccacc caagcttcta cacctgcaaa caacgacaca agcaaactta cagatgataa
      541 tgcaagcgct gatttacaag ctgccgctgc aatggacgca agattgcaat ttatactaga
      601 taacatctct accaaatttt cacaggcagc taatgctttt aaagaaaaaa actaccaagc
      661 tagtaaagat tttttaaatg atgccttatt tagtgattat cgcaatacca aagtagaaat
      721 tttagtaaat aaatttacca aagcaggaaa cgatcaaaaa attcaacaag ccatacgcac
      781 ccttatacgc caaatcaacg atgcaaaaat agatgaaaaa ggcttaagag atggcttaga
      841 taacatagaa gaacaaattt ttgatgtttt cttacaaatt ccaaattcag aactttcaag
      901 tttgcaaatt tcaggcttta atgatgaaac aaaaggcaaa gattatgcca aagtttctaa
      961 tgatatcaaa cttgctttag atgaaatttt aaaaaattat gatggcttta gtgcttctat
     1021 agtagatgat ttacaaggaa tttatctaga tatttttgaa gcaagcggta tggaaaataa
     1081 aatcggtgct gtagatagtg gcttaaaact taaaatagaa agtttatttt ccaaaggtgt
     1141 ggcactgatt aaagcaagtg cagataaaaa agagcttgaa gctactttta atgacttaga
     1201 acaactcata gcaagcagtg tggataaaat tcaagattct actccttatt cgctgtttat
     1261 atgggcttta ggtattattt tgcgtgaagg cttggaagct ttgattatcg ttgtagccat
     1321 tgtttcttat cttgtgcaaa gtggtaataa aaatcgtcta aatatcgcct atagtgctct
     1381 ttttacagga gtgattttaa gttttgttac cgcttttgga gtttcttggc tatttaaaga
     1441 aaatgcagga caaagtagag agcttataga gggtattacc atgcttatag ccgtattact
     1501 actcttttat gtgggctttt ggttactttc aaacgcacaa aataaaaaat ggacaagctt
     1561 tatcaaacaa ggtgctatag atgctatatc aaacaatagt gcaaaaaccc tttggattac
     1621 cgtattttta gctgtttata gagaaggtgc agaaactgtg cttttttatc aagccttgct
     1681 ttttgatgct aaaacaagca ctgattttag tgctgttttt ggtgggcttg gacttggaat
     1741 tttaatactt attgttttat attttctttt aaaagcagga gccattcgca tacctgtaaa
     1801 acaatttttc tatatcactt cttacattat tttttacatg gtttttgttt ttacaggcaa
     1861 aggcatagct gaactcatag aaggaaaagt cattattcct agtcttatac ctatgaattt
     1921 tgaaccgatt ttatggcttg gaatttatcc ttactatgaa accttaatcc ctcaatttat
     1981 agttttgatc atgctaatta ttggcatttt aataacaaaa caaatttcaa aaaaaggagt
     2041 aaaatcatga taaaaaaagt tttatcagta gttgctgcag ctgcggttat tagtacaaat
     2101 ttatttgcag gcgaagtgcc aatcggcgat ccaaaagaac ttaatggcat ggaaatagcc
     2161 gctgtttatt tacaacctat tgaaatggaa ccaagaggta ttgatctagc tgcgtcttta
     2221 gcagatattc acctagaagc tgacattcac gcacttaaaa acaatccaaa tggttttcca
     2281 gaaggttttt ggatgcctta tttaaccata gcctatgaac ttaaaaatac cgacacaggt
     2341 gcgattaaac gcggaacttt gatgcctatg gtggctgatg atggtcctca ctatggcgca
     2401 aatatcgcta tggaaaaaga taaaaaaggt ggctttggcg taggaaatta tgaacttact
     2461 ttttatatct caaatccaga aaaacaaggt tttggacgcc atgttgatga agaaacaggc
     2521 gtgggtaagt ggtttgaacc ttttaaagta gattataaat tcaaatacac aggcacgcca
     2581 aaatgatttt acactcggat tttccgagtg tttaaatatt tttattttta ttgaaaaatt
     2641 aaaataacaa tgtttaaaga gtaaattatg agtatatatt ttgtgcattt tcttatcagt
     2701 gttttaccgc taagtatttt aatggccttt atcactcctg ataaaaaata tatttttaaa
     2761 agttttttag tagttttttt gggcttttta tttggatatt ttgctttttt tatcgcagca
     2821 caatttttaa aaaccgaaaa tttaatcttt aattttgatt ttgtttttat aggtttattg
     2881 ctagtaagct ttatatttta tttttggaaa aaaattgaaa ttttaaattt tattttattg
     2941 ggaattttaa gtttttgcac cgctttgcat tattattttt taagtcaaga tttccctatt
     3001 tttactagtt ctttaatcga tagcgaaggt ataagttctt taggttttat tgctttagcc
     3061 ttgcttgttt gtattttgat tttcttcttt ttaaaatggc aaaaaaattt taatcaaaaa
     3121 acaagcttta tgctgttttt actgcttatc cttatagaaa gcgataaagc tctagccaat
     3181 atcttgctta ctttaatgcg aaattccatc atagaaactc atactttttt ggtgagtttt
     3241 gtaggaaaaa gtaattattt tggtgttttt ggaatttatg tttatttaat tttcatcact
     3301 tttttagcat tcttaagcct aaaaattcgc aaaaaaaata taagcaaaaa acaaatttta
     3361 gatataaatt atcgcaaaaa cgaagctaaa acaagtctta ttaatcgcta tttttccagt
     3421 gtttttatct cctgtgttat aagtttttgt attattttat acttttttat ggtaagctct
     3481 aagcctttaa ccatagatga gcctaaagaa attttaccca ataagaatgg caaatttatc
     3541 tttgatatag ctcttttaag ggacaacaaa ctccaccgct ttgcttatat cagtgctgaa
     3601 ggtaaagtga taaggttttt tcttatcaat aaaagagaag atagggattc tcctgtagct
     3661 gtttttgatg cttgtatgat ttgtggagat atgggctata tcaaaaaaga tggacaactc
     3721 atttgcattt cttgcaatgt gcgtattttc ttgcctagtg taggcaaaag cgggggttgc
     3781 aatcctatcc cactcaaata cgaatacgat ggtaaaaaaa tcaccataga tgttaaagat
     3841 gtaatagcag gatctaatta ttttagtcaa atcaaagaaa ttgaagtgca agatcctgta
     3901 tcaaaaacaa aaattataaa cacccaagct cctttttctt atagctataa agggattact
     3961 tattattttt caaatcaaaa caactatgaa gaatttaaaa aagatcctac aaaatatgta
     4021 gaagaaaacg aagcccaatt tttaatccaa aggagaaatg atgttggcta aaatgatttt
     4081 taactctata tttaaaaaca aaattcaaaa atttttagcc tttcttactt gttttttagc
     4141 cacgcttttg ctctctacta tgctaaatat taccctaagt ataggcgatg aagtaactaa
     4201 acaactcaaa agctatggct ctaatatcct tgttttaccc aaaggctcaa gtcttagtat
     4261 agaaataggt aatgaacttt atgaaccctt aaaaaacaaa aactacctag aagaaaaaaa
     4321 tttatatatg attaaagaca tttattggcg taacaacatc accgcacttg ctcctttttt
     4381 agaaggtaaa atcacaattg aaaactccca gcaaaaagca cttatttatg gcacttattt
     4441 tcaaaaagcc ataaaaatta aagatgatga tgattttatc acaggtataa aaagtcttta
     4501 tccttattta gcagtgcaag gagaatgggc aaaagatgat agcaatgaaa tcatgctagg
     4561 cgaagacttt gctaaaaaca ataaactaaa attaggagat actatcgaac tcacaggaga
     4621 aaacaatcaa agcaaagaag caaaaatcgt aggcatttta cttcatgcca atcctaaaat
     4681 gtcaaataaa atcatcgctc ctttaaattt agctcaagat ttactcaaca aacaagggct
     4741 ttactcaagt gcagaagtaa gagcttttac catacctgaa tcagcccttt ctgaaaaagt
     4801 gcgtcgcatg ggcgaagaaa aattagatca gttagaatat gacaaatggt attgctcagc
     4861 ttatgtaggc tcaatcgcta gtcaaattag cgatggctta ccaggtgctg atgcaaaagc
     4921 tctaaatgct ataagcgatg ctcaaagctt ggtggttaaa aagatccaat ccttaatggg
     4981 cattacttgt attatttgtc ttattgttgc aagtattgcg atttcaagtc tgatgagttc
     5041 tgaaattcat cgtagaaaaa aagaaatagg acttttaaaa gtgcttggtg ctaatacttt
     5101 tcaaatttat ctcatctttg ctagtgaaaa tttaatcgta gctttatttg ctgctttatt
     5161 tggctttatt tttggcacag cactttctca aatcatcagt cttagtattt ttggatattt
     5221 tattgatata gcctttatag ctttaccttt aagctttatt tttgcaggac ttattgcctt
     5281 actaggttgc ttgcttccta tcaaaaatat cacacaactt tcagctgcag gagtgcttta
     5341 tggtagataa gtttttcctt aatgagcttt ttaaaagcat tagcttttct tatcaaagac
     5401 tttttataat agttttaagt gtttttatag gagcacttac ttgctcagct tttttaaata
     5461 tttattttga tattgacacc aaactttcta aagaattaaa agcttatgga gcaaatgtaa
     5521 tgataagtcc taagcaggat gaaaatttta tctccaatgc tgagtatgaa aaaataaaag
     5581 aaaatttaaa ggctagggct ttaactcctt ttttgtatga ttttttaaat ttaggcagta
     5641 caagcggagt ggttttaggc actgatttta gggctttaaa aatcaccaaa ccttttttag
     5701 aagttaaaga aggaagcttt tccctaaatg attttgatga aaattcagcc tttttagggg
     5761 ttaatttagc caagcaactg ggcctaaaaa caggcaatga acttcaaatt tacaatccaa
     5821 acaatggaaa aagcataaaa cttaccataa aaggcatact ttcaagcaat gatgaatttg
     5881 atagcattgt tttagctcct ttaagcgtgg tgcaaaattt aagcgataga gccggtatta
     5941 actatgctaa tgctgtagtt tatggaaatt ttgatgaagt taaagccaaa acacaagcaa
     6001 tcagcaatga attcatcgat gcaaaaccta tatcttcagt atccttaagt gaaggtttag
     6061 tgcttggaaa aatcaaagct ttaatgtttt taatcatact tgtagtattg atcatagtca
     6121 ctactagcgt taatacgacc ttaagctcta ttatattttc tcgcaaaaaa gaaatcgcac
     6181 tgcgtttagc cttgggtgcg aaaaaaagtg aaatttttaa actttttgct agtgaatgct
     6241 ttatagtaag tttttttgct agtttaatcg gagctttttg tgggatattt ttagccaatg
     6301 tctttggtta tttgattttt aattctagta ttgattttag atttatagct gtttttatag
     6361 ccttaatcat ttctttgatt tttgcctttt tggctgcatt ttttcctata aaaagagcat
     6421 taaaaatcaa tgtgtgtgaa aatttgaaag gtgaataatg aaaaaagaac ttattaaaat
     6481 aaacaactta aataaagaat ttggcaaagt taaagcctta aacaatatca acttaagcgt
     6541 ctatgaagga gaatggcttg ccatcatggg tccatcagga agtggaaaat caacgctttt
     6601 aaacatacta tcactcatgg acactccaag ctctggggag tatatcttag acaatgaaaa
     6661 cctagagcaa atggatgagg agcaaaaaat caccttacgt cgtgaaaaaa tagggcttgt
     6721 ctttcaacaa tttcatctta tcccctatct taacgcctta gaaaatgtta tgctctctca
     6781 gtattatcac tcaagcgtag atgaagaaga tgctaaaatg gttcttgaaa aagtaggact
     6841 ttcgcacaga ctcactcatt tacctagcca attaagtggt ggagaacaac aaagagtttg
     6901 catagcaaga gctttgatca acaacccaga gcttttactc gcagatgaac ccacagggaa
     6961 tttagatgaa gccaatgaac aaatcgttct tcaaaccttg caaaaattaa aaaatgaagg
     7021 caaaaccata gttttaatca cacacaatcc tgatttagcc aaattcgcag atcgaaccct
     7081 tatcttacaa catggggtgt taaaatgaaa aaaagccttt taatcttaag cattttgttc
     7141 ttgctcaatg cttgttcttt tgaaaattca aaagatactg gaaaagttgg agaaaaaagc
     7201 gctgaaattt cagctaaaga taccttagga aaagctgtaa aacttgctga tgataataca
     7261 agtttaaaag ttttggtctt ttttcaaaat ggctgccctt cttgcttaaa agaactccct
     7321 tctttagatg aattcataca aaatcacccc aataaaatca gtgtttatgc tataaattcc
     7381 atcgataatg ccaatgtggt taaggtttta gccgaacaat ttgactttaa aaatgtaaaa
     7441 gttttaaaag acgatcttaa aatcaccaat gatcgttatg ctgtgtttgc aacccctact
     7501 accatcatca ttaaagatgg gatgataaaa gatagaattt taggagaaaa accatgggaa
     7561 tttttcgaat ccaagcttat ttctttgctt taattatagc tttatttttt gtagcttgtg
     7621 atagtggaga aaattttaaa gctttaaata gtgataaaac ctataatttt gcctacaatg
     7681 gttttgaaaa aagcctaaaa ctaaatgata aaacacaaaa ttttgcctta gtatttttca
     7741 caaaagattg tggagtttgt aaagaacaaa ttcctatttt gcagaatttg gctaaaaatt
     7801 atgattttaa tatctttgtg gttttaggcg atgcaaatga tgcaaatgat gcaaaagctt
     7861 gggctgatga aaaaggttta tctaatttag caatgtttta tgaaaaaaga gcagctaaat
     7921 acctttcaag tgccattggg gaaatatatg gagtgcctgt gcttagtttt ttcaaagaag
     7981 gaaaaatgga tgaaaaattc ataggcttaa ctccttatag catacttgaa aaagaaatca
     8041 aaaaagtaaa aagctaaaaa tttactttaa agctttttat ctcctataaa atatccataa
     8101 agctcatagc ttccatcttt tttcatcaaa attacaggat atttttcact ataaccttgt
     8161 tccattcctg ggcttccttg cggcatgcca ggagctgaaa ttcctataac atctttaggc
     8221 ttgttttcaa gcaaccatac tatggcactt tcaggaacat gcccttcaat agcatagcct
     8281 tcgatcacac ctgtatggca actttgatac tcatctttta tacccatttt ttctttgatt
     8341 ttaagaaaat cattggtttt atgaacgcta acctcataac ccttagcttt catataatca
     8401 gcccaaagat cacaacagcc acaagtagga ctttcataaa cttgtatttc cttagcctgc
     8461 gtaagagtga gtaaaaaaag aatagttaaa attgtttttt tcataatcgc tatcctaagt
     8521 aaaaaatata taataatact tttataaagt taatatcatc acatttttaa cactaaaaat
     8581 gaatttacaa aaatttaatc aagaaaagat ttttaatgag tgctgatttt gtctttacag
     8641 caaagatata aaagataaaa cgatttaaaa aactagaaat ttttaactta aaaagcttaa
     8701 aatttagata tattttatac tatgtttttt atagtcaaaa cctttatggt gtgaaagctc
     8761 tattatttta gagctttcaa gtattatttg aaattatagc gcctcgtaga gataccagaa
     8821 cgacaattaa cattattgct taattttata ggtctatcaa gatgatcaca ttcaatatcc
     8881 cattcagcag cccaatttgt ttttctatct acaactaaga attcattata ataaacagtc
     8941 tttccttttg ctatttcttg tttcattact ttaaaactgc ccctttgaat aacattatag
     9001 tgttctggat catctttctt gatactttct atagcgtaaa tctctaagtt atcagtgtta
     9061 aattgatttt tcattccttc tttagcgtta tctaaagcta tttttgcata ggtatcatct
     9121 cctcctgata ctttaactaa attagaatca tgtatagtga taacccctgc aaatgctgac
     9181 acatttaaag caactaaagc tgccaaagct aaacctaatt ttttcatttt atctccttga
     9241 attgaatttt gtatatttta attatttttc aaatcttttg caagataatt tttaaattta
     9301 tctaaattaa atttgcattt tatctaacaa tcataagaaa ttttaaaatg aaataaaaat
     9361 ttatgagaaa tcaactcttg tttgaaaatg ataaaagtaa gtggtgcgga tgaaaggact
     9421 tgaaccttca cgcattgctg caccagatcc taagtctggc gtgtctgcca atttcaccac
     9481 atccgctaaa gtggtacgcc caagaggatt cgaacctctg acctacggct tagaaggccg
     9541 ttgctctatc cagctgagct atgaacgcat ataaaatctt ggtggtgcgc ccgataggaa
     9601 tcgaacccat aacctacaga tccgaagtct gtcgctctat ccagttgagc tacgagcgct
     9661 tagtggggtg agtgatggga attgaaccca cgaccctcag gaccacaatc tgatgctcta
     9721 accgactgag ctacactcac cattttgtat aaatttataa aaaatggtcg gggtgaaagg
     9781 attcgaacct tcggcccctt ggtcccaaac caagtgcgct aaccagactg cgctacaccc
     9841 cgaataaata aaaggaaata ttttatcaca aaataatttt aaagtcaagg attttcatct
     9901 cttattctta aaaaaaccgg aaagcgaggt aaggaatttt tggtcaatcc attaaattta
     9961 taagtcacaa tactaccaat ttttggagga ttttttctat cttcatcttt taaaccactg
    10021 cctattttaa tgatttgtcc attaggcatt ttacaaagta aggcacctac ttgattttca
    10081 aatttaccct tacccttgcg aaatcctacc aactcacatt ctgcatcatc atagggtttt
    10141 aatttcatag catttttact tctgcctttt tcataaggac ttaaattttt gcgtataaca
    10201 ataccttcac cttgattttt tataatgctt tcgtaaaatt gatttaaatt attttgattt
    10261 tcaactggaa tttgaggaat aatttttata taggcactag gatatttttg taaatactct
    10321 tctaaaacag ccaaacgatt tttaagagtg caagtagaaa tttgaaattc ttcgcaagca
    10381 tttggcacat caaaaatatt ataagttact tccttccata aggtcaaatt gctatcgcca
    10441 ctacgaatta aagctgaaat ttcatcaaat ttatttcttg ctatccaaag ctcaccatca
    10501 atagcaaaag gagggaaatt ttttgtaaaa aagtcaggag tttttatttt gtaattttgg
    10561 cgagttttta gatatttccc atcccaaatt ccacgcaccc catcaagttt ttcgctcatc
    10621 aaataagcat taaaatcttt agaattaaaa tcttgcttat cgaatttgct aagaagtaaa
    10681 atttcattag caaaaactaa acaagcacaa catattaaaa aaataaatct catcaaagca
    10741 gattaatcat atatccagtt gcatcttttt gaatattata attataagtt ccatcaagat
    10801 atattacaag tcgataatat cctttatgag atccaaagtc tatgcgttta aaaatagaat
    10861 tactaaggcg tatgtttttt gtagggctaa tcaaattaga tctaaaatct ataacgattt
    10921 tacttggatt tcctactgaa aaatctgtga tcatttcatc actagtgtta agttttattt
    10981 tgtttttata aaccgcgtaa gaaataaaat cataaatctt tgcaacctgt aaaggtattt
    11041 caacattggc tgttgagttt gattcttgtt tagagctatt tttttcaggt atagtaactg
    11101 aaacatcaag tacttttgaa ggatcagggc ttttaaatct tgatatagta taagtatcgt
    11161 gccaatcaat acttttatta acatctaaat cgatcttatc ttcacttccg tctaaattga
    11221 tataattaaa agtgatgctt tttaaaattc ttgcactaga attaaattta acttcctctt
    11281 tttgaaattc aggtggagca accaaggtta tattttgatc tgtcttgaaa ggattttcat
    11341 cagcatataa aagagaggta aaaataaaaa atattgccaa aattctagtt ttcatttggg
    11401 tataatcctt ttaattcaaa ataatctttt tgtgctttag cattttgttc tttgagcaaa
    11461 ataatctttt tattaagctc ttctttggta ttttctaagc ttaataaagt atctaaagaa
    11521 tactgcccaa aaaacatatt gccaaaataa atcgctccaa ttacaacaag aaaagcccaa
    11581 aaaatcattt ttataacatg ggtataaaaa cttttttttc ttgtgctttc gtcgtattct
    11641 ttaagtaaat cgctcagagc ttttctccta agtattcatc gctttcaagt tcaatttcaa
    11701 gcaagcgatt gtattttgcg gttctttcac ctcttgctag ggctcctgtt ttgatttgtc
    11761 ctgtatttaa agccacagca aaatccgcta taaaagcatc ttcactttcg ccgcttctat
    11821 gactcatcac acatttatag ttatttcttt gcgctaaacg cacagttctc atagtttggg
    11881 taatagttcc gatttgattt ggtttaataa gcacagcatt tgccattttt ttgatgatac
    11941 cttctcttaa aatatcttca ttggttacaa acaaatcatc gcctacaagc tgaattttat
    12001 tgcccaattt ttcagtaagc ttgatccaac cttcaaagtc attttcagct aagccatctt
    12061 cgatactgca aattggatat tttgcacaaa gttctacata gcgttcgatc aaatcctcgc
    12121 ttgaaaaagc cttgccttcc atgtgatatt tgccatcttt gaaaaattct gtacttgcca
    12181 catcaagagc gatttttaca cgattttcat aacctgcttt tttgatacaa gtcattaaaa
    12241 ggtcgatagg ttctgtgttg ttagctaaat ttggagcaaa accaccttca tcacctaaag
    12301 ctgtagaatg tccagaattt gcgagttctt tttttaatat cgcataaatt tcacaaactg
    12361 aacgcaaagc ctctttaaag ctagtaaaac caaaaggcat aatcataaat tcttgaaaat
    12421 ctacattgtt gtttgcatga gcaccgccat ttatgatatt acacattggc acgggtaaaa
    12481 tgctcgcatt tgcaccacct aagtaacgat acaaaggcat tcccaaagca gccgcagccg
    12541 cacgagctgt tgccatggat acgcctaaag tcgcatttgc acctaaattt gagtaattat
    12601 ttgttccatc aagctcacgc aaagtatcat caagttgagt ttgattaaaa gcatctagtc
    12661 ctaaaatttc atctgcaatg gtctcattga catttgcaac agcttttaaa acgccttttc
    12721 cgccaaatct ttcatcatta tcacgcaatt ctaaagcttc ttttgaacct gtacttgcac
    12781 cacttggaac tatggccgca cctacacttc catcgcttag cgtaacttcg gcttttacgg
    12841 ttggatttcc tctactatca agaacttcat aggctctaac atcttcaatt actaacatta
    12901 ttcttctcct tcgtcatctt cgctaccgct gatcatacct tctattccca tagaattttg
    12961 aattgctttt gtgatttcat ctgcaatttc agggttttct tttaagaaag cttttgagtt
    13021 ttctctacct tgtccaagtt ttttatcttt ataagaaaac cacgcaccac ttttatctac
    13081 gatatcaagt tttacaccat aatcgatcaa ttcaccttca cgacttaaac cctctccaaa
    13141 catcacatca aattcagctt gtctgaatgg aggagcaact ttatttttaa ctacttttac
    13201 tttaacgcgg tttcctatag gttcttcgtt ttgttttaag gttgctactt ttctaacatc
    13261 taaacgcaca gaagcataaa attttaatgc atttccacct gttgtggttt caggagtacc
    13321 ataacccata gcaccgattt tcatacgaat ttggttgatg aaaattactg tggtattcat
    13381 tttatgaact atacctgtaa gttttcttag agcttgagac ataagtcttg cttgaagtcc
    13441 tacatgttga tcgcccatat cgccttcaat ttctgctttt ggggtaagtg ctgcaacgct
    13501 atctactaca ataagatcta ctgcaccact tcttgctata gtttctacaa tttctaaggc
    13561 ttgctctcca aaatcaggtt gagaaacata caaatcatct gtatttacac ctaaattttt
    13621 agcatatttt acatcaagag cgtgctctgc atcaataaaa gcacaaactc cacctgcttt
    13681 ttggcattct gcgataatgt gtagagttag agtggtttta cctgaacttt caggcccata
    13741 aatttctata attcttcctt ttggaacacc gcctatacct aaagcaagat caagtccaac
    13801 tgaacctgtg cctatgctat cgatttgctc gacttcttta tcccctagtc ttaagatagt
    13861 gccttttcca aaggttttat ctaaactttt tagggcagcg tctagagatt ttcttttatt
    13921 atcatccata actttcctta aaaattctaa atttttagtt agaattctaa caaaataaaa
    13981 ttaaataatg atttattttg ctagaattaa agcaaagatt taaaggaagc atagatgaaa
    14041 aaaattacta ttgcacattc tcctgatgct gatgatattt ttatgtatat ggctattaaa
    14101 tttgggtgga tagggaatga ttttgcttat gaaaatacag ctttagatat acaaacttta
    14161 aatgaatttg ccttgaaaaa tgaatttgat gctacggcta tttcttttgg gctttatcct
    14221 ttaatcgctt ctgagtatgc gcttttacgc acagcagtga gttttggtga aggttatggg
    14281 ccaaaactca tcaagaaaaa agacacgcat ttaaaaagaa attttaaagt cgctttgagt
    14341 ggagcaaata ccaccaatgc tttgattttt cgtatgaaat accctgaagc aagaattatt
    14401 tataagaatt ttttagacat tgaaaatgca gttttaagtg gcgaagtaga tgcaggagtt
    14461 ttaatccatg aaagcatttt agaatttgat caaagtcttt gcgtggaagc agaactttgg
    14521 gatatatggc ttgaatttgc taaagaaaat ttgcctttgc ctttaggtgg aatggctttg
    14581 cgtcgctctt tgcctttaag cgatgcgatt aagattgaaa gagatttaac ctatgctgta
    14641 aaaattgccg atgcaaatcg taaaatttta gcccccatgc ttatggaaag aaaacttatc
    14701 cgtgttaatg aagaaaaact tgatacttat cttaatttat atgccaataa aaactctatt
    14761 agcatgaatc aaactcaact tttagctgta gatacgcttt ttaaactagg atatgattat
    14821 aaattttatg ataaaatcat acatgtaaat gattatctta tccctagcga atacgaagaa
    14881 gctagaaatt cttaaaaagg ataaaaatgg acgaaagtac cttagttgct cttggagtgc
    14941 aaacctttaa aatcacactt ttgctttcct tgcctatgct tttagcaggg cttattgcag
    15001 ggcttgtaat cagtattttt caagcaacta cacagattaa cgaaatgaca ctttcttttg
    15061 ttcctaaaat catcttggtt gtggttattt taatcttttt aatgccttgg atgactacaa
    15121 ctatgattga ttttactgag aatatactaa atcaaattcc aacttttatc aaatgatcat
    15181 tgattttaaa aaatactctt ctgtacgtat aggaaatgaa tttgaagttt tagttttgga
    15241 tcaaatttgt gattttgatg gttttttaat aggtggtgca aacaaccttt taattagccc
    15301 aaaacctaaa aatataggaa tattaggaga tggttttgat tttatacaaa ttttagatca
    15361 aaataaagat tttatacatc ttcgcatagg ctgcaaaaca aaatcaagca aaatgtatcg
    15421 ctttgccaaa gaaaataatc ttaagggttt tgagtattta agcaaaattc ctggcacact
    15481 tggtgggctt ttgaaaatga atgcaggact taaaggagag tgtatcagtc aaaatttaat
    15541 taaaattgcc acttttcaag gcgaaattct aagagaaaat ataaattttg attatcgttt
    15601 ttgtccttta aatatgcctt ttttttgggc tgaatttaaa ttaaatttcg gttttgatat
    15661 ccttaaagat gaagctttaa aaaatgcaag aagcaaccaa cctagtggag caagctttgg
    15721 ctctatcttt aaaaatccaa aaaacgactt tgcaggacgt ttaatcgaag ctgtaggact
    15781 taaaggattt agcaagggag atgctatgtt aagcgataaa cacgcaaatt ttttaatcaa
    15841 taaaaaaaat gcaagttttg aagatgcgtt ttttcttatc gaattggcta gaaaaaaagt
    15901 ctttgaagaa tttggcataa acttagaaaa tgaagtgatt attatctaaa aatttttcaa
    15961 tatatcttta aattaattga tagttaattt taattttttt atttcattat ctataacact
    16021 agctaacatt tttggcattt gatttacaat atcttgataa ttttgttttg catcttgatc
    16081 ttttaatgtc aaatttaatt ctgcattttt tgctgcaaga atttttccat tgcttgtaga
    16141 aataatttta aaattaacat tagccacacc ctctttacta gttgtgataa aataatttgt
    16201 aatatttaca taaaaatctt gcaaatttac caccacaaca taatctgtaa atttggcata
    16261 cattttagcc ttatcttttt cttgtgttaa aaaaggactt acatttataa gttttgcatc
    16321 tttagggcta aaatatgaca aagttttagg actttgataa ataccatttg cagcagaatt
    16381 aacccaatta agctttaagc tttgaatcaa atttttagca aataatgtag aaaattcctt
    16441 atcactcacc ctaaaaccat ctaaaaaata accaaaattt ttcctagaag ttaatacaat
    16501 agcaaaatca atatcctcat ctttggtgat ttgcgatttt ttttcaatta aagtagaact
    16561 atcaaacaat gctttttgtt gatttaaatt tggatttgca acattttgat ttagatctat
    16621 tacttcaaag ctatctgcgc ttttttcaat tttaataacc tttttctgag aaaaattatt
    16681 cgctaaaaga ttagaactta aaactaaact taaaaacaaa atgaaacaat acctcatctt
    16741 catccttata aactatttaa atataaaatt atactcttta ttttataaaa aatcttgtaa
    16801 aaaattccta gatgaaacac aaataaaagg actggattta taatttaaag ggttatataa
    16861 aatgtatttt ttagaaaaat cccccataaa tcctccattt tgattaatca aaaaatctcc
    16921 tgctacaata tcccaaatat taagcttttc aaatctttta taaactcctg ccctagcctc
    16981 taaaatagca caaaatttca atccagagcc tatattaata gcttctaatt gatgctcttt
    17041 tgcaaagtct tcatcttctt tactaagatg attaacactc aataaggctt tatatttatt
    17101 tttctcgtat tcttgctggt caatttgcaa aggtttatcg tttttataaa ccttggtttt
    17161 tgcatgagca tagaatatat caccttttga tggattttgt ataagcgata aaacagggcg
    17221 attgtcatga actaaactta tcataacgca aaattcatcg ctgcctttta aaaaaccact
    17281 tgttccatca agaggatcga taagccaaaa agtttttaat tcttcacact cttctttgct
    17341 gagtaatttt tcttctgata aaattttaat atccgtagaa cctaaaatat catttagaat
    17401 tttattagaa gcaagatctg ctgatgtaag cgggctttta tcttcttttt cccaagtttt
    17461 gaaatttttt ctctcttcta aaatagcttt agaagcttga ttgctagcat ttatagcaat
    17521 ttctaaaaat ttatcaagat taagcatgat tataagactt tctataagat tttttaaaat
    17581 tatacaagaa gattttgtgg aatttttaat ttccacaaaa attttaatta aattttacta
    17641 gtttcaccca aataaagttg tcttggacgg actattttaa gactttcttg ctctttttgt
    17701 tctatccact gagctatcca tcctggggtg cgtcctataa caaataaagt agcaaacatt
    17761 tcatttggaa tacctaaggc ttttaaaata agtccactat gaaaatcaac attcggatat
    17821 agccctcttt gaacaaaata atcatcgctt aaagcaatct cttctatacg cgttgctact
    17881 ttaataagat tggtatcaat acccaactca tcaataagtt gatcacgaag ttttttaagt
    17941 acttttgctc taggatcaaa atttttataa accctatgcc caaagcccat caagcggaaa
    18001 ggatcgtttt tatctttagc tcttttgatg aattcatcta ctctatcaac actacctatt
    18061 tgctcaagca ttctaataac accttcatta gctccaccat gtgcatgacc ccaaagcgca
    18121 ccaatacctg ctgctataca ggcataagga tgagcatgag ttgaacccac agcacgaacc
    18181 gttgaagttg aagcattttg ctcatgatct gcatgaagca taaaaactgt atcaagtgct
    18241 tttacttcta taggtttaag ctctacatga tcgtaaggat aagttcttaa catatataag
    18301 aaattttctg taaaaccacg atctaaattt ggataagcca taggaaagcc gtgtttatat
    18361 ctataagcgg tggcgactat agtagggatt ttagctacta ttctagctgc catttccata
    18421 tattcttctt ttacattcat gtttaaatga tcaggataaa aagcactaag cgatgaaaca
    18481 gcaccttgta aaactgccat aggatgagca ttatcaggga aagaatcaaa aagacgatgc
    18541 ataccttcat ggataaaaga acgttttttc atttcataac gaaatgcttc aagacgcgta
    18601 gcatcaggta attctttata aagcaaaaga tgaaccacat ctaaataaag tttgttttca
    18661 gcaagccact ctataggata gccacggtgc attaaaattc cgttttctcc atcaatataa
    18721 gtgatttttg atttacaagt agctgtagaa gtcaagccct catcataaga aaacattcct
    18781 gtttgtttat aaaaacttga catatctaca acgcttgggc cagttgtacc atcatatata
    18841 ggaaattcat agctttttcc atttctatta tcggttatag taacggaatt tgacattttc
    18901 gctcctttta ttgttacttt tattaattct aacaaaaaag gacgattatg agttttttta
    18961 ttattaaatt tttaagattt tgtttgcttt tttgagtaaa aaagtaactt tcatttttta
    19021 gaattagaaa gaaatttaat catactcata acaataatag cctcaaataa cgctgttaaa
    19081 ataagcgctg aataaagctt ctcatcaata accttgcccg aataacccag agtagctgtt
    19141 gctataagca aggttaaagg catagaatga ctaagaccaa ataaaatcat atttttaaaa
    19201 ccaattcttt ttaaaaaaac acttgcacat aaaattctta aacccaccat aacaaacata
    19261 agtaaaaatg cttgtaaaac gattttataa tctaaaatca ttttaagatc aaaggttgaa
    19321 cctatatgga taaaaaaaat agggatcaaa aacccatgtc caaaagtaga aagcttatgc
    19381 tcaagatctt ttttatgatc aaaaaaagta gctataaatg agcctgctat aaaagaacca
    19441 agaacgattt caagttttgt aataaccata gcaacaatga tcagtataaa aatcgccata
    19501 caaaatctta tatctttttc atttttatct tcccatggca taagcacaac tttaagctga
    19561 ggataccacc aaaaaagcac accaagcatt ttaaatccga gcaaacaaag tcccaaaaag
    19621 atattaagat ataaaatact ttgcgctaca tcaataatac ctgttccttc gcgcaaaaaa
    19681 gctcccgcta tagtcaaaag cacaatagaa atcacctcag ctaaagtagc tactatcata
    19741 gcaatattta gccaataaca ctcttttcca aaatccttaa aaagcaaaga taaaagccct
    19801 acactcatca caggtataat gataacaaat actaaagaaa gtccaaaaat ccatactata
    19861 agagaagata aagcgtaaag taaaaaaata taaaaaaaac tttttttggc gacttcttta
    19921 tccatattaa aaaaggctct taaatttact tccatacccg ctataaacat tagataataa
    19981 aaacctacat tggctaaaag tgcaaaattt tcactttttc ctataaaacc aaaatatgca
    20041 attaccgcac ctaaaataat ttcagtagct gaaagaggca agcgtaaaat ttttgcaata
    20101 tgcggagaaa aaagtaagca taaagctata acaataagaa tttttagatc aattaaacct
    20161 tgcggatcaa tgacactctg atgcaaaagt aaatcccatt tcttttaatt ttattatatc
    20221 ttgacttggt tcttcacctt tagtggttaa ataatcccct ataacaatag ccccagcacc
    20281 tgcttgaaaa atttcatact gcctttcttg caataccact tcacgcccac ctgctaccat
    20341 taccacgctt tgaggcaaag cctctttggt gtcacgcacg atttttaaag cttcatcagc
    20401 actaagcctt ggaacttgta gttttaaatt ttcattggct ataaaaaaat taataggtgt
    20461 tgaaaaaggc tgtaattctt gcaaagattt tctaaaactt agtctatctt cttcactctc
    20521 acccatacca taaattccac cacaacaaag cataagtcct gcttctttag cgtttaaatt
    20581 ggtttgaaat ctactttccc aagtatgagt ggtgcaaatt tgtggaaaaa attccttaga
    20641 agtttcaaga ttgtgattat aagaaaaaat tcctgctttt ttaagttctt tgagttgttc
    20701 cacgcttgcc ataccattac aggcaattaa aagcaaatta ggcacttctt tttgcacagc
    20761 cttagcagcc tcacaaacat actcaagctt ttcatcatca agcccaagtc ctgctgtaac
    20821 caaacaaaaa cccaaggctt catttttctt tgccattttc gcttctaaaa cgatttgtga
    20881 aagttctttg cgacgatatt tttgaatatc tgtttttaca tgggcacttt gggtacagta
    20941 tttacagtct tctgaacaat ttccactcgc tatatttgaa atagcacaaa gcatgatttg
    21001 cattctaatc cttcatttct tttttgattt tgcactttaa gcattctagg aatgtacctt
    21061 ttttaagctc ttttatcact aaagtttcgc cacactcttc gcatttttct tcacttggtt
    21121 tgtatttgct tataaaattg cattttggat aagcactaca gccataaaat ttaccgcgtt
    21181 ttgaaaagcg ttctacgatt tcaccttttt gacaacttgg acaagtaata cctgtaccat
    21241 tagctttagc ttttgcggca gtattttcgc tttcattttt actttcactt tttaaatttc
    21301 ttgaatactt acattttggg aaatttaaac acgctacaaa ttctccaaaa cgcccttttc
    21361 taatagcaag ctccccgcca caatcaggac aactttcacc tagttttgtg acagtttttt
    21421 gactagcaat ttttgttttt ccttcttcga tttttctcat aaaaggatag taaaattctt
    21481 ttaaagtttc ttgccaatct gccttatctt cagcgatttc atctaaagta ttttcaaggt
    21541 ttgaagtaaa tttactatct actatatcgc taaaattttt ttcaagcact tcggttacat
    21601 taaaagcaac atcactagga atgagttgtt ttttgtctat ttttacataa tcacggcttg
    21661 taagtataga aattgttggt gcataagtag aagggcgacc tatgcctaaa ctttcaagtt
    21721 tttttacaag tcctgcttct gaataccttg aaggtggttc ggtaaaatgt gagttcattt
    21781 ctaaattttg tatttttaaa ttttcaccta ttttaagatt tggtaaaatt ttatccttat
    21841 ccatatcacc ataaacttta taatatccat caaaaaggat ttttctaccg cttattttaa
    21901 aaagtgctct atcatttttt acaaatacat tttgagtttg agagatagca ggattcatct
    21961 gacaagctaa aaagcgattg taaataagtg tgtaaagttt taactcatct ttgtctaaaa
    22021 atttggccgc aatttctgga gtaaaactta aatttgtagg gcgtatagct tcatgggctt
    22081 cttgagcacc tttagccttt gtagtatata catttgcttt gcttggaaga tagtctttgc
    22141 caaaatttgt ttgtatgaat tttcttgcat tttctatagc ttctttggct aaatttaaac
    22201 tatcggttct catgtaggta ataaccccca tcacgccttc atgggtattt actccctcat
    22261 agagtttttg agctatcatc atggtttttt tagggttaaa accaaggcga ttgctagcac
    22321 tttgttgcaa ggttgaagtc ataaaaggag gtggtggagc gatttttctt tctttgcttt
    22381 caatgtcgct tatagcataa gcttcatttt tacaagcctc tagtataagc ttagcacgat
    22441 ctttgttggt aatggtaagt ttttctatct tagctttgtc aaactcaacc agttctgcat
    22501 ctaaatcttt ttgaaaaatc atatctatac taaagtattc tagtggcaca aaagcacgaa
    22561 tttctttttc acgatcgact atgatcttta aagctgcact ttgaacacgc cctgcgctaa
    22621 gccctctttg aattttttgt cctaataagg ggctgagttt atatcctaca atgcgatcta
    22681 aaaggcgtct agtttgctga gcatttacag agtgcatatc taattttctt ggatttttta
    22741 aagcattttc tatagcgttt ttagtgattt catgaaaaac aatgcgtggt aaggtgtttt
    22801 catcttttcc tatagctttt gcaatatgat aggctatagc ctctccttct ctatcctcat
    22861 ccgttgcaag ataaacttct ttggcatctt tggctttgct tttaagttct ttaactaagg
    22921 cgctatgatc acttgtgatt ctatactcag ggataaattc atcatcttct attttaatcc
    22981 caaagcttga tttaggcaaa tctctaatat gtcctttaga agcgataact tcataatctt
    23041 ttcccaaaaa atttcctatg gttttagctt ttgcaggaga ttctactatg attaaatttt
    23101 tcttcatttt gcacccttgt taaataaaaa gctgaattta gctaaaaata tttaaaattc
    23161 ta
//
LOCUS       DAPWGO010000021        22932 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.022, whole genome shotgun sequence.
ACCESSION   DAPWGO010000021 DAPWGO010000000
VERSION     DAPWGO010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22932
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.022"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            111..1088
                     /locus_tag="RJ336_000700"
     CDS             111..1088
                     /locus_tag="RJ336_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HDZ5213163.1"
                     /translation="MLKRLALLITLSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQK
                     DFWLSEIGDKNISLGYYDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEIITGLMG
                     DKKIEGDLKTPVGFYELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYP
                     LDGSRLDEFKTRGCIALFNNNLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADL
                     FTWKLAWTNSDTNTYLSFYDEQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINI
                     SPYPNLENETMYRISFYEDYYTKNYQFRGDKILYVKIDSKGKMKILAEQ"
     gene            1089..2075
                     /locus_tag="RJ336_000701"
     CDS             1089..2075
                     /locus_tag="RJ336_000701"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDZ5213164.1"
                     /translation="MSLIKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLL
                     APLAKNLGVSFVAVKSEEEAQEIEEFFENILILSHRPHGNENSRFIYALNDISQVKKY
                     KQDIKIHLKIDTGMHRNGICVENLEHAIDLIRSSDLKLTGMFTHFASADEMDGSFFVQ
                     KENFQKAKKIVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGDSNLKRVLS
                     LYAHRLSQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFRYNGKGELVLGNGKV
                     MLGKMSMDSFSCENSGEEICVFKDADIWADFFHTINYEILVKLNPNIQRVLV"
     gene            2078..2545
                     /locus_tag="RJ336_000702"
     CDS             2078..2545
                     /locus_tag="RJ336_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HDZ5213165.1"
                     /translation="MFNIVLVHPRIPQNTGSIGRMCFNAGFKLHIIKPTVFDISQKAV
                     RRAGLDYWDKLEPIIWENLEEFLNENMIYKNRFFFATTKSQKAYFDAEFQKNDFLFFG
                     SESYGLPMELMQLNWENAITIPMKSYGRSLNLATSVGIISYEALRQNFSNFVS"
     gene            2649..4115
                     /locus_tag="RJ336_000703"
     CDS             2649..4115
                     /locus_tag="RJ336_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HDZ5213166.1"
                     /translation="MNLDIMLDFANKASDIIANKIVPNTDIIMVVLLIVCGLYYSFLT
                     RFVQFRMLSSVFKILTEKNEGHTKEHISPFQALMISTASRVGIGNIAGISLALATGGA
                     GALFWMWVMAFFGGASAFAESTLAQVYKSKDDTGGFKGGPAYYIKKALGSHFFGAFFA
                     FILIITYAYGFNGLQSQTMTSSFKVYYDMFNPNAAVDFASSSWPMIIGIVLTIFGAWM
                     FFSHHTKIGKISSLIVPFMALAYVLLAVIAVLMNFDKIPSVVHMILQSAFDFKAIFGG
                     FAGSALVIGIKRGLFSNEAGMGSAPNAAAAALTSHPAKQGVIQAFSVLIDVVVCTSSG
                     FLVLFSMAYLGLGESKIDGGMPLVQEAMREYYGSFGIHFITIAIVLFAITSLIGNYYY
                     AQANVKYLTNSKFVMNLFRITAVAMIFIGSQMNLKLAWNLADLTMAFMATTNIISLLL
                     LGGIVNKVLKDFNTQQKSGIDPKFNASKLGIKNAECWD"
     gene            complement(4143..4871)
                     /locus_tag="RJ336_000704"
     CDS             complement(4143..4871)
                     /locus_tag="RJ336_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213167.1"
                     /translation="MIEVKNLQKKYGELEVLKDINTTISKGDVIAIIGPSGGGKSTFL
                     RCINRLELADSGEILINKQNILDKEIDINKIRQKVSMVFQHFNLFANKNVMENLCLTP
                     IKTGILSQEEAIKKAKLLLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILF
                     DEPTSALDPEMIGEVLSIMKDVAKEGLTMLVVTHEMGFARNVANRIFFMDKGKIAVDA
                     SPKEVFENPSNERLREFLNKVLNH"
     gene            complement(4864..5607)
                     /locus_tag="RJ336_000705"
     CDS             complement(4864..5607)
                     /locus_tag="RJ336_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDZ5213168.1"
                     /translation="MNQKNIRIFVFFVIIILWGYFSFPIEILKIQDPSGIVSYGYTEN
                     AKAYLKSYLITLLLTACAVIIGVIIGFSLAILHFSKFKTLNFIIDEYIDIIRGTPVIL
                     QLMIFAFVIFTFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQIEAARAMGLDYK
                     TSMKEIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPI
                     IFTGLVYYVSVKIFSYFAKKLELRMNKND"
     gene            5690..5869
                     /locus_tag="RJ336_000706"
     CDS             5690..5869
                     /locus_tag="RJ336_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213169.1"
                     /translation="MLEFPKNKVVFMEILDFILIVIFVFLMIVLVIGFNHQMMQKNKE
                     REERFKKYKKGEQNE"
     gene            5862..6431
                     /locus_tag="RJ336_000707"
     CDS             5862..6431
                     /locus_tag="RJ336_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HDZ5213170.1"
                     /translation="MSKKVLIPLAQGFEEAEFIGIADVLKRAKELNPDLEVVIASLNS
                     ELLVKGANSISIKADCSIEDVDIENLDAIALAGGFEGMMNLKNSNVILNIIKQLHSKN
                     KIVAAICASPIVLNEAGVLEGEFACYPSCEVGLNGNRVNKAVVVNKNVITSAGPATAI
                     LFGLELAKKLCGDEIYQKLYEGMLLPLIK"
     gene            complement(6461..6826)
                     /locus_tag="RJ336_000708"
     CDS             complement(6461..6826)
                     /locus_tag="RJ336_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HDZ5213171.1"
                     /translation="MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIP
                     KKHFKDFQEFDPELMAKMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEVFHLHFHML
                     GGFELPKEKTKKENPQALF"
     gene            6949..7941
                     /gene="pheS"
                     /locus_tag="RJ336_000709"
     CDS             6949..7941
                     /gene="pheS"
                     /locus_tag="RJ336_000709"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDZ5213172.1"
                     /translation="MQNFIEQIQKCENLNDLEAIRISVLGKKGILTEGFTKLKELEDG
                     AKKEFAAKLNAQKEIFNEAYLAKFKDLENLALEERMKQDALNFNYFDESITTGALHPV
                     MSTMDKIIEYFIALNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFDDKRLLR
                     TQTSPVQIRTMLAQKPPIRMIAPGAVFRRDFDITHTPMFHQVEGLVVEEGQKVSFANL
                     KSVLEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGKGCRVCKHTGWLEVLG
                     CGIVDPNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDLRLLEQFR"
     gene            7938..10259
                     /locus_tag="RJ336_000710"
     CDS             7938..10259
                     /locus_tag="RJ336_000710"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDZ5213173.1"
                     /translation="MIITRSWLNDWLELEEISSDKIAKTLNSIGIEVDRVSALKAPDK
                     VVVGYVKEKIKHENSDKLSICQVDIGSETLQIVCGAANVDAGQFVAVATKGAIMPNGM
                     EIKEAKLRGVDSCGMLCSSLELGFEKTNEGIMLLDESIGKLELGRALNTYEIFNDELI
                     EVELTPNRGDCLSIYGIARDLATALNLNLKEPKPFKEGENVLGIGRILRLAAEKELNG
                     LYNYRAIELKGQFQINLLLSLRLAQIESLGKNSIENLLSYATHSTGVLFNAYDLNSLS
                     GEDEEFTINLTKQAHGETKVSCKDKFLSFSGIFQNDESKCKNDSKIVIIEANYTDPLV
                     IANAKMYHKDQDEKTLYRSFRGSEPKLNLGMDFLLSIFEQIPNLVIYSSSQQILTDKE
                     LPIIPISIESIGDIIGQNVDKDEVLKILKKLGFELILSGEGLINVKAPLHRPDIKNLS
                     DICEEVVRIIGIDNIASKGLEFIEKNRLNSAYKNYIEFLNLRKRAVASGYFESLHYVL
                     DNEEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELG
                     AVFNVNNQELNRIAFIHSGLKEEAKISNKAKPESVQFYDFLLDIKNIIGDFKLKSSKY
                     NILSPYEQADIYLSDIKVGFIGRLHLKIENERDLPKTYICELDLDLIRQDFKIAKPYS
                     KFPAITRDLSVLIPKGFEYNQIKNCIEELNLEILENFRLVDIYSDENLKEFYSITISF
                     SFRDINKTLEDNQVNECMDKILNTLKNLGLDLR"
     gene            10256..11542
                     /gene="aroA"
                     /locus_tag="RJ336_000711"
     CDS             10256..11542
                     /gene="aroA"
                     /locus_tag="RJ336_000711"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDZ5213174.1"
                     /translation="MKIYKLQTPVNAILENIAADKSISHRFAIFSLLTQEENKAQNYL
                     LAQDTLNTLEIIKNLGAKIEQKDSCVKIIPPKEILSPNCILDCGNSGTAMRLMIGFLA
                     GISGFFVLSGDKYLNNRPMRRISKPLTQIGARIYGRNEANLAPLCIEGQNLKAFNYKS
                     EISSAQVKTAMILSAFRANNVCAFSEISLSRNHSENMLKAMKAPIRVSNDGLSLEISP
                     LKKPLKAQNIIIPNDPSSAFYFALAAIILPKSQIILKNILLNPTRIEAYKILQKMGAK
                     LEMTITQNDFETIGEIRVESSKLNGIEVKDNIAWLIDEAPALAIAFALAKGKSSLINA
                     KELRVKESDRIAVMVENLKLCGVEARELDDGFEIEGGCELKSSKIKSYGDHRIAMSFA
                     ILGLLCGIEIDDSDCIKTSFPNFIEILSNLGARIDY"
     gene            11532..12365
                     /locus_tag="RJ336_000712"
     CDS             11532..12365
                     /locus_tag="RJ336_000712"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDZ5213175.1"
                     /translation="MIIELAKNYGFCFGVKRAIKKAEQIKDAATIGPLIHNNEEISRL
                     QKNFNVKTLENIQALSNEKKAIIRTHGITKQDLEELRKKDIEIFDATCPFVTKPQQIC
                     EQMSKEGYEVVIFGDENHPEVKGVKSYVSTKAYVVLDKKELQNIKLPNKIAVVSQTTK
                     KPEHFMEIVNFLILKTKEVRVFNTICDATFKNQDAIKELSLKSDVMVVVGGKNSANTK
                     QLFLIAKTNCEDSYLIETEEELKKEWFLDKKHCGISAGASTPDWIIQKVIAKIENFKI
                     N"
     gene            12497..14167
                     /locus_tag="RJ336_000713"
     CDS             12497..14167
                     /locus_tag="RJ336_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDZ5213176.1"
                     /translation="MSEVNKKVQGGVDDYLEEEDFGQLLEAFDKSREEATTEGVIVEI
                     KNDEVYVDIGKKSEGILALSEIQDDNSKLLFNVGDSIKVAVMGSRGGRSLLSHKKALR
                     KEKVIEFIKNYQENQDDIFTVKVVGKNKGGLIVVDENDVEFFLPKSQYGFKETNNIIG
                     KTFKVKIIKIDKDEQSIIVSRKKTLDDERRKRKELINNVAQQEDLIEGIVKKITTYGM
                     FVDVGGVDGLVHYSEISYKGPVNPGTLYKEGDKVPVKVIKYDKERKHLSLSIKAALPD
                     PWSEIKDTLDVGDTIKVIVSNIEPYGAFVDLGNDIEGFLHISEISWDKNIKNPKDYIN
                     KGQEIDVEVIEINPNERRLRVSLRNLLSRPFDEFMKSYKIADVVEGEITSVTSFGAFV
                     KLGGIEGLLHNEDASWDRNDKCKDKFSQGDKIKVKIIKIDEENQKISLSTKELSSSPV
                     QEYAKIHKVGDIVKGAIRDIKDFGVFVELSKNVDALIHKEDISTSMLENLKIGDDIEA
                     AIVFIDEKKNRIRLSVKNLVRMKEREVLNEINNDDKVTLGDIIKDQLA"
     gene            14167..14655
                     /locus_tag="RJ336_000714"
     CDS             14167..14655
                     /locus_tag="RJ336_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213177.1"
                     /translation="MKKYITISILSILLLILLAVVFTLLWQFKANVNFIPQFAKDTNT
                     QPSIQTQNQDLSWQEELAKWPTRDFTPAAEKFTLYFDADTSELKEKNKYYQLIVGKYD
                     IYSMFCLRQTLNSFNVKYFLLKSGDSPEIFLDTGNEKLIDDIIKELKKYKINTEVKEI
                     WL"
     gene            14652..16235
                     /locus_tag="RJ336_000715"
     CDS             14652..16235
                     /locus_tag="RJ336_000715"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDZ5213178.1"
                     /translation="MKKKIIVCDAILDKGVDILRKAEDIELIEAAKVPKDELMQMLSD
                     VEVAITRSSTDVDINFLNHAKKLKALVRAGVGVDNVDIPECSKRGVIVMNVPTANTIA
                     AVELTMAHLLTSARSFVNAHNFLKIERKWEREKWYGIELMNKTLGVIGFGNIGSRVAI
                     RAKAFGMKILAYDPYISASKITDLDMEQAKNLDEILEKSDFITIHTPKTKETNGMIGK
                     QEIAKMKDGIRLINCARGGLYTEEALYEGLKSGKIAWLGIDVFDKEPATNHPLLDFEN
                     ISVTSHLGANTLESQDNIAREACEQALSAARGVAYPNALNLPIKTEDLPPFVAPYIEL
                     VSKMAFLAVQIDKNPIKSIKLEAEGIIGEYANSMLTFAAVGALGGILGEKINYVNAEF
                     VAKEKGVELSCETLPNSGYNNKLSVKIITENSNISVSGTVFNENEQRIVGLNGFKTDF
                     KPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDGFGYALAVVLIDEKVQKE
                     VLDELKQLEACVFVQYVEI"
     gene            16222..16884
                     /locus_tag="RJ336_000716"
     CDS             16222..16884
                     /locus_tag="RJ336_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDZ5213179.1"
                     /translation="MLKFKILIIEDDIDLNELLVLKLKSSGYEVISLVDFFGVEDLLD
                     NEQIDLLIVDRNLPSGDSLEKIQDLREQGYKEAVIFLTAKALHQDLLEGFESGCDDYV
                     CKPFDFNELLLRIKAILKRHKKEEEKLSFGDFILDLANYEFFYKNQKLEISNLDYELL
                     KCFFENPNTLLTRQFLSESVWKDDTTSDKTINIALTRLRNKFPKLKDHIISVRGVGYK
                     LC"
     gene            16878..18167
                     /locus_tag="RJ336_000717"
     CDS             16878..18167
                     /locus_tag="RJ336_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDZ5213180.1"
                     /translation="MLKTKNIFIVFFVVLALIFGFIFYTFTNSYLNFLLIKQYEQKIK
                     SLDDVLKFSLLEHLNDANIKDFAKDTRADFIILNNDMKISSVKNPDFFSNLKEGEILN
                     FNSKKILTKSFIYKGYKYIIIVYPRFLDLELFWTKIAIGFGVCLLFVFILMLLLGRRI
                     EKNFNKILDFLDSIGDHKVVILEKGMFKEFNLLNEKLLKTKDKILKNTQKNKKQSDKI
                     TLKNTQLASVISAISHELKNPLSVIDLSLEMLKDEKLEDKKLKKELLEKISRQSIKLN
                     ALTHKLNFVFNLNSEALQMQEFDLFFLCEKITKNPGFERVVLQGKSTKVKADEFLIEQ
                     VIINLLSNALKYSQKEVILTARDQKIIVQDFGKGIEEDKIKLITKKFYKIDAKSDNSF
                     GLGLFLVKKILNIHKSYLEISSTLGYGSSFSFKLSQG"
     gene            18171..20102
                     /locus_tag="RJ336_000718"
     CDS             18171..20102
                     /locus_tag="RJ336_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDZ5213181.1"
                     /translation="MALIDLIEASKKFGDKIVLNEANFSANEGEKIAIIGKNGEGKST
                     FLKTLLGTLPLDSGRVIRQNGKSIAMLSQSVDFNANLSVKEAIKQELAEIYNALEEYE
                     ILHKKLEEDPSNKDYLKKIDTLMTLIDSKDAWNIESKIIRVLKEFSLLEYENRIISTL
                     SGGEIRRVGLCILLLKNPDILLLDEPTNHLDVYMTSFLEELLKNSKMCVIFISHDRYF
                     IDAIAHKCVEVEQGKLSIFKGGYANYLEKKTQILQSLAKSHETLLKQLKSEEEWLRRG
                     VKARLKRNEGRKERIFKMREEAKKNPGAIKRLKLEISRAALNFNGEKTINRKKMLFEL
                     KNISKNINNKNLFKDFSTRILQGERIAIVGRNGCGKSTLLKILLGQIKQDCGEIKRGE
                     LKIGYFDQARSLVNSDKSLLEIFCPNGGDRVEVRGKNMHVYGYLKNFLFPKEFLDKSV
                     ALLSGGEKNRVALALLFTKEYDVLILDEPTNDLDIATINILEEYLLSFEGAILLVSHD
                     RYFVDKIATKLYAFEGDGYINILHTLYTEYLENEKEIEELDNFALELQTQEQNNNQKE
                     KSSKKLSYKENEILKNHPEKIDFLEQKIAKLNQDLSDPNVYQEIGINKLYQELEVMQK
                     ELEILENEYFLVLEKSENL"
     gene            complement(20132..20206)
                     /locus_tag="RJ336_000719"
     tRNA            complement(20132..20206)
                     /locus_tag="RJ336_000719"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(20172..20174),aa:Gly,seq:gcc)
     gene            complement(20217..20303)
                     /locus_tag="RJ336_000720"
     tRNA            complement(20217..20303)
                     /locus_tag="RJ336_000720"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(20267..20269),aa:Leu,seq:caa)
     gene            20484..22733
                     /gene="flgL"
                     /locus_tag="RJ336_000721"
     CDS             20484..22733
                     /gene="flgL"
                     /locus_tag="RJ336_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HDZ5213182.1"
                     /translation="MRITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDAS
                     TYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSN
                     SQTSREAIAKELERIKESIVQLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINV
                     VTGAGTESPYNIPGWDLFFKADGDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKW
                     QQLIGQGYVKDNGLDPDKDFEYDDKLDFPPTTLYVQGTKPDGTSFKSAVLVKPEDTLE
                     DVMENIGALYGNTPNNKVVEVSMNDSGQIQITDLKQGNNKLDFHAVAFTPQADDRAEL
                     TGIIDAAKQEGISMDEVTNRVMQAATAAPSNGDITKLNSPVTVTINNQQFTIDLKQTD
                     FIKSKMTDTDGNATNGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVMAG
                     DSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPITHTDPATGNSG
                     VVTGSNDITYGQINDIIGMFAADKIPTQSITATNGKVDANGYNNLQQLMKDSQATVDV
                     SMDYKGRISVTDKLSSGTNIEISLSDSQSGHFPQPPFSTTSSVTNGPNFSFSANNSLV
                     IDEPNVDIIKDLDSMIDAVLKGNMRADSESEDPRNTGMQGALERLDHLADHISKLNTT
                     MGAYHNTIEDVNTRSTFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTI
                     SQLSLLNYM"
BASE COUNT         8406 a         2841 c         4033 g         7652 t
ORIGIN      
        1 atcataaata aggccgcatt gttaatataa ttaatatttt ttaagaaaaa aaatattata
       61 atcacaaaca tttttgactt aaaaaatttt gaaataccta aggaaaaaca ttgttaaaac
      121 gacttgcttt attaattaca ctttcttcat tgatgttaca tgcctcagat cttgttaaaa
      181 tttatcttaa tcaagggtta gatgctgttg gtgtagcgat tgaaaaagaa ttaactcaaa
      241 aggatttttg gttaagtgaa ataggagata aaaatatttc acttggatat tatgatgata
      301 atgttgctat cgtgcttaca aataaaacag ataaaattct ccgtgtttat tcttatgagg
      361 acggaaaaat aagaaaagat tttgaacaaa aagaaataat aactggatta atgggcgata
      421 aaaaaataga aggagatttg aaaacgccag taggttttta tgagttaggc cgtaagttta
      481 atccaggtga tccttattat ggtccctttg cttttgccac aacttatcca aatttacttg
      541 ataaagtaca aggaaaaaca ggtggtggta tttggatcca tggctatcct ttagatggtt
      601 ctagacttga tgaatttaaa acaagagggt gtattgcttt atttaataat aatttagaga
      661 aatttgcaca agttgtacaa gataaaaaag tttttgttat gacagaagaa aaagaaaaaa
      721 ttagagctaa aaaggatcaa atagctagtt tattggctga tctttttaca tggaaactag
      781 cttggacaaa tagtgacact aatacctatt taagttttta tgatgagcaa gaatttaaac
      841 gttttgataa aatgaaattt gaacagtttg cttccatgaa aaaatctatt ttttctcgta
      901 aagaagataa aaagattaaa ttttcagata ttaatatcag cccttatccg aatttagaaa
      961 atgaaactat gtatagaatt tcattttatg aggattatta cactaaaaac tatcagttta
     1021 gaggcgataa aattttatac gttaagatag atagtaaagg taaaatgaaa attttagcag
     1081 agcaataaat gtctttaata aaaattgatc aaaaagctta tgaatataat ttaagacata
     1141 ttgctaaaaa aatagggagt tttcaaagat taatttgcgt ttttaaagat aatgcatatg
     1201 gacatggagc taagctttta gctccattag ccaaaaattt aggagtttct tttgttgctg
     1261 ttaagagtga agaagaagct caagaaatcg aagaattttt tgagaatata ttaatactat
     1321 cacatcgtcc tcatggtaat gaaaattctc gatttattta tgctttaaat gatatttccc
     1381 aagtaaaaaa atacaagcaa gatataaaaa tacatctaaa aatagataca ggcatgcatc
     1441 gcaatggaat ttgtgtagaa aatttagaac atgctataga tcttattcga agtagtgatt
     1501 taaaacttac tggaatgttt acacattttg ctagtgcaga tgaaatggat ggaagttttt
     1561 ttgttcaaaa agaaaatttt caaaaagcta aaaagatagt aaaaaaatat ttttcaaatt
     1621 tattatttca ttcgcataat tctgcagcat tatttagagg gaaaattccc gaagatgaat
     1681 attgtagagt tgggcttgtt caatttggat atggggattc aaatttaaaa agagttttaa
     1741 gcttgtatgc tcatagatta agtcaaagga ttttgcaaaa aggacagagt ataggatatg
     1801 gaggcatttt tactgctgca aaggatatgg aagtagcaac ttatgatttg ggttatgctg
     1861 atggtctttt ccgttacaat ggaaaagggg agttggtgct tggaaatgga aaagtaatgc
     1921 ttggaaagat gtcaatggat agtttttctt gtgaaaattc tggtgaggaa atttgcgtgt
     1981 ttaaagatgc tgatatttgg gctgattttt ttcatactat taactatgaa attttagtaa
     2041 aattaaatcc taacattcaa agagttctgg tataaatatg tttaatatag ttttagttca
     2101 ccctagaata ccgcaaaata caggtagtat aggtagaatg tgttttaatg ctggttttaa
     2161 acttcatatc attaaaccaa ctgtttttga tatttctcaa aaggctgtta gaagggcagg
     2221 gcttgattac tgggataaat tagaacccat tatttgggag aatcttgaag aatttttgaa
     2281 tgaaaatatg atttataaaa atcgcttttt tttcgcaaca accaagagtc aaaaagctta
     2341 ttttgatgca gaatttcaga aaaatgattt cttattcttt ggaagtgaga gttatggctt
     2401 acctatggaa ttaatgcaat taaattggga aaatgctata actataccta tgaaatctta
     2461 tggaagaagt ttaaatttag ctacaagcgt tggtataatc tcttatgaag ctttaagaca
     2521 aaattttagc aattttgttt cttaaaagtt tcaaatttac acaacaactt aaaacaaata
     2581 aaatcataaa gtccttttta taaaaattat gttaaagtaa aatttagatt attttttgag
     2641 gagtttggat gaatttagat attatgctag attttgccaa taaagcgtct gatattatag
     2701 ctaataagat tgtcccaaat acagacatta ttatggtggt tttgcttatt gtttgtggac
     2761 tttattatag ctttttaact cgctttgttc agtttcgtat gttgagttct gtatttaaaa
     2821 ttcttacaga aaaaaatgaa ggacacacta aagaacatat ttcacctttt caggcattga
     2881 tgatctcaac tgcttctaga gttggtatag gaaatatcgc tggaatttct ttggcattgg
     2941 ctacaggtgg cgctggtgct ttattttgga tgtgggttat ggcatttttt ggtggtgcct
     3001 cagcatttgc tgaaagtacc ttagctcaag tttataaatc aaaagatgat acaggtgggt
     3061 ttaaaggtgg tccagcttat tatataaaaa aagccttagg ctcacatttt tttggagctt
     3121 tttttgcttt tattcttatt attacttatg cttatggatt taacggactt caaagtcaaa
     3181 caatgacttc atcttttaaa gtttattatg atatgtttaa tccaaatgct gctgtagatt
     3241 ttgcatcaag ttcttggcca atgatcattg gtattgtttt aactattttt ggcgcatgga
     3301 tgtttttttc tcaccatact aaaataggta aaattagttc tttaattgtt ccttttatgg
     3361 ctttagctta tgttttgctt gctgtgattg ctgttttaat gaattttgat aaaattcctt
     3421 ctgtggttca tatgatttta caaagtgctt ttgattttaa agctattttt ggtggttttg
     3481 ctggttctgc tttagttata gggattaaaa gaggactttt ttcaaatgaa gcgggtatgg
     3541 gctcagcacc taatgcagct gcagcagctt tgacaagtca tccagctaaa caaggtgtta
     3601 tacaagcctt ttcagtttta attgatgttg ttgtttgtac aagttctgga tttttagttc
     3661 ttttttctat ggcatatttg ggacttggag aaagtaaaat tgatggtgga atgcctttag
     3721 ttcaagaagc tatgcgtgag tattacggta gctttggaat ccattttatt actatagcta
     3781 ttgttctttt tgcaataact tctttaatag gaaattatta ttatgctcaa gctaatgtta
     3841 aatatttaac aaattccaaa tttgtaatga atttgtttag aattacagct gtggctatga
     3901 tttttatagg ctcgcaaatg aatttaaaac ttgcttggaa tttggctgat ttgactatgg
     3961 ctttcatggc aacgacaaat attatatctt tattgctttt aggtggtata gtaaataaag
     4021 ttttaaaaga ttttaatacg caacaaaaat ctggtataga tcctaaattt aatgctagca
     4081 aacttggaat taaaaacgct gaatgttggg attaaaattc ataagcctta gtggcttatg
     4141 aattaatgat ttaaaacctt gtttaaaaat tctctcaatc tttcattgct aggattttca
     4201 aatacttctt tagggcttgc atcaacagca atttttcctt tatccataaa aaatatacga
     4261 ttggcaacat ttctagcaaa gcccatttca tgagttacta caagcatagt taaaccttct
     4321 tttgcaacat ctttcataat gcttagaacc tcgcctatca tttcaggatc tagagctgaa
     4381 gtaggttcat caaataaaat aacatcagga ttcatcatca agcttctagc aatagctatg
     4441 cgttgttttt gtccgccaga gagcttatga ggcattatat tttctttgtc tgctaaaccc
     4501 accttagcaa gaagtaattt tgcttttttt atggcttctt cttgacttaa aattcctgtt
     4561 ttaatgggcg ttaaacataa attttccata acatttttat tagcaaaaag attaaaatgc
     4621 tgaaatacca tgctaacttt ttgcctgatc ttattaatat caatttcttt atcaagtatg
     4681 ttttgcttat tgattaaaat ttccccacta tcagctagtt ctaagcgatt gatacagcgt
     4741 aaaaatgtac tttttccgcc tccacttgga cctatgatag ctattacatc gccttttgag
     4801 attgtagtgt taatatcttt taaaacttct aattctccat attttttttg taaattttta
     4861 acttcaatca tttttattca tcctaagttc aagttttttt gcaaaatagc taaaaatttt
     4921 tacgcttaca taataaacaa gtccagtgaa aataataggt tttggattgt aaagtacggc
     4981 ttgcaggctt tgactttgca tggtaatatc aataacacta ataaatccta caacagaagt
     5041 ttccttaaat aaagaaataa attcattagc taatgcaggt agaatgtttt tagtagcctg
     5101 tggaagaata atttctttca ttgaagtttt gtaatcaagt cccattgctc ttgcagcttc
     5161 tatttgtccc ttatctacac tattaatgcc acttcttaca atttctgcta tataagccga
     5221 gctattaagt cctagtgcaa gaatggctgc ataaaggtta tctataaaag taaaaattac
     5281 aaaagcaaaa atcatcaatt gtaaaattac tggtgttcct cgtataatgt ctatatattc
     5341 atctataata aaattaagcg ttttaaattt agagaagtgt aaaatagcta aactaaaacc
     5401 aataatcact ccgataataa cagcacaagc agttaataaa agtgtaataa gataactttt
     5461 taaataagct tttgcatttt ctgtatagcc atagcttaca attccactag gatcttgaat
     5521 ttttaatatt tctattggga aagaaaaata gccccataaa ataataataa caaaaaaaac
     5581 aaaaattctt atatttttct gattcaattt gtaaaccttt tcagagaaat tatttaaaaa
     5641 aagattttat agaaatatct ttgaattttc tctaaagatt taaaaaaatg tgttagaatt
     5701 tcccaaaaat aaggttgtat ttatggaaat tttagatttc attctaatag ttatttttgt
     5761 gtttttaatg attgttttgg tcataggttt caatcatcaa atgatgcaaa aaaacaaaga
     5821 aagagaagaa agatttaaaa aatataaaaa aggagaacaa aatgagtaaa aaagtattaa
     5881 ttccattggc tcaaggtttt gaagaagctg aatttatagg aattgcggat gttttaaaac
     5941 gagcaaaaga attaaatcca gatttggaag ttgttatagc ttcgttaaac agtgagttat
     6001 tggtaaaagg tgctaatagc attagtataa aagcagattg ttctatagag gatgttgata
     6061 tagaaaattt agatgctatt gctttggcgg gtggctttga aggtatgatg aatcttaaga
     6121 attcaaatgt tattttaaat atcattaaac aacttcacag caaaaataaa attgttgccg
     6181 caatctgtgc ttctcctata gtcttaaatg aagcaggtgt tttagagggc gagtttgctt
     6241 gctatcctag ttgtgaagtt ggacttaatg gaaatcgtgt taacaaggct gtagttgtaa
     6301 ataaaaatgt tataacttca gcaggtccag ctacggcaat tctttttggt ttagaactag
     6361 ctaaaaagtt atgcggtgat gaaatttatc aaaaattata cgagggaatg ttgctacctc
     6421 tgataaaata atttaaatgg tagtttttct accatttaaa ttaaaataaa gcttgaggat
     6481 tttctttttt tgttttttcc ttaggcagtt caaaacctcc aagcatatga aaatgcaaat
     6541 gaaaaacttc ttgtccgcta ttttttccac agtttgttac taagcgatat ccacttttat
     6601 ctacgcctaa aagaacagct aattcttgta taaaacttgt cattttggcc ataagttcag
     6661 gatcaaattc ttgaaagtct ttaaaatgtt ttttagggat tataagtata tgtataggtg
     6721 ctttgggtgc aatatcatga aatgctagaa aatcgtcact ttcaagcact ttattgcatg
     6781 gaagtttacc ttcaactatg agttcaaaaa ttgttttttc ttgcattatt tatccttttt
     6841 tattgttggt ttgatacaat tatatcttta aagtttggtt tttatgctga atttaaaata
     6901 gtttttaata gaattagaac ttgaaatatt ttatttaagg taagaaaatt gcaaaatttt
     6961 atagaacaga ttcaaaaatg tgagaattta aatgatttgg aagccattag gatttccgtt
     7021 ctcggaaaaa aaggtatttt aacagaaggc tttacaaagc ttaaagagtt agaagatggt
     7081 gcaaaaaaag aatttgctgc taaactaaat gcacaaaaag aaatatttaa tgaggcttat
     7141 ttagccaaat ttaaagattt ggaaaatctt gctttagaag aaagaatgaa acaagatgct
     7201 ttaaatttta actattttga tgaaagtatt acaacaggtg ccttgcatcc tgttatgagt
     7261 accatggata aaatcataga gtattttata gctttgaatt ttagcataga aaaagggcct
     7321 ttaatagaag atgacttcca taattttgaa gcgttaaatt tacctaaatc tcaccctgca
     7381 agagatatgc aagatacctt ttattttgat gataaaaggc ttttaagaac acaaacttca
     7441 ccagtgcaaa tacggacaat gcttgcacaa aaacctccta ttaggatgat agcccctggt
     7501 gctgtattta gaagggattt tgatattacg catactccta tgtttcatca agttgaaggc
     7561 cttgttgtgg aagaggggca aaaggttagc tttgcaaatt taaaaagtgt attggaagat
     7621 tttttgcgct atatgtttgg agatgtgaaa gttcgttttc gtccaagttt tttcccattt
     7681 acagaacctt ctgctgaagt tgatatttct tgtgtatttt gcaaaggaaa gggttgtagg
     7741 gtttgtaaac atacaggttg gcttgaagtt ttaggatgtg gaatagttga tcctaatgtt
     7801 tataattttg ttggctatga aaatgtaagt ggttatgctt ttggattggg agtagagcgt
     7861 tttgcaatgc ttttacatca aattccagat ttaagatctt tatttgaagg tgatttgaga
     7921 ttattggagc agtttagatg ataattacta gaagttggtt gaatgattgg ttggaactcg
     7981 aagaaataag ttcagataaa atagctaaaa ctttaaactc cataggcata gaagttgata
     8041 gggttagtgc tttaaaggct ccagataaag ttgttgtagg ctatgttaag gaaaaaatta
     8101 aacatgaaaa ttcagataaa ttaagcattt gtcaagttga tatcggaagt gaaaccttgc
     8161 aaattgtctg cggtgctgcg aatgttgatg caggacaatt tgtagctgtt gcaactaaag
     8221 gcgctatcat gccaaatggt atggaaataa aagaagcaaa attacgagga gtggattctt
     8281 gtggtatgct ttgttctagt ttagaacttg gttttgaaaa aaccaatgaa gggattatgc
     8341 ttttagatga gagtataggg aaattagaac ttgggagagc tttaaatact tatgaaattt
     8401 ttaacgatga gctaatagaa gtagaactta ctcctaatag gggtgattgt ttaagtattt
     8461 atggtattgc tcgtgattta gctacagctt taaatttaaa tttaaaagaa ccaaaaccat
     8521 ttaaagaagg tgaaaatgtt ttaggtattg gtagaatctt gcgtttagcg gctgagaagg
     8581 agcttaatgg gctttataat tatcgcgcca tagaactaaa aggtcaattt caaataaatt
     8641 tattgcttag tttaagactt gcgcaaattg agagtttggg aaaaaattct atagaaaatt
     8701 tattaagtta tgcaacacat tcaactggtg ttctttttaa tgcttatgat ttaaatagtc
     8761 tttctgggga agatgaagaa tttaccatta atttaactaa gcaagcacat ggagaaacaa
     8821 aagtatcttg taaagataag tttttgagtt ttagtggaat ttttcaaaat gatgaaagca
     8881 aatgtaaaaa tgattctaaa atagttatta ttgaggctaa ttatactgat ccattagtaa
     8941 ttgcaaatgc taaaatgtat cataaagatc aggatgaaaa aacactttat agaagcttta
     9001 ggggaagtga acctaaatta aatttaggaa tggatttttt gcttagtatt tttgagcaga
     9061 ttccaaatct tgttatttat agttcttctc aacaaatttt aaccgacaaa gaattaccaa
     9121 tcataccaat aagcattgaa agtattggcg atataatagg gcaaaatgtt gataaagatg
     9181 aagtattaaa aatattgaaa aaattaggtt ttgaactcat actttcaggt gaagggctta
     9241 taaatgttaa agcaccttta catcgtcctg atattaaaaa tttatcagat atttgcgagg
     9301 aagttgtaag aattataggt attgataata ttgcttctaa gggtttagaa tttatagaaa
     9361 aaaatcgttt aaattctgca tataaaaatt atattgagtt tttgaattta aggaaaagag
     9421 cagtagctag tggttatttt gaaagcttac attatgtttt agataatgaa gaagaactta
     9481 aaagattggg ttttgactct gttaaattaa aactaattaa tccaattaca gcagaactta
     9541 atactttaag aacaaccctt ttaaatcatt tgttaaatgc agcaagttta aatgcaaaaa
     9601 attctaaaaa aattattaaa ctttttgaac taggggctgt tttcaatgtt aataatcaag
     9661 aattaaatcg tatcgcattt atccattctg gcttaaaaga agaagctaaa atttccaaca
     9721 aggccaaacc tgaatcggtg caattttatg attttctttt agacattaaa aatattatag
     9781 gtgattttaa actaaaatca tcaaaatata atattttaag cccttatgaa caagcagata
     9841 tttacctatc ggatattaaa gtaggtttta taggccgttt gcatttaaaa atagaaaatg
     9901 agagagattt accaaaaaca tatatttgcg aacttgattt agatttaatc aggcaagatt
     9961 ttaaaatagc taagccttac tccaaattcc cagctatcac tagagatctt agcgtgttaa
    10021 tacctaaagg ttttgaatac aatcagatta aaaattgtat cgaagaattg aatttagaaa
    10081 tacttgaaaa ttttcgttta gttgatattt atagtgatga aaaccttaaa gaattttata
    10141 gcattactat aagtttttct tttagggata taaataaaac tctagaggat aatcaagtca
    10201 atgaatgtat ggataaaatt ttaaatactc ttaaaaattt gggtcttgat ttaagatgaa
    10261 aatttacaaa ttgcaaaccc ctgtaaatgc tatacttgaa aatatagcag cagataaaag
    10321 catatctcat cgttttgcta tattttcgct tttaacacaa gaagaaaata aggctcaaaa
    10381 ttatctctta gctcaagata ctttaaacac tcttgaaatt ataaaaaatc ttggagctaa
    10441 aattgaacaa aaagattctt gcgtcaaaat tataccccct aaagaaattt tatctccaaa
    10501 ttgtatttta gactgtggaa attcaggaac tgctatgcgt ttgatgatag gatttttagc
    10561 aggaatttct ggtttttttg ttttaagtgg agataagtat ttaaacaatc gtcctatgag
    10621 aagaataagc aaaccactta ctcaaatagg cgctagaatt tatggaagaa atgaggcaaa
    10681 tttagctcca ctttgtatag aaggtcaaaa tttaaaagct tttaactata aaagcgaaat
    10741 ttcttcggct caagttaaaa cagctatgat tttatctgct tttagagcta ataatgtatg
    10801 cgcttttagt gaaatttctc ttagtcgaaa tcatagcgaa aacatgttaa aggctatgaa
    10861 agctccaata agggttagca atgatggctt aagtcttgaa ataagtcctt taaaaaaacc
    10921 tttaaaagct caaaatataa tcattcctaa tgacccttct tcggcttttt attttgcttt
    10981 agcagctatt attttgccta aatctcaaat tattttaaaa aatattttac ttaatcctac
    11041 tcgtatagag gcgtataaaa ttttgcaaaa aatgggtgcc aaacttgaaa tgacaataac
    11101 tcaaaatgat tttgaaacta ttggtgagat cagggtggag tctagcaagc ttaatggcat
    11161 agaagttaaa gataatattg cttggttgat agatgaagcg cctgctttgg ctatagcttt
    11221 tgctttggct aagggtaaat ctagtttaat aaatgctaaa gaattacgcg ttaaagaaag
    11281 cgataggatt gctgtgatgg ttgaaaatct aaagctttgt ggtgttgaag ctagagaact
    11341 tgatgatggt tttgaaatag aaggtggatg cgaactaaaa tcttcaaaaa ttaaaagcta
    11401 tggagatcac cgtattgcta tgagttttgc tattttaggt ttgctttgtg gaattgagat
    11461 tgatgatagt gattgtataa aaacttcttt tccaaatttt atagagattt tatcaaattt
    11521 aggagctagg attgattatt gaattagcaa aaaactatgg tttttgtttt ggtgttaaaa
    11581 gagctattaa aaaagcagaa caaataaaag atgctgcaac tataggccct cttattcata
    11641 ataacgaaga aatttctcgt ttacaaaaaa attttaatgt caaaactttg gaaaatatac
    11701 aagctttaag caatgaaaaa aaggctatta taagaactca tggtattaca aagcaagatt
    11761 tagaagaatt gagaaaaaaa gatatagaaa tttttgatgc cacttgtcct tttgttacaa
    11821 aaccacaaca aatttgcgag caaatgagca aggagggtta tgaagttgtt atttttggag
    11881 atgaaaatca tcccgaagtt aaaggagtaa aaagttatgt aagtacaaaa gcttatgtgg
    11941 ttttggataa aaaagaactt caaaatataa aacttcctaa taaaatagct gtggtaagcc
    12001 aaacaactaa gaagcctgag cattttatgg agatagtaaa ttttttaata cttaaaacca
    12061 aagaagtaag ggtttttaat actatatgtg acgcaacctt taaaaatcaa gatgccatta
    12121 aagaactctc gcttaaaagt gatgttatgg ttgttgtagg gggtaaaaac tcagccaata
    12181 caaaacaact ttttttgatt gcaaaaacca attgtgaaga tagctatcta attgaaaccg
    12241 aagaagagtt aaaaaaagaa tggtttttgg ataaaaaaca ttgtggcatt agtgcaggtg
    12301 ctagtactcc tgattggatc atacaaaaag ttatcgccaa aatagaaaat tttaagatta
    12361 attaaaaaat gttttcaaat agaataaaaa agtcaaaaat ttaaaaaaaa ttaacaaaaa
    12421 taaaaaaact taacactaat taaagaaaaa taaggtaaaa tcaatcaatt tctaaaaatt
    12481 attttaaagg accataatga gcgaggtgaa caaaaaagtt caaggcggcg tagatgatta
    12541 tcttgaggaa gaagattttg gacagctttt ggaggctttc gataaatcaa gagaagaggc
    12601 tacaacagag ggtgtgattg tagagatcaa aaatgatgaa gtttatgtag atataggtaa
    12661 aaaatctgaa ggtattttag ctcttagcga aatacaagat gataattcta agctattatt
    12721 taatgtaggc gatagtatta aagttgctgt tatgggttct cgtggtggca gatctttact
    12781 ttctcataaa aaagctttga gaaaagaaaa agttattgaa tttattaaaa actatcaaga
    12841 aaatcaagat gatattttta ccgtaaaagt agttggaaaa aataaaggcg gattgatagt
    12901 tgttgatgaa aatgatgttg aatttttctt accaaaatct caatatggct ttaaagaaac
    12961 aaataatatt ataggtaaaa catttaaagt taaaattatt aaaatcgaca aagatgagca
    13021 aagtattatt gtttctcgta aaaaaacttt agatgacgag agaagaaaac gcaaagaatt
    13081 gatcaataat gtagcacaac aagaagattt aattgaaggt attgtgaaaa aaattactac
    13141 ttatggtatg tttgtggatg taggaggtgt tgatggtctt gttcattaca gcgaaatttc
    13201 ttacaaagga cctgtaaatc ctggaacact ttataaagag ggtgataagg ttccagttaa
    13261 agttataaag tatgataaag aacgcaaaca tttatccttg tctataaaag cggctttacc
    13321 tgatccatgg agcgagataa aagatactct tgatgtaggt gataccatta aagtaatagt
    13381 atcaaatata gagccttatg gtgcttttgt ggatttagga aatgatatag aaggattttt
    13441 acatatcagt gaaatttctt gggataaaaa cattaaaaat ccaaaagatt atatcaacaa
    13501 aggtcaagaa attgatgttg aagtaattga aatcaatcca aatgaaagac gcttaagagt
    13561 ttctttaaga aatttacttt ctagaccttt tgatgaattt atgaaatctt ataaaattgc
    13621 agatgtggtt gaaggagaaa tcacctcagt aacttctttt ggtgcatttg ttaaacttgg
    13681 tggtattgaa ggtttattac ataatgaaga tgcttcttgg gatagaaacg ataaatgcaa
    13741 agacaaattc tctcaagggg ataaaatcaa ggtaaaaatt atcaaaatag atgaagaaaa
    13801 ccaaaaaata tcattaagta caaaagaatt aagcagttct ccagtgcaag aatatgctaa
    13861 aattcataaa gtcggcgata ttgtaaaagg cgctatccgc gatattaaag attttggtgt
    13921 ttttgtagaa ctaagtaaaa atgttgatgc tttaattcat aaagaagata taagcacttc
    13981 tatgcttgaa aatttaaaaa ttggcgacga tattgaagct gctatagttt ttattgatga
    14041 aaagaaaaat agaattcgcc taagtgttaa aaatcttgtt agaatgaaag aaagagaagt
    14101 tcttaatgaa atcaataatg atgataaagt gactttaggt gatatcatta aagatcagct
    14161 agcttaatga aaaaatacat tacaataagc attttgagta ttttattact cattttgctt
    14221 gctgttgttt ttacattgct ttggcaattt aaagctaatg taaatttcat tccacaattt
    14281 gctaaagata caaatacaca gccaagcatt caaacccaaa atcaagatct ttcatggcaa
    14341 gaagaattag caaaatggcc tacaagagat tttaccccag cagcagaaaa atttacctta
    14401 tattttgatg cggatactag cgagcttaag gagaaaaata aatattatca acttatagtt
    14461 ggaaaatatg atatttattc tatgttttgc ttaagacaga ctttaaattc ttttaatgtg
    14521 aagtattttc ttcttaaatc aggtgatagt ccagaaatct ttttggatac aggtaatgaa
    14581 aaacttatag atgatattat caaagaatta aaaaaatata aaataaatac agaagtaaag
    14641 gaaatttggt tatgaaaaaa aagattatag tatgtgatgc tattttggat aaaggtgtcg
    14701 atattctaag aaaagctgaa gatattgagc ttatagaagc tgcaaaagtt ccaaaagatg
    14761 aacttatgca aatgctaagc gatgttgaag ttgctattac tagaagttct acagatgtag
    14821 atataaattt cttaaatcat gccaaaaaat taaaagcgct tgtgcgtgct ggggtgggcg
    14881 tagataatgt tgatattcca gagtgttcta aaagaggagt gattgtgatg aatgtcccaa
    14941 ctgcaaatac tattgccgca gttgaactaa caatggcaca tcttttaaca tcagctagaa
    15001 gctttgtcaa tgctcataat tttttaaaaa ttgaaagaaa atgggaaaga gaaaaatggt
    15061 atggcattga attgatgaac aaaaccctag gggttatagg ttttggaaat ataggttcaa
    15121 gagtagctat ccgcgctaaa gcatttggta tgaaaatttt agcctatgat ccgtatattt
    15181 ctgcttctaa gattacagat ttagatatgg agcaagcaaa aaatttggat gaaattttag
    15241 aaaaaagtga ttttattacc attcacacac caaaaaccaa agaaaccaat ggtatgatag
    15301 gaaagcaaga aattgcaaaa atgaaagatg gaataagatt aataaattgt gctcgcggag
    15361 gattgtacac agaagaggct ttatatgaag gtttaaaaag tggtaaaata gcatggcttg
    15421 gtatagatgt gttcgataaa gaacccgcga ctaatcatcc tcttttagac tttgaaaata
    15481 tttcggttac ttctcaccta ggagcaaata ctttagaaag tcaagataat atcgcaagag
    15541 aagcttgtga gcaagcatta agtgcagcac gaggcgtggc ttatcctaat gccttaaatt
    15601 taccaattaa aactgaagac ttaccacctt ttgtagctcc ttatatagaa cttgtttcta
    15661 aaatggcttt tttagctgtt caaattgata aaaatccgat aaaaagtatt aaattagagg
    15721 ctgaaggaat tattggcgag tatgcaaatt ctatgctaac ctttgcagct gttggtgctt
    15781 tgggtggaat tttaggagag aaaattaatt atgttaatgc agaatttgta gccaaagaaa
    15841 aaggagttga attatcttgc gaaactcttc caaatagtgg ttataataat aaacttagtg
    15901 ttaaaattat caccgaaaat tcaaatatca gtgtttcagg aacagtgttt aatgaaaatg
    15961 aacaacgcat agttggatta aatggcttta aaactgattt taagccaaaa gggaaaatga
    16021 ttatttttaa aaacaaagac ataccaggag ttatagctaa aatcagttcc gttttggcag
    16081 ctaaaaatat caacatagct gattttaggc ttggtagaga tggttttggg tatgctttgg
    16141 ctgttgtttt gattgatgaa aaagttcaaa aagaagtatt agatgaacta aaacaattag
    16201 aggcgtgtgt atttgtccaa tatgttgaaa tttaaaattt taattataga agatgatata
    16261 gatttaaacg aactgcttgt tttaaagttg aaatctagtg gttatgaagt tatatcttta
    16321 gtggattttt ttggagttga agatttgctc gataatgagc aaatcgatct tttaatagtc
    16381 gatagaaatt tgcccagtgg agattcttta gaaaaaattc aagatttaag agagcaagga
    16441 tataaagaag cagttatttt tcttacagcc aaggctttgc atcaagattt gctcgaaggc
    16501 tttgaaagtg gttgtgatga ttatgtttgc aaaccttttg atttcaatga gcttttgctt
    16561 cgcattaaag caattttaaa acgccataaa aaagaagaag aaaaactatc ttttggtgat
    16621 tttattttag atttggctaa ttatgaattc ttttacaaaa atcaaaaatt agaaatctca
    16681 aatcttgact atgagctttt aaaatgtttt tttgaaaatc caaatacctt gcttactaga
    16741 caatttttaa gcgaaagtgt ttggaaagat gatactacaa gtgataaaac aatcaatata
    16801 gctctaacaa gacttagaaa taaatttcca aaactaaaag atcatattat aagtgttagg
    16861 ggtgttggct ataaattatg ctaaaaacta aaaatatttt tatagttttt tttgttgtat
    16921 tggctttgat ttttgggttt attttttata cttttactaa ttcttatctt aatttcttgc
    16981 ttataaaaca atatgaacaa aaaatcaaaa gtcttgatga tgttttaaaa ttttctctct
    17041 tagagcattt aaatgatgct aatatcaagg attttgctaa agatactagg gctgatttta
    17101 ttatcttaaa caatgatatg aaaataagtt ctgtaaaaaa tcctgatttt ttttctaatc
    17161 ttaaagaagg agaaatttta aatttcaatt caaaaaaaat tcttactaaa agctttattt
    17221 acaaaggata taaatatatt attattgttt atcctcgttt tttagattta gaactttttt
    17281 ggacaaaaat agcaatcggt tttggagtgt gcttgctgtt tgtttttatt ttaatgttgt
    17341 tgctaggtag aagaatagag aaaaatttta ataaaatttt ggatttttta gattctatag
    17401 gggatcataa agttgttata ttagaaaaag gaatgtttaa agaatttaat ttactaaatg
    17461 agaaactttt aaaaactaag gataaaattc taaagaatac ccaaaaaaat aaaaaacaaa
    17521 gcgataaaat tactttaaaa aatactcagc ttgctagtgt gatttctgct atttctcatg
    17581 agcttaaaaa tccattaagc gtgattgatc ttagcttaga gatgctaaaa gatgagaaat
    17641 tggaagataa aaaattaaaa aaggaattac tagaaaaaat ttcgcgtcaa agtattaaac
    17701 ttaatgcttt aacccataag cttaattttg tttttaatct taatagtgaa gccttgcaaa
    17761 tgcaagaatt tgatcttttt tttctatgtg aaaaaatcac taaaaaccca ggctttgaaa
    17821 gagttgtatt gcaaggtaaa agcacgaaag ttaaggctga tgaattttta atcgagcaag
    17881 tgattataaa tttgctttct aatgctttaa aatatagtca aaaagaagtc attttaacag
    17941 caagagatca aaagataata gtgcaagatt ttggaaaagg catagaagaa gataaaataa
    18001 aattgattac aaaaaaattt tataaaattg atgcaaaaag cgataattct tttggtttag
    18061 gacttttttt agtaaagaaa attttaaata tacataaaag ttatcttgaa atttctagca
    18121 ctttaggcta tggttctagt tttagcttta aactcagtca aggataaaaa atggctctta
    18181 tagatttaat tgaagcttca aaaaaatttg gagacaaaat agttttaaat gaagcaaatt
    18241 ttagtgcaaa cgagggagaa aagattgcta ttatagggaa aaatggagaa ggaaaatcta
    18301 cttttttaaa aacgctttta ggcacacttc ctttagatag cggtagagta ataagacaaa
    18361 atggaaaaag catagccatg ctttcacaaa gcgttgattt taacgcaaat ttaagtgtaa
    18421 aagaagctat caagcaagag cttgcagaaa tttacaatgc tttagaagaa tatgaaatac
    18481 tgcataaaaa attagaagaa gatcctagta ataaagatta tcttaaaaaa atagatacac
    18541 ttatgacttt gattgatagt aaagatgctt ggaatataga atctaaaata atacgcgttt
    18601 taaaagaatt tagtttgctt gagtatgaaa atcgcattat atctacttta agtggcggag
    18661 aaatacgccg cgttgggctt tgcatacttt tactaaaaaa tcctgatatt ttattgcttg
    18721 atgaaccaac taatcattta gatgtatata tgacaagctt tttggaagaa ttgctaaaaa
    18781 attcaaagat gtgtgtgatt tttatttccc atgatagata ttttattgac gctatagcac
    18841 acaagtgtgt agaagtagag cagggtaaac ttagtatttt taaaggcgga tatgcaaact
    18901 atttagagaa aaaaacacaa attttacaaa gccttgctaa gagccatgaa actcttttaa
    18961 agcaattaaa aagcgaagaa gaatggctta gaagaggggt taaagcaaga cttaaaagaa
    19021 atgaaggacg aaaagaacgc atttttaaaa tgcgtgaaga agcgaaaaaa aatcctggag
    19081 caatcaaacg cttaaaactt gaaatttcaa gagcggcttt aaattttaat ggagaaaaaa
    19141 cgatcaatcg taaaaaaatg ctttttgagc ttaaaaatat aagcaaaaat ataaacaata
    19201 aaaatctttt taaagatttt tcaacgcgta ttttacaagg tgaacgtata gctatcgtag
    19261 gaagaaatgg ttgcgggaaa tcaacattgt taaaaattct tctagggcaa ataaaacaag
    19321 attgcggtga aataaaacgc ggagagctta agataggata ttttgatcag gctagaagct
    19381 tggtaaattc tgataaaagc ttgcttgaaa ttttttgtcc caatggtgga gatagggttg
    19441 aagttcgcgg taaaaatatg catgtttatg gatatttgaa aaatttttta tttcctaagg
    19501 aatttttaga taaaagcgtg gctcttttaa gcggtggaga gaaaaatcgc gttgctttag
    19561 ccttgctttt tactaaagaa tatgatgttt tgattttaga tgagccaact aatgatcttg
    19621 atatagctac gattaatata ttagaagaat atttacttag ttttgaaggg gctattttgc
    19681 tagtatcgca cgatagatac tttgttgata aaatcgcaac aaaactttat gcttttgagg
    19741 gagatggata tataaatatt ttacacactc tttacactga atatcttgaa aatgaaaaag
    19801 aaattgaaga attggataat tttgctttag aacttcaaac ccaagagcaa aataataacc
    19861 aaaaagaaaa aagctctaaa aaattaagct acaaagaaaa tgagatatta aaaaaccatc
    19921 ctgaaaaaat agatttttta gagcaaaaga tagctaaatt aaatcaagat ttatccgatc
    19981 caaatgtata tcaagaaata ggtattaaca agctttatca agaacttgaa gtaatgcaaa
    20041 aagaacttga aattctagaa aatgagtatt ttttagtatt agagaaaagc gagaatttat
    20101 aattaaaaag attttatatt tttttactct atggagcggg aaacgagatt cgaactcgcg
    20161 accccaacct tggcaaggtt gtgctctacc cctgagctat tcccgcaaaa aataagtggt
    20221 gcccgaggtc ggactcgaac cgacacaagg ttgcccttac cagattttga gtctggcgcg
    20281 tctaccagtt tcaccactcg ggctcatttt taagatttaa agctaaaatt atactttttt
    20341 aggctaaaaa atactttaaa aataaaaagt attttcaaaa agacgatata aaattatata
    20401 atttaaattt ttggaacagt tattgctttt gtttattagc aatgtttgaa aagattttaa
    20461 ctttaatact ttagaggaaa aaaatgagaa ttacaaataa acttaacttc acaaatagcg
    20521 tgaataattc tatgggcggt caaagtgctt tatatcagat atctcaacaa cttgcttcag
    20581 gtttaaaaat tcaaaattca tatgaagatg caagcactta tatagataat acgcgtcttg
    20641 aatatgaaat taaaacatta gagcaagtaa aagaatcaac tagtagagct caagaaatga
    20701 ctcaaaatag catgaaagct ttacaagaca tggttaaact tcttgaagat tttaaagtta
    20761 aagtaactca agctgcaagc gatagcaatt ctcaaacctc aagagaggct atagcaaaag
    20821 aactagaacg cataaaagaa agtatagttc agcttgcaaa taccagtgtt aatggtcagt
    20881 atctttttgc aggttctcaa gttgcaaaca aaccttttga ttctaatgga aattattatg
    20941 gagataaaaa taatattaat gtagtaactg gagctggaac tgaaagccca tacaatatac
    21001 caggctggga tttatttttt aaagcagacg gagactataa aaaacaaata agcaccaatg
    21061 ttagttttac agataatcgt tgggatttaa ataaagaccc tgataaaact aaatatctca
    21121 caggagattc taaatggcaa cagcttatcg gacaaggtta tgtaaaagat aatggtttgg
    21181 atcctgataa agattttgaa tatgatgata aactagattt tcctccaaca actctttatg
    21241 ttcaaggtac taaacctgat ggaacaagct ttaaaagcgc tgtacttgta aaacctgaag
    21301 atactttaga agatgtaatg gaaaatatcg gagctcttta tggtaatact ccaaataata
    21361 aagtagtaga agtaagcatg aatgatagtg gtcaaattca aattacagat ctaaagcaag
    21421 gcaacaacaa actcgatttt cacgctgtag ctttcacacc acaagccgat gatagagctg
    21481 aacttacagg tattattgat gctgccaaac aagaaggcat ttcaatggat gaagttacaa
    21541 atagggttat gcaagctgct acagctgctc ctagtaacgg agatataaca aaattaaaca
    21601 gccctgtaac tgtaacaatc aataatcaac aattcacaat cgatttaaaa caaactgatt
    21661 ttatcaaaag taaaatgaca gatacagatg gaaatgctac taatggggct gattatgata
    21721 atgtatattt tgaaaaaaat ggaaatactg tttatggtaa tgtttctcaa gttatcaaag
    21781 gaagcaatgc ttatgcgact gattcaacca aacttagtga ggtaatggca ggagatagcc
    21841 taaatggtac tactttaaat ttaaaagtca attccaaagg tggaaattct tacgatgtta
    21901 ctataaattt acaaacttca actgtaagct atcctgatcc taataatcca ggtcaaacta
    21961 taagttttcc tataacccat accgatcctg caactggaaa tagtggagtt gttacaggat
    22021 caaatgatat tacttatggt caaattaatg atattatagg tatgtttgct gcagataaaa
    22081 ttccaaccca aagcataaca gctacaaatg gaaaagttga tgcaaatggt tataataatt
    22141 tacaacaact catgaaagat tcacaagcta ctgttgatgt aagtatggat tataaaggcc
    22201 gtattagtgt tactgataaa ctttcttcag gtactaatat agaaatttct cttagcgatt
    22261 ctcaaagtgg ccactttcca caaccaccat ttagcacaac ttcttcagta acaaatggtc
    22321 caaactttag ttttagtgca aacaactctt tggttattga tgagccaaat gtggatatta
    22381 ttaaagattt agattcaatg attgatgctg ttttaaaagg caatatgaga gcagattctg
    22441 aaagtgaaga tcctagaaat acaggtatgc aaggagcttt agaaaggctt gatcatttag
    22501 cagatcacat tagtaagctt aatacaacca tgggtgcata tcacaacaca atagaagatg
    22561 taaatactcg ttctactttt ttaagcgtga atgtacaatc tatcaaatca aatgttattg
    22621 atgtagatta tggtgaagca atgatgaatt taatgcaagt tcaacttgca tatcaagctt
    22681 ctcttaaagc tagtacaaca atttcccaac ttagcttatt aaattatatg taaaattttt
    22741 tatggtataa tttggctttg attttatttt caaggaaaga atattaaaaa agaagccatt
    22801 tttaccagct ctacacttgt tattttttat ctttgtcttt gtatgctagc acctagcatg
    22861 ggagaatggg tttacaaggc taatttattt ttatttggag aatttgggta ttattatcca
    22921 ttttctttgc tt
//
LOCUS       DAPWGO010000022        20636 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.023, whole genome shotgun sequence.
ACCESSION   DAPWGO010000022 DAPWGO010000000
VERSION     DAPWGO010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20636)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20636)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20636
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.023"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            47..475
                     /locus_tag="RJ336_000722"
     CDS             47..475
                     /locus_tag="RJ336_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213183.1"
                     /translation="MQINNSLNSLSQYVKVNSNEENQNSKNQEQNALAQDPAVEVNIS
                     KEAKEKSNTSNQNNSQAPAQALNAQNNTQQDSSSDSEDKLTELTQKLAEIQAKIVELT
                     AKMSKANEDQIKSIESQIATLNAQASTIQAQIQELQSQQA"
     gene            541..1797
                     /gene="murA"
                     /locus_tag="RJ336_000723"
     CDS             541..1797
                     /gene="murA"
                     /locus_tag="RJ336_000723"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDZ5213184.1"
                     /translation="MTYLEIEGTNHLSGNVTISGAKNAALPLIVSSILAKNEVKINNV
                     PNVADIKTLISLLENLGAKVNFQNNSALLNTNTLNQTIAKYDIVRKMRASILTLGPLL
                     ARFGHCEVSLPGGCAIGQRPIDLHLLALEKMGANIQIKQGYVVASGNLKGNEILFDKI
                     TVTGSENIIMAAALAKGKTKLLNVAKEPEVVQLCEVLKDAGLEIKGIGTDELEIYGTD
                     GELLEFKEFSVIPDRIEAGTYLCAGAITNSKITLDKVNATHLSAVLAKLHQMGFETLI
                     AEDSITLLPAKEIKPVEIMTSEYPGFPTDMQAQFMALALKANGTSIIDERLFENRFMH
                     VSELLRMGADIKLNGHIATIVGGKELNAADVMATDLRASSALILAALAAKGTSKVHRI
                     YHLDRGYENLEEKFKGLGAKITRLEE"
     gene            1794..2954
                     /locus_tag="RJ336_000724"
     CDS             1794..2954
                     /locus_tag="RJ336_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDZ5213185.1"
                     /translation="MKNIFETLKDLEDQISCLDESELISLEKAKDRILAKDLYARKNL
                     PSFDNAALDGYAFNYTDINEALEIKGTIFAGDKNFYTVAKNECYKIMTGAKMPKNADT
                     ILMLEDEYIEENKLIIKKAPKQYNAYRYKGEELKKGEILLQKGTKLNDKHIALLASQG
                     LYKIEVIRKIRIGIFSSGNELKEPWQECDEESIYNTNALSLLTMLQNTSYLGIIKDNF
                     KSTKEALENTNFDLLITSGGASVGEADFMEKALDELGFTPLFKGLKARPARPTKLYRK
                     GKNFVLILPGNPMAAYLSCFIFAKKIIALLSGNLDNPLKFHATMGMDLKLKSGRNNLI
                     LGNLEKDIFTPFNENKFGSGMILPLIKSEFLLISEENTSELKKGDEITLLKI"
     gene            complement(2976..3824)
                     /gene="lepB"
                     /locus_tag="RJ336_000725"
     CDS             complement(2976..3824)
                     /gene="lepB"
                     /locus_tag="RJ336_000725"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDZ5213186.1"
                     /translation="MEILKKLYKFSQSWTGTVVIVLLVIFFFIQAFVIPSGSMKNTLL
                     VGDFLFVKKFSYGIPTPHIPWLEIPVLPDFNKDGHLIKAQGPQRGDIVVFRNPRNEKE
                     HFVKRCVGTGGDRMVYANKTLYVRMHEGDEFMKEHYPNDLVTLGGQIYVKEPYKQKGI
                     HYDPKKDIESDILRFLSIGDFAMSPTYIKELGNHIGFSGGNAYVFDVPENEYFMMGDN
                     RDYSYDSRFWGSVPYRLIVGKPWFVYFSWDKDKNVRWERIGRFVDTLENDEQYIHDHD
                     DEDKLS"
     gene            complement(3834..4682)
                     /gene="folD"
                     /locus_tag="RJ336_000726"
     CDS             complement(3834..4682)
                     /gene="folD"
                     /locus_tag="RJ336_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDZ5213187.1"
                     /translation="MTLLDGKALSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPAS
                     QTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHI
                     CKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDA
                     VIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDM
                     VKEGVIVVDVGINRLESGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKS
                     AKNRLN"
     gene            4762..5109
                     /locus_tag="RJ336_000727"
     CDS             4762..5109
                     /locus_tag="RJ336_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213188.1"
                     /translation="MKIVLMFFLFSISLFGADFITLKEYSKMLYENPRGISCKECHGA
                     DGSEQILGYYMKNGIKTAYKVPSIQNLSFENFKNSLNQSKDAKSIMPNYSLTNDEIVT
                     LYNYIKQFSKEEK"
     gene            5106..6380
                     /gene="hemL"
                     /locus_tag="RJ336_000728"
     CDS             5106..6380
                     /gene="hemL"
                     /locus_tag="RJ336_000728"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDZ5213189.1"
                     /translation="MTNKKAFKEACKFIAGGVNSPVRAFANVQSEPKFISHGKGAYIF
                     DIDGNSYIDYVQSWGPLLFGHCDKDIQKACQKALHKGSSFGAPTLLETELAKLVLSDF
                     PHLEKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFN
                     SPSSLGVLEDVAKHTLVAKYNDINSVKELFEKNKDIACVIIEPIAGNMGLVPAKQDFL
                     EELAKICKNNQTLLIFDEVMSGYRASYLGSYGINHIQADIITFGKVIGGGLPAAAFAS
                     RAEIMDILSPLGGVYQAGTLSGNPLAMAAGIASLTKAKKKTKLYDKLGKLAKKLTQGM
                     KKLADEKGLPLQACHVGSMFGYFFTKDPVSNYQDALKSDLALFSKFHKNMLENGIYLA
                     PSQFETGFICSKMDDKIIDTTLEAVRESFKRI"
     gene            6377..6706
                     /locus_tag="RJ336_000729"
     CDS             6377..6706
                     /locus_tag="RJ336_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HDZ5213190.1"
                     /translation="MSNILKEEKNHLENSNSKRQKIIRKTLEAADGLSLGISMVVAVF
                     IGVGIGYLLKKFTPYPWLFWLGVFWGISAAILNVYKAYKVQVKSYEEFKERDELIKEK
                     IQKEKNK"
     gene            6706..7209
                     /locus_tag="RJ336_000730"
     CDS             6706..7209
                     /locus_tag="RJ336_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213191.1"
                     /translation="MEHKKALFCIFAIIHLFFWIIFSSLNHFKLDTFLSYEIAFFSVL
                     LIIFASYLNYKKVIIKKSKNYEKNFNFISSLFIKKKQNLSKIIHFKVLKDDLKPNVKE
                     KIHFFAMFFTLFKLMAYVILVAGFLFLHRQDKLDIFAYICGISSLLVCVFIFILYIKK
                     YESKKNY"
     gene            7187..8374
                     /locus_tag="RJ336_000731"
     CDS             7187..8374
                     /locus_tag="RJ336_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ5213192.1"
                     /translation="MSPKKIIKSMTALFAGMAFLFAGNALIVSSIGVILKENGESSLA
                     VGVVSSCFFVGALVGTISAHKIISRIGHIRSFGLFGAIFGISAMLHTVSENLIFWAVL
                     RFFIGICYYGLLMVIESWLNEKSKNAIRSRILGFYEIVFYLAFGIGVLIIALNLSKHS
                     VFILSATLILLSSLPLNLIKIKEPVLPASSPISIPKIFDIAPLAIVTSFIAGMLINGF
                     FSMASLFILLQGFDTKAVSYFIFCGVLGGFIAQTIIGTISDKLGRKFAIITCASIGFI
                     TMLIFIFFKLHLYMQYFLGITLGIGIFCLYALALARANDVLVSKNKGVELGRGVLFCY
                     SLGSLFGPLILGFLMQYFEIKGFIWFYIISLAFLILFAINKPNILNKKFKKKPGNMVI
                     FDD"
     gene            8367..10616
                     /locus_tag="RJ336_000732"
     CDS             8367..10616
                     /locus_tag="RJ336_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDZ5213193.1"
                     /translation="MINTQLASQIVNTQKNDLKVDNSASKDKTNLKDNPKEALAQALK
                     QNLGLSKDASSEEILAKFVQNETGTKLKELVNKLLDQINAQKNPDSPVLKQGKNLNLA
                     PNFANELKTLSTELAKSDTFTQVLDRLNQILKPASEIKNNNLAPLFKNSGVFLEAKLK
                     DALNEELLPKSFHSLLSTIKGLSSEKLSVQIAQLANTNLSPKDTLKELKNIINSSKNE
                     NKQILNQSSFKALLNLSSKLENFKNYISKNPSHAQEKITPIANKILKELNSIKNDFFK
                     ALNKPENLMIKDPNILKQTATAFEKLENTLKNILGNQASKIQDKENILENLLSNKENM
                     KEEKLNHNTKNQDEEKHIKASKEETLTDDTKTDIKQDSKNEENSHAKETDIKEDENLD
                     SDIKTHEEDTQDTKNDIQNNETENKPDNDIKNSTPNQEKIKDGKQEKSKENIKENPKF
                     YETKTENKTSINTNTNTSNPNTNNTQNLNNSQNIQSNNNQTMQNIFKNQEFIKQNIVK
                     NLAFNVENLDLEQVQDLSKNLNNLSRRLNESLKELEPYTQNAKLNQAELKNLEHKLNL
                     STKDLAQIKPKTEQDIAESLHHDVKSTLLQISNLAKNEGNEAVYNQANRLLAQIEINQ
                     LMSLANDSINTYLPFSWDDLNDSKIMFRRGKKDKFFAQIKLEFAKLGDLEILISLNNE
                     KYIDINIMAENIEFRKTIYENAHELKRNINKAGLLSANFFVGDIIRSKFDTRNMKNLD
                     LEMGMDKKV"
     gene            10613..10894
                     /locus_tag="RJ336_000733"
     CDS             10613..10894
                     /locus_tag="RJ336_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlhB-like flagellar biosynthesis protein"
                     /protein_id="HDZ5213194.1"
                     /translation="MSKIKRSIKKAVALGYQKEKNSAPKVLASGKGESAAKIISLAKE
                     HGVPIKEDEDLIEILSKLDLGDEIPPNMYKAVAEVFAFIYQMANKTPKN"
     gene            complement(10891..11691)
                     /locus_tag="RJ336_000734"
     CDS             complement(10891..11691)
                     /locus_tag="RJ336_000734"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDZ5213195.1"
                     /translation="MSFSKESSRLFGFVAGIKFPKMIQKVINENYVKYFNIDMSEFKS
                     PCEYESLNALFTRTLHIPRKLEEGFISPSDGKILECGSTFLANEEHFAFSIKGHTYSI
                     EELLKDSFEKDELKNGLDYVNIYLSPKDYHRYHSPCDMQILSATYTSGALYSVNEKHL
                     ERISNLYVKNERVSLKCQNEKGIFWLVFVGAQNVGKMRFNFDTSIQTNAKISHNFTRK
                     YENLNFKKGEELGNFELGSTIVLISQKGILNFNLKAGQGIKFGEKIAD"
     gene            complement(11688..12812)
                     /locus_tag="RJ336_000735"
     CDS             complement(11688..12812)
                     /locus_tag="RJ336_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDZ5213196.1"
                     /translation="MIFLIFSFIVLLIFGLANVYIYKRLIKKITLFKYFYKIFAFIFI
                     VLFLAQAVFLIFRRDEYLSDTWYEILAMLYAPTYCLFFMTLAWDFIKLILALMGKRDK
                     KYNLILRLIFEFSLIVLSVFLIYISINNALKTPEVKSVDVEIPNLKQDLKIAMLTDIH
                     LGKNLHENFLDKLITKVNLQSPDMVVIVGDLIDTNPKDLKNYISKLNDFNSTYGTFYA
                     LGNHEYYHGINEVLDLLRKHANMKILVNQNLDLGFINIAGLGDLAGLNKGLYAPDLAR
                     IKVDLNTSKASILLTHQPKTALLYDLSDFDLVLSGHTHGGQIFPFMFLVKLQQGFVHG
                     LYNLGEKTKLYVSSGAGFWGPSLRVFAPSEIVILNLKGKK"
     gene            12898..14193
                     /locus_tag="RJ336_000736"
     CDS             12898..14193
                     /locus_tag="RJ336_000736"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDZ5213197.1"
                     /translation="MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKA
                     RNIAGKEEEIKEILNLFGISWQHYYIQSENLKFHRQMALKLISEKKAFACFCTEEELE
                     AKKELAKKQGKAYRYDGTCEKLADIDVLECEKPFVIRLKKPTHTMKFTDFIKGELSFE
                     PENIDSFVIMRTDKTPTYNFACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNK
                     AMTYAHLPIILNEEGVKMSKREAHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTL
                     EEAIKWFDISKVSKAPARFDLKKLLQINREHIKMIKDDELNKILDLNKDLAQLAKFYT
                     QEASTIKELKEKMRAIFNTKDFGEFETECKILKELLKDIELFENYEDFKNELLSKSDL
                     KGKKFFMPLRIILTGNIHGPELGDLYPYIKNFIHELARI"
     gene            14196..14477
                     /locus_tag="RJ336_000737"
     CDS             14196..14477
                     /locus_tag="RJ336_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDZ5213198.1"
                     /translation="MVIDSFIISIFQVLQIVINIYTWIIIIAALLSWVNPDPYNPIVQ
                     ILYKLSYPAYTLVRKIPTRIGNIDLAPLIIVLALQFLGIFLGNILRSIL"
     gene            14474..16099
                     /locus_tag="RJ336_000738"
     CDS             14474..16099
                     /locus_tag="RJ336_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HDZ5213199.1"
                     /translation="MIKKILVFLFIFSSLNATQYSIEKLKKEENSLAKDYYIYRLLEK
                     NKISKKDAQDLNSHIFRYIGKIKSELEKIIPLKPYINPKYAKCYTYTANTILDANLTC
                     QSVRLNSLVFIASLNSKDRTTLAQTFKNQRPDLTNLLLAFNTSDPMSYIVQKEDINGF
                     FKLYNYSKKYDLDLNTSLVNKLPNHIGFKDFAQNIIIKKENPKFRHSMLEINPENVSE
                     DSAFYLGVNALTYDKTELAYDFFKKAAQSFKSQSNKDNAIFWMWLIKNNEEDLKTLSQ
                     SSSLNIYSLYAKELTNTPFPKIESLNPSKKKNNFNMQDPFAWQKINKQIRDANASQLD
                     VLAKEFDTQETLPIYAYILERKNNFKKHYFIMPYYDNIKDYNKTRQALILAIARQESR
                     FIPTAISVSYALGMMQFMPFLANHIGEKELKIPNFDQDFMFKPEIAYYFGNYHLNYLE
                     SRLKSPLFVAYAYNGGIGFTNRMLARNDMFKTGKFEPFLSMELVPYQESRIYGKKVLA
                     NYIVYRHLLNDSIKISDIFENLIQNKANDLNKS"
     gene            complement(15996..16481)
                     /locus_tag="RJ336_000739"
     CDS             complement(15996..16481)
                     /locus_tag="RJ336_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213200.1"
                     /translation="MKIYSVILGAFLLGACSLKDQAIVDINLKSQTLMFTQKYKITQD
                     KINAIITMSYLNPILDKTSKDDVLALSFTPNTLKIQNLEVFINNKKANIEKLDDEYLK
                     YIIQNNYTDYFKVSLPNVKEETKLVTKICLDHLPCFELNFQKYPKSLYYRSEDVDTQY
                     N"
     gene            16577..17068
                     /gene="mobB"
                     /locus_tag="RJ336_000740"
     CDS             16577..17068
                     /gene="mobB"
                     /locus_tag="RJ336_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HDZ5213201.1"
                     /translation="MKQLIMAFSGPSNSGKTTLITKIADNFLQQNLKVLIIKHDPADK
                     AQFDFNGKDSFKFFQSGAEVMVLSPTRTTFFSHENRDILKALKLAPNFDICLVEGLKT
                     LDLPRISVFCKEIDESYFTFSNAIASYEKISHPYLTWLDLNDIQAICRYILKNAKNLQ
                     GEL"
     gene            17070..17912
                     /locus_tag="RJ336_000741"
     CDS             17070..17912
                     /locus_tag="RJ336_000741"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDZ5213202.1"
                     /translation="MQEVISYIQKAVLEISNALKFPDTSYSQNQNFTGDTQLKFDVLS
                     DGIITKTLSQCSSIKAIISEEKDEILTLNERANFIVAYDPLDGSSLMDVNFAIGSIFA
                     IYEEKASAKNLRAALYSMYGARLELVICKDQPKLYRLNANNEFIFIKDLKMNEKGKIN
                     ATGGTQKFWEEKHAKFIKSLFDEGYRLRYSGAMVSDINQILLKGGGIFSYPATQDAPN
                     GKLRAFFEVFPLAFIIEKAGGKTTNGKNHSLLELEFDKIHATTPCFFGSEYEISKLLK
                     AYNE"
     gene            17905..18102
                     /locus_tag="RJ336_000742"
     CDS             17905..18102
                     /locus_tag="RJ336_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213203.1"
                     /translation="MSDIRDEFEQDMDKKKEILLSCQNSKNLNSCYNCDEIFNCQTRK
                     NYVDAVYNSMSKGKTEGGFDF"
     gene            18112..19998
                     /gene="metG"
                     /locus_tag="RJ336_000743"
     CDS             18112..19998
                     /gene="metG"
                     /locus_tag="RJ336_000743"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDZ5213204.1"
                     /translation="MRYITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLT
                     GTDEHGQKIEEAAKLRNSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVK
                     AMFLKMWQKGDIYKDEYEGHYCISCESFFTQSQLINDCSCPDCGKNTTILKEESYFFK
                     LSKYQDKILQWYEEKDPILPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDD
                     KHIIYVWLDALFIYISSLDFQSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDL
                     PLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFS
                     ENMLINRINAELSNEFGNLLNRIIGMSTKYSQGNILKEGVLKYYNTELNQAKEHLNLA
                     VEFLENLQCNRYLEELFKALSVANLAISKYEPWNLIKENKHEQANALVALCANILAKT
                     SLLLSPTLPKSCEKVALALNFEISSTNYAKMILDNELLDFKANPCEALFPKVEKALLK
                     QEIKEEPKKEESPKIKIDDFAKIEIKVAKVLDCQNIEGSEKLLKFQLELDDKEIRQVL
                     SGIAKHYKASDLIGKQVCIISNLKKAKIFGHESDGMILSAKSGDKLVLITPEQLVQNG
                     SLVG"
     gene            20002..>20636
                     /locus_tag="RJ336_000744"
     CDS             20002..>20636
                     /locus_tag="RJ336_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213205.1"
                     /translation="MQISNLGELLNATLIHEGSVLSVEGFAINLNELKAGFAFFNNDK
                     KEITQAVKKGAYAIITENDITIEDKDIFYFRVENLEQALVRFLRFFCEDKECEFLLFK
                     SYELSLCKAFYFNILKGNIFADFEKLIKAKKGEIFCYCEENYLNKLCAYSHSLKDANF
                     TLLSRSSFFFTTLICENLYFKNLNLPFFYANSFAKIISFLKEKSQKIIFDF"
BASE COUNT         7768 a         3141 c         3030 g         6697 t
ORIGIN      
        1 ataatgtcga tttagtgtaa tatatattat aaattaagga gaaaatatgc aaattaacaa
       61 ttccttaaat agcttaagtc aatatgttaa agtcaactca aacgaagaaa atcaaaactc
      121 taaaaatcaa gaacaaaacg ctttagcgca agatccagct gtagaggtaa atatcagcaa
      181 agaagccaaa gaaaaatcaa atacttctaa tcaaaacaat tctcaagctc cagctcaagc
      241 tttaaacgca caaaacaaca cacaacaaga tagtagcagc gatagtgaag ataaacttac
      301 agaattaaca caaaagcttg cagaaattca agcaaaaatt gttgaactaa ctgcgaaaat
      361 gtctaaagct aatgaggatc aaatcaaaag tattgaaagt caaatagcaa cattaaatgc
      421 ccaagcttca actattcaag ctcaaattca agaactccaa agccaacaag cttgattata
      481 ttttttcaaa agtttaagaa tgctataatg atgcattttt aaactttttc aaggaaaaat
      541 atgacttatc tagaaatcga aggcacaaat catctaagcg gaaatgttac aataagcgga
      601 gcaaaaaatg ctgccctacc cttgatcgtt tcaagtatac ttgctaaaaa tgaagtaaaa
      661 atcaacaatg ttcctaatgt tgctgatata aaaactctta tatctttgct agaaaattta
      721 ggcgctaagg tcaattttca aaacaatagt gctttattaa acacaaacac tcttaatcaa
      781 accatagcca agtatgacat tgtgcgtaaa atgcgtgctt ccatacttac tctagggcct
      841 ttacttgctc gttttgggca ttgtgaagta tctttgcctg gtggatgtgc cataggacaa
      901 agacctattg atttacatct tttagccttg gaaaaaatgg gggcaaatat acaaatcaaa
      961 caaggctatg tcgtagctag tggaaattta aaaggcaatg aaattctttt tgataaaatc
     1021 acggttacag gtagtgaaaa catcatcatg gcagcagctc tagctaaagg taaaaccaaa
     1081 ctcttaaatg ttgcaaaaga acccgaagta gttcaacttt gcgaagtttt aaaagacgca
     1141 ggacttgaaa ttaaaggcat aggtacagat gaacttgaaa tttatggcac tgatggagaa
     1201 cttttagaat ttaaagaatt tagcgttata cctgatagaa ttgaggcagg aacttatctt
     1261 tgtgctgggg ctattacaaa ttctaaaatt actttagata aagttaatgc cactcatctt
     1321 agtgcagttt tagcaaaact tcatcaaatg ggttttgaaa ctttgattgc agaagatagt
     1381 atcaccctac ttcctgctaa agaaattaaa cctgtagaaa tcatgacaag tgaatatcca
     1441 ggctttccaa ccgatatgca agcgcagttt atggcattag ccttaaaagc taatggaact
     1501 agtattatcg atgaaagact atttgaaaat cgtttcatgc atgtaagtga acttttaaga
     1561 atgggtgcgg atattaaact caacggtcat attgctacta tagtaggcgg aaaagaactt
     1621 aacgctgctg atgtcatggc tacagatttg cgtgcttctt cagcccttat cttagcagct
     1681 cttgcagcta aaggcacaag caaagtccat agaatttatc atcttgatag gggttatgaa
     1741 aatttagaag aaaaatttaa aggcttaggg gctaaaatca caaggcttga agaatgaaaa
     1801 atatctttga aaccttaaaa gacttagaag atcaaatttc atgcttagat gaaagtgaac
     1861 ttattagcct tgaaaaagca aaggatagaa ttttagctaa agatttatac gctagaaaaa
     1921 atctacccag ttttgacaat gctgctcttg atggctatgc ttttaattat actgatatca
     1981 atgaagcttt ggagattaaa gggactattt ttgcaggaga taaaaatttt tatacagttg
     2041 ctaaaaatga atgctataaa atcatgacag gggctaaaat gcccaaaaat gctgatacta
     2101 tcttaatgtt agaagatgag tatatagaag aaaataaact catcattaaa aaagctccta
     2161 aacaatacaa tgcctatcgc tataaaggcg aagaattaaa aaaaggtgaa attttacttc
     2221 aaaaaggcac caaacttaat gataaacata tcgccctgct tgcttctcaa gggctttata
     2281 aaatagaagt cataagaaaa attcgtatag gtattttttc aagtggaaat gagctaaaag
     2341 aaccttggca agaatgcgat gaagaaagta tttataatac caatgctttg tctttactaa
     2401 ccatgcttca aaatacttct tatttgggca tcatcaaaga taattttaaa agcactaaag
     2461 aagctttaga aaatacaaat tttgatcttt taatcacttc aggaggtgca agcgttggcg
     2521 aggctgattt tatggaaaaa gctttagatg aattaggctt tactccgctt tttaaaggac
     2581 taaaagcacg ccctgcaaga cctactaaac tttatagaaa gggtaaaaat ttcgtattga
     2641 ttttaccagg aaatcctatg gcagcttatc tttcttgttt tatttttgct aaaaaaatta
     2701 ttgctttatt aagtggaaac ctagacaatc ctttaaaatt tcatgctaca atgggtatgg
     2761 atttaaagct taaaagtgga agaaacaatc tcattttagg aaatttagaa aaagatattt
     2821 ttacaccatt taatgaaaat aaatttggat ctggtatgat acttccactt attaaaagtg
     2881 agtttttact tataagcgaa gaaaatacaa gtgaattaaa aaaaggtgat gaaatcacgc
     2941 ttttaaaaat ataatgtttg tgtttttcac aaacattagc ttaatttatc ctcatcatca
     3001 tgatcatgga tatattgttc atcattttcc aaggtgtcaa caaaacgccc tatcctttcc
     3061 cagcgaacat ttttatcttt atcccaagag aaatatacaa accaaggttt acctactatc
     3121 aacctataag gaacagaacc ccaaaaacga ctatcataag aataatcgcg attatcaccc
     3181 atcatgaaat actcattttc aggtacatca aaaacataag catttccgcc gctaaaacct
     3241 atatgatttc caagttcttt aatataagtt ggagacatgg caaaatcacc tatgctaaga
     3301 aagcgtaaaa tatcgctttc tatatctttt tttggatcat aatgaatacc tttttgttta
     3361 taaggttctt ttacataaat ttgccctcca agagtaacaa gatcattcgg ataatgttct
     3421 ttcataaatt catcaccctc atgcattctt acataaagtg ttttatttgc ataaaccatc
     3481 ctatctcctc ctgtgcctac acaacgcttt acaaagtgtt ctttttcatt tctaggattt
     3541 ctaaaaacaa ctatatctcc tctttgtggc ccttgtgctt ttatcaaatg cccatcttta
     3601 ttaaaatcag gcaaaacagg aatttccaac caaggaatat gaggagttgg gataccatag
     3661 ctaaattttt taacaaataa aaaatcccct accaacaagg tgtttttcat agaaccagaa
     3721 ggaataacaa aagcttgtat aaagaaaaaa atcaccaaaa gaacaataac tacagttcca
     3781 gtccaagact gtgaaaattt atataatttc tttaaaattt ccatagattt tccctaatta
     3841 agtctatttt tagcagattt aactgtgttt tctaaaagca tggctatagt cataggacct
     3901 actccacctg gaacaggagt tatataacta gattttttag atacctcttc aaaatccacg
     3961 tctccaacta tctttccact ttcaagacga ttgattccaa catcaacaac aatcactcct
     4021 tcttttacca tatccgatcg aagtaagttc acacaacctg ctgctactat aatcaaatca
     4081 gcttgcctag tataaaggct caaatctttg gttttaatat gacaaacgct tactgtagct
     4141 ccagcgttta aaagcatagt agccatagga cgacctacta tatttgaagc acctataata
     4201 acagcgtctt ttccttctaa atcaatttca taagccttca aaagcttcat aactccaagt
     4261 ggagtacaag gcaaaaaccc actttctaag cctaaattta aatatcctac attaatagga
     4321 tgaaagccat caacatcttt actacttata atactttcaa gtattaaatc tttacaaata
     4381 tgatcaggta agggaagctg aaccaaaatt ccatgaacac tatcatcgtg atttaaggta
     4441 ttaatcaatg ccaaaagttc attttgtgta gtattttcat taagatgata aactaaagat
     4501 ttaattccac attcttcaca ggctttagcc ttagatttta cataagtttg acttgcagga
     4561 ttatctccaa ctaagataac agctaaacag ctttcaatcc ctttgctttt caaaaattga
     4621 tttttttctt ttaattcttc tttgattttt gcgcttaaag ctttaccatc aagcaaagtc
     4681 attattttcc ttctataaat ttaatcactt ttttaaagta aaaattgtat catattaaaa
     4741 cttcattaac aaggtgaaac tttgaaaatt gttttaatgt tttttttatt tagtatcagt
     4801 ctttttggtg ctgattttat cactcttaaa gaatactcta aaatgcttta tgaaaatcca
     4861 aggggcatta gttgtaaaga atgtcatgga gcagatggaa gcgaacaaat tttaggatat
     4921 tatatgaaaa atggtattaa aacagcttat aaagttccaa gtatacaaaa tcttagtttt
     4981 gagaatttta aaaattctct taatcagagt aaagacgcaa aatcaatcat gccaaattac
     5041 tctttaacaa atgatgaaat tgtaacttta tataattaca tcaagcaatt tagcaaggaa
     5101 gaaaaatgac aaacaaaaaa gcttttaaag aagcgtgtaa attcatcgca ggcggtgtaa
     5161 attctccagt tcgtgctttt gcaaatgttc aaagtgagcc aaaatttatt tctcatggaa
     5221 aaggtgctta tattttcgat atagatggaa attcttatat agactatgtt caaagctggg
     5281 ggcctttact ttttggacat tgcgataaag atatacaaaa agcttgtcaa aaagcacttc
     5341 ataaaggttc aagttttgga gctccaactt tattagaaac tgaacttgcc aagcttgttt
     5401 tatctgattt tcctcattta gaaaagatcc gctttgtaag cagtggaaca gaagcaacca
     5461 tgagtgctat tcgtcttgcc cgtggtttta ctaaaaaaga caaaatttta aaatttgaag
     5521 gatgttatca cgggcattct gattcattat tagtgagtgc aggaagtggt gctgctactt
     5581 ttaactctcc tagttctttg ggtgttttag aagatgtagc taaacacact ttagtagcta
     5641 aatataatga tataaatagc gttaaagagc tttttgaaaa aaataaagat attgcatgtg
     5701 ttatcattga gcctattgct ggaaatatgg ggttagttcc agctaaacaa gattttttag
     5761 aagaacttgc taagatctgt aaaaacaatc aaactctgct gatttttgat gaggtaatga
     5821 gtggatatag agcatcttac cttggttcct atggaatcaa tcatatccaa gcagatataa
     5881 ttacttttgg taaggtaata ggaggcggtc tacctgcagc agcatttgct tctagagctg
     5941 aaattatgga tattttaagt cctttgggtg gagtttatca agcaggaact ttaagtggaa
     6001 atcctttggc aatggctgca ggtatagcaa gtcttacaaa agccaaaaag aaaaccaagc
     6061 tttatgacaa acttggaaaa ttagcaaaaa aacttaccca aggaatgaaa aaattagcag
     6121 atgaaaaagg acttccgctg caagcttgtc atgtaggttc tatgtttgga tactttttca
     6181 ccaaagatcc tgtatcaaac taccaagatg cattaaaatc tgatctagca ttattttcaa
     6241 aatttcacaa aaatatgctt gaaaatggaa tttatttagc accttctcaa tttgaaacag
     6301 gctttatatg ttcaaaaatg gatgataaaa ttatagatac aacactagag gctgttaggg
     6361 aaagctttaa aagaatatga gtaatatttt aaaagaagaa aaaaatcact tagaaaattc
     6421 caacagcaaa agacaaaaaa tcattcgcaa aactcttgaa gctgcggatg gtttaagtct
     6481 tggcatctct atggttgttg ctgtatttat aggtgtggga ataggatatt tacttaaaaa
     6541 atttactcct tatccttggc ttttttggct tggagttttt tgggggatca gtgctgccat
     6601 acttaatgtt tacaaagctt ataaagttca agtaaaaagc tatgaagaat ttaaagaaag
     6661 agatgagttg atcaaagaaa aaattcaaaa agaaaagaac aaataatgga acataaaaaa
     6721 gctctatttt gtatttttgc cattattcat ttattttttt ggatcatatt ttcatcgtta
     6781 aatcatttta aattagatac atttttaagc tatgaaatag ctttttttag tgttttattg
     6841 attatttttg cttcttattt aaattataaa aaagtcatta taaaaaaatc aaaaaattat
     6901 gaaaaaaatt ttaatttcat ttcatcgctt tttatcaaaa aaaaacaaaa tttatcaaaa
     6961 attattcatt ttaaagttct aaaagacgat ttaaagccaa atgttaaaga gaaaatccat
     7021 ttttttgcta tgttttttac tctctttaaa ttgatggctt atgtaatatt ggttgctgga
     7081 tttttatttt tacatcgcca agataaatta gatatctttg cttatatttg tggaatttca
     7141 tccttgctag tttgtgtgtt tatttttatt ttatatataa aaaagtatga gtccaaaaaa
     7201 aattattaaa tcaatgacag cactttttgc tggtatggca tttttatttg caggtaatgc
     7261 cttgatagta agctctatag gtgttatatt aaaagaaaac ggagaaagtt ctttagctgt
     7321 tggagtagta agttcttgtt tttttgtagg cgctcttgtt ggaactatca gtgctcataa
     7381 aattatttct cgtataggtc atatacgctc ttttgggcta tttggtgcta tttttggaat
     7441 ttcagctatg cttcatacag taagcgaaaa tcttattttt tgggctgttt taagattttt
     7501 cataggaatt tgctactatg gacttttaat ggtcatagaa tcatggctta atgaaaaaag
     7561 caaaaatgcc attcgatcta gaattttagg tttttatgaa attgtttttt atcttgcgtt
     7621 tggtattgga gttttaatca tagcgttaaa tttgagcaaa catagtgtat ttattctcag
     7681 tgcaacttta attttacttt catctttacc tttaaatcta attaaaatca aagaacctgt
     7741 tttgcccgca tcaagcccta tttctatacc taaaattttt gatatagctc ctttggctat
     7801 cgtcacaagc tttatagctg gaatgcttat aaatggcttt ttttctatgg catctttatt
     7861 tatacttttg caaggttttg atacaaaagc ggtttcttat tttatatttt gtggggtttt
     7921 aggtggtttt attgcacaaa ccatcatagg aactatttca gataaacttg gtcgcaaatt
     7981 tgctattatc acttgcgcaa gcataggatt tatcactatg cttatattta tcttttttaa
     8041 acttcatttg tatatgcaat attttttagg aattactctt ggtataggaa tattttgttt
     8101 atatgcttta gcacttgcta gagcaaacga tgttttagta agcaaaaata aaggcgtaga
     8161 gttaggtcgt ggggttcttt tttgttattc tttgggctct ttgtttggcc ctttaatttt
     8221 aggtttttta atgcaatatt ttgaaatcaa aggttttata tggttttata taatttcttt
     8281 agcattttta attctttttg ctatcaataa accaaatatt ttaaataaaa aatttaagaa
     8341 aaagcctgga aatatggtga tatttgatga ttaatactca actagcaagt caaattgtca
     8401 atacgcaaaa aaatgattta aaagtagata actctgcttc aaaagataaa acaaatttaa
     8461 aagacaatcc aaaagaagca cttgcacaag ctttaaagca aaatttaggt ttaagcaagg
     8521 acgctagtag tgaggaaata ctagcaaaat ttgttcaaaa tgaaacaggt accaaattaa
     8581 aagaacttgt taataaactt ttagatcaaa tcaatgctca aaaaaatccc gattcccctg
     8641 tacttaaaca aggaaaaaat ttaaatttag ctcctaattt tgctaatgaa ttaaaaactt
     8701 taagtacaga acttgcaaaa agcgatactt ttacacaagt tttagataga ttaaatcaaa
     8761 ttttaaaacc tgccagtgaa ataaaaaaca ataacttagc tcctttgttt aaaaattcag
     8821 gcgtattttt agaagctaaa ttaaaagatg ccctaaacga agaattacta cccaaaagtt
     8881 ttcactctct tttaagtaca atcaaaggtc ttagtagcga aaaactaagc gttcagatag
     8941 cccagcttgc aaatacaaat ttaagcccaa aagacacttt aaaagaatta aaaaatatta
     9001 ttaattctag caaaaatgaa aataagcaaa ttttaaatca aagttctttt aaagcacttt
     9061 taaatttaag ttctaaattg gaaaatttta aaaattatat aagtaaaaat cccagtcatg
     9121 ctcaagaaaa aatcacccct atagctaata aaattttaaa agaattaaat tccatcaaaa
     9181 atgatttttt caaagctctt aataagccag aaaatttaat gataaaagat ccaaacatcc
     9241 ttaagcaaac tgctaccgcc tttgaaaaac ttgaaaatac tttaaaaaat atactaggca
     9301 atcaagcttc taaaatacaa gataaagaaa atattttaga aaatctttta agcaacaaag
     9361 aaaatatgaa agaagaaaaa cttaatcata acacaaaaaa ccaagatgaa gaaaaacata
     9421 taaaagcatc aaaagaagaa actctcacag atgatactaa aaccgatatt aagcaagatt
     9481 caaaaaacga agaaaattcg catgcaaaag aaactgatat aaaagaagat gaaaatttag
     9541 attctgatat aaaaactcac gaagaagata ctcaagatac aaaaaatgat attcaaaaca
     9601 atgaaacaga aaataagcca gacaatgata taaaaaactc tactccaaac caagaaaaaa
     9661 ttaaagatgg aaaacaagaa aaatcaaaag aaaatatcaa agaaaatcca aaattttatg
     9721 aaacaaaaac agaaaacaaa acttcaatca atacaaatac caacacttca aatcctaaca
     9781 caaacaatac gcaaaattta aataattctc aaaatattca atctaacaat aaccaaacta
     9841 tgcaaaatat ttttaaaaat caggaattta taaaacaaaa tattgtaaaa aatttagcat
     9901 ttaatgtaga gaatttagat ctagaacaag tgcaagattt aagtaaaaat ttaaacaatc
     9961 tttctcgtag acttaatgaa agcttgaaag aacttgaacc ctatactcaa aatgccaagc
    10021 ttaatcaagc agaacttaaa aatctcgaac acaaactcaa tctttctacc aaagatctag
    10081 cgcaaattaa accaaaaaca gaacaagata tagctgaatc tttacatcat gatgtaaaat
    10141 caacactttt acaaatttca aatttggcta aaaatgaagg caatgaagct gtatataatc
    10201 aagctaatcg tcttttagca caaattgaaa tcaatcagct tatgtcttta gctaatgatt
    10261 ctatcaatac ttatctgcct ttttcttggg atgatttaaa tgattctaaa attatgttta
    10321 gacgcggaaa aaaggataaa ttttttgctc agattaaact cgaatttgca aaacttgggg
    10381 atttggaaat tcttatttct ttaaataatg aaaaatatat agatattaat attatggcag
    10441 aaaatattga atttagaaaa accatctatg aaaatgccca tgagcttaaa agaaatatca
    10501 ataaagcagg acttttaagt gcaaatttct ttgtaggtga tatcataaga agtaaatttg
    10561 atactagaaa tatgaaaaat ttagatcttg aaatgggtat ggataaaaaa gtatgagcaa
    10621 aatcaaaaga tcaattaaaa aagctgtagc tctaggctat caaaaagaaa aaaactctgc
    10681 cccaaaagtg cttgcaagtg gcaaaggtga aagtgctgct aaaattattt ctttagccaa
    10741 ggaacacgga gttcccatta aagaagatga agatttaata gaaattttaa gcaaacttga
    10801 cttaggcgat gaaattccac ctaatatgta taaagctgta gctgaagttt ttgcctttat
    10861 ctatcaaatg gcaaataaaa ctcctaaaaa ctaatccgct attttttctc caaatttaat
    10921 accctgccct gcttttaaat taaaatttaa aatccctttt tgagagatta aaactatagt
    10981 agaacccagt tcaaaatttc ctagttcttc gccttttttg aaatttaaat tttcatattt
    11041 tctagtaaaa ttatgagaaa ttttagcatt ggtttgtatg cttgtatcaa aattaaaacg
    11101 catttttcct acattttgcg ctcctacaaa aacaagccaa aaaatacctt tttcattttg
    11161 acattttaaa ctcactcttt cattttttac atataaatta ctaatgcgtt ctaaatgctt
    11221 ttcatttaca ctataaaggg cgccgcttgt gtaagttgcg cttaaaattt gcatatcaca
    11281 agggctgtga taacgatgat aatcttttgg agaaagatag atattgacat aatcaagccc
    11341 atttttaagc tcatcttttt caaagctatc ttttaaaagc tcctcaatgc tataagtatg
    11401 cccttttata gaaaaagcaa aatgttcttc atttgccaaa aaagtacttc cacactctaa
    11461 aattttacca tcacttggac tgataaaacc ttcttcaagt tttcttggaa tgtgcaaagt
    11521 tcttgtaaaa agagcattta aactctcgta ttcacaagga gatttaaatt cactcatatc
    11581 gatattaaaa tacttaacat aattttcatt aataactttt tgtatcattt taggaaattt
    11641 aatccccgct acaaaaccaa aaagcctcga actttctttt gaaaaactca tttttttcct
    11701 tttaaattta aaatcactat ttcactcgga gcaaaaactc taagacttgg cccccaaaat
    11761 cctgctccac tactcacata aagcttagtt ttttctccta aattataaag cccatgaaca
    11821 aaaccttgct gaagtttaac taaaaacata aaaggaaaaa tttgccctcc atgcgtatgc
    11881 ccacttaaaa caaggtcaaa atcacttaaa tcataaagca aagctgtttt aggttgatgt
    11941 gtgagtaaaa tactagcttt acttgtattt aaatccactt ttattcttgc taaatcagga
    12001 gcatataacc ccttattaag tccggctaaa tctccaagtc cagcaatatt tataaaaccc
    12061 aaatctaaat tttgattgac taaaattttc atattagcat gttttctaag taaatccaaa
    12121 acttcattga taccatgata atactcatga tttcccaagg cataaaaagt tccataagtg
    12181 gaattaaaat cattaagttt tgagatgtaa ttttttaaat ctttaggatt agtatcaatc
    12241 agatctccta ctattacaac catatcagga ctttgcaaat tcactttagt gatgagctta
    12301 tctaaaaaat tttcatgcaa atttttaccc aaatgtatat cagtaagcat ggcaattttt
    12361 aaatcttgtt taagatttgg tatttcaaca tcaacactct ttacttcagg tgtttttaga
    12421 gcattattta tacttatata aattaaaaac acacttaaaa ctataagaga aaactcaaaa
    12481 atcaaacgca aaataagatt atatttttta tctcttttac ccataagagc taaaatcaat
    12541 ttaataaaat cccaagctaa agtcataaaa aacaaacaat aagtcggcgc ataaagcatg
    12601 gctaaaattt cataccaagt atcacttaaa tattcatctc tacgaaatat taaaaacaca
    12661 gcttgggcta aaaaaagcac aataaaaata aaggcaaaaa ttttataaaa atacttaaaa
    12721 agagtaattt tcttgattaa tcttttataa atataaacat ttgctaagcc aaaaatcaat
    12781 aatacaatga aagaaaaaat taaaaatatc ataaaagtat tataaccaag taaaattaaa
    12841 tatccgtata aatttttctg ttataataag cttttaaata attttaaagg ctataaaatg
    12901 taccgttttg caccttctcc cacaggtgat atgcacatag gaaatttacg cgcagcaatt
    12961 tttaattata tctgtgcaag acaaaaaaat atggatttta tcttacgtat tgaagatact
    13021 gataaggcta gaaatatagc aggaaaagaa gaagaaatca aagaaatttt aaatcttttt
    13081 ggtatttcat ggcagcatta ctatatacaa agtgaaaatt taaaattcca tcgccaaatg
    13141 gctttaaaac ttataagtga aaaaaaagct tttgcttgtt tttgtaccga agaagaactt
    13201 gaagcaaaaa aagagttagc taaaaaacaa ggtaaagctt atcgctacga tggcacttgt
    13261 gaaaaactag ccgatattga tgttttagaa tgtgaaaaac cctttgttat ccgtcttaaa
    13321 aaacctactc atactatgaa attcactgat tttatcaaag gcgagcttag tttcgagcct
    13381 gaaaacatag actcttttgt catcatgaga acagataaaa ctccaactta taattttgct
    13441 tgtgcggttg atgatatgct tgaaaatgtt acttgtatta tacgcggaga agatcatgtt
    13501 tcaaacactc caaaacaaga acatatccgc gcaagcttag gttataataa agctatgact
    13561 tatgcacact tgcctatcat tttaaacgaa gaaggtgtta aaatgagtaa aagagaagca
    13621 cattcttctg taaaatggct acttgaaagt ggaattttac ctagcgcaat cgcaaattat
    13681 cttatcatgc taggcaataa aactccttgt gaaattttta ccttagaaga ggctataaaa
    13741 tggtttgata tttctaaagt ttcaaaagct ccagcaagat ttgatcttaa aaaacttttg
    13801 caaatcaatc gcgaacatat caaaatgata aaagatgatg agcttaataa aattttagat
    13861 ttaaataaag atcttgcaca acttgctaaa ttttacactc aagaagcaag caccataaaa
    13921 gaacttaaag aaaaaatgcg agctattttc aacacaaaag actttggaga gtttgaaaca
    13981 gaatgtaaaa ttttaaaaga actcttaaaa gatattgaac tttttgaaaa ctatgaagat
    14041 tttaaaaatg aacttttaag caaaagcgac ttaaaaggta aaaaattttt catgccttta
    14101 aggataattt taacaggaaa tatccacgga cctgagcttg gtgatcttta tccttatatt
    14161 aaaaatttta ttcacgaatt agcaaggatt taactatggt tatagactct tttattattt
    14221 ctatttttca agtactacaa attgtcatta acatttatac ttggattatt atcatcgcag
    14281 cacttttaag ctgggtaaac cctgatcctt ataatcccat agtgcaaatt ttatataaat
    14341 taagttatcc tgcttacacc ttagttagaa aaattccaac acgcattggt aatattgatc
    14401 ttgcgccttt gattatagtc ttagcattgc agtttcttgg catttttctt gggaatatct
    14461 taaggagtat attgtgataa aaaaaatact cgttttttta tttatttttt caagtttaaa
    14521 tgctacacaa tatagcatag aaaaactcaa aaaggaagaa aattcacttg ctaaggatta
    14581 ttatatttat aggcttttag aaaaaaataa aatcagtaaa aaagatgcac aagatttaaa
    14641 ttctcatatt tttcgctata taggaaaaat taaatccgaa cttgaaaaaa tcatcccttt
    14701 aaagccttat atcaacccaa aatatgctaa atgctatacc tatacagcaa atactatctt
    14761 agatgcaaat ttaacttgtc aaagtgtgcg cttaaattca ttagttttta tagcgagttt
    14821 aaattccaaa gaccgaacga ctttagctca aacctttaaa aatcaaagac ctgatttgac
    14881 aaatttatta ctagctttta atacttctga tcctatgagc tatatagtac aaaaagaaga
    14941 tattaatggt ttttttaaac tttataatta ttctaaaaaa tacgacttag atttaaatac
    15001 aagtttagtc aataaactac caaaccacat tggttttaaa gattttgcac aaaatattat
    15061 tattaaaaaa gaaaatccaa aatttagaca ttctatgcta gaaataaatc ctgaaaatgt
    15121 aagtgaagat tctgctttct atttgggagt caatgcctta acttatgata aaacagagct
    15181 tgcttatgac ttttttaaaa aggcggcaca aagttttaaa tcgcaaagca ataaagacaa
    15241 tgctatattt tggatgtggt tgattaaaaa caatgaagaa gatttaaaaa ctttatcaca
    15301 aagttcttct ttaaatattt atagtcttta cgcaaaagaa cttactaaca caccttttcc
    15361 aaagatagaa agccttaatc caagcaagaa aaaaaataat tttaatatgc aagatccttt
    15421 tgcttggcaa aaaataaaca aacaaattcg cgatgctaac gcaagtcaac tagatgtctt
    15481 ggcaaaagaa tttgacacac aagaaacctt gcctatttat gcttacatat tagaacgcaa
    15541 aaataatttt aaaaaacatt attttataat gccttattat gacaatataa aagactataa
    15601 caaaacaaga caagctttaa ttttggctat tgccagacaa gaaagtcgtt ttattccaac
    15661 tgctatttca gtttcttatg ctttaggcat gatgcaattt atgccatttt tagccaatca
    15721 cataggggaa aaagaattaa aaattccaaa tttcgatcaa gattttatgt ttaaacctga
    15781 aatagcatat tactttggaa actatcatct aaattacctt gaatcgcgtt taaaatctcc
    15841 actttttgtc gcttatgctt ataatggcgg tataggattt actaaccgta tgcttgcaag
    15901 aaatgatatg tttaagacag gcaaatttga acctttcttg tctatggagc tagttcctta
    15961 tcaagaaagc cgaatttacg gaaaaaaagt tctagctaat tatattgtgt atcgacatct
    16021 tctgaacgat agtataaaga tttcggatat ttttgaaaat ttaattcaaa acaaggcaaa
    16081 tgatctaaac aaatcttagt tacaagctta gtctcttcct tgacattagg aagagatact
    16141 ttaaaataat cagtatagtt gttttgtatt atatatttta agtactcatc atccaatttt
    16201 tcaatattgg cttttttatt attgataaaa acttctaaat tttgaatttt taatgtattt
    16261 ggagtaaaag acaaggccaa tacatcatct ttacttgtct tatctagaat tggatttaaa
    16321 taagacatag ttataatggc attaatctta tcttgtgtga ttttgtattt ttgagtaaac
    16381 attaaagttt gagattttaa atttatatcc acaatcgcct gatcttttaa agaacaagct
    16441 ccaagcaaaa aagcacctaa aattacacta taaattttca ttctttttcc atatttttta
    16501 gtattattgt agccttttaa ccctattttt tggtttaaaa agatataatt ttacaaaaaa
    16561 attaagagta tattttatga aacaacttat catggctttt agcgggcctt caaattcagg
    16621 aaaaactaca cttatcacaa aaatagctga taattttttg caacaaaatt taaaagtttt
    16681 aatcattaaa catgatcctg ccgataaagc tcaatttgat tttaacggta aagatagttt
    16741 taaatttttc caaagcggag ctgaagtcat ggttttaagc cctacaagaa caactttttt
    16801 ttctcatgaa aatagagata ttttaaaagc tttaaaatta gcacccaatt ttgacatttg
    16861 tttggttgaa ggattaaaaa ctcttgattt accacgcatt agcgtatttt gcaaagaaat
    16921 tgatgaaagt tattttactt tttcaaacgc tattgcaagc tatgaaaaaa tttcccaccc
    16981 ttatcttact tggcttgatt taaacgatat acaagctatt tgtcgataca tacttaaaaa
    17041 tgctaaaaat ttacaaggag aattataaaa tgcaagaagt gatttcttat atacaaaaag
    17101 cggttttaga aatttctaac gctttaaaat ttcccgatac aagctacagt caaaatcaaa
    17161 attttacagg cgatacccaa ctcaaatttg atgttttaag cgatggaatc atcacaaaaa
    17221 ctctaagtca atgttcaagc attaaagcca tcataagtga agaaaaagac gaaattttaa
    17281 cgcttaacga gagggcaaat tttatcgtag cttatgatcc tttagatggt tctagcttaa
    17341 tggatgttaa ttttgccata ggttctattt ttgccatcta tgaagaaaaa gcaagtgcta
    17401 aaaatttaag agctgcactt tatagtatgt atggagcgcg cttagaactt gtgatttgca
    17461 aagatcagcc aaaactttat cgcttaaatg caaataatga atttattttt ataaaagatc
    17521 ttaaaatgaa tgaaaaaggc aagattaatg ctacaggcgg aacgcaaaaa ttttgggaag
    17581 aaaaacatgc caaatttatc aaaagtcttt ttgatgaagg ctatcgctta agatattctg
    17641 gagccatggt aagcgatatc aatcaaattt tattaaaagg gggtggcatt tttagctatc
    17701 ctgcaacaca agatgcgcct aatggcaaac ttcgtgcctt ttttgaagtc tttcctctag
    17761 cctttatcat agaaaaagca ggcggaaaaa ctacaaatgg aaaaaaccac tccttacttg
    17821 aacttgaatt tgataaaatc catgcgacaa ctccttgttt ttttggctca gaatatgaaa
    17881 tttcaaaact tttaaaggct tataatgagt gatattagag atgaatttga gcaagatatg
    17941 gataaaaaaa aagaaatttt actttcatgt caaaactcaa aaaacctaaa ctcttgttat
    18001 aattgcgatg aaatttttaa ctgccaaact agaaaaaatt atgttgatgc agtctataac
    18061 agtatgtcta agggtaaaac cgaaggcgga tttgactttt aaaggaaaaa aatgcgttat
    18121 attacaacac caatttatta tgtaaatgat gtgcctcatt taggtcatgc ttatactacc
    18181 atcatagccg atactttagc aagattttat cgtttgcaag gacatgaaac aagatttcta
    18241 acaggaacag atgagcatgg acaaaaaatc gaagaagctg ccaaactaag aaattccact
    18301 cctcaagaat atgctgataa aatcagtttt gaatttaaaa aattatggga tgaatttgaa
    18361 atcacctatg atatttacgc aagaacaact gatacaaggc atattgaatt tgttaaagct
    18421 atgtttttaa aaatgtggca aaaaggcgat atttataaag atgaatacga aggacactat
    18481 tgtatttctt gcgaaagctt ttttactcaa agtcagctta tcaatgattg ttcttgtcca
    18541 gattgtggca aaaacactac gattttaaaa gaagagagtt atttttttaa actttcaaaa
    18601 taccaagata aaattttaca atggtatgaa gaaaaagatc ccatcctacc aaaaaacaaa
    18661 aaaaacgaac ttataaattt tgtccaaagc ggccttaaag atctttccat tacaagaaca
    18721 agttttgatt gggggattaa actgcctcaa gaaattaatg atgataaaca tattatttat
    18781 gtatggcttg acgcactttt tatctatata agctctcttg attttcaaag caagggagaa
    18841 aatgctaaat tttggcctgc gcatgtgcat ttagtaggaa aagatatttt gcgttttcat
    18901 gccatttatt ggccagcttt tttaatgagc gtagatttac ctttgccaaa atttataggt
    18961 gcacatggct ggtggactaa agaaggtgaa aaaatgagca aatctaaagg caatgttgta
    19021 aaacctaaag aagtggttga tgcctatgga agcgaagctt ttagatattt cttgcttaga
    19081 gaagtgcctt ttggtaatga tggggatttt agcgaaaata tgctgataaa tcgtatcaat
    19141 gctgaactaa gcaatgaatt tgggaatttg cttaatcgca ttataggtat gagtacaaaa
    19201 tattctcaag gaaatatttt aaaagaaggt gttttaaaat attacaatac tgaactaaat
    19261 caagcaaaag aacacttaaa tttagcggta gaatttttag aaaacttaca gtgtaatcgt
    19321 tatttagaag aactttttaa agccttaagc gtagcaaatt tagccatcag caaatacgaa
    19381 ccttggaatt taatcaaaga aaacaaacac gaacaagcta acgctttagt tgcactttgt
    19441 gcaaatattt tagccaaaac aagcctttta ttaagcccta ctctaccaaa gtcctgtgaa
    19501 aaagtggctt tagctttaaa ttttgaaatt tcatctacaa attacgcaaa aatgatactt
    19561 gataatgaac ttttagattt taaagcaaat ccttgcgaag ctttatttcc aaaagtagaa
    19621 aaagctcttt taaaacaaga aattaaagaa gaacctaaaa aagaagaaag tcctaaaata
    19681 aaaatcgatg attttgcaaa aattgaaatc aaagtcgcta aggtgcttga ttgtcaaaat
    19741 atagaaggga gtgaaaaact tttgaaattt caactcgaac ttgacgataa agaaatccgt
    19801 caagtactct caggcatagc aaaacactat aaagccagtg atttaatcgg taaacaagtt
    19861 tgcattataa gcaatcttaa aaaagctaaa atttttggac atgaaagcga tggtatgata
    19921 ctttctgcaa aaagcggaga taaacttgtt ttaatcaccc ctgaacaact tgtacaaaac
    19981 ggttctttag taggctaaaa tatgcaaatt agcaatttag gtgaactttt aaacgcaacg
    20041 ctcattcatg aaggtagcgt tttaagtgtg gaaggttttg ccataaattt aaacgaactt
    20101 aaagcaggct ttgccttctt taataacgat aaaaaagaaa ttacccaagc tgtaaaaaaa
    20161 ggcgcttatg ctataattac agaaaatgac attactattg aagataaaga cattttttac
    20221 tttagagtag aaaatctaga acaagctctt gtaagatttt tacgcttttt ttgtgaagat
    20281 aaagaatgtg aatttttact ttttaaatct tacgaactaa gtctttgcaa ggctttttat
    20341 tttaacattt taaaaggaaa tatttttgct gattttgaaa aactaatcaa agcaaaaaag
    20401 ggtgaaattt tttgttactg tgaagaaaat tacttaaata aactttgcgc ctattctcat
    20461 agtctaaaag atgctaattt taccttatta tcgcgatcta gcttcttttt tacaactttg
    20521 atttgtgaaa atttatattt taaaaatctt aatttgcctt ttttttacgc aaatagtttt
    20581 gcaaaaatta tttctttttt aaaagaaaaa agtcaaaaaa taatatttga ttttaa
//
LOCUS       DAPWGO010000023        19804 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.024, whole genome shotgun sequence.
ACCESSION   DAPWGO010000023 DAPWGO010000000
VERSION     DAPWGO010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19804)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19804)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19804
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.024"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..1301)
                     /locus_tag="RJ336_000745"
     CDS             complement(<1..1301)
                     /locus_tag="RJ336_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HDZ5213206.1"
                     /translation="MKLKLNFLPYFSFIPKKLNTNSIIFKIIKVFFIAILLSNSIYLS
                     FFENIFTQTISPFLAIWGLVLLLKSKNSKQYFWIGFFVGILWFWWIGLSSIYFNLNYL
                     VPIIPIIIGFIYGLLFRLCYLLKFDFLRLCGIFCISFIHPLGFDWLNWGIFTVYGFFD
                     PSYRGIICIFLIAYFIYEGYISRYYKIAIVLILFFSGFQYNEKQAQTLNLNYKLINTN
                     ISQDQKFLQENLKSNSDILIQDILQAINEKKELVILPETAFAFDLKNTKYELILKELS
                     YKITIITGAFHVEKEHTYNSTYIFKKGNVYILNKHFLVPFGEEIPFFKDLTKKYFLKN
                     IEEFSKGPIQSKYKLDNQIITNAICYEATKEQNYQNSQIIIALSNNAWFNNSSEYKLQ
                     QLLMKFYASKYGVSVYHATNGKENIVILPKKLLSKDWKNLS"
     gene            1274..1546
                     /gene="yajC"
                     /locus_tag="RJ336_000746"
     CDS             1274..1546
                     /gene="yajC"
                     /locus_tag="RJ336_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDZ5213207.1"
                     /translation="MAENSILTSLLPLVVLFAIFYFLVIRPQQKQAKAHKQMLESLQK
                     GDKIITNGGLICEVVKPEEDFIKVKLNEDNVTAKISREFIAKKIDA"
     gene            1539..3119
                     /gene="secD"
                     /locus_tag="RJ336_000747"
     CDS             1539..3119
                     /gene="secD"
                     /locus_tag="RJ336_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDZ5213208.1"
                     /translation="MRNSKINYRLIIFIAVFIFGVAFSLPSFLQSERGAKINLGLDLQ
                     GGLYMLLGVDNEEAVKSKIKSIASSLSYSFNKENILNDGLNTHDDILEFTLLDNADIA
                     KVENLLKEIKGINIQSENMHYKISFTSEEVKNIENFALLQAVETIRNRLDQFGLAEPT
                     VAKQGDDKILVELAGIKTKEDELRAKERITKAAHLQLMEVDDSKMGQASTMSDAEAAS
                     YGLILVSDSRNPNLKYTLKSIPILDGSMLTDARVGISDKSNYPVINFTLNAEGSKKFA
                     DYTGANVGKRLAIVLDNKVYSAPSINERIGGGSGQISGAFTQEEARDVAVALRSGALL
                     APVKLLEQRSIGPSLGADSIKMSMIALIGASVFIVIFMMMYYGVAGIFANIAMLVNVL
                     VVVAVMAMFGATLTLPGMAGLVLTVGMAVDANVIINERIRELLRDGVNIRASIEQGYK
                     NAMSAIIDSNITSLVTSVALYAYGTGAVKGFAVTLGIGIVVSMITAILGTHGMFDYFM
                     QRIEKSNNTRFWFGYRRR"
     gene            3119..4090
                     /gene="secF"
                     /locus_tag="RJ336_000748"
     CDS             3119..4090
                     /gene="secF"
                     /locus_tag="RJ336_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDZ5213209.1"
                     /translation="MQFFSEKKIYDFMRMRFAAISLSFILFFGSIYLLWDRGLQYGID
                     FSGGTLVQLKYENAAPITQIREILEKQGTFQNLSVTEFGSNEEVTIRFLGSNDNVSND
                     IGEHISTLLKDTGKFEVRRADVVGPKVGDELRNKGLMAIAVSLIAILIYIALRFEWRF
                     ALAAIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKT
                     SKKTELAPIINESVSATLSRTVLTSGLTLATVVILYFFGGEMIQGFSLALIVGIIAGT
                     LSSIFVASPTLLWFKFSVLEFRNKEIEKAKRKQDKERNRAMYEKGTV"
     gene            4100..6529
                     /locus_tag="RJ336_000749"
     CDS             4100..6529
                     /locus_tag="RJ336_000749"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDZ5213210.1"
                     /translation="MAYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSG
                     RIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYEN
                     IAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKEANVNWCEQD
                     QTVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEELLKDLEELKDKWPNQVLTM
                     QENWIGKSEGLEFSLNLDEESKQKTKESSLEVFTTRADTIYGVSYIALAPEHKIVQNL
                     LSQNLLNQDVLNKIKAIQNQSPRERQSSEKEGYFLGIYAIHPLSGEKIPLWVANFVLA
                     DYGSGAVMAVPAHDERDFEFATKYNLAIKQVIQTQENLPYTQKSGKLIHSQEFDNLDC
                     NEARLKIISQFEAKNIGKRVVNFKIRDWGVSRQRYWGAPIPMIKCQSCGIVPQKLENL
                     PITLPEDVQITGEGNPLDKHPTWKNCICPKCGKEAQKESDTLDTFFESSWYFARFASD
                     EKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRGLGYLTQNEPFDR
                     LLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE
                     GAYRFICKLYDRAQNVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFN
                     TLIAACMEALNALALCKNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKKLE
                     LKEEIFVKDTLNLAVSINGKKRAEFEISSSASKEEILAFAKENTAKWLEGKSIVKEIY
                     VEGKLVNLVIK"
     gene            6526..7038
                     /locus_tag="RJ336_000750"
     CDS             6526..7038
                     /locus_tag="RJ336_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213211.1"
                     /translation="MKKILIFCIGLFLGACGYVPTSKIANNIFDEKVYVNVELSQQDP
                     KNSIYVADTLKEMVISKLGRKLALKHEADDVINVKMNNLEFIPLAYDKNGYVISYKAK
                     LNLDFNVVFKDGSSQAFSTSGSYNFEISPNSIISDSARYEAIRAASSEAFDEFISVIA
                     IKGQKRDSKY"
     gene            7022..8419
                     /locus_tag="RJ336_000751"
     CDS             7022..8419
                     /locus_tag="RJ336_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213212.1"
                     /translation="MIPNTNEIAKQTLIALKERKLKPTPENYTEIFEELSLKYGITSS
                     NKAKLDKYKTLLLPIYQQELNSKTIRSLEELISFLISVLNRQSGKQFSEFFDFLYTIS
                     KTLQISKDKKIRDLAKVTSIRISKTMDSESIYLLTKKWKELERNYDENDLEEQARKYG
                     ISKYDDYDSVIKKLLVKLEERSYEHFSELLCLGLNPSLVEDLKIQGFIQNLTQKPFVI
                     GEENFKNELMEFINHRIMVDNMYVQKNLNFFNDNLKKIYELLVLLNKSNEKNMDFINT
                     LKPDENGEVKLSFEDLKLKFKQLGEKITSLNNQIEFTQSLEEREAWSVLKELDKMDEN
                     FNKYKVNYSLALFSIVNYRFIMEKYGMGSLNEIFVRFKKILKDSCSEFDELWMIDEKS
                     YLIVSPGKSKDEITQLVNTNLKTIENFRFIYKQDIITPKIHVAYLDKQSKPSINILDE
                     LIKQIAAVNEQHNES"
     gene            8385..9569
                     /locus_tag="RJ336_000752"
     CDS             8385..9569
                     /locus_tag="RJ336_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDZ5213213.1"
                     /translation="MQRLMNNIMKVENFLAQKSINYDKIDRFLMFRMYEKYKKYFKNI
                     PIIQLIGTNGKGSTGRYLTQLLENLNYKIGHYTSPHIFSFNERFYLDGKIANDEELEQ
                     AHIRLEEIFKQDLQKLSYFEYATFLAMILFQKCDFIVLEAGVGGEYDATSVFERRMNI
                     FTRIGFDHIQILGNSLEDIARTKLKVMAPVALISDEQEQNVLNLAKKIAFLKKANLQV
                     SSLNPFLKEKFEIYCKKFVLPCFLKHNLKLALKACEILTSQEKTLEALKKLQGLNLQG
                     RCQEISPNFFVDVGHNPMAAKAMLDKFQGEKINLIYNAYLDKDIFQILNTLKPIIDTI
                     QIYKYKSAERKLADDEIYSIASKLGIQCKEFVKLEENKKNLVFGSFMLVENFLKEWCG
                     KK"
     gene            9556..10458
                     /locus_tag="RJ336_000753"
     CDS             9556..10458
                     /locus_tag="RJ336_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDZ5213214.1"
                     /translation="MVKNKFTITITDINGSRHFYLNQIIKKIVFYTIAFIVLFLVFSG
                     FYIKYLDSKLSDISEKREELLKKSKELELSNSQMQKSIEEKTQQYAAIEDKIASFEEA
                     LGLEAENNLTISARLDNLQLTNEQQLGILGQIPNGWPIENKGITGNFGWREHPLLKRR
                     EFHPGIDLRAEIGTPIYAPASGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMMRKEV
                     VKAGQFVNKGQLIGYSGNTGLSTGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQE
                     RRVPWQSLIKAVSAQHPALAQKQQ"
     gene            10395..10790
                     /locus_tag="RJ336_000754"
     CDS             10395..10790
                     /locus_tag="RJ336_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HDZ5213215.1"
                     /translation="MAIFNKGGISPTSSSSSETTVISSGARIEGKFYFASMLHVDGEL
                     SGIIHSESIVVIGKNGNLKGELQADKIVVNGCFEGQLEANSLEILAGGVVNGDISTQK
                     ISIENGGRFNGTSKIKEDTIKLIENNNEE"
     gene            10790..13726
                     /locus_tag="RJ336_000755"
     CDS             10790..13726
                     /locus_tag="RJ336_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDZ5213216.1"
                     /translation="MQASFYEYLQNPKICELFLCKDEKQADLLAQVSRFKGLKTFVLP
                     DFRAQFGDDLRAFSKELFDLCKILNAYHKEEEKKILISPLNTVLKKLPSKKHLQNYHI
                     DKKQNFDLKCFEDEISRLGYEFVDIVQDKGEISIRADIIDIFCINEENPIRILLFGEE
                     IESIRYFDLQSQKSIPNELEHFEICPFLKYFDKENYEIFKDKLEDFQSDTLIHDINSL
                     GFWCIDDFFDYLELDFLACEKFDINEYEKDISFVNAKILPQAKKFKELQSSYNKDFFE
                     FHKNKKITLLAKNEALFKALELEDTQNIHFVKSDLRLNLISPEELIISLNQKEKQKTR
                     KKASLIIDELKNGDYIVHEDYGVGKFLGLEMIVISGAKKEFVAIEYQNSDKLLLPVEN
                     LYLIDKYLGVSGSIPSLDKLGKTSFIKLKEKLKTKLLAIASEIVIMAAKRSLVQAKKI
                     TVDLNRQTDFIASAGFIYTSDQDKACYEILQDFQSGKVMDRLLSGDVGFGKTEVAMNA
                     IYPVVKSGFCAFLFAPTTLLSHQHYKTLKKRFDPFDIKVFKLDRFTSSAEKKQVLQNL
                     KENKACVVVGTHALLSVECENLALVIIDEEHKFGVKQKEKLKEITQNSHILSMSATPI
                     PRSLNQALSSIKSYSVLQTPPEDRMDVRTFVKENDDALLKEAIARELRRGGQIFYIHN
                     HIASIEQCKKHLLELFSTLRILILHSKIDAKMQEEEMLKFENKEYDLLLSTSIVESGI
                     DLPNANTIIVEKSDRFGMADLHQLRGRVGRSDKQGYCYFLIEDKNAITKDALKRLVSL
                     ESNSFLGAGSILAYHDLEIRGGGNLLGVDQSGHIEQIGYSLYLKMLEDELNALSKNEV
                     DQKENKLDLKLNVNAFLNSELISEDRLRLELYRRLSKCEQVHEVYEIEGEIEDRFGKL
                     DIYTKQFLSLITIKILALNKFKSISNYEQNIQFTALNDEKELIKAKSKDDDDILEAIL
                     THLRKA"
     gene            13728..14490
                     /locus_tag="RJ336_000756"
                     /pseudo
     CDS             13728..14490
                     /locus_tag="RJ336_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344477.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            14487..15173
                     /locus_tag="RJ336_000757"
     CDS             14487..15173
                     /locus_tag="RJ336_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HDZ5213217.1"
                     /translation="MTGAQIFIKLLNLDLNYHDFDWLENQGLSEFELLISVILTQNTN
                     WKNVLKALENLKKENIASLEQINTLSNLEFATLIKPSGFYNTKAKRLKGLVESIINTY
                     ENLENFKTNVSREWLLNIKGLGFESVDGILNYLCKREILVVDSYSLRLAFHLGYEFEN
                     YEELREFFQSGIESEQENLCKILGRKCELYELYQIFHALIVAFAKQSFKGQKLSPKGE
                     EWIKILKEEL"
     gene            15170..15982
                     /gene="thiD"
                     /locus_tag="RJ336_000758"
     CDS             15170..15982
                     /gene="thiD"
                     /locus_tag="RJ336_000758"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDZ5213218.1"
                     /translation="MKAKGSELIPVLTIAGSDCSGGAGIQADLKTFSAHNLFGMSVVL
                     SVVAENTARVISVHDIPTQSVDEQMLAVFEDIVPKATKIGMIGSCELMSCVAKNLSEF
                     KPQNIVIDPVMFAKNGYALMPQENCDFFKQTIVKFADILTPNIPEAEFLCGFKIANEE
                     QMIKAAKHLCSLGAKAVLLKGGHSEENANDVLYDGKEIYILKGERIETKNTHGTGCTL
                     SSAIASNLAKGKDLFYAVSEAKEYVRNAIYYSLNLGKGCGPTNHFFKFLDEK"
     gene            15972..16604
                     /gene="thiE"
                     /locus_tag="RJ336_000759"
     CDS             15972..16604
                     /gene="thiE"
                     /locus_tag="RJ336_000759"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDZ5213219.1"
                     /translation="MKNKLDLSLYLVASQGNKSEECFLNTLENAIKGGVSIIQLREKE
                     LNAREFYKLGLKVQKLCKAYKIPFLINDRVDIALALDADGVHLGQEDLEVKLARKLLG
                     DEKIIGLSLKKLEQLEFIQGANYLGCGAIKATPTKESSLLSLELLSQICDKSPIGVVA
                     IGGIDKEALDELKGINLSGVAVVRAIMDAKDAFLAAKELKRKIYENLPLK"
     gene            16582..17211
                     /locus_tag="RJ336_000760"
     CDS             16582..17211
                     /locus_tag="RJ336_000760"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDZ5213220.1"
                     /translation="MKIYLLNETPFEGVENLILNEIIFYDFSVDLSLYDALICTSKNA
                     LKALQNAKITLNFKLNLYAVGQSTAQYAKNLGFKKIKIPSKAYGKDLFLEFKEELKTQ
                     KCLYLRAKNIVSTLNLDLKNAGVDLDEMIVYENVFKKGDKKLTHPAIFIFTSPLSVEN
                     FLKFYSLKEEDKVVVIGQSTAKKLLNFKNLYICENQSLLECVKLAKTLV"
     gene            complement(17208..17660)
                     /locus_tag="RJ336_000761"
     CDS             complement(17208..17660)
                     /locus_tag="RJ336_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213221.1"
                     /translation="MKKAYVLIWTIFLILLISLWMSLTLNISSYTPKIIQDSYYYLQA
                     QILSHNATQFSKYFLYQAKQENKECLDNIYFNYAKALIKIKYFYPIVQCVNFKFSNFN
                     PDANLSKDGVIIAHISITLNRDKNVNDEILLTKSIIIYPKENFWNLKN"
     gene            complement(17657..18319)
                     /locus_tag="RJ336_000762"
     CDS             complement(17657..18319)
                     /locus_tag="RJ336_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213222.1"
                     /translation="MSKAFTLFELIISLILFTFITSLLSKPLMDFYHLNFTALHTNNL
                     ITQAHLNLLKIEKLIQNCINITFSQNTLKCLLKDELISLKDNKLYLINSALILENNHT
                     LYSPHSDFKTQLQNRKDLYNDNEHISYAYKINKIEKISILENGISTNFTGSFIPLQAQ
                     LVIKLQNEELIYEIKPKFNEQLNQQGLISKNISSFNLQNNKLKICLKRQTKYCLEKRI
                     LL"
     gene            complement(18316..18618)
                     /locus_tag="RJ336_000763"
     CDS             complement(18316..18618)
                     /locus_tag="RJ336_000763"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213223.1"
                     /translation="MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERL
                     YKLQEELYEKPIFKTIILQTSALKPIILQEQFVNDGIFQFQKLYFQDQNYSVYFKK"
     gene            complement(18615..19346)
                     /locus_tag="RJ336_000764"
     CDS             complement(18615..19346)
                     /locus_tag="RJ336_000764"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDZ5213224.1"
                     /translation="MLYILANGAMATALAYGLKDDYEICIVGRSIEKLQALTKEGFKT
                     LLYKDFNIEGKDVILAFKPYALENIAQILKGRARILISVLANVDFEKLQTIKAQNYVR
                     IMPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
                     FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTI
                     KGIKILEQKGIRGSFFEAINASSAK"
     gene            complement(19346..19735)
                     /gene="fliW"
                     /locus_tag="RJ336_000765"
     CDS             complement(19346..19735)
                     /gene="fliW"
                     /locus_tag="RJ336_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HDZ5213225.1"
                     /translation="MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLIN
                     PYLIRPDYEFDIPTYYQELLSLTPESNMKIFNIVAIAKSIEESTVNFLAPVVINLDNN
                     TMVQVILDTVNYPDFFQADQIANYIKK"
BASE COUNT         7196 a         2297 c         3550 g         6761 t
ORIGIN      
        1 ttggataaat ttttccaatc tttacttaaa agctttttag ggagtataac tatattctct
       61 ttgccatttg tagcatgata aacactaacc ccatatttac ttgcataaaa tttcattaag
      121 agttgctgga gtttgtattc gctgctatta ttaaaccaag cattgttgct tagggctata
      181 ataatttgtg aattttgata gttttgttct ttggtagctt cataacaaat tgcatttgtg
      241 ataatttgat tatctaattt atatttgctt tgtataggac ctttggaaaa ttcttcaata
      301 tttttaagaa aatatttttt tgttaagtct ttaaaaaatg gaatttcttc accaaaggga
      361 actaaaaaat gcttatttaa aatatagaca ttgccttttt taaagatata agtgctatta
      421 taagtatgct ctttttcaac atgaaatgct cctgtaataa tggtgatttt ataagataat
      481 tctttaagta taagctcgta tttggtattt tttaaatcaa aagcaaaagc ggtttcaggc
      541 aagattacaa gttctttttt ttcatttata gcttgaagta tatcttgaat taagatatca
      601 gaatttgatt ttaaattttc ttgtaaaaat ttttgatctt gagagatatt agtattgatg
      661 agtttatagt ttaaattaag agtttgagct tgtttttcat tatattgaaa tccactaaag
      721 aataaaataa gaacaatcgc tattttataa tatcttgata tataaccctc atagatgaaa
      781 tatgctatta aaaatatgca aataatacca cgataacttg ggtcaaaaaa accataaact
      841 gtaaaaattc cccaattaag ccaatcaaat cctaaaggat ggataaaact tatgcaaaaa
      901 attccacaaa gccttaaaaa atcaaatttt aataaataac ataatctaaa aagtagtcca
      961 taaataaaac caatgataat tggtataatt ggcactaaat agtttagatt aaaataaatt
     1021 gaagataaac caatccacca aaaccaaaga atccctacaa aaaaacctat ccaaaaatat
     1081 tgtttagaat ttttactttt taggagtaaa actaagcccc aaatagctaa aaatgggcta
     1141 atagtttgtg taaaaatatt ttcaaaaaat gatagataaa tagaatttga aagtaaaatt
     1201 gcaataaaaa agacttttat tattttaaaa atgatagaat tagtgtttaa tttttttgga
     1261 ataaaggaaa aatatggcag aaaattcaat tttaacttca ttgttacctc ttgtagtgtt
     1321 atttgcaatt ttttatttct tggtgatcag accgcaacaa aaacaagcaa aagcacataa
     1381 acaaatgctt gagtctttgc aaaaaggaga taaaatcatc actaatggcg gacttatttg
     1441 cgaagtcgta aaaccagagg aggattttat caaagttaag cttaatgaag acaatgttac
     1501 tgcaaaaatt tcaagagaat ttatagcaaa gaaaattgat gcgtaattct aaaatcaatt
     1561 atcgcttgat tatttttata gcggtattta tttttggagt ggctttttca ctcccttctt
     1621 ttttgcagtc agaacgtggt gcgaagatta atttagggct tgatttgcaa ggcgggcttt
     1681 atatgctctt aggtgtagat aatgaagaag ctgtaaaatc taaaataaaa tcaattgcat
     1741 cttcattgag ttattctttt aataaagaaa atattttaaa tgatggctta aatacccatg
     1801 atgatatttt agaatttact ttgcttgata atgcagatat tgcaaaagtt gaaaatttgc
     1861 ttaaagaaat aaaaggaatt aatatacaaa gtgaaaatat gcactataaa atttctttta
     1921 cctcagaaga agtaaaaaat atagaaaatt ttgcactttt gcaagcagtt gaaaccataa
     1981 gaaataggct tgatcaattt ggtttagcag agccaacagt tgctaaacaa ggtgatgata
     2041 agattttggt tgaacttgca gggattaaaa ccaaagaaga tgaactaaga gcaaaagagc
     2101 gcatcacaaa agcagcacat ttgcaactta tggaagttga tgattctaaa atgggtcaag
     2161 cttctacaat gagcgatgct gaggctgcga gttatggact gattttagtg tctgattcta
     2221 gaaatccaaa tttaaaatat accttaaaaa gcatacctat tttagatgga tctatgctta
     2281 ctgatgctag agtagggatt agtgataaga gtaattatcc tgtgattaat tttactttaa
     2341 atgccgaggg ttctaaaaaa tttgctgatt atacaggagc aaatgttgga aagcgtcttg
     2401 ctattgtact tgataataaa gtgtattctg ctccatctat caatgaacgc ataggcggag
     2461 gtagtgggca aatcagtgga gcttttaccc aagaagaagc gcgtgatgtg gcggtagctt
     2521 taagaagtgg agctttgctt gcgcctgtaa aattacttga acaaagaagt ataggaccat
     2581 ctttaggtgc tgatagtatt aaaatgagta tgatagcatt aatcggtgca tcggttttta
     2641 ttgtaatatt tatgatgatg tattacggtg tggcaggaat ttttgcaaat attgcaatgt
     2701 tggttaatgt tttggtagta gtggctgtta tggctatgtt tggagcaact ttaactttac
     2761 cagggatggc aggacttgtt ttaactgtgg gtatggcggt agatgcaaat gtgattatca
     2821 atgagcgcat acgagaactc ttgcgagatg gagtaaatat aagagctagt atagaacaag
     2881 gttataaaaa tgctatgagt gcgattatag attcaaatat cacttcttta gttacttcgg
     2941 tagcacttta tgcctatgga acaggagcag ttaaaggttt tgctgtgact ttgggaattg
     3001 gtattgtcgt ttctatgatt acagctattt taggaactca cggaatgttt gattatttta
     3061 tgcaacgcat agaaaaaagt aataatacaa gattttggtt tggttacagg agaagataat
     3121 gcagtttttt agcgaaaaga aaatttatga ttttatgaga atgcgttttg ctgctatttc
     3181 tctttctttt attttgtttt ttggttctat ttatttgctt tgggataggg gtttgcaata
     3241 tggtattgat tttagcggag gaactttagt tcagcttaaa tatgaaaatg cagctcctat
     3301 aacacaaatc cgagaaattt tagaaaaaca aggaactttt caaaatttat ctgtaactga
     3361 atttggaagc aatgaagaag taaccatacg ctttttagga agcaacgata atgtaagcaa
     3421 tgatataggc gagcatataa gcactctttt aaaggatacg ggaaaatttg aagtgcgtcg
     3481 tgctgatgtg gtaggtccaa aagtaggtga tgaacttaga aataaaggac ttatggctat
     3541 agctgtatct ttgatagcaa ttttaattta catagcgttg cgttttgagt ggcgttttgc
     3601 tcttgcggct ataatcagtg aaattcatga tgttgtgatt actttagggg caatttcttt
     3661 atttaaaatt gatgttaatt tagatacttt ggctgctgtt ttaactgtgc ttgggtactc
     3721 tttgaatgat acaattatta tttttgatag aatcagagaa ggcattaaaa ccagtaaaaa
     3781 aaccgaactt gcacctatta tcaatgaaag tgtttcagca actttatcaa gaacggtttt
     3841 aacttcaggg ttaactttag caaccgttgt gatactttat ttctttggcg gggaaatgat
     3901 acaaggattt tctttggctt taattgtagg tattatagcg ggaactttaa gctctatttt
     3961 tgttgcaagt ccgacattat tatggtttaa atttagtgtg cttgagttta gaaataaaga
     4021 aattgaaaaa gcaaaaagaa aacaagataa agaacgcaat cgtgcaatgt atgaaaaagg
     4081 aacagtgtaa ggagaattta tggcttatga agcaagttta atagaaaaaa aatggcaaaa
     4141 aatttgggat gaaaatgaat attttgagcc aaaagatgat ttaaatttgc ctaaaaaata
     4201 tattttatcg atgtttcctt atcctagcgg acgcattcac atggggcatg taagaaatta
     4261 tactataggt gatgctttag caagatatta tcgcaagata ggatttaatg ttttacatcc
     4321 tataggtttt gatagctttg gtatgcctgc tgaaaacgca gctattaaac ataaaattca
     4381 tcctaagtca tggacttatg aaaatatagc ttatatgaaa aaagaacttt tttctttagg
     4441 tttttctttt tctaaaaaaa gaatgcttgc tacttcagat ccactttata caaaatttga
     4501 gcaagaattt tttattaaga tgtttgaaaa aggtttgatt tacactaaag aagcaaatgt
     4561 gaattggtgt gagcaagatc aaacggtttt ggctaatgag caagttgaag acggaaaatg
     4621 ttggcgttgt ggtcatgaag tggtgcagaa aaaaatgcca ggttattatg taaaaatcac
     4681 tgcttatgct gaggaacttt taaaagattt agaagaatta aaagataaat ggcctaatca
     4741 agttttaact atgcaagaaa attggattgg taaaagcgaa ggtttggaat tttctttaaa
     4801 tttagacgaa gaaagcaagc aaaaaactaa agaaagttct ttagaagttt ttactacaag
     4861 agcagataca atttatggag tttcgtatat tgctttagct ccagaacata aaattgttca
     4921 aaatttgctt tcgcaaaatt tattaaatca agatgtatta aataaaatca aagctattca
     4981 aaatcaaagc ccaagagaaa gacaaagttc tgaaaaagaa ggttattttt taggaattta
     5041 tgccattcat cctttaagcg gagaaaaaat tcctttatgg gtggctaatt ttgtcttggc
     5101 tgattatggt agtggagcgg ttatggctgt tccagctcat gatgaaagag attttgaatt
     5161 tgcaacaaaa tataatcttg ccatcaaaca agttattcaa actcaagaaa atttacctta
     5221 tacgcaaaaa tcaggaaaat taatccatag tcaagaattt gataatcttg attgtaatga
     5281 ggcaagatta aaaattattt ctcagtttga agctaaaaat ataggaaaaa gggttgtaaa
     5341 ttttaaaatt cgtgattggg gtgtttcgcg tcaaagatat tggggtgcgc ctattcctat
     5401 gattaaatgt caaagctgtg gtatagtacc tcaaaaacta gaaaatttac ctattactct
     5461 gcctgaagat gtgcaaatta caggagaggg caatccactt gataaacatc caacttggaa
     5521 aaattgtatt tgtcccaaat gtggcaaaga ggctcaaaaa gaaagcgata ctttagatac
     5581 tttttttgaa agttcttggt attttgcacg ttttgcaagt gatgagaaaa cttggcagga
     5641 aaaagcttta gatgaaaaaa gtgtgaagta ttggatgagt gtggatcaat atataggtgg
     5701 tattgaacat gcaatcttgc atttacttta tgcgagattt ttccaaaaag ctttaagagg
     5761 cttgggttat ttaacgcaaa atgaaccttt tgatagactt ttaactcagg gtatggtgtt
     5821 aaaagatggt gctaaaatgt caaaatcaaa aggcaatgtt gtagatcctg atgagattat
     5881 agaaaaatac ggtgctgata ccgcaagact ttttatactt tttgctgcgc ctccggctaa
     5941 agagcttgaa tggaatgatg atgctgttga aggggcttat agatttattt gcaaacttta
     6001 tgatagggcg caaaatgtta aaaaaggtga gcttgtagaa ttaaaacaag aaaatttaaa
     6061 caaagaagaa aaatatgcaa gattaaaggt atatgaagct ttgaaaaaat cttttgaagt
     6121 ttatcatcaa agttttgctt tcaatacttt aattgcagct tgcatggaag ctttaaatgc
     6181 tttagcgctt tgtaaaaacg aagctttgga gcaagaggct ttttatatta ttttaaatat
     6241 tttagagcct attattcctc atgtttgttt tgagcttagc gaggagcttt ttaaatgtaa
     6301 aaatttcaaa aaattagaac ttaaagaaga gatttttgta aaagatactt taaatttagc
     6361 tgtaagtatt aatggtaaaa aaagggctga atttgaaatt tcaagtagtg cgagcaaaga
     6421 agaaatttta gcttttgcaa aagaaaatac tgctaaatgg cttgaaggta agagtatagt
     6481 taaagaaatt tatgtggaag gaaagctagt taatctagtg attaaatgaa aaagatttta
     6541 attttttgta taggtttatt tttaggtgct tgtggatatg ttcctacatc aaaaatcgct
     6601 aataatattt tcgatgagaa ggtttatgtt aatgttgaat taagtcaaca agacccaaaa
     6661 aatagtatct atgttgccga tactttaaaa gaaatggtaa tttcaaaatt agggcgtaaa
     6721 cttgctttaa aacacgaggc agatgatgta attaatgtta aaatgaataa tttagaattt
     6781 attcctttag cttatgataa aaatggctat gttattagtt ataaagctaa attaaattta
     6841 gattttaatg ttgtctttaa agatggttca agtcaggctt ttagtacaag tggaagttat
     6901 aattttgaaa tttctccaaa tagtattatt agtgattctg caaggtatga ggctattcga
     6961 gcagcttcaa gcgaggcatt tgatgagttt atttccgtaa ttgctattaa agggcaaaaa
     7021 cgtgattcca aatactaatg aaatagcaaa gcaaacttta attgcattaa aagaaagaaa
     7081 actaaaacca actcctgaaa attatacgga aatttttgaa gaattatctt taaaatatgg
     7141 tatcacaagc tcaaataaag ctaaacttga caaatacaaa accttgcttt taccgattta
     7201 tcaacaagaa ttaaattcta aaactataag aagtttagaa gaactaatta gttttttaat
     7261 ttctgtttta aatagacaaa gcggaaaaca atttagtgaa ttttttgatt ttttatatac
     7321 tatatctaaa actttgcaaa taagtaagga taaaaagata agagatttgg ctaaggtgac
     7381 ttcgattaga atttctaaaa ctatggatag tgaaagtatt tacttgctta ctaaaaaatg
     7441 gaaagagctt gaaagaaatt acgatgaaaa tgacttagaa gaacaagctc gtaaatatgg
     7501 cattagtaaa tatgatgatt atgatagcgt gattaaaaaa ctcttagtta aacttgaaga
     7561 gcgtagttat gagcacttta gtgaattatt atgcttgggt ttaaatcctt cattggtgga
     7621 agatttaaaa attcaaggtt ttatacaaaa tttaacacaa aagccttttg tgataggtga
     7681 agaaaatttt aaaaatgaac taatggaatt tataaatcat cgtataatgg ttgataatat
     7741 gtatgtccaa aaaaatttaa atttttttaa tgataatcta aaaaaaatct atgaattgct
     7801 tgtcttactt aataaatcga atgaaaaaaa tatggatttt atcaatactt taaaaccaga
     7861 tgaaaatggg gaagtaaaac ttagttttga ggatttaaaa ctaaaattta aacaacttgg
     7921 agaaaaaatt acatctttaa ataatcaaat tgaattcacg caaagcttgg aggagagaga
     7981 ggcttggagt gttcttaaag agcttgataa aatggatgaa aattttaata agtataaagt
     8041 taattattct ttagctttat tttctatagt aaattaccgt ttcattatgg aaaaatacgg
     8101 catgggaagt ttgaatgaaa tttttgttcg atttaaaaaa attttaaaag attcttgtag
     8161 cgaatttgat gaactgtgga tgatagatga aaagagttat ttgattgttt cgccaggaaa
     8221 aagcaaagat gaaattacac agcttgtaaa tacaaatctt aaaactatag aaaattttag
     8281 atttatttat aagcaagata ttataactcc taaaattcac gtggcttatc ttgataagca
     8341 aagtaagcca agtattaata ttttagatga gttaataaag caaattgcag cggttaatga
     8401 acaacataat gaaagttgag aattttttag ctcaaaaaag tataaattac gataaaattg
     8461 atcgtttttt gatgtttaga atgtatgaaa aatataagaa atattttaaa aatattccta
     8521 taattcaact tataggcaca aatggtaaag gtagcacggg tagatattta acccaacttt
     8581 tagaaaattt aaattataaa atagggcatt atactagccc gcacattttc agttttaatg
     8641 aaagatttta tcttgatggt aagattgcga atgatgaaga attagaacaa gctcatataa
     8701 gacttgaaga aatttttaaa caagacttgc aaaaattaag ttatttcgaa tatgctactt
     8761 ttttagctat gattttattt caaaaatgcg atttcattgt tttagaagca ggagtgggtg
     8821 gagaatatga tgctacttct gtttttgaaa gaagaatgaa tatttttaca agaattggat
     8881 ttgaccatat tcaaattttg ggcaattctt tagaagatat tgcaagaacc aagcttaaag
     8941 ttatggcgcc tgtagcactt ataagtgatg agcaagagca aaatgtttta aatttagcaa
     9001 aaaaaattgc ttttttaaaa aaagctaatt tgcaagtttc ttccttaaat ccttttttga
     9061 aagaaaaatt tgagatttat tgtaaaaagt ttgttttacc ttgtttttta aagcataatt
     9121 taaagcttgc attaaaggct tgtgaaattt taacttcgca agaaaaaacc ttagaagctt
     9181 taaaaaagtt acaagggtta aatttacaag gaagatgcca agaaatttct ccaaattttt
     9241 ttgttgatgt gggtcataat cccatggctg ctaaggctat gcttgataaa tttcaaggag
     9301 agaaaataaa tcttatttat aatgcttatt tggataagga tatttttcaa attttaaata
     9361 cattaaagcc tattattgat acaatacaaa tatataaata taaaagtgca gaacgaaagc
     9421 tggctgatga tgaaatttat agtattgcat caaagctagg catacaatgc aaagaatttg
     9481 taaaattaga agagaataaa aaaaatctag tttttggttc ttttatgctg gtagaaaatt
     9541 ttttaaagga gtggtgtggt aaaaaataaa ttcactatta ccattacaga tattaacggt
     9601 tcaagacatt tttatttaaa tcaaataatc aaaaaaatag ttttttatac tattgctttt
     9661 attgttttat ttttagtttt tagtggtttt tatatcaaat atctcgatag caaacttagc
     9721 gatatcagtg aaaagcgtga ggagcttttg aaaaaaagca aagaattgga attatctaat
     9781 tcgcaaatgc aaaaaagcat agaagaaaaa actcagcagt atgcagctat agaagataaa
     9841 atagcttctt ttgaagaggc tttgggctta gaagcagaaa ataatcttac aattagtgca
     9901 agacttgata atcttcagct taccaatgag cagcaacttg gaattttggg acaaattcct
     9961 aatggatggc ctattgaaaa taaaggcatt acaggaaatt ttggctggag agagcatccg
    10021 cttttaaaaa gaagggaatt tcatcctggt attgatttaa gagcagaaat tggtacccct
    10081 atttatgcac cagcaagtgg agtagtggaa ttttcaggtt atagtgataa tggctatggc
    10141 tataatgtaa ttttattgca taattttggt tttaaaacag tatttgctca tatgatgcgc
    10201 aaagaagtgg tcaaagcagg tcaatttgtt aataaagggc agttgatagg ttatagtggc
    10261 aatacaggtc tttctacggg gccgcatttg cactatgagg taaggtttat taataaaact
    10321 ttagaacctt tgtatttttt aaatttgcaa agaaaaaata tgaatgattt ttttaatcaa
    10381 gaaaggagag ttccatggca atctttaata aaggcggtat cagcccaaca tccagctcta
    10441 gctcagaaac aacagtaatt tcttcaggtg cgagaattga gggtaaattt tattttgctt
    10501 ctatgctcca tgttgatgga gagttaagtg gtattattca ttctgaaagc attgtggtta
    10561 tcggaaaaaa tggaaattta aaaggtgaat tacaagcaga taaaattgta gtaaatgggt
    10621 gttttgaagg gcaacttgag gctaatagtt tagaaatttt agcgggcgga gttgttaatg
    10681 gtgatatttc aacgcaaaaa atttctatag aaaatggcgg tcgctttaat ggaactagta
    10741 aaattaaaga agatactatc aaacttattg aaaataacaa cgaagaataa tgcaagcttc
    10801 attttatgaa tacttacaaa atccaaaaat ttgtgaactt tttctttgta aagatgaaaa
    10861 acaagcagat ttactcgctc aagtttcacg atttaagggt ttaaaaacct ttgttttacc
    10921 tgattttaga gcgcagtttg gagatgattt aagggctttt tctaaagaac tttttgatct
    10981 ttgtaagatt ttaaatgctt atcataaaga agaagaaaaa aaaatcctta tttctccttt
    11041 aaatactgtt ttaaaaaaac ttccttcaaa aaaacattta caaaattatc atatcgataa
    11101 aaaacaaaat tttgatttga aatgttttga agatgaaatt tcaagattgg gatacgaatt
    11161 tgtagatata gttcaggata aaggtgaaat ttcaattcgt gcggatatta ttgatatttt
    11221 ttgtatcaat gaagaaaatc ctattagaat tttacttttt ggcgaagaga ttgaaagtat
    11281 aagatatttt gatttgcaaa gtcaaaagtc tattcctaac gaactagaac attttgaaat
    11341 ttgtcctttt ttaaaatatt ttgacaaaga aaattatgaa atttttaagg acaaattaga
    11401 agattttcaa agcgatactt taatacatga tatcaattct ttaggctttt ggtgtattga
    11461 tgattttttt gattatttag aacttgattt tttagcttgt gaaaagtttg atattaatga
    11521 atatgaaaaa gatataagtt ttgtgaatgc aaaaatttta cctcaagcta aaaaatttaa
    11581 agaattgcaa agttcttaca ataaagattt ttttgaattt cataaaaata aaaaaatcac
    11641 acttttagct aaaaacgaag ctttatttaa agctttagag cttgaagata ctcaaaatat
    11701 ccattttgta aaaagtgatt taaggcttaa tcttattagt cctgaagagc taattatttc
    11761 tttaaatcaa aaagaaaaac aaaaaacaag aaaaaaagct agtttgatta tagatgagct
    11821 taaaaatggg gattatatag tacacgaaga ttatggggta ggtaaatttt taggtcttga
    11881 gatgatagtg ataagcggag caaaaaaaga gtttgttgct atagagtatc aaaattctga
    11941 taagctttta ttaccagtgg aaaatcttta tttgattgat aaatatttgg gcgtgagtgg
    12001 atctattcca agcttagata aactaggtaa aacaagcttt attaaactta aagaaaaatt
    12061 aaagactaaa cttttagcca tagcttctga aattgttatt atggcggcta aaagatcttt
    12121 ggtgcaagca aaaaaaatta cagtggattt aaatagacag actgatttta tagctagtgc
    12181 gggttttatt tatacaagcg atcaagataa agcctgttat gaaattttgc aagattttca
    12241 aagtggaaaa gtcatggata ggcttttaag cggtgatgtg ggttttggaa aaacagaagt
    12301 cgctatgaat gctatttatc cagtagttaa aagtggattt tgcgcatttt tatttgcgcc
    12361 tacgactttg ctttctcatc agcattataa aaccttaaaa aagcgttttg atccttttga
    12421 tataaaggtt tttaaactgg atcgctttac aagtagtgca gaaaaaaaac aagttttaca
    12481 aaatttaaaa gaaaataaag cttgtgtagt tgtaggaact catgcacttt taagtgtaga
    12541 atgtgaaaat ttagcccttg ttattattga tgaagagcat aaatttggag tgaagcaaaa
    12601 agaaaagctt aaagaaatca ctcaaaattc acatatttta tccatgtcag caacccctat
    12661 accaagaagc ttaaatcaag ctttaagttc tataaaatct tatagtgttt tgcaaactcc
    12721 accagaagat agaatggatg taagaacttt tgtcaaagaa aatgatgacg cacttttaaa
    12781 agaagctata gcaagagagt taagacgtgg tgggcaaatt ttttatattc ataatcatat
    12841 tgcaagtata gagcaatgta aaaagcattt attagaactt ttttctactt tgcgtatttt
    12901 gattttacat tctaaaatcg atgccaagat gcaagaagaa gaaatgttga aatttgaaaa
    12961 caaagaatat gatttgcttt taagtacctc tatcgtagaa agtgggattg atttaccaaa
    13021 tgcaaatact atcatagtag aaaaaagcga tcgttttggc atggctgatt tgcatcaatt
    13081 gcgtgggcgt gtaggaagaa gtgataagca aggttattgt tattttttaa ttgaagataa
    13141 aaatgctatt acaaaagatg ctttaaagcg tctagtttcc ttagaaagta attctttttt
    13201 aggcgcaggt tctattttgg cttatcatga tcttgaaatt cgtggcggtg gaaatttatt
    13261 aggcgtagat caaagtggac atattgagca aattggatat agtttatatc ttaaaatgtt
    13321 agaagatgaa cttaatgctt taagtaaaaa tgaagtggat caaaaagaaa ataaacttga
    13381 tttaaaactc aatgttaatg cctttttaaa cagcgaactt atcagcgaag atcgcttaag
    13441 attagaactt tatagaagac ttagcaagtg tgagcaagtt catgaggttt atgagatcga
    13501 aggtgaaatt gaagatcgct ttggaaaact tgacatttat actaagcaat ttttatcttt
    13561 gattactatt aaaattttag ctttaaataa atttaaaagc attagtaact atgagcaaaa
    13621 tattcaattt actgctttaa atgatgaaaa agaactcatc aaggcaaaaa gcaaagatga
    13681 tgatgatatt ttagaggcaa ttttaacgca tttaagaaag gcttaaaatg gattggaata
    13741 aaacttatgc agcaatttat agagcaagaa aagattattt aaagcctatt tttgaaatcg
    13801 atcctattgc tttaaaagat ttagtaggta tggaaagtca aaaaaaagca ctttatgaaa
    13861 atactttaaa tttcattcaa gataagggag caaatcacgc acttttatgg ggatctaagg
    13921 gcactggaaa atcaagttta attaaagcta tatttaatga atttaaagaa cagggcttaa
    13981 gacttgtcga attaaataaa gaagatttat ttgccttagc agatatcatc gatgaaatca
    14041 gattagaaaa ttttaaattc atactttttt gtgatgattt ttcttttgag aagggagatg
    14101 atagttataa atttttaaaa cctttgctcg aaggaagcat agaaaaagcc ccaaataatg
    14161 taattattta tgcgagttca aatcgtaggc atttattaag tgaaagcatt gctgataatc
    14221 ttgatacgca aatcacacat acagaacttc atttaagcga tgctgccgaa gaaagattaa
    14281 gcttgagtga tagatttggt ttgtggttaa gtttttatca aggaaattta gaagagtatt
    14341 taaagatgat agatttttat tttaaagatt attcttgcga taaagagctt ttacacgcta
    14401 aagctaaaga atttgccacc ttaagagcaa gtagaagtgg tcgttactgc aaagcaattt
    14461 tatttggctt ttaaggagaa ttttaaatga ctggagcgca aatttttatc aagcttttaa
    14521 atttagattt aaattatcat gattttgatt ggcttgaaaa tcaaggattg agtgaatttg
    14581 agcttttaat ttctgtcatt ttaactcaaa atacaaattg gaaaaatgtc ttaaaagctt
    14641 tagaaaattt aaaaaaagaa aatattgcaa gcttagaaca aatcaatact ttatccaatt
    14701 tagaatttgc aactttaatc aagcctagcg gattttataa taccaaagcc aagcgtttaa
    14761 aaggcttagt agaaagtatc ataaacactt atgaaaattt agaaaatttt aaaacaaatg
    14821 taagcagaga atggctttta aatatcaaag gtttgggttt tgaaagtgtt gatgggatat
    14881 taaattatct ttgcaaaaga gagattttgg ttgtagatag ttatagtttg cgtttggctt
    14941 ttcacttagg ctatgagttt gaaaattatg aagaattaag agaatttttt caaagtggta
    15001 tagagagtga gcaagaaaat ttgtgtaaaa ttttagggag aaaatgtgaa ctttacgaac
    15061 tttatcaaat ttttcatgct ttgattgtag cttttgcaaa acagagtttt aaaggacaaa
    15121 aattaagccc taagggtgaa gaatggatca aaattttaaa ggaagaatta tgaaagcaaa
    15181 aggaagcgaa cttatacctg ttttaactat agcaggaagt gattgtagtg gtggagcagg
    15241 gatacaagcc gatcttaaaa cctttagtgc gcacaatctt tttggtatga gtgtggtttt
    15301 aagtgtggta gctgaaaata ccgcaagggt gatttctgta cacgatatac ctactcaaag
    15361 cgtagatgaa caaatgcttg ccgtgtttga agatatagtg ccaaaggcaa ctaaaatcgg
    15421 aatgataggt tcttgtgaat taatgagctg tgtagctaaa aatttaagcg agtttaaacc
    15481 tcaaaatata gtgattgatc ctgtaatgtt tgctaaaaat ggttatgctt taatgccgca
    15541 agaaaattgt gattttttca aacaaaccat agtaaaattt gcagatattc ttacgcctaa
    15601 tattcctgaa gcagagtttt tatgcggttt taagatcgct aatgaagagc agatgataaa
    15661 ggcagctaaa catttatgca gcttgggggc taaggcagtt ttacttaaag gcggacatag
    15721 tgaagaaaat gccaatgatg tgctttatga tggaaaagaa atttatattt taaaaggcga
    15781 acgcatagaa actaaaaata ctcacggtac aggttgtacg ctttcttcgg ctattgctag
    15841 taatttagct aaaggcaagg atttatttta tgctgttagt gaggctaaag aatatgtaag
    15901 aaatgcgatt tattattcac tcaatcttgg aaaaggttgt ggtcctacaa atcatttttt
    15961 caagttttta gatgaaaaat aaattagatc ttagccttta tttagttgct tctcagggaa
    16021 ataaaagcga ggagtgtttt ttaaatactt tagaaaatgc tataaaaggt ggagtaagta
    16081 tcatacaact tcgtgaaaaa gaacttaatg caagagaatt ttataaacta ggtttaaagg
    16141 tacaaaaact ttgcaaggcc tataaaatac cttttttgat taacgataga gtggacatag
    16201 ctttagcctt agatgctgat ggggtgcatt tagggcagga agatttagaa gtaaaactag
    16261 ctagaaagct tttaggagat gaaaaaatca taggcttaag ccttaaaaaa ctagaacaac
    16321 ttgagttcat acaaggagca aattatctag gttgtggagc cattaaggca acgcctacta
    16381 aagaaagttc gcttttaagc cttgagcttt taagtcaaat ttgtgataaa agccctatag
    16441 gggttgtagc cataggtggg attgacaaag aagcacttga tgagttaaag ggtataaatt
    16501 taagcggtgt ggctgtggtt agggcgatca tggatgctaa agatgctttt ttggcagcta
    16561 aagagctaaa gcgtaaaatc tatgaaaatt tacctcttaa atgaaactcc ttttgaaggg
    16621 gtggaaaatc ttattttaaa tgagattatt ttttacgatt ttagtgtgga tttaagttta
    16681 tatgatgctt taatctgcac ttcaaaaaat gctttaaaag ccttacaaaa tgcaaaaatc
    16741 actttaaatt ttaaactcaa tttatacgct gtaggacaaa gtacagctca atacgctaaa
    16801 aatttaggtt ttaaaaagat taaaattcca tcaaaggctt atggaaaaga tctttttctt
    16861 gaatttaaag aggaattaaa aacgcaaaaa tgtttatatt taagggctaa aaatattgtt
    16921 tcaactttaa atttggatct taaaaatgca ggtgtggatt tagatgaaat gattgtttat
    16981 gaaaatgttt ttaaaaaagg tgacaaaaaa cttactcatc ctgctatttt tatatttacc
    17041 tctcctttaa gtgtagaaaa ttttttaaaa ttttatagct taaaagaaga agataaggtt
    17101 gtagttatag ggcaaagcac agcaaagaag cttttaaatt ttaaaaatct ttatatatgc
    17161 gaaaatcaaa gtcttttaga gtgtgttaag cttgctaaga ctttggttta attttttaaa
    17221 ttccaaaaat tttctttggg ataaatgata atgctttttg tgagtaaaat ttcatcattg
    17281 acatttttat cacgatttaa agtaatgcta atgtgggcta taataacacc atctttgctt
    17341 aaatttgcat cgggattgaa gttggaaaat ttaaaattaa cacattgtac aataggataa
    17401 aagtatttta ttttaatcaa agcttttgcg taattaaaat atatattatc taaacattct
    17461 ttattttctt gctttgcttg atataaaaaa tatttagaaa attgtgttgc attgtgactt
    17521 aaaatttgag cttgaaggta gtaataacta tcttggatta tttttggagt gtagctagat
    17581 atgtttaagg tcaagctcat ccatagactt attagtagta ttaaaaaaat tgtccaaatt
    17641 aaaacataag cttttttcat agtaaaattc ttttttcaag gcaatatttt gtttgtcttt
    17701 ttaggcaaat ttttaattta ttgttttgca ggttaaatga gcttatgttt ttagaaatta
    17761 atccttgttg gtttaattgt tcattaaatt ttggctttat ttcatatata agttcttcat
    17821 tttgcaattt gataactaat tgagcttgca aaggaataaa actacctgta aaatttgtag
    17881 atataccatt ttctaagatg gatatttttt caatcttatt aattttataa gcatagctaa
    17941 tatgctcatt gtcattatat aaatcttttc tattttggag ttgtgtttta aaatcagaat
    18001 gaggtgaata aagtgtatga ttattttcta aaataagagc agaattaata agataaagtt
    18061 tattatcttt taggctaatt aactcatctt ttaaaagaca ttttaatgta ttttgtgaaa
    18121 atgtaatatt aatacaattt tgtattaatt tttctatttt aagcaagttt aaatgtgctt
    18181 gagtgataag attgtttgta tgtaaagcag tgaaatttaa atgataaaaa tccattaaag
    18241 gttttgaaag taagctagtt ataaaagtaa aaagtattag tgatattata agttcaaaaa
    18301 gtgtaaaagc tttgctcatt ttttaaaata aacgctataa ttttgatctt gaaagtataa
    18361 tttttgaaat tgaaatatac catcattaac aaactgttct tgtaaaatta taggttttaa
    18421 ggctgaagtt tgaagtatga tggttttaaa aatgggcttt tcatataatt cttcttgaag
    18481 tttatagagt ctttcaaaaa tatttaaatt ttcatagttt ttgtaaagtt gagtatagta
    18541 ataaaaaatg ccaatgaaaa ttaaagatat gatcgttata gcactaatac tttctataag
    18601 tatgaaagcc tttttcattt agcgctgcta gcatttatgg cttcaaaaaa acttccgcga
    18661 attccttttt gttcgagtat ttttatgcct tttattgtaa ctccgccagg ggagcaaata
    18721 ttttctttga taatagctgg atgttcatgt tctagtaaag cactagagct tttaaataaa
    18781 gagcgcgtaa gattgagact aagttctttt gacaaacctt cataaactcc agcattagca
    18841 atactttctg ctataagtgc taaaaaagca ggagcgcagc cgctaatcgc catagctgca
    18901 ttcatttgta tttcattatc taatttataa gctgaaccaa aagtttttaa aatgtctaaa
    18961 atttcatttt caaaatgaga gtttttaagt atatatggtg tagttgaagc cttatattta
    19021 gctgctgtat taggcattat tctaacataa ttttgagctt tgatggtttg tagtttttca
    19081 aaatcaacat tggctaaaac agagattaag atgcgtgctc gtccttttag tatttgggca
    19141 atattttcta aagcataagg tttgaaagcc aaaataacat ctttaccttc tatgttaaaa
    19201 tctttgtaaa gtaaggtttt aaagccttct ttggtgaggg cttgaagttt ttctatactt
    19261 cttcctacta tacaaatttc ataatcatct tttaatccat aggctaaggc tgttgccata
    19321 gctccatttg caagtatata gagcattatt ttttaatata attagcaatt tgatcagctt
    19381 gaaaaaagtc cggataatta actgtatcta gtatcacttg taccatagta ttattatcaa
    19441 gattaatgac tactggagct agaaaattca ctgtcgattc ttcaatgctt tttgctatgg
    19501 ctactatatt aaaaattttc atattagatt caggtgttaa agaaagaagc tcttgataat
    19561 aagttggtat atcaaattca taatcaggtc taatcaaata aggattaatt aaaacaaaag
    19621 aaaagtcttt accatcaaga cttttaagtc ttacaaatac ttcatcgata gttgaaaatt
    19681 ccatattttt ggtttcttca aaacctaaga tagggcattt aacagctagg gtcatgtttt
    19741 ctcctcaagt tataatgttt aatattttaa cataaaataa gcaataatca ttccaaaatt
    19801 ttaa
//
LOCUS       DAPWGO010000024        19580 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.025, whole genome shotgun sequence.
ACCESSION   DAPWGO010000024 DAPWGO010000000
VERSION     DAPWGO010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19580
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.025"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            148..1524
                     /locus_tag="RJ336_000766"
     CDS             148..1524
                     /locus_tag="RJ336_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HDZ5213226.1"
                     /translation="METLSQTLAERKPPLYKRIIKSLGFWVIIGIIAGIVLGYIDKEL
                     AIASKPGVDYFIGALKVLIGPIIFVTLVLGIISLESLKKVGSIGAKAVIYFEVVSTLA
                     LAIGIFMANVMQPGHGMNLDPSQLDTKSVQKYISQTTEVSASSEIMHILKDAMPTDII
                     TPFTEGKTIQVLVIAIITALIISLMRIEDKQAIQRVFEVAQNFVFKILQIIMYFSPIA
                     AFSAMAVLIAQYGIGSLINLAYLLLVMLISCLVFIFGILGLICYFAKVNIFKFMRFIS
                     REVLIVFATSSSESALAPLMRKLEKAGLSKATVGLVLPTGYSFNLDCTNIYLAMSLIF
                     LAQAFNVNLSLAHEISILIVLMIASKGAVGVTGSGFIVLGSTLAALGNMEISEANATL
                     AQVLPVTAIGILLGVDKFMSEMRAVGNLCGNSVAALIVAIWDKQIDWEKFRYAMDNPE
                     KFHNAGMN"
     gene            complement(1521..2327)
                     /locus_tag="RJ336_000767"
     CDS             complement(1521..2327)
                     /locus_tag="RJ336_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter beta-barrel
                     domain-containing protein"
                     /protein_id="HDZ5213227.1"
                     /translation="MRGIFYIIALFSLLNADELTEALAKNNNQNSWEHFDYENTKEAP
                     KIQEENVDFKSTFDSLLSKTLENNNGIDKTDGNLDFQNENAQVKNLSSLYEGENNSLL
                     FQKELFVAQDNYNYSWGLINRYEKDDFLFGVNGFIDKQKEQKDTKSFGTEFGYSKFIK
                     AYSNYYIPNEAEKNLQLGMSFVIPTYTAFAFDISKDNDKTNYQVSYSPYSVFSLNLLR
                     RDYSARETVDDTVVQVGFSFNFNESFLKQFRKKDNTLEEVNRYDFLQRTH"
     gene            2469..3995
                     /locus_tag="RJ336_000768"
     CDS             2469..3995
                     /locus_tag="RJ336_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDZ5213228.1"
                     /translation="MQKDNLIAFVIFIISTIAFVIWGFGYISQHQLILFILASIFGIF
                     MAFNIGGNDVANSFGTSVGAKTVTIKQALIIAAVFELSGAIFAGAEVTKTIRSGIVIF
                     PNSLDPMLFVIIMLAALLSSGVWIFIATKKGLPVSTTHSIVGGIVGASIMMGLLKFDG
                     IQTLSMVKWSEILRIAISWIASPLLGGIVAYIIYSYIDKKILKPSEKLNDDLKNIKKE
                     RKKFKEEYFLNLKTKSQEEQIKELSAIALDEEEQENNFYRNKMKEFKDQEKDIDIYSI
                     LKTHMPIIACIAAAIISAMFLFKGLNNVSTLNILQNFWIIGIIGTISYVVTFAIVKIV
                     KKTELNKTTDRIFSWFQIFTASSFAFSHGANDIANAIGPFAAILDVLKNGTINATSPV
                     PFAALAMFGVALVVGLWFLGKEVITTVGSKLATIRSTTGFSAELGASIVILLATQFGI
                     PVSSTHILIGAILGIGVYNKNANWIMMKPIGLAWIITLPAAGIMAALVFLGFKLSLGI
                     "
     gene            complement(3992..5170)
                     /locus_tag="RJ336_000769"
     CDS             complement(3992..5170)
                     /locus_tag="RJ336_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDZ5213229.1"
                     /translation="MIIKNAKIYGDSLQDIEIKEGKITNIGSNLQGEEILDAKGMTLL
                     PSFVDLCVSLKNDKFSLANLELLENECLKGGISSIVLRDCMDFDEESFALFLQNLAQR
                     KMQIFSSVRVKDANGKLKNLATLLNKGACALELDSSLDANTLKVSSQYAFMKDSPIFV
                     RCYDKDFDDNGVMNDCEMSFELGLIGMSKIAETSQIAKMKELAKFYKNKVIFDLLSLK
                     DSLVLLDEKDLKLVSIHHLIKDDSACEDFNTAAKLMPPLRSKEDVLALREALKEGKIS
                     FLTSLHSAKSISLKDLAFDEAAFGIHSVCEFISLCYTFLIKEGFLNWQELCRFTSKNP
                     SEFLGLNSGVIEVGKEANLVLFDENEEIFAPKSSLYSEDKLFGKIKMHIIKGKNILET
                     "
     gene            complement(5180..6076)
                     /locus_tag="RJ336_000770"
     CDS             complement(5180..6076)
                     /locus_tag="RJ336_000770"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDZ5213230.1"
                     /translation="MMRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKE
                     ALECEYLVFALSSQGMRAWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKEN
                     FCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGA
                     YKNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGAKEETFLGLSGAGDLFL
                     TATSVLSRNYRVGLKLAQNQKLDSILVELNEVAEGVKTAYAIEKLAKMKGIYTPIVNE
                     VVAIFKGKSVQEATQSLLKQND"
     gene            complement(6073..7491)
                     /gene="gatB"
                     /locus_tag="RJ336_000771"
     CDS             complement(6073..7491)
                     /gene="gatB"
                     /locus_tag="RJ336_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HDZ5213231.1"
                     /translation="MFEVVIGLEVHTQLNTKTKIFCSCATSFGEAPNTNVCPTCLALP
                     GALPVLNEEAVKKAIAFGKAVNATINKKSVFNRKNYFYPDLPKAYQISQFDIPIVEKG
                     ELFINVKGENKRIGITRAHLEEDAGKNIHENNFSKVDLNRAGTPLLEIVSEPELRSSD
                     EAVAYLKKLHSIIRFLDISDANMQEGSFRCDANVSIRPKGDTKLYTRVEIKNLNSFRF
                     IQKAIEYEVKRQSEAWEDGTYEQEVVQETRLFDTTNLVTRSMRGKEEAAEYRYFPDPD
                     LLPVLLKDEFLDIKIPELPDEKKARFIDELGIKESDAEVLISSLEMSRFFESLISQNL
                     NSKLCVNWLNTELMGLLKGELTIENSPVDAQKLGVLIKRIEDGTISAKAAKDVLAFVF
                     ENTSVEIDEAIEKLGLKQVSDDSAIEAVIEQILNANADKVAEYKSGKDKLFGFFVGQT
                     MKEGKGAFNPAKVNEILKTKLG"
     gene            7606..8100
                     /gene="luxS"
                     /locus_tag="RJ336_000772"
     CDS             7606..8100
                     /gene="luxS"
                     /locus_tag="RJ336_000772"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDZ5213232.1"
                     /translation="MPLLDSFKVDHTKMPAPAVRLAKVMKTPKGDDISVFDLRFCIPN
                     KDIMSEKGTHTLEHLFAGFMRDHLNSNSVEIIDISPMGCRTGFYMSLIGTPDEKSVAK
                     AWEEAMKDVLSVSDQSKIPELNIYQCGTCAMHSLDEAKQIAQKVLNLGISIMNNKELK
                     LENA"
     gene            8413..9404
                     /locus_tag="RJ336_000773"
                     /pseudo
     CDS             8413..9404
                     /locus_tag="RJ336_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344590.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="isopenicillin N synthase family oxygenase"
     gene            9415..10185
                     /locus_tag="RJ336_000774"
     CDS             9415..10185
                     /locus_tag="RJ336_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDZ5213233.1"
                     /translation="MTLFTKAFCVATLFTSFAWANEELKVGSSITPHADILRFIKSAL
                     QKQGYDLKIYEFNDGVIPNVMVENGELDANYFQHEPYLKEFNQRQGTHLVKVASIHIE
                     PMAVYSKKHKKFNPEEGQSISIPNNPTNESRALRIVASKGLIEVKDNELITPLDITKN
                     PKKLKFVELKDAQLTRSLDDVDYSLINSNFAILAGLNPVKDGLYTESKYSEYGNIIAV
                     KEGNENLPKIKALVKALQSDEVKKFIEEKYQGALIPTF"
     gene            10197..12461
                     /gene="metE"
                     /locus_tag="RJ336_000775"
     CDS             10197..12461
                     /gene="metE"
                     /locus_tag="RJ336_000775"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDZ5213234.1"
                     /translation="MKNSIISYPRIGANRELKFAIEKYFKNQSSKEELLKSAKDLRIR
                     HWQEIQKAGIDFIPSNDFSLYDNVLDAAVLFNIVHTKYKNLNLDALDEYFAQSRGYQG
                     ENGDVTALAMKKWFNTNYHYLVPECDNADIIALTGDKIFKEYLEAKELGIESKPVLIG
                     IFTLFKLIAFKDEKTQKLAKEKLLNAYIELFDKLNELKVTWLELDEPYLVYDLSKEDI
                     ALFEEFYQELLNHKKDLKILLQSYFGDLRDIYPKLLESKFDALGLDFIEGKQSLALIQ
                     KYGFAKDKILFAGLINGKNIYANDYAKSLKLIKELQKYTQNIVLNTSCSLLHVPYSTE
                     FESKLDSSYLKLFAFAKEKLQELKDLKEILNSSEENPLFRANQELFKNIPERLDEKVK
                     ARLKALKKEDFTRTPSFKERALIQKEFLKLPLLPTTTIGSFPQSADVRSNRLAFKQEK
                     ISAQNYTEFNQQKIKECIQIQEEIGLDVLVHGEFERNDMVEYFGENLKGFLFTQNGWV
                     QSYGTRCVKPPVIWGDVSRTKPITLAWSKFAQSLSQKIVKGMLTGPVTILNWSFPRED
                     ISLKESTEQIALAIRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPA
                     FNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLKAIRF
                     KTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVIASL
                     KNLVTATQKIREQL"
     gene            12471..13319
                     /gene="metF"
                     /locus_tag="RJ336_000776"
     CDS             12471..13319
                     /gene="metF"
                     /locus_tag="RJ336_000776"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HDZ5213235.1"
                     /translation="MCSFSFEVFPPRKDENIKNLHAILDDLGQLSPNFISVTFGAGGS
                     INSQNTLEVASLIQEEYQIPSIVHLPCIHSSKEKITQILQKCKEKNLNQILALRGDIC
                     ENLEKSKDFSYASDLISFIKKQEYFEIYAACYPEKHNESKNFIEDIHHLKTKVNAGTD
                     KLITQLFYDNEDFYTFKQNCALAGIDIPIYAGIMPITNKRQVLKISQLCGAKIPPKFV
                     KILEKYENNALALEDAGIAYACDQIVDLITSGVDGIHLYTMNKSKAAIKIYEAVKHLL
                     KEELHA"
     gene            complement(13341..13532)
                     /locus_tag="RJ336_000777"
     CDS             complement(13341..13532)
                     /locus_tag="RJ336_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213236.1"
                     /translation="MIYILEFFKGASLALMLFGALFFFFKYNSFFYLCLGIIPGLLLS
                     LIFVLLIENHKLKNENKLR"
     gene            complement(13529..14209)
                     /locus_tag="RJ336_000778"
     CDS             complement(13529..14209)
                     /locus_tag="RJ336_000778"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDZ5213237.1"
                     /translation="MKDLFLFSSLLDASHTFSYFFHIGLVALIAVIVAMMATRSMQLV
                     PRGMQNLGEAFLEGVLSMGRDTMGSEKGARKYLPLVATLGIIVFFSNIIGIIPGFHAP
                     TASLNLTLSLAIIVFVYYHFEGIRAQGFVKYFAHFMGPIKLLAPLVFPIEIVSHLSRV
                     VSLSFRLFGNIKGDDLFLMVILALVPYIAPLPAYVLLTFMAFLQAFIFMILTYVYLAG
                     ATVVEEGH"
     gene            complement(14278..15618)
                     /gene="radA"
                     /locus_tag="RJ336_000779"
     CDS             complement(14278..15618)
                     /gene="radA"
                     /locus_tag="RJ336_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDZ5213238.1"
                     /translation="MAKNKALFECQACGNQQSKWLGKCPDCGAWDSFVELKAEQIKVL
                     KELAQVSMKTSEAVCIEDVELEHFTRYSTDDNELDLVLGGGLVEGSLVLIGGSPGVGK
                     STLLLKIASNLAKQGKKVLYVSGEESKAQIKLRADRLEANTPNLFLLTELCLENILEE
                     LHKKDYSILIIDSIQTLYSNKITSAAGSITQVREITFELMRVSKAYNISTFIIGHITK
                     EGAIAGPRVLEHMVDVVLYFEGDATKEIRLLRGFKNRFGGTNEVGIFEMTAKGLISAK
                     DLANRFFTRGKAISGSALGVVMEGSRALVLEVQALVCESSYPKRSATGYEKNRLDMLL
                     ALLERKLEIPLGHYDVFVNISGGVKVSETAADLAVVAAIISSFKNRPLSKDSIFIGEL
                     SLNGEIREVFSLDTRLKEAKMQKFKNAIVPSKPLEDIGLKCFVAKELSQVLEWM"
     gene            complement(15618..16484)
                     /gene="ftsY"
                     /locus_tag="RJ336_000780"
     CDS             complement(15618..16484)
                     /gene="ftsY"
                     /locus_tag="RJ336_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDZ5213239.1"
                     /translation="MFNFFKKGLAKTLENIVGVKGENKKITKDLLEEILLEADVSYEI
                     VEEIIYYLPPQNEVKKEDLKRVMGSYFLYEKKETNQEKPFVELILGVNGAGKTTSIAK
                     LAYLYKNQNQKVILGACDTFRAGAIEQLKLWAQKVDVDIVLTAQGHDPSAVAFDTISK
                     AKAKDFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGI
                     LQAKAFNELVKLDGVIITKLDGTAKGGALFSIARELELPIFYVGVGEQMTDLQEFNAS
                     AYLDTLLDPIFE"
     gene            complement(16484..17041)
                     /locus_tag="RJ336_000781"
     CDS             complement(16484..17041)
                     /locus_tag="RJ336_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDZ5213240.1"
                     /translation="MKIKKILLLVAISCLFVACGNDKEKQQNDVNLSTEASINQSDDM
                     NFKLNLIDGGSISVKKENAVLNFNDEDKATLFVFFTTWCTPCIAEIPHLNKLQEKYNN
                     DFNIVGVLLEDKSNDEIQKFIEQHKISYKVANGENNYLLAKALGGVNGIPTMFLYNKH
                     SKLINQYLGLIPEEMLEIDIQKAIL"
     gene            17124..17750
                     /locus_tag="RJ336_000782"
     CDS             17124..17750
                     /locus_tag="RJ336_000782"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDZ5213241.1"
                     /translation="MEKTDFRALQKIRLFKHSKLNFKQDYKIFKECLKIIKLFKAKNI
                     LIFIPLHYEPNLIKFRHILNKNYKLFVPFMQDKSLKIVKLRLPFIKKRFGVLEPIDSF
                     FKAKIDLAIVPVIGVDKNLKRIGHGQGFYDRFFENLNYKPHIIFVQSIDALSQNNLTQ
                     KHDISGKLYINPYKKYYKKERKNDRITYRTYSRYSRTRYRIFSCKKNQ"
     gene            17671..19224
                     /gene="rny"
                     /locus_tag="RJ336_000783"
     CDS             17671..19224
                     /gene="rny"
                     /locus_tag="RJ336_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HDZ5213242.1"
                     /translation="MIESLIALIAAIVGLGIGYLVAKKINDAKYEIFVEQAKAKAKAI
                     EYEAELILKDAKNSILNAELEVKKKYEEKTHKIQKDFNQKFDDLSKKEQKLQQEEEKL
                     KEDKEYLCKSQKHIQDLQSDVDKLKNKYQEKLDDVLKILEHSTGLTQNEAKEIILKKV
                     EENSREQIAHIVRKYEEEAKNEAKRKANFIIAQATSRFAGEFAAERLINVINIKNDEL
                     KGRIIGKEGRNVKTLEMVLGVDIIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRI
                     QPARIEEIHEKVCKEFDSAILEEGETIVMDLGLNKIHPEIVKLIGKLKYRASYGQNAL
                     AHSLEVAHLAGIIAAECGGDENLARRAGILHDIGKALTHDFEGSHVDLGAELCKRYKE
                     HPVVINAIYAHHGHEEATSIESAAVCAADTLSAARPGARREVLEAFLKRVSELEDIAK
                     SKEGIKNAYAINAGREIRVIANAQLVNDDESVLLAKEIAAEIQEKMQYPGEIKVNVIR
                     ELRAVEYAK"
     gene            19233..>19580
                     /locus_tag="RJ336_000784"
     CDS             19233..>19580
                     /locus_tag="RJ336_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDZ5213243.1"
                     /translation="MQDMIDTLIKYGYIVLFFYSLGGGMVGILAAGVLSSQGKMDLSF
                     CIALAFIANTIGSTLLFILGKYYKKDIMPYFKKHRRKLALAMMKTKQHGIILLVTQKF
                     IYGLKTFIPIAAGM"
BASE COUNT         6963 a         3258 c         2897 g         6462 t
ORIGIN      
        1 tgcaaataat gagaaatttt gtaacattta tataaaaaat tatcatatca tataaaagaa
       61 agtatttcta gatttgtttt tttgttaaaa tttacaatac gcattgttaa aattatattt
      121 tacaaagatc aaaaggagtg aataaacttg gaaactttaa gtcaaacttt agctgaaaga
      181 aaaccgcctt tatataaacg tattatcaaa agtcttggat tttgggtgat tataggcatt
      241 attgcaggta ttgtacttgg ctatatagat aaagaattag ccattgctag caaaccagga
      301 gttgattatt ttataggtgc tttaaaggtt cttataggtc ctattatttt tgttactttg
      361 gttttaggca tcattagtct tgaaagttta aaaaaagtag gtagcattgg tgctaaagcg
      421 gttatttact ttgaagttgt aagtacttta gcacttgcta taggtatttt tatggcaaat
      481 gttatgcaac caggccatgg aatgaatctt gatccaagtc aacttgatac aaaaagcgtt
      541 caaaaataca tttctcaaac cacagaagta agtgcgagct ctgagattat gcatatttta
      601 aaagatgcta tgcctactga tattatcacg ccttttacag aaggaaaaac catacaagtt
      661 ttagttattg ctataattac tgctttgatt atttctttaa tgagaataga agataaacag
      721 gcaattcaaa gagtttttga agtggcacaa aattttgttt ttaaaattct acaaatcatt
      781 atgtatttta gtcctattgc cgccttttca gcaatggctg tactcatagc tcaatacgga
      841 attggctctt tgatcaactt agcatattta cttttagtaa tgctgatttc atgtcttgtt
      901 tttatatttg gaatcttagg tctgatttgt tattttgcaa aagtaaatat cttcaaattt
      961 atgagattta tctcaagaga agtattgatc gtttttgcaa ccagttcaag cgagtctgca
     1021 cttgctcctt taatgagaaa actagaaaaa gcaggacttt ctaaagcaac agtcggactt
     1081 gttttaccaa cgggatatag ttttaatctt gattgtacaa atatttatct agctatgagc
     1141 ttaatctttc tagcacaagc tttcaatgta aatttaagtt tagcacacga aatcagtatt
     1201 ttaatagtat taatgatagc ctcaaaaggt gcagtaggtg taactggatc aggttttata
     1261 gtgcttggaa gtacgcttgc ggctctagga aatatggaaa tttcagaagc aaatgcaacc
     1321 ttagcacaag ttctaccagt aactgctata ggtattcttt taggtgttga caaatttatg
     1381 tctgaaatga gagcggttgg aaatctttgt ggaaattcag tagcagcctt aatcgttgcc
     1441 atctgggata aacaaattga ttgggaaaaa ttccgctatg ctatggataa tccagaaaaa
     1501 ttccataatg ctggaatgaa ctaatgggtt ctttggagga aatcatatcg attaacctcc
     1561 tctaaagtat tatctttttt tctaaattgc tttaaaaaac tttcattgaa attaaaacta
     1621 aatccaactt gaacaacagt atcatcaaca gtctctcttg cactataatc acgacgcaat
     1681 aaatttaaac taaatacact ataaggagag taagatactt gataattagt tttatcatta
     1741 tccttactta tatcaaaagc aaaagcggta taagttggaa ttacaaaact cattccaagc
     1801 tgtaaatttt tttctgcttc attgggtata taataattac tataagcctt tataaattta
     1861 ctataaccaa actctgtacc aaagctttta gtatcttttt gttctttttg tttatcaata
     1921 aaaccattaa ctccaaataa aaaatcatct ttttcataac gattgattaa accccatgag
     1981 taattataat tatcttgagc cacaaaaagt tctttttgaa aaagcaaaga attattctcc
     2041 ccctcataaa gagaacttaa atttttaacc tgcgcgtttt cgttttgaaa atccaaattc
     2101 ccatctgttt tatctatacc attattattt tctaaagttt ttgaaagtaa gctatcaaaa
     2161 gtgcttttaa aatccacatt ctcttcttga atttttggag cttctttggt attttcataa
     2221 tcaaagtgct cccaagaatt ttgattatta ttttttgcta aagcctctgt aagttcatcg
     2281 gcattgagta aagaaaacaa tgctattata taaaaaatac ccctcattat tcttatattc
     2341 cttattattt cttgtttgag tatttattat aaaaaaataa tataaataaa aattccacaa
     2401 agactaaaaa ataaaattag caaatttaaa gtaaataagt gtataattaa aataaaaaag
     2461 ggttattaat gcaaaaagac aacctcatag cttttgttat ttttattatc agtactatcg
     2521 catttgttat ttggggattt ggttatattt cgcaacatca attgattctt tttattcttg
     2581 cttctatatt tggcattttt atggcattta atataggtgg aaatgatgta gccaattctt
     2641 ttggaacaag cgttggcgca aaaacagtaa ccattaaaca agctttaatt atagcagctg
     2701 tttttgagct aagcggggca atcttcgcag gcgcagaagt tactaaaacc atacgcagcg
     2761 gtattgttat ttttccaaat tctttagatc ctatgctttt tgttatcatt atgcttgctg
     2821 cacttttaag ctctggggtt tggattttta ttgcaaccaa gaaaggctta cctgtatcaa
     2881 ccacacacag tatagttggt ggaattgtag gtgctagcat tatgatgggg cttttaaaat
     2941 ttgatgggat ccaaacactc tctatggtta aatggagtga aattttaaga atagctattt
     3001 cttggatagc ttctcctctt ttagggggta ttgtagctta tattatttat tcatatattg
     3061 ataagaaaat tttaaaacca tcagaaaaac taaatgatga tttgaaaaat atcaaaaaag
     3121 aaagaaaaaa attcaaagaa gaatactttt taaatttaaa aacaaaatcc caagaagaac
     3181 aaatcaaaga actttccgct atagctttag atgaggaaga acaagaaaat aatttctata
     3241 gaaataaaat gaaggaattt aaggatcaag aaaaagatat agatatttac tctattttaa
     3301 aaactcatat gccaatcatt gcttgtattg ctgctgctat catttcggca atgtttttat
     3361 ttaaaggttt aaataatgtt agcactttaa atattttaca aaacttttgg attatcggaa
     3421 ttataggaac tataagttat gttgtaacat ttgctatagt caaaatcgtt aaaaaaacag
     3481 aacttaataa aactactgat agaattttct catggtttca aatatttaca gcctctagtt
     3541 ttgcattttc acacggagcc aatgatatag ccaatgctat aggtcctttt gcagcgattt
     3601 tagatgtctt aaaaaacggc acaattaacg cgacttctcc tgtacctttt gctgctttag
     3661 ctatgtttgg agttgctcta gttgtagggc tttggttttt aggtaaagaa gtgattacta
     3721 cagtgggttc aaaacttgca accatacgct ctactactgg attttctgca gaacttggtg
     3781 caagcatagt tatactctta gctacacaat ttggaattcc tgttagctcc acccatatac
     3841 tcataggtgc tatattgggt ataggagtgt ataataaaaa cgcaaattgg attatgatga
     3901 agcctatagg attggcttgg attatcactt taccagccgc tggtattatg gcagcacttg
     3961 tatttttagg atttaaacta tctttgggaa tttaagtttc taaaatattt tttcctttaa
     4021 ttatatgcat tttaatcttt ccaaaaagtt tatcctcaga ataaagagaa ctttttggag
     4081 caaaaatttc ttcattctca tcaaaaagaa ctagattagc ttctttgcca acttctataa
     4141 ctccactatt taaacctaaa aattcactag gatttttact tgtaaatcga caaagctctt
     4201 gccaatttaa aaatccttct ttgattaaaa aagtataaca aagacttata aattcgcata
     4261 cgctatgaat tccaaaagcc gcttcatcaa aagctaaatc ttttaaagaa attgattttg
     4321 cactatgcag ggaagttaaa aagctaatct ttccttcttt taaagcctct cttaaagcca
     4381 aaacatcttc tttgcttctt aaaggtggca taagtttcgc agccgtatta aaatcttcac
     4441 aagcactatc atctttgata agatgatgaa tgcttacaag ttttaaatcc ttttcatcta
     4501 ataatactaa agaatctttc aaacttaaaa gatcaaaaat aactttattt ttataaaatt
     4561 tagccaattc tttcatttta gctatctggc tagtttcagc gattttactc atgcctataa
     4621 gccctagctc aaaactcatt tcacaatcat tcatcactcc attatcatca aaatccttat
     4681 cataacaacg cacaaaaatt ggagagtctt tcataaaagc atattgtgaa cttactttta
     4741 aagtatttgc atctaaagag ctgtcaagtt ctagagcaca agcaccttta tttaaaagag
     4801 tggctaaatt tttaagcttg ccgtttgcat ccttaacccg cacacttgaa aaaatttgca
     4861 tctttctttg agctaaattt tgtaaaaata aagcaaaact ttcttcatca aaatccatgc
     4921 aatcacgcaa aactatacta gaaattcctc cttttagaca ctcattttct aaaagctcta
     4981 aattagctaa agaaaattta tcgtttttta aactcacaca caaatccaca aaagatggaa
     5041 gtaaagtcat acctttagca tctaaaattt cttcgccttg taaattagaa ccaatattgg
     5101 taatttttcc ttctttaatc tctatatctt gtaaagaatc tccataaatt tttgcatttt
     5161 taattatcat gatttttcct taatcatttt gctttaataa actctgcgtt gcttcttgca
     5221 cgcttttacc cttaaaaatt gccactactt catttacaat aggtgtataa attcctttca
     5281 tttttgctag tttttctata gcataagcag tttttacacc ttctgctact tcattaagtt
     5341 cgactaaaat actatctaat ttttgatttt gcgccagttt taaacctact ctataatttc
     5401 ttgataaaac actcgttgca gttaaaaaca aatcccctgc cccacttaac cctaaaaaag
     5461 tttcttcttt agcaccaaaa aatttaccaa aacgatgcat ttctataagc cctcttgaaa
     5521 tcagtgccgc tcttgcatta ttgccaagtt ttaacccatc actaatccca cttgcaattg
     5581 ctaaaacatt cttataagca ccacaaattt cagcaccacg aacatcatta tcaatataag
     5641 ttttaataaa atcagggaaa aaacttgcaa attttttaca aagctcttga tttatcccgc
     5701 taatcatcaa agcagtagga agtttttgca ttacttcagc agcaaaagaa ggaccgctta
     5761 aaacacaaaa attttctttt ggtacaaaat ctaaaaaaat ttcatctaaa aattgacaac
     5821 tttgatcttc tatgcctttt gaagcaatta aaattttttg tcccttgttg atgaaatttt
     5881 ctttaagcca agcacgcatc ccttgagaac ttaaagcaaa aacaagatat tcacattcta
     5941 aagcttcttt tatgctaaca aaatcttcta aatcacgctg atgcaaagaa ctaataaaac
     6001 aattgtgatt ttcttttaag gctagatgta aagcactgcc ccattttccc gcaccaataa
     6061 ccgctatacg catcaaccaa gctttgtttt taaaatttca tttacttttg caggattaaa
     6121 agctcctttg ccttctttca ttgtttgacc cacaaaaaat ccaaaaagct tgtctttacc
     6181 acttttatac tctgcaacct tatcggcatt tgcatttaaa atttgttcaa tcaccgcttc
     6241 tatggctgaa tcatcactta cttgcttaag tcctagcttt tctatagctt catcaatttc
     6301 cacgctagta ttttcaaata caaaagctaa gacatcttta gccgcttttg cactgatggt
     6361 gccatcttct atgcgtttaa ttaaaactcc aagcttttga gcatctacgg gagaattttc
     6421 tatagtcaat tctcctttta aaagtcccat aagttcagta tttaaccaat ttacgcaaag
     6481 cttagaattt aaattttgag aaataagact ttcaaaaaaa cgactcattt ctaaagaact
     6541 gattaaaacc tcggcatcac tttcttttat accaagctcg tctataaagc gtgctttctt
     6601 ctcatcagga agttcaggaa ttttaatatc caaaaactca tcttttaaca aaacaggaag
     6661 caagtcaggg tctggaaaat aacgatattc agccgcttct tctttgccac gcatacttct
     6721 tgtaactaaa tttgttgtat caaaaagtct ggtttcttga actacttctt gttcgtaagt
     6781 tccatcttcc caagcctcac tttgtctttt tacctcatat tctatggctt tttggataaa
     6841 acgaaaagaa ttaagatttt taatctctac tctagtataa agttttgtat cgcccttagg
     6901 ccttatacta acatttgcat cgcatctaaa acttccttct tgcatatttg catctgaaat
     6961 atctaaaaag cgtataatag aatgaagttt tttaagataa gccaccgcct catcgctact
     7021 tctaagctca ggctcactga caatctcaag caaaggagtt cctgcacgat ttaaatccac
     7081 tttagaaaaa ttattttcat ggatattttt acctgcatct tcttctaagt gtgctcttgt
     7141 aatacctatg cgtttatttt caccctttac attgataaaa agctcacctt tttctactat
     7201 agggatatca aattgtgaaa tttgataggc tttaggtaaa tctggataaa aataattctt
     7261 acgattaaaa acactttttt tattaattgt tgcattgaca gcttttccaa aagctatagc
     7321 tttttttaca gcctcttcat ttaaaacagg caaagctcct ggtaaggcca aacaagtggg
     7381 acaaacattg gtatttggag cttctccaaa agaagttgca catgagcaaa agatttttgt
     7441 ttttgtattt aactgagtat gaacttcaag acctataact acttcaaaca taaaatttcc
     7501 ttgaattttt aaatgtttta ttttatcttt ttttctttta gaaaggcttt aaatattaac
     7561 tttaaatgct ataattctta gacaatttat atttaaggag ttaaaatgcc attattagac
     7621 agctttaaag ttgaccatac taaaatgcca gctcctgctg tgcgtttagc taaagttatg
     7681 aaaacaccta agggtgatga tattagcgtg tttgatttgc gtttttgtat accaaataaa
     7741 gacattatga gcgaaaaagg tacacatacc ttagaacatt tatttgcagg atttatgaga
     7801 gatcatctta attcaaattc agttgaaatt attgatattt cacctatggg ttgtcgcacg
     7861 ggtttttata tgagtttaat tggaacacca gatgaaaaaa gtgttgcaaa agcttgggaa
     7921 gaagctatga aagatgtttt aagcgtaagc gatcaaagca aaattcctga acttaatatc
     7981 tatcaatgcg gaacttgcgc aatgcattct ttagatgaag ccaaacaaat tgcccaaaag
     8041 gttttaaatc taggtattag cataatgaat aacaaagaat taaaactcga gaatgcttaa
     8101 aaagaatctt tattttttag acgattaagc tttaattaat atatttttat atatgatttt
     8161 tgaaatttta ttattttaaa aggagaaaaa atgaaactga tgtgcgagat gtgtagtatc
     8221 tagtgcgtcc tttggcttaa cattatgttt ccaaaggtcc aaaaagtgga taaggagata
     8281 taatgtgtaa gaaagtcaaa aaagtttatt ttttcaaaat actcatttaa aatcttaact
     8341 tacaaaaatt tctctaaata aaatttaatt caaaatatct tcttatcctt aattttaatt
     8401 taaggagcaa aaatgaactt acctatactt gatttacaag cttatgaaaa agataaaagc
     8461 acttttctta aaaatttaag agaaattgct tctaaaatag gtttttttta tcttatcaat
     8521 accagtatag ataaaaattt aaacgagaaa ttattcaaac ttggcaaaga attttttaat
     8581 ctttctagaa gttcgaaaga gcttatttct atggtacatt ctcctcaatt tagaggttat
     8641 actagcgaag gttttgaata cacagcagga tctaaggatt atagagaaca actggatata
     8701 ggcacagaaa gagatgcttt aaactggaat ttaaactcac ccttatggca aagactagaa
     8761 ggtcctaatc tttggcctag tgaaattcca gaacttaaaa aaactttctt aacttggcac
     8821 aaacaaacca aaaaagcttg tttaaagctt ttaaaagcct tcgctcaagc tcttgatcta
     8881 cctaacaatg cttttgataa actttatgga gaaaattctt acgaacattg taaaatcata
     8941 cattatccaa aaagctcaaa aaatatcact caaggcgtag gttcacataa agatggtggg
     9001 cttatcactt ttgtttttca agaaaaacaa agcggacttg aggcttttat agatggtaaa
     9061 tggcttagta tacccccact tgaaaatagc gttgtagtta atataggaga atttttagaa
     9121 ctagctacca atggctattt aaaagctact attcaccgcg tgaatttaag cccaaaagaa
     9181 cgctttagca tagcttattt tcttggagtg cagcttgata aggatatacc tatttttaag
     9241 ttaaatccag agcttgctaa agaaagtaaa ggtatggata ctgatcctaa aatccacttt
     9301 taagaaatgt tgcaagtaat tattttaaaa gaatgatacg ctctcatcct gatgtggcaa
     9361 gtatttatca tagtgacttg atagaaaaat ttaaatttgc gtaaaggaga aaaaatgact
     9421 ttatttacta aagctttttg cgtcgctact ctttttacca gttttgcatg ggcaaatgaa
     9481 gaacttaaag ttggctcttc tataacacct catgcagata ttttaagatt tataaaatca
     9541 gcgcttcaaa aacaaggtta tgatttaaaa atttatgaat tcaatgatgg ggtaatccct
     9601 aatgtaatgg ttgaaaatgg tgagttagat gctaattatt ttcagcatga gccttattta
     9661 aaagaattca atcaaagaca aggcactcat cttgtaaaag ttgctagtat ccatatagaa
     9721 cctatggcag tgtattctaa aaaacataaa aaatttaacc ccgaggaagg acaaagcatt
     9781 tctataccca ataatcctac aaatgaaagt cgtgctttac gcattgtagc aagcaaagga
     9841 cttatagaag ttaaggataa tgagctcatc actcctttag atatcactaa aaatcctaag
     9901 aagcttaaat ttgtagagtt aaaagacgct caacttacaa ggagtttaga tgatgtagat
     9961 tattctctta ttaatagcaa ttttgctatt ttagcaggtt taaaccctgt aaaagatggg
    10021 ctttatacag aaagtaaata tagtgaatat ggcaatatca tcgccgttaa agaaggtaat
    10081 gaaaaccttc ctaaaatcaa agccctagta aaggccttgc aaagcgatga agttaaaaaa
    10141 tttatagaag aaaaatatca gggtgcttta atccctacat tttaaggaga acaaatatga
    10201 aaaattcaat catttcttac ccaagaatag gtgcaaatag agaattaaaa tttgctattg
    10261 aaaaatactt taaaaaccaa agttctaaag aggagctttt aaagagtgct aaggatttaa
    10321 ggattagaca ctggcaagaa attcaaaaag ctggcattga ttttatccct agtaatgatt
    10381 tttcacttta tgataatgtc ttagatgcag ctgtgctttt taacattgtt catacaaagt
    10441 ataaaaattt aaatttagat gctttagatg aatactttgc tcaaagtcga ggttatcaag
    10501 gagaaaatgg agatgttaca gccttagcaa tgaaaaaatg gttcaataca aattatcatt
    10561 atttggtgcc tgagtgcgat aatgctgata ttatagcttt aacaggggat aaaattttta
    10621 aagaatatct cgaagctaaa gagcttggca tagaaagcaa gcctgtttta ataggcattt
    10681 tcacactttt taaactcatt gcctttaaag atgaaaaaac tcaaaaactc gccaaagaaa
    10741 agcttttaaa cgcttacata gagctttttg ataaactaaa tgaacttaaa gtaacatggc
    10801 ttgaacttga tgagccttat ttggtttatg atttaagcaa ggaagatatc gctttgtttg
    10861 aagaatttta ccaagagctt ttaaatcaca aaaaagatct taaaatttta cttcaaagct
    10921 attttggaga cttaagagat atttatccta aacttttaga aagcaaattt gatgctttgg
    10981 gtcttgattt tatcgaaggt aaacaaagct tagccttgat tcaaaaatac ggctttgcta
    11041 aagataaaat cctttttgca ggtcttatta acggcaaaaa tatctatgct aatgattatg
    11101 ctaaaagcct aaagcttatt aaagaacttc aaaaatatac acaaaatatc gtcttaaaca
    11161 cctcttgttc gcttttgcat gtgccttata gcactgaatt tgaaagcaaa ttagattcaa
    11221 gctatcttaa actttttgcc tttgctaaag aaaaacttca agaacttaaa gatttaaaag
    11281 aaattctaaa ttctagcgaa gaaaatccgc tctttagagc caatcaagag ctttttaaaa
    11341 atatcccaga gcgtttagat gaaaaagtca aagcaaggct taaggcttta aaaaaagaag
    11401 attttaccag aacgcctagt tttaaagaac gtgccttaat ccaaaaagaa tttttaaaac
    11461 tccctctttt accaaccaca accataggtt cctttcctca aagtgccgat gtaagatcta
    11521 atcgccttgc ctttaagcaa gaaaaaattt cagctcaaaa ctacactgaa tttaaccaac
    11581 aaaaaatcaa agaatgcata caaattcaag aagaaatagg acttgatgtt ttagtgcatg
    11641 gagaatttga aagaaatgat atggtggagt attttggaga gaatttaaag ggctttttat
    11701 ttactcaaaa tggctgggtt caaagctatg gcacaaggtg cgttaagcct cctgtaattt
    11761 ggggtgatgt atcacgcaca aagcctatca ccttagcttg gtctaaattt gcacaaagtt
    11821 taagtcaaaa aatcgtaaaa ggtatgctaa ctggacctgt aaccatactt aattggtcct
    11881 ttccaagaga agacatcagt ctaaaagaaa gcactgagca aattgcctta gctataagag
    11941 atgaagtatt agatcttgaa aatgcaggta taaaaatcat acaaattgat gaagcggctt
    12001 tgcgtgaaaa actgccttta agaaaaagtg attggcatag tgagtattta gattgggcta
    12061 ttcctgcttt taatcttgtg catagcgggg taaaagctaa aactcaaatt cacactcata
    12121 tgtgttatag tgaatttagt gatatcttaa aagaaattga cgctatggat gctgatgtga
    12181 tttcttttga agcttcaaga tcaaacttaa gtcttttaga taccctaaaa gctattcgtt
    12241 ttaaaactga ggtgggacca ggagtttatg atatacatag ccctagagtt ccaagcgtag
    12301 aagaattaag tttaactata gaaaaaattt taaacaaatt acctaaggag caaatttgga
    12361 tcaatccaga ctgcggactt aaaacaagag cctatgaaga agttatagcc tctcttaaaa
    12421 atttagttac ggctacgcaa aaaatacgag aacaattata aggagttttc atgtgtagtt
    12481 tttcttttga agtttttcca ccaagaaagg atgaaaatat caaaaatctt catgctatct
    12541 tagatgattt agggcaatta agccctaatt ttatcagcgt aacctttgga gctggaggct
    12601 ctattaactc acaaaatact ttagaagttg caagcttaat ccaggaagaa tatcaaattc
    12661 ctagcatagt gcatttacct tgcatccatt ctagtaaaga aaaaatcact cagatacttc
    12721 aaaaatgcaa agaaaaaaat cttaatcaaa ttcttgctct aagaggcgat atatgtgaaa
    12781 atttagaaaa aagtaaagat ttttcttatg ctagtgattt aatttctttt ataaaaaaac
    12841 aagaatactt tgaaatttat gccgcatgct atcctgaaaa acataatgaa tctaaaaatt
    12901 tcatcgagga tatacaccat cttaaaacta aggtaaatgc aggaacagac aagctcatta
    12961 ctcaactttt ttacgataat gaagattttt atacttttaa acaaaattgt gctttagcag
    13021 gtattgacat acctatttac gcaggtatta tgcctattac taacaaaaga caggttttaa
    13081 aaatttctca actttgcgga gctaaaatcc ctcctaaatt tgttaaaatt ttagaaaaat
    13141 atgaaaataa tgctttggct ttagaagatg caggtatcgc ttatgcttgc gatcaaattg
    13201 tcgatttaat cacaagtggc gtagatggaa ttcatcttta tactatgaat aaatccaaag
    13261 cggctattaa aatttatgaa gctgtaaagc atttgcttaa agaagagctt catgcttaga
    13321 aaataaacta ttttttgctt ttatcttaac ttattttcat tttttagctt atggttttct
    13381 ataagtaaaa caaaaattaa agataaaagc aaacctggta taatacccaa gcaaagatag
    13441 aaaaaagaat tatatttaaa aaagaagaaa agtgcaccaa aaagcattaa agctaaagat
    13501 gcacctttga aaaattctaa aatatagatc aatgaccttc ctcaacaaca gttgcacccg
    13561 ctaaatatac ataagttaaa atcataaaaa taaaagcttg taaaaatgcc ataaaagtta
    13621 aaagcacata agcaggaagt ggagctatgt aaggaactaa agctaaaatt accattaaaa
    13681 ataaatcgtc acctttaata tttccaaaca aacggaagga caaagaaacc acacgagaaa
    13741 gatgagagac tatctctata ggaaacacca aaggagctaa aagtttaata ggtcccatga
    13801 aatgagcaaa atactttaca aaaccttgtg ccctaatacc ctcaaaatga taatatacaa
    13861 aaactataat agccaaggac aaagtcaaat ttaaacttgc agttggagcg tgaaaaccag
    13921 gtattatacc tataatatta ctaaaaaaca ctataatccc caaagttgca accaaaggaa
    13981 gatattttct tgcacctttt tcacttccca tggtatctct acccatagat aaaactccct
    14041 ctaaaaaagc ctcacctaaa ttttgcatac cgcgtggaac aagttgcata gaacgagtag
    14101 ccatcatagc cactataaca gcaattaaag ctaccaaacc tatgtgaaaa aaataagaaa
    14161 aagtatgact tgcatcaagc aaagagctaa ataaaaataa atctttcatg gtttcctcaa
    14221 aaattttatt ctaaactcgg aattctagca aaatcttact tatattttaa tgaaaattta
    14281 catccattct aaaacttgcg aaagttcttt agcaacaaaa cacttaagcc ctatatcttc
    14341 caaaggctta gaaggaacaa tggcattttt aaatttttgc attttagctt cttttaaacg
    14401 cgtatcaagg ctaaaaacct ctctaatttc tccatttaaa ctaagctccc ctataaaaat
    14461 actatctttg ctcaaagggc gatttttaaa acttgaaata atcgcagcaa ccacagccaa
    14521 atccgcagca gtttcactta cttttactcc gccgctaata tttacaaata catcataatg
    14581 ccctaaagga atttcaagtt ttctttcaag caaagccaaa agcatatcta agcgattttt
    14641 ttcatatcct gtagcgctgc gttttggata agaactttcg cacactaaag cttgaacttc
    14701 taaaaccaag gcacgagatc cttccatcac aacacctaaa gcacttcctg aaatagcctt
    14761 tccacgagta aaaaaacgat ttgccaaatc ttttgcactg atcaaaccct tagcagtcat
    14821 ctcaaaaata cctacttcat tcgttccacc aaaacgattt ttaaagcctc ttaaaagtct
    14881 gatttcttta gtggcatctc cttcaaaata aagcaccaca tctaccatat gctcaagaac
    14941 cctaggccct gctatagcac cttctttagt aatatgccct atgataaaag tactgatatt
    15001 ataagcctta ctcacacgca taagttcaaa agtaatctca cgcacttgag tgatgcttcc
    15061 tgctgctgaa gtaattttat ttgaatataa agtttgtata gaatcaatga taagaatgct
    15121 ataatctttt ttgtgcaatt cttctaaaat attttcaagg caaagttcag taagtaaaaa
    15181 taaattcgga gtattagcct caagacgatc agctcttaat ttaatctgag ctttactttc
    15241 ttcgccactg acataaagca cttttttacc ctgtttagct aaatttgaag caatttttaa
    15301 caaaagtgta gattttccca cacctggact tccgcctata agcactaaag aaccttcaac
    15361 aagccctccg cctaaaacca aatcaagctc attatcatct gtgctgtatc ttgtaaaatg
    15421 ttctaactcc acatcttcaa tacaaacagc ctcacttgtt ttcatactaa cttgcgcaag
    15481 ctcttttaaa actttaattt gctcagcttt taattctaca aaactatccc aagctccaca
    15541 atcaggacat tttccaagcc atttgctttg ttgatttcca caagcttgac attcaaaaag
    15601 tgctttattt tttgccatta ttcaaaaata ggatctaata aagtatctaa gtaagcactt
    15661 gcattaaatt cttgtaaatc cgtcatttgc tcacccacgc ctacataaaa aataggaagc
    15721 tcaagctctc ttgctatact aaaaagtgca ccccctttag ctgtcccatc aagctttgta
    15781 ataatcacac catcaagttt tacaagctca ttaaaagctt tagcttgtaa aattccagca
    15841 tttccctgtg ttccatctaa aactaaaatt tttctatggg gtgcgccttc taaagctttg
    15901 tttgaaattc ttacaatttt ttcaagctca tgagctaaat ttttttgatt ttgcaaacgc
    15961 cctgctgtat cgataataac tctatcaaaa tcctttgctt ttgctttaga aatggtatca
    16021 aaagcaaccg ctgaaggatc atgcccttgt gcagttaaaa ctatatctac atccactttt
    16081 tgcgcccaaa gttttaattg ctcaatcgca cctgctctaa aagtatcaca cgcccctaaa
    16141 atcacttttt gattttggtt tttgtataaa taagcaagct tggcaatact tgttgttttt
    16201 cctgctccat ttactcctaa aataagctct acaaaaggtt tttcttgatt ggtttctttt
    16261 ttttcataaa gaaaataaga acccataaca cgctttaaat cttctttttt tacttcattt
    16321 tgaggtggta aataataaat tatctcttca actatttcat aacttacatc tgcttcaagc
    16381 aaaatttctt caagcaaatc tttggttatt tttttgttct ctcctttaac tccaacaata
    16441 ttttcaagag tttttgcaag tcctttttta aaaaaattaa acattaaagt atagcctttt
    16501 gtatatcgat ttctagcatt tcttcaggaa taagccctaa atactgatta atcaatttag
    16561 aatgcttgtt gtaaagaaac atagtaggaa ttccatttac cccgcctaaa gctttagcta
    16621 aaagatagtt attttcacca ttagcgactt tataagatat tttatgctgt tctataaatt
    16681 tttgaatctc atcgttagat ttatcttcta ataaaactcc aactatgtta aaatcattat
    16741 tatacttttc ttgtaattta ttaagatgag ggatttcagc aatgcaaggg gtacaccaag
    16801 tagtaaaaaa tacaaacaaa gttgccttat cttcatcgtt gaaatttaaa acggcatttt
    16861 cttttttaac tgaaattgat cctccatcaa tcaaattaag tttaaaattc atatcatcac
    16921 tttgattgat acttgcctcg gtacttaaat ttacatcatt ttgctgcttt tctttatcat
    16981 tgccacaagc aacaaacaaa caagatattg ccactagtaa aagtattttt ttaatcttca
    17041 ttatttatca atcctttatt cttctttata aaaatgctaa aattataaca tacataagat
    17101 aatatttttt taaaggcata ttaatggaaa aaacagattt tagggcattg caaaaaatac
    17161 gccttttcaa acattcaaaa ctaaatttca aacaagatta taaaatattt aaagaatgtc
    17221 ttaaaataat aaaactattt aaagctaaaa atattttaat ttttattcct ttgcattatg
    17281 aaccaaactt aataaaattt cgccatattc ttaataaaaa ttacaaactt tttgttccat
    17341 ttatgcaaga taaaagttta aaaattgtaa aattaagatt gccttttatt aaaaaaaggt
    17401 ttggggtttt agagcctata gattcttttt ttaaagcaaa aattgattta gctattgtgc
    17461 ctgtaattgg cgtcgataaa aatttaaaaa gaataggaca tgggcaaggt ttttatgata
    17521 gattttttga aaatttaaat tacaaacctc atataatatt tgtccaaagt atagatgctt
    17581 taagtcaaaa taatctaaca caaaagcatg atatttcagg aaaattatac ataaaccctt
    17641 ataaaaaata ttacaagaaa gaaagaaaaa atgatagaat cacttatcgc acttatagcc
    17701 gctatagtcg gactcggtat aggatattta gttgcaaaaa aaatcaatga tgccaaatat
    17761 gaaattttcg tagaacaagc taaagccaaa gccaaagcta tagaatacga agcggagctt
    17821 attttaaaag atgcaaaaaa ttcaattctt aatgcagaat tagaagttaa aaaaaaatac
    17881 gaagaaaaaa ctcacaaaat tcaaaaagat tttaatcaaa aatttgatga tctttctaaa
    17941 aaagaacaaa aacttcagca agaagaagaa aaactaaaag aagataaaga atacctttgc
    18001 aagtcacaaa aacacattca agacttacaa tctgatgttg acaaattaaa aaataaatat
    18061 caagaaaaac ttgacgatgt tttaaaaatt ttagaacatt ctacaggact tacgcaaaat
    18121 gaagccaaag aaatcattct taaaaaagta gaagaaaatt ctcgcgagca aattgcacat
    18181 atagtaagaa aatatgaaga agaagcaaaa aatgaagcca aaagaaaagc taacttcatc
    18241 attgctcaag ctacttctcg ttttgcaggt gaatttgcag ctgaaagact tatcaatgtt
    18301 attaacatta aaaacgatga acttaaagga cgtatcattg gtaaagaagg gcgcaatgtt
    18361 aaaaccttag aaatggtttt aggtgttgat attatcatcg atgatacacc aggtgctatt
    18421 atagtaagtt gttttaatct ttatcgccgt gctattgcta caaaagttat agaactttta
    18481 gttgaagatg gcagaattca acccgcgcgc atagaagaaa ttcacgaaaa agtgtgtaaa
    18541 gaatttgata gtgctattct agaagaaggc gaaaccatag ttatggatct aggtttaaat
    18601 aaaatacacc ctgaaattgt aaaactcata ggaaaactca aataccgagc aagctatgga
    18661 caaaacgctt tagcacattc tttggaagtg gctcaccttg caggaatcat tgctgctgag
    18721 tgtggtgggg atgagaattt agcacgtcgt gcgggaattt tacatgatat aggaaaagca
    18781 ttaacccacg attttgaagg atctcatgtg gatttaggtg cagaactttg caaacgctat
    18841 aaagagcatc ctgtagtaat caatgctatt tacgcacatc atggacacga agaagctaca
    18901 agcatagaat cagcagctgt ttgtgcagca gatactttaa gtgctgcacg acctggagct
    18961 agaagagaag tattagaagc tttcttaaaa agagtcagtg agctagaaga tatcgctaaa
    19021 agtaaagaag gaattaaaaa tgcctatgca atcaatgccg gaagagaaat tcgcgtcata
    19081 gccaatgctc agcttgttaa tgatgatgaa agtgtacttt tggctaagga aatagcagct
    19141 gaaattcaag aaaaaatgca atatcctggt gaaattaaag tcaatgttat acgtgaactt
    19201 agagctgtag aatacgctaa ataaggttta ttatgcaaga tatgattgat actttaataa
    19261 aatatggtta tattgtttta ttcttttact ctttaggggg cggaatggtt ggaattttag
    19321 ccgcaggagt tttaagttct caaggaaaaa tggatcttag tttttgcatt gctcttgctt
    19381 ttattgctaa taccataggt tcaactttgc tttttatact tggaaaatat tacaaaaaag
    19441 atattatgcc ttattttaaa aaacaccgac gcaagctagc ccttgctatg atgaaaacaa
    19501 aacaacacgg aattatttta cttgtaactc aaaaatttat ttatggttta aaaactttca
    19561 ttcccatagc tgcaggtatg
//
LOCUS       DAPWGO010000025        19326 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.026, whole genome shotgun sequence.
ACCESSION   DAPWGO010000025 DAPWGO010000000
VERSION     DAPWGO010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19326
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.026"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            11..766
                     /locus_tag="RJ336_000785"
     CDS             11..766
                     /locus_tag="RJ336_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HDZ5213244.1"
                     /translation="MKKILSIALVALVGLFLGACSDSKNKESNASVELKVGTAPNYKP
                     FNYKENSKLTGFDTDLVEEIAKKNGIKIVWVETNFDGLIPALKAGKIDMIASAMSATD
                     ERRQSVDFTKPYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGTLQENTAKAIKNAQ
                     VQSNKDLNIAVLALKNNKIDAIVADQDTAKGFLAENPELVSFYQETDGGEGFSFAFDK
                     NKQKDIIEIFNKGIDEAKTDGFYDTLIKKYELE"
     gene            complement(790..1428)
                     /locus_tag="RJ336_000786"
     CDS             complement(790..1428)
                     /locus_tag="RJ336_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDZ5213245.1"
                     /translation="MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQK
                     QYQEKKLDMDEFMTFFLQSVKGKNEDRISSLVDEFIKIYIKPYEKAKELIIKYQDQRC
                     IIISATAEFLVRKIASFLGVRESIAIKCERVGDKFSGKAYGIYSFKEGKVLRLKEYLG
                     KDYEKWMKDSYFFSDSINDLPLLESVSKAFVCNGDEKILKIAKERKYEILTF"
     gene            complement(1425..2414)
                     /locus_tag="RJ336_000787"
     CDS             complement(1425..2414)
                     /locus_tag="RJ336_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213246.1"
                     /translation="MAYLKIKNFKKAYGGKIIFEDINFSAKKGEFITLLGPSGCGKST
                     LLRCIAGLSQINGGKISLNDKDLTKLSPQKRNIGMVFQNYALFPNLNVFENVAFGLKI
                     KKMDKKDIEKRVKKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVTKPDLLLLDEP
                     LSALDAKIRKHLRVQIKEIQKELELTTIFVTHDQEEALELSDRIILMNEGKIIQNSNA
                     NNLYLLPESHFVASFIGNYNILSPKELDSLGLKHDFKKDIALRPETIEISNEGLEAKI
                     KEKSLLGNIIRYRVRVQEIEFKVDTLNFSTHSTYEVGDKIALKFNLSLAKELK"
     gene            complement(2418..3197)
                     /locus_tag="RJ336_000788"
     CDS             complement(2418..3197)
                     /locus_tag="RJ336_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ5213247.1"
                     /translation="MNENLSLKAKIYHYVVLFLVFLFLALPLMATFLYSISTSWGVSV
                     LPDDLTLKWYQELFHDERFLLALWHSLLVCVGSILLSVILVFPLVFVLNYYFLKLKAF
                     VNILIIMPFAVPPIVSCVGLLQLYADNIGGTAWILIFTYFTIALPFIYRALDNAMSNV
                     NLNELIASNAMLGGSLMGAIFKLVLPNLRNGILVAVFLSFSFLIGEFLYANILVGSAY
                     ETLQVYLYNIKNQSGHYSSALVIVYFVLIFITTFIASLIKE"
     gene            complement(3198..4037)
                     /locus_tag="RJ336_000789"
     CDS             complement(3198..4037)
                     /locus_tag="RJ336_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ5213248.1"
                     /translation="MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSL
                     ANFIHIFESKFYLQSIINSLQISFISSIFGLLIGLLASYSLFILAPSKICNFLFSLNT
                     MISNFSGVPLAFAFIIVLGSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAI
                     LLLLPAFKSLENSHLNACKMLGGGNFLYWLKIALPLLAPTLFGVFVILFANAFGAYAT
                     IYALSSGNFNVAPVRIAALIAGDINLDPYMASALSIIITIIMLVVTFIANFLSKKYNF
                     KVL"
     gene            complement(4034..4843)
                     /locus_tag="RJ336_000790"
     CDS             complement(4034..4843)
                     /locus_tag="RJ336_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HDZ5213249.1"
                     /translation="MMSKVILVVLDGLNCKSASINMGYLNALCKENLGKFYSLECELP
                     SMSRPLYECLLTGVKPVLSGIINNKLSFSKQTSIFDLCKEQGLKAGSAAYHWVFELYN
                     KKEFIPSLHRHIEDENLTLPYGHFYYEDDYLDSHLFADGEHLRNKYNLDFTLIHSMNI
                     DDAGHKFGSHSIEYANKTKKVDVLISEYLPTWLEQGINVIITSDHGMTEGKSHGGLSE
                     DEILVPFFTFGSAFSYENAKIKQDEICGSICEILGLKHDKRYNDEILKAKK"
     gene            complement(4840..6165)
                     /locus_tag="RJ336_000791"
     CDS             complement(4840..6165)
                     /locus_tag="RJ336_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HDZ5213250.1"
                     /translation="MKKVILTSAMLCSVLFGIQEHEANLAGHIIIDSKSTVKPPKDAP
                     DFFKTYGKFANITREEKIGTFKSKGNRETDFYLPFKNQPIQGHSGIKYIPKKDVFWVI
                     SDNGLGKKYNSYDAMLYAHEFKFDFKNSKYELLKTVFFKDSDKKYPYPITTETTKERY
                     LSGADFDTESIQLINDEFYIGDEFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPNL
                     KFSDKPDGENEKFNIKRSKGFEAMASSKDGSKLYLLLEGSIYNNNAYENEKGKEYLRI
                     IEFDVKNKKFTGKTYKYFLEDKSHSIGDFNMIDDKYGIIIERDQKEGTKDKACKEGED
                     TKHCFNNVAQFKRIYKVKLDDKTHEAQKISYIDLLNIKDRNKISKKPLVNDKFVFPFE
                     TIEGVDIVDDSHIVVENDNNFPYSSSREPNKSDDNEFILLEVKDFLKSK"
     gene            complement(6176..7222)
                     /locus_tag="RJ336_000792"
     CDS             complement(6176..7222)
                     /locus_tag="RJ336_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDZ5213251.1"
                     /translation="MSKKFFLSLGLVVLLFSNSQAIDENLIKAVQAEGRVNSLAMPDT
                     WANWKDTWADLKNLYGIEHSDTDMSSAQEIAKFKAEKKNASGDIGDVGASFGEIAVKQ
                     GVAQPFKTSYWDQIPTWAKDKDGNWLLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNYK
                     ITVGDVSVAAQAVSAVLAANYALSGDEKDLSPALAFFNTLAKQGRLVNNDVSIANLEK
                     GEVEVGLVWDFNGLGYRDKVGKDRYEVLIPADGSVISGYTTIINKYAKHPNAAKLARE
                     FILSDKGQINLAKGYARPIRIDHITLPDDIKAKLLPSEQYENARAIKDQKAWEKSAKE
                     LPQLWQEKVIVDMK"
     gene            7339..8322
                     /gene="corA"
                     /locus_tag="RJ336_000793"
     CDS             7339..8322
                     /gene="corA"
                     /locus_tag="RJ336_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDZ5213252.1"
                     /translation="MLYIYIKTQNALVQRINFNLDSQELPQNILWIDLLHPSAAEIAF
                     ISSEFNLEFPTKEEREEIELSAKYWEDNATITINAHFLVRDLKSDEEDRNLIKLRTEI
                     VTFATAKNILFTIRYNEFSTFEEIQARILASPKNFEDGFDIIDKMFEVRVEKDADLLE
                     WIDKEARRLRTSVLEKKDEYSYDEMLKDISSLQELNMRVRDSLFDKRRAMTSLLKSDK
                     IDKDIKQNLTIVLKDLNSLVEFSVSQLNILDNIQTILASQINIEQNKIIKIFTVATVA
                     MMPPTLIGTVYGMNFKFMPELELHYAYPIVLGVMVISIILPLVVFKKKGWL"
     gene            8343..8885
                     /gene="mog"
                     /locus_tag="RJ336_000794"
     CDS             8343..8885
                     /gene="mog"
                     /locus_tag="RJ336_000794"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HDZ5213253.1"
                     /translation="MDTINIGVLTLSDRASSGIYEDKATAEIERVLNSYIKNDIIYHK
                     ELIPDDYDLIIKKLLYLADEKKCDLIVTSGGTGPALRDVTPEATEAVCDKMMPGFGEL
                     MRLESLKYVPTAILSRQSAGIRNKSFIINLPGNPKAIKECLEPVFPAIPYCIDLIEGA
                     YIEANDEVIKVFRPKKKCQN"
     gene            complement(8882..9067)
                     /locus_tag="RJ336_000795"
     CDS             complement(8882..9067)
                     /locus_tag="RJ336_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein"
                     /protein_id="HDZ5213254.1"
                     /translation="MFFKKKISQKQKEKPKIPINDVILDDRLCKFKNKVQKISKDEAS
                     ASLLARQLSRLVRANKF"
     gene            9194..10381
                     /locus_tag="RJ336_000796"
     CDS             9194..10381
                     /locus_tag="RJ336_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDZ5213255.1"
                     /translation="MTLIAILCLYTALLSWISYAQIRFLEREKDKQAQILSEKDYQNA
                     ADIAIENEKFKLFSNFYNLIINIAWIGFGFLYLKELLISSNTRFENTLFLLSFLIITS
                     ILNLPLSIYKSFIKDKAHGFSNMTVKLFIKDTMKSLILTLIFGFLILYALLFCYDFFG
                     TFWWIAAFIFAFCIIVIINLIYPTLIAPIFNKMKKLDDENLLKKISSLMKQCGFSANG
                     VYVIDASKRDKRLNAYFGGLFKSKRVVLFDTLLKALNERELLAVLGHELGHFVHKDII
                     KALFNGAITMFLLFFVFANLPEFVYLESHLEGVNGGVFALLFILANIFSFLISPMLNA
                     LSRKNEFAADQHGAKVTSKEDMKNALIALARENKAFIKTSKIYTFFYLSHPSISDRIK
                     ALS"
     gene            10378..11193
                     /locus_tag="RJ336_000797"
     CDS             10378..11193
                     /locus_tag="RJ336_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDZ5213256.1"
                     /translation="MTIKNALMEAKSSLKGYENEAVFILCEYLKKDKAWLFLNQDIQI
                     DHEPYFELIKRFKSGEPFEYIFEKVDFWGLEFKIKKGVLIPRYDSEILLFQILNLCKK
                     NTFNGILEIGFGSGILSIVLAKELGLKITACDINPKALELALENAKLHKVDHLIDFKL
                     CNFKQIKENYDFIFSNPPYIKNSYPIDIWVQKEPKEALFGGEKGYEILEEIIHFSLDK
                     KVKFLACEFGYDQKEILEKILYQNNFIVDFFKDEQDYNRAFIAKFTNMRYDKK"
     gene            11206..11676
                     /locus_tag="RJ336_000798"
     CDS             11206..11676
                     /locus_tag="RJ336_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HDZ5213257.1"
                     /translation="MKAVNLFLLASIIGVELILGIVVAPTIFFPQNLIGEGVLSHFQS
                     GLMMTQIFIKMGYLLIFVSVVNFLYEIYSLIKDEMKFQIKFSKFMLSLLILILSLIFV
                     FYFTNTIIELQNLGENATKTQEFISIHNASEVVIKIILIMQVFLYFLSFKIAKK"
     gene            11714..12463
                     /gene="flaC"
                     /locus_tag="RJ336_000799"
     CDS             11714..12463
                     /gene="flaC"
                     /locus_tag="RJ336_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin C"
                     /protein_id="HDZ5213258.1"
                     /translation="MMISDATMMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLA
                     IADSLRSQSSTIDQGVANAYDAIGVLQIADASLTNISQSADRLNELSVKMNNAALNDS
                     QKGMLRTEATRIQESINDSFNNATYNGKNVFQTMNFVVGSGTETTNLNPLATGGLSID
                     NQDSITNFMDQLGSLRSEIGSGINAITSNINASVQNSINSKAAENNLLNNDMAKNVND
                     FNANYLKENAAAFVAAQSNMQLQSKIANLLQ"
     gene            12499..13131
                     /locus_tag="RJ336_000800"
     CDS             12499..13131
                     /locus_tag="RJ336_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDZ5213259.1"
                     /translation="MTLEQILEKTKNVRLVAASKYVDASTIEKLFDQGIVEFGENQVQ
                     ALAQKKENLDEKKLDIKWHFIGTLQSNKINLLIKQKPILWHSCNGIKIAKAMDKRLDY
                     KLNTLLEINSANENSKSGLDPNQAVEEYLQIQEECSNLNLCGVMSIGSHSQDKESIIK
                     SFETTFKIYEILQKHGAKICSMGMSNDFEIAIKCGSNLVRLGSILFKNLK"
     gene            complement(13144..16746)
                     /gene="dnaE"
                     /locus_tag="RJ336_000801"
     CDS             complement(13144..16746)
                     /gene="dnaE"
                     /locus_tag="RJ336_000801"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDZ5213260.1"
                     /translation="MSQFTHLHLHTEYSLLDGANKLKELALTLKEQGATSVAMTDHGN
                     MFGAIDFYQTMKAQGLKPIIGMEAYLHNHDELDDKSSRQRFHLCLYAKNEIGYQNLMY
                     LSSQSYIKGLYYYPRINKKLLEDHSEGLICSSACLQGEVNWHLNTYSERNVRFGAKGY
                     EAAKEAALWYKKVFKDDFYFEIMRHGIGDQRMIDDDIIRLSKELNIKIIATNDTHYTF
                     KERAAAHEVFMCIAMGKKLNDPDRMRHSVHEFYVKSPEQMSELFADIPEAIENTQEIA
                     QKCNLELNLGNPTPPNFKFTREYAKDHNITLPEETKEFSFDNDDIVFEELCKKGLEER
                     LKFIDESKHEEYKQRLEVEINIIKNMKFSGYMLIVHDFIKVAKDKGIPVGPGRGSAAG
                     SLVSYCLRITDLDPIPYSLLFERFLNPERVSMPDIDVDFCQDRRAEVIDYVIDKYGAD
                     KVAQVITFGKLLAKGVIRDVARVCDMSIQDADELAKLVPEELKITLDAAYEKEPKIKE
                     FIDRHPKGPEVWEYARALEGLNRNAGMHAAGVVISNESLWKKTPLFRQSKNDERHLVT
                     QYSKDHLEDVDLIKFDFLGLKTLTVINNAIKLIKKRYNKDIIWETIDVNDSKVYKTIQ
                     SGNTLGIFQIESGGMQSLNARLKPERFEDIIAVLALYRPGPMESGMLDDFIDRKHGLK
                     SIEYPFDSLEKVLEPTYGVIVYQEQVMQIVQIIGGFSLGGADVVRRAMGKKDPEKMKK
                     LKTDFADGAEKQGYDRAKAEDLWELIVKFAGYGFNKSHSAAYALITFQTAYLKTYYPS
                     EFMAALLTSEENNVDKIAVYIDEMKKMNIKLLPPSINKAIREFSALEQDGKDAIIYGL
                     GAIKSVGIPAVENLLEARQDGEFKDINDFLGKIDPTKINRRTLESLIKAGAFDEFGFT
                     RKALFDNMENLSEASRKMAEVRKNAASSLFGEEELTSGVQVNFTPKNEEFEVMEKLGY
                     EKEILGIYVSGHPLDRFYEQINAIDYVKSLDFESLKNNGEILSIGKIEDFKSMMSKNN
                     KRYGRIEILDYYSSFDATVFESNVEEIENIIKDENLKNNAYGFVLGFKAEGGEKPSFF
                     LKAIKDLQSLEDGEIKAIKKFGAKKDFKNKEENHFTAEPKEFEKNIIELDLTRLNREL
                     IYEIHEIARNAHNPNEKNNKKLVLKVISAGSCLLYHTDFIISDSIVEEISNKYA"
     gene            16965..17171
                     /locus_tag="RJ336_000802"
                     /pseudo
     CDS             16965..17171
                     /locus_tag="RJ336_000802"
                     /inference="COORDINATES: protein motif:HMM:TIGR02174.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SelT/SelW/SelH family protein"
     gene            complement(17184..17513)
                     /locus_tag="RJ336_000803"
     CDS             complement(17184..17513)
                     /locus_tag="RJ336_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family transcriptional regulator"
                     /protein_id="HDZ5213261.1"
                     /translation="MKLYGIKNCNSVKKAMDALTQKGIVFDFMDIKKINQDILYTWLK
                     QKSFEELINTAGLTSKKLGLNKEKVKNLNEKELEKIVLENPSCIKRPIIEYEQNIYIG
                     KEYEKML"
     gene            complement(17510..18850)
                     /locus_tag="RJ336_000804"
     CDS             complement(17510..18850)
                     /locus_tag="RJ336_000804"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HDZ5213262.1"
                     /translation="MWTKNSWKNYPIKQQPIYPDQEEMNRVLARLEKLPPLVFAGEVR
                     NLQKSLARVCKKEAFLLQGGDCAESFENFGAVNIRDMFKILLQMAIVLTFAGGCPVVK
                     IGRIAGQFAKPRSSDFEELNGISLPSYRGDIINGFEFSEQARIPDPHRMLEAYYQSAT
                     TLNLLRGFAKGGLADLHEVHRWNLGFLKKSELHKQYTDISEKISQALAFMEACGINTS
                     NTPSLREVSVYTSHEALLLPYEEALTRVDSLSGEIYDCSAHMLWIGERTRALDEAHVH
                     FLRGVKNPLGVKIGPSASADDIIALANVLNPNNEEGRLNIIIRMGADKIINNLPKIFS
                     KLKSEGLNLVYSIDPMHGNTVKAGNFKTREFDKIMQEVRSFFEIAISEGVYPGGVHLE
                     MTGKDVTECTGGASNVTAQSLEDRYETQCDPRLNADQALELAFLIADLVKKARK"
     gene            complement(18874..19287)
                     /gene="uraH"
                     /locus_tag="RJ336_000805"
     CDS             complement(18874..19287)
                     /gene="uraH"
                     /locus_tag="RJ336_000805"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HDZ5213263.1"
                     /translation="MFSIKKTLLILASVPMFLSATEYQLSTHVLDITSGQPAPKVKVE
                     LYKLEANQQWKKVSEEFTEENGRIGDLLPYEKAENRAFGIYKLKFFTKDYYTSHKINT
                     FYPFVEVSFELSKDQKHYHVPITLSPFGYSTYRGS"
BASE COUNT         6800 a         3275 c         2609 g         6642 t
ORIGIN      
        1 aaggaaaaaa atgaaaaaaa tattaagcat tgctctagtt gctttagttg gtttattttt
       61 aggtgcttgt agtgattcta aaaataaaga atcaaatgca agtgtagaat taaaggttgg
      121 aactgctcca aattataaac cttttaatta taaagaaaac tcaaaactta caggttttga
      181 tactgatttg gttgaagaga ttgccaaaaa aaatggtatt aaaattgttt gggttgaaac
      241 caatttcgat ggattgattc ctgctttaaa agctggcaaa atcgatatga ttgcctcagc
      301 tatgagcgca actgatgaaa gaagacaaag tgttgatttt acgaaacctt actatatgag
      361 taaaaatctt tatcttaagc taaaaaacaa cgactctctt caaacaaaaa atgatttaga
      421 aggcaaaaaa ataggagttc aattaggaac tttacaagaa aatactgcaa aagctatcaa
      481 aaatgcacaa gtacaaagca ataaagattt aaacatagct gttttagcac taaaaaacaa
      541 caaaatcgat gctattgtag ctgatcaaga tactgctaaa ggttttttag ctgaaaatcc
      601 agaattggta agtttctacc aagaaacaga tggaggagaa ggctttagtt ttgcttttga
      661 taaaaataaa caaaaagata ttattgaaat atttaacaaa ggcatagatg aagcaaaaac
      721 tgatggattt tatgatactt taattaaaaa atatgaatta gaataagcgt gaattttcac
      781 gcttatagct taaaaagtta aaatttcata ttttctctct tttgcaattt ttaaaatttt
      841 ttcatcacca ttacatacaa aggctttgct aacagactct agtaaaggta aatcattgat
      901 agaatcacta aaaaaataag aatctttcat ccatttttca taatctttac ccaaatattc
      961 cttaagtctt aaaaccttgc cttccttaaa gctataaatc ccataagctt ttccactaaa
     1021 tttatcaccc acacgctcgc attttatggc tatgctttct ctcactccca aaaaagaggc
     1081 gatttttcta actaaaaatt cagccgtagc tgaaattata atacaccttt gatcttgata
     1141 tttgattata agttctttag ctttttcata aggttttata taaattttta taaattcatc
     1201 tactaaagat gaaattctat cttcattttt acccttaaca ctttgaagaa aaaaagtcat
     1261 aaattcatcc atatcaagct ttttttcttg atattgtttt tgataaaaaa caattttttc
     1321 taaatattct tgaggtaaaa aacctttttc aacacaaaat ttaagccaaa gtttagcact
     1381 atcgccttgt attaaagtat catctaaatc aaataaaaca agcttcattt taactctttt
     1441 gctaaagaaa gattgaattt taaagcgatt ttatcaccta cttcataagt actatgagtg
     1501 ctaaaattta aagtatctac cttaaattca atttcttgca ctctaaccct atagcgtatg
     1561 atattaccta gcaatgattt ttctttgatc ttagcctcta agccttcgtt agaaatttct
     1621 atggtttcag gacgcaaggc tatatctttt ttaaaatcgt gttttaaacc caagctatca
     1681 agctctttag ggcttaaaat attgtaattt cctataaagc tagccacaaa atgagattct
     1741 ggcaaaagat aaagattgtt tgcgttggaa ttttgtatga ttttaccctc attcattaaa
     1801 ataatcctat cggataactc taaagcttct tcttgatcat gcgttacaaa aatagtggtg
     1861 agttcaagtt ctttttgaat ttctttaatt tgcaccctta aatgcttacg aattttagca
     1921 tcaagtgccg ataaaggctc atcaagcaaa agtaaatcag gtttagtcac caaagatctt
     1981 gctaaagcca ctctttgcat ttgtccgcct gaaagcttat gtggataagt tttagcgtat
     2041 tcttcaagct cgacgagttt taacattttt ttcactcttt tttctatgtc ctttttatcc
     2101 atttttttga tctttaaacc aaaagctaca ttttcaaaaa cgttaagatt tggaaaaaga
     2161 gcgtaatttt gaaaaaccat acctatattt cttttttgag gacttaattt agtaagatct
     2221 ttatcattta aagaaatttt tcctccatta atttggctaa gccctgctat acaccttaaa
     2281 agagtggatt ttccacagcc acttgggccc aaaagggtta taaactcacc ctttttagca
     2341 ctaaaattaa tatcttcaaa aataatttta cccccataag cttttttaaa atttttaatc
     2401 tttaaataag ccatttttta ctccttaatc aaactagcta taaaagttgt tataaaaatt
     2461 aacacaaaat aaactattac caaagcacta gaataatgcc cactttgatt tttgatatta
     2521 taaagataaa cttgcaaagt ctcataagca cttcctacaa gaatatttgc gtataaaaat
     2581 tcgcctatta aaaaagaaaa acttaaaaaa actgccacca aaattccatt tcttaaatta
     2641 ggcaagacaa gcttaaaaat cgctcccatt aaagaacctc caagcatagc attagatgcg
     2701 atgagttcat ttaaattgac attagacata gcattatcta aagccctata tataaaaggc
     2761 aaagctatag taaaataagt aaaaatgagt atccaagctg tgcctcctat attgtcagca
     2821 taaagttgca aaagccccac acagctaact ataggaggta cagcaaaagg catgataata
     2881 agtatattta caaaggcttt taattttaaa aaataataat ttagcacaaa aaccaaagga
     2941 aaaacaagaa tcacagaaag taaaatactg cccacacaaa caagcaaaga atgccaaaga
     3001 gcaagtaaaa atctttcgtc atgaaaaagt tcttgatacc atttaagcgt aagatcatca
     3061 ggcaaaacac ttacacccca agaagtggaa atagaatata aaaaagtagc cattaaaggc
     3121 aaagctaaaa acaaaaaaac caaaaacaaa actacataat gataaatttt agcttttaaa
     3181 ctcaaatttt cattcattta aagcacctta aaattatatt ttttagaaag gaaattggct
     3241 ataaaggtaa caacaagcat gataatagtt ataatgatac ttaaagcact agccatataa
     3301 ggatcaagat tgatatcgcc tgcgattaaa gcagcgattc ttacaggagc gacattaaaa
     3361 tttcccgaac ttaaagcata aatagtcgca taagctccaa aagcattggc aaataaaatc
     3421 acaaaaacac caaacaaagt aggagcgagc aaaggcaaag ctatttttaa ccaatataaa
     3481 aaattgcctc cacctaacat tttacaagca tttaaatgtg aattttcaag acttttaaaa
     3541 gctggaagca aaagcaagat cgccaaagga atttgaaaat acacataaac aatatttacc
     3601 ccgaaattag cataaacact aacaaaaggc tctataccta aattcttcaa aaacacatta
     3661 actacaccat tgcttccaag aactataatg aaagcaaaag ctaaaggaac tcctgaaaaa
     3721 ttacttatca tagtatttaa agaaaagaga aaattacata tttttgatgg agctaaaata
     3781 aataaagaat agctcgccaa aagccctatt aaaagtccaa aaatactaga aataaaactg
     3841 atttgtaaag aatttataat gctttgtaga tagaatttgg actcaaaaat atgtataaaa
     3901 ttggctaaag aataaatttc atcctcttct acataaaaag cattaaaaac aatccaaatc
     3961 aaaggtgcta tcataaaaaa agtaaaaact ataaaaaaag gtaaaatact taaaaaggct
     4021 agaaattttt ctttcatttt ttggccttta aaatttcatc attatatctc ttatcgtgtt
     4081 taagtcctaa aatttcacag atactgccac aaatttcatc ctgttttatc ttggcatttt
     4141 catacgaaaa agcactacca aaagtgaaaa aaggcactaa aatttcatct tcgcttaagc
     4201 ctccatgact tttaccctct gtcataccat gatcgcttgt gatgattaca ttaatacctt
     4261 gttctaacca agtgggcaaa tactcagaaa tcaaaacatc aacttttttg gttttattag
     4321 catactcaat agagtgtgag ccaaatttat gtcctgcatc atctatattc atagaatgta
     4381 taagagtaaa atctaaatta tatttgtttc ttaaatgctc cccatctgca aataaatgag
     4441 aatctaaata atcatcttca taataaaaat gtccataagg caaagttaaa ttttcatctt
     4501 ctatatggcg atgtaaagaa ggaataaatt cttttttatt ataaagctca aaaacccaat
     4561 gataagccgc acttccagct tttaagcctt gttctttgca aaggtcaaaa atgcttgttt
     4621 gttttgaaaa actcaattta ttattaatta tcccacttaa aacaggcttt acgcctgtta
     4681 ataagcactc gtataaagga cgagacatac taggaagttc gcattctaaa gaataaaatt
     4741 tgcccaaatt ctctttgcaa agcgcattta aatatcccat atttatacta gcgcttttac
     4801 aatttaagcc atcaagcaca actaaaataa ctttggacat catttactct ttaaaaaatc
     4861 ttttacttca agtaaaataa attcattatc atcactctta ttaggttctc tgcttgaaga
     4921 ataaggaaag ttattgtcat tttctacaac tatatgagag tcatctacta tatccacacc
     4981 ttctatggtt tcaaaaggaa aaacaaattt atcatttact aaaggctttt tagaaatttt
     5041 atttctatcc ttaatattta aaagatctat ataagaaatt ttttgagctt catgagtttt
     5101 atcatctaat ttaaccttat aaattctttt aaattgagct acattattaa aacaatgctt
     5161 agtatcttca ccttctttgc aagccttatc tttagtgcct tctttttgat ctctttctat
     5221 gatgatgccg tatttatcat ctatcatatt aaaatcacct atggaatggc ttttatcttc
     5281 taagaaatat ttataagttt ttccggtgaa ttttttattt tttacatcaa attctatgat
     5341 tcttagatat tctttacctt tttcattctc ataagcgttg ttattgtaaa tgcttccttc
     5401 taaaagcaaa taaagtttag aaccatcttt agagcttgcc atagcttcaa agcctttaga
     5461 acgcttgata ttaaatttct cattttctcc atcaggctta tcgctaaatt ttaaatttgg
     5521 attatcagga gaaataagtt ttttaccctc cacatacaca tcaaaaactt cttttaaatt
     5581 cccattctta tcaaaatgaa gcaaataagg accaaattca tcacctatat aaaattcatc
     5641 attgataagc tgtatactct cagtatcaaa atcagcccca cttaaatacc tttctttggt
     5701 tgtttcggtg gttataggat aagggtattt tttatcacta tctttaaaaa aaactgtttt
     5761 taaaagttcg tattttgagt ttttaaaatc aaatttaaac tcgtgagcat aaagcatagc
     5821 atcataagaa ttatactttt tacccaagcc attatcacta atcacccaaa aaacatcttt
     5881 ttttggaata tattttatcc cactatgtcc ttgtataggt tgatttttaa aaggtaaata
     5941 aaaatctgtt tccctgtttc ccttagattt aaaagttcca attttttctt ctctagtgat
     6001 atttgcaaat ttcccataag ttttaaaaaa atcaggagca tccttaggag gttttactgt
     6061 acttttagaa tctatgataa tatgccctgc taaattggcc tcatgctctt gaattccaaa
     6121 taaaacactg caaagcatag cacttgttaa aataaccttt ttcatccaat ctcctttatt
     6181 tcatatccac tataactttt tcttgccaaa gttgtggcaa ttctttagcg cttttttccc
     6241 aagctttttg atctttgatt gctcttgcat tttcgtattg ctcacttggt aaaagtttag
     6301 cttttatatc atctggcaag gtaatatgat caattcttat tggccttgca taaccttttg
     6361 ctagattgat ttgtccttta tcagaaagta taaactcacg agctaattta gccgcatttg
     6421 gatgttttgc gtatttattg ataatagttg tatagcccga aataacacta ccatcagcag
     6481 ggattaaaac ttcataacga tctttgccca ctttatctct atagcctaaa ccattaaaat
     6541 cccaaactaa acccacttca acttcacctt tttcaagatt agctatgctt acatcattat
     6601 ttacaagtct tccttgtttg gctaaagtat taaaaaaagc taaagcagga cttaaatctt
     6661 tttcatcccc acttaaggca taattagctg ccaaaactgc actcacagct tgagctgcta
     6721 cacttacatc acccacggta attttataat ttcccttaag caaatcttgc caagttttag
     6781 gtatatcttt tactacatct ttattgacta taaaagctat ggttcctgta taagctaaaa
     6841 gccaatttcc atctttatct ttagcccaag ttggaatttg atcccagtag cttgtcttaa
     6901 aaggctgagc tactccttgt ttaaccgcta tctctccaaa agaagctcct acatccccta
     6961 tatcaccgct tgcatttttc ttttcggctt taaatttagc aatttcttga gctgaactca
     7021 tatctgtatc actatgttct atgccataaa gatttttaag atctgcccaa gtatccttcc
     7081 agtttgccca agtatcaggc atagctaaag aatttaccct accttctgct tgcacagctt
     7141 taatcaaatt ctcatcaata gcttgtgaat ttgaaaacaa taagacaaca agacctaaac
     7201 ttaagaaaaa tttcttactc atttttttcc tttcaaaaaa tattttggaa atttaatgag
     7261 ttttagaaac attttagaaa caagttaatt tttaagcaaa caaggttata attttaaagt
     7321 cataaacaag gagcgatcat gctttatatt tatatcaaaa ctcaaaatgc tttagttcaa
     7381 agaatcaatt ttaatctcga tagtcaagaa ctaccacaaa atattttatg gattgattta
     7441 cttcatccaa gtgcagcaga aattgctttt atatcaagtg aatttaatct tgagtttcct
     7501 acaaaagaag aaagggaaga aatagagctt agcgcaaaat attgggaaga taatgcgaca
     7561 ataaccatca atgctcattt tttagtaaga gatcttaaaa gcgatgaaga agataggaat
     7621 ttaatcaagc ttcgcacaga aattgttact tttgctaccg ctaaaaatat cttatttact
     7681 ataagatata acgaatttag cacttttgaa gaaattcaag caaggatttt agctagtccg
     7741 aagaattttg aagatggttt tgatattatt gataaaatgt ttgaagtgcg tgttgaaaaa
     7801 gatgcggatt tactagaatg gatagataaa gaagcaagac gcttaagaac aagtgtttta
     7861 gaaaaaaaag atgaatatag ttatgatgaa atgctaaagg atatttcaag tttacaagag
     7921 cttaatatgc gggtaagaga ttctttgttt gataagcgtc gcgctatgac ttctttgcta
     7981 aaaagcgata aaatcgataa agatataaaa caaaatctca ctatagtttt aaaagactta
     8041 aattctttgg ttgaatttag tgtttcacaa cttaatatct tagataatat ccaaaccatt
     8101 ttagccagcc aaatcaacat agaacaaaac aaaatcatta aaattttcac cgttgcaact
     8161 gttgccatga tgccacctac tttaatagga actgtttatg gtatgaattt taaattcatg
     8221 cccgaacttg aacttcacta tgcttatccc atagtgcttg gcgtgatggt aatttctatc
     8281 attttacctt tggttgtttt caagaaaaaa ggatggttat aaaaatttat taaggagaaa
     8341 caatggatac aataaacata ggagttttga ccctaagcga tagagcaagt agtggtatat
     8401 acgaagataa agccactgct gaaattgaaa gagtgttaaa ttcatatata aaaaatgata
     8461 ttatttatca taaagaatta atccctgatg attatgattt gatcattaaa aaattacttt
     8521 atctagcaga tgaaaaaaaa tgcgatttga ttgttacaag cggaggtaca ggtccagcac
     8581 ttcgtgatgt aaccccagaa gccacggaag ccgtgtgtga taaaatgatg ccaggttttg
     8641 gagaacttat gcgcttagaa agtttaaaat atgtcccaac agctatactt tcaagacaga
     8701 gtgcaggaat tcgcaataaa tcttttatca ttaatttacc aggaaatcct aaggctataa
     8761 aagaatgcct agagcctgtt tttccagcta taccttactg tatcgatttg atagaaggtg
     8821 cttatataga agcaaatgat gaagttatta aggtttttcg tcctaagaaa aaatgtcaaa
     8881 attaaaattt attagcccta acaagtctgc ttaattgtct agcaagtaga cttgctgaag
     8941 cttcatcttt gcttatcttt tgtactttat ttttaaactt acaaagcctg tcatctaaaa
     9001 tcacatcatt gatcggaatt ttaggctttt ctttttgctt ttgtgaaatc tttttcttaa
     9061 aaaacattct ttaatccttt tttataaata tacatcaact tagttgaaaa gaatattatt
     9121 ttagatttta aactattaac tttatttcat tattttaagc tagaattcga aaaaaaccaa
     9181 tcaaggaaaa ataatgactt taattgcaat tttatgtctt tacacagcgc ttttatcttg
     9241 gatttcctat gctcaaattc gtttcttaga aagagaaaaa gacaaacaag ctcaaatttt
     9301 aagcgaaaaa gactatcaaa atgcagcaga tattgccatc gaaaatgaaa aatttaaact
     9361 attttccaat ttttataatt taatcatcaa tattgcatgg ataggttttg gatttttata
     9421 tcttaaagaa ttgcttatct caagcaacac tcgttttgaa aatactttat ttttattatc
     9481 ttttttaata atcacaagta ttttaaatct acctttaagt atttataaaa gttttatcaa
     9541 agataaagcc catggttttt caaatatgac tgtaaaactt tttatcaaag atactatgaa
     9601 aagtcttatt ttaactttaa tatttggatt tttaatcctt tatgctttgc ttttttgcta
     9661 tgattttttt ggaacttttt ggtggattgc ggcctttatt tttgcctttt gtattatagt
     9721 gattataaat ctcatctacc ctaccttgat agcacctatt tttaataaaa tgaaaaaact
     9781 agacgatgaa aatttattga aaaaaatcag ctctttaatg aaacaatgcg ggtttagtgc
     9841 aaatggggtt tatgttattg atgcaagcaa aagagataag cgtttaaatg cttattttgg
     9901 tggacttttt aaaagcaaaa gagtggtgct ttttgataca ttattaaaag ccttaaatga
     9961 aagagaactt ttagctgttt taggacatga gcttggacat tttgttcata aggatattat
    10021 caaagcttta tttaacggcg ctataactat gtttttactt ttttttgttt ttgcaaattt
    10081 acctgaattt gtttacttag aaagtcatct agaaggagta aatggtggcg tgtttgctct
    10141 tttatttatc ttggcaaata tttttagctt tttaatctct cctatgctta atgccttaag
    10201 tagaaaaaat gaatttgcag ctgatcaaca cggagctaaa gttacaagca aagaagatat
    10261 gaaaaatgca ttgatagctc tagcaagaga aaataaagct tttatcaaaa caagtaaaat
    10321 atatacattt ttttatctca gccatccaag tattagtgat agaatcaagg ctctttcttg
    10381 actataaaaa atgctcttat ggaagctaaa tctagcttaa aaggttatga aaatgaagca
    10441 gtatttatac tctgtgaata tctaaaaaaa gataaagctt ggttattttt aaaccaagat
    10501 atacaaatag atcatgaacc ttattttgag cttataaagc gttttaaatc tggagaacct
    10561 tttgaatata tatttgaaaa agtggatttt tggggcttag aatttaagat aaaaaaaggc
    10621 gttctaatcc ctcgctacga tagtgaaatt ttactttttc aaattttaaa tttatgcaaa
    10681 aaaaatactt ttaatgggat tttagaaata ggatttggaa gcggaatttt aagcattgtt
    10741 ttagccaaag aacttgggtt aaaaatcaca gcctgtgata tcaatcccaa agccttagaa
    10801 ttagctttag agaatgccaa attacacaaa gtcgatcact tgattgactt taaactttgt
    10861 aattttaagc aaattaaaga aaattatgat tttatttttt caaatccacc ctatattaaa
    10921 aattcatatc ctatagatat ttgggtgcaa aaagaaccca aagaggcttt atttggtgga
    10981 gaaaaaggat atgaaattct agaagaaatc atacattttt cccttgataa aaaagttaaa
    11041 tttttagctt gcgaatttgg ctatgatcaa aaagaaattt tggaaaaaat tttatatcaa
    11101 aataatttca ttgttgattt cttcaaagat gaacaagatt ataatcgtgc ttttatagct
    11161 aaatttacaa atatgcgcta tgataaaaaa taaaaggaga aactcttgaa agctgttaat
    11221 ttatttttac ttgcctccat cataggggtt gaactcatac taggaatagt tgttgcacca
    11281 acaatttttt ttcctcaaaa tcttatagga gaaggagtgt tgagccattt tcaaagtggc
    11341 ttaatgatga cgcaaatttt tattaagatg ggatatttgc tgatttttgt ttcagtggtt
    11401 aattttttat atgaaattta ttctcttata aaagatgaaa tgaaatttca aataaaattt
    11461 tcaaaattta tgctgagttt gcttattttg attttaagct taatatttgt tttttatttt
    11521 actaatacca taattgaact ccaaaactta ggcgaaaacg ctacaaaaac tcaagaattt
    11581 atcagtatcc ataatgcaag tgaagtggtg attaaaatca tcttgataat gcaagttttt
    11641 ttatatttct taagctttaa aatagcaaaa aaatgataaa atataaataa atccgaaaga
    11701 gaaggagtag gccatgatga tctctgatgc aactatgatg caacaaaatt attatttaaa
    11761 caatgcacaa aaagctagtg ataaagcttt agaaaatatt gcagctgttc gcgcaataag
    11821 tggagttgat agtgctaatt tagctattgc tgattcttta agatctcaat caagcactat
    11881 agatcaaggt gtcgcaaatg cttatgatgc tataggggtt ttacaaattg cagatgctag
    11941 ccttaccaat atctctcaaa gcgcagatag acttaatgaa ctttcagtga aaatgaacaa
    12001 tgctgcactt aatgattctc aaaaaggaat gctaagaaca gaagcaacac gcatacaaga
    12061 atccatcaat gattctttta ataatgcaac ttataatgga aaaaatgtct ttcaaactat
    12121 gaattttgta gtaggtagcg gaactgaaac tacaaattta aatccattag caacaggtgg
    12181 attaagcata gataatcaag atagtattac aaattttatg gatcaacttg gaagtttaag
    12241 aagtgaaata ggctcgggta tcaatgccat cacatcaaat attaacgcaa gtgttcaaaa
    12301 tagcatcaac tcaaaagcag ctgaaaataa tttactaaat aatgatatgg caaaaaatgt
    12361 taatgatttt aatgccaatt atctaaaaga aaatgctgct gcttttgttg ctgcgcaatc
    12421 caacatgcag cttcaaagca aaattgctaa tttattacaa taatataagc cctaaatagg
    12481 gcttatttct ttatcaaaat gactttagag caaattttag aaaaaaccaa aaacgttcgt
    12541 cttgtagccg caagcaagta tgtcgatgca agtacaattg aaaagctttt tgatcaaggt
    12601 atagtagaat ttggagaaaa tcaagtccaa gctctagcac aaaaaaaaga aaatcttgat
    12661 gaaaaaaaac tagacataaa gtggcatttt ataggaacgc tacaaagcaa caaaatcaat
    12721 ctcttaatca aacaaaaacc tatattatgg cactcttgta atggtattaa aatagctaaa
    12781 gctatggaca aaagacttga ttataaatta aatactttat tagaaatcaa tagtgcaaat
    12841 gaaaatagca aaagcggtct agatccaaat caagctgtag aagaatattt acaaatacaa
    12901 gaagaatgct ctaatctaaa tctttgtggc gtaatgagca taggatcaca cagccaagat
    12961 aaagaaagta ttatcaaaag ctttgaaact acatttaaaa tttatgaaat tcttcaaaaa
    13021 catggggcta aaatttgctc tatggggatg agtaatgatt ttgaaattgc tataaaatgc
    13081 ggatccaact tagtaagact tggaagcatt ttatttaaaa atcttaagta agaacaatct
    13141 tacttaagca tatttattag aaatttcctc tactatacta tcagagataa taaaatctgt
    13201 atgataaagc aagcaagatc ccgcgctaat aacttttaaa acaagttttt tattgttttt
    13261 ttcattagga ttatgtgcat ttctagcaat ttcatgaatt tcatagatta attctctatt
    13321 taaccttgtc aaatctagct ctatgatatt tttttcaaat tccttaggtt ctgcggtaaa
    13381 atgattttct tctttatttt tgaaatcttt ttttgctcca aattttttta tagctttaat
    13441 ctcgccatct tcaagacttt gtaaatcttt aattgctttt aaaaaaaagc taggcttctc
    13501 ccctccctca gctttaaatc ccaatacaaa accataggca ttatttttta aattttcatc
    13561 tttgatgata ttttctattt cttctacatt gctttcaaat acagtagcat caaacgaaga
    13621 ataataatcc aaaatttcaa ttctaccata acgcttatta tttttactca tcatggattt
    13681 gaaatcttca attttaccta tacttaaaat ttctccattg ttttttaaac tttcaaaatc
    13741 taaactttta acataatcta tggcattaat ttgttcataa aatcgatcta aaggatggcc
    13801 tgaaacataa attcctaaaa tttctttttc atatcctaat ttttccatca cttcaaattc
    13861 ttcatttttg ggagtaaaat ttacttgaac acctgaagtt aattcctctt caccaaaaag
    13921 agaacttgca gcattttttc ttacttcagc catcttacgc gatgcttcgc taagattttc
    13981 catattatca aacaaagctt ttctcgtaaa accaaactca tcaaaagccc ctgccttaat
    14041 aagactttct aatgttctgc ggtttatctt ggtaggatct atcttaccta agaaatcatt
    14101 aatatcctta aattctccat cttgtcttgc ttcaagtaaa ttttcaactg caggaatacc
    14161 cacacttttt atagccccaa gtccgtatat aatagcatcc ttgccatctt gctctaaagc
    14221 actaaattca cggatcgctt tgttaatcga tggaggtaaa agtttaatat tcattttttt
    14281 catctcatca atataaacag caattttatc cacattgttt tcttcgcttg ttaaaagcgc
    14341 tgccataaat tcactaggat aataagtttt taaataagct gtttgaaaag taatcaacgc
    14401 ataagccgca gagtgagatt tattaaaacc atatcctgca aattttacga taagctccca
    14461 taaatcctca gcttttgctc tatcatatcc ttgtttttct gctccatctg caaaatcagt
    14521 tttaagcttt ttcatcttct caggatcttt tttacccata gcacgacgca ctacatcagc
    14581 acctcctaaa gaaaagccac ctataatttg aacaatttgc ataacctgtt cttgataaac
    14641 aataacccca taagtaggct ctaaaacctt ttctaaactg tcaaaaggat attctatact
    14701 ttttaaacca tgctttctgt cgataaaatc atcaagcatt cctgattcca taggacctgg
    14761 acgataaagc gcaagaaccg caatgatatc ttcaaaacgc tctggtttta agcgtgcatt
    14821 taaactttgc ataccgcctg attcgatttg aaaaattccc aaagtatttc cactttgtat
    14881 ggttttataa actttgctat catttacatc tatagtttcc caaataatgt ctttattgta
    14941 acgcttttta ataagcttga tcgcattatt gattactgtt aaggttttaa gacctaaaaa
    15001 gtcaaatttt atcaaatcca catcttctaa atgatcttta gaatactgcg ttaccaaatg
    15061 tctttcatca tttttacttt gtctaaaaag cggagttttc ttccataaac tttcattaga
    15121 aattacaaca cctgctgcgt gcatacccgc attgcgattt aatccttcta aagctcttgc
    15181 atactcccaa acttcaggac ctttaggatg acgatcgata aattctttaa ttttaggttc
    15241 tttttcataa gcagcatcaa gagtgatttt aagctcttcg ggcacaagtt tagcaagctc
    15301 atcagcatct tgaatactca tatcacaaac tctagccaca tcacgaatca cccctttagc
    15361 caaaagttta ccaaaggtaa tcacctgtgc aactttatct gctccatatt tatcaatcac
    15421 atagtcaatc acttcagcac gtctgtcttg acaaaaatcc acatcaatat caggcatgct
    15481 cacacgctca ggatttaaaa aacgctcaaa aagtagacta taaggaatag gatctaaatc
    15541 cgtaatcctt aaacaataag aaaccaaact tcctgcagct gatcctcttc cagggcctac
    15601 tggaatacct ttatctttag ccactttaat aaaatcatga acaataagca tataacctga
    15661 aaatttcata tttttaatga tgttaatttc tacttcaagt ctttgtttgt attcttcatg
    15721 cttgctttca tcgataaatt ttaatctctc ttcaagtccc tttttacaaa gttcttcaaa
    15781 aactatgtca tcattatcaa agctaaattc ttttgtttct tcaggcaagg taatattatg
    15841 atctttagca tattctcttg taaatttaaa attcggtgga gtgggattgc caagattaag
    15901 ctctaaatta catttttgcg cgatttcttg tgtattttct atagcttctg gaatatctgc
    15961 aaaaagctca ctcatttgct cagggctttt aacataaaat tcatgcacac tatgacgcat
    16021 tctatcagga tcattaagtt tttttcccat agctatacac ataaaaacct catgggcagc
    16081 cgctctttct ttgaaagtat aatgcgtatc atttgtagca ataattttta tatttaattc
    16141 tttagaaagt ctgataatat catcatctat cattctttga tcgcctatac catgacgcat
    16201 gatttcaaaa taaaaatcat ctttaaaaac ttttttatac catagcgccg cttcttttgc
    16261 tgcttcatag ccttttgcac caaaacgcac atttctttca ctataagtat ttaagtgcca
    16321 atttacttca ccttgcaagc aagcagaaga acaaataaga ccttcgctat gatcttccaa
    16381 aagcttttta ttgatacgcg gataataata caaaccttta atataacttt gagaacttaa
    16441 atacattaaa ttttgatatc cgatctcatt ttttgcatac aaacaaaggt gaaaacgctg
    16501 acgagaactt ttatcatcta attcatcgtg attatgcaaa tacgcttcca taccaatgat
    16561 aggttttaaa ccttgtgctt tcattgtttg ataaaaatca attgccccaa acatatttcc
    16621 atgatctgtc atagccacac ttgtagcacc ctgctctttt aaagtcaaag ctaattcttt
    16681 aagcttattg gctccatcaa gcaaagaata ttctgtatgt aaatgtaagt gtgtaaattg
    16741 actcattttc ttcctttagt tttttaaggc ttattttaaa attataaatt tttctcgctg
    16801 aatttgaaag aaattggtcc taaatttcaa cttaaatttt acaaaaaggc aaaaattcag
    16861 ccaaaataaa ctataataaa atctaagatt ttaatcttaa taaaaagaac ttttcaaagg
    16921 atgaaatgat gaaagtaaaa attgcttatt gcaatctttg aaattatcgc ccacaagctg
    16981 caagggttgc agaagaacta caaagcgatt tcaaagatgt tgaagtagaa tttgaaattg
    17041 gcggcagagg taattttatc gttgaagtag acggaaaagt tatcttctct aaaacacaac
    17101 ttattaattg cgaaagtgaa agatttccat atcaaaatga aattaatcaa ttaataaaaa
    17161 atagagtgta atcaaacact ctatcataac attttctcat attccttacc aatatatatg
    17221 ttttgctcat actcgataat aggacgctta atacaacttg gattttctaa tacaattttt
    17281 tcaagttctt tttcatttaa atttttaact ttttctttgt ttaaaccaag ttttttagaa
    17341 gttaatccag cagtattgat aagttcttca aaagattttt gttttaacca tgtgtataaa
    17401 atatcttgat taatcttttt aatatccata aaatcaaaca caatgccttt ttgtgttaaa
    17461 gcatccatag ctttttttac agaattgcaa tttttaatac cataaagttt cattttctag
    17521 ccttttttac caaatctgcg attaaaaaag caagttctaa tgcttgatcc gcattaagtc
    17581 ttggatcgca ttgagtctca taacgatctt ccaagctttg agcagtaaca ttgcttgcac
    17641 cacctgtgca ttctgttaca tctttcccag tcatttcaag atgcacccca cctggataaa
    17701 ctccttcgct tattgcaatc tcaaaaaaag atctcacttc ttgcatgatt ttatcaaact
    17761 cacgtgtttt aaaattacct gcttttactg tatttccatg cataggatct atgctatata
    17821 ctaaatttaa accttcactt ttaagtttag agaaaatttt tggcaaatta ttgataattt
    17881 tatctgcacc catgcggata ataatattta atcttccttc ttcattattt ggatttaaaa
    17941 catttgctaa agctatgata tcatcagcac ttgcactagg tcctatttta acccctaaag
    18001 gattttttac tcctcttaaa aaatgtacat gagcttcatc aagtgccctt gttctttcac
    18061 ctatccaaag catgtgagct gaacaatcgt aaatttctcc acttaaacta tccactctag
    18121 ttaaagcttc ttcataaggc aaaagtaaag cttcatgtga agtataaaca ctaacttctc
    18181 ttaggcttgg agtattactt gtattaatcc cacaagcttc cataaaagct aaagcttgtg
    18241 aaattttttc actgatatca gtatattgct tatggagttc actctttttt aaaaaaccca
    18301 aattccaacg atgtacttca tgcaaatctg ctaaaccacc cttagcaaat ccacgtaaca
    18361 aatttagcgt tgttgcactt tgataataag cttcaagcat tctatgtgga tcaggaatgc
    18421 gtgcttgttc gctaaattca aaaccattaa taatatcacc acgataacta ggaagactta
    18481 taccatttaa ctcttcaaaa tcactacttc ttggcttagc aaactgccct gcaatacgac
    18541 caatttttac aacaggacat ccaccggcaa atgtaagcac tatagccatt tgaagtaaaa
    18601 ttttaaacat atcacggata tttacagcgc caaaattttc aaagctttca gcacaatctc
    18661 caccttgaag taaaaaagct tcttttttgc aaactcttgc taaagacttt tgaagatttc
    18721 tcacttctcc agcaaaaacc aaaggaggaa gcttctcaag tcttgctaaa actctattca
    18781 tttcctcttg atctggatag ataggttgct gttttatagg atagtttttc caagaattct
    18841 tagtccacat ggttttttct ttcgttttat ttatcagctt cctctataag ttgaataacc
    18901 aaaaggagaa agggttattg gaacatgata atgtttttga tctttagaaa gctcaaaact
    18961 tacctctaca aaaggataaa aagtatttat tttgtgtgat gtgtaatagt cttttgtgaa
    19021 aaatttaagc ttataaattc caaaagccct attttcagct ttttcatatg gtaataaatc
    19081 tcctattcta ccattttctt cggtaaattc ttcacttact tttttccact gttgatttgc
    19141 ttccaactta taaagctcaa cttttacttt aggagcaggt tgtccagaag taatatccaa
    19201 gacatgagta cttaattgat attcagtagc actcaaaaac attggcacgc ttgctagtat
    19261 taataaagtt tttttaatag aaaacatttt ctctccttgt ataatattta caaggaatat
    19321 tataca
//
LOCUS       DAPWGO010000026        19134 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.027, whole genome shotgun sequence.
ACCESSION   DAPWGO010000026 DAPWGO010000000
VERSION     DAPWGO010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19134)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19134)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19134
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.027"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            15..440
                     /gene="exbB"
                     /locus_tag="RJ336_000806"
     CDS             15..440
                     /gene="exbB"
                     /locus_tag="RJ336_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDZ5213264.1"
                     /translation="MEFLKDYIDLIIFLILGIMAFIAFWCVVERMLFFRKINFKNYEN
                     QEQFDDAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSL
                     ALKATALGLLVAIPALMAYNALLRKVSLLSNAYKANKNA"
     gene            433..822
                     /gene="exbD"
                     /locus_tag="RJ336_000807"
     CDS             433..822
                     /gene="exbD"
                     /locus_tag="RJ336_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDZ5213265.1"
                     /translation="MLKLPKNEGLNIVPFIDIMLVLLAIVLSISTFIAHGKIQISLPS
                     SENATNISNNEKKLLITIDEKNTFYLNDKLADLNEVQNAIFSLDKKTIVELKSDKNAK
                     FESFVKIIDFLKAKEHENFQILTEKNK"
     gene            819..1502
                     /locus_tag="RJ336_000808"
     CDS             819..1502
                     /locus_tag="RJ336_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDZ5213266.1"
                     /translation="MKTLFLNHKYQASYITFIVFIPLLFVIFHSNDFFKMEIKNEDSF
                     SLAIKQFTQTNPTNETKPTESIIEPIKPKPQPKVIKKTPEKIQKKIKKTPPHPIPNKT
                     PIAPTQEVKTFTKTTDTNVKPKITQLTQGKDNHPVLKEIQKAIQQAQFYPRQAKKMRM
                     QGTVKVEFLWKKNKTLADLKIIESSGYDLLDKSALESIRKASLNFPQYNGDLRITLPI
                     IYDFKTLRG"
     gene            complement(1515..2384)
                     /locus_tag="RJ336_000809"
     CDS             complement(1515..2384)
                     /locus_tag="RJ336_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213267.1"
                     /translation="MKIDTSASLTHSLTNNVDKKELSVLKKEDQDKIPVQDLSSLNSD
                     GVKIVFENKQGELIALNLSDENYSSLQKNFGSYTNYVARNDGSIRLNGEANQFVSNWF
                     ESVKDNFGSLNSNLNNKQQSVKLNFNTSTLQQSMQNLGFKTSDEKISDDANIEEKLNF
                     FIDKDVNKDGKVDDSDVKEPSMREILSDIKEASGGGANAMKTIDPQKINKKDDKENNI
                     KEKEDEDLLQKAQEKGLSALSADEQAKLEASNPEEFEKLKQKSLQELSQNLSKDFQNK
                     IENQEAQIVDKRV"
     gene            complement(2388..2549)
                     /locus_tag="RJ336_000810"
     CDS             complement(2388..2549)
                     /locus_tag="RJ336_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213268.1"
                     /translation="MLKIILVLSILSSFAFANSCANYEQELKKCNSLKNSHERKMCRL
                     GLFAKCKKG"
     gene            2644..3627
                     /locus_tag="RJ336_000811"
     CDS             2644..3627
                     /locus_tag="RJ336_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MnmA/TRMU family protein"
                     /protein_id="HDZ5213269.1"
                     /translation="MKALALFSGGLDSMLAMKLITAQGIEVKALNINIGFGSTSDKSE
                     IMKKRAAMIGADFEMIDVRNSYLQEVLFNPQYGYGKHFNPCIDCHAFMFKTALAMLKE
                     ENASFIITGEVLGQRPMSQRSDAMAKVKKLALDEEDLILRPMCAKNLPLTKPEREGWV
                     DREKLEGISGRSRKRQLELAAKFGLEDFESPGGGCLLTLDNFAKKIRDFIEFDKDMQV
                     NDAQLLKYGRHLRLPNGAKMIIGRNELENTLLKGLKTPKYEVIELGDLIGAYSLVDEK
                     ISEKDLELALKIALTYTKHEAGKSYELKFKNQAYTSIAFENKADINQFFIS"
     gene            complement(3713..4801)
                     /gene="aroC"
                     /locus_tag="RJ336_000812"
     CDS             complement(3713..4801)
                     /gene="aroC"
                     /locus_tag="RJ336_000812"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDZ5213270.1"
                     /translation="MNTFGTRLKFTSFGESHGVAVGCIIDGIPAGVKFDEEFLQNELD
                     KRKGGSKFATPRKESDKAQVLSGVFEGYTTGHPIAIVVFNENAHSKDYDNLKDLFRPA
                     HADFTYFYKYGIRDHRGGGRSSARESVARVAGGAVAAMLLREFGICVQSGVFGVGTFV
                     SNLKEKEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLIGL
                     GEVLYDKLDSKLAHALMGINAVKAVEIGEGINASKMRGSCNNDALKDGKFLSNHSGGI
                     LGGISNGENLILKTYFKPTPSIFSKQESIDKFGNNLEFELKGRHDPCVGVRGSVVASA
                     MVRLVLADCLLLNASANLNNLKNAYGLK"
     gene            complement(4801..5475)
                     /locus_tag="RJ336_000813"
     CDS             complement(4801..5475)
                     /locus_tag="RJ336_000813"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDZ5213271.1"
                     /translation="MKNIEKLEQSLTYEFKDKNLLIHALTHKSFKKSYNNERLEFLGD
                     AVLDLVVGEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAEENN
                     GGKEKPSILSDALEAIIGAIHLEAGFEFAKTIALRLIEKNFPQIDAKILIKDYKTKLQ
                     EITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKELARAIAGSKKEAQQMAAKIAL
                     EKLGAL"
     gene            complement(5462..5902)
                     /gene="rnhA"
                     /locus_tag="RJ336_000814"
     CDS             complement(5462..5902)
                     /gene="rnhA"
                     /locus_tag="RJ336_000814"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDZ5213272.1"
                     /translation="MKHIEIYTDGSCLNNPGFGGWAYILRYKEYQKEGFGAEANTTNN
                     RMELMAIIESLKALKEPCEISLFTDSNLMVQSINEWLEGWIKKDFKGKKNIDLWKEYI
                     KVAKSHKIKAFWVKAHNGHLENERCDTLAREAALKIARENDEKH"
     gene            complement(5889..6875)
                     /locus_tag="RJ336_000815"
     CDS             complement(5889..6875)
                     /locus_tag="RJ336_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213273.1"
                     /translation="MDFFFVEYRDPLVGLIILTILVFVVAVANYIWKIFANKDEEQKL
                     EKFIKKFEMDNAHKELLRNSSLSFGNLSFLAEIFTKSGEFEKATQIYLIALEKCKDKQ
                     EREFIFLSLAKVYFKAGFLERAKEVLLQALKLRPRNIQALKLLKIVYLKLRSYKENLE
                     LLECLFELNEDVQKEHDFIKALELCTFNITDEEKKKKLLEFKIEDNPMLGRLVFEKYH
                     MFLGQNFFDICDLLYRENEAFNLENQDFLEFFYALGKISKHDDTHQFVFKNSNFKMLK
                     ILKDNSFNAGLEFSYRCSECKNVMPLFFYHCPVCYEFNTCKIIYEVKNNETH"
     gene            6945..8762
                     /locus_tag="RJ336_000816"
     CDS             6945..8762
                     /locus_tag="RJ336_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDZ5213274.1"
                     /translation="MITKESIENLSQRLNIVDIIENYIEVKKQGSSFVCICPFHADKN
                     PSMHINPTKGFYHCFACKAGGDAFKFVMDYEKLSFADAVEKVASLSNFTLSYTKEKQE
                     NKKELKSILPSLNAYFKDNLKHHKEVLTYLYQRALNDKDIAKFELGFAGASEDSIRLL
                     QNQKIPLEDAMSVGALKKDENNEFYASFIWRITFPIYDHKDLLVGFGGRTLNPNVPAK
                     YVNSPQNILFDKSRIFYAFNIAKENIAQKKEIIVCEGYMDAIAFHKAGFNNAVAVLGT
                     ALTEHHLPLIRRYDAKVILCFDNDEAGLKAATRSAFLLSTNKIDGKVAILQGGKDPAE
                     LVAKNESTKLHDILDEGIELGEFYIRRLISTHSIISALDKQKALETIQKFTFNLEPLV
                     ANSYTSLVSNLLKVDEKFIVLSQNSKKTIQTPLISQNKYNFPKEKIHIAELELIAFLK
                     QHPDICNDFKQISDSVCFKHKILLDKILEKKGYEDSDIREFESKNIRKNLNYSEFLLG
                     ICKVNLAFLNNVKIKNSTLALKKQLFTLIDKNLNLLIKNLNTEELNNFLKEYLSFLKY
                     EKNEEILQQSFRNLNGIFSNKNFTAYDLGFSAQDNDEPF"
     gene            8844..9116
                     /locus_tag="RJ336_000817"
     CDS             8844..9116
                     /locus_tag="RJ336_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HDZ5213275.1"
                     /translation="MMPFSDEELINPVKASLEKSLPILERDGGGLEFLGIKNGVVYVH
                     LIGACKGCASSGTTLKYGLERQLKIDIHPEITIINLNGGADEFAKL"
     gene            9103..9654
                     /locus_tag="RJ336_000818"
     CDS             9103..9654
                     /locus_tag="RJ336_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDZ5213276.1"
                     /translation="MQNYKKLGIEHFYKKDFKTAKMYFSMAYEKRKNKRLLNFICLCD
                     LALKSPKEASLLFDFYIEHYKISSIDKDLEEILSTIEFKKQENKQENEFEDGHALNYQ
                     DFLKSEEELGFQKSFENIINSTKLVIDNRDDFLDFLEKLLDNGYKDMTLNYIENVMPH
                     FWANDRFIKLQEKLIGFKSEIKT"
     gene            9638..10921
                     /locus_tag="RJ336_000819"
     CDS             9638..10921
                     /locus_tag="RJ336_000819"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDZ5213277.1"
                     /translation="MKLKLENSFITDNTLECEKECFFLQTTQNAKFHAQALEKGAKII
                     DVNECKKLLKIDEKIQIIGITGTNGKTTTAAAIYSILLDLGYKCGLCGTRGAFINDEQ
                     IDEKSLTTSPILKTLEYLQIATQKKCDFFIMEVSSHALVQNRIEGLKFVAKIFTNITQ
                     DHLDFHGTFENYKEAKELFFTDESLKFINKDALAIKFNVRNAFTYGIENPALYQIKAY
                     SLEEGISAIATNKNQTFHIDSPLLGLFNLYNLLVASACVNELVKPDLKDLEKAISGFG
                     GVCGRVEQVAKGVIVDFAHTPDGIEKVLDTLKNKKLIVVFGAGGDRDKTKRPLMGTIV
                     EHFAKIAIITSDNPRSEEPKTIMEEILSGFAKKEKVLMIEDRKEAIKKALELKENDDL
                     VVILGKGDETTQEIKGIKYPFSDKVVVNEILKNQG"
     gene            10925..11236
                     /locus_tag="RJ336_000820"
     CDS             10925..11236
                     /locus_tag="RJ336_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDZ5213278.1"
                     /translation="MFENMDFSKMGELLNQVQEKAKNIELELANREFSAKSGAGLVKV
                     SANGKGEIIDVSIDDSLLEDKESLQILLISAINDVLAMVAQNRSSMANDVLGGFGGMK
                     L"
     gene            11233..12327
                     /locus_tag="RJ336_000821"
     CDS             11233..12327
                     /locus_tag="RJ336_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HDZ5213279.1"
                     /translation="MKKILIICMLFTLSFGIERPKFEDFLAGYERNKASMLNYEGMPA
                     FALSENLLAVLKQPNTKLNKYVKYDPFLNLYLVRTDFSLIPTPMGDEEKLTRNDWVGI
                     WDPNKPYIGHIKYLAQNIDEKDQLDFNSKIGLLGTPCCEMMGIALNNSSFIGNRYLKH
                     FMKYNDAYWGDIGVDFVVRENKIYVNNVRKNPQFLINDQVISVDGLPANDLRKLNEKI
                     LFADRGSTLYFQVLRDNMDLNISTEVFAKDLSKFNLPDSKPKPKITNFTSNLGLTVNT
                     SLVVTKIDPKSKASNAGFMVGDKILRVNNIILNNFKELQNILSAGNDFSILIERKSTK
                     LPLSNFNNELGGNANSGGDGKFQFFIRLTK"
     gene            12324..13169
                     /locus_tag="RJ336_000822"
     CDS             12324..13169
                     /locus_tag="RJ336_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDZ5213280.1"
                     /translation="MNLKELFIHHLEKNLPKVESFHPFFNEALALMLKAGGKHFRAQL
                     LLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDET
                     TAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRL
                     SLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDV
                     TTSQEQSGKPTNNDTHKNSFVNLLGLEQAIKTKENLLSECEQDLEKLNEKLAQMIQNL
                     IIQYL"
     gene            13179..15077
                     /gene="tkt"
                     /locus_tag="RJ336_000823"
     CDS             13179..15077
                     /gene="tkt"
                     /locus_tag="RJ336_000823"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDZ5213281.1"
                     /translation="MDIQILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVLSY
                     HLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQLHSKTPGHP
                     EISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGIS
                     YEACSLAGLHKLDNFILIYDSNNISIEGDVGLAFNENVKMRFEAQGFEVLSINGHDYE
                     EINKALEQAKKSTKPCLIIAKTTIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAGFDP
                     NISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSGKKELLERLLNPDFSKIAYPDFK
                     GKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTELHGMGDFIEGKNIHFGIREH
                     AMAAINNAFARYGIFLPFSATFFIFSEYLKPAARIAALMKIKHFFIFTHDSIGVGEDG
                     PTHQPIEQLSTFRAMPNFLTFRPADGVENVKAWQIALNADIPSAFVLSRQKLKALNEP
                     IFGDVKNGAYLLKESKDAKFTLLASGSEVWLCLESANELEKQGFACNVVSMPCFELFE
                     KQDKTYQERLLKGEVIGVEAAHSNELYKFCHKVYGIESFGESGKDKDVFEHFGFSVSK
                     LINFILSK"
     gene            15079..16188
                     /locus_tag="RJ336_000824"
     CDS             15079..16188
                     /locus_tag="RJ336_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaE family lipid ABC transporter permease
                     subunit"
                     /protein_id="HDZ5213282.1"
                     /translation="MNANFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDF
                     KDLKAIDTAGVRFFLALENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSH
                     KNFSEYFIDLGKLSLELLKILIKFTNFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSA
                     FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAG
                     RSASSYTAQIGVMKITDEIAAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISII
                     GGMMVAKLNLDISFAEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNT
                     TQSIGIYTTKSVVNAIFWVIAFDALFSVVLTSAGI"
     gene            16189..16911
                     /locus_tag="RJ336_000825"
     CDS             16189..16911
                     /locus_tag="RJ336_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDZ5213283.1"
                     /translation="MVIKAQNIITKFGEKIVHDGVSFEIKKNEIFGILGSSGSGKSVL
                     LKQMLMLEHFDGGEYEILGYKLKNIDEEDALALRKKWGVVFQFAALFSFFNVYENIAI
                     PLKEYTHLDENSIQELVLMKLKMVGLNESVLKQFPSELSGGMQKRVAIARALALDSKL
                     LFLDEPTSGLDPHSSREFDDLVLELKKSFDLNIILVTHDKESMKNLLDRFIILENKKV
                     GFCGTYEELRLQNERLFKKFME"
     gene            16914..17804
                     /locus_tag="RJ336_000826"
     CDS             16914..17804
                     /locus_tag="RJ336_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HDZ5213284.1"
                     /translation="MENRANYFFVGLFVFGVFFASLGFILWLGGYSKEESFKYYEIHT
                     QESVAGLGIKAPVRLLGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQL
                     QGITGLKFIQLQGGSKNSKDLVSIHGKLPVIPFKESFLATIDRQSEHIFSLVKTADDK
                     SKELLSEKNLKNLEILLQNLAELSANLNANSKNLSLNLSNASLKIGKMADNISLSAQN
                     FNSSLKNIKESTMILKNFIKKADEKLNTYDDIKASLMQNLELFKRVLIESNILIENLQ
                     NSPADLIFKETKPKLGPGEK"
     gene            17804..18403
                     /locus_tag="RJ336_000827"
     CDS             17804..18403
                     /locus_tag="RJ336_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HDZ5213285.1"
                     /translation="MLKQIFYIFTFIFILCGCSLKHETINKNENIILKDEGIDSNIFF
                     KKTGKILKIRNANTPLYLNSRAIVYIDNGFSNKYAHYFWGDLPSNLYSFLILSKFEQS
                     NIFTTLLSSTSSLNADYALESRINSFEQILSNNENYAQISISVNFINLENNQIIAHKI
                     FNTKEKIEKKDIRSTYNAFQKALNKIGNEIIFWVNSNLS"
     gene            18459..18959
                     /locus_tag="RJ336_000828"
     CDS             18459..18959
                     /locus_tag="RJ336_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213286.1"
                     /translation="MKSDLEIFKKHLGEIQGVNEFKANQICSQINDANDFIGALQVLD
                     MSLKKIEKSILERIDENSDDMQKRTLDATASQLIQNCSFMGTALFGNIFNVYVGKKLF
                     EFEIANPLLILQTSNYEGVLAYIQDKRDEIKIILSELATTITMGETMDNTGIYNSTMD
                     FKNLFK"
BASE COUNT         7005 a         2965 c         2884 g         6280 t
ORIGIN      
        1 ttttggagaa aaatgtggaa tttctaaaag attacatcga tttaattatc tttttaattc
       61 taggaattat ggcatttata gctttttggt gtgtcgtaga aagaatgcta ttttttagaa
      121 aaattaactt taaaaattat gagaatcaag agcaatttga tgatgcgatt agtgaaaatt
      181 taaccactat atatatcatc tattccaatg ctccttatat aggactttta ggcactgtaa
      241 taggcatcat ggttacattt tacgaaatgg gcttggcggg taatatagat gtcaaatcta
      301 tagtcgtggg actttcttta gctcttaaag ctacagcctt aggacttttg gttgctattc
      361 ctgctttaat ggcttataat gccttactta gaaaagtttc cctcttaagc aatgcttata
      421 aggcaaataa aaatgcttaa actaccaaaa aatgaaggtt taaatatagt tccatttata
      481 gacattatgc ttgttttgct tgctatagtg cttagtattt caacctttat tgcgcatgga
      541 aaaattcaaa tctcacttcc ttcaagtgaa aatgctacca atataagcaa taatgaaaaa
      601 aaacttctta taaccataga cgaaaaaaat actttttatt taaatgataa attagctgat
      661 ttaaatgaag ttcaaaatgc tattttttca cttgataaaa aaaccatagt agaactaaaa
      721 agcgataaaa atgctaaatt tgaaagcttt gtaaaaatta tagatttttt aaaagccaaa
      781 gaacatgaaa attttcagat tcttactgag aaaaacaaat gaaaacttta tttttaaatc
      841 ataaatacca agcttcttat ataactttta tagtctttat acctttactt tttgtcattt
      901 ttcactcaaa tgactttttt aaaatggaaa ttaaaaatga agattctttt tctttagcaa
      961 taaaacaatt tacccaaact aatccaacaa atgagactaa accaacagaa tccattatag
     1021 aacccatcaa accaaaacct cagccaaaag ttattaaaaa aactcctgaa aaaattcaaa
     1081 aaaagataaa aaaaacacct ccacacccaa taccaaataa aaccccaata gcaccaactc
     1141 aagaagttaa aacttttaca aaaacaactg atacaaatgt caaacctaaa atcacccaat
     1201 taacacaagg aaaagataat caccctgtat taaaagaaat tcaaaaagct atacaacaag
     1261 cacaatttta tccaaggcaa gcaaaaaaaa tgcgtatgca aggaactgta aaagtagaat
     1321 ttttatggaa aaaaaacaaa actttagcag atttaaaaat catcgaaagc tcaggatatg
     1381 atttgttaga taaaagtgct ttagaaagca taagaaaagc ttctttaaat tttccacagt
     1441 ataacggaga tttaagaatt acactaccta ttatatatga ttttaaaacc ctaagagggt
     1501 aaaattataa tttgctacac tctcttatct acaatttgcg cttcttgatt ttcaatttta
     1561 ttttgaaaat ctttacttaa attctgactt aattcttgca aagatttttg cttcagtttt
     1621 tcaaattctt caggattgct agcctcaagc tttgcctgct catcagcact taaagcactt
     1681 aaaccttttt cttgagcttt ttgaagcaaa tcttcgtctt ctttttcttt gatattattt
     1741 tccttatcat cttttttatt gattttttgc ggatctatag ttttcatagc attagctcca
     1801 ccacctgatg cttctttaat gtcgcttaaa atttctctca tgctaggttc tttaacatca
     1861 ctatcatcaa ctttaccatc tttatttaca tctttatcaa taaaaaaatt taatttttct
     1921 tctatatttg catcatcaga tattttttca tcgcttgttt taaagcctaa attttgcata
     1981 ctttgctgaa gagtacttgt attaaaattt aattttacac tttgttgttt attatttaaa
     2041 tttgaattta aagaaccaaa attatctttt acactttcaa accaatttga aacaaattgg
     2101 tttgcttcgc cattaagcct tatactacca tcatttctag caacataatt cgtataagaa
     2161 ccgaaatttt tttgtaaact actataattt tcatcgctta aatttaaagc tataagttca
     2221 ccttgcttat tttcaaaaac aatcttaaca ccatcgctat ttaaactcga aagatcttgc
     2281 acgggaattt tatcttgatc ttcttttttt aatacgctaa gctctttttt atcaacatta
     2341 ttagttaaag aatgagttaa actagcagaa gtatcgattt tcattattta tcctttttta
     2401 cattttgcaa ataaacctaa acgacacatt tttctctcat gtgaattttt taaagaatta
     2461 cactttttaa gttcttgctc gtagttagca caagaatttg caaaagcaaa agaactcaaa
     2521 atgcttaaaa ccaaaattat ttttaacact ttccaatcct tattttaaag attttttagt
     2581 taaaattata ccttttataa tcgacaaaat cttaaaaaac tttataatct cagaaaggaa
     2641 tcaatgaaag cattagctct ttttagcggt gggcttgata gtatgcttgc aatgaaactc
     2701 atcactgcac aaggcataga agttaaagct ctaaatatca acataggttt tggaagcaca
     2761 agtgataaaa gcgaaatcat gaaaaagcgt gcggcaatga taggtgcaga ttttgaaatg
     2821 atagatgtaa gaaattccta tcttcaagaa gtgcttttta atccacaata tggctatggc
     2881 aaacatttta atccttgtat agattgtcat gcttttatgt ttaaaactgc tttggctatg
     2941 ttaaaagaag aaaacgcaag ttttatcatc acaggagaag ttttaggaca acgccctatg
     3001 agtcaaagaa gtgatgcgat ggcaaaggtt aaaaaacttg ctcttgatga agaagattta
     3061 atcttgcgtc ctatgtgtgc aaaaaaccta cctctaacca aacctgaaag agaaggttgg
     3121 gtagatagag aaaaactcga aggtattagt ggaagaagtc gtaaaagaca acttgaactt
     3181 gcagctaaat ttggcttaga agactttgaa agcccaggtg gaggttgttt gctaactctt
     3241 gataattttg ctaaaaaaat tcgagatttc atagaatttg acaaagatat gcaggttaat
     3301 gacgcacaac ttttaaaata tggtcgtcat ttaagattac ctaatggagc taaaatgatc
     3361 ataggtagaa atgaacttga aaatactctt ttaaaaggtt taaaaactcc taaatatgaa
     3421 gtcatagaac ttggggattt aatcggagct tactctttgg tagatgaaaa aatttcagaa
     3481 aaagacttag aacttgcctt aaaaatagcc cttacctata ctaaacacga agcaggaaaa
     3541 agctatgaac ttaaatttaa aaatcaagct tatacaagca tagcttttga aaataaggct
     3601 gatattaatc aattttttat tagttaaagt ataaagtatt tagcaaaaca agcgatatag
     3661 tatttgaatc ttttcaaaat attgcaatca agcccatgaa aatgggcttt ttttatttta
     3721 atccataagc attttttaaa ttgtttaaat tcgcactcgc attcaaaagc aaacaatcag
     3781 ccaaaactaa acgcaccata gcactagcta caacacttcc tctaacacct acacaaggat
     3841 catgcctacc tttgagttca aattccaaat tattgccaaa tttatctata ctttcttgct
     3901 tggaaaaaat agaaggagta ggtttaaaat aagtttttaa aataagattt tctccatttg
     3961 aaattcctcc taaaattcct ccgctatgat tgcttaaaaa cttgccatct tttaaagcat
     4021 cattattaca cgatccgcgc attttgcttg cattaatacc ttcgcctatt tcaactgctt
     4081 taacagcatt aattcccatt aaagcatgag ctaatttaga gtctaactta tcataaagaa
     4141 cttctccaag tcctataagc ataccactaa cttttgtaaa aacagcagcg cctacgctat
     4201 cttttgagtt tctagcattt aaaatttcat ttttaaagtc actttctagt tttggatcaa
     4261 ggcaaaaaat ttcacttttc ttagcaaatt caaaatcaaa ttctttttct ttcaaatttg
     4321 atacaaaagt tcctacccca aaaacaccac tttgaacaca aatgccaaat tcacgcaaaa
     4381 gcatcgctgc aactgcacca ccagccactc tagcaacact ttccctagca cttgatctac
     4441 ccccacccct atgatctctt atgccatatt tataaaaata agtaaaatcc gcatgagcag
     4501 gacgaaatag atcttttaaa ttatcataat ccttagaatg ggcattttca ttaaaaacca
     4561 ctatagctat gggatgaccc gttgtatatc cttcaaaaac cccgcttaaa acctgagctt
     4621 tatcgctttc ttttcttggt gttgcaaatt tacttccgcc tttgcgttta tcaagctcat
     4681 tttgcaaaaa ttcttcatca aatttaaccc cagcaggtat tccatcaata atacatccaa
     4741 cagccacacc atgagactca ccaaaacttg taaatttcaa tctcgtacca aaggtattca
     4801 ctataaagct cctaatttct caagtgcaat ttttgctgcc atttgctgtg cttctttttt
     4861 gcttcctgca atagctcttg caagttcttt accatcaagc attaaagcaa tttcaaattg
     4921 ctttaaatga tcagggccaa aagcacgcac tgtttcatac tgcggagttt gtccgatttt
     4981 tccctgtgta atctcttgta attttgtttt ataatctttt ataagaattt ttgcatcaat
     5041 ttgagggaaa tttttttcta taagccttaa agcaatagtt tttgcaaact cgaacccagc
     5101 ttctaaatgt atagcaccta taatggcttc taacgcatct gaaagtatag aaggcttttc
     5161 ttttcctcca ttgttttcct cagcaacact cataagaata aaatcgccca aatttaaact
     5221 atttgcaatt tttgcaaaag acttttcatt cactaaagct gctctaagct tagataaatc
     5281 tccttcggca tctttggcga atttatgaaa aaggtattca cctacaacta aatcaagcac
     5341 ggcatcacct aaaaattcca agcgttcgtt gttgtaagat tttttaaaac ttttatgggt
     5401 taaagcatgt ataagaagat ttttatcttt aaattcataa gttaaactct gctctagctt
     5461 ttcaatgttt ttcatcattt tcccttgcaa ttttcaaagc agcttcacgc gccaatgtat
     5521 cacacctttc attttccaaa tgtccattat gtgcttttac ccaaaaagcc ttaatcttat
     5581 gagattttgc cactttaata tattccttcc ataaatctat atttttttta cctttaaaat
     5641 ccttttttat ccatccttct agccattcat taatactttg aaccattagg ttagaatctg
     5701 taaaaagcga aatttcacaa ggctctttta aagccttcaa agattcaata attgccatta
     5761 gctccattct attgttagtg gtattagcct cagctccaaa accttccttt tgatactcct
     5821 tataacgcaa aatataagcc catccgccaa aacctggatt gttaagacat gagccatctg
     5881 tataaatttc aatgtgtttc attgtttttc acttcataaa taattttaca agtattaaac
     5941 tcataacaaa caggacagtg ataaaaaaac aaaggcatta catttttaca ctcagaacaa
     6001 cggtatgaaa attctaaccc cgcattaaaa gaattatctt ttaaaatttt taacatttta
     6061 aaattagaat ttttaaaaac aaactgatgc gtatcatcat gctttgaaat tttacccaaa
     6121 gcataaaaga attctaaaaa atcttgattt tctaaattaa acgcttcatt ttccctataa
     6181 agcaaatcac aaatatcaaa aaaattttgc cctaaaaaca tatgatattt ttcaaaaact
     6241 aaacgcccca acataggatt atcttctatt ttaaattcta aaagtttttt ctttttttct
     6301 tcatcagtga tattaaaagt acaaagttct aaagctttga taaaatcatg ctctttttgc
     6361 acatcttcat taagctcaaa aagacattct aaaagttcta aattttcttt ataagaacga
     6421 agttttaaat aaacaatttt taaaagtttt aaagcttgta tatttcttgg acgcagtttt
     6481 aaagcttgta ataaaacttc ttttgcacgc tctaaaaatc ctgctttaaa ataaactttt
     6541 gccaaagaaa ggaaaataaa ttctctttct tgtttatctt tacatttttc aagagcaatt
     6601 aaataaattt gagttgcttt ttcaaattcc ccacttttag taaaaatttc ggccaaaaaa
     6661 cttaaatttc caaaactcaa gctactattt cttaacaact ctttatgagc gttatccatt
     6721 tcaaattttt ttataaattt ttcaagcttt tgttcttcat ctttgttagc aaatattttc
     6781 caaatataat ttgcaacagc tacaacaaat actaaaattg ttaaaattat aagccctact
     6841 aaagggtctc tgtattctac aaagaaaaaa tccatagtct cgctctaaaa attttatgcc
     6901 aaattatagc caaatctttg tataatttta acaaggtttg taaaatgata actaaagaaa
     6961 gtatagaaaa tttatcccaa agacttaata ttgttgatat tatagaaaat tatattgaag
     7021 taaaaaaaca aggctctagt tttgtgtgta tctgtccttt tcatgcagat aaaaacccgt
     7081 ctatgcatat caatcctacc aaaggttttt atcattgttt tgcctgcaag gctggtggag
     7141 atgcttttaa atttgtaatg gattatgaaa aattaagttt tgccgatgca gttgaaaaag
     7201 ttgcaagcct tagtaatttt actttgagtt atacaaaaga aaaacaagaa aataaaaaag
     7261 agctaaagtc tatactacca agcttaaatg cgtattttaa agataatctc aaacaccaca
     7321 aagaagtctt aacctatctt taccaaagag ctttaaatga caaagatata gccaaattcg
     7381 aattaggttt tgcgggagca agtgaagata gtataagatt attgcaaaat caaaaaattc
     7441 ctttagaaga tgctatgagt gttggagctt taaaaaaaga tgaaaataat gaattttacg
     7501 caagttttat atggcgtatc acctttccaa tctacgatca taaagactta ttagtagggt
     7561 ttggagggcg tactttaaat cccaatgtac cggcaaagta tgtaaattca ccccaaaata
     7621 tactttttga taaaagtaga attttttatg cttttaacat cgctaaagaa aatatagccc
     7681 aaaaaaaaga aataatagta tgtgaaggct acatggatgc aatagctttt cacaaagcag
     7741 ggtttaataa tgctgtagca gttcttggaa cagcattaac cgaacatcat ctacccttaa
     7801 tccgccgtta tgatgcaaaa gtgattttat gttttgacaa tgatgaagca ggattaaaag
     7861 ctgcgacacg atctgcattt ttattaagca caaacaaaat agacggtaaa gtggcaattt
     7921 tgcaaggtgg aaaagatcct gctgagctcg tagcaaaaaa tgaaagcaca aaacttcatg
     7981 atatactcga tgaaggaata gagcttggtg aattttatat cagacgctta atatccactc
     8041 attccataat ttctgctctt gataaacaaa aagctttaga aactatacaa aaattcacct
     8101 ttaatcttga acctttagtg gcaaattctt acactagtct agtttcaaat ttattaaaag
     8161 tagatgaaaa atttattgtc ttatcacaaa attcaaaaaa aaccatacaa acccctttaa
     8221 tttctcaaaa taaatacaat tttcctaaag aaaaaattca cattgcagaa ttagaactta
     8281 tagctttttt aaaacagcat ccagatatat gtaacgattt taagcaaatt agtgatagtg
     8341 tttgttttaa gcataaaatt ttattggata aaattttaga aaaaaaaggt tatgaagata
     8401 gtgatattag agaatttgaa agtaaaaata ttcgaaaaaa tttaaactat agcgaattct
     8461 tgttaggtat ttgcaaggtt aatttagctt ttttaaacaa tgtaaaaatt aaaaattcta
     8521 cactcgcatt aaaaaaacaa ctttttacgc ttattgataa aaatttaaat cttctaatta
     8581 aaaatttaaa taccgaagaa ttaaataatt ttttaaaaga atatttaagc ttcttaaaat
     8641 atgaaaaaaa cgaagaaatt ctgcaacaat catttagaaa cttaaatgga atttttagca
     8701 acaaaaactt tacagcttat gatttaggat ttagcgcaca agataatgac gaaccttttt
     8761 aatttattta aatttcaagc cttaatttac ctttttttaa acacaatcac gctaaagtat
     8821 ataaaaattt ttaaggataa attatgatgc cttttagcga tgaagagctt ataaatcctg
     8881 ttaaagcaag tttagaaaag agcttgccta tacttgaacg tgatggcgga gggcttgaat
     8941 ttttaggaat taaaaatggg gttgtttatg tccatttaat aggagcttgt aaaggctgtg
     9001 catcgagtgg aacaacgcta aaatatggcc ttgaaaggca acttaagatc gatattcatc
     9061 cagaaatcac tataatcaat ttaaacggcg gagcagacga atttgcaaaa ttataaaaaa
     9121 cttggaattg aacattttta caagaaagat tttaaaactg caaaaatgta tttttctatg
     9181 gcttatgaaa aacgcaaaaa taaacgcttg ctaaatttta tctgcctttg tgatcttgct
     9241 ttaaaatctc ctaaagaagc ttctttactt tttgattttt atatagaaca ttacaaaatc
     9301 tctagcattg ataaagactt agaagaaatt ttaagtacaa ttgaatttaa aaaacaagaa
     9361 aacaaacagg aaaatgaatt tgaagatggg catgcgttaa attatcaaga ttttttaaaa
     9421 agcgaagaag aacttggctt tcaaaaaagt tttgaaaata tcattaatag cactaaatta
     9481 gttattgata atcgtgatga ttttttagat tttttggaaa aattacttga taatggctat
     9541 aaagatatga ctttaaatta tatagaaaat gttatgcctc atttttgggc aaatgataga
     9601 tttatcaaac tccaagaaaa actcatagga tttaaaagtg aaattaaaac ttgaaaattc
     9661 attcattaca gataatacct tagagtgtga aaaagaatgc ttttttttac aaaccacaca
     9721 aaatgctaaa tttcacgctc aagccttaga aaaaggtgca aaaatcattg atgtaaatga
     9781 gtgtaaaaaa cttttaaaaa tcgatgaaaa gattcaaatc ataggaatca caggaaccaa
     9841 tggcaaaacc acaaccgcag cagcgattta ttctatctta ttggatttag gttataaatg
     9901 cgggctttgc ggaacaagag gagcttttat caacgatgaa caaattgatg aaaaatcctt
     9961 aaccacctcc cctattctta aaaccttaga gtacctacaa atagccactc aaaaaaaatg
    10021 tgattttttc atcatggaag taagctcaca cgcactcgtt caaaaccgta tcgaaggctt
    10081 aaaatttgtt gctaaaattt ttaccaatat cactcaagat catttagatt ttcacggtac
    10141 ttttgaaaat tacaaagaag caaaagagct tttttttaca gatgagagtt taaaatttat
    10201 caacaaagat gctttggcta ttaaatttaa tgtgcgtaat gcttttactt atggtataga
    10261 aaatcctgct ttatatcaaa tcaaagctta ttctttagaa gaaggcatta gtgctattgc
    10321 aacaaataaa aatcaaactt ttcacataga ctcgcccttg ctaggacttt ttaatcttta
    10381 caatcttcta gttgctagtg cttgtgtgaa tgaactcgta aagcctgatt taaaagattt
    10441 agaaaaagct atcagtggat ttggcggggt ttgtggtaga gtagaacaag tagcaaaagg
    10501 tgtgatcgta gattttgctc atacgcctga tggcattgaa aaagtacttg acactcttaa
    10561 aaataaaaaa ctcatcgttg tttttggagc aggtggagat agagataaaa ccaaacgccc
    10621 tttaatggga acaatcgtcg aacattttgc aaaaattgct atcattacaa gtgataatcc
    10681 acgtagcgaa gaaccaaaaa ccatcatgga agaaatttta tcaggctttg ctaaaaaaga
    10741 aaaagtttta atgatagaag atagaaaaga agctataaaa aaagctttag aactaaaaga
    10801 aaatgacgat ttagtcgtta ttttaggcaa aggtgatgaa actactcaag aaattaaagg
    10861 gataaaatat ccttttagtg ataaagtagt tgttaatgaa attttaaaaa atcaaggata
    10921 atcaatgttt gaaaatatgg atttttctaa aatgggcgaa cttttaaatc aagttcaaga
    10981 aaaagcaaaa aatatagaac tagaacttgc aaatcgtgaa tttagcgcca aaagtggagc
    11041 aggacttgtt aaagtaagtg ctaatggaaa gggtgaaatt atcgatgtta gcattgatga
    11101 ttctttactt gaagataaag agtccttgca aattttactt atttctgcaa ttaatgatgt
    11161 tttggctatg gttgcgcaaa atcgttccag tatggcaaat gatgttttag gtggttttgg
    11221 aggtatgaaa ttatgaaaaa aattttaatt atttgcatgc tttttacttt gtcttttggt
    11281 atagaaagac ctaaatttga agatttttta gcaggttatg aaagaaataa ggcaagcatg
    11341 ctcaactatg aaggaatgcc agcttttgca ctcagtgaaa atttacttgc tgtgttaaaa
    11401 cagcctaata ctaagcttaa caaatatgta aaatatgatc catttttaaa tttatatctt
    11461 gtaagaactg actttagcct aatccctact cctatgggtg atgaagaaaa acttactcgt
    11521 aatgattggg ttggaatttg ggatcctaat aaaccttata tagggcatat taagtattta
    11581 gctcaaaata ttgacgaaaa agatcaactt gattttaatt ctaaaatagg acttttaggg
    11641 actccgtgct gtgaaatgat ggggattgct ttaaataata gctcttttat aggcaatcgc
    11701 tatttaaaac attttatgaa atataacgat gcttattggg gggatattgg cgttgatttt
    11761 gttgttcgag aaaataaaat ttatgttaac aatgtaagaa aaaatccaca atttttaatc
    11821 aacgatcaag ttataagtgt tgatggcttg cccgccaatg atttaagaaa actcaatgaa
    11881 aaaattcttt ttgcagatcg cggaagcact ctttattttc aagtgttgcg tgataatatg
    11941 gatttaaata tttctactga agtttttgca aaagatttga gcaaatttaa tcttcctgat
    12001 tctaaaccaa aaccaaaaat tacaaatttc acaagcaatc ttggtttaac ggttaatact
    12061 agtcttgttg taactaaaat agatccaaaa tcaaaagcat caaatgcagg atttatggta
    12121 ggagataaaa ttttacgcgt taataatatt attttaaata attttaaaga attacaaaat
    12181 attttaagcg ctggtaatga ctttagcatc ttgattgaac gcaaaagtac taaattacct
    12241 ttatcaaatt tcaacaatga actaggcgga aatgccaact caggtggcga cggtaaattt
    12301 caatttttca taaggcttac taagtgaatt taaaagaact ttttatccat cacttagaaa
    12361 aaaatctacc taaagttgaa agttttcatc ctttttttaa tgaagcttta gcccttatgc
    12421 taaaagcagg aggaaagcat tttcgtgcac aattgctttt aagcgtagta caaagcaata
    12481 aacctgaact tttaaatcaa gctttagatg tggctttagc tttggaattt atccatactt
    12541 attcactcat acatgatgat ttacccgcta tggataatgc ggattttaga cgaggaattc
    12601 caaccttaca caaaagctac gatgaaacta cagccatctt agtgggtgat gctttaaata
    12661 ctgaagcttt tttagttcta agtcatgctc atttaaaaga tgaaatcaaa atcaaactca
    12721 tcaaaaccct tgcctttaat gcaggactta atggaatggt cataggacaa gctattgatt
    12781 gtttctttga agacaaaaga ctgagtttaa atgaacttga gtttttacat acacacaaaa
    12841 ccgcaagatt aatcgctgca gctttaaaaa tgggttgtga aatttgcgaa cttaacaacg
    12901 aagaaagcaa tcaaatttac aaacttggtt taaaactagg actgattttt caaatcaatg
    12961 atgatattat cgatgtaact acaagtcaag aacaaagcgg aaagcctact aacaacgata
    13021 ctcataaaaa ttcttttgtc aatttacttg gacttgaaca agccataaaa acaaaagaaa
    13081 atcttcttag tgaatgtgaa caagacttag aaaaacttaa tgaaaaactc gcgcaaatga
    13141 tacaaaattt aataattcaa tacttataaa ggcaaaaaat ggacattcaa attttacaag
    13201 aacaggcaaa tactctaaga tttttaagtg ccgatatggt gcaaaaagca aactcaggac
    13261 acccaggtgc acctttgggt ttagcagata ttttaagtgt tttaagttat catttaaaac
    13321 acaatcctaa aaatcccact tggctaaacc gtgatagact tgtattttca ggcggacatg
    13381 caagtgcttt gctttatagt tttttacatt taagtggcta tgatttaagc ttagaagatc
    13441 ttaaaaattt ccgccaactt cattctaaaa ccccaggaca ccctgaaatt tcaactcttg
    13501 gagtagaaat cgctacaggc cctttaggac aaggcgttgc aaacgctgta ggctttgcta
    13561 tggcagcaaa aaaagcgcaa aatttgctag gtagtgattt aatcgatcat aaaatttatt
    13621 gtctttgcgg agatggggat ttacaagaag gcatttctta tgaagcttgt tctttagcag
    13681 gacttcacaa acttgataat ttcatactta tttatgatag caacaatatc tccatagaag
    13741 gcgatgtagg tttagccttt aacgaaaatg taaaaatgcg ttttgaagca caaggatttg
    13801 aagttttaag tataaatgga cacgattatg aagaaattaa taaagcctta gaacaagcta
    13861 aaaaatccac aaaaccttgt cttatcatcg caaaaacaac tatagcaaag ggtgcaggag
    13921 agcttgaagg cagtcataaa agccatggcg cacctttggg cgaagaagtg attaaaaaag
    13981 ccaaagaaca agcaggtttt gatccaaata tcagttttca tatcccacaa gcaagcaaaa
    14041 tccgctttga aagtgctgta gaacttgggg atttagaaga agcaaaatgg aaagataaac
    14101 ttgaaaaaag tggtaaaaaa gaacttttag aaaggctatt aaaccctgat tttagcaaga
    14161 tagcttatcc tgattttaaa ggaaaagatc ttgctacaag agatagcaat ggtgaaattt
    14221 taaatgtttt agctaaaaat ttagaaggat ttttaggtgg aagtgcggat ttaggccctt
    14281 caaataaaac agaacttcac ggtatgggag actttataga aggtaaaaat atccattttg
    14341 gcatcagaga acacgctatg gcagcgatta acaatgcttt tgcaagatat ggaattttct
    14401 taccattttc ggcaactttt ttcatcttta gtgagtactt aaaacctgcc gcaagaatag
    14461 cagccctaat gaaaatcaaa cattttttta ttttcacgca tgatagcata ggcgtgggcg
    14521 aagatggccc aacacaccag cctatagaac aacttagcac ttttagagct atgccaaatt
    14581 ttttaacctt taggcctgct gatggggtag aaaatgtcaa agcttggcaa atagccctaa
    14641 atgctgatat tccaagtgct tttgtgcttt cacgccaaaa actcaaagct ctaaatgaac
    14701 ctatttttgg agatgtaaaa aacggagcgt atttactcaa agaaagcaaa gacgctaaat
    14761 ttacacttct agcaagtgga agtgaagttt ggctttgtct agaaagtgca aacgaacttg
    14821 aaaaacaagg ttttgcttgt aatgttgttt ctatgccttg ttttgaactt tttgaaaaac
    14881 aagataaaac ttatcaagaa agattgttaa aaggtgaagt tataggcgtt gaagcagcgc
    14941 attctaatga actttataaa ttttgccaca aagtgtatgg catagaaagt tttggagaaa
    15001 gtggtaaaga caaagatgtg tttgaacact ttggatttag tgtttcaaag cttataaatt
    15061 ttatccttag caaataaaat gaatgcaaat ttcaaatttc aaaataacac tctttttatc
    15121 tttggaattt gggataaaac aagtatttat aagttaaaaa taaaagattt tttagctttg
    15181 attcaaagca aggaagtgat ttttgatttt aaagatctaa aagcaatcga taccgctgga
    15241 gtaagatttt tccttgcttt ggaaaatgac cttaaagata aaaatattaa aatcaccaaa
    15301 gaaggcttaa attcacgctt tcaaaccctt tttgaacttt gtgaaaaaaa ctaccaaaga
    15361 ctaagtaaaa caaaaaaatc acataaaaat ttcagtgaat attttatcga tcttggaaaa
    15421 ttaagtttag aacttttaaa aattttaata aaattcacca atttcacagg agcttttttc
    15481 acaagtcttt ttttatgcct taaaaatcct aaaaattttc gctttattgc ttttttatat
    15541 catatagaaa attctgcttt taaagctttg cctatagtta ttttaaccgc tcttttagta
    15601 ggagtggttt tagcctatca ggctgcttat caactcgcac aatttggagc caatattttc
    15661 atagtggatt tgatgggaat ttcagccact agagaacttg cacctttaat cgctgccata
    15721 gtgatcgcag gaagaagtgc aagttcttat accgcacaaa ttggagtgat gaaaatcact
    15781 gatgaaattg cagctatgaa tactatgggt tttcgttctt ttgaatttat tattattccg
    15841 cgtgttatgg ctttggtagt ggctatgcct ttaatcgttg ccattagcga tgcgatcagt
    15901 attataggtg gaatgatggt tgcaaaatta aatcttgata tttcttttgc cgaattttta
    15961 agacgcttta gagaagctgt agatataaaa catatcttta taggacttgc aaaggcacct
    16021 atttttggat ttttaatagg acttattgct tgttttcgtg gttttgaggt aaaaaacact
    16081 acacaaagca taggaattta tacaacaaaa agcgttgtaa atgctatttt ttgggtgata
    16141 gcttttgatg ctttattctc tgttgtttta acttctgcag gaatttaaat ggttattaaa
    16201 gcgcaaaata tcattacaaa atttggagaa aaaattgtcc atgatggcgt aagttttgaa
    16261 atcaaaaaaa atgaaatttt tggtatttta ggaagtagtg gaagtggaaa atccgtcctt
    16321 ttaaaacaaa tgcttatgct tgaacatttt gatggtggag aatatgaaat tttaggctat
    16381 aaacttaaaa atatcgacga agaagatgca cttgctttgc gtaaaaaatg gggtgtggtt
    16441 tttcagtttg ctgcactttt tagctttttt aatgtttatg aaaatatcgc tattccttta
    16501 aaagaataca ctcatttaga tgaaaatagc atacaagaac tggttttaat gaagctaaaa
    16561 atggtaggct taaacgaaag tgttttaaaa caatttccaa gcgaacttag tggcggtatg
    16621 caaaaaagag tggcaattgc tagagcttta gcacttgata gtaaattgct ttttttagat
    16681 gaacctactt caggacttga ccctcatagt agtcgcgaat ttgacgattt ggttttagag
    16741 ttaaaaaaaa gttttgattt aaatatcatt ttggttacac atgataaaga aagtatgaaa
    16801 aatttactcg atcgctttat cattttagaa aataaaaaag ttggattttg cggtacttac
    16861 gaagaattgc gcttgcaaaa tgaacgactt tttaaaaaat ttatggagta aaagtggaaa
    16921 atagagcaaa ttattttttt gtaggacttt ttgtttttgg agtatttttt gcaagtcttg
    16981 gtttcatact ttggcttggg ggatactcca aagaagaaag ttttaagtat tatgaaattc
    17041 acacacaaga atccgttgca ggacttggta taaaagcacc cgtaaggctt ttgggcgtgg
    17101 aagtaggtag cgtggaagaa atcagcattt acaatcaaga tgaactcggc gttaatatac
    17161 gcatcaaggt caaaaacaat acccctataa aagaagacac ctttgctact ttacaacttc
    17221 aaggtatcac aggacttaaa tttatccaac ttcaaggcgg aagtaaaaat agtaaagatc
    17281 tagtatctat ccacggaaaa cttccagtca ttccttttaa agaaagtttt ttagcaacca
    17341 tagacagaca aagtgaacat attttttctt tggttaaaac ggccgatgat aaatcaaaag
    17401 aacttttaag cgaaaaaaat cttaaaaatc tagaaatcct tttgcaaaat ctagcagaat
    17461 taagtgcaaa tttaaacgct aattctaaaa atttaagtct taatctttca aacgcaagtt
    17521 taaaaatagg aaaaatggct gataatataa gccttagtgc gcaaaatttc aactccagtc
    17581 ttaaaaacat aaaagaaagc acaatgattt taaaaaattt cataaaaaaa gctgatgaaa
    17641 aattaaacac ttatgatgat attaaagcat ctttgatgca aaatttagaa ctttttaaac
    17701 gggttttaat tgaaagcaat attctaatag aaaatttaca aaacagccct gctgatttga
    17761 tttttaaaga aactaaacct aaacttggac caggagaaaa ataatgctaa agcaaatatt
    17821 ctatattttt acttttattt ttatattatg cggatgctct ttaaaacacg aaaccatcaa
    17881 taaaaatgaa aatatcatat taaaagatga aggaatagac tcaaatattt tttttaaaaa
    17941 aaccggtaaa attcttaaaa ttcgcaatgc aaatacacct ttgtatttaa actcaagagc
    18001 tattgtttat atagataatg gttttagcaa caaatatgca cattatttct ggggagattt
    18061 gccaagcaat ctttattctt ttttaatttt gtcaaaattt gaacaaagca atatttttac
    18121 aaccttactt tcttcaacaa gctctttaaa tgcggattat gcccttgaga gcaggattaa
    18181 ttcttttgag caaattctta gcaacaatga aaactacgct caaatttcta taagtgtaaa
    18241 tttcataaat cttgaaaaca atcagataat agctcataaa attttcaata ctaaagaaaa
    18301 aatagaaaaa aaagatatcc gctctactta taatgctttt caaaaagcct tgaataaaat
    18361 tggcaatgag attatttttt gggtaaattc taacttatcc taatttagga acactttttg
    18421 ctttttaaat atttagcaat atttttgaaa ggtaaacaat gaaaagtgat ttagaaatat
    18481 ttaaaaaaca cttaggcgaa attcaaggcg tgaatgaatt taaagcaaat caaatttgct
    18541 ctcaaatcaa tgatgcaaat gattttatag gagcacttca agtgcttgat atgtctttaa
    18601 aaaaaataga aaaaagcatt ctagaaagaa tagatgaaaa ttcagatgat atgcaaaaaa
    18661 gaactcttga tgccacagca tcacaactta tacaaaactg ctctttcatg ggaacagccc
    18721 tttttggaaa tattttcaat gtttatgttg gtaaaaaact ttttgaattt gaaattgcta
    18781 atccactttt aattcttcaa acaagtaatt acgaaggtgt attggcctat atacaagata
    18841 aaagagatga aataaaaatc attctatcag agttagcaac cacaattacc atgggcgaaa
    18901 ctatggataa tactggaatt tataactcta caatggattt taaaaattta tttaaataag
    18961 aatagtaatc gtttgttctc tttaagcaaa tataatatat tttagcttaa agagattttc
    19021 caaactctta aaagagagtt aggctacgaa taaaaagggg gagggaaata gcctaaccca
    19081 aacgagatct taaaagatct ctttaaacta aaataaatat ttagataatt taat
//
LOCUS       DAPWGO010000027        18347 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.028, whole genome shotgun sequence.
ACCESSION   DAPWGO010000027 DAPWGO010000000
VERSION     DAPWGO010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18347
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.028"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            92..1516
                     /locus_tag="RJ336_000829"
     CDS             92..1516
                     /locus_tag="RJ336_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDZ5213287.1"
                     /translation="MDFLTSLSEGGQFAIQIIIVLICLFYGAKKGGIALGLLGGIGIL
                     MLVFAFHIKPGKPAIDVMLTILAVVVASATLQASGGLDVMLQIAERILRRNPKFLTIL
                     APFVTCFLTILCGTGHVVYTIMPIIYDIAIKNGIRPERPMAAASISSQMGIIASPVSV
                     AVVSLTALLLNANHKLAGFDGYINLLQITIPSTLFGVLCIGIFSWFRGKDLDKDEVFQ
                     EKLKDPEFKKYVYGDSKTLLGVKLPKSNWVAMWIFLGAIALVALLGVFDFLRPNWGQV
                     VKNGIPQVDALGNPKMDVLSMVSVIQMFMLLAGSLIIIFTKTDAKKIGSNEIFKSGMI
                     ALVAVFGISWMADTMFAVHTPMMKAALGDIVKEHPWTYAVMLLLISKFVNSQAAAISA
                     FVPLALGIGVEPGVIVAFAAACYGYYILPTYPSDLATIQFDRSGTTHIGKFVINHSFI
                     LPGLIGVITSCIAGYFIAMAAGYL"
     gene            1658..1845
                     /gene="kdpF"
                     /locus_tag="RJ336_000830"
                     /pseudo
     CDS             1658..1845
                     /gene="kdpF"
                     /locus_tag="RJ336_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344095.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
     gene            1855..3546
                     /gene="kdpA"
                     /locus_tag="RJ336_000831"
     CDS             1855..3546
                     /gene="kdpA"
                     /locus_tag="RJ336_000831"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit A"
                     /protein_id="HDZ5213288.1"
                     /translation="MLEILITLIIAFILALIFGNYLYKIASCKKTIFDFIFNPIDNLI
                     YKICAIDRKNMTWQKYSLHLIAFNALVAIFSFVIFYLQDKLFLNPNLINSMKGDLNLN
                     TVISFITNTNLQHYSGESALSLLSQNTGILLAMFVSSASGYSACMAFCRALCGMQMGN
                     FYEDFTRIITRLMLPLSFILAVIFISEGVVQNYHANFSVLTLENKFQSIATGPVAALE
                     SIKHLGTNGGGFFGANSSMPFENPTSLTNFLQILSMMLIPSACVVAFGLMVYHRKERQ
                     GFALMGKEGGVIFGAMGIIFIISLLLIYFSEKMSNPNLDSLGLNANLGNLEGKEIRFG
                     TDGSSLFSAVTTAFTTGSVNNMHDSLNPLSISATLLNMMLNVAFGGEGVGLMNMIIYV
                     LLTVFICALMIGRTPEFLGKKIESAQMKLIALVILIHPLLILVLSALAVVFAKDSISN
                     PSFHGLAQILYEFSSSAANNGSGLEGLKDDNLFWNLSTAFAMFCGRYLVLIAQLAIAG
                     SLLAKNTQENTANSLKTDNLTFMFVLVCIIYIFTALTFFPVLTLSSVAEYLSLWH"
     gene            3556..5601
                     /gene="kdpB"
                     /locus_tag="RJ336_000832"
     CDS             3556..5601
                     /gene="kdpB"
                     /locus_tag="RJ336_000832"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HDZ5213289.1"
                     /translation="MSKKQNKLITKEILNNAIKGAFLKFDPRFMVKNPVMFMVEVGLI
                     LTLILSIFPTLFNGNSDERIYNILITFILFITLLFANFAESIAEGRGKAQAATLRQSK
                     KDSKARRIKSDGSEEMLNSSELKIGDIVLVKAGELIPNDGEIIEGAASVDESAITGES
                     APVMREAGGDFSSVTGGTTVLTDFLKIKILVGAGESFLDKMINLVEGAARQKTPNEIA
                     LNTLLIVLSLSFLVVVVSLYLFMQFLGVSLPISWLVALLVCLIPTTIGGLLSAIGIAG
                     MDRVTRFNVIALSGKAVESCGDVDTMILDKTGTITFGNRLANEFYEVQGISKEEMIKA
                     CVLSSLKDETPEGKSIVALAQKMGYELEGNDIKEFIEFSAQNRMSGVDLQDNTKIRKG
                     AFDAIRAYISEMNGKIPSDLETKVMEISNLGGTPLVVCKNEKILGVIYLKDTVKPGLK
                     ERFDELRKMGIKTLMCTGDNPLTAATIAKEAGLDGFIAECKPEDKIEAIKKEQAQGKI
                     VAMTGDGTNDAPALAQADVGIAMNSGTQAAKEAANMIDLDSNPTKILEVVEIGKGLLI
                     TRGSLTTFSMANDIAKYFTILPAMFSVVLPQMQILNIMHLATPQSAILSALIFNAIII
                     PLLIPIAMRGVKFKPMKSEHLLLRNLSIYGLGGMIAPFIGIKIIDIPTAWILRILGV"
     gene            5603..6211
                     /gene="kdpC"
                     /locus_tag="RJ336_000833"
     CDS             5603..6211
                     /gene="kdpC"
                     /locus_tag="RJ336_000833"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpC"
                     /protein_id="HDZ5213290.1"
                     /translation="MLRTLLSFFVVMLILCTLIYPFALNTVAKFIFPYQSSGSLVDKE
                     GRPTLDISKAVGSKLLGQDFNKPYFLHSRASVSNYNTSDTNESSVSSGGFNYAMSNPA
                     LKERVQKDLQKFLDENPQITKEQIPLDLLSASGSGLDPHISLQAALVQIPRISQSSKI
                     TKEELEKIIQENTESKFLGIFGEEKVNVLAVNIAIAKAMKKE"
     gene            6214..8145
                     /locus_tag="RJ336_000834"
     CDS             6214..8145
                     /locus_tag="RJ336_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HDZ5213291.1"
                     /translation="MQRQSPEQILKKLEVKAKEEEKNKLAKLKIFLGYAAGSGKTYAM
                     LSEARTLRDNGVDVVLGYIEPHDRPETMALTQGFESIANLEIPYKNIVLKEFDLDATL
                     KRKPALVLVDELAHTNAKGLRNEKRFQDIEELLKAGIDVYTTLNIQHLESLNDLVANI
                     SKIEVKERIPDRIFDEADQVELVDIEPNKLLKRMQDGKIYKEKQAKLALENFFRQERL
                     IALREIALRRLASRVNLRASEQRLINDDLAYHTGEHILVCINASNAKVIRAAARLALA
                     FHAKLSALYIKNPNIKEEKALEENIELAKSFDAEIISVYDDDIARQIAEYSSLSNVSK
                     IVLGKNKDKKKFKEEIFEAVAKKAPNIDLYLVNENQISTPKIRSKKGFDFLGFLKITG
                     VLLLATFIAFVFHKFNTQPSNIVMIFILAVFASSFISDNKIFAFYSSLVSVLIYNFFF
                     LEPIFSLKVHDSGNIITFTTMFIVGFLTAVFTRRLKLQSKELTKRAYRTAILLENSEK
                     LARVKSKQELWEQLGNQALKLLNLPIIIYPINKNNILSKPLLFFNDDKQMLKNCFSAD
                     EIAIAQWVATNKERAGVCTNTLPNANAMYLPIEDGEKTKGVIGIVLKEKRPLQDFQYE
                     ILSALLNEAGVRTRDIFLL"
     gene            complement(8140..10113)
                     /gene="uvrB"
                     /locus_tag="RJ336_000835"
     CDS             complement(8140..10113)
                     /gene="uvrB"
                     /locus_tag="RJ336_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HDZ5213292.1"
                     /translation="MLELTSEFKPSPDQQEAIKGIVKSIKKGNKYQTLLGVTGSGKTF
                     TMANVIKELNIPTLIMSHNKSLCAQLYSEFKGFFSKNHVEYFISYYDYYQPEAYIPRT
                     DVFIEKDSSTNEDLERLRLSTTASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
                     GMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDEL
                     DAMYHYNVLENKKGKDLKRFILYPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENK
                     LVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPYTLFDYFAIKDRKFL
                     VIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKNCQFLFV
                     SATPAPLELELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVL
                     VTVLTKKLAEELTRYYLELGIKVKYMHSDIDAIERNEIIRGLRSGAFDMLIGINLLRE
                     GLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKSMQEAMD
                     TTNERRKLQMAYNKKYNITPTSVKRHIEESLKNEEDLGEIYRKGKKLEKMPASERAKL
                     VKELRKQMLEAAKALEFEKAAAIRDEINKLRDL"
     gene            10267..10497
                     /locus_tag="RJ336_000836"
     CDS             10267..10497
                     /locus_tag="RJ336_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213293.1"
                     /translation="MFDEKIINTMTDKVNELIEKYNEVCEANEALRNELVSVKAQNEA
                     KSNQIMRLEEELKSRNIESEDIYKKIEAVLGR"
     gene            10487..10729
                     /locus_tag="RJ336_000837"
     CDS             10487..10729
                     /locus_tag="RJ336_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213294.1"
                     /translation="MADNLKQVIVNVNAKDFIVKCSEEFANFLEDDIALISGGTKKIE
                     LKRFVDAFVKKSYENYILERELKKLIKAINEELPTK"
     gene            10726..11163
                     /locus_tag="RJ336_000838"
     CDS             10726..11163
                     /locus_tag="RJ336_000838"
                     /inference="COORDINATES: protein motif:HMM:NF019575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDZ5213295.1"
                     /translation="MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDY
                     EMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEKLFYCLNDCDYSLLDTPIYSDFK
                     SWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI"
     gene            11145..12998
                     /locus_tag="RJ336_000839"
     CDS             11145..12998
                     /locus_tag="RJ336_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDZ5213296.1"
                     /translation="MQRSDIRYYELAICGLYLDNLTFHSFDEIKPLTQVLVDLKTKKN
                     LKAIVLKECQKPDFKTVEIKEITKYFLTPLQFELANFIVYYYASKLGFVLGFFETSPK
                     YECQKMFFKDTPKLSNQQQNALSFLQKENNSLLFADTGSGKTEIYISLIKECLEQGKQ
                     ALLLMPEIALTPQMKKRLEVYFKDNFFLWHSKISKKKKQEYLERFCKGEVLLVAGARS
                     ALFLPFRNLGLIVVDEEHDNSYKASNQPFINARDLALFLGQKNNIKVVLGSATPSLTS
                     FYKQKSFRLKGTFFESKKHFLYDENELGITPMLLSELEKSLKHQKQAIVFLPTRANFR
                     QIICKDCGETIKCPFCSIAMSMHKKKNVLKCHYCNYTSLIEQNCPSCKGEMLEARKMG
                     TAELLELLQNALPLAKIAKFDSDEITSVKKLNTILKDFNENKIDILIGTSMLAKGHDY
                     HSVDLSVILGLDEYLLRPSFRASEETLALAMQVAGRAGRKGEARVLLQTKNRAFFERY
                     IEDYDAFLKDELENRKDLYPPFKRLLRVLIEDKDQKNAQKLCEKLAYQFKNIKQVELV
                     GYGICGVEMLHGKYRFYLLLRSENYKALVAIENYILQFKNVSADIDPIDFI"
     gene            complement(12991..13749)
                     /locus_tag="RJ336_000840"
     CDS             complement(12991..13749)
                     /locus_tag="RJ336_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002877674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP:phosphoglutamine cytidylyltransferase"
                     /protein_id="HDZ5213297.1"
                     /translation="MNAIILAAGFGSRLMPLTKDQPKCMVEYKNKKIIDYEIEALKSA
                     GINEIAVVGGYLNDVLKNYLNKYDIEHFFINSKYDKTNMVHTFFCAKDFILKCIEEKQ
                     DLIISYADIVYFQDCVQKLINAKEELAIVVDKSWRKLWNKRFANPLEDAETLKMTNGY
                     IIELGKKANAYDEIEAQYIGLFKFSYQFLSEVIAFYEMLDRDILYDNKNFENMYMTSF
                     LQALIEKYNNAKAVEIDGNWCEIDFMSDLKINFI"
     gene            complement(13751..14353)
                     /locus_tag="RJ336_000841"
     CDS             complement(13751..14353)
                     /locus_tag="RJ336_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HDZ5213298.1"
                     /translation="MFIGITQRLIYNESYHEERECLALDWGKLFNKDLFKNFTPLPLS
                     YEIDFSHYKHLIKAVILSGGNDLSFYSPNVLSKKRDLYEKQVIEICLKEKIPLLGICR
                     GAQMIAHYFNSHISPCENHIGKHEVFFSKEKFISNSFHNFAIEKLGEDLVELCLAKDN
                     TIEAFKHKYENIFGIMWHIERENGLNNIQILKEWFSLIKE"
     gene            complement(14344..16683)
                     /locus_tag="RJ336_000842"
     CDS             complement(14344..16683)
                     /locus_tag="RJ336_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213299.1"
                     /translation="MAELKFKTKAQNLKNLQTKLKKAKVLSLVLTSLEELISNEDKVL
                     QDIQTLKANRLIIRSSSLNEDSMKNSNAGAFLSLANIKADSKDELLKALYEVANSMPS
                     KSDEILVQPMLENITLCGVGFSVDKDNFSPYFCLQYDENGSNSSITDGSSKSAKTYYH
                     YRDYLEFKDIRLQKIIELIKELEVLYNCCFLDVEFAFAIQDDEEELFCLQVRPLVMHE
                     KNNLFHSLPKEALYRFYKRFESLKESRSRVLGDKAIFGVMPDWNPAEIIGLRPKRLAF
                     SLYKEIITDNIWAYQRDNYGYRDLRSHPLIHSFLGIPYVDVRLSFNSFIPKKLDENIA
                     QKLVNFYLDKLNKNHELHDKIEFNIVYSCYDFNSSKKLEELLNHGFNENEIKRLEFSL
                     LELTNKIINPRSGLYLKDIQKAYKLKERYDGIINSNFSLIDKIYWLIEECKRYGTLPF
                     AGVARAAFVAMQLLNSLVEIDFITKEEKDDFLNSLNTVSKNLSKQTNHLNFHNKDQFL
                     KDFGHLRAGTYNILSPRYDEDFELYFDVDQKDSKVYLQDKAFVFSEEKTKALNALLRE
                     HGLEINACEFFDFLKQAIEGRELVKFEFTRLLSKAIVYIEELGKYYGIEKEDLAHLDI
                     KSILNLYSSLYSINPKEQFVEEINRNKKEYELTQAIKLPSLLCNADEIFSFYNHSIIP
                     NFITQKSITAFTAKENDKDLEGKIVLIYAADPGYDYLFTKNIAGLITCYGGANSHMAI
                     RASELGMPAVIGVGEENFEKYLKAKKINIECESEQIFCL"
     gene            complement(16698..17459)
                     /locus_tag="RJ336_000843"
     CDS             complement(16698..17459)
                     /locus_tag="RJ336_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDZ5213300.1"
                     /translation="MQKLVEQVWDYTKHAKFYSYRPNYAPKTIDMLISLVGKKDIKVA
                     DIGAGTGNLSIMLLERGCKVVSVEPNDAMREIGIERTKGEKVDWVRATGLNSTLQNSE
                     FDWVTFGSSFNVMDRNEALEEAHRLLKSEGYFSCMWNHRDLNDPVQKIAEDTIVEFVP
                     NYTRGTRREDQRPIIESRKDLFDNIVYIEEDFYFHQSIENYINAWKSVKNPYWDLEAD
                     EGNELFNKISDKISQRLPKEFSIKYTTRCWSAKKI"
     gene            complement(17512..18285)
                     /locus_tag="RJ336_000844"
     CDS             complement(17512..18285)
                     /locus_tag="RJ336_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDZ5213301.1"
                     /translation="MKQGDFTEVAKHYHNRPAYSPFLLEKLVACINDKNKNLKDLNIV
                     EVGAGTGKLTKMLGEMFGCQISAVEPNDNMREEGQKFTQNLSNISWHKGSGEETCMSN
                     NQADWVIMASSFHWTDPKKSLPEFNRILTGGGYFTAIWNPRHIVEGSVFDEIEKEIKH
                     IVPELARVSSGTQNVKKWEEILVSTGDFTDCFFMECDYKEFWDKERYLGAWHSVNDIQ
                     AQAGEKRWKEILEMIEAKISHMQSIEIPYKIRAWTARKA"
BASE COUNT         6070 a         2699 c         2929 g         6649 t
ORIGIN      
        1 tattgtttta tttttagaaa tattattctt taatttaaaa atgtgataca ataataactg
       61 tttttaaata tcaattttca aaggagttaa aatggacttt ttaacaagcc ttagtgaggg
      121 agggcaattt gcaatccaaa tcattatcgt tttaatttgt cttttttacg gtgcaaaaaa
      181 aggcggcata gcgcttggtt tacttggtgg tataggtatt ttaatgcttg tatttgcttt
      241 tcatataaag cctggaaaac cagccataga tgttatgctt acgattttag cggtagtggt
      301 tgcgagtgca actttgcaag caagtggtgg tttggatgtt atgcttcaaa tagcagaaag
      361 aattttaaga cgcaatccta agtttttgac aatattagcg ccttttgtaa cctgcttttt
      421 gaccatactt tgcggaacag gacatgtggt ttatactatt atgcctatta tttatgatat
      481 agcgattaaa aacggtattc gtcctgagcg tccaatggcg gcagcttcta tatcatcaca
      541 aatgggtatt attgcatctc ctgtatctgt ggctgttgtg agtttgactg ctttgctttt
      601 aaatgctaat cataaattag caggttttga tggttatatt aatcttcttc aaattaccat
      661 acctagtaca ttatttggtg tattgtgtat aggaattttt tcttggttta gaggaaaaga
      721 tttggataaa gatgaagtat ttcaagaaaa acttaaagat cctgaattta aaaaatatgt
      781 ttatggggat tctaaaacac ttttaggtgt taaacttcca aaaagcaatt gggttgcaat
      841 gtggattttc ttaggagcta ttgctttagt ggctttatta ggtgtatttg atttcttgcg
      901 tccaaactgg gggcaagttg taaaaaatgg cattcctcaa gtagatgctt taggcaatcc
      961 taaaatggat gttttatcca tggtttcagt tattcagatg tttatgcttt tagcaggttc
     1021 tttgattatc atctttacta aaacagatgc aaagaaaatc ggctctaatg aaatttttaa
     1081 atcaggtatg atagcacttg ttgcggtttt tggaatttct tggatggctg atactatgtt
     1141 tgcagttcac actcctatga tgaaagcagc gcttggagat atagtaaaag agcatccttg
     1201 gacttatgct gtaatgcttc ttttaatttc aaaatttgta aactctcaag cagcggctat
     1261 ttcagctttt gttcctttgg ctttaggaat tggtgttgaa cctggtgtaa ttgttgcctt
     1321 tgcggctgct tgttatgggt attatatttt accaacttat ccaagcgatt tagctactat
     1381 acaatttgat agatcaggta ctactcacat cggtaaattt gttatcaatc atagttttat
     1441 tttaccaggt cttataggtg taatcacttc ttgtatagca ggatatttta ttgctatggc
     1501 agcgggttat ctttaacaat ttttagcagg atttttcctg ctaaattttt catttgtctt
     1561 tttatttaat atagataaaa attataaata aatcataaaa ttagtattaa tcaaaatata
     1621 agcttaacaa ggatagaata aatcctattt tgaatcaatg agaaagggct atcctatgga
     1681 tgttatcttt gctttgcttc tgcttttagc ttttggtagt ttatggtttt ttatccgttt
     1741 ttgtgaagtt caaactagga cacgcggatg atatttttac tagttttaag cttaatactt
     1801 gctctttatt tattttatgc tctattatat cctgaaaaat tttaaaggaa aaatatgcta
     1861 gaaattttaa taacactgat tatagctttt atattggctt taatttttgg aaattatctt
     1921 tataaaattg caagctgtaa aaaaactatt tttgatttta tttttaatcc aattgataac
     1981 ttaatttata aaatttgtgc aattgataga aaaaatatga cttggcaaaa atattctttg
     2041 catttaattg cttttaatgc cttagtggct attttttctt tcgtgatttt ttatttgcaa
     2101 gataaacttt ttttaaatcc caatttgata aattctatga aaggggattt gaatttaaat
     2161 actgtaatta gttttattac aaatacaaac cttcagcatt atagtggaga gagtgcttta
     2221 agtttgcttt cccaaaatac aggcatttta cttgctatgt ttgtttcaag tgcaagtgga
     2281 tattctgctt gtatggcttt ttgtcgtgct ttatgtggta tgcaaatggg aaatttttat
     2341 gaagatttta cgcgtattat tacgcgtttg atgttacctt taagttttat tttggctgta
     2401 atttttatct ctgaaggcgt ggtgcaaaac tatcacgcaa attttagcgt gcttacttta
     2461 gaaaataaat ttcaaagcat tgccacaggt cctgttgcag ctcttgagtc tataaaacat
     2521 ttagggacaa atgggggtgg tttttttggt gctaattcaa gcatgccttt tgaaaatcct
     2581 acttcactta caaatttttt acaaatttta tccatgatgc ttattcctag tgcctgtgtt
     2641 gtagcttttg gattgatggt ttatcataga aaagaaagac aaggttttgc tcttatggga
     2701 aaagaagggg gagttatttt tggtgcaatg gggattattt ttatcatttc tttgctttta
     2761 atttatttta gcgaaaaaat gtcaaatcca aatttggatt ctttgggttt aaatgcaaat
     2821 ttgggaaatt tagaaggtaa agaaataaga tttggcacag atggttcgag tttatttagt
     2881 gctgtaacta ctgcttttac tacaggaagc gtcaataata tgcacgatag tttaaatcct
     2941 ttaagcatca gtgctacttt gctaaatatg atgttaaatg tggcttttgg tggcgaagga
     3001 gtagggctta tgaatatgat tatttatgtg cttttaaccg tgtttatttg tgcattaatg
     3061 ataggcagaa ctccagaatt cttgggtaaa aaaatagaaa gcgcacaaat gaagcttata
     3121 gctttggtaa ttcttatcca tcctttatta atccttgttt taagtgcatt agctgttgtt
     3181 tttgcaaaag atagtataag caatcctagc tttcatggct tggctcaaat tttatatgaa
     3241 tttagttctt cggcagcaaa taatggttca ggacttgaag gtttaaaaga tgataattta
     3301 ttttggaatt taagtacagc ttttgctatg ttttgtgggc gttatttggt tttaatagct
     3361 cagcttgcta tagctggatc gcttttggct aaaaatacac aagaaaatac tgcaaattct
     3421 ttaaaaacgg ataatttaac ttttatgttt gtgcttgttt gtattatata tatttttact
     3481 gcacttactt tttttccagt gcttacttta tcaagcgttg cagaatattt atctttatgg
     3541 cattaaggag agtcaatgtc taaaaaacaa aataaactca ttacaaaaga aattttaaat
     3601 aatgccataa aaggagcatt tttaaaattt gatccacgct ttatggtaaa aaatcctgtt
     3661 atgtttatgg tggaagttgg attgattctt actttgattt taagtatttt tcctactttg
     3721 tttaatggaa attctgatga aagaatttat aacatcttaa tcacttttat tttatttata
     3781 accttgcttt ttgcaaattt tgcagaaagt attgcagaag gaaggggtaa agcccaagca
     3841 gctaccttaa gacaaagcaa aaaggattct aaagctagac gcataaaaag tgatggcagt
     3901 gaagaaatgc ttaattctag cgagttaaaa ataggtgata tagttttagt taaagcaggt
     3961 gaacttatac ctaatgatgg agaaattata gaaggtgctg caagtgttga tgaatcagct
     4021 attacaggtg aaagtgctcc tgttatgcgt gaagcgggcg gtgatttttc ttctgttaca
     4081 ggtgggacta cggttttaac tgatttttta aagattaaaa ttttagttgg agctggggaa
     4141 agttttttag ataaaatgat caatcttgta gaaggtgctg cgcgtcaaaa aactccaaat
     4201 gaaattgctc ttaatactct tttaattgtt cttagtttga gttttttggt ggtggttgta
     4261 agtttatatc tttttatgca atttttaggc gtgagtttgc ctatttcgtg gttagtagca
     4321 ttgcttgtat gtcttattcc tacaactata ggggggcttt tatcagctat aggaatagca
     4381 ggtatggata gggtaacgcg ttttaatgtg atcgcacttt caggcaaggc tgttgaaagt
     4441 tgtggtgatg ttgatactat gattttggat aaaacaggaa cgattacttt tggaaaccgt
     4501 ttggcaaatg aattttatga agtccaaggt ataagtaaag aagaaatgat taaagcttgt
     4561 gttttatcct ctttaaaaga tgaaactcca gaaggtaaaa gcatagttgc attggctcaa
     4621 aaaatgggtt atgaattaga aggtaatgat attaaagaat ttatcgaatt tagcgctcaa
     4681 aatagaatga gtggtgtgga tttacaagat aatacaaaaa ttcgcaaagg tgcttttgat
     4741 gctataagag cttatataag cgaaatgaat ggaaaaattc ctagcgattt agaaactaag
     4801 gtaatggaaa tttcaaatct tggtggcact cctttggtag tgtgtaaaaa tgaaaaaatt
     4861 ttaggagtga tttatctaaa ggatacagta aaaccaggac ttaaagagcg ctttgatgag
     4921 cttagaaaaa tgggcataaa aactttaatg tgtactggag acaatccttt aacagcagct
     4981 actatagcta aagaagcagg gcttgatgga tttatagcag aatgcaagcc tgaagataaa
     5041 atagaagcca ttaaaaaaga acaagctcaa ggtaagatag tagccatgac aggagatgga
     5101 accaatgatg ctccggctct tgcacaagct gatgtaggta tagctatgaa ctcaggaact
     5161 caggcggcca aagaagcagc caatatgata gatcttgatt ctaatcctac taaaatttta
     5221 gaagtggttg aaataggaaa aggtttgctt attactagag gcagtcttac aacttttagt
     5281 atggcaaatg atattgctaa gtattttact attttacctg ctatgtttag tgtggtttta
     5341 cctcaaatgc aaattttaaa tattatgcat ttggctaccc cgcaaagcgc tattttatca
     5401 gcacttattt ttaatgctat tattatacct ttgctcatac ctattgctat gcgtggagtt
     5461 aaatttaagc ctatgaaaag tgagcatttg cttttaagaa atttgagtat ttatggttta
     5521 ggtggtatga tagcaccttt tatagggata aaaataattg atattcctac agcttggata
     5581 cttagaattt taggagtgtg atatgcttag aactttgctt agtttttttg tggtaatgct
     5641 aatattgtgt actcttattt atccttttgc tttaaatacg gttgcaaaat ttatttttcc
     5701 ttatcaatca agtggaagtt tagtggataa agaaggtcgt ccgactttgg atataagcaa
     5761 agcggtaggt tcaaagcttt tgggtcaaga ttttaataag ccttattttc tacattcaag
     5821 agcatctgta tcaaattaca atacaagtga tacaaatgaa agcagtgtaa gttcaggtgg
     5881 atttaattat gctatgtcaa atcctgcttt aaaagagcgt gtgcaaaaag atttgcaaaa
     5941 atttttagat gagaatccgc aaattacaaa agaacaaatt cctttggatt tgttaagtgc
     6001 ttcgggatca ggacttgatc ctcatatcag tcttcaagca gccctagtgc aaattcctag
     6061 gataagtcaa tcttcaaaaa ttaccaaaga agaactagaa aaaatcattc aagaaaatac
     6121 cgagtctaaa tttttaggga tttttgggga agaaaaggtt aatgttttag ctgttaatat
     6181 agctattgct aaagccatga aaaaagaata aacatgcaaa gacaaagtcc tgaacaaatt
     6241 cttaaaaaac ttgaggttaa agccaaggaa gaagaaaaaa acaaacttgc aaaattaaaa
     6301 atcttcttag gttatgctgc aggttctgga aaaacttatg ctatgttaag tgaagctaga
     6361 actttaaggg ataatggagt tgatgttgtt ttaggctata tagagcctca cgatagacct
     6421 gaaacaatgg ctttaacaca aggttttgaa agtatagcta atcttgaaat tccttataaa
     6481 aatatagtat taaaagaatt tgatttagac gctaccctta agagaaaacc tgctttggtt
     6541 ttagtagatg agcttgcaca cactaatgct aaagggttgc gtaatgaaaa gcgttttcaa
     6601 gatatagaag aacttctaaa agcagggatt gatgtttata ctactttaaa tatacaacat
     6661 ttagaaagtt taaatgattt agtcgctaat atcagtaaga tagaagttaa agagcgtatt
     6721 cctgatcgta tttttgatga ggctgatcag gttgaacttg ttgatattga acctaataag
     6781 cttttaaaaa gaatgcaaga tggtaaaatt tataaggaaa aacaagctaa actagcactt
     6841 gaaaatttct ttcgtcaaga aagacttata gctttgcgtg agattgcctt aagaagactt
     6901 gcttcaagag tgaatttaag agcaagtgaa caaaggctta ttaatgatga tttagcttat
     6961 catactggag agcatatttt agtttgtatt aatgcttcaa atgcaaaggt tattcgtgca
     7021 gctgcaagac ttgctttagc ttttcatgct aaattgagtg cgctttatat aaaaaatccc
     7081 aatattaaag aagaaaaagc cttagaagaa aatatagaac tagctaaaag ttttgatgct
     7141 gaaatcatta gcgtatatga tgatgatata gcaagacaaa ttgcagagta ttcaagcctt
     7201 agcaatgttt ctaaaattgt tttaggtaaa aataaagata aaaaaaagtt taaagaagag
     7261 atttttgaag ctgttgctaa aaaagcacct aatattgatt tatatcttgt taatgaaaat
     7321 caaatttcta ctcctaaaat acgaagtaaa aaaggttttg attttttagg ttttttaaaa
     7381 atcacaggag ttttgctttt agcaactttt atagcttttg tatttcataa atttaatact
     7441 cagccaagta atatagttat gatttttatt ttagcagttt ttgcttcttc ttttatttct
     7501 gataataaaa ttttcgcctt ttattcttct ttggtaagtg ttttgattta taattttttc
     7561 tttttagaac ctatttttag tcttaaagtt catgatagtg gaaatattat tacttttaca
     7621 actatgttta tagttggatt tttaacagct gtttttacta gaagattaaa attgcaatct
     7681 aaagaactca ctaaaagagc ttatagaacg gctattttgc ttgaaaatag tgaaaagtta
     7741 gcaagagtga aaagcaaaca agagctttgg gaacaacttg gaaatcaagc tttaaaatta
     7801 ttaaatttac ctattattat ttatcctata aataaaaaca atattttatc gaaacctttg
     7861 ttgtttttta acgatgataa gcaaatgtta aaaaattgtt ttagtgctga tgagattgct
     7921 attgctcaat gggttgcaac aaataaagaa agagcaggtg tttgtacaaa taccctgcct
     7981 aatgctaatg ctatgtattt acctatagaa gatggggaaa aaactaaagg ggtcataggt
     8041 atagttttaa aagaaaaacg tcccttgcaa gactttcagt atgaaatttt aagtgcttta
     8101 cttaatgagg caggagttag aacaagggat atatttttat tataaatccc ttaatttatt
     8161 aatctcatct ctaattgcgg cagctttttc aaactcaagt gcttttgctg cttcaagcat
     8221 ttgctttctt aattctttga caagttttgc tctttcgcta gcaggcattt tttctagttt
     8281 tttacctttg cgataaattt cgcctaaatc ctcttcattt ttcaaactct cttcaatatg
     8341 gcgtttgact gaagttgggg taatattgta ttttttatta taagccattt gaagtttgcg
     8401 gcgttcattg gtggtatcca tagcttcttg catggatttt gtgatttttt tgcaaaaaag
     8461 caaaaccttg ccattgacat ttctagctgc tcttcccatg gtttggatta aacttgtagt
     8521 gcttcttaaa aagccttcct tatctgcatc cataatggca atgagtgaaa cttcaggcaa
     8581 atcaagtcct tctctaagta agttaatgcc aattagcata tcaaaagcac cgcttcttaa
     8641 acctcttatg atttcattgc gttctatagc atcgatgtct gagtgcatgt atttgacttt
     8701 tataccaagc tctaaataat accttgtaag ttcttcagcg agttttttag ttagcacggt
     8761 tactaaaacc cgttcgtttc tttgtatgac ttttttagcc tcatcaaata aaatttcaac
     8821 ctgattatca ctatctttta attctattaa aggatcaagc agtcctgtag gacgcatgat
     8881 ttgatgaaag atgttttctt tgctaagttc aagttctaaa ggtgcaggtg tagctgaaac
     8941 aaaaagaaat tgacaatttt tatggataaa ttcatcaaac attaaaggac gattatccaa
     9001 ggctgaaggc aaacgaaaac cataatccac taaggtttgc tttctgcttc tatctcctgc
     9061 aaacatacct ctaaattgcg gtaaagatac atggctttca tcgactataa caagaaattt
     9121 tctatcttta atcgcaaaat aatcaaaaag cgtataagga gtatcacctt ctttaagccc
     9181 tgttaaatgc cttgcataat tttcaacgcc tttacacatt cctgtgcttg taagcatctc
     9241 aagatcaaat tcaacccttt gtttaaggcg ttgatattct acgagtttat tttcatgctc
     9301 aaaataagca aggcgttcgt taagttctgc ttttatgtct tttatcgctt gttttaatct
     9361 tgtttcgccc acgctaaact ggcttgtagg atagagtatg aagcgtttta aatctttacc
     9421 ttttttattt tctaaaacat tgtaatgata catagcatca agctcatcgc caaaaaattc
     9481 aagtcttact acttcatctt cataataagc tggataaatg tctataatat ctccttgaac
     9541 tctaaaatct gcacgatcaa aaaaattatc atttctttta taacccatat ctacaagttt
     9601 ttttaaaagt tctttttgtg aaatttgcat acctagttca aagattaaaa ccatgcctat
     9661 gtattcattt ggattaccaa gtccataatt tgctgaaaca ctagctatgc aaactacatc
     9721 ttcataactt aaaagagaag cagtagtact cagtcttaaa cgctctaagt cttcattggt
     9781 cgagctgtct ttttctatga aaacatcagt gcgtgggata taggcttcag gttgataata
     9841 atcataataa gatataaaat attctacatg atttttagaa aaaaagcctt taaattcact
     9901 ataaagttgt gcacaaaggc ttttgttgtg actcatgata agagtgggta tattaagttc
     9961 tttaatgaca tttgccatgg taaaggtttt tccacttcct gtaacgccta gtaaggtttg
    10021 atatttgttg ccttttttta tactttttac tatgcctttt atggcttctt gttgatcggg
    10081 actgggttta aattcgctgg taagttctaa catttttcta ctttattttt atttttgaaa
    10141 aaattttaaa agaaaatgct ttaattaaaa attaattgac aataaaaacc taaatttaaa
    10201 tttttttctg ctacaatatc aaataatatt ttccataaat tacaaatttc ttaagaaggc
    10261 aaaaatatgt ttgatgaaaa aataatcaat actatgacag ataaagtaaa tgaattaatt
    10321 gaaaagtata acgaagtttg cgaagccaat gaggctttaa gaaatgagct tgtaagcgtt
    10381 aaagcacaaa atgaagcgaa aagtaatcaa atcatgcgtt tagaagaaga acttaaatct
    10441 cgcaatatag aaagcgaaga tatttacaag aaaatagagg ctgttcttgg cagataatct
    10501 aaaacaagtc attgttaatg tcaatgcaaa agatttcatt gttaagtgca gtgaagaatt
    10561 tgcaaatttt ttagaagatg atatcgcttt gatttctggc ggtactaaaa aaatagaact
    10621 taaacgcttt gtagatgcgt ttgttaaaaa aagttatgaa aattatattt tagaaagaga
    10681 acttaagaaa ctaataaaag caatcaatga agaactcccg acaaaatgaa taaagctttt
    10741 actctgcttg agcttgtttt tgtgattttg attttgggaa ttttatcaag cttatcttta
    10801 tcttttatca atactacaaa agatgaggtt aaaattttaa aattaaaaat ggactatgaa
    10861 atgctaagct cagctcttgc tttaatgcgt agtcaaatga gacttaaaaa tttaaatttt
    10921 ccagaaattt tagataatgc gcaaaacaat caagccaaag aaaaactctt ttattgttta
    10981 aatgattgtg attattcttt gcttgataca cctatttatt ctgattttaa atcttggata
    11041 aaaataggta aaaatcacta tagatttgca ttaaacgcca aagagatggt tgaatttatt
    11101 tatgattcta aagaaggctt gttaaagtgt ataggaagtt ctagatgcaa agatctgata
    11161 taagatatta tgaacttgca atttgtggtt tgtatttgga taatttaact tttcatagtt
    11221 ttgatgaaat caaaccttta acacaagtat tagtggattt aaaaactaaa aaaaacctta
    11281 aagctatcgt gcttaaagaa tgtcaaaaac ctgattttaa aaccgtagaa attaaagaaa
    11341 ttacaaagta ttttttaact cctttgcaat ttgaattggc aaattttatt gtttattatt
    11401 atgcttcaaa acttggtttt gttttgggct tttttgaaac cagtcctaaa tatgaatgtc
    11461 aaaaaatgtt ttttaaagat acccctaagc taagcaatca acaacaaaat gccttaagtt
    11521 ttcttcaaaa agaaaataat tccttacttt ttgctgatac aggtagtggc aagactgaaa
    11581 tttatatttc tttgataaaa gagtgtttag aacagggtaa gcaagcttta cttttaatgc
    11641 cagaaatcgc acttactcca caaatgaaaa agcgtttaga agtgtatttt aaggataatt
    11701 ttttcctgtg gcattctaaa atttcaaaga aaaaaaagca agaatattta gagcgttttt
    11761 gcaagggaga agtactttta gtagcgggtg caagatcggc tttgtttttg ccttttagaa
    11821 atttaggact tattgtagta gatgaagaac atgataattc ttataaggct tctaatcagc
    11881 cttttatcaa tgcaagagat ttagcgcttt ttttgggtca aaaaaataat attaaagtgg
    11941 ttttaggttc tgcaacccca tctttgacga gtttttacaa acaaaaaagt tttagactaa
    12001 aaggaacttt ttttgagagc aaaaaacatt ttttatatga tgaaaatgag cttggtataa
    12061 cgcctatgct tttaagcgaa ttagaaaaaa gtttaaaaca tcaaaaacaa gctatagtgt
    12121 ttttacctac aagggctaat tttaggcaaa tcatttgcaa ggattgcgga gaaacgataa
    12181 aatgtccttt ttgttctatc gccatgagta tgcataaaaa gaaaaatgtt ttaaaatgtc
    12241 attattgtaa ttatacttct ttaatagagc aaaattgtcc aagttgcaaa ggagaaatgt
    12301 tagaagctag aaaaatgggg actgctgaac ttttagagct tttgcaaaat gctttgcctt
    12361 tagcaaaaat agcaaaattt gatagcgatg aaatcacaag cgttaaaaag cttaatacta
    12421 ttttaaaaga ctttaatgaa aataagatcg atatacttat tggcacctct atgcttgcta
    12481 aagggcatga ttatcatagc gtggatttga gtgtgatttt agggcttgat gagtatttgt
    12541 tgcgtcctag ttttagagcg agtgaagaaa ctttagcttt agctatgcaa gttgctggta
    12601 gggcagggcg taaaggcgaa gcaagagtgc ttttacaaac aaaaaataga gctttttttg
    12661 aaaggtatat agaggattat gatgcttttt taaaagatga gttagaaaat agaaaagatc
    12721 tttatcctcc atttaaacgc cttttaagag ttcttataga agataaagat caaaaaaatg
    12781 cacaaaaact ttgtgaaaaa cttgcctatc aatttaaaaa tatcaaacaa gtagaattag
    12841 taggctatgg aatttgtgga gttgaaatgc tgcatggaaa atatcgtttt tatttattac
    12901 ttagaagtga aaattataaa gctttagtgg caattgaaaa ttatattttg caatttaaaa
    12961 atgtaagtgc ggatattgat cctattgatt ttatatgaaa ttaattttta aatcactcat
    13021 aaaatcaatt tcacaccaat tgccatcaat ttccactgct tttgcgttgt tgtatttttc
    13081 aatcaaagcc tgcaaaaaac ttgtcatata catattttca aaatttttat tatcatataa
    13141 aatatctcgg tcaagcattt cataaaaagc aataacttca gaaagaaatt gataagaaaa
    13201 tttaaaaagt cctatatatt gagcttctat ctcatcatag gcattagctt tttttccaag
    13261 ttctataata taaccatttg tcatctttaa tgtttcagca tcttctaaag gatttgcaaa
    13321 gcgtttgttc caaagcttac gccaagactt atcaactact atagcaagtt cttctttggc
    13381 atttataagc ttttgcacgc aatcttgaaa ataaacaata tccgcataag aaataatcaa
    13441 atcttgtttt tcttcgatgc attttaatat aaaatcttta gcgcaaaaaa aagtatgaac
    13501 catattggtt ttatcatatt ttgaattaat aaaaaaatgc tcaatatcat atttattaag
    13561 ataatttttt agcacatcgt ttaaatatcc acccacaaca gctatttcat ttatacctgc
    13621 tgattttaaa gcttcgattt cataatctat tattttttta ttcttatact caaccataca
    13681 ctttggttga tcttttgtta aaggcatcag ccttgatcca aaacctgctg ctaagataat
    13741 tgcattcata ttattccttg attaaactaa accactcttt taaaatttga atattattaa
    13801 gcccattttc tctttcaata tgccacatta taccaaaaat attttcatac ttatgtttaa
    13861 aagcttctat ggtattatct tttgctaagc aaagttctac aagatcttcg cctaattttt
    13921 caatagcaaa attatgaaaa gaattactta taaatttttc ttttgagaaa aatacttcat
    13981 gtttgcctat atgattttca caaggactta tatggctgtt aaaataatga gctatcatct
    14041 gagctcctct gcaaattcct aaaagtggta ttttttcttt taaacaaatt tctataactt
    14101 gcttttcata taaatctctc tttttagata agacattagg actataaaaa cttaaatcat
    14161 taccaccgct taatatcaca gcttttatta gatgtttata atgagaaaaa tctatttcat
    14221 agctaagagg aagaggagta aaatttttaa ataaatcttt attaaataat tttccccaat
    14281 ccaaagccaa acattctctt tcttcatgat aactttcgtt gtaaataagc ctttgagtaa
    14341 tacctataaa caaaatattt gctcactttc acattctata tttatttttt tagcttttaa
    14401 atatttttca aaattttctt ctccaactcc tataacagca ggcattccaa gttctgaggc
    14461 acgaatggcc atatgtgaat tagcaccccc ataacatgta ataagtcctg ctatattttt
    14521 tgtaaataaa taatcatatc caggatctgc tgcataaatt aaaacaatct ttccttctaa
    14581 atctttatca ttttccttcg ccgtaaatgc agtaatgctc ttttgtgtaa taaaatttgg
    14641 aataatacta tgattataaa aagaaaaaat ttcatcggca ttgcaaagca aagaaggaag
    14701 ttttatagct tgtgtaagtt catattcttt tttattgcga ttaatttctt ctacaaactg
    14761 ctcttttgga tttatagaat aaagactaga ataaagattt aaaatgcttt ttatatcaag
    14821 atgagccaaa tcttcttttt caataccata atatttgcct aattcttcta tataaactat
    14881 agccttagaa agcaatctag tgaattcaaa tttaacgagc tctctaccct cgatagcctg
    14941 ctttaaaaaa tcaaaaaatt cacaagcatt aatctctagt ccatgttctc taagtaaagc
    15001 atttaaagct tttgtctttt cttctgaaaa aacaaaagct ttatcttgca aataaacttt
    15061 actatctttt tgatccacat caaaataaag ttcaaaatct tcatcatatc ttggagataa
    15121 aatattataa gttcctgctc ttaagtgtcc aaaatctttc aaaaattgat ctttgttgtg
    15181 aaaattaaga tggtttgttt gtttacttaa atttttactc actgtattga gtgaatttaa
    15241 aaaatcatct ttttcctctt tggttataaa atcaatctca actaaagaat ttaaaagttg
    15301 cattgctaca aatgcagccc tagccacccc cgcaaaaggc agagttccat aacgtttaca
    15361 ttcttcaata agccaataaa ttttatcaat taaagaaaaa ttagaattaa taatgccatc
    15421 atatctttct tttagcttat aagctttttg tatgtctttt aaataaagcc ctgatctagg
    15481 attaataatc ttgtttgtaa gttctaataa tgaaaattct aatcttttga tttcattttc
    15541 attaaaacca tgatttaaaa gttcttctaa ttttttagaa ctattaaagt cataacaaga
    15601 ataaacaata ttaaattcaa tcttatcgtg caattcatga tttttattaa gcttatctaa
    15661 gtaaaaattg acaagttttt gcgcgatatt ttcatctaat ttttttggta taaaagaatt
    15721 aaaagataat cttacatcca cataaggaat gcctaaaaaa gaatggatta aaggatggga
    15781 tcttaaatct ctataaccat aattatctct ttgatacgcc cagatattat ccgtaatgat
    15841 ttctttatat aaactaaaag ctaaacgctt aggtcttaac cctatgattt cagctggatt
    15901 ccaatcaggc attaccccaa aaatggcttt atctcccaaa actctagatc ttgattcttt
    15961 taaagactca aaacgtttat aaaatctata taaagcttct tttggtaaag agtgaaataa
    16021 attatttttt tcatgcataa ccaaaggacg cacttgcaag caaaaaagtt cttcctcatc
    16081 atcttgaata gcaaatgcaa attcaacatc taaaaaacaa cagttatata aaacttctaa
    16141 ttcttttata agttctataa ttttttgaag tctaatatct ttaaattcta aataatctct
    16201 gtaatgatag taagtttttg cactcttact acttccatct gtaatagagc tatttgaacc
    16261 attttcatca tattgaagac aaaaataagg ggaaaaatta tccttatcaa cactaaaacc
    16321 aacgccacaa agagtaatat tttcaagcat aggttgaact aaaatttcat cgctttttga
    16381 tggcatagaa ttggcaactt catataaagc ttttaataat tcatctttag aatcagcttt
    16441 aatatttgcc aaagaaagaa aagcacctgc attggagttt ttcatactat cttcatttaa
    16501 agaagaactt cttataatga gtctattagc ctttaaagtt tgaatgtcct gtaaaacttt
    16561 atcttcattt gatattaatt cttcaagcga agttaaaacc aaagatagaa cttttgcttt
    16621 ttttaatttt gtttgtaaat tttttaaatt ttgtgctttg gttttaaatt ttaactccgc
    16681 catatttttc cttagtttta tattttttta gcactccaac aacgagtggt atattttatg
    16741 ctaaattcct taggaagtct ttgagaaatt ttatcactaa ttttattaaa aagttcattt
    16801 ccttcatcag cctccaaatc ccagtaagga tttttaacgc ttttccatgc attaatataa
    16861 ttttcaatgc tttgatgaaa ataaaaatcc tcttcaatat aaacaatatt atcaaaaaga
    16921 tcctttcgac tctctataat tggtctttga tcttctcttc ttgttcccct tgtataattt
    16981 ggtacaaatt ctacaatagt atcttcagct attttttgta caggatcgtt taaatccctg
    17041 tgattccaca tacaagaaaa atatccctct gattttaata agcgatgcgc ttcctctaag
    17101 gcttcatttc tatccattac attaaaacta ctaccaaaag tcacccaatc aaattcacta
    17161 ttttgaagtg ttgagtttaa acctgttgcc ctaacccaat caaccttctc acctttagtt
    17221 ctttctatcc cgatctcacg catcgcatca tttggttcta cagatactac cttacatcct
    17281 ctttctaaaa gcataatgct taaatttcca gttcctgcac cgatatcagc gactttaata
    17341 tctttttttc caactaaact aataagcata tctatagttt ttggagcata atttggtcta
    17401 tagctataaa atttagcatg cttggtataa tcccacactt gttctactag tttttgcatt
    17461 ttatttcctt tttttcatct ttgacaagct tgatgaaaaa aaggaggtat tttatgcttt
    17521 tctagctgtc catgctctta ttttataagg aatctctata ctttgcatat gagaaatttt
    17581 agcttctatc atctctaaaa tttccttcca ccttttttca cctgcttgtg cttgtatatc
    17641 atttacagaa tgccaagctc caagataacg ttctttatcc caaaactctt tatagtcaca
    17701 ctccataaaa aagcagtctg tgaaatctcc tgttgaaaca agaatttctt cccatttttt
    17761 aacattttga gtgccactgc ttacacgagc aagctctgga acaatatgtt taatctcctt
    17821 ttcgatttca tcaaaaaccg aaccctctac aatgtggcga ggattccaaa tcgcagtgaa
    17881 ataccccccc cctgtcaata tacgattaaa ttctgggaga gattttttag gatctgtcca
    17941 atgaaaagaa ctagccatga tgacccaatc agcttgatta ttgctcatgc aggtttcttc
    18001 accacttcct ttgtgccaag aaatatttga taaattttgt gtaaattttt gcccttcttc
    18061 acgcatatta tcgtttggtt ccacagcgct aatttggcat ccaaacattt ctcccaacat
    18121 cttagtaagt tttccagtgc cagctcctac ttcaacaata tttaaatctt ttaaattttt
    18181 atttttatca ttgatacaag ctacaagttt ttcaagtaaa aacggactat aagcaggtct
    18241 attatgataa tgctttgcaa cctctgtaaa atccccttgt ttcatattga ttcctttctc
    18301 taaattaaaa tgcaattata tctttttttt attaatttac aaatctt
//
LOCUS       DAPWGO010000028        17297 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.029, whole genome shotgun sequence.
ACCESSION   DAPWGO010000028 DAPWGO010000000
VERSION     DAPWGO010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17297
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.029"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..1269)
                     /locus_tag="RJ336_000845"
     CDS             complement(<1..1269)
                     /locus_tag="RJ336_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C biogenesis protein"
                     /protein_id="HDZ5213302.1"
                     /translation="MKNIIKSIGDLRVSVVLFLLFALFCALATFIESAYGTPTAWAMV
                     YDTFWFEYIQLLLGINLLCGMFRYKMFGLKKLPLMIFHISFLFILVGSAMTRYAGFEG
                     ILPIREHTQNSLIESSKTSLRISAIKDGERYSAVNDRYIGNLPFANSFKLKLNLGDDQ
                     AVLKYKDLILNAHYTYKENNNSNPLLVLMLSQKGSQGVDVKFEKGEVKNIEGVNFAFM
                     NDNVKAPFVKIDENLTLSSSENLHFLSMLDGQNLDLKIGEKANAKERRLYEINDISFV
                     VKAASLHAQEALEGSNRPQDESFWLWFKSAWLEVGRTMLISTFGEPQNWKNSLLLHFK
                     DFALSNENKNLELTGSNALKLELSYKNESKEFYIFEYNKPIMIELAGQKFFISWALSY
                     EQLPFDIYLRDFVLDRYPGSMSPASYASEIT"
     gene            complement(1287..1982)
                     /locus_tag="RJ336_000846"
     CDS             complement(1287..1982)
                     /locus_tag="RJ336_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213303.1"
                     /translation="MLIVKDLHVYYGLIEAVKGIDFKVETGHIVSLIGSNGAGKTSTL
                     NALLNSVKRTGEVNFLGYDTKRHLTHTLVQKGIALVPEGRRVFINLSVEENLKIGAFN
                     NAENYEHLREQMYKLFPRLASKKHALAGTLSGGEAQMLAISRALMSEPKLLMLDEPSL
                     GLAPKIVGEVFDIIVRLKEEGITILLVEQNAYSALKISDYAYVLENGRIVMENEAKNL
                     IGDDEIRKKYLGL"
     gene            complement(1969..2739)
                     /locus_tag="RJ336_000847"
     CDS             complement(1969..2739)
                     /locus_tag="RJ336_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213304.1"
                     /translation="MILELKQISKSFGSVKAINETSFKINEGEIFALIGPNGAGKTTL
                     FNIITGNYKPSSGSVEFLGERIDHLKPHKIVHLGIARTFQNIRLFSSMNVLENVLIGF
                     NKQMKYNIFEAFLHLGRFGKIEQVFKEKAYAILEELGIAEFAYEKATSLSYGQQRKVE
                     IARAMATQPRLLLLDEPAAGMNSSESDELAELIFKLRKDYKISVLLIEHDMKFVNKLC
                     DRVLVLDYGKTIFEGKLCDAVNHKEVIAAYLGDFDANS"
     gene            complement(2736..3788)
                     /locus_tag="RJ336_000848"
     CDS             complement(2736..3788)
                     /locus_tag="RJ336_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HDZ5213305.1"
                     /translation="MMVRIKVSHLIFLIASIVFIFVSPYIFGDYGLNIVNQIAIFIIL
                     AVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAKNDQFFLDGPSSFILAIHSN
                     SFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGIIIKIAAINFPSITNGSR
                     GLVDIPQFSTIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIK
                     TLAFSTSAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAI
                     LVIGGSEWLRFLDELNIKIDSLNLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYEL
                     SDVIRGIKKRFKRSEK"
     gene            complement(3788..4684)
                     /locus_tag="RJ336_000849"
     CDS             complement(3788..4684)
                     /locus_tag="RJ336_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HDZ5213306.1"
                     /translation="MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDI
                     MMVGAYAALFCMTNLNVPFLGALSLAMIFAACVGIATDRIAYKPLRQAPRISLLITAI
                     GISFFLQNLFNMLFTSTPRTFTPPSYFEESVNFGGVITTYGSLMVPALTFVILIAVLW
                     ILYKSKYGIAIRALAFDIQTVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVE
                     PTMGTLIGLKAFAAAVLGGIGSVVGAVLGGLIIGFTEVVVVAFFPDLSGFKDAFAFIF
                     LVFILLFRPTGILGINFEKSRF"
     gene            complement(4703..5812)
                     /locus_tag="RJ336_000850"
     CDS             complement(4703..5812)
                     /locus_tag="RJ336_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDZ5213307.1"
                     /translation="MKKSLILASILSLSLSAAEVKIGVVLPLSGATAAYGQSALEGIK
                     LANSMQSTLSNGDKVSLAIIDTKGDKLESSSGANRLVSQDKVIGLIGEMVTANTLQVM
                     RVAEDNKIPLIAPAATGDRLLDKKIYSSRVCFMDSFQGSSLAKYVFSKLNYKSAVIVV
                     DQSTDYSLGLAKAFEKQYKSNGGQILRILRVNSGDKDFRAIVAQVKSLNPEFIFLPLY
                     YSEASLFARQSKLAGLNIPMGSADGVADQTFISLAGDASEGYIFTDSFDANNPTTKLS
                     KEFISVYEKAKGTKEVPNFSAMGADAYFVMLNAMNACVENLTSKCVNEKIHQTKNYQG
                     VSGVISIDQTGNATRSVVVKEIKNQKQNYKDIINP"
     gene            complement(5834..6949)
                     /locus_tag="RJ336_000851"
     CDS             complement(5834..6949)
                     /locus_tag="RJ336_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDZ5213308.1"
                     /translation="MKKLTLTLSVLTMVNCLYAKDINIGVVLPLTGTVAAYGQDVFNG
                     IELANKLQPKLSNGDVIKLITIDTKGDKLETSNGVNRLIATDKVLGIIGEATTPNTIQ
                     AISIAEEKKIPLIAPVASGDKLLDKKKYASRVCFKDNFQGDKFATYVSKDLGLKNAVI
                     IIDQSNVYSLGLARAFENSFKNNGGKIIKKLVINSGDKDFRAVVSQLKSLNPDFVYMP
                     IYHPEAALIARQARQIGFDKLLAAGDGVNNQTFIDLGGSAVNGVIFTDSFDYNNPSTQ
                     LGKDFVAAYEKVKGTKELPAFSAMGADAYFVMLNAMNACVDNLSSECINSKIHQTKDF
                     QAVGGVISIDESGNAIRSVVIKEIQNQKQNYKTIINP"
     gene            complement(6980..7414)
                     /locus_tag="RJ336_000852"
     CDS             complement(6980..7414)
                     /locus_tag="RJ336_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDZ5213309.1"
                     /translation="MIIRWLFISSIFVVALFGINLKSFFTYTFDANKQYDMEKAKALY
                     FQNKCNTCHGDNAEKSVIGSRILKDMSPEDIKGALIGYTLDSSSSTTASQMAFYARNL
                     SHEDIDNIIAYIKGGNFALDLQVKDLLEEEPAQKTKHNIFLK"
     gene            complement(7423..7614)
                     /locus_tag="RJ336_000853"
     CDS             complement(7423..7614)
                     /locus_tag="RJ336_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mini-MOMP protein"
                     /protein_id="HDZ5213310.1"
                     /translation="MKKIFLIGMILNHFVFAAPLDEVFKDIEVSGTVRYRYDIKKEKK
                     YNKKTHRYQNKTQTEITIK"
     gene            complement(7666..8172)
                     /locus_tag="RJ336_000854"
     CDS             complement(7666..8172)
                     /locus_tag="RJ336_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhA family protein"
                     /protein_id="HDZ5213311.1"
                     /translation="MLEKIFESLLVRSRIVTILPVIFGLIGAFVLFFIASYDVLKVIF
                     YTYNYFFDAGSNVDLHEDVVALIIGAVDLYLMALVLFIFSFGVYELFISEIEEFKQTK
                     QSKVLEVHSLDQLKDKLAKVIIMVLVVNFFQRVLQMKFATPVDMAFLAGSILALCVGL
                     YFLHKGGH"
     gene            complement(8181..9212)
                     /locus_tag="RJ336_000855"
     CDS             complement(8181..9212)
                     /locus_tag="RJ336_000855"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDZ5213312.1"
                     /translation="MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSVG
                     SEVEFKGKAYKVKELTENVFKENPIDIAFFSAGGSVSEKYAKFAVESGAVVIDNTSHF
                     RMEKDVPLVVPECNPEDIKDWKKTGIIANPNCSTIQMVQVLKPLNDAFNLKRVDVSTY
                     QAASGAGKEGMQELVEAMQSFFAFKLDEFEPQTFPYTLALNLIPQIDVFMDNDYTKEE
                     LKMVNETQKILHKNLEVSATCVRVPVLRSHSEAITMHFEKEIDVKKAKEILEKAPSVV
                     VIDDPKNKKYPMPLMTSDTNETYVGRIRADVYDKKILHLWCVADQIRVGAATNAVRIA
                     QKWLELKNK"
     gene            complement(9212..10513)
                     /gene="flgR"
                     /locus_tag="RJ336_000856"
     CDS             complement(9212..10513)
                     /gene="flgR"
                     /locus_tag="RJ336_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system response
                     regulator"
                     /protein_id="HDZ5213313.1"
                     /translation="MNLVIVEDDINMRKSLEIALAEYEEFNIKSYKSATEALKKIDEN
                     TDLIITDINMPGIDGIEFVKACENKYDFIIMTGNATLSRAIEAVRLGVKDFLTKPFDV
                     DTLVEAIKRAKIIREKTADKKSKKNEKKEENKDFFSTSPNLEKTLNLSQKAAKTDASI
                     MFFGESGVGKEVFSRYIHTHSKRSNKPFVAINMAAIPANLIESELFGFEKGAFTDANA
                     TKIGLFEMANEGTLFLDEIGEMPYEIQAKLLRALQEKEITRLGSTKSIKIDVRIISAT
                     NANLDEKIKNGEFRSDLYYRLNTVPINIPPLRERKEEILGIAQKVLEDTCKEYDFKEK
                     QLSQEAKNALLEYDFPGNIRELISVVQRACILSENDEISSEDLFLEARSIKKDVKNLE
                     KELICEVLLSVDYDKDQASQILGMDIKILNEKIKKYQIKDR"
     gene            complement(10570..11019)
                     /gene="flgQ"
                     /locus_tag="RJ336_000857"
     CDS             complement(10570..11019)
                     /gene="flgQ"
                     /locus_tag="RJ336_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FlgQ"
                     /protein_id="HDZ5213314.1"
                     /translation="MERIVCLLIFLSFKLFAQDEFIFWAELSSKNFILFHQNQNLSLA
                     MTQSENVEEQWVCEISYSDQDIKVLPRTSLGLIDDNMPKTIKFNFLNSHKDELSDCFI
                     GAKISVKDIVNTDLLRAQSETYIKILPLRFTVEFGEQNAIIYYLKKK"
     gene            complement(10995..11510)
                     /gene="flgP"
                     /locus_tag="RJ336_000858"
     CDS             complement(10995..11510)
                     /gene="flgP"
                     /locus_tag="RJ336_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly lipoprotein FlgP"
                     /protein_id="HDZ5213315.1"
                     /translation="MKKIYFMLAIAGIFAGCVPSANSATKNSSANSTPPSQDVIVQKV
                     DKDDVRDIIREEKMLAPDASETELSFTAVGEGIAPMNTVSTAQALALAKRAAITDAYR
                     QLASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDENFNQGLYRVNLELKI
                     DADKWKELFAY"
     gene            complement(11574..14165)
                     /gene="gyrA"
                     /locus_tag="RJ336_000859"
     CDS             complement(11574..14165)
                     /gene="gyrA"
                     /locus_tag="RJ336_000859"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HDZ5213316.1"
                     /translation="MENIFSKDSDIELVDIENSIKSSYLDYSMSVIIGRALPDARDGL
                     KPVHRRILYAMQNDEAKSRTDFVKSARIVGAVIGRYHPHGDTAVYDALVRMAQDFSMR
                     YPSITGQGNFGSIDGDSAAAMRYTEAKMSKLSHELLKDIDKDTVDFVPNYDGSESEPD
                     VLPSRVPNLLLNGSSGIAVGMATNIPPHSLNELIDGLLYLLDNKDASLEEIMQFIKGP
                     DFPTGGIIYGKKGIIEAYRTGRGRVKVRAKTHIEKKTNKDVIVIDELPYQTNKARLIE
                     QIAELVKEKQIEGISEVRDESNKEGIRVVIELKREAMSEIVLNNLFKSTTMESTFGVI
                     MLAIHNKEPKIFSLLELLNLFLTHRKTVIIRRTIFELQKARARAHILEGLKIALDNID
                     EVIALIKNSSDNNTARDSLVAKFGLSELQANAILDMKLGRLTGLEREKIENELAELMK
                     EIARLEEILKSETLLENLIRDELKEIRSKFDVPRITQIEDDYDDIDIEDLIPNENMVV
                     TITHRGYIKRVPSKQYEKQKRGGKGKLAVTTYDDDFIESFFTANTHDTLMFVTDRGQL
                     YWLKVYKIPEGSRTAKGKAVVNLINLQAEEKIMAIIPTTDFDESKSLCFFTKNGIVKR
                     TNLSEYQNIRSVGVRAINLDENDELVTAIIVQRDEDEIFASGGEENLENQEIENLDDE
                     NLENEESVSTQGKMLFAVTKKGMCIKFPLAKVREIGRVSRGVTAIKFKEKNDELVGAV
                     VIENDEQEILSISAKGIGKRTNAGEYRLQSRGGKGVICMKLTEKTKDLISVVIVDETM
                     DLMALTSSGKMIRVDMQSIRKAGRNTSGVIVVNVENDEVVSIAKCPKEENDEDELSDE
                     NFGLDLQ"
     gene            complement(14206..14781)
                     /locus_tag="RJ336_000860"
     CDS             complement(14206..14781)
                     /locus_tag="RJ336_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HDZ5213317.1"
                     /translation="MRCINCGAFALLCFCDLCELELSEFSLNVRKLDNNFKVYSFYKY
                     HEIQHLLHSKHYFYGYFVYKMLAKLSFAKFKDFFDPRMTINVIALDDKVEDMLYSHSA
                     ILARYLKTKFVKPVFNVLKAQNHIKYSGKSLEFRQKHKRNYKLLKTIQEPVILVDDIV
                     TTGSSLLEAKKVLEENKISVLFALVLADAKV"
     gene            complement(14778..15422)
                     /locus_tag="RJ336_000861"
     CDS             complement(14778..15422)
                     /locus_tag="RJ336_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213318.1"
                     /translation="MFKKFLIFIVPILFLSACATKQDTFAQVNQISKNSQCSSCESPD
                     GFEAKIKGLLYISDVGIQCCANKRTLDTGIALKKVYLHRFYDLKEGQKVLNAKGKKLF
                     VDVNFNAVFYTYLKQELEARGIVVLDNNDQNSPYVSKIDLEFISYGATQDATGLHSKL
                     VGVLQVSDINKNKKFTIRTKQDVQGFDDLKETTFYTHLLIKQMANKAASLISEL"
     gene            complement(15499..17295)
                     /gene="lepA"
                     /locus_tag="RJ336_000862"
     CDS             complement(15499..17295)
                     /gene="lepA"
                     /locus_tag="RJ336_000862"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDZ5213319.1"
                     /translation="MSVKNIRNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMD
                     TMDIEKERGITIKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLV
                     VDASQGVEAQTIANVYIALENNLEIIPVINKIDLPNADVEKVKHEIEHIIGIDCKDAI
                     CVSAKTGVGIKELIETIITKIPAPKTDDEAPTKALIYDSWFDNYLGALALVRIYEGNI
                     AKNDEVLVMSTDKKHIVQDLFYPHPLSPIKTQSLQSGEVGVVVLGLKTVGDVQVGDTI
                     TLVKNKAKEAIGGFEKAKAFVFAGLYPIETDKFEDLRDALDKLKLNDSSITYEPETSL
                     ALGFGFRVGFLGLLHMEVIKERLEREFNLDLIATAPTVTYEIYQTDGELVKIQNPSEL
                     PPVNKIDHIKEPYVKATIITPSEFLGNLITLLNRKRGVQVKMDYITPERVLLEYDVPL
                     NEIVMDFYDKLKSLTKGYASFDYEPIEFRVGDLVKLDIKVAGENVDALSIIVPNEKAQ
                     SKGRELVSAMKEIVPRQLFEVAIQASIGNKIIARETVKSMGKNVTAKCYGGDITRKRK
                     LLEKQKEGKKRMKAIGKVNLPQEAFLSVLKID"
BASE COUNT         5894 a         3349 c         2063 g         5991 t
ORIGIN      
        1 ggtaatttca cttgcataag aagctggaga catagaacct ggataacgat ctaatacaaa
       61 atctctcaaa taaatatcaa aaggcaattg ttcataagaa agcgcccaag aaataaagaa
      121 tttttgaccc gcaagttcta tcataatagg tttattatat tcaaaaatat aaaattcttt
      181 actttcattt ttatagctta attctaattt taaagcatta gagccagtta attctaagtt
      241 tttattctca ttgcttaagg caaaatcttt aaaatgcaat aataaagaat ttttccaatt
      301 ttgaggctcg ccaaaagtag aaatcaacat agttctaccc acttctaacc aagcagattt
      361 aaaccataac caaaaacttt catcttgagg tctattggaa ccttctaaag cttcttgcgc
      421 atgcaaagaa gcagctttaa ctacaaaact aatatcatta atttcataaa gccttctttc
      481 cttagcattt gccttttctc caattttaag gtctaaattt tgtccatcta gcatacttag
      541 aaaatgtaag ttttcacttg aacttaaagt taaattttcg tcaattttta caaaaggtgc
      601 tttaacatta tcattcataa aagcaaagtt aaccccttct atattcttaa cttcaccttt
      661 ttcaaattta acatcaacac cttgagatcc tttttgagaa agcattaaaa ccaataaagg
      721 attagaatta ttattttctt tataagtata atgagcattt aagattaaat ctttatattt
      781 taatacagct tgatcatcac ctaaattaag ttttagttta aaagaattag caaaaggcaa
      841 atttcctata taacgatcat taaccgcact atagcgttct ccatctttta tagcagaaat
      901 gcgcaaagaa gtcttagaac tttctataag tgaattttga gtatgctctc taataggtaa
      961 aataccttca aaaccagcat atcttgtcat tgcagaaccc actaaaataa ataaaaaaga
     1021 aatatgaaaa atcattaaag gcaatttttt aagcccaaac attttataac gaaacatccc
     1081 gcatagtaaa ttaataccaa gtaaaagttg tatatattca aaccaaaaag tatcataaac
     1141 cattgcccaa gccgtaggag ttccataagc actttcaata aaagttgcca aagcacaaaa
     1201 aagcgcaaaa agcaaaaaca atacaaccga aactcttaaa tcccctatgc tttttattat
     1261 atttttcatt ctttttcctt taaattttaa agccctaaat atttctttct aatctcatca
     1321 tcacctatta aatttttagc ctcgttttcc attacaatgc gaccattttc caaaacataa
     1381 gcataatcac ttatttttaa tgcagaataa gcattttgct ctaccaaaag aatagttata
     1441 ccctcttctt ttaaacgcac aataatatca aaaacttcac ccacaatctt tggagcaagc
     1501 cccaaagaag gctcatccaa catcaaaagt tttggctcac tcattaaagc ccttgaaatc
     1561 gcaagcattt gcgcttcccc tccactcaat gttccagcta aagcatgctt tttacttgca
     1621 agtcttggaa aaagtttata catttgctct cttaaatgct cataattttc agcattatta
     1681 aaagcaccta tttttaaatt ttcctctacg cttaaattaa taaaaacacg tcttccttca
     1741 ggaactaaag ctataccttt ttgaactaaa gtatgagtta aatgtctttt agtatcataa
     1801 cctaagaaat taacctcacc agttctttta actgagttta aaagcgcatt taaagttgaa
     1861 gttttacctg ctccatttga acctataaga gaaacaatat gacctgtttc cactttaaaa
     1921 tcaatccctt taacagcttc aattaatcca taataaacat gcaaatcttt aactattagc
     1981 atcaaaatcc cctaaatacg cagcaattac ttctttatga tttacagcat cgcaaagttt
     2041 accttcaaaa attgtttttc cataatcaag taccaatacg cgatcacaca atttatttac
     2101 aaatttcata tcatgttcta taagcaaaac gctaatttta taatcttttc gtaatttaaa
     2161 aatgagctca gcaagttcat cgctctcaga gctattcatc ccagcggctg gctcatcaag
     2221 caataataat cttggctgag tagccattgc tcttgcaatc tcaacttttc tttgttgtcc
     2281 ataacttaag ctagtagcct tttcataggc aaattctgca ataccaagtt cttctaatat
     2341 tgcataagcc ttctctttaa atacttgttc tatttttcca aaacgcccta aatgcaaaaa
     2401 ggcttcaaaa atattatatt tcatttgttt attaaaacca ataagaacat tttcaagcac
     2461 attcatgctt gaaaaaagcc taatattttg aaatgttcta gctattccta aatgcacaat
     2521 cttatgaggt tttaagtggt caattctttc tcctagaaat tcaaccgaac ctgaactagg
     2581 tttatagtta cctgttataa tattaaaaag agttgttttg ccagccccat taggtccaat
     2641 taaagcaaaa atttcaccct cattgatttt aaaagaagtt tcattaatag ctttaacact
     2701 accaaaactt tttgaaattt gttttaattc caaaatcatt tttcactcct tttaaaacgc
     2761 tttttaatcc ctctaatcac atcactcaac tcataataac ccattatgcc ttttcttgca
     2821 aaaagcatta ctaaaatcag aacaatagaa aaaacaacca ttctaagccc tggcgttgat
     2881 tggatatcaa gatttaaaga atctattttt atatttaact catctaaaaa tctaagccac
     2941 tcacttccac caataactaa tatcgcacct ataatagcac ctgtagtaga accaagtccg
     3001 cctaaaacaa taataatcaa aagctgaaaa gtaagtaaaa aatcaaattg agttggagat
     3061 acggtagtca acagacaagc caaaagtccc ccacctacac cttctaaaaa tgctgaagtg
     3121 ctaaaagcta aagtttttat ccaaaaagta tttattccca tagcacttgc agcatcttca
     3181 tcatctctta tagccttcat tgcacgacca tatttagaat aaactatatt taaaattaaa
     3241 ataaccgcta caatagcaat accacctgtc caataaatcg tggaaaattg tggaatatct
     3301 accagtcctc ttgagccatt agtaatagaa ggaaaattaa tagcagctat tttaataatt
     3361 attccaaagc ctaaagttac aatagccaaa taatcccctc tcacgcgaaa tacagcaaaa
     3421 gccaaaatca gggcaagtaa agatgaacaa attccagcta caattaaagc tagaataaag
     3481 gaatttgaat ggatggctaa aataaaagaa ctaggaccat ctaaaaaaaa ctgatcattt
     3541 ttcgcatcag cacttaaaag aactaaagca gccgcataag ctccaattgc aacaaatcca
     3601 ttgggttcta gtgaaaattg tccagttaca ccattaataa ggttgtaact cacagccaaa
     3661 ataataaaaa tagcaatttg attaacaatg tttaatccat agtccccaaa aatataagga
     3721 gaaacgaaaa taaaaacaat tgaagcaatt aaaaagatta aatgtgaaac cttaattcta
     3781 accatcatca aaacctactc ttttcaaaat ttatacctaa aattcccgta ggtctaaata
     3841 acaatataaa caccaaaaaa ataaaagcaa atgcatcttt aaagcctgat aaatctggaa
     3901 aaaaagccac aacaacaact tcagtaaatc ctataataag tccacccaaa actgcaccta
     3961 ctacagaacc tatacctcct aaaactgcag cagcaaaagc tttcaaacct attaaagttc
     4021 ccatagtagg ttcaacagag taataatttg cagcccaaaa aacaccccca actgctgcca
     4081 aagctgaacc tagggcaaaa actatagcaa taatacgatt tgcatctata cccattaaat
     4141 ttactgtttg tatatcaaat gccaaagcac gaatagctat accatacttg cttttataca
     4201 aaatccataa cactgctatt aaaataacaa atgtaagagc aggaaccatt aaagaaccat
     4261 aagttgttat cactccgcca aaattaacac tttcctcaaa ataacttggc ggtgtaaaag
     4321 ttctaggtgt tgaagtaaaa agcatattaa aaagattttg caagaaaaaa ctaataccaa
     4381 ttgctgtaat caacaatgaa attctaggag cctgtcttaa aggtttataa gcgattctat
     4441 ctgtagctat tccaacacag gcagcaaaaa tcattgccaa agacaaagct cctagaaaag
     4501 gaacatttag attagtcatg caaaaaagag ctgcataagc accaaccatc ataatatcgc
     4561 cgtgagcaaa attaataagt cttaacacgc cataaaccat agtatagcca acagcaataa
     4621 gggcatacat actgcccaaa ctaagtccat taacaagttg ttgtaaaaat aaagtagaat
     4681 ccataatctt tctatttttc ctttaaggat tgataatatc tttataattt tgcttttgat
     4741 ttttaatttc tttaaccact acagaacgag ttgcatttcc tgtttgatca atactgataa
     4801 caccagaaac accttgataa tttttagttt ggtgaatttt ttcattgaca cacttactag
     4861 taagattttc aacgcaagca ttcatagcat ttaacattac aaaatacgca tcagccccca
     4921 tagctgaaaa atttggaact tcttttgttc ctttagcttt ttcataaaca ctgataaatt
     4981 ctttgcttaa ttttgtagtt ggattattag catcaaaact atctgtgaaa atataaccct
     5041 cgcttgcatc tccagctaaa ctaataaaag tttgatcagc aactccatct gcagaaccca
     5101 taggaatatt taaacctgcg agttttgatt gtcttgcaaa taaagaagct tcactataat
     5161 aaagcggtaa aaaaataaat tctggattta aacttttaac ttgagctaca atagctctaa
     5221 aatctttatc acctgaatta actcttaaaa ttctaagaat ttgaccgcca ttagacttgt
     5281 actgtttttc aaaagctttt gctaaaccta aggaatagtc agtgctttga tctactacaa
     5341 taacagcact tttgtaatta agttttgaaa aaacatattt tgctaaagat gaaccttgaa
     5401 aactgtccat aaaacatact cgagaagaat atattttttt atcaagcaat ctatcaccag
     5461 ttgcagcagg agcgatcaat ggaattttat tatcttctgc tacgcgcata acttgcaatg
     5521 tattagcagt aaccatttcc cctataagac ctataacttt atcttgagaa actaaacgat
     5581 ttgctccact cgaagattct aatttatcac ctttagtatc aataatagca agagaaacct
     5641 tatctccatt acttaaagtt gattgcattg aatttgcaag tttaatccct tctagtgcac
     5701 tttgtccata tgctgcagta gctccgctaa gtggtaaaac aactcctatt ttgacttccg
     5761 cagcacttaa acttaaactt agaatacttg ctaaaattaa actttttttc attctctacc
     5821 tttattttag taattatgga tttataattg ttttataatt ttgtttttga ttttgaattt
     5881 ctttaatcac aacagaacga atggcattac cgctttcatc tatgctaatc acaccaccaa
     5941 cagcttgaaa atctttagtt tgatgaattt tactattaat acattcgctg ctaagattat
     6001 caacgcaagc attcatagca ttcaacatta caaaatacgc atcagccccc atagccgaaa
     6061 atgctggaag ttcttttgtt cctttaactt tctcataagc tgcaacaaaa tcttttccta
     6121 attgtgtaga tggattgtta taatcaaaac tatcagtgaa aattactcca ttgacagcac
     6181 ttccgccaag atctataaaa gtttgattat taacaccatc tcctgctgct aaaagtttat
     6241 caaaaccaat ttgtcttgct tgtctcgcaa ttaaagcagc ttcaggatga taaataggca
     6301 tataaacaaa atcaggattt aaactcttaa gttgcgaaac cacagctcta aaatctttat
     6361 ctcctgaatt aataacaagt ttttttataa ttttcccacc attattctta aaagaatttt
     6421 caaaagctct tgccaaacct aaagaataaa cattgctttg atctatgatg ataacagcat
     6481 ttttaagtcc taaatcctta gatacataag tggcaaattt atctccttga aaattgtctt
     6541 taaaacaaac tctacttgca tatttctttt tatctagcaa tttatctcca gatgccactg
     6601 gagctattag aggaattttt ttctcttctg ctatagaaat agcttgaatg gtatttggag
     6661 ttgtagcttc tccaataatc ccaaggactt tatctgttgc tattaaacga ttaactccgt
     6721 ttgaagtttc aagcttatct ccttttgtat ctattgtgat aagtttaata acatctccat
     6781 ttgaaagttt tggctgtagc ttattagcca gttcaattcc gttaaaaaca tcttgcccat
     6841 aagctgccac agttccagtt aaaggtaaaa ctactcctat attaatatcc ttagcatata
     6901 agcaatttac catagttaaa acacttaaag ttaaagttag ttttttcata gcattccttt
     6961 taattatagt ttttacattt tattttagaa atatattatg ttttgttttt tgcgcaggtt
     7021 cttcttcaag aagatctttt acttgcaaat caagcgcaaa atttccacct ttaatataag
     7081 caataatatt atctatatcc tcgtggctta aatttctagc ataaaaagcc atttgagaag
     7141 ctgttgtaga actactacta tcaagagtat aacctatcaa agctccttta atatcctcag
     7201 gagacatatc ttttaaaatt ctagatccta taacactctt ttcagcatta tctccatggc
     7261 aagtattgca tttattttga aaatacaaag ccttcgcttt ttccatatca tattgcttat
     7321 ttgcatcaaa ggtataagta aaaaatgatt tcaaattaat accaaaaagc gcaacaacaa
     7381 atattgaact aataaacaac catcgtataa tcatgatttt ccttatttta ttgtaatttc
     7441 cgtttgtgtt ttattttgat atctatgtgt ttttttgttg tatttttttt cttttttaat
     7501 atcatagcga taacgaacag tccctgaaac ttctatatct ttaaagactt catctaaagg
     7561 agctgcaaaa acaaaatgat ttaaaatcat accaattaaa aatatttttt tcatttttat
     7621 tctttaaaca caaaaaacga ttatatcaaa aaaagataat ccttgttaat gaccaccttt
     7681 atgtaaaaaa taaagtccta cacaaagagc taaaatcgat ccagcaagaa aagccatatc
     7741 cacaggagta gcaaatttca tctgcaaaac cctttgaaag aaatttacca ctaagaccat
     7801 aatgataact tttgcaagct tgtcttttaa ttgatctaag ctatgcacct ctaaaacctt
     7861 gctttgtttt gtttgtttaa attcttctat ttcgctgata aaaagctcat aaactccaaa
     7921 agaaaaaata aacaaaacta aagccataag ataaagatca acagctccta taattaaagc
     7981 caccacatcc tcatgcaaat ccacattaga acctgcatca aaaaaataat tataagtata
     8041 aaatataact tttaaaacat cataacttgc aataaaaaac aatacaaaag ctccaattaa
     8101 accaaaaatt acgggtaaaa ttgtaacaat acgacttcta acaagtaaag attcaaatat
     8161 tttctctaac atttttttcc ttatttattt tttaattcta accatttttg cgcaatacgc
     8221 acagcatttg ttgcagcacc tacacgaatt tgatctgcca cacaccaaag atggagtatt
     8281 tttttatcat acacatcagc acgaattctt cctacataag tttcattagt atcgctagtc
     8341 attaaaggca tagggtattt tttattttta ggatcatcta tgacaacaac acttggtgct
     8401 ttttctaaaa tttctttagc tttttttaca tctatttctt tttcaaaatg catagtaatg
     8461 gcttcgctat gacttcttaa aacaggcact cttacacaag ttgctgaaac ttctaaattt
     8521 ttatgtaaaa ttttttgagt ttcattgacc attttaagtt cttctttagt gtaatcatta
     8581 tccataaaaa catcaatttg tggaataaga ttaagtgcta aagtataagg aaaagtttga
     8641 ggttcaaatt catcaagttt aaaagcaaaa aaactttgca tggcttcaac caattcttgc
     8701 attccttctt ttcctgctcc acttgcagcc tgataggtac ttacatcaac acgctttaaa
     8761 ttaaatgcat catttaaagg ttttaaaact tgtaccattt gtatagtaga acaatttgga
     8821 tttgcaataa tccctgtttt tttccaatct ttaatatcct caggattgca ttcaggaacc
     8881 accaaaggaa catctttttc cattctaaaa tgacttgtat tatcaattac aactgcaccc
     8941 gattctactg caaatttagc atatttttca ctcacacttc cacctgcgct aaaaaaagca
     9001 atatcaatag gattttcttt aaatacattt tcagtaagtt ctttgacttt ataagctttg
     9061 cctttaaatt ctacttcact acctacactt tttgcacttg ctaaaggtaa aatactttcc
     9121 actggaaaat caagttcatc taaaacattt aaaagctctt ccccaaccgc accagtagca
     9181 cccacaatgg ctattttttg tttttttgac attacctatc ctttatttga tattttttaa
     9241 ttttttcatt taaaattttt atatccatac ctaaaatttg agaagcttga tccttgtcat
     9301 aatctacact taaaagaact tcacaaatca attctttctc taaattcttt acatcttttt
     9361 ttatacttct agcttctaag aacaaatctt cacttgaaat ttcatcattt tcacttaaaa
     9421 tacaagctct ttgtacaacg gatattaatt ctctaatatt accaggaaaa tcatattcaa
     9481 gtaaagcatt tttagcttct tggctgagct gtttttcctt aaaatcatat tctttacaag
     9541 tatcttctaa aaccttttga gctataccta aaatttcttc tttgcgctct cttaaaggcg
     9601 ggatattaat aggaacagtg tttaaacgat aatataaatc tgaacgaaat tcgccatttt
     9661 ttattttttc atctaaattt gcattagttg cactgataat tcttacatct attttgatgc
     9721 ttttcgtact tccaagtcgc gtaatttctt tttcttgcaa agctcttaaa agtttggctt
     9781 gaatttcata aggcatttcg ccaatttcat ctaaaaacaa agtaccctca ttagccattt
     9841 caaaaagccc tattttagtt gcattagcat cggtaaaagc acctttttca aaaccaaaaa
     9901 gctcactttc aatcaaattt gcaggaatag ctgccatatt aatagcaaca aaaggcttat
     9961 tagagcgttt agaatgggtg tgaatataac gagaaaatac ctcttttcct actccacttt
    10021 ctccaaaaaa cattatagag gcatcagttt tagccgcttt ttgacttaaa tttaatgttt
    10081 tttctaaatt aggagaagtt gaaaaaaaat ctttattttc ttcttttttt tcattttttt
    10141 tgcttttttt atcggctgtt ttttctctta tgattttagc acgcttaata gcctcgacta
    10201 aagtatcaac atcaaaaggc ttggttaaaa aatcttttac tcccaaacga accgcttcta
    10261 tagcacgact taaagtagca tttcctgtca taataataaa atcatattta ttttcacagg
    10321 ctttaacaaa ttctatgcca tcaattcctg gcatattaat atctgtaata atcaaatctg
    10381 tattctcatc tatttttttt aaagcttcag tagcagattt ataagattta atattaaatt
    10441 cttcatactc tgctaatgca atttctaagg atttgcgcat attaatatca tcttctacta
    10501 tgactaaatt catcctaagc cttttaaaaa atttctgcta tagtatccaa tttgcgctta
    10561 attttgaatt tacttttttt taagataata aattatcgca ttttgttcgc caaattccac
    10621 ggtaaaacgc aagggtaaaa ttttaatata agtttcactt tgagcacgta ataagtcagt
    10681 attaacaata tccttaacac tgattttagc tcctataaag caatcgctta actcatcttt
    10741 atgagaattt aaaaaattaa atttaattgt ttttggcata ttatcatcaa ttaatcctaa
    10801 agaagttcga ggtaaaactt ttatatcttg atcactataa gaaatttcac atacccattg
    10861 ttcttcaaca ttttcacttt gcgtcattgc taaggataaa ttttgatttt gatgaaagag
    10921 aatgaaattt ttactagaaa gctctgccca aaaaataaat tcatcttggg caaaaagctt
    10981 aaagctaaga aagattaata agcaaacaat tctttccact tgtctgcatc gattttaagt
    11041 tctaagttta ctctataaag cccttgatta aaattctcat caataatact tgcatttttt
    11101 atcaaaccat ttacttgcgc agtaatagtt gaacttctaa gcattgcatc ttttacagta
    11161 tctttaccat ttactttcac accataaagc ttacttgcaa gttgtctgta agcatctgta
    11221 atcgctgctc tttttgctaa agctagggct tgagcagtag atactgtatt cattggagca
    11281 attccttcac caactgctgt aaaactaagt tccgtttcgc tagcatctgg agccaacatc
    11341 ttttcttctc tgataatatc acgcacatca tctttatcga ctttttgcac gataacatct
    11401 tgagatggag gagtgctatt tgcacttgaa tttttagttg cactgtttgc acttggtaca
    11461 caaccagcga aaattcctgc tattgctagc ataaaataaa tttttttcat ttttacacct
    11521 tcaaaatatt gtaattagta aaataaaaag caataagcgt tccaacttta aacttattgc
    11581 aaatctaaac caaagttttc atcgcttaac tcatcctcgt cattttcctc tttaggacac
    11641 ttagcgatgc taaccacctc gtcattttcc acattaacta caatgacgcc acttgtatta
    11701 cgccctgctt ttctaatgct ttgcatatca acacgtatca tcttgcctga acttgtaaga
    11761 gccatcaaat ccatagtttc atctactata actacgctaa taagatcttt ggttttttct
    11821 gtaagtttca tacaaattac acccttacca cctctgcttt gcaatctata ttctccagca
    11881 ttggtgcgtt ttcctatacc ttttgcactt atgcttaaaa tttcttgctc atcattttct
    11941 ataacaactg cacctactaa ttcgtcattt ttctctttaa acttaatagc cgtcacccca
    12001 cgacttacac gaccgatttc acgtacttta gcaagtggga atttgataca catacctttt
    12061 ttggttactg caaagagcat tttaccttgt gtgcttacac tttcttcatt ttcaagattt
    12121 tcatcatcta aattttcaat ttcttgattt tctaaatttt cttcaccacc actggcaaaa
    12181 atttcatctt catctctttg aacaataata gcagttacca actcatcatt ttcatccaag
    12241 ttgatcgctc taactcctac acttctgata ttttgatatt cactcaaatt tgtacgcttt
    12301 acaataccat ttttagtaaa gaaacataaa gatttactct catcaaaatc cgtggttgga
    12361 ataatagcca tgattttttc ttcagcttgt aaattaataa gatttaccac tgcttttcct
    12421 ttagccgttc ttgagccttc aggaatttta taaactttaa gccaataaag ctgtccacga
    12481 tctgttacaa acataagcgt atcatgtgta tttgccgtaa agaaactttc tataaaatca
    12541 tcatcataag tcgtaacggc taattttcct tttccgcctc gtttttgctt ttcatattgt
    12601 ttactaggca cacgcttaat ataaccacga tgggtaatag ttacaaccat attttcatta
    12661 ggaatcaaat cttcaatatc aatatcatca taatcatctt caatttgagt aatacgtggc
    12721 acatcaaatt tacttctaat ttcttttaat tcatcgcgaa ttaaattttc aagcaaggtt
    12781 tcacttttta aaatttcttc aagtcttgca atttctttca ttaattctgc aagttcattt
    12841 tcgatttttt ctctttcaag tcctgttaaa cgacctagtt tcatatctaa aatagcattg
    12901 gcttgaagct cactaagacc aaatttagct accaaagaat ctcttgcggt attattatca
    12961 gaactgtttt taattaaagc aatcacttca tctatattat caagtgcaat tttaagacct
    13021 tctaaaatat gagctcttgc tcttgccttt tgaagttcaa aaatcgttct tctaataata
    13081 actgtttttc tatgggttaa gaaaagattt aaaagttcta acaaagagaa aattttaggt
    13141 tctttattgt gaattgccaa cataatcaca ccaaaagtac tttccatagt ggtagattta
    13201 aatagattat ttaaaacaat ttcactcata gcctcacgtt taagctctat aacaacgcgg
    13261 attccttctt tattactctc atctcttact tcagatattc cttcaatttg cttttcttta
    13321 acaagctctg caatctgctc tataagccta gctttattgg tttgataagg aagctcatct
    13381 ataacaataa catctttatt tgtctttttt tcaatatgag ttttagctcg cactttcaca
    13441 cgaccacgcc ctgtgcgata agcttctata atgccttttt taccataaat tattccacct
    13501 gttggaaaat ctggaccttt aataaactgc ataatctctt ccaagcttgc atctttatta
    13561 tcaagcaaat ataaaagtcc atctatcaac tcatttaaac tatgaggtgg gatgtttgtc
    13621 gccataccta cagctatacc acttgaacca tttaataata aatttggaac cctagaaggt
    13681 aaaacatcag gttcactttc tgaaccatca taatttggaa caaaatcgac cgtatcttta
    13741 tctatatctt ttaaaagctc atgagaaagt ttactcattt ttgcttcagt ataacgcatc
    13801 gcagcggcgc tatcaccatc tatagatcca aagttgcctt gtcctgtaat acttggatat
    13861 ctcatagaaa aatcttgagc cattctaacc aaagcatcat aaactgctgt atctccatgt
    13921 gggtgataac ggcctataac agcacccact atacgggctg atttgacaaa atctgttcta
    13981 ctttttgcct catcattttg catagcatat aaaattcttc tatgaacagg ctttaaacca
    14041 tctcttgcgt caggcaaagc acgacctata ataacactca tagaatagtc taaataacta
    14101 ctttttatag aattttctat atctacaagt tcaatatcag aatctttgct aaaaatattc
    14161 tccataaaaa tccttctatt agttcaaagt tttgattata gcatattaaa cttttgcatc
    14221 agctaaaaca agagcaaaaa gtacagaaat tttattttct tctaaaactt ttttagcttc
    14281 caaaaggcta gaaccagtcg ttacaatatc atctaccaaa attacaggtt cttgaatggt
    14341 ttttaagagt ttataatttc ttttatgttt ttgacgaaat tctaaacttt ttccagaata
    14401 tttaatatga ttttgtgctt ttaaaacatt aaaaacaggt tttacaaatt ttgttttaag
    14461 atatctagct aaaatagcag aatgtgaata aagcatatct tcaaccttat catctaaagc
    14521 tataacatta attgtcattc taggatcaaa aaaatcttta aattttgcaa aacttaattt
    14581 agcaagcatt ttataaacga aataaccata aaaataatgt ttagagtgaa gcaagtgttg
    14641 tatttcatgg tatttataaa aagaatagac tttgaaatta ttatcaagct ttcttacatt
    14701 taaggaaaat tcagaaagct ctagctcaca taaatcacaa aagcaaagca gagcaaaagc
    14761 tccgcaattt atacacctca aagttcagag attaaactag ctgctttatt tgccatttgt
    14821 tttattaaca aatgagtata aaaagttgtt tcttttagat catcgaaacc ttgtacatct
    14881 tgcttggtgc ggattgtaaa tttcttattt ttgtttatat cgctaacttg taaaactcct
    14941 actagttttg aatgtaatcc tgtagcatct tgagttgctc cataagatat aaattctaaa
    15001 tcaatcttac tcacataagg tgaattttga tcgttattgt caagcacaac tattcctcta
    15061 gcttcaagtt cttgttttaa ataagtataa aataccgcat taaaattcac atcaacaaat
    15121 aactttttcc ctttagcatt taaaactttt tgcccttctt ttaaatcata aaatctatgc
    15181 aaataaacct tttttaaagc aataccagtg tctaaagtgc gtttattggc acaacattga
    15241 attccaacat cgctaatgta taaaagccct ttaatctttg cttcaaagcc atcaggactt
    15301 tcacaagaac tgcattgaga atttttagaa atttgattaa cttgagcaaa agtatcttgt
    15361 ttagttgcgc aagcactcaa aaataaaata ggcactataa aaatcaaaaa ttttttaaac
    15421 attttttctc cttagaaaat tattttaaaa ttgtattaaa aatacaagca aatttcaagc
    15481 caagttttaa atttatcatc aatctatctt taaaacactc aaaaaagcct cttgaggtaa
    15541 atttacctta cctatagctt tcattctttt tttaccttct ttttgctttt ctaaaagctt
    15601 tctttttcta gtaatatccc caccataaca ttttgctgtc acatttttac ccatggattt
    15661 aacggtttcc cttgcgatga ttttatttcc aatacttgct tgaatggcta cttcaaaaag
    15721 ctgtctagga actatttctt tcatagcgct aacaagttct cttcctttac tttgtgcttt
    15781 ttcattaggc acgataatgc ttagcgcatc aacattttca cccgccactt taatatcaag
    15841 ttttaccaaa tcccctactc taaattctat aggttcataa tcaaaactcg catagccttt
    15901 tgttaaggac tttaatttat cataaaaatc catcacaatc tcatttaaag gcacatcata
    15961 ttctagcaaa acgcgctcag gtgtgatata gtccatttta acctgtactc ctcttttgcg
    16021 atttaaaaga gtgattaaat tccctaaaaa ttcacttgga gtaatgatag tggctttaac
    16081 ataaggctct tttatatgat cgattttatt aacaggagga agctcgctag gattttgaat
    16141 tttaacaagc tctccatcgg tttgataaat ttcataagtc acagttggag ctgtagcaat
    16201 caaatcaaga ttaaattctc tctcaagtct ttctttaatc acttccatat gtaaaagtcc
    16261 taaaaaccct accctaaaac caaagcctaa agccaaagaa gtttcaggct cataagtaat
    16321 agaactatcg ttaagcttta gcttatccaa agcatctctt aaatcttcaa atttatccgt
    16381 ttctatggga taaagtcctg cgaacacaaa agctttagcc ttttcaaaac cccctatggc
    16441 ttctttagct ttatttttta ctaaagtaat agtatcgcct acttgtacat cgcctacagt
    16501 tttaagccct aaaaccacca cgcctacttc acccgattgt aaagattgag ttttaattgg
    16561 acttaaaggg tggggataaa aaagatcttg aactatatgt tttttatctg tactcatgac
    16621 taaaacttca tcatttttag ctatatttcc ttcataaatc ctaaccaaag ccaaagcacc
    16681 caaataatta tcaaaccaag aatcataaat taaagcctta gtaggagctt catcatctgt
    16741 ttttggtgca gggattttag tgataattgt ttctataagc tcttttatac ccactcctgt
    16801 ttttgcactc acgcaaattg catctttgca atctatacct ataatatgct cgatttcatg
    16861 cttgactttt tcaacatcag cattaggtaa atcgatttta ttaatcacag gaatgatttc
    16921 aagattattt tcaagtgcta tataaacatt agctatagtc tgtgcttcaa caccttgaga
    16981 agcatctact acaagtaaag ccccttcaca acttgccaaa gaacgactca cttcataaga
    17041 aaaatccaca tggccaggag tatcaataag atttaaaaca aaattttcat tattaaattt
    17101 ataatttaaa cgcactgatt gtgcttttat ggtgatacca cgctcttttt ctatatccat
    17161 agtatccata acttgcgaac tcatctgcct atcgctaata gcaccacact cgctaataat
    17221 cctatctgca agagtagatt ttccatgatc tatatgagct ataatagaaa aatttctaat
    17281 attttttacc gacaaaa
//
LOCUS       DAPWGO010000029        16967 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.030, whole genome shotgun sequence.
ACCESSION   DAPWGO010000029 DAPWGO010000000
VERSION     DAPWGO010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16967
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.030"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            147..1928
                     /locus_tag="RJ336_000863"
     CDS             147..1928
                     /locus_tag="RJ336_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoX family phosphatase"
                     /protein_id="HDZ5213320.1"
                     /translation="MERRLFLKGSALGSMVAFFASSNLSAAMLKNKDLLGFKAVSAST
                     QDKVIVPQGYEAKVLISWGDPLFSKAKPYDENKIIDMNAVKNAHLVFGDNDDGMSFFS
                     LSKNRGILAVNNEYINPEIMFNHHGKNLSKEDVLYEQASVGVSILEIKKKGDDWTVVL
                     DSKYNRRIDANTKMQVSGAAKKEVLKNEKFVHGTFANCANGQTPWGTYITCEENFDDF
                     FGSLDENLEFNDSLKRYGFNKTSLYGWEKFDERFDLAKNIDEANRFGWIVEINPFDVK
                     STPVKRTSLGRFKHENAEIIVEKDGSVIVYMGDDEMNEFIYKFVSKHKYKKGADTSKI
                     LDEGTLYVGQFNGKVGDFKGQGKWIALEYGKNGLDEKNGFKSQAQVLINTRLAASIVG
                     ATPMDRCEWIASHKQSGSKEVFATLTNNKNRQEPNAANPRTKNVYGQILKWMPKNSHK
                     DDDFTWEIFALAGNPDNQQGLYKGSNNITSENKFNSPDGLKFDRDGRLWIQTDGSYSN
                     KDEYEGMGNNCMLAANPKTGEIRRFLTGPIACELTGIAFSEDYTTMFVGIQHPGEGLK
                     GSTFPYGKTPRSSVIMIRKLDGGVIGS"
     gene            complement(1966..2904)
                     /gene="trxB"
                     /locus_tag="RJ336_000864"
     CDS             complement(1966..2904)
                     /gene="trxB"
                     /locus_tag="RJ336_000864"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDZ5213321.1"
                     /translation="MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSS
                     EIENYPGVAQVMDGISFMAPWNEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTE
                     LAKAVIVCTGSAPKRAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEA
                     LYLANICSKVYLIHRRDEFRAAPSTVEKVKKNEKIKLITSASVDEVYGDKMGVTGVKV
                     KLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDGKFLCNMEEAGQVSVDLKMQTSVAGL
                     FAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESLH"
     gene            complement(3038..3352)
                     /gene="trxA"
                     /locus_tag="RJ336_000865"
     CDS             complement(3038..3352)
                     /gene="trxA"
                     /locus_tag="RJ336_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDZ5213322.1"
                     /translation="MGKYIELTSDNFAQAKEGVALVDFWAPWCGPCRMLAPVIDELAN
                     DFDGKAKICKVNTDEQGDLAAEFGVRSIPTLIFFKNGEVVDQLVGAQSKQAISDKLNS
                     LL"
     gene            complement(3409..3747)
                     /locus_tag="RJ336_000866"
     CDS             complement(3409..3747)
                     /locus_tag="RJ336_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDZ5213323.1"
                     /translation="MGLKAYLDGILGEDKACKFLKKQGFEILKRNFHSKFGEIDIIAK
                     KDGILHFIEVKFTQNDYEVSERLDRKKLEKILKTIEFYHLKNGISSDFQIDLICIKND
                     VIQFCENISF"
     gene            complement(3747..4994)
                     /locus_tag="RJ336_000867"
     CDS             complement(3747..4994)
                     /locus_tag="RJ336_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HDZ5213324.1"
                     /translation="MKVAILGYGTVGSAVVKFLLENDKLIRARCGQSITPVIALARSP
                     KKNALIPITHSVEEILNADVDVFVELMGGVDEAFKIVNEILKKKKAVVTANKAMLAYH
                     RYELENLAKNLAFGYEASVAGGIPIIKVLKEGLSANNILAIKGILNGTSNYILSSMSQ
                     KNMSFEQALQIAQNLGYAEADPTFDIEGQDAAHKLLVLSSIAYNLKAKPEDILIEGIS
                     EIAPEDMYFANEFEFTIKLLGIAKVRENKVELRVHPTMIDKEKMLAKVDGVMNAISIN
                     GDLLGESLYYGAGAGGEATASAVISDLMDIARDQVKAPMLGFVNTLEYELLSKDEIYT
                     KYYLRVKVEDKIGVLSKITQLMSENNISIDSFLQKPKKNDENYSTLFFTTHLTYEKSI
                     QNLLEILRKQDFIKTKPFMMRIE"
     gene            complement(4998..6200)
                     /locus_tag="RJ336_000868"
     CDS             complement(4998..6200)
                     /locus_tag="RJ336_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HDZ5213325.1"
                     /translation="MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPD
                     GKTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAICNWYKRKYNVNLDPENEVVATM
                     GSKEGFVNLARAIINPGDVAIVPTPAYPIHTQAFIIAGGNVAKMPLAYNEKFELDENQ
                     FFENLHKTLNESIPRPKYVVVNFPHNPTTVTCEKSFYERLIATAKKERFYIISDIAYA
                     DLTYDDYKTPSILEIEGAKDVAVETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSW
                     FDYGMYTPIQVAATIALDGDQTCVDEIRATYDKRMHILLEAFENAGWKLQKPRASMFV
                     WAKLPESKRHLKSLEFSKQLLQRASVAVSPGVGFGEAGDEYVRIALIENENRIRQAAR
                     NIKKYLKE"
     gene            complement(6212..7018)
                     /locus_tag="RJ336_000869"
     CDS             complement(6212..7018)
                     /locus_tag="RJ336_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213326.1"
                     /translation="MVKKIIILTLWVNISFAISSLELAKNLVNNSSKNSQLELLFSNN
                     SYIDNNGNCDIAKISQILKTNSLIALTLSNPQSLRLNFKAKADEVMFFKILSDVLTDA
                     GYIYFIPTDLILREGNIDYTIQVESQYVLDPGTLYNLLKENSVYINNIKRIRAYDYEY
                     DLNFSNAVLKTNTNVNLNTPKSLEKPLKDYVLDLKNATNLIIDANDLDNWFPKIFFLD
                     KNLNLIKAVKSENKNNHFSELIPNGAIYAIVSDMYSLDNIRRGLKITLKK"
     gene            complement(7012..7950)
                     /locus_tag="RJ336_000870"
     CDS             complement(7012..7950)
                     /locus_tag="RJ336_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213327.1"
                     /translation="MLNWKKIQELNLKEVAAKTQIELDFLEALVEKNFAVLSRFNVKG
                     FVKILSREYELDFSDFNEEYEAYLNENNPTPQTKSKMITPKLDAYSQKSSNAWPFLIV
                     LIVLVIIGSGIYYFDTLKTFFKDEQNNTSATVIDIIGQAQENLKSLGGNNVVVIDNNK
                     AQETNQTESVLPSQNISLQENDKNISIENNISENNTTLLDEEKNTQIQEDTNTPKTDS
                     LKEAHFKTSTKIWIGLIDLKSLKKTSFVKEKDFNISLDKDQLILTGAAALTMFDQENK
                     EQKFPAGISKRFLIKDGKITSISAAEFVKLNKGKEW"
     gene            complement(7943..8626)
                     /gene="rlmB"
                     /locus_tag="RJ336_000871"
     CDS             complement(7943..8626)
                     /gene="rlmB"
                     /locus_tag="RJ336_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDZ5213328.1"
                     /translation="MIVYGKQIFFYILEYHKDCINELYLAKECDKTTFSKIAKSGFKI
                     KKLDFKTAQAYAKGGNHQGFLLDIKESSFANLNEIKKNDFIVMLYGISDVGNIGAITR
                     TAYALGVGALIFIGEKLAMEGVIRTSSGAALDLPIVISNDALSVINELKQVGFYFYAS
                     DGSGKEIHSVKISNGKKVLVLGSEGFGLSSKIVKKCDECVGIAMKNNFDSLNVSAAFA
                     ILCDRMLNA"
     gene            complement(8640..9464)
                     /gene="rsmI"
                     /locus_tag="RJ336_000872"
     CDS             complement(8640..9464)
                     /gene="rsmI"
                     /locus_tag="RJ336_000872"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDZ5213329.1"
                     /translation="MLYFIPTPIGNLSDISFRALELLKTCDLVFCEDTRVSKSLISLL
                     NTKFHTDIHISKFIALHSHNEKEVLASIDLKIFEKNVAYLSDAGMPGISDPGKALVEF
                     AQENNITYEILPGANAALVALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNFPYPS
                     IIYESPKRILSLVEQIMILDSQREIFLIKEISKKFEKKFKGNAKELSEILKKSNLNGE
                     WVVVLQSKEQNFLQNTLCEKDIMDLELPLKAKAKLLSKINGKNAKEIYQKLLLSQD"
     gene            complement(9467..9667)
                     /gene="rpmE"
                     /locus_tag="RJ336_000873"
     CDS             complement(9467..9667)
                     /gene="rpmE"
                     /locus_tag="RJ336_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HDZ5213330.1"
                     /translation="MKKEIHPEYVECKVSCACGNTFTTKSNKAELRVDICSNCHPFFT
                     GSEKIVDAAGRVEKFKKKYAMQ"
     gene            complement(9746..10402)
                     /locus_tag="RJ336_000874"
     CDS             complement(9746..10402)
                     /locus_tag="RJ336_000874"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDZ5213331.1"
                     /translation="MQFLYNKQAGEEFIQLQGENFNHLKVRRVKENSELNLRNLQDNF
                     LYNYTITNLTRNSCTLKFLNKKSQNIKQSELNLALAIIDIKILEKTLPFLNELGVKKL
                     HLVFTNFSQRNFKIDLERFEKIIISSCEQCGRNTKMDLIIHQSTQEFVQKFPNAIMVD
                     FQGEQQSHFDEKELYFIGPEGGFNNDERLLFNRKISLKSSNILKSQTAIIAIASKILL
                     "
     gene            complement(10404..10811)
                     /locus_tag="RJ336_000875"
     CDS             complement(10404..10811)
                     /locus_tag="RJ336_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213332.1"
                     /translation="MDQSYEFFLALHLYSLYASGFLMLFYLILTQGNFKTEFIFIRRI
                     RLFLPIYYLFLALIIFTGCLLSAMKQFQMNVNIWVMIFSWILIFALAIFHFVCFKKAR
                     RFRKYATFRWISCLILPFEIFLLFLPFLIERYL"
     gene            complement(10811..11236)
                     /locus_tag="RJ336_000876"
     CDS             complement(10811..11236)
                     /locus_tag="RJ336_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDZ5213333.1"
                     /translation="MQKAKILIALSFFLLVLSACSNDEKNISKTQNTDQEVVQIEQND
                     EKTELSDSNLPLPVDDEAQSLDDEHEANPTIINSLYKQKCATCHGEKGELKPKNSTAI
                     KTLGNKIFIQKIKMIKDKNHSFLSDEQIQNLADFINKGK"
     gene            complement(11236..11817)
                     /locus_tag="RJ336_000877"
     CDS             complement(11236..11817)
                     /locus_tag="RJ336_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HDZ5213334.1"
                     /translation="MIIRKLFEFENAHIVRFCSSKRCKSSIHGHSYKVEVLLESKYLD
                     NAGMVYDFGLLKTYIRQIIDSFDHAITLFKYDDAKYLEEMKKYSSRWICLPVNVSAEN
                     FCRVFFILIDALLKQTKMVNGEQGVTLQSIIVHETRTGYAQGFREDAYSELMSKISLQ
                     DIEFSNGIKAEWNDIDFYNKLKNEEIFINPKEI"
     gene            complement(11814..12557)
                     /locus_tag="RJ336_000878"
     CDS             complement(11814..12557)
                     /locus_tag="RJ336_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDZ5213335.1"
                     /translation="MQLVESFLSIQGEGKYNGKLAIFMRFAGCNFNCLGFNVKISKND
                     KTLIGCDTIRAVFTKDFKESYETLNANELLKRVIKLKQDFDPIVVITGGEPLIHYENP
                     EFIKFIQMLLKNKFEIHFESNGSIEIDFDRYPFYKECIFALSVKLQNSGIKKDKRLNF
                     KALKAFKNYAKDSFYKFVLDANTLDNSFLEINEILKEAPNQIFCMPMGENEQNLKKNA
                     QKIAEFCIKNGYNYSDRIHIRLWNDKEGV"
     gene            complement(12560..13522)
                     /gene="moaA"
                     /locus_tag="RJ336_000879"
     CDS             complement(12560..13522)
                     /gene="moaA"
                     /locus_tag="RJ336_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDZ5213336.1"
                     /translation="MLIDQFGRKINYLRISVTQRCNFRCLYCMPKIPFDYQPKENLLS
                     FEELFLFVKAAIDEGIEKIRITGGEPLLRKDLSIFIKMISDYKSDIDLAITTNGFLLK
                     DFAKDLKNAGLKRLNISLDTLDHKKAKTLAQKDVLDSVLSGIDEALNLDLKVKLNTVA
                     LKNLNDDELISLLEFAKSKKAQIRFIEFMENTHAYGKLQGLKRDEIIQILSQKYQIQL
                     IKKDEKAPVSIYKADDYEFGIIDPHSHEFCDSCNRIRLSAEGLLIPCLYFDEALSIKE
                     AVRKGDIKAAVEILQEVLRNKPEKNKWSVVDNETSSRAFYQTGG"
     gene            complement(13535..14050)
                     /locus_tag="RJ336_000880"
     CDS             complement(13535..14050)
                     /locus_tag="RJ336_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213337.1"
                     /translation="MSDDVLYLVFIIVLLIAMLAYMNIKERENNAKIAKLQNVIEDIT
                     KELHYFRKELGVKDDSEEDEDYKTSLLKEEIMIELDKQISSKITPVLRTLKTMEHIIE
                     DFQNEQQNRLLNLEQKAQSMAKLTPNYDTEEQKIENLFKEGKSIEQIAKDLRIGTGNV
                     ELVLKFKKLIK"
     gene            complement(14047..14544)
                     /locus_tag="RJ336_000881"
     CDS             complement(14047..14544)
                     /locus_tag="RJ336_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213338.1"
                     /translation="MELTLFKAGFEAHLECCEIENNRFLGEYLKLGAISQILKWKKLA
                     LRIDFDEGEKIIFDLLLSLKEDILRLENSLDKNKELIPLKQKGVIESLNFEYLNFLDT
                     ILEEDKEYYLRFDLNNQKIAIFIKAQSQTLAKIIKIKPEDKMAFDAFVVEIQRNMIRN
                     KKGQE"
     gene            complement(14535..15419)
                     /locus_tag="RJ336_000882"
     CDS             complement(14535..15419)
                     /locus_tag="RJ336_000882"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate polyprenyltransferase"
                     /protein_id="HDZ5213339.1"
                     /translation="MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLANDTAWF
                     GFKALILGIICAVSARNFAMATNRLMDEDIDKDNPRCANRPNVSGKIGRKSVWIFIII
                     NALIFISCSYFINTLAFYLSFPVLFVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVI
                     IMGEIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKVGLHSIPAKFGSKATLFISAF
                     CHILAVLFWLLFVWEVWGIALGKIALIGVIISGIILALEHKIVHKNFAHIDRAFFTLN
                     GYLSIIFFIFIWIDLLWN"
     gene            15490..16359
                     /gene="miaA"
                     /locus_tag="RJ336_000883"
     CDS             15490..16359
                     /gene="miaA"
                     /locus_tag="RJ336_000883"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDZ5213340.1"
                     /translation="MFFEIALIGTTASGKTYIANTLAREFDAVVLSLDSLCVYKEINI
                     ASAKPSQDDLASIKYFGVNLLSVNEHFNVELFIREYQKAKEFALARNLPLIIVGGTGF
                     YLKTMIDGLSEKTLESKSSLNNDEIYALLLNIDPNYKIEKNDTYRLKKWLGIYEQTRE
                     IPSEFLKRTQKTGVLKDIEIYELAWDKEILKKRIKTRTKEMLDNGLLDEAKILFSKFD
                     HKLKALNSIGLKECKEYLDGEISFKELENLITIHTTQLAKRQRTFNKKFQSKALEFDK
                     ALAILRMKFSIEK"
     gene            complement(16345..16908)
                     /locus_tag="RJ336_000884"
     CDS             complement(16345..16908)
                     /locus_tag="RJ336_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HDZ5213341.1"
                     /translation="MDFYSLIFLSCALGMDAFAVSLCKGFSVKKLHLKHYLIVGIYFG
                     GFQALMPTIGYFIGITFASFIASIDHWIAFILLSLIGLKMIKESLENENCDSNANQFG
                     FKTMLALAIATSIDALAVGVSFAFLNVNLLLAIFLIGIITFILCIIALKIGNKFGIYL
                     KNKAELLGGLVLIILGVKILIEHLFFD"
BASE COUNT         5844 a         2698 c         2227 g         6198 t
ORIGIN      
        1 aaaagatttt aattaatcat ttatacctag tgaaaaacta ggtataaatt ttcccttcaa
       61 tttaaatttt tcatcaaagt ttctaaaaag tttccaaata tttttatact tccattgttt
      121 taaattttaa tatggagtaa aaacaaatgg aaagaagatt gtttttaaaa ggttcagctt
      181 taggttctat ggtagctttt tttgcaagtt caaatttaag tgctgctatg cttaagaata
      241 aggatttgct aggttttaaa gctgttagtg caagcacgca agataaagtt atagtaccac
      301 aaggttatga agcaaaggtt ttaatttctt ggggtgatcc actttttagt aaagcaaaac
      361 cttatgatga aaataaaatc atcgatatga atgcagttaa aaatgctcat ttggtttttg
      421 gagataacga tgatggtatg agtttttttt cactttcaaa aaacagagga attttagccg
      481 ttaataatga atatataaat cctgaaatca tgtttaatca tcatggtaaa aatttaagca
      541 aagaagatgt tttatacgag caagctagtg taggtgtaag tatcttagaa atcaaaaaaa
      601 agggtgatga ttggaccgtg gttttagatt ctaaatataa ccgcagaatc gatgcaaaca
      661 ctaaaatgca agtaagtgga gcagctaaaa aagaagtttt aaaaaatgaa aaatttgttc
      721 atggaacttt tgcaaattgt gcaaatggac aaacaccttg gggaacttat atcacctgtg
      781 aagaaaattt tgacgatttt tttggaagtt tagatgaaaa tctagaattt aatgactctc
      841 ttaagcgcta tggatttaac aaaactagtc tttatggatg ggaaaaattt gatgaaagat
      901 ttgatttagc taaaaatatc gatgaagcca atcgttttgg ttggatagtg gaaatcaatc
      961 cttttgatgt aaaaagcaca cctgttaaaa gaacttcttt aggtcgtttt aaacatgaaa
     1021 atgcagaaat tatcgtagaa aaagatggtt ctgttatagt ttatatgggt gatgatgaga
     1081 tgaatgaatt tatttataaa tttgttagca aacataaata caaaaaaggt gctgatacaa
     1141 gtaaaatttt agatgaaggc actttgtatg taggacagtt taacggcaag gtgggagatt
     1201 ttaaaggaca gggaaaatgg atagccttag aatatggcaa aaacggccta gatgaaaaaa
     1261 atggttttaa gtctcaagct caagtactca ttaatacgcg tcttgctgca agcattgtag
     1321 gtgcaactcc tatggataga tgtgaatgga tagcaagtca taaacaaagt ggttctaaag
     1381 aagtatttgc aacactaaca aataataaaa atcgccaaga acctaatgca gcaaatccaa
     1441 gaactaaaaa tgtttatgga caaattttaa aatggatgcc aaaaaattct cataaagacg
     1501 atgattttac ttgggaaatt tttgctcttg ctggaaatcc tgataaccaa caaggcttat
     1561 ataaaggctc aaataatatt acaagtgaaa ataaattcaa ttctcctgat ggacttaaat
     1621 ttgatagaga tggaagactt tggatacaaa cagatggatc ttattctaat aaagatgaat
     1681 acgaaggtat gggaaataac tgcatgctag cagcaaatcc aaaaacaggg gaaatcagac
     1741 gctttttaac agggcctatt gcttgtgaat taacagggat tgcttttagt gaggattata
     1801 ctacaatgtt tgtaggcata caacatccag gagaaggttt aaaaggtagt acttttcctt
     1861 atggaaaaac accaagatcg agtgtaataa tgataagaaa acttgatggt ggagtgatag
     1921 gaagctaaat aaaaataaag ttgcttttag caactttata aaatcttaat gcaagctttc
     1981 tatataagcc atagcactta atgcagctac agctccatca cctgcagcac aaataacttg
     2041 cttaggcgca tcttttctaa ggtcccctgc ggcaaaaagt ccagcaacgc tagtttgcat
     2101 tttaagatca acacttactt gcccagcttc ttccatattg cataaaaact taccatcgtc
     2161 ttgttttaaa atttcatttc ttacattaag accaacaaaa gtaaaaattc ctggaacatt
     2221 taaatctcta atactaccat cttttaattt tacttttaca ccagtaacac ccattttatc
     2281 accatatact tcatctacgc ttgcactagt aatgagtttt attttttcat ttttcttaac
     2341 tttttctact gtagatggag ctgctctaaa ttcatctctg cggtggataa gataaacttt
     2401 agaacaaata tttgctagat acaaagcttc ttctaaagcc gtatctccac cacctaaaac
     2461 tgcaacttct ttatttttat aaaaaaatcc atcacaagtt gcacaagtgc ttacaccttt
     2521 tccaaaaaat tcatcttcgc ctttaaaacc tgctcttttt ggagctgaac ctgtacaaac
     2581 tatcacagct ttagcaagtt ctgttttgcc accttctaat ttgatggtaa aacttccatc
     2641 actatttttt aaaatttgct ctactccaac catttcatgt tttaaaccaa aacgcataca
     2701 ttgttcattc caaggagcca taaaagaaat tccatccata acttgggcta cacctggata
     2761 attttctatt tcagaacttg aggtaatttg tccaccaggc ataccttttt caaacattac
     2821 tacattctta agaccacctc tagttgcata aagtccggca ctaagtccag caggacctcc
     2881 acctatgatt gctacatcta acatttacat ttcctttata ttgaatttta ttattaataa
     2941 tgatataaaa attattctta atagtagtta ataaaaatta ttatttagta taaatttgaa
     3001 atttttaaga agaaggctag ttatactagc ctttagttta tagtaaagag tttagtttat
     3061 cactaattgc ttgtttagat tgtgcaccaa cgagttgatc tacaacttca ccatttttaa
     3121 agaaaataag tgtaggaata gagcgaacac caaattcagc tgctaaatca ccttgttcat
     3181 ctgtatttac tttgcaaatt ttagctttac catcgaagtc atttgcaagt tcatcaataa
     3241 ctggagcaag cattctacaa ggtccgcacc atggagccca aaaatcaact aaagctacac
     3301 cttcttttgc ttgagcaaaa ttatcacttg ttaattcaat atattttccc ataatttttc
     3361 ctttctttaa tttttgtcta attgtatttt atttttttaa atatcagctt aaaaacttat
     3421 attttcgcaa aattgtatca catcattttt aatgcaaatc agatcaatct gaaaatccga
     3481 tgaaattcca tttttaagat gataaaattc tatagttttt aaaatttttt caagtttttt
     3541 tctatccaaa cgctcggaaa cttcataatc attttgagta aatttaacct ctataaaatg
     3601 caaaattcca tcttttttgg ctattatatc gatttctcca aatttagaat ggaaatttct
     3661 ttttaaaatt tcaaagcctt gtttttttaa aaatttacaa gccttatctt cacctaaaat
     3721 tccatctaaa taagctttta aacccattat tctatacgca tcataaaagg tttggttttt
     3781 ataaaatctt gtttgcgtaa aatttcaagc aaattttgta tgcttttttc ataagttaaa
     3841 tgtgtagtaa aaaacaaagt actgtaattt tcatcatttt ttttaggttt ttgtaaaaaa
     3901 ctatcgatag aaatattatt ttcactcatc aattgtgtga ttttagataa aacccctatt
     3961 ttatcttcaa ctttcaccct taaataatat tttgtataaa tttcatcttt gcttaaaagc
     4021 tcgtattcta aagtattcac aaaaccaagc attggtgctt ttacctgatc tcttgctata
     4081 tccataagat ctgaaatcac agcacttgca gtggcctctc ctcctgctcc tgctccataa
     4141 tacaaacttt cacccaacaa atctccatta atgcttatag cattcatcac tccatcaact
     4201 tttgcaagca ttttttcttt atctatcata gtaggatgca ctcttaattc tactttattt
     4261 tcacgcacct tagctatacc taaaagtttt atggtaaatt caaactcatt agcaaaatac
     4321 atatcttcag gtgcaatttc actaataccc tcgatcaaaa tatcttcagg tttagcttta
     4381 agattataag cgatacttga taaaacaagt agtttatgtg ctgcatcttg cccttctatg
     4441 tcaaaagttg gatcagcctc tgcataacct aaattttgag ctatttgtaa ggcttgttca
     4501 aaactcatat ttttttgact catagaactt aaaatataat tactcgtacc atttaaaatc
     4561 ccttttatag ccaaaatatt atttgcactt aaaccttctt ttaaaacctt gataatagga
     4621 attcctccag ctacacttgc ttcataacca aaagctaaat ttttagccaa attttcaagc
     4681 tcataacgat gataagcaag catagcttta tttgcagtaa caacagcttt tttctttttt
     4741 aaaatttcat tcactatttt aaaagcttca tccaccccac ccattaattc tacaaaaaca
     4801 tctacatcag catttaaaat ttcttcaaca ctgtgagtaa ttggaattaa agcatttttt
     4861 ttaggacttc tagcaagagc gatcacagga gtgatacttt gtccacatct tgcacgaatg
     4921 agtttatcat tttctaaaag aaatttaacc accgcacttc caacagtgcc ataaccaaga
     4981 atcgctactt tcataactta ttcttttaaa tattttttga tattgcgtgc agcttggcgt
     5041 atgcgatttt cattttcaat taaagcaatt cttacatact catcacctgc ttcgccaaaa
     5101 cctaccccag gacttactgc aacactagca cgttgtaaaa gttgctttga aaattctaaa
     5161 ctttttaaat gtcttttgct ttcagggagt tttgcccaaa caaacatact tgctcttggt
     5221 ttttgaagtt tccagcctgc attttcaaaa gcttcaagta aaatgtgcat tcttttatca
     5281 taagttgcac ggatttcatc cacacaagtt tgatctccat ctaaagctat ggtagctgct
     5341 acttgaatag gtgtgtacat accataatca aaccaagatt ttattttttt aagcgcactg
     5401 actaagcgtt tatttcctac tacaaaacct acacgccagc ctgccatatt gtaagatttt
     5461 gaaagagtgt aagtttctac cgctacatct tttgcgcctt caatttccaa aatagaagga
     5521 gttttatagt catcataagt taaatctgca taagcaatat ctgaaataat ataaaatctt
     5581 tctttttttg ccgttgctat caatctttca taaaaacttt tctcacaagt tactgttgtt
     5641 ggattatgcg ggaaattaac aacgacatat tttggacgcg ggatgctttc atttaaagtt
     5701 ttatgcaaat tttcaaaaaa ttgattttca tcaagctcaa atttttcatt ataagctaaa
     5761 ggcatttttg ctacattacc tcctgctata ataaaagctt gagtatgtat aggataagca
     5821 ggagttggta caatagcaac atctccagga tttataatcg ctcttgcaag atttacaaaa
     5881 ccctcttttg aacccatggt agctacaact tcattttcag gatctagatt aacattatat
     5941 tttcttttat accaattaca aattgctaag cgaagtttat aaatccccat ggaagtagaa
     6001 tatcccgagg ttttatcttt gttagcactt tcacaaagtt tatctataat gtgttgtgga
     6061 gttttaccat cgggatttcc cattgaaaag tcgatgatat cctctccagc acgtcttgct
     6121 gccattttta tcgcatttac ctctgcgaaa acataatttg gaagtctttc tatggtatta
     6181 aaacggattt catcaaacat ttcttaatcc tttatttttt aagtgtgatt tttaaacccc
     6241 tacgtatatt atctaaacta tacatatcgc ttacaatagc atatatagca ccatttggaa
     6301 taagttctga aaaatgatta tttttatttt cgctttttac tgctttaatt agatttagat
     6361 ttttatctaa aaagaagatt ttaggaaacc aattgtctaa atcatttgca tcaataatca
     6421 aatttgtagc attttttaaa tcaagcacat agtctttaag gggcttttct aatgattttg
     6481 gagtatttaa attaacattt gtattggttt ttaatacagc attggaaaaa tttaaatcat
     6541 attcatagtc atatgcccta atacgcttaa tattatttat atagacagaa ttttctttta
     6601 agagattgta aagcgttcca ggatctaaaa catattgaga ttctacttgt atggtatagt
     6661 caatatttcc ttctcttaaa atcaaatctg tagggataaa atatatatat ccagcatctg
     6721 ttaaaacatc ggataaaatt ttaaaaaaca taacttcatc agcttttgct ttaaaattta
     6781 gtcttagact ttgaggattt gatagtgtta aggcaattaa agaattggtt tttaatattt
     6841 gagatatttt tgcaatatca caatttccat tattatctat gtaagaatta tttgaaaata
     6901 ataattctag ttgagaattt ttactagaat tgtttactaa attttttgct aattcaagac
     6961 ttgagattgc aaaagatata ttaacccaaa gagtaagaat aataattttt tttaccattc
     7021 tttaccttta tttaatttta caaattcagc agctgaaata cttgtaattt ttccatcttt
     7081 aatcaagaaa cgttttgaaa ttcctgcagg aaatttttgt tctttatttt cttgatcaaa
     7141 cattgttaaa gctgcagccc ctgttaaaat taactgatct ttatctaaag aaatattaaa
     7201 atctttttct ttaacaaagc ttgttttttt aagacttttt aaatctatta aacctatcca
     7261 aatcttggta gaggttttaa aatgtgcttc ttttaaagaa tcagtttttg gtgtatttgt
     7321 gtcttcttgg atttgggtat ttttttcttc atcgagtaga gttgtgttat tttcactgat
     7381 attattttct atgcttatgt ttttatcatt ttcttgtaat gagatgtttt ggcttggtaa
     7441 aacgctctct gtttgatttg tttcttgtgc tttattgttg tctataacaa caacattgtt
     7501 tccacctaaa gattttaaat tttcttgtgc ttgtcctatg atatctataa ctgttgcgct
     7561 agtattattt tgttcatctt tgaaaaaagt tttaagtgta tcaaaataat aaattccact
     7621 tcctataatc actaaaacaa taagaacaat caaaaaaggc caagcgttag aggatttttg
     7681 actataagca tctagttttg gggttatcat ttttgatttt gtttgtggag taggattgtt
     7741 ttcgttaaga taagcttcat actcttcgtt aaaatcacta aagtcgagtt cgtattctct
     7801 gctcaaaatt ttaacaaaac ctttaacatt aaaacgactt aaaacagcaa aattcttttc
     7861 tactaaagct tcaagaaaat caagttcaat ttgcgttttt gctgcaactt cttttaaatt
     7921 taattcttgt atttttttcc aattaagcat ttaacatcct atcacaaagt attgcaaaag
     7981 cagcgctgac attaagacta tcaaaattat ttttcatcgc aatgcccaca cattcatcgc
     8041 atttttttac aattttagag cttaaaccaa aaccctcact acccaaaact aaaacttttt
     8101 taccattgct tatttttaca ctgtgaattt cttttcccga gccatcactc gcataaaaat
     8161 aaaaacctac ttgttttagt tcatttatta cacttaaagc atcgttgctt atcacaatag
     8221 gtaaatcaag agccgctccg ctgcttgtgc gaattactcc ttccatggct aatttttcac
     8281 caataaaaat taaagcccca acccctaaag cataagctgt acgcgtgata gcccctatat
     8341 ttcctacatc gctaattcca taaagcataa caataaaatc attttttttg atctcattta
     8401 aattcgcaaa agaactttct ttaatatcta gcaaaaaacc ttgatgattt ccacctttcg
     8461 cataagcttg agcagtttta aaatcaagtt ttttgatttt aaaacctgat tttgcgattt
     8521 tggaaaaagt agttttatca cattcttttg ctaaataaag ctcattgata cagtctttat
     8581 gatattctaa aatataaaaa aatatttgct tcccataaac tatcatatta aaattttacc
     8641 taatcttgac ttaaaagcag tttttgataa atttcttttg cattttttcc attgatcttt
     8701 gataataatt ttgcttttgc ttttaaaggc agctctaaat ccataatatc tttttcacaa
     8761 agagtatttt gcaaaaaatt ttgctctttt gattgcaata ctacaaccca ttcaccgttt
     8821 aaattagact tttttaaaat ttcagaaagc tctttagcat tgcctttaaa ttttttttca
     8881 aattttttac tgatttcttt aatcaaaaaa atttctcttt ggctgtctag aatcataatt
     8941 tgttctacta aagataaaat acgtttgggg gattcgtaaa taatacttgg ataaggaaag
     9001 tttaaaattt tttctatatc tttttgtctt tctttgcctt tatttgctaa aaaaccaata
     9061 aagataaatt ctttttgaca aaatgccgag cttacaagag caactaaggc tgcatttgca
     9121 cctggtaaaa tttcataggt gatattattt tcttgtgcaa attctaccaa agccttgcca
     9181 ggatcactaa tccctggcat tcctgcatcg cttaaataag ctacattttt ttcaaatatc
     9241 tttaaatcaa tacttgctaa aacttctttt tcattatggg agtgtaaggc tataaattta
     9301 gaaatatgta tatcagtgtg aaatttggta tttaataacg aaatcaaaga cttacttact
     9361 cttgtatctt cgcaaaacac aagatcgcaa gtctttaaaa gttctaaggc tctaaaagaa
     9421 atatcgctta aatttcctat gggagtagga ataaaataaa gcataattat tgcattgcgt
     9481 attttttctt aaatttctct acacgacctg cagcatctac aattttttca ctgcctgtaa
     9541 aaaaaggatg gcaatttgaa caaatatcta ctcttaattc tgctttgttt gactttgttg
     9601 taaaagtatt tccacaagca caacttactt tgcattctac atattctggg tgaatttctt
     9661 ttttcattag ttttccttaa aaattaaaac aataagccgt gattataaat tatttaacat
     9721 aaaaaagaga ttaatttaag aaaagttaaa gcaaaatttt tgaagctata gctataatag
     9781 ctgtttgact ttttagaata ttagagcttt taagagagat tttccggtta aacaataatc
     9841 tctcatcatt gttaaatcca ccttcaggac ctataaaata taattctttt tcatcgaaat
     9901 gactttgttg ttctccttga aaatcaacca taattgcatt tggaaatttt tgaacaaatt
     9961 cttgagtgct ttggtggata attaaatcca ttttagtatt tctaccgcat tgttcacaag
    10021 aagaaataat gattttttca aatctttcta aatcgatttt aaaatttctt tgtgaaaaat
    10081 ttgtaaaaac caaatgtaac ttttttactc caagttcatt taagaaaggt agagtttttt
    10141 ctaaaatttt aatatctata atggctaagg ctaagtttaa ttcactttgt tttatatttt
    10201 gtgatttttt gtttaaaaat tttaaagtgc aagaatttct tgttaaattt gtgattgtat
    10261 agttgtaaag aaaattatct tgtaaatttc taagatttag ctccgaattt tcctttactc
    10321 ttcttacttt taaatgatta aagttttctc cttgaagttg tataaactct tctccagctt
    10381 gcttgttata caaaaattgc attttataga tatctttcta ttaaaaaagg caaaaacaat
    10441 aaaaaaattt caaaaggtaa aatcaaacaa ctaatccatc taaaagtggc atattttcta
    10501 aatcttcttg cttttttaaa acaaacaaag tgaaaaattg ctaaggcaaa aattaagatc
    10561 caagaaaaaa tcattaccca gatattgaca ttcatttgaa attgtttcat tgctgataac
    10621 aagcaacctg taaaaataat caaagctaaa aataaataat aaattggtaa aaataatcgt
    10681 attctgcgaa taaaaatgaa ttcggtttta aaatttcctt gtgttagtat aagataaaaa
    10741 agcattaaaa aaccgctcgc ataaagacta taaagatgta aagctaaaaa gaattcgtaa
    10801 ctttgatcca ttattttcct ttgtttataa aatcagctaa attttgaatt tgttcatcac
    10861 ttaaaaaact atggttttta tcttttatca tttttatttt ttgtataaaa attttattgc
    10921 ctaaggtttt aatggccgtg ctgtttttag gttttaattc ccctttttct ccatgacaag
    10981 tggcgcattt ttgtttatat aaagagttga taatagtagg attggcttca tgctcatcat
    11041 ctaaactttg tgcttcatca tctacaggta aaggcaggtt ggagtcactt aattctgttt
    11101 tttcatcgtt ttgttctatt tggactactt cttgatctgt attttgagtc ttggaaatat
    11161 ttttttcatc attagaacag gcagataaaa ctaataaaaa aaaacttaag gcaattaaaa
    11221 ttttagcttt ttgcattaaa tctcctttgg atttataaaa atttcttcat tttttaattt
    11281 gttataaaaa tctatatcat tccattctgc tttaatgcca ttggaaaatt ctatgtcttg
    11341 aagtgaaatt tttgacatta gctcactata ggcatcttct ctaaaacctt gtgcatagcc
    11401 tgttcttgtt tcatgaacaa tgatgctttg taaagtcact ccttgttctc catttaccat
    11461 ttttgtttgt tttaataaag catctataag tatgaaaaat acgcgacaaa aattttcagc
    11521 acttacatta acaggcaggc aaatccaacg acttgaatat tttttcattt cttctaaata
    11581 ttttgcgtca tcatatttaa aaagagtgat agcatgatca aaactatcaa taatttggcg
    11641 tatataggtt tttaaaagtc caaaatcata gaccattcca gcattatcta aatatttgct
    11701 ttcaagtaaa acttcaactt tgtaagaatg tccatgaatg ctacttttgc aacgcttaga
    11761 agaacaaaat ctaacaatgt gtgcgttttc aaattcaaat aattttctta taatcataca
    11821 ccctctttat cgttccaaag acgaatatga attctatcag aataattata accattctta
    11881 atacaaaatt cagcaatttt ttgagcattt tttttaaggt tttgctcatt ttcacccata
    11941 ggcatacaaa aaatttgatt tggagcttct tttagaattt cattgatttc taaaaatgaa
    12001 ttatcaagag tattggcatc taaaacaaat ttataaaaac tatcttttgc gtaattttta
    12061 aatgctttta aagctttaaa atttaatcgt ttatcttttt ttatcccact attttggagt
    12121 ttaacgctta aagcaaaaat acattctttg taaaaaggat atctatcaaa atcaatttct
    12181 atgcttccat tgctttcaaa gtgtatttca aatttatttt ttaataacat ttggataaat
    12241 tttataaatt caggattttc ataatggatt aatggctctc cacctgtgat aacaactata
    12301 ggatcaaagt cttgttttaa ttttatcact ctttttaaaa gttcattagc atttaaagtt
    12361 tcataacttt ctttaaaatc ttttgtgaaa acagctctta tcgtgtcaca tccaatgaga
    12421 gttttatcgt tttttgatat ttttacatta aaacctaaac agttgaaatt gcaaccagca
    12481 aaacgcataa aaatagctaa ttttccatta tatttgcctt ctccttgaat gcttaagaaa
    12541 ctttcaacaa gttgcaaaat taacctccag tttgataaaa agcacgagat gaggtttcat
    12601 tatcaacaac actccattta tttttttctg gtttatttct taatacttct tgtaatattt
    12661 ctacagcggc tttaatatca ccttttcgaa ccgcttcttt tatgcttaat gcttcatcaa
    12721 aataaaggca aggtattaac aagccttcag cacttaagcg tatgcgattg caagaatcgc
    12781 aaaattcatg gctatgagga tctataattc caaattcata atcatctgcc ttgtaaatac
    12841 tcacaggtgc tttttcatct ttttttataa gttgaatttg atatttttga ctcaaaattt
    12901 gtataatttc atctcttttt aatccttgta atttaccata agcatgagta ttttccataa
    12961 attctataaa gcgaatttga gctttttttg attttgcaaa ttccaaaaga gatatcagtt
    13021 catcatcgtt taaattttta agagctacag tattaagttt tactttcaaa tctagattta
    13081 aagcttcatc aattccagat aaaacactat ctaatacatc tttttgcgca agagtttttg
    13141 cttttttgtg atctagggta tcaagtgaaa tattaagtcg tttaagtcca gcatttttta
    13201 ggtctttagc aaagtctttt agtaaaaatc catttgtagt tatagcaagg tcaatatcgc
    13261 ttttataatc gctaatcatt tttataaaaa tacttaaatc ttttcttaat aaaggttctc
    13321 cacctgttat acggattttt tcaattcctt cgtctatagc tgctttaaca aataaaaaaa
    13381 gttcttcgaa gcttaataaa ttttcttttg gctgataatc gaaaggaatt tttggcatac
    13441 aataaaggca gcgaaagtta catctttgtg taactgaaat tctaagataa tttatctttc
    13501 taccgaattg atctataagc atttattttc cattctattt tattaatttc ttaaatttta
    13561 agacaagttc tacatttcca gtgccaatgc gtaaatcttt agcgatttgt tctatgcttt
    13621 ttccttcttt gaaaagattt tctatttttt gttcttctgt atcgtaattt ggtgtaagtt
    13681 tagccatgct ttgtgctttt tgttccaaat ttaaaagacg attttgttgt tcattttgaa
    13741 aatcttctat gatatgttcc atagttttta gtgttcttaa aacaggagtg atttttgaac
    13801 tgatttgttt atcaagttca atcataattt cttcttttaa aagagaggtt ttatagtctt
    13861 catcctcttc gctatcatct ttaactccta attctttacg aaaataatga agttctttgg
    13921 taatatcttc tatcacattt tgaagttttg ctatttttgc attattttct ctttctttga
    13981 tattcatata ggctagcatt gcaattaaaa gcacaattat aaaaactaaa taaagtacat
    14041 catcactcat tcttggcctt tcttatttct tatcatattt ctttgaattt caacaacaaa
    14101 agcatcaaaa gccattttgt cttcaggctt aattttgata atttttgcca atgtttgact
    14161 ttgagctttg ataaaaatag ctattttttg attatttaaa tcaaatctta aataatattc
    14221 tttatcttct tctaaaatag tatccaaaaa atttagatat tcaaaattta aagattctat
    14281 tacccctttt tgcttaagcg gtataagttc tttattttta tctaaagaat tttcaagcct
    14341 taaaatatct tcttttaggc ttaaaagaag atcaaaaata attttttcac cctcatcaaa
    14401 atcaatgcgt aaagcaagtt ttttccattt taaaatttga gaaattgctc caagttttag
    14461 gtattctcca agaaaacggt tattttctat ttcacaacat tctaaatgag cttcaaatcc
    14521 tgctttaaaa agtgttaatt ccataataaa tcaatccaaa taaaaataaa aaagataata
    14581 cttaaataac catttagagt aaaaaatgct ctatcaatat gagcaaaatt cttgtgaaca
    14641 attttatgtt ccaaggctaa aataataccg cttataatta ccccaataag tgctattttt
    14701 ccaagtgcta taccccaaac ttcccataca aaaagaagcc aaaataatac cgctaaaata
    14761 tgacaaaaag ctgatataaa taaagtagcc tttgagccaa atttagcagg aatagagtga
    14821 agtcctactt ttttatcata ttccatatct tgcaaagaat aaagcagatc aaacccagct
    14881 gtccaaaaag ttacacctaa acataaaata acgctataaa tgtgaatttc acccataatt
    14941 ataacacttc ctgcaatagg cgcaagtcct aaacaaaatc ccaaaactaa atgcgctaaa
    15001 gaactaaagc gcttaaaagc tgaataaata gccaatacaa aaagcacagg aaaagacaaa
    15061 taaaaggcca aggtattaat aaaataagaa catgatataa aaataagtgc attaataata
    15121 ataaaaatcc atacgctttt tctacctatt tttccactga cattagggcg atttgcacaa
    15181 cgaggattat ccttatctat atcttcatcc attaaacgat ttgtagccat ggcaaaattt
    15241 cttgcactta ccgcacaaat aatacctaaa atcaatgcct taaaaccaaa ccaagcagtg
    15301 tcatttgcaa gttttgatgc tacaatcata gaggaaaata aaaaaggcaa agcaaaaata
    15361 gaatgcttaa atactacaag ttctaaaata tctttaaatt ttatccagaa tgtgttcatt
    15421 tttctacttt aaaatatttt ttgctatgat tttactaaaa tttttataaa ttttaggata
    15481 aatattaaaa tgttttttga aatagcatta ataggaacaa ccgcgagtgg aaaaacatac
    15541 atagccaata ctttagcaag agaatttgat gctgttgttt taagtcttga tagtctttgt
    15601 gtttataaag agattaatat agcaagtgcc aagccttcac aagatgatct tgcgagtata
    15661 aaatactttg gggtaaattt attgagcgtg aatgaacatt ttaatgttga gttattcata
    15721 agagaatatc aaaaagcaaa agaatttgct ttagctagaa atttacctct aattatagta
    15781 ggtggaactg gattttattt aaaaactatg atagatggtt taagtgaaaa aaccttagag
    15841 tcaaagagtt ctttaaataa cgatgaaatt tatgctcttt tattaaatat tgatccaaac
    15901 tataaaatag aaaaaaatga tacttataga ttaaaaaaat ggctgggtat ttatgaacaa
    15961 acaagagaaa ttcctagtga atttttaaaa agaacacaaa aaactggggt gcttaaagat
    16021 atagaaattt atgagcttgc atgggataaa gaaattttaa aaaaacgtat taaaactaga
    16081 acaaaagaaa tgcttgataa tggactttta gatgaagcaa aaattctttt ttctaaattt
    16141 gatcataaac ttaaagcatt aaattctata ggtttgaaag agtgtaaaga atatttagat
    16201 ggagaaattt cctttaaaga gcttgaaaat ttaatcacga tacatactac acaacttgcc
    16261 aaaagacaaa gaacttttaa taaaaaattt caaagtaaag ccttggaatt tgataaagct
    16321 ttagctattt taagaatgaa attttcaatc gaaaaataaa tgttctatta gaatttttac
    16381 tcctaatata attaaaacca atccgcctaa aagttcagct ttatttttaa gataaattcc
    16441 aaatttattt cctattttta gagcaatgat gcataaaatg aaggtgataa tacctattaa
    16501 aaatatagct aataataaat ttacatttaa aaatgcaaaa ctcacaccaa ctgctagtgc
    16561 atcgatactc gtagcaattg ctaaagctag catggtttta aagccaaatt gattggcatt
    16621 actatcgcaa ttttcatttt ccaatgactc tttgatcatt tttaatccta ttaaagaaag
    16681 taaaataaaa gctatccaat gatcaatact cgcaataaaa gatgcaaaag ttatgcctat
    16741 aaaataacca atagttggca tcaaggcttg aaatccacca aaataaattc caacaataag
    16801 ataatgtttt aaatgtagtt ttttaacact aaaacctttg catagtgata cagcaaaagc
    16861 atccattcct aaagcacagg ataaaaaaat aagactataa aaatccataa taaatcctaa
    16921 aattttataa aaaattgaag atgaaattat aatcaaacaa agataaa
//
LOCUS       DAPWGO010000030        16804 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.031, whole genome shotgun sequence.
ACCESSION   DAPWGO010000030 DAPWGO010000000
VERSION     DAPWGO010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16804)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16804)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16804
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.031"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            61..708
                     /locus_tag="RJ336_000885"
     CDS             61..708
                     /locus_tag="RJ336_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDZ5213342.1"
                     /translation="MKKGIFLLVFLSVFFNACSTKNDEGLYNLSASEWYKQIIKDLQD
                     KDLEKADDHYNGMASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSR
                     NADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTKFN
                     LAVFYLNSTIENLYQRIGHDESAQIYKQRLQESEFYQQSIIKPELPWYRSIFERF"
     gene            725..3100
                     /gene="lon"
                     /locus_tag="RJ336_000886"
     CDS             725..3100
                     /gene="lon"
                     /locus_tag="RJ336_000886"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDZ5213343.1"
                     /translation="MQIEEIQNYPANLPVLVEDELFLYPFMITPIFINDSSNMKALDL
                     AIKNDSMLFVAPSRLENGRNFDEIYNCGVIGTIMRKVPLPDGRVKILFQGYAKGKIIE
                     QISNKPLEAKIELIKEDFLEGTKKEALLEVLKEKVKNLANISHYFSPDLLRTIEEGFD
                     ASRICDLILNTVRIKKQVAYEFFVLTDLEQKLVKLIDLIAQEIEANKIQKEIKNKVHS
                     RIDKVNKEYFLKEQLRQIQKELGSDTQKEDEVREYQKRLELKKKFMHEDAYKEIKKQI
                     EKFERIHQDNSEASMIQTYIETALDIPFEKISKKKLDIKEVSKQLNHDHYALNKPKER
                     IEEYFAVRELLEKRKIAEKDGAKVILCLYGPPGVGKTSLANSVSKALKRELIRIALGG
                     LEDVNELRGHRRTYIGAMPGRITQGLIEAKQINPVIVLDEIDKLNRSFRGDPSAVLLE
                     ILDPEQNSKFRDYYLNFNIDLSKVIFIATANDISNIPAPLRDRMEFIELSSYTPSEKF
                     HIMKKYLIPDELKKHGLKSNELSIDDETIELIISDYTRESGVRNLRRKVAELCRKSAK
                     KLLLENIKKVIINTKNLNEFLDKKVFEIEKNNGENQVGQVNGLAWTSVGGDVLKVEAV
                     KIKGKGELTLTGSLGDVMKESARIAFSMIKVLIDEGKIKIPKKIIIDPKVNVYDSYNI
                     HIHVPDGATPKDGPSAGITISTAIASIFSDKKVKADVAMTGEIDLKGKVLPIGGLKEK
                     LIAAYKADIKTALIPRKNYERDLKDIPSEVRDNMEIIAVDTFSDVLEYTLV"
     gene            complement(3161..3421)
                     /gene="rpsR"
                     /locus_tag="RJ336_000887"
     CDS             complement(3161..3421)
                     /gene="rpsR"
                     /locus_tag="RJ336_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDZ5213344.1"
                     /translation="MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRR
                     LTGTSKKYQEMVEVAIKRARHVALIPYIVDRKEVVNNPFEGL"
     gene            complement(3432..3983)
                     /locus_tag="RJ336_000888"
     CDS             complement(3432..3983)
                     /locus_tag="RJ336_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDZ5213345.1"
                     /translation="MFNKVVLVGNLTRDIEMRYAQSGSAIGASAIAVTRRFTTNGEKR
                     EETCFIDISFYGRTAEVANQYLTKGSKVLIEGRLRFEQWSDQNGQNRSKHSIQVENME
                     MLGGNSNAPQQGGIGNNSFSNNNYSGNYENQSYDPYMSENQNFNKAKANPAPQRNQNP
                     QHEEKLKEIDIDAYDSDDTNLPF"
     gene            complement(3992..4369)
                     /locus_tag="RJ336_000889"
     CDS             complement(3992..4369)
                     /locus_tag="RJ336_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDZ5213346.1"
                     /translation="MKHYEVLFILKPTLTEEEVNAKLEFVKEVLTKNGAEIETVVPMG
                     TRKLAYKIKKYERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAW
                     EKLSHGIKQSKKEIKPLDAPEIQ"
     gene            complement(4456..5322)
                     /locus_tag="RJ336_000890"
     CDS             complement(4456..5322)
                     /locus_tag="RJ336_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK family antimicrobial peptide resistance
                     protein"
                     /protein_id="HDZ5213347.1"
                     /translation="MNKKFSYPIPNFTDRRKSIIFWRYLRFQARKILYFPQVRLLEKT
                     LNKEKNKHLKDFFSQRPYACYNATRRFCDKSFKANERVKTLIYDVDKGLACFKFLPEE
                     QIIFSFDEDFELFLGYNYNVCEEGFWAFSLKFKKYTILQCNFCFTLENNLLLSCIQGH
                     KYKDFNILEINKILTKKCHGLRPVALLIECSKMLCEILKLQTTLGVHEKNQIRSQKGK
                     EKGYFVDYQKIWLENGGELIKINKHKYYKLHHSQKNLEEIPSQKRSMYKKRFAMLEEI
                     KTNLDKTLSIQD"
     gene            complement(5315..6421)
                     /gene="rseP"
                     /locus_tag="RJ336_000891"
     CDS             complement(5315..6421)
                     /gene="rseP"
                     /locus_tag="RJ336_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDZ5213348.1"
                     /translation="MRSLLFLIVILILGIKFYSIEFLATVLVISFLIFFHELGHFLAA
                     RSLGVKVEVFSIGFGKSLIEREFKGTNYRLSTLPLGGYVKLKGQDDMRPGFENLDKDS
                     YSILSPLKKIYILFAGPFFNLILAFFLYIIIGNLGLNKLAPQIGNIAPNSAAQEIGLQ
                     KNDTILEINGIRIQTFDEISKHLSLDPLKILINREGKNLEFILTPKIGQGYNDFGQIV
                     EKPQLGVSPNGTSTLVKHQGLESFKYAAQESFQASTLIIKGIVKLISGEVEAKNLGGI
                     ITMTEITSKAAQNSFTLLLFITALISINLGILNLLPIPMLDGGHILFNLYEMIFRRKV
                     PQRTFEYLSYTGMAILLSLMLFATYNDISRIIGE"
     gene            complement(6418..6954)
                     /gene="pgsA"
                     /locus_tag="RJ336_000892"
     CDS             complement(6418..6954)
                     /gene="pgsA"
                     /locus_tag="RJ336_000892"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDZ5213349.1"
                     /translation="MNLPNILAIFRMVLAPLLFFLLIHHFENIHQSWINYFAALTFSL
                     AALSDFFDGYIARTWKQTTKLGGILDPLADKMLVLAAFLGLLLTGKANEWVIYIILVR
                     EFFITGFRVVMISENLNVNASFAGKLKTAFQMTAIGFLIMEWIGGEILLYIALILTLY
                     SGFEYIYTYIKAQKKGEK"
     gene            complement(7079..7684)
                     /locus_tag="RJ336_000893"
     CDS             complement(7079..7684)
                     /locus_tag="RJ336_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDZ5213350.1"
                     /translation="MKKELEIFSTRYSCRNFKNEKLKKEDLNSILEIARLSPSSLGLE
                     PWKFIVVQDEKRKEELSKICNQQKHVKDCAALIIIISRLDFLDYFEEKLRKRDMSETE
                     IQKRLDAYMPFLKSLNQEEKISYAREQAHIALASILYSANALNIASCTIGGFDKQKLN
                     SYLSLDIQKERSSLVVALGYCNDEKNPQKNRFSFDEVVKFI"
     gene            complement(7684..8304)
                     /locus_tag="RJ336_000894"
     CDS             complement(7684..8304)
                     /locus_tag="RJ336_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDZ5213351.1"
                     /translation="MNFKELISKRRACKLFNDKKINEKDLHFILESGVLAPSSHGFEP
                     WKFVVLEQKEHNLKLSTLCYNQQNVASASHNIIFLARKDLQSKDEFAQKQVRRFSGSS
                     EENFQKILKIYTHKTNAMNDNELYHYAQLQCYLAMMQMSLAAMSLGIDSCMIGGFEKA
                     RVDNFLHLTYPFETAVILSLGYKAHEPKYSTQCLNFNEVVEFYKEK"
     gene            complement(8369..8794)
                     /locus_tag="RJ336_000895"
     CDS             complement(8369..8794)
                     /locus_tag="RJ336_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDZ5213352.1"
                     /translation="MKEIKLKEDLEKIYPLIKQLRNNLSLKDFLDKIQLATQTQHYKL
                     FAYENEGSYKAACGVMPFNVLYHNHCLYICDFVVDEALRGKGIGQAFLKKIQIWAKDQ
                     GYEELELSSSFFRTQAHEFYIQKMGFEKSGFVFKKNIKL"
     gene            complement(8806..9894)
                     /locus_tag="RJ336_000896"
     CDS             complement(8806..9894)
                     /locus_tag="RJ336_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HDZ5213353.1"
                     /translation="MKHLLYLIGDELTINEKFKNYIYRTYEEKFKEINEIRIQNKTDK
                     DLPFLLENLLNQYDFITLFTSPLHYATVAKILATLNDDNLILKDDTLVPDKAEFSKNS
                     FVCNFSNSKINVVKINPSEKLPNLLGHIKLNFAYFCIFGMDDESAILLLQTLTKSYEI
                     SIKSTKLLDNLVLIKATCANFGKLDGFLNSVKNLFGQKVFLGKDPIHFISSKLLEKKL
                     KISFAESCTGGLCASTLTKISGVSEIFEGSIISYSNRIKHEWLGISESVLENNGEYSE
                     RCVYFMLKGIFKTANPDFALAISGVVGEKDEGKIKSGTIYIGAMFRDGTFIQETLYLD
                     GDREFMQEQAVLATFCLLLKLKPEIFEI"
     gene            9993..12746
                     /gene="ileS"
                     /locus_tag="RJ336_000897"
     CDS             9993..12746
                     /gene="ileS"
                     /locus_tag="RJ336_000897"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDZ5213354.1"
                     /translation="MDYKETLLLPSTTFAMRANLAELEPQRFKKWFEQNYAYEKMKEN
                     RKNAKKSFTLHDGPPYANGHIHIGHALNKILKETIIKTHYFKGESVRFTPGWDCHGLP
                     IEQQVEVKLGEKKKSLSKKEIREFCRQHASEFVDIQREEFKNLGIIADWDKPYLTMKF
                     EFEAAIYRTLCEIAKKGLLCERSKPVFWSWAAKSALAEAEVEYQDKEDYSIFVAFDLD
                     VKACEKLGVSKASAVIWTTTPWTLVANQAIALNPNENYVITKEGLIFASALLKSMVEK
                     GLTSGEIQKELNAKEFEKLEAINPLNGRKSVLIMGEHVLMDGGSGLVHTAPGHGEDDY
                     YACLKYGIEVLMPVDDGGCYDETLRAKELLPSHLLEEFIGLHIFKANEKILELLGEKL
                     LHSSKFIHSYPFCWRTHKPVIYRATKQWFILMDEPKLQGKTLRECAKEQLLKTTFYPQ
                     SGVKRIGSMVENRPDWCISRQRDWGTPIAFFRDKNTKEVIFDDELFDFVAAIFEKHGA
                     DAWWEFEIKDLIPTNSKYKAENLEKVYDILDVWFDSGSTFNAVLNSGLYDAGEKRASM
                     YLEGSDQHRGWFQSSLLVGTAINESAPYESILTHGFTTDEKGQKMSKSKGNVIAPEYV
                     AKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQYRKIRNTIRFLLANTNDLKDLEV
                     KEFSFIDKWILSRATKVFKASKEAFFAYEFAKGFSLLLNFLSADLSGIYLDISKDRLY
                     CDSENAQRRKSAQVAMALIAKELLNLLAPNLSYSVDEALEHANVLIKGDAKDVFDLSL
                     TQDFDYDFGIDDTFLMSAREKFFEQIDILKKDKIIKSTLELNLNISFNKFPNEELADW
                     FMVSQISNENEEILAEFEVENEKFKITKASLCKCPRCWKLQSKDEETPCLRCEEVLKG
                     IQC"
     gene            12740..12850
                     /locus_tag="RJ336_000898"
     CDS             12740..12850
                     /locus_tag="RJ336_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213355.1"
                     /translation="MLENPIPNSIIITTIAVVLAFSALAVFLIKKTKENK"
     gene            12847..14208
                     /gene="gatA"
                     /locus_tag="RJ336_000899"
     CDS             12847..14208
                     /gene="gatA"
                     /locus_tag="RJ336_000899"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HDZ5213356.1"
                     /translation="MITLKEALKYSKEELENLKKELNEKAKKEKKIGAYIEQFLDKDL
                     SVSGEGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMD
                     EFAMGSSTASSYYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPA
                     AFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSA
                     NIEFIKTAPNLNANKKLKIAVIENYVNDADSEVKNALLKTIDMLKANGHEIVYKNLLD
                     SKFDIAAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRI
                     LLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDTQKSP
                     MQTYLEDVYTISVNLAGLGGISVPVAKDKEELNISAQLICKAYDEQTLLDGALSLEQM
                     IKH"
     gene            14218..15675
                     /gene="guaB"
                     /locus_tag="RJ336_000900"
     CDS             14218..15675
                     /gene="guaB"
                     /locus_tag="RJ336_000900"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDZ5213357.1"
                     /translation="MKIVKRALTFEDVLLRPGYSEVLPKEVKIHTKLTKNITLNMPLI
                     SAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSESGVIIDPIFVSPK
                     ASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLRFESDFSNLVENVMTKMPLITA
                     PKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKKRKEYPDANKDNFGRLRV
                     GAAIGVGQMDRVDALVEAGVDVVVLDSAHGHSKGIIDTVKAIKAKYPNLDLIAGNIAT
                     AAAAKALCEAGVDAVKVGIGPGSICTTRIVSGVGVPQISAIDECVEEANKFGVPVIAD
                     GGIKYSGDIAKALAVGASSVMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSLGAMQK
                     GSSDRYFQQGTAQDKLVPEGIEGRVPYVGSIRSVVHQLLGGLRSSMGYVGAKDIEDFQ
                     KRAEFVEITTAGLKESHVHDVTITHEAPNYKVNHQ"
     gene            15672..15845
                     /gene="xseB"
                     /locus_tag="RJ336_000901"
     CDS             15672..15845
                     /gene="xseB"
                     /locus_tag="RJ336_000901"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDZ5213358.1"
                     /translation="MSFEENLKHANESLEKLNNQELALDESVKIYKEGLESIKKARLE
                     LEKAKLEVEQIDE"
     gene            15838..16614
                     /locus_tag="RJ336_000902"
     CDS             15838..16614
                     /locus_tag="RJ336_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HDZ5213359.1"
                     /translation="MSKIAALQFPTLALSESRLDYYLKASKDNGVNLVVLGEYVINSF
                     FTELLHMPKNMIKEQSEAKKESLIKLAKKYELEIIAPYVSVEAKSYKKLCLKVTPNGV
                     KSYEQQILMPYEHWNEEKFFSNKTPSELKIFTFNYEKLKCALLFGFETHFDIFWQQIM
                     AKKIDLVIVPSACTFESKQRWEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTLFI
                     NAFGEIESKLGSEEEMLIIEPKKSDEARKLWGFDKILKNF"
     gene            16626..>16804
                     /locus_tag="RJ336_000903"
     CDS             16626..>16804
                     /locus_tag="RJ336_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213360.1"
                     /translation="MRKILLQIFIFSVLFIVTFTINRVLMQNSFIPTGLISDKNEIFL
                     MYLLGVFHDIRFLSAA"
BASE COUNT         5910 a         2293 c         2929 g         5672 t
ORIGIN      
        1 agaacataat tataaaatcg ttaaaatata gatttttgag aatataaatc aaggtgaagt
       61 atgaaaaaag gtattttttt attggttttt ttaagtgttt tttttaatgc gtgtagtacg
      121 aaaaatgatg aaggtttata caatcttagt gctagtgagt ggtataagca aattattaaa
      181 gatttacagg acaaggattt ggaaaaagcc gatgatcatt ataatggtat ggcaagtgag
      241 cacgttgccg atcctttatt ggaaactact ttaattattt tagcacaagc tcatatggat
      301 gaagaggaat ataagttagc tgaattttat ttagatgaat ataataaaaa atttggaaat
      361 tcacgcaatg ctgattatat tcgttatctt aaaattaaag caaaatttga tgcatttgca
      421 gtgccaaatc gtaatcaggc tttaatgctt gaaagccaaa aagaaataga tacttttttg
      481 aaagattatc cttatacaga atatgaacct ttggttcaaa caatgcttac aaaatttaat
      541 ttagcggttt tttatcttaa tagtactata gaaaatctat accagcgcat agggcatgat
      601 gaaagtgcgc aaatttataa acaaagactt caagaaagtg aattttatca gcaaagtatt
      661 atcaaacctg agcttccttg gtatagaagt atatttgaaa gattttaata aacaaggaaa
      721 ataaatgcag attgaagaga tacaaaatta tccagcaaat ttaccagtat tggttgaaga
      781 tgaattattt ttatatcctt ttatgataac tcctattttt attaacgatt catccaatat
      841 gaaagcttta gatcttgcga ttaaaaatga tagtatgctt tttgttgcgc cttcaaggtt
      901 ggaaaatgga agaaattttg atgaaattta taattgtgga gtgattggga ctatcatgcg
      961 aaaagttcct ttacctgatg gaagggtgaa aatacttttt caaggatatg ctaagggtaa
     1021 aattatagag caaatttcta ataaaccttt agaagccaag atagaactta taaaagaaga
     1081 ctttttagaa ggaactaaaa aagaagcgct tcttgaagtt ttaaaagaga aggtaaaaaa
     1141 tttggcaaat attagtcatt atttttctcc ggatctttta agaacaattg aagaaggttt
     1201 tgatgcgtct aggatttgtg atttgatttt aaatactgtg cgtattaaaa aacaagttgc
     1261 ttatgagttt tttgttttaa cagatcttga gcaaaaatta gtaaaattaa tagatttaat
     1321 tgcccaagaa atagaagcca ataaaattca aaaagaaatt aaaaataaag tgcattctcg
     1381 tattgataag gtaaataaag aatatttttt aaaagaacaa ttaagacaaa ttcaaaaaga
     1441 gcttggttct gacacacaaa aagaagatga ggttagagaa tatcaaaagc gtctggagtt
     1501 aaagaagaaa tttatgcacg aagacgctta taaagaaatc aaaaaacaaa ttgaaaaatt
     1561 cgaacgcatt catcaagata attccgaagc atcgatgatt caaacttaca tagaaacagc
     1621 attagatatt ccttttgaaa aaatttctaa gaaaaaactt gatattaaag aagtttcaaa
     1681 acagctcaac catgatcatt atgcattaaa taaaccaaaa gaacgcatag aagaatattt
     1741 tgcagttagg gaacttttag aaaaaagaaa aatagcagaa aaagatggtg ctaaagttat
     1801 actttgtctt tatggacctc ctggcgtggg taaaacttca ctggcaaatt ctgtttcaaa
     1861 agctttaaaa agagagctta ttcgcatagc cttaggcgga cttgaagatg ttaatgagct
     1921 acgtggtcat cgtagaactt atataggcgc tatgcctgga cgtattaccc aaggactcat
     1981 agaggcaaaa caaattaatc ctgtaattgt attggatgaa attgataaat taaatcgcag
     2041 ttttagaggc gatccaagtg cggtgctttt agaaatttta gatccagagc aaaattctaa
     2101 atttagggat tattatttaa attttaatat tgatttaagt aaagtcattt ttatagcaac
     2161 ggcaaatgat attagcaata ttcctgcacc tttaagagat agaatggaat ttatagaact
     2221 tagctcttat actccaagtg aaaaatttca tataatgaaa aaatatttaa ttccagatga
     2281 gcttaaaaaa catggcttaa aatccaatga attatctatt gatgatgaaa ctatagagtt
     2341 aatcattagt gattatactc gtgaatcagg ggttagaaat ttgcgtcgca aagtggcaga
     2401 gttgtgtcgt aagagtgcta aaaaactact tttagaaaat attaaaaaag tcattattaa
     2461 tacaaaaaat ttgaatgaat ttttagataa aaaagttttt gaaatagaaa aaaataatgg
     2521 agaaaatcaa gtaggtcagg ttaatggttt ggcttggaca agtgtaggtg gagatgtttt
     2581 aaaagtagag gctgtaaaaa ttaaaggtaa aggagaatta acgctcacgg gaagtttggg
     2641 tgatgtaatg aaagaatcag ctagaattgc ttttagcatg ataaaagttt taatcgatga
     2701 aggaaaaata aaaataccta aaaaaataat tatcgatcct aaagttaatg tttatgatag
     2761 ttataatatt catatccatg tgccagatgg agctactcca aaagatggcc caagtgcagg
     2821 cattacgata agcacagcta ttgcttctat ttttagtgat aaaaaggtta aagcagatgt
     2881 tgcaatgaca ggtgaaatag atttaaaagg aaaagtttta ccaataggtg gattaaaaga
     2941 aaaattaatt gcagcttata aagcagatat aaaaacagct ttaatcccaa gaaaaaatta
     3001 cgaaagggat ttaaaagata ttcctagtga ggttagagac aatatggaaa tcattgctgt
     3061 tgatactttt agtgatgtct tagaatatac tttggtttaa ttttattttg agaataaatg
     3121 tataagaaag caaacttttt acaagtttgc ttttaaaaga ttatagtcct tcaaaaggat
     3181 tattgactac ttcttttcta tccactatat aagggataag agctacatgt cttgcacgtt
     3241 tgattgcaac ttctaccatt tcttggtatt ttttgcttgt acctgttaaa cggcgtggca
     3301 tgattttaaa tctttcagat aaagcatgtt ttaacattgc tgtatcttta taatcaataa
     3361 attcaacttt tgcttcagtg tatttgcaat atttgcgaga gtattttctt ttttctgcca
     3421 tagtttatcc tttaaaatgg taaattagta tcatcgctat cataagcatc gatatcaatt
     3481 tcttttaatt tttcttcgtg ttgtgggttt tggtttcttt gtggagcagg gtttgctttt
     3541 gctttattaa aattttgatt ttcactcata taaggatcat agctttgatt ttcatagttt
     3601 ccactataat tgttgtttga aaagctatta ttgccaattc caccttgttg tggagcattg
     3661 gaattgccgc caagcatttc catattttca acttgaatgc tatgtttaga gcgattttgt
     3721 ccattttgat cgctccattg ttcaaatctc aaacgtcctt ctatgagtac ttttgaacct
     3781 tttgtaaggt attggtttgc aacttctgcg gtgcgaccat aaaagcttat atcaataaag
     3841 caagtttcct ctcttttttc tccatttgtg gtaaatcttc ttgttactgc gatagcagaa
     3901 gctccaatag cactaccgct ttgcgcataa cgcatttcta tatcacgtgt aagatttcca
     3961 accaaaacaa ctttgttaaa catctttttc cttattgaat ttcaggagca tctaaaggtt
     4021 tgatttcttt tttagattgc ttaatcccgt ggcttagttt ttcccaagct gcaatttctt
     4081 ttttgttttc atattttacg attaaaaatc ttattacttc ttcagtgatt cttaacaccc
     4141 tttcaagctc agcgatcaag tttgtaggag ctttgaaata aatcacaaaa taagttcctc
     4201 tttcgtattt tttgatttta tacgctaatt ttctagtgcc cattggaaca acagtttcaa
     4261 tttctgcacc atttttggtt aggacttctt taacgaattc caacttcgca ttcacttcct
     4321 cttcggtaag tgttggtttt aagataaata aaacctcata atgtttcatc ttttctcctt
     4381 atggatatta aagcccattt ttatgagcaa ggattttgca taaagcaaga ctagattata
     4441 tcaaaatata cttaattagt cttgaatact taaggtttta tctaaatttg ttttgatttc
     4501 ttcaagcata gcaaaacgtt ttttatacat ggagcgtttt tgcgaaggga tttcttctag
     4561 gtttttttga gagtggtgga gtttatagta tttgtgttta ttgattttta ttaattctcc
     4621 accattttct agccaaattt tttgataatc tacaaaatag cctttttctt ttcctttttg
     4681 agaacggatt tgattttttt catgtacacc taaagtagtt tgaagtttta aaatttcaca
     4741 aagcatctta gagcattcta taagtaaagc aacagggcgc aaaccatgac attttttagt
     4801 taaaatttta ttaatttcta aaatattaaa atctttgtat ttatgtcctt gtatacaaga
     4861 aagtagaaga ttgttttcta aagtaaagca aaaattacat tgtaagattg tgtatttttt
     4921 aaattttaaa gaaaaagccc aaaaaccttc ttcgcaaaca ttatagttat atcctaaaaa
     4981 aagctcaaaa tcttcatcaa aagaaaaaat tatttgttcc tcgggaagaa atttaaaaca
     5041 agcgagtccc ttatcaacat cataaataag tgttttaaca cgttcatttg ctttaaaact
     5101 tttatcgcaa aatcttcttg tagcattgta acaagcatag ggtctttgag agaaaaagtc
     5161 ttttaaatgt ttattttttt ctttattaag tgttttttct agaagtctta cttgaggaaa
     5221 atataaaatt tttcttgctt gaaaacgcaa atagcgccaa aagattatac tttttcttct
     5281 atcagtaaaa tttggaatag ggtaggaaaa ttttttattc acctataatc cttgatatat
     5341 cattataagt tgcaaagagc attaaactta aaagtattgc catgcctgta tagcttaaat
     5401 attcaaaagt acgctgtgga actttgcgtc taaaaatcat ttcataaaga ttaaaaagta
     5461 tatgtcctcc atcaagcata ggaataggta aaagatttaa aatgcctaaa tttatagaaa
     5521 ttaaagcagt gataaataaa agcaaagtaa agctattttg tgcagccttt gaggtaattt
     5581 cagtcatggt gataataccg cctaaatttt ttgcttcaac ttcaccactt atgagtttta
     5641 caataccctt gatgatgagt gtagaagctt gaaaactttc ttgtgcggca tatttaaaac
     5701 tttctaaacc ttggtgtttt acaagagtgc ttgtcccatt tggactgact ccaagttgag
     5761 gtttttcaac gatttgtcca aagtcattgt atccttgtcc tatttttgga gttaaaataa
     5821 attctaaatt ttttccttct ctattgatta atattttcaa aggatctaaa cttaaatgct
     5881 ttgaaatttc atcaaaggtt tgaattctta taccgttaat ttctaagata gtatcatttt
     5941 tttgaagtcc tatttcttgt gcagcagagt ttggcgctat gtttcctatt tgcggagcaa
     6001 gtttgtttag acctaaattt cctatgataa tataaagaaa aaaagctaaa attagattaa
     6061 aaaatggtcc agcaaaaaga atataaatct tttttaaagg acttaaaatg ctatagctat
     6121 ctttgtctag attttcaaaa ccaggacgca tatcatcttg tcctttaagt ttaacatatc
     6181 ctccaagtgg taaagtgctt aagcgatagt ttgtgccttt aaattcacgc tctataagac
     6241 tttttccaaa tcctatacta aaaacttcaa cttttacacc caaagatctt gcagccaaaa
     6301 aatgtcctaa ttcgtgaaag aaaattaaaa atgagatgac taaaacagtt gctaaaaatt
     6361 caatagaata aaatttaatt cccaaaatca aaataacaat taaaaataat aaagatctca
     6421 tttttctcct tttttttgag cttttatata agtatagatg tattcaaatc cagaataaag
     6481 agttaaaatc aaagctatgt aaagtagaat ttcaccgcct atccactcca tgattaaaaa
     6541 tcctatcgca gtcatttgaa aagcggtttt aagtttgcct gcaaaagaag cattgacatt
     6601 taaattttcg ctaatcatta caactctaaa acctgtgata aaaaattccc ttactaatat
     6661 aatataaatt acccattcat tagcttttcc tgtaagtaaa agccctaaaa aagctgctaa
     6721 aacaagcatt ttatcggcta atggatctaa gattccaccc agttttgtag tttgtttcca
     6781 agttcttgcg atgtatccat caaaaaaatc acttaaagct gctaatgaaa aagttaaagc
     6841 agcaaaatag ttaatccaac tttgatgaat attttcaaaa tgatgaatta ataaaaaaaa
     6901 tagcaaaggc gctaaaacca ttctaaaaat cgccaagata ttgggtaaat tcataacaag
     6961 ccttgtgaaa ttaaatgtaa aattataatc aaaattgtat aaaatttaag caaagactta
     7021 gtaaaaatac aaaaaagaat cagtttattt ttatttaaat tttgcttaaa agcaaaattt
     7081 aaataaattt tacaacttca tcaaaactaa aacgattttt ttgaggattt ttttcatcgt
     7141 tgcaatatcc taaagccacc accaaacttg atctttcttt ttgaatatca agtgataaat
     7201 aagaattaag cttttgttta tcaaaaccac ctatagtgca gcttgctata tttaaagcat
     7261 tagcactgta aagtatgcta gctagagcta tatgagcttg ttctcttgca taagatattt
     7321 tttcttcttg atttagagat tttaaaaaag gcatataagc atctaagcgt ttttgaattt
     7381 ctgtttcact catatctctt tttctaagtt tttcttcaaa ataatccaaa aaatcaagtc
     7441 ttgaaatgat gataattaac gcagcgcaat cttttacatg tttttgctgg ttgcaaattt
     7501 tagaaagttc ttcttttctt ttctcatctt gcactactat aaatttccaa ggttccagtc
     7561 ctaaggagct tgggcttaat cttgctattt ctaaaataga atttaaatcc tcttttttga
     7621 gtttttcatt tttaaaattt ctacaagaat atcttgtact aaaaatttca agttcttttt
     7681 tcattatttt tccttgtaaa attcgacgac ttcattaaaa tttaagcatt gagtagaata
     7741 ttttggttca tgggctttat atcctaagga taaaattaca gcagtttcaa aaggataagt
     7801 taaatgaaga aaattatcaa ccctagcttt ttcaaagcca cctatcatac aagaatcaat
     7861 acctaagctc attgcagcta gcgacatttg catcatagca agatagcatt gaagttgtgc
     7921 gtaatgatag agttcattat cattcattgc attggtttta tgggtgtaaa tttttaaaat
     7981 tttttgaaaa ttttcttcgc tagaacctga gaaacgacgc acttgttttt gtgcaaattc
     8041 atctttgctt tgaagatctt ttcttgctag aaaaataata ttatgactcg cacttgctac
     8101 attttgttga ttgtaacata gagttgagag tttaagattg tgttcttttt gttctaatac
     8161 tacaaatttc caaggctcaa atccatgtga gcttggggct aagactccac tttctaagat
     8221 aaaatgcaaa tccttttcat tgattttttt atcattaaaa agtttacaag ctctgcgttt
     8281 tgaaattagt tctttaaaat tcattttatt ccttaaaatc aaaaaataat aatattaatt
     8341 ataaaatgca aagcttaatc aaaaaatatt atagtttgat atttttctta aaaacaaaac
     8401 cggatttttc aaaacccatt ttttggatat aaaattcatg agcttgtgtt ctaaaaaaac
     8461 ttgaacttag ttctaattct tcatatcctt gatcttttgc ccaaatttgg atttttttca
     8521 aaaaagcttg acctatacct tttcctctta aagcttcatc tacgacaaaa tcacaaatat
     8581 aaagacaatg attatgataa agtacattaa agggcatgac tccacaagct gctttgtagc
     8641 ttccctcatt ttcataggca aaaagtttat aatgttgagt ttgtgtagca agttggattt
     8701 tgtctaaaaa atctttcaaa gataggttat ttcttaattg ttttatcaag ggataaattt
     8761 tttccaagtc ttcttttagc ttaatttctt tcatttttaa atcccttaaa tttcaaaaat
     8821 ctcaggtttt aattttaaaa gtaggcaaaa agttgccaaa acagcttgtt cttgcataaa
     8881 ttcacgatct ccatctaaat aaagcgtttc ttggataaaa gttccatctc taaacattgc
     8941 acctatataa atagtgcctg attttatttt tccctcatct ttttcgccaa ctactccgct
     9001 aatagctaag gcaaaatcag gattagctgt tttaaaaata ccttttagca taaaataaac
     9061 acaacgttca ctgtattcgc cattattttc taagacgctt tcgctaattc caagccattc
     9121 gtgtttgatg cggttggaat aacttataat agatccttca aaaatttcac ttacacctga
     9181 aattttggtt aaggtgcttg cacaaagtcc acctgtgcaa ctttcagcaa aagaaatttt
     9241 taattttttt tctaaaagtt tagagcttat aaaatgtata ggatctttac ctaaaaatac
     9301 cttttgtcca aaaagatttt ttacgctatt taaaaaacca tcaagttttc caaaattagc
     9361 gcaagtggcc ttaataagca caagattatc taaaagcttg gttgatttta tacttatctc
     9421 ataagatttt gttagggttt gcagtagcaa tatagcgctt tcatcatcca tgccaaaaat
     9481 gcaaaaatat gcaaaattta attttatatg cccaagaaga ttgggtaatt tttcgcttgg
     9541 atttatttta acgacattga tttttgaatt tgaaaaatta cacacaaagc tatttttact
     9601 aaattctgct ttatctggaa ccaaggtatc atcttttaag ataagattat catcatttaa
     9661 agttgctaaa attttagcaa cagtcgcata atgcaaaggg cttgtaaata aagtgataaa
     9721 atcatactga tttaagagat tttcaagcaa aaagggtaaa tctttatcgg ttttattttg
     9781 tatgcgaatt tcgttgattt ctttaaattt ttcttcataa gttctataaa tataattttt
     9841 gaatttttcg tttatagtaa gctcatctcc tataagataa agcaaatgtt tcataaattt
     9901 tccttttttt cttataatta tagccaaaaa caaagtagaa attaaagcta atttgagtag
     9961 aatttaagat tattaaaaat taggtggaaa aaatggacta caaagaaact ctacttttgc
    10021 ccagcactac ttttgctatg cgggcgaatt tagcggaact tgaaccgcaa agatttaaaa
    10081 aatggtttga gcaaaattat gcttatgaaa aaatgaaaga aaatcgcaaa aatgcgaaaa
    10141 aaagttttac cttacacgat ggcccccctt atgctaacgg acatatccat ataggacatg
    10201 ctttaaataa aattttaaaa gaaactatta tcaaaacgca ttattttaaa ggtgaaagtg
    10261 tgcgttttac tccagggtgg gattgtcatg gtttacctat agaacaacaa gtagaagtaa
    10321 agcttggaga aaagaaaaaa agcttaagca agaaagaaat tcgtgagttt tgcagacaac
    10381 atgcgagtga atttgtagat atccaaagag aagaatttaa aaatttaggc attattgcgg
    10441 attgggataa gccttatttg actatgaaat ttgagtttga agcagcgatt tatagaactt
    10501 tatgcgagat tgctaaaaaa ggcttacttt gtgagcgttc taaacctgtt ttttggagtt
    10561 gggcggcaaa gtcagcttta gcggaagctg aagtagagta tcaagataaa gaagattatt
    10621 ctatctttgt ggcttttgat ttagatgtaa aagcttgcga aaaattaggc gtttcaaaag
    10681 caagcgcagt gatatggaca actacgcctt ggactttggt ggctaatcaa gctatagctt
    10741 taaatcctaa tgaaaattat gtgatcacta aagaaggttt gatttttgca agtgctttac
    10801 ttaaaagtat ggtagaaaaa ggacttacaa gtggagaaat tcaaaaagaa ctcaacgcaa
    10861 aagaatttga aaaacttgaa gctatcaatc ctttaaatgg aagaaaatct gttttaatca
    10921 tgggtgagca tgtattgatg gatggtggaa gtgggcttgt gcatactgca ccaggacatg
    10981 gcgaagatga ttactatgct tgtttgaaat acggtattga agttttaatg cctgttgatg
    11041 atggtggatg ttatgatgaa actttaagag ctaaagagct tttgccttct catttgcttg
    11101 aagagtttat aggtcttcat atttttaagg ccaatgaaaa aattttagaa cttttaggcg
    11161 aaaaactttt acattcttct aaatttatac actcttatcc attttgttgg agaacgcata
    11221 agcctgtgat ttatagagct actaaacaat ggtttatttt aatggatgag ccaaaacttc
    11281 aaggaaaaac tttaagagag tgtgcaaaag aacaactttt aaaaacaacc ttttatccgc
    11341 aaagtggggt aaaaagaata ggttctatgg tggaaaatcg cccagattgg tgtatttcaa
    11401 gacaaaggga ctggggaacg cctatagcct tttttagaga taaaaacact aaagaagtca
    11461 tttttgatga tgagcttttt gactttgtag cggctatttt tgaaaaacac ggcgctgatg
    11521 cgtggtggga gtttgaaatc aaagatttaa ttcctacaaa ttcaaaatac aaagctgaaa
    11581 atttagaaaa agtatatgat atcttagatg tttggtttga tagcggaagt acttttaatg
    11641 cagttttaaa tagcggactt tatgacgcag gagaaaaaag agcaagtatg tatttagaag
    11701 gaagcgatca gcatcgtggt tggtttcaaa gctctttgct tgtaggtaca gcgatcaatg
    11761 aaagcgcacc ttatgaaagc attttaactc atggttttac caccgatgaa aaagggcaaa
    11821 aaatgtctaa atctaaaggc aatgtgatcg ctcctgaata tgtagcaaaa acctatggag
    11881 ttgaaatttt aagactttgg atacttttaa gtgattattc aagtgattta aaaatttcag
    11941 acaatatctt aaaacaagtg ggtgaacaat accgcaaaat aagaaacact ataagatttt
    12001 tacttgctaa taccaatgat ttaaaagatt tagaagttaa agaatttagt tttattgata
    12061 aatggatatt aagtcgtgca accaaagttt ttaaagcaag taaagaggca ttttttgctt
    12121 atgaatttgc taaaggtttt agtttgcttt taaatttttt aagtgcggat ttaagtggga
    12181 tttatcttga tatcagtaaa gataggcttt attgcgatag tgaaaatgcc caaagaagaa
    12241 aatccgctca agtggctatg gctttgatag caaaagagct tttaaattta cttgctccaa
    12301 atttaagcta tagtgtagat gaggctttag aacatgctaa tgttttaatc aaaggcgatg
    12361 caaaagatgt atttgatcta agtttaactc aggattttga ttatgatttt ggtatagatg
    12421 atacattttt aatgagtgct agagagaaat tttttgaaca gattgatata cttaaaaaag
    12481 ataaaatcat taaatctact ttggaattaa atttaaacat cagttttaat aaattcccaa
    12541 atgaggaatt agccgattgg tttatggtaa gtcaaatcag caatgaaaat gaagaaattt
    12601 tggctgaatt tgaagtagag aatgagaaat ttaaaatcac caaagcttca ctttgtaaat
    12661 gcccaagatg ttggaaactt caaagtaaag atgaagaaac accttgttta agatgtgaag
    12721 aagttttaaa agggattcaa tgctagaaaa tcctattcca aatagcatta tcatcacaac
    12781 tatagcggtg gttttggctt ttagtgcttt agcagtattt ttgatcaaaa aaacaaagga
    12841 aaataaatga taactttaaa agaagcttta aaatactcca aagaagaact tgaaaattta
    12901 aaaaaagaac tcaatgaaaa agcaaaaaaa gaaaaaaaaa taggtgctta tatcgaacaa
    12961 tttttagata aagacttaag tgtttcaggt gaaggtgtgc ctgtagctat aaaagataat
    13021 atcagcgtaa agggctggga gcttactagt gcgagtaaga ttttacaagg ttatatcgct
    13081 ccttatgatg caagtgtgat tgttaattta aaagctaatg gtttttctcc ttttgggcgt
    13141 tgcaatatgg atgaatttgc tatgggaagt tcaacagcga gttcttatta tggcaaaact
    13201 ttaaatcctt taaattttga gcgtgtgcca ggtggttcaa gtggtggaag tgctgctgcg
    13261 gtagcgggtg gcttggcttt ggcaagtttg ggttctgata caggaggatc tgtacgtcag
    13321 cctgcagctt tttgtggttg cgtaggattt aaaccgagtt atggaagagt gagtcgctat
    13381 ggcttagctt cttattcttc aagtttggat caaattgggg ttttaacgca aaatgtagaa
    13441 gatgcggcaa ttttatatga tgcgatcgca ggatatgata aaatggatag cacgagtgca
    13501 aatatcgagt ttatcaaaac cgctccaaat ttaaatgcaa ataaaaaatt aaaaattgca
    13561 gtgattgaaa attatgtcaa tgatgcagat agtgaagtaa aaaacgcact tttaaaaacc
    13621 atagatatgt taaaagctaa tggacatgag attgtatata aaaatttgct tgattctaag
    13681 tttgatatcg cagcgtatta tatcatcgca acagctgaag caagtgcaaa tttaagtcgt
    13741 tatgatgggg tgcgttatgg caagcgttct gaaaatatcc aaaatttaaa agaaatgtat
    13801 gtaaatacac gcagcgaagg ttttggagaa gaagtaaaaa gaagaatttt gttaggaact
    13861 tttgttttaa gcagtggata ttatgatgcg tattatatta aagcacaaaa agctagagct
    13921 tttattaagg caaaatatga agaaattttg caagattgtg atcttatttt tatgcctgta
    13981 acgcctacaa cggcttttaa atttgatact caaaaaagcc ctatgcaaac ttatttagaa
    14041 gatgtttata ctatctctgt aaatttagca ggacttggag gcattagtgt gcctgttgca
    14101 aaagataaag aagagcttaa tatatcagca caactgattt gcaaagctta tgatgaacaa
    14161 accttgttag atggggcttt aagtttagaa caaatgatta aacattaagg atgaaagatg
    14221 aaaattgtaa aaagagcttt aacttttgaa gatgtattat tgcgtcctgg gtattctgaa
    14281 gttttaccta aggaagtaaa aattcacact aaattaacaa aaaatatcac tttaaatatg
    14341 cctttaatct ctgcggctat ggatacagtt actgaacaca gggctgctat tatgatggca
    14401 agacttggag ggcttggagt gattcataaa aacatggata tagcctcaca ggttagagaa
    14461 gtaaaaagag tgaaaaaaag cgaaagcggg gtgattatcg atcctatttt tgtaagtcct
    14521 aaggcaagtg ttgcggaagc tttagaaatt atggcagagt atagaatttc aggtgttcct
    14581 gtagtagatg aagataagaa actaataggc atactcacca atcgtgattt aagatttgag
    14641 agtgattttt caaatttggt tgaaaatgtt atgactaaaa tgcctttaat cactgctcca
    14701 aagggttgta ctttagatga tgcggaaaaa attttcagta ccaacaaagt agaaaaactt
    14761 cctatagtgg atgaacaagg acgcttggaa ggacttatca ctataaaaga tcttaaaaaa
    14821 cgcaaagaat atcctgatgc caataaagat aattttggaa gattacgcgt gggtgcggct
    14881 ataggagtag ggcaaatgga tcgtgtggat gctttagttg aagcaggcgt tgatgttgtt
    14941 gtgcttgatt ctgcgcatgg gcattctaag ggtattattg atacagtaaa agcaattaag
    15001 gctaaatatc caaatttaga tcttatcgca ggaaatatcg ccactgcagc tgcagcaaaa
    15061 gcactttgtg aagcaggagt agatgcggtt aaagtaggta ttgggccagg aagtatttgt
    15121 actacacgta ttgtttcagg tgtgggcgtg cctcaaattt cagccattga tgaatgcgta
    15181 gaagaagcaa ataaatttgg cgttcctgtg atagccgatg gcgggatcaa atattcaggt
    15241 gatatcgcaa aagctttagc tgtgggtgcg agttctgtta tgataggatc tcttttagct
    15301 ggaacagatg aaagtccagg agagcttttt acttatcaag gaagacaata taagtcttat
    15361 cgtggtatgg gctcacttgg tgctatgcaa aagggaagtt cggatagata ttttcagcaa
    15421 ggtactgctc aagataaact cgttcctgaa ggtatagaag ggcgtgttcc ttatgtggga
    15481 agtataagaa gcgtggtgca tcaactttta ggaggtttgc gttcttctat gggttatgtt
    15541 ggggctaaag atatagaaga ttttcaaaaa agagccgaat ttgttgaaat taccactgca
    15601 ggacttaaag aaagtcacgt gcatgatgtt actatcactc atgaagcacc aaactacaag
    15661 gttaatcatc aatgagtttt gaagaaaatt taaaacacgc taatgaatct ttggaaaaat
    15721 taaataatca agagcttgcc ttagatgaaa gtgtaaaaat ttataaagaa ggtttagaga
    15781 gtatcaaaaa agcaagactt gagcttgaaa aagcaaaatt agaagtggag caaattgatg
    15841 agtaaaatag cagctttaca gtttccaact ttagctttaa gtgaatcaag gcttgattat
    15901 tatcttaaag cttcaaaaga caatggagta aatttagtag ttttgggaga atatgtgatc
    15961 aacagttttt ttacagaact tttgcatatg ccaaaaaata tgataaaaga acaaagcgaa
    16021 gctaaaaaag aaagcttgat taaacttgct aaaaaatacg aattagaaat catcgctcct
    16081 tatgtaagcg ttgaagctaa aagttataaa aaactttgct taaaagttac tccaaatggt
    16141 gtgaaaagtt atgaacagca aattttaatg ccttatgaac attggaatga agaaaaattt
    16201 ttcagcaaca aaactccatc agaattaaaa atttttactt ttaattatga aaaattaaaa
    16261 tgtgctttgc tttttggttt tgagacacat tttgatattt tttggcaaca gattatggcg
    16321 aaaaaaattg atttggttat cgttcctagt gcttgtacct ttgaaagcaa acaaagatgg
    16381 gaagaacttt taaaaacaag agctttttta aattctacaa gcattttaag agtaaatcgc
    16441 ataggcaaaa caaaagatga gtggaatttt tacggcgata ctttgtttat taatgctttt
    16501 ggtgagatag aaagtaaatt gggttctgaa gaagaaatgc ttattataga gcctaaaaaa
    16561 agtgatgaag caagaaaact ttggggtttt gataaaattc ttaagaattt ttaaagaagg
    16621 tgaatatgag aaaaatttta cttcaaattt ttatttttag tgtattattt atagtaactt
    16681 ttaccattaa tcgtgtttta atgcaaaatt cttttatccc tactggttta attagtgata
    16741 aaaatgaaat ctttttaatg tatcttttag gtgtttttca tgatataaga tttttaagcg
    16801 cagc
//
LOCUS       DAPWGO010000031        16583 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.032, whole genome shotgun sequence.
ACCESSION   DAPWGO010000031 DAPWGO010000000
VERSION     DAPWGO010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16583
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.032"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            94..1158
                     /gene="mqnE"
                     /locus_tag="RJ336_000904"
     CDS             94..1158
                     /gene="mqnE"
                     /locus_tag="RJ336_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HDZ5213361.1"
                     /translation="MKNLITKLENEERLNQEEANALWDLDLFTLGKYAHKKRTKLHGK
                     KVYFNINRHINPTNICADTCKFCAFSAHRKNPNPYLMTHEEIMKIVDETVKRETKEVH
                     IVSAHNKDTTWQWYLEIFKMIKEKYPNLHVKAMTAAEIDFLHRRFKMSYEEVIEKMLE
                     YGVDSMPGGGAEIFDEEVRKKICHGKVSSENWLKIHKLWHEKGKQSNATMLFGHIEER
                     HHRIDHMLRLRDLQDQTGGFNAFIPLVWQRDNSFIQTDKIMDSEEILKTIAIARLVLD
                     NIKNIKAYWATMTLNLAMVAQEFGANDLDGTIEKESIQSAGGAKSAKGTSLKTFIDMI
                     KTSNLIPVERDSLYNELKTY"
     gene            1168..2487
                     /locus_tag="RJ336_000905"
     CDS             1168..2487
                     /locus_tag="RJ336_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDZ5213362.1"
                     /translation="MDFFKLKENNTSFKTEVIAGLTTFLAMVYIIPVNSSIVGNTGMP
                     IEALITATALITIVASAFNAFFANTPVAMSVGMGLNAYFTFAVCLGQNIAWQSALGAV
                     FISSIIFLILSFTHFRLWVIRNIPKDLRLAICAGIGCFIAFLGLSQMGVIMHNKDTLV
                     SIGNFKSPHVLFGIFTLALIIFFWAIKLRGAFIFGVLVSSIIAWIFHLDNASFPVQIF
                     SLPNFSMENGLGAIFLQLDIKSALNITMIPIILTFFITQLFDSIGTITGVGERGKIFD
                     DPKNGEKKLSKTLMADATGSALGAMTGTSTVTAFVESTTGVESGGRTGLTALVVAICF
                     AFTLFLLPLFKAIPANAIYPVLVMVGILMFMEVKNIDFKDSAIAVASFFTIIMMPFTY
                     SITTGFAFGFLSYLLVRIFKREWDKINLGIIVLSLLSLGNFLLMALQ"
     gene            2501..2944
                     /locus_tag="RJ336_000906"
     CDS             2501..2944
                     /locus_tag="RJ336_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HDZ5213363.1"
                     /translation="MIFYSYEEFKEDVKILAKEIKKDFNPDALLAIARGGMSLGHSLA
                     VALKTRQLFALNSIHYDDTKKLDTIEIFNIPDLSKHKKILLIDDIVDSGESLAEIKKV
                     LLEKFPHIELKIATIFYKKTALLKPDFKVKEATEWVDFYWDINLD"
     gene            2989..3687
                     /locus_tag="RJ336_000907"
     CDS             2989..3687
                     /locus_tag="RJ336_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HDZ5213364.1"
                     /translation="MRIKFISFILIFFTIFAFAKEQNLDDFEQEYQNYQVNDPLSGYN
                     KAMTSFNVALYDYGLRPVLKGYNAITPEFIRLGARNFFDNLLAPLRFVGNVLQFKFEE
                     AGEEFKRFAANTIMGFGGLMDVASKMGLKKHPADLGTVLAHWGVGSGFHIVLPILGPS
                     NLRDTLTLPATWYTSFTAYIDPTWASIAISAYGFGNELSFRLDEIDEIYHNTPNLYPF
                     LRDAYEQRRNELSK"
     gene            3697..4266
                     /locus_tag="RJ336_000908"
     CDS             3697..4266
                     /locus_tag="RJ336_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HDZ5213365.1"
                     /translation="MKKIFLILTLFFNAFALQLDEISSTMQKNIDASLKLLQDSKEDK
                     KQAANGIFKLFDSIIDYKLMAKLSLSKNYSKLTPKEQEKFTTAFETSLKKSFTDKLSL
                     YKDQVLKVKNGELKNEKRYFLTTSTVVDGEEKNIIFKFYNDNNNWLIYDVDVLGVSIV
                     QTYRSQFGDILANQGFDALLQKLESIVIE"
     gene            4266..6737
                     /locus_tag="RJ336_000909"
     CDS             4266..6737
                     /locus_tag="RJ336_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RND family transporter"
                     /protein_id="HDZ5213366.1"
                     /translation="MFAKLLKFFISRPKSTFFGTLFICLFLSFFAFKLSVDASAESLL
                     LEDDADLKTFREISKHYKSDNFLLLAFKPYDEKPFSNENLAKLKKLHEELEKAPLVER
                     VFSIINAPLLQSSQNTDLKELLKNIPNIESQDINRTKAQNEILNSPFYKNNIISKDGK
                     VTGLIIYLKPDTVYNNLIEKRDLASDEKEKDQIRLAIKEHQDKQKVITKQSLDTIKSI
                     VRNYEKNKDTLYLGGVSMIADDMIAYIKSDLVLYGVSLVFLLGLALYYFFRSWRFVFL
                     PLFICFISLSAASGVFALLNFQITVISSNYVALVLIITLSVVVHLITHFIESTQNHPK
                     AKVERIVLETLLAKANPSLYAIVTTMIGFFSLILSNIEPIIKLGIMMSIGIGLALIFS
                     YLFLASILVLLKPKNYHKKEFKFNLLAFCAKTALDPKKRRMIYGISVLAIILALIGIL
                     KLRVENSFVNYFKDGSEIKKGLLVIDKNLGGTLPLEVIIRFPNNKNDQNTSDTLDSFE
                     SEFENLATQETYWFDSKKTRIAKKVHEFLENKEFVGSVLSLNSLLTLGENINDGKELD
                     DFALAFLNENLPAKFKQDLLSPFVSIENNELRFSMRIVDSDPNLRRNEFLIDLKKQLN
                     ELVKNDGVEVQITGIMVLYNNMLQSLFSSQFDTLIFVILAIFILFIIVFRDLKFSVAA
                     ILVNVIPLSVVFALMGLLGIPLDMMSITIAAIAIGIGVDDAIHYIYRFREEIKNKSLE
                     EAIMISHLSIGSALYYTTISIVLGFSVMVSSNFIPTIYFGILTVFVMILLLSGSLFLL
                     PSFLITIYSKKTKFPNQYKEHILKQ"
     gene            complement(6768..7370)
                     /gene="rdgB"
                     /locus_tag="RJ336_000910"
     CDS             complement(6768..7370)
                     /gene="rdgB"
                     /locus_tag="RJ336_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HDZ5213367.1"
                     /translation="MKIILATSNKHKVLELKEILKDFEIYAFDEVLMPFEIEENGKTF
                     KENALIKARAVFNALDEKQKKDFIALSDDSGICVDVLEGNPGIYSARFSDKGDDKSNR
                     DKLVNEMIKKGFNQSRAHYVAAIAMVGLMGEFSTHGTMHGKVIDTEKGENGFGYDSLF
                     IPKGFDKTLAQLSVDEKNNISHRFKALELAKIILKILNKG"
     gene            7537..8838
                     /locus_tag="RJ336_000911"
     CDS             7537..8838
                     /locus_tag="RJ336_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ5213368.1"
                     /translation="MLNNVLPLSFIVGTRFFGLFIVLPVLSLYALKLEGANEFLVGLL
                     VGVYALTQMILQMPFGILSDKIGRKKTMLIGLIIFIIGSLICSFAENIYTMLLGRMLQ
                     GAGAIGAVATAMISDFITEENRGKAMAVMGSFIGLSFAASMVISPLMSAKWGLSSLFD
                     LSAALSLLCIILLYTVVPKENKITHENEKTPFFHLIKQKNLALMNLTNFMQKMLMSIA
                     FLSIPIILVKHLGFASDKLWIVYSASMVAGFIAMGFAGSLGEKRGLAKQILLLGIVFF
                     ILSYLFFAFSNSIVFFIIAVVIFFIGFNLHEPIMQSCASKFCKVHEKGAALGLFNAFG
                     YGGSFIGGIIGGIFLHLDALNLLAIILVILALIWLVALFFLKNPADFKNLYLPLETPL
                     SFSTFSENLGVVDIYKNSKNLVVKFDSKLINKEELEGKIKI"
     gene            complement(8841..10514)
                     /locus_tag="RJ336_000912"
     CDS             complement(8841..10514)
                     /locus_tag="RJ336_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002902449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDZ5213369.1"
                     /translation="MQDFVYIKNDVLIPLPDAIEILDQANDKEVLVCNDKNQKAQIYA
                     PEINFYLKNSQDEILEQSKNVLTLYKARASVYDLGLDLEQSKEVQNRLILADSDTQTV
                     EFLKEHGFKVIALSSVEILAVFGSVGELCAVVKNQGEEVEIDFDFLLFKAEDLSAVRK
                     DFTRQSGCYNLLNFENLEVLLEFLQSKSPKYHYKTYISYNASVCQYHERRSEHCAKCA
                     EICPTVAILKDDEKKHLEFSQVDCLGCGGCISVCPSGSLDYAPMPRESFFTLCEFYKD
                     KKILIIPKKMSLENLNLALPKDVLPFMIEGEKWLSSMHFLALLQNSGANLVFYTDFVS
                     RGSNEAIVLLNTFFERKFQKKAIFVAKDEKELQNVLKEQEFIQDLKYDFHNNTLTTRE
                     NFAKRMQEMIKNEDFGSIESGEWLRYGKVEINPNTCTLCLSCVGACNVGALIADKQEN
                     ALKFNASLCTTCGYCELSCAEKDTLKLFRSGMEFRASYFEYQTMAKDELFACIECGKE
                     FATKKAVEKIANLMKPKFGNDENKIKTLYCCADCKAKVMIKAMGFAGQN"
     gene            10592..11914
                     /locus_tag="RJ336_000913"
     CDS             10592..11914
                     /locus_tag="RJ336_000913"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDZ5213370.1"
                     /translation="MNKFRTFPQINTLIEDESLKSYPFYIKAFFCKKVVAKLKENFSQ
                     DEISKDKLLLEIKKEIKTFYRKDLQSVINASGVVIHTNLGRSVIHEELYEACKDIICN
                     YSNVEFDLENGKRGSRYALVLEKLKMLFECEDALVVNNNAAAVFLVLNSLCYNKEIIS
                     SRGELVEIGGSFRVPEVIKAAGVKLCEVGTSNKTHLKDYEQAISENTALILKTHKSNF
                     ALMGFHSEVNIKDLHELAKEKGLLSYYDLGSGWCENLNEKLIKNEPKIKKLVQECDIL
                     SFSGDKLFGSVQAGIILGKKELIEKLKQNQLLRMLRVDKLTLSFLNESLKAYLQKDYE
                     KIITLKLLNDDLSFIEKKALRVQKELKFQTQLKKSKSLVGGGSMPDKSLDTYILTFQG
                     DALKLQTRFRKENIIGRIENDEFVLDFRTIRENELQKLILIINQMENL"
     gene            11911..13716
                     /gene="selB"
                     /locus_tag="RJ336_000914"
     CDS             11911..13716
                     /gene="selB"
                     /locus_tag="RJ336_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDZ5213371.1"
                     /translation="MKSVIIGTAGHIDHGKTSLIKALNGFEGDSLKEEQERQITINLS
                     FSNLKLKDKNISFIDVPGHKDLVKTMVSGAFGFSICLFVVDINEGLKEQSLEHLEILK
                     ILDIKNIILVLSKCDLCENIEQKSVEILEELKNLDYPILKVFHTSIKNNQGIEELKNY
                     LYTIENKENNEELIFHYYIDRVFSLKGIGTVVTGSLNEGSITLNEKIICLDTQKELIV
                     KNIQNHDTNLEQIKACNRVALSLNCDYKELKKGYLLSKKGYFKAFKECDALVKAKNLQ
                     NSKMIFCVGSRQIECKINILKKLENDEFFVHFSFDKNVFLSFDEAFILLQNNRVIGGG
                     KVLNPLSEPLKKEQKNKFLMFLKNKDFKAAFSFLKDAHKYGFGLLSSYQRFKLSHQKA
                     LKLAKELNQVFVDEKNLNVYHLQSLEEIKNFIKFILEKNPYAMLSAHSLALRITWASE
                     NFCELGLKKMSNLLDFQNGIYFKKGIDFEKLQEKNNNQMYEILKKQGIKPEAPYNLYD
                     FLELDRKSGDNILKKLTQKGLVVRLSHNLFIEKQALEKLMQECLNLLKNQSLDVQSMK
                     EYFNLSRKYAIAYLEYLDKFPQVNKEAEKRFLTNI"
     gene            13765..14475
                     /locus_tag="RJ336_000915"
     CDS             13765..14475
                     /locus_tag="RJ336_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDZ5213372.1"
                     /translation="MKKLSLILACSASLFAASNSEISDFYSKSIKAQFPNATVSVSNR
                     QKVGNTGFESVIVSVELNGQKQENILFTKDSLITPDLIDLKTGISYAQEYEMKKFQEA
                     RENFTKNAKAVAQKETMVIALGDKNKPAIYVFSDPECPYCREHLAQIDDELKNYQVNY
                     ILTPVHGKSAFEKSALIYKEAKKAKNDKEKIAILNKYYDANIKNYPKVSDTELKEVFS
                     LYEKYRSLGLSATPTIIK"
     gene            14481..15011
                     /locus_tag="RJ336_000916"
     CDS             14481..15011
                     /locus_tag="RJ336_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213373.1"
                     /translation="MSKITLILSFFIALFMSACTNATFIQSFIQTSNEGIFIRSQKQQ
                     SFKISFQNPSQLRTTLDRDLALKLKNLGLKEVKENADYEILINLVDMKKHSYAQKITT
                     SARFFYDFDPLESDGEWMVENYYTMQVNLQINSKNHNSQKTSLLARTAYLGNKERCQL
                     SLENKIINQIVSFFYF"
     gene            complement(15056..15547)
                     /gene="fldA"
                     /locus_tag="RJ336_000917"
     CDS             complement(15056..15547)
                     /gene="fldA"
                     /locus_tag="RJ336_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HDZ5213374.1"
                     /translation="MSVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSY
                     DKLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAQ
                     NLKDAGANLVGEVSTDGYTFEASDAVVDGKFVGLALDNDNQEDQTESRIDAWVEQIKP
                     YFA"
     gene            complement(15547..16242)
                     /locus_tag="RJ336_000918"
     CDS             complement(15547..16242)
                     /locus_tag="RJ336_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213375.1"
                     /translation="MLFGFDDKREFIPQIYRYLNNQELMLTFLTQYNASVDSALKIPL
                     LYAKNTKSLKMIFGNFLHNIMHVSFGKIQNINIKLNTYAFYFQKRKSLIFNTKISKNI
                     DLLRLLRIYLYGICFDAQILFSSYVYDKVSFQNNGKNIDQDGDLIIIDKKFAILPLCK
                     EINAHNLKIENEIHGLLNLIKENNFEKFYIVCPRNKNFTHFIEIKHFLCDLNKTMLKL
                     VPYKISNQIIRRK"
     gene            complement(16245..16559)
                     /locus_tag="RJ336_000919"
     CDS             complement(16245..16559)
                     /locus_tag="RJ336_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2325 domain-containing protein"
                     /protein_id="HDZ5213376.1"
                     /translation="MSVLVIGADEITPIRAVLHDLGAKKIEHWDARNENRVNRKPIPC
                     DTECIVMLTSFLNHNTMKKIKNEAKKRKIPLVCAKRSVSCVYCEYCKIFNLNKEFSCY
                     KG"
BASE COUNT         5910 a         2477 c         2448 g         5748 t
ORIGIN      
        1 aatatctttt attttggctt tttctataaa ctctttttca gtaagcaaaa attataatgc
       61 tttatttaaa aacagcaaaa gagtaaaatt aaaatgaaaa atttaattac caaactagaa
      121 aatgaagaaa gattaaacca agaagaagcc aatgcacttt gggatctaga tctttttacc
      181 ttaggcaaat acgctcacaa aaaacgcacc aaacttcatg gaaaaaaagt ttattttaat
      241 atcaatcgtc atatcaaccc aactaatatc tgtgcagata cctgtaaatt ttgcgccttt
      301 tcagcacacc gtaaaaatcc taatccttat ttgatgactc atgaagagat tatgaaaatt
      361 gtcgatgaaa ccgtaaaacg agaaaccaaa gaagtacata tcgtttcagc tcacaacaaa
      421 gatacaactt ggcaatggta tttagaaatt tttaaaatga taaaagaaaa atatcctaat
      481 cttcatgtaa aagctatgac tgctgctgag attgattttt tacatcgtcg ttttaaaatg
      541 agctatgaag aagtgataga aaaaatgctt gaatacggcg ttgattccat gccaggcggt
      601 ggggctgaaa tttttgatga agaagtgcgt aagaaaattt gtcatggaaa agttagcagt
      661 gaaaattggc ttaaaattca taaactttgg catgaaaaag gcaaacaaag taatgctacc
      721 atgctttttg ggcatataga agaaagacat cacaggatcg atcatatgtt aagactgcgt
      781 gatcttcaag atcaaaccgg tggatttaat gcttttatcc ctctagtttg gcaaagggat
      841 aatagcttta tacaaactga taaaatcatg gatagtgaag aaattttaaa aaccattgcc
      901 attgctcgtt tagtgcttga taatattaaa aatatcaaag cttactgggc aacaatgact
      961 ttaaatttag ccatggtagc acaagaattt ggagctaatg atttagacgg taccatagaa
     1021 aaagaaagca tacaaagtgc aggtggtgca aaatctgcta aaggcacaag tttaaaaact
     1081 tttatcgata tgataaaaac ttcaaatctt attcctgtag aacgcgatag tttatataac
     1141 gagctaaaaa cctactaagg agaaaaaatg gactttttta aactcaaaga aaacaatacg
     1201 agttttaaaa ccgaagttat agcagggctt actacttttt tggctatggt ttacattatc
     1261 cccgtaaatt ctagcatagt aggaaataca ggaatgccca tagaagcttt aatcaccgca
     1321 acagctttaa tcaccatagt tgcaagtgct tttaatgctt tttttgccaa tactcctgta
     1381 gctatgagtg taggaatggg tttaaatgct tattttacct ttgcggtttg tttaggtcaa
     1441 aacatagctt ggcaaagtgc cttaggagct gtttttattt caagtattat ttttctcata
     1501 ctttctttta cgcattttcg cctttgggta atccgcaata tcccaaaaga tttacgcctt
     1561 gcaatttgtg cgggtatagg ttgttttata gcttttttag gcttaagtca aatgggtgtg
     1621 atcatgcata ataaagatac tttagtaagc ataggaaatt tcaaaagtcc tcatgtgctt
     1681 tttggaattt tcactctagc tttaatcatc tttttttggg ctataaaact tcgcggagct
     1741 tttatttttg gggtattagt aagctctatt atcgcttgga ttttccattt agacaatgca
     1801 agttttcctg tgcaaatctt ttctttgcca aattttagca tggaaaatgg cctaggagcc
     1861 atctttttac aacttgatat caaaagtgcc ttaaatatta ctatgatacc tataattctt
     1921 acttttttta tcactcaact ttttgatagt ataggaacta tcacaggtgt gggtgaaaga
     1981 ggaaagattt ttgatgatcc aaaaaatgga gaaaaaaaac taagcaaaac attaatggca
     2041 gatgcaacag gatcggcttt aggagctatg acaggcactt ctacagttac agcttttgta
     2101 gaaagcacta caggggttga aagcggggga agaactgggc ttacagcttt agttgtagct
     2161 atttgttttg cttttacact ttttttactg ccacttttta aagccattcc tgcaaacgca
     2221 atataccccg tacttgtaat ggttggaatt ttaatgttta tggaagttaa aaatatagat
     2281 tttaaagata gtgctatagc tgtagcaagc ttttttacta ttatcatgat gccttttact
     2341 tactccatca ccacaggttt tgcttttggt tttctttctt atttacttgt aagaattttt
     2401 aaacgcgaat gggataaaat caatcttggc attatagttt taagtttatt atctttgggt
     2461 aattttttac ttatggcact acaataaata aggatatata atgatatttt actcctatga
     2521 agaatttaaa gaagatgtaa aaattcttgc taaagaaatt aaaaaagatt ttaatcctga
     2581 tgcactttta gctatagcaa gaggagggat gagtttgggg cattctttag cagtggcttt
     2641 aaaaacgcgt cagctttttg ctttaaactc aattcattac gatgatacaa aaaaacttga
     2701 tacaattgaa atttttaaca ttcctgattt aagcaagcac aaaaaaattc tactcattga
     2761 tgatatagta gatagtggag aaagtttagc agaaataaaa aaagttttgc ttgaaaaatt
     2821 tcctcatata gaacttaaaa ttgcaaccat tttttataaa aaaactgctc ttttgaagcc
     2881 tgattttaaa gtaaaagaag ctactgaatg ggtggatttt tactgggata taaatcttga
     2941 ttaaaaattt gctataattt tacttttaaa atttttagga gtttttgctt gagaataaaa
     3001 tttatatctt ttattttaat tttttttact atttttgctt ttgctaaaga acaaaattta
     3061 gatgattttg aacaagaata ccaaaactat caagtaaacg atccactttc aggatataac
     3121 aaagctatga caagttttaa tgtggctttg tatgattatg gtttgcgtcc cgttcttaag
     3181 ggctataacg ctatcactcc cgaatttata agattagggg caagaaattt ctttgataat
     3241 ttacttgctc ctttgcgttt tgtaggcaat gttttgcagt ttaaatttga agaagcggga
     3301 gaagaattta aaagatttgc tgccaatact attatgggct ttggtggact tatggatgtg
     3361 gcatcaaaaa tgggtcttaa aaaacatccc gcggacttag gaactgtttt ggctcactgg
     3421 ggtgtaggaa gcggttttca tattgtctta cctatactcg gccctagtaa tcttagagac
     3481 actcttactt tacctgcaac ttggtataca agttttaccg cttacattga tcctacttgg
     3541 gcaagtatag ctataagtgc ttatggattt ggtaatgaac ttagttttag gcttgatgaa
     3601 attgatgaaa tttatcacaa cacgcctaat ttatatccat tcttgcgtga tgcttacgag
     3661 caaagacgca atgaacttag caaataaagg aaattaatga aaaaaatatt tttaatcttg
     3721 actttatttt ttaatgcttt tgccttacaa ctagatgaaa tttctagcac tatgcaaaaa
     3781 aacattgatg caagcttaaa acttttacaa gatagtaaag aagataaaaa acaagctgct
     3841 aatggaattt ttaaactttt tgatagcata atagattata aactcatggc aaaactgagt
     3901 ctttcgaaaa attattctaa attaacccca aaagaacaag aaaaatttac cacagccttt
     3961 gaaacaagtc ttaaaaaaag ttttaccgat aaactcagtc tttataaaga tcaggtttta
     4021 aaggtcaaaa atggtgagtt aaaaaatgaa aaacgttatt ttttaaccac ttctacggta
     4081 gtagatgggg aagaaaaaaa tatcattttc aaattttaca atgataataa caactggctt
     4141 atttatgatg tagatgtttt aggtgtgagt atagtacaaa cttatagatc acaatttgga
     4201 gatattttag ccaaccaagg ctttgatgcc ctacttcaaa aacttgaaag tattgtcata
     4261 gaataatgtt tgcaaagctt ttaaagtttt ttatttctcg tccaaaaagt actttttttg
     4321 gaaccttgtt tatatgtctg tttttaagct tttttgcttt taagcttagt gtagatgcaa
     4381 gtgctgaaag tttactttta gaagatgatg cagatttaaa aacttttaga gaaatttcaa
     4441 aacattataa aagtgataat tttttacttt tagccttcaa accctatgat gaaaaacctt
     4501 tttcaaatga aaatttagcc aaattaaaaa aacttcatga agaattagaa aaagcccctt
     4561 tagtagaacg cgtttttagt atcatcaatg cccctttgct tcaaagttcg caaaatacgg
     4621 atttaaaaga acttttaaaa aatatcccaa atatagaaag ccaagatata aaccgcacaa
     4681 aagcccaaaa tgaaatttta aatagtccct tttataaaaa taatatcatc tcaaaagatg
     4741 gaaaagtaac agggcttatt atttacttaa agcctgatac agtttataat aatcttatag
     4801 aaaaacgcga tcttgctagt gatgaaaaag aaaaagatca aattcgtctt gccataaaag
     4861 aacatcaaga caagcaaaaa gttatcacga aacaaagtct agatactatt aaaagcatag
     4921 ttcgaaatta tgaaaaaaat aaagatacgc tctaccttgg tggcgtaagc atgatcgctg
     4981 atgatatgat agcttatata aaatctgatc ttgtgcttta tggtgtttct cttgtgtttt
     5041 tactaggact tgcactttat tattttttcc gttcatggcg ttttgttttt ttacctcttt
     5101 ttatttgttt tataagctta agtgcagcta gcggagtttt tgcactttta aattttcaaa
     5161 tcacagttat ttcatcaaat tatgttgctt tggttttaat tatcacctta agtgtagttg
     5221 ttcatttgat cacgcatttt atcgaaagca cccaaaatca tcccaaagct aaagttgagc
     5281 gcatagtgct tgaaacctta ctagccaaag caaatcctag cctttatgcc attgttacaa
     5341 cgatgatagg atttttttct ttaatcctat caaatatcga acctatcata aaacttggca
     5401 ttatgatgag tataggtata ggtttagctc ttatctttag ttatttgttt ttagcaagta
     5461 tcttagttct tttaaaacca aaaaattatc ataaaaaaga gtttaaattt aatcttttag
     5521 ccttttgcgc caaaaccgct cttgatccta aaaagcgtcg catgatttat ggaatttcag
     5581 ttcttgctat aatcttagct ttaataggca ttttaaaact cagagttgaa aattcttttg
     5641 tcaattattt caaagatggt agtgaaatca aaaaaggact tttggttatt gataaaaatc
     5701 taggtggaac cttgccttta gaagtcatca ttcgttttcc aaataataaa aacgatcaaa
     5761 atacaagtga tactcttgat agttttgaaa gtgaatttga aaatttagcc acacaagaaa
     5821 cttattggtt tgactctaaa aaaacacgta ttgcaaaaaa agttcatgaa tttttagaaa
     5881 acaaagaatt tgtaggctcg gttttaagtc ttaatagtct tttaacccta ggggaaaata
     5941 tcaacgatgg aaaagagtta gatgattttg cccttgcgtt tttaaatgag aatttacctg
     6001 ctaaatttaa acaagacttg ctttcacctt ttgtaagcat agaaaataac gagttaagat
     6061 ttagcatgcg tattgttgat tctgatccga atttaagacg taatgagttt ttaatagatc
     6121 ttaaaaaaca gctcaacgag cttgtaaaaa acgatggagt agaagttcaa atcacaggca
     6181 taatggtgct ttataataat atgctccaaa gtcttttttc atcgcaattt gatactctta
     6241 tatttgtaat tttagctatt tttatacttt ttatcattgt ttttagagat ttaaaatttt
     6301 cagttgcggc tatattggta aatgttattc ctttaagtgt ggtttttgct cttatggggc
     6361 ttttaggtat tcctttggat atgatgagta ttactatagc tgctattgct ataggcatag
     6421 gtgttgatga tgctatacat tatatttatc gttttagaga agaaattaaa aacaaaagcc
     6481 tagaagaagc cattatgatt tctcacctta gtataggttc agcactttat tataccacaa
     6541 ttagcatagt tttaggtttt agtgttatgg tgagtagcaa ttttattcca acaatttatt
     6601 ttggaatttt aaccgttttt gtaatgattt tgcttttaag tggaagtttg ttcttattac
     6661 caagcttttt aatcactatt tattctaaga aaaccaagtt tccaaaccaa tataaagagc
     6721 atatattaaa acaataatag ctatatattt taaaaaattt ttcattttta tcctttattt
     6781 aaaatcttta aaatgatttt tgcaagctct aaagctttaa aacgatgaga gatattattc
     6841 ttctcatcca cgctaagctg ggctaaggtt ttatcaaaac cctttggaat aaaaaggcta
     6901 tcataaccaa aaccattttc acctttttct gtatctatta cttttccatg catggttcca
     6961 tgcgtactaa attcccccat caaacccacc atagcaatag cagcaacata atgtgccctg
     7021 ctttgattaa aacctttttt tatcatttca ttgacaagtt tatcacggtt acttttatca
     7081 tcgcccttat cgctaaatcg agcagaataa attcctggat ttccttctaa aacatctaca
     7141 caaatgccac tatcatcact taaagcgata aaatcttttt tttgcttttc atccaaagca
     7201 ttaaaaaccg ctcttgcttt aatcaaggcg ttttctttaa aagtttttcc attttcttca
     7261 atctcaaaag gcattaaaac ttcatcaaaa gcataaattt caaaatcttt taaaatttct
     7321 ttaagttcta aaactttatg tttattgctc gtagctagga taatcttcat aacaaaagct
     7381 ccaaaataat atcaaaaaca aaaatatgat tttataaaat ttatccttgt gcgtagcttt
     7441 taaatatcaa atgataaaac gatgttaatc aatgcttaat ccatttcata gtaaaattat
     7501 cctaatttaa atttcaaatt taataggaaa ttgataatgc taaataatgt cttaccctta
     7561 tctttcatag ttggaacaag attttttggg ctttttatag ttttgccagt tttaagtctt
     7621 tatgctttaa aacttgaagg tgctaatgaa tttttagtgg gacttttagt tggtgtttac
     7681 gccttaaccc aaatgatttt acaaatgcct tttgggattt taagtgataa aattggtcgt
     7741 aaaaaaacca tgctcattgg actgattatt tttataatag gctctttaat ctgctcgttt
     7801 gcagaaaata tttacaccat gcttttaggg agaatgctcc aaggtgcagg ggctattgga
     7861 gctgtggcta cagcaatgat aagtgatttt atcacagaag aaaatcgtgg taaagccatg
     7921 gcagtaatgg gttcttttat aggacttagt tttgcagctt ctatggtaat ctctccttta
     7981 atgagtgcaa aatggggttt atctagcctt tttgatctta gtgcagcttt gtctctttta
     8041 tgtataattt tactttatac cgttgtacct aaagaaaaca aaatcactca tgaaaatgaa
     8101 aaaactcctt tttttcatct tattaaacaa aaaaatttag cccttatgaa tcttactaat
     8161 ttcatgcaaa aaatgcttat gagtatagca tttttaagta ttcctattat tctagtaaaa
     8221 catttaggct ttgcttctga taaactttgg attgtttata gcgcttctat ggtggcaggt
     8281 tttatcgcta tgggctttgc tggaagttta ggcgaaaaaa gaggtttagc taaacaaatt
     8341 ttactcttag gaattgtttt tttcatactt tcttatcttt tttttgcttt tagtaattct
     8401 atagtttttt ttatcatagc agttgtgatt ttttttatag gttttaattt acacgaacct
     8461 attatgcaaa gttgtgcatc aaaattttgt aaagttcatg aaaaaggtgc agcattaggg
     8521 ttgtttaatg cttttggata tggtggaagt tttataggtg gtattatcgg agggatattt
     8581 ttacatctag atgccttaaa tcttttggct attattttag taattttagc tctaatttgg
     8641 cttgtggcat tatttttctt aaaaaatcca gctgatttta aaaaccttta tctaccttta
     8701 gaaacgcctt taagtttcag tacttttagt gaaaatttag gggttgtaga tatttataaa
     8761 aactctaaaa atcttgttgt taaatttgat agcaaactta taaataaaga agaattagaa
     8821 ggcaaaatta agatctaaat ctaattttgc cccgcaaaac ccattgcttt tatcatcact
     8881 tttgccttgc aatctgcaca gcaataaagt gttttgattt tattctcatc attaccaaat
     8941 ttaggtttca ttaaattggc tattttttct acagcttttt tggtggcaaa ttctttacca
     9001 cattctatac aggcaaaaag ctcatctttt gccatggttt gatattcaaa ataagaagct
     9061 ctaaactcca ttccactacg aaataatttt aaagtatctt tttcagcgca acttaactca
     9121 caatacccac aagtcgtgca aagagaggca ttaaatttca aagcattttc ttgtttatca
     9181 gcgattaaag ctcctacatt acaggcaccc acacaagaaa gacaaagcgt acaggtgtta
     9241 ggattgattt ctaccttacc ataacgcaac cattcgccac tttctatact gccaaaatct
     9301 tcatttttta tcatttcttg cattcttttg gcaaaatttt ctcttgtagt taaggtgttg
     9361 ttatgaaaat catattttaa atcttgtatg aattcttgct cttttaaaac attttgcaat
     9421 tctttttcat ctttagcaac aaaaatagct tttttttgaa attttctctc aaaaaaagta
     9481 tttaaaagca caatagcctc attactacca cgagatacaa aatccgtata aaaaactaaa
     9541 tttgctccac tattttgcaa aagggctaaa aaatgcatag aagaaagcca tttttcaccc
     9601 tctatcataa agggtaaaac atcttttggt aaagcaagat ttaaattttc taaagacatt
     9661 tttttaggaa tgattaaaat ttttttatct ttataaaact cacaaagggt aaaaaaactt
     9721 tctcttggca taggagcata atcaagtgat ccgctaggac acacgctaat acatcctcca
     9781 caacccaaac aatccacttg agaaaattct aaatgctttt tttcatcatc ttttaaaatc
     9841 gccacagtag gacaaatttc agcacatttt gcacaatgct cactgcgtct ttcgtggtat
     9901 tgacacacgc tagcattata gctaatataa gttttataat gatattttgg acttttgctt
     9961 tgcaaaaact ctaacaatac ttcaagattt tcaaaattta aaagattata acatccactt
    10021 tgtcttgtaa aatctttacg cacagcgctt aaatcctcag ctttaaaaag taaaaaatca
    10081 aaatctattt ccacttcttc gccttgattt ttaaccacag cacaaagctc ccctacactt
    10141 ccaaaaacag ctaaaatttc tacactgctt aaagcaataa ccttaaatcc atgttctttt
    10201 aaaaactcta cggtttgagt atcgctgtct gctaaaatca aacgattttg cacttctttg
    10261 ctttgttcta aatcaagccc taaatcataa acactagctc ttgctttata aagcgttaaa
    10321 acatttttac tttgctctaa aatttcatct tgagaatttt taagataaaa attaatctca
    10381 ggggcataaa tttgtgcttt ttgattttta tcattgcaaa ctaatacttc tttatcattt
    10441 gcctgatcta aaatttcaat agcatcgggc aaagggatta aaacatcatt ttttatataa
    10501 acaaaatctt gcattatctt ccttaatctc tttaaaacat cattttataa attctatgtt
    10561 aaaataacca aatattttct taaggcttaa gatgaacaaa tttagaactt ttccacaaat
    10621 taacactctt attgaagatg agagtttaaa atcctatcct ttttatatca aagcattttt
    10681 ttgtaaaaaa gttgtcgcaa aactaaaaga aaatttttcc caagatgaaa tttctaaaga
    10741 taaactactt ttagaaatca aaaaagaaat caaaactttt taccgcaaag atttacaaag
    10801 tgtgattaat gcaagcggag tggttataca tacaaacctt ggtagaagtg taatccatga
    10861 agaactttat gaagcgtgta aagatatcat ttgtaattat tctaatgtag agtttgattt
    10921 agaaaatgga aaaagaggct ctcgctatgc tttggtgcta gaaaaactta aaatgctttt
    10981 tgaatgcgaa gatgctttag tggtcaataa caacgctgcg gcagtttttt tagtacttaa
    11041 ttctctttgt tacaataaag aaatcataag ctcaagagga gaacttgtag aaattggtgg
    11101 cagttttcgc gtgcctgaag taataaaagc tgcaggtgta aagctttgcg aagttggaac
    11161 tagcaacaaa acacacttaa aagactatga acaagctatc agtgaaaata ccgctctaat
    11221 tttaaaaacc cacaagtcta atttcgctct tatgggtttt cacagtgaag taaatataaa
    11281 agatctacat gaactagcaa aagaaaaagg gcttttgagt tattatgatc taggttctgg
    11341 ctggtgtgaa aatttaaatg aaaaactgat taaaaatgaa cctaaaatca aaaaactcgt
    11401 acaagaatgt gatattttaa gttttagtgg agataaactt tttggtagtg tgcaagcagg
    11461 cattatactt ggaaaaaaag aactcataga aaaacttaaa caaaatcaac ttttaagaat
    11521 gctaagagtg gataaattaa ctctatcttt tttaaacgaa agcttaaaag cttatttgca
    11581 aaaagattat gaaaaaatta ttaccttaaa acttttaaat gatgacttat cctttataga
    11641 aaaaaaagct ttaagagtgc aaaaagaatt aaaatttcaa acccagctta aaaaaagcaa
    11701 aagtttagta ggaggaggtt ctatgcctga taaaagttta gatacttata tactgacttt
    11761 tcaaggagat gctttaaaac tacaaactcg atttagaaaa gaaaatatca taggacgcat
    11821 tgaaaatgat gaatttgttc ttgattttag aactatacga gaaaatgaac ttcaaaaact
    11881 tattcttata atcaatcaaa tggaaaactt atgaaatctg ttattatagg aaccgcagga
    11941 catattgatc atggaaaaac ttcactcatt aaagctttaa atggttttga aggcgatagc
    12001 ttaaaagaag aacaagaaag acaaatcacc attaatttaa gtttttcaaa tcttaaatta
    12061 aaagataaaa acatttcttt tatcgatgtt ccagggcata aagatttggt taaaactatg
    12121 gtaagtggag cttttggctt tagtatttgt ttatttgtcg tagatattaa cgagggttta
    12181 aaagaacaaa gtttagaaca tttagaaatt ttaaaaattc ttgatattaa aaatatcatt
    12241 ttagtgctta gcaaatgtga tctttgtgaa aatatagagc aaaaaagtgt agaaatttta
    12301 gaagagttaa aaaatttaga ttatcccatt ttaaaagtat ttcacaccag tataaaaaat
    12361 aatcaaggca tagaagaatt aaaaaattat ctttatacca tagaaaacaa agaaaacaat
    12421 gaagaactga tttttcatta ttatatcgat agagtttttt ctctaaaagg cataggaact
    12481 gtcgtcacag gtagcctgaa tgaaggaagt atcactttaa atgaaaaaat catctgttta
    12541 gacactcaaa aagaactcat tgttaaaaat atacaaaatc acgatactaa tttagagcaa
    12601 atcaaagctt gtaaccgtgt ggctttaagt ttaaattgtg attataaaga gttgaaaaaa
    12661 ggttatttgc taagtaaaaa aggttatttt aaagccttta aagaatgcga tgctttagtt
    12721 aaagcaaaaa atttacaaaa tagcaaaatg attttttgcg tgggttcaag acaaatagaa
    12781 tgcaaaataa atatattaaa aaaactagaa aatgatgaat tttttgtgca ttttagtttt
    12841 gataaaaatg tatttttaag ttttgatgag gcttttattt tattacaaaa caatcgtgtt
    12901 ataggcggtg gtaaggtttt aaatccttta agcgaacctt taaaaaaaga acaaaaaaat
    12961 aaatttttaa tgtttttgaa aaataaagat tttaaagcag ctttttcttt cttaaaagac
    13021 gcacataaat acggctttgg tttgctttca agctatcaga gatttaaact ctctcatcaa
    13081 aaagcattga aattagcgaa agaattaaat caagtatttg tcgatgaaaa aaatcttaat
    13141 gtatatcatt tacaaagtct agaagaaatt aaaaatttca tcaaattcat acttgaaaaa
    13201 aatccttatg ccatgctttc agcacattct ttagctttaa ggattacttg ggcaagtgaa
    13261 aatttttgcg aacttgggct taaaaaaatg tcaaatttat tggattttca aaatggaatt
    13321 tattttaaaa aaggtataga ttttgaaaaa cttcaagaaa aaaacaataa ccaaatgtat
    13381 gaaattttaa aaaaacaagg tattaaaccc gaagctcctt ataatcttta tgatttttta
    13441 gaacttgaca gaaaaagcgg agataatata ctcaaaaaac ttacccaaaa aggcttggtt
    13501 gtaagacttt cacacaatct ttttatagaa aaacaagctc ttgaaaaact tatgcaagaa
    13561 tgtttaaatt tattaaaaaa tcaaagtctt gatgtgcaaa gtatgaaaga atatttcaat
    13621 ctttcaagaa aatatgctat tgcttattta gaatacttag acaaatttcc tcaagtaaac
    13681 aaagaagctg aaaaaagatt tttaacaaac atttagaaaa tcattataga attaaacata
    13741 atttatttaa aggatttata aactatgaaa aaattaagtt taattcttgc ctgttcagca
    13801 tctttgtttg ctgcaagtaa ttcagaaatt agtgattttt attcaaaaag cattaaagca
    13861 caatttccaa atgctaccgt tagtgtatca aatcgtcaaa aggttggtaa tacgggtttt
    13921 gaaagtgtta ttgtaagcgt tgaattaaat gggcaaaaac aagaaaacat tctttttaca
    13981 aaagatagtc ttattacccc tgatcttatc gacttgaaaa cgggaatttc ttatgctcaa
    14041 gaatatgaaa tgaaaaaatt tcaagaagca agagaaaatt ttacaaaaaa tgctaaagct
    14101 gtagcacaaa aagaaaccat ggtaatagct ttgggagata aaaataaacc tgcgatttat
    14161 gttttttcag atcctgaatg tccttattgt agagaacatt tagctcaaat tgatgatgaa
    14221 cttaaaaact atcaagttaa ttatatttta actccagtac atggaaaatc tgcttttgaa
    14281 aaatccgctc taatctacaa agaagcaaaa aaagcaaaaa atgacaaaga aaaaatcgca
    14341 attttaaaca aatactatga tgcaaatatc aaaaattatc caaaagtaag cgatacagaa
    14401 ttaaaagaag ttttttcctt atatgaaaaa tatcgctcat taggtcttag cgctactcca
    14461 actattatta aataaaccta atgtctaaaa ttactttaat tttaagcttt tttatagcac
    14521 tctttatgag tgcttgcacc aatgcaactt tcatacaaag ctttattcaa acaagcaatg
    14581 aaggcatttt tatcagatca caaaaacaac aaagttttaa aatttccttt caaaatccta
    14641 gccaacttcg aactactttg gatagagatt tggctttaaa acttaaaaat ttaggcttaa
    14701 aagaagtaaa agagaatgca gattatgaaa ttttaatcaa tcttgtagat atgaaaaagc
    14761 attcttatgc tcaaaaaatc acaacttcag caagattttt ttatgatttt gatcctttgg
    14821 aaagtgatgg agaatggatg gtagaaaact actatactat gcaagttaat ttacaaatca
    14881 actctaaaaa tcacaattct caaaaaacaa gtcttcttgc aagaacagct tatcttggaa
    14941 ataaagaacg ctgtcaatta tctttagaaa ataaaattat aaatcaaata gtgagttttt
    15001 tttattttta agaaaagaca atcaagagta taaaaactct tgattttaag aattattaag
    15061 caaaataagg tttgatttgt tctacccaag catcaattct tgattcagtt tgatcttctt
    15121 gattatcatt gtcaagagca agtccaacaa atttaccatc tacaaccgca tcgcttgctt
    15181 caaatgtata accatcagtt gaaacttctc ctaccaaatt tgcacctgca tcttttaaat
    15241 tttgagctaa tttacccatg ccgccacaaa aagtgtcaga ataactttca ctatcaccca
    15301 taccaaatac agctacagtt tttccaccaa gactaagccc tgaaaaatca aaaccatccc
    15361 aatcatcttg taaatcacca cttccccaag ttgaagttcc acaaattaat ttatcgtaag
    15421 aattcatttt agccgcatca atatctgaga tattaaaaac atcgctaatt ccaagttttg
    15481 aagcaattgt attagccgct ccttctgtat ttcccatagc actaccatag attactgcta
    15541 ctgacattat tttctcctta taatttgatt tgatatttta tacggaacta attttaacat
    15601 agttttgttt aaatcacaca aaaaatgttt tatttcaata aaatgtgtga aatttttgtt
    15661 acgcggacaa acaatataaa atttttcaaa attgttttct tttattaaat tcaataatcc
    15721 atgaatttca ttttcaattt ttaaattatg tgcattaatc tctttacaaa gtggtaaaat
    15781 tgcaaatttc ttatctatta taataagatc accatcttga tctatatttt ttccattatt
    15841 ttgaaaagaa accttatcat aaacataaga gctaaataaa atttgtgcat caaaacaaat
    15901 gccataaaga taaattctta aaagtcttaa aagatcgata ttcttagata ttttagtatt
    15961 aaaaatcaag ctttttcttt tttgaaagta aaaagcgtat gtattaagct tgatatttat
    16021 attttgaatc ttaccaaatg aaacatgcat tatattatgc aaaaaatttc caaatatcat
    16081 ttttaaactc ttggtatttt ttgcatataa aagaggaatt tttagagcac tatcaacgct
    16141 cgcattatat tgagttaaaa aagtcaacat aagctcttga ttgtttaaat agcgataaat
    16201 ttgcggtata aattctcgct tatcatcaaa tccaaataac atctttaacc tttatagcaa
    16261 gaaaattctt tattaagatt aaaaatttta caatattcac aatacacaca acttacactt
    16321 ctttttgcac atactaatgg aattttgcgc tttttagctt catttttgat ttttttcata
    16381 gtattatgat ttaaaaagct tgttaacatt actatacatt ctgtatcaca aggaatcggc
    16441 ttgcgattaa ctctattttc attacgtgca tcccagtgtt ctattttttt agcacctaaa
    16501 tcatgtaaaa cagctctaat aggagtgatt tcatctgcac caataaccaa aactgacata
    16561 aattctcctt tgtgattttt aaa
//
LOCUS       DAPWGO010000032        15914 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.033, whole genome shotgun sequence.
ACCESSION   DAPWGO010000032 DAPWGO010000000
VERSION     DAPWGO010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15914
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.033"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(55..2421)
                     /locus_tag="RJ336_000920"
     CDS             complement(55..2421)
                     /locus_tag="RJ336_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein"
                     /protein_id="HDZ5213377.1"
                     /translation="MRILFLILLSFLNAFAFELVLNTGRENNQAFAVLHASNDLEFTC
                     QKFITEAKVHFECDIAGMVDNKLKDQSFSAFDLKFIQEAQKIKMIILPKIQARMFDTS
                     QNIYIDKELSSSSSHKSKAFTFIFTPELVRVKDYDGLDFNINFPHESLPYVGALDLNS
                     DPVVIPQSADINTYLRIKKEYDKANYNQVVIDAQNAINRYRGSIFASEFILYKLRAQN
                     KLYTQDPSMRDQQILEKMIDDAKNWTRTFTSDKNFSEVLHIMLRTYIALAQRADVEYT
                     MSILDNEQPNNYFTQLSKLDYADYIYNLNEKEKAVNIYENTYFNTKNLDLAARAAMSL
                     AKNLLSNEQVNKAIEYINTILKANPEYFGKDIPRSLELAKLFNQKGQFDISASIYEDA
                     FAKMSKLDPSYEETLKDLALVLSHTNRSSDAKKYLDLYMDDYLDGKYLDEIKKASDEV
                     FFALGDNNASFLHQRYTDLMKQYANKDENIANKALDEDVALYYKEGNFSAILAYKDLI
                     ESKKIPNATQFLEKAAINDLKNAIKADNCINAANIFMRFSAYDIGQKIENKKQMLACL
                     IRTSNVEQALDYIDKNYNEDSIFYGLQKASILFDNKQYPQVIKISKDIANSRILKSDD
                     ENFKAYYLQFLSLLRLNDYNQAIKILQILESFPMNFSMVEAYDALLSYANDHNMQTTI
                     LTYAPKAIDYQNFKGINLFSPNLEFIYLDALTKINKNEESLAVLTDLLKLKLSDEDRA
                     RALYIQALTYERMQNVQAEKESLKQCLEIKSASNWQNLCKSKNQILNQ"
     gene            complement(2444..3832)
                     /locus_tag="RJ336_000921"
     CDS             complement(2444..3832)
                     /locus_tag="RJ336_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HDZ5213378.1"
                     /translation="MLNNFLNLELLNISLSYPFLFLITTAIVLLLCSGFWKFHRSFYI
                     GISSLSLIVSAFLILNNANAQGLEAKAFLATLNNDIVSFYAFLVILCFSFLYLLMQKE
                     ENQGEFYALFLFMIASLLLMVSSSNLVLIFIGLESSSLALYTLIAMRGSDNAISSAIK
                     YFSVAAVGAGFFVMAVAFIYLKTGTLDLSANLALKNEFQKDPMLLGAGVMIFVLCAIK
                     LSLAPFHFWLKDVYYAAHTNLVAFISVVPKVAMLVVVIRLFDFLNNTGFEYIIIVLAI
                     FSMLIGAFAALSQNNIKKMFAYSSVVHSSLVLVACIPLLKEQNFDGILLAIFGYWTLF
                     AFANYAVFMILSNYENNSYESLNGLLVKKPLIVFCLSISVLSLAGIPPFGVFWGKFMI
                     LNTAILNGYWYLALFVALSSVIMLYAYLKILIHALFMKNDRVYNIKFSFIQNFILACC
                     VCVSTFAILLML"
     gene            complement(3822..5309)
                     /locus_tag="RJ336_000922"
     CDS             complement(3822..5309)
                     /locus_tag="RJ336_000922"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HDZ5213379.1"
                     /translation="MLNYLIFFPLISAFVVLLLNRGGVKVFSVVVSFMILALNLDIFA
                     DFLQGVSFDYNLSFKILKFFSFHVGVDSIALILMLLSSLMIFLSFLFLKLEQKALVSC
                     IFFLEFAIMGLFSAKDGLLFYVFWEFSLLPLLYIMGVYGKDFRAGVKFFIYAFAGSIL
                     MLIALIYQAYLNYQLLNIFTFDLEIWKNNASAVNFTEQLLLFGAFFIAFAIKAPLFPL
                     HTWAPKVYVNSPVLVSVMLVVFKMAPFGFLLFCLPLFPDASVYFMPLIVALCIVSIVY
                     NALIAYRAENIKELIAYSSISHLGVMILGIFSLNALGISGAVFYMFAHGIVTGALFLM
                     VELLYQRYHTYDISFYHSLAKKAPLFSIFFMLILLASVSLPLTVSFVGEFLILLGIAK
                     INLFYALLAGLVIILGAIYMFAVFRKIFFMQKQSFIENFSLRLREIVALVCIIVMIFG
                     LGLMPNILLKPIQKDVDNLIKTMNIRAVEQNTLDFLSKIGEANVK"
     gene            complement(5311..7101)
                     /gene="nuoL"
                     /locus_tag="RJ336_000923"
     CDS             complement(5311..7101)
                     /gene="nuoL"
                     /locus_tag="RJ336_000923"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HDZ5213380.1"
                     /translation="MQNLALISLFSPFVAFLFASCFALSEKKQFVGIICSLLVALSAF
                     CSLYLLFCNEAFNVSLFEWFAGVNFGFDIDAISLTMMSVVGIVATCVHFYSIFYMAHD
                     EGFNKFFAYLGLFVFSMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNDTYSFAAN
                     EAFIMNRIADLGMLLGIFWLYLQAGTLKYDEVFSMAQSLDHNALILIATCLFIGAMGK
                     SAQFPFHTWLADAMAGPTPVSALIHAATMVTAGVYLVIRASTLYDLVPEVSYIIALLG
                     AFVAIFAASMALVARDLKRIIAYSTLSQLGYMFVAAGLGAYGIALFHLATHAFFKSLL
                     FLGAGNVMHAMNDKLDIKKMGGLFKPLKFTAILMCIGSLALAGIYPFAGFFSKDLILG
                     YSFISFHHGIFLVLLIAAFLTAFYSFRLLMLVFFTPARHNEHPHEASKIALLAMSPLM
                     VLAIVAGFFEHSFFEYLSTKLVFIDAQNQIVMICASVAAILGVILAIFAYKNSWFKES
                     IEENKIHKLLSNDYFIPQFYHQFIVSKYESLCAILKHCDLYIFDRIVEKIALYSQIIS
                     QKMIMPNSLNLMLRFLVAAFVILLILVWMV"
     gene            complement(7103..7399)
                     /gene="nuoK"
                     /locus_tag="RJ336_000924"
     CDS             complement(7103..7399)
                     /gene="nuoK"
                     /locus_tag="RJ336_000924"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HDZ5213381.1"
                     /translation="MIEKYFFIAILMFVIGLVGILKRQNLIMLFISSEILLNSANLAL
                     VAASKMHNDLNGQVFALFIMGVAACEVAVGVALCVLWYRRKGTLELKSLKEVEA"
     gene            complement(7396..7914)
                     /locus_tag="RJ336_000925"
     CDS             complement(7396..7914)
                     /locus_tag="RJ336_000925"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HDZ5213382.1"
                     /translation="MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGF
                     YFLLDAEFLGVIQIIVYSGAVLGLYSFAIMFFDASKEFKEQLKAKKSFFTLVVLSAIL
                     LLAMLIGFKYQNISTDLPLNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAI
                     VLARKELTKEKQ"
     gene            complement(7911..8552)
                     /gene="nuoI"
                     /locus_tag="RJ336_000926"
     CDS             complement(7911..8552)
                     /gene="nuoI"
                     /locus_tag="RJ336_000926"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HDZ5213383.1"
                     /translation="MKNYYLVDEKRKTPVSAWEKISQALRRSVKLELFVGLFVMMREL
                     LKRNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNCIRMET
                     SLDENGRKKVGNYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRSYFGYKQDFL
                     TPIDKLKNQVEFEGAGSLRKDADLLVVKTPNYYDVMIERASENQDTQEQGENK"
     gene            complement(8562..9560)
                     /gene="nuoH"
                     /locus_tag="RJ336_000927"
     CDS             complement(8562..9560)
                     /gene="nuoH"
                     /locus_tag="RJ336_000927"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HDZ5213384.1"
                     /translation="MSDFAFFALEALIKCIIIIAIFASLAGLATYAERKVLAYFQRRI
                     GPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKFIFAIAPLISAICAFVSLAAIPMLP
                     EFTLFGRVIQPIVADINVALLFVIGTSGLCFYAVFLGGLASNNKWSILGAARGLVAII
                     SYESVGALALIAIVMLVGSFSLVDINNYQSDGFFSWLIFKQPLAFVLFIIALFIETNR
                     TPLCLTENDAEIVAGYGTEYSGLRWGMFFIGEYASMIAGAILVTLLFLGGFNSFWIIP
                     GWIMMIVKSSFIFFWYFWARAAFPQLRPDQVMKMCYLILIPLAVLNLLITALAVLL"
     gene            complement(9553..12015)
                     /locus_tag="RJ336_000928"
     CDS             complement(9553..12015)
                     /locus_tag="RJ336_000928"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HDZ5213385.1"
                     /translation="MTVKINGIDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLAC
                     RMCMVEADGKKVYSCNTKAKEGMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSG
                     ECELQNFTHKSRVNVQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESA
                     LKTVPRSGDSVDNSFKESMGKDAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTG
                     ALIGSKFQYTSNIWELKRIPASNPHSSDCELMYYDIKQSGISNQKEKIYRVSNDFAFA
                     SLNKAARFAFDTQNEADKDEKAFEELVKLFEKNEIKNIKFNSFITNEEALILQNLKKK
                     FNLSLINEEALKFKEFLQEFIANSGEFYSANTQDIIKSDFLVVAGMLLRYDAPTLSYK
                     INNALVMNKGSGLYFHPMEDVGIAKYSKNFISHIHKSGDEEQILYFLLQKFSQDEGIK
                     THLAEFFVSENKEIEESINEEVVEQVIEKDEEGNEIQKEVKKVVPKKVKKIIEVQRSV
                     FAKNLGIDEDKLEDLLLKKANFTLVIGSDFYFHKNATKLAKLLALIQNTTPFKVFLNP
                     THTNTLGVAMICDLDKNTQEGKTLGYNEKGDFSFSYEEHANLASASLNQQEGTFLNYD
                     KRVVPTNAALEFKGYFLNDLANALGFDEEYTINYTKRLPINKGFSPIDFDHLDNFYTN
                     AGDCKRGYELNLECFKQVAKKEFISPNFENLNPKEDEILLYSANPSYQFGRFSNRASA
                     INEVIFLGVSENLAKEKNLKDKDLVKLKIKDKELSLSVRVDKDIKNGAFLPYFDEKLD
                     TLSFFDERFVVANLEKLGANHE"
     gene            complement(12012..12704)
                     /locus_tag="RJ336_000929"
     CDS             complement(12012..12704)
                     /locus_tag="RJ336_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213386.1"
                     /translation="MIYDNALCFLDMLSLKNKNLCEKIGVNSINISCLEDKNLKAKFY
                     KCEIASLSFVLALLCKLSDEGQFSDLDEGYLSAESCFGEEEAGEVLAFLREAKYLIID
                     KNIHSYKDSENIKYFLNFLSVKYELKILDSDEEECDFKKAKLNTLKELDNYDGLVLFR
                     ANLQDKNLHCSKQFLQIAKCKDQSEVEILAKDFSLKAKLCLDENLQGTIAFLNYENNG
                     FDFIPIRIKEAK"
     gene            complement(12701..12928)
                     /locus_tag="RJ336_000930"
     CDS             complement(12701..12928)
                     /locus_tag="RJ336_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213387.1"
                     /translation="MRRIDLRKSKELFEDLAQIIKEAKQGEVLVVLFEIGDFSPVEKS
                     FSFIKEQGCELLNSLKFNQVDWTIVIKKERV"
     gene            complement(12925..14151)
                     /gene="nuoD"
                     /locus_tag="RJ336_000931"
     CDS             complement(12925..14151)
                     /gene="nuoD"
                     /locus_tag="RJ336_000931"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HDZ5213388.1"
                     /translation="MQIPSKLKPYYENIAFEQEDSKMIINLGPQHPSAHGNLRLILEL
                     DGEQVVKARPCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLC
                     GLEIPRRAAVIRMILLELNRIASHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKY
                     CGARLTHSSMRIGGVMLDLPENYLEEMLAFCDKFPNDLKDYEDLLDDNRIWRLRTENV
                     GVVTKEQALNWGCTGVMLRGSGIKYDIRKEEPYLLYNEVEFGVPYATQGDSYARYKVY
                     MQEFRESLKILRQCATLYKDTPPEILATHPEYVSASKEQILTQNYSLMQHFVLITQGL
                     KPPKGEVYVPTESPKGELGFFIHSDGTGRPYRLKARTPSYWHCAFFEEMLVGTYLADV
                     VAIMGNVNIVLGEIDR"
     gene            complement(14153..14947)
                     /locus_tag="RJ336_000932"
     CDS             complement(14153..14947)
                     /locus_tag="RJ336_000932"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HDZ5213389.1"
                     /translation="MMRKYSDKKNAQTQNYYKDRFYHAPHTVKSDVNESVFKDDFEVL
                     KTQVEILNSFVELDFWVIEIKKEDNVKTLQMLKTLGYLSFTEASAIDFIADKNGFEVF
                     YQLLNLEKKLRVRIKTFVGVKERLQSVAHIFKGANWSEREIYDMFGIFIINHPNLKRI
                     LMPDDWFGHPLLKTYPLKGDEFARWYEIDKIFGKEYREVVGEEQRDSGFADDKDTLNF
                     ARLYHEVPKGGQKKEISFKQEYQEDEGVAFVKKVKRDEAKILEKRR"
     gene            complement(14944..15447)
                     /locus_tag="RJ336_000933"
     CDS             complement(14944..15447)
                     /locus_tag="RJ336_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HDZ5213390.1"
                     /translation="MAEHQVNYASGLPVVLTSVDKLVQWGRSNSLWALSYGLACCAIE
                     MMAAGGSRYDFDRFGTIFRASPRHSEVMIIAGTLCKKHAEFTRRLYDQMPDPKWVISM
                     GSCANTGGMFNTYSTVQGVDRIIPVDIYVPGCAPRPESFQFALMILQKKIRKEKASRK
                     IAPKRLI"
     gene            complement(15429..15818)
                     /locus_tag="RJ336_000934"
     CDS             complement(15429..15818)
                     /locus_tag="RJ336_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase subunit 3"
                     /protein_id="HDZ5213391.1"
                     /translation="MSHIDASHPYFGIFLMLVLASVIFFGLVFLASKIGNNFAAKNRK
                     KLGLGIYECGPIPVKQANKINSQFFIIALIFILLDIEVVFLFPWALIFKDLGWFGLLE
                     VFVFIVLLGVGFLYAYKKGAFAWQSIK"
BASE COUNT         5954 a         2999 c         1898 g         5063 t
ORIGIN      
        1 aagaggtttt aaccttagat aactagccaa aaagctagtt atctctaaat ttacttattg
       61 atttaaaatt tgatttttac tcttacataa attctgccaa tttgaagcac ttttgatttc
      121 aagacattgt tttaaacttt ctttttcagc ttgtacattt tgcattcttt cataagttaa
      181 ggcttggata tataaagctc ttgctctatc ttcatctgaa agttttaatt taagtaaatc
      241 tgttaaaaca gctaaacttt cttcattttt attgatttta gtcaaagcat caagatatat
      301 aaattctaaa ttaggactaa aaagatttat acctttaaaa ttttgatagt caatggcctt
      361 aggtgcgtaa gttaaaatag ttgtttgcat attatgatca ttagcgtaag aaagtaaagc
      421 atcgtaggct tctaccatac taaaattcat tggaaaactt tctaaaattt gcaaaatttt
      481 aatggcttga ttgtagtcat ttaagcgcaa taaagataaa aattgcaaat aataagcctt
      541 aaaattctca tcatcacttt ttaaaattct agaattagct atgtctttag aaattttaat
      601 cacctgagga tattgtttat tgtcaaaaag aatagatgct ttttgaagac cataaaatat
      661 agaatcttca ttataatttt tatctatata atcaagtgct tgttcaacat tagaagttct
      721 gataagacaa gctaacattt gttttttatt ctcaattttc tgacctatat cataagcact
      781 aaaacgcata aaaatatttg cagcattgat acaattatca gcttttatcg cattttttaa
      841 atcattaatg gctgctttct ctaaaaattg agtagcattt ggaatttttt tactttctat
      901 aagatcttta taagctaaaa tagcactaaa atttccctct ttataataaa gtgcaacatc
      961 ttcatctaaa gctttatttg caatattctc atctttattt gcatattgct tcattaaatc
     1021 tgtataacgc tgatgcaaaa agcttgcatt attatcacct aaagcaaaga atacctcatc
     1081 acttgctttt ttaatttcat ctaaatactt accatctaaa taatcatcca tatataaatc
     1141 aaggtatttt ttagcatcac tagatctgtt agtatgtgat aaaactaagg ctaaatcttt
     1201 taaagtttct tcataacttg gatcaagttt tgacatttta gcaaaggcat cttcataaat
     1261 acttgcactt atatcaaatt gtcctttttg attaaataat ttagcaagtt ctaaagatct
     1321 tggaatatct tttccaaaat attcaggatt ggcttttaaa atggtattaa tatactctat
     1381 agctttattt acttgctcat ttgaaagcaa attctttgcc aaactcatag ctgctcttgc
     1441 agctaaatct aaattttttg tattaaaata agtattttca taaatattta cagctttttc
     1501 tttttcattt aaattataaa tatagtctgc ataatcaagt tttgataact gagtaaaata
     1561 attattaggt tgttcattat ccaaaatcga cattgtatac tctacatcag cacgctgagc
     1621 taaagcgata taagttctta acattatatg taaaacttct gaaaaatttt tatcacttgt
     1681 aaaagtacgc gtccaatttt tagcatcatc aatcatcttt tctaaaattt gttgatcacg
     1741 catacttgga tcttgagtgt aaagtttatt ttgagctctt aatttataaa gtataaattc
     1801 actagcaaaa atactgccac gatatctatt gatagcattt tgtgcatcaa tcacaacttg
     1861 attgtaatta gccttatcgt attctttttt gatgcgtaaa taagtattga tatctgcact
     1921 ttgaggaata acaacaggat cagaatttaa atctaaagct ccaacataag gcaaactctc
     1981 atgtggaaaa ttgatattaa aatcaagtcc atcatagtct ttaacgcgta ctagttctgg
     2041 tgtaaaaata aaagtaaaag ccttactttt atgcgaactt gatgaactga gttctttatc
     2101 tatataaata ttttgagaag tgtcaaacat tcttgcttgt atttttggca aaatgatcat
     2161 tttaattttt tgagcttctt gtataaattt taaatcaaaa gcagaaaaac tctgatcttt
     2221 taatttatta tcaaccatac ctgcaatatc acattcaaaa tgaacttttg cttcggtaat
     2281 aaatttttga catgtaaatt ctaaatcatt actcgcatgt aaaactgcaa aagcttgatt
     2341 attttcgcga cccgtattta aaacaagctc aaaagcaaaa gcatttaaaa aacttaataa
     2401 aattaaaaat aatattctca taaaaataat tatagcaaaa ctcttataac attaacaata
     2461 tagcaaaagt gcttacacaa acacaacaag ctaaaataaa attttgtata aaactaaact
     2521 taatattata aaccctatca tttttcataa ataaagcatg aattaaaatc tttaaatacg
     2581 cataaagcat aataacagaa gataaagcca caaaaagcgc caaataccaa tatccattta
     2641 aaattgctgt atttaaaatc ataaatttac cccaaaatac tccaaaaggc gggatacctg
     2701 ctaaagaaag cacactaatg cttaaacaaa aaacaattaa aggtttttta accaaaagcc
     2761 catttaaact ctcataagaa ttattctcat aattgcttaa aatcataaat acagcataat
     2821 ttgcaaaagc aaataaagtc caatatccaa aaatagcaag caaaattcca tcaaaatttt
     2881 gttcttttaa taaaggaatg caagctacca aaaccaaaga agaatgcact acagaactat
     2941 aagcaaacat ttttttgata ttgttttgac ttagagccgc aaaagcgcct ataagcatag
     3001 aaaaaatcgc tagaactatt atgatatatt caaaacctgt attatttaaa aaatcaaaca
     3061 aacgaataac cacaaccaac atggcaactt ttggcacaac tgaaataaaa gcaaccaaat
     3121 ttgtatgtgc tgcataatac acatctttaa gccaaaaatg aaaaggtgcc aaagaaagct
     3181 tgattgcaca aagaacaaaa atcatcactc cggcacccaa aagcatggga tctttttgaa
     3241 actcattttt taacgctaaa ttagcagata aatctaaagt tcctgttttt aaataaataa
     3301 aagctacagc cataacaaaa aacccagctc ctacagccgc tacactaaag tattttatcg
     3361 cacttgaaat agcattatca cttccacgca ttgctattaa agtataaagt gctaaagaag
     3421 aactttcaag tcctataaaa ataagcacta aatttgagct tgaaaccatc aaaagcaaag
     3481 atgcgatcat aaataaaaat aaagcataaa attcaccttg attttcttct ttttgcatta
     3541 aaagatataa aaatgaaaaa cacaaaatca ccaaaaaagc ataaaatgaa acaatatcat
     3601 tatttaaagt agccaaaaaa gcttttgctt ctaaaccttg agcatttgca ttatttaaaa
     3661 tcaaaaaagc acttacaatt aaagataaag aacttatacc gatataaaac gatcgatgaa
     3721 atttccaaaa accagagcaa agcaaaagaa ctattgcagt tgtaattaaa aataaaaatg
     3781 gataagataa gcttatattt aaaagttcta aatttaaaaa attatttaac atttgcctct
     3841 cctattttag ataaaaaatc taaagtattt tgctcaacag ctctaatatt cattgttttt
     3901 ataagattat ccacatcttt ttgtatgggc tttaaaagta tatttggcat aagccctagt
     3961 ccaaaaatca ttactataat gcacacaagc gctactattt ctctaaggcg taaagaaaaa
     4021 ttctctataa agctttgttt ttgcatgaaa aatatttttc taaatactgc gaacatataa
     4081 attgctccta aaataatcac caaacctgcc aacaaagcgt aaaataaatt aatctttgct
     4141 atacctaaaa gaattaaaaa ctctcccaca aaagaaacag ttaaaggcaa agaaacgctt
     4201 gcgagtaaaa ttaacataaa gaaaattgaa aataaaggtg cttttttggc caaagaatgg
     4261 taaaaagaaa tatcataagt atgatatctt tggtataaaa gttcaaccat taaaaataaa
     4321 gctcccgtta caataccgtg tgcaaacata taaaaaaccg caccgctaat acccaaagca
     4381 tttaaagaaa aaattcccaa aatcatcaca ccaagatgtg aaatagaact ataagcgatc
     4441 aattctttaa tattttctgc tctataagca attaaagcat tataaacgat actcactata
     4501 cataaagcta caattaaagg cataaaatac acactcgcat ctggaaaaag tggtaaacaa
     4561 aaaagcaaaa atccaaaagg agccatttta aaaactacaa gcattacaga aacaagaaca
     4621 ggcgaattta cataaacctt aggtgcccaa gtatgaagtg gaaataaagg agctttgata
     4681 gcaaaagcga taaaaaatgc tccaaaaagt aaaagttgct ctgtaaaatt tactgccgag
     4741 gcattatttt tccaaatttc taagtcaaaa gtgaagatgt ttaaaagttg ataatttaaa
     4801 taagcttgat aaatcaatgc tataagcatt aaaattgaac ccgcaaaagc atagataaaa
     4861 aatttcaccc ctgctctaaa atctttacca taaactccca taatataaag caaaggcaaa
     4921 agagaaaatt cccaaaaaac ataaaataac aaaccatctt ttgcactaaa aagtcccata
     4981 attgcaaatt ctaaaaagaa tatacaagat acaagtgctt tttgttccag ctttaaaaat
     5041 aaaaagctta aaaatatcat caaagaactt aaaagcatca atataagtgc gatactgtct
     5101 actcctacat gaaagctaaa aaatttcaaa attttaaaag aaagattata atcaaagctt
     5161 accccttgta aaaaatccgc aaaaatatcc aaatttaaag ccaaaatcat aaaacttaca
     5221 acaacgctaa aaaccttaac gcctccacga tttaaaagca aaaccacaaa agcagaaatt
     5281 aaaggaaaaa atatcaaata atttagcatt ttacaccatc cataccaaaa tcaacaaaat
     5341 cacaaaagct gccaccaaaa atctaagcat taagtttaag ctgtttggca taatcatttt
     5401 ttgtgaaata atttgagaat acaaagcaat tttttcaact attctatcaa aaatataaag
     5461 atcacaatgc tttaaaatcg cacataaact ttcatatttt gaaacgataa attgatgata
     5521 gaattgagga ataaaataat cattacttaa aagtttgtga attttatttt cttcaatact
     5581 ttctttaaac caagaatttt tataagcaaa aatagccaaa attacaccca aaatagctgc
     5641 tacactcgca caaatcatta caatttgatt ttgtgcatca ataaaaacta attttgtgct
     5701 taaatattca aaaaaactat gttcaaaaaa tcctgcaaca atagctaaaa ccatcaaagg
     5761 actcatagcc aaaagtgcga ttttacttgc ttcatgtgga tgttcattgt gtcttgcagg
     5821 ggtaaaaaat accaacatta aaagtctaaa gctataaaat gctgttaaaa aagctgcgat
     5881 taaaagcact aaaaaaatac catggtgaaa agaaatgaaa gaatatccta aaatcaaatc
     5941 tttagagaaa aatcctgcaa aaggataaat tcctgctaaa gctaaagatc ctatacacat
     6001 caaaatagcc gtaaatttta aaggtttaaa aagtccaccc atttttttaa tgtctaattt
     6061 atcattcata gcatgcatta catttccagc acctaaaaaa agtaaagatt taaaaaaagc
     6121 atgtgtagct aagtgaaata aagctatacc ataagcccca agtcctgcgg ccacaaacat
     6181 atatccaagt tgcgataagg tagagtaagc aataatacgt tttaaatccc tagccaccaa
     6241 agccatagag gctgcaaaaa tcgctacaaa agctccaagt aaggcaataa tataagaaac
     6301 ctcaggaact aaatcataaa gcgtgctagc acgaattacc aaataaaccc ccgctgttac
     6361 catggttgct gcatggatta atgcagaaac aggagttggc cctgccatag catcagcaag
     6421 ccaagtgtga aaaggaaatt gtgcagattt tcccatagct cctataaata aacaagttgc
     6481 gattaagatc aaagcattgt gatctaggct ttgtgccatg gaaaaaactt catcatattt
     6541 taaagttcct gcttgtaaat aaagccaaaa aattcctaaa agcataccca aatccgcaat
     6601 acgattcata ataaaagctt cattagctgc aaaagaataa gtatcgtttt tataccaaaa
     6661 acctatgagc aaccaagagc aaagcccaac gccttcccaa cctacgaaaa gtcctaagaa
     6721 attatcactc ataactaaaa aaagcataga aaagacaaaa agccccaaat aagcaaaaaa
     6781 tttattaaaa ccttcatcat gagccatata aaaaatacta taaaaatgca cacaagtagc
     6841 tacaatacct acaacactca tcatagtgag cgaaatggca tctatatcaa agccaaaatt
     6901 tactccagca aaccattcaa acaaactcac attaaaagct tcattgcaaa aaagcaaata
     6961 caaagaacaa aaagcactca aagctactaa aagtgaacaa attatcccta caaattgttt
     7021 tttctcactc aaagcaaaac aacttgcaaa caaaaaagct acaaaaggac taaaaagaga
     7081 aatcaaagct aaattttgca tgctaagcct ccacttcttt taagcttttt aattccaaag
     7141 tgccttttct tctataccaa agcacacaca aagctacacc aacagctact tcacaagctg
     7201 ctacacccat gataaaaagc gcaaaaacct gtccatttaa atcattgtgc attttagaag
     7261 ctgctactaa ggctaaatta gcactattta ataaaatttc actcgaaata aaaagcatga
     7321 tgagattttg tctttttaaa atccctacaa gccctatgac aaacattaaa atagctataa
     7381 aaaaatactt ttctatcatt gtttttcctt tgttagctct ttacgagcaa gcactatagc
     7441 acaaactaaa gcaatcaaaa gcaaaatagc tataaactca aaagctaaaa gatattttga
     7501 aaaaatcgct aaagccagtt gtttattaaa atcaaacaaa gcaggatcat ttaaaggcaa
     7561 atccgtgctg atattttggt atttaaaacc tataagcatg gccaaaagta aaatcgcact
     7621 taaaaccacc aaagtaaaaa aacttttttt agctttaagt tgttctttaa attctttaga
     7681 agcatcaaaa aacattatcg caaaactata aagtccaagc acagctccac tataaacaat
     7741 aatttgtatc acgcctaaaa actctgcatc aagtaaaaaa taaaatcccg ataaaaacac
     7801 cattccaccc gctaaagcag aaagagaata aagcatattt ttacttaaaa ccgcaatgcc
     7861 aaaaaaacct aaaaccacta cactaaaaaa tacaaaagcc aaattttcta tcatttgttt
     7921 tctccttgct cttgtgtgtc ttgattttct gaggctcttt caatcatcac atcgtaataa
     7981 tttggtgttt ttaccaccaa taaatcagca tcttttctaa ggcttcccgc tccttcaaat
     8041 tcaacttgat ttttaagctt atcaatagga gttaaaaaat cttgcttgta accaaaataa
     8101 gacctttgct cggccgcatt ttcatactct gtgccatgta ctatagcaag ttcaggacaa
     8161 acctcagcac aaaaaccaca ataaatacaa cgccctaaat taatactata atttcctact
     8221 tttttacgcc cattttcatc taaagaagtt tccattctga tacaattact aatgcaaatt
     8281 ttttcgcaaa gcccacaacc tatacatctt tcattttcgc tttctataaa acgcatcaaa
     8341 cgatgaacag cacggtaacg attatcaagc tttacctttt caaaaggata tttaatcgta
     8401 gcgctattat ttctcttaag taattctctc atcatcacaa aaagccctac aaaaagctct
     8461 agtttaacgc ttctacgcaa agcttgtgaa attttttccc aagcactaac aggagttttt
     8521 cttttctcat ctactaaata ataatttttc atatcaaact cctataaaag aactgccaaa
     8581 gcagtgatta aaaggtttaa aaccgccaaa gggattaaga ttaaatagca cattttcatc
     8641 acttgatctg gacgcaattg cggaaaagca gctcttgccc aaaaatacca aaagaaaata
     8701 aaacttgatt ttactatcat cataatccaa ccaggaataa tccaaaagct attaaaaccc
     8761 cctaaaaaca aaagagttac caaaatagct ccagctatca tagaagcata ttcacctatg
     8821 aaaaacatac cccatcttaa acccgaatac tccgttccat aacccgctac aatttcagca
     8881 tcattttccg tcaaacaaag cggagttcta ttagtctcta taaataaagc aattataaaa
     8941 agcacaaaag ccaagggctg tttaaaaata agccaagaaa aaaatccatc gctttgataa
     9001 ttgttaatat ccaccaaaga aaaagaacct acaagcatta caatagcaat caaagctaaa
     9061 gctcctacgc tttcatagga aataatcgct acaagccctc ttgcagcccc taaaatcgac
     9121 catttattat tacttgcaag tccacccaaa aacaccgcat aaaagcaaag tcctgaagta
     9181 ccaatgacaa aaagcaaagc tacattaata tctgccacta taggctgaat cacccttcca
     9241 aataaagtaa attcaggcaa catgggaata gctgctaaag aaacaaaagc acaaatagca
     9301 gaaattaaag gtgctatagc aaaaataaat ttttgcgaat ttgaagggat tatatcttct
     9361 ttagtaaaaa gttttatcat atcagctaca agttgaataa gcccaaaagg ccctaccata
     9421 tcaggcccta tacgtctttg aaaataagct aaaacctttc tttcagcata agttgcaaga
     9481 cctgctaaac tcgcaaatat tgcaatgata ataatacatt taattaaagc ctctaaagca
     9541 aaaaaagcaa aatcactcat ggtttgctcc taatttttct aaattcgcca caacaaatct
     9601 ttcatcaaaa aagcttagcg tatcaagttt ttcatcgaaa tacggcaaga aagctccatt
     9661 ttttatatcc ttatccacac gcacgctaag gcttaattct ttatctttta ttttaagttt
     9721 tacaagatct ttatctttta aatttttctc tttagctaaa ttttcactta cacctaaaaa
     9781 aatcacctca ttaatcgcac tagcacgatt tgaaaatcta ccaaattgat agctaggatt
     9841 agcgctataa agcaaaattt catcttcttt tgggtttaaa ttttcaaaat ttggagagat
     9901 gaattctttt ttagcaactt gtttaaaaca ttctaaatta agctcatatc cccttttaca
     9961 atcacctgca ttggtataaa aattatctaa atgatcaaaa tcaatcggag aaaaaccttt
    10021 atttataggg agtctcttag tataatttat agtatattcc tcatcaaaac ctaaagcatt
    10081 agccaaatca tttaaaaaat atcccttaaa ttctaaagca gcgttagttg gcaccactct
    10141 tttatcataa tttaaaaaag ttccttcttg ctgatttaaa ctcgcactag ctaaatttgc
    10201 atgctcttca taagaaaaac taaaatcacc tttttcattg tagcctaaag tcttgccttc
    10261 ttgtgtattt ttatccaaat cacaaatcat agccacacct aaggtattag tatgcgtagg
    10321 atttaaaaag actttaaaag gagtagtatt ttgaatcaaa gcaagtagtt tagcaagttt
    10381 tgtcgcattt ttatgaaaat aaaaatcact ccctataaca agagtaaaat ttgctttttt
    10441 aagcaataaa tcttctaatt tatcttcatc tatacctaaa tttttagcaa aaacagaacg
    10501 ttgcacttct ataatttttt ttactttttt aggtacgact ttttttactt ctttttggat
    10561 ttcattgcct tcttcatctt tttctatgac ttgttctaca acttcttcgt tgatactttc
    10621 ttctatttct ttattttcgc taacaaaaaa ctctgctaaa tgagttttaa taccttcatc
    10681 ttgactaaat ttttgaagta aaaaatataa aatttgctct tcatcgccac ttttatgaat
    10741 gtgtgagata aaatttttgg aatattttgc tatacccaca tcttccatag gatgaaaata
    10801 aagccctgag cctttattca tcactaaagc attattgatt ttatagctaa gcgttggagc
    10861 atcatatctt aaaagcattc cagccacaac caaaaaatca ctttttatta tatcttgagt
    10921 attggcacta taaaactcgc cagaattagc gataaattct tgtaaaaatt ctttaaattt
    10981 caaagcttct tcattgatca aagaaagatt aaatttcttt tttaaatttt gtaaaatcaa
    11041 agcttcttca ttggtaataa aactattaaa tttaatgttt ttaatttcat ttttctcaaa
    11101 aagtttcaca agttcttcaa aggctttttc atctttatcc gcctcatttt gcgtatcaaa
    11161 agcaaatctt gcagccttat ttaaactcgc aaaggcaaaa tcattactca cacgataaat
    11221 tttttctttt tgattactaa tgccgctttg cttaatatca taatacatca actcacaatc
    11281 gcttgaatgc ggatttgaag cagggattct tttaagttcc caaatatttg aagtgtattg
    11341 aaatttcgaa cctatcaaag ctcctgttgg acacacgctt gtacattctc cacaaaatga
    11401 acaatcaagc gtatcaccat ttgcagggcc tatcaaactt ttttgaaatt tagtccaaat
    11461 cgcataagca tcttttccca tgctctcttt aaagctatta tccacactat ctccgctacg
    11521 aggaacagtc tttaaagcac tttctccgat tttatcctta caaactgtaa tgcaacgctc
    11581 acatactatg caaagtgcgg gatcataatt aatcattccc caatgtttat gtggtttatg
    11641 tgtgtcttta atccaatgct tttgaacatt tacgcggctt ttatgagtga aattttgcaa
    11701 ttcacactcg cctgatttat cacaaactcc acattctaaa ggatgattga tacaataagc
    11761 ttgcatgatc tcatttcttt catcccaaag attttgcaaa tcactttcta caaccatgcc
    11821 ctcttttgct ttagtattac aagaatatac ctttttacca tcagcttcaa ccatacacat
    11881 acgacaagcc aaagtaggac tacagcctga aagatagcaa atcgctggaa taaaaatatc
    11941 atttcttctt gctatattta aaatatattc gccttcttca aaggcgcaat ctataccatt
    12001 aatcttaact gtcattttgc ttcctttatg cgaattggaa taaaatcgaa accattgttt
    12061 tcataattta aaaaagctat ggtgccttgt aaattttcat ctaaacaaag cttggcttta
    12121 agactaaaat ctttagccaa aatttcaact tcactttgat ctttgcattt tgcaatttgt
    12181 aaaaattgct ttgaacaatg taaattttta tcttgtaaat ttgctctaaa aagcactaaa
    12241 ccgtcataat tatctagttc ttttagggtg tttaatttgg cctttttaaa atcgcattct
    12301 tcttcatcgc tatctaaaat ctttaattca tattttacgc ttaagaaatt caaaaaatat
    12361 ttgatatttt cgctatcttt gtaagaatgg atatttttat ctataattaa atacttagcc
    12421 tctcttaaaa aagcaagcac ttcacctgct tcttcctctc caaaacaaga ttcagcactt
    12481 aaatatccct catctaaatc gctaaattgt ccttcatcgc ttaatttaca aagcaaagcc
    12541 aaaacaaaac tcaaacttgc aatttcacat ttataaaatt tagcttttaa atttttatct
    12601 tccaaacaag aaatattaat gctatttaca cctatttttt cacataaatt tttgttttta
    12661 aggcttagca tatctaaaaa acaaagagca ttatcataaa tcatactctc tcctttttta
    12721 taacaatagt ccaatctact tgattaaatt tcaaagaatt taaaagctca cagccttgtt
    12781 cttttataaa agaaaaactt ttttcaacag gagaaaaatc gccgatttca aaaagcacca
    12841 ctaaaacctc gccttgtttt gcttctttta tgatttgtgc taaatcttca aaaagttctt
    12901 tgctttttct taaatctatt cttctcatcg atctatctca cctaaaacta tatttacatt
    12961 acccataatg gctacaacat cagctaaata agtacctaca agcatttctt caaaaaatgc
    13021 acaatgccaa taactaggcg ttctagcctt taaacgataa ggtcttcctg tgccatcact
    13081 atggataaaa aagccaagct caccttttgg actttcagta ggcacataaa cttcgccttt
    13141 agggggtttt aaaccttgag tgattaaaac aaaatgctgc attaaagaat aattctgcgt
    13201 taaaatttgt tcctttgaag cacttacata ctcaggatgc gtagctaaaa tttcaggtgg
    13261 agtatcttta taaagtgtgg cacattgtct aaggattttc aaactttcac gaaattcttg
    13321 catataaact ttatatcttg cataagaatc cccttgcgta gcataaggca cgccaaattc
    13381 aacttcatta taaagcaaat aaggctcttc tttgcgtata tcgtatttta taccgcttcc
    13441 tcttaacatc acacctgtac aaccccaatt taaggcttgc tctttagtaa ccacacctac
    13501 attttcagtt cttaaacgcc aaattctatt atcatctaaa agatcttcat aatcttttaa
    13561 atcatttgga aatttatcgc aaaatgcaag catttcttct aaataattct caggtaaatc
    13621 aagcataacc ccacctattc tcatagaaga atgcgtaagt cttgcaccgc aatacttttc
    13681 tatcaaatcc aaaacatact cacgttctct aaagcagtat aaaaacacac tcatcgcacc
    13741 aatatcaagc gcatgagtgg caagccaaag caaatgtgat gcgatacggt ttaattctaa
    13801 aagtatcatc cgtatgactg ctgcacgacg tggaatttct aaaccacaaa gtttttcgac
    13861 cgccgcacaa taagcataat tatttgctga agcagcgata tagtccattc tatcagtagt
    13921 aggaataaat tcttgataaa tcatattttc agccattttt tccataccac gatgcatata
    13981 acctatacaa ggacgcgctt ttacaacttg ctctccatca agttctaaaa taagacgtaa
    14041 atttccatgt gctgaagggt gttgagggcc taagttgata atcatttttg agtcttcttg
    14101 ctcaaaagct atattttcat aataaggttt taacttgcta ggaatttgca ttttaacgcc
    14161 ttttctctaa aatttttgct tcatcacgtt ttactttttt tacaaaagcc acgccttcat
    14221 cctcttgata ttcttgttta aaggaaattt ccttcttttg accacctttt ggcacttcat
    14281 gataaagtct tgcaaaattt agcgtatctt tatcatcagc aaaaccagaa tctctttgtt
    14341 cttcgcccac tacttcgcgg tattctttgc caaaaatttt atcaatctca taccatcttg
    14401 caaactcatc gccctttaaa ggataagttt ttaaaagcgg atgtccaaac caatcatcag
    14461 gcattaaaat gcgttttaaa ttgggatgat ttatgatgaa aattccaaac atatcataaa
    14521 tttctctctc actccaattt gctcctttaa aaatatgagc cacgctttgc aaacgctctt
    14581 ttacgcctac aaaagttttt attctcactc ttaatttttt ttctaaattt aaaagctgat
    14641 aaaacacttc aaaaccattt ttatctgcta taaaatcaat agcacttgct tctgtaaaac
    14701 ttaaataacc taaagtttta agcatttgca aggttttaac attgtcttct tttttgattt
    14761 ctattaccca aaaatcaagc tctacaaagg aatttaaaat ttctacttga gtttttaaaa
    14821 cttcaaaatc atctttaaaa acactttcat taacatcaga ttttacagtg tgtggtgcgt
    14881 gataaaatct atctttgtag taattttgag tttgagcatt ttttttatcg ctatactttc
    14941 tcatcatatc aaccttttag gtgcgatttt acgacttgct ttttctttgc ggatcttttt
    15001 ttgcaaaatc atcaaagcaa actgaaaact ttctgggcgt ggagcacagc ctggcacata
    15061 aatatctaca ggtataattc tatccactcc ttgaacagta gaataagtat taaacatacc
    15121 gcctgtattg gcacaacttc ccatagaaat cacccattta ggatcaggca tttgatcata
    15181 aagtcttctt gtaaattcag cgtgtttttt acataaagtt cctgcgataa tcatcacttc
    15241 actatgacgt ggtgaagctc taaaaatcgt tccaaatcta tcaaaatcat atcttgaacc
    15301 cccagccgcc atcatctcaa tcgcacaaca agcaagtcca taagataaag cccataaaga
    15361 attactccta ccccattgaa ctagtttatc aacgctagtt aaaactacgg gcaaaccact
    15421 tgcataattt acttgatgct ctgccatgca aacgctcctt ttttataagc atataaaaat
    15481 ccaactccta aaagtacgat aaaaacaaaa acttctaaaa gtccaaacca acctaaatct
    15541 ttaaaaatca aagcccaagg aaataaaaac acaacttcta tatctaaaag tatgaagatt
    15601 aaggcgatga tgaaaaattg agagttaatc ttgttagctt gtttaacagg aataggaccg
    15661 cattcataaa ttccaagtcc taattttttg cgattttttg cggcaaaatt attaccgatt
    15721 tttgaagcta aaaaaaccag tccaaaaaaa ataacactag caagtactag cattaaaaaa
    15781 ataccaaaat aaggatgcga agcatctata tgagacattt attctccttt tttaaagcac
    15841 tttaatcact ccacaacaaa aattaaattt acacttttct ttattttact ctaaactttc
    15901 tatattgaaa ctta
//
LOCUS       DAPWGO010000033        15243 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.034, whole genome shotgun sequence.
ACCESSION   DAPWGO010000033 DAPWGO010000000
VERSION     DAPWGO010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15243
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.034"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..1375
                     /gene="cas9"
                     /locus_tag="RJ336_000935"
     CDS             <1..1375
                     /gene="cas9"
                     /locus_tag="RJ336_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344900.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HDZ5213392.1"
                     /translation="KEQKEFCAYSGEKIKLSDLQDEKMLEIDHIYPYSRSFDDSYMNK
                     VLVFTKQNQEKLNKTPFEAFGNDSTKWQKIEVLAKNLPTKKQKRILDKNYKDKEQKDF
                     KDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDIQKGSKVHVEAKSGMLTSAL
                     RHTWGFSTKDRNNHLHHAIDAVIIAYANNSIVKAFSDFKKEQESNSAELYAKKISELD
                     YKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEFYQSYGGKE
                     GVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFALKVLPNKAV
                     VQGKDKKSGLIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPELVYFNAFTSSTVSL
                     IVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVTKAEFR
                     QREDFKK"
     gene            1372..2262
                     /gene="cas1"
                     /locus_tag="RJ336_000936"
     CDS             1372..2262
                     /gene="cas1"
                     /locus_tag="RJ336_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HDZ5213393.1"
                     /translation="MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINII
                     ILESLQASLSSALFNAFAKHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQINVSA
                     QKKAILWQKIIKNKILNQAFVLKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYF
                     KTLFGVSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALC
                     DDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYV
                     ANFKNALLYEDELKIVKFDD"
     gene            2255..2686
                     /gene="cas2"
                     /locus_tag="RJ336_000937"
     CDS             2255..2686
                     /gene="cas2"
                     /locus_tag="RJ336_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HDZ5213394.1"
                     /translation="MIEDKFMRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFS
                     VYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNE
                     TNLTLFDIDSHGEFKYKNSNNEEIQINKKQEKYHQQNLFEF"
     repeat_region   2831..3196
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=2831..2866
                     /rpt_unit_seq="attttaccataaagaaatttaaaaagggactaaaac"
     gene            complement(3314..4504)
                     /locus_tag="RJ336_000938"
     CDS             complement(3314..4504)
                     /locus_tag="RJ336_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDZ5213395.1"
                     /translation="MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKALKN
                     QPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSD
                     TLVPVENVRVENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTRLNYSEIALLAEL
                     GFFHIGVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFP
                     LLKDDEKATFSTLKSALQSCDILITTGGVSMGDFDFLKKAVKEYEIIIDKADIKPGRH
                     IKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTP
                     YLEFVACNVEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEILENESLVDI
                     IFMP"
     gene            complement(4508..4954)
                     /locus_tag="RJ336_000939"
     CDS             complement(4508..4954)
                     /locus_tag="RJ336_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HDZ5213396.1"
                     /translation="MKHFTLYQGSLDIPKIYSQWYEFAKNKNCGALLTFCGIVREEGG
                     IEALSFDIYEPLLKKWFDEWQKRVDFDGISLLFAHSIGDVAVHESSYFAGILSKQRKL
                     GLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG"
     gene            complement(4955..5176)
                     /locus_tag="RJ336_000940"
     CDS             complement(4955..5176)
                     /locus_tag="RJ336_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HDZ5213397.1"
                     /translation="MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAV
                     SLNDEIIFDENTKLKDGDKIALLPPVCGG"
     gene            complement(5178..6719)
                     /gene="cueO"
                     /locus_tag="RJ336_000941"
     CDS             complement(5178..6719)
                     /gene="cueO"
                     /locus_tag="RJ336_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HDZ5213398.1"
                     /translation="MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTS
                     FINFASKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKT
                     LFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAG
                     EERIYRFEIPQDSAGTYWYHPHPHYTTSKQVFMGLAGAFVIKAKKDALSHLKEKDLMI
                     SDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLN
                     LRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGEFKLESAYYDRDK
                     MMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGK
                     SESELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFEL
                     ISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGN
                     LEVKE"
     gene            6843..7991
                     /gene="nspC"
                     /locus_tag="RJ336_000942"
     CDS             6843..7991
                     /gene="nspC"
                     /locus_tag="RJ336_000942"
                     /EC_number="4.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxynorspermidine decarboxylase"
                     /protein_id="HDZ5213399.1"
                     /translation="MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFA
                     FSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVF
                     NSLAQFHKFQSKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAI
                     EGLHFHALCEESADALEAVLKVFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIVL
                     CKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIM
                     PYTSEVLNARILATRENEKISDLKENEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKI
                     IFLDQIHYTIVKNTTFNGIRLPNLMLLDHKNELQMIREFSYKDYSLRN"
     gene            8294..9007
                     /locus_tag="RJ336_000943"
     CDS             8294..9007
                     /locus_tag="RJ336_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HDZ5213400.1"
                     /translation="MEALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTM
                     QECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENS
                     NPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINK
                     NIDEFLGDVFMNKNANLYKEISSIALAFMEFERFCFEVEKPVKINSKKVQNDLSRSEF
                     LRREANKQRRTREKSQGIS"
     gene            8982..9173
                     /locus_tag="RJ336_000944"
     CDS             8982..9173
                     /locus_tag="RJ336_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HDZ5213401.1"
                     /translation="MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKK
                     KEVLFQRSANWENYYIKAE"
     gene            9173..9715
                     /locus_tag="RJ336_000945"
     CDS             9173..9715
                     /locus_tag="RJ336_000945"
                     /inference="COORDINATES: protein motif:HMM:NF016750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HDZ5213402.1"
                     /translation="MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELK
                     EAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMV
                     RSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKMSNEQAY
                     YVRKFAAFFGTNNVDHQARI"
     gene            9764..11977
                     /locus_tag="RJ336_000946"
     CDS             9764..11977
                     /locus_tag="RJ336_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HDZ5213403.1"
                     /translation="MTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIV
                     VDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREE
                     AAKWTAEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQ
                     MVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYE
                     WLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQ
                     QVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQW
                     RFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRS
                     IGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTD
                     IEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQE
                     KEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDL
                     VQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYL
                     TRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHF
                     TGVMQGVDLTHNFPKGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK"
     gene            11974..12615
                     /locus_tag="RJ336_000947"
     CDS             11974..12615
                     /locus_tag="RJ336_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDZ5213404.1"
                     /translation="MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIR
                     RRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCG
                     YCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVP
                     VCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL"
     gene            12612..13544
                     /locus_tag="RJ336_000948"
     CDS             12612..13544
                     /locus_tag="RJ336_000948"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HDZ5213405.1"
                     /translation="MRKVFVTLLLSVVSLFAYGSERMGQDTQIWDFHRITNIPNYDTF
                     GKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHF
                     IAAISWVILVPTGFVMMFGATFGGGLFVRVCKNLHAFATVLFIISIIPMFLWWIKRML
                     PASYDIRWMMIVGGYLSKVKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDF
                     NSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYK
                     EEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI"
     gene            13711..14493
                     /gene="fdhD"
                     /locus_tag="RJ336_000949"
     CDS             13711..14493
                     /gene="fdhD"
                     /locus_tag="RJ336_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDZ5213406.1"
                     /translation="MDPLFTTQILKYKGDDSFTCDDTLVREIKLEIFINDERVGALMA
                     TPVDEQALAIGYLMSENIIAKVSDIESIETKDDGMSVHIKAKIDKENLAKLNAEGVVI
                     SGCGRAHTANIDPEAIEASKISSDVKFSKDEILKQMSTFYTQCELYEKTGCVHTAKLF
                     VDEKTFFIGEDIAQHNTIDKALGKARLAGVDLSQCFLMVSGRLSSEMVAKAVMHKIPV
                     LVSRTAPTCLGVMIARKFDLTLCGFARENKINIYSGEFRIHG"
     gene            14486..15223
                     /locus_tag="RJ336_000950"
     CDS             14486..15223
                     /locus_tag="RJ336_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HDZ5213407.1"
                     /translation="MDKNQEKEIISYMRELLNSNEKLDCGTAFKIAKKFNVNIEKIGQ
                     LADENHMRIDNCELGQFGHLDFEKAKIEVLKKIEPSLDEKRRIFCKDARDIAKEGCGL
                     KSMRSALKAYKVDVKYCQLGCFKEKKGKQFIVRTKTWIENADGDLLFGRGKTELLELI
                     GQTGSLLHASKLMGINYKKAWMHLQTLQKNSQEILVSTRQGRSKESGTKLTPRALELM
                     ENYSILQKDIEEYANKRFKELFLKGKK"
BASE COUNT         5311 a         2071 c         2784 g         5077 t
ORIGIN      
        1 taaagaacaa aaagaatttt gtgcttatag tggagaaaag attaaactta gcgatttgca
       61 agatgaaaaa atgcttgaaa ttgaccatat ttacccttat tctagaagtt ttgatgattc
      121 ttatatgaat aaggttttag tttttaccaa gcaaaatcaa gaaaagctta ataaaacccc
      181 ctttgaagcc tttggcaatg atagtacaaa atggcagaaa attgaagttt tagcaaaaaa
      241 tttgcctact aaaaagcaaa aaagaatttt agataaaaac tataaagaca aagagcaaaa
      301 agactttaaa gatagaaatc taaacgatac tcgctacatc gcaaggcttg ttttaaacta
      361 tactaaagat tatttagatt ttttaccttt aagcgatgat gaaaatacaa agttaaatga
      421 catacaaaaa ggctcaaaag tgcatgtaga agcaaaaagc ggtatgctaa catcggcttt
      481 aagacacact tggggcttta gcactaaaga tagaaataat catcttcatc acgccatcga
      541 tgcggtaatt atagcttatg caaacaactc tatcgtaaag gctttttcag attttaaaaa
      601 agagcaagaa agcaacagtg cagaacttta tgcaaaaaaa attagtgaat tagattataa
      661 aaacaaaagg aagttttttg agccttttag tggttttagg caaaaggttt tagataaaat
      721 tgatgaaatt tttgtctcaa aacctgagag aaaaaagcca agcggagcct tacacgaaga
      781 aacatttaga aaagaagaag aattctatca atcatacggc ggaaaagaag gagttttaaa
      841 agccctagag cttggtaaaa tccgcaaagt aaatggtaaa attgttaaaa atggcgatat
      901 gtttagagtg gatattttta aacacaaaaa gacaaataaa ttttatgctg tgccaattta
      961 tactatggat tttgctttaa aagtattacc aaataaagcc gtggtgcaag gtaaagataa
     1021 aaagtcaggt cttataaaag attggatttt aatggatgaa aattatgagt tttgcttttc
     1081 tttatacaaa gatagtttga ttttaattca aactaaagat atgcaagagc cagaacttgt
     1141 ttattttaat gcttttacaa gctctactgt tagtttgatt gtttcaaaac acgataataa
     1201 atttgaaacg ctaagcaaaa atcaaaaaat attgtttaaa aatgcaaatg aaaaagaagt
     1261 aatcgcaaaa agcataggaa ttcaaaatct aaaagtattt gaaaaataca tagtttcagc
     1321 acttggagaa gtgacaaagg ctgagtttag acaaagagaa gattttaaaa aatgagttac
     1381 gatgaagctt ttaaaacact gcttattagc tctaatgcca agctaaattt agagctaaat
     1441 catcttgtga ttaagcaaga tgaaaatata gccaaattgt ttttaaaaga tataaatatc
     1501 atcattttag aaagcttaca agcaagcctt agttccgcac tttttaacgc ttttgcaaag
     1561 cataaaatca tcttgctaac ctgcgatgaa actcatagta taaatggtgt ttttactcct
     1621 tttttagggc attttcaaag tgcaaaaatc gcaaaagaac aaataaatgt aagtgctcaa
     1681 aaaaaggcta ttttatggca aaaaatcatt aaaaacaaaa tcctaaatca agcctttgtt
     1741 ttgaaaaaac acaataaaat agagcaaagc aatgagctta taaatttggc taaaaaagta
     1801 agcttaaatg atagtaaaaa tatcgaagct gttgcggcgg cgctttattt taaaactttg
     1861 tttggtgttt ctttttcaag agatgagctt tgctttgaaa attctgcttt aaattatggc
     1921 tatgcaatca ttagggcttg tattattaga gcagtttgta taagtgggct tttgccttgg
     1981 cttggcataa agcacgataa tatttataat tcttttgcgc tttgcgatga tttgatagaa
     2041 gtgtttaggg ctagtgttga tgattgtgtt ttaaagctta agggtgaaag tgagttttta
     2101 agcaaagatg acaaaagagc gttgattggc aatttgcaaa gcaaaatcaa ttttgatggg
     2161 caaaattatc ctttaaacag agcgataaat cattatgtgg caaattttaa aaatgcttta
     2221 ttgtatgaag atgagctaaa gatagtaaaa tttgatgatt gaagataaat ttatgcgtgt
     2281 gcttttgatg tttgatgtgc caactaaaag taaaaaagag caaaaactag caagtaaatt
     2341 tagaaacaat cttataaaat taggttattt tatgttgcaa tttagcgttt atatgcgtat
     2401 ttgcaagggt ttaagttctg caaaaagttc tattgaaaat gtaaaaaaga ttttgccacc
     2461 ttatggaaat gtaagggctt taatcatcac tgaaaagcag tttgataaaa tggagctttt
     2521 gcttggtggc atagttttta acgaaaaagt taataacgaa accaatttaa cgctttttga
     2581 tatagatagt catggagaat ttaaatataa aaattcaaat aacgaagaaa ttcaaataaa
     2641 caaaaaacaa gaaaaatatc atcagcaaaa tttatttgaa ttttaaaagc ggttttaggg
     2701 gattgtaacc ccgcagagtc ccgcaaactc tttattttag tcccttttta aatttcttat
     2761 gagattatag cataattttt gctatttttc atgaaaaaac cccgaaattt tcattatctg
     2821 gtaaatatct attttaccat aaagaaattt aaaaagggac taaaacttct atatctccta
     2881 ccattccgca acctgtattt taccataaag aaatttaaaa agggactaaa acatatcaca
     2941 taaagcatcc gctctttcta aaattttacc ataaagaaat ttaaaaaggg actaaaacaa
     3001 ttattataag taaaattgag attaaaatat tttaccataa agaaatttaa aaagggacta
     3061 aaaccagtct cattttttat aacttgcctt gtagatttta ccataaagaa atttaaaaag
     3121 ggactaaaac gacttttaaa taacccgcaa ttatctaatt attttaccat aaagaaattt
     3181 aaaaagggac taaaaaaccc tagtggattg aaactctgct agggctaatt acttcactaa
     3241 aaggaggttg ccaatttgaa acttattgaa atttagggtt gattaaaatc gaaataaaat
     3301 tatttaaata attttaaggc ataaagataa tatccactaa actttcattt tctaaaattt
     3361 cacattcttt tggtaccacc ataagggcag ctttattgtt aagattgttt ataatcgcac
     3421 tagagccttc tttcttacct tcaagattgg ctaaaatgcg tccattttta aattccacat
     3481 tacaagcgac aaattccaaa taaggtgttt ttttcttgta acttccttgt aaaaaggcct
     3541 tgcaaatata gtctttaggt tgaagtaacc aagagtttaa aatctctctt gcgtaaagat
     3601 taaacattac catagccgag taaggaaaac ctggtaaggc gatgatgaat ttttcattag
     3661 ccttggctat tttgatatgt ctacctggtt ttatgtcggc tttatcgatg atgatttcat
     3721 attcttttac agcttttttt aaaaagtcaa aatcccccat agaaaccccg cctgttgtaa
     3781 tcaaaatatc acaactttgc aaagcacttt taagggtaga aaaagtggct ttttcatcat
     3841 cttttaaaag aggaaaaacc cttgtatcgc aatttaaatt tttagctaaa ttagctatgg
     3901 cgatatgatt tgaagagcgg atttgagcag gattttccaa ggcttctcct agatctttta
     3961 tctcacttcc actgcttaaa acccctacaa taggctttat aaacacacca atgtgaaaaa
     4021 atccaagttc agctaaaaga gctatttcgc tataatttaa ccttgtgcct tttttgagta
     4081 aaatttcatc ttttttatag ttttctccta ccgcacgcac ggcaaaagct tggggaactt
     4141 ttttttctat aaaaagagta tcattttcta cgcgtacatt ttcaacaggg actaaagtat
     4201 cgcttccttc gctcatgagt gagcctgtaa aggtttttac acaagtacca ttttgcacgc
     4261 taaattgtgg catagtgcct gcaggtgtga ggcctaaaat ttttaaaggc ttatcttgat
     4321 cttcaaattt gatcgcataa ccatccatag ccgaagttgg aaattcaggc tgatttttaa
     4381 gggcttttat gtcttgagct aaaatgcgtc ctaaacactc tgtaagagct attttttcaa
     4441 tcttttcata agttttgata tgagagtgta aaatttttaa actttcttca taagacatta
     4501 acatttttta tccttttaaa agtcctgcac cgcaaagttt ggttgatctt tctttggcat
     4561 aaattctttc tttgtttatc acatcatact tccaaatggg tgcgcttgct ttaaaatctt
     4621 caacaaattc attaaggagt ttaagcccta attttctttg tttgcttaaa attcctgcaa
     4681 aataagagct ttcatgaacc gccacatcgc ctatagagtg agcaaaaagc aagctaatac
     4741 catcaaaatc tactcttttt tgccactcat caaaccattt ttttaaaagc ggttcataaa
     4801 tatcaaaact aagtgcctca atgcctcctt cttcacgcac aataccacaa aaagtcagca
     4861 aagcaccgca gtttttattc ttggcaaatt cataccattg gctataaatt ttaggaatat
     4921 ctaaagaacc ttgatagagt gtaaaatgtt tcatttaacc cccacaaact ggcggtaaaa
     4981 gtgctatttt atcaccatct tttaacttag tgttttcatc aaaaatgatt tcatcgttta
     5041 aagatacggc acaaagttct agccattctt ttaaactctc atctttttgc aaaatttctt
     5101 ttaattcttt taaatttttt acttcaagtt ctaaattttc tttatttata gggcctaaaa
     5161 attccacttt taccatttta ttcctttact tctaaatttc ccatcattcc taaatcttca
     5221 tgttctaaaa tatggcaatg atacattcta agtcctttaa aatcttgttt cattctaagt
     5281 cttaactctt cattaggacg cacatttata gtatctctta aggctctaaa ttcagctttt
     5341 tgaacttttc cattgagttt tgatgagatg agttcaaatt gcgtgccgtg tatgtggaaa
     5401 ggatgatcca tgtgagattt atttatcact atccagtctt caactactcc aagtttggag
     5461 cttaaatcaa tgcgttttaa atcatagctt ttgccattga ttaaaaacat agacgcaaga
     5521 gcgattttta attcgctttc actttttccc atcataccat gcatttgcat atgatcttca
     5581 ctcatgatta tttctttaaa ttccttaggt tcttctgaag gtttgaaaat ttttaaattt
     5641 tttggaagtt ctacattttc tttttttagg ttaatattgg ctagaaatag ggtattaggt
     5701 tcttctttta ccatcatttt atccctatca taataagcac tttctagctt aaattctcca
     5761 tcttttggag cgtcgattaa aacttctacg cgagaagcag gacttaaaaa aagttcttct
     5821 ttataaatag ctttttctat aagtccacca tcagtaccaa caagtataaa cttagctcct
     5881 tgtatgcgta aatttaaata tcttgccgca gtagcattat aaatgcgtat gcgttcgttt
     5941 gtggcgagtt tgattttagg tttaaattgt ccattgatga gtacaaattc tccttctcta
     6001 ccatttagcc aatcatttag gttgttgttt ggaatttgag cgttttcatc aagacgcaaa
     6061 tcgctaatca tcaaatcttt ttcttttaaa tgacttaaag catctttttt tgctttgatc
     6121 acaaaagccc ctgctaaacc cataaaaact tgtttagaag tggtataatg agggtgtgga
     6181 tgataccagt aagttcctgc gctatcttga ggaatttcaa aacgatatat tctttcttct
     6241 cctgctaaga taggatcatg tgggcttcca tcttgatcag gtggcacagg aacgccatgc
     6301 caatgtatag ttgtagcttc tttgagtttg tttttgacta aaatttcaag tttatctcct
     6361 tcaaaaactt ctatttttgg agcaggtact agaccattgt aagtataaaa taaggttttt
     6421 ttacctttga taagctctat atgattttct ttgatttcta gggtagcacg aaaaatattt
     6481 ttttctttac tttcattttt gagtaaaggt aaggctttta aaatttctcc ttgggggaat
     6541 tgttttggat ctaaaagctt taaatttttt gaagcaaagt ttataaaaga agtatctaag
     6601 tcatgattta tagaatgatt tttatgcatg gagtgcatat cgtgcatagg atttgcatag
     6661 gctacaccca tacttgctag agtaagtgca ttaaatttta aaaaatttct tctattcatt
     6721 agtttttcct tttgcttgat tttttgtatt atagtcatta tttttttagt tttagtaaat
     6781 atttattttg aaaatttggt ttaattttgt tatgatttta gcaatttaat caaggaaaaa
     6841 taatgtttta tgaaaaaatt caaaccccag cttatatttt agaagaagat aaattaagaa
     6901 aaaattgcga gcttttagca agtgttggcg aaaaaagtgg tgctaaagtg cttttagctt
     6961 taaaaggttt tgctttttca ggagcgatga aaattgttgg agaataccta aaaggttgta
     7021 cttgtagcgg actttgggaa gcaaaatttg ctaaagaata catggataaa gaaattcata
     7081 cttattcgcc tgcttttaaa gaagatgaaa taggtgaaat agccagttta tctcatcata
     7141 tagtgtttaa ttctttagct caatttcata aatttcaaag caaaacacaa aaaaattcct
     7201 taggtcttcg ttgtaatgtt gaattttctc tagccccaaa agaactttac aatccttgtg
     7261 gaagatactc aagacttgga attcgtgcta aagattttga aaatgtggat ttaaatgcta
     7321 tagaaggact tcattttcac gcactttgtg aagaaagtgc tgacgcttta gaagctgttt
     7381 taaaggtctt tgaagagaaa tttggtaaat ggatagggca aatgaaatgg gtgaattttg
     7441 gaggaggaca tcacatcact aaaaaaggct atgatgttga aaaacttatt gttttgtgta
     7501 aaaatttcag tgataaatac ggtgtgcaag tttatcttga accaggtgaa gcggtaggtt
     7561 ggcaaacagg aaatttggtg gctagtgtag tagatatcat agaaaatgaa aaacaaattg
     7621 ctattttaga tacttcaagc gaagcacata tgccagatac tatcatcatg ccttatacaa
     7681 gtgaagtttt aaatgctaga attttagcca caagagaaaa tgaaaaaatt tcagacttaa
     7741 aagaaaacga attttcctat ttgcttactg gaaatacttg tttagcgggt gatgtaatgg
     7801 gagaatacgc ctttgataaa aagcttaaaa tcggcgataa aattattttt ttagatcaaa
     7861 ttcattacac cattgtgaaa aacacaactt ttaatggtat aagacttcca aatctcatgc
     7921 ttttagacca taaaaatgaa cttcaaatga taagagaatt ttcttataag gattattctt
     7981 taagaaatta gtattattta taatttgcat aaaatgttaa ttttacttgg aaaaaatcaa
     8041 agacataaat tttatacaaa gtattttatt ttttcaaata taaaatcaac ttaaatatct
     8101 aatttttaat actttggtat gattttttaa gattttaagt ccttatagaa ttttattgaa
     8161 attcagtgat ttttaaatca aatagtatta agataaatcg atttaaaaat cggctttaaa
     8221 atgaatatta ggtatatttt gcataatatt cattcaagca aaatttaaag ctatttttga
     8281 aaattttgaa tgcatggagg ctttaatgga tttggaaaaa ttaagattag ctagaagtct
     8341 ttattatcaa tgtctaggag agctttttgt tttttcattt tctgaagaaa gattgtcaaa
     8401 attacaagag tatttaaaga caatgcaaga atgtttattt gatgaaaatt taaaatcaaa
     8461 ttttgatatc ttgctcaagc atttagatga tgaaaattct atacaagcat tttttaaaga
     8521 atatgatttg ctttttttaa gtcttaaaaa tagcattcca acgacttttt cttacataga
     8581 agaaggtttt gaaaattcaa atcctttact ttgtgtgcgt caaattttag tcaaaagtaa
     8641 aataagacgc aatgaaaaat tttttaaaga aagtgaagat agtgttggat tttgtttatt
     8701 gttgatgagt gaatttttaa ggcaaaatga agatgattta gccaaagaac tttttgaaaa
     8761 agtgatcaat aaaaacatcg atgagttttt aggtgatgtt ttcatgaata aaaatgcgaa
     8821 tttatacaag gaaatttcaa gtattgcatt ggcttttatg gaatttgaaa gattttgctt
     8881 tgaagtagaa aaacctgtaa aaataaattc taaaaaagtg caaaacgatc tatcgcgttc
     8941 agaattttta agaagagaag caaataaaca aaggaggact cgtgaaaaat cgcagggaat
     9001 ttcttaaaaa atccgctttt gccttagggg ctgctggagt gcttggtagt acgactttag
     9061 ctctagctaa agatgaagaa agaaaagatt tagttaaagg taaaagtaag aaaaaagaag
     9121 tgctttttca aagaagtgct aattgggaaa attattatat aaaggctgag taatgtcaag
     9181 tgtaggtgaa aatatcaagc ttacgcgtcg ttcttttctt aaaatggcag cactttcaag
     9241 cctagcaaca ccgttgcttg ctagaagtga aactttaaga gaagcgagtg ctgatgagct
     9301 taaagaagcg tatgaaggta gtaaaaaagt aaaaacagtt tgtacagcct gttctgtagg
     9361 ctgtgggatt attgcagaag tgcaaaatgg tgtttgggtg cgtcaagaaa ttgctcaaga
     9421 tcatcctgtg agttcaggtg gacattgctg caagggatct gatatgatcg atatggtgcg
     9481 ttcacatgtg cgtttaaaat atcctatgaa aaaagaaaat ggagaatgga aacgcataag
     9541 ttatgagcaa gctttaagtg agatcggaga aaaactagct gcttatcgta aagaaaatcc
     9601 tgaaagtgtt atgtttttag gttctgcaaa aatgagcaat gaacaagctt attatgtacg
     9661 taaatttgca gcgttttttg gaacaaacaa tgtagatcat caagctagaa tttgacacag
     9721 cgcaacagtc gccggtgtgg cgaatacatt tggttatggc gctatgacaa accatcttgg
     9781 agacattcaa agaagtaaat gtatcattat cattggggca aatccagcgg taaatcatcc
     9841 tgtgggtttt agacatttct taaaagcaaa agaaaaaggt gcaaagctta tcgttgtaga
     9901 tcctagattt acaaaaagtg cagcaaaagc ggatatttat gcaagaattc gtccaggaac
     9961 tgacattgct ttcatgtatg gaatgctaaa aatcatcttt gatgaaggtt tagaagatac
    10021 aaaatatctt gatgaaagag tttttggaat cgataaaatt cgtgaagaag cggcaaaatg
    10081 gacagctgaa gaggtggaaa atgttacagg aatttctaaa gaacttttgg tgcaaatcac
    10141 tcacgaagta gctaaaaaca aaccaactac gcttatttgg gctatgggtt taactcaaca
    10201 cactgtagga acttcaaata cacgtttagc acctattgtg caaatggtac ttggaaatat
    10261 aggtaaattt ggtggtggag ttaatatctt acgcggacat gataatgttc aaggtgcttc
    10321 agatatggct tgtttgagcg aaaatttacc aggttattat cctttaaatg aagcgacttg
    10381 gagatactat gccaaaattt ggggtgtgga ttatgagtgg cttttaggaa attttgtaag
    10441 caaagattgg atgcataaaa ccggactttc acttgctaga tggtgggcag cggctttaaa
    10501 tggaaaagat ggaaatgatg ctatcgataa cgcaggaacg cctttaaaag ctttagtagt
    10561 tatgggaaat ggtatcactt cgactgcaca acaagtaaaa gttaaagaag gtttggaagc
    10621 tttagagctt ttagttttag ccgatccttt tgtaaatgaa gcaggcatta ttgcagaaag
    10681 aaaagatgga atttatcttt tacctgcagc aacacagttt gaaacaagcg gaagtgtaac
    10741 agcaacaaat cgtagcggac aatggagatt taaagttgta gatccacttt atgaaagcat
    10801 ggaagatcaa gaaattttat ttgagcttgc taaaaaatta ggtttttatg aagactttac
    10861 caagacttta cgcgatgaaa aaggtgagat tgtttggcct gaaaatgcaa caagagaaat
    10921 tgcaaaagca gttagaagta tagggcttaa tggttggagt cctgaaaggc ttaaaaagca
    10981 tactttatac tgggataaat ttgatgaggt aactttagaa ggaaaagatg aagttgctgg
    11041 tgagtattac gggcttcctt ggccttgttg gagtgataag cacccaggtt ctcctgtact
    11101 ttataatacc gacattgaag tcgcaaaagg tggtatgggc tttagaaata attttggact
    11161 tgagtatgaa ggagagagtt tacttgctaa aaatgcgcct ttaaattcac ctattgatac
    11221 aggttatcca caaattacta aagataatat agaaaaagtt ttaggtatta ctttaagtgc
    11281 ccaagaaaaa gaaaaaatgg gatcaacttg gtcttatgat gatagcaata tcatagcaac
    11341 taaatgtata gaaaaaggca tagttcctta tggaaatgct aaagctagag ctgtagtttg
    11401 gacttttaaa gataaaattc cactccaccg tgagccttta cattctccaa gaaacgattt
    11461 ggtgcaaaaa tatccaagtt ttgaagatca aaaagcgctt taccgcgtgg atactaaatt
    11521 tgtgtctgtg caacaagcta aggattattc taaagaattc ccgcttaatc ttgttactgc
    11581 aagacttgtg aatttaaatg gtgcaggtat ggaaaataga gcatctatgt atctaacgcg
    11641 tttaacacct gaaatgtttt gtgagatcaa tcctgaatta gcaaaagagc aagacattaa
    11701 agcaggagat atgatttggg tacattctcc agaaggtact aaaattcatg taagagtgaa
    11761 ggttaatcca ggtgtagcaa aagatatgat tttcttgcct ttccatttta caggagttat
    11821 gcaaggcgtg gatttaacgc acaatttccc taaaggaaca aaaccttatg caagtggaga
    11881 aagtgctaat acggtaacaa attatggtta tgatatcatg tgtcagattc cagagactaa
    11941 aggtgggctt tgtagaatca gtaaggatgg aaaatgagta aggtaaattt tgcaaattta
    12001 gaaaaagaac gcttgaaatt cttttgtgat aatgagcgtt gtattgattg taatggttgt
    12061 gcggtagctt gtgatgaagc acatgagctt cctattcata ttcgccgtcg ccgtgtgatt
    12121 actttaaatg aaggaattca aggaaaagaa gtttcaactt ctatttcttg tatgcattgt
    12181 gatgatgctc cttgttctat cgtttgtcct gtggattgtt tttacatccg tgctgatggt
    12241 attgttttgc atgataaaga aatttgcata ggttgtggat attgtcttta tgcttgtcct
    12301 tttggtgcac cacaatttcc aaaagatagt gtttttggaa ataaaggcat tatggataaa
    12361 tgtactatgt gtgcaggtgg ccctgaagca acgaattcag aaaaagaaag agaactttat
    12421 gggcaaaatc gtatcgcaga aggaaaagtt cctgtatgcg ctgcgatgtg ttcgacaaaa
    12481 gcacttttag taggtgaaag ttctaaaata gaagagattt atcataatag acttatgaat
    12541 agaaattatg gcattccaaa tccttcggaa agtttggagt ggaagattgc ttacacagga
    12601 aaggaacgct tatgagaaaa gtatttgtaa cgcttttatt aagcgtagtg agtttatttg
    12661 cttatggtag cgagagaatg ggacaagata ctcaaatttg ggattttcat cgtattacaa
    12721 atatcccaaa ttatgatact tttggcaaac tttggacaac tttacaaggt gaatatatag
    12781 ctactatagc tttaattgct gttattgcgg tattatctgc atttgctttg cattatatgg
    12841 ttataggacc taagcaattt tcacacgatg gaaagaaaat ttatgctttt acattatttg
    12901 aaagactttt tcattttatc gcggcaattt cttgggtgat tttagtgcca actggttttg
    12961 tgatgatgtt tggggcgact tttggaggcg gactttttgt aagggtttgt aaaaatttac
    13021 atgcttttgc aacggtttta tttatcatct ctataatccc tatgttttta tggtggatta
    13081 aaagaatgct tcctgcaagt tatgatatca gatggatgat gatagtaggt ggttatttaa
    13141 gcaaagtaaa acgtcctgta cctgcaggta agtttaattt tggtcaaaaa tcttggtatt
    13201 atatagctgt atttggtgga tttttgatga taattacagg tggatttatg tattttcttg
    13261 attttaattc cacggcaatt caaggtcttt ttggtttaac tcaaattgaa cttttaagaa
    13321 tttcagctat agtgcataat ttcttgggta tagtgtgtgc agtgtttttt ggtgtgcata
    13381 tttatatggc agtatttgca atcaaaggca gtatccattc tatgattagt ggttataaag
    13441 aagaagaaga ggtttatatt ttacattctt attggtataa agaattaagc aataaaaagc
    13501 aaattgaacc tagtttttct tatgatccta atgtaaaaat ttaatcttta accgctatgt
    13561 tattgcatag cggtagtttt aagctttttt gaaataaata gaacgaattt tattttataa
    13621 gttgaatcta aaatctattt ttccatatat aaatttgtta tttatgtttt tttgatataa
    13681 tattatttaa agatatttaa aggataaggt atggatccgt tatttacaac tcaaatttta
    13741 aaatataaag gtgatgattc ttttacatgt gatgatactt tagtgcgtga aattaagctt
    13801 gaaattttta ttaatgatga aagagtaggt gctttaatgg caactcctgt agatgaacag
    13861 gcattagcaa taggatattt aatgagcgaa aatatcattg cgaaagtaag cgatattgag
    13921 agcatagaaa caaaagatga tggtatgagt gtgcatatta aagcaaagat tgataaagaa
    13981 aatttagcaa agcttaatgc tgaaggtgta gttataagtg gttgcggtag agcacatact
    14041 gccaatatcg atccagaagc tattgaagcg agtaaaatta gttctgatgt aaaatttagc
    14101 aaagatgaaa ttttaaaaca aatgagtact ttttatactc aatgcgagct ttatgagaaa
    14161 acaggctgtg tacatacggc taagcttttt gtagatgaga aaactttttt tataggtgaa
    14221 gatatagctc agcataatac catagataaa gctttaggaa aagcacgttt agctggggtt
    14281 gatttaagtc aatgtttttt aatggttagt ggaaggctaa gttctgaaat ggtagctaaa
    14341 gcagttatgc ataaaattcc agtacttgtt tcacgcacgg ctcctacttg tttaggagtt
    14401 atgatagcaa gaaaatttga tttaacgctt tgtggttttg ctagagaaaa taagattaat
    14461 atttatagtg gagaatttag aattcatgga taaaaatcaa gaaaaagaaa tcatctcata
    14521 tatgagagaa ttgttaaata gtaatgaaaa attagattgt ggtacggctt ttaaaattgc
    14581 aaagaaattt aatgtaaata tagaaaaaat cggacaatta gccgatgaaa atcacatgag
    14641 aattgataat tgcgagttgg ggcaatttgg acatttagat tttgaaaaag caaagattga
    14701 agtacttaaa aaaatagaac ctagtttaga tgaaaagcgt agaatttttt gtaaagatgc
    14761 aagagatatt gctaaagaag gttgtgggct taaaagtatg cgttcagctt taaaagctta
    14821 taaggttgat gtaaagtatt gtcaacttgg ttgttttaaa gaaaaaaaag gtaagcaatt
    14881 tatagtaaga acaaaaactt ggattgaaaa tgcggatgga gatttgcttt ttggacgagg
    14941 aaaaacagaa cttttagaac ttatcggaca aacaggtagt ttattgcatg cttctaaact
    15001 tatggggatt aattataaaa aagcttggat gcatttacaa accttacaaa aaaattctca
    15061 agaaatctta gttagcacaa gacaaggacg ctctaaagaa tcaggaacta aacttactcc
    15121 tagagctttg gaattaatgg aaaattactc tattttacaa aaagatatag aagaatacgc
    15181 taataaacgc tttaaagaac tgtttttaaa aggaaaaaaa taaatcttct atcaaaaaat
    15241 act
//
LOCUS       DAPWGO010000034        15095 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.035, whole genome shotgun sequence.
ACCESSION   DAPWGO010000034 DAPWGO010000000
VERSION     DAPWGO010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15095)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15095)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15095
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.035"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(191..1387)
                     /locus_tag="RJ336_000951"
     CDS             complement(191..1387)
                     /locus_tag="RJ336_000951"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDZ5213408.1"
                     /translation="MYLFTSEVVSAGHPDKCADIIADTIVDILLKNDKNSRVASEVFV
                     AGNKVVIGGEVKSNHKLSKADYDNLVKDVLKNIGYDGAGHFSKEQCLHPDEVDVMVFL
                     NEQSPDINQGVDQEDGETGAGDQGIMFGFASCEAEEYMPAAISYARMLCDRVYAYAKA
                     NPHELGVDIKTQVTIDYGTKANFENCEPQSIHTIVVSAPCVESMKIEDLRSLVMKLIL
                     DSNLPKELFDPNKTRILINPTGKYVNHSSLHDSGLTGRKLIVDSFGGYSPIGGGAQSS
                     KDYTKVDRSGLYAGRWLAKNIVAAGLAKKCIVQLSYAIGVAKPTSVSVDCMGTNTSVN
                     DDVLSDFVMQNFSLTPNWIRDKFHLDKPSKETFLYADVAARGQVGQKDYPWEKLDALE
                     QFKKLL"
     gene            1527..2750
                     /gene="sstT"
                     /locus_tag="RJ336_000952"
     CDS             1527..2750
                     /gene="sstT"
                     /locus_tag="RJ336_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HDZ5213409.1"
                     /translation="MFSKIIQSYAKGNLIVQICIGIVLGILIGISSKEISEIANLLGI
                     LFTSALKAIAPMLVFILILTSICTKDFSQSGAKIKNIIILYIVGTFLASACAVLANFF
                     FPVKLVLDGVQTATNSSPTHMSEIFKDLLFKIVDNPINALSSGNYLGILTWAIAGGIA
                     LKHCSNEAKQVFIDINEGVLKIVKFIVKLAPFGIFGLVANSVAQTGAQGLLSYVKLLI
                     LLVTTMLFVTFVINALIVFFYTRKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALC
                     AKLGIDKEFYGISIPLGATINMAGAAVTIAILSLTAANTVGIEISLLQAFLLSIIATF
                     AACGASGVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVIQDSVETALNSSTDVL
                     FTAICSKNELNYNIK"
     gene            2760..3647
                     /locus_tag="RJ336_000953"
     CDS             2760..3647
                     /locus_tag="RJ336_000953"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HDZ5213410.1"
                     /translation="MRHLITTKDFNKVEIMELFKEASDFLDEKPRTFLKGKSITTIFF
                     ENSTRTLSSFESAARRLGARVLRLDVSRSSSSKGETLYDTAANLDAMSPNAIVVRHAN
                     SGVPLILAKHIHCPVVNGGDGKHAHPTQALLDLFTIYNHFQGDVEGKKICIVGDIKNS
                     RVAASNIELLSRFNLDITLVAPPHFMPNTHLKKHYKLDENIIANSDIIMSLRTQTERH
                     NKTVYASLKDYANDFCIQKSLVKDKKLILLHPGPVNRNIDISDEMMSDERTLVLKQVK
                     NGVAIRMAALKKLILENEG"
     gene            3651..5372
                     /locus_tag="RJ336_000954"
     CDS             3651..5372
                     /locus_tag="RJ336_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HDZ5213411.1"
                     /translation="MLEWDLSALFHDKEALQNFTQDQIQQSLNFKKNYENKLYALNAN
                     EFLQALKDYENLNQALGKIMTYAYLLFAKNTQNGSFYAQYEEECKKIEENLLFFELEF
                     CELAPEKSQEFTTFCKDYDFYLSNLLQNKRYNLSKNEERIMLYLSNTGANAFSRLFDE
                     SMSALKIPFEGKKLSEEEILSKMYDEDRKTRKKAAKKFSKVLQKNSRLLSFIINMIKT
                     ERKNISLLRGYENAEISRHISNQISQKSVDSLIASAQKHFNLVSQFYKRKKQILGYDE
                     LKDYDRYAPIGKEASFDFKTSKNIVLEAFQAFSPQFYDIAKNAFNQGWIDVYPQENKQ
                     GGAFSHSATSDAHPFVLLNYTDKRRDLFTLAHELGHTIHQKLSYNVSYLNQNTPLTTA
                     ETASVFAEMLVFDFIKDKLKKEELLSLYANKIEDIFATFYRQINFTCFERRLHAQENE
                     LSTEEINKIWMEESQKMFQDSVKLTKNYASWWSYIPHFIHSPFYCYAYAYAQLLVLAL
                     YGLYKSKKCENFKELYIKMLSLGGSVSPKELVGMFGFDIEDENFWEIGIKEIQKLINE
                     FMELQSC"
     gene            5366..5803
                     /locus_tag="RJ336_000955"
     CDS             5366..5803
                     /locus_tag="RJ336_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213412.1"
                     /translation="MLETILKNENFIHTMQKHCYEVISHLIEENIEFSIVANTNFIDF
                     NPELPKELDVKQNPYALFALGGYTFESIQLNKDFIQFHAGFGNDDFDSFVKVDLGAIT
                     QIQIENNILFVNFSLYKREDSKNLQKSKNIFLNNPKNKDIFKK"
     gene            5800..7875
                     /locus_tag="RJ336_000956"
     CDS             5800..7875
                     /locus_tag="RJ336_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDZ5213413.1"
                     /translation="MNLFEDLNDSQKQAVSHIDGAMLILAGAGSGKTKTITTRLAYLI
                     GEVGIPSHNTLTLTFTNKAASVMRHRALNFLQGNHNPLLCTFHKFGLLFLKLHFERLE
                     RKNSFIVIDTDDTKKIIKDLIHDKNKDNVYDIIKYISYCKNEGKRVSNVFEDLNLLKE
                     HNFEKYQNEYKFANYYRAYEEYLLKQNFVDFDDLLLLSNLILENDINFAKEQSLLYNY
                     ITVDEYQDTNTLQYKILKNLCCMHENITVVGDDDQSIYSWRGAKIENILNFQNDFKNV
                     KLVKLEQNYRSVGTILQAANNLISHNEQRLGKTLICTKDTGENIKILKNENEKDEGLY
                     IAQEVKKLLNSGVEAKEIAVLFRVNALSRAIEEAFMKEKISYKLLSGMRFYERLEIKD
                     LISYLRLILNPNDDLSFRRIINRPKRSIGEKALKNLEEYAKKRQISLFDALCESDGGV
                     GILTTKKAQNEANIFIQNIHTLKSYDNAKKVFDNIEELFKIKDYFSEQDDGDERIRNL
                     DEFYANLREKLKEDPEASLEDLLSEISLLSDQDNLDEECVCLMSIHASKGLEFDYVFI
                     IGFDEGFFPLNSEENLEEERRLAYVAITRAKKFLTISVANSRFYHGSRANINPSRFLE
                     ESKLINEKSKNQNIQKTSFCKGDLVKHKIFGIGRVVEVNKSGKEEKLNINFGGIMRVI
                     MASFVEKAV"
     gene            7872..8690
                     /gene="truB"
                     /locus_tag="RJ336_000957"
     CDS             7872..8690
                     /gene="truB"
                     /locus_tag="RJ336_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDZ5213414.1"
                     /translation="MNKIFAAFKPRGLSSNAFLSTLKKKYKNKKAGYSGTLDPFAKGV
                     LIVAFGQYTKLFRFLKKTPKTYKATLWLGVYSLSLDDQNIKEIKNIKEFDLANLQQII
                     DQMQGIISYTPPQFSAKRINGTRAYELAKKGIEANLKPCQMEVFDCKILSYNHPFLNI
                     EITVSEGAYIRSYCELFARKLGINATLSSLERIKEGKFVYNNEKSLNVLKYINLKPNF
                     IKDLNKLENGAKIFVEELKFHDEGDYYIETEKYFSIINIKENTVKYLLNKVEKC"
     gene            8684..8911
                     /gene="csrA"
                     /locus_tag="RJ336_000958"
     CDS             8684..8911
                     /gene="csrA"
                     /locus_tag="RJ336_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDZ5213415.1"
                     /translation="MLILSRKENESIIIGEGIEIKVVQTGKGYAKIGIEAPKSLMILR
                     KELVQQVKDENLHSVVQNDIKLDDLSKKLIK"
     gene            8908..9675
                     /locus_tag="RJ336_000959"
     CDS             8908..9675
                     /locus_tag="RJ336_000959"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDZ5213416.1"
                     /translation="MKAYAKANIFLKLTGFDSRKYHLLESRFILLKDLFDELELVDKE
                     SDSKKEFEIISNFKCENNIIQKAYLLLSKRYNNELKELFSKKSLKLTKNIPVCAGLGG
                     GSSDCASFLLLMNETLNLKLNLQELINLSIQLGSDIAFFLSGFHSANVSGCGEIIEEF
                     EDDIPNLKWTFPQISCQTKAVYDEFDRGIFDFQKNNNQAQIYKKLSTKELLQNFKNKE
                     LNDLFTPCATLYPKMKSYLQEDFFLSGSGSSVFKVDR"
     gene            9672..10124
                     /gene="smpB"
                     /locus_tag="RJ336_000960"
     CDS             9672..10124
                     /gene="smpB"
                     /locus_tag="RJ336_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDZ5213417.1"
                     /translation="MKIIARNKKALFDYSIIERFEAGIVLKGSEVVALRAGRANLKDS
                     FVRIIKNEIFLLNSHISLLHTTHSFYKHEERGARKLLMHRKQIDKLLGKVSIEGYTIV
                     ALDLYFNTKNKVKATLALAKGKNLHDKRETLKKKQADLEARAAMKNYK"
     gene            10135..10737
                     /locus_tag="RJ336_000961"
     CDS             10135..10737
                     /locus_tag="RJ336_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDZ5213418.1"
                     /translation="MKKILTLFLISLAFFLNACSKEEEIQNDFMFEEYHKGDKIVLNS
                     VNGGSKTLIRTDKGFVVEGEEGKVLMFDFFGTFCTPCKEEALDLSKLWKNNSSKFIII
                     GLTHFEDVSDETVKKFADDYGAYYFLSNGGSNDRIIAQILKDIDYQNMEQLPFKVVLK
                     NGIYQKISDYWNNNAPTNFYLGKIPTELMQEDLNKIYKGK"
     gene            10737..11027
                     /locus_tag="RJ336_000962"
     CDS             10737..11027
                     /locus_tag="RJ336_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HDZ5213419.1"
                     /translation="MPKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQN
                     LEKASQTMLEIHHNGSGICGIYTQEIALSKQKKVIDAAKLANFPLQAKVEEE"
     gene            11024..13153
                     /locus_tag="RJ336_000963"
     CDS             11024..13153
                     /locus_tag="RJ336_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDZ5213420.1"
                     /translation="MKYQENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLSIDFKD
                     IFEEFSDGDLELLETELKNYISQNNQVIKQEIEPTISVVLDEILLSSKNKNNEIKIID
                     FLEKLIQDSRSYSSYLLKKHNINLTKIQELQNHENIQNLSNHTSNLTLLAQNGKIDPL
                     IGRKFELERMMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIAEKKVPKNLQNAKIF
                     SLDMASILAGTKYRGDFEKRIKEILNELEKIPNAILFIDEIHTIVGAGSTGESHTDFS
                     NLLKPALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGLK
                     NKYEEFHHIKLNDEILQYAVIWGKKFFNDKFLPDCAIDLIDELGASFALNPKAKKNAN
                     LKDLENVLAKMTHHHKMFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGF
                     KNSNTPRGVFLFTGSSGVGKTEFCKALAEFLGLNLERFDMSEYAEKHAISKLIGSPAG
                     YIGFEEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFK
                     NTIIIMTSNLGLKESNELGFLSKNEEKSNRAIKDFFAPEFINRIDKILHFNDLNDAIL
                     VKIIEKELDEISKNLNNIKLSVDDKVKIYLAKKAYNKEFGVRLLKRIISEEIGEKISD
                     EILFGKLKKGGIAKIKLGKNGKLEFIF"
     gene            13128..13775
                     /locus_tag="RJ336_000964"
     CDS             13128..13775
                     /locus_tag="RJ336_000964"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HDZ5213421.1"
                     /translation="MESSNLYSKLLNAPKNAPVFLSQNLEADFIVKAYTFGLFPWTSK
                     PVTWWCPDPRCILIPNQIHIQKNMKKFINLYQIKLDYDFLKLITLCRDTRSQSWIDDE
                     FITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKL
                     CDLLKPYDFIIDCQVYNQHLEFMGAHNISRKEFLNILKEKCNQESGFKNFKDLIT"
     gene            complement(13798..15087)
                     /gene="cetZ"
                     /locus_tag="RJ336_000965"
     CDS             complement(13798..15087)
                     /gene="cetZ"
                     /locus_tag="RJ336_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetZ"
                     /protein_id="HDZ5213422.1"
                     /translation="MFGAKKNNTEIIEQLEKKCNGLGDILRSIGNTMAVIEFTTDGVI
                     LEANQNFLTTMKYSLSEIKGKHHSMFCLPEVVNSSAYSDFWKDLRDGKARSGLFRRIA
                     KGGIDVYLEANYLPISDNNGHVYKIIKFANDITQRHYEMLDLRNTIAAANRSMAIIEF
                     KPDGTIITANENFLRTMDFNIDEIKGKHHSMFCDSNYRHSKDYVQFWEDLREGKFQSG
                     KYIRYGRNNKKVYLEASYNPVKNDDGKIYKVIKFATDISEQVKKDQEKLRLISELAEK
                     NDNLTQDGDRVIENTVSNVQNIADMMSQSSNLVSSLNQQSDEIKSIIQTISDIADQTN
                     LLALNAAIEAARAGEHGRGFAVVADEVRNLAERTGHSVNEITTTINSIRNVTSQVVES
                     IKSGLEDVNQSVELAKEARECMEKIRESSAEVAKAMS"
BASE COUNT         5631 a         2264 c         2268 g         4932 t
ORIGIN      
        1 ttctgtcaaa caatattttg acttagaggg gtttttaccc caaaagctaa attaatttag
       61 cttccttcct aacttttata tttatgaggg atattgaaaa atatccctct aagtcaaaaa
      121 ttaatataac ctcattaatt ctttataatt atacaagcct tatttaagct tgtataatat
      181 tgttaatttt ttaaagtagc tttttaaact gttctagagc atcaagtttt tcccaaggat
      241 agtccttttg tcctacttgc ccacgagctg ctacatccgc ataaagaaaa gtttctttac
      301 ttggtttatc cagatgaaat ttatcacgaa tccaatttgg tgttaaagag aaattttgca
      361 taacaaaatc acttaaaaca tcgtcattta cactagtatt tgtgcccata caatccacgc
      421 ttaccgaagt aggttttgca acacctatag catagctaag ttgaacaata cattttttag
      481 caagccctgc tgcaactatg tttttagcta gccatctacc tgcataaagt ccacttctat
      541 caaccttagt ataatctttg ctcgattgtg cgccaccacc tattggagaa taacctccaa
      601 aactatctac tataagcttt cttcctgtta aaccactatc atgcaaagaa gaatgattaa
      661 catatttacc ggttggatta attaaaattc tagttttatt aggatcaaaa agttcttttg
      721 gtaaattact atctaagata agtttcatca ccaaagatct taaatcttct attttcatac
      781 tttcaacaca aggtgcagaa actactatag tatggatact ttgcggttcg caattttcaa
      841 aattcgcctt agtaccataa tcaatagtta cttgagtttt aatatctact ccaagttcat
      901 gtggatttgc ttttgcataa gcataaactc tatcgcatag cattcttgca taactaatag
      961 ctgctggcat gtattcttca gcttcgcaac ttgcaaaacc aaacataata ccttgatcac
     1021 ctgctcctgt ttcgccatct tcttgatcga caccttgatt gatatcaggg ctttgttcat
     1081 ttaaaaacac cataacatca acttcatcag gatgcaaaca ctgctcttta ctaaaatgcc
     1141 ctgctccgtc ataaccaatg ttttttaaaa catctttaac taaattatcg taatcagctt
     1201 tactaagctt gtgatttgac ttaacttcgc ctcctatcac aaccttattt cctgcgacaa
     1261 aaacctcact cgccaccctt gaatttttgt catttttcaa gagtatatcc actatcgtat
     1321 cagcgattat atcagcgcac ttgtctggat gacctgcact tacgacttct gaagtgaata
     1381 gatacataaa aagtcctttc atttaaaatg aaccacaatt gtatccaaat aaacttatca
     1441 aagcttgata aattaaaaat ttactaaaat taagcaaaag ttagttaaaa tcaacttctg
     1501 atataaaaaa tatttaaaag gtttttatgt tttctaaaat cattcaaagc tacgctaaag
     1561 gcaacctcat agttcaaatt tgtataggta tagtactagg aatactcata ggcattagct
     1621 ctaaagaaat atctgaaatt gcaaatttac tcggaatact ttttacaagt gccttaaaag
     1681 ctatcgctcc tatgcttgtt tttattttaa ttttaacctc aatttgcact aaagattttt
     1741 ctcaaagtgg tgctaagatc aaaaatatta ttattttgta tatagtaggc acctttcttg
     1801 cttcagcttg tgcggttctt gctaattttt tcttccctgt aaagcttgtt ttagatggag
     1861 ttcaaaccgc tacaaactca tctccaaccc acatgagtga gattttcaaa gatcttttat
     1921 ttaaaattgt cgataatcct ataaatgctc tatcaagtgg aaattattta ggaattttaa
     1981 cttgggcaat agccggaggt atagcattaa aacactgttc taacgaagca aaacaagttt
     2041 ttatagatat caatgaaggg gttttaaaaa ttgttaaatt tatagtaaaa cttgctcctt
     2101 ttggaatttt tggacttgtg gctaattctg tagcacaaac aggagcgcaa ggtttactaa
     2161 gttatgtaaa acttttaatt ttacttgtaa ctactatgct ttttgttact tttgttatta
     2221 atgccttaat agtctttttt tatacaagaa aaaatccttt tcctttgatt tttatctgct
     2281 taaggcacag tgcatttttt gcttttttta caagaagttc ggcagcaaat attcctgtaa
     2341 atatggcact ttgtgccaaa cttggcatag ataaagaatt ttatggcatt tctatacctt
     2401 taggagctac tatcaacatg gcaggagcgg cagttactat agctatttta agccttactg
     2461 cagccaatac cgttggtata gaaatcagtc ttttacaagc ctttttatta agcattattg
     2521 ctacctttgc agcttgtggg gctagcggag ttgcgggcgg atctttactg cttatacctt
     2581 tggcttgttc tttatttaat atagactatg atattgctat gaaggtagtt gccataggtt
     2641 ttattatagg ggttattcaa gatagtgttg aaactgcttt aaatagttct acagatgttc
     2701 tttttacagc aatttgttct aaaaatgaat taaattacaa tatcaaataa ggtaaaaaca
     2761 tgcgtcatct catcactaca aaagatttta ataaagtcga aattatggag ctttttaaag
     2821 aagcaagtga tttcttagat gaaaaaccta gaacttttct taaaggaaaa agtatcacga
     2881 caattttttt tgaaaactct acacgcaccc tttcatcttt tgaaagcgct gcaagaagat
     2941 taggcgctag ggttttacgc cttgatgttt caagatcaag ctctagcaaa ggagaaactc
     3001 tttatgatac tgctgctaat ttagatgcca tgagtcctaa tgctattgtt gtaagacacg
     3061 caaactcagg agttcccttg atattagcaa agcatataca ttgtccagtt gttaatggag
     3121 gagatggaaa acacgcccat cctactcaag ctttgctaga tttatttact atttataatc
     3181 attttcaagg tgatgtcgaa ggtaagaaaa tttgcatcgt aggtgatatt aaaaattccc
     3241 gcgttgcagc gtctaatata gaacttttaa gcagatttaa tcttgatatt accctagtag
     3301 ctccaccgca ttttatgcct aatacccatc ttaaaaaaca ttataagctt gatgagaata
     3361 tcatagcaaa ttcagatatt atcatgagtc ttagaacaca aacagaaaga cataataaaa
     3421 ccgtttacgc ttcacttaaa gactatgcaa atgatttttg tattcaaaaa agcttagtaa
     3481 aagataaaaa gcttatttta ctacatccag gccctgtaaa tcgcaatatt gacataagcg
     3541 atgaaatgat gagcgatgaa agaactttag ttttaaaaca agttaaaaat ggagtggcca
     3601 ttagaatggc tgctcttaaa aaactcatat tagaaaatga aggataaaaa atgttagaat
     3661 gggatttaag tgctttattc cacgataaag aagcattaca aaattttaca caagatcaaa
     3721 tccaacaaag tttaaatttc aaaaaaaact atgaaaataa actttatgca ttaaatgcta
     3781 atgagttttt acaagcttta aaagattatg aaaatttaaa tcaagccctt ggcaaaatca
     3841 tgacttatgc ttatttactt tttgctaaaa acactcaaaa tggttctttt tatgcacaat
     3901 acgaagaaga atgcaaaaaa atagaagaaa atttactctt tttcgagctt gaattttgcg
     3961 agttagctcc tgagaaaagt caagaattta caactttttg caaagattat gatttttatc
     4021 tttctaattt attgcaaaac aaacgctata atcttagcaa aaacgaagaa cgcattatgc
     4081 tctatctttc aaatacaggt gcaaatgctt ttagtagact ttttgatgaa agtatgagtg
     4141 ctttaaagat cccttttgaa ggtaaaaaac ttagcgaaga agaaattcta agcaaaatgt
     4201 atgatgaaga tagaaaaaca cgcaaaaaag ctgctaaaaa attcagtaaa gttttgcaaa
     4261 aaaatagcag acttttaagt tttattatca atatgataaa aacagaaaga aaaaatataa
     4321 gcttattaag aggttatgaa aatgctgaaa tttcaagaca tatcagtaat caaatttcac
     4381 aaaaaagcgt tgattctttg atagcaagcg cacaaaaaca ttttaactta gtatcgcaat
     4441 tttacaaaag aaaaaaacaa attttaggct atgatgagct taaagactac gacagatatg
     4501 cacccatagg aaaagaagca agttttgatt ttaaaacaag taaaaatatt gttttagagg
     4561 catttcaagc tttttctccg caattttatg atatagcaaa aaatgctttt aatcaaggct
     4621 ggattgatgt ttatccacaa gaaaataaac aagggggtgc tttttcacat tctgcaactt
     4681 ctgatgcgca tccttttgtt ttattaaact acaccgataa aaggcgtgat ctttttacac
     4741 ttgcacatga attaggacat actatccatc aaaaactttc ttacaatgta agctacttaa
     4801 atcaaaacac acctttaacc accgcagaaa cagcttcagt ttttgctgaa atgctggtat
     4861 ttgattttat taaagataag ttaaaaaaag aagaactcct atctttatat gcaaataaaa
     4921 tcgaagatat ttttgcaact ttttatagac aaattaattt tacttgtttt gaaagacgct
     4981 tacatgctca agaaaatgaa cttagcaccg aagaaatcaa taaaatttgg atggaagaat
     5041 ctcaaaagat gtttcaagac agcgtaaaac ttacaaaaaa ttatgcttct tggtggagtt
     5101 atattcctca ttttatccat tctccttttt actgctatgc ttatgcttat gcacaacttt
     5161 tagttttagc tctttatgga ctttacaaaa gtaaaaaatg tgaaaatttt aaagaacttt
     5221 atatcaaaat gctttcttta ggtggaagcg tgagtccaaa agaactagta ggaatgtttg
     5281 gctttgatat agaagatgaa aatttttggg aaataggcat aaaagaaatt caaaaactca
     5341 tcaatgaatt tatggagtta caatcatgct agaaacaatc ttaaaaaatg aaaattttat
     5401 ccataccatg caaaagcatt gttatgaagt tatttcacac cttatagaag aaaatataga
     5461 attttccata gttgcaaata caaatttcat agattttaac cctgaacttc ccaaagagct
     5521 tgatgttaaa caaaatcctt atgctctttt tgctcttgga ggatacacct ttgaatccat
     5581 acaactaaat aaagatttca ttcaatttca cgcaggtttt ggaaatgatg attttgatag
     5641 ttttgtaaag gttgatttag gagctatcac gcaaattcaa atagaaaata acattttatt
     5701 tgttaatttt agcctttata aacgcgaaga tagtaaaaat ttacaaaaat ctaaaaatat
     5761 atttttaaat aatccaaaaa ataaagatat tttcaaaaaa tgaatctatt tgaagattta
     5821 aatgatagtc aaaaacaggc agtaagccac attgatggag ctatgcttat cctagcgggt
     5881 gcaggtagtg gaaaaaccaa aactattacc actcgtcttg cttatcttat cggtgaagta
     5941 ggcatcccct cgcataacac tcttactctt acttttacaa ataaagcagc tagtgttatg
     6001 cgtcatagag cattaaattt tctacaaggc aatcacaatc ccttgctttg cacctttcat
     6061 aaatttggac ttttattttt aaaactccat tttgaaagat tggagcgtaa aaatagtttt
     6121 attgttatcg atacagatga tacaaaaaaa ataattaaag acttaatcca tgataaaaac
     6181 aaagataatg tctatgatat tatcaaatac atatcttatt gcaaaaatga aggcaaaaga
     6241 gtaagcaatg tctttgaaga tttaaattta ctaaaagaac ataattttga aaaatatcaa
     6301 aatgaataca aatttgccaa ctattaccgt gcttatgaag aatacttatt aaagcaaaat
     6361 tttgtagatt ttgatgatct tttattgcta agcaatctca ttttagaaaa tgatataaat
     6421 tttgccaaag aacaaagctt actttataat tacattacag ttgatgagta tcaagatact
     6481 aataccttgc aatataaaat tctaaaaaat ctatgttgta tgcatgaaaa tatcacagtt
     6541 gttggtgatg atgatcaaag tatttatagt tggcgtggag caaaaattga aaatatttta
     6601 aattttcaaa acgattttaa aaatgttaaa cttgtaaaac ttgaacaaaa ctatcgttca
     6661 gtagggacta ttttacaagc agcaaataat ctcatatctc acaatgagca acgacttgga
     6721 aaaactttaa tctgcactaa agatactggg gaaaatatta aaatattaaa aaacgaaaac
     6781 gaaaaagatg aaggtttata tatcgctcaa gaagtgaaaa aattgctaaa ttctggagta
     6841 gaagctaaag agatcgccgt tttatttcga gttaatgcac tatcaagagc aatagaagaa
     6901 gcatttatga aggaaaaaat ttcttataaa ctgcttagcg gtatgcgttt ttatgagaga
     6961 ttagaaataa aagatttaat ctcgtatctt agacttatct taaatccaaa tgatgatttg
     7021 tcgtttaggc gtattattaa tcgccctaaa agatccatag gagaaaaagc cctaaaaaat
     7081 ttagaagaat atgcaaaaaa acgtcaaatt tcactttttg atgccttatg tgaaagcgat
     7141 ggcggtgtag gaattttaac aacaaaaaaa gcacaaaatg aagcaaatat ttttatacaa
     7201 aatattcaca ctctaaaaag ctacgataat gcaaaaaaag tttttgacaa tatagaagaa
     7261 ttatttaaaa tcaaagatta tttttcagag caagatgatg gagatgaaag aatcagaaat
     7321 cttgatgagt tttatgctaa tctaagagaa aaactcaaag aagatcccga agcttcttta
     7381 gaagatctac ttagtgaaat ttctttatta agtgatcaag ataatttaga tgaagaatgt
     7441 gtttgcttga tgagtattca tgctagcaaa ggtttggaat ttgattatgt ttttataata
     7501 ggctttgatg aaggattttt tcctttaaat agcgaagaaa atctcgaaga agaacgccgt
     7561 cttgcttatg ttgccatcac tcgcgccaag aaatttctca caataagtgt tgcaaattct
     7621 cgtttttatc atggttcaag agcaaatatc aatcctagtc gcttcttaga agaaagtaaa
     7681 ttaatcaatg aaaaatcaaa aaatcaaaat atacaaaaaa ctagtttttg caaaggagat
     7741 ctagttaaac ataaaatttt tggcattggc agggttgttg aagttaataa aagcggaaaa
     7801 gaggaaaagc ttaatattaa ttttggtggt ataatgcgtg taatcatggc aagctttgtg
     7861 gaaaaagcag tatgaataag atctttgcag cctttaaacc aagaggtttg agttctaatg
     7921 cctttttaag tactttaaag aaaaaatata aaaataaaaa agcaggatat tctggcactc
     7981 ttgatccttt cgccaaaggg gttttaatcg ttgcgtttgg acaatacaca aaacttttcc
     8041 gatttttaaa aaaaactcca aaaacctata aagctacttt atggcttgga gtttactcct
     8101 taagtcttga tgatcaaaat ataaaagaaa ttaaaaatat aaaagaattt gatcttgcaa
     8161 atttacaaca aatcattgat caaatgcaag gaattatctc ctatacaccg ccgcaattta
     8221 gcgccaaaag aatcaatgga actcgcgcct atgaacttgc aaaaaaaggt atagaagcaa
     8281 atttaaaacc ttgccaaatg gaagtatttg attgcaagat tttaagctat aatcatcctt
     8341 ttttaaatat cgaaatcaca gtcagtgaag gtgcttatat aagatcttat tgcgaacttt
     8401 ttgctagaaa actaggtatt aatgcgactt taagctcttt agagcgcatt aaagaaggca
     8461 aatttgttta taataatgag aaaagcttaa atgtgttaaa atacattaac ctaaagccaa
     8521 attttatcaa ggatttaaat aaactcgaaa atggtgctaa aatttttgtc gaagaattaa
     8581 aatttcatga tgaaggagat tattatattg aaacagaaaa atattttagc ataattaata
     8641 ttaaagaaaa tacagtaaaa tatcttctaa ataaggttga aaaatgttaa tattatcaag
     8701 aaaagaaaat gaaagtataa ttatcggaga aggtatagaa atcaaagtcg ttcaaacagg
     8761 gaaaggatat gccaaaatag gcatagaagc tccaaaatcc cttatgatac ttagaaaaga
     8821 acttgttcaa caagtaaagg atgaaaattt gcattctgtt gttcagaatg atattaaact
     8881 tgatgactta agcaaaaaac taatcaaatg aaagcttacg ctaaagcaaa tattttttta
     8941 aaacttaccg gttttgactc aagaaaatat catcttttag aatcacgatt tatactttta
     9001 aaagatcttt ttgatgagct tgagcttgtt gataaagaat cagactctaa aaaagaattt
     9061 gaaatcatta gtaattttaa atgcgaaaat aatattattc aaaaggctta cttactactt
     9121 tctaaaagat ataacaacga attaaaagaa ttatttagca aaaaaagcct aaaactcaca
     9181 aaaaatatcc cagtatgtgc tggacttggc ggtggaagta gcgattgtgc gagtttttta
     9241 ctactaatga atgaaaccct aaatttaaaa ttaaacctac aagaacttat aaatttaagc
     9301 atacaactag gaagcgatat tgcctttttt ttaagtggct ttcactctgc taatgtaagt
     9361 ggctgtggcg aaattataga agaatttgaa gatgacatac ctaatttaaa atggactttt
     9421 ccacaaatat cttgccaaac taaagctgtt tatgatgaat ttgatagagg aatatttgac
     9481 tttcaaaaaa acaataatca agcgcaaatc tacaaaaaac tcagcacaaa agagttgtta
     9541 caaaatttta aaaacaaaga attaaatgat ttatttactc cttgtgcaac tttatatcct
     9601 aaaatgaagt cttacttaca agaagatttt tttctaagcg gtagcggtag tagtgttttt
     9661 aaggttgatc gatgaaaatt attgcgagaa ataaaaaagc tttatttgat tatagcatca
     9721 tagaacgctt tgaagccgga attgtcctta aaggaagtga agttgtagcc ttaagagcag
     9781 gaagagcaaa tcttaaagac tcttttgttc gcattataaa aaatgagatt tttttactta
     9841 attctcatat ttcattgctt catactacac attctttcta taaacacgaa gaaagaggtg
     9901 ctagaaagct tttaatgcat agaaagcaaa ttgataaatt attaggtaaa gtaagtatag
     9961 aaggatatac tattgttgca ttagatcttt attttaacac aaaaaataaa gtaaaagcca
    10021 ctcttgcttt agctaaaggg aaaaatttgc acgacaagcg tgaaacttta aagaaaaagc
    10081 aagccgattt agaagctaga gctgctatga aaaattataa ataaaggaaa ttaaatgaaa
    10141 aaaattttaa ccctattttt aataagttta gcattttttc ttaatgcttg ctccaaagaa
    10201 gaagaaattc aaaatgattt tatgtttgaa gagtatcaca aaggagataa aatagtatta
    10261 aatagtgtaa atggtggaag caaaacttta ataagaacag ataaaggttt tgtggtagaa
    10321 ggagaggaag gaaaagttct aatgtttgat ttttttggca ctttttgcac cccatgcaaa
    10381 gaagaagctt tagatcttag caaactttgg aaaaataatt ctagcaaatt tatcattata
    10441 ggacttacac attttgaaga tgttagcgat gaaacagtta aaaaattcgc ggatgattat
    10501 ggtgcttact attttctaag caatggcggt tctaatgatc gtattattgc tcaaatttta
    10561 aaagatatag actatcaaaa tatggagcaa cttcctttta aagttgtttt aaaaaatgga
    10621 atttatcaaa aaataagcga ttactggaat aataatgctc caacaaattt ttatcttggc
    10681 aaaattccaa cagaactcat gcaagaagat ttaaataaaa tctacaaagg aaaataatgc
    10741 caaaaaccca aactctagag cagacaaaac ttagtgaacc aaaaatgtat aaagttatac
    10801 tcttaaatga tgatgtaaca accatggatt ttgttataga aattttgatg aatatttttc
    10861 atcaaaacct tgaaaaagca agtcaaacaa tgttagaaat tcatcacaac ggttctggaa
    10921 tttgtggcat ttacactcaa gaaatagctc tttcaaaaca aaaaaaagtt atagatgcgg
    10981 ctaaacttgc taattttcca ctacaagcaa aggtagaaga agaatgaaat accaagaaaa
    11041 tttacaaaaa tatcttgata atgccaaaaa tctaagctta ataaaccacc atgaatttgt
    11101 tacctgtgag catgtactgt ttgcattact aaaactaagc attgatttta aggatatatt
    11161 tgaagaattt tcagatggag atcttgaact tctagaaact gaattaaaaa attacatttc
    11221 tcaaaacaat caagttatta aacaagaaat agaacctaca atatctgttg ttttagatga
    11281 aatcttactt tcatctaaaa ataaaaataa tgaaattaaa attatagatt ttttagaaaa
    11341 gctcatacag gattcaagaa gttattctag ctatctctta aaaaaacaca acataaatct
    11401 taccaaaatt caagaacttc aaaatcatga aaatatacaa aatttaagca accacacaag
    11461 taatttaaca cttttggctc aaaatggcaa gattgatcct ttaataggaa gaaaatttga
    11521 acttgaaaga atgatgcaaa ttctttcacg tcgcaagaaa aataatccta ttttagtagg
    11581 agaagcagga gttggcaaaa cggccattgt agaaggatta gcattggcta ttgcggaaaa
    11641 aaaggtgcct aaaaacttac aaaatgcaaa aatttttagt cttgatatgg ctagtatact
    11701 tgcgggaaca aaataccgtg gagattttga gaaaagaatt aaagaaattt taaatgaact
    11761 tgagaaaata cccaatgcta ttttatttat tgatgaaatt cacactatag taggagctgg
    11821 aagcacagga gaatctcata ctgatttttc caatctttta aaaccagctc taagtaatgg
    11881 aactttaaaa tgcataggtg caacaacttt tatggaatat aaaaatactt ttgataaaaa
    11941 taaacctcta agtcgccgtt ttgctaaaat aaatgtagat gaaccaagcc aagaagaaag
    12001 tttgcaaatt cttaaaggat taaaaaacaa atatgaagaa tttcatcata taaaattaaa
    12061 cgatgaaatt cttcaatatg ctgtaatttg gggtaaaaaa ttttttaatg ataaattttt
    12121 acctgattgc gctatagatc tgatcgatga acttggcgct tcttttgctt taaatccaaa
    12181 agctaaaaaa aatgcaaatt taaaagattt agaaaatgtt ttagcaaaaa tgacccacca
    12241 tcacaaaatg tttgaattcg atcaaaataa agctttaatg aatttaaaaa caaatttaaa
    12301 agcaaaaatt tttggccaag atgaagttat agatagcctt gtttcatcac ttaagcaaag
    12361 tttcgcagga tttaaaaatt ccaatacacc acgcggagtg tttttgttta ctggatcaag
    12421 tggagttgga aaaacagaat tttgcaaagc tttagctgaa tttttaggtt taaatttaga
    12481 gcgctttgat atgagcgaat atgcagaaaa acatgctata agtaaactaa taggatctcc
    12541 agctggatat ataggttttg aagagggtgg acttttaagc aatgctattc gcaaaaatcc
    12601 tttcagtctt gttctttttg atgaaataga aaaggctcat cctgatttaa gcaatacctt
    12661 tttacagatt tttgacaatg ctgaactcac cgacaatagc ggtcttaaag tagattttaa
    12721 aaatacaatc attattatga catctaatct aggacttaaa gaaagcaatg agcttggttt
    12781 tttaagtaaa aatgaagaaa aaagtaatcg tgctatcaaa gatttttttg ctccagaatt
    12841 tattaatcgc attgataaaa ttttacattt taatgattta aacgatgcta tacttgttaa
    12901 aattatcgaa aaagaacttg atgaaatttc taaaaattta aataatataa aattatcagt
    12961 ggatgataaa gtcaaaattt atttagctaa aaaagcctat aataaagaat ttggagtaag
    13021 gcttttaaaa cgcataattt ctgaggaaat aggagaaaaa atcagtgatg aaattttatt
    13081 cgggaagctt aaaaaaggcg gtatagctaa aatcaaactt ggtaaaaatg gaaagctcga
    13141 atttatattc taaattactc aatgcaccta aaaatgctcc tgtattttta agtcaaaatt
    13201 tagaagctga ttttattgta aaagcttata cttttggtct attcccatgg acaagtaaac
    13261 ctgtaacttg gtggtgtcca gatcctagat gcattttaat tccaaatcaa attcacatcc
    13321 aaaaaaatat gaaaaaattt attaatctct atcaaattaa acttgattat gattttttaa
    13381 aattaattac attatgtcgc gatacacgct ctcaaagctg gatagatgat gaatttatta
    13441 ccacttatta taagttattt acccaaggct atgcgcatag ccttgaactt tatgaaaata
    13501 atgaacttat aggtggaatt tatggtttaa ttttaggcaa ggttttcttt ggtgaaagca
    13561 tggtaagcat taaaaaaaat gcatctaaag ttgccatgat taaactttgt gatttattaa
    13621 aaccttatga ttttatcata gattgtcaag tttataacca acatttagaa tttatgggtg
    13681 ctcataatat ttctaggaaa gaatttttaa atattttaaa agaaaaatgc aatcaagaaa
    13741 gtggttttaa aaattttaaa gatttaatta cttaaaaaat aagcgtgaaa atcacgctta
    13801 tgacattgct ttagcaactt cagcagagct ttcacgaatt ttctccatac attctcttgc
    13861 ttcttttgca agttcaacac tctgattaac atcctctaaa ccgcttttaa tactctcaac
    13921 cacttgtgat gtaacattac gaatagaatt aatcgtagtg gtaatttcat taactgaatg
    13981 ccctgttctt tcagctaaat ttcttacttc atcagcaaca acagcaaaac ctctaccatg
    14041 ttcaccagca cgtgctgcct caatagcagc atttaaagca agcagattag tctgatcagc
    14101 aatatcacta atagtctgaa taatagattt aatttcatct gattgttgat ttaatgagga
    14161 aacaagattt gaactttgag acatcatatc agcaatattc tgaacatttg aaacagtgtt
    14221 ttcaattaca cgatctccat cttgagtaag attatcattt ttttctgcaa gttcgcttat
    14281 gaggcgaagt ttttcttgat cttttttaac ttgttcgctt atatctgtag caaatttaat
    14341 aaccttgtaa atttttccat catcattttt aaccggatta taacttgctt caaggtatac
    14401 ttttttatta tttcttccgt atcttatata tttacctgat tgaaatttgc cctctcttaa
    14461 atcttcccaa aattgaacat agtccttaga gtgtctataa ttagaatcac agaacatact
    14521 atgatgcttt cctttaatct catcaatatt aaaatccata gttcttaaaa aattttcatt
    14581 agccgtaata atagtcccat caggtttaaa ttcaataata gccatagaac gattagcagc
    14641 agcaatagta tttctaagat caagcatttc ataatgtctt tgagttatat cattggcaaa
    14701 tttaataatt ttataaacat gaccattatt atcactaatt ggaagataat ttgcttctaa
    14761 ataaacatct atccctccct tagctatacg tctaaaaaga ccacttctgg cttttccatc
    14821 tcttaaatct ttccaaaaat cactatatgc cgaagaatta acaacttcag gcaaacaaaa
    14881 catactatga tgcttgccct tgatctctga aagggagtat ttcatagttg ttaaaaaatt
    14941 ttgatttgcc tctaaaataa cgccatcggt ggtaaattca attaccgcca tggtattccc
    15001 aatagatctt aaaatatctc ctaaaccatt acactttttt tcaagttgtt caattatttc
    15061 agtattattt ttcttagcac caaacataaa actca
//
LOCUS       DAPWGO010000035        14358 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.036, whole genome shotgun sequence.
ACCESSION   DAPWGO010000035 DAPWGO010000000
VERSION     DAPWGO010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14358
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.036"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            75..1094
                     /locus_tag="RJ336_000966"
     CDS             75..1094
                     /locus_tag="RJ336_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213423.1"
                     /translation="MNLKIFSIIVSILIAVIVILGGTYYYLFEYSKPKNYTLNTNTYT
                     EQKSYTNNYDNSYSPSIQTNNSSSDININNNTIQKQETNLLDENQSLNNDTFNTSISE
                     NNQSLNNDTNTSNNINTNENKQILDTDKEKLKQENKQAKIEALKKEISKQQKILERER
                     AVKKELQSNKSNKNKYLNTAREYLSIGKNSRLEPELSTENMKVYILDGKFLSQYRINL
                     LKDMLSVIQDNAKDYYLSIFVKMLPKGEMKLTIYNKEIIFSDMKKAYKYISLDRLSPY
                     LNNPKELNEHVAREEILERLKLQIKKDGKGSDFSKHIKSLKTGLNTAQYFFPFCEIIE
                     ISSIK"
     gene            1117..3729
                     /locus_tag="RJ336_000967"
     CDS             1117..3729
                     /locus_tag="RJ336_000967"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDZ5213424.1"
                     /translation="MYDKNLEKEYYQICEERGYFEIDGNKTIQEKDKNFCIMMPPPNV
                     TGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNVVEKQLLAQGIKKE
                     ELGREKFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLVNAVKKAFVELY
                     DKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKYFLKDSDEFLVVATTRPET
                     FFGDTAVMVHPDDERYTKFVGKEVILPISKKAIKIIADEHVEKEFGTGVVKVTPAHDM
                     NDYEVGLRHNLDFISVFNEKGILNEHCLEFQGLERLEAREKIVAKLESLGFIEKIEEH
                     NNQIGYCYRCNNIVEPYISKQWFVKKEIAQESIEKVALGESKFYPNHWINSFNAWMKD
                     LRDWCISRQLWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVLDTWFSSG
                     LWAMSTLGWGNENWGKDKIWSENDLEDFYPNSLLITGFDILFFWVARMMFQSTNALHQ
                     LPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRDIKL
                     SNDKLLQVRNFTNKIYNATNYLLLNESKFEDLENITLHSELAKYIYAKFQTCVKDVRE
                     NLDNYRFNDAANTLYKFFWDDFCDWGIELSKAEKSSVKELGSIFKEALKLLNPFMPFI
                     SEYLYHKLSDTELKTSPSIMISKYPKFKEQDKNIEKIFSLLIESIVGIRRAKSLIDLG
                     NSKIEKAYIKFNDKKIKDEIKAYMNFIMMLAKCEQIEFSEEKLPKAICDVSENLEIFI
                     TLENVDLSGILTRLENQKNKLEKESFKLNSMLSNEKFIANAPKEVVEQNKEALENLKI
                     QLEKISVELQNLRG"
     gene            3734..4744
                     /locus_tag="RJ336_000968"
     CDS             3734..4744
                     /locus_tag="RJ336_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213425.1"
                     /translation="MIKIKNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLL
                     RCINGLENYQEGSLKVFDQEIKDLSQKKSKELRVLRKDIGMIFQNFALMERKNVFENV
                     AMPLRTHYTQCKFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQ
                     RVAIARALALNPKILLSDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVK
                     DIAQKALLLEHGQIIGSGAIDELFLRPNAKMKEFLGESDFLPEHGLNIKLYFPKEVAQ
                     NSVITHMARTLNIDFNIVWGKIEKLNGKALGNLVININEKDKDKVLDYIEKSGVLWEV
                     AS"
     gene            4741..5652
                     /locus_tag="RJ336_000969"
     CDS             4741..5652
                     /locus_tag="RJ336_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ5213426.1"
                     /translation="MNEENISIISAFFSRISQFFNEFSWQDIKEVSLSSITSFSENYE
                     NILKPALNETIYMSLMAVLFGFLLAIIPGILLAIWDKNGIKENKIAYSILDFITNILR
                     AFPFLILIVVLLPLSKIIVGTSIGTNAAIVPLAIGIAPYLAKMLESAFKEIDKGIIEA
                     AKSYGASNIQIIFKVIFSEALPAIISGITLTLIFTIGFSALAGTVGGGGLGDVAIRYG
                     YERFNKEVMIQTVVILLILVQLVQILGNLFYTWAKNSKTTYIIATLLILLGISIVINI
                     NNDENFFWQVIVFILFLGSLLYKGFEK"
     gene            5844..6617
                     /locus_tag="RJ336_000970"
     CDS             5844..6617
                     /locus_tag="RJ336_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDZ5213427.1"
                     /translation="MKIKSLFIVSILTLSLNANALETITVAATPVPHAEILEQVKPDL
                     EKQGYKLEIKEFTDYVLPNLAVDNGEADANFFQHTPYLEEFNKNKGTKLIKVAAIHIE
                     PMAVYSKKYKSLDDIKEGVKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDIID
                     NPKKIKFVELKPAQLPRALDDVDFAVINSNYALSANLNPAKDSVFIEDKESPYVNILV
                     VRVGHENDPKIKALTQALQSDKIKQFIIEKYNGSVLPAF"
     gene            6666..7436
                     /locus_tag="RJ336_000971"
     CDS             6666..7436
                     /locus_tag="RJ336_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDZ5213428.1"
                     /translation="MNLFKIIILACILNLSSLFAQNITIGATPNPFGSLLELMKDDFK
                     NKGYELKIVEFSDYILPNRALEEKELDANLYQHKPFLEEYNLKKGSNLIATTPVLIAP
                     VGVYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKN
                     PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVV
                     RSEDKNSEKTKVIDEILRSDKFKAIINEHYKDILIPAF"
     gene            7446..8222
                     /locus_tag="RJ336_000972"
     CDS             7446..8222
                     /locus_tag="RJ336_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDZ5213429.1"
                     /translation="MNIKKIFLSVLFTISLSFGADKTIIIGATPTPYAEILNFSKPLF
                     QEKGWKLIVKEFNDYNIPNIALNEKDLDANLYQHKPFLDDFNTHKGTNLSSLGAIVLV
                     PMAIYSNSIKDIKDIPNGAKIAIPNDATNESRALDLLAKANLIEFKSQSTLKTPIDIS
                     KNPKKLKFIELKAAQLPRALNDTDLAVITTNYALGAGLNPLKDGIFMEDKDSLYAIVL
                     ATIKGEETSQKSLVIKEILTSDKIKNFIIEKYKGSVIPTF"
     gene            8306..8968
                     /gene="flgA"
                     /locus_tag="RJ336_000973"
     CDS             8306..8968
                     /gene="flgA"
                     /locus_tag="RJ336_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HDZ5213430.1"
                     /translation="MKIIFLTFFIVINYIQAASLEEIKTALAKEFRNNFPKIIISQID
                     LKITSLPKDFDQYEFLRIANGRFNQAQGFLRAEFKTPQNIQKNVFFRYFIQANLEVLK
                     SERTIKRGDKLGAFDYKSVLIDFDKVPLNALTLDDVDNLVAKSNINKNAILRANMFKT
                     TALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKEGKVMQGIVVGKNRMI
                     IQ"
     gene            8965..9528
                     /locus_tag="RJ336_000974"
     CDS             8965..9528
                     /locus_tag="RJ336_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HDZ5213431.1"
                     /translation="MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLSFKAE
                     NEVNLEEICQENFKYTHFLDDKNLSLSVASGSFGIEKTIIAPCSISSLAKIHAGFADT
                     LLMRAAAVALKERKKLILGVREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLE
                     QMENFIVGKWLDLLEIKHNLYEKWQNF"
     gene            9568..10044
                     /gene="coaD"
                     /locus_tag="RJ336_000975"
     CDS             9568..10044
                     /gene="coaD"
                     /locus_tag="RJ336_000975"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDZ5213432.1"
                     /translation="MTCLYPGTFDPITNGHLDVIKRALKIFDEVIVAIAKSEHKKPCY
                     DLEKRKELALLATQNLKNVKIIAFDNLLVDLAKELKVNTIIRGLRAVSDFEYELQIGY
                     ANHALWEDMETIYLMPSLKHAFISSSIVRSIVAHGGDVSSLVPKEILPFLKDQSCM"
     gene            10035..10613
                     /locus_tag="RJ336_000976"
     CDS             10035..10613
                     /locus_tag="RJ336_000976"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDZ5213433.1"
                     /translation="MYVVFEGIDCVGKSTQISLLKEIYKDAIFTLEPGGTELGKHLRE
                     ILLNKTHPISKRAELLLFLADRAQHFEEILKTNQNKLIISDRSFISGMAYAKDFENDL
                     LFALNSFALENFFPQKIIFLKGDANLIQERLSQKELDSIEKRGIEYFLSVQDKLEKVL
                     HFLKEKISIEILTLDAKESKEKLHQQIKEFLQ"
     gene            10610..11836
                     /locus_tag="RJ336_000977"
     CDS             10610..11836
                     /locus_tag="RJ336_000977"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDZ5213434.1"
                     /translation="MINALKGMKDLLDKDAYYYEKVIKTCEEVAKNYGFTFINTPHLE
                     LCTLFKRSVGESSDIVGKEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKR
                     WFYHGSMFRYERPQKGRLREFHQFGVESFGNASVYEDASIILMLVEIFSRLDIKFKLL
                     INSLGCLKCMPKYRENLIHFLDSKEGFCEDCLRRKNLNPIRVLDCKNEHCQSLLNDAP
                     LLNQNLCSSCQKDFEILQSVLKENGVDFEVDSKLVRGLDYYSKTAFEFISDEIGAKAA
                     IAGGGRYDRLIEYLDGKSGFGVGFAMGIERIIAILEQKEEKVQREGIYLCAMDEIYIQ
                     KLLHIATNLRKEHKVLLSYEARKLAKHLENADKNNAEIFLCMGENEAQNESLFYKNLV
                     KKEEKMIKISDLKKVL"
     gene            11833..13668
                     /gene="speA"
                     /locus_tag="RJ336_000978"
     CDS             11833..13668
                     /gene="speA"
                     /locus_tag="RJ336_000978"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HDZ5213435.1"
                     /translation="MMDYGIDIWGNENFIIKNGKVCINHEKKPAIIDIVKELRDDGYK
                     GPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGK
                     DYNYGLEAGSKAELLLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGL
                     NELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLL
                     KENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLA
                     VEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIA
                     PVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLF
                     DLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSI
                     PDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKEN
                     YFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDALEDLDYD
                     IHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV"
     gene            13669..14307
                     /gene="cysE"
                     /locus_tag="RJ336_000979"
     CDS             13669..14307
                     /gene="cysE"
                     /locus_tag="RJ336_000979"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDZ5213436.1"
                     /translation="MNFWGIIKEDFSQPKAQDPAFNSCIELFFNYPGVWAVVNYRFAH
                     FFYIRNFKRIARMISGISQFLTGVDLHPGAELGRRVFIDHANGVVIGQTAIIEDDVLI
                     YQGVTLGGTSLEKGAKRHPTIKKGVIIGSGAKVLGNITIGENAKIGSNAVVVKDVGAN
                     LTAVGIPAYIIEERKNKNIRAIDANCDDKLEKLEKKILELENLILKQPESQK"
BASE COUNT         5519 a         1997 c         2383 g         4459 t
ORIGIN      
        1 atttaaaatt actttatatt agattatagt acaatgctaa aattatttaa ctttctgttt
       61 ttaagggata gcaaatgaat ttgaaaattt tttctattat tgttagcata ttaattgctg
      121 ttattgtgat attaggtgga acatattatt atctttttga atattcaaaa ccaaagaatt
      181 acaccttaaa taccaacact tacaccgaac aaaaatcgta taccaataac tacgataatt
      241 cctattcacc ttcgatccaa accaacaata gttcatcaga tataaatatt aataacaata
      301 ccatccaaaa gcaagaaaca aacctattag atgaaaatca aagcttaaat aacgatacat
      361 ttaatacatc aataagcgaa aacaatcaaa gcttaaataa tgacaccaat acaagtaata
      421 atattaatac aaatgaaaat aagcaaattt tagatacgga taaagaaaaa ttaaaacaag
      481 aaaataaaca agccaaaata gaagctctta aaaaagaaat cagcaaacaa caaaagatct
      541 tagaaagaga aagagctgta aaaaaagaac ttcaatcaaa caaatcaaac aaaaataaat
      601 atctaaatac cgctagagaa tatctaagca taggaaaaaa cagtcgttta gaacctgagc
      661 ttagcacaga aaatatgaaa gtttacattt tagatggaaa atttttaagc caatacagaa
      721 tcaatctgtt aaaagatatg ctaagcgtta tacaagataa tgcaaaagat tattatctaa
      781 gtatttttgt taaaatgcta ccaaaagggg aaatgaaatt aactatctat aacaaagaaa
      841 ttatcttttc agatatgaaa aaagcttata aatatattag tttagataga ttaagcccat
      901 atttaaacaa tccaaaagaa ttaaatgaac atgtagcacg tgaagaaatt ttagaaagac
      961 ttaaacttca aattaaaaaa gacggcaaag gaagtgattt ttctaaacat atcaaaagtt
     1021 tgaaaactgg acttaataca gcacaatatt tcttcccgtt ttgtgaaatt atagaaatta
     1081 gctctattaa ataagctaaa acaataaagg caaataatgt atgataaaaa tttagaaaaa
     1141 gagtattatc aaatttgcga agaacgcgga tattttgaaa tcgatggcaa taaaaccata
     1201 caagaaaaag ataaaaattt ctgcattatg atgcctcctc ctaatgtcac tggagtttta
     1261 cacataggac atgctttaac cttcactcta caagacatta tgacgcgtta taaaagaatg
     1321 gacggttata aggttcttta tcaaccagga cttgatcacg caggtattgc cactcaaaat
     1381 gttgtagaaa aacaactcct tgctcaaggc attaaaaaag aagaactagg tagagaaaaa
     1441 tttatagaaa aagtatggga gtggaaagag caaagcggtg gaaaaatttt agaccaaatg
     1501 agaacactag gcatcactcc tgcatggagt cgcttgcgtt ttactatgga tgaaggtttg
     1561 gttaatgccg taaaaaaagc ctttgtagaa ctttatgata aaagacttat tgtacgcgga
     1621 aactatatga tcaattggtg tactcacgat ggcgctttaa gtgatataga agttgaatac
     1681 aaagaaaaca aaggaaaact ttatcatatt aaatactttt taaaagatag cgatgaattt
     1741 ttagtagtag ccacaacgcg tcctgaaact ttttttggcg atactgcagt tatggtacat
     1801 cctgatgatg aacgctatac taaatttgtg ggtaaagaag tgattttgcc tataagcaaa
     1861 aaagccatta aaatcatagc cgatgaacat gtagaaaaag aatttggaac aggagttgta
     1921 aaagttactc ccgctcatga catgaacgat tatgaagtag gacttagaca taatttagat
     1981 tttataagtg tttttaatga aaaaggaatt ttaaacgagc attgtttaga gtttcaaggt
     2041 ttagaacgct tagaagcaag agaaaaaatc gtagccaaac ttgaaagtct tggctttata
     2101 gaaaaaatag aagagcataa caatcaaata ggatattgtt atcgttgcaa caatatagtt
     2161 gaaccttata tctccaagca atggtttgta aaaaaagaaa tcgcccaaga aagtatagaa
     2221 aaagttgcac ttggcgaaag taaattttac ccaaatcact ggataaatag ctttaatgct
     2281 tggatgaaag atttaagaga ttggtgtatt tcaagacaac tttggtgggg gcatcaaatt
     2341 cctgtgtatt attgcgaatg ctctcatgaa tgggcaagcc aacatacgcc taaaacttgt
     2401 ccaaaatgtc aaagtcaaaa tttcaaacaa gatgaagatg tacttgatac ttggttttct
     2461 tcaggacttt gggctatgag tactctaggc tggggaaatg aaaattgggg caaagataaa
     2521 atttggtctg aaaatgattt agaagatttt tatcccaatt ctttactcat tacaggtttt
     2581 gatattttat ttttctgggt ggctagaatg atgtttcaaa gcactaatgc tttacatcaa
     2641 ctgcctttta aagatattta tttacatgct cttgtgaaag atgagcaagg tagaaaaatg
     2701 agtaaaagtc ttggaaatgt catcgatcca aatgaaagta ttaaagaata tagtgctgat
     2761 attttacgct ttactttagc acttcttgct atacaaggac gagatattaa acttagcaat
     2821 gataaacttt tacaagttag aaattttaca aataaaattt ataatgctac aaattatctg
     2881 cttttaaatg aaagtaaatt tgaagatttg gaaaatatca cacttcattc agaattagca
     2941 aaatatatct atgccaaatt tcaaacttgt gttaaggatg taagagaaaa tttagacaat
     3001 tatcgcttta atgatgcagc taatactcta tataaattct tttgggatga tttttgcgat
     3061 tggggtatag agcttagcaa agccgaaaaa tcaagcgtta aagaacttgg tagtattttc
     3121 aaagaagctt taaaactttt aaatcctttc atgcctttta tcagcgagta tttataccac
     3181 aaactaagcg atacagaact taaaacaagc ccttctatta tgataagcaa atatccaaaa
     3241 tttaaagaac aagataaaaa tatagaaaaa atcttttctt tgctcataga aagcatagtt
     3301 ggtatccgcc gtgctaaaag tttaatcgat cttggaaatt ctaaaataga aaaagcttat
     3361 atcaaattta acgataaaaa aatcaaagat gaaatcaaag cttatatgaa ttttatcatg
     3421 atgctcgcaa agtgcgagca aatagaattt agtgaagaaa aattaccaaa ggcaatatgt
     3481 gatgttagcg agaatttaga aatttttatt acgcttgaaa atgttgattt aagtggtatt
     3541 ttaacaagac ttgaaaatca aaaaaataag cttgaaaaag aaagtttcaa gcttaactcc
     3601 atgctttcaa atgaaaaatt catcgctaac gcacctaaag aggtggttga gcaaaataaa
     3661 gaagctctag aaaatttaaa aattcaactt gaaaaaatat cagttgaact tcaaaatcta
     3721 agaggttaaa aatttgataa aaataaaaaa tttaaaaaaa tattatggca aggaactcgt
     3781 gataaacgat gtttctttgg agattaaaaa gggtgaaatt tacgccatag taggtcatag
     3841 tggagctgga aaatccactc ttttaagatg tattaatgga cttgagaatt atcaagaagg
     3901 aagtttaaaa gtctttgatc aagaaattaa agatttaagt caaaaaaaat caaaagagct
     3961 aagagtgctt agaaaagata tagggatgat ctttcaaaat tttgccctaa tggaacgcaa
     4021 aaatgtattt gaaaatgttg ctatgccttt aagaacacac tatactcagt gtaaatttca
     4081 tgccaagctt tttaataaag aatacatgag cgaaaaagaa attgcccaaa aagtcaattc
     4141 cttacttgaa atcgtagggc ttgatcataa aaataaatcc tatccaagag aactgagcgg
     4201 ggggcaaaaa caacgcgttg ctattgctag agccttagct ttaaacccaa aaattttact
     4261 tagtgatgaa gctacttcgg ctcttgatcc aaacactaca aaaaatattt tagagcttat
     4321 atctaaaatc aatgctgaat ttgggattac tgttgtttta gtaactcacg aaatggatgt
     4381 agtaaaagac atagctcaaa aagctttatt acttgaacat ggacaaatca taggaagtgg
     4441 agcaattgat gagctttttt taaggcctaa tgccaaaatg aaagaatttt taggagaaag
     4501 cgacttcttg cctgagcacg gacttaatat caaactttac tttccaaaag aagttgccca
     4561 aaatagtgtc atcactcata tggcaagaac tctaaatata gactttaaca tagtttgggg
     4621 taaaatagaa aaacttaatg gaaaagcctt gggaaattta gttataaata taaatgaaaa
     4681 ggataaagac aaggttcttg attacataga aaaaagtgga gtattatggg aggtggcatc
     4741 atgaatgaag aaaacatctc tatcatcagt gcttttttta gtagaatttc tcaatttttt
     4801 aatgaatttt cttggcagga tattaaagaa gtgagtttaa gttctattac aagtttcagt
     4861 gaaaattatg aaaacatttt aaaacctgcg cttaatgaaa caatttatat gagtttaatg
     4921 gctgtactat ttggattttt attggctatc attcctggaa ttttacttgc tatttgggat
     4981 aaaaacggaa ttaaagaaaa taaaatcgct tatagcattt tagattttat tacaaatata
     5041 ctgcgtgcct ttccattttt aattcttata gttgttcttt taccactttc taaaatcata
     5101 gtaggcacaa gcataggtac aaatgctgcc atagttcctt tagctatcgg aatagctcct
     5161 tatttggcaa agatgcttga aagcgctttt aaagaaatag acaaaggaat catagaagca
     5221 gcaaaaagtt atggtgctag caatattcaa attatcttca aggttatctt tagtgaggcc
     5281 cttcctgcta taattagcgg aattactcta actttgatct ttaccattgg tttttctgct
     5341 cttgctggaa ctgtcggtgg tggaggtttg ggagatgtcg ctattcgcta tggttatgaa
     5401 agatttaaca aagaagttat gattcaaact gtagttattt tacttatatt agttcagtta
     5461 gttcaaattc taggtaattt attttatact tgggctaaaa atagtaaaac tacatatatt
     5521 attgccactc tattgatttt acttggaatt agcatagtta tcaatataaa caatgatgaa
     5581 aatttctttt ggcaagtaat tgtttttatc ttatttttgg gaagtttgct ttataaaggt
     5641 ttcgaaaaat aaggagatta tatctccttt taagataaat ataagttttt ttaagtaaaa
     5701 tttaaacaaa aaattaaagg aattaaaatg atgtatcaga tgcgttaatc tgactatcaa
     5761 caagttttta tatgcttctt cctgatagtc agagtgaatt tattaagatt aaagcaagca
     5821 caaaatgact aaaaaggaaa aaaatgaaaa tcaaatcttt atttatagta agtattttaa
     5881 cattaagtct taatgcaaat gcattagaaa ccatcacagt tgcagcaact cccgtccctc
     5941 atgctgaaat cctagagcaa gtaaaacctg atttagaaaa acaaggctat aaacttgaaa
     6001 tcaaagaatt tacagattat gttttaccta atctagctgt tgataacgga gaagccgatg
     6061 caaatttttt ccaacatact ccttatttgg aagaatttaa taaaaacaaa ggcaccaaac
     6121 ttatcaaagt agccgccata cacatagaac ctatggctgt ttactccaag aaatataaaa
     6181 gtctagatga tattaaagaa ggggttaaaa tcgccattcc aaatgatcca accaatgaaa
     6241 gtagagcttt agatattatt gcaaaaaaag gtttggtaaa atttaaagat aaggctttaa
     6301 aaacacctct tgatattata gacaatccta aaaaaattaa atttgtagaa ttaaagcccg
     6361 cacaacttcc aagagcttta gatgatgttg attttgctgt aattaattcc aactacgctc
     6421 tctctgcaaa tctaaatcct gcaaaagata gcgtatttat cgaagataaa gaaagcccgt
     6481 atgtaaacat tcttgttgta agagtgggac atgaaaacga tccaaaaatc aaagccttaa
     6541 cccaagctct acaaagtgat aaaatcaaac aatttatcat agaaaaatac aacggatctg
     6601 ttttacctgc tttttaattt tgtcccttac ctggggactt ttttcttaaa tacaaaggag
     6661 tttttatgaa tttatttaaa attattatac tcgcttgcat tctaaattta tctagtctat
     6721 ttgcacaaaa cattactata ggagccactc caaatccttt tggtagctta ctagaactaa
     6781 tgaaagatga ttttaaaaac aaagggtatg agcttaaaat agtagaattt tcagactata
     6841 ttttgcccaa tcgtgcatta gaggaaaaag aacttgatgc aaatttatat caacacaaac
     6901 cttttttaga agaatacaac ctaaagaaag gttcaaattt aattgcaaca acgcctgtac
     6961 ttatagctcc agtaggagtt tatagtaaaa aaatcaaaaa tttagaaaat cttaaagaag
     7021 gtgctagagt tgctatacct aatgatgcca ccaatgaaag tagagcttta gagcttttag
     7081 agaaagcaaa attaatagag cttaacaaaa atactctaaa aaccccattg gacataaaca
     7141 aaaatccaaa aaaacttaaa tttatagagc ttaaagctgc acaacttcca agagctttag
     7201 atgatgttga tattgctata attaattcta atttcgcact tggagccggt ctgaatccaa
     7261 gtaaagatac tatttttagg gaagataaaa atagccctta tgtaaattat gttgtggtac
     7321 gctcagaaga taaaaatagc gaaaagacca aagtaattga tgaaatttta agaagcgata
     7381 aatttaaagc catcattaat gaacattata aagatatatt aatcccagct ttttaggagt
     7441 ataacatgaa tattaaaaaa atatttttaa gtgttttatt tacaattagc cttagttttg
     7501 gagcagataa aaccataatc ataggtgcaa caccaacgcc ttatgctgaa attttaaatt
     7561 tctccaaacc cttatttcaa gaaaaaggtt ggaagttaat agttaaggaa tttaatgact
     7621 ataatatacc taatatcgct ttaaatgaaa aagatttaga tgcaaattta tatcagcata
     7681 aacctttttt agatgatttt aatacccaca aaggaacaaa tttaagttct ttaggtgcta
     7741 ttgttttagt tcctatggct atatattcta actccataaa agatataaaa gatattccta
     7801 atggtgctaa aatcgctata cctaatgatg ctaccaatga aagcagagct cttgatttac
     7861 tagctaaagc aaatttaata gagtttaaaa gtcaaagcac ccttaaaacc cctattgaca
     7921 taagtaaaaa tccaaaaaaa cttaaattta tagagcttaa agccgcacaa cttccaagag
     7981 ccctaaatga tactgatttg gctgttatta ccacaaacta tgctcttgga gcaggtttaa
     8041 accctttaaa agatggtatt tttatggaag ataaagatag tttatatgct attgttttag
     8101 ctacaataaa aggtgaagaa acaagtcaaa aaagtcttgt tattaaagaa attttaacaa
     8161 gcgataaaat taaaaatttt atcatagaaa aatataaagg ctctgttatc cctacttttt
     8221 aactctatac aaagccttct aaaggctttg ttaaacttat aaaagctaaa atactattta
     8281 ttgcattata attcttagga taaaaatgaa aattattttt ttaacttttt ttattgtgat
     8341 aaattatatc caagcagcta gtttagaaga aatcaaaaca gcactagcta aagaatttag
     8401 aaataatttt cctaaaatta taatttctca aattgattta aaaataacat cattgcctaa
     8461 agattttgat caatatgaat ttctaagaat cgctaatgga cgttttaatc aagcacaagg
     8521 ctttttaagg gctgaattta aaactccgca aaatatacaa aaaaatgtat tttttagata
     8581 tttcattcaa gcaaatttag aagttttaaa aagcgaacgc actataaaaa gaggagataa
     8641 acttggagct tttgactata aaagcgtatt gattgatttt gataaagttc ctttaaatgc
     8701 cttaacctta gatgatgtag ataatcttgt agctaaaagc aatattaaca aaaacgctat
     8761 tttaagagca aatatgttta aaaccacagc tttaatacgc cgaaatgatc ctataatcgg
     8821 ggttttaagc gaagcaaatg ttgatgtttt aatcgaactt gtggctttgc aaagtgcaaa
     8881 tatgggcgaa aggattcgtg caaaaaacaa agaaggtaaa gttatgcaag gcatcgtagt
     8941 gggtaaaaat aggatgatta tacaatgaag gttttattag gaatttctgg ttcaagcagt
     9001 gtcaatttag gcttaaaatt attaaaaaat ttagaaaatc aatgcgaact ttattgtatt
     9061 ttaactcaag gtgcaaaact tagtttcaaa gctgaaaatg aagtaaattt agaagaaatt
     9121 tgtcaagaaa attttaaata cactcatttt ttagatgata aaaatttaag tctaagtgta
     9181 gcaagtggat cttttggaat agaaaaaact atcattgctc cttgttcgat ttcaagttta
     9241 gcaaaaattc acgctggttt tgcagacact cttttaatgc gtgctgcagc agtagcccta
     9301 aaagaaagaa aaaaactcat cttaggcgta cgtgaaatgc ctttttctac tttaaattta
     9361 gaacatatgt taaaacttag ccaaatggga gttatcatcg cacctcctat tatcgcaagt
     9421 tattctaaag caaacaatct agagcaaatg gaaaatttta tcgtaggtaa atggttagat
     9481 cttttagaaa taaaacacaa tttatatgaa aaatggcaaa atttttagtt taaatttgtt
     9541 atatttttaa aaaaaattgg agcaaaaatg acttgtttat atcctgggac ttttgatcct
     9601 attaccaacg ggcatttaga tgttataaaa cgggctttaa aaatttttga tgaagtcatc
     9661 gttgccatag caaaaagtga acataaaaaa ccttgctatg atttagaaaa acgcaaagaa
     9721 ctagccctgc ttgcaacaca aaatttaaaa aatgttaaaa tcattgcttt tgataattta
     9781 cttgtagatt tagccaaaga attaaaagtt aatactataa tccgtggact tagagcagtg
     9841 agtgattttg aatacgaatt gcaaattggc tatgcaaatc acgcactttg ggaagatatg
     9901 gaaaccattt atcttatgcc aagtctaaaa catgctttta tttcaagttc tattgttcgc
     9961 tctatagtag cacatggggg cgatgtaagt tctcttgttc caaaagaaat tctacctttt
    10021 ttaaaggatc aatcttgtat gtagtttttg aaggtattga ctgcgtagga aaaagtacgc
    10081 aaatttcact tttaaaagaa atttacaaag acgccatttt tacactcgaa cctggcggaa
    10141 cagaacttgg aaaacattta agagaaattt tacttaataa aactcatcct attagcaaaa
    10201 gagctgaact cttgcttttt ttagctgatc gtgctcaaca ttttgaagaa atcttaaaaa
    10261 ccaatcaaaa caaactcatt attagcgata gaagttttat ttcaggcatg gcttatgcca
    10321 aagattttga aaacgatttg ctttttgctt taaatagttt tgctttagaa aatttttttc
    10381 cacaaaaaat tatcttttta aaaggagatg caaaccttat ccaagaacgc ctcagtcaaa
    10441 aagaactaga tagcatagaa aaacgtggca ttgagtattt tttaagtgtg caagataaac
    10501 tcgaaaaagt gcttcatttt ttaaaagaaa aaatttctat agaaatttta acacttgacg
    10561 caaaagaaag taaagaaaaa ttacaccaac aaataaagga atttttacaa tgattaacgc
    10621 tttaaaagga atgaaagatt tattagataa agatgcatat tattatgaaa aagtgattaa
    10681 aacctgcgaa gaagtagcta aaaactatgg ctttactttt atcaatacac cgcatttaga
    10741 actttgcacc ctttttaaaa gaagcgtagg agaaagttct gatatagtag gtaaagaaat
    10801 gtatgaattt atcgataaag gcgaaaatca tgtttgcatg cgtcctgaag gaactgctgg
    10861 ggtggtgcgt gcctatatag aaaaaaaact cgataaaaac actagtgtga aaagatggtt
    10921 ttatcatggc tctatgttcc gctatgaaag accccaaaag ggacgcttaa gagaatttca
    10981 tcaatttggc gttgaaagtt ttggaaatgc aagcgtttat gaagatgcaa gtattatttt
    11041 aatgttagta gaaatttttt cacgcttgga tattaaattt aaattactga ttaactcttt
    11101 aggctgttta aaatgtatgc caaaatatcg tgaaaattta atacattttt tagatagcaa
    11161 agaaggtttt tgcgaggatt gtttgcgtag aaaaaactta aatcctattc gtgttttaga
    11221 ctgcaaaaat gagcattgcc aaagcttact taacgatgct ccgcttttaa atcaaaattt
    11281 atgctcatct tgtcaaaaag actttgaaat tttacaaagc gttttaaaag aaaatggagt
    11341 ggattttgaa gtggattcta agcttgttag agggcttgat tactactcta aaacggcttt
    11401 tgaattcatt agtgatgaaa ttggtgcaaa agctgctatt gctgggggcg gaagatatga
    11461 tagacttatt gaatatcttg atggaaaaag tggttttggt gtaggttttg ccatgggcat
    11521 agaaagaatt atagccattt tagaacaaaa agaagaaaag gttcaaagag aaggaattta
    11581 tctttgtgct atggatgaaa tttatatcca aaaacttttg catatcgcta caaatttaag
    11641 aaaagaacat aaagtgcttt taagctatga agcaagaaaa ctagctaaac atctcgaaaa
    11701 cgcggataaa aataatgctg aaatttttct ttgcatggga gaaaatgaag cacaaaatga
    11761 aagtttgttt tataaaaatt tagtaaaaaa agaagaaaaa atgattaaaa tttcagactt
    11821 aaagaaggtt ttatgatgga ttatggtatt gatatttggg gaaatgaaaa tttcattatc
    11881 aaaaatggta aagtttgtat caatcacgag aaaaaacctg ctattattga tatagttaaa
    11941 gaattaagag atgatggata taagggacct ttacttttaa gatttcctca tctcatccaa
    12001 aaacaaattg aaaatattta cggaaatttc aataaagcaa gaaaggaatt tggctataaa
    12061 ggaggattta acgctgttta tcctttaaag gtaaatcaat accctggttt tgtaaaaaat
    12121 cttgtaaagc ttggaaaaga ctataactac ggacttgaag caggttctaa agcagagctt
    12181 ttactcgcta tggcttataa taacgaaggt gcacctatta ccgtaaatgg ctttaaagat
    12241 agagaactta tcaacatagg ctttatcgca gctgaaatgg gacataatat cactttaact
    12301 atagaaggac ttaatgagct tgaagctatc atagacatag ctaaagaacg ctttaaacct
    12361 aaaccaaata taggcttacg tgtgcgttta cattctgctg gagttggaat ttgggcaaaa
    12421 agcggtggga ttaattctaa atttggactt acatccactg aacttataga agcggtaaat
    12481 ttactcaaag aaaacaaact tttagaacaa tttaccatga ttcactttca tctaggctca
    12541 caaattaccg aaattcatcc cttgaaaaaa gccttaaatg aagcaggaaa tatttacaca
    12601 gaacttagaa aaatgggagc taaaaatcta aaagctatca atcttggtgg cggtttagct
    12661 gtagaatact cacaatttaa aaatgaaaaa agtagaaatt ataccttaag ggaatacgct
    12721 aacgatgtag tttttatcct aaaaaatata gctgaacaaa aaaaagattt agagcctgat
    12781 attttcatag aaagtggacg ttttgtagca gctaatcacg ctgttttaat tgctcctgta
    12841 ttagaacttt tttctcaaga atacgcagaa aacaaactca tacttaaaaa acaaaatcca
    12901 aaacttatcg atgagcttta tgatctttat aaaagcataa aaccttccaa tgcattagaa
    12961 tacttgcacg atagcataga tcatttagag agtattttaa ctctttttga tttgggctat
    13021 gtggatttac aagatcgttc caatgctgaa attttaactc atttgattac aaaaaaagcc
    13081 atcttgcttt taggtgataa gcaaaatcct gcggatttac ttgctataca agatgaagta
    13141 caagaaaggt atttggtaaa tttttcactc tttcaaagca tacccgattt ttggggctta
    13201 gaacaaaatt tccctatcat gccacttgat cgcttagatg aagaaccgac tcgaagtgca
    13261 agtatttggg atataacctg cgatagtgat ggagaaattt catactctaa agataaacct
    13321 ttatttttac acgatgtaga tgtagaaaaa gaaaattatt ttctagggtt ttttcttgta
    13381 ggtgcctatc aagaagtact tggaatgaaa cacaatcttt ttactcatcc tactgaagct
    13441 attataagta tcaatgaaaa aggctatgaa gttgagggga ttatagaagc acaatccata
    13501 cttgatgcct tagaagattt agactatgat atacacgcta tcatggatat acttaatgaa
    13561 cgcataagta attctaagct tgtaaatgac aagcaaaaaa agcatatttt aggggagctt
    13621 tatcttttct taaatgataa tggttattta aaaagcatag gagtttagat gaatttttgg
    13681 ggtattataa aagaagattt ttctcagcca aaggcacaag atccagcttt taattcttgt
    13741 atagaacttt tttttaatta ccctggagtg tgggctgtag taaattaccg ctttgcacat
    13801 tttttttata taagaaattt taaacgcatt gctagaatga ttagtggaat ttcacaattc
    13861 ttaactgggg tagatttaca ccctggcgca gaacttggaa ggcgtgtttt tatagatcac
    13921 gccaatggag tggttatagg tcaaacagca attatagaag atgatgtttt aatttatcaa
    13981 ggcgttactt taggtggaac aagcctagaa aaaggtgcta aacgccatcc aaccataaaa
    14041 aaaggagtga tcataggctc aggcgcaaaa gtacttggca atatcaccat aggagaaaat
    14101 gccaaaatag gctcaaatgc tgtagtagtt aaagatgtag gtgcaaattt aactgccgtt
    14161 ggcattcctg cttatattat cgaagagcgt aaaaataaaa acattagagc catagatgca
    14221 aattgcgatg acaaactaga aaagttagaa aagaaaattt tagaacttga aaatcttata
    14281 ttaaaacaac ctgaatcaca aaaataataa ttttttataa tacataaaat tatatgtatt
    14341 attatgcgta ttaatttt
//
LOCUS       DAPWGO010000036        14245 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.037, whole genome shotgun sequence.
ACCESSION   DAPWGO010000036 DAPWGO010000000
VERSION     DAPWGO010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14245
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.037"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            31..552
                     /locus_tag="RJ336_000980"
     CDS             31..552
                     /locus_tag="RJ336_000980"
                     /inference="COORDINATES: protein motif:HMM:NF021453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2165 family protein"
                     /protein_id="HDZ5213437.1"
                     /translation="MQQKCFCISKMIRFSKIIILLTVASLAGIVVFGNVTDYNSNFQF
                     VSHVMSMDTKPDYLGNAIVYRAITSPVIHHIGYIAIILFETFITLTALKGAYDMFKAR
                     NLDAQSFHNAKIFGIISLTCCCILWFFAFQVVAAEWFGMWMSKVWNGLPDATRLVTYM
                     FLALIFISLKNDD"
     gene            complement(549..2078)
                     /locus_tag="RJ336_000981"
     CDS             complement(549..2078)
                     /locus_tag="RJ336_000981"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDZ5213438.1"
                     /translation="MLQALAIKYRPKTFDELIGQKTVSVSLKYALNHNRLAHAYLFSG
                     LRGSGKTSSARIFSRALVCEQGPSDTPCGTCKHCLAALEGKHIDIIEMDAASNRGLED
                     IQALIEQTKYTPSMARFKIFIIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLK
                     LPATVLSRTQHFRFKQIPQSEILNHLKEILLKENVKFEEEALKFIARSGNGSLRDTLT
                     LLDQAIIFCQNEISISKITDMLGFLDPQKIKAFYQAILTKDKEKVFAYLEELQDYEAS
                     SVIDEMLFYLKESFFAKSTEFSILIYERFFRILSKAKNMLCDDDGFTLCVMAFMMMEA
                     SHLKEIDAQIQEIKQENTTNITPRITPAPIIPNLEKKIEKNAYEILLDSIYDRDFDLA
                     ECFKQSTKFISFENNTLNISSNAQGQNRDTLNKGFKLIQELFKAKFGENAKINVQKAL
                     TIDENKLQSLTQELPNNENKNIDIQSSINMLKEGAKKFDPQEDLKEALKDCFGEPSIE
                     N"
     gene            complement(2082..3380)
                     /gene="rho"
                     /locus_tag="RJ336_000982"
     CDS             complement(2082..3380)
                     /gene="rho"
                     /locus_tag="RJ336_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDZ5213439.1"
                     /translation="MEKEKKQHQRTHVPVEGYKIEELKLLDLENLVKIANECEIENPR
                     EFRRQELIFEILKAQTKKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQ
                     IRKFALRVGDIVTGQVREPKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTE
                     KIKLEYDAMKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELATAIAKNHPEMHL
                     IVLLVDERPEEVTDMQRCVKGEVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVII
                     LLDSITRLARAYNTATPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATAL
                     IDTGSRMDDVIFEEFKGTGNSEIVLDRNIADRRIYPAINIIKSGTRKEELLQGVANLQ
                     KIWAIRSAISQMDDVEALKFLYSKMLKTKDNVELLSIMNE"
     gene            3490..5847
                     /gene="cadA"
                     /locus_tag="RJ336_000983"
     CDS             3490..5847
                     /gene="cadA"
                     /locus_tag="RJ336_000983"
                     /EC_number="7.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cadmium-translocating P-type ATPase"
                     /protein_id="HDZ5213440.1"
                     /translation="MIMKCEHCKLDYKQAQMIEYKGKFFCCKGCESVWEILHESGLDE
                     FYEKLGNQTLSPVNFQNEMKNYDEFITKTKEGFSEIYLMIHGIECAACVWLNEKILTK
                     QEGILELDINHLSHKARIVFDEQSISLVQILRLIESIGYKASAYDASKASKKADLLKR
                     EFYSKLVVAIACVMNIMWIAVAKYAGLFSGMDKDTKDILNFAEFILCSPVLFYTGSHF
                     YKSAFKTLKMHSLNMDVLVISGASLAYVYSLWAMFFRVGEVYFDSVAMIICFVFIGKY
                     LEMFSKKRALDTIDGLNDFLQNEVLVFNGKEFAPKKVQKVCLGDRILLKTGDKILIDG
                     ICKSGEMSVDTSSLNGESIPKLIQKEDEIFSACMVLDGSVEYEATKLYKDSKLSQIIQ
                     LLELASSKKAKLESLVNSLSAYFSRTVLLIAFICFAFWFFYKEESFEISLVNAIAVLI
                     IACPCALALATPVSNLVALGRALKKHILFKSSSVIEDLSKCDCVVFDKTGILTKIELE
                     LKEVFLDKVLDLNELYNFVKLSKHPISQNIASYLKQKGAKDLNLNFKKHSSIQAKGLS
                     AELNEELLLGGSSKFLQEKSIATKEFDNTHFIFAKEGKILAFFEFDSVLREGAKELIA
                     YLKKEKKELMILSGDHQKAVEKIARKLEIQNYQASCLPEDKMKAIENLSKNYKVLFVG
                     DGVNDALALKYASVSMTLREGSDLAIESSDVLLLKNDLLSLKKAIKLSKNTFKIIKQN
                     LAFSLFYNACTIPLAFLGMINPLFAAISMSFSSIIVVLNALRIKE"
     gene            5844..6050
                     /gene="ccoS"
                     /locus_tag="RJ336_000984"
     CDS             5844..6050
                     /gene="ccoS"
                     /locus_tag="RJ336_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HDZ5213441.1"
                     /translation="MNSIIMMMIGVSILAFFIILATLLWGIKNKQFDDDYKFTTLNDD
                     EDSLRDAIELERRKKEALNKKRLS"
     gene            complement(6073..6375)
                     /locus_tag="RJ336_000985"
     CDS             complement(6073..6375)
                     /locus_tag="RJ336_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDZ5213442.1"
                     /translation="MKKLLAVSALACLGVSAFAADGATLFKKCAVCHGANADKVYLNK
                     VPALKTLSSAERLQYMKEYSEGKRNAYGQGAIMKLNLKGLTEEDFKAIEAHIETLK"
     gene            6457..7017
                     /gene="gmhB"
                     /locus_tag="RJ336_000986"
     CDS             6457..7017
                     /gene="gmhB"
                     /locus_tag="RJ336_000986"
                     /EC_number="3.1.3.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-alpha-D-manno-heptose-1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HDZ5213443.1"
                     /translation="MFIFFLKKLYYNVFMKTKALFLDRDGVINIDKKYVYKIEDFEFC
                     DGIFELCRYFLARNYLLFVATNQSGIARRYYKESDFLKLCDYMLKEFAKQDVKIDKIY
                     HCPHLEGCECRKPKAGMLLKAKDEFDLDMKNSIFIGDNLSDMQAGLNANIGTLILVNE
                     EKKEGDFFRQFKNLKEILSFFKEKDI"
     gene            7018..7971
                     /gene="rfaD"
                     /locus_tag="RJ336_000987"
     CDS             7018..7971
                     /gene="rfaD"
                     /locus_tag="RJ336_000987"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HDZ5213444.1"
                     /translation="MKIAITGGAGFMGSQLALNLQEKHEILIIDKMRSSATFENGNLQ
                     SFGHFKNLLEFDGELFAGDINDEKVLKKIKDFRPEIIFHQAAISDTTVFDQTKVLQTN
                     LNTFKDFIELSIDLNAKLIYASSASVYGDAKSPQTVGKDEKPKNPYAFSKLMMDKLAK
                     KYYDKAHLVGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPCLFEGSDQIYRDFT
                     YIKDVISANLIALDSKCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSY
                     QFHTEAKLDQTWDYRPKFTLEEGIKDYLGEIKRLFEKEVNA"
     gene            7964..9349
                     /gene="rfaE1"
                     /locus_tag="RJ336_000988"
     CDS             7964..9349
                     /gene="rfaE1"
                     /locus_tag="RJ336_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HDZ5213445.1"
                     /translation="MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLK
                     EDKRLGGAANVYANLKSLGADVFALGVVGDDKSGKFLQENLKGEFLIQKGRKTPFKNR
                     IMAHNQQVLRLDEEDISAILLENELIALFDEKIKDFKAVVLSDYAKGVLTPKVCKAVI
                     KKAKALNIPVLVDPKGSDFSKYSGATLLTPNKKEALEALKFENLEGENLEKGIKKLKE
                     DFALRYSIITLSEAGIALFDEGLKIAPAKALEVYDVTGAGDSVIAVLAFCLASGIEIF
                     KACELANEAAAVVVSKIGSMSVSFDEIKSFNRVDFEKKIKSKEELLTLLKQNDKKIVF
                     TNGCFDIVHFGHIKYLEKAKRLGDVLIVGLNSDASVKRLKGESRPVNSEFQRACMLAA
                     FYFVDFVVIFDEDTPLELISFLKPDILIKGADYKDKLVVGADIVSKVELIDFEEGFST
                     SKIIEKIKDKK"
     gene            9346..9906
                     /gene="gmhA"
                     /locus_tag="RJ336_000989"
     CDS             9346..9906
                     /gene="gmhA"
                     /locus_tag="RJ336_000989"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDZ5213446.1"
                     /translation="MINLVEKEWQEHQKIAQESEILKGQIAKAGELLCECLKKGGKIL
                     ICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQV
                     EALGNENDVLIGISTSGKSPNVLEAFKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVP
                     SDDTARIQEMHILIIHTLCQIIDEGF"
     gene            complement(9910..10887)
                     /locus_tag="RJ336_000990"
     CDS             complement(9910..10887)
                     /locus_tag="RJ336_000990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213447.1"
                     /translation="MKDMRMQARGLILYKDFDSAIIGTSMLENTSAKEANKKLGGNWI
                     NLSLGGSTFALRAVILDYLFKHKDIKNIIYSLDIRALNELETPKDKNFISLYNDKTID
                     LFKLYLSSRFINCAIFFSKKEKCIGKDNLDTLTNWFLENKNHFGGIEYWSKEWWHDKN
                     FQNEILQAQNFQPNFDIDISHFKNYTKKYLLSFIKKYQKTQFYLIIPSYSRLNYRKLS
                     YGEYYNKDSVLFSNYYAILSWIIQETQKYPNVKIYGFDDLDYADNIKNYKDPAHYNTD
                     MNSMQLNAIRDNTHILNTQNIVKYLNTMERKIKEFDLTPFVEYIKNQNF"
     gene            complement(11035..12534)
                     /locus_tag="RJ336_000991"
     CDS             complement(11035..12534)
                     /locus_tag="RJ336_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002877116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HDZ5213448.1"
                     /translation="MLFSSFTFIFAFLPLTLVGFYILKALQYYTSAKIFLILASLFFY
                     AYFKIDYIFILTFSTLVNFFLANLILRKENNRAGYTLLYLGIIFNLCLLAIFKYTDFF
                     LENFNLFSKLAHLDFNIPLPHILLPLGISFFTFQQIAFLVDCYKKSNIEDLLENKKVD
                     FIDYCLFISFFPQLIAGPIVHHKEMMPQFHSLLNKEKALIDWKLIAKGLFIFSIGLFK
                     KVYIADSFASWANAGFTVVQNGNFLNIFEAWATSLSYTFQLYFDFSGYCDMAIGLALF
                     FGIALPVNFNSPYKALNIADFWRKWHITLGRFLKDYLYIPLGGNRFGKFINLRNLFIV
                     AFLSGVWHGAGWGFVIWGILHAIAMISHRIYSFWAKGKTFLNSKIYKIISWFITFNFI
                     NIAWIFFRSENLQGAINLLKSMFGVIWVELPLKFKAGLLFKKIGGNDTMVGFILVSFI
                     LCICFKNSINMLQDFKSSFKNSLIVMFLFYIALITLIATPYTEFIYFNF"
     gene            complement(12586..13536)
                     /gene="waaF"
                     /locus_tag="RJ336_000992"
     CDS             complement(12586..13536)
                     /gene="waaF"
                     /locus_tag="RJ336_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HDZ5213449.1"
                     /translation="MKIFIHLPTWLGDAVMASPALYAIKEHFKNTQFILYGSLVSTAL
                     FREFPNSKIIIENKQTRYKQALSLRKELGKIDLSFAFRSAFSSKIILHILKTKQRYFF
                     DKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
                     SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCN
                     KTTIKTLCQNIAFCDLFITNDSGPMHISTVYKIKTVAIFGPTKFTQTSPWQNQNAKLV
                     HLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEEIKKLSTP"
     gene            13595..>14245
                     /locus_tag="RJ336_000993"
     CDS             13595..>14245
                     /locus_tag="RJ336_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDZ5213450.1"
                     /translation="MPQLSIIIPLFNSCDFILRALQSCINQTLKDIEILIIDDKSKDN
                     SLNMVLEFAKKDPRIKIFQNEENLGTFASRNLGVLHSSSDFIMFLDSDDFLTLDACEI
                     ALKEMKKGFDLLCFDAFVHRVKTKQFYRFKQDEFFNQKEFLEFLSKQRHFCWSVWAKC
                     FRKDMILKIFEKVKIDERLSYGEDVLFCYIYFMFCEKIAVFKTCIYHYEFNPNGRYE"
BASE COUNT         4810 a         1861 c         2503 g         5071 t
ORIGIN      
        1 ttaccaaaat atattattaa aggagtataa atgcaacaaa aatgtttttg cataagcaaa
       61 atgattagat tttcaaaaat tattattttg cttaccgttg catcgttagc aggtatagtg
      121 gtttttggaa atgtgacaga ttacaattct aatttccaat ttgtttcgca tgtgatgagt
      181 atggatacaa agcctgatta tttgggtaat gctatagttt atagggctat tacttctcct
      241 gtgattcatc atataggcta tatagcaatt attctttttg aaacttttat taccttaaca
      301 gctctaaaag gtgcttatga tatgtttaaa gctagaaatt tagatgccca aagctttcat
      361 aatgctaaga tttttgggat tatttcttta acttgttgtt gtattttatg gttttttgcc
      421 ttccaagtag ttgctgcaga atggtttgga atgtggatga gcaaagtttg gaacggttta
      481 cctgatgcta caagattggt aacttatatg tttttagctt tgattttcat ctctcttaaa
      541 aacgatgatt aattttctat actaggctct ccaaaacaat ctttaagagc ctctttaaga
      601 tcttcttgtg ggtcaaattt tttggcccct tctttaagca tattaataga actttgaata
      661 tctatgtttt tattttcatt gtttggtaat tcttgagtta aggattgaag cttattttca
      721 tcaattgtta gtgctttttg cacattaatt ttagcatttt ctccaaattt agctttaaaa
      781 agttcttgta tgagtttaaa acctttattg agtgtatcgc gattttgtcc ttgtgcgttt
      841 gagcttatat ttaaggtatt gttttcaaaa ctaataaatt ttgtgctttg tttaaagcat
      901 tctgcaagat caaaatccct atcataaata ctatcaagca agatttcata agcatttttt
      961 tctatttttt tctcaagatt aggtatgata ggagcaggtg tgatcctagg tgtaatattt
     1021 gttgtatttt cttgtttgat ttcttggatt tgtgcatcaa tttcttttaa atggcttgct
     1081 tccatcatca taaaagccat aacacaaagc gtaaagccat catcatcgca aagcatattt
     1141 ttagcttttg ataaaatacg gaaaaatctt tcataaatta aaatagaaaa ttctgtactt
     1201 tttgcaaaaa agctttcttt taaataaaaa agcatttcat caatcacgct tgaggcttca
     1261 tagtcttgta attcttctaa gtatgcaaaa actttttcct tgtcttttgt taagatagcc
     1321 tgataaaagg ctttgatttt ttgaggatct aaaaagccta acatatcggt aatcttgcta
     1381 atgctgattt cattttggca aaaaataatg gcttgatcaa gcaaggttaa agtatctctt
     1441 aaagatccat tgccacttct tgctataaat tttaaagctt cttcttcaaa tttaacattt
     1501 tctttaagta aaatttcttt aagatgattt aaaatttcac tctgtggaat ttgtttaaag
     1561 cgaaaatgtt gcgttcttga aagcacagta gctggaagtt ttaaaggatc tgtggttgca
     1621 agtataaatt taacataact tgggggttct tctaaggttt ttaaaagtgc atttgcagcc
     1681 tgtggggtaa gcatatgtac ttcatcaatg atgaaaattt taaatcttgc catagaaggg
     1741 gtgtatttgg tttgttcgat taaggcttgt atatcttcaa gcccacggtt acttgcagca
     1801 tccatttcta taatgtctat atgtttgcct tcaagtgctg caagacagtg tttgcaagtg
     1861 ccacatggag tatcgcttgg tccttgttcg caaactaaag cacgagaaaa aattctagca
     1921 cttgaagttt ttccacttcc tctaagtccc gaaaaaagat aagcatgagc taagcgatta
     1981 tgatttaggg cgtattttaa acttacacta actgtttttt gtcctatgag ttcatcaaag
     2041 gtttttggcc tgtatttaat cgctaaagct tgaagcattt tttactcgtt cattatagat
     2101 aaaagttcta cattgtcttt ggttttaagc attttagaat ataaaaattt caacgcttca
     2161 acatcatcca tttgagaaat cgctgaacgg atcgcccaaa ttttttgaag atttgccacg
     2221 ccttggagta attcttcttt tcttgttcct gatttgatga tattaattgc aggataaatt
     2281 cttctatcag cgatatttct atcaagaact atttcgctat ttcctgtgcc tttaaattct
     2341 tcaaaaatca catcatccat tcttgaacct gtgtcaatta aagctgtagc aactatggtt
     2401 aaagagcctc cattttctat atttctagct gcaccaaaga aacgttttgg tttgtgtagg
     2461 gcattagcat ccaccccgcc gcttaggact tttccactgc ttggagttgc ggtgttgtaa
     2521 gcacgtgcca gtcttgtgat gctatcaagc aggataataa catcttttcc tgtttctacc
     2581 attcttttgg ctttttctat tacgagttca gctacacgca catggttata agcaggtaaa
     2641 tcaaaagtag agctaaaaac ttcgcctttt acacatcttt gcatatcggt aacttcttca
     2701 ggtctttcat caactaaaag cacaattaaa tgcatttcag gatggttttt tgcaatagca
     2761 gtagcaagtt ctttcataag ttctgtttta cctgtgcgtg gtggagcaac gatgagccca
     2821 cgttgtcctt ttcctatagg ggtaaaaaga tctaaaacac gacccgtaag cttcatcgca
     2881 tcgtattcga gtttgatttt ttccgttgga aaaatagggg ttaagttatc aaataaaggt
     2941 ctttctttgg cttcttgtaa aggcagataa ttgatcgctt cgatttttaa aagagcatag
     3001 tatttttctt gatctttagg ttctctaact tgtcctgtaa cgatatcgcc tacacgcaga
     3061 gcaaattttc taatttgtga atttgaaaca taagcgtcat taacactatc gctaagatta
     3121 gagtccatac ctcttaaaaa gccataacct tcggaagaaa tttctaaaat ccctgtaaaa
     3181 agtataaaac cgcctttttt tgtttgtgct tttaaaattt caaaaataag ttcttgacgg
     3241 cgaaattctc ttgggttttc gatttcacat tcattagcga ttttaactag attttctaga
     3301 tctaataatt ttaattcttc gattttataa ccttccactg gaacgtgggt tctttgatgt
     3361 tgtttttttt ctttttccat aagtcctcgt aagatttagc agaataattt ttgtaaaatg
     3421 tgattttagt aaaaaaatgc actttttgtc aaattttgtt tataattata aaaaatattt
     3481 ttttaaagaa tgattatgaa atgtgaacat tgcaaacttg attataaaca agctcaaatg
     3541 atagagtata agggtaaatt tttttgttgt aagggttgtg agagcgtttg ggaaatttta
     3601 catgaaagtg gactagatga gttttatgaa aagcttggaa atcaaaccct aagccctgta
     3661 aattttcaaa atgaaatgaa aaattatgat gagtttatca ctaaaaccaa agaaggattt
     3721 agtgaaattt atctcatgat acacggtata gaatgtgcag cttgtgtgtg gcttaatgag
     3781 aaaattttaa ccaagcaaga aggaatttta gaacttgata tcaatcattt aagccataaa
     3841 gcacgcattg tttttgatga acaaagcatt tctttggtgc aaattttaag acttattgaa
     3901 agtataggct ataaagcgag tgcttatgat gcgagcaagg cttcaaaaaa agcggattta
     3961 ttaaaaaggg aattttattc taagcttgtc gtagctatag cttgtgtgat gaatatcatg
     4021 tggatagcag tggcaaaata cgcaggactt tttagcggta tggataagga tactaaggat
     4081 attttaaatt ttgctgaatt tatcctttgt tctcctgtgc ttttttatac gggctctcat
     4141 ttttataaaa gtgcttttaa aactttaaaa atgcatagtt taaatatgga tgtattggtg
     4201 attagcggag cgagtttggc ttatgtttat tctttatggg ctatgttttt tagggtgggg
     4261 gaagtgtatt ttgattctgt ggcgatgata atttgctttg tgtttatagg aaaatatctt
     4321 gagatgttta gcaaaaagcg tgctttagat accatagatg ggcttaatga ttttttacaa
     4381 aatgaagttt tagttttcaa tggtaaagaa tttgctccta aaaaagttca aaaggtttgt
     4441 ttaggggata gaattttgct taaaactgga gataaaattt taatcgatgg gatttgtaaa
     4501 agtggtgaaa tgagtgtgga tacttcttct ttaaatggag aaagtattcc aaaactcata
     4561 caaaaagaag atgaaatttt ttcagcttgt atggtgcttg atggaagtgt ggagtatgaa
     4621 gcaacaaagc tttataagga ttcaaaactc agtcaaatta ttcagctttt agaacttgca
     4681 agttctaaaa aagcaaaact tgaaagtttg gttaatagtc tttcggctta tttttctaga
     4741 acggttttat tgatcgcttt tatttgtttt gctttttggt ttttttacaa agaagagagt
     4801 tttgaaattt ctttagtcaa tgcgattgca gttttgatta tcgcttgtcc ttgtgctttg
     4861 gctttagcaa cgcccgtgag caatcttgtg gccttaggta gggctttaaa aaagcatatt
     4921 ttatttaaaa gttctagtgt gatagaagat ttaagcaaat gtgattgtgt ggtgtttgat
     4981 aaaacaggta ttttaactaa aatagagctt gaacttaaag aggttttttt agataaagtg
     5041 cttgatttaa atgagcttta taattttgta aaactttcta aacatcctat atctcaaaat
     5101 attgcgtcgt atttaaagca aaaaggagct aaggatttaa atttgaattt taaaaagcat
     5161 tcaagtattc aagctaaagg tttaagtgct gagttaaatg aagagttgct tttaggcgga
     5221 agttctaaat ttttgcaaga aaagagtatt gcaactaagg aatttgataa tactcatttt
     5281 atttttgcta aggaaggtaa aattttagct ttttttgagt ttgatagtgt tttaagagaa
     5341 ggtgcaaaag agcttatcgc ttatcttaaa aaagaaaaga aagaattaat gatacttagt
     5401 ggcgatcatc aaaaagcagt ggaaaaaatc gctagaaagt tagaaattca aaattatcaa
     5461 gcttcttgtc tacccgagga taagatgaaa gctatagaaa atttaagcaa aaattacaaa
     5521 gttttatttg taggtgatgg ggtaaatgac gctctagctt taaaatatgc aagtgtttcg
     5581 atgactttaa gagaaggaag tgatctagct atagaaagta gcgatgtttt gcttttgaaa
     5641 aatgacttgc tttctttaaa aaaagccatc aaattatcta aaaacacctt taaaattatc
     5701 aagcaaaacc ttgctttttc tttgttctat aatgcttgta ccataccttt ggctttttta
     5761 ggtatgatta atcctttatt tgctgctatt tctatgtctt ttagtagtat aatagtcgtt
     5821 ttaaatgctt taaggatcaa agaatgaata gtataatcat gatgatgata ggagtttcta
     5881 tcttagcgtt ttttatcatt ttggcaactt tgctttgggg gattaagaat aaacaatttg
     5941 atgatgatta taaatttact actttaaatg atgatgagga ttctttacgt gatgctatag
     6001 aattagaaag gcgtaaaaaa gaagctttga ataaaaaaag gctttcttaa aaagaaaagc
     6061 cttttttaga aattatttta aagtttcaat atgagcttcg atagctttaa aatcttcttc
     6121 agttaaacct ttaaggttaa gtttcatgat cgcaccttga ccataagcat ttcttttgcc
     6181 ttctgaatat tctttcatgt attgaagtct ttcagcagaa gaaagagttt ttaaagctgg
     6241 aactttgttt aagtaaactt tgtcagcatt tgcaccatga catactgcac attttttaaa
     6301 aagtgtagca ccatctgcag caaaagcaga aacaccaaga catgccaaag cagaaactgc
     6361 taataatttt ttcatttgtt ttctccttag taaaaattag attgctaggt attatatatc
     6421 tttattttta ataaaaatct taagaaatta aagataatgt ttattttctt tttaaaaaag
     6481 ctatattata atgtttttat gaaaacaaaa gcattatttt tagatagaga cggtgtgatt
     6541 aatatagata aaaaatatgt ctataaaata gaagatttcg aattttgtga tggaattttt
     6601 gaactttgta gatatttttt agctagaaat tatttgcttt ttgtagcgac aaatcaatca
     6661 ggtattgcaa gaagatatta caaggaaagt gattttttaa agctttgtga ttatatgctt
     6721 aaagaatttg ccaagcaaga tgtaaaaatt gataaaattt atcattgtcc gcatttagaa
     6781 ggttgtgagt gtcgcaaacc taaagcaggt atgcttttaa aagcaaaaga tgagtttgat
     6841 ttggatatga aaaattctat ctttatcgga gataatctaa gcgatatgca agcagggtta
     6901 aatgctaata ttggcacttt gattttagta aatgaagaaa aaaaagaagg cgattttttt
     6961 agacaattta aaaatttaaa agaaattttg agctttttta aagaaaagga catttaaatg
     7021 aaaatagcaa tcacaggtgg cgcaggattt atgggttcgc aactagcttt aaatttgcaa
     7081 gaaaaacatg aaattttaat catcgataaa atgcgtagta gtgcgacttt tgaaaatgga
     7141 aatttgcaaa gttttgggca ttttaaaaat ttgcttgaat ttgacggaga actttttgca
     7201 ggcgatatta atgatgaaaa agttttaaaa aagattaagg attttagacc tgaaattatt
     7261 tttcatcaag cagcaatttc agacactacg gtttttgatc aaactaaggt tttacaaacc
     7321 aatttaaata cttttaaaga ttttatagaa cttagcatag atcttaatgc aaagcttatt
     7381 tatgcaagtt cagcttcagt ttatggcgat gcaaaaagtc cgcaaaccgt aggtaaagat
     7441 gaaaaaccaa aaaatcctta tgctttttca aaattgatga tggataaact agcgaaaaaa
     7501 tactacgata aagcccattt ggtaggactt agatatttta atgtttatgg aaaaggcgaa
     7561 ttttataaaa acaaaaccgc ttctatggtt ttgcaatttg gccatcaaat tttagcagga
     7621 aaaaatccat gcttgtttga aggaagtgat caaatttata gagattttac ttatattaaa
     7681 gatgttatta gtgccaattt aatcgccctt gattcaaaat gcggggttta taatgtaggc
     7741 agtggtaaag caagaacttt tcaagatata gttgatattt tgcaaaaaga gttaaagact
     7801 gatttgcctt gcgaatatat cccaaatcct tatgtaaaat cttatcaatt tcataccgag
     7861 gcaaaactag atcaaacttg ggattatcgg ccaaaattca ctttagaaga gggtataaaa
     7921 gattatttag gcgagataaa aagacttttt gaaaaggaag taaatgcttg agtttttaag
     7981 tcagcaaaaa cctaaaattt taattatagg ggattttatg gtggataatt acacttggtg
     8041 tgattgttcg cgtatcagtc ctgaagcccc tgttttggta gctaaaaccc ttaaagaaga
     8101 taaaagatta ggcggggctg cgaatgttta tgcaaattta aaaagcttgg gagctgatgt
     8161 ttttgcgctc ggtgttgtgg gtgatgataa gagtgggaaa tttttacaag aaaatttaaa
     8221 aggagaattt ttgatccaaa aaggacgcaa aacccctttt aaaaatcgca ttatggcaca
     8281 caatcagcag gttttaagac tagatgaaga agacataagt gcaattttgc ttgaaaatga
     8341 acttattgct ttgtttgatg aaaagattaa agactttaag gctgtggttt taagcgatta
     8401 tgccaaaggt gttttaaccc ctaaagtttg taaggctgtg ataaaaaaag ctaaggcttt
     8461 aaatattcct gttttagttg atcctaaagg cagtgatttt agtaaatata gcggtgcaac
     8521 cttactcacg cctaataaaa aagaagcttt agaggctttg aaatttgaaa atttagaggg
     8581 tgaaaattta gaaaaaggga ttaaaaaatt aaaagaagat tttgctttgc gttattctat
     8641 catcactctt tcagaagcgg ggatcgcact ttttgatgag ggtttaaaaa ttgcacctgc
     8701 taaagcttta gaagtttatg atgtaacagg ggcgggcgat agtgtgatcg cagttttggc
     8761 tttttgtttg gcaagtggga ttgaaatttt taaagcttgc gaacttgcca atgaagccgc
     8821 agctgttgta gtgagtaaaa taggtagcat gagtgtgagt tttgatgaga ttaagagttt
     8881 taatcgtgtg gattttgaga aaaaaattaa aagcaaagaa gaacttttaa cgcttttaaa
     8941 acaaaatgat aaaaagatcg tttttacaaa tggttgtttt gatatcgtgc attttggaca
     9001 tataaaatac cttgagaaag ctaaaagatt gggcgatgtt ttgattgtgg gcttaaactc
     9061 agatgcgagt gtgaaaagac tcaaaggcga gagtcgtcct gtaaattcag agtttcaaag
     9121 agcttgtatg ttggcagctt tttattttgt agattttgta gtgatttttg atgaagacac
     9181 acctttagaa cttataagct ttttaaaacc cgatattttg attaaaggag ctgattataa
     9241 agataagctt gttgtgggtg cagatatcgt ttcaaaggtt gaattaatcg actttgaaga
     9301 aggatttagt acgagtaaga tcatagaaaa gattaaggat aaaaaatgat aaatttagtg
     9361 gaaaaagaat ggcaagagca tcaaaaaatc gctcaagaaa gtgaaatttt aaaaggacaa
     9421 atcgctaaag caggagagct tttgtgcgag tgtcttaaaa aaggtggcaa gattttgatt
     9481 tgtggaaacg gtggaagtgc ggctgatgca cagcattttg cagctgaact tagtgggcgt
     9541 tataaaaaag aacgcaaggc tttggcaggt atagcgctta caaccgatac ttcagcactt
     9601 agtgctatag gaaatgacta tggttttgag tttgtttttt caagacaagt ggaagcttta
     9661 ggaaatgaaa atgatgtttt aatcggtatt tcaacgagcg gaaaaagccc taatgtttta
     9721 gaagctttta aaaaagcaaa agaacttaat atgctttgtt tagggcttag tggaaagggt
     9781 ggtggaatga tgaataagct ttgtgaccat aatcttgttg taccaagcga tgatacagct
     9841 agaattcaag aaatgcacat tttaatcata cacacacttt gccagattat agatgaaggt
     9901 ttttaatttt caaaaatttt gattttttat atactctaca aatggtgtta agtcaaattc
     9961 tttaattttc ctttccattg tattaagata tttaactata ttttgggtat ttaaaatatg
    10021 cgtattatct cttatggcat taagttgcat agagttcata tcagtattgt agtgtgcagg
    10081 atctttataa ttttttatgt tgtcagcgta gtccaaatca tcaaatccat atatttttac
    10141 attaggatat ttttgagttt cttgtataat ccaacttaaa atagcataat agtttgaaaa
    10201 tagaacacta tctttattat aatattcccc ataactgagt tttctatagt ttaatcttga
    10261 ataacttggt ataataagat aaaactgcgt tttttgatat tttttaataa aacttaagag
    10321 atattttttt gtataatttt taaaatgtga aatatctata tcaaaatttg gttgaaaatt
    10381 ttgagcttgt aaaatttcat tttgaaaatt tttatcatgc caccattctt tactccagta
    10441 ttcaatacct ccaaagtggt ttttattttc taaaaaccaa tttgttaaag tatctaaatt
    10501 atcttttcct atacattttt ctttttttga aaaaaatata gcacaattaa taaaacgact
    10561 tgagagatat aatttaaata aatcaatagt tttatcattg tagagtgaaa taaagttttt
    10621 gtctttgggg gtttcaagtt catttaaagc tctgatgtct aaagaataaa taatgttttt
    10681 aatatcttta tgtttaaata aataatctaa aattaccgct cttaatgcaa atgtgcttcc
    10741 acctaaagat agatttatcc aattacctcc tagttttttg tttgcttctt tagcagaggt
    10801 attttcaagc atagaagtgc ctattatggc agaatcaaaa tctttgtaca gaatgagtcc
    10861 tctagcttgc attctcatat ctttcatgta agtttctttt ctaaaatatg gtggatgaaa
    10921 gaaccaaaaa ggatcgcgaa tataaagcaa tgtaaaaaga attattacga gaggcaaagg
    10981 acataataaa gaaaaaagaa tgaatttttt attagaagca aacaatattt ttccttaaaa
    11041 attaaaatag ataaattcgg tatatggtgt agcaataaga gtaattaaag ctatataaaa
    11101 taaaaacatt acaataaggg aatttttaaa gctcgactta aaatcttgaa gcatattaat
    11161 gctattttta aaacaaatac atagtataaa ggagactaaa ataaaaccta ccattgtatc
    11221 atttccgcct atttttttaa ataaaagccc tgctttgaat tttaacggca attccaccca
    11281 aattacccca aacattgatt ttaagaggtt tatagcccct tgtaaatttt cgcttctaaa
    11341 gaaaatccaa gctatattga taaaattgaa agtgataaac caagatataa ttttataaat
    11401 tttcgaattt aaaaaagttt tgcctttagc ccaaaaacta taaattctat ggcttatcat
    11461 agctatagcg tgtaaaattc cccatataac aaaaccccat ccggctccat gccatactcc
    11521 gcttaaaaaa gctacgataa aaagatttcg tagattgata aattttccaa agcgatttcc
    11581 tccaagaggg atgtataaat aatcttttaa aaatcttcct aaagtaatat gccattttcg
    11641 ccaaaaatca gctatattta aagctttata tggagaatta aaatttacag gtaaagctat
    11701 accgaaaaaa agagctaatc ctatagccat atcacaatat ccactgaaat caaaatagag
    11761 ttgaaaagta tacgaaaggc ttgttgccca agcctcaaaa atatttaaaa aatttccatt
    11821 ttgcacaact gtaaatcctg catttgccca agaagcaaaa ctatcagcta tgtaaacttt
    11881 tttaaaaagt cctatagaaa atataaacaa gccctttgct attaatttcc aatcgattaa
    11941 agctttttct ttattaagta aagaatgaaa ttgcggcatc atttctttat gatggactat
    12001 aggacctgcg ataagttgcg gaaaaaaact gataaataag caataatcta taaaatcaac
    12061 ttttttattt tctaataaat cctcaatatt acttttttta taacagtcca ctaaaaatgc
    12121 aatttgttga aaagtgaaaa atgaaattcc taaaggtagt aaaatatgtg gtaaaggaat
    12181 attaaagtct aaatgagcaa gtttggaaaa aagattaaaa ttttccaaaa aaaaatctgt
    12241 atatttaaag attgctagta agcaaaggtt gaagataata cctagataaa gtaaagtata
    12301 tcccgcccta ttattttctt ttcttaagat aaggtttgca agaaaaaaat ttaccaaggt
    12361 tgaaaaggtt aagatgaaaa tataatcaat tttaaaatag gcataaaaaa ataaactagc
    12421 taatattaaa aatatttttg cacttgtata atattgcaaa gcttttaata tgtaaaagcc
    12481 taccaaagtt aaaggcaaga aggcaaaaat aaaagtaaaa gagctaaaaa gcataaacaa
    12541 ccttataaaa ttttacaata gttttttatt ctaactaaaa tttttttatg gagtgcttaa
    12601 ttttttaatt tcttctatca ccttttcagg ctttagatct ttcatgcatt tatggtgctt
    12661 taaaggacag gttttttgca tacaaggcat acaagctaga tctaaatgca ctaattttgc
    12721 gttttgattt tgccaaggtg aagtttgagt aaatttcgta gggccaaaaa tagccacggt
    12781 ttttatctta taaaccgtac ttatgtgcat aggaccactg tcatttgtga tgaaaagatc
    12841 gcaaaaagcg atattttgac aaagggtttt gatggtggtt ttattgcaaa gattttttac
    12901 ttttatgttt tgttctttta aaatttgata aatttcatta caaagttctt gttcggcttt
    12961 tcctgcgcca aagattaaaa tttcatgact ttggctgaaa tttaaagcca ctttagcaaa
    13021 ataactcgca tcccatcttt ttgcacttcc aaagcttgcg ccagggttga gtcctagaat
    13081 ttttttacca ttttttaaga taagagggtt ttgaaatttt agcttaaagg gaagctttaa
    13141 gtctttaaaa tgagctttta tactaagtga gttttctata aaataaaggt attttaaaac
    13201 ttgatgttct tctttgtgct tgtttttgtc aaaaaaatat ctttgttttg ttttgagaat
    13261 atgcaagata atcttagaag aaaacgcaga tctaaaagca aagctaagat cgattttacc
    13321 aagttctttg cgtaaagata gggcttgttt gtagcgggtt tgtttatttt ctatgatgat
    13381 tttagaatta ggaaattccc taaaaagtgc tgtggaaacc aaagagccat aaaggataaa
    13441 ttgggtattt ttaaaatgtt cttttatagc gtataaagca ggtgaagcca tcactgcatc
    13501 gcctagccaa gtgggaaggt gtataaaaat tttcataaat ttcctaaact ttgatagaat
    13561 tgtttttatt attttaacaa aatttaggaa aaatatgcca caactttcga tcataatccc
    13621 gctttttaat tcttgtgatt ttattttaag ggctttacaa agttgtataa atcagacttt
    13681 aaaagatatt gaaattttga ttatcgatga taaaagtaaa gataatagtt taaatatggt
    13741 tttagaattt gctaaaaaag atccaaggat aaaaatcttt caaaatgaag aaaatttagg
    13801 cacttttgca agtagaaatt tgggagtttt gcattctagt tctgatttta taatgttttt
    13861 agatagtgat gattttttaa cacttgatgc ttgtgaaata gcacttaaag agatgaaaaa
    13921 aggttttgat ttactttgct ttgatgcttt tgtacatagg gtaaaaacca agcaatttta
    13981 tcgttttaaa caagatgagt tttttaatca aaaagaattt ttagaattct taagcaaaca
    14041 aaggcatttt tgctggtcgg tttgggcgaa gtgttttaga aaagatatga tcttaaaaat
    14101 ttttgaaaaa gttaaaatcg atgagcgttt gagttacggc gaagatgtgc ttttttgtta
    14161 tatttatttt atgttttgtg agaaaatagc tgtttttaaa acttgcattt atcattatga
    14221 atttaatcca aatggaagat atgag
//
LOCUS       DAPWGO010000037        14111 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.038, whole genome shotgun sequence.
ACCESSION   DAPWGO010000037 DAPWGO010000000
VERSION     DAPWGO010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14111)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14111)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14111
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.038"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(166..2229)
                     /locus_tag="RJ336_000994"
     CDS             complement(166..2229)
                     /locus_tag="RJ336_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDZ5213451.1"
                     /translation="MIEEILKDSDYKLDLFSKKAIAELETKIIAKTNKNNQIIYYTNC
                     LIRDKEIKLTPEEIVRQLYIDKLLNEYNYPKDMIKIEFGVHFGREVKRADIVIMDKIQ
                     ITVPYIIIEVKKPKLKDGKEQLKSYCNATGATMAVWCNGKEISYYHRKDPNYFESIPN
                     IPASNQTLPDLLKVKFTFDDLIKEDILKSQKRSLKNLVTEMEDEVLANAGVDVFEECF
                     KLIFIKLFDELEGARDRTKSLEFRNYGESDSELKQKIEKLFDKAKKKWEGVFNNDEKI
                     KLSPSHLSVCVSSLQNVKLFNSNLEVIDDAFEYLVNKSSKGEKGQYFTPRYVIDMCVK
                     MLNPKKDESMIDTASGSCGFPIHTCFYVWRSIYKERGIEASHLFTAQEKISECQDYVK
                     EKVFGIDFDEKSVRVSKMLNLIAGDGHTNVLYLNSIDFDRWDEWVKDDEDWQDVYFEG
                     FKRLKNLRVTKNQNRDFNFDVLMANPPFAGDIKESRILARYELGKKENGKPQSKVGRD
                     ILFIERNLDMLKPGGRMAIVLPQGRFNNSSDKYIREFIAQKARILAVVGLHGNVFKPH
                     TGTKTSVLFLQKWDDKLCPKCEDYNIFFATMNEPSKDNSGEKIYYPLLDSHDHLVVKH
                     DLFHPHLEGDEPIKQKDESQEEFDKRIQEYRLNVEKYKDLQKDGIAEAFIEFAKAENL
                     SFWKE"
     gene            complement(2239..3336)
                     /gene="dapE"
                     /locus_tag="RJ336_000995"
     CDS             complement(2239..3336)
                     /gene="dapE"
                     /locus_tag="RJ336_000995"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDZ5213452.1"
                     /translation="MNAKEFLIELLKFKSVTPNDDGALNFIAMELSDFEAFFIEKEGI
                     KNLLLTKKFNDEGEHLAFGGHVDVVPAGEGWKNDPFEPLEEEGFIYARGAQDMKSGVA
                     AFIDAVKDVSFKGRRLSLILTSDEEGEAKYGTKAVLEWMKEKNMLPDYAVVAEPTCVK
                     KMGDSIKIGRRGSINGKLLIRGKQGHVAYPEKCINPVHDFAPVLKLLAGFDLDPGSAE
                     FSPSKIVITDIRGGMGVCNVTPNDLKLMFNVRNSPDTSLEDVKSYVEKICHGLNYELE
                     LKQSSEAFLTNIDNKIVQKMNESVQKITHEVPELNTKGGTSDARYFAKYGVKVVEFGV
                     CNDRIHAIDERVSIEEFEKLCLVFKDLIENF"
     gene            complement(3341..3940)
                     /locus_tag="RJ336_000996"
     CDS             complement(3341..3940)
                     /locus_tag="RJ336_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HDZ5213453.1"
                     /translation="MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGA
                     FSIDMLYLFLLQFGLLNFLDNVIFMRFLAIFGFCFLTYMAYLMLRKKKESLNLEHKEF
                     KESLLKSYIKGIILNGSNPYVIGFWLSATGIVLSNQHTYSTILGLVVAILFWIGALAF
                     VVAKYSYLFSAKVIRIINIVSALIIEYFALSLLYKTFIG"
     gene            complement(3933..4634)
                     /locus_tag="RJ336_000997"
     CDS             complement(3933..4634)
                     /locus_tag="RJ336_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HDZ5213454.1"
                     /translation="MKNIMILSGAGLSAPSGLKTFRDNDGLWEEYDVMEVCSATGFRK
                     NPKKVLDFYDARRAQLQNVKPNHAHEKIAQLKEKWGKNLFVITQNVDDLLERAGCKDV
                     IHLHGFLPELRCLKCEGIFNIGYEKFTDKQCPKCKSKDLRHNIVMFEEQAPAYATLYS
                     LLHQTSLFISIGTSGAVLPVGQYASMCEKSILNIYEKDVNLERYFDKIYIEDIISAID
                     KITLDIENFMKDGNV"
     gene            complement(4677..8516)
                     /locus_tag="RJ336_000998"
     CDS             complement(4677..8516)
                     /locus_tag="RJ336_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDZ5213455.1"
                     /translation="MITKDNLKQVLENLGFKNKNENYVKTINNYTLLIDYKNQSINYP
                     KEIKIHDKTTSNFSHPENFVVFECVHRLLEKGYKAEYLELEPKWNLGRDKKGGKADIL
                     VKDNENNPYLIIECKTTDSKNSEFIKEWNRMQEDGGQLFSYFQQEKGVKYLCLYTSDF
                     SDKLEYKNYIIQAYDNEEYLKEKEIQNSYKKSNNNIELFKTWKESYELQYFKQGIFEE
                     NVNAYKILEITPTFDNLKELKEEGKYHEFAKILRKHNISGKENAFDKLVNIFLCKIYD
                     ETFNKNNLKFGYFGVMADTYANMQDRLMWLYKEAMKEFLGEKITFVSNEDIEKDFKQL
                     KIKTLKEVMQNYIKELKFYSNNDFAFLEVHNKELFLKNALVLKEIVELFANYKLTQNS
                     TNQFLGNLFELFLQKGMKQDEGQFFTPIQICEFIMYSLPLHEMLSKNSKALRVIDYAC
                     GAGHFLNTYANELKRYLTEDELKEHYKNIYGIEKEYRLSKVSKVSSAMYGQNEINILY
                     ADALASFELANTNNLEGEKAKPQIESNSFDLLIANPPYSVKGFLETLSDKSKNTYKLF
                     NDDINIETNNSIECFFCERANQILNDNAKAAIILPSSILNKDSIYKNTREILFQNFDF
                     IAIVELGNQTFGATGTNTIILFLRKKETFKQENHLISQDYSLIKERIEAENLKDNESF
                     YQNYLSAYCDFRKFDKELYSNFLNGNLDSKLAELEAFKDYRNAFRQTSDYKKLKESKI
                     YKESKDKQDLEDKAFLAYTQAIEKDKLLYFCLSLNQEVLIIKSPSDIKEQKKFLGYEW
                     SNRKGDEGLKELHEPYLSPLFERGNPQNETKLNTLIYKSFLNTLDVIPQELQTYATKA
                     RLVDMIDFEKVEFNKAISLNPKTQREEIKSQYPLVKLKICGDFFMGGTPSRKNINYWN
                     GDIKWLTISDYSNHQVIMDTKEKITREGFKNSNAKMIQKGAVVVSIYATIGRVGILGE
                     DMTTNQAIVAIIPNEEFINKYLMYAIDYFKFQLYNEVITTSQQNINLGILQNMVIPKP
                     PLEIQKQIVAECEKIEEQYNTLSLSIKEYQNLIKAMLQKCGIIEDSQEYELNSILDKI
                     NNLCKINLDSEFLSSFNKTIKEYALSNPIFKLSIGKRVLNNELLENGQIPVYSANVLE
                     VFGFVNKEILQDYDNDSVLWGIDGDWMVGFIPKNKKFYPTDHCGVLRVDDTKINAKYI
                     SFILNEAGKKQGFSRKLRASIDRIKALRVKLPSLEFQDQIADIIDKIEKKINEYKIEL
                     DRLEKEKEKILQKYLFS"
     gene            complement(8525..10735)
                     /locus_tag="RJ336_000999"
     CDS             complement(8525..10735)
                     /locus_tag="RJ336_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HDZ5213456.1"
                     /translation="MMNDTKEELISKLDLNSYLEEFKALFARDKEIFLQGDSNLHFKR
                     IHELCEVEFPTIPELSNLDKALVHLSKQGILHLDEIFEFVKIFRYFEKLKKIKLGTNL
                     DSWLQKIEFVSGALELCLNFDEKGELKESLDERLVNLNAALRLKNESIIAEFKKFCYT
                     KALMPYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSNGGGFYIVPLSVENLQNDI
                     EKIKNQKEEIYYEYAKNFSAFLAKNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVL
                     CDQSTDLVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSMLLKSMLSAAFLAKH
                     LLPMHIKASESKIGTFKEFDAIIEDPQNVKNDISTFAGRMLHFSRLFSKKNLLLGIDE
                     IELGTDFEEAACLYSVLISKLIANNLKIIITTHHKRLAMLLAKNEQVELIAALYDEEL
                     SRPKYEFLKGTIGKSYAFETALRYQIPPNLVSEAKKLYGEDKENLEELVGKNINLELE
                     LKAKLENVEKKEQKVDEILLSLKEQKEKNEQEFRTSLRNLEFKFHKAIEEAKKTIQLK
                     DIKDKQRSLNKANELKKEIILPSMEQNEELRVGDFVKYEKIKGKIISISKNDAMVESD
                     GIKLRVPLKLLKKSTPTPKISPKTSISVAKPTNLSVSLDLHGLRSDEAISRLDKFISD
                     ALLAGFDEVLVYHGIGTGKLAFAVREFLKTHKSVKGFNDAPINQGGFGAKVVRL"
     gene            complement(10725..11075)
                     /locus_tag="RJ336_001000"
     CDS             complement(10725..11075)
                     /locus_tag="RJ336_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213457.1"
                     /translation="MSRFFLYLLIILILALITFALREKLGKKTKPFFGILLVIFIVLA
                     VFFEFENTQKSHLRTDIIVAFNQNKNILCKDINVSKAYFNYEFGTGSFISKDNNQSFN
                     SLIIDIKDCRLNDE"
     gene            complement(11068..12366)
                     /locus_tag="RJ336_001001"
     CDS             complement(11068..12366)
                     /locus_tag="RJ336_001001"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDZ5213458.1"
                     /translation="MMQNIHFIGIGGIGISALARFLKEKGFKISGSDLKESKITKELE
                     KEGVKVSIPHHKDNILNKDLVIYSAAIKEENPEFKHAKELGIKCLSRKEALPLILEDK
                     RVFAVAGAHGKSTTSSILASLLDDASVIIGAILKEFGSNMIYKESQNLVFEADESDSS
                     FLNSNPYLAIVTNAEAEHLDHYGNEVSKLHYAYTQFLDTAKIRVINAEDEFLKNYKNE
                     SIKLYPSKDIKNCTMCIENFKPFTSFELKDLGEFKVFGMGYHLALDASLAILAALNFL
                     DIETIRTRLKNYQGIKKRFDILHADENLVLIDDYGHHPTEIKATLSAAQEYAKLGGYK
                     KITAIFEPHRYTRLAANLKEFAKAFEGVDELIILPVYAAGEKPIELDLKAVFPKALFV
                     EDIKREGKFLVASKGQVFEEGLIIGFGAGDISNKLRQKNE"
     gene            complement(12430..13938)
                     /locus_tag="RJ336_001002"
     CDS             complement(12430..13938)
                     /locus_tag="RJ336_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HDZ5213459.1"
                     /translation="MLIFGVFVVFLNLKILNLKLKPVNLRLFPLIALNLILIIVYVVA
                     LRGPFKHVAINVQNYSFSEYSVVNDTMLNPIMAFSWALKQYKEEAALKAITSLKAQEL
                     KEKLFDYLHQSPINLKAEKNHPSVFVNLMESFGLNLADFANTEHNFLGSLDKHFKQDF
                     LFKRFLSSSNGTIPSFANLFFVSPFSNISTSKFQKTYLDLTPIAIYKKAGYKVIFVSA
                     GNGSWQNIKNYLGILGVDEIIDENILMKEYNGAKDSENGYGVADEFLYKKVYDLLQKN
                     PHNTLIIALTISNHPPYKIPQNDLPKLENIPQTLLNMLPYEKDKQDNIIKAYTYANNE
                     FGKFLDKVKQSPFKNSVIIAATGDHRVREMSMDLNSQKAFAYSVPFYLYIPKDLQDNI
                     YYDKDRVGSHKDIFPTLYALSLNNVKYLSVGGRNMLARSSDEKLEFGINDAVWIDKKG
                     IYSGGKGYYFESNDTLKDMNKAFNLDIYTKDFDKFYRELNLYQLAERLGISK"
BASE COUNT         4612 a         2526 c         1664 g         5309 t
ORIGIN      
        1 tgctttaaat atttaattgt tttattaatt ttaataattt cagatgatgg aactttaagc
       61 gctcctaata ccataaccct tgaacacaaa gttggattat ctttgtaaaa taaatgattg
      121 ctttcatcgc aaaaaatttt aaattctttc atattattca ttcacttatt ctttccaaaa
      181 actcaaattt tctgcttttg caaattcaat aaaagcttca gctatgccat ctttttgcaa
      241 gtctttatat ttttctacat ttaatctata ttcttgtatt cttttgtcaa actcttcttg
      301 gctttcatct ttttgtttta taggctcatc tccttctaaa tgcggatgaa ataaatcatg
      361 ttttactact aaatgatcat gagaatctaa aagtgggtaa taaatctttt cgcctgaatt
      421 atctttacta ggctcattca tagtagcaaa gaagatatta tagtcctcac actttggaca
      481 taatttatca tcccattttt gtaaaaataa aacacttgtt tttgtccccg tgtgtggctt
      541 aaagacattt ccatgaagtc ctacaaccgc taagattcta gctttttgtg cgataaattc
      601 tcttatatat ttatcgcttg aattattaaa acgcccttgt ggcaatacaa tagccattct
      661 accaccaggc tttaacatat ctaaatttcg ttcaataaat aaaatatctc ttcctacctt
      721 actttgaggt ttgccatttt cttttttgcc tagctcatat ctagctaaaa ttctactctc
      781 ttttatatct cctgcaaaag gcggatttgc cattaaaaca tcaaaattaa aatctctatt
      841 ttgattttta gttactctta aattttttaa gcgtttaaaa ccttcaaaat acacatcttg
      901 ccaatcttca tcatctttta cccactcatc ccatctatca aagtcaatgg aatttaaata
      961 caaaacattt gtatgcccat cacctgcaat tagattaagc atttttgata cgcgcacact
     1021 cttttcatca aaatctatac caaacacttt ttcttttaca taatcttgac actcagaaat
     1081 cttttcttgg gctgtaaaga gatgacttgc ttctatgcct ctttctttat aaattgaacg
     1141 ccacacataa aaacaagtat gtatcggaaa tccacaactt ccacttgcag tatctatcat
     1201 actttcatct tttttgggat ttagcatttt tacacacata tctattacat aacgcggagt
     1261 aaaatattgc cctttttcac cttttgagga tttattcact agatattcaa aagcatcatc
     1321 aatcacttct aaatttgagt taaataactt tacattttgc aatgatgata cacatacact
     1381 taggtgcgaa ggagaaagtt taattttctc atcattatta aatacacctt cccatttttt
     1441 ctttgcttta tcaaagagtt tttctatttt ttgcttaagt tcagaatcag actctccata
     1501 atttctaaac tctaagctct ttgttctatc tcttgcaccc tctagctcat caaaaagttt
     1561 tataaatata agcttaaaac attcttcaaa tacatcaact ccagcatttg ccaacacctc
     1621 atcttccatt tctgtaacta aattctttaa acttcgcttt tgacttttta aaatatcttc
     1681 tttaatcaaa tcatcaaagg taaattttac tttcaacaga tccggtaatg tctggtttga
     1741 tgcaggaata tttggaatag attcaaaata atttggatct tttctatgat aatagctaat
     1801 ttctttacca ttacaccaca cagccatagt tgcacctgta gcattacaat aactttttaa
     1861 ttgttctttg ccatctttca actttggctt ttttacttct ataatgatgt atgggactgt
     1921 gatttggatt ttatccatta tcacaatatc agcccttttt acttcgcgtc caaaatgcac
     1981 accaaattca atttttatca tatctttagg atagttatat tcatttaaaa gcttatcgat
     2041 ataaagctgg cgcacaattt cttctggcgt aagtttaatt tctttatcgc ggataaggca
     2101 attagtatag tatataattt ggttattttt gtttgtttta gctataattt tagtttccaa
     2161 ttcagcaata gcttttttac taaatagatc tagcttataa tcactatctt ttaaaatttc
     2221 ctcaatcatt ctaaaccttt aaaaattttc tatcaagtct ttaaaaacaa gacaaagttt
     2281 ttcaaattct tctatactta ccctttcatc aatagcgtga attctatcat tacaaacccc
     2341 aaattctact acctttacac cgtattttgc aaaatacctt gcatcacttg taccgccttt
     2401 ggtattaagc tctggcactt catgagtgat tttttgaacg ctttcattca ttttttgaac
     2461 gattttatta tcgatatttg tcaaaaaagc ttcgcttgat tgttttagct ctaactcata
     2521 gtttaaacca tgacaaattt tttctacata actttttaca tcttctaagc ttgtatcagg
     2581 ggaattgcgt acattaaaca taagttttaa atcatttggc gttacattac atacccccat
     2641 acctccacga atatcagtta taacgatttt tgaaggacta aattcagcac tacctggatc
     2701 aagatcaaaa cccgctaaaa gctttaaaac cggtgcaaaa tcatgcacag gattgataca
     2761 tttttcagga taagcaacat gcccttgttt tccacggatt aaaagttttc cattgataga
     2821 accacgacgc cctattttga tactatcgcc catttttttt acgcaagtag gttcagcaac
     2881 cacagcataa tcaggtagca tatttttttc tttcatccat tctaaaacag cttttgttcc
     2941 gtattttgcc tcgccttctt catcgcttgt taaaataagg cttaatctcc gccctttaaa
     3001 gctaacatcc tttacagcat cgataaaagc agctacgcca cttttcatat cctgtgcacc
     3061 ccttgcatag ataaagcctt cttcctccaa aggctcaaaa ggatcatttt tccaaccctc
     3121 acccgcagga acgacatcta catgcccacc aaaagctaaa tgctcaccct catcattaaa
     3181 tttcttagta agcaagagat ttttaatccc ctctttttct ataaaaaaag cttcaaaatc
     3241 actcagttcc atagcgatga aatttaaagc tccatcatca tttggcgtaa cagatttaaa
     3301 ttttaaaagt tcgattaaaa attcttttgc attcattttt ttatcctata aaagttttgt
     3361 ataataaact cagagcgaaa tactctataa tcaaagctga aactatattg ataatacgaa
     3421 tcacctttgc actaaaaaga tagctgtatt ttgcgacaac aaaagctaaa gcacctatcc
     3481 aaaaaagaat agcaacaaca agccccagta tcgtagaata agtgtgttga ttgcttaaaa
     3541 ctatgcctgt agcactaagc caaaaaccta tcacataagg attagagcca tttaaaatga
     3601 tacctttaat ataacttttc aaaagacttt ctttaaattc tttatgctct aaatttaagc
     3661 tttctttctt ttttcttagc atcaaatacg ccatataagt taaaaaacaa aaaccaaaaa
     3721 tcgccaaaaa acgcataaaa atgacattgt ctaagaaatt taaaagccca aattgaagca
     3781 aaaaaagata aagcatatct atactaaatg ctccaagtcc tacagctatg gaatttttaa
     3841 aagcttttag tgcataagtt aaaatcaaaa tatttacagg tccaaaaggc acactcactc
     3901 caaagcccaa aaaaactcca cttaaaaaag aatcaaacat taccatcttt cataaaattt
     3961 tctatatcaa gtgtgatttt atcaatagcg cttataatat cttctatata gattttatca
     4021 aaatatcgct ctaaattcac atctttttca taaatattta aaatactttt ttcacacatt
     4081 gaagcatact gccccacagg caaaaccgcc ccacttgtgc ctatgctaat aaataatgaa
     4141 gtttgatgaa gtaaagaata aagcgtagca taagcaggag cttgctcttc aaacatgact
     4201 atattgtgtc ttaaatcctt acttttgcat tttgggcatt gtttatctgt gaatttttca
     4261 tagcctatat taaaaattcc ttcacatttt aggcaacgaa gttcgggcaa aaagccatgc
     4321 aaatgaatca catctttaca ccctgcacgc tctagcaaat catctacatt ttgcgtgatg
     4381 acaaaaaggt ttttacccca tttttctttt aattgtgcga ttttttcatg agcatgattt
     4441 ggctttacat tttgaagttg tgcccttctt gcatcgtaaa aatcaagtac ttttttagga
     4501 ttttttctaa aacctgttgc agagcaaacc tccatcacat cgtattcttc ccaaagtcca
     4561 tcattatctc taaaagtttt aagcccactt ggagcagaca aacccgctcc gcttaatatc
     4621 ataatgtttt tcatcgctaa accttataaa atttacaaag tttagcgaaa aatgctttaa
     4681 gaaaataaat atttttgcaa gattttttct ttttcttttt ctaatctatc aagttctatt
     4741 ttatattcat tgattttttt ctcaatcttg tcaattatat ctgctatttg atcttgaaat
     4801 tctaaagaag gaagtttaac tcttaatgct tttattctat ctattgaagc tctaagtttt
     4861 cttgaaaatc cttgtttttt accagcttca tttaaaataa aacttatgta tttagcattt
     4921 atttttgtat catcaaccct taatacccca caatgatcag ttggataaaa ctttttattt
     4981 tttggtataa atcccaccat ccaatctcca tctatacccc acaaaacaga atcattatca
     5041 taatcttgca aaatttcttt attaacaaat ccaaatactt ccaacacatt tgcactataa
     5101 acaggaattt gtccattttc aagcagctca ttatttaaaa ctctttttcc aatacttagt
     5161 ttaaaaattg gatttgataa agcatattct ttaattgttt tattaaatga tgataaaaat
     5221 tcactatcca aatttatttt acacaaatta ttaattttat ctaaaataga atttagttca
     5281 tattcttgac tgtcctctat aataccacat ttttgaagca ttgctttgat taggttttga
     5341 tactctttta tactcaaact taaagtatta tactgctctt ctatcttttc acactctgct
     5401 acgatttgtt tttgaatttc aagcggtggt tttggaataa ccatattttg caagattcct
     5461 aaatttatat tttgttgcga agttgtaata acttcgttat ataattgaaa tttaaaataa
     5521 tcaatagcat acataagata tttatttata aattcttcat ttggaataat agctactata
     5581 gcttgatttg ttgtcatatc ttcgcctaat attccaactc taccaatagt tgcataaatt
     5641 gaaacaacaa cagcaccttt ttgtatcatt tttgcattag aattcttaaa accctctctt
     5701 gtaatttttt ctttagtatc cataataact tgatggttag agtaatcgct aattgttagc
     5761 cacttaatat ccccattcca ataatttata ttttttcttg atggtgttcc tcccatgaaa
     5821 aaatctccac aaattttcaa tttaaccaat gggtattgag actttatttc ttctctttga
     5881 gtttttggat ttaaacttat agctttatta aattccactt tttcaaaatc tatcatatca
     5941 acaagccttg cttttgtagc ataagtctgt aattcttgcg ggataacatc aagcgtattt
     6001 aaaaaagatt tgtagattaa agtattaagc ttagtctcat tttgtggatt gcctctttca
     6061 aaaagtgggc tcaaataagg ctcgtgcaat tcttttaaac cttcatcacc ttttctatta
     6121 ctccactcat aacctaaaaa tttcttttgt tcttttatat cacttggaga ttttatgatt
     6181 aaaacttctt gattaagact tagacaaaaa taaagcaatt tatccttttc tattgcttga
     6241 gtataagcta aaaaggcttt atcttctaaa tcttgcttat ctttactttc tttataaatt
     6301 ttagattctt taagtttttt ataatcactt gtttgcctaa atgcattgcg ataatcttta
     6361 aaggcttcta gctctgcaag tttagaatct aagtttccat ttaaaaaatt gctataaagc
     6421 tctttatcaa attttctaaa atcacaatac gcacttagat aattttgata aaagctttca
     6481 ttgtctttta aattttcagc ttctatgcgt tctttaatca aactataatc ttgagaaata
     6541 agatgatttt cttgtttaaa agtttctttt ttgcgtaaaa ataaaataat cgtatttgtc
     6601 cctgttgctc caaatgtttg attacctagc tctacaatgg caataaaatc aaaattttga
     6661 aataatattt ctcttgtatt tttataaata gaatctttat ttaaaataga acttggtaag
     6721 ataatagcag ctttagcatt atcatttaaa atttgatttg ctcgctcaca aaaaaagcat
     6781 tcgatagaat tatttgtttc tatgtttata tcatcgttga aaagtttata agtattttta
     6841 gatttatcac ttaaagtttc taaaaatcct tttacagaat aaggcggatt tgctataagc
     6901 aaatcaaaac tatttgattc tatttgtggt tttgcttttt ctccttctaa attatttgta
     6961 tttgctaatt caaaagaagc aagtgcatca gcgtataaaa tattgatttc attttgccca
     7021 tacattgcac ttgatacctt agaaacctta cttaagcgat actctttttc aataccataa
     7081 atatttttat aatgctcttt aagctcatct tctgttagat aacgcttaag ctcattggca
     7141 taggtgttta aaaaatgtcc agcaccacaa gcataatcaa tcacccttaa agctttagag
     7201 tttttgctta acatttcgtg aagcggtaaa gaatacataa taaattcaca aatttgaata
     7261 ggagtaaaaa actgaccttc atcttgcttc ataccttttt gcaaaaaaag ttcaaaaaga
     7321 ttgcctaaaa attgatttgt agagttttgg gtaagcttgt aatttgcaaa aagctctact
     7381 atttctttta atacaagtgc attttttaag aataattctt tattatgcac ttctaaaaat
     7441 gcaaaatcat tatttgaata aaattttaat tctttgatgt aattttgcat tacttctttt
     7501 aaagttttta tctttaattg cttaaagtct ttttctatat cttcattaga tacaaaggta
     7561 attttctctc ctaagaattc tttcatagct tctttataaa gccacattaa tctatcttgc
     7621 atatttgcat aagtatctgc cattacacca aaatatccaa atttgagatt atttttatta
     7681 aaagtttcat cataaatttt gcaaagaaaa atatttacaa gtttatcaaa ggcattttcc
     7741 ttgcctgata tattatgctt gcgtaaaatt tttgcaaatt cgtgatattt accttcttct
     7801 ttaagttcct taagattatc aaaagttgga gtaatttcta aaattttata agcattgaca
     7861 ttttcttcaa aaataccttg tttaaaatat tgcagttcat aactttcttt ccaagtttta
     7921 aaaagttcta tattgttatt agatttttta taagaatttt gtatttcctt ttcttttaga
     7981 tattcttcgt tatcgtaagc ttgtatgatg taatttttat attctaactt atcgctaaaa
     8041 tcacttgtat aaagacaaag atattttaca cctttttctt gctgaaaata agaaaaaagc
     8101 tgcccgccat cttcttgcat tctattccat tcttttataa attcactatt tttagaatct
     8161 gtggttttac attctataat caaataagga ttgttttcat tatcctttac taaaatatca
     8221 gccttaccac cttttttatc cctgccaaga ttccattttg gctctaactc taaatattca
     8281 gccttgtaac ctttttctaa aagtctatgc acacattcaa aaactacaaa attttcaggg
     8341 tgtgaaaaat tagaagtagt tttatcgtga atttttattt cttttgggta attaatactt
     8401 tggtttttat aatctattaa aagagtgtaa ttattgattg tttttacata attttcattt
     8461 ttatttttaa agcctaagtt ttctagaact tgttttaaat tatcttttgt aatcatttat
     8521 ttccttataa tctcaccacc ttagcaccaa agccaccttg attgatcggt gcgtcattaa
     8581 agcccttgac acttttatga gttttcaaaa actctcttac agcaaaggca agctttcctg
     8641 ttcctatacc atggtaaact aaaacttcat caaagcctgc aagcaaagca tctgaaataa
     8701 atttatcaag ccttgaaata gcttcatcac tcctaagccc atgcaaatcc aagctaacgc
     8761 taagattagt cggttttgcc acactaatgc ttgtttttgg acttatttta ggtgtaggag
     8821 tgcttttttt aagcagtttt aaaggcacac gaagtttgat cccatcactt tcaaccatag
     8881 catcgttttt agaaatgctt atgattttac ccttaatttt ttcatatttt acaaaatccc
     8941 ccacacgcaa ttcttcgttt tgctccatac ttggcaagat gatttctttt ttaagttcat
     9001 tggctttatt aagacttctt tgcttgtctt ttatatcttt aagctgtatg gttttcttag
     9061 cttcttctat ggctttgtga aatttaaatt ctaaatttct caaactcgta cgaaattctt
     9121 gttcattttt ttctttttgc tcttttaagg aaagtaaaat ttcatcgact ttttgctctt
     9181 ttttctcaac attttcaagc ttagctttta gttctaattc aagattgata tttttaccca
     9241 caagctcttc taaattttct ttatcctcgc cataaagctt tttagcctcg ctaactaaat
     9301 tcggcggaat ctgataacgc aaagcggttt caaaggcata agattttcct atagtacctt
     9361 ttaaaaactc atattttggg cgtgaaagct cttcatcata taaagcagca atgagttcaa
     9421 cttgctcatt ctttgctaaa agcatagcaa ggcgtttgtg gtgcgtggtg atgatgattt
     9481 taagattatt agctatgagt tttgaaatta acacactata caaacaagcc gcttcttcaa
     9541 aatctgttcc aagctctatt tcatcgatac ctaaaagcaa atttttctta gaaaaaagtc
     9601 tagaaaaatg caacattctt cctgcaaaag ttgaaatgtc gtttttaaca ttttgcggat
     9661 cttctatgat ggcatcaaat tctttaaaag taccaatttt actttcactt gctttgatat
     9721 gcataggcaa aagatgttta gctaaaaatg ctgcacttag catggatttt aaaagcatgg
     9781 attttccgcc tgcatttacc cctgtgatga ttaaaacttg ttttttaaat tccaaactca
     9841 cgctttttgg attttttaag gcaggatgag cgaaattttt aagcactaaa tccgtacttt
     9901 gatcacacaa aacaaattca aaatcccttt ttttagcaag caaaacccta gcactataat
     9961 gatcaaaaag atcaaaggct gtattgataa attttaaaaa aggtagattt tttgctaaaa
    10021 aagctgagaa atttttagcg tattcataat aaatttcttc tttttgattt ttgatttttt
    10081 ctatatcatt ttgcaaattt tcaacactta aaggcacgat ataaaagcca ccgccattac
    10141 ttctgcctat gatttttgct ttaatagcgt gattaaaccc gcctcttaca agcaaggctt
    10201 caagattgtt tataagatgg atttgtgtat cgataagata aggcattaaa gcttttgtat
    10261 agcaaaattt cttaaactca gctattatgc tttcattttt taatcttaga gcggcattaa
    10321 gatttacaag tctttcatct aaactttctt ttaactcccc tttttcatcg aaattcaaac
    10381 aaagctccaa agccccgcta acaaattcta tcttttgtag ccaagagtct aaatttgttc
    10441 ctagttttat tttttttaac ttttcaaaat aacgaaaaat ttttacaaat tcaaaaattt
    10501 catctaaatg taaaattcct tgcttgctta aatgaactaa ggctttatca agattgctaa
    10561 gctctggtat agtaggaaat tccacctcgc aaagctcatg tatacgttta aaatggagat
    10621 tagaatctcc ttgcaaaaaa atctccttat ctcttgcaaa aagggcttta aactcttcta
    10681 aatagctgtt taaatcaagc tttgagatca attcttcttt tgtatcattc atcatttaac
    10741 ctacaatctt taatatctat gattaaagaa ttaaaacttt gattattatc ctttgaaata
    10801 aaacttcctg tcccaaattc gtaattaaaa tacgccttag aaacattgat atctttacat
    10861 aaaatatttt tattttgatt aaaagctacg ataatatctg ttcttaaatg acttttttgt
    10921 gtgttttcaa attcaaaaaa tactgctaaa acaataaaaa tcacaagtaa aataccaaaa
    10981 aaaggtttag tttttttgcc taatttttca cgcaaagcaa aagtgattaa ggctaaaatt
    11041 aagatgatta aaagatataa aaaaaaccta ctcattcttt tgccttaatt tgttgctgat
    11101 atctcctgcg ccaaaaccta taataagccc ttcttcaaaa acttgcccct tagaagccac
    11161 caaaaattta ccctctcttt tgatatcttc tacaaataaa gccttaggaa aaaccgcttt
    11221 taaatcaagt tctataggct tttctcctgc agcataaaca ggtaaaatta taagctcgtc
    11281 tacaccttca aaagcctttg caaattcctt taaatttgca gccaaacgcg tgtagcggtg
    11341 gggttcaaag atagctgtga ttttcttata tccgcctaat tttgcgtatt cttgtgctgc
    11401 acttaaagtc gcttttattt cggtgggatg atgaccataa tcatcgatta aaaccaaatt
    11461 ttcatcagca tgtaaaatat caaaacgctt tttaatacct tgataatttt taagcctagt
    11521 tcttatcgtt tctatatcta agaaatttaa agccgccaaa atcgccaaag acgcatcaag
    11581 ggctaaatga tatcccatac caaaaacttt aaactcacct aaatctttta actcaaagct
    11641 tgtaaaaggt ttgaaatttt ctatacacat ggtgcagttt ttgatatctt tacttggata
    11701 aagcttgatt gactcatttt tataattttt caaaaactca tcttcagcat taatcacgcg
    11761 aattttagcc gtatctaaaa actgcgtata agcataatgg agttttgaaa cttcattacc
    11821 ataatgatct aaatgctctg cttctgcatt agtaactata gccaaataag gatttgaatt
    11881 taaaaaagaa ctatcgctct catcagcttc aaaaacaagg ttttgacttt ccttataaat
    11941 catatttgaa ccaaattctt ttaaaatcgc tccgatgatc acagaagcat catcaagtaa
    12001 agaagctaaa atacttgaag tcgtgctttt tccatgtgct cctgcaactg caaaaacacg
    12061 cttatcttct aaaataagag gtaaggcttc cttgcgtgaa agacacttaa tacctaattc
    12121 tttagcgtgt ttaaattcag gattttcttc tttgatagca gcagaataaa taactaaatc
    12181 tttgtttaaa atattgtctt tatgatgagg gatactgacc ttaacccctt ctttttctag
    12241 ttctttagtg attttactct ctttaagatc acttccgcta attttaaaac ctttttcttt
    12301 taaaaatctt gctaaagcgg aaattcctat accgcctatg ccgataaaat ggatattttg
    12361 catcatttaa acctttatac tttaaaggct aaattttagc acttttttac taaaaagaaa
    12421 atataaatcc tattttgaaa tgcctaaacg ctcggctaat tgatataaat ttaactctct
    12481 ataaaattta tcaaagtctt tagtataaat atcaagatta aaagctttat tcatatcttt
    12541 taaagtatca ttactttcaa aatagtaccc tttaccgcca ctataaatac cttttttatc
    12601 aatccataca gcatcgttga tcccaaattc taatttctca tcacttgatc ttgctaacat
    12661 atttcttccg cctacgctta aatacttgac attatttaaa cttaaagcat aaagagttgg
    12721 aaaaatatct ttatgagatc ctacacgatc tttatcataa taaatattat cttgcaaatc
    12781 cttaggaata taaagataaa aaggtacact ataagcaaaa gctttttggg aatttaaatc
    12841 catactcatt tcgcgtactc tatgatctcc agttgctgct ataataacac tattcttaaa
    12901 tggactttgt tttactttat ctagaaattt tccaaattca ttatttgcat aagtataagc
    12961 tttgataata ttatcttgtt tatctttttc ataaggaagc atattaagca aagtttgtgg
    13021 aatgttttct aattttggca aatcattttg tggaatttta taaggtggat gattggatat
    13081 ggtaagagca attataaggg tgttgtgtgg atttttttga agcaagtcat aaactttttt
    13141 atataaaaac tcatcagcta ctccataacc attttcacta tcttttgctc cattatactc
    13201 tttcattaaa atattttcat ctataatctc atctactccc aaaataccga gataattttt
    13261 aatattttgc caagatccat tacctgcact tacaaaaatc accttatatc ctgctttctt
    13321 ataaatagca ataggtgtta aatccaaata agttttctga aatttgcttg tagaaatatt
    13381 agaaaatgga cttacaaaaa ataagtttgc aaaacttggt atagttccat tactagaact
    13441 caaaaaacgt ttgaataaaa aatcttgctt aaaatgttta tctaacgaac ccaaaaaatt
    13501 atgttctgta tttgcaaaat cagccaaatt aagcccaaaa ctttccatta agttaacaaa
    13561 tacactagga tgattctttt cagcttttag atttatagga ctttgatgca aataatcaaa
    13621 aagtttttct ttaagttctt gtgcttttaa agatgtgata gccttcaaag ctgcttcttc
    13681 tttatattgt tttaaagccc aagaaaatgc cataattgga tttaacattg tatcatttac
    13741 aacactatat tcgctaaaag aataattttg cacatttata gccacatgct taaatggacc
    13801 ccttaaggct acaacataaa caataattaa tattaaattt aaagctatca agggaaataa
    13861 tcttaaatta acaggtttta gctttaaatt taatattttc aaatttaaaa aaactacaaa
    13921 aactccaaaa atcaacatta aagctaaaat ttttaaaatt ggataatcat gataaataat
    13981 acttaaaata gtttttgcgt tatcatcttt tagagtaaac ataaaaatat caaatttagt
    14041 cttgtaaatt tcgtaataat agtattttgc ataagaaaat cctatacaaa gacaagaaat
    14101 aacaattata t
//
LOCUS       DAPWGO010000038        13694 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.039, whole genome shotgun sequence.
ACCESSION   DAPWGO010000038 DAPWGO010000000
VERSION     DAPWGO010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13694
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.039"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            47..1297
                     /locus_tag="RJ336_001003"
     CDS             47..1297
                     /locus_tag="RJ336_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HDZ5213460.1"
                     /translation="MNTPKWTSHDTRWVLSLFGTAIGAGVLLLPISAGLGGLIPLLVI
                     LVLAFPMTYLAHRNLCRFVLSSSNPKDDITFVAESYFGKGGGFLITLLYFFAILPILL
                     VYSANLTTTLLEFLINQFNFNADLTHAARWWVSFLIVGVLVLISILGENVVTKAMSFL
                     VFPFIIFLFIFSLLLIPQWNSSLFTNVDFSVISTSNFWVTLWLVIPVMVFSFNHSPII
                     SSLACYCKKEYGDYAEPRARKIISLAIILMVFVVMFFVFSCALTFTPEDFASAKDQNI
                     NILTFIANKFPEVSLLAYVGPIVALVAISKSFLGHYLGSQEGLNGILYKASNGKIQGK
                     FAQTLTAIITFAIAWLVAYKNPSVIGIIEAIGGPVLAILLFLMPLYCIYRFDILARFR
                     NKFLDLFILVMGIVAISAAIHDLL"
     gene            1312..2676
                     /locus_tag="RJ336_001004"
     CDS             1312..2676
                     /locus_tag="RJ336_001004"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDZ5213461.1"
                     /translation="MSNLSIFKIGVGPSSSHTLGPMLAGNLFCKKVAKKLDEIDRVEV
                     TLYGSLSLTGKGHLSDKAVIWGLNGLEAKNLSAAIQDEVNKNAIENAQIDFCGEKKLC
                     FNYEKDLIFSKDFLPLHENGMKIKAYDCKGGLVDEETYYSVGGGFVLTAAQLEKKGKN
                     SNQNKKKKLDIELNNAKEALELCDKRDWDLAELSYRYELQFHTKEEIRAYCLEIWEVM
                     QEVYYNGTHPNEDYLPGKLHLKRRAKGLKERVAMTADPMGIIDFISLYAIAIAEENAS
                     GAKVVTAPTNGACAVIPAVMLYLKNHTIGFSDEKAIEFLLTAMLIGSFYKKNASISGA
                     EAGCQAEIGSASSMAAAAMATVLGANAFKACNAAEMAMEHHLGLTCDPVAGLVQIPCI
                     ERNAFGAIKAISAARMAMTRKSTPMVSLDEVIETMYETGKDMNYKYKETSLGGLATNL
                     KTVC"
     gene            complement(2684..3205)
                     /locus_tag="RJ336_001005"
     CDS             complement(2684..3205)
                     /locus_tag="RJ336_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213462.1"
                     /translation="MAFMNFSGFFYARNDLRLFKIEKKNELKSFFYKDYTLSSYKDAL
                     NLNNEIFFYQSLKEGLFKENDEILVSNLGKKIILFRNFTQNCDNFNEAKLKQILLLFF
                     LLLASVFFASLAMINEFGAIDLVFLMICLLLLVMGVINLGLLFKQIRILKSFSKEEMK
                     EFLSQRMKKYTKV"
     gene            complement(3186..4196)
                     /gene="ribD"
                     /locus_tag="RJ336_001006"
     CDS             complement(3186..4196)
                     /gene="ribD"
                     /locus_tag="RJ336_001006"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDZ5213463.1"
                     /translation="MSNFKIQGRQMKEFYMNLALNEAWKYQFLTYPNPAVGCVILDKN
                     GKILAIKAHEKAGLAHAELNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSI
                     AFVTLEPCSHQGKTPPCAKLFSELGFKKIFISVKDENKIASGGAEFLKKQGIEIEFDI
                     LKEEGKKLLKPFLKWQKEQFKLFKLALSMNGSPFGKIVSNELSRTYAHKIRAVIDLLV
                     VGGETIRKDHPILDARLCKAKAPNLCILSRQNIDNFDKNIPLFKVPNRQIYTQIPSEA
                     KFLMYEGGENFLKTFKDEIDMFLIFQSSSLNDEKNVTIPLNFKPLYRNFLGSDTYGIY
                     EL"
     gene            complement(4401..4488)
                     /locus_tag="RJ336_001007"
     tRNA            complement(4401..4488)
                     /locus_tag="RJ336_001007"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4452..4454),aa:Ser,seq:tga)
     gene            complement(4510..4583)
                     /locus_tag="RJ336_001008"
     tRNA            complement(4510..4583)
                     /locus_tag="RJ336_001008"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4549..4551),aa:Cys,seq:gca)
     gene            complement(4602..4690)
                     /locus_tag="RJ336_001009"
     tRNA            complement(4602..4690)
                     /locus_tag="RJ336_001009"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4654..4656),aa:Leu,seq:taa)
     gene            complement(4700..4774)
                     /locus_tag="RJ336_001010"
     tRNA            complement(4700..4774)
                     /locus_tag="RJ336_001010"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4740..4742),aa:Gly,seq:gcc)
     gene            complement(4846..5598)
                     /locus_tag="RJ336_001011"
     CDS             complement(4846..5598)
                     /locus_tag="RJ336_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213464.1"
                     /translation="MLAFFKGLGIGFLCLLLFVAGVVFNVEFLGKKDSNHDLYFSRNI
                     EVSNTLKPDILYANINFWANENLSSKITLDNSEKAEIANTFNQILERSKKENFCSGGS
                     FSLEPNFSYKDGIQTPKGQRFDAILECEFKENQLADFNKLLNDINSIIAKNNFISVST
                     PAIQTKFSKDTLNNNKENLYKELLKTSYEYEKTYSLDLNKTCVLKNLQVNTNVNIAPR
                     MLNAKSDNIELSSPIISEKEQILSAKALFICK"
     gene            5671..6690
                     /gene="mutY"
                     /locus_tag="RJ336_001012"
     CDS             5671..6690
                     /gene="mutY"
                     /locus_tag="RJ336_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDZ5213465.1"
                     /translation="MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDR
                     AYGVYISEIMLQQTQVKSVLERFYFPFLKKFPTLESLANANEDELLKAWQGLGYYTRA
                     RNLKKAALECVDKFGAKLPKEVEELKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRV
                     LSRLFALENPSMKELEKRAKELLNINHAFDHNQALLDIGALVCVSKNAKCGICPLYDF
                     CQGKFHTELYPRAKKILYESVNLNLFLFEFNKKFAIGQSQDKFYKGMYNFPFFKEGEY
                     KLSKDMSFIGEFKHSYTKYKLNIKVYHQILNNENKNYEFKTLKELESTALSALSLKAL
                     KLIKL"
     gene            complement(6676..7933)
                     /locus_tag="RJ336_001013"
                     /pseudo
     CDS             complement(6676..7933)
                     /locus_tag="RJ336_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344988.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            8098..8955
                     /locus_tag="RJ336_001014"
     CDS             8098..8955
                     /locus_tag="RJ336_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/SPASM domain-containing protein"
                     /protein_id="HDZ5213466.1"
                     /translation="MKFKKIYIELSDICGLKCDFCPSQKGIRGVMSEEKFQNLAHKIS
                     NKAELFTFHLLGDPLLLPNFENYLKIAKGEAMKLEITTSGFYLNSKNQALLLGYENIH
                     QINISLMSFLSQSKISLEQYFKPILELCKKHLEQKSLSFINLRLWNLDANFKAPKSNL
                     KIYEFLAKEFEVKIDTNLSKNRLQRHILLHQNKLFKWPNLKDEPLYKKGKCHALKEQI
                     GILSDGSLVPCCLDAKADINLGNVFENNFDKLFKSPRIKMMKKAFEEDKRIEKLCQTC
                     EFFKARLGD"
     gene            complement(8952..9758)
                     /locus_tag="RJ336_001015"
     CDS             complement(8952..9758)
                     /locus_tag="RJ336_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDZ5213467.1"
                     /translation="MKKILIIMSLFLITLNAKERLVVLDPASIETLFMLKAEDQIVGI
                     ATLQHSNIYPKDQTSKLTSVGTFSNPSLEKIVALKPSLVILSSYSLNLEEGLKNFGIK
                     SINLKAERLEDITKNITTLGQITKKEKEAEFLKQEFTQNLKKLSDKPLNKSAIYLYSS
                     NPLMAFNDNSLIADILRLIGIKNLSPQSQISRPVISAEYILKQNPDILILGINAKNNL
                     LDTNALLKNTKAVKTGSIYFNKDTHILLRLSPKIIDRIQEFKTKLENNNF"
     gene            complement(9755..10531)
                     /locus_tag="RJ336_001016"
     CDS             complement(9755..10531)
                     /locus_tag="RJ336_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213468.1"
                     /translation="MLKIQDLSFAYHQKDLLKNIHLELKNQAFIGILGPNGSGKSTLL
                     KLILKNLSPNKGEISLFNTNIKDFSLKEFAKICGFVPQKSELNTPLKVIDVLLMSKYA
                     NLKHAFSSYSKEDILEIKEFAKDLRLENFLERSILSLSGGEFQRMLLARALLKKPKIL
                     FLDEPTSALDLNYAIELLSLCEKLVKEKNIAVVAILHDLNLASMFCDKILFLKEGEIK
                     YFGTSKELFTQEILKEIYDLNCEIIYKNSKPYILALKEKK"
     gene            complement(10531..11517)
                     /locus_tag="RJ336_001017"
     CDS             complement(10531..11517)
                     /locus_tag="RJ336_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDZ5213469.1"
                     /translation="MLNLNTHSKILVIIGLLVAYIIASFTALCLGDENLNPKELFSYI
                     FSQDEILRQIIIDGRLPRIIMAILIGMLLASSGAITQNVFSNPIADPYIIGIASAATF
                     GAVLAYLLKLNDYYYGILGFVCSAFFALGVFKISSKASIATLLIIGIAASSFLGAFTS
                     FFTYLIGEDSFKIVAWLMGNIGNASWFRVGILILPLIFCLFYFYAHKNELNILLSGDD
                     EARNLGVNAQKLKINLLIVSSLAVSFAVAFSGLIGFVGLIIPHTIRLLLKNYDNALVI
                     PLCTAFGGLFLLICDTLARTLLAPVQIPIGILTAFFGAPIFLYLALSARRFL"
     gene            complement(11492..13609)
                     /locus_tag="RJ336_001018"
     CDS             complement(11492..13609)
                     /locus_tag="RJ336_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDZ5213470.1"
                     /translation="MHPNKKAFKLSLFALLLITNLNAQESNEAINLQKVVVSATGFEQ
                     DADSNLRNVISIEGKDLQNKGYVSLEQALERISGISFVNFGLGRNIDMRGQGDKSNIA
                     VKVMIDGRAINVLDNSHGVTPLDSINLDNVERIEIIPGGGSVLYGSGTRGGVINIITK
                     KQKSDAFAINLKSSAYDHGGLGGNLGINGAKQINENLAFSFDIQSFNLDGYQEGYNEK
                     GYFINTKTYIDINDNSDLTLGYDYFKSKNTSSGYLTKAQAQSDPTQKGNSDNITQINR
                     PEISLDYHYYFDDIWEFNLEAFWQNQKIDYLKDEISMMGTTAYQNGSGFEDTLTGISL
                     KNKLNYANNSYFIFGYEFTNHDAKRKSLVYYSVPGVINYHRMTTLMDMTKQSHSIFAL
                     NSHNFNEFFTLSGGARYEFSTYDTDRSYRNEMSMNIPRPPSDSTTLFDTNKNTNNFAF
                     EITPNFKYSDTGNLYLKYERGFVSPAPAQFVNRNKTGNGIPPYYSSNLKAEIFDTFEL
                     GIDDFWWDFYGFNLTLFYTLSKDEISYLGNPHSTSGSWWKYYNIDQTRRLGVELSLSQ
                     NFLDDDLIFRESLTYLDAKISKGVNDGMRIPYVSKIKATAGLEYAWNKNFSNFIDLTY
                     FSRAKDGGTIDENTGKMSKNSWIRDYFLTDIGMKYNYKKLQILAGIRNLFDKRYYTYQ
                     DSINDQYLVGNGRNYYVEFKYAF"
BASE COUNT         4621 a         2052 c         2183 g         4838 t
ORIGIN      
        1 ttttgctaaa ataaaaaaga tgtaatctta aatttaagga agaataatga atactcctaa
       61 atggactagt cacgatacaa ggtgggtttt atctcttttt ggaacagcta ttggagctgg
      121 cgtacttttg ttacctatta gtgctgggct tggtggattg atacctttgt tagttatact
      181 tgttttagct tttcctatga cttacttagc tcatagaaat ttatgtcgct ttgtgctttc
      241 aagttctaat ccaaaagatg atattacttt tgttgcagaa agttattttg gcaaaggtgg
      301 tggattttta attacacttt tgtatttttt tgctatttta cctattttat tggtttatag
      361 tgctaatctt acaacaactt tgcttgagtt cttaatcaat cagtttaatt tcaatgcaga
      421 tcttactcat gctgctcgtt ggtgggtgag ttttttgatt gttggagttt tggttttgat
      481 ttctattctt ggtgaaaatg ttgtaacaaa agcaatgagt tttcttgttt ttccttttat
      541 tatattttta tttatttttt cattgctttt aattccacaa tggaattcat cattatttac
      601 aaatgttgat ttttccgtaa tttcaacaag taatttttgg gttactttat ggcttgttat
      661 tcctgtgatg gtatttagtt ttaatcactc tcctattatt tcttcacttg cttgttattg
      721 taaaaaagaa tatggtgatt atgctgagcc tcgcgctaga aaaattattt ctttggcaat
      781 tattcttatg gtttttgttg taatgttttt tgttttttct tgtgctttaa cctttacacc
      841 agaagatttt gcatcagcaa aagatcaaaa tatcaatatt cttactttta tagcaaataa
      901 atttcctgaa gtttctttac tagcttatgt tgggcctatt gttgcgcttg tggctattag
      961 caaaagtttc ttagggcatt atcttggttc tcaagaaggc ttaaatggta ttttatataa
     1021 agcaagtaat ggtaaaattc aaggtaaatt cgctcaaact ttaacagcga tcattacctt
     1081 tgctattgct tggcttgttg cgtataaaaa tccaagtgtt ataggaatta ttgaggctat
     1141 tggtggtcct gttttggcta ttttgctttt cttaatgcca ctttattgta tttatcgttt
     1201 tgatattttg gcaagatttc gtaataaatt tttagatctt tttattttgg taatggggat
     1261 agttgcaatt tctgctgcaa ttcatgatct tttataaatt aaggataaaa aatgagtaat
     1321 ttaagcattt ttaaaatagg tgttggtcct tcttcttctc atactttagg gcctatgctt
     1381 gctggaaatt tattttgtaa aaaagtcgct aaaaagcttg atgaaattga tagagttgag
     1441 gttactcttt atggttcttt gtcattaaca ggtaaaggac acttgagtga taaggctgta
     1501 atttgggggt taaatggcct agaagctaaa aatttaagcg cagcaataca agatgaagta
     1561 aataaaaatg ctattgaaaa tgctcaaatt gatttttgtg gtgagaaaaa actttgtttt
     1621 aattatgaaa aagatttgat attttccaaa gattttttac ctttacatga gaatggtatg
     1681 aagattaaag cttatgattg taaaggtggg ttagtcgatg aagaaactta ttattctgta
     1741 ggtggaggct ttgttttaac agctgcacaa ttagaaaaaa aaggtaaaaa ttccaaccaa
     1801 aataaaaaga aaaaactaga tatagagctt aacaatgcaa aagaagcttt agagctttgc
     1861 gataaaagag attgggattt agcagagctt tcttatcgtt atgaattgca atttcacact
     1921 aaagaggaaa ttcgtgctta ttgtcttgaa atttgggaag taatgcaaga agtgtattat
     1981 aatggtacgc atccaaatga agattatttg cccggaaaac ttcatttaaa gcgtagagcc
     2041 aaaggactta aagaaagagt ggcgatgaca gctgatccta tgggcattat agattttatt
     2101 tctttatatg ctattgcgat tgctgaagaa aatgctagcg gagcaaaagt tgtaaccgcg
     2161 ccaacaaatg gagcatgtgc tgttatccct gctgttatgc tttatcttaa aaatcatact
     2221 ataggtttta gtgatgaaaa ggctatagag tttttattaa cagcaatgct tataggttct
     2281 ttttataaga aaaatgcaag tattagcgga gcagaagcag gttgtcaagc agaaattggt
     2341 agtgctagtt cgatggcagc tgcggctatg gcaacagttt taggggctaa tgcttttaaa
     2401 gcatgcaacg ctgctgaaat ggcaatggaa catcatctag gtttaacttg cgatccagtt
     2461 gcaggacttg tgcaaattcc ttgcatagaa agaaatgcct ttggagctat taaggctata
     2521 agtgctgcta gaatggcaat gacacgcaaa tctactccta tggtaagcct tgatgaggtt
     2581 atagaaacca tgtatgaaac aggaaaagat atgaattata aatacaaaga aacttcttta
     2641 ggtggtcttg ctacaaattt aaaaacagta tgctaaagtg tttttacact ttagtgtatt
     2701 ttttcattct ttgacttaaa aattctttca tttcttcttt ggaaaaactt ttaagaatac
     2761 gaatttgctt aaaaagcaag ccaagattga tcactcccat cactaaaagc aataagcaaa
     2821 tcattaaaaa aacaagatct atggctccaa attcattaat catagccaaa cttgcaaaaa
     2881 atacactcgc taataataaa aaaaataaaa gcaatatttg ttttaatttt gcttcattaa
     2941 aattatcgca attttgagtg aaatttctaa aaagtatgat ctttttaccc aaatttgaaa
     3001 ctaaaatttc atcattttct ttaaataagc cttcttttaa actttgataa aaaaagattt
     3061 cattgtttaa atttaaagca tctttgtagc ttgataaggt gtagtctttg taaaaaaagg
     3121 attttaattc atttttcttt tctattttaa ataatcttaa atcatttctc gcataaaaaa
     3181 atccactaaa gttcataaat gccataagta tcactcccta aaaaattcct ataaagtggc
     3241 ttgaaattta aaggtattgt aacatttttt tcatcattta aacttgaact ttggaaaatc
     3301 aaaaacatat ctatttcatc tttaaaggtt ttgagaaaat tttctccacc ctcatacatt
     3361 aaaaatttag cttcacttgg aatttgggta taaatttggc ggtttggaac tttaaataaa
     3421 gggatatttt tatcaaaatt atctatattt tgacggctta agatacaaag attaggcgct
     3481 tttgctttgc aaagcctagc atctagtata ggatgatctt ttcttatggt ttctccaccg
     3541 actacaagca aatcaatcac cgctctaatt ttatgtgcat aagtgcgact tagctcattg
     3601 cttacgattt tgccaaaagg cgagccattc atagaaaggg ctaatttaaa aagtttaaat
     3661 tgctcttttt gccattttaa aaaaggtttt aaaagttttt ttccttcttc tttaagtatg
     3721 tcaaattcaa tctctatgcc ttgttttttt aaaaattcag ccccaccact tgcgatttta
     3781 ttttcatctt taacgctgat gaaaattttt ttaaaaccta gctcgctaaa gagttttgca
     3841 caaggaggcg tttttccttg atgagagcaa ggctcaagtg tgacaaaagc tatgctatct
     3901 ttaaatacac cttgatggtt tttgcaaata aactcatgca aggcgtttgc ttctttaggc
     3961 aatgaaattt caggtcttaa gcttttaaaa gcatgagcta tggcattaag ttccgcatga
     4021 gctaatccag ctttttcatg agcttttatg gctaaaattt ttccattttt atctaagatt
     4081 acacagccta cagccggatt tggataggtt aaaaactgat atttccaagc ctcatttaag
     4141 gctaaattca tataaaattc tttcatttgc ctaccttgta ttttaaaatt tgacatattt
     4201 ttaaaatttt atatttttgt tttaagataa caaattctaa attttccatt tgtatttctt
     4261 atttttaatt atattagcca tagtttttct aagtttttta ggatataaca aaaatagtaa
     4321 gaccgaagta ttatttttca tttgtagtat cctttataat ttcaggaatg atataagctt
     4381 gataaactag aaagtcttgg tggccgggag aaagggattc gaacccctgg aggtgtgacc
     4441 ctcaacggtt ttcaagaccg ccgctttcga ccactcagcc atctcccgat aaagtaaagt
     4501 tttgcctttt ggaggcgaca tccggattcg aaccggagat caaggctttg caggcccatg
     4561 ccttaccgct tggctatgtc gccctgataa tgttgaaaaa gtggtgcccg aggccggact
     4621 tgaaccggca cggaagaaaa attccgaggg attttaagtc ccttgtgtct accaattcca
     4681 ccacccgggc gggtgattat ggagcgggaa acgagattcg aactcgcgac cccaaccttg
     4741 gcaaggttgt gctctacccc tgagctattc ccgcataaat ttctgaaaga attgaagata
     4801 aaagtatagc aaaataaact taaaaggagt ttattttgcc ttaagttatt tgcaaataaa
     4861 taaagctttc gcgcttaaaa tttgttcttt ttcgctgata attggagatg aaagttctat
     4921 attgtcagat tttgcattta acattctagg tgcgatattg acatttgtat ttacttgtaa
     4981 atttttcaat acacaagttt tattaagatc taaagagtaa gttttttcat attcgtatga
     5041 tgtttttaaa agctctttgt agagattttc tttgttgttg tttagtgtat cttttgaaaa
     5101 ttttgtttgt atggctggtg ttgaaacgct gatgaaatta tttttagcta tgatagaatt
     5161 gatgtcattt aaaagcttgt taaaatctgc aagttgattt tctttaaatt cacattctaa
     5221 aattgcatca aatctttgac cttttggagt ttgtatacca tctttatagg aaaaattagg
     5281 ctctaaagaa aaacttcctc cgctacaaaa attttctttt tttgagcgtt ctaaaatttg
     5341 attgaaagta tttgcgattt cagctttttc gctattatcc aatgtgattt ttgagcttaa
     5401 attttcattt gcccaaaaat taatatttgc atataaaata tcgggtttta gcgtattgct
     5461 tacttctata tttcttgaaa aatataaatc atgattagag tcttttttgc ctaaaaattc
     5521 tacattaaaa actactcctg caacaaaaag taataaacat aaaaaaccta tacctaaacc
     5581 tttaaaaaaa gctaacatgg atatccttaa taatttaatt tgagctaatt ttagcaaaaa
     5641 attttaaaat tttttgttat actctcattt atgcaaaaaa aagagcttga aaaactacaa
     5701 gaaaatttac ttctttggta tgaaaaaaat ggacgcaaaa ctttaccttg gcgtaattta
     5761 caaagtcaaa attgtgatga aagtttaaag catattgata gagcttatgg ggtttatatc
     5821 agcgaaatta tgcttcagca aactcaagtt aaatcagttt tagaaaggtt ttatttcccc
     5881 tttttgaaaa aatttcctac tttagaaagt ttggctaatg ctaatgaaga tgaactttta
     5941 aaggcttggc aagggcttgg ttactacact cgtgctagaa atttaaaaaa ggcggcttta
     6001 gaatgcgtgg ataagtttgg agctaaattg cccaaagaag ttgaggaact aaaaaaacta
     6061 agcggtatag gagcttatac agcaggtgct atagcttgtt ttggctatga tcaaaaggtt
     6121 tcttttgttg atggtaatat acgccgtgtg ctttctcgtc tttttgcttt ggaaaatcct
     6181 agtatgaaag aacttgaaaa aagagctaaa gagcttttaa atataaatca tgcctttgat
     6241 cataaccaag ctttgcttga tataggagca ttggtttgtg tgagtaaaaa tgcaaagtgt
     6301 ggaatttgtc ctttgtatga tttttgtcaa ggcaaatttc atacagagct ttatccaaga
     6361 gctaaaaaaa tactttatga gagtgtaaat ttaaatcttt ttttgtttga atttaataaa
     6421 aaatttgcca tagggcaaag tcaagataag ttttataagg gtatgtataa ttttcctttt
     6481 tttaaagaag gagagtataa actttctaaa gatatgagtt ttatagggga gtttaagcac
     6541 agctatacta agtataaact taatatcaag gtttatcatc aaattttaaa caatgaaaat
     6601 aaaaattatg aatttaaaac cttaaaagag ttggaaagta ccgcactttc ggcactttct
     6661 ttaaaagcgt taaaattaat taagctctga ttttttaggc aaacataaag tagctataag
     6721 catgatgatt gtaaaaatag ctatatagat aaaaaagcca ttttctatac ctgcatttta
     6781 aattgtaaag caacccaagg agcagatcct ccaaaaacag catttgaaat agcatatccc
     6841 aaacctgtcc ctaaagctct tacatgttca ggaaaaagtt ttgctttaaa aatcccagca
     6901 actgaagtat aaaaacttaa aataacaaac aataatacca ccaacataaa tgtcaaagaa
     6961 ggattatttt gtgcgttatt ggatataagt gaaaaaatag gataaattcc taccaatgcc
     7021 aaaatacaaa atacaattaa agaacgtttg tgacctattt tatctcctat atatccaaaa
     7081 agaggttgaa tgatcattag tataaataaa gcacctaaga aaagattatt aacaagcatt
     7141 ttatccatac ccgtattttc cataaaagtt ttagtataag ttgtaatagt ataaaaagct
     7201 aaagaacccc cagaagtaac cccaagcacc attaaaaaag gtttccaaga tttgcataat
     7261 gcttttaaag taccacgatc ttcatgctgg tgaagttttg tagcactttc attcatcatt
     7321 tttcttacaa aaagtgagcc taatgctaaa attccaccta ttacaaaaag tattctccaa
     7381 gcgtaatctt tcatatcatc aatgctaaaa aataaaaaca ttatgctaat gcttgcaacg
     7441 gccaaaagtt gaccacctat tagggttaca tactgaaaag atgagtaaaa accgcgtttt
     7501 ccttctgtag caagttctga aagataagta gctgctatgc catactcccc acctacacta
     7561 agaccttgaa tgagtcttgc tatcaaaagt aagataatag caagatcgcc cactgtatct
     7621 ttgcttggca aggctgctat cataaaagag cccaaagcca ttaaaaccac tgatataacc
     7681 atagatttct tacgacctac tttatcagct aaagagccaa aaagccaaga gcctatagga
     7741 cgcataaaaa atcctgctgc aaaaacccca aaggcattga tttgctggat aacaggatta
     7801 tctgaagttg aaaaagtatg agcaaaataa gttgctgtaa aagcatagat ataaaagtca
     7861 aaccactcta ctaaatttcc actacttgca gcaataatag agcgaatttt tttgtgcgag
     7921 taagctcttg cataaaccct tccttaattt tagattttat ttaagtatag tgtgattttt
     7981 gcttaatata tttaaaaata aagaagagaa ataaaaaaga taaaaatatt gataaaaatg
     8041 ttacatattt taataaattt cataaatttt ggtaaaatgt ttactctagg aaatataatg
     8101 aaatttaaaa aaatatatat agaattaagc gatatttgtg gtttaaaatg cgatttttgc
     8161 ccttctcaaa aaggaattcg cggggtaatg agtgaagaaa aatttcaaaa cttagctcat
     8221 aaaatttcta ataaagctga gctttttacc tttcatcttt tgggtgatcc tttgcttttg
     8281 cctaattttg aaaattatct aaaaatcgca aaaggtgaag ctatgaaact tgaaatcact
     8341 acaagtggct tttatttaaa ttctaaaaat caagctttat tgttagggta tgagaatatc
     8401 catcaaatca atatttcttt aatgtctttt ttaagtcaaa gcaaaatttc tttagaacag
     8461 tattttaagc ctattttaga actttgcaaa aagcatttag agcaaaaaag cctttctttt
     8521 atcaatctaa gactttggaa tttagatgct aattttaaag cacctaagtc aaatttaaaa
     8581 atttatgagt ttttagccaa agaatttgaa gttaagattg atacaaactt aagtaaaaat
     8641 cgcttgcaaa gacatatttt gcttcatcaa aataaacttt ttaaatggcc aaatttaaaa
     8701 gatgaacccc tttataaaaa aggaaaatgt catgctttaa aagagcaaat tgggatttta
     8761 agtgatggaa gtttggtgcc ttgctgtttg gatgctaaag cagatattaa cttaggaaat
     8821 gtttttgaaa ataactttga taagcttttt aaatcaccgc gtataaagat gatgaaaaaa
     8881 gcttttgaag aagataaacg catagaaaaa ctttgtcaaa cttgcgaatt ttttaaagca
     8941 agattgggtg attaaaaatt gttattttct agctttgttt taaattcttg aattctatct
     9001 attatcttag gactaagacg taataatata tgtgtatctt tgttaaaata aatacttcct
     9061 gttttaactg ctttggtatt tttcaataaa gcatttgtat ctaaaaggtt gtttttagca
     9121 ttaattccaa gaatgagtat gtctggattt tgtttcagta tatattctgc tgatataaca
     9181 ggtcttgaaa tttgactttg cgggcttaaa tttttaatcc ctataagtct taaaatatca
     9241 gctattaaag aattatcatt aaaggccatt aaagggttgc tagaataaag ataaatcgca
     9301 cttttattta ggggtttatc gcttaatttt tttaaatttt gggtaaattc ttgttttaaa
     9361 aactctgctt ctttttcttt tttggtgatt tggcctaagg ttgtgatatt ttttgttata
     9421 tcttctaaac gctcggcttt taaattgata cttttgatac caaaattttt aagtccttct
     9481 tctaaattta aagaataaga gcttaaaatc accaaacttg gttttaatgc tactattttt
     9541 tcaagtgaag gatttgaaaa agtgcctacg cttgtaagtt ttgaggtttg atctttagga
     9601 tagatatttg agtgttgtaa agtggcaatg cctacgattt gatcttcagc cttaagcata
     9661 aaaagggttt ctatgcttgc aggatcaagc actacaaggc gttcctttgc atttagtgtg
     9721 attaaaaata aactcataat aattaaaatt tttttcattt tttctccttt aaagctaaaa
     9781 tataaggttt agaattttta taaataatct cgcagtttaa atcataaatt tcttttaaaa
     9841 tttcttgagt aaaaagctct ttactcgttc caaaatactt tatctcccct tcttttaaaa
     9901 aaaggatttt atcgcagaac atagaagcta aatttaaatc atgcaagata gcaacaacgg
     9961 ctatattttt ttctttaact agtttttcgc aaaggcttaa aagctctata gcatagttta
    10021 aatcaagggc tgaagtgggt tcatctaaaa aaagaatttt tggcttttta agtaaagctc
    10081 ttgctaaaag cattctttga aattcacccc cacttaaaga aagtatgctt ctttctagaa
    10141 aattttcaag tcttaaatcc ttagcaaatt ctttaatttc taaaatatct tctttagaat
    10201 aagaactaaa agcgtgtttt aaattcgcat atttgctcat taaaagcaca tcgatgactt
    10261 ttaaaggggt gtttaattct gatttttgag gcacaaatcc gcaaattttg gcaaattctt
    10321 taagagaaaa atctttgata tttgtgttaa aaagacttat ttctccttta tttggactta
    10381 aatttttaag tataagtttt aaaagagtgc ttttacctga gccatttggc cctaaaattc
    10441 ctataaaagc ctgattttta agttctaaat gaatgttttt tagtaaatct ttttggtgat
    10501 aagcaaagct taaatcttgt atttttagca ttataaaaat ctcctagcac ttaaagccaa
    10561 gtataaaaaa ataggagctc caaaaaatgc agttaaaatt ccaatcggaa tttgtacagg
    10621 ggctaaaaga gttcttgcta aagtatcaca aataagtaaa aataatcctc caaatgctgt
    10681 acataaaggg ataactaagg cattatcata atttttaagc aaaagtctta tagtatgagg
    10741 aatgattagt ccaacaaagc ctataagtcc gctaaaagca accgcaaaag atacagccaa
    10801 ggatgagaca atgagtaaat ttatctttaa tttttgagca tttaccccta gatttctagc
    10861 ttcatcatct ccgcttaaaa gtatgtttaa ttcgttttta tgagcgtaaa aataaaacaa
    10921 acaaaaaatt aaaggcaaga ttaaaattcc cacacgaaac caagaagcat tgcctatatt
    10981 tcccataagc caagcgacta ttttaaaaga atcctcgcct ataagataag tgaaaaaaga
    11041 agtaaaagct cctaaaaaag atgaagctgc tatgccgata atgagtaaag tcgctataga
    11101 agctttagaa gaaattttaa aaactcctag ggcaaaaaag gcagagcaaa caaaacctaa
    11161 aattccataa taataatcat tcaattttaa caaatacgcc aaaaccgctc caaaggttgc
    11221 cgcagaagct atacctatga tataaggatc ggctatagga tttgaaaata cattttgagt
    11281 gatagcccca ctactagcta gaagcatacc gattaaaatc gccattataa tccgtggtaa
    11341 gcgtccatct atgatgattt gtcttaaaat ttcatcttgg ctaaagatat atgaaaaaag
    11401 ttcttttggg tttaaattct catctcctaa gcaaagtgct gtaaaagaag cgattatata
    11461 agctaccaaa agccctataa tcactaaaat tttagaatgc gtatttaaat tcaacatagt
    11521 agtttctgcc attcccaact aggtattgat catttatact gtcttgatag gtgtagtatc
    11581 ttttatcgaa aagattgcga attcctgcta aaatttgtaa ttttttataa ttatatttca
    11641 tgccaatatc tgttaaaaaa taatccctta tccaagaatt tttagacatt tttcctgtat
    11701 tttcatctat agttccacca tcttttgctc tagaaaaata ggttagatca ataaaatttg
    11761 agaaattttt attccaagcg tattcaagcc cagctgtggc tttgattttt gaaacataag
    11821 gaattctcat gccgtcatta acacctttag aaattttagc atcaagataa gttagacttt
    11881 ctctaaagat taaatcatca tctaaaaaat tttgactcag acttaattct actcctaaac
    11941 ggcgagtttg atctatatta taatatttcc accaagatcc actagtagaa tgagggtttc
    12001 caagataaga aatttcatct ttgcttaggg tgtaaaataa agttagatta aagccgtaaa
    12061 aatcccacca aaaatcatca atacctagtt caaaggtatc aaagatctca gcttttaggt
    12121 tcgacgaata atagggtggt attccattac cagttttgtt gcgattgaca aattgagcag
    12181 gtgcaggaga aacaaaacct ctttcgtatt taagataaag attgcctgtg tcagagtatt
    12241 taaagttagg ggtgatttca aaagcaaaat tattggtgtt tttattggta tcaaaaaggg
    12301 ttgttgagtc tgatgggggt cggggtatgt tcatactcat ttcatttcta taagatctat
    12361 cggtatcata agtgctaaat tcatatctag ctccaccgga taaagtaaaa aattcattaa
    12421 aattatgaga attaagagca aaaatagaat gactttgttt agtcatatcc attaaagttg
    12481 tcatcctgtg ataatttatg acacctggaa cactataata caccaaactc tttctttttg
    12541 catcatggtt tgtaaattca taaccaaaaa taaaataaga attatttgca taatttagtt
    12601 tgttttttaa acttatccct gtaagtgtgt cttcaaaacc gcttccattt tgataagctg
    12661 tagttcccat catagaaatt tcatctttta gataatcgat cttttgattt tgccaaaaag
    12721 cttctaggtt aaattcccat atatcatcaa aatagtaatg ataatccaaa gaaatttcag
    12781 ggcgattgat ttgtgtgata ttgtcactat tgcctttttg ggttggatcg ctttgagctt
    12841 gtgcttttgt tagatagcca ctgctggtat ttttgctttt aaaataatca taccccaaag
    12901 ttaaatcgct attatcattg atatcaatat aggtttttgt gttgataaaa taaccttttt
    12961 cattataacc ttcttgatat ccatcaaggt taaaactttg tatatcaaag ctaaaagcta
    13021 aattttcatt tatttgtttg gcgccattga tacctaaatt tccacctagt ccaccatgat
    13081 cataagcact gctttttaaa tttatagcaa aagcatctga tttttgtttt tttgtaatga
    13141 tattaatcac accccctcta gtaccacttc cataaagcac agatccaccc ccaggtatga
    13201 tttctatgcg ttctacatta tctaaattaa tactatctag cggggttaca ccatgggaat
    13261 tatcaagaac attaatagca cgcccatcga tcataacttt tacagctata ttggatttat
    13321 ctccttgtcc acgcatatct atattgcgtc caagtccaaa atttacaaag ctaatacccg
    13381 aaattctttc taaggcttgt tctaaggaaa cataaccttt attttgcaga tctttgcctt
    13441 ctatgctgat tacattgcgt aaatttgagt ctgcatcttg ctcaaaacct gttgcactaa
    13501 caacaacttt ttgtagattg atagcttcat ttgattcttg tgcatttaaa ttagttatta
    13561 gcaataatgc aaataaagat aatttaaaag cttttttatt tgggtgcaaa ttttactcct
    13621 taaataaaat aaataatgat aatttatatc ataataattt agaacgaaat ttatccttta
    13681 ttaacttaat ttag
//
LOCUS       DAPWGO010000039        13491 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.040, whole genome shotgun sequence.
ACCESSION   DAPWGO010000039 DAPWGO010000000
VERSION     DAPWGO010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13491
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.040"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..2093)
                     /gene="copA"
                     /locus_tag="RJ336_001019"
     CDS             complement(<1..2093)
                     /gene="copA"
                     /locus_tag="RJ336_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase CopA"
                     /protein_id="HDZ5213471.1"
                     /translation="MEELRIKIGKMTCVNCSNAIERACKKIDGVKDASVSYVNSSGVF
                     LLEDQEKRKDIIAKIKNLGFEILEDEQSLNAYKVKKHLELRKNLLLSIVLSVIIMYFE
                     MFVKSSFSQNIQMALSFFGIFYCGRDFFSHAFLGLKSKNLDMNTLVALGTLSAFVYSF
                     LVYLQIFKEEDLYFSGAMMIISFVLLGKYLESKAKFKAQDYQRILENIDTKKTKILLE
                     DESIKEISSSFVKSGDVLLVKEGESIVADGVVLLGSAELDMSFLNGEFLPVLKKEGDE
                     VQAGAVVLNGTLRIKANKKAMDSTLEQIKNLVFEAGNIKSPLANLADQISKYFVGGII
                     FFAFLVFVFWALKADLNTAFLHACAVLLISCPCALGLATPIALVVASSNAAKNFILIK
                     NPAALEKLALVKYAFFDKTGTLTKENLSIFKHNLSKDDFDKLCQIESLSSHPIAKALH
                     KDQIFDLKGEGRVIVGSGIKYKEDSDIYLAGSAKFLHENEIDTKESDIFFDTFKEYVR
                     VYFAKNKKCLGGVLLSNALKDGAKELVLNLKKQNLKTFILSGDHVKNVEKIAKELQID
                     EFYAQLKSEEKLRIIQKFKKTLFVGDGINDAAALSAATVSMSFSKANELAKKTGDFIL
                     IKDDLSAIFKCFKLAKKTRSIIKLNLFWAFIYNVLCIPIAAGFVPFITLSPHIAALAM
                     CFSSITVVLNSLRLK"
     gene            complement(2093..2287)
                     /locus_tag="RJ336_001020"
     CDS             complement(2093..2287)
                     /locus_tag="RJ336_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal transport/detoxification protein"
                     /protein_id="HDZ5213472.1"
                     /translation="MKFKVKNVNCMNCVNLIKNSLEDEFGNIEVDLEQKILSLNLEEN
                     QVSNFTKEFQDLGFEIIERL"
     gene            complement(2277..3227)
                     /gene="czcD"
                     /locus_tag="RJ336_001021"
     CDS             complement(2277..3227)
                     /gene="czcD"
                     /locus_tag="RJ336_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter CzcD"
                     /protein_id="HDZ5213473.1"
                     /translation="MYKFLSHEPLANKSCHHNHEEHSHEHHHSHADARSVDKKILKIS
                     LLMTFSMMLVQFIYSILSNSLALLSDTLHMFSDVFALALSFLAIIAVEKWQDHQKTFG
                     YFRLEVLVAFINALTIILSALFIIYEAIEKFINPKEIDAKTMIIVAILGFLVNGINAL
                     MMFKGANLENVNMKSAFLHMMSDLLGSLAVIIGGIVVYFSGIVYIDTILAIVLSILLL
                     RWAIILLKQSANVLLESSPVDIEKVRQVLLLNPSVDEVVDLHITQITNKMLVASMHLK
                     VRVCDLKEFEKLSQDLSHKLLHEFEIGHITIQPIRSENEI"
     gene            complement(3301..3564)
                     /locus_tag="RJ336_001022"
     CDS             complement(3301..3564)
                     /locus_tag="RJ336_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HDZ5213474.1"
                     /translation="MLCPVCNVDLVMSDRSGVEIDYCPKCRGVWLDRGELDKIIERSV
                     PNTANFNQASRQESRYNDSAYHQHNDYYKKKKKESWLGELFDF"
     gene            complement(3635..4129)
                     /locus_tag="RJ336_001023"
     CDS             complement(3635..4129)
                     /locus_tag="RJ336_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDZ5213475.1"
                     /translation="MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSALLAAIAHGLR
                     FTLVEYFHFQTLAIATFVASFCIGCLGIALAKIIKTPAEIIAFPALIPMIPGIYAYKA
                     ILYLISFIRSDDLKAKSEFLVQFFDYFFTTVSVTLALAIGVSVTLLIFFEQSFMMTRH
                     AKKH"
     gene            complement(4126..4902)
                     /locus_tag="RJ336_001024"
     CDS             complement(4126..4902)
                     /locus_tag="RJ336_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HDZ5213476.1"
                     /translation="MEKPDIQRLTNFLIIYTKTLLGAGTYTARVAKCVGRIAEVYGYE
                     ININFFFHHITLNVVDMDDNSIQRTYVIPNHHAHVNFKLIFDLSALSWAIYDHKYDLE
                     KAKVVFEQISQQKKHSYLLNLLFVSMANSAFCRLFGGDFGAGNLVFFATFVGLLLRYI
                     LTKAKIDLRIQYILCSFISSWFVFFGLDMGYTNTSDVALGSSILYLIPGVFFINSVID
                     ILKDHILMGLSRIISVGILICCIALGIYMTLSISDFGILR"
     gene            4969..5895
                     /locus_tag="RJ336_001025"
     CDS             4969..5895
                     /locus_tag="RJ336_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HDZ5213477.1"
                     /translation="MAKIGIVGLGYVGAASAYSIVIQGICSELYLYDIKQDLALAHAR
                     DLEDMSAIHFSYTKIFHVPNLENLASCDIIILAFRKESLKELPSRLVELKNNILELKD
                     IVLTLKNANFKGKYIVATNPNDTITYYTQVLSQLPKNHVFGSGTNLDSSRLKKLLAKD
                     LNINSKDIFACMIGEHGDSQFAALSNASVLGQNLLDFYKQKLGKDLDIQELEKAVISE
                     GYFIYERKGRTEFGIGTSCANLAKAILEDRKSLHPVSVVFDDIAFSMPAIIGKDGIEK
                     VFELKFNEKEKIKLENSKQQIKNAIQSVKDKI"
     gene            complement(5892..6494)
                     /locus_tag="RJ336_001026"
     CDS             complement(5892..6494)
                     /locus_tag="RJ336_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDZ5213478.1"
                     /translation="MQEIISFIVETASAWGYLGIIILMTLESCFIPFPSEVVMIPAGY
                     LAHKGELDITLCILSGTLGSVLGALINYYICFFWGKNFVLKWGKYFGINEAKFAKFEE
                     FFNKHGEFSTFTCRLLPGIRQYISMPAGLVKMKLVNFILFTALGSAIWVAILVFLGYY
                     IGQNEELIKTYLTQILIIIIVFVILASLIYIKIKKPFKKA"
     gene            complement(6575..6802)
                     /locus_tag="RJ336_001027"
     CDS             complement(6575..6802)
                     /locus_tag="RJ336_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213479.1"
                     /translation="MRKILFASLLPIIALADCASLMAKYEAPEPESKTMKQVERWINK
                     KVSDPADAAVLKECMIARAADNPNQVSVAGK"
     gene            complement(6813..8264)
                     /locus_tag="RJ336_001028"
     CDS             complement(6813..8264)
                     /locus_tag="RJ336_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3373 family protein"
                     /protein_id="HDZ5213480.1"
                     /translation="MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAQI
                     RKEREAQAKQNEAVKAELADLNDRADETEFQAALSKVKFGLEFSTAVSNTNYKVSGQD
                     YSANNKWMNELHLNMNADINNKTKFYGRLSMAKNWSQMGWSGSPYDLDAGRNTRSSGP
                     VLYVDRAYLDYYITPEWIATVGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVI
                     TYKPESLQDHKVAIRAAYGKTYQWDEEGKVRDWMSDQKDADANLYYAAVEGELPIEGM
                     GDNLILFNIAYLSDFALPLNNGPIALPGTGSGATTILDDDGVVNLGDLTIANLHFENY
                     KAFGTNFNYFLSLGYSHGNNNQLSPTLSAIIKRQGYGNGKFNEEDGYAVHVGGRYDFT
                     KALKVGYEFFWGSRYWYTMSRPSINDPLNIRMTRGTAHDFYVIYQLDRYQFLRLSYTN
                     IQNIWGNRGLPFGGAKKDKARADNIMLMYNVKF"
     gene            complement(8420..8902)
                     /locus_tag="RJ336_001029"
     CDS             complement(8420..8902)
                     /locus_tag="RJ336_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDZ5213481.1"
                     /translation="MIKTIDTSKVNEYKFALIETEKGTMKLKLFGDEAPQTVCNFATL
                     ANEGFYKDLNFHRVIPNFVIQGGCPHGNGVGGPGYEIICECDDQEHKHERGTLSMAHA
                     GRDTGGSQFFICHSPQAHLDGVHTVFGQIDPKDEESLEVLDSIRQGDKILDIKICDKI
                     "
     gene            complement(8912..9619)
                     /locus_tag="RJ336_001030"
     CDS             complement(8912..9619)
                     /locus_tag="RJ336_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDZ5213482.1"
                     /translation="MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMN
                     PKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDN
                     PTRTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGLEE
                     LEQNEEELVISGDYTAFGELSSAIEAKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLL
                     DKLEEDDDVQAVYTNID"
     gene            9728..10069
                     /locus_tag="RJ336_001031"
     CDS             9728..10069
                     /locus_tag="RJ336_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDZ5213483.1"
                     /translation="MNIAKKELFVAWFFLIAAIVFEVLGTSFLKMENQILGYIFMALF
                     IAFSYFFMGKAIKKIQVGIAYAVWELLGIILILLVSFIVFKESLTLTQILGIVLSIVG
                     IIMINIGEVKE"
     gene            10069..10377
                     /locus_tag="RJ336_001032"
     CDS             10069..10377
                     /locus_tag="RJ336_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDZ5213484.1"
                     /translation="MYIFIIVLSALLDIVANLLLKKSDGFKNKIWGLAAIVNAILAFF
                     LLSFSLKYVPLSIAYSTWGAIGIIGTCLGGWILYKEKLNKIGILGIIIVIIAVFLLNY
                     "
     gene            complement(10395..11987)
                     /locus_tag="RJ336_001033"
     CDS             complement(10395..11987)
                     /locus_tag="RJ336_001033"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDZ5213485.1"
                     /translation="MKSIIFNEIKKILECDFALENPKDKNLAHFATPLAFSLAKELKK
                     SPMLIASDLASKFQNHDCFESVEAVNGYLNFRISKTFLNELANQALTNPNDFAKGEKK
                     QESFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLL
                     GLSILLSVKENILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSQENIPSLADWAK
                     DKMLVLIKQNLEQAKIKIDSYVSERSYYDALNATLESLKEHKGIYEQEGKIWLASSQK
                     GDEKDRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFL
                     GFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCD
                     THLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQSLNQDGVNL
                     LFEALNLKAILNDAFEARALQKIPDYLKNLAANFHKFYNENKVVGSANENDLLKLFSL
                     VALSIKTAFSLMGIEAKNKMEH"
     gene            complement(11999..12238)
                     /locus_tag="RJ336_001034"
     CDS             complement(11999..12238)
                     /locus_tag="RJ336_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HDZ5213486.1"
                     /translation="MGGWSSPSHWLIILLIVVLLFGAKKIPELAKGLGKGIKTFKDEM
                     NNDDEVAKNTQKIEENKNTTNNTNTDASIDETKKA"
     gene            complement(12240..12857)
                     /gene="gmk"
                     /locus_tag="RJ336_001035"
     CDS             complement(12240..12857)
                     /gene="gmk"
                     /locus_tag="RJ336_001035"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDZ5213487.1"
                     /translation="MQGFILLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKPRE
                     GEKNGIHYHFISHEEFQKGIDGDHFLEWAKVHENFYGTSLKHTQDALDNGKIVVFDID
                     VQGFKIARQKMADKIVSVFITTKNKDELKKRLIKRNTDTIIQLEKRLQNASDEMKELS
                     DYDYLIINDELKQSYEALRAILIAHKFRTKGQNLGQIQNIWNEGE"
     gene            complement(12860..>13491)
                     /locus_tag="RJ336_001036"
     CDS             complement(12860..>13491)
                     /locus_tag="RJ336_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HDZ5213488.1"
                     /translation="NKELQANISDFDDLPVVEEQEKEMDFDDIPEDAEFLGQAKDNEE
                     SEENLEEFSPVVEEDVQDEMDDFISNLSTQDQIKEELAQLDELDYGIDSDNSSKVLED
                     FKDEPILDDTELGTNEEEVVVPNLNISDFDALKESDIQEALGEEIVEKNEEPIVSNAT
                     KDDNSEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNININISFKED"
BASE COUNT         4591 a         2479 c         1749 g         4672 t
ORIGIN      
        1 cttttaagtc ttaaagaatt aagcaccacg gtaatagagc taaaacacat tgcaagtgct
       61 gctatatgag gacttaaagt gataaaaggt acaaatcctg ccgcgatagg aatgcaaagc
      121 acattataaa taaaagccca aaaaagattt agcttaataa tactgcgtgt ttttttagca
      181 agtttaaaac atttaaaaat cgccgataaa tcatctttta tcaagataaa atctcctgtt
      241 ttttttgcaa gttcatttgc ttttgaaaaa ctcatactca cagttgcggc agataaagcc
      301 gccgcatcat tgatcccatc tcctacaaaa agagtttttt taaatttttg aatgattcgt
      361 agtttttctt cactcttaag ttgagcataa aattcgtcta tttgtaattc tttggctatt
      421 ttttctacat tttttacatg atcgccgctt aaaataaaag ttttaagatt ttgctttttt
      481 aaatttaaca caagctcttt ggctccatct tttaaagcat tgcttaacaa aacaccgcct
      541 aaacactttt tattcttagc aaaatacacc ctaacatatt ctttaaaagt atcaaaaaag
      601 atatcacttt cttttgtgtc aatttcattt tcgtgcaaaa acttcgcact acctgcgaga
      661 taaatatcac tatcttcttt gtattttata ccagaaccca caatcactct tccctcaccc
      721 tttaaatcaa aaatttgatc tttatgcaaa gccttagcta taggatgaga gcttaaactt
      781 tcaatttgac ataatttatc aaaatcatct ttagaaagat tgtgtttaaa aatactcaaa
      841 ttttcctttg tcaatgtacc cgttttatca aaaaaagcat acttaactaa ggctaatttt
      901 tctaaagcgg caggattttt aataagaatg aaattttttg ccgcatttga acttgccaca
      961 accaaagcta taggtgttgc aagccctaaa gcacaaggac aagagatcaa aagcacagca
     1021 caagcgtgta aaaaagctgt atttaaatct gcttttagcg cccaaaaaac aaaaactaaa
     1081 aaagcaaaaa atattatacc ccctacaaaa tatttagaaa tttgatctgc taaatttgcc
     1141 aaaggacttt tgatatttcc tgcttcaaaa actagatttt tgatttgttc taaagtacta
     1201 tccatagcct ttttgtttgc tttgatcctt aaagtaccat ttaaaactac tgctcctgct
     1261 tgaacttcgt cgccttcttt ttttaaaaca ggcaaaaact ccccatttaa aaaactcata
     1321 tcaagctctg cactccctaa aagcaccact ccatctgcga caatgctttc tccttctttt
     1381 accaaaagca catcgccact tttgacaaaa gaacttgaaa tttctttgat actttcatct
     1441 tcaagcaaaa tttttgtctt ttttgtgtct atattttcta aaattctttg ataatcttgt
     1501 gctttaaatt tagccttact ttcaagatat tttcctaaaa gcacaaaaga aataatcatc
     1561 attgcaccgc taaaatacaa atcttcttct ttaaaaattt gcaaatacac caaaaaagaa
     1621 tacacaaaag cactcaaagt ccccaaagct acaagggtgt tcatatctaa atttttactt
     1681 ttaagtccta aaaaagcatg agaaaaaaag tctctcccac aataaaatat cccaaaaaaa
     1741 ctcaaagcca tttggatatt ttgcgaaaaa gaacttttaa caaacatttc aaaatacata
     1801 ataatcacac tcaaaactat acttaagagc aaattttttc ttaattctaa gtgttttttt
     1861 accttgtatg cgtttaagct ttgttcatct tctaaaattt caaagcctaa atttttaatt
     1921 tttgcgatga tatctttgcg tttttcttga tcttcaagta aaaaaacccc actagaattc
     1981 acataagaaa cactagcatc tttaacacca tcaatttttt tacaagctct ttctatagca
     2041 ttagaacaat taacgcaagt cattttgcct atttttatac gcaattcttc cattataaac
     2101 gctctatgat ctcaaaacct aaatcttgaa attcttttgt aaaatttgat acttgatttt
     2161 cttctaaatt taaacttaaa attttttgct ccaaatccac ttctatattt ccaaattcat
     2221 cttcaagaga atttttgatc aaatttacac aattcatgca attaacattt tttactttaa
     2281 atttcatttt cgctccttat aggttgtata gtaatgtgcc cgatttcaaa ttcatgtagt
     2341 aatttatggg ataaatcctg agatagtttt tcaaattcct ttagatcgca aactcttact
     2401 tttaaatgca tggaagctac taacatttta ttggtaattt gagtaatatg caaatccacc
     2461 acctcatcca cactaggatt taaaagcaaa acttgtctta ctttttctat atccacagga
     2521 gaactttcaa gcaagacatt agcactttgt ttaagcaaga taatcgccca tcttaaaagc
     2581 aagattgata atacaatagc taaaatcgta tctatataaa caataccact aaaatacacc
     2641 acaatcccac ctataataac cgctaaagag cccaataaat cactcatcat atgcaaaaaa
     2701 gcggacttca tattgacatt ttctaaattt gcacccttaa acatcatcaa agcattaatc
     2761 ccatttacca aaaagcccaa aatagctaca attatcatgg ttttagcatc aatttctttt
     2821 ggattaataa atttttctat agcctcataa atgataaata aagccgataa aataatggtt
     2881 aaagcattga taaaagccac taaaacttca agacgaaaat acccaaaggt cttttgatga
     2941 tcttgccatt tttctacagc tataatggct aaaaaactaa gagctaaggc aaaaacatca
     3001 gaaaacatat gcaaagtatc gcttaaaagt gctaaagaat ttgaaaggat tgaataaata
     3061 aattgcacaa gcatcataga aaaagtcatt aaaagagaaa tttttaaaat ctttttatcc
     3121 acactccttg catcagcatg ggaatgatga tgttcatgag aatgttcttc gtgattatga
     3181 tgacaagatt tgttagctaa aggctcgtgt gataaaaatt tatacatctt atatcctttt
     3241 tgcttgacat tttaagatat taagctaaaa aggatataaa tatttgttat ttttataaaa
     3301 ttaaaagtca aaaagctcgc ctagccaact ttctttcttt ttctttttat agtagtcatt
     3361 gtgctgatga taagctgagt cattatatct tgactcttgt cttgaagctt ggttaaaatt
     3421 tgctgtatta gggacactgc gttctatgat tttgtcaagt tctccacgat caagccaaac
     3481 gccacgacac tttggacaat aatcaatctc aactccactc ctatcactca taaccaaatc
     3541 tacattacaa actggacata acatacaata ccttttttta aaatttttaa tttaaaatta
     3601 taaaaagaaa tattaaacaa atttgcaaca agttttaatg tttttttgca tgtctagtca
     3661 tcataaaact ttgttcaaaa aatataagca aagtaacact cactcctata gctagagcca
     3721 aagtcacaga aacagttgta aaaaaataat caaaaaattg aaccaaaaat tcagacttag
     3781 ccttcaaatc atcactgcgt ataaaagaaa taagatacaa aatcgcttta taagcgtaaa
     3841 ttccaggtat cataggaata agagcaggaa aagcgataat ttcagcaggg gttttaatga
     3901 tttttgctaa agcaattcct aaacatccta tgcaaaatga agcaacaaaa gttgcaattg
     3961 ctaaagtttg aaaatgaaaa tattccacca aagtaaaacg aagcccatgt gcaattgctg
     4021 ctaaaagagc agataaaata agggttttta aaggtgggtt gcaagcataa gcaaaaccaa
     4081 atcccgccac agcagcaaaa aacatatctc ttaaaataaa ttcaatcatc ttaaaatccc
     4141 aaaatccgaa atactaagcg tcatgtaaat tccaagcgct atacaacaaa tcaaaatccc
     4201 tacactgata atacgactaa gtcccattaa aatatgatct tttaatatat caatcacaga
     4261 atttataaaa aatacccctg gtataagata caagatacta gaacccaaag ccacatcaga
     4321 agtattggta tatcccatat ccagcccaaa aaatacaaac cacgatgaga taaaagaaca
     4381 aagaatatat tgaattctta aatcaatctt tgctttagtt aaaatatatc ttaataacaa
     4441 tcccacaaat gttgcaaaaa atactaaatt tccagcacca aaatcaccac caaaaagtct
     4501 acaaaaagcc gaatttgcca tagaaacaaa taaaagatta agcaaataag aatgcttttt
     4561 ttgttgagaa atttgctcaa aaacgacttt cgctttttca agatcgtatt tgtgatcata
     4621 tatagcccag cttaaagcac ttaaatcaaa aataagctta aaattaacat gggcatgatg
     4681 attgggtata acataagttc tttgaatgga gttatcatcc atatctacaa catttaaagt
     4741 gatatgatga aaaaagaaat tgatatttat ctcatagcca taaacctcag ctattcttcc
     4801 tacgcatttt gccaccctag ctgtataagt tccagcacct agcaaagttt tagtatatat
     4861 gattaaaaaa ttagttaatc tttgtatatc aggtttttcc atattttaat aatctttgat
     4921 tgaatttgtt ataattatag caaattttaa aataaataag gagaaaaaat ggcaaaaatc
     4981 ggtatagttg gtttaggtta tgtaggagct gctagtgctt atagcatagt tattcaagga
     5041 atttgttcag aactttactt atatgatata aaacaagatt tagctctagc tcatgcaaga
     5101 gatttggaag atatgtcagc cattcatttt tcttatacaa aaatttttca tgtgccaaat
     5161 ttagaaaatt tagcttcttg cgatattatc attttagctt ttagaaaaga aagcttaaaa
     5221 gaattaccta gtcgcttagt agaacttaaa aacaatatcc tcgaacttaa agacattgtc
     5281 ttaaccttaa aaaatgctaa ttttaaaggc aaatacattg tcgcaacaaa tccaaatgac
     5341 accataactt actacactca agtattaagc caattaccta aaaatcatgt ttttggtagt
     5401 ggaacaaatt tggatagttc aagacttaag aaattgttag ccaaagattt aaacataaat
     5461 tcaaaagata tttttgcttg tatgattggt gaacatggag attctcagtt tgcagcactt
     5521 tctaatgcaa gcgttttagg acaaaattta ttagattttt ataagcaaaa attaggcaaa
     5581 gatttagaca tacaagaact cgaaaaagcc gtgattagcg agggatattt catctatgaa
     5641 cgcaaaggaa ggacagaatt tggcatagga acttcttgtg caaatttagc caaagccatc
     5701 ctagaagata gaaaaagttt acatcctgta agtgtggttt ttgatgatat agctttttca
     5761 atgcccgcta tcataggaaa agatggtata gaaaaggttt ttgaattaaa attcaatgaa
     5821 aaagaaaaaa taaaattaga aaattcaaaa caacaaatca aaaacgccat acaaagcgta
     5881 aaagataaaa tttaagcctt tttaaaaggc tttttgattt taatataaat taaacttgct
     5941 aaaatcacaa aaacaattat aataattaaa atttgagtta aataagtttt aatcaactct
     6001 tcattttgtc ctatataata acccaaaaat acaagtatag ccacccaaat agcactacca
     6061 agtgcagtaa aaagtataaa atttacaagt ttcattttta ccaaacctgc aggcatagag
     6121 atgtactgac gaatccctgg taaaagacga caagtaaagg ttgaaaattc cccatgtttg
     6181 ttgaaaaatt cttcaaattt agcaaatttg gcttcgttta taccaaaata cttaccccat
     6241 tttaatacaa aatttttacc ccaaaaaaag caaatataat aattaatcaa agcccctaaa
     6301 acagaaccta aagtcccact aagtatacaa agagtgatat caagttcgcc tttatgtgcc
     6361 aaatatccag caggtatcat aacaacttca cttggaaaag gtataaaaca actctctaag
     6421 gtcattaaga taataatacc caaatacccc caagcactag ccgtctcaac aataaaagaa
     6481 atgatttctt gcatattagc cttatttgaa gaaaatttta aaaaattgta gcttaaaaga
     6541 ttaaacagta aaaagcggtt ttataccgct ttttttattt acctgcaact gaaacttgat
     6601 ttggattgtc cgctgcacga gcgatcatac actcttttaa aacagcagca tcagctggat
     6661 cgctaacttt tttattaatc cagcgttcaa cttgtttcat tgtttttgac tctggctctg
     6721 gagcttcgta ttttgccatc aaacttgcac aatcagccaa agcaatgata ggtaataaac
     6781 ttgcaaaaag tatttttctc atcttttgct ccttagaatt ttacattata cattaacatg
     6841 atattatcag ctcttgcttt atcttttttc gctccaccaa atggtaagcc acgattaccc
     6901 caaatatttt ggatattagt atagcttaag cgtaagaatt gatatctatc aagttgataa
     6961 atcacataaa aatcatgtgc tgttcctctt gtcattctta tattaagtgg atcgttgata
     7021 cttggacggc tcatagtata ccagtatcta cttccccaga agaactcata ccctactttt
     7081 aaagccttgg taaaatcata gcgtccgcct acatgtacag catagccatc ttcttcatta
     7141 aatttaccat taccataacc ttgcctttta ataattgcac ttaatgtagg gcttaattga
     7201 ttgttgttcc cgtgagaata acctaaagat agaaaataat taaaattcgt tccaaaagct
     7261 ttataatttt caaaatgaag atttgctata gttaaatctc ctaaatttac cacaccatca
     7321 tcatcaagaa tagtagtagc accgctacca gtaccaggta aagcaattgg accattgtta
     7381 agtggcaaag caaaatcgct taaatatgca atattaaata atattaaatt atctcccata
     7441 ccttctatag gaagctctcc ttctactgca gcatagtaaa gatttgcatc agcatctttt
     7501 tgatcgctca tccagtctct taccttgcct tcttcatccc attgataggt tttaccataa
     7561 gctgcacgga tagctacctt atgatcttgc aaactttcag gcttataagt gatcactgct
     7621 gcatcaccta gagcattaat cgctaaggct ggataagttg attgtcttaa agcattgttt
     7681 ctaagattac ttcccggacc atcggttcct ggctgtcttc ctacggttgc aatccactca
     7741 ggtgtgatat agtagtcaag ataagctcta tctacataaa gtacaggccc acttgatctt
     7801 gtgtttcttc ctgcatctaa gtcataaggg cttccactcc aacccatttg agaccagttt
     7861 ttagccatag ataaacgacc atagaatttg gttttattat taatatcagc attcatattt
     7921 aaatgaagct cattcatcca tttgttatta gcactataat cttgtccgct aactttatag
     7981 tttgtatttg aaactgctgt tgaaaactca agtccaaatt taaccttgct caaagcagct
     8041 tggaattctg tttcatcggc tctatcatta agatcagcaa gttcagcttt tacagcttca
     8101 ttttgcttag cttgagcttc cctttctttt ctgatttgtg caagttcagc ttgaatttgt
     8161 gcaagctgtt tttgaagctt ggttatctca tcatctgtat ttttagcaaa aagtgaagat
     8221 gaaagaagac aagcacttaa aataagtgaa aacttagttt tcataatcat aactccttgt
     8281 aattttgtta catttagcaa attaaaattg tgattataga aaaaaaagtt taaaaaaaaa
     8341 ttatacatta atcattttta gctagtcaaa cttatgacta gctttgtaaa tattgtagtt
     8401 ttaaaaaagt tttaaatttt taaattttat cgcaaatttt tatgtctaaa attttatctc
     8461 cttggcgtat agagtctaga acttctaaac tttcttcatc ttttggatca atttgcccaa
     8521 aaacagtatg aaccccatct aaatgagctt gagggctgtg acaaatgaaa aattgagaac
     8581 cacccgtatc gcgtcctgcg tgtgccatag ataaggttcc acgctcatgt ttatgctctt
     8641 gatcatcaca ttcgcaaatg atttcatatc caggcccacc tacaccattg ccgtgtggac
     8701 aacctccttg tatgacaaaa tttgggatca cacgatgaaa atttaaatct ttataaaatc
     8761 cctcattagc caaagtagca aaattacaaa ccgtttgcgg agcctcatcg ccaaaaagtt
     8821 ttaatttcat tgtgcctttt tcagtttcta taagagcaaa tttgtattca tttactttgc
     8881 ttgtgtcgat tgtttttatc attatttctc cttaatctat atttgtataa acagcttgaa
     8941 catcatcatc ttcttctaac ttatctaaaa gtttttctat atcgctaagc tgttcttcgc
     9001 taaagcttac aggattgttt ggtatatact caagtcctgc ttttttaaga actaaaccct
     9061 tagcttctat agcagaactt agctcaccaa aggcagtata atcaccgcta attactaact
     9121 cttcttcatt ttgttctaat tcttcaagcc ctgcatcgat caaatcaagt tctaattctt
     9181 ctaaatctcc tgcaaatttt tcaagatgaa aaaccgcttt tctagtaaac ataaagccta
     9241 aagatccatt ttgcaaaact tctccaccat ttttgctaaa aatggcttta acattagcca
     9301 cggtacgcgt agggttatcg ctcatacatt caactataac caaagctcca tgtgcagctt
     9361 ttccttcata atgaatgttt ttaatatctg cgctatcctt tccactcgca cgcttaatag
     9421 ccgcatctat attatctttt ggcatattat ttgcttttgc tgtagctata gcacttctta
     9481 attttggatt catatcagga tcagtgccac cttctttagc agctacttgt atggctttag
     9541 caagcttagg aaaaagctta ctcattttat cccatctagc ctctttagaa gctcttcggt
     9601 attcaaacgc tcgtcccata aattctcact ttctttaaag atttttaaac ttaaaagtat
     9661 aaactaaaaa ggctaattaa agctttaaat ggtatgattt taccatttat ttttggggag
     9721 aagctttttg aatatcgcaa aaaaagaact ttttgttgct tggtttttct tgattgctgc
     9781 tattgtattt gaagttttag gtactagttt tttaaaaatg gaaaatcaaa ttttaggcta
     9841 tatatttatg gctttattta tagctttttc ttattttttt atgggcaagg cgattaaaaa
     9901 aattcaagta ggcatagcct atgctgtatg ggaactttta gggattattc ttatactttt
     9961 agtttctttt atagttttta aagagagttt aaccttaact caaattctag gcattgttct
    10021 ttctatcgtt ggaattatca tgattaatat aggcgaggtt aaagaataat gtatattttt
    10081 attattgttc tatcggcatt gttagatatc gtagcaaatt tattgctaaa aaaatcagat
    10141 ggttttaaga ataaaatttg gggcttagct gcgattgtca atgctatact tgcttttttt
    10201 ctactttctt tttctttaaa atatgttcct ttaagcatag cttactcaac ttggggtgct
    10261 ataggcatca taggaacttg tcttggtgga tggattttat ataaagaaaa attaaacaaa
    10321 ataggaattt taggtatcat tatcgtgata atagcagtat ttttgctaaa ttattaaaac
    10381 agcaaaatgc tgttttaatg ttccattttg ttttttgctt caatacccat taaagaaaat
    10441 gcggttttaa tactaagagc aaccaaagaa aataatttaa gtaaatcatt ttcatttgca
    10501 gagcctacaa ctttattttc attgtagaat ttatgaaaat ttgcagctaa atttttaaga
    10561 taatcaggaa ttttttgcaa agctctagcc tcaaaagcat catttaaaat agcctttaaa
    10621 ttcaaagctt caaagagtaa atttacacca tcttgattta aactttgtaa atcagctttc
    10681 attacatcat cgattttttt accagcttta gcaaatactt gatgaattct agcgtgtgca
    10741 tagttgatat aatacacagg attagaacta tcttcttttt gcaaatcact aatatcaaat
    10801 tccaaatgcg tatcgcattt tttgctcaaa aagatataac gcaaagcatc acttcctatc
    10861 tcatcaacca catcgctcat caagataaaa tttcctgctc ttttactcat tttataaggt
    10921 tctccatctt taagtaggga aaccatttgt gctaaaataa tctcaagatt attagagtca
    10981 aatcccaaaa attccatcgc agctttcatt ctagggatat aaccatgatg atctgctccc
    11041 cagatattaa tacactttcc ataaccacga ctcattttat ctttatgata aacaatatct
    11101 gctgccaaat aagtcccgcg tccatcttca cggataatta ccctatcttt ttcatcgcct
    11161 ttttgcgaag aagcaagcca aattttacct tcttgctcgt aaattccttt atgctctttt
    11221 aaagattcta aagttgcatt taaagcatca taatacgatc tttcgcttac atagctgtca
    11281 attttaatct ttgcttgttc taaattttgt ttaatcaaaa caagcatttt atcttttgcc
    11341 caatcagcca aactagggat attttcttgg ctaaaaaatt ctttaccaaa tttttcaaaa
    11401 gcttcttttg ctaaatccgc tatatactcg cctttgtaat attgctctgg atattcaaca
    11461 ttttcatgaa gtatattttc tttcacactt agtaaaatag aaagccctag taaataaatt
    11521 tgattacccg catcattgac atagtattct gtatcgaatt tatagcccaa atgtcttgca
    11581 agtcttgtta aggtgtctcc aaaaacagcg cctcttgcat gtcctatgtg taaaggccca
    11641 gtaggatttg cactcacata ttcaagcaaa aaactttctt gttttttttc tcctttagca
    11701 aaatcatttg gatttgttaa agcctgattt gcaagttcat ttaaaaaagt tttggaaatt
    11761 ctaaaattta aatacccatt tacagcttca actgattcaa aacaatcatg attttgaaat
    11821 ttgctcgcta agtcactagc gatcaacata ggagattttt ttaactcctt agccagtgaa
    11881 aaagccaaag gggtagcaaa atgtgctaaa tttttatcct ttggattttc aagtgcaaaa
    11941 tcacactcta aaatcttttt aatttcatta aaaataatac ttttcaaaag actaaacctt
    12001 aagctttttt tgtttcgtct atacttgcat cagtatttgt attattagtt gtgtttttat
    12061 tttcttctat tttttgagta ttttttgcta cttcatcatc attattcatt tcatctttaa
    12121 aagttttaat acctttacct aaaccctttg caagttctgg aatttttttt gctccaaaaa
    12181 gcaatacaac aatcaataaa ataatcaacc aatgacttgg acttgaccaa ccacccattt
    12241 tattctcctt cattccaaat attttgaatt tgccctagat tctgcccttt ggttctaaat
    12301 ttatgggcaa ttaaaatcgc tcgcaatgct tcataacttt gctttagctc atcattaatg
    12361 ataagataat catagtcgct aagttctttc atttcatcac tagcgttttg taatcttttt
    12421 tctagttgta ttattgtatc agtatttcgc ttaataagtc ttttttttag ctcatcttta
    12481 ttttttgtag taataaaaac agaaacaatc ttatcagcca ttttttgtct ggctatttta
    12541 aatccttgca catcaatatc aaaaacaact atttttccat tatctaaagc atcttgagtg
    12601 tgctttaaag aagtgccata aaaattttca tgcaccttag cccattctaa aaaatgatca
    12661 ccatctatac ctttttgaaa ttcttcatgg gatatgaaat gataatgtat tccatttttt
    12721 tcaccctctc ttggtttgcg agttgttgaa gaaatagaaa aataaagctc atcttcaaat
    12781 tcatcaaaaa gtttttttaa aagagttgat tttccagctc cactaggacc tgaaatcaac
    12841 aaaataaaac cttgcaattt taatcctctt taaaactaat gtttatattt atattcatat
    12901 tcataccctt aagagcagct tttaaggtat catccttaat acttgaagtg atcgctcctg
    12961 ctatgctttg gctaagctca ttaactatct cttcactatt atcatcttta gttgcattgc
    13021 ttactatagg ctcttcattt ttttctacaa tttcctctcc aagagcttct tgtatatcac
    13081 tttctttcaa tgcatcaaaa tcacttatat ttaaatttgg cacaaccact tcctcttcat
    13141 ttgttcctaa ttctgtatcg tctaaaattg gctcatcttt aaaatcttct aaaaccttgc
    13201 tactattatc actatcaata ccataatcaa gctcatcaag ttgagctagt tcttctttga
    13261 tttgatcttg agtgctcaaa tttgaaataa aatcatccat ttcatcttga acatcttctt
    13321 ccacaacagg agaaaactcc tctaaatttt cctctgattc ttcattatct tttgcttgac
    13381 ctaaaaattc agcatcctca ggaatatcat caaaatccat ttctttttct tgctcttcaa
    13441 ccacaggaag atcatcaaag tcgcttatat tagcttgtaa ttctttgtta t
//
LOCUS       DAPWGO010000040        13421 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.041, whole genome shotgun sequence.
ACCESSION   DAPWGO010000040 DAPWGO010000000
VERSION     DAPWGO010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13421
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.041"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            1241..2179
                     /locus_tag="RJ336_001037"
     CDS             1241..2179
                     /locus_tag="RJ336_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213489.1"
                     /translation="MANIEQGIKDKEQELEEIKKQIEEALNNNDELKQKNEELKEIKN
                     QIDEALSQEPPADTSELEERKEELENQIAELEKEIAGELINKKEEIEKELEEANQNLE
                     DKNNELEQNEKDKKLITQKVLDITIKTLEALIDTKVSLNGDEEINGNKTFANPILVKV
                     VPTNDNHLTNKIYVDTALKTKANLNGDNIFNGANTFNQALTSPTNPTNDNHLTRKWYV
                     DYGGGIKNLGTTGSINLDLRQAQHFILTANAGTSIGIANFGGVGKSGTITINNCQNVV
                     AFNAPFKFRIAQSGFSGTETFAYFCIDSNNVRLVRT"
     gene            2181..2630
                     /locus_tag="RJ336_001038"
     CDS             2181..2630
                     /locus_tag="RJ336_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213490.1"
                     /translation="MNCLLLSNNGIALNLPPSLGGSVANYNYMLKLDMIYKQAVVLPS
                     NINNKEVVMLGEVWTTGNMSNKTSANTLEITWNNFNSKVTLHALSKYYTANAKIKVEK
                     KFNFGNINNLQIMLSSWQSGSANASAGWNLNDGDRLNPRANLTLYWN"
     gene            2643..3278
                     /locus_tag="RJ336_001039"
     CDS             2643..3278
                     /locus_tag="RJ336_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HDZ5213491.1"
                     /translation="MFYDLKNKSLKYDDIFLKDVKIQNEEGEIDAQDTYFLSACDDKL
                     LKELGFAKVKEEEIPSFNEKIEELRQIQTYDEENNLYIISYEIKEKALEELKELKLEE
                     LKAIKEEKLLFMPFKNTIFQIDTEAKINISGKVSEIMLANLNNTPLENIAWIDKDNKI
                     ITFNKEEFLEFGVGIAKYTESIIFKNDELRNKVKNATSLEELNLIAWESEK"
     gene            3275..3658
                     /locus_tag="RJ336_001040"
     CDS             3275..3658
                     /locus_tag="RJ336_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213492.1"
                     /translation="MSTENIIKEGAILGSLSGSALLGLMVFVLAGIAWHLYKTLHKEA
                     GERTKELISETKNTNVLIREQIAVSRASSDSLVKFIETHCSKTNDKLEAIETDLMRMD
                     ERLVKLTQIRNDELRSIFKKKENND"
     gene            3651..4025
                     /locus_tag="RJ336_001041"
     CDS             3651..4025
                     /locus_tag="RJ336_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1353 domain-containing protein"
                     /protein_id="HDZ5213493.1"
                     /translation="MTKTELKRVCVKPYDKDRFEVIQDYEFILPNYKGIVPQGFKTDG
                     ASIPRLFWSLFPPFKSEYFSACVVHDFLCEKAKSRKDYKLADLVLKEAMQALEINKFK
                     IFVFYCSCNLFHQIKCLIKGIR"
     gene            4022..4783
                     /locus_tag="RJ336_001042"
                     /pseudo
     CDS             4022..4783
                     /locus_tag="RJ336_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049724.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5322..5798
                     /locus_tag="RJ336_001043"
     CDS             5322..5798
                     /locus_tag="RJ336_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213494.1"
                     /translation="MKITINRRYTGKTCVIGKFKVLDDEEKILFECFSLERKEEGLES
                     GKNLRIPAGVYDLKRHINSSFNDKGKKEVAGVIVLKEDDSVLNIYNNDVDFERHILIH
                     WGNTYKDTKGCILLGLTKDNNNESVGQSRLACKEFYDLMYGKNLEDIKLEITNELA"
     gene            5804..6223
                     /locus_tag="RJ336_001044"
     CDS             5804..6223
                     /locus_tag="RJ336_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004306038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213495.1"
                     /translation="MFSYILGDKKLYIALVLMTILAGYFYLRLDSTQAKLEKSQSNLA
                     LALKINENNQEKLKELNQIHKTELKALNEANNQKNQVQERVQYVKEYIYKSNENNITK
                     LFNDVVDRLWDANSTSSNQNRNSKSKNSARTTNIKPP"
     gene            6141..6338
                     /locus_tag="RJ336_001045"
     CDS             6141..6338
                     /locus_tag="RJ336_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213496.1"
                     /translation="MQTQQVVTKIEIQKVRIPQELLTLSPLEKPKAKNELDILNAYSM
                     LFYKYKQCEIQISKIKELNNE"
     gene            6331..6822
                     /locus_tag="RJ336_001046"
     CDS             6331..6822
                     /locus_tag="RJ336_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002792600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213497.1"
                     /translation="MSNTNVDYNKRLEAFKEIYPQILEMSLAEKSPFGEFKKLLEQFG
                     NDNVIRNDQQFQSLAQALVSVGQTIVAQSQNTALSMILQGDENELNAEKALLLRAQTE
                     TEKAKPALIARQTSQIDDNLRIEAAKVTQSVQFGYCTGGLDIPQEIMKLVKEKIENIE
                     KSS"
     gene            6822..8546
                     /locus_tag="RJ336_001047"
     CDS             6822..8546
                     /locus_tag="RJ336_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213498.1"
                     /translation="MLIDEKRLMRNYTLKPAYPSNIGELDTQEVYKQWFTYAMIGVNK
                     YVELLHKQLVRKGRSQIQNINHPLFKNSYIVKKYNIKSSSTAPYNKENYNDLGLNQFF
                     VGQDPYKPYQGDPSSENGIYHDICEIRTNYNLGSMQYYYGFPNNLALLFEKEKAWKYN
                     GKGFFYIDEKINFKDILNKALENINYEMLINDIEVVIFSQTIQKNNEWIYPSIDDIKI
                     PEIKVENVEFKPTFGKPYKKLCIDVEKFYNDFKELNKNIFRIEKVEITYNVYEKAQKT
                     RESDPSKIYYTLTSKKISFFEVFNSIKENYKCKYTTPLCFYNGFNLVCYEEPYVAYSY
                     LNNQSFGKKDTSVTPSVYPLYRKSSNLPYGRRDRWFALWDSFYYLYVYEKSSKGILSF
                     LAPIVTIILAVATWWIGGQGAWLGTLIGVSENVAAGITLGISLGLAVGSLTGNKLFSI
                     LNAVWGLVNFLGAWGANNWNLAADFTKNTAQAAQEMTTFESTLNIVGNLLSGASKIFD
                     VVQSITAETPDMINEQSDDSDNEGGNGSEAEELAKDAINPTLWYNFETADILNEKIEK
                     KEKPIFIF"
     gene            8663..8812
                     /locus_tag="RJ336_001048"
     CDS             8663..8812
                     /locus_tag="RJ336_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213499.1"
                     /translation="MIKIAFFITFVISFLTAQSPVNFKEDNNITKEQNIFKEQPPKRI
                     KIPTH"
     gene            8818..9519
                     /locus_tag="RJ336_001049"
     CDS             8818..9519
                     /locus_tag="RJ336_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HDZ5213500.1"
                     /translation="MSDLITLAQLSQGYRYNSDSLILADFILKQGIKGAVFDVGAGCG
                     IIGILLKKNIANLSLSLIDIQKENIKLIEKNLKSNQIQGDIFHDDFNQFQSIKKFDFI
                     VCNPPFYRQGAYKSEDQHKAISKFQEFLPLHSFLTKANSMLKPNGTLYFCYEALALDE
                     ICFILKDIKIKITKLCFVHTHQNKKARLVLIQVKKGSKSPCEILPPFFVYENEILSKQ
                     MQEIHLRFRLKSYDI"
     gene            9509..9883
                     /locus_tag="RJ336_001050"
     CDS             9509..9883
                     /locus_tag="RJ336_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HDZ5213501.1"
                     /translation="MIFDKNFSYAFDENACEKCGGKCCTGESGNIFASKEELEALRKH
                     LNLESKEFAEKYLRKVGFKMSFKEVEFEDGFACIFFDTQKRNCSIYDFRPKQCRTFPF
                     WEYFKTHQKELEKECIGICYLF"
     gene            9856..11133
                     /locus_tag="RJ336_001051"
     CDS             9856..11133
                     /locus_tag="RJ336_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent nuclease subunit B"
                     /protein_id="HDZ5213502.1"
                     /translation="MYRYLLFVLAAFFLAACGSSKINVVYPDYTKYKSNDFDLRVMKA
                     YNYEYYKQYKEARDEFLSLYQDYNNTNFLENAFLLTLANNLDKQAELNNLAKPYLNQN
                     DNLKRLSALYALNSNDINNAQKLMKELLTKKDSDPRNLELYGDILVKKNDLKNATKYY
                     RSAYNQVQNEEILFKLIGIYAILNDTLNIKNVLEFSRKTNGCTLKTCVLLAKIYFDEK
                     NIEALKSIYKELYQLTKNKSFALALVELLNSQGKTEEALKISLQYDLDDDIKLALYQN
                     LKRFDDAKKMSLALYHKTKNKEYLLRAAVFEFEAANEAKKITPKVIDSVKEKFEQAID
                     KDSNALYLNYYGYLLIDYDLDVKKGIELVKLALEKDPQNLYYLDSLAWGYYKLGDCRQ
                     AWEILKQTLDDKEFANSDESKAHIKAIKACVKP"
     gene            11130..11906
                     /gene="trpC"
                     /locus_tag="RJ336_001052"
     CDS             11130..11906
                     /gene="trpC"
                     /locus_tag="RJ336_001052"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HDZ5213503.1"
                     /translation="MILDKIFEKTKEDLKERKLKLPYDMLGRSLASNPFFPKDVIKAL
                     KRVEKEVKIIAEVKKASPSKGVIREDFDPLSIALNYEKNKAAAISVLTEPHFFKGSLE
                     YLSLIRRYTQIPLLRKDFIFDEYQILEALVYGADFVLLIAKMLSMKELKKLLEFARHL
                     GLEALVEIHDKEDLSKAIFAGADIIGINHRNLEDFTMDMSLCEKLIPQIPNSKIIIAE
                     SGLENKEFLEHLQNLGVDAFLIGEYFMREKDEGKALKALL"
     gene            11916..12401
                     /locus_tag="RJ336_001053"
     CDS             11916..12401
                     /locus_tag="RJ336_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HDZ5213504.1"
                     /translation="MQYLYAPWRSEYFEKEKSICPFCDCANKIKSDEDLGVIFRAKHC
                     FGVMNRYPYSVGHFMVIPYVHEEHIENLSDEIWQEMSHFVRLGVKILKEQIHANGVNI
                     GMNLSKDAGAGIAPHCHYHLVPRWAGDTNFITTIGETRVCGTNIEQVYQKLVLAFKNA
                     Q"
     gene            12391..13395
                     /gene="mnmH"
                     /locus_tag="RJ336_001054"
     CDS             12391..13395
                     /gene="mnmH"
                     /locus_tag="RJ336_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HDZ5213505.1"
                     /translation="MLSEVEFAEFQKENFSLLIDARSPREFLHSHLIGALNFYALNDE
                     EYQEIGTIYKKNQALAKARGASYICQNTAKHILKITQNFRIGEKVGIYCSRGGLRSKS
                     IAVILSELGFRVVRLKGGFKAYRTFVTHYFENEINFDFFTLCGNTGCGKTELLEQLPQ
                     AINLEKIANHLGSSFGDILGKQPTQKAFEAELFHNMQNLENFAFIESESRKIGDIILP
                     LKFYEKMQKAFKIYCFCSLENRVKRIQKIYQEKMTPLKFQQCVQKISPYISLNLRQDL
                     LQSYERKEWQRLITMLLEYYDKTYKKPDKIDLELNTDDILKAKEEILRYFKLKNYILI
                     "
BASE COUNT         5430 a         1508 c         2321 g         4162 t
ORIGIN      
        1 aaaagaatat tttgatttga acacaaaaat taaagatgaa attttaagtg aacttaatca
       61 tgctttagaa attgtagata gcttacattt aaatgttgat gaattaaaag aaataaaacc
      121 tgaattaata agtattaaaa aagaagtaaa agatttagca aatgaagcaa aattagtagt
      181 aagtgaagca agcgaaatta taaaaaataa aattaacact atattctttg aaaaccaaag
      241 attaaatcaa gaaatgatag atagtgttaa aaagctagaa gaaattaaat ttgatattgg
      301 agttaaatat aaagaaatag ctagtgcata tgaactactt ttagaaagca agcaaaatat
      361 agaagattta agagaagtta tagctttata taaagaattt gaaaatgata taacatctta
      421 ttcccaaatt ataaaagatt ttaaaagtaa aatagaaaat ttagaacgag atttaaaatc
      481 acagtctgaa agtatctact cttctttaaa tgataaacaa aatgaaatat taaaaaaatt
      541 aaatgaagta aaaaatgaag ctttagttaa atttgatgaa cttacagcaa aatgtgaagg
      601 gtataaaata cattttgagc aaagttatga taggtttaat caaagagctt tgatagctaa
      661 tgaagattta ggtaggttag ctgaagttgc taaaaaagaa ctaggtaatg ataagttaat
      721 ttatgaaaca gaattaaaag ttttagctga agaaacaata aaacaaatgg aagaaatgct
      781 caaaggttta agtgatgaaa gaaatgaagt cacagaggtt tttgaaactc aaaagaaaga
      841 atttactact cttgtagata cttctaaagt tatgattgac aacttaaatc atatttttaa
      901 tgcgaattat caagcaaaga aaaatgagtt tagtattgtt tttaatgaaa aattgcatag
      961 tttaaacgag aataagcaag attttttaaa tgagcttgtg agcgcaaaag aaaacggact
     1021 caataaaata aatgaaacaa aagagcaaag ccttaatgaa ataatccaaa caaaagaaca
     1081 aggacttaat gagcttgaaa ctaaaaaagg tgagtgcata gatgagattg acaatcaagc
     1141 aagaatctat gatataagtg gtgttaaggc taatgttgaa tatcttcttt ctttgcttaa
     1201 tgagaaagat gatggtaaag atgatggaat taaagatgaa attgcaaata tagagcaagg
     1261 tataaaagat aaagaacaag agcttgaaga gataaaaaag caaattgaag aagctttaaa
     1321 caataatgat gaattaaagc aaaaaaatga ggaattaaag gaaattaaaa atcaaatcga
     1381 tgaggcttta agtcaagaac cacctgctga tacaagcgaa cttgaagaga gaaaagaaga
     1441 acttgaaaat caaattgctg agcttgaaaa agagattgct ggtgaattaa ttaacaaaaa
     1501 agaggaaatt gaaaaagaac ttgaagaagc taatcaaaac ttagaggaca aaaacaatga
     1561 gttagagcaa aatgaaaaag ataaaaagct aattacacaa aaagtattag atataactat
     1621 taaaacttta gaagcactta tagatacaaa agtaagttta aatggtgatg aagagataaa
     1681 tggaaataaa acttttgcta atcctatttt agtaaaagta gttccaacta atgataacca
     1741 tttaacaaat aaaatctatg tagataccgc tttaaaaaca aaagcaaatt taaatggaga
     1801 taatatattt aatggcgcaa atacttttaa tcaggcatta acttctccaa ccaatccaac
     1861 aaatgataat cacttaacta gaaaatggta tgtagattat ggtggtggaa ttaaaaatct
     1921 tggcacaact ggcagtataa atctagattt aagacaagct caacatttta ttttaacagc
     1981 aaatgcagga acaagcatag gaatagctaa ttttggagga gtaggaaaaa gcggaacaat
     2041 aactataaat aattgtcaaa atgtagtagc ttttaatgcc ccttttaaat ttagaatagc
     2101 tcaaagtgga tttagtggca ctgaaacttt tgcttatttt tgcatagatt cgaataatgt
     2161 aagattagta aggacttaaa atgaactgcc tccttctttc taataatggc atagcactaa
     2221 atttacctcc atctttagga ggctcggttg caaattataa ttatatgtta aagctagaca
     2281 tgatttataa acaagcagtg gtattgccat caaatattaa taataaagaa gtggttatgt
     2341 taggcgaagt ttggacgact ggaaatatgt ctaataaaac ttctgcaaat actttagaaa
     2401 taacttggaa taattttaat tcaaaagtaa cactacatgc tttaagtaaa tattacactg
     2461 ccaatgcaaa aatcaaagta gagaaaaaat tcaattttgg aaatataaac aacttgcaaa
     2521 taatgctaag ttcttggcaa agcggtagtg caaatgcaag tgctggttgg aacttaaatg
     2581 atggggatag attaaaccca agagcaaatt taacattata ctggaattaa gaaagggtaa
     2641 atatgtttta tgatttaaaa aataaaagtt taaaatatga tgatattttt ttaaaagatg
     2701 taaaaataca aaacgaagaa ggtgaaattg atgcacaaga tacttatttt ttaagtgctt
     2761 gcgatgataa gcttttaaaa gagcttggtt ttgctaaagt taaagaagaa gaaatcccaa
     2821 gttttaatga aaaaattgaa gaacttcgcc aaattcaaac ttatgatgaa gaaaataatc
     2881 tttatattat ttcttatgag attaaagaaa aagcattaga agagttaaaa gaattaaaat
     2941 tagaagaact aaaagctata aaagaagaaa agcttttgtt tatgcctttt aaaaatacta
     3001 tatttcaaat tgacacggaa gcaaaaatta atattagcgg aaaagttagc gagataatgt
     3061 tagcaaatct caataatact cctttggaaa atattgcttg gattgataaa gataataaaa
     3121 tcattacatt taacaaagaa gaatttttag aatttggggt tggtatcgct aaatatactg
     3181 aaagtattat ttttaaaaat gatgaactaa gaaataaagt gaaaaatgcc acatctttag
     3241 aagaattaaa tttaattgca tgggagagtg aaaaatgagt actgaaaata taataaaaga
     3301 aggtgctata ctcggttctt taagtggatc tgcattatta ggattgatgg tttttgtctt
     3361 agctgggatt gcatggcatt tatataaaac tttacataaa gaagctgggg aaagaacaaa
     3421 agaacttata agtgaaacca aaaatactaa tgttcttatt agagaacaaa ttgcagtatc
     3481 cagagcaagt agcgatagtt tggttaaatt tatagaaaca cattgctcaa aaaccaatga
     3541 caagctagaa gctatagaaa cagatcttat gagaatggat gaaaggcttg ttaagcttac
     3601 tcaaataaga aatgatgaat taagaagtat ttttaaaaaa aaggaaaaca atgactaaaa
     3661 cagaattaaa aagggtttgt gtaaagccat acgataagga caggtttgaa gtgatacaag
     3721 attatgagtt tattttacca aattacaaag gcattgtacc acaaggtttt aaaactgatg
     3781 gagcgagtat cccacgcctt ttttggtctt tgtttccacc ttttaaaagt gagtatttta
     3841 gtgcttgtgt agtgcatgat tttttatgtg aaaaagcaaa atcaagaaaa gattacaaac
     3901 ttgctgatct tgttttaaaa gaagcaatgc aagctttaga aataaataaa tttaagattt
     3961 ttgtttttta ttgctcttgt aatttatttc atcagatcaa atgtttaata aaggggataa
     4021 gatgagttta gaacaggtta taaatactca aaatgaaagt ttaaatcaaa ttataagtag
     4081 tttacaagaa ttagttttaa gttataaaaa tggtaatttg agtttagaag atgttaaaaa
     4141 attaattaac gaaactattg aaaatatatc aaatgattat ataaaagaaa gcgagctaaa
     4201 agaaaaacta gaagccttgc tagaagaact taatatcaat gcaaatatca atgaagagag
     4261 tttaaaagaa gttgtattaa aagttgtttt agaaaataaa gaaagtttaa aaggtgataa
     4321 aggagatcct tttacttatg aagattttac agaagaacag cttgaaaatt taaaaggaca
     4381 agatggagct aaaggagctg atggtaaaag tgcttatgaa ctttggcttg aaaatgaaga
     4441 aaacacggga aaaagtcaag atgaattttt agaaagttta aaaggcgata aaggcgaaga
     4501 tggtgataaa attagcgatg aaaaattaag gcaaacctta gaagaagttt ctaaaccctt
     4561 gcttgaagaa agttttcatc aagtaggaaa taccataaat aacactttaa gtattgtttc
     4621 aaatgcttta gaaaaaaatg ctttgctttg caatatcaca aacacacctc caccagaaca
     4681 aacacaaaca aataatggtt ataaaaaagg atttatttgg atagacaatt caaaaactcc
     4741 aaacgatatt tatgtaagtg attttacctc gtggattaaa gtagagctta gcaaagaacc
     4801 agaagtaaat agacttagat taacagtaca aacagcctta cgaggtggat ctgtttgctt
     4861 aagtgatgtt agattaataa aggaaaataa aactgctatt tatgctaaaa atattcaaat
     4921 agacaaagaa aacaaatcag ccacaggctt atatgatata gatggaaaag aatatgaagt
     4981 aagaataagt tctacaatca atgctgacta tggcgattac gatttaatta cgggtggtta
     5041 tatttgtgga acaaacttag cggttttaac accttatgaa tacattttag attttgataa
     5101 acctttacca aaaaatatca tcggtattgc tgcaaaacca acaggttatt ctcaaaattt
     5161 ttcaagttat ttaaatattg aagcctatgt ttcttctata ggaaaacctt tatttagctt
     5221 aaattttaca aattcatatt atagcgatgc aatagcaaga gattatactt taaatattag
     5281 agatggaagt gagataactt taaattaaaa aaggagaaaa aatgaaaata acaattaata
     5341 gaagatacac aggtaaaact tgtgttattg ggaaatttaa ggttttagat gatgaagaaa
     5401 aaattctttt tgaatgcttt tctttggaaa gaaaagaaga aggacttgaa agtggtaaaa
     5461 atttaagaat tcctgctgga gtttatgatt tgaaaagaca tataaattct agttttaatg
     5521 ataaaggaaa aaaagaagtt gcaggagtta ttgtattaaa agaagatgat agcgttttaa
     5581 atatttataa taatgatgtg gattttgaaa gacatatttt aatccattgg ggaaacactt
     5641 ataaagatac aaaaggttgt atcttgctgg ggcttactaa agataataat aatgaaagtg
     5701 tcggtcaaag cagactagct tgtaaagaat tttatgattt gatgtatggt aaaaatcttg
     5761 aagacattaa attagaaata acaaatgagt tagcatgagt tctatatttt catatatcct
     5821 aggagataaa aaactttata ttgctttagt acttatgaca attttagcag ggtattttta
     5881 tctaagactt gatagcactc aagcaaaatt agaaaaaagt caaagtaatt tagctttggc
     5941 tttaaaaata aatgaaaata atcaagaaaa attaaaagaa ttaaatcaaa ttcataaaac
     6001 agaattaaag gctttaaatg aagcaaacaa tcaaaaaaat caagtacaag aaagggtgca
     6061 atatgttaaa gaatacattt ataaaagcaa tgaaaataat attaccaagc tttttaacga
     6121 tgtcgttgat aggttgtggg atgcaaactc aacaagtagt aaccaaaata gaaattcaaa
     6181 aagtaagaat tccgcaagaa ctactaacat taagccccct tgaaaagcca aaggcaaaaa
     6241 atgaactaga tattttaaat gcttattcta tgctttttta caaatacaaa cagtgtgaaa
     6301 tccagataag caaaataaag gagctaaata atgagtaata caaatgttga ttacaacaaa
     6361 agacttgaag catttaaaga aatttatccg caaattttag aaatgagttt agcagaaaaa
     6421 tctccatttg gagaatttaa aaagctttta gaacaatttg gaaacgataa tgttataaga
     6481 aatgaccaac aatttcaaag cttggcacaa gcgttggtaa gtgttggaca aaccatagtg
     6541 gctcaaagtc aaaatacagc tttatccatg attttacaag gcgatgaaaa cgagcttaac
     6601 gctgaaaaag ctttactttt aagggctcaa acagaaacag aaaaagcaaa acctgcatta
     6661 atagctagac aaacttcaca gatagatgat aatttaagaa tagaagctgc aaaagttaca
     6721 cagagtgttc aatttggata ttgtaccggt ggtcttgata taccacaaga aattatgaag
     6781 cttgttaaag aaaagataga aaatatagaa aagtcttcat aatgcttata gatgaaaaaa
     6841 ggcttatgag aaattatact cttaagcctg cttatccatc aaacatagga gaattggata
     6901 cacaagaagt atataaacaa tggtttacct atgctatgat aggggtaaat aaatatgttg
     6961 agcttttaca taaacaactt gtaagaaaag gtagaagtca aattcaaaat ataaaccatc
     7021 cgctatttaa aaattcgtat atagtgaaaa aatataacat taaaagttct agcactgcac
     7081 cttataataa ggaaaactat aacgatttag gacttaacca atttttcgta gggcaagatc
     7141 catacaaacc ttatcaggga gatcctagta gtgaaaatgg aatatatcat gatatttgcg
     7201 aaataagaac taattataat ttaggaagta tgcagtatta ttatggtttt ccaaataatt
     7261 tagctctttt atttgaaaaa gaaaaagctt ggaaatataa tggaaaagga tttttttata
     7321 ttgatgaaaa aataaatttc aaagatatat taaataaggc attggaaaat ataaattatg
     7381 aaatgcttat aaatgatata gaagtagtta ttttttctca aaccatccaa aaaaataatg
     7441 aatggatata tcctagtatt gatgatatta aaataccaga aattaaagta gaaaatgttg
     7501 aatttaaacc aacttttgga aaaccttata aaaaattatg cattgatgtt gaaaaatttt
     7561 ataatgattt taaagaatta aataaaaata tatttagaat cgaaaaagta gaaataacct
     7621 ataatgtata tgagaaagca caaaaaacta gagagagtga tccgagtaaa atatattata
     7681 ctttaacaag caaaaagata tctttttttg aagtatttaa ctcaataaaa gaaaattata
     7741 aatgcaaata tacaactcct ttatgttttt ataatgggtt taatttagtt tgttatgaag
     7801 agccttatgt tgcttattct tacctcaata atcaaagctt tggaaaaaaa gatacaagtg
     7861 ttacgccaag tgtatatccg ttatatagaa aaagttcaaa tttaccttat gggcgtagag
     7921 atagatggtt tgcattatgg gatagttttt attatcttta tgtatacgaa aaatcaagca
     7981 aaggaatttt aagctttttg gcacctattg ttactattat tttggctgta gctacttggt
     8041 ggattggcgg acaaggtgca tggctaggaa cattgatagg agtgagtgag aatgtagctg
     8101 cgggtatcac actaggaatt agcttaggtt tagccgtggg ttcacttact ggaaataaat
     8161 tattttcaat tcttaatgct gtttggggtt tggttaattt tttaggtgct tggggtgcta
     8221 ataattggaa tttagctgca gattttacaa aaaatacagc acaagcagca caagaaatga
     8281 caacttttga atcaacttta aatattgttg gaaatttact aagcggagct agtaagattt
     8341 ttgatgttgt tcaaagcatt acagcagaaa ctcctgatat gataaatgag caaagcgatg
     8401 attctgataa tgaaggtgga aatggaagtg aagctgaaga attagcaaaa gatgcaatta
     8461 atccaacttt atggtataat tttgaaactg cagatatatt aaatgaaaaa atagaaaaga
     8521 aagaaaaacc tatttttata ttttaatttt tgtagccatt ttgtagccaa attaaatttg
     8581 aaatatttaa aatttatatt ttatggtatt ttatagttat tgttaggtgt tcgccgtgga
     8641 caccatttta tgaggtgtta ttatgataaa aattgctttt tttataactt ttgtaatttc
     8701 ttttttgaca gcacaaagcc cagtaaattt taaagaagat aataatataa caaaagaaca
     8761 aaatatattt aaagaacaac ctccaaaacg cattaaaatt ccaacgcatt aaaatatatg
     8821 tcagatttga ttacgctagc acaattatca caagggtatc gttataatag tgattcttta
     8881 attttagctg attttatttt aaaacaagga attaaaggcg ctgtttttga tgtaggtgcg
     8941 ggctgtggta tcataggtat tttacttaaa aaaaatattg caaatttaag tttatctttg
     9001 attgatattc aaaaagaaaa tataaaattg attgaaaaaa atttaaaatc caaccaaata
     9061 caaggcgata tttttcatga tgatttcaat caatttcaaa gcataaaaaa atttgacttc
     9121 atagtttgca atcctccatt ttatagacaa ggagcttaca agagtgaaga tcagcataaa
     9181 gctataagta aatttcagga atttttaccc ttgcatagct ttttaactaa agcaaattct
     9241 atgcttaagc caaatggtac tttgtatttt tgctatgaag ctttagcttt agatgaaatt
     9301 tgttttattt taaaagatat aaaaataaaa ataacaaagc tttgctttgt acatacacat
     9361 caaaacaaaa aagcaagact tgttttgata caggtaaaaa aaggttcaaa atcgccttgt
     9421 gagattttac ctcctttttt tgtatatgaa aatgaaattt taagcaaaca aatgcaagaa
     9481 attcacttaa gatttaggtt aaaaagttat gatatttgat aaaaattttt cttatgcttt
     9541 tgatgaaaat gcttgtgaga aatgcggtgg aaagtgttgc actggagaaa gtggcaatat
     9601 ttttgcaagc aaagaagaat tagaagcatt aagaaagcat ttaaatttag aaagcaaaga
     9661 atttgctgaa aaatacttga gaaaagtggg ctttaaaatg agttttaagg aagtcgaatt
     9721 tgaagatggc tttgcttgca ttttttttga tactcaaaaa agaaattgca gtatctacga
     9781 ttttcgtcca aaacaatgca gaacttttcc attttgggaa tattttaaaa cacatcaaaa
     9841 ggaattagaa aaagaatgta taggtatttg ttatttgttt tagcagcctt ttttttggca
     9901 gcttgtggaa gttcaaaaat caatgttgtt tatcctgatt atacaaaata taaaagcaat
     9961 gattttgatt taagggttat gaaggcttat aattatgagt attataaaca atacaaagaa
    10021 gccagagatg aatttttaag tctttatcaa gattataata atactaattt tttagaaaat
    10081 gcatttttac ttactttagc aaacaatctt gacaagcaag cagagttaaa taatctagca
    10141 aagccttatt taaatcaaaa tgacaatctt aagcgactta gtgctcttta tgctttaaat
    10201 tcaaatgata tcaacaatgc tcaaaaactt atgaaagagc ttttaacaaa aaaggatagt
    10261 gatcctagaa atttagagct ttacggggat attttggtta aaaaaaatga tttaaaaaat
    10321 gctacaaaat actatagatc tgcttataat caagtgcaaa atgaagaaat tttatttaaa
    10381 ctcataggaa tttatgcgat tttaaatgat actttaaata ttaaaaatgt tttagaattt
    10441 tcaagaaaaa ccaatggttg cactctcaaa acttgcgtct tgcttgctaa aatttatttt
    10501 gatgaaaaaa atatcgaagc tttaaaaagt atatataaag agctttatca acttaccaaa
    10561 aataaaagtt ttgcattggc tttggttgag cttttaaatt ctcaaggcaa aacagaagaa
    10621 gctttaaaaa tttctttgca gtatgattta gatgatgata ttaaactcgc tttgtatcag
    10681 aatttaaaac gctttgatga tgctaaaaaa atgagtttag ctctttatca taaaacaaaa
    10741 aataaagaat atcttctacg agcggcagtt tttgaatttg aagctgcaaa tgaagctaaa
    10801 aaaatcactc cgaaagtaat tgattctgta aaagaaaaat tcgaacaagc tatcgataaa
    10861 gatagcaatg ctttgtattt aaactactat ggatatttgc ttatagatta tgatttagat
    10921 gttaaaaaag gtatagagct tgtgaaactt gccttagaaa aagatccgca gaatttgtat
    10981 tatttagatt ctttagcttg ggggtattat aaactaggcg attgtaggca agcatgggaa
    11041 attttaaaac aaacattaga tgataaagaa tttgcaaatt ctgatgagag taaagctcat
    11101 ataaaagcga taaaggcgtg tgtaaaacca tgatattgga taaaattttt gaaaaaacaa
    11161 aagaagattt aaaagaacgc aaactaaaac ttccttatga tatgttaggg cgttctttag
    11221 cttcaaatcc tttctttcca aaagatgtga ttaaagcttt aaaaagagta gaaaaagaag
    11281 ttaaaatcat agcagaagta aaaaaagcaa gccctagcaa gggagtcatt agagaagact
    11341 ttgatccttt gagtattgct ttaaattatg agaagaacaa agctgcggcg atttctgttt
    11401 tgactgagcc acattttttt aaaggttctt tagaatactt aagtcttata cgccgttata
    11461 cacaaattcc tttacttaga aaagatttta tctttgatga gtatcaaatt ttagaagctt
    11521 tggtttatgg ggcagacttt gtattgttaa tcgctaaaat gctaagcatg aaagagctta
    11581 aaaaactgct tgagtttgca agacatttag gtcttgaggc tttggttgaa attcatgata
    11641 aagaggattt gagtaaggct atttttgctg gagcggatat tatcggtatc aatcatcgta
    11701 atttagagga ttttactatg gatatgagtt tgtgcgaaaa acttatccca caaatcccaa
    11761 attcaaaaat catcatcgca gaaagtggtt tagaaaataa agaattttta gagcatttgc
    11821 aaaatttagg cgttgatgct tttttaatcg gcgaatattt tatgcgcgaa aaagatgaag
    11881 gaaaggcttt aaaagctttg ctttaaggag ggaaaatgca gtatttgtat gcaccatggc
    11941 ggagtgagta ttttgaaaaa gaaaaaagca tttgtccatt ttgtgattgt gctaataaga
    12001 tcaaaagcga tgaagattta ggcgtaattt ttagagcaaa gcattgtttt ggagtgatga
    12061 accgctatcc ttattctgtg gggcatttta tggtgattcc ttatgtacat gaagagcata
    12121 tagaaaattt aagcgatgaa atttggcaag aaatgagcca ttttgtgcgt ttgggagtga
    12181 aaattttaaa agagcaaatt catgcaaatg gggtcaatat cggtatgaat ttaagcaaag
    12241 atgcaggagc tggcatagca cctcattgtc attatcatct agtgccacgc tgggcaggag
    12301 atacaaattt tatcacaacc ataggagaaa ctagggtttg tggtactaat atcgagcaag
    12361 tttatcaaaa acttgttttg gcttttaaaa atgctcagtg aagttgaatt tgcagagttt
    12421 caaaaagaaa atttctctct tttaatcgat gcaagaagcc ctagagaatt tttgcattct
    12481 catttgatag gagctttaaa tttttatgca ctcaatgatg aagaatatca agaaatagga
    12541 acgatttata agaaaaatca agctttagcc aaggctaggg gtgcgagtta tatttgtcaa
    12601 aataccgcta agcatatatt aaaaatcacc caaaattttc gcataggaga aaaggtgggg
    12661 atttattgtt ctcgtggggg tttgcgttca aagtctatcg cagtgatttt aagtgagctt
    12721 ggctttagag tggtgcgttt aaaaggtggc tttaaagctt atagaacttt tgtaacgcat
    12781 tattttgaaa atgaaataaa ttttgatttt tttactcttt gcggcaatac aggctgtgga
    12841 aaaacagagc ttttagaaca actcccacaa gctataaatt tggaaaaaat agcaaatcat
    12901 ttaggctcgt cttttggtga tattttagga aaacaaccta cgcaaaaagc ttttgaagca
    12961 gaactttttc acaatatgca aaatttagaa aattttgctt tcatagaaag tgaaagtcgc
    13021 aaaatagggg atatcatctt acctttgaaa ttttatgaaa aaatgcaaaa ggcttttaaa
    13081 atttattgtt tttgttcttt ggaaaatcgc gttaaaagaa tacaaaaaat ttatcaagag
    13141 aaaatgactc ctttaaaatt tcaacaatgt gtgcaaaaaa tcagccctta tatcagctta
    13201 aatttacgcc aagatttgct tcaaagttat gagagaaaag aatggcaaag gcttattact
    13261 atgcttttgg agtattatga taaaacttat aaaaaaccag ataagattga tcttgagtta
    13321 aatactgatg atattttaaa agctaaagaa gaaattttaa gatattttaa gctaaaaaac
    13381 tacattttaa tttaattttt ttatcacttt gcaaaaaaat t
//
LOCUS       DAPWGO010000041        13360 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.042, whole genome shotgun sequence.
ACCESSION   DAPWGO010000041 DAPWGO010000000
VERSION     DAPWGO010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13360)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13360)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13360
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.042"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..456)
                     /locus_tag="RJ336_001055"
     CDS             complement(<1..456)
                     /locus_tag="RJ336_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HDZ5213506.1"
                     /translation="MKILLLNENPVVSRLVSLSAKKMSYDFEELNAYSENLGNYDVIV
                     VDSDTPAPLKILKEKCDRLIFLAPRNQNVDIDAQILQKPFLPTDFLNLLNNKDTNKHT
                     SIDLPILSNDENPYADISLDLDNLNLDDLPDENSLDINSEGMEDLSFDDD"
     gene            complement(513..1280)
                     /gene="fliR"
                     /locus_tag="RJ336_001056"
     CDS             complement(513..1280)
                     /gene="fliR"
                     /locus_tag="RJ336_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HDZ5213507.1"
                     /translation="MEFVNYLGDKNVVTFMLLLARMSGLIVFFPFFSHNSIPMVIKST
                     IVLFLTMYLYPLARLESLHLDSFFVLQLISEVIFGMIAGLMLQIIFAIIMMAGEQIAF
                     TMGFTMASILDPSSGTSMPITSQILNLLALMFFLAFDGHHLMLLFLSHSLGYISLGGF
                     YPHENLMHYLNMGMFNIFIIGFTMSFPILGISLLADVIFGLLMKTMPQFNLLVIGYPI
                     KIALGFVVLIAILLVMMQYFKNLILELFTHMQTLFFS"
     gene            complement(1267..1902)
                     /locus_tag="RJ336_001057"
     CDS             complement(1267..1902)
                     /locus_tag="RJ336_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213508.1"
                     /translation="MELLRAENLSHSFDYPLFEGLNLALNTKDCIAIQGSSGCGKSTL
                     LHIFSSLLIPKKGEVFFKGSSLYQIDENERLKIRRYDFGIIFQTHYLFKGFSALENIE
                     LASVLSGQNLDEKILKRLGIDTLLHQKIGKLSGGQQQRVSIARVLCKKPKIIFADEAT
                     GNLDFDNAKNVIELLISYVKENDAALFFVTHDNKLASFCDKTYTINANGIC"
     gene            complement(1915..2988)
                     /locus_tag="RJ336_001058"
     CDS             complement(1915..2988)
                     /locus_tag="RJ336_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDZ5213509.1"
                     /translation="MAEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREK
                     GLGKAAKKADRLAAEGLVSVKVSDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHI
                     QSNSLQSVEELHSSIINGVKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHT
                     NGRVGVVIAAACDSAEVASKSRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALV
                     AELEKENEERRRLKDPNKPEHKIPQFASRKQLSDAILKEAEEKIKEELKAQGKPEKIW
                     DNIIPGKMNSFIADNSQLDSKLTLMGQFYVMDDKKTVEQVIAEKEKEFGGKIKIVEFI
                     CFEVGEGLEKKTEDFAAEVAAQL"
     gene            complement(2988..3779)
                     /gene="rpsB"
                     /locus_tag="RJ336_001059"
     CDS             complement(2988..3779)
                     /gene="rpsB"
                     /locus_tag="RJ336_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDZ5213510.1"
                     /translation="MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKT
                     LRYFRYTYNIVRDAAAEGKTMLFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNF
                     GTIRQSIRKLEVIEKMEEDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIF
                     VIDTVKEKIAVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEA
                     INEGKALREQDGEALANEEKEITDEEKKEVLDEAMSEEDFGEEQE"
     gene            complement(3895..5058)
                     /locus_tag="RJ336_001060"
     CDS             complement(3895..5058)
                     /locus_tag="RJ336_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDZ5213511.1"
                     /translation="MLEKQMIKFILSKWNYGNFRIVFWDQEEFHVGNQSAKFSLIFKE
                     KIPFLKLFSDTSLVFAKHYMESKLEIEGDYDEIAKVLYYFSNKRFLKNTEDILSKIAQ
                     KQESKNIKSHYDIGNDFYKLWLDDTMSYSCAYFKEPNNTLYEAQINKIEHTLKKLDLK
                     EGEKLLDIGCGWGWLSIMAAQKYGVKVVGITISEEQCKKAKERVKELGLEDKIEIRLQ
                     NYQDLEFENYFDKVVSVGMFEHVGKENLGLYFMKVKQVLKPGGSMLLHSILAMFEGKT
                     NAWIDKYIFPGGYLPSLREVVSAMSEWDFHLLLAESLRMHYAKTLDLWDENFNKVLDK
                     VREKYDEEFIRMWDLYLRSCASAFRVGSVDLFQFLITKEINNNLSLTKDYIYK"
     gene            complement(5184..6308)
                     /locus_tag="RJ336_001061"
     CDS             complement(5184..6308)
                     /locus_tag="RJ336_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDZ5213512.1"
                     /translation="MREIKIFLVVVVFTALVYWGVEPYAHSVMKPHVAPANFDFSVED
                     TTFAKGIVEAKELALKDAQASGDAKRIESANKELEKAKEELSKVETLWADVAKIDFAK
                     GDAKKGKEFFENNCFACHGVKEDGITANITDSSMGVIPPDLSAAGAIFDEKFLAALIM
                     HPALALKVDHKFGDAFIMTAYNKDTSGESEEATNANIANVIAYLKDVSVKFEANEDAT
                     IKKDVEAKYAKMENSAQKVALMEKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQND
                     LKTYLGSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVGLTEAAQAKVVSYID
                     QVGDSKKEERKTTGIYVMIFFVILSIFAIGWKRSVWSKLH"
     gene            complement(6305..7555)
                     /locus_tag="RJ336_001062"
     CDS             complement(6305..7555)
                     /locus_tag="RJ336_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HDZ5213513.1"
                     /translation="MAQIRKANGLVDWLDQRLAVHKLLDVLMVKYWIPKQINFLWAMG
                     VILTTLFAVLFITGLLLVMYYKPDTALAFDSVNKTIMQEVDYGWLWRHMHGVAASVVF
                     LIIYIHMLTGIYYGSYKKGREMIWVSGMLLFVVFSAEAFSGYMLPWGQMSYWAAQVIT
                     NLFGGIPFIGPELVIWIRGDYAVSDPTLTRFFMLHVCLLPIVIIAIIAFHFYSLRIPH
                     VNNEISEELDFDLEAEKYMAGDTKGSKVIPFWPGFLSKDFMYISFFMIFFFYLVCFKF
                     EFAMDPINFDPANALKTPAHIYPEWYFLWSYEVLRGFFFDIAGIKAFDIGLAAFGIAQ
                     VIFFLLPWLDRSDVVKPAHERPLFFIWFWILLIDLIVLTVYGKLPPTGVNAWVGFYAS
                     IVFLLLLIVVLPVITIMERKGAKQ"
     gene            complement(7557..8060)
                     /gene="petA"
                     /locus_tag="RJ336_001063"
     CDS             complement(7557..8060)
                     /gene="petA"
                     /locus_tag="RJ336_001063"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HDZ5213514.1"
                     /translation="MATSESRRSFMGFAFGSVAAVGGVFSLVAMKKTWDPLPSVKAAG
                     FTTVDLSGMQDGELRTIEWRKKPIFILKKDASMPKDEKRDVVVDNAAYTVVIGLCTHL
                     GCIPAYQPSEQLFKCACHGGEFDTSGKNVFGPPPKPLEIPPFKIDGTKLVLGEEGPEY
                     KKMIAEA"
     gene            complement(8150..9436)
                     /locus_tag="RJ336_001064"
     CDS             complement(8150..9436)
                     /locus_tag="RJ336_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HDZ5213515.1"
                     /translation="MLAFFIFLSTLVLLFWRPWNLPIWVFSSLGAFFVFIFQLVDFKD
                     AYFVFSLVWDSSLTLVGLIILSFSLEALGFFDFIASKILHFSREKNQEKIYISTKKLM
                     LFLLIFVFFLSAFFANDGAILIITPIIIALFSTLKDCKNHAFILSSFLLSLSFLCDAS
                     SNALVISNLTNIITANYFKIEFLEFAKNMFLPNFFVLLSTIVMVFVLYVRVLPKRLEF
                     KLVKKEQISSKLFFLCIVFLFLFVISFFIGEIFDIKISFFALLWAGIFWLIVLKIQGK
                     KSIKILFEAPYGVLLFSFGLYMVVFALHKIGVSEILVKSYTFLMQDKSGIFGVALISA
                     FGSSVFNNLPMVLIGDLALKEYFENFSFDSLMIYAHLLGVNIGPKLTPIGSLATLLWL
                     GVLARKGINISFWQYCKFGFLITLPVLVFSLFALIV"
     gene            complement(9437..11296)
                     /gene="mnmG"
                     /locus_tag="RJ336_001065"
     CDS             complement(9437..11296)
                     /gene="mnmG"
                     /locus_tag="RJ336_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDZ5213516.1"
                     /translation="MFDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNP
                     AIGGLAKGHLVKELDAMGGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRII
                     ARNKLLKLPNLEISQEQASVLIVENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHV
                     GENKLQAGRVGELASVNLGNYLQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVN
                     PKAFSFRSKNFNPTQLPCYIARTNTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIED
                     KINRFSDKESHHLFIEPQTIDATEYYINGFSTSLPYEVQIQMLRSVKGFEDAKITRFG
                     YAIEYDYIEPTELKHTLELKKIKNLYCAGQINGTTGYEEAAAQGFMAGINASLSIDMK
                     EPLILRRDEAYIGVLIDDLVVKGTKEPYRMFTSRAEFRLLLREENAILRLGKYGYDLG
                     LLSEQDFTYIQNIANNLQKGLEFLLSKEFTPNNQNNAFLESLGEDKISSIVNLQKIVA
                     RASFDIEKLKKLDPMFETMDNYSLREILNEAKYYHYISMQKAQVEKMKNLSELKIPEN
                     FDFKSVSGLSNEVVEKLNHHKPPTIFAASQISGITPAALDILQIYIKMQKKKA"
     gene            complement(11382..11879)
                     /gene="cetB"
                     /locus_tag="RJ336_001066"
     CDS             complement(11382..11879)
                     /gene="cetB"
                     /locus_tag="RJ336_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetB"
                     /protein_id="HDZ5213517.1"
                     /translation="MSREIFLQEDSLITSKTDLKGKIVYANDDFLKYAGYTMGEVLNK
                     PHNIVRHEEMPKTVFKYLWDYMKEGKEIFAYVKNKTKDNNYYWVFANVTPSIDINNNI
                     IGYYSVRRMPNKSAISTIESLYSDLLRVEQQQGLNKGVEMLKNFCKDADKTYNELIFS
                     LQEAK"
     gene            complement(11897..13276)
                     /gene="cetA"
                     /locus_tag="RJ336_001067"
     CDS             complement(11897..13276)
                     /gene="cetA"
                     /locus_tag="RJ336_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetA"
                     /protein_id="HDZ5213518.1"
                     /translation="MVKNGLLLTIFLSIIGVLGVIFIHIFVGAIIFVLIAVLMIYLLR
                     QHKDEQIMIDKLLVLCRELKEGNFDNRIIYVKTKSKKLAEIADNLNNTIDGLEAYLRE
                     INTSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEVTARSTFKNALSRTLMD
                     LSLGNQNKDMSQISSSLNQDISMMKNVYDTVDAISHTATENGSEVDSLQSAMGSLMDV
                     VNSSKETVQTFVANSQNITSVVEVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVAD
                     EVRKLAERTQRSTSEISIAIQTMQQDFVNIQSGSEQVFNIVSESEERINKFSQAFKRL
                     EENSSALGVNFGSFAKRLILSVVKIDHILYKSNIYLNLNGAQNFNLESVDPISNLCQD
                     ERAQGVINELSSETELNLAKEFIKDNAKKAIEESSQDYIDQKAYDAIVNDIKSLEQRS
                     AEILAKLKI"
BASE COUNT         4677 a         2520 c         1625 g         4538 t
ORIGIN      
        1 atcatcatca aaactcaaat cttccattcc ctctgaattt atatctaaag aattttcatc
       61 aggcaaatca tctaaattta aattatctaa atccaagctt atatcagcat aaggattttc
      121 atcattactt aatattggca aatcaataga tgtatgtttg tttgtatctt tattattaag
      181 taaatttaaa aaatctgtag gtaaaaaagg tttttgtaaa atttgtgcat ctatatctac
      241 attttgattt cgcggggcta aaaaaatcaa tctatcacat ttttctttaa gaatttttaa
      301 aggtgctgga gtatcactat ctacgacaat cacatcataa ttacccaaat tttcactata
      361 agcattaagt tcttcaaaat cataagacat ttttttagca ctaaggctta caagtcttga
      421 aactacaggg ttttcattta aaagtaaaat tttcatcact ttaatccttg aaaaataatc
      481 actattttac gataatttca tttatccttt ccttaggaga aaaaaagagt ttgcatatga
      541 gtgaaaagtt ctaaaattaa atttttaaaa tattgcatca taactaataa aatagcgatc
      601 aaaactacaa agcctaaagc tatctttata ggatagccaa taactaaaag attaaattgt
      661 ggcattgttt tcatcaaaag tccaaaaata acatcagcta aaagtgaaat tccaagtata
      721 ggaaagctca tagtaaaacc tatgatgaaa atattaaaca tacccatatt tagataatgc
      781 attaaattct catgcggata aaagccacct aaactgatat aacctaaaga atgacttaaa
      841 aacaaaagca ttaaatgatg accatcaaaa gcaagaaaaa acatcaaagc aagcaaattt
      901 aaaatttgag atgtgatagg catactcgtt ccagaacttg gatctaatat acttgccata
      961 gtaaatccca tagtaaaagc aatctgctca cctgccatca taataatagc aaaaataatt
     1021 tgaagcatta atcctgctat cattccaaaa atcacttcac taataagctg taaaacaaaa
     1081 aaactatcta aatgcaaaga ttctaatcta gccaaaggat ataaatacat agtcaaaaat
     1141 aaaactatag tactttttat caccatagga atagaattat gtgaaaaaaa aggaaaaaaa
     1201 actataagac cactcattct agcaagaagc aacataaaag ttacaacatt tttatcacct
     1261 aaataattaa caaattccat tggcgtttat agtataagtt ttatcacaaa aacttgcaag
     1321 cttgttatcg tgagttacaa aaaataaagc tgcatcattt tctttaacat aggatattaa
     1381 aagctcgata acatttttag cattatcaaa atccaaattt ccagttgctt catcagcaaa
     1441 aataatcttt ggttttttac aaagcacgcg cgcgatactc acacgctgtt gttgtccgcc
     1501 gctaagcttt cctatttttt gatgtaaaag cgtatcaata cctaatcttt ttaaaatttt
     1561 ctcatctaaa ttttgacccg ataaaacact agcaagttcg atattttcta aagctgaaaa
     1621 acctttaaaa agataatgtg tctgaaaaat aataccaaaa tcataacggc gaatttttaa
     1681 tctttcgttt tcatctatct gataaagact agaaccttta aaaaaaactt cacctttttt
     1741 tggaattaat aaggaagaaa atatatgcaa aagagtagat ttgccacaac cgctactccc
     1801 ttgaatagca atgcaatctt tagtatttaa agcaagattt aaaccctcaa aaagcggata
     1861 atcaaaacta tggcttaaat tttccgctct taagagttcc atttttaacc gtttttaaag
     1921 ttgtgcagca acttcagccg caaaatcttc agttttcttt tctaaacctt cgccaacttc
     1981 aaagcaaata aattcgacaa ttttaatttt tccgccaaat tctttttctt tttcagcgat
     2041 cacttgttct acggtttttt tatcatccat tacataaaac tgacccatta aagtaagttt
     2101 gctatcaagt tgagaattat ctgctataaa gctattcatt ttacctggga taatattatc
     2161 ccaaattttt tcaggtttac cttgagcttt aagctcttct ttgatttttt cttcagcttc
     2221 ttttaaaatt gcatcgctta attgtttgcg acttgcaaat tgaggaattt tatgttcagg
     2281 tttatttgga tctttaagtc tgcgtctttc ttcattttct ttttcaagtt cagcaaccaa
     2341 agctttgtat tcattttcaa caaaagtcat atccaaatct tcataactta aataacttgg
     2401 tctcattgct gcaatatgca tacaaatttg tcttaacaaa tctcttgatt ttgaagccac
     2461 ttcagcgcta tcacaagctg cagcgatcac aacaccaaca cggccatttg tatggatata
     2521 accatttaca acaccgttag cacctgcttt taaagttgca aatcttctta caactaagtt
     2581 ttctcctata gttgcaattt gactttttaa atattcttca aattttacgc cattgattat
     2641 gcttgaatga agttcttcca cactttgtaa gctattactt tgaatatggg ctgtggtatc
     2701 ttttgttaaa gcgataaact gatcattttt tgccacaaaa tctgtttcgg aattaatctc
     2761 acttacagtt gcacttgtaa aatcatcact tacttttaca cttactaaac cttctgcagc
     2821 aagtctatct gcttttttag cagccttacc taaacctttt tctcttaaaa gttgtactgc
     2881 tttatcaaaa tctccattag tttcactcaa agcattttta caatccatca tccccgcgcc
     2941 tgtactttcg cggagttctt ttaccattgc agcagtaatt tcagccatta ttcttgctcc
     3001 tcaccgaagt cttcttcgct catcgcttca tctaaaactt cttttttctc ttcatcggtg
     3061 atttcttttt cttcatttgc taaagcttcg ccatcttgtt ctcttaaagc ttttccttca
     3121 ttaatcgctt cagccatttc ttggcagaaa agttgcactg aacggattgc atcatcattt
     3181 cctggaatag gataagttac caagtcagga tcgcagtttg tatctagtgg agctacaaca
     3241 ggaattctta atctatttgc ttcttgaaca gcaatttttt cttttactgt gtcaataaca
     3301 aaaatcatat caggttgagt tttcatataa cgaattccac ctaaataagc taataatttt
     3361 tctttttttc ttgtaagcat taaagcttct tttttagtta aaagtttaat acttccatct
     3421 tcttccattt tttcaattac ttctaatttt ctaattgatt ggcgaatggt accaaaattt
     3481 gtcatcatac cgccaagcca tctatgattt acataaggca taccgcattt ttcagcgtat
     3541 tctttaatcg ctccacctgc ttgttttttt gtcccaacaa aaagcatagt ttttccttca
     3601 gcagcagcgt cacgaacgat attataggta tatctaaaat atcttaaagt tttttgtaaa
     3661 tcaattacat aaataccttt tctctcgcca aaaatgaatt ttttcatctt tggattccag
     3721 cgtcttgttt ggtgtccaaa atgcacaccg cattctaata aatctctcat actaaccatg
     3781 agtttctcct tataaattta gctttattcc tccacatccc ttaatttaca caagctaaaa
     3841 aggattgatg tgtgtgaaat gaagctaaga ttttatcaaa tttaagttta gtttttactt
     3901 atatatgtag tccttggtaa gacttagatt attattgatt tcttttgtga ttaaaaattg
     3961 aaacaaatcc acgcttccaa cacgaaaagc agaggcacaa gaacgaaggt acaaatccca
     4021 cattcttata aattcttcat catatttttc ccttaccttg tctaatactt tgttaaaatt
     4081 ttcatcccat aaatctaaag tttttgcata gtgcattctt aaactttctg ctaaaagaag
     4141 atgaaaatcc cactcgctca tagcacttac aacctctctt aaagaaggta aatatcctcc
     4201 tggaaaaata tatttatcta tccaagcatt tgtttttcct tcaaacatgg ctaaaataga
     4261 atgtaaaagc atagaacctc caggttttaa cacttgtttt actttcatga aataaagtcc
     4321 taaattctct ttacctacat gttcaaacat acccacagaa acaactttat caaaataatt
     4381 ttcaaattct aaatcttgat aattttgaag tcttatttct attttatctt caagaccaag
     4441 ttcttttact ctttccttag cttttttaca ctgctcctct gaaatagtaa ttccaacaac
     4501 cttaactcca tacttttgag ccgccataat agaaagccaa ccccagccac aacctatatc
     4561 taaaagcttt tctccttctt ttaaatcaag ttttttaagg gtatgttcta ttttgttaat
     4621 ttgagcttca taaagagtat tattaggctc tttaaaataa gcgcaagaat agctcatagt
     4681 atcatcaagc caaagcttat aaaaatcatt acctatatca taatgacttt taatattttt
     4741 actttcctgt ttttgggcta ttttactcaa gatatcctct gtatttttta aaaaacgctt
     4801 atttgaaaaa taatacaaaa ctttagctat ttcatcataa tcaccttcta tttctagttt
     4861 agactccata taatgttttg caaaaactaa actcgtatca ctaaataatt ttaaaaaagg
     4921 tattttttct ttgaaaatta aagaaaattt agcagactga ttacccacat gaaattcttc
     4981 ttgatcccaa aatacaattc taaaatttcc ataattccat tttgaaagaa taaatttaat
     5041 catttgtttt tcaagcatga catactccaa ttaataataa ttattattag atagtatctc
     5101 ttaattaggt ttaaaaatta ataaaaatga agaaaaaata agatttttgc cattatcact
     5161 aaataatggc aaaaaatgta atattaatgt aatttagacc aaacagaacg cttccaacct
     5221 atagcaaaaa tacttaaaat tacaaagaat atcattacat aaattcctgt agtttttctt
     5281 tcttctttct tgctatcacc cacttgatca atataagata caaccttagc ctgtgcagct
     5341 tctgttaaac ctactcttgg catagcggtt cctggaagaa gtttttgagt gttattaata
     5401 aaatcatgta aatattgctc accacgagat cttatcatca tagaaagatc aggcggaaca
     5461 gaacctaaat aagtttttaa atcattttga tttgatggag taaaaaagct atcgtatttc
     5521 atatcatgac aacgtccgca agcctcaata aaagttgctt tatctttagc aaattttata
     5581 tctttttcca ttaaagccac tttttgagca ctattttcca ttttagcata ttttgcctca
     5641 acatctttct taatagtagc atcttcattg gcttcaaatt taacactcac atctttaaga
     5701 taagcaatta cattggctat atttgcattt gtagcttctt cactttctcc tgaagtatct
     5761 ttattgtaag ctgtcataat aaaagcatca ccaaatttat gatctacttt taaagcaagc
     5821 gcaggatgca taatcaaagc agctaaaaat ttttcatcaa aaatagcacc agctgcacta
     5881 agatcaggtg gtattactcc catagaagaa tcagtaatat tagctgttat tccatcttct
     5941 tttacaccat gacatgcaaa acagttattt tcaaaaaatt ctttaccttt ttttgcatca
     6001 cccttagcaa aatcgatctt tgcaacatct gcccaaagtg tttcaacttt gcttaattct
     6061 tcttttgctt tttcaagttc tttgtttgca ctctctattc ttttagcatc tcctgaagct
     6121 tgtgcatctt ttagagctaa ttctttagct tcaactatac cttttgcaaa agtagtatct
     6181 tcaacagaaa aatcaaaatt tgcaggagca acatgaggtt tcatcactga atgagcataa
     6241 ggctctaccc cccaatatac aagcgcagta aaaactacca caactaaaaa tatttttatt
     6301 tctctcattg tttagctcct tttctctcca taatagtaat aaccggtaaa actacaataa
     6361 gtaaaagtaa aaatactata gaagcataaa atcctaccca agcatttaca cctgttggag
     6421 gtaattttcc ataaactgtt aaaacaatta aatcgataag caatatccaa aaccaaatga
     6481 aaaataaagg tctttcatga gccggtttta caacatcact tctatcaagc caaggaagca
     6541 agaagaaaat cacttgagca ataccaaatg cagccaaacc tatatcaaaa gctttaatac
     6601 ctgcaatatc aaagaaaaat cctcttaaaa cttcataact ccataagaaa taccactcag
     6661 gataaatatg agctggtgtt ttaagcgcat tagccggatc aaaattaatt ggatccattg
     6721 caaattcaaa tttaaaacag accaaataaa agaagaaaat cataaaaaag cttatataca
     6781 taaaatcttt tgataaaaat cctggccaaa aaggaatcac tttagaaccc tttgtgtcac
     6841 ctgccatgta tttttcagcc tctaaatcaa agtcaagttc ttcagaaatt tcattattaa
     6901 catgaggaat tcttaaagaa tagaagtgaa atgctataat agcaatgata actataggaa
     6961 gcaagcacac atgaagcata aaaaatcttg ttaaagttgg atcagaaacc gcataatctc
     7021 cacgaatcca aatcacaagc tcagggccaa taaatggtat ccctccaaaa agattagtga
     7081 ttacttgagc tgcccaataa ctcatttgtc cccaaggaag catataccca ctaaaagctt
     7141 cagcagaaaa tacaacaaac aaaagcatac cgctaaccca aatcatctca cgaccttttt
     7201 tataagaacc gtaataaatt cctgttagca tatgtatgta tataatcaaa aatacaacag
     7261 aagcggcaac accatgcatg tgacgccaaa gccatccata atccacctct tgcataatag
     7321 tcttattcac actatcaaaa gcaagcgcag tatctggttt ataatacatc acaagtaaaa
     7381 gtcctgtaat aaaaagcact gcaaatagag tggttaaaat aacccccatt gcccaaagaa
     7441 agttaatttg ctttggtatc caatacttta ccattaaaac atcaagcagt ttatgtactg
     7501 caagtctttg atcaagccaa tctacaaggc cattagcttt tctaatttgt gccatcttaa
     7561 gcctccgcta tcattttttt atattcagga ccctcttcac ctaaaacaag tttggttcca
     7621 tcaatcttaa aaggaggaat ttcaagaggc tttggaggag gtccaaagac attttttcca
     7681 cttgtgtcaa attctccacc atgacaggca catttaaaca attgctcact tggttggtaa
     7741 gcaggtatac aacccaaatg cgtacaaagt cctataacca cagtataagc tgcgttatct
     7801 accacaacat cacgtttttc atcttttggc atactcgcat ctttttttaa tataaaaata
     7861 ggctttttac gccattctat agttctaagc tctccatctt gcattcctga taaatctact
     7921 gtagtaaaac ctgcagcttt gacacttgga agcggatccc aagttttttt catcgcaaca
     7981 agcgagaaaa caccgcctac agcagctacg cttccaaatg caaagcccat aaagcttcgt
     8041 ctactctcag atgtagccat aacttgtcct ttcgatttta ttttttaacc aagttaaaag
     8101 tttatcgaaa ttaaaataaa ttttttcttt gtttaacaag ttttgatatt tagacaataa
     8161 gagcaaaaag agaaaaaaca agcacaggta aagttatcaa aaagccaaat ttacaatatt
     8221 gccaaaaaga aatattaatg ccttttctag ccaaaactcc aagccaaagc aaagttgcca
     8281 aagaacctat tggggtaagt tttgggccta tatttactcc taaaagatgc gcataaatca
     8341 tcaaagaatc aaaagaaaaa ttctcaaaat attcttttaa tgccaaatct ccgattaaaa
     8401 ccataggcaa attattaaac acagaagatc caaaagccga aatcaaagcc actccaaaaa
     8461 ttccactctt atcttgcatc aaaaaagtat aacttttaac caaaatttca ctcacaccta
     8521 ttttatgtaa agcaaaaact accatataaa gcccaaaact aaaaagcaaa actccataag
     8581 gtgcttcaaa aagaatttta atactttttt taccttgaat ttttaaaaca ataagccaaa
     8641 aaattcccgc ccaaagcaaa gcaaaaaaac ttattttaat atcaaaaatt tcacctataa
     8701 aaaaactgat cacaaaaaga aataaaaata ctatgcaaag aaaaaacaac ttcgatgaaa
     8761 tttgctcttt tttgactaat ttaaattcaa gccttttagg caaaactctc acataaagca
     8821 caaaaaccat aactatagta gaaagtaaaa caaaaaaatt gggcaaaaac atatttttag
     8881 caaattctaa aaattctatc ttaaaataat ttgctgtaat gatattggtt aaatttgaaa
     8941 taaccaaagc atttgaactt gcatcacata aaaaagaaag actaagtaaa aaagaactta
     9001 aaataaaagc atgattttta caatctttaa gagttgaaaa taaagctata ataataggtg
     9061 taatgattaa aatcgctcca tcgttagcaa aaaatgcaga aagaaaaaag acaaaaatca
     9121 acaaaaataa catcaatttt tttgtgctga tataaatttt ttcttgattt ttctctctag
     9181 aaaaatgcaa aattttactc gcaataaaat caaaaaatcc caaagcttcc aagctaaaag
     9241 aaagaataat caacccaact aaagttaaag aactatccca aaccaaagaa aaaacaaaat
     9301 aagcgtcttt aaaatctacc aattgaaaaa taaaaacaaa aaaagccccc aaactagaaa
     9361 atacccaaat aggtaaattc catggacgcc aaaaaagtaa aactaaagta gataaaaaaa
     9421 taaaaaaagc aagcatttaa gcttttttct tttgcatttt gatataaatt tgtaaaatat
     9481 ctaacgctgc aggagtaatt ccactgattt gacttgcagc aaaaatggtt ggaggtttat
     9541 gatgattaag cttttctaca acctcattac tcaaaccact tacactttta aaatcaaaat
     9601 tttcaggaat tttaagctca ctaagatttt tcattttttc tacttgagct ttttgcatgc
     9661 tgatataatg ataatacttt gcctcgttta aaatttctct taaagaataa ttatccatag
     9721 tttcaaacat aggatcaagt ttttttaatt tttctatatc aaaacttgct cttgcaacaa
     9781 ttttttgaag attgactata gaagaaattt tatcttctcc taaactctct aaaaaagcat
     9841 tattttggtt attaggcgta aattctttag aaagtaaaaa ttcaagtcct ttttgaagat
     9901 tgtttgcaat attttgtata taagtaaaat cttgctcgct taaaagcccc aaatcatagc
     9961 catattttcc aagtctaagt atagcatttt cttcccttaa aagcagtcta aattctgctc
    10021 ttgaagtaaa cattctataa ggttcttttg taccttttac taccaaatca tcgattaaaa
    10081 ctcctatata agcttcatca cgccttaaaa tcaaaggctc tttcatatct atacttaaac
    10141 ttgcattgat tcctgccata aagccttgtg ctgcagcctc ttcataacct gtagttccat
    10201 taatctgtcc tgcacaataa agatttttaa tctttttaag ttctaaagta tgcttaagtt
    10261 cagttggctc tatataatca tattctatag cataaccaaa acgggttatt ttagcatctt
    10321 caaaaccctt tacagaacgc agcatttgaa tttgtacctc ataaggcaaa gaagtagaaa
    10381 aaccgttgat ataatactct gtcgcatcga tagtttgagg ttctataaaa agatgatgac
    10441 tttctttgtc gctaaaacgg ttgattttat cttctataga aggacaatac cttggcccta
    10501 caccttcaat ctgtcctgta aaaagtggag cacgataaaa attattctta ataatctcat
    10561 gtgtagttgt attagtgcgt gcgatataac aaggaagttg agtaggattg aaattttttg
    10621 aacgaaaact aaaagcttta ggatttacat caccatcttg aatttcaagc acgctaaaat
    10681 caatgctttt tgcatccact cttgggcaag ttcctgtttt taaacgcccc attttcaaac
    10741 ccaaagtttg tagataattt cctaaattta ccgaagcaag ctcccctacc cttcctgctt
    10801 gaagtttatt ttcacctaca tgaataagtc catttaaaaa agttcctgtt gttaggatca
    10861 cttttttggc aaaatatgta ttttctaaat ttgtttttac gcctttaact tcatcatttt
    10921 ctacgattaa aacactcgct tgttcttgag agatttctaa atttggaagt tttaaaagtt
    10981 tattacgtgc aatgatacgg tatttatcca tatcaatttg tgccctactt ccttgaacgg
    11041 ctacaccctt actctcattt aaaatgcgaa attgtatccc tgcttcatcg gtgatttcgc
    11101 ccataagacc acccatggca tcaagttctt ttaccaaatg ccctttagca agccctccta
    11161 tagccggatt acaacttgcc gctcctattt gctcaatcaa tgtagttaaa agtaaagttt
    11221 ttttacccat tctagcagca gcagcacttg cttcaacacc tgcatgtcca ccacctataa
    11281 caatgacatc aaacatattt tgccttgaaa aatgtgaatt ttaaagaaag attatataat
    11341 atttagactt aaaacaaact cgttttaagt ctaacaaaaa tttatttagc ttcttgaaga
    11401 gagaagatta gctcattata agttttatct gcatctttac agaaattttt aagcatctca
    11461 acacccttat ttaaaccttg ttgctgttct actcttaaaa gatcactata aaggctttct
    11521 attgtagaaa tagcgctttt atttggcata cgacgaacgg aataatagcc tatgatatta
    11581 ttattaatgt ctattgatgg agttacattt gcaaaaaccc agtagtaatt gttatctttg
    11641 gttttgtttt ttacgtaagc aaaaatttct ttgccttctt tcatataatc ccataaatat
    11701 ttaaaaacag tttttggcat ttcttcatgt cttactatgt tatgaggttt atttaaaact
    11761 tcacccatag tataacctgc atactttaaa aaatcatcat ttgcataaac tattttacct
    11821 tttaaatccg ttttagaagt aattaaacta tcttcttgta aaaaaatttc tcttgacatt
    11881 ttcccaccct cttaatttat atttttaatt ttgctaagat ttcagcactt ctttgctcta
    11941 gtgatttaat atcatttaca atcgcatcat aagctttttg atcgatataa tcttgacttg
    12001 attcttctat tgctttttta gcgttatctt ttataaattc tttagctaaa tttaactcag
    12061 tttcagaact aagctcatta ataacacctt gagctctctc atcttgacaa agattagaaa
    12121 ttggatctac actttcaaga ttgaaatttt gagccccatt taaatttaaa tatatatttg
    12181 atttataaag aatatgatcg attttaacca cagacaaaat caatctcttt gcaaaggatc
    12241 caaaattaac accaagagca ctactatttt cttctagacg tttaaaagct tgagaaaatt
    12301 tattaattct ttcttcagat tcactaacaa tgttaaaaac ttgctcactg ccactttgga
    12361 tatttacaaa atcttgttgc atagtctgaa ttgcaataga aatttcgctt gtagatcttt
    12421 gagttctttc tgctaacttt ctaacttcat cagccacaac cgcaaagccc ctaccatgct
    12481 ctcctgcacg cgcagcttca atagcagcat ttaaagctag aagattggtt tgatcggcta
    12541 tatcgcgtat tacttcaacc actgaagtga tattttgtga attagccaca aaagtttgta
    12601 ctgtctcctt gctcgaattt acaacatcca ttaaagaacc catagcactt tgcaaagaat
    12661 ccacctctga accattttct gtagctgtat gagaaatggc atccactgta tcatatacat
    12721 ttttcatcat gctaatatct tgatttaatg agctagaaat ttgagacatg tctttatttt
    12781 gatttccaag gcttaaatcc attaaagttc ttgataaagc atttttaaaa gtagatcttg
    12841 ctgtcacttc tatgtttgct aaagctttat ttataaattc gatattatga gcaaaaattc
    12901 cttttaaacc ttcaggcaaa gccttgcgat aaaattcacc tttttgagaa caagaaatag
    12961 aagtattaat ttcccttaag taagcttcta gcccatcaat agtattgtta agattatctg
    13021 ctatttcggc taattttttg ctttttgttt ttacatagat aattctattg tcaaaatttc
    13081 cttcttttaa ctctctacaa agaaccaaaa gtttatctat cattatttgc tcatctttgt
    13141 gttgtctaag caaataaatc attaaaacag cgattaaaac aaaaattatc gctccaacaa
    13201 aaatatgaat aaaaatgaca cctaaaacac cgataatact tagaaaaata gttaataata
    13261 atccattttt caccataaat ttaccccttt tattgaaaat tttttgaaat cataaatcaa
    13321 aacaatactt taacaatata ttactttaat ttctaggtga
//
LOCUS       DAPWGO010000042        13073 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.043, whole genome shotgun sequence.
ACCESSION   DAPWGO010000042 DAPWGO010000000
VERSION     DAPWGO010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13073)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13073)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13073
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.043"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            61..1335
                     /gene="cmeD"
                     /locus_tag="RJ336_001068"
     CDS             61..1335
                     /gene="cmeD"
                     /locus_tag="RJ336_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter outer membrane
                     subunit CmeD"
                     /protein_id="HDZ5213519.1"
                     /translation="MFEKYLKSAMFLALYPLAMLASNLQEFIALSQNNESYLIKQMQS
                     EQANLDKEQAFRNYLPSLSLNSAYVANNKDRFIIDPQESLFAKVSLNFLLFDGGAREA
                     NLRALESKEKLSLLDKEQSKNYLALNAITLYFNTLSLEKILLANQQKVAFLKSTFERL
                     QKFYDAGLSPKDELESIKAKYHLSLLELSQNELKLANIQKEIKILSNTDFKVQGNAFL
                     ENPQQEKSQNYEVMIAKEQINLAKESVNLAKAEYFPKFYIQDNFNFYKNNYNPKVPAP
                     FVNLADQFLEKYSQGNQFILGMEWKIFDFNARAKEVEKERLNVQIANANARFSERKNK
                     EELNYLDKSLKVLQEQILALNLSLNAANLAFESVDKKYQAGLVSYVEYLQALEAKFKA
                     QSDLELAKNEFEITKANYYFNAGIDLNSKVKE"
     gene            1332..2072
                     /gene="cmeE"
                     /locus_tag="RJ336_001069"
     CDS             1332..2072
                     /gene="cmeE"
                     /locus_tag="RJ336_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeE"
                     /protein_id="HDZ5213520.1"
                     /translation="MKKILFLLLAFNCAFGEEIYASFNVEASKQSKLALESIGLVQKI
                     PVEIGQKVSKGELLLTLDQESEKIALQNAQNSYQLALVEYENTKSKMQKIKAVENVID
                     KQSYEDMKAKFDAANLNLNKAKINIAYYKNIMTKKELRAPYDAIIANKFIQVGEGVGG
                     VAQPLIEIFSYPQSKLILSFDEKYKDKVKLGDDFFYKIDQNGTELKGKISLIYPSIEV
                     KTRKIYAEVQTTNLTPGLFGEGRIITKD"
     gene            2075..5092
                     /gene="cmeF"
                     /locus_tag="RJ336_001070"
     CDS             2075..5092
                     /gene="cmeF"
                     /locus_tag="RJ336_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeF"
                     /protein_id="HDZ5213521.1"
                     /translation="MFKLAINRPITVLMFFLALMIFGLISAFSMSVNLFPNVSIPLIK
                     ITSKVNGDLNFVESKVTKEIENALSEIDGVKTITSAAYDNFSVSVVEFKLGKNLEVAA
                     NDVRDKIGTLSLPSKPEIEKISSDSGSAISLFLYSKDKLQLMREINDKIKPFLQRVEG
                     VGKIEAKGFLEPQIRIELKPNELRKYNLNALDVANIIKSQNFKQALGELNNNQDNYII
                     KGYFEATNLEELSNLRIKTGVFLSDIANISSLYEDEKQSALYEGKEGVLLELGKITNY
                     NTLEMIKNVKNALPILEKQIPKDISINMLYDKSLNIHKHLSQVIFDMVLGIFLTLVIV
                     FLFLRNLSATLIACIAIPTSIISTFFIIDLLGYDLNRLTFIALTLSIGIFIDDAIVVI
                     ENIAKKLKTYPPLQAAFLGINEIGFSVLSISIVLLCVFIPISYMNSISGLFFNALGIS
                     VASGIVISFLVSVFLIPSIGARFLNPKENKFYEKTEAFFEKIEQKYENLLYKILQNKV
                     KFILATLVFIGLSFALATRIGLDFLPMEDDSEIQVLLESKKDLSLEAMKEKSLNLLEK
                     IKNDSNVKYAFLLVGYDDAKDATKAKIYVKLKNLDERNLRQSAIVSLYRQKFQDESLK
                     IKILELPKIEGAGIDDPVQFLILGDDLNTLKEAASQAKEILGTNARIVDISDNANATK
                     DEVALHINKEKAKLLDVNPQYIAGVLGYSFSQLSVGSMDRGNSKDDIILSFAPEFKKD
                     IEALKRISIKNNQGINLELSSVVDFIYSKDLKTINRYNKNRSVKITAGVNDLSLGAVQ
                     KLLLDNMDKILNNNPSLSYAFSGFINLLGETVQGFAMAVALAFVLIYLVLAALYESFI
                     LPLIIMITMPLAFGGASIGLFITGHNFSLFVLIAIILLFGMVGKNAILLVDVANKKCH
                     EGLDPDKALLIAGKSRLRAILMTTFAMIFAMLPLALSRGAGYEANSPMAIAIIFGLIS
                     STLLTLLVVPALFKFCFKLDSKLRKIYEREKLN"
     gene            complement(5117..5923)
                     /locus_tag="RJ336_001071"
     CDS             complement(5117..5923)
                     /locus_tag="RJ336_001071"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDZ5213522.1"
                     /translation="MQIVQTLETINVNTDDISVFQYFKDLITKNFTKVIGRKNKIFSF
                     FEENEIPQRRYFLKVLDQKYRKSTNEGIENLQDAHFKTFRLIFEQNNMLKPMLFIKID
                     FVAGRILMKLSSNEKLFITYIRNYFQDHYIEYNEMTNILILEYKNENTLELFEAFADE
                     SEHLKYCVNFEVDREEYKKFRQNIHNKENMKWKFNALAKLFSNYFNTLECTPQNDLSE
                     IRQKYLILVKLYHPDFHQGKSAIEKAYAREQFEKIQIAYDNLKALYKNNT"
     gene            complement(5924..6643)
                     /locus_tag="RJ336_001072"
     CDS             complement(5924..6643)
                     /locus_tag="RJ336_001072"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HDZ5213523.1"
                     /translation="MLEIGFCTLEDQCPYLKDKRSRIEYKYIENCSKEINNELIKRGW
                     RRFGRYFSRPICKDCDECLSLRILVNEYNFSRSERRVINKNINTKVILRTPNLSNEHL
                     FLYDKYHRFMEEKKNWKRYDLSFKQYYNLYVDGFMNFGYELAFYIEDKLVCVDLIDIL
                     EDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKKMNLDYIYLGYFVKKCQSLSYKADY
                     TPNEILKGTKELFENEVLWEK"
     gene            complement(6643..6894)
                     /locus_tag="RJ336_001073"
     CDS             complement(6643..6894)
                     /locus_tag="RJ336_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213524.1"
                     /translation="MDFLDSLKSIKKEMQANTNTSKLAKKSSKSGASVKNLEKLAKDI
                     REKNQETNIDKEMQEIFLKQEKLQDEFSEFIKNTDIKKI"
     gene            complement(6898..8343)
                     /locus_tag="RJ336_001074"
     CDS             complement(6898..8343)
                     /locus_tag="RJ336_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase subunit A"
                     /protein_id="HDZ5213525.1"
                     /translation="MNQIHKILIANRAEIAVRVIRACRDLHIKSVAVFTEPDRECLHV
                     KIADEAYRIGTDAIRGYLDVARIVEIAKACGADAIHPGYGFLSENYEFAKACEDAGII
                     FIGPKSEVIHKMGNKNIARKLMAKNGIPIVPGTEKLNSYSMEEIKIFAEKIGYPVILK
                     ASGGGGGRGIRVVHKEQDLENAFESCKREALTYFNNDEVFMEKYVVNPRHIEFQILGD
                     NYGNIIHLCERDCSIQRRHQKVIEIAPCPGISDNLRKTMGVTAVAAAKAVGYTNAGTI
                     EFLLDDYNRFYFMEMNTRIQVEHPITEEITGIDLIVRQIRIAAGEILDLEQSDIKPRG
                     FAIEARITAENVWKNFIPSPGKIGEYYPALGPSVRVDSHIYKDYTVPPYYDSMLAKLI
                     IKATSYDLAVNKLERALKEFVIDDIRTTIPFLIAITKTREFRRGYLDTSFIETHMQEL
                     LEKTEDRHQENKEEVIAAIAATLKKIRESRE"
     gene            8483..9646
                     /gene="ftsW"
                     /locus_tag="RJ336_001075"
     CDS             8483..9646
                     /gene="ftsW"
                     /locus_tag="RJ336_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HDZ5213526.1"
                     /translation="MVADKRLFYLSCILITIGIVFSYSLTAFTVLFLDYSEFHFFIRQ
                     LFFGISGILIMFFISRLDPDKALSKKIILAILIISFIFIIILPFLPSVLATASGGAKR
                     WIRLGPLSISPVEFFKIGLIYFLAWSYTRRIDDSKKAIRHEALILLPYCILASIVIGY
                     IYITQNDLGQSVISFFLILALAFFAGASKRLFAFGTLIIMMIGIMVIFSNQRRIQRIA
                     SWWGNIQDAFLPMLPDWLANALRVSSNSEPYQISHSLNAIAHGGMFGEGLGLGTFKLG
                     FLSEVHTDFVLSGITEEIGLLGLGVICYIYLWMILRIFRIAGRCEAKQDFIFCSGIAL
                     LLLFSFFMNAFGIISLTPLKGVAVPLLSYGGSSMWAICIGIGYVLMISKKVKL"
     gene            9643..10671
                     /gene="murG"
                     /locus_tag="RJ336_001076"
     CDS             9643..10671
                     /gene="murG"
                     /locus_tag="RJ336_001076"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDZ5213527.1"
                     /translation="MTIALTGGGTGGHLAIVRCLLESAIKKNIECVYIGSQNGQDKAW
                     FENEVRFKEKFFLSSKGVVNQSKFGKISSLLHTLKLSKDCREIFKKYHIQAVFSVGGY
                     SAAPASFAALFSHLPLFIHEQNSKSGSLNMLLKPFATKFFSAFEKEISPYPVADKFFD
                     NARIRKELKNIIFLGGSQGAQFINELALNLAPKLQEQNIKIIHQCGKNDFEKCKKHYQ
                     SLNIQADIFDFSLNLEEKMKNADLAISRAGASTLFELCANTLPTIFIPYPYAAKNHQY
                     FNAKFLQDQALCQIFMQNSINLDEFFKSILKLNLENISTRLQNITQKNGADMLIQKAL
                     FDNLTFIR"
     gene            complement(10642..11805)
                     /locus_tag="RJ336_001077"
     CDS             complement(10642..11805)
                     /locus_tag="RJ336_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CynX/NimT family MFS transporter"
                     /protein_id="HDZ5213528.1"
                     /translation="MASFKKIFWINVIIVIIVAFNLRAPITAVGPIIDIIKDKYYLNS
                     TVAGILTSLPLIAFGSISFIVGYFSPIRAIVFGIFLIFLGEIIRSYFGVYGLFLGMLA
                     MGCGIAIANVLLPSFIKEKFPKKMASIMGIYSLVLSISSIMGIALAIPLLSVFDLAGA
                     MFFWAIFSFIALVVYYPQAKNGRFFRIKKKAHKKINLFTNLTTWKITLFMGFQSFLAY
                     SLFFWYVQIVVEKGFDKEFSTSMVLFAQLVAAPVSLFGPLLLGKLRQNLHTFYIAGLC
                     SMYVIAFGILFIFDSKISIIISAFIMGFPWGGVFGIALLFIAQKSSNAQIAARLSALA
                     QGFGYLIAAQGQWIIGFLHDKFENFSFAILMLVFVGILVNIFGYLSYKSQIIK"
     gene            complement(11813..12664)
                     /locus_tag="RJ336_001078"
     CDS             complement(11813..12664)
                     /locus_tag="RJ336_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ5213529.1"
                     /translation="MKKYVLSLALLGSLLGASELKYQEFDGFKNPESIFVDKNYVYVS
                     NVGEKLEPLAKDNDGFISKLDKNGKVLEYKFLTHLNAPKGMMEIGKTLYVVDIDVLRG
                     FDLKTKKEIFNLPIKGAIFLNDIEKLDDNTLLVSDTGTGLILKVDLKTKQYDELLKLD
                     LAKFGGPNGLYLDRKKHKLFIAGYHPDGVSGGVVMAYDLNTKELSIIKNEKESYDGIV
                     PYKDGLLVSSWGNNLNGYIYNLDNVKSVKLELPLMKGPADIFIEGNILWIPKMAEGKI
                     FKVELNK"
     gene            complement(12727..>13073)
                     /locus_tag="RJ336_001079"
     CDS             complement(12727..>13073)
                     /locus_tag="RJ336_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDZ5213530.1"
                     /translation="ILKEFRLDLSQLFEYCGREFLSVNEMSNFAKLDLATFSKEFKKC
                     FGQNPKKWLDEKRLQKAKILLKFSKKNINEIANECAFSSVAWFIERFKEKYEQTPKQY
                     QKTKNLYFLSKN"
BASE COUNT         4644 a         2071 c         1827 g         4531 t
ORIGIN      
        1 aattttattt tatataaaaa acttcaattg aaatttatat aaagcatact aaaatatcaa
       61 atgtttgaaa aatatttaaa atcagctatg tttttagctc tttatccctt agcaatgtta
      121 gcttctaatt tgcaagaatt tatagcacta agtcaaaata atgagtccta tctcattaaa
      181 caaatgcaaa gcgaacaagc aaatttggac aaagaacaag cttttagaaa ttatctaccc
      241 tctcttagtc taaactcagc ttatgtagcc aacaataaag atcgcttcat tatcgatcca
      301 caagaaagtt tatttgctaa agtttctctt aattttttgc tttttgatgg gggtgctaga
      361 gaggccaatt taagggcttt agaaagcaaa gaaaaattaa gccttttaga caaagaacaa
      421 agcaaaaatt accttgcctt aaatgcaatc acactttatt ttaacaccct aagtcttgaa
      481 aaaattttac tagccaatca acaaaaagta gcttttttaa aatcaacttt tgaaagattg
      541 caaaaatttt acgatgcagg acttagccct aaagatgaac ttgaaagcat taaagccaaa
      601 tatcatttaa gcttattaga gctcagtcaa aatgaattaa aacttgccaa tatacaaaaa
      661 gagattaaaa ttttaagcaa tacagatttt aaagtgcaag ggaatgcttt tttagaaaat
      721 ccgcaacaag aaaaaagtca aaactatgaa gtaatgatag ctaaagaaca aatcaatctt
      781 gctaaagaaa gtgtaaattt agcaaaagct gaatattttc caaaatttta tattcaagat
      841 aattttaact tttataaaaa caattataat ccaaaagttc cagctccttt tgtaaactta
      901 gcagatcaat tcttagaaaa atattctcaa ggtaatcagt ttattttagg tatggaatgg
      961 aaaatttttg atttcaatgc aagggctaaa gaagttgaaa aagagcgttt aaacgttcaa
     1021 atagccaatg caaacgcaag atttagtgag agaaaaaata aagaagaatt aaattattta
     1081 gacaaaagtt taaaagtttt acaagaacaa attttagctc ttaatcttag cttaaatgct
     1141 gcaaatttgg cttttgaaag tgtagataaa aaataccaag caggacttgt ttcttatgtg
     1201 gaatatcttc aagctttaga ggctaaattt aaagcacaaa gcgatttaga gcttgctaaa
     1261 aatgaatttg aaattactaa agcaaattat tattttaatg cgggtataga tcttaattca
     1321 aaggttaaag aatgaaaaaa attctatttt tacttcttgc ttttaattgc gcctttggcg
     1381 aagaaattta cgcaagtttc aatgtagaag catcaaaaca aagcaaactt gcccttgaaa
     1441 gcataggttt agttcaaaaa attcctgtag aaattggaca aaaagtcagc aaaggagaac
     1501 ttttacttac tcttgatcaa gaaagtgaaa aaatagctct tcaaaatgct caaaattctt
     1561 atcaacttgc ccttgtagaa tatgaaaata ccaaaagcaa aatgcaaaaa atcaaagctg
     1621 tagaaaatgt tatagacaaa caaagctatg aagatatgaa agctaagttt gatgctgcta
     1681 atttaaattt aaacaaagca aaaatcaata tagcttatta taaaaatatc atgacaaaaa
     1741 aagaattgcg cgcaccttat gatgctatca tcgcaaataa atttatacaa gttggcgaag
     1801 gagtaggagg agtagctcaa cctttgatag aaattttttc ctatccacaa agcaaactga
     1861 ttttaagttt tgatgaaaaa tacaaagata aagttaaatt aggcgatgat ttcttttata
     1921 aaatcgatca aaatggtaca gaattgaaag gaaaaatcag tcttatttat ccaagcatag
     1981 aagtaaaaac aagaaaaatt tatgctgaag tgcaaactac aaatctaaca cctgggcttt
     2041 ttggcgaagg tagaatcatc actaaagatt aaaaatgttt aaactagcta taaaccgacc
     2101 aattactgtg ctaatgtttt tcttagctct tatgattttt gggctaatct ctgcttttag
     2161 catgagtgta aatttatttc ctaatgtttc catacctctt ataaagatta caagcaaggt
     2221 aaatggagat ttaaatttcg tagaatcaaa agtcaccaaa gaaatagaaa atgctctaag
     2281 tgagattgat ggagtaaaga ccataacctc agctgcgtat gataatttta gtgtgagtgt
     2341 agtcgagttt aaactaggta aaaatcttga agtagctgct aatgatgtgc gtgataaaat
     2401 aggaacttta agcctacctt ctaagcctga aattgaaaaa atcagttcag attctggttc
     2461 tgctatttcg ctttttttat attctaaaga taaattacaa ctcatgcgtg aaatcaatga
     2521 caaaataaag ccttttttgc aaagagttga aggggtaggt aaaatcgaag ctaaggggtt
     2581 tttagaaccc caaattcgca tagaattaaa accaaatgaa cttagaaaat acaatcttaa
     2641 cgcccttgat gtagcaaata ttatcaaaag tcaaaatttt aaacaagccc ttggcgaact
     2701 taataacaat caagataact atatcattaa aggctatttt gaagccacaa atttagaaga
     2761 acttagtaat cttcgcataa aaacaggagt atttttaagt gatattgcta atatttcaag
     2821 cctttatgaa gatgaaaaac aaagtgcttt atacgaaggt aaagaagggg tgcttttaga
     2881 actcggaaaa atcacaaatt ataacaccct tgaaatgatt aaaaatgtca aaaatgcctt
     2941 gcctatttta gaaaaacaaa ttccaaaaga tataagcatt aatatgcttt atgataaaag
     3001 cttaaatatc cacaagcacc tttctcaagt gatttttgat atggttttgg ggatttttct
     3061 aacccttgtt atcgtgtttt tatttttaag aaatttaagt gcaactctca ttgcttgcat
     3121 agctatacct acttctatca tttcaacttt ttttattatc gatcttttag gctatgattt
     3181 aaaccgctta acttttatag ctttaacctt aagcatagga atttttatcg atgatgctat
     3241 agtagtgatt gaaaatattg ctaaaaaact aaaaacttat ccgcctttac aagctgcttt
     3301 tttaggtatc aatgaaatag gttttagtgt tttaagcata agtatagttt tactttgtgt
     3361 ttttatccct atttcttata tgaactctat atcagggctt tttttcaatg ccttaggcat
     3421 aagcgttgca agtgggatag ttataagctt tttggtttct gtatttttaa tacctagtat
     3481 tggggcaaga tttttaaatc caaaagaaaa caagttttat gaaaaaacag aagctttttt
     3541 tgaaaaaata gagcaaaagt atgaaaattt actctataaa attttacaaa ataaagtaaa
     3601 atttatccta gccactcttg tttttatagg gctttctttt gctttagcca ctcgcatagg
     3661 gcttgatttt ttacctatgg aagatgatag tgaaattcaa gttttgcttg aaagcaaaaa
     3721 ggatttaagt ttagaagcca tgaaagaaaa aagtttaaat ttacttgaaa aaatcaaaaa
     3781 tgatagcaat gtcaaatacg cttttttact tgtaggctat gatgatgcca aagatgctac
     3841 aaaggctaaa atttatgtta aacttaaaaa tttagacgaa agaaatttaa gacaaagtgc
     3901 catagtaagt ttatatcgtc aaaaatttca agatgaaagt ttaaaaatca aaattttaga
     3961 acttccaaag atagagggtg caggtattga tgatcccgtg caatttttaa tcttaggaga
     4021 tgatttaaac actctaaaag aagctgcttc tcaggcaaaa gaaattttag gcactaatgc
     4081 acgcattgta gatataagtg ataatgctaa tgctacaaaa gatgaagtag ccttacacat
     4141 caacaaagaa aaagccaaac ttttagatgt caatcctcaa tatatcgctg gggttttagg
     4201 gtattctttc tcgcaactta gcgtaggaag catggataga ggcaattcaa aagatgatat
     4261 tatcctaagt tttgctccag aatttaaaaa agacatagaa gctttaaagc gcattagcat
     4321 taaaaacaac caaggtataa atttagaact ttcaagcgtg gtggatttta tatacagtaa
     4381 agatttaaaa actatcaatc gttacaataa aaaccgctct gtgaaaatca cagctggagt
     4441 gaatgatctt tccttaggag cggtgcaaaa acttttacta gataatatgg ataaaatttt
     4501 aaataacaat ccaagtctta gctatgcttt ttcaggcttt atcaatcttt taggtgaaac
     4561 cgtgcaaggt tttgctatgg cagtagcact tgcttttgtt ttaatttatc ttgttttagc
     4621 cgcactttat gaaagtttta ttctgccttt aatcatcatg ataaccatgc ctttagcctt
     4681 tggcggagct tctatagggc tttttatcac agggcataat ttttcacttt ttgtacttat
     4741 tgccatcatc ttactttttg gtatggtggg gaaaaatgct attttactcg tagatgtagc
     4801 taataaaaaa tgccatgaag gtttagatcc cgataaagct cttttaatcg ctggaaaatc
     4861 gcgcttaagg gctatattga tgacaacttt tgctatgatt tttgctatgc tcccacttgc
     4921 tctttcaagg ggtgcgggct atgaagctaa ttctcctatg gcaatagcca ttatctttgg
     4981 acttataagt tcgactttgc ttaccttact cgtagtacct gcacttttta aattctgttt
     5041 taaactagat agcaaattaa gaaaaattta tgagagagaa aaattaaatt aaccaaaatg
     5101 attaatttaa ttttttttaa gtattattct tataaagtgc ttttaagtta tcataggcaa
     5161 tttgtatttt ttcaaactgt tctcttgcgt aagctttttc tattgcactt tttccttgat
     5221 gaaaatcagg atgataaagt tttaccaaaa tcaaatattt ttgtctgatt tcactaagat
     5281 cattttgcgg agtgcattct aaagtattaa aataattact aaaaagctta gctaaagcat
     5341 taaatttcca tttcatattt tctttattgt gaatattttg gcgaaatttt ttatactctt
     5401 cgcggtcaac ttcaaaattc acgcaatatt ttaaatgctc gctctcatct gcaaaagctt
     5461 caaaaagttc aagggtattc tcgtttttat attctaaaat tagaatattt gtcatttcat
     5521 tatattctat ataatgatct tgaaaataat ttcttatata agtaataaat aatttttcat
     5581 tagagcttaa cttcatcaaa attctacccg caacaaaatc aatcttgata aacaacatag
     5641 gcttaagcat attattttgc tcaaaaatta atctaaaagt tttaaaatga gcatcttgta
     5701 aattctctat accttcattt gtgcttttgc gatatttttg atctaaaact tttaagaaat
     5761 aacggcgctg tggaatttca ttttcttcaa aaaaagaaaa aattttattt tttcgtccta
     5821 tgacctttgt gaaatttttg gtaatcaagt ctttaaaata ctgaaatacg ctaatatcat
     5881 ctgtattaac attgatagtt tctaaagttt gcacgatttg catctatttc tcccataaaa
     5941 cctcattttc aaaaagctct ttagtgcctt ttaaaatttc attgggtgta taatcggctt
     6001 tataagataa agattgacac ttttttacaa aatacccaag ataaatataa tctaagttca
     6061 tttttttagc tatttgtatt tcattgagca aagaaaattt acccaaagaa aaatacgaaa
     6121 aatcaggatc ataaaaacaa taaatgcttg aaattccatc ctctaaaata tcaatcaaat
     6181 caacgcaaac gagcttatct tctatataaa atgcaagctc atatccaaaa ttcataaaac
     6241 catcaacata aagattataa tactgtttaa agcttaaatc ataacgcttc cagttctttt
     6301 tttcttccat aaaacgatgg tatttatcat ataaaaacaa atgttcattg cttaaattgg
     6361 gtgttctaag tataactttg gtgttaatat ttttatttat aacccttctt tcacttcttg
     6421 aaaaattata ttcattaact aaaattctaa gacttaaaca ttcatcacaa tctttacaaa
     6481 tagggcgtga aaaataccta ccaaaacgac gccaacctcg ttttattagc tcattattga
     6541 tttctttaga gcaattttca atgtatttat actctattct tgagcgttta tcttttaagt
     6601 aaggacactg atcttcaaga gtacaaaaac caatctcaag cattaaattt tcttaatatc
     6661 tgtatttttg ataaattcgg aaaattcatc ctgtagtttt tcttgcttta agaaaatttc
     6721 ttgcatttcc ttatctatgt ttgtttcttg atttttttcg cgaatatctt tggctagttt
     6781 ttctaaattt tttacacttg ctccactctt gcttgatttc ttcgctaatt ttgaagtatt
     6841 ggtgttagct tgcatttctt ttttaatact tttaagactg tctaaaaaat ccatctatta
     6901 ttccctactt tctcgtattt ttttaagcgt agcagctatt gcagctataa cttcttcttt
     6961 attttcttga tgacgatctt ctgttttttc taataattct tgcatatgtg tctctatgaa
     7021 agaggtgtct aaataccccc ttctaaattc tcttgttttt gtaatggcaa ttaaaaatgg
     7081 tattgttgtt ctaatatcat caatcacaaa ttccttcaaa gcacgctcaa gtttattaac
     7141 cgctaaatca taacttgttg ctttaataat aagctttgca agcatggaat cataataagg
     7201 cggcacagta tagtctttat aaatatgact atcaactcta acagatggtc caagagctgg
     7261 gtagtattct cctatttttc caggacttgg aataaaattt ttccatacat tttcagcagt
     7321 aattctagct tcaatagcaa aacccctagg tttaatatcg ctttgttcta agtccaaaat
     7381 ttctcctgct gcaatacgaa tttgtcttac aataagatca atacctgtaa tttcttcagt
     7441 aattggatgc tcaacttgaa ttcttgtatt catttccata aaataaaagc gattataatc
     7501 atcaagcaaa aactctatag ttccagcatt tgtataacct acagccttag cagctgccac
     7561 agctgtaaca cccatggttt ttctaagatt atctgaaatt ccagggcaag gtgctatctc
     7621 aattaccttt tgatgtcttc tttgaataga acaatccctt tcacaaagat ggataatatt
     7681 tccgtagtta tctcctaaaa tttgaaattc tatatgtctg ggattaacta catatttttc
     7741 cataaatact tcatcattat taaagtatgt taaagcttct cttttgcaag attcaaaggc
     7801 attttcaaga tcttgttctt tatgaacaac gcgaattccg cgtccacctc caccacctga
     7861 agcttttaaa ataacaggat aaccaatctt ctcagcaaaa attttaattt cttccatgct
     7921 ataggaattt aatttttcag tccctggaac aataggtatg ccatttttag ccattaactt
     7981 acgagcgata tttttatttc ccatcttatg gattacttca gattttggac ctataaaaat
     8041 aattccagca tcttcacaag ccttagcaaa ttcgtaattc tcacttaaaa atccataacc
     8101 aggatgaatc gcatcagcac cacaagcctt agcaatctca acaatacgag caacatctaa
     8161 atatcctctt atagcatccg ttcctatgcg ataagcctca tctgcgattt ttacatgcaa
     8221 acattcacga tcaggctctg taaaaactgc aacactttta atatgcaaat ctctacaagc
     8281 acggattact ctaacagcta tttcagctct atttgctatg agaattttat ggatttgatt
     8341 cataatttgc cttttttgtt atatttttat tgttaatttt agcaaatttt ccttacaaaa
     8401 acttagcaaa aaatttaatt tattttagtt ataataaaac tttttaaaat tttaattcca
     8461 ataaagaaaa gttataatta taatggttgc tgataaaaga ttattttatt taagttgtat
     8521 tttaatcacc ataggaatag tattttcata ctctcttaca gcttttactg ttctttttct
     8581 tgactatagc gagtttcatt tttttattcg tcagcttttt tttggaatta gtggcatact
     8641 tataatgttt tttatttctc gattggatcc tgataaagca ctttctaaaa aaattatttt
     8701 agctattttg attatttctt ttatctttat catcattttg ccatttttac cttctgtatt
     8761 agcaacagct agcggaggag ctaaacgctg gatacgctta ggcccactct ctatctctcc
     8821 tgtggaattt tttaaaatag gattgattta ttttttagca tggagctata caaggcgtat
     8881 tgatgatagc aaaaaagcta tcagacacga ggctttaatt cttctgcctt attgtatctt
     8941 agcttctata gttataggat atatttatat cactcaaaac gatttaggac aaagcgtaat
     9001 ttctttcttt ttgattctag ctttagcttt ttttgcagga gctagtaaaa ggctttttgc
     9061 ttttggaact ttaatcatta tgatgatagg tataatggta atttttagca accaaagaag
     9121 aattcaaaga atcgcttctt ggtgggggaa tatacaagat gcttttttac ctatgcttcc
     9181 tgattggctg gcaaatgctt taagagtaag cagcaatagc gagccttatc aaatttcaca
     9241 ctctttaaat gctatagccc atggaggaat gtttggcgaa ggcctaggac ttggaacttt
     9301 taaattaggc tttttaagtg aagtgcatac tgactttgtt ctttcaggaa ttactgaaga
     9361 aataggactc ttaggtcttg gagttatttg ctatatttat ctttggatga ttttaagaat
     9421 ttttagaatt gcaggaagat gtgaagctaa acaagatttt attttctgtt caggtatagc
     9481 tttactttta cttttttctt tctttatgaa tgcttttggt attatttctc ttactccact
     9541 aaaaggtgta gcggttccac ttttaagcta tggaggaagt tcaatgtggg caatttgtat
     9601 aggcatagga tatgtattaa tgatttcaaa aaaggttaaa ttatgacaat agctttaaca
     9661 ggtggtggaa ctggaggaca tttggccata gtgcgttgct tattagaaag tgcgattaaa
     9721 aaaaatatag aatgtgtata cataggcagt caaaatggtc aagataaagc ttggtttgaa
     9781 aatgaagtac gctttaagga aaaatttttt ttaagctcta aaggagtggt taatcaaagc
     9841 aaatttggca aaatcagttc tttactccac accttaaaac tctccaaaga ttgtagagaa
     9901 atttttaaaa aataccacat ccaagccgtt tttagtgtag gtggatatag tgcagctcct
     9961 gcatcttttg cagctttatt ctcacatttg cctcttttta tacatgaaca aaattcaaaa
    10021 agcggctctt taaatatgct tttaaaacct ttcgctacaa aattttttag cgcctttgaa
    10081 aaagaaatta gcccttatcc cgtagcagat aaattttttg ataatgctag gattcgcaaa
    10141 gaattaaaaa atattatttt cctaggagga tcacaaggag ctcaatttat caacgaacta
    10201 gctttaaatt tagcaccaaa acttcaagaa caaaatatca aaatcatcca tcaatgtgga
    10261 aaaaatgatt ttgaaaagtg caaaaaacat tatcaaagct taaatatcca agctgatatt
    10321 tttgatttta gtttaaattt ggaagaaaaa atgaaaaatg cagatctagc tatatcaaga
    10381 gcaggtgcaa gtactctttt tgaactttgc gctaatactt tacccactat ttttatacct
    10441 tatccttatg cagctaaaaa tcatcaatac tttaatgcta aatttttaca agatcaagct
    10501 ttatgtcaaa tttttatgca aaactctatt aatcttgatg aattttttaa gtcaatatta
    10561 aaactaaatc tagaaaatat ttctacaaga ttgcaaaata taacccaaaa aaatggcgca
    10621 gatatgctaa tccaaaaagc tttatttgat aatttgactt ttataagata aatatccaaa
    10681 gatatttact aaaattccaa caaaaactaa catcaaaata gcaaatgaaa aattttcaaa
    10741 tttatcatgc aaaaaaccta taatccattg tccttgtgct gcaattaaat atccaaaacc
    10801 ctgagctaaa gcagaaagtc tcgctgctat ttgagcatta gagctttttt gtgcaataaa
    10861 aagcaacgca atgccaaaaa ctccacccca tggaaaaccc atgataaaag cactaataat
    10921 aatagaaatt ttgctatcaa aaataaagag tataccaaaa gcgatcacat acatactgca
    10981 caaacctgct atgtaaaaag tatgtaaatt ttgtcttaat tttcctaaaa gtaaagggcc
    11041 aaaaagagac actggagctg caacaagttg agcaaataaa accatacttg tagaaaattc
    11101 tttatcaaat cctttttcta caacaatttg aacataccaa aaaaacaaag aataagctaa
    11161 aaaactttga aatcccataa aaagagtaat tttccaagtt gttaaatttg taaaaagatt
    11221 gattttttta tgagcttttt tcttaatgcg aaaaaatcta ccatttttag cttgaggata
    11281 gtaaactact aaagctataa aagaaaaaat agcccagaaa aacatagctc cagctaaatc
    11341 aaatacacta agcaaaggta tagctaaagc aatacccata atcgaagaaa tactcaaaac
    11401 aagactataa attcccatta tacttgccat tttttttgga aatttttctt taataaaact
    11461 aggaagtaaa acatttgcaa ttgcaatacc acagcccatt gctaacattc ctaaaaataa
    11521 gccatataca ccaaaataag aacgaataat ttcgcctaaa aaaattaaaa aaattccaaa
    11581 aacaatagca cgaataggag aaaaataccc cacaataaaa gaaatacttc caaaagctat
    11641 caaaggaaga cttgtaagta tgcccgctac ggttgagttt aaataatact tatctttaat
    11701 aatatcaata ataggcccca ctgcagtaat tggggctcta agattaaaag ctacaataat
    11761 aacaataata acattaatcc aaaatatctt tttaaaagaa gccataaaag ccttatttat
    11821 taagttctac tttgaatatt ttaccttctg ccatcttagg aatccataaa atattacctt
    11881 caataaatat atctgcagga cctttcatca aaggaagttc aagttttaca gatttaacat
    11941 tatctaaatt ataaatatat ccatttagat tatttcccca agaacttacc aataaaccat
    12001 ctttataagg aactattcca tcataagatt ctttttcatt tttaattata ctgagttctt
    12061 ttgtatttaa atcataagcc attacaacac cgccacttac accatcagga tgataaccag
    12121 ctataaaaag cttatgtttt tttctatcta gatataaccc atttggaccg ccaaattttg
    12181 ctaaatcaag ttttaataat tcatcatatt gcttagtttt taaatcaacc tttaaaataa
    12241 gtcctgtgcc agtatcgcta accaaaagcg tattgtcgtc taatttttct atgtcattta
    12301 aaaagattgc acctttaata ggtaaattaa aaatttcttt tttagtttta agatcaaaac
    12361 cgcgtaaaac atcgatatct accacataaa gagtttttcc aatctccatc ataccttttg
    12421 gtgcattaag atgggttaaa aatttatatt ctagcacttt gccattttta tcaagtttag
    12481 aaataaatcc atcattatct ttcgccaaag gttcaagttt ttctcctaca ttagatacat
    12541 aaacatagtt tttatctaca aaaatacttt cagggttttt aaaaccatca aattcttgat
    12601 attttaattc acttgcacca agcaaacttc caagaagcgc taaacttaaa acatattttt
    12661 tcatattttc tcctttattt aaaaatattt tcattgaatt atatttattt ggataaaaaa
    12721 aatgtgctag ttttttgata aaaaatacaa gttttttgtc ttttgatatt gcttaggagt
    12781 ttgctcatat ttctctttaa atctttcaat aaaccaagct accgaagaaa aagcgcactc
    12841 attagctatt tcattaatat tttttttaga aaatttaagt aaaatctttg ctttttgcaa
    12901 ccttttttca tctaaccatt ttttaggatt ttgtccaaaa catttcttaa attctttaga
    12961 aaaagttgct aaatctaatt tcgcaaaatt agacatttca tttacgctta aaaattctct
    13021 accgcaatac tcaaaaagtt gggaaagatc gaggcgaaat tcttttaaaa ttc
//
LOCUS       DAPWGO010000043        13055 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.044, whole genome shotgun sequence.
ACCESSION   DAPWGO010000043 DAPWGO010000000
VERSION     DAPWGO010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13055)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13055)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13055
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.044"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            76..975
                     /gene="hisG"
                     /locus_tag="RJ336_001080"
     CDS             76..975
                     /gene="hisG"
                     /locus_tag="RJ336_001080"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDZ5213531.1"
                     /translation="MQENTRLRIAIQKSGRLSKESIELLSECGVKMHIHEQSLIAFST
                     NLPIDILRVRDDDIPGLIFDGVVDLGIIGENVLEENELERQSLGENPSYKLLKKLDFG
                     YCRLSLALPQENKFQNLKDFEGLRIATSYPQLLKRFMKENGINYKNCMLTGSVEVAPR
                     ANLADAICDLVSSGATLQANNLKEVKVIYESRACLIQKENALSKEKQALVDKIMLRVA
                     GVMQARESKYIMLHAPKEKLDKIQALLPGVERPTILPLAHDEKNVALHMVSKENLFWE
                     TMEALKEEGASSILVLPIEKMLK"
     gene            983..2269
                     /gene="hisD"
                     /locus_tag="RJ336_001081"
     CDS             983..2269
                     /gene="hisD"
                     /locus_tag="RJ336_001081"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDZ5213532.1"
                     /translation="MQILVYDNLDEKQKEEALKRPAINAKDEISKIVSSIIKEVQEKG
                     DEALIEQALKFDKAEISKIKITQKEITQASNRLDKDLQEAILVAYENIKKFHEAQIPH
                     EIALETTKGVKCEVLTRPIEKVGLYIPGGLAPLFSTVLMLAIPAKIAGCEKIVLASPA
                     KINDAVLFCAKLCGVDEIYQMGGAGAIAALAYGTQSVLKVDKIFGPGNAFVTEAKRQV
                     SSDINGATIDMQAGPSEVLVIADDLANEKFVASDLLSQAEHGADSQVILVCLSQDFAK
                     KTSDEVQSQLEFLPRKELASKSIANSRIIIAKDLNQALEISNLYAPEHLIIQTQNPRE
                     LLKGVKHAGSVFLGAYSPESMGDYASGTNHVLPTYGLTKTHSSLGLADFSKRMTVQEL
                     SKEGFLALGKSVEILAQNEHLDAHKNAVTFRLESLK"
     gene            2266..3324
                     /gene="hisB"
                     /locus_tag="RJ336_001082"
     CDS             2266..3324
                     /gene="hisB"
                     /locus_tag="RJ336_001082"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HDZ5213533.1"
                     /translation="MSQKILFIDRDGTLIEEPKSDFQIDTLEKLRFEKDVIPTLLKLK
                     NFGFKFVMVSNQDGLGTPSFPKENFEIAHEKMLDILKSCGIEFQDIFICPHFENENCA
                     CRKPKTAMLEEYIKHELYDKEQSFVIGDRESDMILASNLGVRGLKYGELSWKEIENEI
                     LSSFRSASYQRTTKETDIKVKVCLNGGKISIKTGIDFFDHMLEQIAVHGGIGLEISCK
                     GDLEIDEHHSVEDVALALGACIKKALGDKIGIARYGFALPMDECLASCAMDFCNRPHL
                     VYKAKFKKSHLGALSTEMIEHFFYSLSYAMGISLHLKVKGKNDHHKAEGLFKAFAKAL
                     KMAVKIESENLASSKGVI"
     gene            3321..3908
                     /gene="hisH"
                     /locus_tag="RJ336_001083"
     CDS             3321..3908
                     /gene="hisH"
                     /locus_tag="RJ336_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDZ5213534.1"
                     /translation="MKIIIIDTACANLASLKFCLDRLGFNATISRDLKELESADKLFL
                     PGVGTAKEAMKNLKQFNLINFIKNTKKPLLGICLGMQILGNFSEELNQETLKLIDFTT
                     QKFKVKEGFTFPHMGWNQVHSSHALFKGLEGAYFYFVHSYCVGLGEYTIADCEYSQKF
                     SASVMKDNFYGVQFHPERSSEAGEILISNFIKDIG"
     gene            3905..4636
                     /gene="hisA"
                     /locus_tag="RJ336_001084"
     CDS             3905..4636
                     /gene="hisA"
                     /locus_tag="RJ336_001084"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDZ5213535.1"
                     /translation="MTQIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAG
                     AKELHLVDLTGAKDPSKRQLALIEKLAKEVSVNLQVGGGIRSKAEVRALLDCGVKKVV
                     IGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFY
                     SNKGLKHILCTDISKDGTMQGVNARLYKLIHEIFPHICIQASGGVASLKDLENLKGIC
                     SGVIVGKALLDGVFSVEEGIRCLAN"
     gene            4621..5577
                     /locus_tag="RJ336_001085"
     CDS             4621..5577
                     /locus_tag="RJ336_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrgA protein"
                     /protein_id="HDZ5213536.1"
                     /translation="MSSKLSYKELALEILKQSDKPLSANEIWQKALEKGLDKKLSSIG
                     QTPIATLGARIYVDIKELQHNSLFIKASQKPRTFWLKERENELLKLDNKNEITNEKQE
                     KNKFHERDLHPLLVKFLYENLDFNLNCKTIYHEQSKKGKGGEDKWNYPDIVGVYFPYD
                     DYEKETITLLENIKQNSYKLFSFELKIALNFSNLKECYFQAVSNSSWANEGYLVVLQE
                     IDSEVLSELRRLNQSFGIGVIKLEKDISNSQILLSAKEKELDIQTLNMLINKNPNFKE
                     FIDDINKQIKVGKEAKIQANFDEIKSDEEMEKYLKEKCILEK"
     gene            5578..6345
                     /gene="hisF"
                     /locus_tag="RJ336_001086"
     CDS             5578..6345
                     /gene="hisF"
                     /locus_tag="RJ336_001086"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDZ5213537.1"
                     /translation="MLTKRIIACLDVKDGRVVKGTQFKNHKDMGDIIELARYYSQNGI
                     DELVFYDIAASARKERISREWVSEVAKNINIPFCVAGGIKSEEDAAELLANGADKISI
                     NSPALNDPSLITRLAKSFGVQCVVVGIDSFKDENGNLKVFQYTGDEKTSKNSGKSTLE
                     WVKEVQDLGAGEIVLNMMNQDGVKNGYDLEQLEAVYKICKVPLIASGGAGKIEHFLEA
                     FKLGIDGALAASVFHQKLIDIKELKIYLKNQGLSIRI"
     gene            6347..6970
                     /locus_tag="RJ336_001087"
     CDS             6347..6970
                     /locus_tag="RJ336_001087"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDZ5213538.1"
                     /translation="MQNFKELNEKIAWQKVDHLLPVIVQDAKTCEVLMLGFMNNEALE
                     KSLESGKVVFFSRTKQRLWMKGEKSGNFLNIVDLSLDCDNDTLLILANPVGPTCHTGD
                     ISCFEKISKNADFVFLARLEKLINARKNADENTSYTAKLFKSGTKRIAQKVGEEGVET
                     ALAATVKDKEELICEAADLMYHLSVLLADANLSFSDVISKLKERHKA"
     gene            complement(6994..8154)
                     /locus_tag="RJ336_001088"
     CDS             complement(6994..8154)
                     /locus_tag="RJ336_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HDZ5213539.1"
                     /translation="MINTKEDFLLLIKQIEQKSGYKKPKAFGIARLDRGQLNKNKILQ
                     ASFALINYEQNFGSAAIMLEAFMQRGVEIDFNASEFVQTLKLEDIDFALSCFKPFLEE
                     EGHQNIDLLKIIKDKFKDDEFAFVCLFEDKEPLSVESVYLKLYLLSTKKVPLRSINLN
                     GAFGLLSNVAWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTR
                     ILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGACMVEGRISSSAIVGEGSDVGGGA
                     SILGVLSGTSGNAISVGKACLLGANSVTGIPLGDNCIVDAGIAVLEGTKFLLKDAEEL
                     AKLNPYFNFDKEIYKGLELKGLNGLHFRQDSISGAMIVALNKKAVKLNEALH"
     gene            complement(8180..9286)
                     /locus_tag="RJ336_001089"
     CDS             complement(8180..9286)
                     /locus_tag="RJ336_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HDZ5213540.1"
                     /translation="MKEQILEKLKTVKYPGFEKDIVSFNFVKDIKIQDDGVFIDIEIV
                     SANPEVANEIRKNATEALSSLALKNIELNIITPKIPEEKSNSRSGKNIAPQVKNFIMV
                     SSGKGGVGKSTTTVNLAISMAKMGKRVGILDADIYGPNIPRMLGETKTQPEVVGQRLK
                     PILTHGVYMMSMGVLIEEGQGLMWRGAMIMKAIEQLLADVIWPELDVLFLDMPPGTGD
                     AQITSAQSIPITAGVCVSTPQTVSLDDSKRALDMFNKLHIPIAGVIENMSGFLCPDNG
                     KEYDIFGKGTAEDMAKAYKSEVLAQIPIEMIVREGGDEGKPVSFYHPESVSSKRYLTA
                     AEKIWGFIEKINNEGGADNSAIQPVMNGKSACSH"
     gene            9409..10524
                     /locus_tag="RJ336_001090"
     CDS             9409..10524
                     /locus_tag="RJ336_001090"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HDZ5213541.1"
                     /translation="MSEISLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSF
                     YPFKKIVVTSSNITYMKKFTKNYEFIEGGDTRAESLKKALELIDSEFVMVSDVARVLV
                     SKNLFDRLIENLDKADCITPALKVADTTLFDNEALQREKIKLIQTPQISKTKLLKKAL
                     DQNLEFTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLDLPTPSFEIFTGNGFDV
                     HEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMK
                     FKNANSMELLKQAYDKVREVGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEF
                     RINVKATTTEKLGFIGRKEGMAVLSSVNLKYFDWTRL"
     gene            10521..11408
                     /locus_tag="RJ336_001091"
     CDS             10521..11408
                     /locus_tag="RJ336_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDZ5213542.1"
                     /translation="MKVLIIENEIYLAQSISIKLSDAGYSCEIINSFDEYNGEKYYDI
                     VLLSTNTNNFLKAVGQFKHSIIILLISYISTDTVSNPLKLGASDYIQKPFMIEELIRK
                     IKHYQDFRKLSILNKAYQSYIKSRLETIKIPEYNYKKLKLPLILKSNKQSSADAFVFN
                     YANECDITLSFIDLTSTNSVEKVMKLPTENNLLFLSNFQALKATEKEKLLDFIQNKNV
                     ILHTNSNTDDLKINCINLNDNEKNIDSNEILTIDEYVKYVIINYQNIFPDTDLSKKLG
                     ISRKSLWEKRKKYEISKKK"
     gene            11386..12546
                     /locus_tag="RJ336_001092"
     CDS             11386..12546
                     /locus_tag="RJ336_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HDZ5213543.1"
                     /translation="MKSARKNKNITIDQNEFGILSLIKEGLLGTCTHLMNEKEVNEII
                     KSGKFKGESFPYPLSFAPKNAEEALNDIKSGDRIDLILDEKVVGHIDFKSRFKNNKNF
                     SDIFSPNTCSLEDMGTTCISGKIEIYNSQIKKIKENFQQIKNNLNAQKITAIVSSFDP
                     LHRAHERMFRWTIDKADLVVIFLVESFDANGFEFELKEAYLKKFIQNYLPPDRIFIFP
                     LKNINIFHAHLNPGLESIIAKSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYG
                     IEVIVLPEFVFCDQCRMIVSTRSCPHGCHHHLHYNSQSLKDLLRAGIIPPAIFMRKEV
                     SSVILTSLFPNRLKNMQKIYNELFPTDGILEYKNDEEFYQKLLEIHQMSYMV"
     gene            12551..13051
                     /locus_tag="RJ336_001093"
     CDS             12551..13051
                     /locus_tag="RJ336_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HDZ5213544.1"
                     /translation="MQKLFLTFFYSGSIKKASGTFGTIAALIPAFFILKYLGINTLFL
                     LSILIFVASIRVIDDYEKKTGIHDDKHIVIDEVAGVFLACAIAASVENSIVNFILAFV
                     LFRLFDITKPSIIGKIDKKVKGGLGVMLDDMLAGLFAGLLSAVIYGFLLKFNLVFWDI
                     NLKDLF"
BASE COUNT         4708 a         1931 c         2233 g         4183 t
ORIGIN      
        1 tttctaaaac ccttgctaaa aattcaacta cttatgctaa tataagtttt taatttttaa
       61 tttcaaggat atgttatgca agaaaacact cgtttacgca ttgcgataca aaaatcaggt
      121 agactttcaa aagaatccat agagcttctt tcagaatgtg gtgttaaaat gcatatccat
      181 gaacaaagtt tgatcgcttt ttctacaaat ttacccatag atattttacg cgttagagat
      241 gatgatatcc ctgggcttat ttttgatggg gttgtagatt taggcattat aggggaaaat
      301 gttttagaag aaaatgaact tgaacgccag tctttaggag aaaatccaag ctataagctt
      361 ttaaaaaagc tagattttgg atattgccgt ctttctcttg ccttacctca agaaaataaa
      421 tttcaaaatt tgaaagattt tgaaggctta aggatagcta cttcttatcc acaactttta
      481 aagcgtttta tgaaagaaaa tgggattaat tataaaaatt gtatgcttac aggttctgtt
      541 gaagtagccc ctagggcaaa tttagccgat gcgatttgcg atcttgtttc aagcggggca
      601 actttacaag caaacaatct taaagaagtt aaagtcattt atgaatctcg tgcttgtttg
      661 attcagaaag aaaatgcttt aagtaaagaa aaacaagcct tagtggataa aattatgttg
      721 cgtgtagcag gagtaatgca agcaagagaa tctaaataca ttatgcttca tgctccaaaa
      781 gaaaagcttg ataaaattca agccctactt ccaggagttg aaagaccgac tatcttacct
      841 ttagcacacg atgaaaaaaa tgtagcttta catatggtaa gtaaagaaaa tcttttttgg
      901 gaaaccatgg aggctttaaa agaagaaggt gcgagttcga ttttagttct gcctatagaa
      961 aaaatgttaa agtgagtaaa aaatgcaaat tttagtatat gataatttgg atgaaaaaca
     1021 aaaagaagaa gcgttaaaac gccctgctat aaatgcgaaa gatgaaattt caaaaatagt
     1081 aagttctatc attaaagaag tgcaagaaaa aggcgatgaa gctttgatag aacaagcttt
     1141 gaaatttgat aaggctgaaa tttcaaagat taaaatcact caaaaagaaa tcactcaagc
     1201 aagcaatcgt ttagataaag atttacaaga agctatttta gtggcttatg aaaatatcaa
     1261 aaaatttcac gaagcccaaa tcccacatga aatcgctctt gaaactacaa aaggcgttaa
     1321 atgtgaagtt ttaacacgcc ctatagaaaa agtaggactt tacataccag ggggtttggc
     1381 acctttgttt tcaacggttt taatgctagc tattcctgca aaaattgcag gttgtgaaaa
     1441 aatcgtttta gcaagtcctg caaaaatcaa tgatgctgtg cttttttgtg ctaagctttg
     1501 tggcgtggat gaaatttatc aaatgggcgg tgcaggagct atagcagctt tggcttacgg
     1561 tacccaaagt gttttaaagg tggataaaat ttttggccca ggaaatgcct ttgtaaccga
     1621 agcaaaacgc caagtaagta gcgatataaa cggagcgact attgatatgc aagcaggacc
     1681 tagtgaagtt ttagtaatag ctgatgattt ggctaatgaa aaatttgtag ctagtgattt
     1741 gctttcacaa gctgaacatg gtgcagattc tcaagtgatt ttggtgtgtt taagtcaaga
     1801 ttttgctaaa aaaacaagcg atgaagtcca aagtcaatta gaatttttac ctcgcaaaga
     1861 acttgcaagc aaaagcattg ctaattcacg cattatcata gctaaagatt taaatcaagc
     1921 cttagaaatt tcaaatcttt atgcccctga acatttgatc atacaaactc aaaatccacg
     1981 agaactttta aaaggtgtaa aacacgcagg atcggtattt ttaggagctt attccccaga
     2041 gtctatgggt gattatgcaa gtgggacaaa tcatgtttta cctacttatg gacttactaa
     2101 aacgcattct agtttaggtt tggcagattt tagtaaaaga atgaccgttc aagaattaag
     2161 taaagaaggc tttttagctt tgggtaaaag tgttgaaatt ttagcacaaa atgagcattt
     2221 agacgcacac aaaaatgcag taacttttcg tttagagagc ttaaaatgag tcaaaaaatc
     2281 ctttttatag atagagacgg cactttaata gaggagccaa aaagcgattt tcaaatcgat
     2341 actcttgaaa aattgcgttt tgaaaaagat gttattccta ctcttttaaa attaaaaaat
     2401 tttggattta aatttgtcat ggtaagcaat caagatggtc ttggaacgcc aagttttcca
     2461 aaggaaaatt ttgaaatcgc tcatgaaaaa atgcttgata ttttaaaaag ttgcggtata
     2521 gaatttcaag atatttttat ttgtccgcat tttgaaaatg aaaattgtgc ttgtagaaaa
     2581 cctaaaaccg ctatgttaga agagtatatc aaacacgaac tttacgataa agaacaaagt
     2641 tttgttatcg gagatcgtga gagtgatatg atcttagctt caaatttagg cgtgcgtggt
     2701 ttaaaatacg gcgaactttc ttggaaagaa atagaaaatg aaattttaag ttcttttaga
     2761 agtgcgagtt atcaaagaac tactaaagaa acagatataa aagtaaaagt gtgcttaaat
     2821 gggggtaaga ttagcattaa aacaggcatt gatttttttg atcacatgtt agagcaaatc
     2881 gctgtacatg gaggtatagg gcttgaaatt tcttgcaaag gggatttaga aatcgatgag
     2941 catcatagcg ttgaagatgt agccttagca cttggagctt gtatcaaaaa agccttaggg
     3001 gataaaatcg gcattgcaag atatggtttt gctttaccta tggatgagtg tttggcaagt
     3061 tgtgcgatgg atttttgcaa tcgtcctcat ttagtctata aagccaaatt taaaaaatct
     3121 catttagggg ctttaagcac agaaatgatc gagcactttt tttattcttt aagctatgct
     3181 atgggtataa gtttacattt aaaagttaaa ggcaaaaacg atcatcataa agccgaaggg
     3241 ctttttaaag cctttgcaaa agctttgaaa atggcagtga aaatagaaag tgaaaattta
     3301 gccagctcta aaggagtgat atgaaaatca tcatcatcga tacagcctgt gcgaatttag
     3361 catctttgaa attttgtctg gatagattag gttttaatgc aactatcagt agggatttaa
     3421 aagaacttga aagtgcggat aagctttttt tacctggagt gggtaccgca aaagaagcga
     3481 tgaaaaattt aaaacaattt aatcttatta attttattaa aaataccaaa aaacctttgc
     3541 ttggtatttg tttaggtatg caaattttag gaaatttttc cgaagaatta aatcaagaaa
     3601 ctttaaaact tatagatttt acaacccaaa aatttaaagt taaagaaggc tttacttttc
     3661 cacatatggg atggaatcaa gttcatagct ctcatgcttt gtttaaaggt ttagaagggg
     3721 cttattttta ttttgtgcat agttattgtg taggacttgg ggaatacact atagcagatt
     3781 gtgagtattc gcaaaaattt agcgcaagtg taatgaaaga taatttttac ggggtgcaat
     3841 ttcaccctga aagaagcagt gaagcggggg aaattttaat ttcaaatttt attaaggata
     3901 taggatgact caaatcatac ccgcactcga tcttatagat ggcgaagtgg tgcgtcttgt
     3961 aaaaggggat tatgaacaaa aaaaagtata caaatacaat cccttaaaga aattcaaaga
     4021 atacgaaaaa gcaggagcga aagaacttca tcttgtagat cttacaggtg caaaagatcc
     4081 tagcaaaaga caacttgctt tgatagaaaa attagccaaa gaagtcagtg tcaatttgca
     4141 agtaggtgga ggtatacgct ctaaagcaga agttagagct ttgcttgatt gtggagtaaa
     4201 aaaagtagtt ataggatcta tggcaattaa agatgcgact ttatgtcttg aaattttaaa
     4261 agaatttggt agtgaagcta tagttttagc cttagatacg attttaaaag aagattatgt
     4321 tgtggctgta aatgcttggc aagaagcaag cgataaaaag cttatggaag ttttagattt
     4381 ttatagcaat aaaggcttaa aacacatact ttgcacagat atttcaaaag atggcaccat
     4441 gcaaggagta aatgcaagac tttataaact tatccatgaa atttttcctc atatttgcat
     4501 tcaggcaagt ggtggagtag caagcttaaa agaccttgaa aacttaaaag gaatttgcag
     4561 tggggttatc gtaggaaaag ctttattaga cggagttttt agtgtagaag aagggataag
     4621 atgtctagca aattaagtta caaagaactt gctttagaaa ttttaaaaca aagcgataag
     4681 cctttaagtg ctaatgaaat ttggcaaaaa gctcttgaaa aaggcttaga taaaaagctt
     4741 tctagtatag gacaaactcc aattgctact ttaggggcta ggatatatgt tgatataaaa
     4801 gaattgcaac acaattcttt atttatcaaa gcttcccaaa aacccagaac tttttggtta
     4861 aaagaaagag aaaatgaact tttaaagctt gataataaaa atgaaattac caatgaaaaa
     4921 caagaaaaaa ataaatttca tgaaagagat ttacacccct tgcttgtaaa atttttatat
     4981 gaaaatttag attttaattt aaattgcaaa acaatttacc acgaacaaag caaaaagggt
     5041 aagggcgggg aagataagtg gaattatcct gatattgtag gggtttattt tccttacgat
     5101 gattatgaaa aagaaaccat aacactttta gaaaatatca aacaaaatag ttataagctt
     5161 ttttcttttg aacttaaaat tgctttaaat ttttcaaatt taaaagaatg ttattttcaa
     5221 gctgtaagta attctagctg ggcaaatgaa ggctatttgg ttgttttaca agaaattgat
     5281 agcgaagttt taagcgagtt aagacgctta aatcaaagtt ttggcatagg agtgataaaa
     5341 cttgaaaaag atatttcaaa ttctcaaatt ttacttagtg caaaagaaaa agaacttgat
     5401 attcaaacac taaatatgct gattaataaa aatccaaatt ttaaagaatt tattgatgat
     5461 ataaacaaac aaattaaagt gggcaaagaa gcaaaaattc aagctaattt tgatgaaatt
     5521 aaaagcgatg aagaaatgga aaaatatctt aaagaaaaat gtattttgga gaaataaatg
     5581 cttacaaaac gcataattgc atgtttagat gtcaaagatg gcagagtagt aaaaggaaca
     5641 caatttaaaa accataaaga tatgggagat atcatagaac ttgctaggta ttattctcaa
     5701 aatggtattg atgaacttgt tttttacgat attgctgcaa gcgctagaaa agaacgcata
     5761 tcaagagaat gggtaagtga agtagcaaaa aatatcaata ttcctttttg tgttgcaggg
     5821 ggtattaaaa gcgaagaaga tgcggctgaa cttttagcta atggggcaga taaaatttct
     5881 atcaattctc ctgctttaaa tgatccaagc ctaatcacac gccttgctaa aagctttggc
     5941 gtgcaatgcg tagtagtagg gattgatagt ttcaaagatg aaaatggaaa tttaaaagta
     6001 tttcaataca caggcgatga aaaaacaagc aaaaatagtg gaaaaagcac tttagaatgg
     6061 gttaaagaag tgcaagatct aggcgcaggt gaaattgttt taaatatgat gaatcaagat
     6121 ggtgttaaaa atggctatga tttagaacaa ttagaagctg tatataaaat ttgtaaagta
     6181 cctttgatcg caagtggggg agcaggaaaa atagagcatt ttttagaagc ttttaaacta
     6241 ggtatagatg gggccttagc tgcttctgtt tttcatcaaa aacttataga cattaaagaa
     6301 ttaaaaattt atcttaaaaa tcaaggctta agtataagga tataatatgc aaaatttcaa
     6361 agaacttaat gaaaaaattg cttggcaaaa agtggatcat cttttacctg tcatcgtcca
     6421 agatgcaaaa acttgtgaag ttttaatgct aggctttatg aataatgaag ccttagaaaa
     6481 aagcttagaa agtggcaaag tagtcttttt ttcacgcaca aaacagcgtc tttggatgaa
     6541 gggtgaaaaa agtggaaatt tcttaaatat cgtagattta agcttagatt gcgataatga
     6601 cacgctttta attttagcaa atcctgtagg gcctacttgt catacgggcg atatttcttg
     6661 ttttgaaaaa atttctaaaa atgcggattt tgtttttcta gccagacttg aaaagcttat
     6721 taatgcacgc aaaaatgccg atgaaaatac ttcttataca gcaaaacttt tcaaaagtgg
     6781 tacaaaacgc atcgcacaaa aagttggtga agaaggtgta gaaacagctt tagcagcgac
     6841 agtaaaagat aaagaagagc ttatttgtga agcagcggat ttaatgtatc atttaagtgt
     6901 tttacttgca gatgcaaatc ttagtttctc agatgtgatt tcaaagttga aagaaagaca
     6961 taaagcttaa agctttatgt aaataaattt atatcaatgc aaggcttcgt taagtttgac
     7021 tgctttttta tttaaagcta ctatcatagc accgcttata gaatcttgac ggaaatgtag
     7081 cccatttaaa cctttaagct ctaagccttt gtaaatttct ttatcaaaat taaaataagg
     7141 attaagttta gcaagctcct cagcatcttt gagtaaaaat ttcgttcctt ctagcactgc
     7201 aatacctgca tcaactatac aattatcccc taaaggaatt cctgtcactg aattagcccc
     7261 taaaagacaa gccttaccta cgcttatagc attgccactt gttccactta aaacacctaa
     7321 aatcgaagct ccgccaccta catcagaacc ttctcctact atagcactcg aactaatacg
     7381 cccttcaacc atacaagctc ctgttgtacc tgcattaaaa ttcacataac ttgcccctgg
     7441 catgatggtt gttcctgctg ctaaagatgc acccattctt actttggaac tttctaaaat
     7501 tcttgtatta tcctcaggga taatatgcgc taaaaatctt ggaaatttat caacaaaatc
     7561 gatttttgga tattgattgc tcatttttaa acgcatttca tttgctctta aatactcaag
     7621 ctcgataggt ttatcatcgc tccaagctac attgcttaaa agtccaaaag ctccatttag
     7681 attgatactt cttaaaggta cttttttagt agaaagcaaa taaagtttta gataaacact
     7741 ttctacactt aaaggttctt tatcttcaaa aagacaaaca aaagcaaact catcgtcttt
     7801 aaatttatct ttgataatct ttaataaatc aatattttga tgcccttctt cttctaaaaa
     7861 aggtttaaaa caagaaagcg caaaatcaat atcttctaat tttaaagttt gcacaaactc
     7921 actcgcatta aaatcaatct ccacacccct ttgcataaaa gcttcaagca tgattgccgc
     7981 tgagccaaaa ttttgctcat aattaatcaa agcaaaactt gcttgtaaga ttttattttt
     8041 atttaactgt cctctatcaa gccttgctat accaaaagct ttaggttttt tatagccact
     8101 tttttgctca atttgtttga ttaaaagtaa aaaatcttct ttggtattaa tcattttctt
     8161 ttccttatcc acttaatttt taatgcgaac acgcactttt tccattcatc acaggttgta
     8221 tagcagaatt atccgcaccg ccttcattgt taatcttttc tataaagccc caaatttttt
     8281 cagctgctgt taaataacgc tttgaactca cactttcagg gtgataaaaa ctcacaggct
     8341 tgccttcatc tccaccttct cttactatca tttctatagg aatttgtgct aaaacttcac
     8401 ttttataggc ttttgccata tcctcagccg ttcctttgcc aaaaatatca tactctttac
     8461 cattatcagg acataaaaat ccactcatat tttcaatcac acccgctata ggaatgtgaa
     8521 gtttattaaa catatctaaa gctcttttac tatcgtctaa agatacggtt tgaggtgtac
     8581 ttacacaaac tcctgcagta ataggaatac tttgtgcaga agtaatttgc gcatcgcctg
     8641 ttcctggagg catatccaaa aacaatacat caagttcagg ccaaatcaca tcagctaaaa
     8701 gctgctcgat tgctttcata atcatagctc cacgccacat aagaccttga ccctcttcga
     8761 tcaaaacccc catactcatc atataaacac catgagttaa aataggcttt aatctctgcc
     8821 ctactacttc aggctgagtt ttggtttcgc ctagcattct tggaatattt ggcccataaa
     8881 tatctgcatc taaaatccct actctttttc ccattttagc catggaaatt gctaaattta
     8941 ctgtagttgt agatttgccc acaccacctt ttccacttga aaccatgata aaatttttta
     9001 cttgtggagc gatatttttt ccacttcttg aattgctttt ttcttcagga atttttggag
     9061 taatgatatt aagttcaata ttttttaaag ccaaactcga taaagcttca gtggcatttt
     9121 tacgaatttc attagctact tcaggatttg ctgaaacgat ttctatatca ataaatacac
     9181 catcatcttg aattttaata tcttttacaa agttaaaact cactatatcc ttttcaaaac
     9241 caggatattt tacagttttt agcttctcta aaatttgttc tttcatgttt tttccttgtc
     9301 ttttaaaaaa atcaatttta ctaataaaat gataaaattt agctttttat aagtgtataa
     9361 tatggtaaca ttataaaaac caacaatatt aaaaagagga atgaaaaaat gagtgaaatt
     9421 agcctcatta tgttagcagc tggaaattct actcgtttta acacaaaggt aaaaaaacaa
     9481 tttttacgac ttggaaatga ccctctttgg ctttatgcaa caaaaaattt aagctctttt
     9541 tatcctttta aaaaaatagt tgttacctct agtaatatca cttatatgaa aaaatttact
     9601 aaaaactatg aattcataga aggtggtgat accagagcag aatccttaaa aaaagcctta
     9661 gagctcatag atagcgaatt tgttatggta agtgatgtag caagggtatt ggtgagtaaa
     9721 aatttgtttg atcgtttgat tgaaaattta gataaagcag attgtattac ccctgcttta
     9781 aaagttgcag atacaacact ttttgacaat gaagccttgc aaagagaaaa aatcaaactc
     9841 attcaaaccc cgcaaatttc taaaaccaaa ttgcttaaaa aagccttgga tcaaaaccta
     9901 gaatttacag atgatagcac agctatagct gcaatgggtg gaaaaatttg gtttgttgaa
     9961 ggtgaagaaa atgcaagaaa actaaccttt aaagaagatc ttaaaaagct tgatttgcct
    10021 acacctagct ttgaaatttt tactggcaat ggttttgatg tgcatgaatt tggagagaat
    10081 cgccctttgc ttttagcagg agtgcaaatt catcctacta tggggcttaa agcacacagc
    10141 gatggagatg ttttagctca ctctttaacc gatgcgattt taggtgctgc aggacttgga
    10201 gatataggag agctttatcc tgatactgat atgaaattta aaaatgccaa ctccatggag
    10261 cttttaaaac aggcttatga taaagtcaga gaagtaggtt ttgaactcat taatatagac
    10321 atttgcgtca tggcacaaag ccctaaactt aaagacttta aacaagctat gcaaagcaat
    10381 atagctcata ctttagattt agatgaattt agaatcaatg ttaaagccac aacaacggaa
    10441 aaattgggtt ttattggaag aaaagaaggt atggcggtgc ttagtagtgt aaatttaaaa
    10501 tattttgatt ggacaagatt atgaaagttt taattattga aaatgaaatt tatctagcac
    10561 aaagcattag cattaaacta agtgatgctg gatatagctg tgaaattatc aactcgtttg
    10621 atgaatacaa tggtgaaaaa tactatgata ttgtactgct ttctacaaat actaataatt
    10681 ttctaaaagc cgtaggtcag tttaaacata gtattattat tttgcttatt tcttatataa
    10741 gtacagatac agtttcaaat cctttgaaat taggtgctag tgattatatt caaaaaccct
    10801 ttatgataga agagctgatt agaaaaataa agcattatca ggattttaga aaactttcaa
    10861 tccttaataa agcttatcaa agctacatca aatcaagatt agaaacaatc aaaattccag
    10921 agtataatta taaaaaatta aaacttccat tgatattaaa atccaacaag caaagcagtg
    10981 ctgatgcttt tgtttttaat tatgcaaatg aatgtgacat tactctttct tttattgatt
    11041 taacatctac aaattcagtt gaaaaagtta tgaaacttcc cacagaaaac aatctcttat
    11101 ttttgagtaa ttttcaagca ttaaaagcaa cagaaaagga aaaactccta gattttatac
    11161 aaaacaaaaa tgttattttg cataccaatt caaatacaga tgatttaaaa ataaactgca
    11221 ttaatttaaa tgataatgaa aaaaatatcg atagcaatga aattttaacc atagatgagt
    11281 atgtaaaata tgttattata aattaccaaa atatatttcc tgatactgat ctttcaaaaa
    11341 aattaggcat ttcacgtaaa tctttatggg aaaaaaggaa gaaatatgaa atcagcaaga
    11401 aaaaataaaa acattaccat agatcaaaat gaatttggca tcttgtcact tattaaagaa
    11461 ggtttgctag gtacttgcac tcatttaatg aatgaaaaag aagtcaatga aatcattaaa
    11521 tcaggaaaat ttaaaggaga aagttttccc tatcccttaa gctttgcacc aaaaaatgct
    11581 gaagaagcac taaatgatat aaaatctggc gatagaatcg atctcatact agacgaaaaa
    11641 gtagtaggac atatagattt taaaagccga tttaaaaata ataaaaattt ttctgatatt
    11701 ttcagtccta acacttgctc tttggaagat atgggaacaa cttgtataag tggaaaaata
    11761 gaaatttaca attctcaaat taaaaaaata aaagaaaatt ttcaacaaat caaaaacaat
    11821 cttaatgcac aaaaaattac cgctatagtt tcaagttttg atcctttgca tcgtgcccat
    11881 gaaagaatgt ttcgttggac tattgataaa gcagatttag ttgtaatttt tcttgtagaa
    11941 tcttttgatg caaatgggtt tgaattcgaa cttaaagaag cttatttgaa aaaatttatt
    12001 caaaactatc ttccaccgga tagaattttc atttttccat taaaaaatat taatattttt
    12061 cacgctcatt taaatcctgg cttagaaagc attatcgcaa aaagtctagg ttgtaccaaa
    12121 ctagtagtag gacaaaatca tacaggactt ggaatgtttt atgatgataa tcaaccaaaa
    12181 accatacttg atgatttttc caaggattat ggcatagaag tgattgtttt gcctgaattt
    12241 gtattttgcg atcaatgtcg catgattgtt agcacaagat cttgccctca tggttgtcat
    12301 caccatttgc actataattc tcagtcttta aaagatttac taagagcggg tatcattcct
    12361 ccagcaattt tcatgcgcaa ggaagtatct agcgttattt taacttctct ttttccaaat
    12421 agattaaaaa atatgcaaaa aatttataat gagctttttc caactgatgg aattttagaa
    12481 tacaaaaatg atgaagaatt ttatcaaaaa cttttagaaa ttcatcaaat gtcttatatg
    12541 gtgtaacaaa atgcaaaaat tatttttaac ttttttttat tcaggttcta taaaaaaggc
    12601 aagtgggact tttggtacta tcgctgcttt aatacctgct ttttttatac ttaaatatct
    12661 tgggattaat actttgtttt tactaagtat tttaattttt gttgcaagta ttcgtgttat
    12721 agatgattat gaaaaaaaaa caggaattca cgatgacaaa cacatagtta tcgatgaagt
    12781 tgctggggtt tttcttgctt gtgctattgc agcaagtgtt gaaaattcaa tagttaattt
    12841 tattttggct tttgttttat ttagactctt tgacattaca aaaccttcta ttattggcaa
    12901 aatagataaa aaagtcaaag gcggactagg tgtaatgctt gatgatatgc tagcaggatt
    12961 gtttgctgga cttttaagtg cggtaattta tggattttta cttaaattta atttagtttt
    13021 ttgggatata aatttaaaag atttattttg aaatt
//
LOCUS       DAPWGO010000044        12775 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.045, whole genome shotgun sequence.
ACCESSION   DAPWGO010000044 DAPWGO010000000
VERSION     DAPWGO010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12775
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.045"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            41..637
                     /locus_tag="RJ336_001094"
     CDS             41..637
                     /locus_tag="RJ336_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDZ5213545.1"
                     /translation="MIVTKKALDFTAPAVLGNNEIVQDFNLYKNIGPKGAVVFFYPKD
                     FTFVCPSEIIAFDKRYQEFKNRGIEVIGISGDNEFSHFAWKNTPVNQGGIGQVKFPLV
                     ADLTKQIARNFDVLYAEAVALRGSFLLDADGTVRHAVVNDLPLGRNIDEMLRMVDTML
                     FTNEHGEVCPAGWNKGDEGMKANPKGVAEYLGKNEAKL"
     gene            756..1844
                     /gene="flhB"
                     /locus_tag="RJ336_001095"
     CDS             756..1844
                     /gene="flhB"
                     /locus_tag="RJ336_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HDZ5213546.1"
                     /translation="MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTI
                     TLFMMSFMGERIVNLYRYYQSFIGVEFDLRIIQAIMIKSIFEVLIILAPIVLSIMIAG
                     VLGNIMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFI
                     VLLKFMQELPRVELYTMVAQLTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGL
                     RMSKQEIKDEYKQMEGDPQVKGRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIR
                     YDTSKEQAPRVVAKGVDFLALRIKQVAYENNVVVYENPPLARELYKACDVNDLIPREM
                     FKAVAEVLGFVYNTNNKSRLAGQVKKGN"
     gene            complement(1850..2593)
                     /gene="motB"
                     /locus_tag="RJ336_001096"
     CDS             complement(1850..2593)
                     /gene="motB"
                     /locus_tag="RJ336_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HDZ5213547.1"
                     /translation="MAKKHKCPECPAGEKWAVPYADFLSLLLALFIALWAISKTNPAK
                     VEALKTEFVKIFDYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRL
                     QAALDQSDNQVALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGY
                     TDNSDSIIRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPINGNPQALENNRV
                     EIYFKVDTADTSTQKSVLELINKIGTKAP"
     gene            complement(2596..3372)
                     /gene="motA"
                     /locus_tag="RJ336_001097"
     CDS             complement(2596..3372)
                     /gene="motA"
                     /locus_tag="RJ336_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HDZ5213548.1"
                     /translation="MDLSTILGMVLAVTSISVGDILEGGNPLHVVHLSSFLIVMPTAA
                     FCAMTSTHKKIVKAAYKELKVVFKGSGVNLPERIAQLIEFAIIARRDGLLALESRTNE
                     IENEFLKNAMMMLVDGKSFEEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVG
                     AVFGLILALKLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKANGMDLVKEQ
                     IVITEAIKGIAEGANPRDLEAKLFNFLSHDDPKISQFDKG"
     gene            complement(3388..6027)
                     /gene="polA"
                     /locus_tag="RJ336_001098"
     CDS             complement(3388..6027)
                     /gene="polA"
                     /locus_tag="RJ336_001098"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDZ5213549.1"
                     /translation="MKTLTIIDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSL
                     KNEHKSDYIVFALDSKGKTFRSEIDPNYKQNRTPPPPELLEQIPICIEMIEKMGFISV
                     SQEGYEADDIIASFVRTCEDRDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAA
                     CLEKYGVKPHQIRDFLALCGDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVR
                     NERSRNLLLEGKENAFLSKKLASLYENLEVQDLIEKATYPDEEPLLKILEILEHYELN
                     TLLKKLRQNPDNKDKNLGFKATLIQDENKLFEILNTLDKESIIAFDTETTGLDTKEAK
                     IVGFSFCMSENEAFYVPLTHNYLGVGEQISLQSAKKAIEVIFNHFVIGHNLKYDFKII
                     QNNFGLNLPQKYADTMILAWLKNPSLRVNMDDLALRLFNYETLHFESLVKKGENFASV
                     ELEKACKYAAEDAYITLRFYLYFLKNLETPLLELAKNCEFDFIKIIMMMEENGIKLDT
                     NALEILMKKFENEIKNLSEEIYTLCEDRFNLNSPKQVGDILFEKLKLPSGKKGKTGYS
                     TDEKVLNALLDKHPVIAKILDYRELAKLYSTYCEPLLKLALKDKNSRIYSSFLQTGTA
                     TGRLSSKDPNLQNIPAHGQYAKDYKSCFVAKDGFSFISLDYSQIELRMLAHFSEDEKL
                     LNAFANDEDIHARTAIMIFGESNYETRSVAKSINFGLIYGMGYKTLSQNLKIEAHLAK
                     SYIEKYFENFTSIKKYFETVKNKAKQNGFITTLSGRKRYFDFENAKPMQIAMYERESI
                     NSILQGSAADVIKLAMLEINKELNEDKKLILQIHDELIFEVKDDLCENFVKKTRDIME
                     NIVKLKVKLKTSSSIAKNWGDLK"
     gene            6188..7549
                     /locus_tag="RJ336_001099"
     CDS             6188..7549
                     /locus_tag="RJ336_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HDZ5213550.1"
                     /translation="MTNQQIDGIADKNFNTPEGRKVFKKAVFSCWLGTAMEYADFALY
                     GLAAATIFSEVFFPEQTPVIALLLSFVTYGIGFIARPIGALFFGYLGDKHGRKNVMMS
                     TVALMGISTTLIGFIPSYAVIGVWAPICLVILRFMQGFGAGAELSGGTVMLGEYAPSK
                     RRGLVSSVIALGSNSGTLLASFVWLLMVQMDEASFKEWGWRVPFMGSILIALFAVYIR
                     FHVKETPVFEKQKNEMMKLRLNNEKHMKKDERSFWQRSRAFWTMVGLRIGENGPSYLA
                     QGFIVGYVTKILLLDKSVATTAVMIASLVGFLVIPLAGYLSDRFGRRITYRMFCLLLM
                     IYAFPAFMLLDSKNEIIVILTIIVGMSLASLGIFGVQAAWGVELFGVKNRYTKMAFAK
                     ELGSILSGGTAPMVASALLAYYGTWWPIATYFVLTAGIGFVTTFFAPETRGRDLNKIE
                     DAI"
     gene            7546..8553
                     /locus_tag="RJ336_001100"
     CDS             7546..8553
                     /locus_tag="RJ336_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HDZ5213551.1"
                     /translation="MRLILDTDIGNAIAGANTDDGLALALILASKEIKLEMLSTVCGN
                     VPSLVAYSVAKDLFKRLNLNIPVYLGANEALKEPSKAWRQRLDESVKNFKLEYLWENI
                     KSPEILENINPDAIFKMGELVSKNPKEISICAIGPLTNIAMTMKIFKDFDINLKELFI
                     MGGSFDMPYYTKDTNFGFDPEAASIVLNSRAKITLVPYNATMQTLLTHEDLKELQGKN
                     ILCDFIVETLGVWIDYASKTRGTKGTWIHDALTIAYALDSSIADFDECYADVICDSSL
                     ARGMSWRCFKEPKMSMGVDLSTKNCVKILKNVDNTKLLKLIKERLLKGVCYENYESIT
                     T"
     gene            complement(8509..8952)
                     /locus_tag="RJ336_001101"
     CDS             complement(8509..8952)
                     /locus_tag="RJ336_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDZ5213552.1"
                     /translation="MFDFLYNDISYLGLFIVCFLSSTLLPLASEAFVLGFIKLDFNPN
                     LVLIVATLGNTLGSLSTYGLAYLGKQKILEKYFSKSLKKLENFNANFAKFGSIFAFFT
                     FLPLVGDLFALGLGFAKYSFLKTIFFILLGKLSRYAFIIFIANSF"
     gene            complement(8957..11782)
                     /gene="uvrA"
                     /locus_tag="RJ336_001102"
     CDS             complement(8957..11782)
                     /gene="uvrA"
                     /locus_tag="RJ336_001102"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDZ5213553.1"
                     /translation="MNDTIKIIGARENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFG
                     TLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTI
                     TEIYDYLRLLYARVGIQHCHQCGQKISSMSASDIVSEILKFPKGAKIIIYAPLIREKK
                     GTYADLLENLRNKGYVRAQIDGVLVRLDEEIELAKTKKHTIKLVIDRLEIQEDLLSRL
                     ASDIEKGLQESFGEIEIEVLNHEEINLNKHYHFSEHCACFDCKISFVPLEPLSFSFNS
                     PKGACEACDGLGIRYTLDMKKIIDENLSLENGAVKIMYGFNKSYYYKFLIAFCEQNEI
                     PIKIPFMQLNEEQKRLVLYGNAKTIEFLWKRNRLKRTFEGVVKMAYEMLKDEKDLAEY
                     MSEKICKDCGGHRLKPESLAVKVAKKGLGEILDMSIEDSTAFFADEKNFSYLSEQQKL
                     ISKPILKEINERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYVL
                     DEPSIGLHERDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKAGKFGGE
                     VVFSGTYKELLKSKSETALYMNGKKQISQLQNRAQKEWLELKNVNINNIQDLSVKFPL
                     QNLVAITGVSGSGKSSLILQTLLPFAQEELNRAKKVKKLGGVQIEGLEKLDKVIYLDQ
                     SPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKAGRFSFNVKGGRCEKCSGDGE
                     IKIEMHFLPDVMVVCDTCQGKRYNDATLEIKYKGKNISEILNMSVLEASEFFTAVPKI
                     KQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLH
                     FEDVNKLILVLQHLVDLKNSVFVIEHNLDVIKNADYIIDMGPEGGVKGGKVISTGSVE
                     KVAKEHKKTRSYTGYYLDLELKNTQKS"
     gene            complement(11855..12640)
                     /locus_tag="RJ336_001103"
     CDS             complement(11855..12640)
                     /locus_tag="RJ336_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDZ5213554.1"
                     /translation="MEITDLPYLIIGIISGIASGLFGIGGGMIIVPSMFALGASAHHA
                     IGISVLQMIFAAVFGSYINYKKKNLNLKDGIMIGFGGLIGASFSGMLLKALSDVALTS
                     VFLAVSCIFFIKYAFGIKENIVQNQRSVWVKNVILFIAGAFTGIFAISLGIGGGLLIA
                     PILAYFLGYDSKKVVSLSLFFVIFASVSGIISFSNSGVIDSEVIHKGILVGIASMVGV
                     FIGIKIIEKMHISAHRKILLCVYALSILGTTHSLLNKLNLINF"
BASE COUNT         4039 a         2007 c         2105 g         4624 t
ORIGIN      
        1 taatttcgtt atcaataaaa tttattattt aggagaaaat atgatagtta ctaaaaaagc
       61 tttagatttt actgctccag cagtattggg aaacaatgaa attgttcaag attttaatct
      121 ttataaaaac ataggtccaa aaggagcggt agtattcttt tatccaaaag attttacttt
      181 tgtttgtcct tcagaaatta tagcttttga caaaagatat caagaattta aaaaccgtgg
      241 cattgaagta attggaattt caggagataa tgaattttca cattttgctt ggaaaaatac
      301 tccagtaaat caaggtggta ttggtcaggt taaatttccg cttgttgctg acttaactaa
      361 gcagattgct agaaattttg atgtacttta tgcagaagca gttgcccttc gtggttcgtt
      421 cttgcttgat gctgatggaa cagttcgcca tgctgtggtc aatgatttac cactaggtag
      481 aaatatagat gaaatgttaa gaatggttga tactatgctt tttacaaatg agcatggtga
      541 agtttgtcct gcaggatgga ataagggtga tgaaggtatg aaagctaacc ctaaaggcgt
      601 ggctgaatat cttggcaaaa acgaagctaa actttaattt cttagtataa agcctcttta
      661 cgaggctttt tcttcatttt tattctttaa ttgaaattca taaattttct actataattt
      721 tacacacata ttaaaatttt tatttaggct aaaatatggc aggcgaagat caagaaaaaa
      781 cagaagaacc cacgtccaaa aagatagaag atgcgcgtaa agaaggtaat gttccaaagt
      841 ctcaagatgc ggcagctatt gtaactttga taattggagt aactataact ttatttatga
      901 tgagttttat gggcgagaga attgtaaatt tatatagata ctatcaaagt tttattggtg
      961 ttgaatttga tttgcgtatt attcaagcca ttatgattaa aagcattttt gaggttttaa
     1021 ttattcttgc acctattgtt ttaagtatta tgattgctgg ggttttggga aatattatgc
     1081 aatttggttt tatttttaca actaaaccta ttatgccaaa tttaggaaaa atcaatcctc
     1141 taaaaggttt aaaaaacctt ttttcattga aaaaaattgt tgaaagtata aaaattattt
     1201 taaaagtggg tattgttttt actatagctt ttatagtttt acttaaattt atgcaagagc
     1261 ttccaagagt tgagctttat actatggttg cacagcttac ttggctaaga gacagagcta
     1321 ttgttttagc agctattgtt atagttgctt ttttaattat tgctgtttta gatgtttttt
     1381 tggtgcgttt tcagtatttt aaaggtttgc gtatgagcaa acaagaaata aaagatgagt
     1441 ataaacaaat ggaaggagat cctcaggtta aaggtagaat tcgtagactt caaatggaag
     1501 ctgcgcgtcg tcgtatggtt caagatgttg caggtgcgga tgtggtgatc acaaacccaa
     1561 cgcattatgc cgtagctatt cgttatgata caagtaaaga acaagcccct agggttgttg
     1621 ctaaaggagt ggattttctc gctcttcgca taaaacaagt agcctatgaa aataatgttg
     1681 tagtttatga aaatcctcct ttagcaagag agctttataa agcttgtgat gttaatgatc
     1741 ttattcctag ggaaatgttt aaagctgtag ctgaggtgct aggatttgtt tataatacaa
     1801 ataataagag tcgtttagct ggtcaagtaa aaaaaggaaa ctaaaacttt taaggtgctt
     1861 tagttcctat tttgttaata agctcaagaa ccgatttttg agtacttgta tctgctgtat
     1921 caactttaaa atatatttct actctattat tttctagagc ttgtggattt ccattgatag
     1981 gattattaag cccgtagctt ttaatgctaa tgttttttaa atttgctcca ccttctataa
     2041 aatattttaa tacattttcc gctctttggt aggcgagttc ataacttctt ataatagagt
     2101 cgctattgtc tgtatagcct ctaatttcta tttttgcttg aggtggcaaa tatgttgtta
     2161 gttcagccat acgttttaaa taatcttgta tatcagctga aacgatttga gcgctacctc
     2221 tttcaaattc aactttagat ggaaggttaa gagcaacctg attgtcgctt tgatctagag
     2281 ccgcttgaag acgtttgata gtttcttgct gcgtcatagt catttgtttt aatgatttga
     2341 gttcatcact ttcttctttt gctgcgcctt tatatttttc ttgagtttta ctctcttctt
     2401 tgactgtttg agtagaggtg taatcaaaga ttttaacaaa ttcagttttt aaagcctcta
     2461 ctttagcagg atttgtttta gaaattgccc aaagagcaat aaaaagtgcc aaaagcaaac
     2521 ttagaaagtc tgcataaggt acagcccatt tttcacctgc aggacattct ggacatttat
     2581 gtttcttggc catttttaac ctttatcaaa ttgtgaaatt tttggatcat cgtgacttaa
     2641 gaaattaaaa agcttagctt ccaaatctct agggttcgca ccttctgcaa ttccttttat
     2701 ggcttcagtg atgacaattt gctcttttac aagatccatt ccgttagctt tcatttttct
     2761 tccccaaggg gcaaaaagcg cataagcacc aaaaatccca gtaaccgtag ctgtaaaagc
     2821 acctgaaata cccgctgcca ttgcctgagg attatctagt aatttaagag ctagaataag
     2881 accaaaaacc gcaccaacaa gtcccatagt agggcaagtt tctccaaata ctatccaata
     2941 ttctgcgcat tctttataat gctcttcaag ttgttcggtt tgtatttcca tgctttcgtg
     3001 aatttcttca aagcttttac catctacaag catcatcata gcatttttta aaaattcatt
     3061 ttcaatctca ttggttcttg attctaatgc taaaagacca tctcttcttg caataatagc
     3121 aaattctatt aactgggcta tcctttcagg tagatttact ccagaacctt taaagacaac
     3181 tttgagttct ttataagctg cttttacaat ttttttatgt gtagaagtca ttgcacaaaa
     3241 tgcagccgtt ggcataacta taagaaagga agaaagatgc acaacatgta aaggattacc
     3301 accttctagt atatctccta ctgaaatact agtaactgca agcaccattc ccagtatggt
     3361 tgaaagatcc attaaatatc tccttgatta ttttaaatcg ccccaatttt tggcgatact
     3421 tgagcttgtt tttaatttta cttttaattt tactatattt tccataatat ctctagtttt
     3481 tttcacaaaa ttttcacata aatcatcttt tacttcaaaa attaattcat cgtgaatttg
     3541 caaaataagc tttttatctt catttaattc cttgttgatt tctaacattg caagtttgat
     3601 tacatcagct gctgagcctt gtaagattga attaatgctt tctctttcat acatggcaat
     3661 ttgcataggt tttgcgtttt caaaatcaaa ataacgcttg cgaccgctta aagtagtgat
     3721 aaaaccattt tgtttagctt tgtttttaac tgtttcaaaa tatttcttaa tactagtaaa
     3781 attttcaaaa tatttttcta tgtaagattt ggctaaatga gcttctattt ttaaattttg
     3841 acttaaagtt ttatagccca tgccataaat aagtccaaaa tttatacttt ttgcaacact
     3901 tctggtttca taattgcttt ctccaaaaat cattatagct gttcttgcat gtatatcttc
     3961 atcgttagca aaagcattta aaagtttttc atcttcgcta aaatgcgcaa gcattctcag
     4021 ttcgatttga gaataatcaa gagagataaa actaaatcca tctttagcta caaagcaaga
     4081 tttataatct tttgcgtatt gtccgtgtgc aggaatattt tgcaaatttg gatctttaga
     4141 tgaaaggcgt cctgtagcgg ttccagtctg taaaaaactt gaataaatgc gtgaattttt
     4201 atcttttaac gctagtttta acaaaggttc gcaataagtg gaataaagtt tggcaagttc
     4261 tctataatct aaaattttgg caattacagg atgtttatct aaaagtgcat ttaaaacttt
     4321 ttcatcggta gaatatcctg tttttccttt ttttccactt ggaagtttaa gtttttcaaa
     4381 aagtatatca cctacttgtt taggtgagtt taggttaaat ctatcctcac aaagagtata
     4441 aatttcttca cttaaatttt tgatttcatt ttcaaatttt ttcataagga tttcaagtgc
     4501 atttgtatca agctttatgc cattttcttc catcatcata atgattttaa tgaaatcaaa
     4561 ttcgcagttt ttagcaagtt ctagcaaagg agtttcaaga ttttttaaaa aataaagata
     4621 aaatcttaaa gtgatataag catcttccgc agcatatttg caagcttttt caagctctac
     4681 acttgcaaaa ttttctcctt ttttaacaag gctttcaaaa tgtaaggttt cataattaaa
     4741 aagtcttaaa gctaaatcat ccatatttac tcttaaagaa ggatttttaa gccatgctaa
     4801 aatcattgta tctgcgtatt tttgaggtaa atttaatcca aaattgtttt gaatgatttt
     4861 aaaatcatat ttgagattgt gtcctataac aaaatgatta aagattactt ctatagcttt
     4921 tttggcgctt tgcaatgaga tttgctcacc tactccaaga tagttatgag ttaaaggcac
     4981 gtaaaaagct tcattttcac tcatgcaaaa actaaaacca acaatttttg cttcttttgt
     5041 atcaagtcct gtggtttcgg tatcaaaagc aataatactt tctttatcaa gggtatttaa
     5101 aatttcaaaa agtttgtttt catcttgtat taaagtggct ttaaaaccta aatttttatc
     5161 tttattatca ggattttgac gcagtttttt aagcaaagta ttaagttcgt aatgttctaa
     5221 aatttcaagt atttttaaaa gaggttcttc atcaggataa gttgcttttt ctataagatc
     5281 ttgcacttct aaattttcat acaaagaggc taattttttg cttaaaaatg cattttcctt
     5341 accctctaaa agcaaattac gacttctttc gttgcgtact agggttaaat tttcataaat
     5401 tccttctata ctaccaaatt catcaagtaa ggttttagcc ccttttgcac ctataccttt
     5461 aacgcctgga atattatcag aactatctcc gcaaagagct aaaaaatctc tgatttgatg
     5521 aggttttact ccgtattttt ctaaacacgc tgcttcatca tagtcgtttt tagaaatagg
     5581 actgtaaatg cttgttttac catcttttat gagttgataa agatctttat cttgagtgat
     5641 aatgcgtaca aaaatatccc tatcttcaca agttcttaca aaagaagcga tgatatcatc
     5701 ggcttcataa ccttcttgag aaacgcttat aaaacccatt ttttctatca tctctatgca
     5761 aattggaatt tgttctagaa gttcaggtgg tggtggagtg cgattttgtt tatagtttgg
     5821 atcaatttcg ctacgaaaag tttttccttt ggagtctaat gcaaaaacaa tataatcact
     5881 tttatgttca ttttttaagc tataaataaa atttgcaaaa ccgctaatca ttccactagc
     5941 ttgtccttgt gaatttttaa aaccttttaa tgcgtagtaa agtctgaaaa aaaatccaaa
     6001 agtatcgata atagttaaag ttttcataat aatttcttct ttaataaaat atatttttaa
     6061 gctgtattat ttcaaaattt tgcttaaaat gtctacaatt taagatcttt aagcaaaaac
     6121 actgcaattt ttagccataa ttacaaatta tttataaaaa aatatattaa aatataagga
     6181 taatgtaatg acaaatcagc aaattgatgg aattgcggat aagaatttta atacacctga
     6241 aggtaggaaa gtttttaaaa aggcagtttt ttcttgctgg ttgggaactg ctatggaata
     6301 tgcagatttt gcactttatg gtttagcagc tgcaacaatt ttttcagaag tattttttcc
     6361 tgagcaaact ccagtaatcg cacttttgct tagttttgta acttatggca taggttttat
     6421 tgcaagacct attggggctt tgttttttgg ttatttaggt gataaacatg gaagaaaaaa
     6481 tgttatgatg agtactgttg ctttaatggg aatttcaact actctcatag gttttattcc
     6541 aagttatgca gtaattggtg tttgggcgcc tatttgtttg gttatattac gttttatgca
     6601 aggttttggt gcaggagctg aactttcagg tggaacagtt atgctaggag aatatgctcc
     6661 tagcaagaga agagggcttg tttcttctgt gattgcttta ggatcaaata gtggaacttt
     6721 acttgcgtct tttgtgtggc ttttgatggt gcaaatggat gaggcaagtt ttaaagaatg
     6781 gggttggaga gttcctttta tgggaagtat tttaatcgct ctttttgctg tatatattcg
     6841 ttttcatgtc aaagaaaccc ctgtttttga aaagcaaaaa aatgaaatga tgaaattgcg
     6901 tcttaataac gaaaagcata tgaaaaaaga tgaaagaagt ttttggcaaa gaagtcgtgc
     6961 tttttggact atggtgggct taagaatagg tgaaaatgga ccttcttatc ttgcgcaagg
     7021 ttttattgta ggttatgtga ctaaaatttt acttttagac aaatcagtag ctactacagc
     7081 agtgatgata gcttcattgg tgggtttttt ggttattcct ttggcaggtt atttaagtga
     7141 tagatttgga agacgtatta cttatagaat gttttgttta cttttgatga tttatgcttt
     7201 tcctgctttt atgcttttag atagtaaaaa tgaaattatt gtgattttaa ctattattgt
     7261 aggtatgtct ttagcatctt tagggatttt tggtgtacaa gcggcttggg gtgtagaact
     7321 ttttggggta aaaaaccgtt atacaaaaat ggcttttgct aaggagctag gttctattct
     7381 ttcaggagga acagcgccta tggtggcttc tgctttgctt gcgtattatg gcacttggtg
     7441 gcctattgcg acatattttg tattaactgc aggtataggt tttgtgacta cattttttgc
     7501 gccagaaact agaggtagag atttaaataa aatagaagat gcgatatgag acttatctta
     7561 gacacagata taggcaatgc tattgcagga gcaaataccg atgatggttt agcgcttgct
     7621 ttgattttgg catctaaaga aatcaaactt gaaatgctaa gcacggtttg cggtaatgtt
     7681 ccaagccttg ttgcctatag tgtggctaag gatttattta aacgtttaaa tttaaatatt
     7741 cctgtttatt taggagcgaa tgaagcccta aaagaaccaa gtaaagcttg gcgtcaaaga
     7801 cttgatgaaa gtgtaaaaaa ttttaaactt gaatatcttt gggaaaatat aaaaagtccc
     7861 gaaattttag aaaatataaa tcctgatgcg atttttaaaa tgggtgagtt ggtgagtaaa
     7921 aatcctaaag aaatttctat ttgtgcgata ggacctttga caaatatcgc tatgactatg
     7981 aaaattttta aagattttga tataaatctt aaagagcttt ttattatggg cggtagtttt
     8041 gatatgcctt attatactaa agatacaaat tttggtttcg atcctgaggc ggctagtata
     8101 gtgttaaatt caagagctaa aattacactc gtgccttata atgcaaccat gcagacttta
     8161 ttaacacacg aggatttaaa agagttgcaa ggtaagaata ttttatgtga ttttatcgtt
     8221 gaaactttag gtgtttggat tgattatgct tctaaaacac gtggtacaaa gggaacttgg
     8281 atacatgacg ctttaacgat agcttacgca ttagattcta gtattgcaga ttttgatgag
     8341 tgttatgctg atgttatttg cgatagttct ttggcaagag gtatgagttg gcgttgtttt
     8401 aaagagccaa aaatgagtat gggggtggat ttaagcacta aaaattgtgt taaaatttta
     8461 aaaaatgtag ataatacaaa gcttttaaaa cttataaaag agaggctttt aaaaggagtt
     8521 tgctatgaaa attatgaaag cataacgact taattttcca agtaagataa aaaatatagt
     8581 ttttaaaaaa gaatatttcg caaaaccaag tcccaaggca aaaagatctc ccaccaaagg
     8641 taaaaaagta aaaaaagcaa atatacttcc aaatttagca aaattagcat tgaaattttc
     8701 taattttttc aaggatttgc taaagtattt ttctaaaatt ttttgcttac caagataagc
     8761 caagccataa gtacttaaac ttcctaaggt attacccaaa gtagctacga taagcactaa
     8821 atttggatta aaatcaagtt ttataaagcc taaaacaaag gcttcgcttg ccaaaggtaa
     8881 tagtgtgctt gaaagaaaac acactataaa aagtcctaaa taacttatat cattatataa
     8941 aaaatcaaac ataaaattat gatttttgtg tatttttaag ctctaagtct agataatatc
     9001 ctgtgtaaga acgggttttt ttgtgttctt tagcgacttt ttccacgctt cctgtgctta
     9061 taacttttcc acctttaact ccgccttcag gccccatatc gatgatataa tcagcatttt
     9121 taatcacatc caaattatgc tctattacaa aaaccgaatt tttaagatca accaaatgtt
     9181 gtaaaactaa gatgagttta ttgacatctt caaaatgcag tcctgttgta ggttcatcaa
     9241 gtatataaag cgtttttcct gtatcgctac ggcttagttc tttagcaagt ttgattcttt
     9301 gtgcttcacc tccacttaag gtggtggcat tttgtcctag ggttagatag tctaaaccca
     9361 cttttactag agtgtctaat ttttgcttga ttttaggaac ggctgtaaaa aattcactcg
     9421 cttctaaaac actcatattt aaaatttcac tgatattttt gcctttatat ttgatttcta
     9481 gcgtggcatc attgtagcgt ttgccctgac aagtatcaca aactaccata acatcaggta
     9541 aaaaatgcat ttctattttg atttctccat ctccgctaca cttctcacat cttccacctt
     9601 taacattaaa agaaaagcgt cctgctttat aaccacgcat tttagcttct ttagtggcgg
     9661 caaaaagatt tctgatttca tccatagcac ctgtataggt ggcaggattt gaacgtggtg
     9721 tgcgtccaat tgggctttga tcaagataaa tgactttatc aagtttttca agtccttcta
     9781 tttgcacccc accaagtttt ttaacttttt tagcgcggtt taattcctct tgtgcaaaag
     9841 gaagtagggt ttgaagtatc aaagaacttt ttccagaacc tgaaactcct gttatagcga
     9901 ctaaattttg taaaggaaat tttacgctta aatcttggat attgttaata tttacatttt
     9961 taagttcaag ccattctttt tgtgctctgt tttgaagttg tgaaatttgt tttttaccat
    10021 tcatataaag tgcagtttcg cttttgcttt ttaaaagttc tttataagtt ccactaaata
    10081 caacctcacc tccaaatttt cctgcttttg ggccaatatc tacaataaaa tctgcttctt
    10141 ctatagtcat tttatcatgc tctacgacaa ttagggtatt gcccttttgt tgtaaatttc
    10201 ttaaagtttt aatcagtttt gcagtatctc tttcatgaag tcctatgcta ggctcatcta
    10261 agacatacat cactccactt aaaccactgc caatttgtga agctatgcgg attctttgtg
    10321 cttcaccccc actaatcgtt cttgcatcgc gccctaagga aagataacct agccccacat
    10381 catacaagaa aaacaatctt tcgttgattt cttttaggat aggtttagaa ataagttttt
    10441 gttgctcgct taaataggaa aaatttttct catctgcaaa aaaggccgta ctatcttcta
    10501 tgctcatatc taaaatttca cccaagcctt ttttggctac tttcacggct aaactttcgg
    10561 gttttaaacg atgcccaccg cagtctttac aaattttttc actcatatat tcggctaaat
    10621 ctttttcatc ttttagcatt tcataagcca ttttaaccac gccttcaaag gtgcgtttta
    10681 gacgatttct tttccaaaga aattctatag ttttggcatt accatacaat acaagacgtt
    10741 tttgttcttc gtttaattgc ataaaaggta ttttgatagg aatttcattt tgttcgcaaa
    10801 aggcgattag gaatttataa taataacttt tgttaaaacc atacatgatt ttaacagcac
    10861 cattttcgag gcttaaattt tcatcgataa tttttttcat atctaaagta taacgaatgc
    10921 caagtccatc acaagcttcg catgctcctt ttggagaatt aaaagaaaag cttaaaggtt
    10981 caagtggaac aaaggaaatt ttacaatcaa aacaagcgca gtgttcgcta aaatgatagt
    11041 gtttattaag gtttatttcc tcatgattta aaacttctat ttctatttct ccaaagcttt
    11101 cttgtaagcc tttttctata tcgcttgcaa gacgagaaag taaatcttct tgaatttcaa
    11161 gcctatctat gacaagttta atggtgtgtt ttttggtttt ggccagttca atttcttcat
    11221 caagtcttac taaaactcca tcaatttgag ctcttacata gcctttgttg cgtaaatttt
    11281 caagtaaatc tgcataagtt cctttttttt ctcgtatgag tggagcgtag atgatgattt
    11341 ttgcaccttt tggaaatttt aaaatttcac tgactatatc acttgcactc atagatgaga
    11401 ttttttgtcc acattgatga caatgttgaa tgcccactct tgcatataaa agtcttagat
    11461 aatcataaat ttcagtgatg gttcctacag tagagcgtgg gtttttagaa gtggtttttt
    11521 gatctatagc aatggctggg gttaaacctt cgattttatc gacatcaggt ttgcctacct
    11581 tatctaaaaa ttgtctggca taagcactta aactttctat ataacggcgt tgtccttcgg
    11641 cataaagagt gccaaaagca agggttgatt ttccactccc actcagtcct gtaaaaacaa
    11701 tgagtttgtt tttgggaatt tcaaggtgga tattttttag gttattttct cttgcaccaa
    11761 tgatttttat ggtatcgttc atagtctttc ctaaacatta aataaattta agattttagc
    11821 ataataatat taaaagaact tggataaatc caagttaaaa atttataaga tttagcttat
    11881 taagtaaaga gtgggtggtt ccaagtattg ataaggcata tacgcaaagt aaaatttttc
    11941 tatgagctga aatatgcatt ttttctatga ttttaattcc tataaaaact ccaaccatag
    12001 aagctatacc tactagtatt cctttatgaa taacttcaga gtctataact ccagaatttg
    12061 aaaaagatat aataccagag actgaagcaa aaataacaaa aaacaaggat aaagaaacaa
    12121 cttttttact atcatagcct aaaaaataag ctaaaatcgg agcaattaaa agtccaccac
    12181 caattcccaa agaaatagca aaaataccag taaaagctcc agcaataaat aaaatgacat
    12241 tctttaccca aacgcttctt tgattttgca caatgttttc tttaattcca aaagcatatt
    12301 tgataaaaaa tatacaactt accgccaaaa atacgctagt aagagctaca tcacttaaag
    12361 cttttaaaag cattccgcta aagcttgccc ctatgagtcc tccaaaacct atcataatac
    12421 catctttaag atttagattt tttttcttat aattaatata agagccaaaa actgctgcaa
    12481 aaatcatttg caatactgaa attccgatag catggtgagc acttgctcca agtgcgaaca
    12541 tagaaggaac gataatcata cctccaccaa tgccaaaaag tccagaagca atacctgaaa
    12601 tgattcctat gattagataa ggtaaatctg tgatttccat agcttttcct aaaaaatatt
    12661 aaatatttca aatacggaat aattttatct tattaagcta agtattatct tagtttttta
    12721 taacaataga atattttttg gtaactttaa gcatcgtaaa aatgtttcaa aatat
//
LOCUS       DAPWGO010000045        12310 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.046, whole genome shotgun sequence.
ACCESSION   DAPWGO010000045 DAPWGO010000000
VERSION     DAPWGO010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12310
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.046"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(69..521)
                     /locus_tag="RJ336_001104"
     CDS             complement(69..521)
                     /locus_tag="RJ336_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDZ5213555.1"
                     /translation="MFKVYYKMPLCYLSLHSDGKFLTRVDFCDNKRSEKNCSLLDLVK
                     YELDLYFTHKLRKFSIPVLIQGTDFESKVYKALMKIPYGKIATYKDIAEKINHPKAFR
                     AVGNANSKNQIPIFIPCHRVIASNGIGGYNGGLEIKRFLLENEGVNLK"
     gene            576..3122
                     /locus_tag="RJ336_001105"
     CDS             576..3122
                     /locus_tag="RJ336_001105"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDZ5213556.1"
                     /translation="MSFMQEYNKLVEERAALGIPPLPLNANQTKELCKLLENENNEEL
                     ANLLENRVNPGVDDAALVKCEFLNSILKGKISAPNIDKKRALRMLGTMLGGYNVKVLI
                     DALKDENIAKDAAEVLKNIIFVHDNFHTIAELSKNNPHAREVLQSWANADWFNKKEKL
                     PQVIKCIVFKVAGETNTDDLSPAGDAFTRSDIPLHANAMLKVRQAGSLEKIKELKKSG
                     REVVYVGDVVGTGSSRKSAINSIQWHLGKEIEGVPNKHSGGIVMGSTIAPIFFNTAQD
                     SGALPIICDVINLEMGDEFEIHPYEGKIIKNGSTIAEFTLSPNTLLDEVRAGGRIPLI
                     IGRGLCAKAREFLGMESENIFTKPEQPKSSSGGYTLAQKMLGRACGVEGVRPGMYIEP
                     MTLTVGSQDTTGPMTRDEIKELASLGFNADFVMQSFCHTAAYPKVSDSNLHKTLPNFM
                     TSRGGVSLKPGDGVIHSWLNRFVLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAVTG
                     SMPLNVPESVLVRFSGELQAGVTLRDLVNAIPYYAIKQGQLTVEKKNKKNIFAGKILE
                     IEGLPNLKVEQAFELSDASAERSAAACSVDLSIESVSEYIKSNISLIEAMIEAGYENK
                     ATLVRRAEKMREWLKNPTLLRADKDAKYAYIIDINLNDIKEPILACPNDPDDVATLSE
                     ILADNKRPKNIDEVFVGSCMTNIGHYRALGEILKDKGILKTRLWVVPPTKMDKAQLTN
                     EGYYSIFGAAGARIEVPGCSLCMGNQARVNDGAVVFSTSTRNFDNRMGMGAKVYLGSA
                     ELAAVCAILGKIPSKEEYLQIVSEKLSDEHKANIYRYLNFNEIENFKLEN"
     gene            3182..4420
                     /locus_tag="RJ336_001106"
     CDS             3182..4420
                     /locus_tag="RJ336_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDZ5213557.1"
                     /translation="MKLLFTSFCCFASLMASDAINCDNIKNNKTLLNESSNLDYLNIA
                     SSCKESLKNQDFTKKLYAISNEIRGSNSSCNGVAYLPKLQQFDFLLLKIAIDPITYQK
                     TLDTPENLEKKYDILKSYFRYWAYQSIGNFRLYKAFWQEYNNAIEPLEKYFESNFNFD
                     KGSNIYYTSNALNEFLNWAVGETKIYKDISPLAKIMSNKNYSVSYIQDFIFSNNPSQD
                     DLTIALQAALLNQREKEILELLIRFGARIDEGYESAIFYALENYENTNFLIQNGANVN
                     QANAFGKTPLFYAIEFNRLDIIKLLLDNGANVNQKYINNNEKLALSANIGSNTPYFIT
                     FCALEHTSKNVLMHAAAYGNVEILKLLISKGANLNAVDDLGFNALDFALAAGKKENAD
                     YLKSLGLKANENLFYGGSLE"
     gene            4417..5166
                     /locus_tag="RJ336_001107"
     CDS             4417..5166
                     /locus_tag="RJ336_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDZ5213558.1"
                     /translation="MKTAFITGASSGFGRACVEAFIQKGYKVIALARRKERLEELKNS
                     HKDKIYTLCIDVRNQKEIFEAIENLPKEFQEIDVLFNNAGLALGVDEFDKLNLEDINT
                     MVDTNIKGFLYVAKVVIPILRKQKNAYIFNLGSVAGRNPYFGGNVYCGTKAFVGQFSL
                     ALRNDLRGSNIKVTNIAPGLCKTEFSEVRFKGDIQKADAVYENTQFISANDIAKVVMS
                     IINLPSHINVNEIELMPVTQTWNGFYIERDE"
     gene            5163..6896
                     /locus_tag="RJ336_001108"
     CDS             5163..6896
                     /locus_tag="RJ336_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDZ5213559.1"
                     /translation="MNKFLVLLFLPLVAFANSSEAAANANLFGAFTLIPPLVAIALAF
                     ITKDVILSLFAGVLSGTFLLSLSANIFKAQHLAFVNFYNTAVESFSKIISYILGSTSD
                     PVNAGIILQILCIGGLVALITKMGGAKAVALKFAKRAKSAVSAQVNTWFLGLLIFFDD
                     YANLLIVGPIMRPLADKFKISREKFAFIIDSTAAPVAGIAVISTWIGLEVSLIKTAYE
                     HIGISDISAFGIFVETIPYRFYNIFMLFFVVMTAIMGREFGSMYKAEVRARTTGQIAP
                     LPKSGTLDTAELEDQFLAPKEGIKIRAFDAIVPIFTLIILAILGFYFNGLSTLEGEEL
                     AKASANPLSFETFRAAFGNADSSVVLFQAALFAAIVAIFIGVRRKIFNLKEAVETWIY
                     GWKTMIFTIVLLLFAWSLSSIVKDLGTSLFITSLLADKLPEFILPATIFAFASAISFA
                     IGTSYGTMGILMPLAVPLAHEIAKINGMDANAMHHYMVINISCVLTGAIFGNHCSPIS
                     DNVILSSMSAKCDHMEHVRTQIPYALFICGISLIAGYIPVSLGLSVWFVLPLNFILIA
                     LLLRLIGKKVP"
     gene            6893..7966
                     /gene="trmA"
                     /locus_tag="RJ336_001109"
     CDS             6893..7966
                     /gene="trmA"
                     /locus_tag="RJ336_001109"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HDZ5213560.1"
                     /translation="MSLENFGNFLTLDEKHSFIKKYFKEFYTKDFKLFASKDKHYRTR
                     AELSFYHENDTLFYAMFDPKSKKKYIIEYLDFADEKICAFMPKLLEYLRQDNKLKEKL
                     FGVEFLTTKQELSITLLYHKNIEDIKSNLENLSNILHINLIARSKGKKLIFKTENLRQ
                     TLNIQDRKIFYEFNNDCFIQPNTTINEKMITWVCEILNTQKRMDLLELYCGYGNFTLA
                     LAPFFFKVLATEISKSNINFALKNCKLNNTTNIHFARLSSEELSLAIKKEREFFRLKD
                     IRLDDFNFSHVLVDPPRAGLDKSVIDLIKKYENIIYISCNPITLKENLKELSLTHRVE
                     EFALFDQFVNTPHLECGVFLSKV"
     gene            complement(7953..8369)
                     /locus_tag="RJ336_001110"
     CDS             complement(7953..8369)
                     /locus_tag="RJ336_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002956941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopD"
                     /protein_id="HDZ5213561.1"
                     /translation="MEEFYPYTLTIHLLCAILFIGYLFVDVFVLGVVKKKNPNFDKSL
                     FSATGVKIMPFVVLLLFLSGGALAGFHFKPLNLLFAVKIILAFGILSLVVFSLFCHFI
                     LKKKNPLGAFIHPFVFVLCIAIVILAKLMNYFFIPC"
     gene            8488..8901
                     /locus_tag="RJ336_001111"
     CDS             8488..8901
                     /locus_tag="RJ336_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HDZ5213562.1"
                     /translation="MNEKETISYIINASKNIAIFALSPDKTKASYRVAEFLQRKNYKI
                     FPIYPKEEFILNEKVYRNLDQIEEKIDTLILFRKGEVALEILPKLVEKNIKNLWLQLG
                     ISNETAKEECKKLDINFIQNRCIMLEYPHFKTKEK"
     gene            8901..10112
                     /locus_tag="RJ336_001112"
     CDS             8901..10112
                     /locus_tag="RJ336_001112"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HDZ5213563.1"
                     /translation="MLELNKIYKAKQQISEFVNKTPFIYSSFLSDICQSEIYLKNENL
                     QITGAYKIRGAYNKIANLSTEQKQHGVIAASAGNHAQGVAISAKKFGIKAVIVMPEST
                     PLLKVSATKALGAEVILKGDNFDEAYAFATSYAKENNLSFIHPFEDEFVMAGQGTLML
                     EMLDEISDLDMIIAPVGGGGLISGIASAAKQINPNIKIIGVGAKGAPAMYESFHAKKI
                     KNAKSVRTIADGIAVRDANPINFNIILECVDDFIQVDDEEIANAVLFLLEKHKIIVEG
                     AGAASVAALLHQKINTQNHKKIGVVLSGGNIDAQMLNIIIEKGLFKSYRKMQIHVTLV
                     DKPGALLHLTDSLKIANANIVKIDYDRFSTKLDYGDAMISITLETKGKEHQEEIRKIL
                     TQKAFNFYESF"
     gene            complement(10109..10834)
                     /gene="truA"
                     /locus_tag="RJ336_001113"
     CDS             complement(10109..10834)
                     /gene="truA"
                     /locus_tag="RJ336_001113"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDZ5213564.1"
                     /translation="MMKIKIIFSYDGSAFLGSATQPHKKGVQDALSGVLSHLGIVSPL
                     LMASRTDKGVHASYAVASVECGDHFVNLEYLQKQLNKFSHPFIHIKKIEKVKDDFEVR
                     FDVKSREYRYIFSHSSYSPFMASYVHFYPKFDLDKANELLGFFVGKKDLKFFCKSGGD
                     NKTTLREIFIARAYAYKDFSIFHFKANGFLRGQIRLSVASVLKVLEGKMSEKELKEQI
                     EAKKQYNHFLAPPNGLYLSRICY"
     gene            complement(10831..11856)
                     /locus_tag="RJ336_001114"
     CDS             complement(10831..11856)
                     /locus_tag="RJ336_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDZ5213565.1"
                     /translation="MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEI
                     SFLDLLKLYGFMLPRILIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKF
                     FLKIASLISAFMLVVALVMIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFI
                     EKQDSDKYENIIMYRPKHKADDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQS
                     IFSGEFDTLVVNTQFNTDNLQTKKFYEYWNDLNENPQRAREFVIYTTIALFPLASTLF
                     ALCFGLVTYRYEKGYVYLGMFGVIAIYFGLLSSFSQPPILACLGIFSLSLFVSAYCFK
                     KMILSRY"
     gene            complement(11856..>12310)
                     /locus_tag="RJ336_001115"
     CDS             complement(11856..>12310)
                     /locus_tag="RJ336_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDZ5213566.1"
                     /translation="LSLIDIKLKAVPQILLWSAFLFAFFYAFRESEILHFLIFKEFSG
                     GFLLNAFSFGGFVFLLKSLVFFLMNFRKKDEILENLGDADIIIMSCIGGILGFEYGFL
                     VLLIASILTLPFFIFFKIKAIKEQELAMIPFLNIAFVAVLFYKNLGLF"
BASE COUNT         4515 a         1892 c         1963 g         3940 t
ORIGIN      
        1 gtttaattct tgaaaattat gatatttttg aacaagaatt tgaaaacaaa gaaaatcaaa
       61 ccccaagctt attttaaatt cactccttca ttttcaagca aaaatctttt tatttcaagc
      121 cctccattat atcctcctat gccattactt gcaataactc tatgacaagg tataaaaata
      181 ggaatctgat ttttagaatt tgcatttccg acagctctaa aagcttttgg atgattaatt
      241 ttttctgcta tatctttata agtagctatt ttaccataag gaattttcat taaagcctta
      301 taaacctttg attcaaaatc tgtaccttgt atcaaaacag gaatgctaaa ttttctaagc
      361 ttatgagtaa aatataaatc aagttcatat tttactaagt caagcaaact acaatttttt
      421 tctgatcttt tattatcaca aaaatcgact ctagttaaaa attttccatc actatgtaaa
      481 gataggtaac ataaaggcat tttataataa actttaaaca ttttttatcc ttcaaagagc
      541 tacaattata ataaaaaata tttaaggagt agaaaatgtc ttttatgcaa gaatacaata
      601 aacttgttga agaaagagcc gctttgggta taccacccct tcctttaaat gcaaatcaaa
      661 ctaaagaact ttgtaaacta cttgaaaatg aaaataatga agagcttgca aatcttttag
      721 aaaatagagt aaatcctggt gttgatgatg cagctttagt aaaatgtgaa tttttaaatt
      781 ctatacttaa aggcaaaatc agtgctccaa atatagacaa aaaaagagcc ttaagaatgc
      841 ttggaactat gttaggcgga tataatgtta aagttttaat cgatgcttta aaagatgaaa
      901 acatagccaa agatgctgca gaagtgttga aaaatattat ttttgttcat gataattttc
      961 ataccatagc tgaacttagc aaaaacaatc cacacgctag ggaagtttta caaagctggg
     1021 caaatgcgga ctggtttaac aaaaaagaaa aattacctca agtgattaaa tgtatagttt
     1081 tcaaagtagc aggggaaaca aataccgatg atctaagccc tgcaggagat gcttttacaa
     1141 gaagcgatat tcctttgcat gcaaatgcca tgctaaaggt aagacaagca ggatccttag
     1201 aaaaaatcaa agagcttaaa aaaagcggtc gcgaagtagt ttatgtaggt gatgttgtag
     1261 gaacaggttc aagtagaaaa tcagcaataa attctataca atggcactta ggaaaagaaa
     1321 tagaaggtgt accaaacaag cacagcggtg gtatagtaat gggttcaacc atagcaccga
     1381 ttttctttaa cactgctcaa gatagtgggg ctttacctat catctgtgat gtaataaact
     1441 tagaaatggg cgatgagttt gaaattcatc cttatgaggg aaaaatcata aaaaatggct
     1501 ctacaattgc agaatttaca ctcagtccaa acactctctt agatgaagtt agagcaggag
     1561 gaagaatccc acttatcata ggtcgtgggc tttgtgctaa ggctagagaa tttttaggta
     1621 tggaaagtga aaatatcttt accaaacctg aacaacctaa atcttcaagc ggtggttata
     1681 ccttggctca aaaaatgcta ggtcgtgcct gtggagttga aggtgtgcgt ccaggtatgt
     1741 atatagaacc tatgacttta actgtaggct ctcaagatac tacaggtcct atgactagag
     1801 atgaaattaa agagcttgca agcctaggtt ttaatgcaga ctttgtgatg caaagctttt
     1861 gccatacagc tgcttatcca aaagtaagcg attcaaattt acataaaacc ttgcccaatt
     1921 tcatgacaag tcgtggtggg gtgagtttaa aaccaggtga tggggttatt cactcttggc
     1981 ttaatcgttt tgtattgcca gataccgtag gaacgggcgg ggattctcac acacgctttc
     2041 ctataggaat ttctttccct gcaggaagcg gacttgtagc ttttgctgcg gttactggct
     2101 ctatgccttt aaatgtaccc gaaagtgttt tagtacgttt tagcggagaa ttgcaagctg
     2161 gagttacctt aagagatttg gttaatgcta taccttatta tgcaatcaaa caaggacaac
     2221 ttactgttga aaagaaaaat aagaaaaata tttttgcagg aaaaatttta gaaatagaag
     2281 gcttgccaaa cttaaaagtc gaacaagctt ttgaactcag cgatgcaagc gctgaaagat
     2341 ctgccgctgc ttgtagtgtg gatttaagca tagaaagtgt aagcgaatat atcaaatcca
     2401 atatttcttt aattgaagct atgatagaag caggatatga gaataaagct acccttgtta
     2461 gaagggctga aaaaatgaga gaatggctta aaaaccctac tcttttaaga gcagataaag
     2521 atgcaaaata cgcttatatt atagatatta atcttaatga cattaaagag ccaatcctag
     2581 cttgtccaaa tgaccctgat gatgtggcaa ccttaagcga aattttagcc gataataagc
     2641 gtccaaaaaa tatagatgaa gtttttgtag gttcttgtat gacaaacata ggacattata
     2701 gagctttggg agaaatttta aaagataaag gcatacttaa aaccagactt tgggtagtgc
     2761 ctccaacaaa aatggataaa gcacaactta ctaatgaagg ttattacagc atctttggtg
     2821 cagcaggtgc tagaatagaa gttcctggtt gttctttgtg tatgggtaat caagctagag
     2881 taaatgatgg agctgtagtt ttctcaactt ctacaagaaa ttttgacaac cgtatgggaa
     2941 tgggtgctaa agtatattta ggcagtgcag aacttgcagc agtttgtgcg attttgggta
     3001 aaattccaag caaggaagaa tacttacaaa ttgttagcga aaaactaagt gatgagcata
     3061 aggcaaatat ctatagatat ttaaatttta atgagattga aaatttcaaa cttgaaaatt
     3121 aattcaaatt taatacttat ttggattaaa taacaaaatt aaaattttca aaggaaaaat
     3181 attgaagtta ttattcactt ccttttgttg ttttgcaagt ttaatggcta gcgatgccat
     3241 taactgcgac aacattaaaa ataataaaac attgctaaat gaaagttcaa atttagatta
     3301 tttaaatata gcttcaagct gtaaagaatc tttaaaaaat caagatttta caaaaaaact
     3361 ctatgcgatt tccaatgaaa ttcgcggaag caatagctct tgtaatggtg tggcttattt
     3421 gcccaaatta caacaatttg attttttatt attaaaaata gccatcgacc ccatcactta
     3481 tcaaaaaact ttagatacac ctgagaattt agaaaaaaaa tatgatattt taaaatctta
     3541 ctttagatat tgggcatatc aaagtatagg aaattttaga ctttacaaag ctttttggca
     3601 agaatacaat aacgctatag aacctttaga aaagtatttt gaaagtaatt ttaattttga
     3661 caaaggtagc aatatttact atactagcaa tgccttaaac gaatttttaa attgggctgt
     3721 tggagaaaca aaaatttaca aagacattag tcctttagca aaaatcatgt caaataaaaa
     3781 ttattcggta tcttatatac aagattttat tttttcaaat aatccaagtc aagatgatct
     3841 tactatagcc ttacaagcag cgcttctaaa tcaaagagaa aaagaaattt tagaactttt
     3901 gattcgtttt ggcgctagga ttgacgaagg ttatgaaagt gctatttttt acgcattgga
     3961 aaattatgaa aatacaaatt ttttaatcca aaatggagcg aatgttaatc aagccaatgc
     4021 ctttggtaaa actccgcttt tttatgccat agagtttaat cgtcttgata tcataaaact
     4081 acttcttgat aatggagcaa atgttaatca aaaatatatt aataacaatg aaaaattagc
     4141 attaagtgcg aacataggtt caaatacgcc ttattttatt acattttgtg ctctagagca
     4201 cacttcaaaa aatgttttaa tgcatgctgc agcttatgga aatgttgaaa ttttaaaact
     4261 tcttatctca aaaggagcaa atcttaacgc tgttgatgat cttggtttta atgcacttga
     4321 ctttgcgcta gcagcaggca aaaaagaaaa tgctgattat ctaaaaagct tgggtttaaa
     4381 agcaaatgaa aatctatttt acggaggtag tttagaatga aaaccgcatt tattacagga
     4441 gctagttcag gttttggtag agcttgcgtt gaagctttta tacaaaaagg ctacaaagta
     4501 atcgcccttg ctagacgcaa agagcgtcta gaagagttaa aaaattctca caaagataag
     4561 atttacacgc tttgcataga tgtaagaaat caaaaagaaa tctttgaggc tattgaaaat
     4621 ttacccaaag aatttcaaga aattgatgtg ctttttaata atgcaggctt agctttaggg
     4681 gtagatgaat ttgataaatt aaaccttgaa gatattaaca ctatggtaga tacaaacatc
     4741 aaaggatttt tatatgttgc aaaagttgtt attcctatac ttcgtaaaca aaaaaatgct
     4801 tatattttta acttaggttc ggttgcagga cgcaatcctt attttggagg caatgtgtat
     4861 tgtggaacca aagcctttgt aggacaattt tcattggcct taagaaatga tcttagagga
     4921 agcaatatca aagtaacaaa cattgctcca ggactttgca aaactgaatt tagtgaagtg
     4981 cgttttaaag gagatatcca aaaagctgat gcagtgtatg aaaatacgca atttatcagt
     5041 gctaatgata ttgccaaagt ggtaatgtct attattaacc taccaagcca tattaatgtt
     5101 aatgaaatcg agcttatgcc ggtaacacaa acttggaatg gattttatat agaaagagat
     5161 gaatgaataa atttttagtt ttattgtttt tacctttagt tgcatttgca aactcctcag
     5221 aagcagctgc aaatgctaat ttatttggag cttttacgct tataccgcct ttagttgcta
     5281 ttgctttagc ctttatcaca aaagatgtta ttttgtcact ctttgctgga gttttaagcg
     5341 gaacttttct acttagcctt tctgcaaata tttttaaagc acaacattta gcttttgtaa
     5401 atttttataa taccgcagta gaatcttttt caaagattat ttcttatatc ttaggttcaa
     5461 cttcagatcc agtaaatgca ggaatcattt tacaaattct ttgtataggt ggtcttgtgg
     5521 cacttatcac aaaaatgggt ggtgcaaaag ctgtagcatt aaaatttgcc aaaagagcca
     5581 aatcagctgt atcagctcaa gttaacactt ggtttttagg gcttttaata ttttttgatg
     5641 attatgctaa tttactgatc gtaggtccaa ttatgcgtcc tttggcggat aaatttaaaa
     5701 tttctcgtga aaaatttgcc tttattatcg actctaccgc agctcctgtg gcaggaatag
     5761 ctgtaatttc tacttggata ggcttagaag tttctttaat taaaaccgct tatgaacaca
     5821 taggcattag cgatattagt gcttttggaa tttttgtcga aaccatacct tatcgttttt
     5881 ataatatctt catgcttttt tttgtagtca tgactgcaat catgggacgt gagtttggtt
     5941 ctatgtacaa ggctgaagtg cgtgcaagaa ccacaggaca aattgcacct ctacctaaat
     6001 caggcacact agatactgct gaattagagg atcagttttt agcgccaaaa gaaggtatta
     6061 aaattcgtgc ttttgatgct attgttccta tttttacttt aatcatttta gctatattag
     6121 gattttattt taatggactt agcactttag aaggcgaaga acttgcaaaa gcaagtgcca
     6181 atcctttgtc ttttgaaact tttagggctg cttttggaaa tgctgattct tctgtggtgt
     6241 tattccaagc tgctttgttt gctgctattg tagcgatttt tatcggggtg cgtcgtaaaa
     6301 ttttcaatct taaagaagcg gtagaaactt ggatatatgg ctggaaaacc atgattttta
     6361 ccatagtatt gcttttattt gcttggtcgc tttcaagtat agtaaaagat ctaggaactt
     6421 ctttatttat cactagtttg cttgcagata aattgcctga gtttattttg cctgctacta
     6481 tttttgcttt tgcttcagcc atttcttttg ccataggaac aagctatgga actatgggga
     6541 ttttaatgcc tttggctgtg cctttagctc atgaaatcgc caaaatcaat ggtatggatg
     6601 caaatgctat gcatcattat atggttatta atataagctg cgttttaaca ggtgcgattt
     6661 ttggaaacca ttgctcacca atttcagata atgtaatcct ttcatctatg agcgcaaaat
     6721 gcgatcatat ggagcatgta agaacacaaa ttccttatgc tttatttatc tgtggtattt
     6781 ctttaatcgc tggatatatt cctgtatctt taggacttag cgtttggttt gtcttgcctt
     6841 taaatttcat acttattgcg cttttactaa gactcatcgg aaagaaagtt ccatgagtct
     6901 tgaaaatttt ggaaattttc tcactttaga tgaaaaacac tctttcataa aaaaatattt
     6961 taaagaattt tatacaaagg attttaaact ttttgcctca aaagataaac attatcgtac
     7021 aagagctgaa ctttcatttt atcatgaaaa tgatacgctt ttttatgcaa tgtttgatcc
     7081 aaaaagcaaa aaaaagtaca ttatagaata tttagatttt gctgatgaaa aaatttgtgc
     7141 ttttatgcca aaacttctag aatacttgcg tcaagataat aaattaaaag aaaaactttt
     7201 tggtgtagaa tttttaacca caaagcaaga acttagcata accttactct atcataaaaa
     7261 tatagaagat ataaagtcaa atttagaaaa tttaagcaat attcttcata tcaacctcat
     7321 agcaagaagt aaaggcaaaa aacttatttt taaaacagaa aatctaagac aaactttaaa
     7381 tattcaagat agaaaaatat tttatgaatt taacaacgat tgttttattc agcctaacac
     7441 tactataaat gaaaaaatga ttacttgggt gtgtgaaatt ttaaatactc aaaaaagaat
     7501 ggatttactt gagctttact gtggatatgg aaattttact ttagctttag caccattctt
     7561 ttttaaagtt ttagccactg aaatttcaaa aagtaatatt aattttgctt taaaaaattg
     7621 caaacttaat aatacaacaa atatccactt tgcaagactt tcaagcgaag aattaagtct
     7681 tgctatcaaa aaagaaagag aattttttcg tttaaaagat attcgattgg atgattttaa
     7741 tttctctcat gttttagttg atccaccccg tgcaggactt gataaaagcg taattgactt
     7801 aataaaaaaa tatgaaaata ttatttatat ttcttgtaat cctatcactt taaaagaaaa
     7861 tttaaaagaa ttaagcctaa cacatagagt ggaagagttt gctctttttg atcaatttgt
     7921 caatactcca catcttgaat gcggagtatt tcttagcaag gtataaaaaa ataattcatt
     7981 aatttagcca gtattactat cgcgatacaa agcacaaata caaaagggtg gataaaagca
     8041 ccgagtggat ttttcttctt taatataaaa tgacaaaata aagaaaaaac aactaaagat
     8101 aaaattccaa aagccaaaat aatttttaca gcaaaaagta aatttaaagg tttaaaatga
     8161 aaacctgcca aagcacctcc gcttaaaaaa agcaaaagaa ccacaaaagg cattatttta
     8221 accccagtag cactaaaaag acttttgtca aaattaggat ttttcttttt aactacgccc
     8281 aaaacaaata catcaacaaa caaataacct ataaacaaaa tagcacaaag aagatggatt
     8341 gttaaagtat atggataaaa ttcttccatt tttccctcct tattaaactt cggaatttgc
     8401 tatattataa cacttttttc attttttgaa ttcactttag ttaatttttt aatcatttaa
     8461 gataaaatac caaaacaaag gttaacaatg aatgaaaaag aaactatctc ttatattata
     8521 aatgcaagta aaaatattgc catatttgcc ttaagtccag ataaaacaaa agcttcttat
     8581 agggtagcag aatttttaca aagaaaaaat tataaaattt ttcctattta tcctaaagaa
     8641 gagtttattt taaatgaaaa agtttataga aatttagatc aaatagaaga aaaaatcgat
     8701 acacttatac tttttagaaa aggcgaagtg gcactagaaa ttcttcctaa gcttgttgaa
     8761 aaaaatatta aaaacctatg gcttcaactt ggtattagta atgaaacagc caaagaagaa
     8821 tgtaaaaaat tagatataaa ttttatacaa aatcgttgca ttatgctaga atatccgcat
     8881 tttaaaacaa aggaaaaata gtgttagagc ttaataaaat ttacaaagca aaacaacaaa
     8941 tttcagagtt tgtaaacaaa actcctttca tatactcttc ttttttaagt gatatttgtc
     9001 aaagtgaaat ttatcttaaa aatgaaaatt tacaaattac aggtgcttat aaaattcgtg
     9061 gagcttataa taaaatagcc aatcttagca ctgaacaaaa acaacatgga gtcattgccg
     9121 caagtgcggg aaaccatgct caaggcgtgg ccattagtgc aaaaaaattt ggcattaagg
     9181 cagttattgt aatgccagaa tccactccgc tcttaaaagt ttctgctaca aaagccttag
     9241 gagcagaggt gatactcaaa ggggataatt ttgatgaagc ctatgccttt gcaacctctt
     9301 atgctaaaga aaataatctt agctttattc atccttttga agatgaattt gtaatggcag
     9361 gacaaggaac tttgatgctt gaaatgcttg atgaaataag cgatcttgat atgattatcg
     9421 cacctgttgg aggtggagga cttataagtg gtatcgcaag tgcagctaaa caaatcaatc
     9481 caaacattaa aatcatcggc gttggagcca aaggagctcc tgcaatgtat gaaagttttc
     9541 atgctaaaaa aatcaaaaat gcaaaaagcg tacgcactat agccgatggt attgctgtgc
     9601 gtgatgcaaa tcctattaat tttaatatta ttttagaatg cgtagatgat tttatccaag
     9661 ttgatgatga agaaatcgct aatgcggtat tgtttttact tgaaaaacat aaaatcatag
     9721 ttgaaggcgc aggagctgcg agtgtagctg ccctgcttca tcaaaaaata aatacacaaa
     9781 atcataaaaa aattggcgta gttttaagcg gaggtaatat cgatgcacaa atgctaaata
     9841 tcatcataga aaaaggttta tttaaatcct atagaaaaat gcaaattcat gttactttag
     9901 tagataaacc tggggcatta ttacacctta cagacagctt aaaaatagcc aatgcaaata
     9961 tagtaaaaat cgactatgat agattttcca ccaagcttga ttatggcgat gcgatgattt
    10021 caattaccct agaaaccaaa ggtaaagaac atcaagaaga aataagaaaa attttaaccc
    10081 aaaaggcctt taatttctat gaaagttttt aataacatat acggcttaaa taaagcccat
    10141 ttggcggtgc taaaaagtga ttgtattgct ttttagcttc aatctgttct ttgagttctt
    10201 tttcactcat ttttccttct aaaaccttta aaacacttgc tacgcttaat ctaatttgcc
    10261 ctcttaaaaa accattagct ttaaaatgaa aaatgctaaa atctttataa gcataagctc
    10321 tagcaataaa aatttctctt aaagtcgttt tattatcccc tccacttttg caaaaaaact
    10381 ttaaatcctt ttttcccaca aaaaaaccca aaagctcatt agccttatct aagtcaaatt
    10441 taggataaaa atgtacataa gaagccataa aaggactata agaagagtga gaaaatatat
    10501 agcggtattc tctacttttt acatcaaatc ttacttcaaa atcatctttt actttttcaa
    10561 tttttttgat atggataaaa ggatgggaaa atttattaag ctgtttttga agatattcta
    10621 aatttacaaa atgatctcca cattctacac tagctacagc atagcttgca tgcactcctt
    10681 tatctgtacg agaagccatc aaaagaggtg aaacaatacc caaatgcgat aagaccccac
    10741 ttaaagcatc ttgaacacct tttttatgag gctgagtagc agaacctaaa aaagcagagc
    10801 catcataaga aaatataatt tttattttca tcaataacga ctcaaaatca ttttcttaaa
    10861 acaataagcc gaaacaaata aacttaaaga aaaaattcca aggcaagcca aaattggagg
    10921 ttgagaaaaa gaacttaaaa gtccaaaata tatagcaatc actccaaaca tacctaaata
    10981 cacatagcct ttttcataac gataagtaac caaaccaaaa caaagcgcaa aaagcgtact
    11041 agcaagtgga aacaaggcta tagttgtata aatcacaaat tctcttgctc tttgtggatt
    11101 ttcgtttaaa tcattccagt attcataaaa tttctttgtt tgaagattgt ctgtattaaa
    11161 ctgagtattt actactaaag tgtcaaattc tccactaaaa atactttgac cttgctcaaa
    11221 attatacatt ttgccttgat ttaagctaaa agcaaagcta tcatcttttc tttgcacatg
    11281 cgcttctttg gctatgataa gttgttcttt atcatctgct ttatgtttag ggcgatacat
    11341 aattatgttt tcatacttat cactatcttg tttttctata aaaatcatcc agtctaaaaa
    11401 tttttgccca aattctcctg ttttgtagtt aaatttcact tgagtgcttt tatagtttac
    11461 aaagttatcc tgaagttcaa atactatagg tatcattacc aaagccacaa caagcataaa
    11521 agcactaatc aagcttgcaa ttttaaggaa aaattttgcc aaaatcattg gtgaaaatcc
    11581 caaagtaaaa agtactatgc tttcattttc cttagaaagc ctaaacaaag ccaaagttaa
    11641 agaaataaaa aaagatatag gcaaggtaaa aattaaaatt ctaggcaaca taaacccata
    11701 aagctttaaa agatccaaaa aactaatctc tatgcttgaa gtaagttttg caagttgaat
    11761 aaaaaacacc atagatacaa tagcaaaaag tacgaaaaat atagacaaat tcgtacttaa
    11821 aaattgattt aaaacatatc ttaaactaag cttcattaga ataatcctaa gtttttataa
    11881 aataaaactg ccacaaaagc gatatttaaa aagggtatca tagcaagttc ttgctctttt
    11941 attgctttaa ttttaaaaaa aataaaaaaa ggcaaagtta aaatagaagc tataagtaat
    12001 actaaaaatc catactcaaa acctaaaatt ccacctatac aagacataat gataatatca
    12061 gcatcaccca aattttctaa aatttcatct ttttttcgga aattcattag aaaaaaaacc
    12121 aaacttttta ataaaaaaac aaatcctcca aaactaaaag catttagcaa aaaacctccg
    12181 ctaaactctt taaaaatcaa aaaatgtaaa atttcacttt ccctaaaggc gtaaaaaaaa
    12241 gcaaataaaa aagcgctcca aagtaaaatt tgtggtacgg ctttgagttt aatatcaatt
    12301 aaagaaagca
//
LOCUS       DAPWGO010000046        12000 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.047, whole genome shotgun sequence.
ACCESSION   DAPWGO010000046 DAPWGO010000000
VERSION     DAPWGO010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12000)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12000)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12000
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.047"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(84..653)
                     /gene="efp"
                     /locus_tag="RJ336_001116"
     CDS             complement(84..653)
                     /gene="efp"
                     /locus_tag="RJ336_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDZ5213567.1"
                     /translation="MASYSMGDLKKGLKIEIDGIPFKIVEYQHVKPGKGPAFVRIKIK
                     SFIDGKVLEKTFHAGDKCEAPNLEDKTMQYLYDDGENCQFMDTQTYEQVAISDDDVGE
                     AKKWMLDGMMVDVLFHNGKAIGVEVPQVVELKIIETAPNFKGDTQGSNKKPATLETGA
                     VVQIPFHVLEGEVIRVDTVRGEYIERANK"
     gene            767..1087
                     /gene="rnpB"
                     /locus_tag="RJ336_001117"
     ncRNA           767..1087
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="RJ336_001117"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(1085..1360)
                     /locus_tag="RJ336_001118"
     CDS             complement(1085..1360)
                     /locus_tag="RJ336_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213568.1"
                     /translation="MKQWLSDFKLALIQEDVNKLENLLDELDMKAFIKNLTKESPSED
                     FLKENANDLFYQVQALLQEAVMLIEQKKKTKAVEIQKFQKALTYFKS"
     gene            complement(1341..1727)
                     /gene="fliS"
                     /locus_tag="RJ336_001119"
     CDS             complement(1341..1727)
                     /gene="fliS"
                     /locus_tag="RJ336_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HDZ5213569.1"
                     /translation="MQNNLAYNAYSQNQVGIESPQKLIEMLYEGILRFCARAKVAIRN
                     EDIEQRVYFVKRTTAIFIELINTLNYEKGGEVAHYLSGLYTREIQLLSLANLENNEDR
                     INEVINVTKGLLEAWREVHNNETVAQ"
     gene            complement(1739..3667)
                     /gene="fliD"
                     /locus_tag="RJ336_001120"
     CDS             complement(1739..3667)
                     /gene="fliD"
                     /locus_tag="RJ336_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HDZ5213570.1"
                     /translation="MAFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENT
                     TKQKDLTEIKTKLLSFQTAVSSLADATVFAKRKVVGSISDNPPASLTVNSGVALQSMN
                     INVTQLAQKDVYQSQGLANDGGFVNAKLNGTADLTFFSNGKEYTVTVDKNTTYRDLAD
                     KINEASGGEIVAKIVNTGEKGTPYRLTLTSKETGEDSAISFYAGKKDAQGQYKSDSEA
                     EKIFKSLGWELDTTSSIDPAKDKKGYGIKDASLHIQTAQNAEFTLDGIKMFRSSNTVT
                     DLGVGMTLTLNKTGEINFDVQQDFEGVTKAMQDLVDAYNDLVTNLNAATDYNSETGTK
                     GTLQGISEVNSIRSSILADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDAGT
                     LSFDSSKFEQKVKEDPDSTESFFSNITKYEDINHTGEVIKTGSLSKYLNSNGGNTNGL
                     EFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEELLQNLANHINSKGIEGLKVKVE
                     SYNQNNVTGFRLNFSGDGSSDFSIKGDANILKELGLSDVNITSKPIEGKGIFSKLKAT
                     LQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYESILNKLN
                     QQLNTVTNMINAANNSNN"
     gene            complement(3670..4035)
                     /gene="flaG"
                     /locus_tag="RJ336_001121"
     CDS             complement(3670..4035)
                     /gene="flaG"
                     /locus_tag="RJ336_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella length regulator FlaG"
                     /protein_id="HDZ5213571.1"
                     /translation="MEISKANGQMDTALANISQRTSETQASLNIQTDRSQGQEGDDGQ
                     QRGVSEKLADITKKLNEQMDSLDTNVRFGYSDKIGSMYISVTEKSTGREIRQIPSEEA
                     MRLAEYFRDVIGMIFDKES"
     gene            complement(4191..5993)
                     /locus_tag="RJ336_001122"
     CDS             complement(4191..5993)
                     /locus_tag="RJ336_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HDZ5213572.1"
                     /translation="MKEFIQILKENDLLRVIEEPVDVDLEIAHLAYIEAKKGEKGKAL
                     LFKNPIDKKLNKQYKFPVLMNTFCNEKALNLAFGRDYEEVAEEISKLTKLHIPTSFKA
                     KMDFFMNLLSFKNIPPKRLKKNKALYDYEILNSLEELPMLKTWEDDAGKFITMGQVYT
                     QNLDKTQNNLGMYRLQMSDKNELLMHWQIHKDGANFYHEYKNAGFKKMPVSIAIGGDP
                     LYIWCSQAPLPKGIFELLLYGFIKKTPVKLTPCENGIFVPYDSDVVIEGYVDLEEFKI
                     EGPFGDHTGFYTPAELFPVMKVEKIYAKKDAIYQATVVGKPPLEDKIMGLGTERIFLP
                     LLQTSVPDLIDYNMPENGVFHNLILAKIDAKYPAHAQQIMHAFWGVGQMSFVKHAIFV
                     DKNAPSLKDYDALIPYILNRFDAEKILISEGICDQLDHASPNSCFGGKAGLDACEEIQ
                     VEELEILEDEKLLELFKTKVELLNLKQFYKESKSPIVCILLDKKEKIEQSFDKLLEFK
                     KHFRILVFLDAENKLENSYMLVWRVVNNIDAKRDIFIKEERLGVDASAKGEAEGYLRA
                     WPKQTDCTKSVIEDLILRNILENNPDLFNKFEIF"
     gene            complement(5990..6913)
                     /gene="hemC"
                     /locus_tag="RJ336_001123"
     CDS             complement(5990..6913)
                     /gene="hemC"
                     /locus_tag="RJ336_001123"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDZ5213573.1"
                     /translation="MKLIIATRKSQLALWQSEHVAQILKNTHQIEVLLEGFKTKGDVL
                     LDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSND
                     AMLSQNYKDFLSLPKGAKIGTTSLRRKMQLLLLRPDLEIVSLRGNVNSRIEKLKNNKF
                     DAIILAMAGIKRLNLDKQVNFVYEFSKDELIPAASQGALGIESINDEKILKLLKCLND
                     ENALIETSIEREFIATLEGGCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIK
                     KNDFKGFGESLAKEFIAKGAKELLKKAESMI"
     gene            complement(6910..7299)
                     /locus_tag="RJ336_001124"
     CDS             complement(6910..7299)
                     /locus_tag="RJ336_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HDZ5213574.1"
                     /translation="MNYKLSLSPLFVLEIIASILFIVFFGFGNFLFFILLSMIFGAVL
                     LGIFWKNMLEFQMGGLKDMLTQFSFVIAGFLLIFPGIITSVFGIFVFFFGIALKLITK
                     SKYQYTKQEYQNSNEEIIDVEIIEDRK"
     gene            complement(7296..9005)
                     /locus_tag="RJ336_001125"
     CDS             complement(7296..9005)
                     /locus_tag="RJ336_001125"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDZ5213575.1"
                     /translation="MMRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFL
                     PLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKE
                     NEFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKD
                     GYSFHANEEDLGREFELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNG
                     EDDILICENCDYAANVEAAKRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA
                     FYTIKAVVKKAIYENESKLVVFFIRGSDDLQEIKAQNACSALELVDASEEELEKAGLV
                     AGFIGFVGLKDVDFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKE
                     GDCCAKCGAKLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSR
                     LLAVAIEANHDEKGCIWNKTLAPFVLEIIISNLKDEKALEFANKLYEDLTNLGLEVLL
                     DDRNERFGVKMNDFELMGFPYALVIGKGLENNEIEFIQREGLIKELIKTDELMEILKK
                     KVL"
     gene            complement(8989..10287)
                     /locus_tag="RJ336_001126"
     CDS             complement(8989..10287)
                     /locus_tag="RJ336_001126"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDZ5213576.1"
                     /translation="MYYCISFTHKNTDIALREKLSFFNEAKKSEFLKIISTHENIEEC
                     LVISTCNRVEIVAFVKMACAEFIVKSLALLCDVDKDILLEKADIFEDSGAIHHLFSVA
                     SSLDSLVVGETQIAGQLKDAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNP
                     ISVASVAVAKAKELADLTQKKAVVIGAGEMGELAAKHLIAAGAKVIILNRDLQKAKDL
                     CERLGVLSEYDSLENLKKYLNQYEFFFSATNAPNAIITNSLIEELPYKRYFFDIAVPR
                     DIDINENENISVFAVDDLEIVVQKNLALREQEARMAYGIIGRETSEFFRYLNDLALMP
                     IIKAIRLQAKEYADKQLEIALKKGYLKKSDKEEARKLIHQVFKAFLHTPTVNLKHLQG
                     KMQSDTVINAMRYVFDLQNNLEGLNQYKCEFDMENNDEIY"
     gene            complement(10287..11180)
                     /locus_tag="RJ336_001127"
     CDS             complement(10287..11180)
                     /locus_tag="RJ336_001127"
                     /EC_number="2.5.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexaprenyl-diphosphate synthase"
                     /protein_id="HDZ5213577.1"
                     /translation="MQKIDELIKQFLQELGYEPILNMLSNVKSGKKLRSKLLLAIADE
                     SEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF
                     YELSKMDARFASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASA
                     RCGAILAGLYEKDFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPY
                     IYLYENLQEQDRIYLQTLFKKDLNENEKEWLKTKFEEQKALEKAILEAKTYAKKASKA
                     IEKYDNNKLNDIIKAMIDREF"
     gene            complement(11194..11730)
                     /locus_tag="RJ336_001128"
     CDS             complement(11194..11730)
                     /locus_tag="RJ336_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exporting protein"
                     /protein_id="HDZ5213578.1"
                     /translation="MFKISPCLICIFFIFSNVLASEPTFDYTYKFILKKDERASVQIK
                     EIGYEDKVQNFDFYWTLFDNTNIIVHSKFRKYPRQFVMSLRRNLDWVTQTLIPDYTNP
                     HIDRARLILEFSGYNKGLATFTVYIEDKESRLMVEFLDPRKKALQNPPQNNQVVPMIN
                     FNEPQVKPLTSKENNNSN"
     gene            complement(11733..11996)
                     /locus_tag="RJ336_001129"
     CDS             complement(11733..11996)
                     /locus_tag="RJ336_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2018 family protein"
                     /protein_id="HDZ5213579.1"
                     /translation="MDFFDEMFNKTPKEKFIEIIQNGNLGALEKVFEEFFADHIAMVE
                     LLEKQGLTEMDVKNFILENGDFIEERQNDIYIELGAKILGHEG"
BASE COUNT         3925 a         2309 c         1398 g         4368 t
ORIGIN      
        1 agaatggaat gagaaattaa gtaacaaaat aaattttata taaatttaaa aaagccttgg
       61 aatagtccaa aagctttttt gtattacttg ttcgctcttt ctatatactc accacgcaca
      121 gtatcaacgc gtataacttc accttctagc acgtgaaaag gaatttgcac tactgcacct
      181 gtttctaatg tagctggttt tttatttgat ccttgagtat cacccttaaa atttggagct
      241 gtttcgatga ttttgagttc aacaacttgt ggaacttcta cgccgatagc tttaccattg
      301 tggaaaagca catctaccat cataccatca agcatccatt tttttgcctc acctacatca
      361 tcatcactga tagctacttg ttcatatgtt tgtgtatcca taaattggca attttcacca
      421 tcatcataaa gatactgcat agttttatct tctaaatttg gagcttcaca tttatcacct
      481 gcatggaaag ttttttcaag tactttacca tcaataaaag atttgatttt aatacgcaca
      541 aaagcaggac ctttgcctgg ttttacatgc tgatactcaa ctattttaaa aggaattcca
      601 tcgatttcta ttttaagtcc cttttttaaa tcacccattg aataagatgc cataaatttc
      661 ctttgttaaa aaataaaaaa taattttatc aaattttgat tgatatcaca ataaaattat
      721 tttatttgat gaaaaaataa gtaaaattac gttaaaatcc aaatttaaag catagtaaat
      781 gctcgcttct ttttagaaga ggaaagtccg ggctgctaaa gacaaacatt ccatctaaca
      841 gatggctagg gtaacctaag ggatagtgca acagaaagaa aactaccacg caagtggaaa
      901 aggtgaaacg gcggggtaaa agcccaccag cgattttggt aacaatttcg gctatgtaaa
      961 cccaatgtgc agcaagaagg gatggttagc gtctttgttt taacccttcg cttgattttg
     1021 tttgcaaaaa caaaactaga taaatgagca ttcaagacag aactcggctt atcgctatgc
     1081 ttttttaaga tttaaaatat gtcaacgctt tttgaaattt ttgaatttca acggcttttg
     1141 tttttttctt ttgttcaatc agcataacag cttcttgcaa aagagcttga acttgataaa
     1201 atagatcatt tgcattttct tttaaaaaat cttctgaagg cgattctttg gttaaatttt
     1261 taataaaagc tttcatatca agttcatcaa gtaaattttc aagtttattg acatcttctt
     1321 ggattaatgc aagtttaaaa tcactgagcc actgtttcat tgttatgcac ttctctccaa
     1381 gcttctagca aacctttggt tacatttata acttcattga ttctatcttc gttattttct
     1441 aaatttgcca aagataaaag ttgaatttct cttgtataaa gcccgcttaa ataatgtgcc
     1501 acttctccgc ctttttcata gtttaaagta ttaataagct ctataaaaat agccgtggtt
     1561 ctttttacaa aatacactct ttgttctata tcttcatttc ttatggctac tttagctctt
     1621 gcacaaaaac gcaaaattcc ctcataaagc atttcaataa gtttttgcgg ggactctatc
     1681 cccacttgat tttgagaata agcattatag gctaaattat tttgcatctt ttttatcctt
     1741 aattattaga attgtttgcc gcattaatca tattagtcac agtatttagc tgttgattga
     1801 gtttatttaa aatactctca tattgcaacc attgattcgc cattgtatca tatcttgtat
     1861 caatcatagc ctgagtcgag tctttagagg tatttaatga tttaatatca tttgtcaaac
     1921 tctcatcata ttttgtaatt gaaccatctt ttccagtcat ctcttgcaac gtggctttta
     1981 attttgaaaa aataccttta ccttctatag gcttagaggt tatatttacg tcagacaaac
     2041 ctaattcctt gagaatgtta gcatctcctt tgattgaaaa atccgagcta ccatctccac
     2101 taaaattcaa cctaaaccct gtaacattgt tttgattata ggattcaacc ttaactttta
     2161 agccttcaat acctttactg tttatatgat tagctaaatt ttgaagcaat tcttcctctg
     2221 ttttccctgt taatttaaaa ttagtaccat cagaattttt agataaatca tatgtttgat
     2281 tattaaaaac tatagtaaaa tctcctggtt taaattctaa accattagta ttacctccat
     2341 tggaattaag atatttactt aaacttcctg tcttaattac ctctcctgtg tgattaatgt
     2401 cttcgtattt agtaatattt gaaaaaaaac tttcagtaga gtctggatct tctttaactt
     2461 tttgttcaaa tttagaagaa tcaaaactca aagtgcctgc atcatttaaa cttaagccaa
     2521 aatcctgcat agaaagcata accttagtgt ttactttatt accatttgca tcttcagtag
     2581 ttccatcaac aacttgagaa tcaaacaaat cagcaagaat gcttgagcgt attgaattta
     2641 cttcactgat gccttgtaaa gttccttttg ttccagtttc actattatag tcagttgcag
     2701 cattaagatt ggttactaaa tcattataag catccaccaa atcttgcatg gcttttgtca
     2761 caccttcaaa atcttgctgt acatcaaaat taatttcacc tgttttattt aaagttaaag
     2821 tcattcctac accaagatcg gtaacagtat tacttgatct aaacatctta ataccatcaa
     2881 gtgtgaattc tgcattttgc gcagtttgga tatgcaaaga agcatcctta ataccataac
     2941 cttttttatc cttagctgga tcaatagaac tcgttgtatc taattcccat ccaagacttt
     3001 tgaatatttt ttctgcctct gaatcacttt tatactgacc ctgcgcatct ttttttcctg
     3061 catagaaact tatcgcactg tcttcgcctg tttctttact ggttaaagtt aagcggtaag
     3121 gagtaccttt ctctcctgtg tttacaatct tagcgacaat ctctcctcca ctagcttcat
     3181 taattttatc agctaaatct ctataggttg tgtttttatc taccgtaaca gtatattctt
     3241 tgccatttga aaaaaaagta agatcggcag ttccatttaa ttttgcatta acaaaaccac
     3301 catcatttgc caatccttga ctttgatata catctttttg tgcaagttga gtaacattga
     3361 tattcatgct ttgtaaagca acacccgaat taactgtaag acttgctgga ggattatcgc
     3421 taatacttcc tacaactttt cttttcgcaa aaaccgtagc atcggctaat gatgaaacag
     3481 ccgtctgaaa acttagtaat ttagttttga tttctgttaa atctttttgt ttggttgtat
     3541 tttcttcaat ttttttagta taaggatcaa tacgagcttt ttgctctgct tcttttaatt
     3601 tatctatagt atcttgagtt aaaaccccag aaccaaatcc taaactagat agactaccaa
     3661 atgccatttt taactctcct tatcaaatat cattcctatc acatccctaa aatactcagc
     3721 taatctcata gcttcttcac taggaatttg acggatttcc cttccagtgc ttttttcagt
     3781 cacgctaata tacatagaac cgattttatc actataacca aaacgaacat tggtatctag
     3841 agaatccatt tgctcattta acttttttgt aatatcagcc aacttttcac tcacacctcg
     3901 ttgctgtcca tcatcgcctt cttggccttg acttctatcg gtttgaatgt ttaaactagc
     3961 ctgtgtctca cttgttcttt ggctaatgtt tgccaaagct gtatccattt gcccatttgc
     4021 cttcgatatt tccattttaa aatccttttt aaaatttcct attgctagtt aaaagcttat
     4081 atcgacaaat ttataaattt atgaacacct ataaagaaaa ttttattttt caataataaa
     4141 aaataataag caaaaactgt gccaaaattt taaaataaat ctcaattatc ttaaaaaatt
     4201 tcaaatttat taaaaagatc tggattattt tctaaaatat tacgcaagat caaatcttct
     4261 atcacgcttt tagtgcaatc tgtttgctta ggccaagctc ttaaataacc ctcagcttca
     4321 cctttagcac ttgcatctac tccaagtctt tcttctttga taaaaatatc tcttttagca
     4381 tctatattat ttaccacacg ccaaacaagc atataagaat tttcaagctt attttcagca
     4441 tctaaaaata ctaaaatcct aaaatgtttt ttaaattcta aaagtttgtc aaaactttgt
     4501 tcgatttttt cttttttatc aagcaaaata caaactatag gacttttact ttctttataa
     4561 aattgcttta aatttaaaag ttctacctta gttttaaaaa gttctagtaa tttttcatct
     4621 tctaaaattt caagctcttc aacttgtatt tcttcacaag catcaagtcc tgctttaccc
     4681 ccaaaacaag aattaggcga agcatgatct aattgatcac aaattccttc tgaaattaaa
     4741 attttttccg catcaaaacg atttaaaata taaggaatta aagcatcata atctttcaaa
     4801 gaaggtgcat ttttatccac aaaaattgca tgtttaacaa aactcatttg ccctactccc
     4861 caaaatgcat gcataatttg ttgcgcatga gcaggatatt ttgcatcgat ttttgctaag
     4921 ataagattat gaaagactcc attttcaggc atattataat caattaaatc aggcaccgaa
     4981 gtttgaagca agggtaaaaa aattctttca gtaccaagcc ccatgatctt atcttctaaa
     5041 ggaggtttcc ctacaaccgt tgcttgatag atcgcatctt ttttagcata aattttttct
     5101 actttcatca caggaaaaag ttcagcagga gtataaaaac ccgtatgatc tccaaaagga
     5161 ccttcgattt taaactcttc taaatccaca taaccttcaa taactacatc actatcataa
     5221 ggcacaaaaa taccattttc acaaggagta agttttacag gagttttttt aataaaacca
     5281 taaagcaaaa gttcaaaaat tcccttaggt aaaggtgctt gagaacacca aatataaagc
     5341 ggatctccac ctatggctat acttacaggc atttttttaa aaccagcatt tttgtattcg
     5401 tgataaaaat ttgctccatc tttatgaatt tgccaatgca ttaaaagttc atttttatca
     5461 ctcatttgca aacgatacat tccaagatta ttttgagttt tatctaaatt ttgtgtataa
     5521 acttgcccca tggtaataaa tttacccgca tcatcttccc aagtttttag catgggaagt
     5581 tcttcaaggg agtttaaaat ttcataatca tacaaggctt tatttttttt cagtctttta
     5641 ggaggaatat ttttaaaact taacaaattc ataaaaaaat ccatttttgc tttaaaactc
     5701 gtaggaatat gaagcttggt gagttttgaa atttcttcag ccacctcttc ataatcacgc
     5761 ccaaaagcta aatttaaagc cttttcattg caaaaagtat tcatcaaaac aggaaattta
     5821 tattgtttat ttaatttttt atctatagga tttttaaata ataaagcctt acctttttct
     5881 ccttttttag cttctatata agctaaatga gcgatttcaa gatctacatc tacaggctct
     5941 tcaattaccc ttaaaagatc attttctttt aaaatttgaa taaattcttt catatcatac
     6001 tctcagcttt ttttaaaagt tctttagcac ctttagcaat aaactcctta gccaaactct
     6061 ccccaaaacc tttaaaatca ttctttttaa tcattctttt atcttttaaa atttcacttc
     6121 catcgggtag tccaagtacc gcacgcacac aaatttcatc tcctaaaagc tctgcgttaa
     6181 tacctatagg aacttgacaa cccccttcta aagtagcaat aaattctctt tcaatgcttg
     6241 tttcaatcaa agcattttca tcatttaaac attttaaaag ttttaaaatt ttttcatcat
     6301 ttatactttc tatacctaaa gctccttgag aagctgcagg aataagctca tctttactaa
     6361 attcataaac aaaattcact tgcttatcta agtttaagcg tttaattccc gccatagcta
     6421 aaataatcgc atcaaattta ttatttttta atttctctat acgagaatta acattaccac
     6481 gcaaagaaac aatttctaaa tcaggtctta acaataaaag ctgcatcttg cgtctaagac
     6541 tagtagtgcc tatttttgca ccttttggca aagaaagaaa atctttataa ttttgactta
     6601 gcatagcatc attgctttgc tctcttttac ttaccgccgc caaaactaaa ccttgaggaa
     6661 aaaaactagg cacatctttt aaactatgta ctgctaagtg tgcttctttt ctcaacatac
     6721 tttcttcaag ttcttttgta aaaagtcctt taccaccaat ttttgccaaa ggagaatcca
     6781 gcaaaacatc gccttttgtt ttaaaacctt ctaaaagcac ttcaatttga tgtgtatttt
     6841 ttaaaatttg ggctacatgc tcactttgcc aaagagctaa ttgacttttt cttgttgcga
     6901 taataagctt cattttctat cctctataat ttcaacatca ataatttctt cattagaatt
     6961 ttgatactct tgcttggtgt attgatattt tgatttagtt attaatttca aagcaatacc
     7021 aaagaaaaat acaaaaattc caaaaacact tgtaataatc cctggaaaaa taagtaaaaa
     7081 ccctgcaata acaaaagaaa attgtgttaa catatccttt aagccgccca tttgaaattc
     7141 aagcatattt ttccaaaaaa ttcccaataa aaccgcacca aaaatcatac tcaaaagtat
     7201 gaaaaataaa aaattaccaa aaccaaaaaa cactataaaa agtatacttg caataatttc
     7261 aagtacaaat aaagggctta aacttaattt ataattcata acactttctt tttaagaatt
     7321 tccataagtt catcagtttt tataagttct tttatcaaac cttctctttg gataaactct
     7381 atttcattat tttctaatcc tttaccaata actaatgcat aaggaaaacc cataagttca
     7441 aaatcattca ttttaacccc aaaacgctca tttctatcat caagcaatac ttctaatcca
     7501 agattagtta aatcctcata aagcttatta gcaaattcta aagccttttc atctttgaga
     7561 tttgaaataa taatttcaag cacaaaagga gctaaagttt tattccaaat acatcctttt
     7621 tcatcatgat ttgcttcaat agctacagcc aataagcgtg aaacacctat accgtaacat
     7681 cccatgtaaa aaggctggct tttgccattt tcatctaaaa aatttgcatt catcgcttta
     7741 gaatattttt gtccgagttt aaaaatatgc cctacttcta tacctttgct ttgttttaat
     7801 tttgctccac atttagcaca gcaatcccct tccttaactt caatcaaatc tttaaaacga
     7861 tctttgttta aatttacaac atcaatgccg attaaatgat aatctttttc attcgcaccc
     7921 ataatcatct gcttttcgtt ttcaagctca aaatctatat aaaaatctac atcttttaat
     7981 cccacaaaac ctataaaacc agctaccaaa ccagcttttt ctaattcttc ttcgctcgca
     8041 tcgactagtt caagggcact acaagcattt tgagccttga tttcttgtaa atcatcactt
     8101 cctcttataa aaaacacaac taatttgctt tcattttcgt aaatagcttt ttttaccact
     8161 gctttaatcg tataaaaagc attgatttta aaaaattgtg ctaaagaatc tatagtttta
     8221 atatttggag tgtgaaattt actcgcataa tttgcttcag gacgctcatc ttgacaagtt
     8281 tttttagctc tttttgcagc ttcaacatta gccgcataat cacaattttc acaaattaaa
     8341 atatcatctt ctccattttt tgctaaaacc ataaattcct tagaaccact tccaccaata
     8401 gccccactat cagcttcaac tgctctaaaa tcaagcccca ttctttgtaa aatttgagaa
     8461 taagttttat acataagctc aaactcacgc cctaaatctt cttcattagc atgaaaactg
     8521 tatccatctt tcattagaaa ttcacgacat cttaaaagcc caaatctagg ccttgcttca
     8581 tcacgaaatt taagtccaat ttgatataaa tgcaaaggaa gttgtttata gcttgtgatt
     8641 ttgtttttta ccaaagaaag catagcttct tcatgtgttg gacctaaaac aaattcattt
     8701 tcttttctgt ctttaaaacg caaaagttct tttccaaaaa cattataacg cccactttct
     8761 tgccacaaac ttgcaggagt gataaaacta agatttactt cttgtgctcc agccttatcc
     8821 atttcttctt taactatatt tttaatctta tctaaaactc tttttcccaa aggcaagaaa
     8881 ttataaagtc cactgccaat ttgttctaca aaacccgcac gcgttaaaaa aatatgacta
     8941 ggcaaactcg catcttttgg tgcttctttt aaacttggtg cataaaattt agtaaatctc
     9001 atcattattc tccatatcaa attcacattt atattgattt aaaccttcaa gattattttg
     9061 taaatcaaaa acataacgca tagcattaat cactgtatcg ctttgcattt taccttgtaa
     9121 atgtttcaaa ttcacagtag gtgtgtgtaa aaaagcctta aaaacttgat gaatcaactt
     9181 tctagcctct tctttatcag attttttcaa atatcctttt tttaacgcaa tttcaagttg
     9241 tttatctgca tattctttag cttgcaagcg tatggctttg ataataggca tcaaagccaa
     9301 atcgtttaaa tacctaaaaa attcacttgt ttcacgacct attatcccat aagccatacg
     9361 agcttcttgt tctcttagtg ctaaattttt ttgaaccaca atctcaagat catctacggc
     9421 aaaaacagat atattttcat tttcattgat atcaatatcc cttggaactg caatatcaaa
     9481 aaaatacctt ttataaggaa gttcttctat tagagaattt gtaataatag catttggtgc
     9541 attagtagct gagaaaaaaa actcgtattg atttaaatat ttttttaaat tttctaaact
     9601 atcatattcg cttaaaacac caagtctctc acacaaatct ttagcttttt gtaaatcacg
     9661 atttaaaata atcactttag cacccgcagc aattaaatgt tttgccgcaa gttctcccat
     9721 ctctccagct ccaataacaa cagctttttt ttgcgttaaa tctgcaagtt cttttgcttt
     9781 tgccacggca acactagcta cagagatagg atttttagaa atttgagttt cattgcgtac
     9841 cttagcagca catttaaaag cactatgtac tgctcttgaa agatgtactc cgcaaaaatt
     9901 attttttact gcaaaagcaa aggcatcttt taattgccct gctatctgag tttctccaac
     9961 caccaaacta tccaaagaac ttgctacgga aaaaagatga tggattgctc cactatcttc
    10021 aaaaatatca gctttttcaa gtaaaatatc tttatccaca tcacaaagca aagccaaaga
    10081 tttaacaata aactccgcac aagccatttt tacaaaagca acaatttcaa cacgattgca
    10141 agtacttata accaaacatt cttcaatatt ttcatgagtg ctaatgattt ttaaaaactc
    10201 acttttttta gcttcattga aaaagcttaa cttttccctt aaggcaatat ctgtattttt
    10261 atgagtaaaa gatatacaat aatacattaa aattccctat ctatcatagc tttaataata
    10321 tcattaagct tgttattatc atatttttca atcgctttac tagccttttt tgcataagtt
    10381 ttagcttcta aaatagcttt ttctaaagct ttttgttctt caaatttagt ttttagccac
    10441 tctttttcat tttcatttaa atctttttta aataaagtct gcaaatatat cctatcttgt
    10501 tcttgcaaat tttcataaag ataaatataa ggtaaggtag tcttaccctc tttaaaatca
    10561 ttcatagcag gttttccaag aattttttca tcactcttaa tatctaaaat atcatcaatc
    10621 atctgaaaag cgagtcctaa attttttcca tattctgcaa aatctttttc atataatcca
    10681 gccaaaatag ctccgcatct cgcacttgct tcaatcaaaa cagctgtttt attatagatc
    10741 attttcaaat aagcttcttt attgatatta aatttctctc ccaaatcaac atccataagt
    10801 tcgcctatag caagctttac aacagcatct gaaataatac ttgcaaatct agcatccatt
    10861 ttgcttaatt cataaaaggc ttttgaatac aaaatatcgc ccaacataag agcatttttt
    10921 gtaccaaatt cagcattaac agatcttgct ccacgcctta attcactctc atcgataata
    10981 tcatcatgta acaaactagc aagatgtatc aattctatag ccgcacaaat tttaaaagca
    11041 atctcactct catctgcgat agctaataat aatttagagc gtaatttctt tcctgatttt
    11101 acatttgaaa gcatatttaa aataggttca tagccaagct cttgtaaaaa ctgttttatt
    11161 aattcatcta ttttttgcac tatcttttcc ttgttaattg ctattattat tttctttgct
    11221 tgttaatggt tttacctgag gttcgttaaa attaatcata ggaacaacct gattattttg
    11281 cggtggattt tgtaaagctt tttttctcgg atctaaaaat tctaccatta agcgagattc
    11341 cttatcttct atataaaccg taaaagttgc caaaccttta ttataaccac taaattctaa
    11401 aataagtctt gctctatcaa tatgtggatt agtataatca ggtattaaag tttgagttac
    11461 ccaatctaaa tttcttctta aactcatcac aaattgacgc ggatatttgc gaaatttcga
    11521 atgtacgatg atattagtat tatcaaacaa agtccaataa aaatcaaaat tttgcacctt
    11581 atcttcatag cctatttctt taatctgcac actagctctc tcatcttttt taagtataaa
    11641 tttataagta taatcaaaag ttggttcaga tgctaaaaca ttactaaaaa taaaaaaaat
    11701 acaaattaaa caagggctta ttttaaacaa ttttagcctt cgtgtcctaa aatttttgcg
    11761 cccaattcta tataaatatc attttgcctt tcttctataa aatcaccatt ttctaatatg
    11821 aaatttttta catccatttc tgttagacct tgtttttcca aaagttccac catggcaata
    11881 tgatcagcaa aaaattcctc aaaaactttt tctaaggctc ctaaatttcc attttgtata
    11941 atttctataa atttttcttt tggagtttta ttaaacattt catcaaaaaa atccattaat
//
LOCUS       DAPWGO010000047        11827 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.048, whole genome shotgun sequence.
ACCESSION   DAPWGO010000047 DAPWGO010000000
VERSION     DAPWGO010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11827
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.048"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..1951
                     /gene="ccsA"
                     /locus_tag="RJ336_001130"
     CDS             <1..1951
                     /gene="ccsA"
                     /locus_tag="RJ336_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDZ5213580.1"
                     /translation="YRIFMNNVLDYDGYRFYQSSYDQDEKGTVLSVNKDPGKIPTYIG
                     YFLLCLGMFMNFLNPHSRFRTLARLINKDTLKHASVIIFILLLSFGSEKTFAQDLNLT
                     LPVVNTNHAKALATLIVQKSADGRMVPFDTLSREILEKIHQSDSYKGQNSNAVMLSML
                     VDVDKWQMEPFILMPQNQAVRDAIANILEIPSTKYISYKDFFDENNRYKLQKYVENAN
                     RKNPNARGVFDKEIIKLDERANVVNLVFSGELFKFIPVQNNPNNVWLAPFSAVTTLKG
                     DEGHIVLALIQNYFSAVENAFKDGNWTRADEGLKFIKEYQEKIGYKVMPSKTKVEMEI
                     FSNKAEIFVKLAPVYLIAGFLLLILVFSKMVVPNLKISFIFKVVYVLNVLAFVIHTVG
                     LGLRAYLSGHAPWSNGYESMVYIAWALSLSGIFFSRKSPIALSLTSILSGVVLMVAHL
                     SEMNPQITNLVPVLNSYWLSIHVSVITASYGFLGLCALLGIFTLFLMCFLKKDGKYNL
                     NILRNITEATRINEMAMIFGLCLLTVGNFLGAIWANESWGRYWSWDSKETWALVSILV
                     YAAILHLRMIPKYCNQFVFALWSMFAYWVIIMTYFGVNYFLTGLHSYAAGEAAQIPNY
                     VYWGFALMVVLALFARRKRNFVGKL"
     gene            1967..2416
                     /locus_tag="RJ336_001131"
     CDS             1967..2416
                     /locus_tag="RJ336_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213581.1"
                     /translation="MVIFCAALALLLFLGMIAYLITSDGKKTIKKQKTSQKQHVAEKT
                     KKFDTDLDKMIIAASDVKLTDIELKELAKLYVQTHKLGSKTSKELDEATKKKLEFVSA
                     LAANINASAQTVSYLNKELKKISGSYKKEIDAYEHMGLAKRKIKEDK"
     gene            complement(2419..2495)
                     /locus_tag="RJ336_001132"
     tRNA            complement(2419..2495)
                     /locus_tag="RJ336_001132"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2459..2461),aa:Arg,seq:gcg)
     gene            complement(2548..3315)
                     /locus_tag="RJ336_001133"
     CDS             complement(2548..3315)
                     /locus_tag="RJ336_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HDZ5213582.1"
                     /translation="MLELHENLKKILQAKNLETFYSEIYGQKIFVYVGLNLETWLFND
                     EKIYKLQDEEFKLSSIEEFSNFIKSILEDFKVQNTHFQNLLEHKEGIILKGGFVKNFY
                     KKSFVLRQKINKNLKQINLLSEAFNLLLSEQAQYKKHLKILNLSISILSKNTKEHLAR
                     VDTLYALTSAIKNEKMNKSIYLLSILSSIFLPLNLIVGFFGMNTNNLFFKDSPYGTLY
                     IFSLICCILIVGFIFYHSKKTKEFDLDEGKKAKKQTK"
     gene            complement(3317..4438)
                     /gene="tgt"
                     /locus_tag="RJ336_001134"
     CDS             complement(3317..4438)
                     /gene="tgt"
                     /locus_tag="RJ336_001134"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDZ5213583.1"
                     /translation="MEFKLKHKDGMARVCEIITAHSTFLTPVFMPVGTVGAVKSLDAN
                     DMKNELDAKIILANTYHMYLRPTSKVVKDFGGLHGFTKFDRSFLTDSGGFQAFSLSKN
                     SKHFNEGIEFKSHIDGSRHLFTPKSVLDTQYDFNSDIMMILDDLVALPATKERVKISV
                     DRTILWAKEAITYHKSMQNKGIGIGQNIFGIIQGGTDYEERKRCALSLNEMPFDGLAI
                     GGLSVGEENALMYETVQNLNPYLDENRPRYLMGVGTPEDLVENVERGVDMFDCVMPTR
                     NARNGTFFTSFGKFNIKKAEFINNHEAIDPVCSCYTCRNFSRGYLNHLFKAKELTFFR
                     LASLHNLHYYLELARKMREAILNNSFTQFKRNFYHLRGK"
     gene            4468..5868
                     /locus_tag="RJ336_001135"
     CDS             4468..5868
                     /locus_tag="RJ336_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG3400 family protein"
                     /protein_id="HDZ5213584.1"
                     /translation="MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNI
                     SSEYIDLHYFDPTSTARLENIMSKDFKQAFIYMQDEFETKKSYEALRSLNPNLEIEIM
                     DFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
                     YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKA
                     GQFPMPFGSNVFALIDMKNMNQNMQERVLDTTLKLTQKSNAKRFFIHVINPKLGVMYE
                     KLKKLSEDKEGVFFDYFNTDFKQISTWLQNNDIGLVVTDIKNFEKEKQAFFDLKIPIM
                     KVGEASFDELKEAIILSADESELENNANVITDLSKQLDFGVILYYYNPNSQNTTDMEE
                     YFRSLSKLYDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFGRNLSTNLNR
                     HYYKMRQNYQLFIPVE"
     gene            5914..6969
                     /locus_tag="RJ336_001136"
     CDS             5914..6969
                     /locus_tag="RJ336_001136"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDZ5213585.1"
                     /translation="MQVEVKLKENAYKVYIDELEELEFDSKVFILSNPKISGLHLKTL
                     LSKIKAKEIFIATVKDGEEYKNLSTIEEILNQMFNSKLDRKSVLISFGGGVISDMGGF
                     AASIYQRGIDFINIPTTLLACVDAAVGGKTGVNNNFGKNLIGTFYQPKAVYCESSFLK
                     TLSSRELAAGMAEFIKMAAMFDDGILDFIEKIDEKSFLNATCENEIFTQIIARSIELK
                     SRVVEQDEKESGLRMLLNYGHTFAHVIENFTDYKLYLHGEAVAIGMVMANQLALNLGL
                     LDKMQSQKIKAILLKFGLPISYKINNVDEFYEAFFMDKKSSNKKINFVLASPLGKGLI
                     KGDISKEDIIATLREFR"
     gene            6966..8537
                     /locus_tag="RJ336_001137"
     CDS             6966..8537
                     /locus_tag="RJ336_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDZ5213586.1"
                     /translation="MKKIIILTFFVVFAFGDVNRTIINNINEKINTLNTVISASIWNI
                     RYENFIKYQDINDELIILNLNLKKTSDIHQQEELKRKIANLEEQLSLLKEYKDLNFAQ
                     SLSAPDNIETLSKLTNPLAIIGAFSHIKKLKGEKEEYIFKFNDFKNLVDKIREKNSEL
                     KELVELKPSVENIEALKASDKKLEEFEQALNFASVSYSVYEKKIDEELSRVSAEIKVQ
                     SLRAVNILVAIVIVIAIAFMLKFIAKKYIKDSERYYTATKIINFININIIFLILLFAY
                     IENITYLVTILGFASAGLAIAMKDMFMSMLGWCVIIFGGSFRVGDRVKVFQNDTTYIG
                     DIIDISFLRITLYEELTLETYNKNRRSGRIIFIPNNYVFTNLLANYTHHGMKTVLDGI
                     DISVTFDSNLDKAQEIVENIVTRHAKGYTELARKNIARLQHEYSIKNPKVEPRFFMFF
                     EHWGMRISAWYMTNAYAALVLRSTISKEIIKEFNKHKDIKIAYPSQNLYLGNLNQNHF
                     EQHHENTHFYARNKD"
     gene            8534..9784
                     /gene="mtaB"
                     /locus_tag="RJ336_001138"
     CDS             8534..9784
                     /gene="mtaB"
                     /locus_tag="RJ336_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HDZ5213587.1"
                     /translation="MKEKVFFKTFGCRTNIYDTELLKSYVKDYEIINDENKAQIIVVN
                     SCTVTNGADSGIKSYVNTMQKKGIKVILTGCGAVSKGKELLDKKQVFGVLGASNKDKI
                     NEFLGAKTSFYELGNLNFIDKDIVCEYENHTKAFVKIQEGCDFACSYCIIPSVRGKSR
                     SVDEKALLKQVEILGANGYSEIVLTGTNIGSYGLKNGTSLGKLLQKMGQISGIKRIRL
                     GSLEPAQIDESFLEILDETWLERHLHIALQHTSEKMLRIMRRRSHTDNDLKLFNTIAS
                     KGYALGTDFIVAHPGESEEVWQEALKKFKEFPLTHIHAFIFSPRNNTHSATMKDVING
                     TLAKERLNTLKSIVEKNNYEFRKKNQVSLEVLVENQKDGFFEGYDQFFNKIKIKSDKD
                     IAKEWIVISQYEVQEKSNFANLKG"
     gene            9788..11404
                     /locus_tag="RJ336_001139"
     CDS             9788..11404
                     /locus_tag="RJ336_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HDZ5213588.1"
                     /translation="MKNKKIILASFMVLCMLLGILYFKNEPKYIDENLYQSLLSQNLI
                     QKAVIDKDEIWLKAEGENYVIIKDGIDIKTLLAKVPVEVKKDNTLWVFFILPVFIIAL
                     FISLGYFARKKELAKYPISNKNQNHTQAQNSNINLESSHIKPVISNITFNDVAGVDEV
                     KMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAEVPFFYQSG
                     SSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNVERDSTLNQLL
                     TQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMKD
                     KNNNVNLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVLNKVLLGKK
                     KILSFNDEEKKIQATYQAAKALSAYYFDIGFEKITLIEDRFKEYEHNIRSKSELINRI
                     KVYLAGSRAMRLIYNESYTNSQDDFLKIKELLDYMLSFDMLEEPNLNEQKKEMDEFLN
                     SMKDKILKLSELLLEKEKIEHDDVKNIMQV"
     gene            complement(11412..11822)
                     /locus_tag="RJ336_001140"
     CDS             complement(11412..11822)
                     /locus_tag="RJ336_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HDZ5213589.1"
                     /translation="MKFLSIITILSLSLNADIIISADNLPSVSKEFLQHNFKAPIGIV
                     QKDKNSYEVYLSDGTELEFDIDGAWKEIENKAFPFDLDFLPQNLANIIKNEFPNIKAR
                     EIERKINHYKIKLDNDVKILIDFNGTILHKEIDD"
BASE COUNT         4223 a         1430 c         2016 g         4158 t
ORIGIN      
        1 ttatagaatt tttatgaata atgttttaga ttatgatggc tatagatttt atcaaagttc
       61 ttatgatcaa gatgaaaaag ggactgtttt atctgtaaat aaagatccag gtaaaatacc
      121 aacttatata ggttattttt tgctttgtct tggaatgttt atgaattttt taaatccaca
      181 ttctagattt agaactttgg caagattaat taataaagac actttaaaac atgcaagtgt
      241 gattattttt attttattgc tatcttttgg ttctgaaaag acttttgctc aagatttaaa
      301 tttgacctta cctgtggtaa atactaatca tgctaaagct cttgctactt taatagttca
      361 aaaatcagca gatggaagaa tggtgccttt tgatacgcta tcaagagaaa ttttagaaaa
      421 aattcatcaa agtgatagct ataagggtca aaattctaac gctgttatgc tttccatgct
      481 cgttgatgta gataaatggc aaatggaacc ttttatttta atgccacaaa atcaagcagt
      541 tcgtgatgct attgcaaata ttttagaaat tcctagcact aaatatattt cttataaaga
      601 tttctttgat gagaataacc gatataaact tcaaaaatat gttgaaaatg caaatcgtaa
      661 aaacccaaat gcaagaggag tttttgataa ggaaattata aaactagatg aaagagctaa
      721 tgttgtaaat ttagttttta gtggtgaatt atttaaattt attcctgttc aaaataatcc
      781 aaataatgtt tggcttgcac ctttttctgc tgtaactact cttaaggggg atgaagggca
      841 tattgttttg gctttaatac agaattattt tagtgccgtg gaaaatgctt ttaaagatgg
      901 taattggact agagctgatg aaggcttgaa atttatcaaa gaatatcaag aaaaaatagg
      961 atataaagtc atgcctagta aaaccaaggt tgaaatggaa attttttcta ataaggctga
     1021 aattttcgtt aaactcgctc ctgtatattt aattgcgggt tttttacttt tgattcttgt
     1081 tttttctaaa atggtcgtac cgaatttaaa aatctctttt atatttaaag tggtatatgt
     1141 tttaaatgtt ttagcttttg taattcatac agtaggtctt ggacttcgtg cttatttatc
     1201 aggtcatgct ccatggagta atggctatga aagtatggtg tatatagctt gggcattgtc
     1261 tttgtcgggt atatttttct ctagaaaaag tcctatagcc ttgtcattaa cttctatttt
     1321 atccggtgtt gtattaatgg ttgcacattt aagcgaaatg aatccgcaaa ttacaaatct
     1381 tgttcctgtg ctcaattctt attggcttag tattcatgta tctgttatta ctgctagtta
     1441 tggattttta ggactttgtg ccttacttgg tatctttaca ctgttcttaa tgtgttttct
     1501 taagaaagat ggaaaatata atcttaatat tttgagaaat attacagagg ctacaagaat
     1561 taatgaaatg gcaatgattt ttggactttg tttgcttact gtaggaaatt ttttaggtgc
     1621 aatttgggca aatgaaagtt gggggagata ttggagttgg gattctaagg aaacttgggc
     1681 tttagttagc attttggttt atgcagcaat tttgcatctt agaatgattc caaaatattg
     1741 taatcaattt gtgtttgctt tatggagtat gtttgcttat tgggttatta ttatgactta
     1801 ttttggagta aattactttt taacaggact tcattcttac gctgcaggcg aagcggctca
     1861 aattcctaat tatgtttatt ggggatttgc attgatggtg gttttagctc tttttgcaag
     1921 aaggaagcga aattttgtag gcaaactgta aatgagccat atttttttgg ttattttttg
     1981 tgctgcttta gcgcttttat tgtttttagg catgattgct tatcttatta caagtgatgg
     2041 caaaaaaaca attaaaaagc aaaaaactag ccaaaagcag catgtagctg aaaagactaa
     2101 aaaatttgat acagacttag ataaaatgat aattgctgct tccgatgtta aactaacaga
     2161 tattgaatta aaagaacttg ctaaacttta tgtgcagaca cataaacttg gttcaaaaac
     2221 ttctaaagaa ttagatgaag caacaaaaaa gaaactagaa tttgtttctg ctttggctgc
     2281 aaatattaat gcaagtgcac aaacagtaag ttacttaaat aaagaactta agaaaatttc
     2341 tggatcttac aaaaaagaaa ttgatgctta tgagcatatg ggattagcta aaagaaaaat
     2401 taaagaagat aaataatatg gtgcgctcaa gaggattcga acctctggcc ttttgaaccg
     2461 caatcaaatg ctctatccag ctgagctatg agcgcaaaaa taagttaaaa ttatatataa
     2521 atattcttaa aataagcaaa attttgctta ttttgtttgt tttttagctt ttttaccttc
     2581 atctaaatca aattctttag tcttttttga atgataaaat ataaaaccta caatcaaaat
     2641 acagcaaatc aaagaaaaaa tataaagtgt accataaggg ctatctttga aaaaaagatt
     2701 attagtattc attccaaaaa atcctacgat caaatttaaa ggcaagaaaa tagaagaaag
     2761 tatacttaaa agataaatac ttttattcat tttttcattt ttaattgcac ttgttaatgc
     2821 ataaagagta tcaactcttg ctagatgttc tttggtgttt ttactcaaga tgctgatgga
     2881 taaatttaga atttttaaat gttttttgta ttgtgcttgt tcgctaagca aaagattgaa
     2941 agcttcgctt agaagattaa tttgctttag atttttgttg attttttgtc ttaacacaaa
     3001 ggattttttg taaaaatttt taacaaaacc accttttaag ataatacctt ctttgtgttc
     3061 taaaaggttt tgaaaatgag tattttgtac tttaaaatct tctaaaatgg atttaataaa
     3121 atttgaaaat tcttctatac tagaaagctt aaattcttca tcttgaagtt tataaatttt
     3181 ttcatcgtta aaaagccaag tttccaaatt taatcccaca taaacaaaaa ttttttgtcc
     3241 ataaatttca ctatagaaag tttctaaatt ctttgcttgt aggatttttt ttagattttc
     3301 gtgtagttct agcattttat ttgcctctta agtgataaaa atttctttta aattgcgtaa
     3361 aagaattatt caaaattgct tcacgcatct ttcttgcaag ttcaagataa taatgtagat
     3421 tgtgcaaact tgccaaacga aaaaaagtaa gttctttagc tttgaaaaga tggttcaaat
     3481 aaccccttga aaaattacga caagtataac atgagcaaac aggatctata gcttcatgat
     3541 tattgataaa ttctgctttt ttgatattaa attttccaaa acttgtgaaa aatgttccat
     3601 ttcttgcatt tctagttggc atcacacagt caaacatatc tactcctcgc tcaacatttt
     3661 ctaccaaatc ttcaggcgtt cctacgccca ttaaatatct tggacgattt tcatctagat
     3721 aagggtttaa gttttggact gtttcgtaca tcaaggcgtt ttcttcgccc acgctaagcc
     3781 cacctatagc caaaccatca aatggcattt catttaaact taaagcgcaa cgctttcttt
     3841 cttcataatc tgtaccacct tggataatac caaaaatatt ttgccctata cctatacctt
     3901 tattttgcat acttttatga taagtaatag cctcttttgc ccaaagtata gtgcgatcaa
     3961 cagaaatttt aaccctttct ttggttgcgg gcagggctac taaatcatct aaaatcatca
     4021 taatatcaga gttaaaatca tattgagtat ctaaaacact ttttggagta aaaagatgac
     4081 gactcccatc gatgtgactt ttaaattcta taccttcgtt aaaatgtttg gaatttttac
     4141 ttaaagaaaa agcctgaaaa ccaccactat cggttaaaaa acttctatca aatttcgtaa
     4201 aaccatgtaa acctccaaaa tcttttacca ctttggaagt tggacgcaag tacatgtgat
     4261 aagtatttgc taaaataatt tttgcatcaa gctcgttttt catatcatta gcatcaagac
     4321 ttttaaccgc tcctactgtg ccaacaggca taaaaacagg ggttaaaaaa gtgctgtgtg
     4381 cggtaatgat ttcacaaacc cttgccattc catctttatg ctttaattta aattccattt
     4441 gttataattt cctttttgga gtttaaaatg aataatattt taattataat agacggtatt
     4501 ttagcaaagc atttcttaga aaggctttgt tttgaaaaag gcttaggtta cttttttaca
     4561 gtagtgtgtc aaaatagtga aaaaaataac ttaaatattt ctagtgagta tattgacttg
     4621 cattattttg atcctacaag cacagcgcgt cttgaaaata ttatgagtaa agattttaaa
     4681 caggctttta tttatatgca agatgaattt gaaactaaaa aaagttatga ggctttgcgt
     4741 tctttaaatc caaatttaga aatagaaata atggattttt gggggttaag tgttaatgat
     4801 actcatgcaa atttagctga tgctagaatg actttaagcc gtagatttat ggatttttta
     4861 ccagatattg ctttaacagc tcagtatata ggacttgggg ttggagagat tatggaagta
     4921 aaaattccag caggatctat ttttgcttat aggcacataa gttcaataca acaaaaaagg
     4981 tggcgcatag tccttattta tagaaattct aagatttatt ttgtaaaacc atcttttgtt
     5041 ttagagccaa atgatagcat tttgatcgtt ggagatcctg ttgttttaca aagtattttt
     5101 cataatataa gaggcaaagc agggcaattt cctatgcctt ttggaagtaa tgtttttgct
     5161 ttaattgata tgaaaaatat gaatcaaaat atgcaagaaa gagtgcttga tactacttta
     5221 aaattaactc aaaaaagcaa tgcaaaaaga ttttttatac atgttatcaa tcctaaatta
     5281 ggggtaatgt atgaaaaatt aaaaaaactt tctgaggata aagaaggtgt gttttttgat
     5341 tatttcaaca cagattttaa acaaatttcc acatggttgc aaaataatga tataggatta
     5401 gttgtaaccg atataaaaaa ttttgagaaa gaaaaacaag ctttttttga tttaaaaatt
     5461 cctattatga aagtgggtga agcttctttt gatgaactta aagaagcgat tattttaagt
     5521 gctgatgaga gtgaacttga aaacaatgca aatgtcatta ctgatttaag taaacagctt
     5581 gattttggag ttattttata ttattataat ccaaattctc aaaatactac agatatggag
     5641 gagtatttta gaagtttatc taagctttat gataaaaata tacaaattat taataaaaat
     5701 gatgaaaacc ctcttttaaa tttgcaatat cgcgaagatt tgttacaatt tgtgagtttt
     5761 caaaaagaat tactaaatag agattttggc agaaatttaa gcacaaattt aaataggcat
     5821 tattataaaa tgagacaaaa ttaccaactt ttcataccag tagaataaat aattaattaa
     5881 atgtgataga ataaacgcaa aaagagtagt tcaatgcaag tagaagttaa gttaaaagaa
     5941 aatgcttata aggtttatat tgatgaactt gaagaattag aatttgatag taaggttttt
     6001 atactttcaa atcctaagat ttcaggtctt catttgaaaa cattactttc taaaattaag
     6061 gcaaaagaaa tttttattgc cactgtaaaa gatggtgaag aatataaaaa tttaagcacc
     6121 atagaagaaa ttttaaacca aatgtttaat tctaaattgg atagaaaaag cgtgcttata
     6181 agttttggcg gtggcgtgat tagtgatatg ggcggatttg ctgctagtat ttatcaaaga
     6241 ggtattgatt ttataaatat tcctactaca cttttagctt gtgttgatgc agcagtaggt
     6301 ggaaaaacag gtgttaataa taattttggt aaaaatctta ttggcacttt ttatcaacct
     6361 aaagctgtat attgcgagag ttctttttta aagactttga gctctagaga acttgctgca
     6421 ggcatggctg aatttattaa aatggcagca atgtttgatg atggtatact tgattttata
     6481 gaaaaaattg atgaaaaaag tttcttaaat gctacttgtg agaatgaaat ttttactcaa
     6541 attatagcaa gaagcataga acttaaatca agggttgttg aacaagatga aaaagaatca
     6601 gggcttagaa tgcttttaaa ttatggtcat acttttgctc atgttataga aaattttaca
     6661 gattataagc tttatttaca cggagaagcg gtagctatag gtatggttat ggcaaatcaa
     6721 ttggctttaa atttagggct tttggataaa atgcaaagtc aaaaaataaa agctatttta
     6781 cttaaattcg gtttgccaat atcatataaa atcaacaatg tagatgaatt ttatgaagct
     6841 tttttcatgg ataaaaaaag ctctaataaa aaaatcaatt ttgttcttgc tagtcctttg
     6901 ggcaagggtt tgataaaagg tgatatttct aaagaagata taattgcaac tttaagagaa
     6961 ttccgatgaa aaaaattatt attttaacct tttttgttgt ttttgctttt ggtgatgtaa
     7021 atcggactat tattaataac ataaatgaga aaattaatac tttaaatact gtaatcagtg
     7081 ctagtatttg gaatatacgt tatgaaaatt ttataaaata tcaagatata aatgatgaat
     7141 taatcatttt aaatcttaat ttaaaaaaga cttccgatat tcaccaacaa gaagaactta
     7201 aacgtaagat agcaaattta gaagagcaat tgagcttgct taaagaatat aaagatttaa
     7261 attttgcaca aagtcttagt gcccctgata atatagaaac tttatctaag cttactaatc
     7321 ctttggctat tataggagct ttttctcata ttaagaaatt aaaaggagaa aaggaagagt
     7381 atatatttaa atttaatgat tttaaaaatt tagtagataa aattagagaa aaaaactcag
     7441 aacttaagga attagttgag cttaaaccaa gtgttgagaa tatagaagct ttaaaagctt
     7501 cggataaaaa gttggaagaa tttgagcaag ctttaaattt tgccagtgtt tcttattctg
     7561 tttatgagaa aaaaattgat gaagagcttt ctcgagtaag tgctgagatt aaagttcaaa
     7621 gcttaagggc tgtaaatata cttgttgcta ttgttattgt tatagctata gcttttatgt
     7681 tgaaatttat tgctaaaaaa tacattaaag atagtgaaag atattatact gctacgaaga
     7741 ttattaattt tattaatata aatattattt ttcttatttt gctctttgct tatatagaaa
     7801 atattactta tcttgtaact atacttggtt ttgcctctgc gggcttagct attgctatga
     7861 aagatatgtt tatgtctatg cttggatggt gtgtgattat ttttggcgga agttttagag
     7921 taggggatcg tgtaaaggtt tttcaaaatg atactaccta tataggagat attatagaca
     7981 tttctttttt acgcattact ctttatgaag agcttacact tgaaacttat aataaaaatc
     8041 gtcgtagtgg gcgtattata tttattccta ataactatgt ttttacaaat ttgcttgcta
     8101 attatactca ccatggtatg aaaaccgtgc ttgatggcat tgatataagt gttacttttg
     8161 atagcaatct tgataaggcg caagaaattg tggaaaatat tgttacacgc catgctaaag
     8221 gttatactga gcttgctaga aaaaatatag ctcgtttaca acatgaatat agtattaaaa
     8281 atcctaaagt ggagccaagg ttttttatgt tttttgaaca ttggggaatg cgaatttctg
     8341 catggtatat gactaatgct tatgcggctt tggtattaag aagtacgatt agcaaagaga
     8401 ttataaaaga atttaataag cataaagata taaaaatcgc ttatccatcg caaaatttat
     8461 atttaggaaa tttaaatcaa aatcattttg aacaacatca tgaaaatacg catttttatg
     8521 caaggaataa agattgaaag aaaaagtttt ttttaaaacc tttgggtgtc gcacaaatat
     8581 ttatgataca gagcttttaa aaagttatgt aaaagattat gagattataa atgatgagaa
     8641 taaagcacaa attatcgttg taaattcttg cacggttaca aatggagctg atagcgggat
     8701 aaagtcttat gtaaatacca tgcaaaaaaa aggcattaaa gttatactta caggttgtgg
     8761 tgctgtaagc aaaggtaagg agcttttaga taaaaaacaa gtttttggag tgcttggagc
     8821 gtcaaataaa gataaaatca atgaattttt aggagcaaag acaagttttt atgaacttgg
     8881 aaatttaaat tttattgata aagatatagt ttgtgagtat gaaaatcata ccaaagcttt
     8941 tgtgaaaatt caagaaggtt gtgattttgc ttgttcttat tgtattatcc ctagcgtgcg
     9001 aggtaaatca agaagtgtag atgaaaaagc tcttttaaaa caagttgaaa ttttgggggc
     9061 taatggctat agtgaaattg ttttaacagg gactaatata ggttcatatg ggcttaaaaa
     9121 tggcacaagt ttaggcaagc ttttgcaaaa aatgggacaa atttcaggta taaaacgcat
     9181 aaggttaggt agtttagaac ccgcacaaat tgatgaaagt tttttagaaa ttttagatga
     9241 gacttggctt gaaaggcatt tacatattgc tttgcaacat acaagtgaaa aaatgcttcg
     9301 cataatgcga agaagatcgc atacggataa tgatttaaag ctttttaata ctatagcaag
     9361 caaaggatat gctttaggga cggattttat agtagctcat ccaggcgaga gtgaagaagt
     9421 gtggcaagaa gctttgaaaa aatttaaaga atttccactc actcatattc atgcttttat
     9481 ttttagtcct agaaacaaca cgcattctgc taccatgaaa gatgtgataa atggaacttt
     9541 agctaaagaa agattaaaca ctttaaaatc catagtagaa aaaaataatt atgaatttag
     9601 aaaaaaaaat caagtttcac ttgaagtttt ggtagaaaat caaaaagatg gtttttttga
     9661 gggttatgat cagtttttta acaagatcaa aattaaaagt gataaagata tagctaaaga
     9721 atggattgtt atatctcaat atgaagtaca agaaaagtct aactttgcaa atttaaaagg
     9781 ctagataatg aaaaataaaa agataatttt agcatctttt atggttttat gtatgctttt
     9841 gggaatttta tattttaaaa atgaacctaa atatatagat gaaaatcttt atcaaagtct
     9901 gttaagtcaa aatttaatcc aaaaagctgt gattgataaa gacgaaattt ggcttaaggc
     9961 ggaaggtgaa aattacgtaa ttataaaaga tggcatagat ataaaaacac ttttagcaaa
    10021 agttcccgta gaagttaaaa aagataacac gctttgggtg ttttttattt tacctgtttt
    10081 tattatcgca ctttttataa gtcttggcta ttttgctcgt aaaaaagagt tagctaaata
    10141 tccaatatca aataagaatc aaaatcacac tcaggcacaa aattcaaata taaatttaga
    10201 aagttctcat ataaaacctg tgatttcaaa tattactttt aatgatgtag caggtgttga
    10261 tgaagttaaa atggagctaa gcgaacttgt ggatttttta caaaatccta aaaaatataa
    10321 agaatttggt gtaaaaatgc caaaaggtgt tttaatggta ggcccacctg gtgtaggaaa
    10381 aacattgata gcaaaagcag ttgcaggaga agcagaggtg ccattttttt atcaaagcgg
    10441 ttcaagtttt gttgaaattt atgtaggtat gggtgcaaaa agagttagag agcttttttc
    10501 aaaagctaaa atgatggctc ctagtatagt ttttatcgat gaaatagatg ctgtaggtaa
    10561 ggcaagagga gaaatgtcaa atgttgaaag agatagcact ttaaatcaac ttttaactca
    10621 aatggatggt tttgaggaca atagtggggt tatagttata gctgcgacaa ataaaatcga
    10681 acttatggat cctgctttat tgcgttcggg gcgttttgat aggagaattt ttttatcttt
    10741 gcctgatttt aaggatagac ttaaaatttt agaaatttat atgaaagata aaaacaataa
    10801 tgtcaattta aataaaatcg ccaaagcaag cgtaggtttt agtggagcag ggcttgaaac
    10861 tttggtcaat gaagcagcaa ttaatgcttt aagaagaaat agtgctttag tcgaggaaag
    10921 tgatttttat gctgtattaa ataaagttct tttaggcaag aaaaagattt taagttttaa
    10981 tgatgaagag aagaaaattc aagccactta tcaggctgca aaagctttga gtgcgtatta
    11041 ttttgacata ggatttgaaa aaatcactct cattgaagat cgttttaaag aatatgagca
    11101 taatataaga tcaaaatcag agcttatcaa tcgtataaaa gtttatttgg ctggttctag
    11161 agctatgaga ttgatttata atgaaagtta tactaactcg caagatgatt ttttaaagat
    11221 taaagaattg cttgattata tgttgagttt tgatatgtta gaagagccaa atttaaatga
    11281 acaaaaaaaa gaaatggatg aatttttaaa ttctatgaag gataaaattt taaaattatc
    11341 agagcttttg cttgaaaaag aaaagataga acatgatgat gttaaaaata taatgcaggt
    11401 ttgattatat tttaatcatc aatttctttg tgcaagatag ttccattaaa atctataaga
    11461 atttttacat cgttatcaag tttaatcttg taatgattga tttttctttc gatttctcta
    11521 gcttttatat ttggaaattc gtttttaatg atattggcta aattttgagg taaaaaatct
    11581 agatcaaaag gaaaggcttt attttcaatt tccttccaag ctccatctat gtcaaattca
    11641 agttctgtcc catcactaag atagacttca taggaatttt tgtctttttg tacgatccct
    11701 atgggtgctt tgaaattatg ttgtaaaaat tctttagaaa cacttggcaa attatcagca
    11761 gaaattatta tatcagcatt taaagataaa cttaaaatag taataatact taaaaattta
    11821 attttca
//
LOCUS       DAPWGO010000048        11661 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.049, whole genome shotgun sequence.
ACCESSION   DAPWGO010000048 DAPWGO010000000
VERSION     DAPWGO010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11661
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.049"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            25..1347
                     /locus_tag="RJ336_001141"
     CDS             25..1347
                     /locus_tag="RJ336_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ5213590.1"
                     /translation="MLIEFRVENFLSIQDEQILSMMASKDNTFFDSHTNGDKKLALLK
                     SSVIYGANASGKSNIVKALQTMKTIVISSANTQRGDKLPITPFLLGDEDDKPTKFEII
                     FIQNDTKYQYGFILNSEKILEEWLLTFDENNTEQNWFERIYNKKEGRYNYSFGDQFLA
                     DEIYKQLWENSTRDNALFLSVAIQLNNEQLKPVFDFFNLKLQIANSNSWGNGKSITIN
                     EYKKDKELVNSFFKIADLDIEGVEIKTSDIDENSLPSNLQNIPQELKEKIIQEVKNIQ
                     NLKNVKILEDISFIHLSQKNQIKFLNFNDESDGTRKFFNIAGIWIDSLKKGNILIIDE
                     LNTHLHPLMTKFLVNLFHNEDLNKSNAQLIFTTHDTSILNQDIFRRDQIWFCEKQNKA
                     TKLYPLSDFEESEERRDKTNLENDYLLGRFGALPYFKEILSSWSDNGN"
     gene            1337..1969
                     /locus_tag="RJ336_001142"
     CDS             1337..1969
                     /locus_tag="RJ336_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RloB domain-containing protein"
                     /protein_id="HDZ5213591.1"
                     /translation="MGTDDLRKKRNTKTRDREAKRKKNEIILIVCEGEKTEKNYLNQL
                     KDFFRLSNVSINIISSKKPNPSQIVEFTKEKNKDYSYNKVYCVFDKDTHSDFDKARQE
                     CEKYKFEAITSNPCFEFWILLHFTYTTKSFSTNSPCNELIESDLKKHIKDYKKDYNFT
                     SIIKQNLSTAIANAQKANKEAEKNNYTSSYTFMDKLALKFQELNSARINQ"
     gene            1966..3177
                     /locus_tag="RJ336_001143"
     CDS             1966..3177
                     /locus_tag="RJ336_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDZ5213592.1"
                     /translation="MTNLPQGWEVKTLSEIGEIVTGSTPSKSNLDFYGKDYPFFKPSD
                     FEQGYFLENAGDNLSKLGFGKARQLPPKTILVVCIGSLGKVALTKVIGSCNQQINAII
                     PHKNIISEYIYYYCISSKFQSILFSKAPQTTLAILNKTEFSKLEIIYPKDIKEQERIV
                     GILDFAFSKIDENIKKAKENLANIDELMQSALQKAFNPLNDNTKENYQLPQSWEWKSL
                     GDTSNYGKTSQVKPSQLKGNDWILELEDIEKESGVLLQKVLFQDRQSKSNKIKFNKGD
                     ILFGTLRPYLKKVIIADDNGACSSEIMPFSTGNSITNHFIYYYLFANFLHDRISSLTY
                     GARMPRLGTKDGKSLQIPLPPLQEQEQIAEHLDFVFEKAKALKELYTKELKDYEELKQ
                     SLLDKAFKGEL"
     gene            3322..4806
                     /locus_tag="RJ336_001144"
     CDS             3322..4806
                     /locus_tag="RJ336_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDZ5213593.1"
                     /translation="MQNKIDKITDILRRDDGISGAMHYTEQIGWILFLKFLDDYETNL
                     KDLAFLDGKDYKSILEEKFSWSVWAAPKKDGKLDVKNALSGSDLLEFVNKELFPYLKN
                     FKNNDDFKSIEYKIGGIFEFIDNRIANGHTLREVINIIDEISFNKEDEVFALGEVYEK
                     LLKDMGSDGGNSGEFYTPRPLIKTMVEVIDPKPKERIYDPSCGSCGFLVESFLHILYK
                     DRTKGKKANLSVEELEFLKNDALFGKEKTPLSYAMGVMNMILHEISNPNIIKTNTLSK
                     KITDITEKDKYEVILANPPFGGKEKEQIQENFPIKSNATELLFLQHILKSLKNNGRCA
                     IIVPEGVLFQNSNAFVSVKKDLLDDFNLECVLSLPSGVFLPYSAVKTNVLFFSKGKKC
                     ICEGDGVYYYELIPPYKLTKNKPLEYAHFKEFLKCYKERKITANSWLVSKKELEERNY
                     DLSAKNPNVKEEKILRTSEEILNSLEENLKTQQEYLNELKSILK"
     gene            complement(4884..5639)
                     /locus_tag="RJ336_001145"
     CDS             complement(4884..5639)
                     /locus_tag="RJ336_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDZ5213594.1"
                     /translation="MQLRQKAREIFEKFFGKVEEKLLFTSDKEFFTNHINFTFGESFV
                     KANLDTQKYFLITLASTLAVGGKIEFKALLQGAIKNDISPIVIKEVIYQATPYVGFAR
                     VCDFLSLCNKVFKKLNIALVLTPQGTTTQENRKIKGREIQNAIFSEANITKMIETTPE
                     DKAFINDFLSANCFGDYYTRMGLDLKTRELLTLVYLISLGGLENQVKAHIQGNLNMEQ
                     SRKDLLNIIAALIPYIGYPKALNALNLLDDIKK"
     gene            complement(5747..6166)
                     /locus_tag="RJ336_001146"
     CDS             complement(5747..6166)
                     /locus_tag="RJ336_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDZ5213595.1"
                     /translation="MQELEKAGIHGSFKGDSKFFSKNVKVSMMFKSNEWRNFSGALVE
                     FEASARSAWHTHPQGQTLIVTEGEIITKVPGQKAFIAKKGDVISCPIGVKHFHGATNT
                     SSGAHIALTGEKEGKNVEWLELVSDEEYENALKEARE"
     gene            complement(6224..7414)
                     /locus_tag="RJ336_001147"
     CDS             complement(6224..7414)
                     /locus_tag="RJ336_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ5213596.1"
                     /translation="MQALNQEKFNSLSDIKIILVLCLGVFGILSTELGMMGIIPIVSQ
                     NFSVSISDAGWSVSIFALVITFCAPIVPLLCANFNPKKLMLICLAVFILSSLTSAFVS
                     EFWQLLILRAIPAFFHPIYIALALSMVANLVEDKKEIPKATAKIFAAVSAGMVLGVPM
                     TSYFGGNFSFKMAMLFFVFLNTLSFIATLFFVPDFKKVNSVKISKQLLILRYPLLWIS
                     ILCVICINAGIWGFYSYFSDFLHSVGKMNFTLISIVLAIYGFSNIIGNYIAGKTLVKN
                     ANFTLILTPLIMIGFYILLFSFYSEIILIIFAFILGILAGVMNNGTHFMISYPFPKAA
                     NFSNGLFISVANIGLSTGTAICGLVISLSDTRYIIVNTIVLLILGIIMIFVRSRIEKM
                     KLRF"
     gene            7563..8468
                     /locus_tag="RJ336_001148"
     CDS             7563..8468
                     /locus_tag="RJ336_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HDZ5213597.1"
                     /translation="MQVFFSTFKEFLYLFVELSVLFIGINILVAFLNAKYSNFFEKHL
                     KQDNFQTRLKAIFFGSLTPFCSCSSIPLLNAFLKAKVPLSVCMAYLITSPLINPIIIV
                     VFIVSFGIKISFIYIGFLYAIILFISFLLSKFDTSKFLNNDFLENEFNEKSSCCSTKK
                     CCSSKTHINLKQICIDSLKEYKKILPYALAGTFIGALIHGVFPSNFFEIYLKDYGILG
                     VFIAAFIGVLLYMNCTAMIPVALVLTQTGIPLGIMMSFLIAGSGCSLPELILLKRNFK
                     TSFLILFALLIILIAILFGILMFFI"
     gene            8478..8795
                     /locus_tag="RJ336_001149"
     CDS             8478..8795
                     /locus_tag="RJ336_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDZ5213598.1"
                     /translation="MQKFLTIISAINDESRVLILHHLLRYKELCVCDLQELLNMGQSR
                     LSRHLKILKDAGFLYVKRKGTWAYYGINNELLKLHSDLFENIKNLDIDNIVLEQNTCE
                     NDK"
     gene            8792..9214
                     /locus_tag="RJ336_001150"
     CDS             8792..9214
                     /locus_tag="RJ336_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphatase family protein"
                     /protein_id="HDZ5213599.1"
                     /translation="MKLAFICIHNSCRSQMAEALARHKAEKMGIDIEVFSAGSDTSKG
                     VNSQAIRLMREIYQIDMKKHYSKLIDSLPQNLDIVVSMGCGVACPSLKSRYYFDFGLK
                     DPSGSYDDEFRKIIQILDYKITALLQAIKTNSLKDFTC"
     gene            9208..10251
                     /gene="acr3"
                     /locus_tag="RJ336_001151"
     CDS             9208..10251
                     /gene="acr3"
                     /locus_tag="RJ336_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite efflux transporter Acr3"
                     /protein_id="HDZ5213600.1"
                     /translation="MLGFIDRFLTLWIFLAIFLGLILGIIFPNIALFWNLFEYKSVNV
                     VLTLCLILMMYPPLAKVDYAKLSKVFDSKKVILLSMILNWFIGPLLMFILAFIFLKDE
                     PLYMQGVIIIGLARCIAMVVVWSDLAKGDREYTSALVAMNSIFQILFFSTLAYIYLDF
                     LPKLLGQSTLATSLDIDFSALSKNVLIYLGIPFLMGFITRTLLLKYKSKRWYENTFLP
                     KISPITLITLLATIIIMCSYKANEVFHLPLEALKIAFVLTLYFIFMFFLTWFISKKNH
                     LSYPKTCSLCFSASGNNFELAIIICIATFGLHSEQAFASIIGPLVEVPVLILLVKWAL
                     GKSLNSKKMNQAS"
     gene            complement(10246..10674)
                     /locus_tag="RJ336_001152"
     CDS             complement(10246..10674)
                     /locus_tag="RJ336_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDZ5213601.1"
                     /translation="MAYTIKKVEKETKISAHTLRFWAKKGLFPFVQKDENSVKYFSKS
                     DIEWAKWIEWLRISGMPIEQVKHYIKLCSLGIKTAKERQEMLKQTKKKLQNQIKTLKE
                     SEKVLSKKIKIYEEMLANEVDGFNPESKDYQPCDKFCKES"
     gene            10753..>11661
                     /locus_tag="RJ336_001153"
     CDS             10753..>11661
                     /locus_tag="RJ336_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HDZ5213602.1"
                     /translation="MLKITKIKRKIMNSIKIKLSLIANLIAIFALIVLGIVSFYFTKT
                     SLHESALKNQTDLLKVTQSTVEDFRSTNQSFTRALEKDITNLPYQSLITEENIINNVG
                     PILKYYRHSINALNVYLGLNNGKVLLSQKSNDAKMPELRDDLDIKTKDWYQEALKTND
                     IFVTPAYLDTNLKQYVITYSKAIYKDGKIIGVLGVDIPSEDLQNLVAKTPGNTFLFDQ
                     KNKIFAATNKELLNPSIDHSPVLNAYKTHGDYNFFTYGLDGKERLGTCTKVFAYTACI
                     TESADIINKPIHKAAFIQAIVVIIVVV"
BASE COUNT         4304 a         1651 c         1705 g         4001 t
ORIGIN      
        1 tttaagaaaa aagtaggaaa aaatatgctt atagaattta gagtagaaaa ttttttatcc
       61 attcaagatg agcaaatttt aagtatgatg gcaagcaagg ataatacttt ttttgattct
      121 cataccaatg gcgataaaaa attagctttg ctaaaaagta gtgtgattta tggggcaaat
      181 gcttctggaa aatcgaatat tgtaaaagct ttgcaaacta tgaaaaccat cgttatatca
      241 agcgcaaata cgcaaagggg agataagtta cctataacac ctttcttgct aggggatgaa
      301 gatgataaac ctacaaaatt tgaaattatt tttatacaaa atgacacaaa gtatcaatat
      361 ggctttattt taaattctga aaaaatttta gaagaatggc ttttaacttt tgatgaaaat
      421 aataccgagc aaaattggtt tgaaagaatt tataataaaa aagaaggaag atataattat
      481 tcttttgggg atcaattttt agctgatgaa atttataaac aactatggga aaatagcact
      541 agagataatg ccttgttttt atctgtggct attcaattaa ataatgagca attaaaacct
      601 gtatttgatt tttttaatct taaactccaa atagcaaatt caaatagttg gggtaatgga
      661 aaaagtatca cgattaatga atataaaaaa gacaaagaat tagtcaatag tttttttaaa
      721 atagctgatt tagatataga aggtgtagag attaaaacaa gcgatattga tgaaaactca
      781 ttaccatcaa atcttcaaaa tattccacaa gaactcaaag aaaaaatcat tcaagaagtt
      841 aaaaatattc aaaatttaaa aaatgtaaaa atactagaag atatatcttt tatacactta
      901 agtcaaaaaa atcaaataaa atttttaaat tttaacgatg aatcagatgg cacaagaaaa
      961 ttttttaata tagcaggtat ttggattgat tctttaaaaa aaggaaacat tttaataata
     1021 gatgagctaa atactcactt acacccttta atgacaaaat tcttagtaaa tctttttcat
     1081 aatgaagatt taaacaaatc aaatgctcag cttattttta ccactcatga tacttccatt
     1141 ttaaatcaag atatctttag aagagatcaa atttggtttt gcgaaaaaca aaataaagca
     1201 accaagcttt atcctttgag tgattttgaa gagagtgaag agagaagaga taaaacaaat
     1261 ttggaaaatg attatctttt agggcgtttt ggggctttgc cttattttaa agaaatacta
     1321 tcatcatgga gtgataatgg gaactgatga tttacgcaaa aaaagaaata caaaaacaag
     1381 agatagagaa gcaaaaagaa aaaaaaatga aattatactt atagtatgcg aaggtgaaaa
     1441 aacggaaaaa aactatttaa atcaattaaa agattttttt agattaagca atgtaagcat
     1501 aaatattatt tcaagtaaaa aaccaaaccc ttcacaaata gtagagttta ccaaagaaaa
     1561 aaataaagat tattcctata ataaagttta ttgtgtattt gataaagata cgcattcaga
     1621 ttttgacaaa gcaaggcaag aatgtgaaaa atacaaattt gaagcaatta cctcaaatcc
     1681 ttgttttgaa ttttggatac ttttacattt tacatacact acaaaatcat ttagcacaaa
     1741 tagtccttgt aatgaattaa ttgagagcga tttaaaaaaa catataaaag attataaaaa
     1801 ggattataat tttacaagca ttataaagca aaatcttagt acagctattg caaatgctca
     1861 aaaagcgaat aaagaagcag aaaaaaataa ctatacaagc tcatatactt ttatggataa
     1921 acttgcactt aaatttcaag aattaaacag cgcaagaata aaccaatgac aaatttaccg
     1981 cagggttggg aagttaaaac gcttagcgag ataggtgaaa ttgttacggg ttcaacacct
     2041 agtaaaagta atttagattt ttatggaaaa gattatccat tttttaagcc gagtgatttc
     2101 gagcaaggat attttttaga aaatgctgga gataatctat caaaactagg ttttggcaaa
     2161 gctagacagc ttccacctaa aacaattctt gtggtttgta taggttcttt aggtaaagta
     2221 gcactaacta aagttattgg gagttgtaac caacaaataa acgcaattat tcctcataaa
     2281 aatataattt ccgagtatat ttattattat tgcatatctt ctaaatttca gtctatatta
     2341 ttttcaaaag caccacaaac aactttagct attttaaata agactgaatt ttccaaactc
     2401 gaaattattt atccaaaaga cataaaagag caagaaagga tagtggggat tttggatttt
     2461 gcttttagta agattgatga aaatatcaaa aaagcaaaag aaaatttagc aaatattgat
     2521 gagcttatgc aaagtgcttt acaaaaggct tttaatccac ttaatgataa tactaaagaa
     2581 aattatcaac tcccacaatc ttgggaatgg aaaagcttag gggatactag caactatgga
     2641 aaaacatcac aagtaaaacc tagtcaatta aaaggtaatg attggatttt agaacttgaa
     2701 gatatagaaa aagaaagcgg tgttttgttg caaaaagtgt tatttcagga tagacaaagt
     2761 aaaagcaata aaattaaatt taacaagggt gatattttat ttggaacatt gcgtccatat
     2821 cttaaaaaag tgattatagc tgatgataat ggggcttgct cttctgaaat aatgccattt
     2881 tctacgggta attccataac aaatcatttt atttattatt atttatttgc caattttttg
     2941 cacgatagaa tctcaagttt aacctatggt gcaagaatgc ctagacttgg aacaaaagat
     3001 ggcaaatccc tacaaatccc cctaccacct ttacaagagc aagagcaaat cgcagagcat
     3061 ttagattttg tgtttgaaaa ggcaaaggct ttaaaagagc tttacactaa agagctaaaa
     3121 gattatgaag agcttaagca atccttactt gataaggctt ttaagggaga attataatgt
     3181 taaaaaattt gccaaatttt aacacattgg cttgatatgt taaaaatttt tgattttttt
     3241 aacatattgc agttcaaaaa caaaaataaa aaataaaact agactttgat aaaactattt
     3301 taaaagcttt aaagggagaa aatgcaaaac aaaatcgata aaatcacaga tattctaaga
     3361 agagatgatg gcataagtgg tgctatgcac tatacagagc agattggctg gatacttttt
     3421 ttaaaatttt tagatgatta tgagacaaat ttaaaagatt tagcgttttt agatggcaaa
     3481 gattataaaa gcattttaga agaaaaattt agctggagtg tttgggcagc gcctaaaaaa
     3541 gatggcaaac ttgatgtaaa aaatgcttta agtggatcgg atttgcttga attcgtaaat
     3601 aaagagcttt ttccttatct taaaaatttt aaaaataatg atgattttaa aagtatagag
     3661 tataaaatcg gtggaatttt tgaatttata gacaatcgca tagcaaatgg acatacttta
     3721 agagaagtga taaatatcat tgatgagatt agttttaata aagaagatga agtatttgcc
     3781 ttaggtgaag tttatgaaaa acttctaaaa gatatgggta gcgatggtgg aaatagtgga
     3841 gaattttaca cccctcgtcc tttgataaag actatggtgg aagtaataga tcctaaacca
     3901 aaagaaagaa tttatgatcc ttcttgtggt agttgtggat ttttagttga gagtttttta
     3961 catattttat ataaagacag aaccaaaggc aaaaaagcaa atttaagcgt agaagagctt
     4021 gaatttttaa aaaatgatgc tctttttggt aaagaaaaaa ctccgcttag ctatgcaatg
     4081 ggcgttatga atatgatatt acatgaaatt tcaaatccaa atatcataaa aacaaatact
     4141 ttaagtaaaa aaataacaga tataacagaa aaagataaat acgaagtaat acttgcaaat
     4201 ccaccttttg gtggcaaaga aaaagaacaa attcaagaaa attttcctat aaaatcaaat
     4261 gctactgaac ttttattttt acagcacatt ttaaaatctt taaaaaacaa cggaagatgt
     4321 gcgatcatcg tgcctgaagg tgtgcttttt caaaattcaa atgcctttgt gagtgtaaaa
     4381 aaagatttac tagatgattt taatttagaa tgcgttttga gtttgccaag tggggtattt
     4441 ttgccttata gtgctgttaa gactaatgtg ctttttttct ctaaaggtaa aaaatgtatt
     4501 tgtgaaggcg atggagttta ttactacgaa cttataccgc cttataaact tactaaaaat
     4561 aagcctttag aatacgcaca ttttaaagaa tttctaaaat gctacaaaga aagaaaaatc
     4621 actgctaatt cttggcttgt tagcaaaaaa gagcttgaag aaagaaacta tgatctaagt
     4681 gctaaaaatc caaatgtaaa agaagaaaaa atcctaagaa ctagcgaaga gattttaaat
     4741 tctttagaag aaaatctaaa aacacaacaa gaatatctaa atgagcttaa aagcatacta
     4801 aaatgattgc aagttttttg ataaaaacta atttacaaat aacttctaag ctcaatttac
     4861 aataaatatt tattgcttgc attctacttt ttaatatcat caagcaaatt tagggcattt
     4921 aaagcttttg gataaccgat atatggaata agagctgcaa tgatatttag caaatctttt
     4981 ctactttgct ccatgttaag attgccttgt atgtgagctt ttacttgatt ttctagccca
     5041 ccaagtgaga taagatatac aagggttaaa agctctctag tttttagatc aagtcccatg
     5101 cgtgtatagt agtctccaaa acaattcgca ctcaaaaaat catttataaa agctttatct
     5161 tctggtgtag tttctatcat tttagtgata ttggcttcac taaaaatagc attttgtatt
     5221 tccctgcctt ttattttgcg attttcttgc gtagtagtac cttgtggagt taaaactaag
     5281 gcgatattta gttttttaaa cactttattg caaaggctta aaaaatcaca tactctagca
     5341 aaacccacat aaggcgtagc ttgataaatc acttctttaa tgacaatagg acttatatcg
     5401 ttcttgattg caccttgaag taaagcttta aactctattt ttccacctac tgctaaagta
     5461 gaagcaaggg tgattaaaaa atatttttgt gtatccaaat ttgcttttac aaaactctcg
     5521 ccaaaagtaa aattaatgtg attagtaaaa aactccttat cgcttgtaaa aagcagtttt
     5581 tcttccactt ttccaaaaaa tttttcaaaa atttctcttg ctttttgtct taattgcatg
     5641 gttttattct ttgtgatttt taaagtttat aaaaaagagc atttaaaata ctcaaaaaaa
     5701 acataaaagt ttttataaaa tttttatgtt ttatttacaa atttctttac tctcttgctt
     5761 cttttaaggc attttcatat tcttcatcgc taacaagctc aagccattct acatttttac
     5821 cctctttctc gcctgtaagt gctatgtgtg ctccactact tgtattagtt gcaccatgaa
     5881 aatgctttac tcctatagga cagcttatga catcgccttt tttagctata aaggcttttt
     5941 ggcctggaac ttttgtgatg atttcgccct ctgttacgat taaggtttgt ccttgaggat
     6001 gagtatgcca tgcacttcta gcactggctt caaattcaac caaagcccca ctaaaatttc
     6061 tccactcatt tgatttaaac atcatagaaa cttttacatt tttgctaaaa aatttactat
     6121 cacctttaaa acttccatga attcctgctt tttctaattc ttgcatttta cctcattttt
     6181 tagtattata aaacatgaga gctactctaa gtcaagtaaa aatttaaaat cttaatttca
     6241 ttttttctat cctacttctt acaaaaatca tgataattcc taaaatcaac aaaacaatag
     6301 tatttacgat aatataacgc gtatcgctca aagaaatcac aagtccacaa atagcagttc
     6361 cggtgcttaa tcctatattg gccacgctta taaaaagtcc attgctaaaa ttagcagcct
     6421 ttggaaaggg ataacttatc ataaaatgcg tgccgttatt catcacacct gctaaaattc
     6481 ctaatataaa ggcaaatatt ataagtataa tttcactata aaaactaaaa agtaaaatat
     6541 aaaatcctat cataattaaa ggtgttaaaa tcaaagtaaa atttgcgttt ttaacaaggg
     6601 tctttccggc tatataattg cctataatat ttgaaaaacc ataaatagcc aatacaatac
     6661 taattaaagt aaaattcatc tttcctacac tatgtaagaa atcagaaaaa taagagtaaa
     6721 aaccccaaat tccagcattt atacaaataa cacaaagtat gctaatccat aaaagtgggt
     6781 atcttaaaat aagcaattgt ttgcttattt ttacagaatt tactttttta aaatcaggaa
     6841 caaaaaataa agttgctata aaagataagg tatttaaaaa tacaaaaaat aacattgcca
     6901 ttttaaaact aaaatttcca ccaaaataac tagtcatagg tacacccaaa accattccag
     6961 cactaactgc tgcaaaaatc ttagctgtag cttttggaat ttctttctta tcttcgacca
     7021 aatttgcaac catacttaga gcaagagcta tataaatagg atgaaaaaaa gcaggaatag
     7081 ctcttaaaat aagcaattgc caaaattcac tcacaaaagc agaagttaac gagcttaaga
     7141 taaacacagc taaacaaata agcataagtt ttttaggatt gaaatttgca caaagtagcg
     7201 ggacaatagg agcacaaaaa gtaatcacaa gtgcaaaaat acttacactc caacctgcat
     7261 ctgaaatact tacactaaaa ttttgagaaa caataggaat tatacccatc atccctagct
     7321 ctgtgcttaa aatcccaaat acgcctaaac acagcactaa aataattttt atatccgata
     7381 aagaattaaa tttttcttga ttcaaagctt gcatttttgc cctttatttt aaaatttttg
     7441 caattataaa agatgagagt agctctaagt caagtggtaa tttataaaat caatatataa
     7501 atatatcttg atatattaat aaatttatat tacactgctc taaaaatttt ttaggaaaaa
     7561 caatgcaagt attttttagc acttttaaag agtttttgta tctatttgtc gaactttctg
     7621 tactttttat aggaatcaat attttagttg cttttttaaa tgcaaaatat tcaaattttt
     7681 tcgaaaaaca tttaaagcaa gataattttc aaacacgcct aaaagctata ttttttggtt
     7741 ctctaacgcc attttgttct tgctcatcaa tcccactttt aaatgctttt ttaaaagcca
     7801 aagtaccact tagcgtttgt atggcctatc ttatcacttc gcccttaata aatcctatta
     7861 taattgtagt ttttatagtc agttttggga ttaaaatttc attcatttat ataggatttt
     7921 tatatgcaat tattttattt atttcatttt tattgtcaaa atttgacaca agcaaatttt
     7981 taaataatga ttttttagaa aatgagttta acgaaaaaag tagttgttgc agcacaaaaa
     8041 aatgttgttc tagcaaaact catataaatc ttaaacaaat ttgtatcgat agcctgaaag
     8101 aatataaaaa aattttaccc tatgctcttg cgggaacttt tattggggca ttaatacatg
     8161 gggtttttcc aagtaatttt tttgaaattt atttaaaaga ttatggaatt ttaggagtat
     8221 tcatcgctgc ttttataggt gttttgcttt atatgaattg cacagcaatg atacctgtgg
     8281 ccttggtttt aacccaaaca ggaattcctt tgggaatcat gatgagtttt ttaattgcag
     8341 gatcgggttg ttctttacct gaattaattc tacttaaaag gaattttaaa acaagttttt
     8401 taatactttt tgcccttttg attattttaa ttgctatttt atttggaatc ttaatgtttt
     8461 ttatataaag gattttaatg caaaagtttt taaccattat ttcagcaatc aatgatgaaa
     8521 gtagggtttt gattttgcat catcttttaa gatacaaaga actttgtgtt tgtgatctac
     8581 aagagctctt aaacatgggt caatcaagac tttcaagaca tttaaaaatt ttaaaagatg
     8641 caggattttt atatgtcaag cgtaagggaa cttgggcgta ttatggtatc aacaatgagc
     8701 ttttaaaact gcattctgac ctttttgaaa atattaaaaa tctagatatt gacaacatag
     8761 ttttagaaca aaacacttgc gagaacgata aatgaaactt gcatttattt gtattcacaa
     8821 tagctgccgt tctcaaatgg cagaagcact agctaggcat aaagctgaaa aaatgggcat
     8881 agatatcgaa gtattttccg caggaagcga cacttctaag ggtgtaaatt cacaggctat
     8941 aagacttatg cgtgaaattt atcaaatcga tatgaaaaag cattattcta aactcattga
     9001 ttctttgcct caaaatttag acatagtcgt aagtatgggt tgtggcgtgg cttgtcctag
     9061 cttaaaatca aggtattatt ttgattttgg attaaaagat cctagcggaa gttatgatga
     9121 tgaatttagg aaaataattc aaattttaga ttataaaata acagctcttt tacaagccat
     9181 aaagacaaat tctcttaagg actttacatg ttaggtttta tcgatagatt tctcacgctt
     9241 tggatatttt tagctatttt tttgggttta attttaggta tcattttccc caatatcgct
     9301 ttattttgga atttatttga gtacaagtct gtaaatgtag tattgacttt atgtcttatt
     9361 ttgatgatgt atccgccttt ggctaaggtt gattatgcaa agctttcaaa ggtatttgat
     9421 tctaaaaaag ttatcttgct ttctatgatt ttaaattggt ttataggccc tttgcttatg
     9481 tttatcttag cttttatttt cttaaaagac gagcctttat atatgcaagg agttatcatc
     9541 atcggcttgg caagatgtat cgcaatggtg gtggtatgga gcgatttagc aaaaggtgat
     9601 agagaataca ccagtgcttt agtagcgatg aatagcattt ttcaaatttt atttttttcc
     9661 actttggctt atatttatct ggatttttta ccaaaattac taggtcaaag cactttagct
     9721 acaagtttag atatagattt ttcagctcta agtaaaaatg ttttgattta tttaggaatt
     9781 ccttttttaa tgggctttat aacaagaacc ctacttttaa aatacaaaag caaacgatgg
     9841 tacgaaaata cctttttacc taaaatcagc cctataactc ttatcaccct gctagcaact
     9901 attatcatta tgtgttctta caaagcaaat gaagtatttc acctgccttt agaagcttta
     9961 aaaatagcct ttgttttgac tttgtatttt atcttcatgt tttttctaac ttggtttatt
    10021 tctaagaaaa atcatctttc ttatcctaaa acttgttctt tatgctttag tgctagtgga
    10081 aataactttg aattagctat aatcatttgt attgctactt ttgggcttca ctcagaacaa
    10141 gcttttgcaa gcattatagg ccccttagta gaagttcctg tacttatctt acttgtaaaa
    10201 tgggcattag gcaaaagttt aaattctaaa aaaatgaatc aagcctcatg attctttaca
    10261 aaacttatca caaggttgat agtccttgct ttctggatta aacccatcga cttcatttgc
    10321 aagcatttct tcataaattt ttatcttttt gcttaaaact ttttcacttt cttttaatgt
    10381 tttaatctgg ttttgtaatt ttttctttgt ttgctttaac atctcttgtc tctctttggc
    10441 agtttttata cccaaagagc aaagttttat ataatgtttg acttgttcta ttggcatacc
    10501 tgaaattcta agccattcta tccattttgc ccattctata tcgctttttg aaaaatattt
    10561 cacactattt tcatcttttt gaacaaaagg aaacaaacct tttttagccc aaaatcttaa
    10621 agtatgagca ctaatttttg tttctttttc tacttttttt atagtataag ccatattttc
    10681 tcctttttaa gataaaaata aaaatttatt ttattttttt tgtgataaaa taatagccaa
    10741 attattagtt ttatgctaaa aataacaaag attaaaagga aaataatgaa tagtattaaa
    10801 atcaaacttt ccctcattgc aaatttaatt gcaatttttg ccttaattgt tctaggtatt
    10861 gtaagttttt attttacaaa aacctcacta catgaaagcg ctcttaaaaa tcaaactgat
    10921 ctacttaaag tcacacagtc taccgttgaa gatttccgtt ccacaaatca atcttttact
    10981 agagctttag aaaaagatat cacgaactta ccttatcaat ctttaatcac tgaagaaaat
    11041 attattaaca atgttggtcc aatattgaaa tattatcgtc atagtataaa tgcactaaat
    11101 gtttatttag gtttaaacaa tggaaaagtt ttacttagtc aaaaatctaa tgatgcaaaa
    11161 atgcctgaat tacgtgatga tttagatata aagacaaaag attggtatca agaagcctta
    11221 aaaacaaatg atatttttgt tacaccagca tatttagata caaatttaaa acaatatgta
    11281 ataacgtatt ctaaagctat ttataaagat ggcaaaatca taggagtact gggtgtcgat
    11341 ataccatcag aagatttgca aaatttagtt gcaaaaactc ctggaaatac ttttttattt
    11401 gatcaaaaaa ataaaatatt tgcagcaacc aataaagaat tattaaatcc atccattgat
    11461 cattctcctg ttctaaatgc atataaaaca catggagact ataacttttt tacttatgga
    11521 ttagacggca aagaaagact tggaacttgt actaaagtct ttgcttatac agcttgtatt
    11581 accgaaagcg ctgatattat aaataaacct attcataaag ctgcatttat tcaagccatt
    11641 gttgtcatta ttgtagtagt a
//
LOCUS       DAPWGO010000049        11634 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.050, whole genome shotgun sequence.
ACCESSION   DAPWGO010000049 DAPWGO010000000
VERSION     DAPWGO010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11634
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.050"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..895)
                     /gene="sppA"
                     /locus_tag="RJ336_001154"
     CDS             complement(<1..895)
                     /gene="sppA"
                     /locus_tag="RJ336_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDZ5213603.1"
                     /translation="MQILKSFFKALGCGIKFINTYFKTFVLLLIVIWILMPSANSSSN
                     LANLERIDLKGEIFDSSAVLEKIINAKNDSNIKGVLFVVDSPGGAFAPSMELALAIKD
                     LKIKKPVLVYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSGLANKLGI
                     KEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQSYDLFTGFVAKERALDLNKKDQWA
                     NARVFLAAKAKELGLIDELSNYENAKKELEKLANVSNPVWKEEDKIDKFLNRLEGQTS
                     SLISKSLIEIAYKTNSSFINAR"
     gene            complement(883..2112)
                     /locus_tag="RJ336_001155"
     CDS             complement(883..2112)
                     /locus_tag="RJ336_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDZ5213604.1"
                     /translation="MFIAAARYLFLCDEDFTILENQAFVFEDKILELGELDNLRKKYP
                     KAKIIKTPKNSVILPAFINPHTHLEFSANSTTLHFGEFLIWLKSVINSRSMLNAQAKE
                     ELILQSIKKMQKSGIGTIGEISSFGSDLDPCLKASQKGIRVVFFNEILGTNENQVEDK
                     KQEFLKRFENSLKFKNDFFIPAISIHSPYSTHPSLAYFALDLAKKQNLLVSTHFLESK
                     AENIWLRESKGGFKKWLENFTLHPKPLYAPKDFAKLFKGVRTLFTHCVYLKEYEWLDK
                     NLHSITHCAFSNRLLSQKSLDLKTALKSGLNIHLGTDGLSSNISLSLLDEMRANLLIH
                     KNFDLLELASKLLQMATLYPARALNLNLGELKKGKIADFSVFELGECDKKQAPLQFIL
                     NAKEVDKLFIKGKECKF"
     gene            2203..2682
                     /gene="aroQ"
                     /locus_tag="RJ336_001156"
     CDS             2203..2682
                     /gene="aroQ"
                     /locus_tag="RJ336_001156"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HDZ5213605.1"
                     /translation="MKIMIIQGPNVNMLGVREVGIYGAMKMEEIHEQMKLAASQNNVE
                     LDFFQSNFEGEIVDKIQECLGTVDGIIINAAGYTHTSVAIRDAIAAVALPTIEVHISN
                     VYRREEFRQKSLIAPVCSGTIVGFGPFGYHLALMGIIQICEQIKNLRAMQQAQQTNK"
     gene            2685..3158
                     /gene="folK"
                     /locus_tag="RJ336_001157"
     CDS             2685..3158
                     /gene="folK"
                     /locus_tag="RJ336_001157"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDZ5213606.1"
                     /translation="MLKIQGVKHFEKSRFFPFFSQNIRSFKYLALIGLGSNIEPEKKR
                     FDMLFRVMMDDKRFKILSTSPMLINEAFGFKEQKDFTNAVMLIQTNLHARALLKVLLY
                     YEVKFKRKRTFKNAPRTLDLDLLYFSQKVKRDKWCEVPHKGAKERVSVILPLGMI"
     gene            3168..4622
                     /gene="flhF"
                     /locus_tag="RJ336_001158"
     CDS             3168..4622
                     /gene="flhF"
                     /locus_tag="RJ336_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HDZ5213607.1"
                     /translation="MGQLIHTFTVEDTEQIIPKVKEDYGDKALIITNKQIRPKTLNRS
                     ALYEVMVAIEESDYEEHLKKQGKSLPAKKSSPKPSSTSLAEEKIRSQIPQEDEDVVLD
                     FSNTRLNTNLNTVKNNDLTKKTYQDFPQNKINPHQNKTLGFDDFKEKLSEVSNEISKV
                     TNTPLENYTPNPNYNKKIENFEKQFEKQINKLNDKIDLLADMMWDDKAEARKNLMIPP
                     EFASIYKQAKESGMLENHLEAIMKATIENMPAAMKTNKDAVQRYFHSLLRNILPCRVE
                     SDIKKQKIMMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQY
                     AKMMKLPIIDSIEPKDLDEAIKSLNNCEVILVDTIGNSQYDQSKLAKTKEFLMHSNAE
                     IDVNLVVSANTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLIYETNIPLSF
                     FSTGQEVPDDLEVANSDFLVHCILEGFNKGKNNE"
     gene            4615..5481
                     /gene="flhG"
                     /locus_tag="RJ336_001159"
     CDS             4615..5481
                     /gene="flhG"
                     /locus_tag="RJ336_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis ATPase FlhG"
                     /protein_id="HDZ5213608.1"
                     /translation="MNNQANKLRNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANL
                     ANVLANNGYKVGLFDADIGLANLDVILNVRIQKNLLHVLRGECSLEDILIEVKPNLWL
                     IPGESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVIV
                     VTVPDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPL
                     NLEFLGHLSASKDVSGSIKKRTLFSDENTASSDELKALASKLLYRLERKVLDNVSNRS
                     FSSFFRKIIERF"
     gene            5500..5856
                     /locus_tag="RJ336_001160"
     CDS             5500..5856
                     /locus_tag="RJ336_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213609.1"
                     /translation="MRPENYVAFFTVCGFFIGLAFSIISIDEAFDILIFTCFITFMFY
                     VFVHIAIMNFIDVKKISGRIFNKHDYEKTSNNIINDLVIREKKMDIILEKLNEEREEL
                     KKNESKERRRNAKRAA"
     gene            5837..6529
                     /locus_tag="RJ336_001161"
     CDS             5837..6529
                     /locus_tag="RJ336_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HDZ5213610.1"
                     /translation="MLKEPPKAYAQMLKKEQDELVLSYMPALRAMAFRLKERLPSSID
                     VNDLISIGVEEMIKLSRRYDKEQNNNFWGFARKRVNGSMLDYLRSLDVMSRNNRKIIK
                     DIDAIMDEYFLENECEPDDEYLAKKLDLDVEKIKEVRTAHAISYTLPIDEQIELYNED
                     NTLEKIEKEELLEKIHEVLDDLKERDQLIIQLYYYEELSLKEISEILQISESRISQIH
                     KKLLKKLRERLV"
     gene            6529..7608
                     /gene="fliM"
                     /locus_tag="RJ336_001162"
     CDS             6529..7608
                     /gene="fliM"
                     /locus_tag="RJ336_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HDZ5213611.1"
                     /translation="MAEILSQEEIDALLEVVDDNTDTPIASNSKDEKDERNIVVYDFK
                     RPNRVSKEQLRTIKGIHDKLARNLASQISSMMRSIVETKLHSVDQMTYGEFLMSLPSP
                     TSFNVFSIKPLDGNCVLEINPSIAFPMIDRLLGGQGDSYEASRELTDIELNLLDSILR
                     IIMQRLKESWATVTEIYPSIEAKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMVNIC
                     YPVVHLESILSRLANRDIMMGETSAKKSRNKELKTLIGRAEVVYEAILGKTLINVHEF
                     LELKQGDILRLDREADDKAIVSIDKKDVFLAQIGLHRFRKSIKILELIRTDKDEIKEI
                     LEKYEEERKAKASVYDEPEEEDEEI"
     gene            7605..8447
                     /gene="fliY"
                     /locus_tag="RJ336_001163"
     CDS             7605..8447
                     /gene="fliY"
                     /locus_tag="RJ336_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliY"
                     /protein_id="HDZ5213612.1"
                     /translation="MINDFLKMFTNECISTIEGLTGKSAEFSEYKEFDVNASDTLKAP
                     LVYAIFDIANGGKIGILAGAVLMSAIGEWMMGEEEITKNDKLGPDEMDAAKEAIQNII
                     SAFSTTLGAQKDIPKMDFSIESCEFVPESVDFKDFKKLFLYDVKIGDLEEQVSLAMDQ
                     TLHNILSGKPAETGNTSTDSNHNAEEKAIMLSEELKNINLIMDVRLPVRVRIGNKKML
                     LKDVLTMDIGSVVELNQLANDPLEILIGDKRIAYGEVVIVDGNFGVQITEIGSKKERL
                     EQLR"
     gene            8516..9121
                     /locus_tag="RJ336_001164"
     CDS             8516..9121
                     /locus_tag="RJ336_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HDZ5213613.1"
                     /translation="MDTKIIKDVEKFENIPDLEKAITFFGSARLKEDNFYYQQAKILA
                     QKCAQNGFCVISGGGGGIMRAANEGAFSQKNNTNSMSSVGFNIFLPHEQKLNDFVEYN
                     ITFESLAIRKMALIEKSLAFVIFPGGFGTLDELCEILTLKQLEFKKDVPIILFGSEFW
                     RGFDEFVRNSLLKLEVISKGDELKYKITDDLDFIINTLKEI"
     gene            9121..10137
                     /gene="mnmA"
                     /locus_tag="RJ336_001165"
     CDS             9121..10137
                     /gene="mnmA"
                     /locus_tag="RJ336_001165"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDZ5213614.1"
                     /translation="MKILVAMSGGVDSTVTAYKLKNLGHEVIGCYMKLHGKPNYHEEN
                     IKKVEKVANFLQIPYHILDLQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLL
                     EFAKSLGCEKLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKK
                     EDVKKFASTIEVLKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGEVLDSSGKVVGK
                     HEGYMHYTIGKRRGFEVRGAHEPHFVLKINPKQNQIIVGTKEELKISEFNLKNINLFI
                     DAKELDCEVKIRYRSKSTPCKVEIYEDKSAKIILKDPVYGLASGQMAVFYDHDKVIAS
                     GFIE"
     gene            complement(10165..10416)
                     /locus_tag="RJ336_001166"
     CDS             complement(10165..10416)
                     /locus_tag="RJ336_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDZ5213615.1"
                     /translation="MFFVFLVQLALGAPPLLYAFIMIASGNVMMALTHYAIGTAPVIF
                     GTGCVTLKKWWSIGFVISIVDIVVMIAVGLIWWKILGFY"
     gene            complement(10634..10849)
                     /locus_tag="RJ336_001167"
     CDS             complement(10634..10849)
                     /locus_tag="RJ336_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDZ5213616.1"
                     /translation="MFITATAPNPLVLYFLSPLEIKSTPNASTFTKDKLKELVKMKNS
                     EKIMLSVFVSLLLLWAGALGLFFWNFS"
     gene            complement(10792..11136)
                     /locus_tag="RJ336_001168"
     CDS             complement(10792..11136)
                     /locus_tag="RJ336_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDZ5213617.1"
                     /translation="MARGVIKTGLGEHLAYHFISILGKKTLGIAYSIAFCETILAPVT
                     PSNTARAGAIINPIVQVIARSFKSTPEDGTQNKIGTYLSLVNYQEPILFHQLCLLQLQ
                     LQILWCFIFSLR"
     gene            complement(11359..11508)
                     /locus_tag="RJ336_001169"
     CDS             complement(11359..11508)
                     /locus_tag="RJ336_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:sulfate symporter"
                     /protein_id="HDZ5213618.1"
                     /translation="MEDNSWHFLGLFIAVIMAVILQVMPLGPVCMIAIAIVALSGITT
                     TQLKI"
BASE COUNT         4327 a         1760 c         1942 g         3605 t
ORIGIN      
        1 atctagcgtt tataaaactg ctattagtct tataagcgat ttcgattaag cttttactta
       61 tcaagcttga tgtttgtcct tctaggcgat taagaaattt atcaatctta tcttcttctt
      121 tccaaacagg atttgaaaca ttagcaagtt tttcaagctc ctttttagca ttttcataat
      181 tactaagctc atctataaga ccaagctcct tagctttggc agctaaaaac actcttgcat
      241 ttgcccattg atctttttta ttaagatcta atgctctttc cttggcaaca aaacctgtaa
      301 aaagatcata actttgatca attaaaccct gtaaaaaatt tctttcattc tcattccaag
      361 ctcttgcaaa agttccagca cttttaaatt cacctgcttg aatagtttgt tctttaatac
      421 cgagtttatt agccaatccg cttaaatcag ctccttgcat aatcacaccg atagagccta
      481 taaaacttgc tggattggct aaaattttat tagctccaac tcctgctaaa taacttccgc
      541 ttgccatagt tccgcttgca taaacaagca caggcttttt aatttttaaa tcctttatag
      601 ctagagctag ttccatacta ggagcaaaag ctccaccagg agagtctaca acaaaaagca
      661 ctcctttaat attgctatca tttttagcat tgataatttt ttccaaaacc gcagagctat
      721 caaaaatttc accctttaaa tcaatgcgtt ctaaatttgc aagattggag cttgaatttg
      781 cactaggcat taaaatccat ataacaatca acaataaaac aaaggtttta aaataagtat
      841 tgataaattt tataccgcat cctaaagcct taaaaaatga ttttaaaatt tgcattcttt
      901 tccttttata aataatttat ccacttcctt agcatttaaa ataaactgca aaggagcttg
      961 ctttttatca cattctccta gctcaaatac gctaaaatca gcaattttac cttttttaag
     1021 ctctcctaaa tttaaattta aagcccttgc aggataaagc gttgccattt gcaaaagctt
     1081 agaggctaac tctaataaat caaaattctt atgtataagc aaattcgcgc gcatttcatc
     1141 aagtaaggac aatgaaatat ttgagctaag tccatcggtt cctaaatgga tattcaatcc
     1201 actttttaaa gctgttttta aatctaagct tttttgactt aaaaggcgat ttgaaaatgc
     1261 acaatgtgta atagaatgta aatttttatc caaccattca tattctttta gataaacaca
     1321 atgcgtaaaa agagtcctta ctcctttaaa gagtttagca aaatcctttg gtgcataaag
     1381 aggcttagga tgaagtgtga aattttcaag ccatttttta aacccccctt tagactctct
     1441 aagccagata ttttcagcct tgctttctaa aaaatgcgtg ctaactagta aattttgctt
     1501 tttagctaaa tcaagagcaa aataagccaa actaggatga gttgaataag gagaatgaat
     1561 cgaaattgct gggataaaaa aatcattttt aaatttcaaa gaattttcaa atctttttaa
     1621 aaattcttgt tttttatctt caacttgatt ttcatttgta cccaaaattt cattaaaaaa
     1681 tactacacgt ataccctttt gactagcctt taaacaagga tctaaatcac tcccaaaact
     1741 tgaaatttca cctatagtgc ctataccgct tttttgcatt tttttaatgc tttgaagtat
     1801 taattcttct ttggcctgcg catttaacat ggaacgagaa tttataacac ttttaagcca
     1861 aattaaaaat tctccaaaat gtaaagttgt tgaatttgca ctaaattcta agtgtgtgtg
     1921 aggatttata aaagcaggta aaataaccga atttttaggt gttttgataa ttttagcctt
     1981 gggatatttt tttcttaaat tatccaattc acccaattct aaaattttat cttcaaaaac
     2041 aaaggcttga ttttctagta ttgtaaaatc ttcatcgcat aaaaaaagat atcttgcagc
     2101 agctataaac acgattttcc tttcaaaaat tacattgtag caaaaattta tttttaaaat
     2161 gttataataa aaggttaaaa ataaattttt aaggttaaat ccatgaaaat aatgattatc
     2221 caaggcccaa atgttaatat gcttggcgta agagaagtgg gaatttatgg tgctatgaaa
     2281 atggaagaaa ttcatgagca aatgaaactt gcagcatcgc aaaacaatgt agaacttgac
     2341 tttttccaaa gtaattttga aggtgaaatc gtagataaaa ttcaagaatg ccttggaaca
     2401 gttgatggaa ttattatcaa tgcagcaggc tatactcata cttcagtagc tattcgcgat
     2461 gctattgcag cagtagcttt acctacaatt gaagtacata ttagcaatgt ttatcgcaga
     2521 gaagaatttc gtcaaaaaag tcttatagcg cctgtatgtt ctggaactat tgttggtttt
     2581 ggtccttttg gctatcactt ggctttaatg ggtataattc aaatttgcga acaaataaaa
     2641 aatttgcgcg cgatgcaaca agcacaacaa acgaataaat aataatgcta aaaattcaag
     2701 gagtaaaaca ctttgaaaaa agtcgttttt ttcctttttt tagtcaaaat atacgatctt
     2761 ttaaatattt agctcttata ggcttaggaa gcaatataga gcccgaaaaa aaaagatttg
     2821 atatgctttt tcgagtaatg atggatgata aaagatttaa aattttatcc acatctccta
     2881 tgttgataaa tgaagccttt ggttttaaag agcaaaaaga ttttaccaat gctgttatgt
     2941 tgatacaaac taatttgcat gcacgagcac ttttgaaagt tttactttat tatgaagtaa
     3001 aatttaaacg caagagaact ttcaaaaacg ctcctagaac gcttgattta gatcttttat
     3061 acttttcaca aaaagtcaag cgtgataagt ggtgtgaggt gcctcataaa ggggctaaag
     3121 aaagagtgag tgtaattttg cctttaggca tgatataagg aatataaatg ggacaactta
     3181 tacatacttt tactgttgaa gatacagaac aaattatacc caaagtaaaa gaagattacg
     3241 gagataaagc tttaattata acaaataaac aaattcgtcc taaaacctta aatcgcagtg
     3301 cgctttatga ggttatggta gccatagaag aaagcgacta tgaagaacac ttaaaaaaac
     3361 aaggaaaatc tttacctgca aaaaaaagct cgccaaaacc atcttctacc tctcttgcag
     3421 aagaaaaaat tagatctcaa atccctcaag aagatgaaga tgtagtcttg gatttctcaa
     3481 acactcgctt aaatacaaat ttaaacactg taaaaaacaa tgacttaact aaaaaaacct
     3541 atcaagattt tccacaaaac aaaatcaacc ctcatcaaaa taagactcta ggctttgatg
     3601 attttaaaga aaaactaagt gaagttagca atgaaatttc taaagtcaca aacacacctt
     3661 tagaaaatta cacccctaat ccaaattata ataaaaaaat agaaaatttt gaaaagcaat
     3721 ttgaaaaaca aatcaacaag cttaacgata aaatagatct tcttgcagat atgatgtggg
     3781 acgataaagc tgaagctaga aaaaatctta tgatacctcc tgaatttgca agtatttata
     3841 aacaagccaa agaaagtgga atgcttgaaa atcatctaga agcgattatg aaagcaacta
     3901 tagaaaatat gccagctgct atgaaaacca acaaagatgc ggttcaaaga tattttcact
     3961 cacttttaag aaatatcttg ccttgtcgtg ttgaaagcga tataaaaaaa caaaaaatca
     4021 tgatgctagt aggcccaaca ggagtcggaa aaacaacaac cttagctaag ttagcttttc
     4081 gctatgctta tggagataag cgttataaaa caggtattat tacgcttgat acttatagaa
     4141 tcggtgcggt tgagcaactt tttcagtatg caaaaatgat gaaacttcct attattgata
     4201 gcatagaacc aaaggattta gatgaagcga taaaaagctt aaataattgc gaagtaattt
     4261 tagttgatac tataggaaat tcacaatacg atcaaagcaa acttgctaaa actaaagaat
     4321 ttttaatgca ctcaaatgca gaaattgatg taaatttagt ggtttctgca aacaccaaac
     4381 atgaagattt aatggaaatt tataaaaatt tttcattctt aaatattgat actttgatta
     4441 ttactaaatt tgatgaaaca aaggtttttg gaaatatctt ctctcttatt tatgaaacaa
     4501 atattcctct aagctttttc tctacaggac aagaagtgcc agatgattta gaagtagcca
     4561 atagtgattt tctagttcat tgtattttag aagggtttaa caaaggaaaa aataatgaat
     4621 aaccaagcaa ataaacttcg caatctcatg agtcaaaatg gaaccaaaaa atcccaaaac
     4681 actcatttta tagctattac aagtggaaaa ggtggcgttg gaaaaagtac gattagcgca
     4741 aatctagcca atgttttagc aaataatggc tataaagttg ggctttttga tgctgatatt
     4801 ggcttggcaa atttggatgt cattttaaat gtacgcatac aaaaaaatct cttgcatgtt
     4861 ttacgcggag aatgttcttt ggaagatatt ttaatagaag ttaagccaaa tttatggctc
     4921 atcccaggcg aaagtggaga tgagatttta aaatataatg ataaaaatat ttacgagaga
     4981 tttttaaatc aagcaagtat tttagatgag cttgattttc ttattatcga cacaggtgcg
     5041 ggtattggtg gaaatatttt aaatttttta gaaatggctg atgaagttat agtagtaact
     5101 gttcctgatc ctgcagcaat cactgatgcg tatgcaacca taaaaacaac ttctaagaca
     5161 aaagaaaatt tactaatgct ctttaatgtt gtaaaaaatg aaaatgaagc tttaaaagtt
     5221 tttgaaaata ttaaaaaagt tgcagatgca aacattaaaa atcctttaaa tttagaattc
     5281 ttaggtcatt taagcgcttc taaagatgta agtggtagta ttaaaaaaag aactttattt
     5341 agcgatgaaa acacagcctc aagtgatgag cttaaagccc tagcctccaa gcttttatat
     5401 agattggaac ggaaagtgct tgataatgtt tcaaatcgta gtttttcaag tttttttaga
     5461 aaaattattg aaagatttta gcaataaaga gaagagatta tgaggccaga aaattacgta
     5521 gcatttttca ctgtttgtgg attttttata ggacttgcat ttagcattat tagtatagat
     5581 gaagcctttg atatactgat ttttacttgt tttattactt ttatgtttta tgtttttgtt
     5641 catattgcta ttatgaattt tatagatgta aagaaaatta gtggcagaat ctttaataaa
     5701 cacgattatg aaaaaactag caataatatt atcaacgatt tagttattcg tgaaaagaaa
     5761 atggatataa ttttagaaaa gctcaatgaa gaaagagaag agctaaagaa aaatgaatcc
     5821 aaagaaagac gaagaaatgc taaaagagcc gcctaaagct tatgcacaaa tgctaaagaa
     5881 agagcaagat gagcttgtac tttcttacat gccagctcta cgtgctatgg cttttagact
     5941 aaaagaacgc ttgccttcaa gcatagatgt taatgatctt attagcatag gcgttgaaga
     6001 aatgataaag ctttcacgcc gttacgataa agaacaaaat aataacttct ggggttttgc
     6061 aagaaaaaga gttaatggct ctatgcttga ttatcttaga agtcttgatg taatgagtcg
     6121 caataatcgc aaaattatta aagatattga tgcaatcatg gatgaatatt tccttgagaa
     6181 tgaatgcgaa cctgatgatg agtatctagc caaaaaactt gatttagatg tagaaaaaat
     6241 caaagaggta agaacagctc atgctattag ctataccctg cccatcgatg agcaaatcga
     6301 actttataac gaagacaata ctttagaaaa aattgaaaaa gaagaacttt tagaaaaaat
     6361 tcacgaagtg ctagatgatc ttaaagagcg cgatcagtta attattcagc tttattatta
     6421 tgaagaatta agcctaaaag aaatcagtga aattttacaa atcagtgaaa gcagaatttc
     6481 acaaattcac aaaaaacttc ttaaaaaact tagagaaagg ctagtgtaat ggctgagata
     6541 ctttcccaag aagaaattga tgctctactt gaagttgtcg atgataacac cgacacaccc
     6601 atagcctcaa attcaaaaga tgaaaaagat gaaagaaata tcgttgtata cgattttaag
     6661 cgtccaaaca gagtttcaaa agaacaactt aggacgatta aaggcataca tgataaattg
     6721 gcaagaaatt tagcctctca aatttcatca atgatgagaa gtattgttga aactaaactt
     6781 cattcagtcg atcagatgac ttatggagag tttttaatgt ctttgccaag cccaacaagt
     6841 tttaacgttt tttctatcaa acctttagat ggaaactgtg ttttagaaat caatccaagc
     6901 atagcttttc ctatgataga caggctttta ggtggtcaag gcgatagcta tgaagcttcg
     6961 cgtgagctta cggatattga gcttaatttg cttgattcta ttttgcgtat cattatgcaa
     7021 agacttaaag aaagttgggc tactgtaact gaaatttatc ctagtataga agctaaagaa
     7081 tcaagtccaa atgttgtgca aatcgtatct caaaatgaga ttgttatcat ggtagtaatg
     7141 gaaatcatca taggaaattc aagcggtatg gtaaatatct gctatcctgt agtgcattta
     7201 gaaagtatat taagccgttt ggcaaaccgc gacattatga tgggtgaaac ctcagccaaa
     7261 aaatcacgca acaaagaact taaaacttta atcggtcgtg ctgaagtggt atatgaggca
     7321 attttaggaa aaaccttaat taatgttcat gaatttctag aacttaaaca aggcgatatc
     7381 ttaagacttg atagagaagc agatgataaa gctatagtaa gcatcgataa aaaagatgtt
     7441 ttcttagcgc aaattggatt gcatcgtttt agaaaatcta ttaaaatttt agaactcata
     7501 cgcacagata aagatgaaat caaagaaatt ttggaaaaat acgaagaaga acgtaaagct
     7561 aaagctagtg tttatgatga gcctgaagag gaggatgaag aaatatgatc aatgattttt
     7621 taaaaatgtt tacaaatgaa tgcatcagca ccattgaagg tttaacagga aaaagtgctg
     7681 aatttagcga atacaaagaa tttgatgtca atgcaagcga tactttaaaa gcacctttag
     7741 tgtatgctat atttgatata gcaaatggtg gaaaaatagg aattttagcc ggtgctgttt
     7801 taatgagtgc tattggtgaa tggatgatgg gtgaagaaga gatcaccaaa aacgataaac
     7861 taggtcctga tgaaatggat gcagctaaag aagccatcca aaatatcatt tcagcatttt
     7921 ctacaacttt aggagctcaa aaagacattc caaaaatgga ttttagtata gaatcttgtg
     7981 aatttgtgcc tgaaagcgta gattttaaag attttaaaaa attattttta tatgatgtaa
     8041 aaataggcga tttagaagaa caagtttctt tagccatgga tcaaacactt cacaacattc
     8101 taagtggaaa acctgctgaa acaggaaata caagcactga ttctaatcac aacgctgaag
     8161 aaaaagcgat aatgcttagc gaagaactta aaaatatcaa tcttatcatg gatgttcgtt
     8221 tgcctgtgcg tgtgcgtata ggcaataaaa aaatgctttt aaaagatgtt ttaactatgg
     8281 atataggttc agttgtggag cttaatcaac ttgcaaacga tccgcttgaa attttaatcg
     8341 gagataaaag aattgcttat ggcgaagtag taattgtcga tggtaatttt ggtgttcaaa
     8401 tcacagaaat cggatctaaa aaagaaagat tagagcaatt aagataaaat tactctataa
     8461 atttaaaaaa attagctata atgatttttt atagttttgc caaaaaaggt atttgatgga
     8521 tacaaaaatc ataaaagatg ttgaaaaatt tgaaaatata cccgatctag aaaaggctat
     8581 tacttttttt ggttcagcaa gacttaaaga agataatttt tattatcagc aggctaaaat
     8641 tttggcacaa aaatgtgctc aaaatggttt ttgtgtgata agtggtggag gtggtggtat
     8701 tatgcgtgca gccaacgaag gtgctttttc acaaaaaaat aatacaaatt caatgagttc
     8761 tgtagggttt aatatatttt tacctcacga gcaaaaactt aatgattttg tagaatataa
     8821 tattactttt gagagcttag ccatacgcaa aatggctctt attgaaaaga gtctagcttt
     8881 tgtgatcttc ccaggcggct ttggaacact tgatgaattg tgtgaaattc ttacattaaa
     8941 acaattagaa tttaaaaaag atgttcctat tattttgttt gggagtgaat tttggcgagg
     9001 ttttgatgag ttcgtcagaa attctttact caaacttgaa gtgatttcta aaggagatga
     9061 gttaaagtat aaaatcactg acgacttgga ttttataatt aatactttaa aggaaattta
     9121 atgaaaattc tagtcgctat gagcggtgga gttgatagta cagtcactgc ttataaactt
     9181 aaaaatttag gtcatgaagt tataggttgt tatatgaaac ttcatggcaa accaaattat
     9241 cacgaagaaa atatcaaaaa agtagaaaaa gttgcaaact ttttgcaaat tccttatcat
     9301 attttagact tacaagaaga ttttaaaaac aaagtttaca tgccttttgt ggatacttat
     9361 aaagagggta aaacaccaaa tccttgcgct ttatgtaacc gttttatcaa acttggaaaa
     9421 cttttagaat ttgctaaaag tttaggttgt gaaaaacttg ccacagggca ttatgcaaga
     9481 cttgaaaaca acttaataaa aaccgcagta gatgaaagca aggatcaaag ctatttttta
     9541 gctagcgcag ataaagaagc tttaaaatat cttatttttc cgctaggcga aatgaaaaaa
     9601 gaagatgtga aaaaatttgc ttccactata gaggttttaa aatcttttgc cacccaaaag
     9661 gaaagttctg aaatttgctt tgttgaagat acttatgtgc aagttttaga tcagtttatg
     9721 gatacaaaaa ttcctggaga agtattagat agtagcggaa aagtggtagg caaacatgag
     9781 ggctatatgc actataccat aggcaaaaga aggggctttg aagtgcgtgg ggcacatgaa
     9841 ccacattttg ttttaaaaat caatcctaag caaaaccaaa tcatcgtagg aaccaaagaa
     9901 gaacttaaaa tcagtgaatt taacctaaaa aatatcaatc tttttataga cgctaaagag
     9961 cttgattgcg aagtgaaaat ccgctatcgt tcaaaatcca caccttgcaa ggtagaaatt
    10021 tatgaagata aaagtgcaaa aatcatccta aaagatcctg tttatggact tgctagcgga
    10081 caaatggcag tcttttatga tcatgataaa gtcatagcaa gcggttttat agaataattt
    10141 ctaggaatta attcctagaa attattaata aaatcctaaa attttccacc aaataagccc
    10201 aacagctatc atcactacta tatcaactat ggaaatcaca aaacctatac tccaccattt
    10261 tttaagagtt acacagcctg ttccaaaaat aacaggagct gttcctattg catagtgagt
    10321 taatgccatc ataacattac ctgaagctat cataataaaa gcataaagaa gtggtggtgc
    10381 tcctaaggca agctgcacta aaaaaacaaa aaacattgct gatatatgag ctgcaatgga
    10441 agcaaagaaa tagtgtgtat ataaaaaaag caaggcttaa aaatatcata atagaaattt
    10501 ccccaagtcc catagcagaa gcaaattcac cttaagcttc agctaaaaac tgtgtaacgc
    10561 caagtttgcc aagtaaagtt gccatcatta caagagctga aaaccatact aaagcaaagc
    10621 cacactagtc gcatcaagag aaattccaaa aaaacaagcc caaagctcca gcccataaaa
    10681 gtaaaagcga gacaaaaaca ctgagcatga ttttttcact atttttcatt tttacaagtt
    10741 cttttaattt atctttagta aaagtagaag cattaggcgt ggatttaatt tctagcggag
    10801 agagaaaata aagcaccaaa ggatttggag ctgtagctgt aataaacata gctgatgaaa
    10861 taggattggc tcttgataat ttaccaaaga aagataagtg cctattttat tttgtgttcc
    10921 atcttcagga gtggatttaa aacttcttgc aataacttga actataggat ttatgatagc
    10981 ccctgctctt gcagtatttg aaggagtaac tggagctaaa atagtttcac aaaaagctat
    11041 agaataagca atacctaagg tttttttacc aagaatactg ataaaatgat aagccaaatg
    11101 ctctccaagt cctgttttaa taactccacg agccacaata atagaataac tataagctaa
    11161 ataagagaat ttgaaaaacc acttaaagcg tcttttatac ccgttttaga ttttaaattt
    11221 gatatagcag tatttacctt ttcatcttat actcttttga tataaaaaat caagtactga
    11281 agtatttaaa ggaaatttta gtctcatcaa taagttgttg cgtagaaatt ttcgaagtag
    11341 ctttggtgta aattttactt agattttcaa ttgggtagtg gtaatgccac taagagctac
    11401 tatggcaata gctatcatac aaacaggccc caaaggcatt acttgtaaaa tcactgccat
    11461 aatcacagca ataaaaagcc caagaaaatg ccaagaatta tcttccaaac ctacaaggag
    11521 taggtatagg ccaaaacaca gctgcaatta aaatacgcag caccaacaag ggaattttct
    11581 ttctatccat tgtttatctt ttgatattgg taatgaaatt ctagttaact aata
//
LOCUS       DAPWGO010000050        11451 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.051, whole genome shotgun sequence.
ACCESSION   DAPWGO010000050 DAPWGO010000000
VERSION     DAPWGO010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11451
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.051"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..540)
                     /locus_tag="RJ336_001170"
     CDS             complement(<1..540)
                     /locus_tag="RJ336_001170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213619.1"
                     /translation="MQTIKSKLQLSLQNWDFNTLENYYELLVKNNKNHMDYIVYLYET
                     GQIKKIKKILNSCQNEPNWWVSDKINISYENLVSIINSKEMVNLSDVSIGCFACLQLN
                     SSIYNGIVDIELLCKNFLYEYSNKMSRLSKKYYISKIIDLALSGEKISKNEIFNNENQ
                     IKDYLFFANLSTVLLNDFNQ"
     gene            complement(540..2021)
                     /locus_tag="RJ336_001171"
     CDS             complement(540..2021)
                     /locus_tag="RJ336_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HDZ5213620.1"
                     /translation="MNIIIPATGIGKRFKEAGYKDLKPFIKVIEDKVILDYVVECFDV
                     RNDVYYFIAQECEKNKFEDFILSRKIHAKVIVYKGGKLGPAGSLYGVASQLQDILDEE
                     VIISYCDFGQEWNYKDFLQFTQENLDVQAIIPCYTGYHPHLLPLENVYAACKMYDNTY
                     KAYKVIEKYNSKNKFEEYYSSGIYYFRTLKLAIEAIKKQIKARDMVFGEYYISMTNNY
                     LENVLCYPFIEKFYQFGTPKDFEYAKKKLNSQDVNNEKIKIQNTIILSAGRGERFLNL
                     NFNQPKPFLPLGKTSIIENIIDTLKDVETKIICVGAQDHKKYWESIKQEVRFVKPNKI
                     GAAYSYKESCGNLSGDVLILPCDLIAKHITKEFIRLQKEYEVIVFVTHASKYNVNNSH
                     YFTWVDGENNKIDNIFVKNRPNDANLVMIGSFYFKANSLLLEYIDKIFQEDIKTNGEF
                     YIDNVFELLIKKHKIGYMIVDNYFSYGTPEEYLENQYWFKVKS"
     gene            complement(2023..2748)
                     /locus_tag="RJ336_001172"
     CDS             complement(2023..2748)
                     /locus_tag="RJ336_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002888005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HDZ5213621.1"
                     /translation="MIYNKEKLDECIKDYQELCKIFGNILDAPSKGGNISIKNDEYFI
                     IKASGEDLKKEHKISVFKNNINSFSYCKGYSEDIAKPSMEIKMHMVFKNKYVAHYHPV
                     YILPYLCAKEYKFVNYKTIDFALPGNDLYEALSKSYSYQEKGIVLLRNHGVIVYAEQI
                     QDIIELYNQLKSDFFEQNDFVYTPDDAVDKINGELWLFRNAMENIALKKQISLIPLKV
                     DEIDKLLNLPDEQYRKKIIESES"
     gene            complement(2735..4036)
                     /locus_tag="RJ336_001173"
     CDS             complement(2735..4036)
                     /locus_tag="RJ336_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HDZ5213622.1"
                     /translation="MFNFKKIAEKYKLIMVDIDNTLFNYTFAHKNALEVVMKLYSFTL
                     EDYDLAKKMIAKRGLSANHHKKELYFKIICENKNIHFSKASEMFELYVSIFTRNLKVD
                     KTMFEFLCFIKSLNKKVIAITNFYFIEQIHKLNCANLTNMIDYLVCSEEFELEKPNKA
                     LVNRALELYGELVDEEEIVMIGDSIADDFLGGGYRINYYPYNCSKLLISISGKSGSGK
                     TTLSNAIDEIYKSFIISTDGYHKYERHSKMWERVTHYNPKANNLIQLAMDIKHIYQDI
                     GNKLYIPIYDHKNGVIVKSDEIEIKDLDIVIIEGLHTLYQEVIGDFVKIKIYIDSDEA
                     DQQKINRDSKERNYSHSKIIDTIQKREEDYKKYLEKQKDNANFLILVRDGIFKIYLKD
                     ILLNNYLQKEYTGRYEDLIQTVKNIFSLILQNRWVKKNDIQ"
     gene            complement(4029..4622)
                     /locus_tag="RJ336_001174"
     CDS             complement(4029..4622)
                     /locus_tag="RJ336_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213623.1"
                     /translation="MIFLHRQNNLDLSIEGYGIEIDLRYNQKLVLNHDLLEKNSLYPF
                     FKEKIQFMKNIPIICNVKESGLEEKIIELLSDDFEYYFLDSQIPDILRLSKNGYQGKF
                     IIRISDVESYNEKLMDISKPKYVWVDYSQFSSFNIKDYQEFIYNIKPKLGQVEPILVS
                     PELYDRSYAELIKPIQSILPKGFSVCTKKPELWSMYV"
     gene            complement(4597..5277)
                     /locus_tag="RJ336_001175"
     CDS             complement(4597..5277)
                     /locus_tag="RJ336_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HDZ5213624.1"
                     /translation="MQAIILCGGLGTRLKSVIKDIPKPMAPINDKPFLEFIFEYLKKQ
                     GIKEVILAVSYKYEVIQEYFKDEFLGIKIKYSIEKEPLGTGGAIKEALKFIKNEAYVL
                     NGDTIFDIDLKKLILNNSKICLALKQMNDFDRYGTVELDSKNYIKLFKEKEFKKQGLI
                     NGGIYFLNKDIFNDFTLQEKFSFEEFLQENYEKLKAKAHIFDNYFIDIGVPGDYGRFM
                     NDIFTSSK"
     gene            complement(5265..5870)
                     /gene="gmhA2"
                     /locus_tag="RJ336_001176"
     CDS             complement(5265..5870)
                     /gene="gmhA2"
                     /locus_tag="RJ336_001176"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDZ5213625.1"
                     /translation="MENLNSYIKEHFQESILVKEQILKDENLITLIKNASLEVIKAYK
                     NGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYEN
                     LFARQVQAQGVKGDVFIGISTSGNSKNILKALELCKQKEIISIGLSGANGGAINELCD
                     YCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFSCKQ"
     gene            complement(5858..6877)
                     /gene="hddA"
                     /locus_tag="RJ336_001177"
     CDS             complement(5858..6877)
                     /gene="hddA"
                     /locus_tag="RJ336_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-D-manno-heptose 7-phosphate kinase"
                     /protein_id="HDZ5213626.1"
                     /translation="MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCT
                     LIEREDGKIIFDSPDTNSYSEYESKEFLENDGKLDIFKSIYNRIVKDFTKKPLSFSLH
                     TYSDVPSGSGLGGSSTLVVGVIKAFSEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQD
                     QYAATFGGFNFMEFYNNKRVIVNPLRIKNWIASELETRIVLYFTNITREAKDIEEHKK
                     GKLGDEKSLEAMHAIKQDAIKMKEALFKADFDTLAKILGKSWQSKKIISEIVSNDELE
                     RIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALSKEQGYVQDFSFTKEGV
                     KSWRI"
     gene            complement(6874..7905)
                     /locus_tag="RJ336_001178"
     CDS             complement(6874..7905)
                     /locus_tag="RJ336_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HDZ5213627.1"
                     /translation="MKKTALITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMDNIY
                     HLSDRINKKDRISIFYADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQ
                     TNIIGTANILENIRILKAKDGYDPVVHVCSSSEVYGRAKVGIKLNEDTTFHGASPYSI
                     SKIGTDYLGRFYGEAYNIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIETGYQEPVI
                     KVGNLSSVRTFQDARDAIRAYYLLSLESQKGKVPCGEAFNIAGEEAFKLPEVIEILLS
                     FSTRKDIKIEQDEERLRPIDADYQMFDNTKIKSFINWKPEIAARKMFEDLLNHWRDEI
                     KKGRIPLNR"
     gene            complement(7902..8951)
                     /locus_tag="RJ336_001179"
     CDS             complement(7902..8951)
                     /locus_tag="RJ336_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HDZ5213628.1"
                     /translation="MKKNDKIYIAGHRGLVGSAILRKLKDNGYENLIYKTHSELDLTD
                     QSAVKFFFEKEKPDFVFLCAAKLGGMDAHRKFRAEFIYDNLQIQNNVIHQSYINNVKK
                     LLFISSTSVYPEHASLPIKEECLLSGKLQYLHEPYAIAKIAGMKMCEAYSDRYGVNFI
                     SVCPTTLYGPNDNFDIESANVVSALMRKIYLAKLLKEKRYDLVLKDLEIDDIDKAKNY
                     LDILGVKENSIEIWGSGNPKREFLYSDDLANACIHIMQNINIEHINKIDRDNPHINIG
                     PEKNYSIKELAYLLKTVIQFEGEFRYNLSKPDGTYEKLTCCDKIKQMNWQAYTKLEDG
                     IRSTFHWYKSNKGLI"
     gene            complement(8963..10573)
                     /locus_tag="RJ336_001180"
     CDS             complement(8963..10573)
                     /locus_tag="RJ336_001180"
                     /inference="COORDINATES: protein motif:HMM:NF016357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HDZ5213629.1"
                     /translation="MINYKKKLHLIIFKKVFSCDFLKRKAIVFTDMFYDENHELIDNF
                     LLFKYMHDLGYDVYYVINKNHIKYKEVKQSYKKNIIGCLPNRTSWRLLSIIAKTKIWV
                     DSCQLLFLSKLYSLVDKSKVCCIQAQHGINYFKEGYRFHLSEFIYDKVIVSNDIEKSI
                     YRKNYSYCEDNFIKAGLPRWTLLENHQEENSILIYFTYRQYISLIKDNFKSSSYYKKI
                     MDFLNSEKLNEICSKYKTRIYFAMHHEIARLFGEDCFETENSYIIFIGEQDIGKIKNK
                     ASMLITDFSSMCFDFMYINKPVIFYNIAKDDILMQKIQEERDIYNRLEEKYKLLNHVY
                     ILEDKVLEQIEYYLDKKFSLRTDEEKKNKEFFYSCNVMEESVKGILEEKRETNIFFNN
                     LHNPLKKNYFYTFFEDKDFKFYGFYADENQKGRWTAAKDSVISFTIPYSDKSIFLNIS
                     CKAFLCKKRPQVKIELFLNDCQLIERKLCLTSNKINQYFTIDKQLYGKTVFLKFKVEN
                     TAQPIFYSKSFDTRPLGVFLEGLCLYEL"
     gene            complement(10570..>11451)
                     /locus_tag="RJ336_001181"
     CDS             complement(10570..>11451)
                     /locus_tag="RJ336_001181"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213630.1"
                     /translation="KNSIDKQKSWLYIHEANLNNLLFSHCNGNFLTMKQYLIEHYPEF
                     NSELIELKNFQEFKIWNEELKIYSLRVIVGLTNIFNFIVNNSLCKNLVLKELKDCKVN
                     IIEAFLPLPKIVNISHSGLDKKNSQFYIGAFGVPHELKFSLEIVQAIEYLNEYKNMSI
                     KLLVVGYGANDFFKKYDFNKSYLEIYENVSDTQFYDLIKEVDLVIQLRKKPHGESSGP
                     IVSALVLDKKIITSKDFLDKKIEDKVFVLDNHELDYKKIAEKILECIQVSSNVVNYSE
                     IKNSYTYSNLVKLLDEL"
BASE COUNT         3913 a         1991 c         1117 g         4430 t
ORIGIN      
        1 ttgattaaaa tcatttagta atacagttga taaatttgca aagaataaat aatcttttat
       61 ttgattttca ttattaaaaa tttcattttt gcttattttt tctcccgata aagccaaatc
      121 tataattttc gaaatataat attttttcga tagtctactc attttattgc tatattcata
      181 aagaaaattt ttacataata attcaatatc tacaatcccg ttatatatag aactatttaa
      241 ttgtaaacat gcaaaacaac caatagaaac atcagacaaa ttaaccatct ctttgctatt
      301 tattatactc acaagatttt cataagagat attaatttta tcactcaccc accaatttgg
      361 ctcattttga caagaattaa gtattttttt tattttttta atttgtccag tttcatacaa
      421 ataaacaata taatccatat gatttttatt attctttact aacagctcat aataattttc
      481 caaagtatta aaatcccaat tctgcaaaga taattgcaac ttagatttaa ttgtctgcat
      541 cacgatttaa ccttaaacca atattgattt tccaaatact cctcgggagt tccataagaa
      601 aaataattat caacaatcat ataacctatc ttatgttttt taattaacaa ctcaaataca
      661 ttatctatat aaaattctcc attagtttta atatcctctt gaaatatttt atctatatat
      721 tctaacaaca aggaatttgc cttaaaataa aaacttccta tcattactaa atttgcatca
      781 ttaggtctat ttttaacaaa aatattatct attttattat tttccccatc tacccaagta
      841 aaataatgcg aattattgac attatattta gaagcatgtg taacaaatac aataacttca
      901 tattcttttt gcaatcttat aaattcctta gtaatatgct tggcaatcaa atcacaaggg
      961 agaattaaaa catcacctga taaatttcca caagattctt tataagaata tgccgcacca
     1021 attttattcg gtttcacaaa ccttacttct tgttttatac tttcccaata ttttttatga
     1081 tcttgtgcac caacgcaaat aattttcgtc tcaacatctt ttaaggtatc aattatattc
     1141 tctataatac ttgttttacc aagaggcaaa aatggttttg gttgattaaa attaagattt
     1201 aaaaacctct ctcctctacc agcagataat ataatagtat tttgtatttt tatcttttcg
     1261 ttattaacat cttgtgaatt taatttcttt tttgcatatt caaaatcttt cggggtgcca
     1321 aattgataaa acttctctat aaaaggataa cataaaacat tttctaaata attattggtc
     1381 atagatatat aatattctcc aaaaaccata tctcttgctt ttatttgttt ttttattgcc
     1441 tcaatagcca actttaaggt tctaaaataa taaataccag aagaataata ttcttcaaat
     1501 ttattcttag aattatattt ttctataact ttatatgctt tataagtatt atcatacatc
     1561 ttacatgctg catacacatt ttctaaaggt aataaatgag gatggtaacc agtataacaa
     1621 ggaattatag cttgaacatc tagattttct tgtgtaaatt gcagaaaatc cttataattc
     1681 cattcttgtc caaaatcaca ataactaata ataacttctt catcaagtat atcttgtaac
     1741 tgtgacgcta cgccatataa acttccagca ggtcctagtt ttcctccttt ataaacaata
     1801 acttttgcat gaattttcct agataaaata aaatcttcaa atttattttt ttcacattct
     1861 tgagcaataa aataataaac atcattgcga acatcaaagc attcaaccac ataatccaaa
     1921 ataactttat cttctataac cttaataaaa ggttttaaat ctttatatcc agcttcctta
     1981 aatctcttac ctattccagt tgcaggtata ataatattca ttctaactct cactttctat
     2041 aatttttttt ctatattgct catcaggtaa atttaataat ttatcaattt catctacttt
     2101 taatgggatt aaactaattt gtttctttaa agcaatattt tccatcgcat ttctaaataa
     2161 ccacaattcc ccattgatct tatcaactgc atcatccgga gtatacacaa aatcattttg
     2221 ttcaaaaaaa tcacttttta attgattata taattctatt atatcttgaa tttgctctgc
     2281 ataaacaatg acaccatgat ttcgcagcaa cactataccc ttttcttgat aagaataact
     2341 tttacttaat gcttcatata aatcatttcc aggtaaagca aaatcaattg ttttgtaatt
     2401 tacaaattta tattccttag cacacaaata aggtaaaata taaacaggat gataatgtgc
     2461 tacatattta tttttaaaca ccatatgcat tttaatctcc atagatggct ttgcaatatc
     2521 ctcagaataa cctttacaat aagaaaaaga attgatatta tttttaaaaa cagagatttt
     2581 atgctctttt tttaaatcct cgcctgaagc cttaattata aaatattcat cattctttat
     2641 agaaatattt ccaccttttg atggtgcatc caagatatta ccaaaaattt tacacaattc
     2701 ttggtaatct ttaatacact catcaagttt ttctttattg tatatcattt ttctttaccc
     2761 atctattttg caaaatcaaa ctgaaaatat tttttacagt ttgaatcaaa tcttcatatc
     2821 taccagtata ttctttttgc aagtaattat ttaacaatat atcctttaaa tatattttaa
     2881 aaataccatc tctaactaaa atcaaaaaat ttgcattatc tttttgtttt tcaagatatt
     2941 ttttataatc ttcctctcgt ttttgtatag tatctataat ctttgaatga ctataatttc
     3001 tttctttact atctctattt atcttctgtt gatccgcttc atctgagtca atatatattt
     3061 taatttttac aaaatctcct ataacttctt gatataaagt atgcaaaccc tctataatta
     3121 caatgtctaa atctttaatc tcaatctcat cagatttaac aatcactcca tttttatgat
     3181 catatattgg tatatacagc ttatttccta tgtcttgata aatatgtttt atatccatag
     3241 ctaactgaat aagattattt gcttttgggt tgtagtgcgt caccctctcc cacatcttag
     3301 agtgtctttc atatttatga tagccatctg tactaataat aaaactttta tatatctcat
     3361 caatagcatt actcaaagta gtctttccac ttccactttt tccagaaatt gagatcaaca
     3421 gctttgaaca attatatgga tagtaattta tcctataccc tcctcctaga aaatcatcag
     3481 cgatagaatc tccaatcatt acaatttctt cttcatcaac aagctctcca taaagctcta
     3541 aagctctatt aacaagtgct ttatttggtt tttcaagctc aaattcttca gagcatacca
     3601 aataatcaat catatttgtc aaatttgcac aatttagctt atggatttgc tcaataaaat
     3661 aaaagtttgt tatagctatt acttttttat taagactttt aataaaacat aaaaattcaa
     3721 acattgtttt atctactttt aaatttcttg taaaaataga aacgtacaac tcaaacattt
     3781 cactagcttt tgaaaaatga atatttttat tttcacaaat aattttaaaa tacaattctt
     3841 ttttatgatg atttgcagat aatcctcttt ttgcaatcat cttttttgct aaatcataat
     3901 cttctagcgt aaaactatat agtttcatta caacttctaa agcattttta tgtgcaaatg
     3961 tataattaaa caaagtatta tcaatatcaa ccataataag tttatatttt tcagctattt
     4021 ttttaaaatt aaacatacat actccataac tcaggctttt tagtacacac agaaaatcct
     4081 tttggcagaa tactttgaat aggttttata agttctgcat atgatcgatc atataactca
     4141 ggagaaacca atataggttc aacttgtcct aactttggtt tgatattata aataaattct
     4201 tgataatctt taatattaaa actagaaaat tgtgaataat ccacccatac atatttaggc
     4261 ttactaatat ccataagttt ttcattataa gattctacat ctgaaattct aatgataaat
     4321 ttaccttgat atccattttt tgataatctc aaaatatctg gaatctgaga gtctaaaaaa
     4381 taatactcaa aatcatcact gagcaattct ataatttttt cttctagtcc cgattctttc
     4441 acgttacaaa ttatagggat atttttcata aattgaattt tttctttaaa aaaaggatat
     4501 agagaatttt tttctaatag atcatggttt aatactaatt tttgattata ccttaaatca
     4561 atttctatac cataaccttc aatagataag tctaaattat tttgacgatg taaaaatatc
     4621 attcataaat ctcccataat ccccaggtac gccaatatct ataaaataat tatcaaaaat
     4681 atgagcttta gcttttagtt tttcataatt ttcttgtaaa aattcttcaa aagaaaattt
     4741 ttcttgtaaa gtaaaatcat taaagatatc tttatttaaa aagtaaattc cgccatttat
     4801 caacccttgc tttttaaatt ctttttcttt aaaaagctta atataatttt tactatcaag
     4861 ctctactgta ccatatctat caaaatcatt catttgtttt aaagcaagac agattttact
     4921 attatttaaa ataagctttt ttaaatcaat atcaaaaatc gtatcaccat ttaaaacata
     4981 agcttcattt tttataaatt tcaaagcctc ttttatggct ccgcctgttc ctagaggttc
     5041 tttttctata ctgtatttta tttttatacc taaaaactca tctttaaaat attcttgtat
     5101 cacctcatac ttgtatgata ctgctaagat aacttctttt atgccttgct ttttaagata
     5161 ctcaaaaata aattctaaaa aaggcttatc atttatcggt gccataggct ttggaatgtc
     5221 ttttataaca cttttaagcc ttgttcctaa gccgccacaa agtattattg cttgcaagaa
     5281 aaacctttgc caaaaagctc ttcttcaacg atagcacaaa taatatgtcc tattaaaata
     5341 tgtgcttctt gaattcttgg tgtgcaagtt gaaggtactt ttatacaata atcacaaagc
     5401 tcatttatag ccccgccatt agctccgctt aagcctatgc ttatgatttc tttttgcttg
     5461 caaagctcta aagcctttaa aatattttta ctatttccac ttgtagaaat tcctataaaa
     5521 acatctcctt taacaccctg tgcttgcact tgtcttgcaa ataaattttc ataaccatag
     5581 tcattgccaa tagctgttaa tatgctagta tctgtagtaa gtgcaatact tgcgataccg
     5641 ggtctatcaa aataaaacct acttacaaat tcccctgcga tatgctgtgc atctgcagca
     5701 ctaccaccat ttcctgcaag taaagttttg ttaccatttt tataagcttt tatgacttct
     5761 aatgaagcat ttttaataag agttatcaaa ttctcatctt ttaaaatttg ctcttttact
     5821 aaaattgatt cttgaaaatg ttcttttata taagaattta aattctccat gatttaaccc
     5881 cctcttttgt aaatgaaaaa tcttgcacat aaccttgctc tttacttaaa gctttgatta
     5941 ggttgtattt tttagtagga tctacaaaga aaaacataaa tccacctgct cctgctccac
     6001 tggttttgcc actataagct ccattatcta tagctagttt ataaattctt tcaagctcat
     6061 cattactaac aatttcagaa atgatttttt ttgactgcca agattttcct aaaattttcg
     6121 ccaaagtatc aaaatccgcc ttaaacaaag cttctttcat ctttattgca tcttgcttta
     6181 tggcgtgcat agcttcgaga gatttttcat ctccaagttt tcctttttta tgttcttcta
     6241 tatcttttgc ttctcttgtg atatttgtaa aataaagcac aattctagtt tcaagctcac
     6301 ttgcaatcca gttttttata cgcaaaggat taacaatgac tcttttattg ttataaaatt
     6361 ccataaaatt aaagccgcca aaagttgcag cgtattgatc ttgtgctccg cctactatgc
     6421 ctaaatcttc tctttctatc tcataagcaa gcttagcgat ttcatattcc cctaaaggta
     6481 aattaagcca ttctgaaaaa gcttttataa cacctacaac taaggttgag cttccgccca
     6541 agccactacc acttggtaca tccgaataag tatgcaaaga aaaactcaaa ggtttttttg
     6601 taaaatcttt tacaatgcga ttgtaaatgc ttttaaaaat atctaatttt ccatcatttt
     6661 ctaagaattc tttgctttcg tactcagagt aagaatttgt atcaggcgaa tcaaaaatga
     6721 tttttccatc ttctctttcg atcaaagtac aatgtatgta taaagatata gtcgcattta
     6781 aaacataacc tgtgtattta tcacaatata aatttatatc agtccctcca cctgctaaac
     6841 caaggcgaag aggagtttgt gtgcgtatgg ttttcatcta tttaacggaa tccttccttt
     6901 ttttatctca tctctccaat gatttaacaa atcttcaaac atttttctag ctgcaatttc
     6961 tggcttccag ttaataaaac ttttgatttt tgtgttatca aacatttgat aatccgcatc
     7021 aataggacgc aatctttctt catcttgctc tatttttata tcctttcttg tagaaaaaga
     7081 taaaagaatt tctataacct ctgggagttt aaaagcctct tctcctgcta tattaaaagc
     7141 ttccccacaa ggaacttttc ctttttggct ttctaatgaa agtagataat aagcccttat
     7201 agcatctctg gcatcttgaa aggttcttac gcttgagaga tttccaacct tgataacagg
     7261 ctcttgataa cccgtttcaa tcaaagcaat ttgctttgca accgtgcttt caaaaaacac
     7321 atcagaacgt cttgggccac tatgtgttcc cattcttgta acaaaagtgc gaatgttata
     7381 agcttcgcca taaaatcttc ctaaataatc ggtgccgatt ttgcttatac tataaggact
     7441 tgcaccgtga aaagttgtat cttcgtttaa cttaatacct acctttgctc taccataaac
     7501 ttcactagaa gaacatacat gcactacagg gtcataacca tctttcgcct ttaaaattct
     7561 aatattttct aggatatttg ccgtacctat tatattagtc tgtaaagttt caatcggtat
     7621 atcaaaagaa gtttttggat aagactgagc tgctaggtga aaaatcacat caggtctttg
     7681 actctcaaaa agtttttgaa gactagagta atcatttaaa tctgcataaa aaatgcttat
     7741 tctatctttt ttattaatcc tatcacttaa atgatagata ttgtccatag gctcttgcca
     7801 acgcatcatt cctataactt cataatccgt atttgcaagc aaaaaatctg ccatttgaga
     7861 accaacttgc cctgtaaatc ctgtaattaa cgctgttttt ttcatatcaa tcctttgtta
     7921 cttttatacc aatgaaatgt tgatcttatc ccatcttcta attttgtata agcttgccaa
     7981 ttcatttgct ttattttatc acaacaagtt aatttttcat atgtgccatc gggcttactt
     8041 aaattatatc taaattcacc ttcaaattga ataactgttt ttaataaata cgctagttct
     8101 ttaatcgaat aatttttttc aggaccaata ttaatatgcg gattatctct atctatttta
     8161 tttatatgtt caatattaat attttgcatt atatgaatac aagcgttagc caaatcatca
     8221 ctatataaaa attctctctt tgggttaccg cttccccaaa tttctatgga attttctttc
     8281 acacctaaaa tatctaaata gtttttggct ttatcaatat catcaatttc taaatctttt
     8341 aaaactagat cataccgctt ctctttcaat aacttggcca aatatatttt tctcattaaa
     8401 gctgaaacaa cattagcact ttcaatatca aaattatcat ttggtccata taaagttgta
     8461 ggacatactg aaataaaatt tacaccatat ctatcagaat atgcttcaca catcttcata
     8521 ccagctattt tagctatagc ataaggttca tgcagatatt gtaatttacc acttaataaa
     8581 cattcttctt ttataggcag tgaagcatgc tctggataga cacttgtact gctgataaat
     8641 aaaagttttt ttacattatt tatatacgat tgatggatta cgttattttg aatttgtaaa
     8701 ttatcataaa taaattcggc tctaaatttt ctatgcgcat ccataccgcc aagtttcgct
     8761 gcacacaaaa aaacaaaatc tggtttttct ttctcaaaaa aaaactttac agcactttga
     8821 tcagttaaat ccaattcaga atgcgtttta taaattaaat tctcatagcc attatctttt
     8881 aattttctca aaatagcaga accaaccaac cccctatggc cagctatata aattttatca
     8941 ttttttttca tatccatcct tattataatt catataaaca taaaccttct aaaaacacgc
     9001 ccaatggtct tgtatcaaaa gacttactat aaaatatagg ttgagccgta ttttctactt
     9061 taaatttaag aaaaactgtt tttccatata gttgcttatc aattgtaaaa tattggttta
     9121 tcttattaga agtcaaacaa agttttcttt ctattaattg acaatcatta agaaataact
     9181 ctattttaac ttgtggtctt tttttgcaca aaaaagcttt acatgatata tttaaaaaaa
     9241 tgcttttatc gctatacgga atcgtaaaag atataactga atctttagcc gcagtccacc
     9301 ttcctttttg attctcatcg gcataaaatc cataaaattt aaaatcttta tcttcaaaaa
     9361 aagtataaaa atagtttttt ttcaaaggat tatgcaaatt attgaaaaaa atatttgttt
     9421 ctcttttttc ttctaatata ccttttacac tttcttccat aacattacaa gaataaaaaa
     9481 attctttatt ttttttctct tcatctgttc ttaatgaaaa ctttttatct aaataatact
     9541 ctatttgctc caaaacttta tcttctaaaa tatagacatg atttaataat ttatattttt
     9601 cctccaaacg attataaata tctctttctt cttgaatttt ttgcattaaa atatcatctt
     9661 ttgctatatt ataaaaaata acaggtttat ttatatacat aaaatcaaaa cacatggatg
     9721 aaaaatctgt aatcagcata gaagctttat tttttatttt tcctatatct tgctcaccta
     9781 taaagattat ataagaattt tcagtttcaa aacaatcttc tccaaacaat cttgcaattt
     9841 catgatgcat ggcaaaataa attcttgtct tatacttgct acaaatttca tttaattttt
     9901 cactatttaa aaaatccata atttttttat aatagctaga agatttaaaa ttatctttta
     9961 ttagactaat atattgtcta tacgtaaagt aaattaaaat tgaattttct tcttgatggt
    10021 tttctaacaa tgtccatctt ggcaacccag ccttaatgaa attatcttca caataagaat
    10081 aatttttgcg ataaattgat ttttctatat cattacttac aatcacttta tcataaataa
    10141 attcagataa atgaaaccta tatccttctt taaaataatt tatcccatgt tgagcctgaa
    10201 tacaacatac tttactctta tctacaagag aatataattt tgataaaaac aacaactgac
    10261 acgaatcaac ccaaattttt gtctttgcta taatacttaa caatctccaa gaagttctat
    10321 ttggcaaaca acctatgata ttttttttat aactctgttt tacctcttta tatttaatat
    10381 gatttttatt gatcacatag taaacatcat aacctaaatc atgcatatat ttaaataaca
    10441 aaaaattatc tattaattca tgattttcat cataaaacat atctgtaaaa acaatagctt
    10501 tcctttttaa aaaatcacaa gaaaatactt ttttaaaaat tattaaatgt agcttttttt
    10561 tgtaattaat cataattcat ccaataactt aacaagatta ctataagtat atgaattctt
    10621 aatctcacta taattaacca cattgctaga aacttgaata cattcaagta tcttttctgc
    10681 tattttttta taatcaagct catggttatc tagcacaaat actttatcct ctattttttt
    10741 atctaaaaaa tctttacttg taattatctt tttatctaaa actagtgcac ttactatcgg
    10801 tccagaactc tccccatgag gtttttttct taattgaatc accaaatcaa cttctttaat
    10861 taaatcataa aattgagtat cactaacatt ttcataaatt tccagataag atttattaaa
    10921 atcatatttt ttaaaaaaat cattagcccc atagccaaca accaacaact ttatactcat
    10981 attcttatat tcattaagat actctatcgc ctgaactatt tctaaagaaa attttaactc
    11041 atgaggaaca ccaaaagctc caatataaaa ttgactattt tttttatcaa gaccagaatg
    11101 actgatattt acaattttag gtaatggtaa aaaagcctcg ataatgttaa ccttacagtc
    11161 ttttaattct tttaaaacca aattcttaca taagctgtta tttactataa aattgaaaat
    11221 atttgttaat ccaacaataa ctcttaaact gtaaattttt aattcttcat tccaaatttt
    11281 aaattcttga aaatttttaa gctcaataag ttctgaatta aattccggat aatgctcaat
    11341 cagatactgt ttcatagtta aaaagttacc attgcaatga gaaaataata aattatttaa
    11401 attagcttca tgaatataaa gccaagattt ttgcttatca atgctatttt t
//
LOCUS       DAPWGO010000051        11267 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.052, whole genome shotgun sequence.
ACCESSION   DAPWGO010000051 DAPWGO010000000
VERSION     DAPWGO010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11267
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.052"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(58..3690)
                     /locus_tag="RJ336_001182"
     CDS             complement(58..3690)
                     /locus_tag="RJ336_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213631.1"
                     /translation="MNIREFLLEKPQENNIISFLQDGASQSENQNTSEYLSNLKNEVI
                     NDFYKNKDKYDKEYEKYNIKDQNLTNPLGYIGEYKRDLYDYNKNPSMNADDLSNYILD
                     KQSKFNASKPIFADDNEVVRKSNQFMRDLGDELQKSGRGRLLQDDDGSYWVQDNNGNY
                     SKVQGSTMGDLYRGLRDNGASMALGTAGAIGGTMLGGGVGMVAGGALGASLGAGYDYY
                     GNTKDTNQDMNLKEALMLMGENAGLSLIGDAAFAGVAKGARALKNTYNMAKTGAQAGK
                     DMIDGMAVKGGNLGNRVIDKITQKDIPMIGKFTDGGLQNAETIFNNLTKNVENKKQID
                     ELIAKENPTYLENGKPTIEILKNIIEQGLNKNNPQFIQDSAKRTSAILKNISNSLQGV
                     PTTQRREVLLKAAQAYPEIGSFLDDVLKADKDASISFLNMIKGQDEVFKNKTGLNGEF
                     DYKAWQKDNHAYENRINQEYGSAISKLDELNNGNIVLTSEDLAKLENFKNNNFLEQDV
                     KNNIQSYLDEIKGKEVSAEQIFGLRTAINKQLNTGNKTYNTKQAYGIVKEILDDALIR
                     NASNKVLAKEILDNANKNFALKENFKESYLGMMKPQETKEGLTDRLVKGLRNINEDKN
                     LENAFKGMNEQERLANETHVMNSLLEKHRIEGVGYDFKSLAKDLEDVNFSSKKIKDAK
                     DVINTYALIYNNNRDLIMTALASSGKKTNSSMATTIQGVFDRILISGIFARLHALAPF
                     VKSAKEQALRNQILDAIKLAKTNKEVISNLKNIKIADQEQSRIFKDALDNYIKVDKEQ
                     NKILKDALIKEGVIKGDNFFMDKADPSKAKSDLNVKISVSPNVRNLAKLTNDEIIADL
                     EYLANKHKEMFKKPSDVFKLIKEIKVNPTFFYKNNRIDIALIAKRLNDNKLGKLGVNK
                     NTGEVRHITKVKEKDLARLEKVSKKNTKENVGIIQTFIQPGSKNENSLNGLPNISNST
                     QTKPKTNLMDDIKKNIKAKEVKKKNKKSVKQSLDEKIQNDKKASEDILKRYDNFLKEN
                     KDYNFDFLDNMNLNTVEYNLTRQMIINAKESTNKGVKKDIPSALRGKIEKELNIQPLK
                     EFGENYAEYYHDGKGALQKLLIEKQGQVAGAFHRKDLGDIDLVWGEVIDKIKHKGYGL
                     AHIIDKHPELDLKLISDIVDKGKLNNQNNIRYRIEYKNYIIGLSSEYKGNKRTFIITA
                     FERYKG"
     gene            complement(3690..4829)
                     /locus_tag="RJ336_001183"
     CDS             complement(3690..4829)
                     /locus_tag="RJ336_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002924539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213632.1"
                     /translation="MAFYNPQRVVFNPDTGVIQNAGKVGGVLYDIMSKSFDDKVKANE
                     FQQEQDLRKQQMEFNQAMQNNQLLQNERNFDYQKERANIADQQWQMNYNQRARQYAMQ
                     NALRQQAINARQQKDEILAGQAILNLPSYTKSNPEMRAIQERFNTIKKGGGDSYYDGQ
                     GLFGGTWQNIKGLFGGDNINDAQDSLFKFISDSIYNEKVRRDTNYNRTRHDEIYKEPS
                     AWKAQTINAKEYEKAIRDYIATSEAKINAYYDEQMAKISNLKNPYINNLYEEQKQKDL
                     KYFREGLAKDLESYYIKDEISNKPSKNAVIIDNSTSNQNIQNDLAKNTLEVQNQNTPK
                     LHSVSFNGINAQISEPDANGNVILVNQAGRKMQVSVEELKKQGLI"
     gene            complement(5094..5474)
                     /locus_tag="RJ336_001184"
     CDS             complement(5094..5474)
                     /locus_tag="RJ336_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213633.1"
                     /translation="MDFITALKGGTGLGSSFADTLMKTSNFTPNLASSSGGFLNGLKN
                     SFSNFGDWLFKSSDANKVTNFDRLGNVLGGAGALYGAYNQQKMAQKNYELQKDAYNFN
                     KYLANEELNRRKNMENKLQNVWSN"
     gene            complement(5485..6132)
                     /locus_tag="RJ336_001185"
     CDS             complement(5485..6132)
                     /locus_tag="RJ336_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213634.1"
                     /translation="MENDALKDLINVITDDDKGQVANNGDEPTQVADNEPMQVANENE
                     PDYKAMFEAYKSENDNKLNVLMGELEALKNPKKEPSEQELQREQYLKELGLDGLDEKL
                     KRLEELDKKQKDKEEQDALIAKYAQVESELRKAYPDADLKAMAELATKLNGLGEGNID
                     SWKTLLNLVGKSNNAKKAEDLSSANNNVRTSDFNDKLKKGEVSEIDLGKELLSLV"
     gene            complement(6122..6325)
                     /locus_tag="RJ336_001186"
     CDS             complement(6122..6325)
                     /locus_tag="RJ336_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213635.1"
                     /translation="MLNIEIKSDISKTKGGKKLIDFIKAKYSECFYIAKNNDEKELRL
                     KALDTMAFLDIIINKIKDEEDGK"
     gene            complement(6318..7856)
                     /locus_tag="RJ336_001187"
     CDS             complement(6318..7856)
                     /locus_tag="RJ336_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213636.1"
                     /translation="MKTKRTNDERVSFLTQLISESKSGYENYKPHFKELQDAYLLENK
                     VMQKLRKRNKSSIYIPKINAKVKYLITSLNDVYFNSERMADIETYINSDDTIIELWQN
                     AIDFYSGKINMFKIFQPLFLDVLLVGTSIAKVTWHKGMPRIERVDIDSIFFDPNALNS
                     EDVGYIVNEIYLTYNQIHERQKLGFYKNIEIQKLFDEDDEYKKVKLYDIYERKNDDEW
                     VVSTLFENNLLRNEVTLQDGQPFVWGSMLPQLKKIDNENYVSAYGEPIMASAMPLQDE
                     INITRNLLIDAVRTHIMPKIMMPKSMGVSREDIETLGKPIYTDDPKGVQILPPPNVNS
                     AGMNLQLLESELTEVTGVSPQNNGAQTANNETATEISIKAQEGGRRSADYIRQYNETF
                     IEPLFDRFAMLVFKYGEDSFFNGFQREDIPSFRFKIQTGTGAMNKEIRRAGIQASMQV
                     FSQLYQMYMSIGDANSAYGIVNASKELTKELLPILGVKNVNSLFAFENNEDINPQMQG
                     EANA"
     gene            complement(7837..8109)
                     /locus_tag="RJ336_001188"
     CDS             complement(7837..8109)
                     /locus_tag="RJ336_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002924542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213637.1"
                     /translation="MAGEFLMIYDAIDVNKIKKLSNLSDEAIKSSLANEFLELVSGFN
                     NISKKKFKREFAEFLFEKGVNEKDILKITNLSKTTIWRIMNENKKN"
     gene            complement(8099..9391)
                     /locus_tag="RJ336_001189"
     CDS             complement(8099..9391)
                     /locus_tag="RJ336_001189"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213638.1"
                     /translation="MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVI
                     ENLLLGQNVLWVDTIQANLQNYYELYFTPELKNLPKDFYSWSVQDKKLIINGAVLHMR
                     SAERSENIEGFGYDLVILNEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKG
                     KNLFYELCRKELSDKNWKHFQFSSYDNPFLKEEQIKELIEEVGGEGSEVVKQEIYGEF
                     IDSSSAELFSLSEIENAMSKNSFSIEKMQGENIWGLDVARYGDDKSALAKRKGFVIYE
                     IKKYSQLGTIELANKILAEYNQSEDKPKGIFIDTCGLGVGVYDVLLNYGLPVFEANSA
                     NSATSNEYLNKRAQMYFTFAKNLKHMELVKDEELKKDMRMIEYEYSDKGLLKIVSKEQ
                     LKKNYGKSPDVSDAVALTFFEKLYSRNNTNEDWSYDGW"
     gene            complement(9388..9774)
                     /locus_tag="RJ336_001190"
     CDS             complement(9388..9774)
                     /locus_tag="RJ336_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213639.1"
                     /translation="MARMMTNGKSMTKEELVSKIESYFNERVVLKETKESIIFAPKTK
                     VGLAVYLGITIQTLGEWEKDKDFGEIVSQAKQKCEMDILNHSLIGTYTPSVSMFLLKN
                     QHGYVDKQEVVSDNVQKIEIIRSEIK"
     gene            complement(9774..10154)
                     /locus_tag="RJ336_001191"
     CDS             complement(9774..10154)
                     /locus_tag="RJ336_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213640.1"
                     /translation="MEKYVLKIDLKSNPVPYKRTTQRSKFACKDYLKYLDFKKLLQME
                     FRRQNNISCFQAFDKQKKYEFSLKIGFNSKRHGDGDNIVKCVLDALFENDKNVLKGDY
                     EIISFKKSFLDLEIKEFNFKEGVA"
     gene            complement(10172..10819)
                     /locus_tag="RJ336_001192"
     CDS             complement(10172..10819)
                     /locus_tag="RJ336_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213641.1"
                     /translation="MQEKIQILMDLLEINKAQATDIVGRYLQDAKDIHAFLDFYFETL
                     ERENIVGTTYEKLRRVCKRAQIEFKKRFEDKEIFLEWLCNKYKNQACFRVFKGDFKYS
                     YFANYGSNQKIKINQESIDSLICINAFKQITYKDGNLIANGEFKEALVDFMFKNQDRI
                     GRDLEHSFPVREIERVLTLDEMRELEKAEEKRLFNENKSRFEKILKSKMAFKNIS"
     gene            complement(10830..>11267)
                     /locus_tag="RJ336_001193"
     CDS             complement(10830..>11267)
                     /locus_tag="RJ336_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213642.1"
                     /translation="LENLKNNQEKKERVSNQNASFVTSFIDFSKKELEKMAKKEFKVP
                     NANELMRQIIAFNEKNGTNFGEELANDFIGYWDAREWKRNGKRMSSVAGSLYTWLKYA
                     KENEARKNQRFNRKKEANPSVVDSLMEYYGMKDENKNKLLGCF"
BASE COUNT         3179 a         2112 c         1249 g         4727 t
ORIGIN      
        1 ttggttagta aattgtccga gctaaccgca aaaaaacaat cggtgaaagt gttgttttta
       61 tcctttgtat ctttcaaaag ctgtaattat aaaagttctt ttatttcctt tatattcact
      121 gcttaaacct ataatataat ttttatattc tattctatat cttatgttgt tttggttatt
      181 taatttcccc ttatcgacaa tatcgctaat taatttcaag tccaactcag gatgcttatc
      241 gataatatga gctaaaccat aacctttatg ttttatctta tctattacct ctccccaaac
      301 caaatcaata tcccctaaat cttttctatg aaaagcacct gctacctgtc cttgtttttc
      361 aatgagtagt ttttgtaaag caccttttcc atcgtgataa tattctgcat aattttcgcc
      421 aaattctttt aaaggttgta tgtttaattc tttttctatt ttacccctta aagcacttgg
      481 aatatctttt tttacacctt tatttgtgct ttctttggca ttgattatca tctgtctagt
      541 taagttgtat tcaacagtat ttaaattcat attatctaaa aaatcaaaat tataatcttt
      601 attctctttt agaaaattat catatctttt tagaatatct tcactagcct ttttatcatt
      661 ttgtattttt tcatcaagac tttgttttac gcttttttta ttctttttct ttacttcttt
      721 tgccttaata ttctttttta tatcatccat taagtttgtt ttaggcttag tttgggtaga
      781 attagagata tttggtagcc cattcaatga attttcattt ttgctacctg gttggatgaa
      841 agtttggata atgccaacat tttctttagt gtttttcttg ctaacttttt caagtctcgc
      901 taaatctttt tctttaactt ttgttatatg tctaacttct ccagtatttt tatttacacc
      961 aagttttcct aatttattat catttaatct ttttgctatt aaagctatat ctattctatt
     1021 atttttataa aaaaatgtag gatttacttt aatttctttt ataagtttaa acacatcact
     1081 aggcttttta aacatctctt tatgtttatt ggctaaatat tctaagtcgg ctataatctc
     1141 atcatttgta agttttgcta aatttctaac atttggagaa acgcttattt ttacatttaa
     1201 atcactcttt gctttgctcg gatcagcttt atccatgaag aagttgtcgc ctttgataac
     1261 accttctttt attagtgcat cttttaatat tttattttgt tctttatcta ctttaatata
     1321 attatccaaa gcatctttaa aaattctact ttgttcttga tctgctattt ttatgttttt
     1381 aagattagat ataacttctt tattggtttt agcaagtttt atagcatcta gtatttgatt
     1441 tcttaatgct tgttctttgg cacttttcac aaaaggagct aaagcgtgta atctagcaaa
     1501 aataccactt attaatattc tatcaaaaac accctgtatt gttgtagcca ttgaagagtt
     1561 tgtctttttt ccactacttg ctaaggctgt cattatcaaa tctctattat tattatatat
     1621 caaagcatat gtattaataa catctttagc atcttttatt tttttacttg aaaaattgac
     1681 gtcttctaaa tcttttgcta aggatttaaa atcatacccc acgccttcaa tcctatgttt
     1741 ttctaataaa gaattcatca catgagtttc attagccaat ctttcttgtt cattcattcc
     1801 tttaaaagca ttttctaaat tcttatcttc atttatattt ctaagccctt taaccaatct
     1861 atcggtcagc ccttcttttg tttcttgagg tttcatcatg cctaaataac tttctttaaa
     1921 attttccttt aaagcaaaat ttttatttgc attatctagt atttcttttg ctaatacctt
     1981 attgctagca tttcttatca acgcatcatc taaaatttct tttactattc cataagcttg
     2041 ttttgtatta tatgttttat ttcctgtgtt taattgctta tttatagctg ttcttaatcc
     2101 aaagatttgc tccgcactta cttcttttcc ttttatttca tctaaatagc tttgtatgtt
     2161 attttttaca tcttgctcta aaaaattatt atttttaaaa ttttcaagct ttgctaaatc
     2221 ttcactagtt aatactatgt ttccattatt aagctcatct aatttactta tagcactgcc
     2281 atactcttgg tttattctat tctcataagc gtgattatct ttttgccaag ccttataatc
     2341 aaactcacca tttaaacctg ttttgttttt aaatacttca tcttgtcctt taatcatatt
     2401 taaaaaagaa atactagcat ccttatcagc ctttaaaaca tcatctaaaa aacttcctat
     2461 ttctggataa gcttgtgctg cttttaataa tacttctctt ctttgtgtag taggaactcc
     2521 ttgtaaacta ttagaaatat tttttaaaat agcacttgtc cttttagcgc tatcttgtat
     2581 aaattgtgga ttatttttat taagtccttg ctctataatg ttttttaata tttctattgt
     2641 aggttttcca ttttctaggt atgttggatt ttcttttgct ataagttcat ctatttgttt
     2701 tttattctct acattttttg taagattatt aaaaattgtt tctgcatttt gcaaaccacc
     2761 atctgtaaat tttcctatca tagggatatc tttttgggtg attttatcta taaccctatt
     2821 acctaaatta ccacctttta ctgccatgcc atctatcata tctttaccgg cttgtgctcc
     2881 tgtttttgcc atattatagg tattttttaa agctcttgct cctttggcaa ctcctgcaaa
     2941 agctgcatct cctattaaag aaagtcctgc attttcgccc ataagcataa gagcttcttt
     3001 taaattcata tcttgatttg tatcttttgt atttccgtag taatcatatc ctgcccctaa
     3061 agatgcacct aatgcaccac ctgcaaccat accaactccg ccacctagca ttgtaccgcc
     3121 aatggcacct gctgttccta aagccatact agcaccatta tctcttaatc cacgatataa
     3181 atcacccatt gtgctacctt gcactttaga ataatttccg ttattatctt gcacccaata
     3241 agatccatca tcatcttgca ataatcttcc acgccctgat ttttgcaact catctcctaa
     3301 atctctcata aactgattac tttttcttac tacttcatta tcatcagcaa aaataggttt
     3361 agaggcatta aatttagatt gcttatctaa aatataatta cttaaatcat cagcattcat
     3421 agaaggattt ttattataat catacaaatc tcttttgtat tcgccaatat atcctagtgg
     3481 atttgttaaa ttttggtctt tgatattata tttttcatat tctttatcat atttatcttt
     3541 atttttataa aaatcattta ttacttcatt ttttaaattt gataaatatt cacttgtatt
     3601 ttgattttca ctttgacttg ctccatcttg caaaaatgaa ataatgttat tttcttgtgg
     3661 tttttctaat aaaaattctc ttatattcat tatattaatc cttgtttttt taattcttct
     3721 acgctaactt gcatttttct acctgcttga ttaactaata ttacattacc attagcatca
     3781 ggctctgata tttgagcatt aattccatta aaactaacgc tatgtaattt tggtgtattt
     3841 tgattttgca cttctaatgt atttttggct aaatcgtttt gtatattttg attacttgtt
     3901 gaattatcta taattactgc atttttacta ggtttatttg agatttcatc tttaatgtaa
     3961 taagactcaa gatcctttgc caatccctct ctaaaatatt ttaaatcttt ttgtttttgc
     4021 tcttcataaa gattattgat gtatggattt tttaaattag aaatctttgc catttgctca
     4081 tcataataag cattaatctt agcttcacta gtggctatat aatcccttat tgctttttca
     4141 tattctttag catttatagt ttgagctttc caagctgaag gctctttgta aatttcatca
     4201 tgccttgttc tattatagtt tgtgtctctt ctaacctttt cattataaat actatcgctt
     4261 ataaatttaa ataagctatc ttgagcatca tttatattat ctccaccaaa aagtcctttt
     4321 atgttttgcc atgttccacc aaaaagacct tgcccatcat aataagaatc accaccacct
     4381 ttttttatgg tattaaatct ttcttgtatt gctctcatct caggatttga ctttgtatag
     4441 cttggtagat taagtattgc ttggcctgct aaaatttcat ctttttgctg tcttgcattt
     4501 attgcttgct gtcttaaagc attttgcatg gcatattgtc tagctctttg gttataattc
     4561 atttgccatt gctgatctgc tatatttgct ctttcctttt gataatcaaa gtttctctca
     4621 ttttgcaaaa gctgattatt ttgcatagcc tgattaaatt ccatttgttg ctttcttaaa
     4681 tcttgctctt gctgaaactc attagcttta actttatcat caaaactttt gctcatgatg
     4741 tcatataaga caccaccgac ttttcctgcg ttttgtataa cgcctgtatc aggattaaat
     4801 actactcttt gtgggttata aaatgccatt ttgtttcctt tattctttct tttaaaataa
     4861 aggatttaag gaagtttgtg tataatttta aaaggtgtgg tgccaagggt cgccaccctt
     4921 agcactaaat taccacctag aaaggcggtg aaataagatg ctacaaatct taatagttat
     4981 tatactactt tgtattattg ttgtcaatgc aaattaacaa tcaataaaca aagcccctta
     5041 tacaaggggt taagatttac cctttaaaac aaactcctta aatccaaatc tatttaattg
     5101 ctccaaacat tttgaagttt attttccata ttctttcttc tatttaattc ttcattagct
     5161 agatatttat tgaagttata agcatctttt tgtagctcat aattcttttg cgccatcttt
     5221 tgctgattat aagcaccata taaagcacca gcaccgccta aaacatttcc taatctatca
     5281 aaattagtta ctttatttgc atcagaactt ttaaataacc aatctccaaa attactaaaa
     5341 gaatttttta atccatttaa aaaaccacca ctgctacttg ctaaatttgg agtaaaattg
     5401 cttgttttca tcaaagtatc tgcaaagcta gaacctagtc ctgtaccacc ttttaaagct
     5461 gttataaaat ccatgatttc tcctttatac caaacttaat aattctttac cgagatctat
     5521 ctcgctaact tcgccttttt ttaacttatc gttaaaatca ctagttctta cattattatt
     5581 tgcacttgat aaatcttcag cttttttagc attatttgat tttccgacca aattaagtaa
     5641 ggttttccag ctgtcaatat tcccttcgcc taaaccattt aattttgttg caagttctgc
     5701 catagccttt aaatccgcat caggataggc ttttcttaac tcgctttcta cttgtgcgta
     5761 tttagcgatt agtgcatctt gctcttcttt gtctttttgc tttttatcaa gctcttcaag
     5821 cctttttaat ttctcatcaa gtccatcaag tcctaattct tttaaatact gctctctttg
     5881 taattcttgt tcgcttggct ctttttttgg attttttaaa gcttcaagct cacccattaa
     5941 aacatttaat ttgttgtcat tttcactttt ataagcttca aacatcgcct tataatcagg
     6001 ctcgttctca ttagcaacct gcataggttc attatctgct acttgcgtag gttcatcgcc
     6061 attattagca acttgtcctt tatcatcatc tgttatgaca tttattaaat cttttaaagc
     6121 atcattttcc atcttcttca tcctttattt tattgattat tatgtctaaa aaagccatag
     6181 tatctaaagc ttttaacctt aactctttct catcattatt ttttgctata taaaaacatt
     6241 cactatattt tgctttgata aaatctatta atttctttcc tcctttagtt ttagatatat
     6301 cacttttaat ttcaatatta agcattagct tctccttgca tttgtggatt aatatcttca
     6361 ttattttcaa aagcaaataa actatttaca ttctttacac ctaaaattgg taataattct
     6421 ttagtaagtt ctttgctagc atttacaatc ccataagcag aatttgcatc gcctatgctc
     6481 atatacattt gatataattg tgaaaaaact tgcatactag cttgaattcc tgcgcgtcta
     6541 atttctttat tcatggcacc tgtgccggtt tgaattttaa atctaaaact aggtatatcc
     6601 tctctttgaa aaccattaaa aaaactatct tctccatact taaaaacaag cattgcaaat
     6661 ctatcaaata aaggctctat aaaagtttcg ttatactgtc ttatgtagtc agcacttctt
     6721 cttccacctt cttgtgcttt tatgctaatt tctgttgcgg tttcattatt tgctgtttga
     6781 gctccattgt tttgtggact aactcctgta acttctgtga gttcgctttc taaaagctgt
     6841 aaattcattc ccgcactatt tacatttggt ggtggtaata tttgtacacc ctttggatcg
     6901 tctgtatata ttggttttcc taaggtttct atatcttctc tgcttactcc cattgatttt
     6961 ggcatcatta ttttaggcat gatatgagtt cttactgcat ctattaaaag atttctagtt
     7021 atattaattt catcttgcaa aggcatagca gaagccatta taggctcgcc ataagcactt
     7081 acatagtttt cgttatctat ctttttaagt tgtggtagca ttgaacccca gacaaaaggc
     7141 tgtccatctt gcaaagtaac ttcatttcta agtaaattat tttcaaataa ggtagaaacc
     7201 acccactcat catcgttttt tctttcataa atatcataaa gctttacttt tttatactca
     7261 tcatcttcgt caaaaagctt ttggatttct atgtttttat aaaatcctag cttttgtctt
     7321 tcatggattt gattataagt taggtaaatt tcattaacta tataacctac atcttcacta
     7381 tttaatgcat ttggatcaaa gaatatacta tcaatatcta ctctttcaat gcgtggcatt
     7441 cctttatgcc aagtaacctt agctatactt gttcccacaa gtaaaacatc taagaaaagc
     7501 ggttgaaaaa tcttaaacat attgatttta ccactataaa aatcaattgc attctgccat
     7561 agctctataa tcgtatcatc gctattaatg taagtttcaa tatctgccat tctttcacta
     7621 ttaaaataca catcatttaa gctagtgatt aaatacttta ccttagcgtt tatttttggt
     7681 atgtaaatgc ttgatttatt tctttttctt agtttttgca ttaccttatt ttcaagcaaa
     7741 taagcatctt gcaactcttt aaagtgtggt ttgtaatttt catatccact tttactttcg
     7801 ctaatgagtt gtgttaaaaa cgacactctc tcatcattag ttctttttgt tttcattcat
     7861 aattctccat attgttgttt tgcttaaatt tgttattttt aaaatatctt tttcattcac
     7921 tcctttttca aataaaaact ccgcaaattc tcttttaaat ttctttttag aaatattatt
     7981 aaaccctgat acaagctcta aaaattcatt tgcaagactt gactttatag cctcatcgct
     8041 taaatttgaa agctttttta ttttgtttac atcaattgca tcatagatca ttaaaaactc
     8101 accagccatc ataactccaa tcttcattag tattgtttct gctgtatagt ttttcaaaaa
     8161 aagttaatgc caccgcatcg ctaacatcag gacttttgcc atagttcttt tttaattgtt
     8221 cttttgaaac tatctttaaa agccccttgt cgctatattc atattcaatc attctcatat
     8281 ctttttttaa ttcttcatct ttaacaagct ccatgtgttt taagttttta gcaaatgtaa
     8341 aatacatttg cgctctttta tttaagtatt cattactggt tgcagaattt gcagaatttg
     8401 cctcaaatac aggcaaacca taatttaaca agacatcata tacgccaacg ccaagaccac
     8461 aagtatctat aaaaatacct tttggtttat cttcgctttg attgtattcg gctagtattt
     8521 tgtttgctaa ttctatagtt ccaagttgtg agtatttttt aatctcataa attacaaaac
     8581 cttttctttt tgctaaagca ctcttatcat ctccatatct tgctacatca agcccccaaa
     8641 tattctcgcc ttgcattttt tcaatactaa aagagttctt gctcatcgca ttttcaattt
     8701 cacttagaga aaataattca gcactcgagc tatctataaa ctcgccataa atttcttgct
     8761 tgacaacttc actaccttct ccgcctactt cttcaattaa ttctttaatt tgctcttctt
     8821 ttaaaaatgg attatcataa cttgagaatt gaaaatgttt ccaattttta tcgctgagtt
     8881 cttttctgca aagttcataa aatagatttt ttcctttagg aactccaccg ataatcgctc
     8941 ttgatttagg attatcaagc aacatagggc gtatggcgtt ataccaaaga tattctcctt
     9001 tgctgccttt taaaataatt cctgcttcgt ttaaaataac aaggtcatat ccaaaacctt
     9061 cgatattttc acttctttca gcacttctca tatgaagcac tgctccatta ataattagtt
     9121 tcttatcttg cacactccat gagtaaaaat cttttggcaa gttttttaac tcaggtgtaa
     9181 aatataactc gtaataattt tgtaaatttg cttgtatggt atccacccat aaaacatttt
     9241 gtcctaaaag caagttttcg ataacaaact tagcacttcc ccttgtaaaa ccaagtcttc
     9301 tgccctttgc tacagttata aagcgtggat ttttatcatc aaaaacttta agttgtgccg
     9361 gagtgtaaga aaaatcgatt tttaatttca tttgatttca cttcttataa tttcaatttt
     9421 ttgaacgtta tcgctaacta cttcttgttt atccacgtag ccatgttgat tttttagcaa
     9481 gaacatacta acgctaggag tataagtgcc gattaaggaa tggtttaaaa tatccatttc
     9541 acatttttgc ttagcttgag atacaatttc tccaaaatcc ttatccttct cccactcgcc
     9601 taaagtttgt attgtaattc ctaaatacac agctaatccc acttttgttt taggtgcaaa
     9661 aataatactc tccttagttt cttttaagac aactctttca ttaaaataac tctctatttt
     9721 tgaaacaagc tcttcttttg tcatactttt gccatttgtc atcattctag ccatcaagcc
     9781 accccttctt taaaattaaa ttctttgatt tctaagtcta aaaaagattt tttaaaacta
     9841 ataatctcat aatcgccttt taaaacattc ttatcgtttt caaataacgc atctaacacg
     9901 cattttacga tattgtcccc atcgccatgc cttttgctgt taaatcctat ttttaaagaa
     9961 aactcatatt tcttttgctt atcaaaggct tgaaaacagc taatattatt ttgtcttcta
    10021 aactccattt gcaagagttt tttaaaatct aaatatttaa gataatcttt acatgcaaat
    10081 ttagatcttt gcgtagttct tttataggga actgggttgc tttttaaatc aatttttaaa
    10141 acatactttt ccatttcaga ctttcttaaa tttagcttat atttttaaaa gccattttgc
    10201 ttttaagaat tttttcaaat ctactcttat tctcgttaaa tagccttttt tcttcagctt
    10261 tttcaagctc tctcatttca tctaaagtta aaactctttc tatttctcgc actggaaaag
    10321 aatgctctaa atctcttcct atcctatctt gatttttgaa catgaaatca actaaagctt
    10381 ctttaaattc tccattagct atcaaattac catctttata agtgatttgc ttaaaagcat
    10441 tgatgcaaat taaagaatca atagattctt gatttatttt aattttttga ttgcttccgt
    10501 aatttgcaaa atatgagtat ttaaaatcgc ctttaaaaac tctaaagcaa gcttgatttt
    10561 tgtatttatt acaaagccat tctaaaaata tttctttgtc ttcaaaacgc tttttaaact
    10621 cgatttgagc ccttttgcaa actcttctta atttctcata ggttgtccct acgatattct
    10681 ctctttctaa agtttcgaaa taaaaatcta agaaagcatg aatatccttt gcatcttgca
    10741 aatatctacc tactatatca gttgcttgag ccttattaat ttccaataag tccattaaaa
    10801 tttgtatttt ttcttgcatt ttttactcct taaaagcatc ctaagagctt gtttttgttc
    10861 tcatctttca ttccgtaata ctccatcaag ctatcaacca cactaggatt ggcttctttt
    10921 tttctgttaa aacgctgatt ttttcttgct tcattttctt tagcgtattt aagccatgta
    10981 taaagacttc ctgccacact tgacattctt tttccatttc ttttccattc cctagcatcc
    11041 caatagccta taaaatcatt agccaactct tcaccaaagt ttgtgccatt tttctcatta
    11101 aaagctatta tttgtctcat gagttcattt gcatttggga ctttaaactc tttttttgcc
    11161 attttctcta actccttttt gctaaaatca ataaagctcg tcacaaaaga ggcgttttga
    11221 ttagaaacgc gttctttctt ttcttgatta ttttttaaat tttctaa
//
LOCUS       DAPWGO010000052        10932 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.053, whole genome shotgun sequence.
ACCESSION   DAPWGO010000052 DAPWGO010000000
VERSION     DAPWGO010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10932
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.053"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            13..708
                     /locus_tag="RJ336_001194"
     CDS             13..708
                     /locus_tag="RJ336_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HDZ5213643.1"
                     /translation="MKTIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVN
                     FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPIL
                     HIAKSSAKALKQENIQKIGLLGTKYTMTQDFYKKILIEENISVITPSDEDIKIVNDII
                     FNELCKGEIKQDSKEKYLNIINKLQEKGAKGVLLACTEIGLLISKNDTNIKIFDTSLI
                     HALDAANEALKDL"
     gene            complement(902..2026)
                     /gene="cydB"
                     /locus_tag="RJ336_001195"
     CDS             complement(902..2026)
                     /gene="cydB"
                     /locus_tag="RJ336_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDZ5213644.1"
                     /translation="MFFGLELEGLQIYWWLILSLLGGLLVFMFFVQGGQTLIDELSKD
                     ELEKTMLVNSLGRKWELGFTTLVLFGGAAFAAFPLFYSASFGGAYWAWLCILFCFILQ
                     AVAYEYRKKENNVYGSKTYEIFLKINGYLGVFLIGVAVSSFFSGSEFILNEHNFVSWQ
                     NPLHGLELLLNPFNYLLGLALVFLARLLGAAYFMNNINDENIKIRVMKKLMINSILFL
                     PFFLGFLAWIFLKDGFSVDTNGVVSMSANLYLYNFLNQMIFAVLLVIGVILVLLGMVQ
                     GTKGCSKAIFTLGLGTVLTVFALLSSIGLGQSAFYPSLSDLQSSLTLKNASSSYYTLS
                     VMAYVSLLVPFVLAYIIYVWNAMDKVKITREEIANDDHAY"
     gene            complement(2026..3588)
                     /locus_tag="RJ336_001196"
     CDS             complement(2026..3588)
                     /locus_tag="RJ336_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDZ5213645.1"
                     /translation="MNELSSVDWSRAQFALTALYHFLFVPLTLGLSFMIAIMETIYVK
                     TKNERWKKITKFWLSLFAINFAIGVATGIIMEFEFGTNWANYSWFVGDIFGAPLAVEG
                     IMAFFLEATFFAVMFFGWDKVSKGFHLLSTWCVAIGSNLSAFWILVANGWMQYPVGMS
                     FNPDTARNEMQSFFEVALSPVAISKFLHTIGSGYVISALFVMGISAWFMLKGRHIIEA
                     KKSLVVGASFGLVCSIFLFFSGDESAYRVTQTQPMKLAAMEGVYQGEHRAGLVPFGIL
                     NPKKTIDNNESVFLFDITIPYALSILGNRDPNSFVPGIEDLIYGNESKGIEPMQNRID
                     RGKIAIQALKDYKLAKENNDTIAMANHKSILETHFKDFGYGYLEKPSDTIPPVALTFY
                     SFHIMVALGSFFFLLFIVTLYLTMANDIEKFRKVLWVCLLSIPLGYIAAEAGWIVAEV
                     GRQPWAIQDLLPVHIAATQLGKVNVQISFWIFAVLFTALLIAEVKIMLTQIKKGFDAH
                     AGHTPLMGKGEK"
     gene            complement(3589..3822)
                     /locus_tag="RJ336_001197"
     CDS             complement(3589..3822)
                     /locus_tag="RJ336_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4492 domain-containing protein"
                     /protein_id="HDZ5213646.1"
                     /translation="MYLKHLYFSISQIFNFYKEGFKNLTLGKTLWKIIFIKLFVMFVI
                     LKLFVFDVNFNSIFKSDKEKSTFVLKNLTLEGK"
     gene            3935..4741
                     /gene="cdtA"
                     /locus_tag="RJ336_001198"
     CDS             3935..4741
                     /gene="cdtA"
                     /locus_tag="RJ336_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cj-CdtA"
                     /protein_id="HDZ5213647.1"
                     /translation="MQKIIVFILCCFMTFFLYACSSKFENVNPLGRSFGEFEDTDPLK
                     LGLEPTFPTNQKIPSLISGADLVPITPITPPLTRTSNSANNNAANGINPRFKDEAFND
                     VLIFENRPAVSDFLTILGPSGAALTVWALAQGNWIWGYTLIDSKGFGDARVWQLLLYP
                     NDFAMIKNAKTNTCLNAYGNGIVHYPCDASNHAQMWKLIPMSNTAVQIKNLGNGKCIQ
                     APITNLYGDFHKVFKIFTVECAKKDNFDQQWFLTTPPFTAKPLYRQGEVR"
     gene            4738..5535
                     /gene="cdtB"
                     /locus_tag="RJ336_001199"
     CDS             4738..5535
                     /gene="cdtB"
                     /locus_tag="RJ336_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin nuclease subunit
                     Cj-CdtB"
                     /protein_id="HDZ5213648.1"
                     /translation="MKKIICLFLSFNLAFANLENFNVGTWNLQGSSAATESKWSVSVR
                     QLVSGANPLDILMIQEAGTLPRTATPTGRHVQQGGTPIDEYEWNLGTLSRPDRVFIYY
                     SRVDVGANRVNLAIVSRTQAEEVIVLPPPTTVSRPIIGIRNGNDAFFNIHALANGGTD
                     VGAIITAVDAHFANMPQVNWMIAGDFNRDPSTITSTVDRELANRIRVVFPTSATQASG
                     GTLDYAITGNSNRQQTYTPPLLAAILMLASLRSHIVSDHFPVNFRKF"
     gene            5546..6115
                     /gene="cdtC"
                     /locus_tag="RJ336_001200"
     CDS             5546..6115
                     /gene="cdtC"
                     /locus_tag="RJ336_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cj-CdtC"
                     /protein_id="HDZ5213649.1"
                     /translation="MKKIITLFFMFITLAFATPTGDLKDFTEMVSIRSLETGIFLSAF
                     RDTSKDPIDQNWNIKEIVLSDELKQKDKLADELPFGYVQFTNPKESDLCLAILEDGTF
                     GAKSCQDDLKDGKLETVFSIMPTTTSAVQIRSLVLESDECIVTFFNPNIPIQKRFGIA
                     PCTLDPNFFAEVNELMIITPPLTAATPLE"
     gene            6287..7969
                     /locus_tag="RJ336_001201"
     CDS             6287..7969
                     /locus_tag="RJ336_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDZ5213650.1"
                     /translation="MEQILTWQQIYDPFSNIWLSALVAFLPILCFLVCLVVLKLKGYQ
                     AGFLTVILATLVALFAYKMPWNLVGASFIQGFTNGMWPIAWIIIAAIFLYKLSIKSGS
                     FEIIKKSVMSITPDHRIQVILIGFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLQAA
                     GLCLIANTAPVAFGAVGIPIIAMANLVGIEQHSVSAMVGRMLVPLSLTIPFFIVFLMD
                     GFKGVKETFPAILVAALSFTTTQFLSSNHLGAELPDIISAVVSLAVTTIFLKFWKPKN
                     IFRFDNESNFTQDNTLSFNQILKAWSPFILLIICIIIWTQPWFKALFDKDGILSYTSI
                     TLQFSNITTGILSPSVTGIGEAKPLSLALGVDLINGKTVAQAGTAILLAAFLTIAILK
                     IKAEDAAECFWATLKEMAIPCITIGLVVAFAFISKNSGMSTTLGLAFAHTGDAFSFFS
                     PIIGWIGVFLTGSDTSANLLFGTLQQVSAQKLGISEALFLAANSVGGVVGKMISPQSI
                     AIACAAVGLVGKESDLFKFTLKYSVAFIVLIGIWTCIIAFFLQGIIPEVIVK"
     gene            8089..8829
                     /locus_tag="RJ336_001202"
     CDS             8089..8829
                     /locus_tag="RJ336_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDZ5213651.1"
                     /translation="MMKKVYFYATCLGTAAMQQSVLNAIKLLRREGIEVIFKKNQTCC
                     AQPSFNSGYFDESREIALYNVDLFDKDYPIVVPSGSCAGMMSHDYKELFKNRPEFSKV
                     KDFSSRVIELSQYLDEVLKVDYEDKGAPIKVTWHSNCHALRVQKSIQASKNLIKKLKN
                     VELVELQYEEECCGFGGTFSVKEPEISNAMVRSKIKDIQNSGAKYLISGDGGCLLNID
                     GTMKRMGLDIKGIHLYDFLLKRLEGERL"
     gene            8826..10265
                     /locus_tag="RJ336_001203"
     CDS             8826..10265
                     /locus_tag="RJ336_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HDZ5213652.1"
                     /translation="MSQKIPHEQIVQIKLNDKQMQENLMTAMHTLQKNRLNVIDARFK
                     DWQGLRAKAKQAKNNALMSLEERLLEFEKNATKNGIKVHWASSDEDACEIVYEIMKEK
                     NITKLLKGKSMASEEIGLNHYLEKKGLKAIETDLGELILQLNEEPPLHIVVPAIHRNR
                     HEIGEIFKEKLGANLENDEPESLNAVAREHLRKDFEGLKLGLSGVNFAMSREGAFWLI
                     ENEGNGRMCTTAPDIHIALCGIEKVMESFEDAATMVSLLTPSATGQFIPTYNNIITGP
                     RKNGDLDGPKEVHVILFDHNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQ
                     TTYPGPIGEVISPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLRCDKIGQ
                     GKNPPLGANKVHHNALEAFAFKQFKNIATNGDKWRFSLSKAHYFNWAVQNFANVLPVI
                     KKWYAFKELPQIKMDLYKEVQKLEGVSYE"
     gene            10258..10914
                     /locus_tag="RJ336_001204"
     CDS             10258..10914
                     /locus_tag="RJ336_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HDZ5213653.1"
                     /translation="MSKIDEISSKSKASILEHLKKAYKETDFTRIESIDPVEHIQTTQ
                     DMLTEMKQKMSDNKYIVENATKDTLEEKINEIVAKYGFKSMIYGADLNLDLEQIKAEK
                     KICFDKEIENLRSEVFHSDFSIIHARAGVSSHGVALIPSSKTQPRMLSLAPKLCVVLL
                     KKENVVKSLSEALNLVKKENEILPTNILFIAGPSRTADIELITVFGVHGPQIAHIIIY
                     "
BASE COUNT         3880 a         1746 c         1792 g         3514 t
ORIGIN      
        1 ttaaggagaa aaatgaaaac cattggtatt ataggcggaa tgagttttga aagcactatt
       61 acttattata aaacaataaa tcaagctata aatgataaat taaaatcttt aaattctgca
      121 aaaattttac tttacagtgt taattttgaa gaaatagaaa atttacaaag ccaagataaa
      181 tggcaagaag ctgcacaaat tttgactcaa tgtgctaaaa aattagaact tgcaggggct
      241 aattttataa taattgcaac taatactatg cataaggttt ttgatgaaat tcaacaaaat
      301 ataaatatcc ctattttgca tattgcaaaa agttctgcta aggctttaaa acaagaaaac
      361 atacaaaaaa ttggtttatt gggtactaaa tacacaatga cgcaggattt ttataaaaaa
      421 atactgattg aagaaaatat tagcgttatt actcctagtg atgaagatat aaaaatcgtt
      481 aatgatatta tttttaatga gctttgcaaa ggtgaaatca agcaagattc taaagaaaaa
      541 tatttaaata ttataaataa actacaagaa aaaggggcaa agggagtact tttagcttgc
      601 actgaaattg gtttattaat atccaaaaat gatacaaata tcaaaatttt tgatacaagc
      661 cttattcacg cccttgatgc tgccaatgaa gctttaaaag atttatgatt aaaagatgct
      721 caaaaatggg caaattgcaa tattttgaaa agatttatac ttatatcggt ttaaatctta
      781 tcttgcttta tagtttgcta tctttttcta attgattgat atttagcatt ataaatttat
      841 agcttagata aattactaaa ggccaagcca ataaaaacaa agcatgtaac attttttctc
      901 cttaatatgc gtgatcatcg tttgcgattt cttcgcgtgt gatttttact ttatccattg
      961 cattccaaac atagataata taagctaaaa caaaaggtac aagtaaagat acataagcca
     1021 tgacgcttag agtataatag cttgaacttg cattttttaa agttaaagaa ctttgtaaat
     1081 cacttaaaga tgggtaaaaa gcactttgac ctaaaccaat gcttgataat aaagcaaaaa
     1141 ctgttaaaac cgttccaagt cctagggtaa aaatagcttt agagcaacct tttgttcctt
     1201 gaaccatacc taaaagcact aaaatcacac caataacaag caaaacagca aaaatcattt
     1261 gatttaagaa attatataaa tataaattcg cactcatgct tacaactcca tttgtatcta
     1321 cactaaaacc atcttttaag aaaatccacg ctaaaaaacc taagaaaaaa ggtaaaaata
     1381 aaatactatt gatcatgagt tttttcataa ctcttatttt gatattctca tcattgatat
     1441 tgttcataaa atacgctgcg cctaaaagcc ttgctaaaaa tactaaagct aagcctaaga
     1501 gataattaaa aggattaagt aaaagttcta agccgtgcaa aggattttgc caagaaacaa
     1561 aattatgctc atttaagata aattcagaac cgctaaaaaa actacttact gcaactccga
     1621 ttaaaaacac acctaaataa ccattaattt taagaaaaat ttcataggtt ttagagccat
     1681 aaacattatt ttcttttttg cgatattcat aagccacagc ctgtaaaata aaacaaaata
     1741 aaatacaaag ccaagcccaa taagctccgc caaaacttgc actataaaaa agtggaaaag
     1801 ctgcaaaagc tgctccgcca aaaagtacga gagttgtaaa accaagctcc catttacgcc
     1861 ctaaagaatt aactagcata gttttttcaa gctcatcctt gctaagctca tcgattaaag
     1921 tctgtccacc ttgaacaaaa aacataaaaa ctaaaagtcc accaagtaaa cttaaaatca
     1981 accaccaata aatttgcaaa ccttcaagtt ctaaaccaaa aaacattatt tttctccttt
     2041 gcccataagt ggagtatgtc ctgcatgtgc gtcaaaacct tttttaatct gagtaagcat
     2101 gattttaact tctgcaatca ataaggctgt aaaaagtact gcaaaaatcc aaaatgaaat
     2161 ttgaacattg acttttccaa gttgtgttgc tgcgatatgt acaggaagca agtcttgaat
     2221 tgcccaaggt tgtctgccta cttcagcaac aatccaacct gcttcagcgg caatataacc
     2281 caatggaatg gataacaaac acacccaaag tacttttcta aatttctcaa tatcatttgc
     2341 catggtaaga taaagcgtaa cgatgaaaag taaaaagaaa aaacttccta aagcaaccat
     2401 gatatgaaag ctataaaaag ttaaagccac aggtggaata gtatcgcttg gtttttctaa
     2461 atatccataa ccaaaatctt taaaatgagt ttctaaaatg gatttgtgat ttgccatagc
     2521 tattgtatca ttgttttctt tagcaagttt atagtctttt agagcttgta tagcgatttt
     2581 tcctctatcg atacgatttt gcataggttc tatacctttg ctttcatttc catagatcaa
     2641 atcttcaatt cctggaacaa aagaatttgg atcacggttt cctaatatag aaagagcgta
     2701 aggtatagta atgtcaaata aaaacacact ttcgttatta tctatggttt ttttaggatt
     2761 taaaattcca aaaggtacaa gtcctgcacg atgttcacct tgataaaccc cttccatagc
     2821 tgcaagtttc ataggttgag tttgagttac acggtaagcg ctttcatctc cgctgaaaaa
     2881 caaaaagatt gaacaaacca aaccaaaact agctcctaca actaagcttt ttttagcctc
     2941 gataatatgg cgtcctttta acataaacca agctgaaatt cccattacaa ataaagctga
     3001 aatcacataa ccactgccta tggtatgtaa aaattttgaa atagctacag gagaaagtgc
     3061 tacttcaaaa aagctttgca tttcatttct tgctgtatca gggttaaagc tcattcctac
     3121 aggatattgc atccaaccat ttgccactaa aatccaaaaa gcagaaagat tgcttcctat
     3181 agccacacac caagttgaaa gtaaatgaaa acccttactt actttatccc agccaaaaaa
     3241 cataactgca aaaaaagtag cctctaagaa aaatgccata ataccttcaa ccgctaaagg
     3301 tgcgccaaaa atatcaccca caaaccagct ataatttgcc cagtttgttc caaattcaaa
     3361 ttccattata atacctgtag ctacaccgat agcaaaattt atggcaaata atgaaagcca
     3421 aaatttggtg atttttttcc atctttcatt tttagttttt acatagatgg tttccatgat
     3481 agcaatcata aaagacaagc ctaaggttaa aggcacaaac aaaaaatgat aaagtgcagt
     3541 taaggcaaac tgcgctcttg accaatcaac gctactaagt tcgttcattt attttccttc
     3601 gagtgtaaga tttttgagta caaaagtgct tttttctttg tcgcttttaa aaatagaatt
     3661 aaaatttaca tcaaaaacaa aaagttttaa aatcacaaac ataacaaaaa gtttgataaa
     3721 gataattttc caaagggtct ttccaagagt taaattttta aaaccttctt tgtaaaaatt
     3781 aaaaatttga gagatgctaa aatataagtg tttaagatac atgtaaattc tacctttaaa
     3841 aacaacaaaa taaaacattt ttaaaaagcg gaaaattata atgaaattta tgttattatt
     3901 ttcttaaaaa tttaaataca tatcaaggtt tttaatgcaa aaaattatag tttttatttt
     3961 atgttgtttt atgacttttt ttctttatgc atgttcttct aaatttgaaa atgtaaatcc
     4021 tttggggcgt tcatttggag aatttgaaga tactgatcct ttaaaactag gacttgaacc
     4081 tacttttcct accaatcaaa aaattccaag tttaattagc ggtgctgatt tagtacctat
     4141 tactcctatt accccacctt taactagaac aagcaatagt gccaacaata atgcagcaaa
     4201 tgggatcaat cctcgcttta aagacgaagc ttttaatgat gttttaattt ttgaaaatcg
     4261 ccctgcggtt tctgattttt taaccatttt aggccctagc ggagcagctt taacggtttg
     4321 ggctttagcg caaggaaatt ggatttgggg ctatacttta atcgatagta aaggatttgg
     4381 cgatgctaga gtttggcaac ttttgcttta tcctaatgat tttgcaatga ttaaaaatgc
     4441 caaaaccaat acttgtctta atgcttatgg taatggaatt gtccattatc cttgcgatgc
     4501 aagcaatcac gcacaaatgt ggaaacttat ccctatgagc aatacagcag ttcaaattaa
     4561 aaatttagga aatggaaaat gcatacaagc acctattaca aatctttatg gtgattttca
     4621 caaggttttt aaaattttta ccgtagagtg tgcaaaaaaa gataattttg atcaacaatg
     4681 gtttttaact actccgcctt ttaccgcaaa acctttatat cgtcaaggag aggtacgatg
     4741 aaaaaaatta tatgtttatt tttatctttt aaccttgctt ttgcaaattt agaaaatttt
     4801 aatgttggca cttggaattt gcaaggctca tccgcagcca cagaaagcaa atggagtgtt
     4861 agcgtaagac aacttgtaag tggagcaaac cccttagata tcttaatgat acaagaagca
     4921 ggaactttac caagaacagc cactccaaca ggacgccatg tgcaacaagg tggaacacct
     4981 attgatgaat atgagtggaa tttaggaact ctttcaaggc ctgatagggt ttttatttat
     5041 tattctcgcg ttgatgtagg agctaatcgt gtaaatttag ctatagtttc aagaacgcaa
     5101 gctgaagaag tgattgtttt acctccacct actacagttt caagacctat tataggaatt
     5161 cgcaatggaa atgatgcttt tttcaatatc catgctttag ccaatggagg aacagatgta
     5221 ggagcaatta tcacagctgt agatgcacat tttgcaaata tgcctcaagt taactggatg
     5281 atagcagggg attttaaccg tgatccttct actataacaa gtacagtgga tagagaatta
     5341 gcaaatagaa ttagagtggt ttttccaact agtgcaactc aagcaagcgg agggactctt
     5401 gattatgcaa ttacaggaaa ttcaaacaga caacaaacct atactccacc gcttttagct
     5461 gcgattttaa tgcttgcaag tttaagatct catatagttt cggatcattt tccagtaaat
     5521 tttagaaaat tttaggacat ttaatatgaa aaaaattatt actttgtttt ttatgtttat
     5581 aactttagcc tttgcaactc ctactggaga tttgaaagat tttaccgaaa tggtttctat
     5641 aagaagctta gaaacgggaa tttttttaag cgcctttagg gatacctcaa aagatcctat
     5701 tgatcaaaat tggaatatta aagaaattgt tttaagcgac gagttaaaac aaaaagataa
     5761 attagctgat gaacttcctt ttggttatgt gcaatttaca aatccaaagg aaagcgatct
     5821 ttgtttggct atcttagaag atggaacctt tggagcaaaa tcttgtcaag atgatctaaa
     5881 agatggtaaa ttagaaactg tattttctat aatgccaaca acaacttcag ctgtgcaaat
     5941 tcgttcttta gttttggaat ctgatgaatg tatagtaact ttttttaatc caaatattcc
     6001 tatacaaaaa cgctttggaa tagccccttg caccctagat cctaattttt ttgctgaagt
     6061 aaatgaacta atgattataa ccccaccttt aacagctgct acccctttag aataagattt
     6121 ttatcttgtt ctatttttat atttatttaa tatttatgat attactaaaa tacacaaaat
     6181 aattaataac aatacaatgt aatttacttt gctctataat ttttttattt taatttaatt
     6241 ttttgttaca ataaatttat acataataat tatcaaggag gaaaaattgg aacaaatttt
     6301 aacatggcaa caaatttatg accctttttc aaacatttgg ctaagtgctt tagtagcatt
     6361 tttacctata ctatgttttt tagtttgttt ggttgtttta aaacttaaag gctatcaagc
     6421 aggtttttta actgttatac ttgctacttt ggtagcttta tttgcctata aaatgccttg
     6481 gaatttggtg ggtgcaagtt ttattcaagg ctttacaaat ggtatgtggc ctatagcttg
     6541 gattatcatc gcggcaatct ttctttacaa actttctatc aagtcaggtt cttttgaaat
     6601 cattaaaaaa agcgtgatga gtattactcc agatcataga attcaagtga ttttaatagg
     6661 tttttgtttt ggttcatttt tagagggtgc tataggtttt ggtggtcctg tggctataac
     6721 tgctgcactt ttagtaggac ttggcttgcg tcctttgcaa gctgcagggc tttgtcttat
     6781 cgcaaatact gctcctgttg cttttggtgc ggtgggaatt cctattattg ctatggcaaa
     6841 tcttgttggc atagaacagc attcagtttc tgccatggta ggtagaatgc tagttccttt
     6901 aagccttact ataccttttt tcatagtttt tttaatggat ggatttaaag gcgttaaaga
     6961 aacttttcca gctattttag ttgcggcgct aagttttaca actactcaat ttttaagctc
     7021 aaatcactta ggagcggaat tgcctgatat tatttcagct gtggtttctt tagcggttac
     7081 aactatattt ttaaaatttt ggaaaccaaa aaatattttt agatttgata atgaaagcaa
     7141 tttcactcaa gataacaccc taagttttaa tcaaatttta aaagcttggt caccttttat
     7201 tttactcatt atttgtatta tcatttggac acaaccttgg tttaaagctc tttttgataa
     7261 agatggtatt ttaagttata caagcattac tttacaattt agtaatatca caactggaat
     7321 tttaagtcct tcagttactg gcataggaga agctaagcct ttatctttgg ccttgggtgt
     7381 agatttaatc aatggaaaaa ccgtagctca agcaggaaca gcaattttac ttgccgcttt
     7441 tctaactata gctattttaa aaatcaaagc cgaagatgct gcagaatgct tttgggctac
     7501 tttaaaagaa atggccatac cttgtatcac tataggttta gttgtggctt ttgctttcat
     7561 ttctaaaaat agcggtatga gcactacctt agggcttgct tttgcacaca caggcgatgc
     7621 tttttctttc ttttcaccaa tcattggttg gataggggta tttttaacag gctctgatac
     7681 aagtgctaat ttactttttg gaaccttgca acaagtaagc gctcaaaaac taggtattag
     7741 tgaagcttta tttttagcag ctaattcagt aggtggagtc gttggaaaga tgatcagtcc
     7801 gcaaagcatt gctatagctt gcgcggcggt tggacttgta ggaaaagaat ctgatctttt
     7861 caaattcaca ttaaaatatt ctgtagcttt tattgtttta ataggaattt ggacttgcat
     7921 tatagctttt ttcttacaag gaatcatccc tgaagttata gtgaaataat taaaaattta
     7981 agttttattt caacaaatat tcgtttttag aatatttgtt ggaaatttta ctttgctttt
     8041 atttttacag gattagaata tttatcctaa attatcccaa aaggagagat gatgaaaaag
     8101 gtgtattttt acgccacatg cttaggaact gctgctatgc aacaaagcgt tttaaatgca
     8161 ataaaacttt taaggcgtga aggtattgaa gtgattttta aaaaaaatca aacctgttgt
     8221 gctcaacctt cttttaactc aggttatttc gatgaaagtc gtgagattgc tttatataat
     8281 gtagatttat ttgataaaga ttatcccatc gttgtgccaa gtggttcttg tgcgggtatg
     8341 atgagtcatg actataaaga actttttaaa aacagacctg aattttctaa agtcaaagat
     8401 tttagctcta gggttataga actttcacaa taccttgatg aagttttaaa agtagattat
     8461 gaagataaag gtgcacctat aaaagtaact tggcattcta attgccatgc tttaagagtg
     8521 caaaaaagca tacaagcaag caagaatctt atcaaaaaac taaaaaatgt agaattagta
     8581 gaacttcaat acgaagaaga atgttgtggt tttggcggaa ctttttcagt aaaagagcct
     8641 gaaatttcaa atgctatggt aagaagtaaa attaaagata tacaaaatag cggtgcaaaa
     8701 tatctcatca gtggcgatgg aggttgtctt ttaaatatag atggtaccat gaaaagaatg
     8761 ggtttagata taaaaggcat acatttatat gactttttac ttaaacgctt agaaggagaa
     8821 agactatgag tcaaaaaatt cctcacgaac aaatcgttca aattaaactc aatgacaagc
     8881 aaatgcaaga aaatttaatg actgccatgc atactttaca aaaaaataga ctcaatgtta
     8941 ttgatgctag atttaaagac tggcagggtt taagagctaa agctaaacaa gctaaaaaca
     9001 atgccttaat gagtttagaa gaaaggcttt tagaatttga aaaaaatgct acaaaaaatg
     9061 gcattaaagt gcattgggca agtagtgatg aagatgcctg tgaaatcgtc tatgaaatca
     9121 tgaaagaaaa aaatattacc aagcttttaa aaggtaaatc tatggcaagc gaagaaatag
     9181 gcctaaatca ctacctagaa aaaaaaggtt taaaagctat agaaaccgat cttggagagc
     9241 ttattttaca gcttaatgaa gagcctcctt tacatatagt tgtacctgct atacatagaa
     9301 accgccatga aatcggagaa attttcaaag aaaaattagg agcaaattta gaaaacgatg
     9361 aacctgaaag tttaaatgcg gtagctagag aacatttaag aaaagatttt gaaggcttaa
     9421 aacttggact tagtggggtc aattttgcca tgtcaagaga aggagctttt tggcttatag
     9481 aaaatgaagg aaacggtaga atgtgcacta cagcacctga tattcatatc gcactttgtg
     9541 gcatagaaaa agtcatggaa agctttgaag atgcggctac tatggtttct ttactcactc
     9601 cttcagccac aggacaattt ataccaactt ataacaatat cattacaggc cctagaaaaa
     9661 atggggattt agatggccct aaagaagtac atgtgatttt atttgatcac aatcgttcta
     9721 aaatgctagc tcatgaggat tattacgaag ctttgcgttg tattcgatgc ggggcttgta
     9781 tgaatttttg ccctgtttat gatcaaatcg gcggacatgc ctatcaaacc acttatccag
     9841 gacctatagg agaagtaatc agtcctaata tttttggcat agatcataca ggagatattt
     9901 tgaatttctg ttcactttgt gggcgttgtt ctgaagtttg tccagtgcaa attcctttgg
     9961 ctgatcttat tcgcaaatta agatgcgata aaataggaca aggtaaaaat ccacctttag
    10021 gagcaaacaa agttcatcac aatgccctag aagcctttgc ttttaaacaa tttaaaaata
    10081 tcgcaaccaa tggcgataaa tggcgttttt cactttcaaa agcacattat ttcaactggg
    10141 cagtgcaaaa tttcgcaaac gttttgcctg tgattaaaaa atggtacgct tttaaagaat
    10201 tacctcaaat taaaatggat ctttataaag aagtgcaaaa actagaagga gtaagctatg
    10261 agtaaaatcg atgaaatttc aagcaaaagt aaagcaagta ttttagaaca tcttaaaaaa
    10321 gcttacaaag aaacagactt tacgcgtatt gaaagtatag atcctgtaga acatatccaa
    10381 accacccaag atatgcttac agaaatgaag caaaaaatga gcgataacaa atacatcgtt
    10441 gaaaatgcta caaaagatac cttagaagaa aaaatcaatg aaattgtcgc aaaatatggc
    10501 tttaaaagta tgatttatgg ggcggattta aatttagatt tagaacagat caaggcagaa
    10561 aagaagattt gctttgataa agaaatcgaa aatctaagat ctgaagtttt tcatagtgat
    10621 ttttccatca ttcacgcaag agcaggggta agctctcatg gagttgcact tataccttca
    10681 agtaaaaccc aacctagaat gctaagcctt gcacctaaac tttgcgtagt attacttaaa
    10741 aaagaaaatg ttgttaaaag tcttagcgaa gctttaaatt tagtaaaaaa agaaaatgaa
    10801 attttaccta ctaatatctt atttatagca gggccttcaa gaacagcaga tatagaactt
    10861 atcactgttt ttggtgttca tgggccacaa attgcacata ttattattta ctgattctat
    10921 actagaatca gt
//
LOCUS       DAPWGO010000053        10910 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.054, whole genome shotgun sequence.
ACCESSION   DAPWGO010000053 DAPWGO010000000
VERSION     DAPWGO010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10910)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10910)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10910
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.054"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            6..1079
                     /locus_tag="RJ336_001205"
     CDS             6..1079
                     /locus_tag="RJ336_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5644 domain-containing protein"
                     /protein_id="HDZ5213654.1"
                     /translation="MKKLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQVQD
                     DDIYFDFDKDEDTYIVVNKQIIPLFTPLEKIAKEFDFSLCIEPLSTKRAIKDLIIDKN
                     DFLDKYKYLEKFGNEEDKKLYAKYDYLYYASEILDYLPEYMGDGVFYLASKMIEKYPE
                     KKIEILKTLADKEKGIFYHLESKNEILETTIKNLQNEILNLGLFDKNILHFDLPKTNA
                     FDNEIKELKEIKHNFKDFNIAFYGFNACDTLKSKLKAKFISYENSIKNNGFSLLNLNP
                     TLSYKIAADIVLDAYDSGADFMVVKEEKDFYLFDTCAKKLMQTSGREFEDFYILSRFE
                     FLALIEGIQAPSLKNHTLKVSLI"
     gene            1076..1459
                     /locus_tag="RJ336_001206"
     CDS             1076..1459
                     /locus_tag="RJ336_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDZ5213655.1"
                     /translation="MKISLECKDLIIEKTLELFLKDHLVMKKNCDFIISDEKIHTAKP
                     LFIISKNSPFLSIPFSKEALFESLNEFDNALKAAALQLALEQKRLLEEKIDAIALEFK
                     KDYENKIDLAIKDLKNKLVKALNDE"
     gene            1452..2135
                     /locus_tag="RJ336_001207"
     CDS             1452..2135
                     /locus_tag="RJ336_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HDZ5213656.1"
                     /translation="MNDEFISVKDFFNHNEKRKKFLQKQEIKPPKEKTKKTKETKLYT
                     NIESGKYKGKKLLLPSLTTTRSTKSIVKSCVFNVIREDLRSKIFIEAFGGSALIAAEA
                     LSNYALKAYAIELDIKAYKIALENAKNIDPNLEVIHANTFEILPKLIENSKNEIILYL
                     DPPFDIREGFSDIYEKIYHFLENLDLKTLNLIIFEHHSTIKTPEKIQNFQKVKEKKFG
                     STSLSFYSS"
     gene            2194..3240
                     /locus_tag="RJ336_001208"
     CDS             2194..3240
                     /locus_tag="RJ336_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HDZ5213657.1"
                     /translation="MRVLTIFLLFMTSIFAVQIKDVANTVGVRDNQLIGYGLVVGLNG
                     SGDGTSSKFTLQSISNLLQGMNIKVDPNDIKSKNTAAVMVTAKLPAFAKSGDKLDITV
                     SSMGDAKSLQGGTLLLTALRGIDGEIYAIAQGSISTGGLTPRPGGAGSHSTAATVMGG
                     ANVEREIPQNFSQNNDLTLSLKVADFKTANDIERVLNTVFGEEVAKAIDSRTVKLKKP
                     EDLSNVDFMARVLEQDIAYKPQSKVIIDERTGTVIAGVDVEVEPVLITHKDITIKIDP
                     NNNAVANQNEIDMKDGGFVDPSSNTLRINNAKSTVANIARMLNKLGATPNDIIAIMEN
                     LKRAGAINADLEII"
     gene            3240..3581
                     /locus_tag="RJ336_001209"
     CDS             3240..3581
                     /locus_tag="RJ336_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213658.1"
                     /translation="MKVDNFLNTYSMNSALLDRAAKARSLESSIKINDNDIVTKSKED
                     EALKEQTDAFEAFFLKQVLDVSLKSQNSLFGKDASDEIYSSMYNDTMSKALSGGMGFS
                     KLLYDFLKERG"
     gene            3644..3841
                     /gene="flgM"
                     /locus_tag="RJ336_001210"
     CDS             3644..3841
                     /gene="flgM"
                     /locus_tag="RJ336_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HDZ5213659.1"
                     /translation="MINPIQQSYVANTALNTNRIDKETKTNDTQKTENDKASKIAEQI
                     KNGTYKIDTKATAAAIADSLI"
     gene            3886..4320
                     /locus_tag="RJ336_001211"
     CDS             3886..4320
                     /locus_tag="RJ336_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlgN"
                     /protein_id="HDZ5213660.1"
                     /translation="MLKQRLDEVNAILAKLIALTEEDIENIKVAKHESVTPSVEEKNK
                     LIAEFITAKKQLDVALVELNNSSTKGLSELLDDEDKQKLDLLKKNLQNLHSKNKEYAK
                     FVLIVKDFLDGLVNKMFNINDGTNNAYGDKKTNPESIFKINV"
     gene            4330..6156
                     /gene="flgK"
                     /locus_tag="RJ336_001212"
     CDS             4330..6156
                     /gene="flgK"
                     /locus_tag="RJ336_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HDZ5213661.1"
                     /translation="MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQT
                     TNGYITTGGVQVGTGTAVESIVRLHDEYSYYKLKGASTQLEYTKYMASTLQEIAQRFP
                     DLQNTGILQDLENYNKAWNDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKK
                     VNDDIKNTVDEINRIGEEIATINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAV
                     ASKNEINQDNRLDTTITDPGHQYNLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYET
                     PDEKVRDLTAKISGGQLGAQLDLRGRNYSKSEGKYEDGIIQGYMDSLDTFAKTMINET
                     NNLYASSAKSSVTSDYLSGLKGDIPLVNYDRTIQPGSFDIVIYDDKGDKKLTKTITID
                     VNTTMNDIMRQINANTDDNNDHNANNDVDDHINASFSYDAKTGDGLFQINAKSGFKVA
                     IEDKGTNFAGAFSIGGFFSGTDASNMKVKDSILNDPSTVRASLSGVDSGNDMANKIIQ
                     LQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYNSVYSEYQS
                     KSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLKS"
     gene            6173..6937
                     /locus_tag="RJ336_001213"
     CDS             6173..6937
                     /locus_tag="RJ336_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HDZ5213662.1"
                     /translation="MKNFIHLKAKLDFLANQKNTNHSLFETPDPLQIAKIHNDEFIAL
                     ICALFAYGNAKNIVNFLKKLDFSLLNLQEKQIKKELKNLKYRFQNEKDIQEIFITLSR
                     LKNESSLYELFYQAYQERENTTDAILAFMQKIKTLNSYSSYGYDFFFGKIWQNTPTSP
                     LKRYNMYLRWMVRKDELDLGLFTKIHTKDLLIPLDTHAHKISLTLGLLKRKIYDYKSV
                     LELTQNLKKLDANDPIKYDFALYRLGQSKEIDKFKE"
     gene            6941..7705
                     /locus_tag="RJ336_001214"
     CDS             6941..7705
                     /locus_tag="RJ336_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDZ5213663.1"
                     /translation="MGFEHLNTIYYFILFFVALFAGFIDSIVGGGGLITLPALIACGI
                     PAHLSLATNKLQSVFGSFTATLTYFKSTTLPHLAWGVFFTTLGAAIGSYSVLFVKDEQ
                     LKLIILIFLTLTFLYTALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGS
                     FWIFACVMLLGFNMRKASINTKILNFTSNIIALAIFLWQYELLWAVGLLMGVGQVLGA
                     YLGSKLVLKTNGKFIKTLFLIVVGATIIKVAWDYFS"
     gene            complement(7698..8879)
                     /locus_tag="RJ336_001215"
     CDS             complement(7698..8879)
                     /locus_tag="RJ336_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDZ5213664.1"
                     /translation="MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEI
                     QKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRELYFMHSCKIMKKILDNLILAQN
                     LNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
                     LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDDYGIFCIFLFV
                     IFIVMLILAYKNFHSFAFSCDFLFLKVPLISRLIIYNQNYYFFMVFSLLLKNGISISK
                     AFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSLVFSMLSVAMKSGRL
                     EVLSEEIAKYYQQKSENLMDRFLIFLEPMMTLFVALLVLFLALGIFLPMWELSSGVNF
                     N"
     gene            complement(8876..10435)
                     /locus_tag="RJ336_001216"
     CDS             complement(8876..10435)
                     /locus_tag="RJ336_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HDZ5213665.1"
                     /translation="MESRMDKIFQAYIDNEISLDEICTKFNITSWDFFKKLANFCNLH
                     FVDLDEDNDFIYEGIPFSLLLKFKFLLIKNNDGFMIIRSKPCSLELLEQVKTFMICEK
                     IDTAIADELKIAKILNQIRIQEEIKRLSIKLRLEWQENHKRDDQSCISQIFDFLLHEI
                     LSFHASDIHIEARNDDALIRFRVDGILREFAIFEKDIYEALVFHVKFLACLNLAESRK
                     TQDGSFELDFENERYDFRVSCLPLIYGESVVIRILKHDKEILDLHKLNLGDKNLEILK
                     KILHRPNGMILLTGPTGSGKSTTLYACLNELKSIEKKIISAEDPIEYKIPLVQQILLN
                     SKVGVEFNSVLRAILRQDPDIIMIGEIRDEESLDIALKASLTGHLLLSTLHTNDALST
                     IDRLLDMQAKSYLIASALSLVIAQRLVRKLCPWCKQKSKKHYIEFEGEFFEPKGCERC
                     HHSGFFGRELIAECLEINEDLACAIRENQDKTILMELAKKYGFQTMFEQGLKKAKEGL
                     TSIDELLRVVR"
     gene            complement(10425..10892)
                     /locus_tag="RJ336_001217"
     CDS             complement(10425..10892)
                     /locus_tag="RJ336_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009882975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HDZ5213666.1"
                     /translation="MQKYNKQKNIYLQAIEHKKHLEQKILQAQILQEKNKISREKLYK
                     ELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKT
                     IFWTLKANELDKQKQDSWLIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK"
BASE COUNT         4147 a         1688 c         1571 g         3504 t
ORIGIN      
        1 aaaccatgaa aaaattagaa ttaagaattt ttagatttga taaaaccaaa gattatgagg
       61 cttattataa accttatatt tatgataatt atgaaaattt tgcaagtttt tatgatctgc
      121 ttttgcaagt tcaagatgat gatatttatt ttgattttga taaagatgaa gatacttaca
      181 tagttgtaaa taagcaaatc ataccacttt ttacaccttt agaaaaaata gcaaaagaat
      241 ttgattttag tctttgtatc gagcctttaa gcacaaaaag agccattaaa gatcttatca
      301 tcgataaaaa tgatttttta gacaaataca aatatcttga aaaatttggt aatgaagagg
      361 ataaaaaact ttatgcaaaa tatgattatt tatattatgc aagtgaaatt ttagactatc
      421 ttcctgaata tatgggcgat ggagtgtttt atttggcttc aaaaatgata gaaaaatatc
      481 ctgaaaaaaa gatagaaatt ttaaaaactc tagcagataa agaaaagggt attttttatc
      541 atcttgaaag caaaaatgaa attttagaaa caacgatcaa aaacctacaa aatgaaattt
      601 taaatttagg gctttttgat aaaaatattt tacactttga tttacctaaa accaatgctt
      661 ttgataatga gatcaaagaa cttaaagaaa ttaaacataa ttttaaagat tttaatatag
      721 ctttttatgg ttttaatgct tgcgatactt taaaatccaa acttaaggct aaatttattt
      781 cctatgaaaa cagtataaaa aataatggct ttagcttgct taatctaaat cctacgctaa
      841 gctataaaat agccgcagat attgttttgg acgcttatga tagcggggct gattttatgg
      901 tagtaaaaga agaaaaagat ttttatcttt ttgatacttg tgctaaaaaa cttatgcaaa
      961 caagtggaag ggaatttgaa gacttttata ttttgagccg ttttgagttt ttagccctta
     1021 tcgaaggcat acaagctcca tcattaaaaa atcacacttt aaaggttagt ttgatatgaa
     1081 aatctcttta gaatgcaaag atctcatcat agaaaaaact ttagaacttt ttttaaaaga
     1141 tcatttggta atgaaaaaaa attgtgattt catcattagc gatgaaaaaa ttcataccgc
     1201 aaaaccctta tttatcatct ctaaaaactc tccattttta agcataccat ttagcaaaga
     1261 agccttgttt gagtctttaa atgaatttga taatgcctta aaagcagcag ctttgcaact
     1321 tgcacttgaa caaaaacgac tgcttgaaga aaaaattgac gctattgctt tggaatttaa
     1381 aaaagattat gaaaataaaa tcgatcttgc cataaaagat cttaaaaaca aactcgtaaa
     1441 agcacttaat gatgaatgat gaatttataa gcgttaaaga cttttttaat cacaatgaaa
     1501 aaagaaaaaa atttcttcaa aaacaagaaa ttaaacctcc taaagaaaaa acaaaaaaaa
     1561 ctaaagaaac aaagctttat acaaatatag aaagtggtaa atacaaaggg aaaaaactac
     1621 ttttacctag tcttacaaca acaagaagta ctaaaagcat agtcaaaagt tgtgttttta
     1681 atgtaataag agaagattta agaagtaaaa ttttcattga agcctttggc ggaagtgctt
     1741 taatagcggc tgaagcacta agtaattatg ctttaaaagc ttatgctata gaacttgata
     1801 taaaagctta taaaattgct ttagaaaatg ctaaaaatat agatccaaat ttagaagtga
     1861 tccatgcaaa tacttttgaa attttaccta aactcataga aaattcaaaa aatgaaatca
     1921 tcttatatct tgacccacct tttgatatca gagaaggttt tagtgatatt tatgaaaaaa
     1981 tttatcattt tttagaaaat ttagatttaa agactttaaa tttaatcatt tttgaacacc
     2041 actcaaccat aaaaactccc gaaaaaatcc aaaattttca aaaagtcaaa gaaaagaaat
     2101 ttggatcaac tagcttaagt ttttactctt cttaactcac ttggaacact ttttgcttga
     2161 tctatcatca acaatagatt aaaggaagaa tccatgagag ttttaacgat atttttactc
     2221 tttatgacaa gcatttttgc agtgcaaatc aaggatgtag caaatactgt aggtgtaaga
     2281 gataaccaac ttataggtta tggacttgtt gtagggctta atggaagcgg cgatggaaca
     2341 agctctaaat ttacactaca atctatctca aaccttttgc aaggtatgaa tatcaaagta
     2401 gatcctaatg atatcaaatc aaaaaatacc gcagctgtta tggttacagc caaacttcca
     2461 gcctttgcaa aaagcggaga taaacttgat attaccgttt catctatggg tgatgcaaaa
     2521 tctttacaag gtggaacact tttactaact gcacttcgtg ggattgatgg tgaaatttat
     2581 gctatagcac aaggctctat ctcaacagga ggtttaacac ctagaccagg aggagcaggt
     2641 tctcactcaa ctgctgcaac tgtaatgggc ggagctaatg tagaaagaga aattccacaa
     2701 aattttagcc aaaacaatga tctaacctta agtttaaaag tagcggattt taaaaccgca
     2761 aacgatatag aaagagtttt aaatactgtc tttggcgaag aagtagctaa agccatcgac
     2821 tctcgcacag taaaactcaa aaaacccgaa gatctttcaa atgttgattt tatggcaaga
     2881 gttttagaac aagatatagc ttataaacca caaagcaaag ttatcatcga tgaaagaaca
     2941 ggaacagtga ttgctggagt tgatgtagag gtagaacctg ttttaatcac tcataaagat
     3001 atcactataa aaatagatcc aaacaataac gcagtagcta atcaaaatga aatcgatatg
     3061 aaagatggtg gttttgtaga tccaagttca aataccttaa gaatcaacaa tgccaaaagc
     3121 acagttgcaa atatagctag aatgcttaac aaacttggag caaccccaaa tgacattatc
     3181 gctattatgg aaaatttaaa gcgcgcaggt gcaattaacg cggatttgga gatcatctaa
     3241 tgaaagtgga taatttttta aatacttata gtatgaatag cgctttactt gatcgtgcag
     3301 ccaaagcaag aagtttagaa tcaagcatca aaataaatga caatgatata gttacaaaga
     3361 gcaaagaaga tgaagcctta aaagaacaaa cggatgcttt tgaggcattt tttttaaagc
     3421 aagttttaga tgtatcttta aaaagtcaaa attcactctt tggaaaagat gccagcgatg
     3481 aaatatactc ttccatgtat aatgatacca tgagtaaagc tttaagtgga ggtatgggtt
     3541 tttcaaaatt attatacgat tttttaaaag aaaggggtta agttttttaa atttaggtcg
     3601 atatggtttg tagaggatta taactaagat caaggaggca gaaatgatca atcctataca
     3661 acaaagttat gtggcaaata ccgcattaaa tacaaataga atagataaag aaactaaaac
     3721 aaacgatact caaaaaacgg aaaatgataa agcgagtaaa atcgcagagc agattaaaaa
     3781 cggtacttat aaaatcgata caaaagctac ggctgctgcg attgctgact ctttaatcta
     3841 aaaactttca ttctcctttt tttgagagag agaaaaggag aaaatatgct taaacaaaga
     3901 cttgatgaag taaatgctat cttagcaaaa cttattgctt taaccgaaga agatatagaa
     3961 aatatcaaag tggctaaaca tgagagtgta acgccaagtg tagaagaaaa aaacaaactt
     4021 atcgcggaat ttattacagc taaaaaacaa cttgatgttg ccttagttga gctaaataat
     4081 agctctacaa aagggcttag tgaactctta gatgatgaag ataaacaaaa actagatcta
     4141 cttaaaaaaa atcttcaaaa ccttcatagt aaaaacaaag agtatgctaa atttgttctt
     4201 attgtcaaag attttcttga tggcttagta aataaaatgt ttaatatcaa tgatggaaca
     4261 aataatgctt atggagataa aaagacaaat ccagagtcaa ttttcaagat caatgtataa
     4321 ggatttataa tgggtatttt tggaacatta tacacaggtg ttacaggctt aaaggcaagc
     4381 gaagttcaaa tcgcaacaac tggaaataat atctcaaatg ctaatgcaac tttttataca
     4441 cgccaaagag tggtgcaaac tacaaatgga tatattacaa caggtggagt tcaagtaggt
     4501 acaggaactg ctgtagaaag tatagtgcgt ttgcatgatg agtattctta ctataaatta
     4561 aaaggtgcat ctactcaact agaatatact aaatatatgg cttccacttt acaagaaatt
     4621 gcgcagcgtt ttcccgactt acaaaatact ggaattttgc aagatttaga aaattataac
     4681 aaagcttgga atgattttgc atctaacccc aacgaaaatg ccacaaaaat agcccttgta
     4741 aaagcttctc agaccttaac agaaagcgtt aataacactt ttgcaacctt agataaaatc
     4801 caaaaaaaag taaatgatga tattaaaaat acagttgatg agattaatag aattggcgaa
     4861 gaaattgcta ctataaataa acaaatttat ggacaagaag ccttaccaac agaacacgca
     4921 aatgaactta gggatagaag agatgaactt gagcttactc tttcaaagct agttagtgca
     4981 gttgcaagca aaaatgaaat caatcaagac aatcgccttg atacaaccat cactgatcca
     5041 ggacatcaat acaatctaag tatagaaggt tttagtatag tagatggaat aaattttcat
     5101 cctttaaagc ttgattatga tgataaaaat aaatcttata gcatttatta tgaaactcct
     5161 gatgaaaaag ttcgcgatct tactgcaaaa attagcggtg gacagcttgg tgctcaactt
     5221 gacttacgcg gtagaaacta tagcaaaagc gaaggaaaat atgaagatgg aattatccaa
     5281 ggttatatgg attctttaga tacttttgct aagaccatga tcaatgaaac taacaatctt
     5341 tatgcaagtt ctgcgaaaag ttctgttact tctgattatc tatctgggct taagggagat
     5401 attcctttag ttaattacga tagaaccata caaccaggaa gttttgatat agtcatttat
     5461 gatgataaag gcgataaaaa actcaccaaa accatcacca tagatgtaaa tacaaccatg
     5521 aatgatatca tgcgtcaaat caatgctaac acagatgata ataacgacca taatgcaaat
     5581 aatgatgttg atgatcatat caatgcaagt tttagctacg atgcaaaaac tggagatggt
     5641 ttatttcaaa tcaatgcaaa atcaggtttt aaggtagcca ttgaagataa gggcacaaat
     5701 ttcgcaggtg cgtttagcat aggtggtttt ttcagcggaa ctgatgcaag taatatgaaa
     5761 gtaaaagatt ccatcttaaa tgatccaagc acagtaagag caagtttaag tggggttgat
     5821 agtggaaatg acatggcaaa taaaatcatc caacttcaat atgaaaaagt taatttttat
     5881 aatgaagatg gcactatcga taatcttacc atggaagaat attaccgcaa acttacaggt
     5941 aaaatagcct cagatggtga aaataacaat gtcgtcaatt caagcaatga aactctttat
     6001 aattctgttt atagcgagta ccaatctaaa agtggcgtaa atacaaatga agaattagcc
     6061 gcccttatac aatatcaatc aagttacggt gcagcagcaa aaatcgtctc taccgtagat
     6121 caaatgcttg ataccttact agggcttaaa tcttaagctc tagtaatatc aaatgaaaaa
     6181 ttttatccat cttaaagcta agcttgattt tttagccaat caaaaaaata ccaatcattc
     6241 cctttttgaa actccagatc ctttgcaaat tgctaaaatt cacaatgatg aatttattgc
     6301 cttaatttgt gctttatttg cctatggaaa tgctaaaaat atagtaaatt ttctaaagaa
     6361 acttgatttt tctttattaa accttcaaga aaaacaaata aaaaaagaac ttaaaaattt
     6421 aaaataccgc ttccaaaatg aaaaagatat acaagaaatt tttatcactc tttcaaggct
     6481 gaaaaatgaa agttcactct acgaactttt ttatcaagcc tatcaagaaa gagaaaatac
     6541 cacagatgcc atcttagctt ttatgcaaaa aatcaaaacc ttaaattcat attcaagtta
     6601 tggatatgat tttttctttg gaaaaatttg gcaaaacacc cctacttcac ctcttaaacg
     6661 ctataatatg tatctaagat ggatggttag aaaagatgaa cttgatcttg gactttttac
     6721 caaaattcac accaaagatc ttttaatccc acttgataca catgcacata aaatttcctt
     6781 gactttagga cttctaaagc gtaaaatata tgattataaa agtgttttag aactcacaca
     6841 aaatttaaaa aaattagatg caaatgatcc cataaaatat gactttgcac tctatcgttt
     6901 agggcaaagt aaggaaattg acaaatttaa ggagtgaaga atgggttttg agcacttaaa
     6961 tacaatttat tatttcatac ttttttttgt agctcttttt gctggtttta tagattctat
     7021 tgtaggtgga ggagggctta ttactctacc agcactcata gcctgtggaa ttcctgcgca
     7081 tttatcctta gcaacaaaca aactccaaag cgtctttggt tcttttacag ctactttaac
     7141 ttattttaaa tccaccactc tacctcatct tgcttggggt gtttttttca caaccttagg
     7201 agcagctata ggaagttata gtgttctttt tgtaaaagat gagcaattaa agcttattat
     7261 cttaatcttt ttaactctta ccttcttata tacagcctta cgtcccaact taggcaaaca
     7321 cgaaagcgaa cctaaaataa aaaatatcaa aatttttcat ttaatttgtg gcttaacttt
     7381 aggattttat gatggatttt tagggcctgg aacgggttca ttttggattt ttgcttgtgt
     7441 gatgctacta ggttttaata tgagaaaagc gagcattaat actaaaattt taaatttcac
     7501 aagcaacatc attgctcttg ctatattttt atggcaatat gaacttttat gggctgtagg
     7561 tttgcttatg ggtgtaggac aagttttagg agcttattta ggctcaaaac ttgtattaaa
     7621 aactaatgga aagtttataa aaactttatt tttaatcgtt gtaggagcta ctattattaa
     7681 agtagcttgg gattatttta gttaaaattg acccctgagc taagctccca cataggtaaa
     7741 aatataccta aagccaaaaa caaaactaaa agcgctacaa ataaagtcat cataggctct
     7801 aaaaaaatca aaaatctatc catcaaattt tcgctttttt gttgataata tttggcaatt
     7861 tcttcactta atacttcaag tctcccactt ttcatcgcaa cactaagcat agaaaacacc
     7921 aaagaatcaa aaatatcaat ctttttaaaa gcctgactta actcaagacc agaatctata
     7981 aaactaaaaa gttttttata ctgaaaaatt aaaaatttat tttcaagccc tataatagct
     8041 aaatcaaaag ctttagatat tgaaattcca ttttttaaaa gcaaagaaaa aaccataaaa
     8101 aaataataat tttgattata aataatcaaa cgagaaatca aaggtacttt taaaaataaa
     8161 aaatcgcaag aaaaagcaaa agaatgaaaa tttttataag ctaaaataag cataacaata
     8221 aaaataacaa acaaaaatat gcaaaaaatt ccatagtcat ctaaaaaatt ataaatttct
     8281 aacattacat gcgtgataaa aggcaaactc gcgcctaaat tttcaaataa atctttaaaa
     8341 ttaggcacta caaaaagcat taaaaacaaa aatgctccga taatacttaa aaaaaccaaa
     8401 gtaggatatc taaaagcctt ttttaattgt ttttgactct ctaagctttt ttctcgaagt
     8461 ttagaaattt gactaaacac ttcactgatt tttcctgtct tttcagccgt tttaatcaaa
     8521 gctaactccg cacgatttaa tccaaaatta gcattttcaa aagcttgatt tagattttga
     8581 gctaaaatta aattgtctaa tatttttttc ataatcttgc aagaatgcat aaaatataat
     8641 tctctaatcg cttcttgaac acttaatcca acttcacaca acaaagctag ctctttaaaa
     8701 aagagtataa aattttcatc ctttaatctc tgaaaattag atttttgaat ttcttttata
     8761 tcaatgattt tccaattctt tgataaggct tttgcttgtg ctgtatttaa attttcagct
     8821 tttatagttt ttgtataatt ttgattgttt ttaagaaatt ctacttcata aaatttcatc
     8881 ttacaaccct taaaagctca tctatacttg taagaccttc tttggctttt tttaaacctt
     8941 gttcaaacat agtttgaaag ccatattttt ttgcaagctc cattaaaatc gttttatctt
     9001 gattttccct aattgcacaa gctaaatctt cattgatctc taagcattca gcgattaatt
     9061 ctctgccaaa aaatccacta tgatgacaac gctcacatcc ttttggttca aaaaattcac
     9121 cttcaaattc aatataatgt tttttgcttt tttgcttaca ccaaggacaa agttttctaa
     9181 ccaaacgctg tgctataaca agactcaaag ccgatgctat caagtaactt tttgcttgca
     9241 tatccaaaag cctatcaatg gtactaagag catcattagt atgcaaggtg cttaaaagca
     9301 aatgacctgt taaagaagct ttaagtgcaa tatctaaact ttcttcatcg cgaatttctc
     9361 ctatcatgat aatatcagga tcttgcctta aaattgctct taaaacacta ttaaactcga
     9421 ctccaacttt tgaattaagc aaaatttgct gcactaaagg aattttatat tctataggat
     9481 cttctgcgga gataatcttt ttttcaatac ttttcaattc atttaaacac gcgtataaag
     9541 ttgtgctttt accactacct gtaggaccgg ttaataaaat cattccattg ggacgatgta
     9601 aaatcttttt taaaatttct aaatttttat ctccaagatt tagtttatgc aaatccaaaa
     9661 tttctttatc atgttttaaa attcttataa caacactttc gccataaatc aaaggcaaac
     9721 atgaaacacg aaaatcatat ctttcatttt caaaatctaa ttcaaaactt ccatcttgcg
     9781 tttttcttga ttcagctaaa ttcaaacaag ctaaaaattt gacatgaaaa accaaagctt
     9841 cataaatatc cttctcaaaa atagcaaatt cacgcaaaat tccatcaacc ctaaacctaa
     9901 tcaaagcatc atcattcctt gcttctatat gaatatcact cgcatgaaaa gataaaattt
     9961 catgtaataa aaaatcaaaa atttgactga tgcaactttg atcatctctt ttgtgatttt
    10021 cttgccattc aagtctaagc ttaatgctta atcttttaat ctcctcttga atgcgaattt
    10081 gatttaaaat tttagctatc tttaattcat cggcaattgc agtgtcgatt ttttcacaaa
    10141 tcataaaagt cttaacttgc tctaaaagct ctaaagaaca aggtttggat ctaataatca
    10201 taaagccgtc attgttttta ataagcagaa atttaaattt taaaagtaaa gaaaaaggta
    10261 taccttcata aataaaatca ttatcttcat ctaaatcaac aaaatgtaaa ttacaaaaat
    10321 ttgctaattt tttaaaaaaa tcccaagaag tgatattaaa tttagtgcaa atttcatcaa
    10381 gacttatttc attatcaata taagcttgaa aaattttatc cattctactt tccatctaat
    10441 tccattaaac cataataatt tatataagca tctaaagcac tttgagcttc tttttcttca
    10501 cctaaagctc ttttagcctg agcaaaaatc agccaagaat cttgtttttg cttgtcaagt
    10561 tcattggctt ttaaagtcca aaatattgtc ttttgataag ctttaatatc aaaatacttc
    10621 ttagctaaat ttaaagcctt ttcatagctt ggattttgat aaaaagattt ttttaaatca
    10681 gaaatattta aaattttaga atcaatttct atcttactaa tgtgtgtatt ttcctgcacc
    10741 gctttaactt cttctagttc tttatataac ttttccctag aaatcttatt tttttcttgt
    10801 aaaatttgcg cttgaagaat cttttgctct aaatgctttt tatgttcaat agcttgcaaa
    10861 taaatatttt tttgcttatt atatttttgc attagcacaa aaaaacaaaa
//
LOCUS       DAPWGO010000054        10862 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.055, whole genome shotgun sequence.
ACCESSION   DAPWGO010000054 DAPWGO010000000
VERSION     DAPWGO010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10862
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.055"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(41..2350)
                     /locus_tag="RJ336_001218"
     CDS             complement(41..2350)
                     /locus_tag="RJ336_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDZ5213667.1"
                     /translation="MQNLYSEDDTRVKFIDAKLYDSSWNEENIKRNYYFTDGRKLLGG
                     KRAQRKFADYLLRYEGNNLAIIEAKKFSKDPLDGLSQGIEYAKILNVPFVYSSNGEKI
                     YEYDIRSHSGKYIDKFPSPKELFDRIYGNVKEWQYRLLTQNVMYIPQKELRYYQKIAI
                     DKVIEAIINNKNRILLTLATGTGKTTIAFNLCYRLLEARWNKENKDQKPKILFLCDRV
                     SLRDQALGEFNPIESDCKAISAEEIKKNDGKIITNANVFFGIYQSLAANSKEQENTQE
                     EQESKFYLQYPKDFFDLIIIDECHRGGANEEGSWRAVLEYFSYATQLGLTATPKKEEN
                     IDTYEYFGESVYDYSLKSGIEDGFLTPYKVKLIKTTLSDGYTYNPDDLIQGELEKGFY
                     KQSEFERNIFLPNYNDFIAKKILELINPMDKTIIFCANQAHANEVKRAIDKYKSVKRD
                     DYCVRVTSDEGKIGLDYLKQFQDNDKSFPVILTSSKMLTTGVDAKNVRNIVLLANIGS
                     MVEFKQIIGRGTRVYEGKDFFTILDFVGATKLFYDPKWDGEKIKELKEQNKQEKITKE
                     QIKQTKEESKEKKSVTIHLKGTKLKVLDITTSYVGAQGKPLSTKEFLEFLIGKLGEYY
                     DDEAKLREIWSDQKNRERFLKALANDGVDEDALKDLRKIFQKDCDIYDVLAHLSFNAE
                     IKTRQERVLQVENGEFLKRFQKEKAIKFIEFLLNRYQEYGIKDFDDGLKPLIELSSLG
                     NVRELADEFGGLEILKQSFDDLQREIYAR"
     gene            2481..3557
                     /locus_tag="RJ336_001219"
     CDS             2481..3557
                     /locus_tag="RJ336_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HDZ5213668.1"
                     /translation="MQYKILENNRIASKGYAMLSKDAKFTPFEFSRHAIGDNDILIKI
                     LYAGICHSDIHTARSEWGEATYPCVPGHEIAGEVIAVGKNVSKFKVGDYAGVGCMVNS
                     CGECDACKRSQEQFCENGKTIFTYNSCDVFHGNENTYGGYSNNIVVSEKFAICVPKNA
                     PMHKVAPLLCAGITTYSPLKFSKIKEGSSVAIAGFGGLGMMAVKYAVKMGAKVSVFAR
                     NENKKADALAMGVSSFYTSTDKNAVKERFDLIISTIPTPYNPAIYLDLLKFGGEMAIV
                     GLPPVEDKVNIGINELVHKAGKKVYGSLIGGIAETQEMLDFSLKHEIYPETELITPQE
                     IDKAYENLTSGKAKFRYVIDMTKE"
     gene            complement(3559..4008)
                     /locus_tag="RJ336_001220"
     CDS             complement(3559..4008)
                     /locus_tag="RJ336_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HDZ5213669.1"
                     /translation="MLELIGELSLQNYMGEWLEMARKPAFFQKSCLNSKAKYELKYKN
                     GVPYVEIENFCSKENEISSIKGKAKIVSNRQLAVRFNIFMNLFNKVNYEIIFIDSEYK
                     VAIVGSPDKKYLWILARNIIDEKSIKELLDIAKQRGFSVSDVIFDKY"
     gene            complement(4001..4342)
                     /locus_tag="RJ336_001221"
     CDS             complement(4001..4342)
                     /locus_tag="RJ336_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002921808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDZ5213670.1"
                     /translation="MTKENSQCNFEECGFNYTLALINGKYKMSILYCLFRYEIVRYNE
                     LKRFLSSISFKTLTNTLRELENDGLIIRKEYAQIPPKVEYSLSKRGQSLIPILQAMCK
                     WGEKDKKEKNA"
     gene            4442..5020
                     /locus_tag="RJ336_001222"
     CDS             4442..5020
                     /locus_tag="RJ336_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDZ5213671.1"
                     /translation="MKNILLLNGAKEFGNSKGQLNLTLHNHALEILKTLGYEVDQTHI
                     DQRYDPKEEIQKFIKADAVIYQMPAWWMGEPWIVKKYIDEVFGLGAGVLFKNDGRTHE
                     NPSKNYGKGGLDHGKKYMFSLTWNAPLEAFNDKNEFFEGKGVDMVYWHLHKAHEFIGM
                     KALPTFMCNDVVKNPQVEKYLNEYELHLKKIF"
     gene            5053..5949
                     /locus_tag="RJ336_001223"
     CDS             5053..5949
                     /locus_tag="RJ336_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDZ5213672.1"
                     /translation="MTRTKYLYILLVLAMFLWGSSWPTSKILSAYADTSVITFWRFFF
                     VLLGSLMVLGFLRIPLSLEKSILKWVLIAGILNGLYTFVFFIAIKHGLAGKGGVLVTT
                     MIPIFSYLIFMIAILFQKDKKSTHKIIKSEILGLFLGLLSGFCLLNLGSLEDLFGKFN
                     ILFLTCSFIWALIAVFNHKAKGVHPLAINFYINLISVLMFSWVLFDVKSYEIFHFEFK
                     FWISMFVVAFLSTIIGTSIYYYGIHILGSVKANSFVLITPASALICSYFILDEVPNAL
                     TLLGCALAIGAIYFINIYGKKA"
     gene            complement(5946..6911)
                     /locus_tag="RJ336_001224"
     CDS             complement(5946..6911)
                     /locus_tag="RJ336_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDZ5213673.1"
                     /translation="MSIKIIEASINSSLQDFGRKKFAKFGIARSGAMDEDALRMANIL
                     LGNKQDEAGVELCLKGGKYKFLDENYFVLSGAKFEAKLNNQKIKTYKVYKANKGDILE
                     LGLAKIGFRGYLCVAGGFEIKSFLNSKSSDAKMGVGFFEGRALQKDDILNTHNTFIPF
                     NLEARECENPLFKSHKEPIIRVILGTNEDAFTQKGIDTFLNTSYKVGSKSDRMAIYAE
                     SSESIEHKNSADIISDPAVFGSIQVPKSGIPIILMAGRQSTGGYTKIGTVIENDLSLL
                     AQAKLGSSFKFQSISMQEALELYKQREMKFKAMDQKINLDFENLI"
     gene            complement(6892..7632)
                     /gene="pxpB"
                     /locus_tag="RJ336_001225"
     CDS             complement(6892..7632)
                     /gene="pxpB"
                     /locus_tag="RJ336_001225"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HDZ5213674.1"
                     /translation="MFSVHFSGSKALLLRFEQEISPQINAYVLSTEQRIQKALKEGEI
                     YGIDELVSAYASLLIYFNPCILSLNSLLDFLEKIKKDIKLAEQNSSLCIEVPLCYDEE
                     FGLDLEFVCKHNQISKEELISLHTKPYYLVFMLGFMAGFPYLGGLDERLFTPRLSSPR
                     AKIEAGSVGIADKQTGVYPISSPGGWQIIARTPLEFFDKEDEKNPTLLKAGMFLKFKA
                     ISKDEFFDIQEQVAKKVYQKEIYEYKNH"
     gene            complement(7642..8409)
                     /locus_tag="RJ336_001226"
     CDS             complement(7642..8409)
                     /locus_tag="RJ336_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamB/YcsF family protein"
                     /protein_id="HDZ5213675.1"
                     /translation="MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPC
                     VMDKTLNLAKQNGVCIGAHPSYPDLLGFGRRNMQISFEEAKNYALYQLGALFGFAKAK
                     GMKIQHFKAHGALYNMAAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLR
                     YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKA
                     DSICVHGDNAKALEFVKKIKENLEKEQIQICALENFI"
     gene            complement(8551..9360)
                     /locus_tag="RJ336_001227"
     CDS             complement(8551..9360)
                     /locus_tag="RJ336_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDZ5213676.1"
                     /translation="MKKIISLALALALSASAAELKMATTTSTDNTGLLDALKPLYEKE
                     SGNTLKWVAVGTGAALKMGEDCNADVLFVHSPKAEKEFMKKGFGVDRTPVMYNDFIII
                     ADKSLASKFKGKNLKESLELIKNEKLTFISRGDKSGTDNKEKSLWKNLGGVPEKQSWY
                     QQSGQGMLASIKIAEEKKGVILTDRGTYIKYEANEKGKPNLVIVNEGDDSLKNFYSVI
                     ATNPKHCKNVNYTEASKFIKWVTSDKTLNFIADFKLLNKPLFVIDAKTRKD"
     gene            9439..10125
                     /locus_tag="RJ336_001228"
     CDS             9439..10125
                     /locus_tag="RJ336_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ5213677.1"
                     /translation="MDYIFDGFKQALFLLFNADESVISAIKTTLLSSSISIVLALLIG
                     FPLGFILGFFDFKFKRFIKLIIDTSLSFPTVAVGLILYALISSRGPLGEFGLLFTIKA
                     LILGQFVLALPIVIALFSNLIENMNKKHFLLIKSFHLSPLKLVLMMIYELRFALISVV
                     ALAYGRIVAEVGVAMIVGGNIKYDTRTITTAISLETNKGEFASGIALALVLILIAFCL
                     NFITHKLKRT"
     gene            10127..>10862
                     /locus_tag="RJ336_001229"
     CDS             10127..>10862
                     /locus_tag="RJ336_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213678.1"
                     /translation="MIEISNLFFNYQNKEVLKIKNLKLDTSKISILMGVNGSGKSTFL
                     RILKFLEGDFSKNISYFGNFKLNNKQKREIYLLFPEPILLNRSVRANFLFTLKTYGIK
                     EDIEERIKESLMFLNLDESLLSKYPNELSSGQSQKIAFAIALSVRAKYYLLDEPSAFL
                     DKNTTLLFKKAILKMHENFNTGFLIASHDKHFLDSLAQKKLYLHSGEILEFENTNVFE
                     LENQGVKFCNFIDFSNCKKYKDFKKPP"
BASE COUNT         3429 a         1789 c         1578 g         4066 t
ORIGIN      
        1 attattttaa ctaaaaatct caaatttatc tttaaacata tcacctcgca taaatctccc
       61 tttgtaaatc atcaaaactt tgttttagaa tttctaagcc accaaattca tcggccaatt
      121 ctcttacatt gcctaaagaa ctaagctcta taagcggttt taagccatca tcaaaatctt
      181 ttatgccgta ttcttgatat ctatttagta aaaattctat aaattttata gccttttctt
      241 tttgaaagcg ttttaaaaac tcaccatttt ctacttgtaa aacacgctct tgccttgttt
      301 ttatctcggc attaaagctt aaatgcgcta aaacatcgta tatatcacaa tctttttgaa
      361 aaatttttct tagatctttt aaagcatctt catctactcc atcatttgca agggctttta
      421 aaaatctttc tctatttttt tgatcactcc aaatttcacg caattttgct tcatcatcat
      481 aatactcacc aagctttcct atcaaaaatt ctaaaaattc tttagtgcta agtggcttac
      541 cttgtgctcc tacatagctt gtagttatat ctaaaacctt aagctttgtg ccttttaagt
      601 gtatagtgac gctctttttt tctttgcttt cttcttttgt ttgttttatt tgctctttag
      661 taattttttc ttgtttgttt tgctctttta gttcttttat tttttcacca tcccattttg
      721 gatcataaaa aagcttagta gcgccaacaa aatcaagtat ggtaaaaaag tctttacctt
      781 catatactct agttccacgt ccgatgattt gcttaaattc caccatagag cctatatttg
      841 ctagtaaaac gatattgcgg acattcttag catccacgcc cgttgtaagc attttagaac
      901 ttgtaagtat gacaggaaag cttttatcat tgtcttgaaa ctgctttaga taatcaagcc
      961 ctattttacc ttcatcactc gtaactctta cacaataatc atctctttta acacttttat
     1021 atttatctat ggctcttttt acctcgtttg catgagcttg atttgcacaa aaaattatag
     1081 ttttatccat gggatttata agctctaaaa ttttcttagc gataaagtca ttatagtttg
     1141 gtaaaaagat atttctttca aactcacttt gtttataaaa gcctttttca agctcacctt
     1201 gtatcaaatc atcaggatta taggtataac catcactcaa agttgttttt atgagtttga
     1261 ctttataagg ggttaaaaat ccatcttcaa taccactttt aagactataa tcataaacac
     1321 tctcaccaaa atactcataa gtgtctatat tttcttcttt ttttggagta gcggttaaac
     1381 caagctgagt tgcataggaa aaatactcaa gcacagctct ccagcttcct tcttcgtttg
     1441 ctccacctct gtggcactca tctatgatga taagatcaaa aaaatctttt gggtattgaa
     1501 gataaaattt gctctcttgt tcttcttggg tgttttcttg ttcttttgaa tttgcggcta
     1561 agctttgata aattccaaag aaaacatttg catttgttat gatttttcca tcatttttct
     1621 ttatttcttc agcactaatt gccttacaat cactttctat aggattaaat tctcctaagg
     1681 cttgatctct taagctcact ctatcacata aaaatagtat tttaggcttt tgatctttgt
     1741 tttctttatt ccatcttgcc tctaacaaac gataacacaa attaaaagct atggttgttt
     1801 ttcctgtgcc tgtagcaaga gtgagtaaaa ttctattttt gttatttata atagcttcta
     1861 tgactttgtc tatggctatt ttttgataat accttaattc tttttgcgga atatacataa
     1921 cattttgggt taaaagcctg tattgccatt ctttgacatt gccataaatc ctatcaaaaa
     1981 gctctttagg acttgggaat ttatctatat atttaccact atgacttctt atatcgtatt
     2041 cataaatttt ttctccattg ctactatata caaaaggcac atttaaaatt tttgcatatt
     2101 ctatgccttg agataaacca tctaaaggat ctttgctaaa ttttttagct tctattatag
     2161 caaggttgtt tccttcatat ctaagcaaat aatctgcaaa ttttctttgt gctcttttac
     2221 cacctaaaag ctttctacca tctgtaaaat aataatttct ttttatattt tcttcattcc
     2281 aagaactatc ataaagcttt gcatctataa attttactct agtatcatct tctgaataca
     2341 aattttgcat ttttacccca aagtgaaatt aaattttata attatagcat ttatactagt
     2401 ttttaaaaaa attattttca ctcttgactt atagctactc taatgtttta taattataaa
     2461 aaatcaaaaa aggagcgaaa atgcaataca aaattttaga aaacaatcgc atcgcaagta
     2521 aaggctatgc aatgcttagt aaagatgcga aattcacacc ctttgaattt agccgccacg
     2581 ctattggtga taatgatatt ttgattaaaa tcctatatgc aggtatttgt catagcgata
     2641 ttcacaccgc aagaagcgag tggggagaag ctacttatcc ttgcgtacct gggcatgaga
     2701 tagcaggaga agttatcgct gtgggtaaaa atgtgagcaa atttaaagta ggagattacg
     2761 caggggttgg ttgtatggta aattcatgcg gtgagtgcga tgcttgcaaa cgctcacaag
     2821 agcagttttg cgaaaatggc aaaaccatct ttacttacaa tagttgcgat gtatttcacg
     2881 gcaatgaaaa cacttatggg ggctactcaa acaacatagt tgtaagtgaa aaatttgcca
     2941 tttgtgtgcc aaaaaatgca ccaatgcata aggttgcgcc tttgctttgt gcgggcatta
     3001 ccacttactc gcctttaaaa ttttctaaga taaaagaagg ctcaagcgtt gctatagcag
     3061 gctttggcgg acttggtatg atggctgtaa aatacgctgt taaaatgggt gcaaaggtta
     3121 gcgtttttgc tagaaatgaa aacaaaaaag ccgatgcttt agctatgggt gtaagctcat
     3181 tttacacaag cactgataaa aacgccgtaa aagaacgctt tgatttaatc atctcaacca
     3241 ttccaacgcc ttataatcct gcaatttatt tggatttact taaatttggt ggcgaaatgg
     3301 ctatagttgg cttaccacct gtggaagata aggtaaatat aggcataaac gagcttgtac
     3361 ataaggcagg taaaaaggtt tatggctcgc taattggcgg tattgctgaa actcaagaaa
     3421 tgcttgattt ttctttaaaa cacgaaattt atccagaaac cgagcttatc acaccacaag
     3481 aaatcgataa agcttatgaa aatctaacct caggaaaggc taaatttcgc tatgttattg
     3541 atatgacaaa agaataattt aatacttatc aaaaatcaca tcgctaacgc taaatcccct
     3601 ttgcttagcg atgtctaaaa gctcttttat gcttttttca tcaattatat ttcttgctaa
     3661 aatccaaaga tattttttat caggactacc cacaatggca actttatact cgctatcaat
     3721 aaaaatgatt tcataattca ccttattaaa aaggttcata aagatattaa atctcactgc
     3781 taattgccta tttgaaacga tttttgcctt gccttttatg cttgaaattt cattttcttt
     3841 actgcaaaaa ttctcaattt ctacataagg aacgccattt ttatatttaa gctcgtattt
     3901 tgcctttgaa tttaggcaag atttttgaaa aaaagcaggt tttctagcca tttcaagcca
     3961 ttctcccata taattttgca aagaaagttc gccaattaat tcaagcattt ttttcctttt
     4021 tgtctttctc gccccatttg cacatagctt gtaaaatagg aattaaactt tgtccgcgtt
     4081 tggataagct atattctacc ttgggtggaa tttgagcgta ttcttttctg ataattaaac
     4141 catcattttc tagttctctt aaggtattgg ttaaagtttt aaaagatatg gagcttaaaa
     4201 agcgtttgag ttcattataa cgcacgattt catagcgaaa taagcagtat aaaatactca
     4261 ttttatattt tccattaatt aatgctagag tatagttaaa tccgcattct tcgaaattgc
     4321 actgagaatt ctctttagtc atttaacatt cctttagtat agtatcttac tttattttct
     4381 gtattgaaaa tgatattatg ctaagttata attgtatcat aaaatttaaa aaaggataaa
     4441 aatgaaaaat atactcttgc ttaatggcgc taaagaattt ggaaattcaa aaggacagct
     4501 taatttaaca ttgcataatc atgctttaga aattttaaaa acattaggat acgaagtaga
     4561 tcaaactcat atagatcaaa gatatgatcc taaagaagag atacaaaaat ttataaaagc
     4621 tgatgctgtg atctatcaaa tgccagcttg gtggatgggc gagccttgga tagttaaaaa
     4681 atatatcgat gaagtgtttg gtttgggtgc tggagtgctt tttaaaaatg atggaagaac
     4741 tcatgaaaat cctagtaaaa actatggaaa aggtggttta gatcatggta aaaaatacat
     4801 gttttctctc acttggaatg cacctcttga agcctttaat gataaaaatg aattttttga
     4861 aggaaagggt gtggatatgg tgtattggca tttgcataag gctcatgaat ttataggtat
     4921 gaaagcttta ccaactttta tgtgtaatga tgtggtaaaa aatcctcaag tggaaaaata
     4981 tctaaacgag tatgaactac acttgaaaaa aattttttaa aaaatttgac ttaaaaattt
     5041 caaggtgtaa cattgactcg aacaaagtat ttgtatatct tgcttgtttt agctatgttt
     5101 ttatggggct catcttggcc tacttctaag attttatcag cttatgctga tacttctgtg
     5161 attacttttt ggcgtttttt ctttgttttg ctaggttctt tgatggtatt gggcttttta
     5221 agaattcctt taagccttga aaaatccatt ttaaaatggg tgctgatagc aggaatttta
     5281 aatgggcttt atacttttgt attttttatt gccattaagc atggtttagc tggaaaaggc
     5341 ggtgttttgg ttacaactat gattcctatt ttttcttatt tgatatttat gatagcgata
     5401 ttatttcaaa aagataaaaa atcaactcac aagatcataa agagtgaaat tctaggctta
     5461 tttttaggtt tattatctgg attttgtttg ttaaatttag ggagtttaga agatttattt
     5521 ggcaaattta atattttatt tttaacttgt tcttttattt gggctttgat agcagtgttt
     5581 aatcataaag ccaaaggagt tcaccctttg gcgattaact tttatattaa tctcatttct
     5641 gttttaatgt tttcttgggt attgtttgat gtaaaaagtt atgaaatttt tcattttgaa
     5701 tttaaatttt ggatcagtat gtttgtcgtt gcttttttat caactattat aggtactagt
     5761 atttattatt atgggattca cattttaggg agcgttaagg caaattcttt tgttttaatc
     5821 actcctgcta gtgctttaat ttgtagttat tttatactag atgaggtgcc aaatgcactt
     5881 accttgttag gttgtgcctt ggctataggt gctatatatt ttatcaatat ttatggtaaa
     5941 aaagcttaga ttaaattttc aaaatcaaga ttgatttttt gatccatggc tttaaatttc
     6001 atttctcttt gtttataaag ctctaaggct tcttgcatgc taatgctttg aaatttaaag
     6061 ctagaaccta acttagcttg tgcgagtaag cttagatcat tttctataac cgtgcctatt
     6121 tttgtataac ctcctgtgct ttgtcttcct gccattaaaa tgataggaat accacttttt
     6181 ggcacttgta tgcttccaaa aactgcagga tctgagatga tatctgctga gtttttatgc
     6241 tctatacttt cactagattc tgcgtaaatt gccattctat cgctttttga acctacttta
     6301 tagctagtat ttaaaaaagt atctatgcct ttttgagtaa aagcatcttc atttgttcct
     6361 aaaataacgc gtataatagg ctctttatgg cttttaaaaa gaggattttc acattctcta
     6421 gcttctaaat taaaaggtat aaaagtatta tgagtattta aaatatcatc tttttgcaaa
     6481 gctcttcctt caaaaaatcc aactcccatt ttagcatcgc tggatttaga gtttaaaaag
     6541 ctttttattt caaagccacc tgctacgcat aaatatccac gaaaacctat ttttgctaaa
     6601 ccaagctcta aaatatcgcc tttatttgct ttatatactt tataagtttt gattttttga
     6661 ttattaagct ttgcttcaaa tttagcccca cttaaaacaa aataattctc atctaaaaat
     6721 ttatattttc caccttttaa acaaagctca actcctgctt catcttgttt gtttccaagt
     6781 aagatatttg ccattcttaa agcatcttca tccatagccc cacttcttgc tatgccaaat
     6841 ttagcaaatt tttttctacc aaagtcttgc aaacttgaat ttatagatgc ttcaatgatt
     6901 tttatactca taaatttcct tttgatagac ttttttagca acttgctctt ggatatcgaa
     6961 aaattcatct tttgaaatag ctttaaattt taaaaacata cccgctttta aaagagtagg
     7021 atttttttca tcttctttat caaaaaattc caaaggtgtt ctagcaatga tttgccaacc
     7081 ccctgggctt gatataggat aaactcctgt ttgtttatcg gctatgccta cacttccagc
     7141 ttctattttt gctctagggc ttgaaaggcg tggggtaaaa agcctttcat ctaaacctcc
     7201 aagataagga aaacctgcca taaaacctag cataaaaaca agataataag gcttagtgtg
     7261 aagagatata agctcttctt ttgaaatttg attgtgtttg cacacaaatt ctaaatccag
     7321 tccaaattct tcatcataac aaagtggaac ttctatacaa agacttgagt tttgttctgc
     7381 aagtttaata tcctttttaa ttttttccaa aaaatcaagc aaggaattta aagaaagtat
     7441 acaaggatta aaatatataa gcaagcttgc ataagcactt actaactcat caataccata
     7501 aatttcacct tcttttaggg ctttttgtat cctttgttct gtacttaaaa cataagcatt
     7561 gatttgaggt gaaatttctt gctcaaaacg taaaagcaaa gccttgcttc cgctaaaatg
     7621 cacactaaac attgctaaaa cctatataaa attttccaaa gcacaaattt gaatttgttc
     7681 tttttctaaa ttttctttga tttttttaac aaattctaaa gcttttgcat tatccccatg
     7741 aacacaaata ctatcggctt tcaaatcaat ttctttgcca tttatgcttg taactttgct
     7801 ttcttttatc atttttatca cgcgtttgat agctaaattt tcatcgtgta ttaatgcccc
     7861 ttctaatttt cttgaaacta aagtgccatc atcattataa gcacgatctg caaaaacttc
     7921 attagcatat cttaaacctt ttttcttagc cgcttcattc atagcagaat tactaagccc
     7981 tagaaaaata atattttcat caaaactcgc cactgcctca caaagtgcta aggctaaatt
     8041 ttcatcaata gctgccatat tataaagtgc accatgggct ttaaaatgct gtattttcat
     8101 accttttgcc ttggcaaagc caaataaagc tcctagttga tacaaggcat agtttttagc
     8161 ctcttcaaag cttatttgca tattgcgtct tccaaaaccc aaaagatcag gataagatgg
     8221 gtgtgctcct atgcaaacac cattttgctt ggctaaattt aaggttttat ccatgacaca
     8281 aggatcaccc gcatgaaagc cacaagcgac atttactgag cttacaaatt ttaaaatttc
     8341 ttcatccatt cccattttat aggcgccaaa actttcccct aaatcactat ttaaatccac
     8401 tttgaacatt atttgacctt gtatatttaa ttattgattt tattatatct aaagaagaat
     8461 tttaaataag ctaaaagttt tgaaaaataa ataaaaaagt tacaataagt aaaaaatgat
     8521 attttaagca ggttaaaacc tgcttaattt ttagtctttt ctcgtttttg catcaatcac
     8581 aaataaaggt ttattaagaa gtttaaaatc agcaataaaa tttaaagtct tatcacttgt
     8641 tacccattta ataaatttgc tagcttctgt ataatttaca tttttacaat gcttaggatt
     8701 tgttgctata acagaataga aatttttaag actatcatcg ccttcattta cgattactaa
     8761 gtttggtttg cctttttcat tggcttcata tttgatatag gtaccacgat cagttaaaat
     8821 cacacctttt ttttcttcag cgattttaat gcttgctagc ataccttgtc cgctttgttg
     8881 ataccagctt tgtttttcag gaacaccgcc aagatttttc caaaggcttt tttctttatt
     8941 atcagtgcct gatttatcgc ctcttgagat gaaagtaagc ttttcatttt tgataagttc
     9001 taagctttct tttaaatttt tacctttaaa tttagaagct aaagatttat ctgcgatgat
     9061 gataaaatca ttatacatca caggagttct atctacgcca aagccttttt tcataaattc
     9121 tttttcagcc tttggagaat gcacaaaaag cacatcagcg ttgcaatctt cacccatttt
     9181 taaagctgca cctgttccta ccgcaaccca ttttaaggta ttgccacttt ctttttcata
     9241 aaggggtttt agagcatcta aaagtcctgt attgtcagtg cttgttgtgg ttgccatttt
     9301 aagttctgct gcacttgcac ttaaagctaa agcaagggct aaagaaatga tttttttcat
     9361 tttttctcct tataaattta cataaaaaaa tattttagca taattatgct aaaattactt
     9421 attttaaaaa ggatattttt ggattatatt tttgatggtt ttaagcaagc tttattttta
     9481 cttttcaatg ctgatgaaag tgtaatttcg gctataaaaa ctacactttt aagctcaagt
     9541 atttctatag ttttggcttt gcttataggt tttcctttgg gatttatctt aggctttttt
     9601 gattttaaat tcaaacgctt tataaaactt atcatagata ctagcctctc ttttccaaca
     9661 gttgcagtag gacttatact ttatgcactg atttcaagtc gaggaccttt gggggaattt
     9721 ggactacttt ttactataaa ggctttaatt ttagggcagt ttgtcttagc gcttcctata
     9781 gtgatcgcac ttttttcaaa tttgatagaa aacatgaata aaaaacattt tttacttata
     9841 aaatcttttc acctaagtcc tttaaaactt gttttaatga tgatttatga attacgcttt
     9901 gctttgatta gcgtcgttgc actagcttat ggacgcattg tagcagaagt aggagtagcg
     9961 atgatagtag gtggaaatat caaatacgac actagaacca taaccacagc tatttcactt
    10021 gaaacaaaca aaggcgaatt tgctagcggt atagctttgg ctttggtttt aatcctcatt
    10081 gccttttgtt taaatttcat cacacacaaa ctcaaaagaa cataaaatga tagaaatttc
    10141 taatcttttt ttcaactatc aaaacaaaga agttttaaaa atcaaaaatt taaaacttga
    10201 tacaagtaaa attagcatct taatgggagt gaatggaagt ggaaaatcta catttttaag
    10261 aatattaaaa tttttagaag gagatttttc aaaaaatatt tcttattttg gaaattttaa
    10321 acttaataat aaacaaaagc gtgaaattta tttgcttttt ccagagccca ttttgttaaa
    10381 tcgtagcgta agggcaaatt ttttatttac tttaaaaact tatgggatta aagaagatat
    10441 cgaagaacgt ataaaagaaa gtttgatgtt tttaaattta gatgaaagtc ttttaagtaa
    10501 atatcctaat gaactttcat caggacaaag tcaaaaaata gcttttgcta tagctttaag
    10561 cgtaagagcg aagtattatt tacttgatga accgagtgct tttttggata aaaatactac
    10621 gcttttattt aaaaaagcta ttcttaaaat gcatgaaaat ttcaatacag gttttttaat
    10681 cgcaagtcat gataaacatt ttttagattc tttggcgcaa aaaaaacttt atttacacag
    10741 tggagaaatt ttagaatttg aaaatactaa tgtttttgaa ctagaaaatc aaggtgtgaa
    10801 attttgtaat tttatagatt ttagtaattg taaaaaatat aaagatttta aaaaacctcc
    10861 aa
//
LOCUS       DAPWGO010000055        10855 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.056, whole genome shotgun sequence.
ACCESSION   DAPWGO010000055 DAPWGO010000000
VERSION     DAPWGO010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10855)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10855)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10855
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.056"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            107..1906
                     /locus_tag="RJ336_001230"
     CDS             107..1906
                     /locus_tag="RJ336_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin attachment protein"
                     /protein_id="HDZ5213679.1"
                     /translation="MAKKFIDVMDTSFRDGFQSVYGARVLMDDFFPAVEAAKEAGITH
                     FEFGGGARFQSLYFYLNEDAFAMMDRFRAIVGKDANLQTLARGVNTVTLDTGSSELID
                     LHAKLFAKHGTTTIRNFDALNDVNNLKFSGECIVKHGLKHEITITLMDLPPNCKGAHD
                     VPFYEKILKEILAAEIPFHSICFKDASGTSNPNKIYETIKMARKILPQDTHIRLHTHE
                     TAGVSIACYLAALEAGVDGIDLAAAPVSGGTSQPDILTMMHALKGKDYDLGGLEEEKI
                     LKYEEVLKDCLKEYFLPPEATMVNPLIPFSPMPGGALTANTQMMRDNNILDKFPQVIY
                     AMREVVEKGGFGTSVTPVSQFYFQQAFNNVMFGPWKKIAEGYGKMVLGYFGKTPVAPD
                     ANIIELASKQLNLEPTTELAINIADKDESKSIAYTKTLLEKESIETSEENIFIAAACK
                     EKGIAFLKGEAKVNVRKLASIPKPMSADENKFTVAVNGNKYHVEVSYGFDKDVNVKSV
                     KKVEENKNIISSNSTSSVDAENEVLAGISGNVFKIYVNEGEEVKSGQAIMVLEAMKME
                     IEVNAPKDGIISKLCIKIGDTVNEGEVLAIYKN"
     gene            1919..3493
                     /gene="pckA"
                     /locus_tag="RJ336_001231"
     CDS             1919..3493
                     /gene="pckA"
                     /locus_tag="RJ336_001231"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDZ5213680.1"
                     /translation="MKKFDNLGLDNIKEIFHNLSYDELNAHEKANDEGLSTDNDTFCV
                     DTGIFTGRSPKDKYFVKQDPSSKYIAWGKINQPITKELFDKLLTKAKQELSGKKIYVQ
                     DAFCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED
                     YKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANV
                     GEKGDVALFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDEGVFNFEGGCYAKTINLDPE
                     HEPEIYGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIEHIKNHEPSLKAGHP
                     KNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEP
                     FMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGS
                     ITKCEFENFEVFNLAIPKALEGVESVLLNPINTWSDKNAYIVTRDKLAHMFIQNFKRY
                     EDVKEGIEFSKFGPKI"
     gene            3504..4886
                     /gene="argH"
                     /locus_tag="RJ336_001232"
     CDS             3504..4886
                     /gene="argH"
                     /locus_tag="RJ336_001232"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDZ5213681.1"
                     /translation="MKNEMWSGRFSGASDELLKEFNASLNVDKTLFNEDIQGSIAHAT
                     MLESCGILKKEELDAIVKGLEQVKSEIEQGKFVFDIKDEDIHMAIEKRLSEIIGSEIG
                     GRLHTARSRNDQVATDFKLFVKKSHIELIKLLKELIQTMLEHAKVHKKTIMPSFTHLQ
                     HAQPVSFSFYILAYAFMLMRDVKRLQNSLELADFSPLGSCACAGTSYRTNREFSAEIL
                     GFKDIMPNAMDGVSDRDFALDLLYDIAVIFTHTSRLCEEMILFSSSEFSFVSISDSFS
                     TGSSIMPQKKNPDVCELIRGKTGRVYGNLISLLTIMKALPLAYNKDMQEDKEGLFDSV
                     KTAKDSLIILNAMLKEIRINKENMLNACKKGHLLATDLADYLVREKNIPFRKAHFIVG
                     NVVAQAEAQGIDISEIKDLSKIDPIFDEKAMELLNFEFSLNSKQSEGSSSIPSVEKQI
                     QILEGFIQNL"
     gene            complement(4908..6011)
                     /gene="ychF"
                     /locus_tag="RJ336_001233"
     CDS             complement(4908..6011)
                     /gene="ychF"
                     /locus_tag="RJ336_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDZ5213682.1"
                     /translation="MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAM
                     VEVPDLRLNELAKIVKPEKIMHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVIL
                     HIVRCFDEENITHVEGGVDPLRDVEIINTELILADIEQLSKKIEKLTKEAKANQKGAK
                     ESLELANSLLDHLNKGLAASSYPEKEGEIYQALIKELRLLSAKEVIYGANVDENGISE
                     DNDYVKALKEYAKKNDHEVIKLCAKIEEELVGLSDEESHEFLSSLGVNESGLDQIIRT
                     AFAKLGLISYFTAGIVEVRSWTIKKGWKAPKAASVIHNDFEKGFIKAEVISYEDYIQY
                     KGENGAKEAGKLRLEGKDYIVLDGDVMHFRFNV"
     gene            complement(6008..7459)
                     /locus_tag="RJ336_001234"
     CDS             complement(6008..7459)
                     /locus_tag="RJ336_001234"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDZ5213683.1"
                     /translation="MKFELNDKKLDAIKADFELVFIQDKNLKIFNKEKDFFKLNNYKG
                     EGALLDLNNKKLYLELKSLAYEDIRLSLCTAYKTLEKLNIKSVKLPSIIGDCVVRSFA
                     SLVEGVLFGAYKFDKYKSEKKTRTLERFIISSEELNGKKFNKDEAKIGLERGEILANA
                     TNFTKNIVNEIPEIYTPLKMAEDAQNLAKENKNITCKIYDEKFLAKEKMNAFLAVNRA
                     SVHPPRLIHLSYKATNAKKRVVFVGKGLTYDSGGLSLKPADFMLTMKADKSGAAAAMG
                     IIKAVAELALDLEVHCILGATENMIGGNAYKPDDVLISREGVSIEVRNTDAEGRLVLA
                     DCLSFAQDLKPDLLIDMATLTGACVVGLGEFTSAIMGNNEELQNDFYLSSKKSGEYTT
                     ILHFNPHLRELIKSNIADVSNTASSRYGGAITAGLFLDKFIRKEYKDKWLHLDIAGPA
                     YTEKSWGYSSFGAGGAGVRMCVNYLIQILRKAK"
     gene            complement(7456..8052)
                     /locus_tag="RJ336_001235"
     CDS             complement(7456..8052)
                     /locus_tag="RJ336_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDZ5213684.1"
                     /translation="MEEFLKNLLYQYKDLAYIIIFLWCILEGELALILAGIFAHQGHV
                     NLGFVIFIAGLGGFVGDQIYFYIGRYNKRYIQKKLKTQRRKFAVAHLLLQRFGWPIIF
                     IQRYMYGFRTIIPMSIGITRYSAKKFAIINLFSAWVWASITILLAWYFGEQIWKMVTW
                     AEEHWYYAAIIIIAFLSLLLFGFKQMEKAILKDKRKKS"
     gene            complement(8071..8619)
                     /gene="apt"
                     /locus_tag="RJ336_001236"
     CDS             complement(8071..8619)
                     /gene="apt"
                     /locus_tag="RJ336_001236"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDZ5213685.1"
                     /translation="MIKLTQEEQKYLLDSIRIIPDFPKKGIIFRDITTLLNNKEALNF
                     LLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFSCEYD
                     LEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMN
                     LKDLNGANKLEKLTSVYSVLEI"
     gene            complement(8616..8948)
                     /locus_tag="RJ336_001237"
     CDS             complement(8616..8948)
                     /locus_tag="RJ336_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213686.1"
                     /translation="MFTNWLVLTILICATIYLIVMLFYYKTLLNKEKTSKDFIKNNLD
                     DTEIVIRKLQIQLQRSLGNIDILTEELNKIKADLTSLRTRNSQYRLENDKLRQRIKEL
                     EAKIEALL"
     gene            complement(8948..9385)
                     /gene="rpiB"
                     /locus_tag="RJ336_001238"
     CDS             complement(8948..9385)
                     /gene="rpiB"
                     /locus_tag="RJ336_001238"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HDZ5213687.1"
                     /translation="MLREKIYIASDHAGFELKEKICVFLKEKNIIFNDLGTNTCASCD
                     YPDYAHLLAEKIDERSFGILICGSGIGISIAANRHKNIRCALCHESLSAELARRHNDA
                     NVLALGGRLIGVELAIDIIEKFIQTPFEEGRHMQRIQKIEVKI"
     gene            9551..10105
                     /locus_tag="RJ336_001239"
     CDS             9551..10105
                     /locus_tag="RJ336_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HDZ5213688.1"
                     /translation="MKLILIGSSTGGPNQLKFLLKDIDIKNTCVVIAQHMSASFIPSF
                     VGQFNKEAFSEVCLLNDKEILSNKIYICPKNTILSGNLNIVAAWQDVASSFKPSVDLL
                     FHSAVSLVKTNKILAIILTGMGDDGAKGLFELYKTGVRCLCENEADSVVYGMPKRAKD
                     MNPHLKPMSLKEIKKEIVNFIDQD"
     gene            10121..>10855
                     /locus_tag="RJ336_001240"
     CDS             10121..>10855
                     /locus_tag="RJ336_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheR"
                     /protein_id="HDZ5213689.1"
                     /translation="MEKKITPSELELNEFIKIINEMSGIDLTDKKNILALKLNKFLEG
                     TNTKNFSEFLGKLKSNRQLKQETLDFVTIGETYFLRELAQLKEIIYYAKSLEKRVNIL
                     SAPCSSGEEVYSLALLAAQNFIKDMYILGIDINSSVIEKAKLGKYQGRTLQRLSESEK
                     RRFFLESEDKFYTINKNELCTCKFELCNVFEEKFSRLGKFDIIASRNMIIYFDHESKL
                     KLMERFHRILNDKGRLYVGNADLIPET"
BASE COUNT         3714 a         1565 c         1827 g         3749 t
ORIGIN      
        1 tttggttgtt ttttattcgt tttatatcgc ctatagcaat aattttggta atgtgttatc
       61 aaatttttgt ataataatga aaaaatattt tttttaagga aaaataatgg ctaaaaaatt
      121 catcgatgta atggatacaa gctttagaga tggttttcag tccgtttatg gggctagggt
      181 tttaatggat gatttttttc ctgcagtaga agcagcaaaa gaagcaggca ttacacattt
      241 tgaatttggc ggtggtgcta gatttcaaag cttgtatttt tatcttaatg aagatgcttt
      301 tgccatgatg gatagattta gagctattgt aggaaaagat gctaatcttc aaactttagc
      361 aagaggggtc aataccgtta ctttagacac tggaagtagt gagcttattg atttgcatgc
      421 aaaacttttt gcaaaacacg gtactacaac gataagaaat tttgatgccc ttaatgatgt
      481 aaataattta aaatttagtg gtgaatgtat agtaaaacat gggttaaagc atgaaattac
      541 tatcacttta atggatttac cgccaaattg taaaggtgct catgatgtgc ctttttatga
      601 aaaaatttta aaagaaattt tagcagcaga aattcctttt catagtattt gtttcaaaga
      661 tgcaagtgga acttctaatc caaataaaat ttatgaaacc attaaaatgg ctagaaaaat
      721 tttacctcaa gatacacaca ttagacttca tacgcatgaa actgcaggag tgagtatagc
      781 ttgctatctt gcagcacttg aagcaggggt tgatggtatc gatttggctg cggctccagt
      841 aagtggcgga acctctcagc ctgatatttt aaccatgatg catgctttaa aaggcaaaga
      901 ttatgattta ggcggacttg aggaagaaaa aattctaaaa tacgaagaag ttttaaaaga
      961 ttgtttaaaa gaatattttt taccacctga agctactatg gtaaatccac ttattccttt
     1021 ttcccctatg ccaggaggag ctttaacagc aaatacacaa atgatgagag ataataatat
     1081 cttagataaa tttccacaag tcatttatgc tatgagagaa gttgtagaaa aaggtggatt
     1141 tggtacttca gttaccccag tttctcaatt ttattttcaa caagctttta ataatgtgat
     1201 gtttggacct tggaaaaaaa tcgcagaagg ttatggaaaa atggtgcttg gttattttgg
     1261 aaaaactcca gttgcacccg atgcaaacat tattgaactt gcttcaaaac agcttaattt
     1321 agaacctact acagagcttg ctattaatat agctgataaa gatgagagta aaagtatagc
     1381 ttataccaaa accttgcttg aaaaagagag tatagaaacg agtgaagaaa atatatttat
     1441 tgcagcagct tgtaaagaaa aaggtatagc atttttaaaa ggagaggcaa aggtaaatgt
     1501 acgcaaatta gctagtatac caaaacctat gagtgcagat gaaaacaaat ttactgtagc
     1561 tgtaaatggt aacaaatatc atgtagaggt aagctatggt tttgataaag atgttaatgt
     1621 taaaagtgta aaaaaagtag aagaaaataa aaatattatt tcttcaaatt caacaagttc
     1681 tgtagatgct gaaaatgaag ttttagcagg tatttcaggt aatgtcttta aaatttatgt
     1741 taacgaaggt gaagaagtaa aatcaggtca agccatcatg gttttagaag caatgaaaat
     1801 ggagattgaa gttaatgctc caaaagatgg aattatttca aagctttgta ttaaaatagg
     1861 cgatactgtt aacgaaggcg aagtattagc tatttacaag aattaaagtg agggaaagat
     1921 gaaaaaattt gataatttag gtttagataa cataaaggaa atttttcata atttaagtta
     1981 tgatgaatta aatgctcatg aaaaagcaaa tgatgaaggt ttaagtacgg ataatgatac
     2041 tttttgtgtg gatacaggga tttttacagg tagaagtcct aaagataaat attttgtaaa
     2101 acaagatcca tctagtaaat atatagcttg ggggaagata aaccagccta ttacaaaaga
     2161 attatttgat aaacttttaa ctaaagcaaa acaagaatta agtggaaaga aaatttatgt
     2221 tcaagatgct ttttgtggcg cttctttgca aagtcgcaaa gcagtaagat ttgttactga
     2281 aattgcatgg caagcacatt ttgttaaaaa tatgtttatt cgcccaagtc aagaagaact
     2341 tgagaatttt aaagcagatt ttattgttta taatgcttgc aaatgtatca atgaagatta
     2401 caaacaagat ggtttaaatt cagaggtttt tgtaatcttt aatgttgaag aaaatatagc
     2461 ggttattggt ggaacttggt atggcggaga aatgaaaaaa ggtatttttt ctatgatgaa
     2521 ttattggttg ccactagaaa ataaactttc tatgcattgt agtgcaaatg tcggagaaaa
     2581 aggcgatgta gcgcttttct ttggacttag tggcactgga aaaactacgc tctcaaccga
     2641 tccaaaaaga aaacttatag gtgatgacga acatggttgg gatgatgaag gtgtatttaa
     2701 ttttgagggt ggttgttacg caaaaacaat caatctcgat cctgaacatg agcctgaaat
     2761 ttatggtgcc attaaaagaa atgcactttt agaaaatgta gttttaagag ccgataagag
     2821 tgttgattat gctgatgctt caaaaacaga aaatacaaga gtttcttatc ctatagagca
     2881 tattaaaaat catgagccta gtttaaaagc aggccatcca aaaaatatta tatttttaag
     2941 tgcagatgct tttggaattt tacctccagt aagtaaacta agcaaagagc aagctatgta
     3001 ttatttttta agtggttata cagcaaaagt agctggaact gagcgtggta taacagagcc
     3061 tcaagcaact ttttcagctt gctttggaga accttttatg cctttacatc caacggttta
     3121 tgcgagattg cttggtgaaa agattgaaaa acatgaagtt aatgtttatc ttgttaatac
     3181 aggttggagt ggcggaagct acggtgtggg taaaagaatg agcattaagg ctactagggc
     3241 ttgcattaat gctattttag atggaagtat tacaaaatgc gaatttgaaa attttgaagt
     3301 gtttaattta gctattccaa aagctttaga aggtgtagaa agtgtacttt taaatcccat
     3361 aaatacttgg tcagataaaa atgcttatat tgtaacaaga gataaattag cacatatgtt
     3421 tatacaaaat ttcaaacgct atgaagatgt caaagaaggc attgaattta gcaaatttgg
     3481 accaaaaatt taaggcattt ataatgaaaa atgaaatgtg gtcgggacgc tttagtggtg
     3541 caagcgacga gcttttaaag gaatttaatg cgagtttaaa tgtagataaa actttgttta
     3601 atgaagatat acaaggatct atagcacatg ctacaatgct tgaaagttgt ggtattttaa
     3661 aaaaagaaga attagatgct attgtaaaag gcctggaaca agttaaaagt gaaatagagc
     3721 aaggtaaatt tgtttttgat atcaaagatg aagatattca tatggctata gaaaagcgtt
     3781 taagcgagat tataggtagt gaaattggcg gaagactaca tactgcaaga agtagaaatg
     3841 accaagtggc cactgatttt aaactttttg tcaaaaaatc tcatattgaa cttataaagc
     3901 ttttaaaaga attgattcaa accatgctcg aacatgctaa agtgcataaa aaaactatta
     3961 tgccaagttt tacacattta caacacgctc agcctgtgag tttttctttt tatatcttag
     4021 cttatgcttt tatgttaatg cgagatgtta agcgtttgca aaatagtcta gaacttgcag
     4081 acttttcacc acttggatct tgtgcatgtg caggaacaag ctatagaacc aatcgtgagt
     4141 ttagcgctga aattttagga tttaaggata ttatgccaaa tgctatggat ggggtgagtg
     4201 atagggattt tgctcttgat ttactttatg atatagcagt tatttttaca cacacttcaa
     4261 gactttgcga ggaaatgatt ttattttcaa gttcggaatt ttcttttgta tccataagtg
     4321 atagtttttc aacaggaagt tctatcatgc ctcagaaaaa aaatcccgat gtttgtgaac
     4381 ttatacgcgg aaaaacaggg cgtgtctatg gaaatttaat ttctctttta actataatga
     4441 aagctttacc tttagcctat aataaagata tgcaagaaga taaagaaggg ctttttgata
     4501 gtgtaaaaac tgctaaagac agtttaatca tcttgaatgc aatgttaaaa gaaatacgaa
     4561 ttaataaaga aaatatgctt aatgcttgta aaaaaggtca tttattggct accgatttgg
     4621 cagattattt ggtgcgtgaa aaaaatattc cttttagaaa agcacatttt atagtgggaa
     4681 atgttgttgc acaagctgaa gcacaaggta ttgatataag tgaaattaaa gatctttcaa
     4741 aaatagatcc tatatttgat gaaaaagcta tggaactttt aaattttgaa ttttctttaa
     4801 attctaagca aagtgaaggc tcaagttcta ttccaagcgt agaaaagcaa attcaaattt
     4861 tggaaggctt tattcaaaat ttataaatat tgtttaggct attttgccta aacattgaat
     4921 ctaaaatgca ttacatcgcc atctaaaacg atatagtctt ttccttcaag gcgtagtttt
     4981 cctgcttctt tagcgccatt ttcgcctttg tattggatat agtcttcata agaaatcact
     5041 tcagctttta tgaaaccttt ttcaaagtca ttgtgaatta cacttgctgc ttttggtgct
     5101 ttccagcctt ttttgattgt ccaagaacgc acttcaacta taccagcggt aaaataactg
     5161 attagtccaa gtttagcaaa agcagtgcgt atgatttgat caagaccact ttcattaact
     5221 cctagagaac ttaaaaattc atggctttct tcatcgctta atcctactaa ttcttcttca
     5281 atttttgcac aaagtttgat aacttcatga tcattttttt tagcgtattc ttttaaagct
     5341 tttacataat cattatcttc actaatacca ttttcatcaa catttgcacc ataaattact
     5401 tctttggcgg aaagcagtct taattctttg attagggctt gataaatttc gccttctttt
     5461 tcagggtaag agcttgcagc taagcctttg tttaaatgat caagtaaaga atttgcaagt
     5521 tcgaggcttt ctttagcacc tttttggttg gctttggctt ctttggtgag tttttctatt
     5581 tttttactca gttgctcaat atctgctaaa ataagctctg tattgataat ttctacatcg
     5641 cgtaaaggat caactccacc ttcaacatgg gtgatatttt cttcatcaaa acaacgcact
     5701 atgtgtaaaa taacctcagt ttcgcgtata tttgaaagaa atttatttcc taagccttca
     5761 cccttacttg cacctttaac aagtccagca atatctacaa attctattaa agaatgcata
     5821 attttttcag gttttacgat tttggcaagt tcattaagtc ttaaatcagg aacttcaacc
     5881 atggctttgt taggctctat ggtgcagaaa ggatagtttg cgctttgggc attttgtgct
     5941 ttagttaaag cattaaaagt cgttgatttg ccaacatttg gaagtcctac tatacctaca
     6001 cttaaactca tttagctttc cttaaaattt gaattaaata attaacgcac attctaactc
     6061 cagctccacc tgcgccaaaa ctagaatatc cccaagattt ttctgtataa gcaggtcctg
     6121 ctatgtcaag atgtagccat ttgtctttat attctttacg aataaattta tctaaaaata
     6181 atcctgcggt aattgcacct ccgtagcgac tagaggcagt gttgctaaca tcagcaatat
     6241 ttgattttat aagttctctt aagtgagggt tgaaatgtaa gattgtggta tattctccac
     6301 tttttttgga gcttagataa aaatcatttt gcaattcttc attatttccc ataatagcgc
     6361 ttgtaaattc tccaagtcct acaacgcaag ctccagtaag agttgccata tcgataagta
     6421 aatcaggttt taaatcctgt gcaaaagaaa gacaatcggc taaaaccaag cgtccttcag
     6481 catctgtatt tcttacctct atgcttacac cttcacgact gattaacaca tcatcaggct
     6541 tataagcatt gccgcctatc atattttcag ttgcacctaa aatgcaatgc acttctaaat
     6601 ctaaagcaag ttcagctacg gcttttatga ttcccattgc tgctgctgca ccgcttttat
     6661 cagctttcat tgtaagcata aaatcagctg gttttaagct taatccaccg ctatcgtaag
     6721 ttaagccttt tccaacaaat acaacacgtt tttttgcatt tgtggcttta taacttagat
     6781 gaatgaggcg tggaggatgt actgaggcgc gatttactgc taaaaaggca ttcatttttt
     6841 ctttagctaa aaatttttca tcataaattt tacaagtgat gtttttattt tctttagcta
     6901 aattttgtgc atcttctgcc atttttaaag gggtgtaaat ttcaggaatt tcattgacta
     6961 tatttttggt aaaatttgta gcattggcta aaatttctcc acgctctaaa cctatcttag
     7021 cttcatcttt attaaatttt ttaccattta attcttcact tgaaataata aatctttcta
     7081 aagttcttgt ttttttctcg cttttatatt tgtcaaattt ataagctcca aaaagtacgc
     7141 cttcaactaa agatgcaaaa cttctaacta cacaatctcc tattatgcta ggaagtttta
     7201 cgcttttaat attaagtttc tcaagagttt tatatgctgt gcaaagactt aatcttatat
     7261 cctcataagc aagactttta agctctaaat aaagcttttt attgtttaag tctaataatg
     7321 caccttcacc tttgtaatta ttaagtttaa aaaaatcttt ttctttgtta aaaattttta
     7381 aatttttatc ctgtataaaa acaagttcaa agtctgcttt tatagcatct agttttttat
     7441 cgtttaattc aaatttcatg attttttcct tttatcttta agtatagctt tttccatttg
     7501 tttaaaacca aataataaaa gggataaaaa agctataata ataatggctg cataatacca
     7561 atgttcttca gcccaagtca ccatcttcca aatttgttct ccaaaatacc aagctaaaag
     7621 tatagtgatt gatgcccaaa cccaagcact aaaaagattg ataatagcaa atttttttgc
     7681 actataacgc gtgattccta tactcatagg tataatggtt ctaaagccat acatatagcg
     7741 ttgtataaaa ataataggcc aaccaaaacg ttgtaaaagt aggtgtgcta ctgcaaattt
     7801 acgcctttga gtttttaatt ttttttgtat gtagcgttta ttatatcttc ctatatagaa
     7861 ataaatttga tcgcctacaa aaccgccaag acctgctata aatataacaa agcctaaatt
     7921 tacatgtcct tgatgggcaa aaatacctgc taaaattaaa gctaactctc cttctaaaat
     7981 acaccataaa aaaataataa tataagctag atctttgtat tggtaaagta aattttttaa
     8041 aaattcttcc atttgtacct ttctatagtt ttaaatttct aaaacactat aaactgaagt
     8101 aagtttttca agtttatttg ctccatttaa atctttaaga ttcattaaaa aacaagcttc
     8161 aacacatttt gctccagctt tttgaatgag ttcatatgaa gctatagctg ttccgccagt
     8221 tgctattaaa tcatctacaa gtaaaactct tgcattttga atatttttaa atgcatcttt
     8281 atgaagttct actttatcgc tgccatattc aagatcgtat tcgcagctaa aggtttcaaa
     8341 agggagtttt ccaggttttc taataggcac aaaaggaaga ttaagttttg cacaaatcat
     8401 agatgcaaag ataaatcctc tgctttctgt tcctgctatg aagtctagat tgtaatcttt
     8461 gtagcgttct tttaaatgtt taagtagaaa atttaaagcc tctttgttat ttagtagagt
     8521 ggtaatatct ctaaagataa ttcctttttt tggaaaatca ggaataattc taatgctatc
     8581 aagcaggtat ttttgttctt cttgtgttag ttttatcata ataatgcctc gatttttgct
     8641 tctaattctt taattctttg tcttaatttg tcattttcca aacgatattg agaatttcta
     8701 gttcttaaag atgtaaggtc tgctttgatt ttattaagtt cttctgtgag tatatctata
     8761 tttccaagac ttctttgaag ttgaatttgt agttttctaa tgacaatctc agtatcatca
     8821 agattgtttt tgataaaatc ttttgatgtt ttttctttat taagtagagt tttatagtaa
     8881 aacaacatta caataagata gatagttgca caaatcaata tagttaaaac aagccagttt
     8941 gtaaacatta tatttttacc tcaatttttt gaattctttg catatgtctc ccttcttcaa
     9001 aaggagtttg aatgaatttt tctataatat ctatagctaa ttcaaccccg attaatcttc
     9061 cgcctaatgc caaaacattg gcatcattat gccttcttgc aagttctgca cttaagcttt
     9121 catgacataa tgcacaacga atgtttttat gacgatttgc tgcaatagaa attccaattc
     9181 cacttccaca aataagaatg ccaaagcttc gttcgtctat tttttcggca agtaaatgtg
     9241 cataatcagg ataatcgcag cttgcgcaag tgtttgttcc taaatcgtta aaaattatat
     9301 ttttttcttt taaaaatacg caaatttttt cttttaattc aaaaccagca tgatcactag
     9361 caatataaat tttttcccta agcattggtt tcctacatta ctatataaaa taagataaaa
     9421 acctaatctt atcatattaa atcataaaaa cagcttttct ttttttaaaa ataagcttta
     9481 tttttcttta tatatgttag aattacgtga caagaaaaat aaaatttcaa taaattaagg
     9541 ggagaagaaa atgaagctca tactcatagg atcttcaaca ggtggtccta atcagcttaa
     9601 atttctttta aaggatattg atataaaaaa tacttgtgta gttatagctc aacacatgag
     9661 tgccagtttt attccatctt ttgtggggca atttaataaa gaagctttta gtgaagtgtg
     9721 cttattgaat gataaagaga tattaagcaa taaaatttat atttgcccta aaaatactat
     9781 tttatctgga aatttaaata ttgtagccgc ttggcaagat gtggcttcaa gctttaaacc
     9841 gagtgtggat ttactttttc attccgctgt ttctttggta aaaacaaata aaatacttgc
     9901 tattatttta acgggcatgg gagatgatgg tgcaaaaggt ttatttgagc tttataaaac
     9961 aggagttaga tgtttatgcg agaatgaagc agatagtgtc gtttatggta tgccaaaaag
    10021 agcaaaagat atgaatccgc atttaaaacc tatgagctta aaagaaatta aaaaagaaat
    10081 tgtaaatttt attgatcagg attaataaaa ggaaaattgc atggaaaaaa aaataactcc
    10141 tagcgaatta gaacttaatg aatttataaa aattatcaac gaaatgagcg gtattgattt
    10201 aaccgataaa aaaaatatac tagctttaaa gttgaataaa tttcttgaag gaactaatac
    10261 taaaaatttt tccgaatttt tgggaaaatt aaaaagcaat agacaactta aacaagaaac
    10321 tttagatttt gtaaccatag gtgaaactta ttttttaaga gaattggctc aattgaaaga
    10381 aataatttat tatgccaaaa gcttagaaaa gagagtaaat atcctaagtg ccccttgttc
    10441 aagtggagaa gaggtatatt ctttggcatt attggctgca cagaatttta ttaaagatat
    10501 gtatatttta ggcattgata ttaattcaag cgtgattgaa aaagcaaaac ttggaaaata
    10561 tcaaggaaga actttacagc gattgagcga gagtgaaaaa agaaggtttt ttttagaaag
    10621 cgaagataaa ttttatacta ttaataaaaa tgagctttgt acttgtaaat ttgaactttg
    10681 caatgttttt gaagaaaaat tttcaagatt gggaaaattt gatattatag cttctagaaa
    10741 tatgattatt tattttgatc atgaatcaaa actaaaactt atggagagat ttcatagaat
    10801 tttaaatgat aaaggaaggc tttatgttgg caatgctgat ttaattccag agact
//
LOCUS       DAPWGO010000056        10765 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.057, whole genome shotgun sequence.
ACCESSION   DAPWGO010000056 DAPWGO010000000
VERSION     DAPWGO010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10765)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10765)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10765
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.057"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            53..982
                     /locus_tag="RJ336_001241"
     CDS             53..982
                     /locus_tag="RJ336_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2860 family protein"
                     /protein_id="HDZ5213690.1"
                     /translation="MKKYLFSCVLASILTQSATAVEFQEGFSGNLSIGVGARDIKSNI
                     STLANSDYLSSYNADNSDSSFIPFIGVELYYGNLIDNDRIFIKNYNGRDISGIALGYE
                     RAYLERFSTSFSVISSLREKAYANPYATGNREETDVDRYGFKISQLYESDLGKFTASY
                     LFSKNKYDKDAVEYSSLKREGYYHEFELNYNYSLLNLGLSYDYNDADGKAQSYSRYGL
                     SMGANLAFANDYIFTPNLSLSKYEAVGTDPIFHKKQDGNIVKLNLKVVKNQFLGYNGL
                     YGFANYGIEKRNSDIGFYDETYQVVLTGIGYKF"
     gene            complement(1021..2349)
                     /locus_tag="RJ336_001242"
     CDS             complement(1021..2349)
                     /locus_tag="RJ336_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDZ5213691.1"
                     /translation="MSNIFSTLSPFRLFIKCAVPNVVSMAFISFYYIVDGIFVGKYLG
                     SDALAALALIIPFIMMSFALADMIAIGSAVQISMHLGLGKKNLARKIFSSSILIIFLI
                     SCFIGILEYFLGPVLIDCLNVSDEIKTMAKKCMFVFALFAPFTMLSFALDNYLRICGK
                     TTYSMIMNIIIALSNIVFDYLFIVVFGWGLFSVALATCLGIVLSGIFGIIPFLFQNLE
                     LKFSSLYINLRIFKNILYNGSSEFFGNVSGSLYSIFANFVLLKISTTQAVAAFSIVLY
                     IDSFIIMLIIAMGDAMQPALSYNYAKKDFLRIKAIIKVVFFAGGILSLFSIVFILIFG
                     ENLITLFAKENDQEFKTFAYTALMLFAFNYLFAWFNILSGSFLTAFNKASFSLVLSLT
                     QNLFMPLFFLLLLSYFIGLNGVWLSPFFAEFCVLILAWIFFKRIFKDLSL"
     gene            complement(2556..3491)
                     /locus_tag="RJ336_001243"
     CDS             complement(2556..3491)
                     /locus_tag="RJ336_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HDZ5213692.1"
                     /translation="MKKIDLIVVGAGPTGIGCAVEAKLKNKEVLILEKSNNICQTLMQ
                     FYKDGKRVDKAYKGCEGTNHGHVPFEDGTKESTIETFQNALKEHNIEIEFGSEVESVK
                     NENGVFLVSTAKGVYECKNIIVAIGRMGKPNKPDYKLPMTLTKIINFNANSVLGNEKI
                     LVVGGGNSAAEYAVDLANSNQVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGID
                     INEVEDDSGKAKVNFTDGTSDIYDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENK
                     QSNVKGIFVAGDIATKNGASIVTGLNDAVKILSVL"
     gene            3562..4794
                     /locus_tag="RJ336_001244"
     CDS             3562..4794
                     /locus_tag="RJ336_001244"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDZ5213693.1"
                     /translation="MRNLLENIKKNSQKLLNLTPKDKEKIILKLAQILRENFKIILEA
                     NKKDMANFTKSGAMKDRLLLDEKRILALCEGLEKIAHIEDPIGKISKGWKNYAGLNIQ
                     KISIPLGLICVIYEARPSLSAEIAALMIKSSNACVFKGGSEAKFTNEAIFTLVNKVLK
                     EFDLQDCFAMFTQRDEILQILAFDDLIDVIIPRGSSNMIQEIANNTKIPLIRQDKGLC
                     HAFVDQSANLDMALKIILNAKCQRVSVCNALETLLIHEKIAKNFISLLIPEFEKFKVK
                     IHAHENALAYFNNSNLEVFKADENTFDTEWLDFALSVKLVKDCDEAIEHINKHSSLHS
                     ETIISNDASNIAKFQRLINSSCIYANASTRFSDGGEFGFGGEVGISTSKLHARGPMGV
                     EDICTYKYIISGEGQIRE"
     gene            4791..5876
                     /locus_tag="RJ336_001245"
     CDS             4791..5876
                     /locus_tag="RJ336_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDZ5213694.1"
                     /translation="MNKIEMLKQHFKEIAKLNSSEQVWQMPFFAALGVGIVLGLSVFF
                     GKLNYGLIAMIGALSFLYVPNTPLYHRMAVVMCCSFGIVSSFFLGILTHFLPAIFAFI
                     PIGLVAMGSSILIRYYNIGAPGYFFFVFSCVLGAYSPFEAKDFIFLVGLVFLGAMVAN
                     LMALLYSIVVIYGFKNALPSEIPPREYICFDAVFVDSLIMGSFVAFSIFIGTFLELER
                     SYWIAISCTAIMQGVTLNSIWIKQIQRIIGTALGVCFAWWLLSKQFHDIELVLLMMSL
                     FFIGQFLVNRNYALAMIFFTPYATYLSKAANFMSENADTLILARLIDVVIGSILGLLG
                     GFVIYKPYLRVHFERIAKYIFRIKRKA"
     gene            complement(5873..6670)
                     /locus_tag="RJ336_001246"
     CDS             complement(5873..6670)
                     /locus_tag="RJ336_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDZ5213695.1"
                     /translation="MKIDTHAHIFLKKLNTVANARYKPDYDASFKDYKANLDHYGFDK
                     GVLVQPSFLGVDNEFLLQSIEKDENIKAIVVVDEGVKFDELKKLKERKACGVRLNLIG
                     KELPNFKTMVWTQFFENLSKLKMQIEIQRDLDNNLVDIVKNLIPYGCNIVIDHLARAN
                     ANLTNLEDLICLKNSRIFFKISGFYRAKIDYVNNEQAVKFAKKIYEILKEYFPLSNFV
                     FGSDWPHTNFEANVNFSSALAAFNEVVVSKKEQEQILGDNACALFDF"
     gene            complement(6681..7973)
                     /locus_tag="RJ336_001247"
     CDS             complement(6681..7973)
                     /locus_tag="RJ336_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDZ5213696.1"
                     /translation="MIMVFLIISSIIVAIILGYITRHNVGIFAMIFAYIIGAFFMDLA
                     PKKIIAFWPISIFFVIFAVSLFYNFATVNGTLEKLAGHLMYRFANHPYLLPFVIFVVS
                     AIIAALGAGFYTVLAFMAPLTFLLCDKIGLSKIAGAMAINYGALGGANFMTSQSGIIF
                     RGLMENSGIEANEAFVNSSIIFAFTIILPIVVLSFFVFNAFKNNIKISVISKPDSFDY
                     KQKTTLILMFMMIVVVLIFPVLNIIFPHNETISYFNKKIDIAMIAMIFVAIALFLKLA
                     DEKQVVALIPWGTLIMICGVGMLISIAVEAGVIKLFSDLVENEINVIFIPLIMCAIAA
                     FMSLFSSTLGVVTPALFPIVPSIAASSGLSEALLFSCIVVGAQASAISPFSSGGSLIL
                     GSCPDKYKEKLFKDLLIKAVPIGFIAAILATIIMSFIL"
     gene            complement(8092..9096)
                     /locus_tag="RJ336_001248"
     CDS             complement(8092..9096)
                     /locus_tag="RJ336_001248"
                     /inference="COORDINATES: protein motif:HMM:NF022646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 domain-containing protein"
                     /protein_id="HDZ5213697.1"
                     /translation="MEKFIKQFSFIALENIFRELPNKITHSFNDINDIKPPKLMYPIF
                     YGSYDWHSSVHSHWLLVKILKDFSHFAPKDEIIKALDSQFSKEKAEGELKYLQNPAHK
                     GFERPYGWGWFLKLALEINLLAKENDKAKIWAKNLEGIADFFVKEFKEFLPKMDYPIR
                     VGTHFNSSFALYFALEYARFKKDQELEYCIIQSAKKWFLNDKNMQALEPCGDEFLSPV
                     LMEAVLLSAVLPKNDFVKFFKVYLPNLEAKEPVTLFTPVSVSDRSDGKIAHLDGLNLS
                     RAWCFKILSNFCDENLKILLRNNAIEHFDKAIAHIEDDYLGSHWLGSFALLAMDVDIL
                     "
     gene            complement(9106..10059)
                     /locus_tag="RJ336_001249"
     CDS             complement(9106..10059)
                     /locus_tag="RJ336_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF979 domain-containing protein"
                     /protein_id="HDZ5213698.1"
                     /translation="MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYS
                     FTFLLAGVLPHFVMGCIVILLALIAGFNLLKPAKIEVSKEEKEYEIKHANIYKNKLFI
                     PALMVPLITLIGTFLFPYLSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDA
                     AHTMDHISWAALLPQILATLGVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMA
                     LFTIVMGNAFAAFPVITAAIALPILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFN
                     IVPAALLNLDDKNGVIKAQFMSGLVLLVANIFLMYFLAFRF"
     gene            complement(10046..10738)
                     /locus_tag="RJ336_001250"
     CDS             complement(10046..10738)
                     /locus_tag="RJ336_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF969 domain-containing protein"
                     /protein_id="HDZ5213699.1"
                     /translation="MEWLLLASIPLIVLGFALKINPFLVVTSVGIYAGLVSGFDFVKV
                     VSDIGKSFVDNRYVAIIWLILPLLAVLERKGLREQAKNLISKIKVASTGRILMCYFVF
                     RQVTAALGLLSLGGHAQMIRPLIAPMAEAAAKLKFKNLTHKDSQKIKAFSAGTDNVAV
                     FFGEDIFIAVHSILFIKAFYESNGIIVEPLHLSVWAIPTGILALIIHCSRLYLFDKRL
                     EKTYKGLSDDKS"
BASE COUNT         4029 a         1805 c         1441 g         3490 t
ORIGIN      
        1 acaattataa atgtaattta attacaaaca acaaacattt caaggagaac atttgaaaaa
       61 atatttattt tcctgtgttt tagcctccat tttaacccaa tcagctacgg ctgtagaatt
      121 tcaagaaggt tttagtggaa atttaagcat aggtgtgggt gcaagggata ttaaaagtaa
      181 tatttcaacc ttggcaaaca gtgattatct aagcagttac aatgctgata attcagactc
      241 ctctttcatt ccttttatcg gtgtagaact ttactatggc aaccttatag ataatgatag
      301 aatttttatt aaaaactaca atggaagaga tatcagcggt atagctttag gctacgaaag
      361 agcttattta gagcgtttta gcacttcttt ttctgtgatt tcctctttaa gagaaaaagc
      421 ttatgcaaat ccttatgcaa caggaaatag agaagaaact gatgttgata gatatggttt
      481 taaaatctct caactttacg aaagtgattt aggaaaattt acagcttcat atttatttag
      541 caaaaacaaa tatgataaag acgcagttga gtacagctct ttaaaaagag aggggtatta
      601 tcacgagttt gaattaaatt acaattacag tttgttaaat ttaggactaa gttatgatta
      661 taatgatgca gatggaaaag ctcaaagtta ctcaagatat ggtttaagca tgggagcaaa
      721 tttagctttt gctaatgact atatcttcac cccaaattta agtcttagca aatatgaagc
      781 agtaggaaca gatcctatct tccacaaaaa acaagacggt aatatagtta agcttaatct
      841 aaaagttgtt aaaaatcaat ttttgggcta taacggactt tatggttttg caaattatgg
      901 tatagaaaaa agaaatagcg atataggatt ttatgatgaa acctatcaag ttgttttaac
      961 tggaatagga tataaattct aaaaaagctc ctttgataaa atttaaaaaa gatctatcca
     1021 ctataaagat agatctttaa aaatcctttt aaaaaaaatc caagctaaaa tcaaaacaca
     1081 aaattcagca aaaaatggac ttaaccatac tccatttaaa cctataaaat aggataaaag
     1141 caaaagaaaa aataaaggca tgaataaatt ttgcgttaaa cttagaacca aagaaaagct
     1201 tgccttatta aaagctgtca aaaaagaacc gcttagaata ttaaaccatg caaaaagata
     1261 attaaaagca aaaagcatca aagctgtata agcaaaagtt ttaaattctt gatcattttc
     1321 ttttgcaaaa agtgttatca aattttctcc aaatatcaat ataaacacta tagaaaataa
     1381 agataaaatt ccccctgcaa aaaataccac ttttataatg gctttaatcc ttaaaaaatc
     1441 ttttttagca taattataac taagcgcagg ttgcatcgca tcccccatag caataataag
     1501 cattatgata aaactatcaa tatataaaac tatagaaaaa gctgccacgg cttgagtggt
     1561 agaaattttt aataaaacaa aatttgcaaa aatactatat aaagaacccg aaacattgcc
     1621 aaaaaactcg ctacttccat tataaagaat atttttaaaa attctcaaat ttatatataa
     1681 acttgagaat ttaagctcta aattttgaaa taaaaaagga ataattccaa aaataccact
     1741 taaaacaatt cctaaacaag ttgcaagggc taccgaaaac aagccccaac caaatacaac
     1801 tataaaaaga taatcaaata caatattact taaagctatg attatattca taatcatact
     1861 ataggttgtt tttccacaaa ttcttaaata attgtccaag gcaaaagaaa gcatggtaaa
     1921 aggtgcaaac aaagcaaaaa caaacataca ttttttagcc atagttttaa tctcatcact
     1981 aacatttaga caatcaatca aaacaggtcc taaaaaatac tccaaaattc caataaaaca
     2041 agagattaga aaaataatca atatactaga actaaatatc tttctagcta aattcttctt
     2101 gcccaaaccc aaatgcatag aaatttgcac tgctgaacct atagctatca tatcagccaa
     2161 agcaaaagac atcataataa agggaataat caaggctagt gccgctaaag catcacttcc
     2221 tagatatttt ccaacaaaaa ttccatcaac tatataataa aaagaaataa aagccatgct
     2281 tacaacattt ggcacggcgc attttataaa aagcctaaaa gggcttaaag tgctaaaaat
     2341 atttgacata taaatccttt aaaaatatta aaataaaata tttttaaaga cgctagtata
     2401 gtgcttgaag tcctaaaata tagaaattta gacgataagt tcttattgtt gtttttgtat
     2461 tgattttatt ttgcattttc atagatttaa attaaaataa taagaattat aaaatttact
     2521 tattaataag tcaaatttag cccaaaggct aaattttaaa gcacggaaag aatttttaca
     2581 gcgtcattta accctgtaac tatacttgct ccatttttag tagcaatatc tcctgctaca
     2641 aagatacctt taacattgct ttgtttattt tcatccatta aaggcacacc tttatcatca
     2701 acattaatcc cgcatttttg taaaaaatca agtggagtag aaccaccaat agcataaatg
     2761 attctatcat aaatatcgct tgtaccatcg gtaaaattta ccttagcctt gccactatca
     2821 tcttctactt cattaatgtc gattcctagt tttaactcta ctttacccga atttccagct
     2881 tcgtgaatat ctttaagatt gatatcattt aatcttgtaa attctttttt acgataacaa
     2941 aggctaactt gatttgaatt agccaaatcc acagcgtatt ctgctgctga atttccgcca
     3001 cctacaacaa gaattttttc atttcccaaa actgaattgg cattaaaatt aatgattttt
     3061 gttaaagtca taggaagttt gtaatcaggc ttattaggtt tgcccattct acctatagca
     3121 acgataatgt ttttacactc ataaacacct ttagctgtgc ttactaaaaa aactccattt
     3181 tcatttttaa cactctcaac ttcagagcca aattcaattt ctatattgtg ctcttttaaa
     3241 gcgttttgaa aagtttctat agtgctttct ttggtgccat cttcaaaagg aacatgtccg
     3301 tgattggttc cttcacatcc cttataagct ttatctactc ttttgccatc cttataaaat
     3361 tgcattaaag tttgacaaat gttatttgat ttttctagta tcaaaacttc tttgttttta
     3421 agcttggctt caaccgcaca gcctatgccc gttggacctg cacctactac gattaaatct
     3481 atttttttca tttatattta cctttcaatt ctaaattttt ttgtataatt tatcaagttt
     3541 tttgtaaata aaggattaaa aatgcgaaat ttgcttgaaa atattaagaa aaattctcaa
     3601 aaactactta acttaacacc caaagataaa gaaaaaatta ttctaaaatt agctcaaatt
     3661 ttaagagaaa atttcaaaat tatcctagaa gcaaataaaa aagatatggc aaatttcaca
     3721 aaaagcggag caatgaaaga taggctttta ttagatgaaa aacgtatttt agctctttgt
     3781 gaaggcctag aaaaaatcgc tcacatcgaa gatcctatag gcaaaatttc taaaggctgg
     3841 aaaaattatg cgggtttaaa catacaaaaa ataagcattc ctttaggact catttgtgtt
     3901 atttacgaag caaggcctag tcttagcgct gaaatcgcag ctttaatgat aaaaagttcc
     3961 aatgcttgtg tatttaaagg tggaagtgaa gcaaaattta caaatgaggc tatatttact
     4021 cttgttaata aagtacttaa ggaatttgat ttgcaagatt gttttgctat gtttactcaa
     4081 agagatgaga tcttgcaaat tctagctttt gatgatttaa tcgatgtgat catacctcgc
     4141 ggaagttcaa acatgataca agaaattgca aacaatacta aaattcctct cataaggcaa
     4201 gataaaggct tgtgccatgc ttttgtagat caaagtgcta acttagatat ggctttaaaa
     4261 ataatcctta atgcaaagtg tcaaagagta agtgtttgta acgctttaga aacgctttta
     4321 atccatgaaa aaattgctaa aaattttata agtcttttaa tccctgaatt tgaaaaattt
     4381 aaggtaaaaa ttcacgccca tgaaaacgct ttggcttatt ttaacaactc aaatttagaa
     4441 gtttttaaag cagatgaaaa tacctttgat acagaatggc ttgattttgc tttaagtgta
     4501 aaattagtaa aagattgcga tgaagctata gagcatatca ataaacacag ctccttgcat
     4561 tctgaaacca ttatctcaaa tgatgcttca aatatcgcta aatttcaacg ccttataaac
     4621 tcatcttgta tttatgctaa tgcttcaacg cgttttagcg atggaggaga atttggcttt
     4681 ggtggagaag ttggaatttc aaccagcaaa ttgcatgcaa gaggtcctat gggagttgaa
     4741 gatatttgca cttataaata tataatcagt ggggaaggac aaattcgaga gtgaataaaa
     4801 tagaaatgct aaagcaacac tttaaagaaa ttgctaaatt aaattcaagc gaacaagttt
     4861 ggcaaatgcc tttttttgcg gctttaggcg tgggtatagt tttagggctt agtgtatttt
     4921 ttggaaaatt aaactatgga ctcattgcca tgataggagc tttgtctttt ttatatgttc
     4981 caaacactcc tttatatcat agaatggctg ttgtgatgtg ctgttctttt ggcatagttt
     5041 ctagtttttt cttaggaatt ttaacccatt ttttgcctgc aatttttgcc ttcatcccta
     5101 taggacttgt ggccatggga agttctattt taattagata ttataacatt ggtgcacctg
     5161 gatatttttt ctttgtattt tcttgtgttt taggagctta ttctcctttt gaagctaagg
     5221 attttatctt tttagtgggt cttgtttttc ttggggcaat ggtagctaat ttaatggctt
     5281 tgttatattc tatcgttgtg atttatggat ttaaaaatgc tttacctagc gaaattccac
     5341 ctagagaata catatgtttt gatgcagttt ttgtggattc tttgatcatg ggttcttttg
     5401 tggctttttc tatatttata ggaacttttt tagaacttga aagaagttat tggatagcca
     5461 tttcttgcac agctattatg caaggtgtaa ctttaaattc tatatggatt aaacaaattc
     5521 aacgcatcat aggaacggcc ttaggagtat gttttgcatg gtggctttta tctaaacaat
     5581 ttcacgatat agagcttgtt ttacttatga tgtctttgtt ttttatagga caatttttag
     5641 tcaatcgaaa ctatgcttta gctatgattt tctttactcc ttatgctact tatctttcaa
     5701 aagcagctaa ttttatgagt gaaaatgcag atacattgat actcgctcgt ttaattgatg
     5761 tcgtaatagg aagcatttta ggacttttgg gtggttttgt aatttataaa ccttatctaa
     5821 gagtacattt tgaacgcatt gcaaaataca tctttaggat aaaacgaaaa gcttaaaagt
     5881 caaataaagc acaagcatta tcccctaaaa tttgctcttg ttctttttta gatacaacaa
     5941 cttcattaaa agctgctaga gccgatgaaa aattaacatt tgcttcaaaa tttgtatgtg
     6001 gccaatcgct tccaaaaaca aaattgctaa gtggaaaata ttcttttaaa atttcatata
     6061 ttttctttgc aaattttaca gcttgttcat tattgacata gtctattttt gctctataaa
     6121 aaccgctaat tttaaaaaat attctagaat tttttaaaca aattagatcc tctaaatttg
     6181 ttaagtttgc attagctctt gctaaatgat cgataacaat attacaacca taaggaatta
     6241 aatttttaac aatatcaaca agattattat ctaaatctct ttgaatttct atttgcattt
     6301 taagcttact taaattttca aaaaattgag tccaaaccat agttttaaaa tttggcaatt
     6361 ctttgccaat taaatttaat ctaactccac aagcttttct ttcttttagt tttttaagct
     6421 catcaaattt aacaccttca tcaaccacaa ctatagcttt tatattttca tctttttcga
     6481 tactctgaag caaaaattca ttgtcaacac ctaaaaaact tggctgaact aaaacccctt
     6541 tatcaaaacc ataatgatct aaatttgctt tataatcttt aaaactagca tcataatcag
     6601 gcttatatct tgcatttgca accgtattta actttttcaa aaatatatgt gcatgagtat
     6661 caatcttcat taaattatcc ttataaaata aaactcatta taatagtagc taaaatcgcc
     6721 gctataaatc ctataggcac agctttaata agtaaatctt taaataattt ttccttatat
     6781 ttgtcaggac aagatcctaa aattaaactt cctccagaag aaaaaggaga aatagcagaa
     6841 gcttgagccc ctacaacaat acaagaaaaa agcaatgcct cgcttaatcc actacttgca
     6901 gcaatgcttg gaactatagg aaaaagcgct ggagtaacca cgcccaaagt gcttgaaaaa
     6961 agcgacataa aagctgcaat agcacacatt attaacggaa taaaaatcac attgatctca
     7021 ttttctacaa gatctgaaaa taattttata acccctgctt caaccgctat gctaattaac
     7081 atccctactc cacaaatcat tatcaaggtt ccccaaggaa ttaaagcaac aacttgtttc
     7141 tcatcggcca attttaaaaa taaagcaatg gcaacaaaaa tcatggctat catagctata
     7201 tctatttttt tattaaaata actaattgtc tcattatgtg gaaaaataat atttagcaca
     7261 ggaaagatta aaacaacaac aatcatcata aacataagaa ttaaagtagt tttttgttta
     7321 taatcaaatg aatcaggttt tgaaataaca ctgattttta tattattttt aaaagcatta
     7381 aacacaaaaa aagataatac cacaataggc aaaattatag taaaagcaaa aataatacta
     7441 gaatttacaa aagcttcatt tgcttcaatg cctgaatttt ccatcaatcc tcgaaaaata
     7501 atcccacttt gagaagtcat aaaatttgct cctcccaaag caccatagtt tatagccata
     7561 gctccagcaa ttttgcttaa accgatttta tcgcaaagta aaaaagtaag tggtgccata
     7621 aaagctaaaa ccgtataaaa acctgctcct aaagcagcta taatagcact aaccacaaaa
     7681 ataacaaaag gaagcaaata aggatgatta gcaaaacgat acatcaaatg tccagctaat
     7741 ttttcaagag ttccatttac ggttgcaaaa ttataaaaca atgaaacagc aaaaataaca
     7801 aaaaatatag aaataggcca aaaagctatg atttttttag gagctaaatc cataaaaaaa
     7861 gctcctataa tataagcaaa aatcatagca aaaattccaa cattatgtct agtaatatag
     7921 cccaaaataa tagccactat aatactagag atgattaaaa aaaccattat catcctttaa
     7981 aatattatag ggcttataat atcaaaaaat atatttttca aagcataaaa acaaaatcta
     8041 aatttaaaaa atatctattt agtaacaaat ctactcatct tatgaaattt tttataaaat
     8101 atccacatcc atagcaagca aagcaaagct tcctaaccaa tgcgacccaa gataatcatc
     8161 ttctatatga gctatggctt tatcaaaatg ctctatagca ttatttctta aaagaatttt
     8221 taaattttca tcgcaaaaat ttgaaagtat tttaaaacac caagcacgac ttaaatttag
     8281 cccatctaga tgtgctattt taccatcgct cctatcactc acactcacag gggtaaataa
     8341 agttacaggc tcttttgctt ctaaatttgg caaatatact ttaaaaaatt ttacaaaatc
     8401 atttttaggt aaaacagcac ttaaaagcac cgcttccatc aaaacaggag ataaaaactc
     8461 atctccacaa ggctctaaag cttgcatatt tttatcattt aaaaaccact ttttagcact
     8521 ttggatgatg caatactcta attcttgatc ttttttaaat cttgcatact ctaaagcaaa
     8581 atacaaagca aaagagctat taaaatgggt tccaactcgt ataggataat ccatcttagg
     8641 caaaaactcc ttaaattctt taacaaaaaa atcagctatg ccttctaaat ttttagccca
     8701 aattttagct ttgtcatttt ctttagcaag taaatttatc tccaaagcca gttttaaaaa
     8761 ccatccccat ccataaggtc tttcaaaacc tttgtgcgca gggttttgaa gatacttaag
     8821 ctctccttct gctttttctt tgctaaattg agaatctaag gctttgatga tttcatcctt
     8881 tggggcaaaa tgagaaaaat cttttaaaat tttcaccaaa agccagtgag aatgcacgct
     8941 agaatgccaa tcataagaac cataaaatat aggatacata agttttggcg gtttaatatc
     9001 attgatatca ttaaaagaat gtgtgatttt atttggcaat tctctaaaaa tattttctag
     9061 tgcaataaag ctaaattgtt ttataaattt ttccattgtt tctccttaaa atctaaaagc
     9121 taaaaaatac attaaaaaga tattagctac aagcaaaaca agtcctgaca taaactgggc
     9181 tttaattacg ccatttttat catctaaatt taaaagtgcc gcaggaacta tattaaaatt
     9241 tgcagccata ggcgtcatta aagttccgca aaatccacta agcattccaa tcgctcctat
     9301 aatagcagga tttgcatgca tttgtatgat taaaatcggc aaagcaatag cagcagtaat
     9361 cacaggaaaa gctgcaaaag cattacccat tactatagta aaaagcgcca tagcaataca
     9421 atacacagct actgcaataa aagcattatc taaactaata taactagata aaagtttaga
     9481 tacttgatcg cccattcccg tagaaacaaa aactactcca agtgtagcca aaatttgcgg
     9541 taaaagcgcc gcccaactaa tgtgatccat agtatgtgct gcatccttaa cggctctttt
     9601 aggagaagcc ttaaacataa aacaagcaac cactgaagaa ataattatac ctataatcaa
     9661 agccatcaat gtagcatttt tattttcaaa aaaactcaaa tagggaaata aaaaagtccc
     9721 aataagtgta atcaaaggaa ccattaaagc aggaataaaa agtttatttt tataaatatt
     9781 tgcatgtttt atctcgtatt ctttttcttc tttactaact tcaatctttg ctggttttaa
     9841 taaattaaat cctgctataa gtgctagtaa aatcactata caacccatca caaaatgagg
     9901 caaaactcct gctagtaaaa aagtaaaact ataacttatc cagaataccc cgccgcttat
     9961 tcttgatttt atatctttag cttgattaga aaaacttaaa attccaaaaa ctaaaaataa
    10021 aattcctaca atataataaa gcaaatcaag acttatcatc actcaaccct ttataagttt
    10081 tttctaatct tttatcaaat aaataaagtc tagaacaatg gataattaaa gccaaaattc
    10141 cagttggtat agcccaaact gataaatgca atggctcaac aataatacca ttgctctcat
    10201 aaaaagcttt aataaataaa atagaatgca cggctataaa aatatcctct ccaaaaaata
    10261 cagcaacatt atccgttccc gcagaaaaag ctttgatttt ttgactatct ttatgtgtta
    10321 agtttttaaa tttaagctta gctgcagctt ctgccatagg ggctattaaa ggtcttatca
    10381 tctgtgcatg tccgcctaaa gataaaagcc ctaaagctgc agtaacttgt ctaaaaacaa
    10441 aataacacat taaaattcgt cctgtactgg caacttttat tttggatatt aaatttttag
    10501 cctgctctct taagcctttg cgttccaaaa cagcaagtaa aggtaaaata agccaaatta
    10561 tagcaacata gcgattatct acaaaagatt ttcctatatc actaacaacc ttaacaaaat
    10621 caaaacctga aacaagtcca gcataaattc caactgaagt taccactaaa aaggggttaa
    10681 tctttaaagc aaaacctaaa acaatcaaag gtatagaagc aagaagtaac cattccatca
    10741 accatctcca caatataaat tagaa
//
LOCUS       DAPWGO010000057        10487 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.058, whole genome shotgun sequence.
ACCESSION   DAPWGO010000057 DAPWGO010000000
VERSION     DAPWGO010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10487
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.058"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(12..395)
                     /gene="queF"
                     /locus_tag="RJ336_001251"
     CDS             complement(12..395)
                     /gene="queF"
                     /locus_tag="RJ336_001251"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDZ5213700.1"
                     /translation="MRYGEKEIKEFDVENMEIWPNDAKNDYIIKITLPEFMCCCPRSG
                     YPDFATIYLEYMPDKFVVELKAIKLYINTFMYRNVSHEASINEIYNTLKDKLKPKWIK
                     VVGDFNPRGNVHTVIECRSDMVVPK"
     gene            complement(641..3199)
                     /gene="flgE"
                     /locus_tag="RJ336_001252"
     CDS             complement(641..3199)
                     /gene="flgE"
                     /locus_tag="RJ336_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDZ5213701.1"
                     /translation="MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTM
                     FSQTVKIATAPTDGRGGSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFF
                     MVSDDGGLTRYLTRSGDFKLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFID
                     PGMHIPAAKSTEVAIKANLNSGLNIGTASRPIYGLDSIHGFNKKTGETKDENDTGTTQ
                     FYTTSKNSVEVTEKGVDAGALFNANGTGLNLREGQGIWVSYADAKFSTAGQGAQANQG
                     NNGVFDPNQKVNQNPVIFWGHEQKPTTLDITLNGVHIQNTSIKSLDEAIAYINTFTAP
                     NDTRDGTGVRAVKKADGSGIDFINDNADGTTDNMKNIDLQVNPNNSAGELINIRVTGN
                     PADFDWNRINLRPAGNPIIPGNGSAWITGTAAQNQDRIQIVTAHKYIYSSTPQTLPPL
                     YNPDGGHTWNQANMNTPGTPENNYQLAMSGSFLTTTPRVFRTTEDLRELLQRDARYGV
                     DYDGSGGFEVTGEDVNEGVSVVITENGNFSIANPNVASNPPAGINNPNRTTHNINFNV
                     TAYSNKQGTVSTNDAFTKIFKAFDGVLTVGGQIKESEQLKLSAFSAGLEIYDSLGSKH
                     TLEVQFVKQSTTQDGGNEWQMIIRVPEPAEINTTGEGPNNIVVGTARFNNDGSLASYN
                     PKTLNFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAI
                     RVDDKGNILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGAIVVGEAGT
                     GGRGEMKTSALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ"
     gene            complement(3403..3885)
                     /gene="ruvC"
                     /locus_tag="RJ336_001253"
     CDS             complement(3403..3885)
                     /gene="ruvC"
                     /locus_tag="RJ336_001253"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDZ5213702.1"
                     /translation="MNLKILGIDPGSRNCGYAIIEADKGKNILIEAGLIKIKPSTLQY
                     QITELCEGLDLIFKNHSFDEVAIEDIFFAYNPKTVLKLAQFRGALSLKILQIHGDFAE
                     YTPLQVKKAVTGKAKATKEQVAFMVKRLLGLSKDIKPLDITDAIAVALTHAANLRVRV
                     "
     gene            3981..5303
                     /gene="dnaA"
                     /locus_tag="RJ336_001254"
     CDS             3981..5303
                     /gene="dnaA"
                     /locus_tag="RJ336_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDZ5213703.1"
                     /translation="MNPSQILENLKKELSENEYENYLSNLKFNEKQSKADLLVFNAPN
                     ELMAKFIQTKYGKKIAHFYEVQSGNKAIINIQAQSAKQSNKSTKIDIAHIKAQSTILN
                     PSFTFESFVVGDSNKYAYGACKAIAHKDKLGKLYNPIFVYGPTGLGKTHLLQAVGNAS
                     LEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEE
                     FFFIFNEIKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIR
                     KKCEFNDINLSNDIINYIATSLGDNIREIEGIIISLNAYATILGQEITLELAKSVMKD
                     HIKEKKENITIDDILSLVCKEFNIKPSDVKSNKKTQNIVTARRIVIYLARALTALTMP
                     QLANYFEMKDHTAISHNVKKITEMIENDGSLKAKIEELKNKILVKSQS"
     gene            5463..6530
                     /locus_tag="RJ336_001255"
     CDS             5463..6530
                     /locus_tag="RJ336_001255"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDZ5213704.1"
                     /translation="MKLSINKNTLESAVILCNAYVEKKDSSTITSHLFFHADEDKLLI
                     RASDYEIGINYKIKKIRVESSGFATANAKSIADVIKSLNNEEVVLETIDNFLFIRQKS
                     TKYKLPMFNHEDFPNFPNTEGKNQFDIDSSDLSRSLKKILPSIDTNNPKYSLNGAFLD
                     IKTDKINFVGTDTKRLAIYTLEKANNQEFSFSIPKKAIMEMQKLFYEKIEIFYDQNML
                     IAKNENFEFFTKLINDKFPDYEKVIPKTFKQELSFSTEDFIDSLKKISVVTEKMKLHF
                     NKDKIIFEGISLDNMEAKTELEIQTGVSEEFNLTIKIKYLLDFLTSIEEEKFTLSVNE
                     PNSAFIVKSQGLSMIIMPMIL"
     gene            6559..8868
                     /gene="gyrB"
                     /locus_tag="RJ336_001256"
     CDS             6559..8868
                     /gene="gyrB"
                     /locus_tag="RJ336_001256"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDZ5213705.1"
                     /translation="MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVD
                     NSIDEAMAGHCDTIDVEITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGK
                     FDKDTYKVSGGLHGVGVSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGVIGKSK
                     KTGTTIEFWPDDQIFEVTEFDYEILAKRFRELAYLNPKITINFKDNRVGKHESFHFEG
                     GISQFVTDLNKKEALTKAIFFSVDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGT
                     HEAGFRMGLTRVISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKG
                     KLGSTYVRPIVSKASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKE
                     SLSVGTLPGKLADCQSKDPSESEIYLVEGDSAGGSAKQGRERSFQAILPLRGKILNVE
                     KARLDKILKSEQIQNMITAFGCGIGEDFDLSKLRYHKIIIMTDADVDGSHIQTLLLTF
                     FFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKDEKALSEYLIETGIEGLNYEGIGM
                     NDLKDYLKIVAAYRAILKDLEKRFNVISVIRYMIENSNLVKGNNEELFSVIKQFLETQ
                     GHNILNHYINENEIRAFVQTQNGLEELVINEELFTHPLYEEASYIFDKIKDRGLEFDK
                     DILEVLEDVETNAKKGATIQRYKGLGEMNPEQLWETTMDPSVRRLLKITIEDAQSAND
                     TFNLFMGDEVEPRRDYIQAHAKDVKHLDV"
     gene            complement(8894..9235)
                     /locus_tag="RJ336_001257"
     CDS             complement(8894..9235)
                     /locus_tag="RJ336_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monoheme cytochrome C"
                     /protein_id="HDZ5213706.1"
                     /translation="MKKIILILALFLSASWAQNLEINPDTGLIIDPDSPLVEANCLAC
                     HGSNLITNMHASRKAWLAAIRWMQDSEGLWEIEPEDEEKILNYLEKYYGEKYDTRRRI
                     PLAILLQNKTH"
     gene            complement(9238..10476)
                     /locus_tag="RJ336_001258"
     CDS             complement(9238..10476)
                     /locus_tag="RJ336_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HDZ5213707.1"
                     /translation="MKQNNQKEDRRDFLKNIGFGLLGISVLSNFSFENFLGSKALAKE
                     LPDFKIEGKKDLIYHGEKPLTAETEIYALDSDFTKPENFFVRNNGLPPSLETIKERLH
                     KGWTLEIDGESIINKKSYTIEDLKKKFKTYTYALTVECGGNGRSEVIPSTKGTQWGYG
                     AVACGRWTGVRLKDILKDCGIKNDAVYIGYYGIDTKLNGEETSPISRGVPISKALQDE
                     TLIAWAYEGKDIPLVNGYPLRLVCGGYPASTSGKWLYKISVRNKIHDGEKMEGSYKVP
                     VNPVKPGDFNYKGEMKIIESMPIRSVITNIKNGSEIKANKKFEVRGKAWAGELEVSEV
                     YVSNDYGVTWTKAKVEKPLNRLAWQKWSAQISIPTKGYYEIWARAIDSQGNSQPMVLA
                     QWNPGGYINNACHRVNVYGV"
BASE COUNT         3669 a         1738 c         1636 g         3444 t
ORIGIN      
        1 ttacttaaat attattttgg cactaccata tcgctacgac attctatcac cgtatgcaca
       61 tttccacgcg ggttaaaatc ccccacaact ttaatccatt ttggttttaa tttatctttt
      121 aaagtattat aaatttcatt gatacttgct tcatgtgaaa catttctata cataaaagta
      181 ttgatataaa gttttatcgc cttaagctca accacaaatt tatcaggcat atactcaaga
      241 taaatcgtcg caaagtcagg ataacccgaa cgcggacaac aacacataaa ttcaggtaaa
      301 gtgattttaa tgatatagtc atttttagca tcatttggcc aaatttccat attttctaca
      361 tcaaattctt tgatttcctt ttcaccataa cgcataaatt tccttaaatt taaattcgag
      421 caaaaattat aacaaaataa gtttttaaaa cgattataat acagataaga aaatgcaatt
      481 ttattgcaac tcacccccta gcaagagtga gttagcaata aattgaaggc agttcaagcc
      541 taagcctagt attacaagac taccaagata ggcttgtaaa gcaaggcttg ctcccttaaa
      601 gggagcaaaa aacaatattt tatagaatac taagcttaaa ttattgttta agctggatta
      661 gagtttgaag catttgatca ctcgttgaaa tggtttttga atttgcttga taacctcttt
      721 gaatgataat aagctctgtt aaagaacgac ttaaatccac atttgacatt tcaagagctg
      781 aggttttcat ctcaccacga cctcctgttc ctgcttcacc tactactata gccccactat
      841 ttgcagtgac tttaaaaaga tttccaccaa tttcctcaag acctgagtta tttgccactg
      901 aagccattgc tatttttgct acagcaaagg ttttgccatt agtaaattca cctaagatat
      961 tacctttatc atccacacgg atagcatcag gttttaagtt gcctgaagta taaccatcgg
     1021 ttgcctgtcc tgttagagtt gaagcagaat ttgagcttac aaggccatca ttgcttccac
     1081 ttgttccaaa ggaaagtttg atttgttgat ttggtgcagc accgttattt ggtgaaaaat
     1141 ttaaagtttt aggattgtaa ctagctaaag agccatcgtt gttaaatctt gctgttccta
     1201 cgacgatatt gtttggtccc tcacctgtag tgttaatctc agcaggttct ggcacacgga
     1261 tgatcatctg ccattcatta cccccatctt gagtggtact ttgcttgaca aactgcactt
     1321 ctaaagtatg ttttgaacct aaagaatcat aaatttcaag tccagctgaa aaagcagaaa
     1381 gcttaagttg ctcactttct ttgatctgac ctccgactgt taaaactcca tcaaaagctt
     1441 taaaaatttt agtaaaggca tcattggtac ttacagttcc ttgtttatta ctataggctg
     1501 ttacattaaa atttatatta tgtgttgttc tatttggatt attaatacca gctggtggat
     1561 tacttgcaac attaggattt gctatagaaa aatttccatt ttctgtaata acaacactta
     1621 caccttcatt tacatcttca cctgtaactt caaatccacc gcttccatca taatccaccc
     1681 catatctagc atctctttgt aaaagctctc ttaagtcctc tgtggttcta aaaacccttg
     1741 gtgttgtagt taaaaatgaa ccactcatag ctaattgata attattttca ggagtaccag
     1801 gagtattcat atttgcctga ttccaagtgt gtccaccatc aggattatac aaaggtggta
     1861 aagtttgagg agtagagcta taaatatatt tatgagctgt tactatttgt attctatctt
     1921 gattttgagc agcagttcct gttatccaag cactaccatt accaggtatt ataggattac
     1981 cagcgggtct taaattgata cgattccaat caaaatctgc gggattacca gtaaccctta
     2041 tattaataag ttctccagct gaattattgg gattaacttg taaatctata tttttcatgt
     2101 tatctgtagt gccatcggca ttatcattga taaaatcaat cccactacca tctgcttttt
     2161 ttactgctct tactcctgtt ccatctcttg tatcatttgg tgcagtgaag gtattaatat
     2221 aagctatagc ttcatctaag ctttttatag aagtattctg tatatgaact ccatttagag
     2281 taatatccaa agttgtaggt ttttgctcat gtccccaaaa tataacagga ttttgattta
     2341 ctttttgatt aggatcaaaa acaccattat taccttgatt tgcttgagct ccttgtccag
     2401 ctgtactaaa cttagcatct gcataagata cccaaattcc ttgaccttct cttaaattta
     2461 aacctgtacc attagcatta aataaagctc cagcatcaac gcctttttca gttacttcta
     2521 cagaattctt agaagtcgta taaaactgag tggttcctgt atcattttca tctttagttt
     2581 cacctgtttt tttattaaaa ccatgtatag aatcaagtcc atatatagga cgacttgctg
     2641 ttcctatatt taaaccacta tttaaattcg ctttgatggc tacttcggtt gattttgctg
     2701 cagggatatg catacctgga tcgataaaaa tattttgtgg agttcttgag ctatctatac
     2761 tttgagtatc ccaattgata ttccaccctt gaactacaaa gccggcatta ttgacaaaat
     2821 ttccataagc atcgagttta aaatccccac tccttgtaag atagcgagta agccccccat
     2881 catcactcac cataaaaaaa ccatcaccat ttatagccac atcagtgttt ttatctgtgg
     2941 tttgaactga accttgagaa tgaattctag ttgtagaact tactgaaacg ccaagaccga
     3001 tttgaagtgg attagatcca cctcttccat cagttggagc tgtagcgatt ttcacagttt
     3061 ggctaaacat agtcccaaaa tctgcacggg agtatttaaa accagtggta ttaacatttg
     3121 aaatgttatt accttcaaca tccatcgcaa cttgatgtgc ttgtagtccg cttacgccag
     3181 accaaagtga tctcatcatc ttaaatcctt tataaaatat tgctttaaaa aatttaacgc
     3241 tttggcttta aaaaactttt gcgtttatgt gaagtttaca agcaagttct gttccaactt
     3301 ttgaaatttt ttatgaattt tttaaaaatt tatagaaaaa atttaaaggt attttgggag
     3361 tttatgaagc tttgggcttt tgtgtaataa aaattaccaa aatcacaccc taactcttaa
     3421 atttgctgca tgggttaaag ccactgcgat agcatctgtg atgtctaaag gcttgatatc
     3481 tttactaagt cctaaaagtc tttttaccat aaaagcaact tgttctttgg ttgctttggc
     3541 ttttcctgta acggcttttt ttacttgtaa gggagtgtat tctgcaaaat ctccatgaat
     3601 ttgaagaatt tttaaagata gggccccgcg aaattgtgcg agttttaaaa cggtttttgg
     3661 attgtaagca aaaaagatat cttctatagc cacctcatca aaagaatgat ttttaaaaat
     3721 caagtccaaa ccctcgcaaa gctctgtgat ttgatactgt aaggtacttg gctttatctt
     3781 tataagtcct gcttctatga gaatgttttt tcctttgtca gcttctatga tagcataacc
     3841 acaatttctc gaacctggat ctatacctaa aattttcaaa ttcatacctt ttgaaaaata
     3901 aaatacaaaa gcggatttta accttttttt ataaaattta agataaaatt tatacattat
     3961 gcaaaattta aagagagatt atgaatccaa gccaaatact tgaaaattta aaaaaagaat
     4021 taagtgaaaa cgaatacgaa aactatttat caaatttaaa attcaacgaa aaacaaagca
     4081 aagcagatct tttagttttt aatgctccaa atgaactcat ggctaaattc atacaaacaa
     4141 aatacggcaa aaaaatcgcg catttttatg aagtgcaaag cggaaataaa gccatcataa
     4201 atatacaagc acaaagtgct aaacaaagca acaaaagcac aaaaatcgac atagctcata
     4261 taaaagcaca aagcacgatt ttaaatcctt cttttacttt tgaaagtttt gttgtagggg
     4321 attctaacaa atacgcttat ggagcatgta aagccatagc acataaagac aaacttggaa
     4381 aactttataa tccaatcttt gtttatggac ctacaggact tggaaaaaca catttacttc
     4441 aagcagttgg aaatgcaagc ttagaaatgg gaaaaaaagt tatttacgct accagtgaaa
     4501 atttcatcaa cgattttact tcaaatttaa aaaatggttc tttagataaa tttcatgaaa
     4561 agtatagaaa ctgcgatgtt ttacttatag atgatgtaca gtttttagga aaaaccgata
     4621 aaattcaaga agaatttttc tttatattta atgaaatcaa aaataacgat ggacaaatca
     4681 tcatgacttc agacaatcca cccaacatgc taaaaggtat aaccgaacgc ttaaaaagtc
     4741 gttttgcaca tgggatcata gctgatataa ctccacctca actagataca aaaatagcca
     4801 tcataagaaa aaaatgtgaa tttaacgata tcaatctttc taatgatatt ataaactata
     4861 tcgctacttc tttaggggat aatataagag aaatcgaagg tatcatcata agtttaaatg
     4921 cttatgcaac catactagga caagaaatca cactcgaact tgccaaaagt gtgatgaaag
     4981 atcatatcaa agaaaagaaa gaaaatatca ctatagatga cattttatct ttggtatgta
     5041 aagaatttaa catcaaacca agcgatgtga aatccaataa aaaaactcaa aatatagtca
     5101 cagcaagacg cattgtgatt tacctagcta gggcacttac ggctttgact atgccacaac
     5161 ttgcgaatta ttttgaaatg aaagatcata cagctatttc acataatgtt aaaaaaatca
     5221 cagaaatgat agaaaatgat ggttctttaa aagcaaaaat cgaagaactt aaaaacaaaa
     5281 ttcttgttaa aagtcaaagt taagtgaaag gatgtgaaaa ataaattcta gagtgtgaaa
     5341 aaaagaaatt aagcaaagta tgataaaata caaatttgat tattttgctt tgaagaattt
     5401 cacaatttca acaagcttat tattacaacg aatttaaaat taaaataaac caaggagaaa
     5461 aaatgaagtt aagtatcaat aaaaatactt tagaatctgc agtgatttta tgtaatgctt
     5521 atgtagaaaa aaaagactca agcaccatta cttctcatct tttttttcat gctgatgaag
     5581 ataaacttct tattagagct agtgattatg aaataggtat caactataag ataaaaaaaa
     5641 tccgcgtaga atcaagtggt tttgctactg caaatgcaaa aagtattgca gatgttatta
     5701 aaagcttaaa caatgaagaa gttgttttag aaaccattga taatttttta tttataagac
     5761 aaaaaagcac aaaatacaaa cttcctatgt ttaatcatga agattttcca aattttccaa
     5821 atacagaagg aaaaaaccaa tttgacattg attcaagtga cttaagtcgt tctcttaaaa
     5881 agatattacc aagtattgat acaaacaacc caaaatactc cttaaatggt gcatttttag
     5941 atataaaaac agataaaatt aacttcgtag gaactgatac aaaacgcctt gcaatctata
     6001 ctttagaaaa agcaaataat caagaattta gttttagtat ccctaaaaaa gctattatgg
     6061 aaatgcaaaa acttttctat gaaaaaatag aaatttttta tgatcaaaat atgcttatcg
     6121 ctaaaaatga aaattttgaa ttctttacaa aacttatcaa tgataaattt ccagattatg
     6181 aaaaagttat accaaaaact ttcaaacaag aactcagttt ttcaactgaa gattttatag
     6241 atagtcttaa aaaaatcagc gttgtaactg aaaaaatgaa acttcatttt aacaaagata
     6301 aaatcatctt tgaaggtata agtttagaca atatggaagc aaaaacagaa cttgaaattc
     6361 aaacaggagt aagtgaagaa tttaatctta ctataaaaat caaatattta cttgatttct
     6421 taacttctat agaagaagaa aaattcactt taagtgtaaa tgaacctaat tcagcattta
     6481 tagtcaaatc ccaaggacta tcaatgatta tcatgcctat gattttgtaa taaaacaagt
     6541 aaaagataaa ggaaaaatat gcaagaaaat tacggtgcga gtaatattaa agtcctaaaa
     6601 ggcctagaag ctgttagaaa acgcccaggt atgtatatag gagatacaaa cataggcgga
     6661 cttcatcata tgatttatga agttgtagat aattctatcg atgaagctat ggcaggacat
     6721 tgtgatacta tagatgtaga aatcactact gaaggaagct gtatagttag tgataatggt
     6781 cgtggtattc ctgttgatat gcacccaact gaaaatatgc caactttaac tgttgtttta
     6841 actgtcctac atgcaggggg aaaattcgat aaagatactt acaaagtttc aggcggtttg
     6901 cacggtgttg gggtttcggt tgtaaatgca ctctctaaaa aacttgtagc tacagttgaa
     6961 agaaatggag aaatttatcg tcaagaattt tcagaaggta aagttatcag tgaatttggt
     7021 gtgataggaa aaagtaaaaa aacaggaaca actatagaat tttggcctga tgatcaaatt
     7081 tttgaagtaa ctgaatttga ttatgaaatt ttggctaaaa gatttcgtga acttgcatac
     7141 ttaaatccaa aaatcactat aaattttaaa gataaccgcg taggcaaaca tgaaagtttt
     7201 cactttgaag gtggaatttc tcagtttgtt acagacttaa ataaaaaaga agctttaact
     7261 aaagcaattt tctttagtgt agatgaagaa gatgtgaatg ttgaagtagc tttgctttac
     7321 aatgatactt atagtgaaaa tttactctct tttgtaaata atatcaaaac cccagatggt
     7381 ggaacacacg aagctggttt tagaatgggc ttaactcgtg tgataagtaa ctatatagaa
     7441 gcaaatgcaa gtgctagaga aaaggataat aaaatcacgg gtgaagatgt gcgtgaaggt
     7501 ttaatcgctg ttgtgagtgt aaaggtgcct gaaccacaat ttgaaggaca aaccaaagga
     7561 aaacttggtt caacttatgt gcgtcctata gtttcaaaag caagttttga gtatttgact
     7621 aaatattttg aagaaaatcc tatcgaagct aaagctataa tgaacaaagc cttaatggca
     7681 gctagaggaa gagaagcagc gaaaaaagct agagaattaa cgcgtaaaaa agaaagttta
     7741 agcgtaggaa ctttaccagg gaaattggct gattgtcaaa gtaaagatcc aagtgaaagt
     7801 gaaatttatc ttgtggaagg ggattctgca ggaggttctg caaaacaagg tagggaaaga
     7861 tctttccaag ctatactgcc tttgcgtggt aaaattttaa atgttgaaaa agcaagacta
     7921 gataaaattt taaaatctga gcaaattcaa aatatgatta ccgcttttgg ctgtggtata
     7981 ggtgaagatt ttgatctttc aaaacttaga tatcataaaa tcatcatcat gacagatgcg
     8041 gatgttgatg gatctcatat acaaaccttg cttttaactt tcttcttccg ttttatgaat
     8101 gaacttgtgg caaatggaca tatttattta gcacaaccac ctttatatct ttataaaaaa
     8161 gctaaaaagc aaatttattt aaaagatgaa aaagctttga gcgaatacct gatagaaacg
     8221 ggaatagaag gtttaaacta tgaaggtata ggaatgaatg atttaaaaga ttatttaaaa
     8281 atcgttgcag cttatcgtgc gattttaaaa gatcttgaaa agcgttttaa tgtgatttct
     8341 gtgatacgct atatgataga aaattcaaat ttagttaaag gaaataatga agaattattt
     8401 agtgtaatca aacaattttt agaaacacaa ggacacaata tcttaaatca ttatatcaat
     8461 gaaaatgaaa ttcgagcttt cgttcaaact caaaatggct tagaagaact tgtgatcaat
     8521 gaagaacttt tcactcatcc actatatgaa gaagcaagtt atatttttga taagattaaa
     8581 gatagaggct tggaatttga taaagatatt ttagaagttc ttgaagatgt tgaaaccaat
     8641 gctaaaaaag gtgctactat acaacgctat aaaggtttag gggaaatgaa tcctgagcaa
     8701 ctttgggaaa ctacaatgga tccaagcgta agaagacttt taaaaatcac tattgaagat
     8761 gcacaaagtg caaatgatac ctttaatctc tttatgggtg atgaggttga accaagacgc
     8821 gattatatcc aagcacacgc taaagatgta aagcatttag atgtgtaaat ttatcattga
     8881 agaaatgatt tcttcaatga gttttgtttt gtaagagtat agctagagga attcttcttc
     8941 ttgtatcgta tttttctcca taatattttt caagataatt taaaattttt tcttcatctt
     9001 caggttctat ttcccaaagt ccttcactat cttgcatcca tcttatagct gctaaccaag
     9061 cttttctact tgcatgcata ttggtaatga gattggatcc atgacaagct aaacaatttg
     9121 cttccactaa cggtgaatca ggatcgataa tcaatcctgt atcagggtta atttcaagat
     9181 tttgagccca acttgcactc aaaaacaatg ctaagatcaa tataattttt ttcatactta
     9241 aactccataa acattaactc tatggcatgc attattgata tatcctcctg gattccactg
     9301 tgctaaaacc ataggttgac tgttaccttg actatcgata gctcttgccc aaatttcata
     9361 atatcctttt gttggtattg atatttgagc actccatttt tgccatgcta atctatttaa
     9421 tggtttttct acctttgctt tagtccatgt tacgccataa tcattgctta cataaacttc
     9481 actaacttca agttctccag cccaagcttt acctctaact tcaaattttt tatttgcttt
     9541 tatttcagaa ccatttttga tattagtaat tacagatctt ataggcattg attctatgat
     9601 tttcatctcg cctttatagt taaaatctcc tggttttacc ggatttacag gaactttata
     9661 agaaccttcc attttttcac catcgtgaat tttatttctt actgaaattt tataaagcca
     9721 tttaccgctt gtacttgcag ggtaaccacc acaaacaagt ctaagtggat agccattgac
     9781 taaaggaata tctttgcctt cataagccca agctattaga gtttcatctt gtaaagcttt
     9841 agaaatagga actcctctac taataggtga agtttcttca ccatttaatt ttgtatctat
     9901 gccataatat ccgatataaa ccgcatcatt tttgatgcca caatctttta aaatatcttt
     9961 taaacgcact cctgtccatc taccgcaagc tactgcacca taaccccatt gagttccttt
    10021 tgtgctaggt ataacttcgg atctaccatt tccaccgcat tcaactgtta aggcataagt
    10081 ataggtttta aatttctttt ttaaatcttc tatggtgtaa gattttttat tgataatgct
    10141 ttctccatcg atttctaaag tccaaccttt atgaagtctt tcttttatcg tttctaggct
    10201 tggtggtaag ccattatttc taacaaagaa attttcaggt ttagtaaaat cagaatcaag
    10261 agcataaatt tcagtttctg ctgttaatgg tttttcacca tgatagataa gatctttttt
    10321 accttctatt ttaaaatcag gcaattcttt tgccaaagcc ttacttccta aaaaattctc
    10381 aaaagaaaaa tttgacaata cgctgatacc aagcaaacca aatcctatat tttttaagaa
    10441 atctctgcga tcttcttttt gattgttttg tttcattgaa atatcct
//
LOCUS       DAPWGO010000058        10406 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.059, whole genome shotgun sequence.
ACCESSION   DAPWGO010000058 DAPWGO010000000
VERSION     DAPWGO010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10406
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.059"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..769)
                     /locus_tag="RJ336_001259"
     CDS             complement(<1..769)
                     /locus_tag="RJ336_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDZ5213708.1"
                     /translation="MLENKIIFVAGACGRIGKALCQKILLSKGIPILADINKECLNKL
                     QENLETNFKTKLLSLELDITKQESLQTALQKSQERYSKIDAFVNSSYPFGKDWGKTPY
                     YELKYEQICESLNLHLAGFMLAAQEFVKFFKQQGYGNIINLSSIMGVYAPKFENYEGT
                     SMQSSLEYSVIKAGINHMSSWLAKELFNQNIRVNTLASGGILDNQNELFLKAYRKCCA
                     SKGMLDADDICGTLVFLLSDESRFITGQTLVVDDGWGL"
     gene            complement(769..1476)
                     /gene="legF"
                     /locus_tag="RJ336_001260"
                     /gene_synonym="ptmB"
     CDS             complement(769..1476)
                     /gene="legF"
                     /locus_tag="RJ336_001260"
                     /gene_synonym="ptmB"
                     /EC_number="2.7.7.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N,N'-diacetyllegionaminic acid synthase"
                     /protein_id="HDZ5213709.1"
                     /translation="MAEILCTICARGGSKGVKNKNIRKINELEMIAYSIIQAQNSKLF
                     KHIVISTDSDEIASVAQKYGAEVFFKREAHLANDRTAKLPVMRDALLRSEEHFKTCFE
                     TLIDLDASAPLRSSLDIKKAYESFVENDNSNLITAVPARRNPYFNLVEIQNNKVVKSK
                     EGNFTTRQSAPKCYDMNASIYIFKRDYLLENDSVFGKNTGLFVMDESTAFDIDSELDF
                     KIVEFLISLKNLSPKDF"
     gene            complement(1469..2374)
                     /gene="ptmF"
                     /locus_tag="RJ336_001261"
     CDS             complement(1469..2374)
                     /gene="ptmF"
                     /locus_tag="RJ336_001261"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamine-D-fructose-6-phosphate isomerase
                     subunit"
                     /protein_id="HDZ5213710.1"
                     /translation="MKVLIIGFGSIGKKHFLALKNLNHEVSLLSLSAKKEEFKNTPIY
                     RSLKECDLNEFDLFIIANITTEHFNTLKTLDELVKDKTILVEKPLFKKSQNFTSSKNH
                     IYVAYLLRFHPVIVALKRLLKGEKIYFASLICNSYLPHWRALDYRQNYSAKKELGGGV
                     LLDLSHEIDLAFFLFKDLELIYSQNAKISELDITSDDFAFLALKNSQEAKIHIELDYF
                     SKFNKREIIIHTLEKSFKADLINNNIEIYHKNQSQKILNFENDTIKTLQNLHHAVFEK
                     DKELCDLKQALKVLEICDEVRKKNG"
     gene            complement(2371..3396)
                     /locus_tag="RJ336_001262"
     CDS             complement(2371..3396)
                     /locus_tag="RJ336_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HDZ5213711.1"
                     /translation="MDINKLKLTPDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISD
                     SNIRKALISGKTLKDSIKDIYTKNPITIKENTSKEQLLKISAKTDIYDFPVLNEKGQI
                     LSIKSISSLLKANPNSIIIMAGGLGSRLKELTKDTPKPMLKVGKKPILESIVQRLKNQ
                     NFENFIFCVNYKKQIIEDYFQKGQKFGVKISYIKERKKLGTAGALSLIKQEFKESFIV
                     MNADILTELDFNDLLKAHKKSKALMSVCVREFEQQIPYGVITQKQGFIENIEEKPTQK
                     FLVSAGIYVLENEILNLIAKNEYLDMPELIKLALQKGKVNTYIINDYWIDIGRPDEFL
                     KANEDFK"
     gene            complement(3405..4559)
                     /gene="legG"
                     /locus_tag="RJ336_001263"
     CDS             complement(3405..4559)
                     /gene="legG"
                     /locus_tag="RJ336_001263"
                     /EC_number="3.2.1.184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-N,N'-diacetylbacillosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HDZ5213712.1"
                     /translation="MSKRKICIVSATRAEWYLLRNLCHEIQNDKDLNLQIIATGAHLS
                     PEFGLTYKEIEKEFKITKKIPILLANDDKISLCKSMSLAFSAFSDAFEDLKPDMVVIL
                     GDRYEMLSVASVCLLMHIPLVHLCGGELTLGAIDDSIRHSISKMSHLHFVSHEIYKKR
                     LLQLGEEEKRVFNIGSLASTIIKNMNFLNKKDLEKALEMKLDKELYLITYHPLTLNVK
                     NTQKEIKTLLKKLDTLKNASLIFTKANADENGLLINEILQNYCQKNSHKAKLFDNLGS
                     QKYLSLMKIAKTMIGNSSSGISESPFFKTPCINIGDRQKGRLRTQNIIDCEINDLDQA
                     FEKLESKEFKQNLKNFKNPYDNDKNPNKFIKTCLKNANLDTILHKNFIDL"
     gene            complement(4552..5556)
                     /gene="legI"
                     /locus_tag="RJ336_001264"
     CDS             complement(4552..5556)
                     /gene="legI"
                     /locus_tag="RJ336_001264"
                     /EC_number="2.5.1.101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,N'-diacetyllegionaminate synthase"
                     /protein_id="HDZ5213713.1"
                     /translation="MKKTLIIAEAGVNHNGDLNLAKKLIEIAADSGADFVKFQSFKAK
                     NCISTKAKKAPYQLKTTASDESQLQMVQKLELDLKAHKELILHAKKCNIAFLSTPFDL
                     ESVDLLNELGLKIFKIPSGEITNLPYLKKIAKLNKKIILSTGMANLGEVEEALNVLCK
                     NGAKRQNITLLHCTTEYPAPFDEVNLKAMQSLKDAFKLDVGYSDHTQGIHISLAAVAL
                     GACVIEKHFTLDKNMSGPDHKASLEPQELKMLCTQIRQIQKAMGDGIKKASKSEQKNI
                     NIVRKSLVAKKDIQKGEIFSEENLTTKRPANGISAMRYEEFLGKIATKNYKEDELIRE
                     "
     gene            complement(5614..6735)
                     /locus_tag="RJ336_001265"
     CDS             complement(5614..6735)
                     /locus_tag="RJ336_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl sugar amidotransferase"
                     /protein_id="HDZ5213714.1"
                     /translation="MIYCDHCVMPNTRPGINFTKDKEGKNICSACINHKNKENIDYKA
                     RFKELEALCDKYRRMNGKFEYDCAIAVSGGKDSHFQVHIMKEKLGMNPILFSVEDNFT
                     MTEAGKKNLKNLSETFGCHIISLKPNIKTQKKVMLKTFEKYGKPTWFIDRLIYSYPFA
                     MALKFNTPLLVYGENVSYEYGGSDAKETPSAKEIFLNGVASDLNINEFIDDEIKEENL
                     QLFFNPNANDINKLNPIYLSYFIKWNSYSNYIFAKSRGFTDLEGEWYRTMCAENFDQV
                     DSIGYILHAWMKYPKFGHACASDYAARFVRYGLLSRKEAIELVQKRDHKLDNRCVEDF
                     CNFIGISKTTFWKIVEKHYNMDLFYKNDFGEFKLKNPLK"
     gene            complement(6852..7238)
                     /locus_tag="RJ336_001266"
     CDS             complement(6852..7238)
                     /locus_tag="RJ336_001266"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213715.1"
                     /translation="MDDLNCDFIHFFNTIYIKLIKLCGSNLERFTPLKDLKKLGFHII
                     CSKGNRGALANLLLFNEISSFFKIIEKYDYNFKECQTVYDLLYEKRNLLNIIDTIGIE
                     LCNKICKNLKEDDENFYHPKIFKKAL"
     gene            complement(7241..7558)
                     /locus_tag="RJ336_001267"
     CDS             complement(7241..7558)
                     /locus_tag="RJ336_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HDZ5213716.1"
                     /translation="MKEINIIDFGLMGKQISALFYLLGHEIGVYNKSKLNIYEFEKQI
                     KLLQRKIDFSNFNAGKINIYQHIEDLKNSLTIESLNEDLNLKKEIMQILRDNNIVFRI
                     QVL"
     gene            complement(7578..8174)
                     /locus_tag="RJ336_001268"
     CDS             complement(7578..8174)
                     /locus_tag="RJ336_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferase"
                     /protein_id="HDZ5213717.1"
                     /translation="MKNVIIIGAGGFARELYSYLKDANYEIIGYIDIQENIFFDLKYL
                     GNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKIGQ
                     GVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFL
                     ATRVSLLPCVNLEDNCIVSADSIISKTTHPINLFFIKI"
     gene            complement(8285..9439)
                     /gene="legC"
                     /locus_tag="RJ336_001269"
     CDS             complement(8285..9439)
                     /gene="legC"
                     /locus_tag="RJ336_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase LegC"
                     /protein_id="HDZ5213718.1"
                     /translation="MFEKEISFIKSLFNQENIALHEPCFIGNEKKYLLECIDNGFVSS
                     VGEFVTRFEEALKEKTKARFVIATNTGTAALHIALLANGIDENCEVITQSISFVATAN
                     AITYTGAKPVFLDIDENTLSLSPKALEHFLENQTYQKDNLSYNKTTHKPIKACVIMHT
                     FGLSAHIKAIKELCEKYHILLIEDAAEALGSTYENKALGTFGKCGILSFNGNKIITGG
                     CGGAILSDDENLAKLARHLSTTAKIPHPYEYDHDRIAYNYRLCNINAAILLAGLENLE
                     LFLENKRELAKIYKDFFKNHDKCKFIDEKSNEKSNFWLNTLLFKDENLRNIFLEECLK
                     NNIFVRPIWKSLPSLKAFQNCQSNELINTKNLEKRLVNLPSSVRIANKKE"
     gene            complement(9432..10403)
                     /gene="legB"
                     /locus_tag="RJ336_001270"
     CDS             complement(9432..10403)
                     /gene="legB"
                     /locus_tag="RJ336_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,6-dehydratase LegB"
                     /protein_id="HDZ5213719.1"
                     /translation="MRNILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLE
                     KSSFLKDMEVISGDLRDSFFCEKITKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGT
                     LNMLEAAKKNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSY
                     YNSFNLNVNIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDT
                     CEGFISLLNLKHFGEVYNIGSGVEYSMQEVLDLIQKILDSKVKIIQDEQRLRPKNSEV
                     FRLCCDANKLKKATNWQSKISLEEGLRQSIEYFKENLENYKSELYNV"
BASE COUNT         3185 a         1698 c         1522 g         4001 t
ORIGIN      
        1 ataagcccca tccatcatct actactaagg tttgccctgt gataaatcta ctctcatcac
       61 taagtaaaaa caccaaagtt ccacatatat catcagcatc taacataccc ttgcttgcac
      121 aacattttct ataagctttt aaaaaaagtt cattttgatt atccaaaatt cctccacttg
      181 ctagggtatt aacgcgtatg ttttgattaa aaagctcttt agctagccaa gagctcatgt
      241 gattaatccc tgcttttatc acactgtatt ctaaagagct ttgcatggaa gtgccttcat
      301 aattttcaaa ttttggcgca taaactccca tgatggagct aagattgatg atattaccat
      361 agccttgttg tttaaaaaat ttcacaaatt cttgagcggc tagcataaag cctgctaaat
      421 gtaaatttaa actttcgcaa atttgttcgt atttgagttc ataataaggc gttttacccc
      481 aatctttgcc aaaaggatag cttgagttaa caaaagcatc gattttgctg tatctttctt
      541 gacttttttg aagggcggtt tgtaaacttt cttgtttagt gatatcaagt tctaagctta
      601 aaagttttgt tttaaaattt gtttctaaat tttcttgcaa tttatttaag cattctttgt
      661 tgatatctgc gagtataggg atacctttgc taagaagtat tttttgacaa agcgctttac
      721 ctatacgccc acaagctcct gctacaaaga tgattttatt ttcaagcatt aaaaatcctt
      781 tggcgataaa ttttttaaag agattaaaaa ctctacgatt ttaaaatcaa gctcgctatc
      841 aatatcaaaa gctgtgcttt catccattac aaaaagccct gtgtttttgc caaaaacact
      901 atcattttct aaaagataat cccttttaaa gatataaata ctagcgttca tatcatagca
      961 ttttggggca ctttggcgag tggtaaaatt tccttctttg gattttacta ccttgttatt
     1021 ttgtatttct acgaggttaa aataaggatt gcgtctagca ggaactgcgg tgatgagatt
     1081 ggaattatca ttttcaacaa aactttcata agcttttttt atatcaaggc ttgagcgaag
     1141 cggggctgaa gcatctaagt ctatgagagt ttcaaaacac gttttaaaat gctcttcact
     1201 tcttagcaag gcatcacgca tgacaggaag ttttgcagtc cgatcattgg caagatgagc
     1261 ttctcttttg aaaaaaactt cagcgccata tttttgggct acacttgcga tttcatcact
     1321 atcagtactt atgactatgt gtttaaaaag ctttgaattt tgagcttgta tgatgctata
     1381 agctatcatt tcaagttcgt taatctttct aatatttttg tttttaacgc ctttgctacc
     1441 acccctagca caaatagtac ataaaatttc agccattttt tttccttact tcatcacaaa
     1501 tttcaagcac ttttaaagcc tgcttaagat cgcaaagttc tttgtctttt tcaaagactg
     1561 catgatgtaa attttgaagg gtttttatcg tatcattttc aaaatttaag attttttgac
     1621 tttgattttt gtgataaatt tcgatgttat tgtttatcaa atcggcttta aagctttttt
     1681 ctaaagtatg gatgataatt tctcttttgt taaatttaga aaaatagtct agttctatat
     1741 gaattttagc ttcttgtgaa ttttttaaag ccaaaaaggc aaaatcatcg cttgttatgt
     1801 caagctctga aattttagca ttttgggagt atataagctc taagtcttta aaaagaaaaa
     1861 aggctagatc gatttcatga gagagatcga gtaaaacccc accacctagc tcttttttag
     1921 cgctgtaatt ttgcctgtag tctaaagctc tccaatgggg caaataagaa ttacaaatca
     1981 aactagcaaa ataaattttt tcacctttta aaagcctttt taaagcgaca atcacaggat
     2041 gaaaacgcag taaatatgct acataaatgt gattttttga acttgtgaaa ttttggcttt
     2101 ttttaaataa aggtttttct acgagtatgg ttttatcttt tacaagctca tctaaagttt
     2161 ttaaggtatt aaaatgctct gtggtgatat ttgcgatgat aaaaagatca aattcgttta
     2221 aatcacattc tttcaaagag cgataaattg gagtgttttt aaattcttct tttttagcac
     2281 ttaaagaaag caaacttact tcatgattta aattttttaa ggctaaaaaa tgcttttttc
     2341 ctatgcttcc aaagcctatg attaagactt tcatttaaaa tcctcattgg cttttaaaaa
     2401 ctcatctggc cttccaatgt cgatccaata atcattgatg atataggtat ttaccttacc
     2461 tttttgtaga gcgagtttga tgagttctgg catatctagg tattcatttt tagcaattaa
     2521 atttaaaatt tcattttcaa gtacataaat ccccgcactt actaggaatt tttgtgtagg
     2581 tttttcttct atattttcta taaaaccttg tttttgagtg atcactccat aaggaatttg
     2641 ttgctcaaac tcacgcacgc aaacgctcat taaagctttt gattttttat gcgcttttaa
     2701 aagatcatta aaatcaagct cggttaaaat gtctgcattc ataacgataa aactttcttt
     2761 aaattcttgt tttataaggc ttaaagcccc tgctgtacct agttttttac gctctttaat
     2821 ataagaaatt ttaaccccaa atttttgccc tttttgaaaa taatcttcta tgatttgttt
     2881 tttataattc acacaaaaga taaaattttc aaaattttga tttttaagtc tttggactat
     2941 gctttctaaa ataggttttt tgcctacttt taacataggt tttggagtat ctttagtcag
     3001 ctcttttaag cgagagccta agcctccagc catgatgata atggagtttg gattggcttt
     3061 taaaagtgat gagatagatt ttatagaaag aatttgccct ttttcattta aaacaggaaa
     3121 gtcgtaaata tcggttttag cagaaatttt taaaagctgt tctttgcttg tgttttcttt
     3181 tatggtgatg ggatttttag tgtaaatatc tttgatacta tcttttaaag ttttgccact
     3241 aattaaagct tttctgatgt ttgaatcgct aatgactcct aaaaatttat cctttttatc
     3301 aactataatg cctaatctaa cgcgttcttg cccgactatt tttaaagctt cttttatgct
     3361 agaatcaggg gtgagtttga gtttgtttat atccacacta agccttataa atcgatgaaa
     3421 tttttatgta aaattgtatc taaatttgca ttttttaggc aagtttttat gaatttatta
     3481 ggatttttat cattatcata agggttttta aaatttttta aattttgttt aaattctttg
     3541 ctttctaatt tttcaaaagc ttgatcaaga tcattaattt cacaatcaat gatattttga
     3601 gttcttaaac gccctttttg tctatcgcct atattaatgc aaggagtttt aaaaaaagga
     3661 ctttcactaa taccacttga agaattgcct atcatggttt tggctatttt cataagactt
     3721 aggtattttt gtgagccaag attatcaaaa agtttagcct tgtgtgagtt tttttggcag
     3781 taattttgca aaatttcatt gattaaaagt ccattttcat cggcatttgc tttggtaaaa
     3841 atcaaacttg cgtttttaag ggtgtcaagt tttttaagta aggttttaat ctctttttga
     3901 gtatttttta catttaaggt taaaggatga taagtgatta agtaaagttc tttatctagt
     3961 ttcatttcta aggctttttc taaatctttt ttgtttaaaa aattcatatt ttttatgata
     4021 gtagaagcta aagaacctat attaaaaacc cttttttctt cttctccaag ttgcaaaagc
     4081 ctttttttat aaatttcatg acttacaaaa tgtaaatgcg acatttttga aatgctgtgt
     4141 cttatactat catcaatagc ccctaaagta agctccccgc cacataaatg cactaaaggt
     4201 atgtgcatca aaagacatac acttgctacg ctaagcattt cataacgatc gcctaaaatt
     4261 accaccatat caggttttaa gtcttcaaaa gcatcgctaa aagcactaaa agctaaactc
     4321 atgcttttgc aaaggcttat tttatcatca tttgcaagta ggataggaat tttcttagtg
     4381 attttaaatt ctttttctat ttctttataa gtgagtccaa actcagggct taaatgtgcc
     4441 cctgtagcga tgatttgaag gtttagatct ttatcgtttt gaatttcatg acataaattt
     4501 cttaaaagat accattcagc ccttgttgca ctgactatac aaatttttct tttactcacg
     4561 gataagctca tcttctttgt agtttttagt agcaatttta cctaaaaact cttcatatct
     4621 catagcactt ataccatttg cggggcgttt ggtagtaaga ttttcttcgc taaaaatttc
     4681 tcctttttgg atatcttttt tagcgactaa actttttctt actatgttga tatttttttg
     4741 ttcgctttta cttgcttttt ttatgccatc acccattgcc ttttgtattt gtcttatttg
     4801 ggtgcaaagc atttttagtt cttgaggttc taaacttgct ttatgatcag gccctgacat
     4861 atttttgtct agagtaaaat gcttttctat tacacaagct cccaaggcaa ctgcagctag
     4921 agaaatgtgt atgccttgag tgtgatcaga ataacccaca tcaagcttaa aagcgtcttt
     4981 taagctttgc atggctttaa gattgacttc atcaaaaggg gcagggtatt ctgtagtaca
     5041 gtgtaaaaga gtgatatttt ggcgtttagc gccattttta caaagcacat ttaaagcttc
     5101 ttctacctcg cctaaatttg ccatacctgt tgaaagtatg atttttttat taagctttgc
     5161 aattttttta agatagggta gattggtgat ttctccgctt ggaattttaa agatttttaa
     5221 gcctaactca tttaaaagat ctacactttc aagatcaaaa ggagtagaaa gaaaggcaat
     5281 attgcatttt tttgcgtgta agataagctc tttatgagct ttaagatcga gttcgagttt
     5341 ttgtaccatt tgaagctgac tctcatcact agccgtggtt ttaagctgat agggtgcttt
     5401 tttagccttt gtgctgatac agtttttggc tttaaaactt tgaaatttaa caaaatcagc
     5461 ccctgaatct gctgcgattt ctattaactt tttagctaaa tttaaatcac cattgtgatt
     5521 gactcctgct tctgcaatga tgagggtttt tttcatgttt gttgcctaaa tttagtgtgc
     5581 tttatagtgt ttaaaagcaa gagtcgttcc aaattatttt aaaggatttt ttaatttaaa
     5641 ttctccaaaa tcatttttat aaaataaatc catattgtaa tgtttttcta ctattttcca
     5701 aaatgtagtt ttgctaatac ctatgaaatt acaaaaatct tcaacgcatc tattgtcaag
     5761 cttatgatct cttttttgca caagttcaat agcttctttt ctgcttaaaa gtccataacg
     5821 cacgaaacga gctgcgtaat cactcgcaca agcatgacca aatttagggt atttcatcca
     5881 agcatgtagg atatagccta tactatcaac ttgatcaaaa ttttctgcac acattgttct
     5941 ataccattcg ccttctagat cagtaaaacc acgactttta gcaaaaatat aattgctata
     6001 agaattccat tttataaaat aacttagata aataggatta agtttgttga tatcatttgc
     6061 attgggatta aaaaagagtt gtagattttc ttctttgatt tcatcatcta taaattcatt
     6121 tatatttaaa tcactagcta cgccatttaa aaatatttct ttggcgctag gagtttcttt
     6181 ggcatcacta cctccatatt cataactaac attttctcca taaaccaata aaggtgtatt
     6241 aaattttaaa gccatagcaa aaggatagct gtaaatcagt ctatcaataa accaagtggg
     6301 ttttccatat ttttcaaagg tttttagcat aacttttttt tgagttttga tattaggttt
     6361 taagctaatg atatgacaac caaaagtttc acttaaattt ttaagatttt tcttacctgc
     6421 ttcagtcatg gtgaaattat cttcaacgct aaaaagaata ggattcattc caagtttttc
     6481 tttcatgata tgcacttgaa aatgcgaatc tttacctcca cttacggcaa tagcgcaatc
     6541 atattcaaat tttccattca ttctgcggta tttatcgcat aaggcttcaa gctctttaaa
     6601 tcttgcttta taatcaatat tttctttatt tttatgattg atgcaagctg aacagatatt
     6661 tttaccttct ttatcttttg taaaattaat accaggtcta gtatttggca tcacgcagtg
     6721 atcacaataa atcattcccc accccttcaa tttaataaaa atattagatt gtataaaata
     6781 ttaaattaat atttgcttat tttataaaat atcacttatg tttgttttat ttttctacct
     6841 aaaattcctt tttataaggc ctttttaaag atttttggat ggtaaaaatt ttcatcatct
     6901 tcttttaaat ttttacaaat tttattacaa agttctatgc ctatagtgtc gataatattt
     6961 aacaaatttc ttttttcata aagcaaatca taaactgttt gacattcttt gaaattataa
     7021 tcgtattttt ctataatttt aaaaaatgat gaaatttcat tgaacaaaag caaatttgct
     7081 aaagctcctc gattgccttt actgcaaatg atatgaaatc ctaatttttt aagatctttc
     7141 aatggggtaa atcgttctaa attagaacca caaagtttta ttaatttgat ataaatagta
     7201 ttgaaaaaat gtataaaatc gcagtttaaa tcatccatac tcaaagaact tgaattcgaa
     7261 aaactatatt attatctcta agaatttgca tgatttcttt ttttaaattt aaatcttcat
     7321 ttaagctttc tatagtcaag ctatttttaa gatcttctat atgttggtaa atgtttattt
     7381 ttccggcgtt aaaattagaa aaatctattt ttctttgtag aagttttatt tgtttttcaa
     7441 attcgtatat attgagcttg cttttattat aaacacctat ttcatggcct aacaaataaa
     7501 ataaagcact tatttgctta cccattaaac caaagtctat gatattaatt tctttcattg
     7561 ttttttcctt gttttaatta tatttttatg aaaaataagt tgattggatg tgtagttttg
     7621 ctaataatac tatctgcgct tactatgcag ttatcttcta agtttacgca aggcaacagg
     7681 ctaactctag tagctaaaaa acaatttttt cctatgcttg aatttccatt aagtgtagca
     7741 taagggctta aaatacttcc ttctcctacc ttacaatcat gagctatgct tgaataaata
     7801 ttacaaagca caaaatctcc tatatttgaa ttagcattaa tggttacaaa aggacacact
     7861 ataacccctt gtcctatttt agcttctttt gaaacaaaag attgaggatg tataaaagtg
     7921 ataaaattac atgatttttt tgaaagtttt acaaggattt tttttcttaa attgatttgt
     7981 cctacaccta aagcaaaaga tgctttttga atcaactttt tatcgaagtt atcttcattg
     8041 cctagatatt ttaagtcaaa aaaaatattt tcttgtatat caatatagcc tataatttcg
     8101 taatttgcat cttttaaata agaataaagc tctctagcaa agccacccgc tcctatgatg
     8161 atgacatttt tcacgcactt ctcctaaaag aagaagtaaa aaaatcaaat cccccccccc
     8221 cgctactctc atattttttc ttattaaaat ttttttaatg ctttgaatta aattttgcaa
     8281 cgcatcattc ctttttattt gctattctaa cgctactagg taaattaacc aaacgttttt
     8341 ctaaattttt agtgtttata agctcattgc tttgacagtt ttgaaaagct tttaaactcg
     8401 gtaagctttt ccatatagga cggacgaaaa tattattttt caagcattct tctaaaaaga
     8461 tatttcttaa attttcatct ttaaaaagca aggtattgag ccaaaaattg cttttttcat
     8521 tgcttttttc atcgataaat ttacatttat cgtgattttt aaaaaaatcc ttgtaaattt
     8581 tagcaagttc tcttttgttt tctaaaaaaa gttctaaatt ttcaagtcct gcaagcaaga
     8641 ttgctgcgtt tatattgcaa agacggtaat tataagctat cctatcatga tcgtattcgt
     8701 aaggatgggg gattttagct gtggtgctaa ggtgtcttgc aagtttagct aaattttcat
     8761 catcgcttaa tatcgcccca ccgcatccac ctgtgatgat tttattgcca ttaaaactta
     8821 aaattccaca ctttccaaaa gtgcctaagg ccttgttttc ataggtgctt cctaaggctt
     8881 ctgcggcatc ttcaattaaa aggatgtggt atttttcaca aagctctttg atggctttta
     8941 tatgagcgct taaaccaaag gtgtgcataa taacacaagc tttgatgggt ttgtgtgtgg
     9001 ttttgttata gctaagatta tctttttgat aagtttgatt ttctaaaaaa tgctctaaag
     9061 ccttaggact taaacttaga gtgttttcat ctatatctaa aaaaacgggt tttgcacctg
     9121 tataagtgat agcattggcc gtagcgacaa agcttatgct ttgagtgatg acttcgcagt
     9181 tttcatcgat gccattagct agtaaagcga tatgaagagc tgctgtgcct gtatttgtag
     9241 cgatgacaaa gcgtgctttg gttttttctt ttaaagcttc ttcaaaacgc gttacaaatt
     9301 ctcctacgct tgaaacaaaa ccgttatcga tacattctaa gagatatttt ttctcattgc
     9361 ctataaagca aggctcatgt aaggcgatat tttcttgatt aaaaagactt tttataaaag
     9421 aaatttcttt ttcaaacatt ataaagctca cttttataat tttctaaatt ttctttaaaa
     9481 tactctatgc tttgtctcaa gccttcttct agacttattt tgctttgcca atttgtagct
     9541 tttttaagct tgtttgcatc gcaacaaagt ctaaaaactt cgctattttt aggacgcaat
     9601 ctttgttcat cttggatgat ttttacttta gaatctaaaa ttttttgtat gagatcaagt
     9661 acttcttgca tggagtattc cactcctgag cctatattat aaacttctcc aaaatgtttt
     9721 aaatttaaaa gagagataaa accctcgcaa gtatctagca caaaatttaa atccctttta
     9781 gggcttaaat ctcctagttt gatttccttt gctccactta aaatttgtgt gatgatggta
     9841 ggtatgatag cccttgcgct ttgtcttggt ccataggtgt taaaagggcg tgcaatattg
     9901 acatttaaat taaaagaatt ataataactc agcgccatca tatctgcagc gattttgctt
     9961 gcagaataag ggctttgagg ttgtaaaggg tgtttttcat cgataggtac ataaaaggct
    10021 gtgccataaa cttcgcttgt tgaggtgtgg ataaaatgtg aaatctcgtt ttttttagct
    10081 gcttcgagca tatttaaagt gccattgaca ttggtatcca catagctttg tggggctgtg
    10141 taggagtagg ggatagcgat taaagcgcca agatgaaaga tcgcatctat atttttggtg
    10201 attttttcgc aaaaaaaact gtctcttaaa tctccactta taacctccat gtcttttaaa
    10261 aaagaacttt tttctaaatg tccccaaaaa ttaaaagaat tatactgact taaagctctg
    10321 actttaaaac cttttttgac caaactttca caaagatgag aacctataaa accatcagca
    10381 cctgtaacta aaatatttct cacctt
//
LOCUS       DAPWGO010000059        10329 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.060, whole genome shotgun sequence.
ACCESSION   DAPWGO010000059 DAPWGO010000000
VERSION     DAPWGO010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10329
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.060"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(78..635)
                     /locus_tag="RJ336_001271"
     CDS             complement(78..635)
                     /locus_tag="RJ336_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HDZ5213720.1"
                     /translation="MKYQLRFGGEGGQGVITAGEILAEAAIKEGRQAFKASTYTSQVR
                     GGPTKVDIIIDDKEILFPYAVEGEVDFMLSTADKGYKGFRGGVKEGGIIVVEPNLVHP
                     ESEDYKKWQIFEIPIITIAKDEVGNVATQSVVALAIAAYMSKCIDLDVLKETMLHMVP
                     AKTRDANAKAFDLGVKYATQAKPYS"
     gene            complement(632..1477)
                     /locus_tag="RJ336_001272"
     CDS             complement(632..1477)
                     /locus_tag="RJ336_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HDZ5213721.1"
                     /translation="MAFNYDEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDD
                     VCLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIG
                     GNHTIHGCRRNIDLTHIVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACEL
                     TKAAGASFVARGNVIEANKLENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAM
                     LDWIKNRVVDKAKFESMDFEERKDKFPTGILHEDNSQPEYCHAYEEVRRAAKEKRMVD
                     LGALK"
     gene            complement(1478..2602)
                     /locus_tag="RJ336_001273"
     CDS             complement(1478..2602)
                     /locus_tag="RJ336_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate synthase subunit alpha"
                     /protein_id="HDZ5213722.1"
                     /translation="MREVIATGNVLIAKAAIDCGCKFFGGYPITPSSEIAHELSHMLP
                     ANDGTFIQMEDEISGISVAIGAAMSGVKSMTASSGPGISLKAEQIGLAFIAEIPLVIV
                     NVMRGGPSTGLPTRVAQGDLFQAKAPTHGDFASIAIAPASLEEAYTETIRAFNLAEKY
                     MTPVFLLMDETVGHMNGKAVLPDLKDIKVYNRKKFEGDKKDYKPYAAGENEPATLNPF
                     FTGYRYHVTGLHHGDIGFPTEDGVIVKKNMERLIGKIKNNQEDICTYEEYMLDDAEFL
                     IIAYGSVSRSAKEAIQRLREQGIKVGLFRPITLYPVAEKKIAEVVSKFKKVMVSELNM
                     GQYLEEIERVTSRRDFISLHRANGRPITPSEIIAKVKENI"
     gene            complement(2611..2922)
                     /locus_tag="RJ336_001274"
     CDS             complement(2611..2922)
                     /locus_tag="RJ336_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDZ5213723.1"
                     /translation="MSMTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLG
                     QMIEVVHPESCIGCTECEIHCPDFAIMVAKRDEFKFAKLTAEAKDRAVAVKNNKYKKL
                     A"
     gene            complement(2937..3806)
                     /gene="sucD"
                     /locus_tag="RJ336_001275"
     CDS             complement(2937..3806)
                     /gene="sucD"
                     /locus_tag="RJ336_001275"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDZ5213724.1"
                     /translation="MSILVNKNTKVIVQGFTGKEATFHAEQCMAYGTNIVGGITPHKG
                     GQTHLGKPVFDTVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPV
                     KDMMFAKQYANKKGMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYE
                     AANQVVQGGYGISTAVGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEA
                     AKFIKENISKPVVAFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDS
                     PALIGEEIQKILG"
     gene            complement(3816..4979)
                     /gene="sucC"
                     /locus_tag="RJ336_001276"
     CDS             complement(3816..4979)
                     /gene="sucC"
                     /locus_tag="RJ336_001276"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDZ5213725.1"
                     /translation="MNIHEYQAKAIFADNGILTLKGKVAFSVDEAVSNAKELGGSVWA
                     VKAQIHAGGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGA
                     NIVKEYYLAILFNRMAEQITLIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHG
                     LEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSF
                     DDSALYRHPEIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDII
                     NYSGAKPANFLDVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILE
                     ATKNVEVNIPIVVRLDGTNAAEAKAILDNSNLKNIKAATNLKNGAELVKSLVG"
     gene            complement(4980..5882)
                     /locus_tag="RJ336_001277"
     CDS             complement(4980..5882)
                     /locus_tag="RJ336_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDZ5213726.1"
                     /translation="MKITVIGAGNVGSSVAYALILREIANEIVLVDINEDLLYAKELE
                     LTQSIAALNLNIDLLCTKDYTHTKNSDIVLFSAGFARKDGQSREELLQLNTSIMLDCA
                     KKIKDFTEDPLFIILTNPVDFLLNTLYESGIFSSKKIIAMAGVLDNARFKYELAKKLN
                     VKMSSVDTRLIGFHNDDMVLVKSYASVKNKNISEFLNEEEFDDLENEVKTGGAKVIKH
                     LKTSAYLAPASACIRMIESIRSGEFLPMSVILHGEFGVQNKALGVMARLGLEGVIEIM
                     KMDLSSQEKDKLEKSLIKYQYKGE"
     gene            complement(5879..8083)
                     /locus_tag="RJ336_001278"
     CDS             complement(5879..8083)
                     /locus_tag="RJ336_001278"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDZ5213727.1"
                     /translation="MQITYTLTDESPALATYSFLPIVKAFLSRAHIGVKTSDISLSGR
                     ILATFSEYLKEEQRCEDALELLGELVKRSDANLIKTPNISASIPQLKAAIKELQDKGY
                     MLPNYPDEPKNDEELQIKTKYQKVLGSAVNPVLRQGNSDRRSTKAVKDYAKNNPYRVV
                     EFNPNSKTRVSYMKEGDFFSNEKAVLIDQDCVANIEFTSVDGKKEILKEGLKLEKNEI
                     LDATFMDVQKLQEFYAKEIKASKDDDVLFSLHLKATMMKVSDPILFGYAVKVFFKELF
                     IEFQDEFEKLGINPNNGLSELLSKIENSSKKDEILKKYSEILAKSADISMVNSDKGIT
                     NLHVPSDVIVDASMPAMLKNGARLWDKEGKEKDTNAVIPDQTYATIYEAVIEDLHKNG
                     TLNPSKLGSVSNVGLMAKKAQEYGSHDKTFVAKEEGTFKIVSNGKVLLEHKVRKGDIY
                     RANQAKFDAVLNWIDLGIERSELSGAEAIFWLDSKRASNKIMITLVQNRLKEKGKNVA
                     ILTPKEACLRSLELIREGKDVISITGNVLRDYLTDLFPILELGTSAKMLSVVPMLNGG
                     AMFETGAGGSAPKQVEQLVEENHLRWDSLGEFLALQASLEFYANKCGNHKAKVLAECL
                     DEAIGEWLENNKAPSRKVKEDDNRTSHFYLAMYFANHLARQASDMELQSFFKDIALEL
                     SSNEEKIRAEFNDAQGVKVDLGGYYKFDDEKANKIMRPSATFNAILEKIGQR"
     gene            complement(8200..>10329)
                     /locus_tag="RJ336_001279"
     CDS             complement(8200..>10329)
                     /locus_tag="RJ336_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal domain-containing protein"
                     /protein_id="HDZ5213728.1"
                     /translation="LKDYDLNIDGNLSINTKSEFYYFQGRASGELLDFNASISYKDKN
                     LAYKIEDLNIRNITEIFKRVNKRIELPQSLNLWVAYRAKGEFYHLDYLQGFIDFTKDN
                     YYLDNISASGYVNNVKVRLDDKMNAIEIPKLDLNLNKQKLDFVFNKAFYNGADLSSSK
                     VYLYDLFDEKKVGIYLRIKSDNLKFDEKLAKALEDYHFSLPFYQKSGKIKSDLELKID
                     FHDKGEISYSGILALENASISLADFNITKAFVKLNQNDLNIENASVKNGFLEADFNAK
                     FDLQKQQGNFNTQISRLYFDNGELLDLKNQNVEVKLDYSQNVNISIPQWNLILNFKDG
                     LEANLNNPKILFSFSPLLKKLGFINAKNVYYKTLNFEDFNASVNDAYFKNNLLINGQT
                     PYENDSFDIVKNKGIMEIHTQSDTASAKISSDNKEIHLKNLSYIYRKHSNSSNSTFDI
                     ATNTQNISFGGANVALILADSNKTLAFDRVEADLKGNALDLKGSRGNAKFDLYYSSND
                     LNLNVSNIDDNYLNEFLQKQAVQDGVFNLSIKGSGLEYFDGQIDFKNTYVKDLKGINQ
                     LISFIDTVPSLLMFKSPTFNQKGLSLHDGKIIFNRKKDLLSVSAINLNGDSVDIYGLG
                     SANLRLNTVDFSLELKTLKSASEAISKVPILNYVILGKNQEISTNLKIDGSIDDPKFH
                     TEILTDTLKTPFNLIKNIIQLPANLLN"
BASE COUNT         3266 a         2076 c         1287 g         3700 t
ORIGIN      
        1 ttaaaataat taaaatttaa attttatttg caatgtgtaa aattttagaa gttaaattcc
       61 gcatgatgcg gaatttatta tgaatatggt tttgcttgag tggcgtattt tacacccaga
      121 tcaaaagctt tagcatttgc atcacgagtt tttgcaggaa ccatatgaag catagtttct
      181 tttaaaacat ctaaatctat acatttgctc atataagcag caattgcaag tgcaacaact
      241 gattgagtag ctacatttcc tacctcatct ttagctatgg tgataatagg gatttcaaaa
      301 atttgccatt ttttataatc ttcactttca ggatgtacta aatttggctc tacaactata
      361 atacctcctt cttttacacc cccacgaaaa cctttataac ccttatctgc agtcgaaagc
      421 ataaaatcta cttccccttc tacagcataa ggaaataaaa tttctttatc atcaatgata
      481 atatccacct tagtagggcc accacgcact tgtgaagtgt aagtagaagc cttaaaagct
      541 tgacgacctt ctttaatggc tgcttctgct aaaatttctc ctgcggtgat aacaccttgt
      601 ccgccttcac cgccaaatct taattgatat ttcattttaa agctcctaaa tccaccattc
      661 ttttttcttt ggctgcacga cgtacttctt cataagcgtg gcagtattct ggctgagaat
      721 tatcttcatg taaaattcct gttggaaatt tatcttttct ttcttcaaaa tccatgcttt
      781 caaatttagc tttatccaca acgcgatttt taatccaatc aagcatagct acagcttcgc
      841 ccattttgtt ttttctgcct agattgatat gacaatttga aaaaacatct acaaaactat
      901 aacccttatg cgctaaagcc ttataaatta aattttcaag cttattagct tcgatcacat
      961 taccccttgc cacaaaagaa gctcctgcag ctttagttaa ttcacacgca tcaaaattag
     1021 ggtcaatatt tccaaattga gctgttactg tataaaaacc ttttggagtg gttgggcttg
     1081 tttgggaatt cgtaagtcca tagatgaaat tattgattac aatatgtgtt aaatcaatat
     1141 ttctgcgaca accatgtata gtatgatttc caccaattgc caaagtatcc ccatctccac
     1201 ttactacaat aacatgttta ctaggattgg ctagtttaat gcctgttgca taagctattg
     1261 ctctaccatg agtagtatga actgtattac aatttacata agaactcatt ctgccactac
     1321 aacctatacc cgaaacaaga caaacatcat ccatattcca accaagtttt tctatcgcgc
     1381 ggataataca ttttaaaaca acaccatcgc cacatcccca acaccattga gtaggcattt
     1441 tatctactct tagatattca tcataattaa aagccattta tatattctcc tttaccttag
     1501 caataatttc acttggagtg ataggacgac catttgcacg gtgcaaacta ataaaatcgc
     1561 gacgcgaagt tactctttca atctcttcaa gatattgtcc catattaagc tcgcttacca
     1621 tgactttttt aaatttgctt acaacctcag caattttttt ctcagccact ggataaagag
     1681 taattggacg gaaaagtccc actttaatcc cttgctctct taatctttgt atagcttctt
     1741 ttgctgaacg actcacgctt ccataagcaa tgattaaaaa ttcagcatca tcaagcatat
     1801 actcttcata agtacaaata tcttcttgat tgttttttat tttacctatg agtctttcca
     1861 tatttttttt cactataact ccatcttcag ttggaaaacc tatatctcca tgatgaagtc
     1921 ctgtaacatg ataacgataa cctgtaaaga aaggatttaa agttgcaggc tcattttctc
     1981 ctgctgcata aggtttataa tcctttttat cgccttcaaa ttttttacgg ttatatactt
     2041 taatatcttt taaatcaggt aaaaccgctt taccattcat gtgccctaca gtttcatcca
     2101 taagtaaaaa tactggagtc atatattttt cagctaaatt aaacgctcta atggtttctg
     2161 tataagcttc ttcaagactt gcaggagcaa tagcaatact tgcaaaatcc ccatgagttg
     2221 gtgctttagc ttgaaacaaa tctccttgtg ctacacgagt tggaagacct gttgaaggac
     2281 cacctctcat aacatttaca atcacaagtg gaatttcagc aataaatgca agtcctattt
     2341 gctctgcttt taaagaaatt ccaggaccgc tacttgcagt catggatttt accccactca
     2401 ttgccgcacc aatagccacg ctaatacctg aaatttcatc ttccatttgt ataaaagttc
     2461 catcatttgc aggaagcata tggcttaatt catgagctat ctcactacta ggagtaatag
     2521 gataacctcc aaaaaattta catccacaat caatcgcagc tttggcgatt aaaacattac
     2581 ctgttgctat aacttctctc attatttttc ctatgctaat tttttgtatt tgttattttt
     2641 tacggctaca gctctatctt tagcctcagc agtaagtttg gcaaatttaa attcatctct
     2701 ttttgccacc ataatagcaa aatcagggca atgtatctca cactcggtac agcctataca
     2761 ggattcaggg tgtaccacct ctatcatttg tcctaaaacc gcatgcacat catcgcgcat
     2821 agctaaaacc ccagcggggc aatagctaac acaaatatta catgctttac atctatgctc
     2881 atctacccaa acaggggtat cttttggagc tgtcatactc atgttttttt cctttattaa
     2941 cctaatattt tttgaatttc ttcaccaatt aaagccggag aatccaccac atgaattcca
     3001 tagcttttta aagcttcttt tttagctgca gcactttcat cagcacttcc tactatggca
     3061 cctgcatgcc ccattctttt gcctttagga gcagttgcac ctgcaatgaa tgctaccaca
     3121 ggtttgctaa tattttcttt aataaattta gccgcttcca cttccaaact accaccaatt
     3181 tcacctatca ttacaatagc tttagtttca tcatcttttt ggaattcact taaaagttct
     3241 ttataagcaa gacctatgat aggatcacca ccaattccta ctgcagtaga aattccataa
     3301 ccaccttgaa ctacctgatt agcagcttca taagttaaag ttccactttt tgaaataagc
     3361 cccacgcaac cttttttaaa aataaaacct ggcataatac ctaacttaca ttcttcagaa
     3421 gtgataatac ctggacaatt tggtccaatg attttcatac cctttttatt agcatattgc
     3481 ttagcaaaca tcatatcctt tacaggcgta tgctcggtga ttacaactgc aagcttaata
     3541 cccgcatcag ctgcttcaat cacgctatca cctacagcaa aagcaggtac aaagatcaag
     3601 ctcacgtcag cctttgttgc tttaaccgca tctgcaacgg tatcaaaaac tggtttacct
     3661 aaatgagttt gtccaccttt atgaggagtg atgcctccga ctatatttgt accataagcc
     3721 atgcattgct cggcatgaaa agttgcttct ttacctgtaa aaccttgaac tattactttt
     3781 gtatttttat taaccaatat actcattttc tatccttatc ctactaaact ttttacaagc
     3841 tctgcaccgt ttttaagatt ggttgctgct ttgatatttt taagatttga attatccaaa
     3901 attgcctttg cttccgctgc gttagtgcca tctagacgca ctacaattgg aatatttacc
     3961 tcaacattct tagtagcttc taaaattccg tttgctatcc tatcacaacg aacaatacca
     4021 ccaaagatat tgataaatat aacttttaca tttttatctc ttaaaatgat ttcaaaagcc
     4081 tttgcaacag tttcaggtga agctcctcca cctacatcta agaagtttgc aggttttgca
     4141 ccgctataat taataatatc catagttgcc attgctagac ccgcgccatt taccatacaa
     4201 gctacatctc catctaattt cacatagctt aagccaaatt cagccgcttc tctttcagca
     4261 ggattttctt cggtaatatc tctaagttca gcaatttcag gatgacgata aagcgcacta
     4321 tcatcaaaac tgcattttgc atcaagggca taaaaatccc cttctgcagt tttaatcaaa
     4381 ggattgattt caagcatatt catatcttta tccatataaa gcttataaag tttagctatc
     4441 atggaaatga gttttttacc ttcatcttta tcaagtccta aaactctcgc tacttcaagt
     4501 ccatgaaaca ttttaaaacc gatttgtgga tcaatgccta cttttgcaat tttctcagga
     4561 ctttctttgg ctactttttc tatatccatc cctccttcac ttgaagcgat aagggtaatt
     4621 tgctctgcca ttctattaaa taaaatagcc aaataatact cttttactat attagcacca
     4681 ctttctatat aaagtttttg cacgagcttg ccttcaggtc ctgtttgatg agttactaaa
     4741 ttcattccta aaattttact cgcgtaatct tttacctcat ctaaattctt agcgatttta
     4801 acaccaccac caagaccacg acctcctgcg tgaatttgag ctttaaccgc ccaaacacta
     4861 ccacctaatt ctttagcatt agacacagct tcatctacgc taaatgcgac ttttcccttt
     4921 aaagtaagga tgccattgtc cgcaaaaatt gcttttgctt gatactcatg tatgttcatt
     4981 tattctcctt tatattgata cttgattaaa gatttttcca atttgtcttt ttcttgtgaa
     5041 ctaagatcca ttttcatgat ttcaatcaca ccttcaagtc ctaatcttgc catcactcct
     5101 aaggctttgt tttgcacccc aaattctcca tgtaaaatca cactcatagg taaaaactcg
     5161 ccacttctta tagactcaat cattcttatg caagcactag caggagctaa ataagctgaa
     5221 gttttaagat gtttgattac tttagctcca cctgttttaa cttcattttc caaatcatca
     5281 aattcttctt catttaaaaa ttcgcttata tttttatttt taacactcgc ataagatttt
     5341 accaaaacca tatcatcatt atgaaaacca ataagtcttg tatctacact tgacattttg
     5401 acattaagtt ttttggcaag ctcgtattta aatcttgcat tatctaaaac tcctgccatg
     5461 gctataattt tctttgatga aaaaatcccg ctttcataaa gagtattaag tagaaaatcc
     5521 acaggattag ttaaaataat aaaaagcgga tcttctgtaa aatctttgat tttcttagca
     5581 caatcaagca taatgcttgt atttaactga agcaattctt ctctactttg cccatctttt
     5641 ctagcaaaac ctgcactaaa aagcactata tctgaatttt tggtatgagt ataatcttta
     5701 gtgcaaagta aatctatatt taaatttaaa gcagctatgc tttgagtaag ctctagttct
     5761 tttgcgtaaa gcaaatcctc gttaatatct actaaaacaa tttcatttgc tatttctctt
     5821 aaaatcaaag cataagctac gcttgaacct acattgccag cccctataac agtgattttc
     5881 atctttgtcc tattttttct aaaatagcgt taaaagttgc acttggacgc atgattttat
     5941 ttgctttttc atcatcaaat ttataatacc cacccaaatc cactttcaca ccttgtgcat
     6001 cgttaaattc ggctctgatt ttttcttcat tagaagaaag ctctagggca atatctttaa
     6061 aaaagctttg aagctccata tcacttgcct gtcttgctaa atgatttgca aaatacattg
     6121 ctaaataaaa atgacttgtt ctattatcat cttctttgac ttttcttgat ggagctttat
     6181 tattttcaag ccattcgcct atagcctcat caagacattc tgctaaaacc ttagctttat
     6241 gattgccaca cttatttgca taaaattcca aacttgcttg caaagccaaa aattcaccca
     6301 aactatccca acgcagatga ttttcttcga ctaattgttc tacttgttta ggtgctgaac
     6361 cccctgctcc tgtttcaaac atagctccac catttaacat aggcacaaca gaaagcattt
     6421 ttgcacttgt tccaagctct aaaataggaa aaagatcggt taaataatcc cttaaaacat
     6481 tacccgtgat agaaataaca tctttacctt ctcggattaa ctctaaactt cttaaacaag
     6541 cttcttttgg agttaaaatg gctacatttt tacccttttc ttttaaacga ttttgtacca
     6601 aagttatcat gattttatta ctagctcttt tgctatctaa ccaaaaaata gcttcggctc
     6661 cactaagttc tgatctttct atacctaaat caatccaatt taacactgca tcaaatttag
     6721 cctgattagc tctataaata tcaccttttc taaccttatg ttctaataaa actttaccgt
     6781 tagaaactat tttaaaagtt ccttcttctt tagccacaaa ggttttatcg tgcgatccat
     6841 attcttgagc ttttttagcc attaaaccta cattagatac actgccaagt tttgaaggat
     6901 ttaaagtacc atttttatgc aaatcttcaa taaccgcctc ataaatagtt gcgtaagttt
     6961 gatcaggaat tacggcattt gtgtcctttt ccttaccttc cttatcccac aatcttgcgc
     7021 catttttaag cattgcaggc atagaagcat caacgataac atcgcttgga acatgaagat
     7081 ttgtaatgcc tttatctgaa tttaccatag aaatatctgc agatttagct aaaatttcac
     7141 tgtatttttt taaaatttca tcttttttgc ttgaattttc gatcttactt aaaagctcac
     7201 ttaaaccatt atttggatta atgcctaatt tttcaaattc atcttgaaat tcgataaata
     7261 attctttaaa aaatactttt accgcataac caaaaagtat aggatcactt actttcatca
     7321 ttgtagcttt taaatgcaaa gaaaaaagca catcatcatc tttgcttgct ttaatttctt
     7381 ttgcataaaa ttcctgaagt ttttgcacat ccataaaagt agcgtctaaa atttcatttt
     7441 tttcaagttt taagccctct tttaaaattt cttttttacc atcaacgctt gtaaattcta
     7501 tattagccac acaatcttga tcgattaaaa ccgctttttc attagagaaa aaatcccctt
     7561 ctttcatgta agaaacacga gtttttgagt ttggattaaa ctcaaccaca cgataaggat
     7621 tgttttttgc atagtctttt accgcttttg ttgaacgacg atctgaattt ccttgtctta
     7681 atacaggatt aaccgctgaa cctaaaactt tttgatattt tgttttaatt tgcaattctt
     7741 catcattttt tggctcatct gggtaatttg gtaacatata acccttatct tgcaattctt
     7801 taatcgccgc cttaagctga ggaatagaag ctgaaatatt tggggtttta ataagatttg
     7861 catccgatct tttgacaagc tcgcctaaaa gctctaaagc atcttcacat ctttgttcct
     7921 cttttaaata ctcactaaaa gtagctaaaa tccttccaga caaagaaata tccgaggttt
     7981 ttactcctat atgtgcccta cttaaaaaag ctttcactat aggcaaaaac gaataagtcg
     8041 caagagctgg cgactcatct gttaaggtat aagtaatttg catttttagt cctttaaaat
     8101 acttattttt attttcattt ttaagtatat tacaaataaa aaaaaatgca agagtaagtt
     8161 taaagtttgt tttagttttc aaacaaactt taaatatttt taattaagta aattagcagg
     8221 aagttgtatg atatttttaa taagattaaa aggggttttt agggtatctg ttaaaatttc
     8281 ggtatgaaat ttagggtcat ctatgcttcc atctattttt aagtttgtgc taatttcttg
     8341 atttttacct aaaattacat aatttaaaat tggaaccttg gatatagctt ctgaagctga
     8401 ttttaaagtt ttaagctcta aactaaaatc cactgtattt aatcttaaat ttgctgatcc
     8461 taaaccatat atatctacac tatcaccatt taaattaata gccgaaacac ttaaaagatc
     8521 tttttttcta ttaaaaataa tctttccatc atgtaagctt aaaccttttt gattaaaagt
     8581 tggagattta aacatcaata aacttggtac agtatcgata aaggaaataa gctgatttat
     8641 accttttaaa tccttcacat aagtattttt aaaatcgatc tgtccatcaa aatactccaa
     8701 tccacttcct tttatactta agttaaacac tccatcttga acagcttgtt tttgtaaaaa
     8761 ctcatttaaa taattatcat caatattgct aacgtttaaa tttaaatcat tagaagaata
     8821 ataaagatca aattttgcat ttcctctaga acctttaaga tctaaagcat tgccttttaa
     8881 atcagcttct actctatcaa aagccaaagt tttattagaa tctgccaaaa ttaaagctac
     8941 atttgctcca ccaaaactaa tattttgggt attagtagca atatcaaatg ttgaatttga
     9001 agagttggaa tgttttctat aaatataact taaatttttt aaatgaattt ctttattatc
     9061 agaacttatt ttagcacttg ctgtatcact ttgagtatga atttccataa tgcccttatt
     9121 ttttacaata tcaaagctat cattttcata aggagtttga ccgttgataa gtaaattatt
     9181 tttaaaataa gcatcattaa cacttgcatt aaaatcttca aaatttaaag ttttataata
     9241 aacattttta gcattgataa acccaagctt tttaagtaat ggagaaaatg aaaataaaat
     9301 cttaggatta ttaagattag cctcaagtcc atctttaaaa tttaaaatca aattccactg
     9361 aggaatgcta atgttaacat tttgcgaata atctaatttt acttctacat tttgattttt
     9421 taaatctaaa agctccccat tgtcaaaata aagccttgaa atctgagtat tgaaatttcc
     9481 ttgctgtttt tgtaagtcaa atttagcatt aaaatcagct tctaaaaagc catttttaac
     9541 actggcattt tctatattta aatcattttg atttaatttt acaaatgctt ttgtaatatt
     9601 aaaatcagcc aaagaaatac tagcattctc taaagctaaa ataccactat aagaaatttc
     9661 acccttatca tgaaaatcaa ttttaagctc caaatcactt ttaatttttc cgcttttttg
     9721 ataaaaaggt agtgaaaaat gataatcctc taaagcttta gcaagttttt cgtcaaattt
     9781 tagattatca gacttaatgc gcaaataaat cccaactttt ttttcatcaa acaaatcata
     9841 tagataaacc ttactagaac ttaaatcagc accattatag aaagctttat taaagacaaa
     9901 atcgagcttt tgtttgttta aatttaaatc gagttttgga atttcaatag cattcatttt
     9961 atcatccaag cgaactttga cattattaac ataacctgat gcactaatat tgtctaaata
    10021 ataattatct ttagtaaaat ctataaagcc ctgcaaataa tctaaatgat aaaattctcc
    10081 cttagcccta tatgctaccc aaagatttaa actctgcgga agttctattc ttttattaac
    10141 tcttttaaaa atttccgtaa tatttctaat gtttaaatct tctattttat aagctaaatt
    10201 tttatctttg taagagatac ttgcgttaaa gtcaagcaat tctccacttg ctctaccttg
    10261 aaaataataa aactcactct tagtattgat acttaaattt ccatcaatat ttaaatcata
    10321 atcttttaa
//
LOCUS       DAPWGO010000060         9565 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.061, whole genome shotgun sequence.
ACCESSION   DAPWGO010000060 DAPWGO010000000
VERSION     DAPWGO010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9565
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.061"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            7..945
                     /gene="rsmH"
                     /locus_tag="RJ336_001280"
     CDS             7..945
                     /gene="rsmH"
                     /locus_tag="RJ336_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDZ5213729.1"
                     /translation="MILEIPHIPVLLNEVQEIFKNLKTGYFLDCTLGFGGHSEALLKN
                     HPDLKFIACDQDQQALEFSKKRLKDFHNRITFIQSNFSEVLEKISYKEELRGILADIG
                     VSSFQLDNNERGFSVNSDFLDMRMNQNSKISAYEIINTYTKEQLTSIFKDYGELHDAH
                     FIAEKICLERSKNPIKSAKELYQIIGKGKQNHRKISKATLAFQAIRIEVNQELKVLKD
                     FLGHLENLKPKNCILAIISFHSLEDRIVKNFFKKWSKNCICDEKIMRCECGNNHSLGQ
                     IITKKAISASKEELLKNSRSSCAKMRAFYFNNLDNK"
     gene            945..1883
                     /locus_tag="RJ336_001281"
     CDS             945..1883
                     /locus_tag="RJ336_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213730.1"
                     /translation="MLEDDFIKERQNIRQKMLKFSRAINQGKPLDDDLRDEISSDDIL
                     RRRFKKKTPNKFLEELDEEYESKHTKKSNIYLKEDLINVKLEEKQSLAKKFFSKMKER
                     KKEENKKTKKIFSFGRKKINKIKNIQTKPKIQTKNDQNPIQDKKEKKESIKSIEKIQK
                     TEPKIQNSQTIEKRPDIKKQPDIKQSLENLQKKITPQENKQELPKPSNQAQEKQQNDE
                     DAQKAKNVLLEGFSNATKEDRNLNFNHLLFAALLVSFALFLFAPQIYIRNQIYYLSRE
                     IATLRTEESVLNEENKDLKRRLENMRFQNQILDYLE"
     gene            complement(1871..2362)
                     /locus_tag="RJ336_001282"
     CDS             complement(1871..2362)
                     /locus_tag="RJ336_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213731.1"
                     /translation="MKKFKEFSLRFLFKVSEQPVLVKDLLEANALFNDGMLVDPSKLN
                     FNFKILNSYIYFGVFCAVVLLPLLLITHYFLTKLDFHISIVSAVMVTACVFIGYDIFK
                     VYTRKIISKKIIQKAWALHFPYFAYEKYSIMAGEIYKEALKEEIPKANLEQYVLDKII
                     HSK"
     gene            complement(2433..3620)
                     /locus_tag="RJ336_001283"
     CDS             complement(2433..3620)
                     /locus_tag="RJ336_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDZ5213732.1"
                     /translation="MKILVLNSGSSSIKFKFFDNKVVKASGLVEKIGEQNSKVILKNV
                     LNNESFERELMINNHEEGLSIVNELFKESGILADLNALDGCGHRIVHGGRNLSEHCLV
                     DDYVLKEIDRVSIFAPLHNPAHLAGIKTMIKAAPSVANVAIFDTAFHRTMPDFAYMYA
                     LPYDFYDKHNIRRYGFHGTSHAFVSSRAASLLEKDKSELNVISAHLGNGASVCAIEKG
                     KSVDTSMGFTPLEGLVMGTRCGDLDPAILPFISHLKGLTIEEIDTLMNKKSGVYGICG
                     YNDFRDIEREIEQGNDKARLALDMFCYRLVKYIGSYFAVLPKTDAIIFTGGIGENDSL
                     VRQKVCERLAHLGIELDFELNKQRISGERMINHANSKVKVLVIPTDEELEIARITEEL
                     ISN"
     gene            complement(3634..5139)
                     /gene="pta"
                     /locus_tag="RJ336_001284"
     CDS             complement(3634..5139)
                     /gene="pta"
                     /locus_tag="RJ336_001284"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDZ5213733.1"
                     /translation="MMANLYLMRSRSDELNTIISTNLLKNYSKIYKNIAIYCPVIYIH
                     RVPVLQGWLEEFNINQTVKSAYGFTFREAMEEFSKDPHNFFNVILEEYEELKRKYDFV
                     LVNSFCEFGILDGFDLSIKLAKNLNTPIAAIINDEDKLIAQKYFDHALDGRNYVLINE
                     NFNFEEVQKLEEYDFITPHRFKYELIKQSVKNKKTVVLPESNDERILKAAEILLKSKV
                     VDLILLGDEEKIKQDAARLSLDLSTIQIMNPLNSEYNQEFTSILYEARKSKGMSLEEA
                     KMLVQDKTYFGTLLIHTGKADAMVSGASTTTAETIRPALQLIKTKEGISSVSGIFFMG
                     LEDQVLAFADCAVNPSPTAEQLATSAYVSAMTAKSFGLEPRIALLSYSSGDSGKGESV
                     DLVKEALKIAKEKYPELNIDGPMQFDCAYDPKTAAKKMPNSKIAGHANVYIFPDLNAA
                     NICYKAVQRTANALAIGPILQGLKKPVNDLSRGCLVDDIVDTVILSAIQAQ"
     gene            5229..5927
                     /gene="flgH"
                     /locus_tag="RJ336_001285"
     CDS             5229..5927
                     /gene="flgH"
                     /locus_tag="RJ336_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HDZ5213734.1"
                     /translation="MKKVLFYVLPFAFFGCSATVDPQISMKPPAYVEELAPKQSNNVE
                     SAPGSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGAL
                     TGSSGVVANALNKVNAYSNIGFQTNSSNNYTGTGSQSRNESFNTTISTRVIKILSNGN
                     YFIEGSRELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTR
                     KPWGSKVIEAIWPF"
     gene            complement(5957..7030)
                     /gene="ispG"
                     /locus_tag="RJ336_001286"
                     /gene_synonym="gcpE"
     CDS             complement(5957..7030)
                     /gene="ispG"
                     /locus_tag="RJ336_001286"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDZ5213735.1"
                     /translation="MEYKRFKTRQIKVGNVLIGGDAPISVQSMLFTKTRDIEGSLEQI
                     NRLYFAGANIVRLACLDMADARALKEIKAKSPLPLIVDIHFNHNLAVYCAEFIDGVRI
                     NPGNIGSKENIKEVVKACKERGIPIRIGVNHGSIEKQFSDKFGYGVDAMLESAMYNIK
                     LLEDLDFFDIKISMKTSDAQKTIEAYERLRPLCDYPFHLGVTEAGTKFHSTVKSSIAL
                     GNLLLKGIGDTMRVSMTGELEEEIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLLS
                     AIKIVEEKTKHIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQGLVIRHGEVVAKLK
                     ESELVDRFLAEVEDEVKSRAVKE"
     gene            7153..7677
                     /locus_tag="RJ336_001287"
     CDS             7153..7677
                     /locus_tag="RJ336_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HDZ5213736.1"
                     /translation="MDFFKNGGVIWITGLAGSGKSYIAEALYKKLKEKYNNIIYLDGD
                     ELRDLLEHYGYDKQSRIDMSIKRSKFAHFLSSQNMLVIVSAISMWNEIYEHNKKTLKN
                     YFEIYIKCDFEELKKRDKKNLYSKNLKGEISNVVGMDIDFDEPKSNLIIDNTYMTELD
                     NKISYILTALKEKK"
     gene            7688..9078
                     /locus_tag="RJ336_001288"
                     /pseudo
     CDS             7688..9078
                     /locus_tag="RJ336_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006677.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
BASE COUNT         3591 a         1572 c         1237 g         3165 t
ORIGIN      
        1 ttaggattga ttttggaaat tcctcatatc ccagttttgc ttaatgaagt tcaagagatt
       61 tttaaaaatc ttaaaacagg ttatttttta gactgcactt taggatttgg cggacatagt
      121 gaagctttgc ttaaaaatca tcctgatctt aaattcattg cttgtgatca agatcaacaa
      181 gctttagaat tttctaaaaa acgtcttaaa gattttcaca ataggataac ttttatacaa
      241 agtaatttta gtgaagtttt agaaaaaatt tcatataaag aagaattaag aggtatttta
      301 gcagacattg gagtttcttc atttcaactt gataataacg aaagaggttt tagtgtaaat
      361 tctgactttt tggatatgag aatgaatcaa aactccaaaa tatcggctta tgagattatt
      421 aatacttata caaaagagca attaacttcc atttttaaag attatggaga attgcacgat
      481 gcacatttta ttgctgaaaa aatttgccta gaaagaagta aaaatccaat caaaagcgcc
      541 aaggaacttt atcaaatcat aggaaaaggc aaacaaaatc atagaaaaat ttccaaagcc
      601 actttagcat ttcaagccat tagaatagaa gtaaatcaag aacttaaagt gcttaaagat
      661 tttcttgggc atttagaaaa tttaaaacca aaaaattgca ttttagcaat cattagtttt
      721 cattctttgg aagatagaat agtaaaaaat tttttcaaaa aatggtcaaa aaactgcatt
      781 tgtgatgaaa aaataatgcg ttgcgaatgt ggaaataacc atagcctagg gcaaataata
      841 accaaaaaag ctataagtgc aagcaaggaa gaacttttaa aaaattctcg ctctagttgt
      901 gctaaaatgc gggcttttta ttttaataat ttggacaata aataatgcta gaagatgatt
      961 ttataaaaga acgccaaaac atacgccaaa aaatgctgaa attttctcgc gctataaatc
     1021 aaggcaaacc gcttgatgat gatttaagag atgaaatttc tagcgatgat attttaagac
     1081 gtcgttttaa aaaaaagact cctaataaat tcttagaaga actcgatgaa gagtatgagt
     1141 caaaacatac taaaaaatca aatatatatt taaaagaaga tctgatcaat gttaaattag
     1201 aagaaaagca atctcttgct aaaaaatttt tttccaaaat gaaagaaagg aaaaaagaag
     1261 aaaataaaaa aactaaaaag attttttcat ttggaagaaa aaaaataaac aagataaaaa
     1321 atattcaaac caaaccaaaa attcaaacaa aaaatgatca aaaccctatc caagataaaa
     1381 aagaaaaaaa agaatccata aaatctatag aaaaaattca aaaaaccgaa cctaagatac
     1441 aaaattctca aactatagaa aaacgacctg atattaaaaa acaacccgat attaaacaaa
     1501 gtttggaaaa tttacaaaaa aaaataacac cacaagaaaa taaacaagaa cttccaaaac
     1561 catctaatca agctcaagaa aaacaacaaa atgatgaaga tgctcaaaag gcaaaaaatg
     1621 ttttactaga aggcttctct aatgccacca aagaagatag aaacctaaat ttcaatcatc
     1681 ttctttttgc ggctttactt gttagttttg cgttattttt atttgctcca caaatttata
     1741 ttagaaatca aatttattat cttagtagag aaattgctac attaagaaca gaagaaagcg
     1801 ttttaaacga agaaaataaa gatttaaaaa gaagacttga aaatatgcga ttccaaaatc
     1861 aaattttaga ttatttagaa tgaataatct tatctaaaac atactgctct aaatttgctt
     1921 ttggaatttc ttcttttaag gcttccttat aaatttcacc tgccattata gagtattttt
     1981 cataagcaaa ataagggaaa tgcaaagccc aagctttttg tattattttt tttgagatta
     2041 ttttgcgagt ataaacttta aaaatatcat atcctataaa tacacaagca gtaaccataa
     2101 cagcactcac tatgcttata tgaaagtcaa gttttgttaa aaaataatga gtaattaaaa
     2161 gcaatggtaa caaaaccaca gcacaaaaaa caccaaaata aatataagaa tttagaattt
     2221 tgaaattaaa atttagctta gaaggatcta caagcatacc gtcattaaaa agtgcatttg
     2281 cctctaataa atccttcact aaaacaggtt gttctgatac tttaaataaa aaacgaaggc
     2341 taaattcttt aaattttttc ataatccacg ctttattttt taattaaaat tttatctaaa
     2401 caaaattaat ttttactaaa tataatcctc tttcaattgc ttattaattc ttctgtgatt
     2461 ctggctattt ctaattcttc atctgtagga ataacaagca ctttaacttt agaatttgca
     2521 tgatttatca ttctttcgcc cgaaatcctt tgtttgttaa gttcaaaatc taactcgata
     2581 ccaagatgag ctaatctctc acatactttt tgtcgaacca aactatcatt ttctcctata
     2641 ccacctgtaa aaataatagc atcggttttt ggcaacacag caaagtagga tcctatatat
     2701 ttaacaagac gataacaaaa catatcaaga gccaagcgtg ctttatcatt accttgttct
     2761 atctctcttt ctatatctct aaaatcatta taaccgcaaa ttccatatac tccacttttt
     2821 ttattcatca gtgtatctat ttcttctatg gttaaaccct taagatgact aataaaaggt
     2881 aaaatagcag gatctaaatc tccacaacgc gttcccataa caagcccttc aagcggagta
     2941 aatcccatag aagtatccac actcttacct ttttctatag cacatacact tgcaccattt
     3001 ccaagatgag cagagataac atttagttca cttttatctt tttcaagcaa acttgccgct
     3061 ctagaactga caaaagcatg agaagtccca tgaaaaccat atcttctaat attatgctta
     3121 tcataaaaat cataaggcaa agcatacata taagcaaaat caggcatagt acgatgaaaa
     3181 gctgtatcga aaatagccac atttgcaaca ctaggtgcag ctttaatcat tgtttttata
     3241 cctgctaaat gggcaggatt atgcaaagga gcaaaaatac taaccctatc tatctcttta
     3301 agaacatagt catctactaa acaatgctca cttaaatttc ttcccccgtg aactatacga
     3361 tgaccacagc catcaagagc atttaaatcc gctaaaattc ctgattcttt aaaaagctca
     3421 ttgactatac taagtccttc ttcgtgatta tttatcatta attctctttc aaaactttca
     3481 ttatttaaaa cattttttaa tataactttt gaattttgct ctccgatttt ctctactaaa
     3541 ccactcgctt taacgacttt attatcaaaa aatttaaatt taatcgatga agaacctgaa
     3601 tttaaaacta aaattttcat ttattattcc tttctattga gcttgtatag cacttaaaat
     3661 aacagtatct acaatatcat ctaccaaaca tccacgactt aaatcattaa caggtttttt
     3721 aagaccttgc aaaataggac cgattgctaa agcattagca gttctttgaa ctgctttgta
     3781 acaaatattt gctgcattaa gatcaggaaa aatatataca tttgcatggc ctgctatctt
     3841 agaatttggc attttctttg ctgcagtctt tggatcataa gcgcaatcaa actgcatagg
     3901 accatctata tttaactcag ggtatttttc tttagcaatc tttaatgctt cttttacaag
     3961 atctacgctt tctcccttac cgctatcacc actagaataa gaaagcaaag ctattcttgg
     4021 ttcaagtcca aaagatttag cagtcatagc acttacataa gcactagttg caagctgttc
     4081 agcagttgga cttggattta cagcacaatc agcaaaagct aaaacttgat cttcaagccc
     4141 cataaagaaa attcccgaaa cagaactaat accttctttg gttttaataa gctgcaatgc
     4201 agggcgaatc gtttcagccg tagtagttga tgctccacta accatagcat cagcttttcc
     4261 agtatgtata agcaaagttc caaaataagt tttatcctga actagcatct tagcctcttc
     4321 taaactcatt cctttagatt ttcttgcctc ataaagaatg gaagtaaatt cttgattata
     4381 ttctgaattg agcggattca taatttgtat agtacttaaa tcaagactta atctagcagc
     4441 atcttgtttg attttttcct catcacctaa taaaataaga tcaacaactt tactttttaa
     4501 taaaatttca gcagctttta aaattctctc atcattactt tctggcaaaa caacagtttt
     4561 tttatttttt acgctttgtt taatcaattc atatttaaaa cgatgtggag ttataaaatc
     4621 atactcttca agcttttgca cttcctcaaa attaaaattt tcattaatca aaacataatt
     4681 acgaccatct agggcatgat cgaaatattt ttgagctata agtttatcct catcgttaat
     4741 aatagcagcg ataggggtat taagattttt agccaatttt atactaagat caaatccatc
     4801 aagtattcca aattcgcaaa agctatttac aagcacaaaa tcgtatttgc gttttaactc
     4861 ttcgtattct tctaaaataa cattaaaaaa attatgagga tctttgctaa attcctccat
     4921 tgcttctcta aaggtaaaac cataagcgct ttttacagtt tgattgatat taaattcttc
     4981 caaccaacct tgcaaaacag ggacgcgatg tatgtatatt acagggcaat aaattgcgat
     5041 atttttgtaa attttgctat aatttttaag caaatttgta ctaataatag tatttaactc
     5101 atcacttcta gatctcatca aataaagatt tgccatcatt ttctccttga atttataaat
     5161 gtggaacact ctttgctttt tctaatttta acaaagaaaa ataaaaattc atattttaaa
     5221 ggacgaaaat gaaaaaagtt ttattttatg tgttaccgtt tgcgtttttt ggttgttctg
     5281 caacggttga tccgcaaatt tcaatgaaac cacctgctta tgtagaagaa cttgcaccaa
     5341 aacaaagtaa taatgtagaa agtgcaccag gatcgctttt tggcaaaggg gataatcctt
     5401 tattttcaga taaaaaagct atgaatgtaa atgatttagt tacagttgtt atacaagaaa
     5461 gtaccactca aagcacacaa gctaataaag caacaagtag aactaatacc tcaaatttag
     5521 gcggaggtgc tttaacagga agttcaggag tggtagctaa tgctcttaat aaagtcaatg
     5581 cttattctaa tataggcttt caaaccaata gttcaaacaa ctacacagga acaggctcac
     5641 aaagcagaaa tgaaagtttc aatactacaa tttcaacgcg tgtaattaaa attttatcaa
     5701 atggtaatta ttttatcgaa ggctcaagag agcttttaat caacggagag aaacaaatca
     5761 tacaattaag cggtgttatt cgtccttatg acatcggtca agacaatact atagatagta
     5821 aatatatagc agatgctaaa attctttata aaacagaagg tgaagtggat agaagcacaa
     5881 gaaaaccttg gggtagcaaa gttatagaag cgatatggcc attctaaaag caaggttaaa
     5941 ccttgcttct tggcttttat tcttttacag ccctactttt aacctcatct tcaacttcag
     6001 ctaaaaatct atctacaagt tcactttctt ttaatttagc tacaacttca ccatgtctta
     6061 taacaagtcc ttgatttttc ccaaaggcta tagccacatc agcgccctta gcttcaccta
     6121 aagcatttac tacacaaccc ataacactga tatttaaagg ttcttttata tgcttggttt
     6181 tttcttctac gattttaatc gcgcttaaca aatcactttg aatcctaccg caagttggac
     6241 atgagatgat atttactccg cttttttgca ctccactatc ttgcaaaatc gctcttgcta
     6301 cacgaatttc ctcttcaagc tcacccgtca tagaaacacg catagtatcg cctatacctt
     6361 taagaagtaa atttcctaaa gctatagaac tttttacagt gctatgaaat ttagttcctg
     6421 cttcagttac ccctaagtga aaaggataat cacaaagcgg tcttaatctc tcataagctt
     6481 ctatagtttt ttgagcatct gaagtcttca tggaaatttt aatatcaaaa aagtctaaat
     6541 cctctaaaag cttgatatta tacatcgcac tttctagcat agcatcgaca ccatagccaa
     6601 atttatcact aaattgtttt tctatggagc cgtgatttac accgatacgt atagggatac
     6661 cccgttcttt acatgctttt accacttctt tgatattttc tttagaacct atattgccag
     6721 gatttatacg cactccatcg ataaattcag cacaatatac agccaaatta tgattaaaat
     6781 gaatatctac gattaaaggt agaggacttt tagctttaat ctcttttaaa gcccttgcat
     6841 cagccatatc caagcacgcc aaacgcacta tgtttgctcc tgcaaaataa agacgattga
     6901 tttgttctaa agaaccttct atatctcttg ttttagtaaa aagcatagat tgaactgaaa
     6961 tgggtgcatc accgcctatt aaaacatttc ctactttgat ttgtctggtt ttaaatcttt
     7021 tatactccat aacttcactc tttgaaaaat tttaatatca aattttaact ttttattgct
     7081 ttaattaaag tttatttttg ataatatagg aaaaattttt acatttatac taaacaaaaa
     7141 aggaggttat ctatggattt ttttaaaaat ggtggagtta tttggattac aggactagca
     7201 ggaagtggca aaagttatat tgcagaagca ttatacaaaa aattaaaaga aaaatacaat
     7261 aatattattt atcttgatgg cgatgaactg agagatcttt tagagcatta tggatatgat
     7321 aaacaaagtc gtatcgatat gtcaataaag cgttctaaat ttgcacattt tctcagttct
     7381 caaaatatgc tagttatcgt aagcgctatt tccatgtgga atgaaattta cgaacacaat
     7441 aaaaaaactt taaaaaatta ctttgaaatt tacataaaat gcgattttga agaattaaaa
     7501 aaacgtgata aaaaaaactt atatagcaaa aacttaaaag gtgaaatttc aaatgttgtg
     7561 ggaatggata ttgattttga tgaaccaaaa tctaatttaa taattgataa tacttatatg
     7621 acagaacttg acaataaaat ttcctacatc ttaacagctc taaaagaaaa aaaataaaga
     7681 aaaaagcatg caaaatcttt tactctatat aaaaaataac ctaactccaa ccctagctca
     7741 aattctttta caagctttaa aaaattcgaa taatgaaaaa ttttttacct ttgttttgaa
     7801 aaatattgaa acaatttgca cttggctcaa ttctagcgaa tttaagaata gatatttatc
     7861 aataaaacat ccttatccac ctttaatcaa tcctaatttt atagaaatag atgctagtcg
     7921 acattgtgca gaattagctt gggatttaaa tttaccccta cctaaacact ataaatttat
     7981 ctatatttct ccacatggcg ttggagcagc agcattttta agatacctta atcaatgttg
     8041 cgatgtaact tgttttgcct cctgggtttt accacctgat gccaaagaaa gatattgtct
     8101 taattacatg tgtctaaatg acaatacgat tactcaatat gctattaata tatcagaaat
     8161 taatctacct tattttgata aatatctatc tttattggat tttaactcta aaattatttg
     8221 cggagttcgc gatccaatag gaattttaaa gcataactgg ggaagagatt ggagtaaagt
     8281 tttaagaaac tatccctctg aatttaatct aacttatgat tggcgttatt atattgacta
     8341 tcttactcat caaaatcata aaattaaaat cgatataaac gaactacaac aaggagtttt
     8401 tatcatctct tatttattaa aatattttaa caaagacaat gtatactatc ttgatatgga
     8461 agaaatccgc caatcaaagg ccttcgatac catgaattta cttgctataa attttaattt
     8521 tacccccccc ataaagataa attagattta tttaaaatta aagaatttag aggttatatt
     8581 cgctatcttt ttcctatcac actctatgca aattctaaag atattaataa caccttttat
     8641 cttaatactc ctaaaaataa taaaaatttc aatattgata aaacttctag cattcccata
     8701 attttagaca gaaaacatat caatcatgaa aaaatagaca taatacaaga aattataaaa
     8761 aacgatctat gtaatgatat gggtgtatat attgataaaa atgattttaa acaattagaa
     8821 caaaacaatc ttttattttc aacaattaaa cattatttgt atgatttttt atatcaaatt
     8881 aaaataacca tagatgaaac agaatcaaaa atgatgaaag aaaaagatgt aatagattat
     8941 tttataaaaa ataaatcact tgtttacact ttttttaata tttttgaaaa tgatctaaat
     9001 catttaaagc aaaaatttcc caatataatt aactcttgga catactataa agaatttgaa
     9061 aaatgcgtca agagttagat gacaatattc agggaaaaga tgtaaggggt attttaaaaa
     9121 gagtatgtaa ctatccctaa ataattttag caaaaaatac caaataatag gattttaaag
     9181 cttacaaaaa tgacttttta tctttcctag tttaaagtgt aaaaaatccc aaatatccca
     9241 aaaatcccaa aatgtctgtt ttatcccaaa aaaactgatt aaatgctgtt taaaaggcgg
     9301 ataaatacga gctttgattt taaattttat atcccaaaag tgttttttac tctctaggat
     9361 agttacattt ttgcttaaaa tattcttata ttttttaacc ttgtaactat ctctataaaa
     9421 cactatataa tcatacttta accacttttt atataaaaat agtatgtaac tatctatagc
     9481 tttaaggttt ggaggatagt tacatagaaa acttaaacat ttagttggtt tttataatct
     9541 tataatagac taagattact tcaat
//
LOCUS       DAPWGO010000061         9474 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.062, whole genome shotgun sequence.
ACCESSION   DAPWGO010000061 DAPWGO010000000
VERSION     DAPWGO010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9474)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9474)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9474
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.062"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..280
                     /locus_tag="RJ336_001289"
     CDS             <1..280
                     /locus_tag="RJ336_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDZ5213737.1"
                     /translation="NFISNKILQNQNKKNLFYQIKDFENLAKKRYERYENLGFWVCEG
                     HYHQNHQINKENIKYLNLASFAYERSFFVVEYQQEIKFREQKLRGQNV"
     gene            273..1229
                     /locus_tag="RJ336_001290"
     CDS             273..1229
                     /locus_tag="RJ336_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HDZ5213738.1"
                     /translation="MFDENIVKTGSNEMELVDFRIFKQGHDKVYEGIYGVNVSKVREI
                     IKIPSLTELPGVPDYIEGIFDLRGVVIPVVNLAKWMQITEPESTMLKPRVIITEFSNI
                     LIGFIVHEAKRIRRINWKDIEPATFSTGSGALDKGKITGVTRIENDEVLLILDLESVV
                     EDLGIYAPKTDIDFGKIEKFTGTALILDDSMTARKRVKEMMQQMGFQVVEAKDGVEGI
                     NKLEELSQVYGESLNDTLKIIVSDVEMPQMDGFHFAARIKEDPRFKDIPIVFNSSLSN
                     EFMNEKGVQEAGGEGYLVKFNASDFFNEIAKVIKKHQSQEQG"
     gene            1233..3542
                     /locus_tag="RJ336_001291"
     CDS             1233..3542
                     /locus_tag="RJ336_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDZ5213739.1"
                     /translation="MEDMQEILEDFLVEAFELVEQIDHDLVELESNPEDLELLNRIFR
                     VAHTVKGSSSFLNFDVLTKLTHHMEDVLNKARHGELKITPDIMDVVLESIDRMKTLLN
                     SIRDNGNDTAIGMDIEPICARLTAISEGESPVAATDSNEKSTPQAEPEAPKQETTTPE
                     PEVDVNQLSDSEVEAEIERLLKVRKAEDQARRAQKKQTTNAAPKPTNNTANKPAESGE
                     KKVPASGSNASSMDQTIRVEVKRLDHLMNLIGELVLGKNRLLKIYDDVEERYEGEKFL
                     EELNQVVSQLSIITTDVQLAVMKTRMQPIAKVFNKFPRVVRDLSRELGKQIELEITGE
                     ETELDKSIVEEIGDPIMHMIRNSCDHGVEDPATRAANGKPEKGIVQLKAYNEGNHIVV
                     EITDDGKGLDPNGLKAKAIEKNLITEREADQMTDKEAFALIFKPGFSTAAKVTNVSGR
                     GVGMDVVKTNIEKLNGVIEIDSELGKGSSFKLKIPLTLAIIQSLLVGTQEEFYAIPLA
                     SVLETVRVPIDDIYTIEGKNVLRLRDEVLSLVRLSDVFGVKQVLESGDQTYVVVIGVA
                     ESKLGIIVDTLVGQEEIVIKSMGDYLQNIQGIAGATIRGDGRVTLIIDVGAMMDMAKE
                     IKVDIKAQLESSAKKPKEQPSDYKVLIVDDSKMDRTLMQKALEPLGVSLVEATNGVEA
                     LNIIKSGEHDIDAMLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRG
                     VEVGMTEYITKPYSPEYLENVVRKNLKLG"
     gene            3547..4068
                     /locus_tag="RJ336_001292"
     CDS             3547..4068
                     /locus_tag="RJ336_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-binding chemotaxis protein CheW"
                     /protein_id="HDZ5213740.1"
                     /translation="MSNEKLEQILQKQQTQMAGPDVDQREDDIIQLVGFVVGDEEYAI
                     PILNIQEIIKPIEYTRVPSVPDYVLGVFNMRGNVMPLIDLAQRFHLGSSKMTPQTRYI
                     VLRGETNGTGVGGNAGFVIDRLTEAIKIHRNRIDPPPETLVKDKGMIYGIGKRDENIL
                     TILKVEALLKREF"
     gene            4068..4691
                     /gene="serB"
                     /locus_tag="RJ336_001293"
     CDS             4068..4691
                     /gene="serB"
                     /locus_tag="RJ336_001293"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HDZ5213741.1"
                     /translation="MIKLCVFDFDATLMDGETIDILATAHGKGNQTSEITRHAMAGEL
                     DFFESLQKRVSLLKGMSYKKVLELGSTLPLMHGAHELIQYLKSKNIQIVIFSGGFHEG
                     IDPAMQKLGINLSFANYLHHKNDILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVM
                     CVGDGANDLAMFNESGLKIAFCAKEILRSQADICIDIKDLKEIIKVI"
     gene            4691..5668
                     /locus_tag="RJ336_001294"
     CDS             4691..5668
                     /locus_tag="RJ336_001294"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDZ5213742.1"
                     /translation="MKNFSLWCDFIENSFLDNEFLNLLSHGINGATSNPAIFKNAILN
                     SPIYKDKILKLKGKRTKDIYEELAISDIQKAADKLAPLFYQKNDGFISIEIDPRLHDN
                     TTLSLGEAKRLYSAISKENVMIKIPATKASYEVMYELMKNGISVNATLIFSLEQSQKC
                     FEALNAGLVEFRKNNIALKEQNTRTPQAVISIFVSRFDRLLNPKAKEQNRIGILNANL
                     AYNNIYSKNEPNIRALFASTGVKGDDLPKDYYIKELLFENSVNTAPLDAIEAFKGKMD
                     FKKPLMNFEIYTELNQIISQSEREKACNDLLSDGIEQFCIAFEDILKAL"
     gene            complement(5669..6091)
                     /locus_tag="RJ336_001295"
     CDS             complement(5669..6091)
                     /locus_tag="RJ336_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5 YciO YrdC YwlC family protein"
                     /protein_id="HDZ5213743.1"
                     /translation="MIYLAQTDTTVGFLSKNLEEINALKGRDKNQPCLITSAKFCELK
                     SLARIPKSFKNLVRRSKKTTFIYPNNQAIRIVKECKHANFLSKNGYFYSSSANKHGKE
                     FDEEWARSVADIILDEKFFENIPSKILKLSKNKMIKIR"
     gene            complement(6088..9357)
                     /gene="carB"
                     /locus_tag="RJ336_001296"
     CDS             complement(6088..9357)
                     /gene="carB"
                     /locus_tag="RJ336_001296"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDZ5213744.1"
                     /translation="MPKRTDIKSILLIGSGPIVIGQACEFDYSGTQAAKTLKELGYRV
                     VLINSNPATIMTDPEFADATYIEPITKESILSIIKKEKIDAILPTMGGQVALNVAMEV
                     YESGLLGDVKFLGANPEAIKKGEDRQVFKECMKKIGMDLPKSMYAYNYDEALKAVDEI
                     GFPLMIRASYTLGGAGSGVVYNMDEFKELANTALALSPIHEILIEESLLGWKEYEMEV
                     IRDRADNCIIVCSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFAILREIGVD
                     TGGSNVQFAINPKNGRMIVIEMNPRVSRSSALASKATGYPIAKVATLLAVGFSLDEIK
                     NDITGTPASFEPVIDYIVTKIPRFTFEKFPGANTTLGTAMKSVGEVMAIGRTFKESIQ
                     KALCSLERSLSGFDRVKFEDRNDLVFKIRNANEKRLLYVAQAFREGFSVEELYELCKI
                     DPWFLTQIKEIVDFEEQIDMDILNNKALLRKAKTMGFSDKMIALLVNLKDNLELSQND
                     IYYARMKQKIIAEFSEVDTCAGEFEALTPYLYSSINVSELTQSKNDAKDKKEKKVMII
                     GGGPNRIGQGIEFDYACVHASFALKDMGIKTIMYNCNPETVSTDYDTSDILYFEPIDF
                     EHLRAVIEREKPDGVIVHFGGQTPLKFAKRLSAFGAKIIGTSARVIDMAEDRKKFAEF
                     ITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGGRAMRVVNDEAELRLYMQ
                     EAVDVSDKSPVLIDQFLDNATEIDVDAICDGKDVYVAGIMEHIEEAGIHSGDSACSLP
                     PCNIDEKMQEFIAQKTADIALNLGVVGLLNIQFALHNNELYMIEVNPRASRTVPFVSK
                     ATGIPLAKVATRVMWQGNLKEALKFYDTFKVVNFDTKILRPKTPKYMSVKEAVFPFAK
                     LSGSDLELGPEMRSTGEVMGISKDFANSYAKSQIASFNHLPEQGVVFISLKDKDKKYT
                     KKIAAEYVKLGFKLMATGGTCKEILESGFECELVHKISEGRPNVEDKLKNGEIHLVIN
                     TSDNHSFKGDTKKIRENIIRFKIPYFTNLRSALAGAKSIKAIQSKSCLDVKSLQEWLK
                     S"
BASE COUNT         3320 a         1556 c         1568 g         3030 t
ORIGIN      
        1 taattttatt tcaaataaaa ttcttcaaaa tcaaaacaaa aaaaaccttt tttatcaaat
       61 aaaagatttt gaaaatttag cgaaaaaaag atatgaaaga tatgaaaatt taggattttg
      121 ggtatgtgaa ggacactatc atcaaaatca tcaaatcaac aaagaaaaca ttaaatatct
      181 taacttagct agttttgcat atgagagaag tttttttgta gtagaatatc agcaagaaat
      241 caaatttcga gaacagaaat tgaggggtca aaatgtttga tgaaaatatc gtgaaaacgg
      301 gttcaaatga aatggagctt gtcgatttcc gtatctttaa gcaaggacac gataaagtct
      361 atgaaggaat ttatggtgta aatgtttcta aggtaaggga gattataaaa atcccaagcc
      421 ttacagaact tccaggtgta cctgattaca tcgaaggtat ctttgatctt cgtggagtgg
      481 ttatacctgt agtcaatctt gccaaatgga tgcaaatcac tgagccagaa agcactatgt
      541 taaaacctag ggttattatt actgaattta gcaatatcct tattggtttt atagttcacg
      601 aagcaaaaag aattcgtaga ataaactgga aagatataga accagcaact ttttctacag
      661 gatcaggtgc tttagataaa ggtaaaatca caggtgtaac acgcattgaa aatgatgaag
      721 tgttgctaat tttagatctt gaaagtgttg ttgaagattt aggaatttac gctccaaaaa
      781 cagatataga ttttggaaaa atagaaaaat ttactggaac agcacttata cttgatgaca
      841 gcatgactgc tagaaaacgc gtcaaagaaa tgatgcaaca gatgggcttt caagttgttg
      901 aagctaagga cggcgtagag ggcataaaca aattagaaga attaagccaa gtttatggtg
      961 aaagtttaaa tgatacttta aaaattatag taagcgatgt cgaaatgcca caaatggatg
     1021 gtttccactt tgctgcacgc attaaagaag atccaagatt taaagatatt cctatagtct
     1081 ttaactcgtc tttatcaaat gaatttatga atgagaaagg tgttcaagaa gctggtggag
     1141 aaggctatct tgtcaaattt aacgctagcg atttcttcaa tgaaattgca aaggttatca
     1201 aaaaacatca atctcaagaa caggggtaaa atatggaaga tatgcaagaa atacttgaag
     1261 actttttggt tgaagctttt gagcttgttg agcaaatcga ccatgattta gtagagcttg
     1321 aatcaaatcc agaagattta gaattattaa atagaatttt ccgtgttgca catacggtta
     1381 aaggatcatc aagtttctta aattttgatg ttttaacgaa gttaactcac cacatggaag
     1441 atgttttaaa caaagcaaga catggcgagt taaaaataac tccagatatc atggatgtgg
     1501 ttttagagtc tattgataga atgaaaactt tgcttaattc cattcgtgat aatggcaacg
     1561 atactgctat tggtatggat atagaaccaa tttgcgcaag attaacagct atttcagaag
     1621 gagagtctcc tgttgcggca acagattcaa atgaaaaatc tactccacaa gcagaaccag
     1681 aagcaccaaa acaagaaaca actactcctg aacctgaagt agatgttaat caattaagtg
     1741 attctgaagt tgaagctgaa atagaaagac ttttaaaagt tagaaaagct gaagatcaag
     1801 ctcgtcgcgc acaaaagaaa caaacaacaa atgcggcacc taaaccgact aacaatacag
     1861 caaataaacc tgcggaaagt ggagagaaaa aagttcctgc ttcaggtagc aatgctagca
     1921 gtatggatca aaccatacgc gtggaggtaa aaagattaga tcacttaatg aatctaattg
     1981 gggagcttgt tttaggtaaa aaccgtttgc ttaaaattta cgatgatgtt gaagagcgtt
     2041 atgaaggaga aaaattcctt gaagaactta atcaggttgt aagtcaatta agtattatta
     2101 caactgatgt tcagcttgct gtaatgaaaa caagaatgca acctatagca aaagttttca
     2161 ataaattccc aagagttgtt cgtgatttga gtcgtgaatt aggaaagcaa atagaacttg
     2221 aaattacagg tgaagaaact gaacttgata aatctatcgt agaggaaatt ggcgatccta
     2281 tcatgcatat gattagaaat tcatgtgacc atggtgttga ggatccagca actcgtgcag
     2341 ctaatggaaa acctgaaaaa ggtatagttc aacttaaagc ttataatgaa ggcaatcaca
     2401 tcgttgtaga aattacagac gacggtaaag gacttgatcc aaatggctta aaagcaaaag
     2461 ctatagagaa aaatttgatt accgaaagag aagcagatca aatgacagac aaagaagctt
     2521 ttgctttgat tttcaaacct ggtttttcaa ctgcggctaa agtaacaaat gtttcaggtc
     2581 gtggcgtagg aatggatgtt gttaaaacca acatcgaaaa actaaatggg gtaattgaaa
     2641 ttgatagtga gttaggtaaa ggaagttcgt ttaaacttaa aattcctctt accttggcaa
     2701 tcattcaatc tttacttgta ggaactcaag aagaatttta tgcaattcca cttgcaagcg
     2761 ttcttgaaac agttagagta ccaattgatg atatctatac tatcgaaggt aaaaatgtat
     2821 tacgcttaag agatgaagtg ctttcccttg tgagactttc agatgtattt ggagttaaac
     2881 aagtccttga aagcggtgat caaacttatg tcgttgttat aggggtagca gaaagcaagc
     2941 ttggtattat agtagatact cttgtaggac aagaagaaat agttattaaa tccatgggtg
     3001 attatttaca aaatatccaa ggcatagcag gagctacaat ccgtggtgat ggtagagtga
     3061 cattaatcat tgatgtaggt gctatgatgg atatggccaa agaaattaaa gttgatatta
     3121 aagcgcaatt agaatcaagc gcgaaaaaac ctaaagaaca accaagtgat tataaagtct
     3181 taattgtaga tgattctaaa atggatagaa ccttaatgca aaaagcttta gaaccgctag
     3241 gagttagttt agttgaagca acaaatggtg ttgaagcatt gaatattata aaatctggcg
     3301 aacatgatat tgatgcaatg cttatagata tcgaaatgcc aagaatggat ggatacacct
     3361 tagctggtga aattagaaag tattctaaat atcgtaacct accactcatt gcagttactt
     3421 caagaacaag taaaactgac cgcttaagag gtgttgaagt gggtatgact gaatatatca
     3481 ctaaacctta ttctccagaa tacttggaaa atgtggttag aaaaaatttg aaactaggat
     3541 aagaatatga gtaatgaaaa attagagcaa attttgcaaa aacagcaaac tcagatggct
     3601 ggtcctgatg tcgatcaaag agaagatgat atcatccaac ttgtcggctt tgtagttgga
     3661 gatgaggaat atgcgattcc aattcttaat atacaagaaa tcattaaacc tatagaatat
     3721 actagagttc ctagtgtacc tgattatgtt ctaggggttt ttaatatgcg tggtaatgtt
     3781 atgccactca ttgatctagc tcaacgcttt catttaggaa gttctaaaat gacacctcaa
     3841 acaagatata ttgttttaag aggtgagaca aatggaactg gagttggagg aaatgctggt
     3901 tttgttatag atagattaac tgaagcaatt aaaattcaca gaaacagaat cgatccacca
     3961 cctgaaactt tagttaaaga caaaggtatg atttatggta taggaaaaag agatgaaaat
     4021 atcttaacta tactcaaagt agaagcttta cttaagcgcg aattttaatg attaaacttt
     4081 gtgtttttga ctttgacgct actttaatgg atggtgaaac catcgatatt ttagctacag
     4141 cgcatggcaa gggtaatcaa acaagcgaaa ttacccgcca tgccatggct ggagagcttg
     4201 attttttcga aagtcttcaa aaacgagtaa gccttttaaa aggtatgtct tataaaaaag
     4261 ttttagaatt aggtagcaca cttccactaa tgcatggagc acatgaactt atccaatatt
     4321 taaaatctaa aaatatacaa attgttattt ttagcggtgg ttttcatgaa ggcatagatc
     4381 ctgctatgca aaaacttgga attaacctta gttttgcaaa ttatctgcat cataaaaatg
     4441 acattttaac agggctagtt ggtggggaaa tgatgttttc aaattcaaaa ggcttaatgc
     4501 tacaacgatt aaaaagcttt ttaaatttga aaacagatga agtgatgtgt gttggcgatg
     4561 gggcaaatga tttggcaatg tttaacgaaa gtggattaaa gattgcattt tgtgctaaag
     4621 aaattttacg ttcccaagct gatatttgca tagatataaa agacttaaaa gaaataataa
     4681 aggtaatata atgaaaaatt tttctctttg gtgtgatttt atagaaaata gttttttaga
     4741 taatgaattt ttaaatttat tatcacatgg aattaatggt gctacttcaa atcctgctat
     4801 ttttaaaaat gctattttaa attctccaat ttataaagat aaaattctta aattaaaagg
     4861 aaaaagaaca aaagatattt atgaagaatt agcaatttct gatattcaaa aagcagctga
     4921 taaattagcc cctctttttt atcaaaaaaa tgatggattt ataagtattg aaatagatcc
     4981 aagacttcat gataacacga ctcttagttt aggcgaagct aaaagacttt atagtgctat
     5041 tagcaaagaa aatgtaatga ttaaaattcc agctacaaaa gcttcttatg aagtaatgta
     5101 tgaacttatg aaaaatggta ttagcgtcaa tgctacctta attttttctc ttgaacaaag
     5161 tcaaaaatgt tttgaagctt taaatgcagg tttagtcgaa tttagaaaaa acaatatagc
     5221 cttaaaagaa caaaatacta gaacaccaca agctgttata agtatttttg taagtcgttt
     5281 tgatagactt ttaaatccta aagccaaaga gcaaaatcgt attggaattt taaatgcaaa
     5341 tttagcttat aacaatatct actcaaaaaa tgaacctaat attcgcgcct tgtttgcaag
     5401 cactggagtt aaaggagatg atctgccaaa agactattat atcaaagaac ttctttttga
     5461 gaattctgtt aatactgctc ctcttgatgc aatagaggca tttaaaggaa aaatggattt
     5521 taaaaaacct ttaatgaatt ttgaaattta tacagaactt aatcaaatca tttctcaaag
     5581 tgaacgagaa aaagcttgca atgatttgtt aagcgatggc atagagcaat tttgtattgc
     5641 ttttgaagat attttaaaag ctctttaatt aacgtatttt tatcatttta ttctttgaaa
     5701 gttttaatat ttttgatggg atattttcga aaaatttctc atcaagtatt atatcagcaa
     5761 cacttctagc ccattcttca tcaaattctt ttccatgctt gtttgccgaa gatgaataaa
     5821 aatagccatt tttacttaaa aaattcgcat gtttacactc tttcacaata cgaatggcct
     5881 gattatttgg ataaataaaa gttgtttttt tagaacgacg tactaaattt ttaaaagatt
     5941 ttggaattct tgctaaactt tttaactcgc aaaatttcgc agaagtgatt aagcaaggtt
     6001 gatttttatc tctacctttt aaagcattaa tctcttctaa atttttactt aaaaatccta
     6061 ccgtagtatc tgtttgagct aaataaatca agatttaagc cactcttgca aactctttac
     6121 atctaggcaa gatttactct gtatagcttt aatcgatttt gcacctgcta aagctgatcg
     6181 taaatttgta aaataaggta ttttaaaacg aataatattt tcacgaattt ttttcgtatc
     6241 acctttaaaa ctgtgattat cacttgtatt gataactaag tgaatttctc catttttcaa
     6301 tttatcttca acattggggc gtccttctga aattttatgt acaagttcgc actcaaaacc
     6361 actttctaaa atttccttac aagttccccc tgttgccata agcttaaagc caagctttac
     6421 atattctgca gcgatttttt tggtatattt tttatcctta tcttttaagg agataaatac
     6481 cacgccttgc tctggcagat gattaaacga tgcgatttga ctttttgcgt aagaatttgc
     6541 aaaatcctta cttataccca taacttcacc cgttgaacgc atttcagggc ctaattctaa
     6601 atcacttccg ctaagttttg caaatggaaa tactgcttct tttacgctca tatattttgg
     6661 agttttaggg cgtaaaattt tagtatcaaa attaaccact ttgaaagtat cataaaattt
     6721 taaagcttct tttaaatttc cttgccacat cacacgcgtt gccacttttg ctaaaggaat
     6781 acccgtagct ttactaacaa aaggcacagt acgactagct ctaggattta cttctatcat
     6841 ataaagctca ttattatgta aagcaaattg tatatttaaa agccctacaa ctcctaaatt
     6901 taaagcaata tctgcggttt tttgtgcaat aaattcttgc attttttcat cgatattaca
     6961 aggtggtaaa gaacaagcac tatcgcctga atgaattcct gcttcttcta tatgctccat
     7021 aattcctgcc acataaacat ctttgccatc acaaatcgca tcaacatcaa tttctgtagc
     7081 attgtctaaa aactgatcga tcaaaacagg acttttatca ctcacatcca cagcttcttg
     7141 catatagagt ctaagttcgg cctcatcatt taccacacgc atcgcacgcc cacctaaaac
     7201 ataacttggt cttacaagca caggatatcc tatatcacta gctttaagca ccgcttcttc
     7261 cacacttgtt gcagtggaat tttttggctg attaatacct agctttgtaa taaattcagc
     7321 aaatttcttt ctatcttctg ccatatcaat tactcttgca ctagtaccta taattttagc
     7381 tccaaaagcg cttaaacgct tagcaaattt caaaggagtt tgtccgccaa aatgcacaat
     7441 cactccatca ggtttttcac gctcaatcac cgctcttaaa tgttcaaaat caataggctc
     7501 gaaatacaaa atatcacttg tatcatagtc agtcgaaacg gtttcaggat tacaattata
     7561 cataatagtt ttaataccca tatctttaag cgcaaaagaa gcatgtacgc aagcatagtc
     7621 aaattctata ccttgtccta tgcggtttgg ccccccgcct ataatcatca cttttttttc
     7681 ttttttatcc ttagcatcgt ttttactttg agtaagttcg cttacattaa tacttgaata
     7741 aagataagga gttaaagctt caaattcacc cgcacaagta tccacttcgc taaattctgc
     7801 aatgattttt tgcttcattc ttgcataata aatatcattt tggcttaatt ctaaattatc
     7861 tttcaaattt acaagcaagg ctatcatttt atctgaaaaa cccatagttt ttgcttttct
     7921 caaaagagct ttattgttta aaatatccat atcaatttgc tcttcaaaat ctacaatttc
     7981 tttaatctgt gttaaaaacc aaggatctat tttacaaagc tcataaagtt cttctacgct
     8041 aaaaccttct ctaaaagctt gagcaacata aagcaaacgc ttttcattgg cattgcgaat
     8101 tttaaaaaca agatcatttc tatcttcaaa ttttactcta tcaaaaccac tcaaagaacg
     8161 ctcaagagaa caaagtgctt tttgtatact ttctttaaaa gtacgtccta tagccatcac
     8221 ctcacccaca cttttcatag ctgtacctaa agttgtgttt gcccctggaa atttttcaaa
     8281 agtaaagcga ggaatttttg ttacaatata atcaatcaca ggctcaaaag atgcaggagt
     8341 tcctgtaata tcatttttaa tctcatctaa actaaagcct actgccaaaa gtgtcgcaac
     8401 ctttgctata ggatagcccg ttgccttaga agctaaagca cttgatcttg aaactcttgg
     8461 attcatttct ataactatca ttcttccatt ttttgggttg atagcaaact gcacattact
     8521 tccgcctgta tctacgccaa tttcacgcaa aatagcaaaa gaagcattac gcataacttg
     8581 atattcttta tccgtcaaag ttaatgctgg agctattgta atactatctc ctgtatgaac
     8641 tcccatagga tcgatatttt ctatactaca aactatgata caattatccg ctctatcgcg
     8701 tataacttcc atttcatatt ctttccaacc caacaaactt tcttcaatca aaatttcatg
     8761 gataggcgat aaagctaaag cagtattggc aagttcttta aattcgtcca tattataaac
     8821 cacaccactt ccagcacctc ctaaagtata agaagcacgg atcatcaaag gaaagccaat
     8881 ttcatctaca gcttttaaag cttcatcata attatacgca tacatcgatt ttggcaaatc
     8941 catgccgatt tttttcatac attctttaaa gacctgacga tcttcacctt ttttaatcgc
     9001 ctcagggttt gcacctaaaa atttcacatc tcctaaaagt ccactttcat aaacttccat
     9061 agcaacattt aacgctactt gtccacccat ggttggtaaa attgcatcaa ttttttcttt
     9121 tttaataata cttaaaatac tttcttttgt tatgggttct atataagtcg catctgcaaa
     9181 ttcgggatct gtcatgatgg ttgcaggatt tgagttgatt aatactacac gatatcctaa
     9241 ttcttttaaa gtctttgcgg cttgagttcc agaataatca aattcacaag cttgtcctat
     9301 cacaatagga ccacttccta taagtaaaat gcttttaata tctgttcgtt ttggcataaa
     9361 ttttcctaag agcataaatt tgggctgatt ataacaaaaa ttagttttat aaactttgaa
     9421 attatcgata taatttaaaa aataaacact ctgcttttaa tctaggaaat aata
//
LOCUS       DAPWGO010000062         9180 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.063, whole genome shotgun sequence.
ACCESSION   DAPWGO010000062 DAPWGO010000000
VERSION     DAPWGO010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9180)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9180)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9180
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.063"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..1202)
                     /locus_tag="RJ336_001297"
     CDS             complement(<1..1202)
                     /locus_tag="RJ336_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDZ5213745.1"
                     /translation="MRTYFSKIGFVLAVAGGAVGLGNAWKFPTLSAENGGFVFVLLYL
                     FFTLTIGFSIFLAEVAMGRLSKSDLANAYSNLAIKYGNRWRYGGVFMLGGIFVLSFYL
                     VIMGWVLKYTVVSLYYLPKTLDEAASNFQNLITTNLTSSVFFFILSFFLTLLIVSKGL
                     IKGIEKLNVVIMPSLFLMLVFMLFYCMGFKQGFANAFSYLFYPDFSHFKFSSIAEALG
                     LAFFTLCLGIGCIVTYSSALDKKTNFIKSSVYIVLINLLISFIMGLIVFTFIFEFGAD
                     PHTQGAGIVFVSLMSLFNQLGALGYIFAFCFFLALFFAGITSAVSMIEPLTFYMINNY
                     QISRVKALFLIGLFVFVFGICCILSLNLNFFSMFSFFGKDFFTLLDKLTSNFLLPLGA
                     IVCSIFVG"
     gene            complement(1215..2549)
                     /locus_tag="RJ336_001298"
     CDS             complement(1215..2549)
                     /locus_tag="RJ336_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDZ5213746.1"
                     /translation="MSSKFSKIGFILAVAGSAVGLGNAWKFPTLVGQSGGSAFILLYI
                     ILTLGVGFVIFLAELSIGKISEKDPVNAYEKLAPSNKKAWSYVGFTMVGAILIVSFYT
                     LVIGWIVKYVFLSITGNLPMDLEVSKAQFGFFTSEDFLSQFICFTLVFLCVFYIVSKG
                     VKNGIEKLNVWMMPSLFILLILMLVYAISKDGFMMAVKFLFVPDFSKINTSNVLEALG
                     LAFFSLSLGVGTIITYSASLPDKTNFITSTLNIIFINLLVGLLMGLVVFTFIFEFGYN
                     PNQQGPGLVFISLATLFEKIGVIGCIFGAAFFISLIFAGITSAVSMIEPFAFYLINTF
                     GMSRKKALILIGIVVYILGMLCILSSLKSTQFGFFGMSFFDLLDSISSKVIMPLGGIL
                     AAIFVGFVMKKEALKILFEPYMRGIFFELWYVFLRFISPLAVVIVMIAAFLK"
     gene            2783..3121
                     /locus_tag="RJ336_001299"
     CDS             2783..3121
                     /locus_tag="RJ336_001299"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDZ5213747.1"
                     /translation="MKKVLFLLLACAAVAFAAETNAPVEQEAINVWIKAFSVLAAGLG
                     LGVAALGGAIGMGNTAAATIAGTARNPGLGPKLMTTMFIALAMIEAQVIYALVIALIA
                     LYANPFIVLQ"
     gene            3156..3241
                     /locus_tag="RJ336_001300"
     tRNA            3156..3241
                     /locus_tag="RJ336_001300"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3190..3192,aa:Leu,seq:gag)
     gene            4316..4544
                     /locus_tag="RJ336_001301"
                     /pseudo
     CDS             4316..4544
                     /locus_tag="RJ336_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881942.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
     gene            4548..4907
                     /locus_tag="RJ336_001302"
     CDS             4548..4907
                     /locus_tag="RJ336_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDZ5213748.1"
                     /translation="MKDLDYYLNLPYEIIIKKLDEKDGGGYFARYKDFPYIMGDGENE
                     IEALKDLKEAFKGALEVMLEKGDYIKEPIDNEAKIRINITLPKSLVEAIDTISDNRSK
                     FLADLANSAIKSYKIST"
     gene            complement(5392..6291)
                     /locus_tag="RJ336_001303"
     CDS             complement(5392..6291)
                     /locus_tag="RJ336_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213749.1"
                     /translation="MHLNEAKGFMEKGDEAFKKAFANNIGQEIQNRTDLTSEEKAEIA
                     LAASAHAGFSVLGNGAEIQSSASSKRGIGNVETFSEAQKAAYNEIMERASLKTLSTTK
                     GMDSSWSNTLSGGDSTAYSKMVGYTQSYTQTEQGIQSVSTNNIDNTLNVVARDLAAGD
                     NKDFSNLNTAQQNEYFAKADNYVSDMVKNDPAQLAQYNSQYGAQSIVSPNNTTMPHAA
                     GMNFKTIDGSERSVLTQSNLNQDQVNQSSKRTSNTTTMPDSQEVKSGATHSQIAQDNK
                     KGSNAIRETSKNWNPIGKDTPSI"
     gene            complement(6347..8121)
                     /locus_tag="RJ336_001304"
                     /pseudo
     CDS             complement(6347..8121)
                     /locus_tag="RJ336_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871454.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
     gene            complement(8387..8850)
                     /gene="traN"
                     /locus_tag="RJ336_001305"
                     /pseudo
     CDS             complement(8387..8850)
                     /gene="traN"
                     /locus_tag="RJ336_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853989.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraN"
BASE COUNT         3472 a         1525 c         1262 g         2921 t
ORIGIN      
        1 aaacctacaa atatagagca tactatagca ccaagtggaa gtaaaaaatt tgaagttaat
       61 ttatctaata aagtaaaaaa atctttgcca aaaaaactaa acatagaaaa aaaatttaaa
      121 tttaatgaca agatacaaca aattccaaaa acaaaaacaa ataaacctat taaaaataga
      181 gctttaacac gagaaatttg atagttatta atcatataaa aagttaaagg ctctatcatt
      241 gaaacagctg aagtaatacc agcaaaaaaa agtgctaaga aaaaacaaaa tgcaaaaata
      301 tagcctaaag ctccaagttg attaaacaaa ctcatcaagg atacaaaaac aattcctgct
      361 ccttgagtat gcggatcggc tccaaattca aagataaaag taaaaacaat aagtcccatg
      421 ataaaagaaa tcaataagtt aatcaaaaca atatacactg aactttttat aaaatttgtt
      481 tttttatcca aggctgatga atatgtaact atacaaccta ttcccaagca taaggtaaaa
      541 aatgcaagcc ctaaagcttc ggcaatagag ctaaatttaa aatgtgaaaa atcaggataa
      601 aataaataag aaaaagcatt tgcaaaacct tgcttaaatc ccatacaata aaacaacata
      661 aaaacaagca ttaaaaataa gctaggcatt ataacaacgt ttaatttttc aatccctttg
      721 attaaacctt tagatactat taataaagta agaaaaaaag ataaaatgaa gaaaaaaaca
      781 gaacttgtca aatttgtagt aattaaattc tgaaaattac ttgctgcttc atctaaggtt
      841 ttaggaagat aataaagact aactacagta tattttaaaa cccatcccat aataactaga
      901 taaaaagaga gaacaaaaat accacctaac ataaaaacgc cgccatatcg ccatctattg
      961 ccatatttta tggcaagatt tgaataagca tttgcaagat cacttttact taaacgtccc
     1021 atagccactt cagccaaaaa aatactaaat cctatggtta aagtaaaaaa caaatataaa
     1081 agcacaaaaa caaaaccgcc attttctgcg cttaaagttg ggaatttcca agcattacct
     1141 aaaccaacag ctccaccagc aacagccaat acaaaaccga tttttgaaaa atatgttctc
     1201 attatttttc aaactcactt taaaaaagcg gctatcataa ctataacaac agccaaaggg
     1261 gaaataaatc tcaaaaacac ataccaaagt tcaaaaaata tacccctcat ataaggttca
     1321 aataaaattt ttaaagcttc ttttttcatc acaaatccca caaaaatagc tgccaaaatt
     1381 ccacctaaag gcataataac cttacttgaa atactatcaa gcaaatcaaa aaaactcatt
     1441 ccaaaaaatc caaactgagt actttttaaa gaagataaaa tacacaacat tcctaaaata
     1501 taaacaacaa ttcctattaa aatcaaagct tttttacggc tcataccaaa agtattaata
     1561 agataaaaag caaaaggctc tatcattgaa acagctgaag taataccagc aaagattaaa
     1621 gaaataaaaa acgctgctcc aaaaatacaa ccgatcaccc caattttttc aaataaagta
     1681 gccaaggaaa taaaaacaag ccctggtcct tgctgattag gattgtaacc aaattcaaag
     1741 ataaaagtga aaacaaccaa acccattaat agaccaacta aaagattgat aaaaataata
     1801 tttaaagtac tggtaataaa attagtttta tcaggcagac tagcagaata agtaataatc
     1861 gtcccaacac ccaaagaaag actaaaaaag gcaagtccta aagcttcaag aacatttgaa
     1921 gtgttgattt tggaaaaatc aggcacaaaa agaaatttaa ccgccatcat aaaaccatct
     1981 ttactaatag cataaacaag catcaagatt agtaaaataa ataatgaagg catcatccaa
     2041 acatttaact tttcaatccc attcttaaca cctttagaaa caatataaaa aacacataaa
     2101 aaaaccaaag taaaacaaat aaactgactt aaaaaatcct cacttgtaaa aaatccaaac
     2161 tgtgctttac ttacttctag atccataggc aaatttccag tgatacttaa aaacacatat
     2221 ttaactatcc agccaatcac caaggtataa aaagaaacta ttaaaatcgc ccccaccata
     2281 gtaaaaccaa cataagacca agctttttta tttgaaggtg ctaacttttc ataggcatta
     2341 accggatctt tttcactaat ttttcctatg ctaagctcag ctaaaaatat cacaaaacct
     2401 acacccaaag taagaattat ataaagcaag ataaaagcag atccaccact ttgacctact
     2461 agtgttggaa atttccaagc attacccaag cccactgctg aacctgctac cgctaaaatg
     2521 aaacctattt ttgaaaattt agaactcaat gttgcaacct taacttaaaa attattttaa
     2581 aatattatta aagcaaaaaa acttttaagc tttattgaaa acaatcaaat ttaaatcaaa
     2641 aatgtgaatt tttgtaaatt tcaataaaaa taaagatact tttggttata attcggcttt
     2701 atttttaagt cttaagtagg gatacgcaag ccgaactgat ttaaaaattg aaaaaaattt
     2761 tttttataga aaggttaaga taatgaaaaa agttcttttt ttattattag catgtgcagc
     2821 agtagctttt gcagctgaaa ctaatgctcc agtagagcaa gaagctatta atgtatggat
     2881 taaagcattt tcagttcttg cagcaggctt aggtcttggc gttgcagcac ttggtggtgc
     2941 tatcggtatg ggtaatactg cagcggcaac aattgcagga acagctagaa accctggtct
     3001 tgggccaaaa ttaatgacaa ctatgtttat cgctttagcg atgattgaag cacaagttat
     3061 ctatgctctt gttatcgcgc taatagcact ttacgcaaat ccttttatag ttttacaata
     3121 aaacttatca aagccctttt tgggcttttt tctatgcggt tatggtggaa ttggtagaca
     3181 cgccatcttg agggggtggt gcgctccgcg tgtgcgagtt caaatctcgc taaccgcacc
     3241 atttatactg ctaactacat aaattaacat aaatataaaa cttaaaaaat atctataaaa
     3301 taggacttta aaactatcta aaatctaaat taaatttttc cgttaaaatc cattttaaaa
     3361 atttttccct aacttttctc ctaacttttt attttttgtt ttaaaaagtt aggagaaatt
     3421 agcttaagga gtttatttta aatgcttaca caaaaagaca taataaaaaa gataaaaact
     3481 atttttataa gaagtttttt gtatttgatt ataaagatat ccaaaaataa gaaaattaac
     3541 aagagactaa aagtattaag gtacattgat ttgcggaaag gaaattctat cacacaaata
     3601 atcaataaga tgataaaaca tttattcaaa aatactataa ttaaagcata ttaggcatgg
     3661 ctactctttc ggttacaaga aagagacatg atgagtaaga tcattgaatt tttagttctt
     3721 gtcttagaat taattaatga gataatcaag ctcatttgat ataatcattg aaaaatttta
     3781 taaaaaccac gcttagtcta agcttaatac atttatacta aaaaacattt aaccgaaaga
     3841 gacgtggctt tcggttatga gaaattcata gcaaaaatac ttttacaaaa aaatagaaaa
     3901 gattggtaaa aaattagaaa agcaaaaaac aagattcgct ataataaaaa atccgccttg
     3961 agttttcact cttggcggaa atttatcaat caaggctaac tatgaaacga catagtaagc
     4021 gttttgtgag attatatcta aactttaggt tttttaagtt taaaatggaa gtatttttaa
     4081 caaaaccgca ggacagaaaa gccccttgcc tttgttagta catgaaacta caaattctca
     4141 ttcatttttc caagtcaaat aaaaaagaaa tccgtttcaa aacgcagctc aataatctca
     4201 gtcttaatac tttcaattaa acatacaaag acaacaagat taaaagaatt gcgatcggtt
     4261 tataagtgat acttaataaa aagtgtgtat aatacatact cataaggata ttatagtgag
     4321 taaaaaagat aaaattatta aagatttaaa aaataatcct aacaatgtgc gctttgaaac
     4381 gcttaagatt ttattagaaa gcgaaggtta tgaatgtttt aataaaggcg gatcacatta
     4441 tcaattcaag aaaagaagaa tgtgatctta ttactattcc atttaaacgc cctataaagg
     4501 ctatatatgt caaaatggtt ttaaaagcta taacaggaga atgaatgatg aaagacttag
     4561 attactatct taatctacct tatgaaatta ttataaaaaa acttgatgaa aaagatggcg
     4621 gaggatattt tgcaagatat aaagatttcc cttatattat gggagatggt gaaaatgaaa
     4681 tagaagcctt aaaagatctc aaagaagcat ttaaaggagc attagaagtt atgcttgaaa
     4741 aaggtgatta tattaaagaa cctattgata atgaagcaaa aattagaatt aatattacct
     4801 tgcctaaaag cttagtagag gcaatagata caataagcga taatagaagt aaattcttag
     4861 ctgatcttgc aaatagcgct ataaagtctt ataaaataag cacttaaaaa ttgacatagt
     4921 taaataaaaa aaagaaatcc gtttcaaacc actaaaaaat aggcatttta tagcaaaaat
     4981 actttcaaaa tttattaaaa tatggtataa ttttattaaa aatatgaata agttattagt
     5041 caaggagtaa tattatgctt tccacatact tagttgttag ctttttaata tttattgtgt
     5101 tgtttttttc aattttaagt ttttatatga tttttctaaa aaacagaaat acagaaaaaa
     5161 gggaaactaa aataattaat aaaattttat ttctcttatg ttttctctta ctaatttcaa
     5221 tttcgatttt aattggagtt tatttaggag tattaacaac tgttaaatct gtcgtaattg
     5281 cttttattgc attagttttt atattatcgt tgttttttat agctttttct gtaaattgtg
     5341 ctattttaga ttctatttta tctttaaaca aaaggctata aagccttttg tttaaataga
     5401 aggagtatct tttccaatag gattccaatt tttagaagtt tccctaatag cattacttcc
     5461 ttttttatta tcttgagcta tttgcgagtg agttgctccg cttttaactt cttgactatc
     5521 tggcattgtt gtagtgttgc ttgttctttt actactttga tttacttgat cttgatttaa
     5581 attagattga gttaaaacac ttctttctga tccatcaatg gttttaaaat tcatacctgc
     5641 agcgtgtggc atagtagtgt tatttggact aacaatgctt tgagcgccat attgactatt
     5701 atattgtgca agttgtgcag gatcattctt aaccatatcg gatacataat tatctgcttt
     5761 tgcaaagtat tcattttgtt gagctgtatt aagattgcta aagtctttat tatctccagc
     5821 agcaagatct cttgcaacca cattaagtgt attgtcaata ttattagtac taacagattg
     5881 aataccttgt tctgtttggg tatagctttg agtatatcca accatttttg aataagctgt
     5941 agaatcgcca cctgaaagcg tattactcca agaagaatcc ataccttttg tggtagatag
     6001 agttttaaga gaagctcttt ccattatttc attatatgca gctttttgag cttctgaaaa
     6061 agtttcaaca tttcctatac ctctttttga acttgcactt gattgaattt cagcaccatt
     6121 tccaagaacg ctaaaacctg catgagcaga agctgctaat gcaatttccg ccttttcttc
     6181 gctagttaaa tcagttctat tttgaatctc ttgtccaata ttatttgcaa aagccttctt
     6241 aaatgcttca tctcctttct ccataaatcc tttagcttca tttaaatgca cttgctctac
     6301 cgctttgact catatgtgaa tattgatcat taaagttttt attccaagca tcagaatttg
     6361 cttgagatac gctattaaca gttgtcatag ttcctgcgct aagtttggcg cctgacatca
     6421 taccatcaac atttgttcct gtcatatttg cattagagat ttcagaattc tttgtattat
     6481 cacccataac tgattgagta ttaaatttag taaccacacc atctatattt cttgcatatt
     6541 gaagcgatgc tacccctgca ttcatcgacc aaacttcatc tcctctagga gtagcaatgc
     6601 tagtttgtgt agataaggct tgctgatttg caaagcttcc agcagctttt gaagcacctg
     6661 ttagagcttg agataatcca gaagcaaaag ttacaaatcc ttgctcactt gctttagcta
     6721 tagcataagc taaaacagga gtactcatta caaggtaatt catgaaattt gatctatttg
     6781 ctacttcttt aaagataagc atgttatctc ctaagcttaa agctgctttt ccacctgtta
     6841 ttacttgtgc aacattcata agattaaaat catttataaa attaataata caaagtatag
     6901 gagtccaaag cactatccaa atacatagag taaaaaacat cttaatatgt gcgtaagagc
     6961 caaacacaat agaaagcaaa gcaacaagcc aagacaaacc tatgatgata gctgttaaat
     7021 aagctttagc taaaggcaaa taagtttgcg ccaagtgtcc ttgtgcttgt gcatacttgc
     7081 gtaaaattgc tgatccgcat aagcagtatt tgcagccaca gaagcaggat ttaatcctac
     7141 tgatttagcg gtattaatga ttgcattttg agaagcaagc attatcatgg attgttgcaa
     7201 ataagatcta gcacttacag cttgttcgtt atagatttgt gcagcgccta agaacttttg
     7261 ctcataattt gtcatatcat ctaccatacc aagcaaagca gcatggatct tcatagcttc
     7321 atctgtatct ttttgaatca tttcaacgat ttgaggacct gcatcagaac aaggcacaac
     7381 actttgttct tcaatattat tgttatttgt gaacaaagga gtaagctgag agccattgcc
     7441 tatgtttgtg aaaagatctt gcattaaatt atcagagttt tgaaaaagat ttctaccttg
     7501 ttgattaagc aagataccta ctgaaacgca gtttctaaag taaaaatcaa tatttttttg
     7561 caaagttgca tcaatagccg aaagctttac acttggtaaa gtactcatta cttgaagtga
     7621 aaaacctaaa cctgcattag agaaatttgt agattgtgga gttgaaaaat gtttttccat
     7681 agcttctaag ataaccttct caaattgtgt cattaatgca aagctttttc ctatacctat
     7741 aggaatttga gaaatgacat aatctttgct agtgacttca tcatgaatca tgaagcggtg
     7801 attattgtca tttggtgctt ttaaaaacat gacccacact acagcaaaaa gtacaaacat
     7861 ttttccaaat tcaaacacag ggtttgtttg tccatccatt gcttttttaa tactaaaaag
     7921 taataatgaa atagctaagg ctgcattaac gatataactt gtttcagtgg ttattccttt
     7981 aaccgcttgc atgatttcat tcattacatc gccgtaaccc caagtataaa ttagatttcc
     8041 attagctatt tcagttgcac caaataaaaa tgaaggtgca aaaaacaaag tgctaaggaa
     8101 taacaagtaa aatcttttca tggactatat taaagaagtt aaagagtttg tttggtataa
     8161 ttgcattaag ggttttgcca caaggctgca accctgtggc ataatcacac cctagaaagg
     8221 gggtgaacta tatgacacga ctcatactta taattatact aatttgtata attactgtca
     8281 aggcttatta gccttgcccc ttttcttaag gggcgaaact cccttgtgac ttaccaaaca
     8341 aacttttaac taagcttctc tcctttctaa taatttattt tcttttttaa tttgtaggtt
     8401 ttttcgttac attctcgata ttgttttgaa tcttttcttg tattttcaca gaatcagctt
     8461 gtatttttcc tgtgtcaaaa cttcctacaa tatcagcaat gaattcactt aaatcaattt
     8521 cgctaaaatc taatttttga aattcttcag gagtgaagcc tttgcattgc ggaccttccg
     8581 cactactcca cccttttcca agctgagggc gtccttgttc attgaaaatt cttcctaatt
     8641 tagaattgaa gcaacaaaaa cttttctttt ttcaacgcaa attttagtaa aacctaaact
     8701 aaccttttta gaacaataag ttcctacttc atgacatttt cctgcatcgt ttaatttagc
     8761 aagctttttc ttatcttctt tacaaggtac aaatcctaaa aatacattat ccttatcaca
     8821 acatccacca ccaagtaaac cgccaaacat atcccaattt ttacaacgat tatcttgtcc
     8881 attgaatatt tatagatact gaactatttg aaaccttatt attaaaaaat acaaaatcag
     8941 cgcaaatgtg aaaaaaccgc tatacaacct taaagaaatt gaaaaaaata atttcaaatt
     9001 caaatgatgc acagtgaaaa taagaaaagc aataagataa actttcaaaa taaatctgtc
     9061 ttattgcgtg aatattaaaa ataaaaataa ctaaagcaga tgatctccgc ctaaataagt
     9121 ttaaaaatat tcaaaaatta aaaacaaaag ctatattaat ttattgtttt tatatcattc
//
LOCUS       DAPWGO010000063         8203 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.064, whole genome shotgun sequence.
ACCESSION   DAPWGO010000063 DAPWGO010000000
VERSION     DAPWGO010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8203
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.064"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            5..1072
                     /locus_tag="RJ336_001306"
     CDS             5..1072
                     /locus_tag="RJ336_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HDZ5213750.1"
                     /translation="MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIVFQLK
                     QFNIQSNQIKTLFIGGGTPSCVDAYNYEDIFKILYPLLDKNVEISCEANPNSATLNWL
                     KNMKNLGVNRISFGAQSFHPKKLHFLGRIHNQEMIIKALENANKVGFKNINLDLIYDT
                     KLDNKKMLEFELLHLKQIKALITHLSAYNLTIESNTAFAKKEHFKKNAPNLMKFFIKQ
                     LLELDFFQYEISNFSKTKSQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKN
                     YIENPTFRSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQWQKDKINILLKEKKLFYK
                     NKRYFNPNFLISDELALYLSS"
     gene            1131..1538
                     /gene="tatB"
                     /locus_tag="RJ336_001307"
     CDS             1131..1538
                     /gene="tatB"
                     /locus_tag="RJ336_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HDZ5213751.1"
                     /translation="MSFGEIIVILVVAILVLGPDKLPEAIVQIAKILKAVKRNIDDAK
                     SSIEKEIRINDLKEEAKKYKDEFSSTNENIRKKLSFEEFDDLKRDILDKTKVDLTFDS
                     RDDNTKNNLSGQNLNTEEKPNLSKLETQDKTEK"
     gene            1539..2276
                     /gene="tatC"
                     /locus_tag="RJ336_001308"
     CDS             1539..2276
                     /gene="tatC"
                     /locus_tag="RJ336_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDZ5213752.1"
                     /translation="MFEELRPHLIELRKRLFISVACIVVMFIVCFALRSYILDILKAP
                     LIAVLPEVAKHVNVIEVQEALFTAMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKR
                     LVVPFVSFASIMFALGACFCYFVVVPLAFKFLINFGLNEDFNPVITIGTYVDFFTKVV
                     VAFGLAFEMPVIAFFFAKIGLIDDSFLKRHFRIAILVIFVFSAFMTPPDVLSQFLMAG
                     PLCGLYGLSILIVQKVNPAPKDKESDE"
     gene            2269..3297
                     /gene="queA"
                     /locus_tag="RJ336_001309"
     CDS             2269..3297
                     /gene="queA"
                     /locus_tag="RJ336_001309"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDZ5213753.1"
                     /translation="MNKDLLLSSYDYTLANELIANYPTNPKEDARLLVFDRKNKEIFH
                     TTFKNLQDFLPNCAIFFNDTKVIKARIYGNKVSGGKIELFLHQPFLNSHNPLFLAQIK
                     GRVKKDEILYFKKDLKIRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPP
                     YIKREDEKSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIYHLTLHVGAG
                     TFKSVECENIQEHKMHSEFFNIPQQACEIIDSKQAILGVGTTVTRTIEYYARTKTKSG
                     FCDLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYS
                     YGDAMLIL"
     gene            complement(3286..4251)
                     /gene="lpxD"
                     /locus_tag="RJ336_001310"
     CDS             complement(3286..4251)
                     /gene="lpxD"
                     /locus_tag="RJ336_001310"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDZ5213754.1"
                     /translation="MKLSEIAEFLSLEYKGEDIEISALNSLLKANFTELTYCDGEKNT
                     KDIPHTGAAAILVSKEYENLVPKDTKALITQSPHLSFAFLSKLFAKPLISTAKEKVQN
                     IAKSARIMPNVYIGDNVNIGENVIIMAGAYIGDNVSIGDESIIHPNVVIYNDTKIGKK
                     CHLLANCVIGSDGFGYAHNKNGEHYKIYHNGNVVLEDFVEVGACTTIDRAVFDSTIIK
                     AGTKVDNLVQIGHNCNIGQNCIIVAQTGISGSSELGRNVIMGGQSATSGHLKIGDFST
                     IAARGGVSKNLEGGRVYGGFPIMLQKDWLKLQAKIAIKFKEKSQD"
     gene            complement(4248..4712)
                     /gene="ilvN"
                     /locus_tag="RJ336_001311"
     CDS             complement(4248..4712)
                     /gene="ilvN"
                     /locus_tag="RJ336_001311"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDZ5213755.1"
                     /translation="MRRVLSVIVLNEHGVLSRIVGLFSGRGYNIDSLTVAPLENKEFS
                     RINIVTSGNERTFEQIVKQLHKLIPTYKVIESEEFIDKEMALVKIPLNENLGGLDAVL
                     KAYNGTIANSNENFLFLMVADDANRIDNFLKTIKKYNPSDIVRSGSVLMEIK"
     gene            complement(4709..6409)
                     /locus_tag="RJ336_001312"
     CDS             complement(4709..6409)
                     /locus_tag="RJ336_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HDZ5213756.1"
                     /translation="MKELSGSAMICEALKEENVKIVFGYPGGAALNIYDEIYNQKYFK
                     HILVRHEQAALHATDAYARMSGEVGVAIVTSGPGFTNTITGLATAYSDSIPLVLISGQ
                     VANSLIGTDAFQEIDAVGISRPCVKHNYLVTCIEEFPRILKEAFYIARSGRPGPVHID
                     VPKDVSATLGLWEYPKEISMKTYKPVYKGNSKQIKKFAELLKEAKRPLFYLGGGCISS
                     NASEQIRELVKFTKIPAVETLMALGTLRSDDVFNLKMAGMHGSYAANMALSECDLLVS
                     VGARFDDRITGKTSEFAKHATIVHVDIDPSSISKIINAHYPIVGDIKEVLKELLEELK
                     KENFNTTFKEWHETLKRYNELYPLSYEDSNEILKPQWVIEECAKMAPDARIITDVGQH
                     QMWVAQFYPFNYPRQLATSGGQGTMGYSLPAALGAKLAVGEEVVINFVGDGSVLMNIQ
                     ELMTAYEYGIKTINIILNNAFLGMVRQWQSMFYKEHFSQTDLSTQPDFIKIAQGFGCE
                     GYEISNKEEFIQAFSQALKSDKTSLLNVKIDRFEDVLPMVPAGGAIYNMILPKAKDRQ
                     "
     gene            complement(6427..6870)
                     /locus_tag="RJ336_001313"
     CDS             complement(6427..6870)
                     /locus_tag="RJ336_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HDZ5213757.1"
                     /translation="MTLKEQILNDIKEAMKQKDDFKRDSLRTLNAAFKQIEVDERIEL
                     DNERIYKIIASEIKKRKDAIELYLKANREDLAQKEQNEISLFEIYLPKQLSDEELTLA
                     LKQLIEELGVSSLKEQGLVMKEAKIKLGASVDGKRLNLALKELLQ"
     gene            complement(6882..7901)
                     /locus_tag="RJ336_001314"
     CDS             complement(6882..7901)
                     /locus_tag="RJ336_001314"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3,4-dihydroxy-2-butanone
                     4-phosphate synthase/GTP cyclohydrolase II"
                     /protein_id="HDZ5213758.1"
                     /translation="MKFVSVEQAIKDLQAGKMLVMVDAEDRENEGDLIFPAQFSTQEK
                     VNFMIKEARGVVCVALDETLAKKFELPLMVPKNTSNHETAFTITVDAKDATTGVSAYE
                     RNMTIQIFADDNAKASDFVRPGHINPLIAKKGGVLERTGHTEGTVDLCKLAGLKGACV
                     ICEIVKDNGDMARREDLEIFCQKHDLNMIAVSDLIEYRLKHESLIKLEEKSQSVLAGF
                     KAEKFIFSDHNQTQHIAFCFKDIKKCENVKFHISGSDFELLTSDKFSKLLEQIKFLSE
                     NGGVIVFMQGEKSSTTQYKNYGIGAQILRYFGIEEIKLLSQSCDKDYIGLEGFGLNLK
                     ACNFN"
     gene            7994..8068
                     /locus_tag="RJ336_001315"
     tRNA            7994..8068
                     /locus_tag="RJ336_001315"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8026..8028,aa:Gln,seq:ttg)
     gene            8103..8178
                     /locus_tag="RJ336_001316"
     tRNA            8103..8178
                     /locus_tag="RJ336_001316"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8136..8138,aa:Met,seq:cat)
BASE COUNT         2734 a         1486 c         1112 g         2871 t
ORIGIN      
        1 ttttatgcat ttttatattc atattccatt ttgtgaaagc aaatgtaatt attgcgcttt
       61 tacaagtttg aaaaaaaatg attatgaaaa agcctatttt aaggctttaa aagaagatat
      121 tgtttttcaa ttaaaacaat ttaacattca atcaaatcaa attaaaacct tatttatagg
      181 cggaggaaca ccaagttgtg tcgatgcgta taattatgaa gatattttta aaattttata
      241 tcccttacta gataaaaatg tagaaatttc atgcgaagcc aatcccaact cagcaacatt
      301 aaattggctt aaaaatatga aaaatctagg agttaatcgc atttcttttg gagctcaaag
      361 ttttcatcct aaaaaacttc actttcttgg aagaattcac aatcaagaaa tgattatcaa
      421 agcattagaa aatgcaaata aagtaggttt taaaaatatc aatttagatc ttatttatga
      481 tacaaaatta gacaataaaa aaatgcttga atttgaactc ttacacttaa aacaaatcaa
      541 ggctttaatc acacacctta gtgcttataa tttaaccata gaatcaaaca cagcctttgc
      601 caaaaaagaa catttcaaaa aaaatgctcc taatttaatg aaatttttta tcaaacaact
      661 tctagagctt gacttttttc aatatgaaat cagtaatttt tcaaaaacta aatctcaaat
      721 ttgcaagcat aatcttgctt attggcaagg aaaaaactac ctagcttgtg gattaagtgc
      781 agtaggattt tatgaaaata agcgttttta tacagcaaaa aatttaaaaa attacataga
      841 aaatcctact tttagatcta tagagcaact aagctctaaa gacttgaatt tagaacacct
      901 atttttagga cttagaagta tagtagggat tgatgaaaca aaactcaatc aatggcaaaa
      961 agacaaaata aatatattat taaaagaaaa aaaacttttt tacaaaaata aaagatattt
     1021 taatcctaat tttctcatta gcgatgaact tgctttatat ctctcatctt aaatttaagt
     1081 tttttaagta aaatatttat ttaaaatatc aaattaaaga gtaacgatta atgagttttg
     1141 gtgaaattat agttatttta gttgtagcga ttttagtctt agggcctgat aaacttccag
     1201 aagctatagt acaaatagca aaaattctaa aggctgtaaa acgcaacata gatgatgcaa
     1261 aatcaagcat agaaaaagaa atacgcatca atgacttaaa agaagaagct aagaaataca
     1321 aagatgaatt ttcaagcact aatgaaaata tacgcaaaaa actcagtttt gaagaatttg
     1381 atgaccttaa aagagatatt ttagataaaa caaaggtaga tttaaccttt gatagcagag
     1441 atgataacac aaaaaataac cttagcggac aaaatttaaa tacagaagaa aaaccaaatc
     1501 ttagcaaatt agaaacacaa gataaaacgg aaaaataaat gtttgaagaa ttaagacctc
     1561 atttaataga acttagaaaa cgccttttta taagcgttgc ttgcattgta gttatgttta
     1621 ttgtatgttt tgctctacga agctatatct tagatattct aaaagctcca cttatagctg
     1681 ttttacccga agtagccaaa catgtgaatg taattgaagt acaagaagcc ttatttaccg
     1741 caatgaaggt tagttttttt gcagccttta tcttttctct acctgtaatt ttttggcaat
     1801 tttggaaatt tgtagctcca ggactttatg ataatgaaaa acgccttgtg gtgccttttg
     1861 ttagctttgc aagcattatg tttgccttgg gggcttgttt ttgctatttt gttgtagtgc
     1921 ctttggcttt taaatttttg attaattttg gtttaaatga agattttaat cctgtgatta
     1981 ccataggaac ttatgtagat ttttttacca aagttgttgt ggcttttggc ttagcttttg
     2041 aaatgcctgt aattgccttt ttctttgcta aaattggact tatagatgat agttttttaa
     2101 aacgccattt tcgcatagct attttagtta tttttgtttt ttcagccttt atgactccac
     2161 ctgatgtttt atctcaattt ttaatggcag gaccactttg cggactttat ggactttcta
     2221 ttttaattgt tcaaaaggta aatcctgctc caaaagataa agaaagtgat gaataaagac
     2281 ttacttcttt caagctatga ttacactcta gctaatgaac tcatagccaa ctatcctaca
     2341 aatccaaaag aagatgctag gcttttggtt tttgatcgca aaaacaaaga aatttttcat
     2401 actactttta aaaatttaca agacttttta cccaactgcg cgattttttt caatgatacc
     2461 aaagttatta aagcaagaat ttatggcaat aaagtaagcg gaggaaaaat agagcttttc
     2521 ttgcatcagc cttttttaaa ttctcacaat ccactttttc tagctcaaat taaagggcgt
     2581 gttaaaaaag atgaaatctt atattttaaa aaggatttaa aaatacgcgt tgtagaactt
     2641 ttaaatgatg gtcttcgaaa agttcaattt tttcaaaatg ataaaacctt agacacctca
     2701 aatctttaca acctgcttga caagatagga catataccct tgcctcctta tattaaaagg
     2761 gaggatgaaa aaagcgattt aaaagattat caaagtatct ttgcaaaaaa tttaggcgca
     2821 gtggctgctc cgactgcaag tttacatttt agtgagacta tgcttgaaaa tttaagaaaa
     2881 aaacacgaaa tttatcattt aaccttgcat gtaggagctg gaacctttaa aagcgtggaa
     2941 tgcgaaaata tacaagagca taaaatgcat agtgaatttt ttaatattcc gcagcaagca
     3001 tgtgaaatta tagattctaa acaagctatt ttaggcgtag gaacaacggt aacaagaacc
     3061 atagaatatt atgcaagaac taaaacaaaa agcggttttt gcgatctttt tttacacccg
     3121 caaaatccac ctataagaca aaatcatctt ttaaccaatt ttcatttacc aaaatctact
     3181 cttatcatgc tagtttcagc ttttatcggt agagaacagt gtttaaaact ttatgaactc
     3241 gccataaaag aaaaatatcg cttttactct tatggcgatg cgatgttaat cttgtgattt
     3301 ttctttaaat tttattgcta ttttagcttg aagttttagc caatcttttt gaagcatgat
     3361 aggaaaacct ccataaacac gcccgccttc taaattttta ctcacaccac ctcttgcagc
     3421 tatagtgcta aaatcgccta tttttaaatg tccactcgtt gcactttgac cacccataat
     3481 aacattgcgt cctaactcac ttgaacctga aattccagtt tgcgccacaa tgatgcaatt
     3541 ttgacctata ttgcaattat gtccgatttg aactagattg tctaccttag tacctgcttt
     3601 gataatagta ctatcaaaaa ctgctctatc tatagttgta caagccccca cttctacaaa
     3661 atcttctaaa accacattac cattatgata aattttataa tgttcgccgt ttttattgtg
     3721 cgcataacca aaaccgtcac ttcctattac acaattggca agcaaatgac attttttacc
     3781 gattttagtg tcattataaa tcactacatt aggatggata atactctcat caccaatgct
     3841 gacattatcg cctatataag ctcctgccat aataattaca ttttcaccga tatttacatt
     3901 atcgcctata taaacattag gcatgattct tgcgcttttt gcgatatttt gtactttttc
     3961 tttagctgtg cttatcaaag gtttagcaaa aagcttgctt aaaaaagcaa aactcaaatg
     4021 tggactttga gtaatcaaag ctttagtatc tttaggtact aaattttcat attctttaga
     4081 tactaaaata gcagcagctc ctgtgtgagg tatatctttg gtatttttct caccatcaca
     4141 ataagtaagc tctgtaaaat ttgctttcaa taaagaattt aaagcactga tttctatatc
     4201 ctcgccttta tattccaagc ttaaaaattc tgctatttca cttaatttca tttaatctcc
     4261 atcaaaacag atccactgcg aactatatca ctaggattgt attttttaat tgtttttaaa
     4321 aaattatcaa ttcgatttgc atcatcagca accattaaaa acaaaaaatt ctcattgcta
     4381 tttgcaatag taccattata agctttcaaa acggcatcaa gtccacctaa attttcattt
     4441 aaaggaattt tcaccaaagc catttctttg tcaataaatt cttcgctttc tatcacttta
     4501 taagtaggaa taagcttatg aagttgtttg actatctgct caaaagttct ttcatttcct
     4561 gaagtgacta tattaatacg agaaaattct ttattttcca aaggtgctac tgtaagcgag
     4621 tcaatattat aacctcttcc tgaaaaaagt cctactatac gagataaaac cccatgctca
     4681 tttaaaacaa ttaccgataa aacccttctc attgtctatc ctttgccttt ggtaaaatca
     4741 tattataaat cgcacctcct gcaggcacca taggtaaaac atcttcaaag cgatcaattt
     4801 ttacatttaa aagagaggtt ttatcacttt ttaaagcttg gctaaaagct tgaatgaatt
     4861 cttctttgtt tgaaatttca taaccttcac aaccaaaacc ttgagctatt ttgataaaat
     4921 caggctgagt gcttaaatca gtttgtgaaa aatgctcttt ataaaacata ctttgccatt
     4981 gtcttaccat acctaaaaag gcattattta aaataatatt tatagttttt ataccatact
     5041 cataggcagt cataagctct tggatattca tcaaaaccga tccatcacct acgaaattaa
     5101 tcaccacttc ttcacccaca gcaagttttg cacccaaagc cgcaggtaaa gaatatccca
     5161 tagttccttg ccctccactt gttgcaagtt gtcttggata attaaaagga taaaactgcg
     5221 ccacccacat ttgatgctga cccacatcag taataatcct tgcatctgga gccattttcg
     5281 cacattcttc aatcacccat tgcggtttta aaatctcatt gctatcttca taagaaagcg
     5341 gataaagttc attataacgc tttaaagttt cgtgccattc tttaaaagtt gtgttgaaat
     5401 tttccttttt aagctcttct aaaagctctt taagaacttc tttaatatct cctactatag
     5461 gataatgcgc attgataatc tttgaaatag aactaggatc aatatcaaca tgaactatag
     5521 tcgcatgttt agcaaattca cttgtttttc ctgtaatcct atcatcaaat ctcgctccta
     5581 cactcacaag caaatcacac tcacttaaag ccatattagc agcatagctt ccatgcatgc
     5641 ctgccatttt aagattaaaa acatcatcac ttcttaaagt tccaagcgcc atcaaggttt
     5701 caactgctgg aatttttgta aattttacaa gctctctgat ttgctcactt gcattagaac
     5761 tgatacatcc tccacccaag taaaacaaag gtctttttgc ttcttttaaa agctctgcaa
     5821 attttttaat ttgctttgag ttacccttat aaacgggctt ataagttttc atagaaattt
     5881 ctttaggata ttcccaaagt cccaaagttg cacttacatc ttttggcaca tctatatgca
     5941 caggcccagg tctaccactt cttgctatat aaaaagcctc ttttaaaatg cgtggaaact
     6001 cttctatgca agtaactaaa taattatgct tcacgcaagg tcttgaaatg cctactgcat
     6061 caatttcttg aaaagcatct gtaccaataa gagaatttgc cacctgccct gaaatcaaca
     6121 ccaaagggat agaatcacta taagccgtag ctagacctgt aatagtattt gtaaaacctg
     6181 gtccgcttgt aactatagct acgcccactt ctccactcat tcttgcataa gcatcagtag
     6241 catgcaaagc tgcttgttca tgacgcacta aaatatgttt aaagtacttt tgattgtaaa
     6301 tttcatcata aatattaagc gcagcgcctc caggataacc aaaaacaatt ttaacatttt
     6361 cttcttttaa agcctcgcaa atcattgctg aaccgcttaa ctctttcata ataacactcc
     6421 aaaaaattat tgtaaaagct ctttaagtgc taaattaagt cttttgccat caacactcgc
     6481 acctaatttt attttagctt ctttcattac caaaccttgt tcttttagtg aacttacacc
     6541 caattcttct ataagttgtt ttaaggctaa agttaactcc tcatcactta gttgtttagg
     6601 caaataaatt tcaaaaagac ttatttcatt ttgttctttt tgtgctaaat cttcacgatt
     6661 tgccttaaga taaagttcga ttgcgtcttt gcgttttttg atttcacttg caatgatttt
     6721 ataaattctt tcattatcta attctattct ttcatccact tctatttgct taaaagctgc
     6781 atttagagtt cttaaactat ctcttttaaa atcatctttt tgtttcattg cctctttgat
     6841 atcgtttaaa atttgttctt ttaaagtcat ttttttcctt tttagttaaa attacaagct
     6901 ttaaggttta aaccaaaacc ttctaagcct atatagtctt tatcacaact ttgagataaa
     6961 agtttaattt cttctatacc aaaatatctt aaaatctgtg ctcctatacc atagtttttg
     7021 tattgagtgg tactggattt ttctccttgc atgaaaacta taacgccacc attttcacta
     7081 agaaatttga tttgctctaa aagttttgaa aatttatctg aagttaaaag ctcaaaatca
     7141 ctaccactga tatgaaattt aacattttca cattttttaa tatctttaaa gcaaaaagct
     7201 atgtgttggg tttgattatg atcgctaaag ataaattttt ctgctttaaa gcctgctaaa
     7261 acactttgac ttttttcttc aagcttaata aggctttcat gttttaggcg atattctata
     7321 agatcgctta cggctatcat gtttagatca tgtttttggc aaaaaatttc tagatcttct
     7381 cttcttgcca tatctccatt atcttttacg atttcacaaa tcacacatgc accttttaat
     7441 cctgctaatt tacaaagatc aaccgtgcct tctgtatgac ctgtgcgttc taaaacccca
     7501 cctttttttg cgattaaagg attgatatgc cctggtctta caaaatcact cgctttagca
     7561 ttatcgtcag caaaaatttg tatagtcata tttctttcat aagcactaac tcctgttgta
     7621 gcatcttttg catctacggt tatggtaaaa gcagtttcgt ggtttgaagt atttttaggc
     7681 accattaaag gaagttcaaa tttttttgcc aaagtttcat ctaaggctac acaaaccaca
     7741 ccacgagctt cttttatcat gaaatttact ttttcttgag tgctaaattg cgcaggaaag
     7801 attaaatcgc cttcattttc tctatcttct gcatctacca taacaagcat ttttcctgct
     7861 tgtaaatcct taatcgcttg ttctacgcta acaaatttca tttttatttc cttaaaattt
     7921 ttaaaattat aacttaaatt gcttgacaaa taaattaaaa ttcattataa tcacactttt
     7981 aaaaaatatt tattggggta tcgccaagcg gtaaggcaac aggttttggt cctgtcattc
     8041 aggggttcga atccctttac cccatccact tcttatttta tatttcaaag tatcttatat
     8101 gccgcgaagt agagcagtgg ttagctcgtc gggctcataa cccgaaggtc gggagttcaa
     8161 atctcccctt cgcaaccagt tatggattta aaataaattt tat
//
LOCUS       DAPWGO010000064         7974 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.065, whole genome shotgun sequence.
ACCESSION   DAPWGO010000064 DAPWGO010000000
VERSION     DAPWGO010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7974
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.065"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            14..1234
                     /locus_tag="RJ336_001317"
     CDS             14..1234
                     /locus_tag="RJ336_001317"
                     /inference="COORDINATES: protein motif:HMM:NF019310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ5213759.1"
                     /translation="MEKSLLFHFRRIGVEFIIFSVYAVFSISWAATGSLMPLISNDLA
                     LNTQQATLITSMIVVAKIFGASFTAFLVYKFGLKKGYFLGCILMSSGIFLSFVDSYSG
                     ILVIRFLTGLGSACALVCLVPIAQQWFEKKALHFVISFNITSNLVGITLGLILAESIS
                     NYFGNWRDSLSFYAWINLILLILWLFVGKDENKKEEKKNNAKDLIYALKSRVTWGMII
                     FYIGPILFLNSLFTFLPTFYAQYAGFSKELADFAKKEIPALANFAIIFGPYLGLFFKR
                     KNISFKIMLLSGGACIFICGFCMLFLQNLVLIQIFAVLSGIFYSMWFPFFFNLPSELK
                     NSNPNQTAYIMSAFWSITFVILSFNLWVVSWSVDKTHSFTLGFVYIFALIFISAILAQ
                     FVLPRRENFIQGEK"
     gene            1236..2387
                     /locus_tag="RJ336_001318"
     CDS             1236..2387
                     /locus_tag="RJ336_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDZ5213760.1"
                     /translation="MNLIPEILDLQGEFEKIRHQIHENPELGFDELCTAKLVVQKLKE
                     FGYEVYEEIGKTGVVGVLKKGNSDKKIGLRADMDALPLQECTNLPYKSKKENVMHACG
                     HDGHTTSLLLAAKYLASQNFNGTLNLYFQPAEEGLGGAKAMIEDGLFEKFDSDYVFGW
                     HNMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGHGSAPEKAKDPIYAASLLVVALQS
                     IVSRNVDPQNSAVVSIGAFNAGHAFNIIPDIATIKMSVRALDNETRKLTEEKIYKICK
                     GIAQANDIEIKINKNVVAPVTMNNDEAVDFASEVAKELFGEKNCEFNHRPLMASEDFG
                     FFCEMKKCAYAFLENENDIYLHNSSYVFNDKLLARAASYYAKLALKYLK"
     gene            complement(2391..3131)
                     /locus_tag="RJ336_001319"
     CDS             complement(2391..3131)
                     /locus_tag="RJ336_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaaA family protein"
                     /protein_id="HDZ5213761.1"
                     /translation="MKILFSPSESKNENCVKNPINENSFIFKELFPYRMEALKHYEEF
                     IKNASLQNLQELFGIKNENEIDKFKHDLKQAPTQEAILLYTGVSYEYLNFKALDKKSQ
                     AYILENTLIFSNLFGVVRANDTLPFYKFKQGAKIGNFAIEKFYKEHFSKALDEYLENE
                     EILDLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKEL
                     LANLPSNLKLKEIQIKGLKEEIVLEILD"
     gene            complement(3222..4340)
                     /locus_tag="RJ336_001320"
     CDS             complement(3222..4340)
                     /locus_tag="RJ336_001320"
                     /inference="COORDINATES: protein motif:HMM:NF027978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213762.1"
                     /translation="MKKGIFLSIGIAVLFSACGNSIDEKTVKKYENQLNQTVKQEIAS
                     LSQDSGIKIEFSDFKCNADGDFIACLSSNFKTLAKDNKDEYQELFQAKNIKIRSNEIY
                     KGEANASISIKEYYNDLFKNQKSIQSNLVFENFKLGEKVVSDINASLFQQDPKISSFI
                     NKLSSDSYTLSFDNSINKQENNYLDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKG
                     IKFNTQTLAMDEQAINELLNMANYEQASDFSNTIQKYIILNNFKIDSTLKTEGVFSSY
                     IATAKENLQTLKAQSQNEEQALIFDKALAILNNITQNDDYKLNLDLKFKNIPVSDYST
                     QGIDSIEKLSINNQDATEALKIILPFIMFSMLMGGASF"
     gene            4559..5398
                     /locus_tag="RJ336_001321"
     CDS             4559..5398
                     /locus_tag="RJ336_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDZ5213763.1"
                     /translation="MKKILLSVLTAFVVVVLAACGGNSDSKTLNSLDKIKQNGVIRIG
                     VFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKV
                     DIILANFTQTPQRAEQVDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTAD
                     AYFTQNYPDIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKDHPDFKMAIKELG
                     NKDVIAPAVKKGDKELKEFIDNLIIKLGQEQFFHKAYDETLKAHFGDDVKADDVVIEG
                     GKI"
     gene            5439..6686
                     /locus_tag="RJ336_001322"
     CDS             5439..6686
                     /locus_tag="RJ336_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ5213764.1"
                     /translation="MQKKYKNIIYASLGGILEFYDFVLFAFFLDIFAKVFFPQNDAFW
                     MQINAYIAFGAAYLARPFGSIVMAHFADRYGRKNIFYISMLLMVLPSFALAFLPSYES
                     IGIFATLILFTIRILQGLAVGTEVSGAWIYVSEFVKGRQIPLALGFISATLTIGLLLG
                     NIATLGIRSYFTPEEVQSYAWRIPFIIGGFFGILALFLRNKLSETPEFVKVQNEKKIL
                     SFPLFEALKTHKMSMLVCFLMTMVLTSGVATLMILPKYFESLLAMSKTSALWVQNFAI
                     LAVIFGALFQGFLASKWGSYRICSIFSIAFIIFGMLFSFYDEKFLFYFLLACFTQGII
                     TFAPVFMTQIFKSELKFSGLSFAYNISYAILGFLTPFVVNAFYKEYLGIYLAIVGSCS
                     LFCVFLLKRVFARSKIKELSIVF"
     gene            complement(6669..7937)
                     /locus_tag="RJ336_001323"
     CDS             complement(6669..7937)
                     /locus_tag="RJ336_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HDZ5213765.1"
                     /translation="MQNVIENFKQLCKIPHCSYETEQMKEFLSSYAKDKGFKVSVDKA
                     GNIRAIKGKPKICLQSHYDMVCMGDAPNLEVYEENGFLRAKNSSLGADNGIGIAIMMS
                     AMAEFKNLECLFTNDEEVGLMGVNSLEHTLESKMLLNLDHESDDEIMIGCAGGVDIEA
                     SLPFNTLRKKGKIYELYAQNFKGGHSGINIVRNEKSSIKEMAKFIQENKGEIISFEGG
                     ERINSIPKHAKALVHFKNEVKSNNWIKCDFKEEGEFEICDQSNKLLSLINSFTHGVRA
                     YDENLGIVQTSINLATLRMQDKQIKFALFARSNILDGLKQVEFETLEFFKAFDFKVRS
                     FNFYPPWEGKPNALSDMVFKALKKISPNAKVSAIHAGLECGIIEKKQELLCASIGPNI
                     HNPHSTDEHCEIASVEKISKVVFEVLKDNA"
BASE COUNT         2450 a         1048 c         1357 g         3119 t
ORIGIN      
        1 aaaggatttt aatatggaaa aatcactttt atttcatttt agacgcattg gagttgaatt
       61 tataattttt agtgtttatg ctgtttttag tatctcttgg gcagcaacag ggtctttaat
      121 gcctttgatt tcaaatgatc ttgccctaaa tactcagcaa gctactttaa tcactagcat
      181 gatagtagtt gcgaaaattt ttggtgcttc atttactgct tttttggttt ataaattcgg
      241 attaaaaaag ggatattttt taggctgtat tttaatgagt tcgggtatct ttttaagttt
      301 tgtagatagt tatagtggta ttttggttat aagattttta acagggcttg gttcagcttg
      361 tgctttagtt tgcttagtgc ctattgcaca gcaatggttt gaaaaaaaag ctttgcattt
      421 tgtaattagt tttaatataa cttcaaattt agtaggcatt actctaggac ttattttagc
      481 tgaaagtatc tcaaattatt ttggaaattg gagagattct ttatcatttt atgcttggat
      541 taatttgatt ttattgattt tgtggctttt tgtaggtaaa gatgagaata aaaaagaaga
      601 aaaaaagaat aatgcaaaag atcttattta tgctctaaaa tctcgtgtta cttggggtat
      661 gattattttt tacatagggc ctattttatt tttaaattct ctttttactt ttttaccaac
      721 tttttatgca caatatgcag gttttagtaa agaattagct gattttgcta aaaaagaaat
      781 tccagccttg gctaattttg ctattatttt tggtccttat cttggattat tttttaaaag
      841 aaaaaatatt tcttttaaaa taatgctatt gtctggagga gcgtgtattt ttatatgcgg
      901 attttgtatg ttgtttttac aaaatttagt attgatacag atttttgctg tgttatcagg
      961 cattttttat tctatgtggt ttccattttt ctttaatcta ccttcagaat taaaaaattc
     1021 caacccaaat caaactgctt atattatgag tgctttttgg agtattacct ttgttatact
     1081 atcatttaac ctatgggtag tatcttggag tgttgataaa acccatagtt ttactttggg
     1141 ttttgtttat atttttgctt tgatttttat ttcagcgatc ttagcacaat ttgttttacc
     1201 tagaagagaa aattttatac aaggagaaaa atagaatgaa tttaattcca gaaatactag
     1261 acttacaagg cgaatttgaa aaaattcgtc atcaaattca tgaaaatcct gagcttggtt
     1321 ttgatgaatt atgtactgca aaattagtgg tgcaaaaatt aaaagaattt ggttatgagg
     1381 tttatgaaga aataggaaaa acaggtgttg tgggggtttt aaaaaaggga aatagcgata
     1441 aaaaaatagg acttcgtgca gatatggatg ctttgccttt acaagaatgc acaaatttgc
     1501 cttataaaag caaaaaagaa aatgtaatgc atgcttgcgg tcatgatgga catactactt
     1561 ctttattgct tgctgcaaag tatttagcaa gtcagaattt taatggcact ctaaatcttt
     1621 attttcaacc tgctgaagag ggtttgggtg gtgctaaggc aatgatagaa gatggattgt
     1681 ttgaaaaatt tgatagtgat tatgtttttg gatggcacaa tatgcctttt ggtagcgata
     1741 agaaatttta tcttaaaaaa ggtgcgatga tggcttcttc ggatagttat agcattgaag
     1801 ttattggaag gggtggtcat ggaagtgctc cagaaaaggc aaaagatcct atttatgctg
     1861 cttctttgct tgttgtggct ttacaaagca tagtatctcg caatgttgat ccccaaaatt
     1921 cagcagttgt aagcatagga gcttttaatg caggacatgc ttttaatatc attccagata
     1981 ttgcaacgat taaaatgagt gttagagcat tagataatga aactagaaag ctaactgaag
     2041 aaaaaattta taaaatttgt aaaggtattg cacaggctaa tgatatagag attaaaatca
     2101 ataaaaatgt tgttgcacca gtgactatga ataacgatga agctgtggat tttgctagtg
     2161 aggttgcaaa agaattattt ggcgaaaaaa attgtgaatt taatcatcgt cctttaatgg
     2221 caagtgagga ttttggattt ttttgcgaaa tgaaaaaatg tgcctatgct tttttagaaa
     2281 atgaaaacga catttattta cataattcta gttatgtttt taatgataag cttttagcta
     2341 gggctgcaag ttattatgcg aagctagctt taaaatactt aaaataaaaa ctaatctaga
     2401 atttcaagca caatttcttc ctttaaacct ttgatttgaa tttctttgag ttttaggttt
     2461 gaaggaaggt ttgctaaaag ctctttattg ttttttactt ggttttttgc acttatggag
     2521 agtaaaattc ctctataagc tttagcaaaa tgactgatga ctttaccatt ttttacaaat
     2581 ttataagtat aaaatttctt ttttggagta taaaatttat cataaaatcc tgctctaagg
     2641 tcaagtattt cctcattttc taagtattca tctaaggctt tactaaaatg ttctttataa
     2701 aatttctcta tggcaaaatt tcctatttta gccccttgct tgaatttata aaagggtagg
     2761 gtatcattag ctcttacaac gccaaaaaga ttagaaaata taagagtatt ttctaaaata
     2821 taagcttggc tttttttatc taaggcttta aaattaagat attcataact taccccagta
     2881 taaagcaata tagcttcttg ggtgggagct tgttttaagt cgtgtttaaa tttatcaatt
     2941 tcattttcgt ttttaatgcc aaaaagttct tgtaaattct gtaaacttgc atttttgata
     3001 aattcttcat aatgctttaa agcttccatt ctataaggaa ataattcttt aaatataaat
     3061 gagttttcat tgataggatt ttttacgcaa ttttcatttt tgctttcact aggggagaat
     3121 aaaattttca ttttagcctt ttttgttaat gttatgaaac attaagagca aagaatttaa
     3181 tcttgctttt aatgtttttg aagtttttat cattttaaaa tttaaaatga cgctccgccc
     3241 attaacatgg aaaacatgat aaatgggagt ataattttta acgcttctgt ggcgtcttga
     3301 ttgttgatgc ttagtttttc tatactgtcg attccttgtg tgctatagtc actaacaggg
     3361 atgtttttaa attttaaatc aaggttgagt ttataatcat cattttgagt gatattgttt
     3421 aaaatagcta aagctttatc aaagattaat gcttgttctt cattttgact ttgagctttt
     3481 aaggtttgta gattttcctt agcagttgct atatagctac taaatacgcc ttcagtttta
     3541 agagttgaat caattttaaa attatttaag atgatgtatt tttggattgt attgctaaaa
     3601 tctgaagctt gttcgtagtt tgccatatta agaagttcat tgatagcttg ttcatccata
     3661 gctaaagttt gagtgttaaa ttttataccc ttagaatcaa ggtaattaag taaatcttct
     3721 tttagattta tatttagatt tgtattgaaa tttaattttg cgttataaaa ttttatatca
     3781 agattatcta gataattgtt ttcttgtttg ttgatagagt tatcaaatga taaagtataa
     3841 gaatccgagc ttaatttatt gataaaagag ctgatttttg gatcttgttg aaataagctt
     3901 gcattgatgt cgctaacaac tttttctcca agtttaaaat tttcaaaaac caaatttgat
     3961 tgtatgcttt tttggttttt aaaaagatcg ttgtaatatt ctttaatgct aattgatgca
     4021 tttgcttcgc ctttgtaaat ttcatttgag cgaattttga tattttttgc ttgaaatagc
     4081 tcttgatact catctttatt atcttttgca agagttttga aatttgaact taaacacgct
     4141 ataaaatcac catctgcatt gcatttaaaa tctgagaatt caatctttat tccagagtcc
     4201 tgagaaaggc ttgcaatttc ttgtttaact gtttgattta gttgattttc atatttttta
     4261 actgtttttt catctatgga atttccgcaa gctgaaaaca aaacagctat tccaatagag
     4321 agaaaaatac cttttttcat agttttctcc ttaaaaattt taaaaaaaag attatatctt
     4381 tttttactta aaatttaaac aatgctaaaa gagggtgtga gattaattac atttttacac
     4441 ataggaaaat ctttttagtt tgtttcaaat gcattattta taattttaag tataattaac
     4501 tttgcaatta ttatatattt tgcaatagct ttaagcttat tttaaataaa ggaaatgtat
     4561 gaaaaaaata cttctaagtg ttttaacggc ctttgttgta gtagtattgg ctgcttgtgg
     4621 aggaaattct gactctaaaa ctttaaattc tcttgataag atcaagcaaa atggagttat
     4681 taggattggg gtatttggcg ataaaccacc ttttggttat gtggatgaaa aaggaaacaa
     4741 tcaaggctat gatatagctt tagctaaacg catagcaaaa gaactttttg gcgatgaaaa
     4801 taaggtgcaa tttgttcttg ttgaagctgc aaatagggtt gagtttttaa aatcaaataa
     4861 agtagatatt attttggcta attttactca aactccgcaa agagccgagc aggttgattt
     4921 ttgcttgcct tatatgaagg tagctttagg cgtagctgta ccaaaggata gtaatataac
     4981 tagcgtagaa gatttaaaag ataaaacctt gcttttaaac aaaggcacaa cagcagatgc
     5041 gtattttacg caaaattatc ctgatattaa aactttaaaa tacgatcaaa ataccgaaac
     5101 ttttgccgct ttgatggata aaagaggcga tgctttaagt catgataata ccttgctttt
     5161 tgcttgggtg aaagatcatc ctgattttaa aatggctatc aaagagttag gcaacaaaga
     5221 tgttatcgca ccagcagtta aaaaaggcga taaagaactt aaagaattta tcgataattt
     5281 gatcattaaa ctaggccaag agcagttttt tcacaaggct tatgatgaaa ctttaaaagc
     5341 tcattttgga gatgatgtta aggctgatga tgtagtgatt gaaggtggaa aaatttaaca
     5401 aagggctttt tgccctttat attgatttag gataaaatat gcaaaaaaaa tacaaaaata
     5461 ttatttatgc ttctttgggt ggaattttgg aattttatga ttttgtgctt tttgcctttt
     5521 ttttggatat ttttgctaag gtattctttc cgcaaaatga tgctttttgg atgcagataa
     5581 atgcttatat agcctttggt gctgcttatt tagcgcgtcc ttttggttct attgtgatgg
     5641 cacattttgc tgatagatat ggaagaaaga atatttttta tatttctatg cttttgatgg
     5701 ttttgcctag ttttgcttta gcttttttgc caagttatga aagtataggt atatttgcta
     5761 ctttgatttt atttactatt cgtattttgc aaggtttagc cgttggaact gaggtgagcg
     5821 gagcttggat ttatgtgagc gaatttgtca aagggcgtca aattccttta gctcttggtt
     5881 ttatttcagc gactttaacc ataggtttat tgctaggaaa tattgccact ttaggcataa
     5941 gatcttattt taccccagaa gaagttcaaa gctatgcttg gagaattcct tttatcatag
     6001 gaggattttt tggaatttta gctttgtttt taagaaataa actcagcgaa actccagaat
     6061 ttgtaaaagt tcaaaatgaa aagaaaattt taagttttcc attgtttgaa gctttaaaaa
     6121 ctcataaaat gagcatgctt gtttgttttt taatgaccat ggttttaaca agcggtgtgg
     6181 caactttgat gattttgcct aagtattttg aaagtctttt agctatgagt aaaacttctg
     6241 ctttatgggt acaaaatttt gctattttag cggtgatttt tggagcttta tttcaaggtt
     6301 ttttagcaag caaatgggga agctatagga tttgttctat ttttagtata gcttttatta
     6361 tctttggtat gctttttagt ttttatgatg agaaattttt attttatttt ttactggctt
     6421 gttttacaca aggtattatc actttcgcac ctgtttttat gacacaaatt tttaaaagcg
     6481 aacttaaatt tagtgggctt agttttgctt ataatatttc ttatgcgatt ttaggttttt
     6541 taaccccttt tgtagttaat gctttttata aagagtattt aggtatttat cttgctatag
     6601 tgggatcttg ctccttattt tgcgtgtttt tgttaaaacg cgtttttgca agaagcaaga
     6661 ttaaagaatt aagcattgtc ttttaaaact tcaaaaacaa ccttagatat tttttcaact
     6721 gaagcgattt cgcaatgctc atcagttgaa tgaggattat ggatatttgg acctatagaa
     6781 gcgcataaaa gctcttgttt tttctctata atgccacact caagccctgc atggatagct
     6841 gaaactttgg cattaggcga tattttttta agcgctttaa aaaccatgtc gctaagtgcg
     6901 tttggtttgc cttcccaagg tggatagaaa ttaaaacttc ttactttaaa atcaaaagcc
     6961 ttgaaaaatt ctaaagtttc aaattctact tgcttaagtc catcaagtat attagatctt
     7021 gcaaaaagtg cgaatttgat ttgtttatct tgcattctta aagtagctag gttaatgctt
     7081 gtttgaacta tacctagatt ttcatcataa gctctaactc catgagtaaa agaatttata
     7141 aggcttaaaa gtttgttact ttgatcgcaa atttcaaatt caccttcttc tttaaaatcg
     7201 cattttatcc agttattgct ctttacttca tttttaaaat gcactaaagc tttggcgtgt
     7261 ttaggtatag aattgattct ttctccacct tcaaaagaaa tgatttctcc tttattttct
     7321 tgtatgaatt tagccatttc tttgatggag cttttttcgt tgcgtacgat atttatgcct
     7381 gagtgtccac ctttaaaatt ttgcgcgtaa agctcataaa ttttaccctt ttttctaagg
     7441 gtattaaaag gcaagctagc ttctatatct actccacctg cacagcctat catgatctca
     7501 tcatcgcttt catgatctaa atttaaaagc attttagatt ctaaagtgtg ctcgagtgaa
     7561 ttcactccca tgagtcctac ttcttcatcg tttgtaaaaa gacactctaa atttttaaat
     7621 tcagccatag cactcatcat gatggctata cctataccat tatccgcgcc aagacttgaa
     7681 tttttggctc ttaaaaagcc attttcttca taaacttcta agtttggtgc atcgcccata
     7741 cagaccatat cataatggct ttgtaagcaa atttttggtt tgccttttat ggcacggata
     7801 tttcctgctt tatctacact cactttaaag cctttatctt tagcataaga gcttaaaaat
     7861 tctttcattt gttctgtttc ataactgcaa tgaggaattt tacataattg tttaaaattt
     7921 tctataacat tttgcatttt atctcctttg ttttgataaa attatggcat attt
//
LOCUS       DAPWGO010000065         7930 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.066, whole genome shotgun sequence.
ACCESSION   DAPWGO010000065 DAPWGO010000000
VERSION     DAPWGO010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7930
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.066"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            44..493
                     /locus_tag="RJ336_001324"
     CDS             44..493
                     /locus_tag="RJ336_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDZ5213766.1"
                     /translation="MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAY
                     EEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYL
                     LVEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQDTCKM"
     gene            558..1595
                     /locus_tag="RJ336_001325"
     CDS             558..1595
                     /locus_tag="RJ336_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ5213767.1"
                     /translation="MKVLNFFYENHPKFEVSYERKIQISKPNIIIKGPRFCGKKTLIF
                     NFLSQFKASEILFLDLYDTRFKKQSLERLADFLNENLQIKILCLYNLDFIPNLEKIKI
                     PIILSTNIKDLNINGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKN
                     ILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYV
                     IYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNF
                     YSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDSFFEQGVKFE
                     VISFDKFSLGF"
     gene            complement(1592..2323)
                     /locus_tag="RJ336_001326"
     CDS             complement(1592..2323)
                     /locus_tag="RJ336_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HDZ5213768.1"
                     /translation="MKPIIIFLSLFLIPLFADDLKSGFGEEYYKLDIDQKRQIFFIKM
                     NEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLITIKNKYRIENLYDFAE
                     YKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHK
                     IKIFDSLQDSVDSYVLNLNRHFAYEKFRDVRAKFESEGKEITGLEAIKTLDSYSERKG
                     YYINLITKIIKRYNLEKYDTNSNNT"
     gene            complement(2298..3047)
                     /locus_tag="RJ336_001327"
     CDS             complement(2298..3047)
                     /locus_tag="RJ336_001327"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDZ5213769.1"
                     /translation="MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFI
                     VILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHNNKINPNMSFLTGAGVIKAK
                     VNQNKVEVSLGKIKSVQNTFEELGKTWQLCDTGVPHLVHFCQNLDEFDTMLCQKMRQK
                     YNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPK
                     SGEEVGFTYKNEELFFEGKVKYCFEANYNFS"
     gene            complement(3044..3649)
                     /locus_tag="RJ336_001328"
     CDS             complement(3044..3649)
                     /locus_tag="RJ336_001328"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDZ5213770.1"
                     /translation="MKNTFFVTASIACGKSTFIEIANSLGFKSISADKIAHEILDENT
                     LELEKIFSPFSLKNLLTKEKKIDRKTLGEIVFNNKEAKKTLENFTHPKIRAKILEQMQ
                     ILDKENKSFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLD
                     SQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGKM"
     gene            3710..4699
                     /locus_tag="RJ336_001329"
     CDS             3710..4699
                     /locus_tag="RJ336_001329"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDZ5213771.1"
                     /translation="MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDNVVGGIGSFAGA
                     FRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFL
                     DYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMA
                     EEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDIL
                     LEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYT
                     IGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE"
     gene            complement(4720..6174)
                     /gene="dcuC"
                     /locus_tag="RJ336_001330"
     CDS             complement(4720..6174)
                     /gene="dcuC"
                     /locus_tag="RJ336_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
                     /protein_id="HDZ5213772.1"
                     /translation="MPIFMICSTLLAVIVVAYYILKKYNPIFVFFLSGIILLIFAFYI
                     TGTPIQKAPSREHASFLNVLLDSYAFITATFKSQLSGVGLIIMSVAGFAAYMKHINAS
                     AKLAFLANKPLGKIKNKYLILSGTFVVGMALKIVISSYAGLLLLLLACIYPVLISLKI
                     RPITAVCVLSLIALDYGPKDGNSINMADMVGQSDNVVGLFLNYQIYSVIAYVVVIAIL
                     IPFYFAWIDKRDKEKGVLNDEVEIPQIIDPKCPTFYILFPWLPVVFLFTAYFFTIKLD
                     VVTANFVSISLVFLVEFARHRNARKLGEDIMVILKAMAEIFISVVSIIIAAGVFAEGI
                     KALGGVNILANAVSNLGTGNFAWFGILLSIAILSFLVYFATVIMGSGIAAFNAFGKLA
                     PDIATKLGVAPITLVLPIEIASCLGRAASPIAGGIIALAGFAKVAPMDIIKRTTPLLL
                     IAMLVNVLVAFYLAQTNPLPKEQNTTKIELKIQK"
     gene            6381..>7930
                     /gene="cas9"
                     /locus_tag="RJ336_001331"
     CDS             6381..>7930
                     /gene="cas9"
                     /locus_tag="RJ336_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344900.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HDZ5213773.1"
                     /translation="MARILAFDIGISSIGWAFSENDELKDCGVRIFTKAENPKTGESL
                     ALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPY
                     ELRFRALNELLSKQDFARVILHIAKRRGYDNIKNSDNEEKSEILKAIKQNEEKLVNYQ
                     SVGEYLYKEYFQKFKENSKEFINVRNKKESYERCIAQSFLKDELKLIFQKQREFGLSF
                     SKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLN
                     NLKNTEGILYTKDDLNTLLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKK
                     YKEFIKALGDHSLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKD
                     HLNISFKALKLITPLMLEGKKYDEACNELNLKVVINEDKKDFLPAFNETYYKDEVTNP
                     VVLRAIKEYRKVLNALLKKYGKVHKINIELAREVGKNHSQRAKIEKEQNENYKAKKDA
                     ELECEKLG"
BASE COUNT         2853 a         1109 c         1252 g         2716 t
ORIGIN      
        1 attttatgtt ataattttaa aaatcaaaaa aaaggagtca atcatgtcag ttacaaaaca
       61 attattacaa atgcaagcag atgctcatca tctatgggtt aaatttcata attatcactg
      121 gaatgtaaaa ggtttgcaat ttttttctat acacgaatac acagaaaaag cttatgaaga
      181 aatggcagaa ctttttgata gttgtgctga aagagtttta caacttggtg aaaaagctat
      241 cacttgccaa aaagttttaa tggaaaatgc aaaaagtcca aaagttgcaa aagattgctt
      301 tactccgctt gaagtcatag aactgatcaa acaagactat gaatatcttt tggtggaatt
      361 taaaaaactc aatgaagcag cagaaaaaga aagtgatact acaacagctg cttttgcaca
      421 agaaaatatc gcaaaatatg aaaaaagtct ttggatgata ggtgctactt tacaagatac
      481 ttgcaaaatg taatttaagg ggctttatgc cccaattata taaattaggt tataatatcc
      541 ttttttaaag gataaaattg aaagtactta atttttttta tgaaaatcac cctaaatttg
      601 aagtaagtta tgaaagaaaa attcaaattt caaaaccaaa tattatcata aaaggcccac
      661 gattttgtgg taaaaaaaca cttattttta attttttatc acaatttaaa gcaagtgaaa
      721 ttttgttttt agatttatat gatacacgct ttaaaaaaca aagtttagaa agacttgctg
      781 attttttgaa tgaaaattta caaattaaaa ttctttgcct ttataatttg gattttatcc
      841 ctaatttaga aaaaattaaa attcccatca tcttaagtac aaatataaaa gatttaaata
      901 taaatgggtt tgaagagctt gaactcgatt attttgattt tgaagaattt attagtgtaa
      961 gtaagaaaaa tttacctata aataatttag taggtctttt tttgcaaagt ggacgcagta
     1021 aatttggaga aaaaaacata cttctaagac aaagcttcac tcttttagaa ttagaaattt
     1081 taaagtattt agctttaaat ttgggtcagc aaatcagtat ttctaagata tttatagaac
     1141 tcaaaaaaag attaaaaact tcaaaagata gtgtttatca agctataaaa aaattagaaa
     1201 atacttatgt gatctatact ttaaaacatg atgaaaaaaa acttcaaaag atttatttta
     1261 aagattttgg cctaagaaat aatctttgta tttcaaagga tttttcacat ttatttgaaa
     1321 atttagtttt aagcgagctg tttaaattta aagaagaatt tttttataac aaatacttta
     1381 acttttatag ccaaatatct aaaattgctt atatttcaag tccaacttta gatattgatt
     1441 tgattaaact acgtgctaag aaaattttac caaaggcttt agaacttgga atttttcatg
     1501 tgatttttat cactctttca agcgaggata gtttttttga acaaggggtt aaatttgaag
     1561 tcatatcttt tgataaattt tcacttggat tttaggtgtt gtttgagttt gtatcgtatt
     1621 tttcaaggtt gtatcgtttg atgatttttg taataagatt gatataatat cccttgcgtt
     1681 cagaataaga atctaaagtt ttaatagcct ctagccctgt tatctctttg ccttcgcttt
     1741 caaatttagc tcttacatcg cgaaactttt cataagcaaa atgacgattt aaatttaaaa
     1801 cataagagtc aacactatct tgcagactat caaaaatctt aattttatgt tttttatctg
     1861 gatgtcttaa atcaggaatt aaacctttct caccccaagt ccattctcca aaaagattgt
     1921 ttgcttctct tgcgaagcga ctggtacctg tagcactttc aactaaagct tgggctatac
     1981 ccatggattt tggaattttt tgaatacgtt ttttatattc tgcaaaatca taaagatttt
     2041 caatgcgata tttgtttttt atcgtgataa gtttttcaag atttatttgg tttgaagtcc
     2101 taaagcctgt tttgtaagca tctttaaaaa aggcttcgat aaaggctctt tcttgttcaa
     2161 tttttttaaa gctttgatca aacatttcat tcatttttat aaaaaaaatt tgtctttttt
     2221 gatctatatc aagtttgtaa tattcctctc caaatccact ctttagatca tcagcaaaaa
     2281 gtgggattag aaaaagacta agaaaaatta taattggctt caaaacaata ctttaccttt
     2341 ccctcaaaaa ataattcttc atttttatat gtaaacccca cctcttcacc acttttagga
     2401 gttattttaa ctttattttg tactttttta tttaaaaatg ccagataaaa acaagccccc
     2461 attcctgtgc cgcaagctaa ggtttcatct tcaactccgc gttcataggt gcgaactttt
     2521 aaatgatttt catctaaaat ttttacaaaa ttaacattgg cattatattt ttgtctcatt
     2581 ttttgacaaa gcattgtatc aaattcatct aaattttgac aaaaatgtac tagatgtgga
     2641 actccagtat cgcaaagttg ccaagttttt cctaattctt caaaagtatt ttgcacgctt
     2701 tttattttgc ctaaagatac ttcaacttta ttttgattta cctttgcttt tattactcct
     2761 gcgccagtta aaaaactcat gttaggattt attttgttat tatgatgtgc aaaatgtgcc
     2821 gcagcccttg agccattgcc acacatagca gcccttgagc catcgttatt ataaaattcc
     2881 cattcaaagt cgtatttttc atgaggcaat atcacgataa agccatccgc acctataccc
     2941 tcataacgat tacaaagttc tttagctaaa gcacttctat cttcttttct atcagcattt
     3001 gttatgacaa aatcattccc acttgcacaa tatttataaa atttcacatt tttcctttag
     3061 aaatttcttg tattacttta acacattctt gcctaaaatc ggcataagaa ttagtatttt
     3121 taatgataaa atctgctttt ttaagttttt cttcaatatc tatttgagaa tcaagtcttg
     3181 cttttgcagc ttctaagctg agcttatctc tttgcatgat tcttttaagg cttaattctt
     3241 taggtgtgta aattactatg actttgccta aattttcata agcaccgctt tcaaaaaaaa
     3301 gaggaatttc tacaaaaaaa gatttatttt ctttatctag aatttgcatt tgttctaaaa
     3361 ttttagctcg aattttagga tgagtgaaat tttctaaggt ttttttagct tctttgttgt
     3421 taaaaacaat ttctccaagg gtttttctat cgattttctt ttcttttgtg agtaaatttt
     3481 ttaagctaaa gggagaaaaa atcttttcaa gttctaaagt attttcatct aaaatttcat
     3541 gagcgatttt gtctgcgcta atgcttttaa agcctaaaga attcgctatt tctataaaag
     3601 tgcttttacc acaagcaatt gaagcggtta caaaaaaagt atttttcatc ttatgcctta
     3661 ttaaaacttt tttcgttaaa ataccttttt agttcttaaa ggaaaataaa tgaaaatttc
     3721 atatgaagat gcaggcgtaa gtatagataa tggaaatgcc tttgtagagg ctataaaacc
     3781 tttggttaaa gaaactttta atgataatgt tgtaggtgga attggttctt ttgctggtgc
     3841 ttttagaatg ccaagtggtt ttaaaaagcc tgtgatttta ggtgcaacag atggggttgg
     3901 taccaagctt cgcttggcaa ttgatgctaa aaaatatgat actatagggc aagatttagt
     3961 agcaatgtgt gtgaatgatt tgatttgtaa ttttgctacg cctttgtttt tcctagatta
     4021 ttatgctaca gccaagctcg aagtagaagt agcaaaggct gttgtatcag gcattgccaa
     4081 gggatgtaag atggcaaatt gtgcattaat tggcggagaa actgctgaaa tgcctggaat
     4141 gtatgcaaaa gatgattttg atcttgcggg ttttgcagtg ggtatggctg aagaagatga
     4201 gattgataga agtaaatttg ttaaaaatgg tgatatttta ttggcacttc ctagttcagg
     4261 acttcattca aatggttatt ctttagctag aaaagtactt tttgaaagtt taaaattaaa
     4321 atttgatgac aagatagagg gtaaaaattt aattgatatt ttgttagaac ctacaaggat
     4381 ttatgtgcgt gattttctta cgctaaagcc ttatatcagt gctctagctc atattacagg
     4441 gggtggttta gtagaaaatt taccacgcgt tttacctcgt ggtatgggtg caactatacg
     4501 caaacatcat cttaaaactc ctgaaatttt ttatactata ggacaggctg tagaagaaag
     4561 cgaaatgtat agaagcttta acatgggagt gggtttagta atggttgtag atccttctaa
     4621 tgtaagtaag gttttagaaa attcagatgc ctttattatc ggcgaaattt gcattaatga
     4681 aggtattgtt ttagagtgaa aataaagcgt caatacgctt tatttttgta ttttaagttc
     4741 tatttttgta gtgttttgtt cttttggcaa aggattggtt tgtgctagat aaaaggctac
     4801 gagtacattt acaagcatag cgataagtaa aagaggagtg gttcgtttta taatatccat
     4861 tggagctact tttgcaaatc cagctaaagc tatgattccg cctgctattg gtgaagctgc
     4921 acgacctaaa caagatgcaa tttctatagg taaaactaga gtaataggtg caacgcctaa
     4981 ttttgtagct atatcaggag ctagtttgcc aaaagcatta aaagcagcaa ttccacttcc
     5041 cataatcact gtggcaaaat aaactaaaaa gcttaaaata gctatactca aaagaattcc
     5101 aaaccatgca aaatttcctg ttccaagatt tgaaaccgcg ttagcaagga tattaactcc
     5161 accaagtgct ttaatgcctt cagcaaatac tccagcagcg atgattatgc ttacgactga
     5221 gataaaaatt tcagccatag cttttaaaat caccattata tcttcgccta attttctagc
     5281 atttctgtgt cttgcaaatt caacaagaaa aactaaagaa atgcttacaa aatttgctgt
     5341 tacaacatca agcttgatag taaaaaaata cgctgtaaat aaaaatacaa caggtaacca
     5401 aggaaagagt atgtaaaaag tagggcattt aggatcaatg atttgcggaa tttcaacttc
     5461 atcatttaaa acaccttttt ctttatctct tttatcaatc caagcaaaat aaaaaggaat
     5521 caagatggca ataactacaa cataggcaat cacactataa atttggtaat ttaaaaaaag
     5581 ccctacgaca ttatcacttt gtcctaccat atctgccata ttgattgaat ttccatcttt
     5641 tggaccataa tcaagcgcaa ttaaagaaag cacacataca gctgtaatag gacggatttt
     5701 aagtgagatt aaaacaggat aaatacatgc taacaaaagc aaaagcaatc cagcatagct
     5761 agaaatgacg atttttaaag ccattccaac aacaaaagtt ccacttaaaa tcaagtattt
     5821 atttttgatt tttcctaagg gtttatttgc taaaaaagca agttttgccg aagcattgat
     5881 atgtttcata taagcagcaa aacctgccac actcatgata ataagtccta ctccagaaag
     5941 ctgactttta aaagtcgctg tgataaaagc ataactatca agtaaaacat tcaaaaagct
     6001 tgcatgttct ctgctcgggg ctttttgtat aggtgttcct gtgatgtaaa aagcaaaaat
     6061 aagcaagata atacctgaaa gaaaaaatac aaaaatggga ttgtattttt tgagtatata
     6121 ataagcaaca acaattaccg ctaaaagtgt agaacatatc ataaaaattg gcatgatttc
     6181 tcctaaggtt attattagct tttattttat tttagctaaa atttaactaa taaatatttt
     6241 tcatttaaaa ttttacttat tttttgcatt ataaaattaa taatatgtat agtttggtta
     6301 ctgaaaggtt tatgtttgta taaaaaatga tttttatatt ataattataa acaaatcata
     6361 aatattaaaa aggatctagt gtggcaagaa ttttggcatt tgatatagga ataagctcta
     6421 ttggctgggc atttagcgaa aatgatgagt taaaagattg cggagttagg atttttacaa
     6481 aggctgaaaa tcctaaaaca ggagaatcct tagccttgcc aagacgcctt gcaagaagtg
     6541 ctagaaaacg ccttgctaga cgcaaagcaa ggctaaatca cttaaaacat ttaatcgcaa
     6601 atgaatttaa gttaaattac gaagattatc aaagctttga tgaaagttta gctaaggctt
     6661 ataaaggctc tttaattagc ccttatgagt taagatttag agctttaaac gagcttttaa
     6721 gtaagcaaga ttttgcaaga gtgattttac atattgcaaa aaggcgtggt tatgataata
     6781 taaaaaatag cgataatgaa gaaaagagtg aaattttaaa agctatcaag caaaatgaag
     6841 aaaaactagt aaattatcaa agtgtgggag agtatcttta taaagagtat tttcaaaaat
     6901 tcaaagaaaa ttccaaagaa tttataaatg ttagaaataa aaaagaaagt tatgaacgct
     6961 gcatagcgca aagtttttta aaagatgaat taaagcttat ttttcaaaaa caaagagaat
     7021 ttggcctttc tttttcaaag aaatttgaag aagaagtgct tagtgtagca ttttataaaa
     7081 gggctttaaa agatttttct catttggtgg gaaattgtag tttttttact gatgaaaaaa
     7141 gagcgccaaa aaattcgcct ttagctttta tgtttgtagc gcttacaaga attatcaatc
     7201 ttttaaacaa tcttaaaaat actgaaggaa ttttatatac aaaagatgat ttaaacacgc
     7261 ttttgaatga agttttaaaa aacggcactc taacttataa acaaacaaaa aagcttttgg
     7321 gcttaagcga tgattatgaa tttaaaggag aaaaaggaac ttattttatt gagtttaaaa
     7381 aatataaaga atttataaaa gccctaggtg atcatagttt aagccaagat gatttaaatg
     7441 aaatagcaaa agatattacc cttataaaag atgagattaa gcttaaaaag gctttagcaa
     7501 aatacgattt aaatcaaaat caaattgata gtttaagcaa attggaattt aaagaccatt
     7561 taaatataag ttttaaagcc ttaaaactta tcactccttt aatgcttgaa ggtaaaaaat
     7621 acgatgaagc ttgtaatgag cttaatttaa aagtagtaat caatgaagat aaaaaagatt
     7681 ttttacccgc atttaatgaa acttattata aagatgaggt aactaatcct gtagttttaa
     7741 gggcgattaa agaatacaga aaggtcttaa atgctttact taaaaaatac ggcaaagtgc
     7801 ataaaataaa cattgaatta gcaagagaag taggtaaaaa tcacagccaa agagctaaaa
     7861 tagaaaaaga gcaaaatgaa aactacaagg ccaaaaaaga cgccgagctt gagtgtgaaa
     7921 aactaggctt
//
LOCUS       DAPWGO010000066         7926 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.067, whole genome shotgun sequence.
ACCESSION   DAPWGO010000066 DAPWGO010000000
VERSION     DAPWGO010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7926
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.067"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            97..2459
                     /locus_tag="RJ336_001332"
                     /pseudo
     CDS             97..2459
                     /locus_tag="RJ336_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866870.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
     gene            2470..3126
                     /gene="dmsB"
                     /locus_tag="RJ336_001333"
     CDS             2470..3126
                     /gene="dmsB"
                     /locus_tag="RJ336_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
                     /protein_id="HDZ5213774.1"
                     /translation="MKLEENSQFGFMLDQSKCVGCRTCSLSCKDYKNMPVGVNFRRVF
                     ETEGGNWTCKEDGSFEQSVFAYYTSISCNHCSNPSCLKACPTGATMKIKWGIVAIDDS
                     MCIGCKACAMACPYGAPQFNHESGHMSKCDGCYERLKEGKNPICVDSCPFRALKAGDI
                     TKLREEHGNLASITPLPDASITHPNLCIVPEKHSLPSGNKSAIFHLPQNYQGVKNDII
                     "
     gene            3113..3979
                     /locus_tag="RJ336_001334"
     CDS             3113..3979
                     /locus_tag="RJ336_001334"
                     /inference="COORDINATES: protein motif:HMM:NF016838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HDZ5213775.1"
                     /translation="MTSFNHILSEMPLVLFTILAQAVIGLSLVYAPAFINGYKNYANL
                     KSFGLALGIAMMVAFIPSFFHLNDITHIFNVLNRMGVFYANNEWHIGWMNNEILFVSL
                     VCALGFLLYLKTSNWVFYLTLICGILGLFFMSGAYGSMQESVPTWDFKITLLYFFASA
                     IFLGAIVYYCFFENSEHERKMSFFTGLIGIGLLSTAIVLQTLHVGQTWIMGLVNPFEL
                     LGGTYDWFISLSFAFLGLGIVTWYLHNYLHEKFKSKFFAYFALLCAFLGVFTTRMLFY
                     GLISTQIMLGHS"
     gene            3979..4536
                     /locus_tag="RJ336_001335"
     CDS             3979..4536
                     /locus_tag="RJ336_001335"
                     /inference="COORDINATES: protein motif:HMM:NF014651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HDZ5213776.1"
                     /translation="MQKLAIDIFINFLQNPPNHFLLEKLKKEEFWQNWFLKNNSKLQC
                     TALKLLSSSNEDDKLIASDFTSLFLSDVDYVKAPPFASFYLDENKEIYSDNSDKVKQI
                     FAQNNFFSFFNEEPADSLINELLFISFLIKKQDDIILQKFLKEEFFTWFNMWSFDVIN
                     KAKTHFYKALTMLMQDFFNQLNTKF"
     gene            4603..5025
                     /gene="cgb"
                     /locus_tag="RJ336_001336"
     CDS             4603..5025
                     /gene="cgb"
                     /locus_tag="RJ336_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-domain globin Cgb"
                     /protein_id="HDZ5213777.1"
                     /translation="MTKEQIQIIKDCVPILQKNGVDLTNEFYKIMFNDYPEVKPMFNM
                     EKQISGEQPKALAMAILMAAKNIENLENMRNFVDKVAITHVNLGVKEEHYPIVGACLL
                     KAIKNLLNPDEATLKAWEVAYGKIAEFYIDIEKKLYDK"
     gene            complement(5045..6676)
                     /locus_tag="RJ336_001337"
     CDS             complement(5045..6676)
                     /locus_tag="RJ336_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter permease/ATP-binding
                     protein"
                     /protein_id="HDZ5213778.1"
                     /translation="MPFIMELLKQNKLKLISFLLFSFITSAVGVLTLVFINDYLLKNA
                     QNIPIFYFIVLLLIFFISSTIVELGLSIFGQNFIFKMQRRVVKQILDTPLLRVAKVGK
                     ARILASLGSDVRNISFGLLRLPDFLQSSILILCTSVYLCYLSPQIFALCVVWIMVIFI
                     TNNFLMMKVYQYFRKARENDDALQNNYQNILDGHKELLINRDRAKLYYEDEFENNARL
                     KKKNSTLGNLFNNLSNNWTNVTLLALVGVEFYLALKFEWASVADATTIALSILFLRTP
                     LVSMIGSFPTLLLAKIALDKIAKLELDDYIEGFKKTHYISEWKKISFRNTQFAYEENF
                     HLNPVNIELKKGELVFLIGKNGSGKSTFCMLLTGLFKPSKGGIYVDDTLIDDKNVDEY
                     RSLISAVFSDFHLFTKTLNKENFASEEKIAFWLEFLELKNKTSVKDNELTLTKLSTGQ
                     KKRLAMLIALLEERDILVLDEWAADQDPVFRRFFYKKLLPLLKEQGKTIFAITHDDAY
                     FDSADRIFLAQNGEISELKGENIKELAKNLVEKFD"
     gene            complement(6726..>7926)
                     /locus_tag="RJ336_001338"
     CDS             complement(6726..>7926)
                     /locus_tag="RJ336_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ5213779.1"
                     /translation="FFAEYIANVFFPKDMSEFWALLNTYGAFAAGYLARPLGGIVMAH
                     FGDKFGRKNMFMLSILLMVLPTFVLAFIPGYETLGFLAPVLLILIRIFQGIAIGGELP
                     GAWVFVREHCQEKQKAFFLSCLNSAMALGILLGSIVFLIINAFFSIEEIAAYAWRIAF
                     FVGGIFGIISIYLRRFLQETPVFKQMKKESSLSSFPLKDLFKEKDIVKNLFSSMMMTW
                     VLTGCVIVLVLLMPKFMPSILNLSGVEGSYLQILGILGIALGGAFMGYLVDKFGLFKI
                     CIFFSLTFVFFSFLYFYALYELKNLVLVCILYSIVCFLGGINVFAPILMSEVFRAKIR
                     FSGISFSYNIAYAISGGITPQLVFWLNTLASKNENPFLYGMSIYMIFLALLAICAVFI
                     VKDKIKF"
BASE COUNT         2959 a         1216 c         1224 g         2527 t
ORIGIN      
        1 tatttaggag ttttaaagtc ttaattttaa ttgaataaaa ttattatttg tattataatc
       61 gtaataattt ttgtcatata aatgtaagga gataacatgg aacaaaatcg tagagatttt
      121 ttaaaatgga gttctttgtt tggcagctta accttaagtc cgataaattt aagcgcaaat
      181 ttattaaaaa ctccaccatt aatcagcaaa tgggctggat gtaatgtaaa ttgtggaaca
      241 aaatgtcctg taaaagtgca tactcaagat ggaattatta aatatgtcag tactgataat
      301 gaaggtgatg atagctttga taatcgtcaa gcaagagcct gtattagagg tagaagctca
      361 agatataaag tttacaacgc aaatcgccta aaaagaccat taaaaagagt gggaaaaagg
      421 ggtgaaggta aatttatgcc tatttcttgg gaacaagctt ttgatgaaat ttctgccaaa
      481 atgcaagaaa ttaaagaaaa atacggcaat gaagcctttt atataaatta tgcaacagga
      541 acaacaggaa caataatcaa tcgctgtaca caaggtccat gggctagact tttaagtctt
      601 tatggtggtt attaaattat cataattctt attctacggc tcaaatttca aacgcaatga
      661 attttttcta tggtggatct cctgctagcg atatatacac tttacgctct gcaaaattag
      721 ctatattttt tggagcaaat catgttgaaa ctagaatggg aggtggtgga gtgggctatg
      781 cttatcaaaa agccttagaa gaaagtggat gtaaaataat tcacattgac ccaagatata
      841 atgattctat gatagggcat tgtgatgagt ggatacctat agcaccagga accgatgcag
      901 ctttgattgc tgcactaact tatgtgatga taaaagaaga tttacttgat agaacttttc
      961 ttgataaata caccataggc tttagcgaaa atactctgcc acaagatgca gccaaaaact
     1021 caagctatga aagctatgtt ttaggactaa acgatggagt agaaaaaact cctgattggg
     1081 ctagcaagat tacaaaaatt ccagcacgcc gcatagttca acttgcaaga gaaattgcca
     1141 ccataaagcc ttgttttata gaacaaggtt ggggagtgca aagacattca aatggagaac
     1201 aaaatgcaag ggcgatagca actctagctt gtattacagg aaatattggc atagaaggga
     1261 caaatacagg atgtcgaaca gggtcaagta aaacatatga tataatgggt atgcctttta
     1321 aaaatccaat aaaagattct attccttgtt ttttatttac agacgctatt tatcgcggaa
     1381 aagaaatgac agatattagt gatggggtgc gtggtacaac acaattaaaa caaaatatca
     1441 aatttatttt caatacagca ggaaattgtc ttacaaatca gcacagcacc attaaagaag
     1501 tgcatgatat tttaagcgat gagaatttat gtgagtgtat agtagatgtt aatgtaacta
     1561 gaactccttc aaataactac gcagattata tcttacctga tgcaactatg ctagagcaag
     1621 aagattttat aagacctagc gcaggatatt atagcaataa accttatatt atttattgtc
     1681 aaaaagctat cgagccagtt ggtgaagcaa aacctattta tgaaatgtgt cttgaacttg
     1741 ctaaaagact tggcatagaa aaagaattta gcgaaggaag aacacaaaaa gattggctaa
     1801 aataccttta tgaagaaagt atgaaaaaaa atccactttt gcctagtttt gaagaaatgt
     1861 gtgaaaaagg acttgtaaaa tttgagcctg taaaacctgt agtggcatta caaagtttta
     1921 taaaagatcc tatcaataat cctttaaaaa ctcctagcgg aaagatagaa atttatagca
     1981 caaaactcgc acaaatgcaa aaaacttgga aattaaaaga aggacaacaa atagtgccta
     2041 ttcctgtttt tgaaagccaa agagaaggga ttttggatcc attaaaacaa aagtatcctt
     2101 tgcaattttt tggctatcac tacaaaggta gaacgcattc tagcttttgg gaaattccac
     2161 aaattagaga agctaatccg caagaaattt ggataaatac catagatgca gagcaaagaa
     2221 gtatcaaaac gggcgatgtg gtgcaagcaa gaaatgactt aggaatcata caaggcatag
     2281 caaaagttac tccaaaaatc ataccaggtt gtgcagtaac cccacaaggt gcatgggcaa
     2341 aatatgaaaa tggtatcgat gttggaactt gtgtgaattc tttggcaagt atagtgccaa
     2401 ctgctatttc taaaggaaat ggacaacatt ctattttagt tgaaattgca aaagtttaag
     2461 gagaaaaaga tgaaattaga agaaaattca caatttggtt ttatgctaga tcaaagcaaa
     2521 tgcgtaggct gtaggacttg ctcactttct tgcaaggatt ataaaaacat gcctgtgggg
     2581 gttaattttc gccgtgtgtt tgagactgaa gggggaaatt ggacctgtaa agaagatgga
     2641 agttttgagc aaagtgtttt tgcttactac acctctattt cttgcaatca ttgttctaat
     2701 ccatcttgcc ttaaagcttg tccaaccggt gcaacaatga aaataaaatg gggaatagta
     2761 gcaatcgatg atagtatgtg tataggctgc aaagcttgtg ctatggcatg tccttatggc
     2821 gcacctcaat ttaaccatga aagtggtcat atgagcaaat gcgatgggtg ttatgagaga
     2881 ttaaaagaag gtaaaaatcc aatttgcgtg gactcttgtc cttttagagc attaaaagca
     2941 ggcgatataa caaaactgag agaagaacat ggaaatttag cctctatcac acctttacct
     3001 gatgcttcta tcacgcatcc aaatttatgt atagtgcctg aaaaacatag tttgccttca
     3061 ggtaataaaa gtgcgatttt tcatctacct caaaactacc aaggagttaa aaatgacatc
     3121 atttaatcac attttaagcg aaatgccttt ggtattattt actattttag cacaagctgt
     3181 aattggactt agtttggttt atgcacctgc atttataaat ggttacaaaa attatgcaaa
     3241 tttaaagtct tttggattag ccttaggaat tgcaatgatg gttgctttta tcccttcatt
     3301 ttttcattta aatgatatta cacacatttt taatgtatta aatagaatgg gtgtttttta
     3361 tgcaaacaat gagtggcata taggctggat gaataatgaa attttatttg tatctcttgt
     3421 atgtgctttg ggctttttgc tttatctaaa aacttcaaat tgggtgtttt atcttacgct
     3481 aatatgtgga attttaggac ttttctttat gagtggagct tatggctcca tgcaagaaag
     3541 cgtacctact tgggatttta agatcacttt gctttatttt tttgctagtg ctatattttt
     3601 aggtgctatt gtttattatt gtttttttga aaatagcgaa catgaaagaa aaatgtcatt
     3661 ttttacagga cttataggca tagggctttt aagcactgct atagttttac aaaccctaca
     3721 tgtaggacaa acttggatta tggggcttgt aaatcctttt gaacttttag gtggaaccta
     3781 tgattggttt atatcgcttt cttttgcatt cttaggactt gggattgtta cttggtattt
     3841 gcataattat ttacatgaaa aatttaaaag taaatttttt gcttattttg ccctactttg
     3901 tgcattttta ggggtgttta ccactagaat gctattttat ggacttataa gtactcaaat
     3961 catgttggga cattcttaat gcaaaaattg gcaatagata tatttatcaa ttttttgcaa
     4021 aatccaccta atcatttttt gctagaaaaa cttaaaaaag aagaattctg gcaaaattgg
     4081 tttttaaaaa ataatagcaa attacaatgc accgctttaa agcttttatc atcttcaaac
     4141 gaagatgata aattaatagc aagtgatttt acatctttgt ttttaagcga tgttgattat
     4201 gtaaaagcac cgccttttgc ttctttttat cttgatgaaa ataaagaaat ttattcagat
     4261 aattctgata aagttaagca aatttttgcg caaaataact ttttttcttt ttttaatgaa
     4321 gaacctgcag atagcttgat aaatgaatta ttatttatta gttttttaat caaaaaacaa
     4381 gatgatataa ttttgcaaaa attcttaaaa gaagaatttt ttacttggtt taacatgtgg
     4441 agttttgatg ttatcaataa agctaaaaca catttttata aagcattaac aatgttaatg
     4501 caagactttt tcaatcaact aaatacaaaa ttttaacaca agtcaatttt tttctccttt
     4561 ttaagatata taatatctct tttacattaa aaaggagaaa ttatgacaaa agaacaaata
     4621 caaatcatca aagattgtgt gcctattttg caaaaaaatg gagtagattt aaccaatgag
     4681 ttttataaaa taatgtttaa tgattatcct gaggtaaaac ctatgtttaa tatggaaaaa
     4741 caaatttcag gagaacaacc aaaagcttta gcgatggcga ttttaatggc agctaaaaat
     4801 atagaaaatt tagaaaatat gagaaacttt gttgataaag ttgctataac tcatgttaat
     4861 ttaggggtta aagaagagca ttatcctata gttggagctt gccttttaaa agccattaaa
     4921 aatcttttaa atcctgatga agccactctt aaagcttggg aagttgctta tggaaaaatt
     4981 gctgaatttt atatcgatat agaaaaaaag ctctatgata aataatataa gcccattttg
     5041 ggctttaatc aaatttttct actaaatttt tagctaattc ctttatattc tcacccttta
     5101 attcgctgat ttcaccattt tgagccaaga aaattctatc agcactatca aaatatgcat
     5161 catcatgtgt gatagcaaag attgttttac cttgctcttt tagcaaaggt aaaagttttt
     5221 tataaaaaaa tcttctaaaa acaggatctt gatcagccgc ccattcatca agcactaaaa
     5281 tatccctttc ttcaagcaag gctataagca tagctaaacg ctttttttgc cctgtagaaa
     5341 gtttggttaa ggtcagttca ttatctttga cacttgtttt atttttaagt tctaaaaact
     5401 ccaaccaaaa agcaattttt tcttcgcttg caaaattttc tttatttaag gttttagtaa
     5461 aaagatgaaa atcgctaaaa acagcagaaa taagagatct atactcatct acatttttat
     5521 catctataag cgtatcatca acataaattc cgcctttgct tggcttaaaa agtcctgtca
     5581 aaagcataca aaaagtggat ttaccacttc catttttacc tattaaaaat accaattcac
     5641 cttttttaag ttctatattt acaggattta aatgaaaatt ttcttcataa gcaaattgag
     5701 tatttctaaa agaaattttt ttccattcac tgatataatg tgttttttta aaaccttcta
     5761 tataatcatc taattccaat tttgcgatct tatccaaagc gatttttgcc aaaagcaaag
     5821 taggaaaaga tcctatcata gatactaaag gggttcgtaa aaacaaaata gaaagagcta
     5881 tagttgtagc atctgcaaca cttgcccatt caaattttaa agctaagtaa aactctacac
     5941 ccactaaagc caaaagagtt acatttgtcc agttgtttga gagattgtta aaaagattac
     6001 ctaaagtact atttttcttt ttcaatcttg cattattttc aaattcatct tcataataaa
     6061 gcttggctct atcacgattg atcaaaagtt ctttatgtcc atctagtata ttttggtaat
     6121 tattttgcaa agcatcatca ttttcccttg cctttctaaa atactgatat actttcatca
     6181 tcaaaaaatt attagtaata aaaataacca taatccatac cacacacaaa gcaaaaattt
     6241 gtggtgaaag ataacataaa taaacactag tgcataaaat caatatactt gattgtaaaa
     6301 aatcaggcaa tcttaaaagc ccaaaagata tatttctcac atcacttccc aaagaagcta
     6361 aaattctagc cttacctact ttagccactc ttaacaaagg ggtatctaat atctgcttta
     6421 ctacacgcct ttgcatttta aaaataaaat tttgtccaaa aatactaagt ccaagttcaa
     6481 ctatggtaga acttataaaa aatatcaaaa gcaaaacaat aaaataaaaa ataggaatgt
     6541 tttgtgcatt tttaagcaaa taatcattga taaaaacaag agttaaaact ccaacagcac
     6601 ttgtaataaa agaaaaaagc aaaaaagaaa tcaactttaa tttattttgt ttaagtaatt
     6661 ccataataaa aggcatttat aaactccaaa atataatttt aattataaca ttttaagagt
     6721 gattatcaaa attttatttt atcttttact ataaaaacag cacaaatagc caataacgct
     6781 aaaaaaatca tatatatact cataccatat aaaaatggat tttcattttt actcgcgagt
     6841 gtattaagcc aaaaaacgag ttgcggagta ataccgcctg aaattgcata agcaatatta
     6901 taagaaaaag aaattcctga aaatcttatt ttagctctaa aaacttcact cattaaaata
     6961 ggtgcaaaca cattaattcc acctaaaaaa caaacaatgg aatacaaaat acacaccaaa
     7021 accaaatttt taagctcata taaagcataa aaatataaaa aagaaaaaaa tacaaaagtt
     7081 aaagaaaaga aaatgcaaat tttaaataaa ccaaatttat ctacaagata acccataaaa
     7141 gccccgccta aagctattcc caaaattcct aatatctgta aataacttcc ttcaacccca
     7201 cttaaattta aaatactagg cataaattta ggcattaata aaacaagcac aataacacaa
     7261 cctgttaaaa cccaagtcat catcattgat gaaaataaat tttttacaat atccttttct
     7321 ttaaataaat ctttaagcgg aaaagaacta agcgatgatt cttttttcat ttgtttaaaa
     7381 acaggagttt cttgcaaaaa tctacgcaaa taaatagaaa taatcccaaa aattccacct
     7441 acaaaaaaag caatacgcca tgcataagca gcaatttctt ctatgctaaa aaaagcatta
     7501 atgattaaaa atactatact tcctaacaaa attcctaaag ccatagctga atttaaacag
     7561 cttaaaaaga aagctttttg tttttcttga caatgttctc ttacaaaaac ccaagctcca
     7621 ggcaattctc cacctatagc tatgccttga aaaattctta taagtatcaa taaaacagga
     7681 gctaaaaacc caagagtttc ataacctgga ataaaagcta agacaaaggt aggaagaacc
     7741 attagtaaaa tacttagcat aaacatattt ttacgcccaa atttatctcc aaaatgtgcc
     7801 ataactatac cacctaaagg acgtgctaaa tatccagctg caaatgctcc ataagtattt
     7861 aataaagccc aaaattcact catatcttta ggaaaaaata cattggctat atattcagca
     7921 aaaaat
//
LOCUS       DAPWGO010000067         7769 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.068, whole genome shotgun sequence.
ACCESSION   DAPWGO010000067 DAPWGO010000000
VERSION     DAPWGO010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7769)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7769)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7769
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.068"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            51..650
                     /locus_tag="RJ336_001339"
     CDS             51..650
                     /locus_tag="RJ336_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide A protein"
                     /protein_id="HDZ5213780.1"
                     /translation="MNNILLKLDKNRHFCFLKDNINYENKKDIAIFRGAVYQKYRKEF
                     FDSYFGRTFCDIGDTSKQPSQWKKNFLNKKEQMKYKFIISLEGNDVASNLKWAMNSNS
                     LVLAPKITCETWFMEGTLKPNYHFALIDNENLSAVIEYFKSRPKDALEIINNAHQYIK
                     KFLDKKKEFHIGILVLTKYFYYSRQLELNKKRDILELIK"
     gene            790..865
                     /locus_tag="RJ336_001340"
     tRNA            790..865
                     /locus_tag="RJ336_001340"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:823..825,aa:Ala,seq:ggc)
     gene            869..944
                     /locus_tag="RJ336_001341"
     tRNA            869..944
                     /locus_tag="RJ336_001341"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:902..904,aa:Val,seq:gac)
     gene            972..1502
                     /locus_tag="RJ336_001342"
     CDS             972..1502
                     /locus_tag="RJ336_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDZ5213781.1"
                     /translation="MQNTIIQKAVHKDLNSILEITKDALNAMKAMNFHQWDENYPNEI
                     VFKEDIQAQELYVFKENDEILGFICINEKFEPEFYKQVIFNKNYDEKAFYLHRLAVKQ
                     NAKGKGVAQKLLNFCENFALENHKASLRADTHSKNFPMNSLFKKLDFNFCGNFDIPNY
                     QDPFLAYEKILNQKAF"
     gene            complement(1482..2084)
                     /gene="leuD"
                     /locus_tag="RJ336_001343"
     CDS             complement(1482..2084)
                     /gene="leuD"
                     /locus_tag="RJ336_001343"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDZ5213782.1"
                     /translation="MQKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFH
                     DLRYLDDKESVLNMDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIA
                     PSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFS
                     FDLDDFHRICLLEGLDNIALTLKHEAQIKAYEKNSKSFLV"
     gene            complement(2086..3498)
                     /gene="leuC"
                     /locus_tag="RJ336_001344"
     CDS             complement(2086..3498)
                     /gene="leuC"
                     /locus_tag="RJ336_001344"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDZ5213783.1"
                     /translation="MTMAKTLYEKVFDAHVVYEGKNELPILYIDRHLIHEVTSPQAFS
                     GLKMAKRRMARADLTLATIDHDVSTKSIDLNACSDMAKEQITTLMQNTKEFGVRLLGL
                     GDKNQGIVHIVGPELGFTLPGVTLVCGDSHTATHGAFGALAFGIGTSEVEHVMATQTL
                     KQAKLKTMKIECKGQFQKGVYAKDLILYLIAQYGTAKGTGYAIEFCGELIRKLSMEAR
                     MTLCNMAIEFGAKVGMIAPDEITFEYIKGKEFAPKGEEFQKYCEYWKSLRSDEGAKYD
                     ESITLDVSKIKPQISYGTNPSQVIGIDEKIPKISDFKNQSEQKSLLDALSYVNLEQDQ
                     VIEGVKIDIVFIGSCTNGRLEDLKIAADILKGHKIHKNVKALIVPGSMQVRKEAENLG
                     LDKIFIEAGCEWRYAGCSMCLGMNDDKANSGQRVASTSNRNFVGRQGKGSITHLMSPA
                     SAAACAIEGVICDNRKYLGV"
     gene            complement(3485..4561)
                     /gene="leuB"
                     /locus_tag="RJ336_001345"
     CDS             complement(3485..4561)
                     /gene="leuB"
                     /locus_tag="RJ336_001345"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDZ5213784.1"
                     /translation="MKTYKVAVLAGDGIGPLVMKEALKILTFIAQKYNFSFEFNEAKI
                     GGASIDAHGVALSDETLKLCEQSDAILFGSVGGPKWDNLPIDQRPERASLLPLRKHFN
                     LFANLRPCKIYESLTHTSPLKNEIIQKGVDILCVRELTGGIYFGKQDLGKESAYDTEI
                     YTKKEIERIAHIAFESARIRKKKVHLIDKANVLASSILWREVVANVAKDYQDINLEYM
                     YVDNAAMQIVKNPSIFDVMLCSNLFGDILSDELAAINGSLGLLSSASLNDKGFGLYEP
                     AGGSAPDIAHLNIANPIAQILSAALMLKYSFKEEQAAQDIENAISLALAQGKMTKDLN
                     AKSYLNTDEMGDCILEILKENDNG"
     gene            complement(4558..6093)
                     /gene="leuA"
                     /locus_tag="RJ336_001346"
     CDS             complement(4558..6093)
                     /gene="leuA"
                     /locus_tag="RJ336_001346"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDZ5213785.1"
                     /translation="MKDNKIIIFDTTLRDGEQALGSSLGINQKLQIALALENLGVDVI
                     EAGFPVSSQGDFKAVQKIASKVKNSTICALSRVLDKDIDMAYEALKVAKHFRIHTFIA
                     TSTLHMQDKLKKDFDEILSMAKRAIIRARSYTDDVEFSCEDAGRTPIDNLCFMVENAI
                     KAGAKTINIPDTVGYTLPSEFANIIKILFNKVPNIDKAIISVHCHNDLGMATGNSLSA
                     ILQGARQIECTINGLGERAGNCALEEVVMAIKTRKDYLKGFYTDIKCENIFKTSKLVS
                     AITNESIPSHKAIVGSNAFSHSSGIHQDGVLKNRQTYEIISPSAIGIHENRMLMTARS
                     GRAMIKTCLENLGYDENTYNLDDVYERFLRLADKKGQVYDYDLEALMFLSYENEEENK
                     FILEKLSVISGNIPTACVCMRIKEELKTEACTGNGPVEAVFNCIARIMNLKPALKAYS
                     INAKSSGVDAQGQVDVDLEFKGRKFHGKGISTDVIEASAQAFVSAYNAIYRSLKVEER
                     KMA"
     gene            6413..7042
                     /locus_tag="RJ336_001347"
     CDS             6413..7042
                     /locus_tag="RJ336_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213786.1"
                     /translation="MLKELLEIKKEMEPVIHEANVKLNVLAREVIVRKKEYEIYGPMV
                     DRVYLDNAIYVKVMSSGRDVKTDNVTIKNGFYMVFVAPEKESTKDIKNKLKVAYEGLD
                     NKFIATLIRSCQRFKEIINKTQATLAKASKMNVVVKTNLGEASAALKFNITIEYTKEN
                     QKLTRENSKSAGSFRDTKTYINLVVEKNTDSQICEKLLDDVEKYFIGGG"
     gene            complement(7078..7722)
                     /locus_tag="RJ336_001348"
     CDS             complement(7078..7722)
                     /locus_tag="RJ336_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002890434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HDZ5213787.1"
                     /translation="MNKKLLSIIASATLFSNLALADENSGFFIGADAAWMHAQVKSEL
                     KHKNTKQNFNGDISGNIPSFGLKLGYRLNENHRIYAGYNYSDEFSDFIKTPKIQIEGD
                     FTTHKFLTGYDFTPKLFEKTRAVLGVYGGYARTDLTLKTSFLSLSQNFDGYFYGAKIG
                     ALYDLTPHNEIELGFKAEQIHYNSRNFYQNKVGSNFYDPKQTNYGVYLGYNYKF"
BASE COUNT         2663 a         1429 c         1030 g         2647 t
ORIGIN      
        1 atacttttaa agaagcaact atttgcaaat cgagatcttt ggaaaataat ataaataata
       61 ttttattaaa acttgataaa aataggcact tttgcttttt aaaagataac ataaactatg
      121 aaaataaaaa ggatatagcg atatttagag gagcagtata tcaaaaatat cgaaaagaat
      181 tttttgattc ttattttggt agaacttttt gcgatatagg agatacttca aaacaaccta
      241 gccaatggaa aaaaaacttt ttaaacaaaa aagaacaaat gaaatataaa tttataattt
      301 ctttagaggg taacgatgta gcaagcaact taaaatgggc tatgaattct aattctttag
      361 ttttagctcc aaaaataact tgcgaaactt ggtttatgga aggaacttta aaaccaaatt
      421 atcactttgc tttgattgat aatgagaatt tgtcagcagt aattgaatat tttaaaagtc
      481 gcccaaaaga tgcattggaa attattaata atgctcatca atatattaag aaatttttag
      541 ataagaaaaa agaattccat ataggaattt tggttttgac caaatatttt tattattcta
      601 gacaacttga acttaacaaa aaaagagata ttttagaatt aatcaaatag taaaattact
      661 ctcattaatt ctctaatttt tcataaaaaa taaatctttt tatacatata ttacatcata
      721 aattaaaaat ttgattttag ttttcagcca aaaacaagta atattgcgat aaaatctcag
      781 acttataaag gggcattagc tcagctggga gagcacaacg ctggcagcgt tggggtcagc
      841 ggttcgaacc cgctatgctc caccatatgg ttccgtagct cagctggtag agcactacct
      901 tgacatggta gtggccgttg gttcaagtcc aatcggagcc accatcaccc ttccttatac
      961 aaaggattat catgcaaaac actatcatac aaaaagccgt ccataaagat ttaaattcta
     1021 tacttgaaat cacaaaagat gctttaaatg ctatgaaagc tatgaatttt catcaatggg
     1081 atgagaatta tcccaatgaa atagttttta aagaagatat acaagcacaa gaactttatg
     1141 tgtttaaaga aaatgatgaa attttaggct ttatctgtat caatgaaaaa tttgaacctg
     1201 aattttacaa acaagttatt tttaacaaaa attatgatga gaaagccttt tatctacacc
     1261 gtttagccgt caaacaaaat gcaaaaggca aaggcgtagc acaaaaactt ttaaattttt
     1321 gcgaaaattt tgccttggaa aatcacaagg caagtttaag agcagatact catagtaaaa
     1381 attttcctat gaattcgctt tttaaaaagc ttgattttaa tttttgtgga aactttgaca
     1441 tacctaatta ccaagatcct tttttagctt atgaaaaaat tctaaaccaa aaagcttttt
     1501 gagttttttt cataggcttt gatttgtgct tcatgtttta aagttaaagc tatattatca
     1561 agcccttcca aaagacaaat tctgtgaaaa tcatctaaat caaaagaaaa aatcttatct
     1621 ttaaaaaata ctcttttttc caacaaagaa atttctatat ttttatcttg ggattttttt
     1681 aactcatcaa ctatttccaa aacctcatct ttagcaagtt ctatagtgag caaaccgttt
     1741 cctaaggcat tgtttttaaa aatatccgca aaagaaggtg cgataatagc tctaatacca
     1801 taatcaacca aagcccaagg cgcatgctct cttgaagagc cactaccaaa attttcaaaa
     1861 ctcaccaaaa tagagctatt ttgatattct tttttattga gattaaaatc catatttaaa
     1921 acactttctt tatcatctaa ataacgcaaa tcatggaaca aatgcttgcc aaaaccttgc
     1981 ttagacactg caagtaaaaa ttgcttaggt ataatttgat ctgtgtctat attggcatat
     2041 tctaaaggac aagctatacc tttgtgtata ataaattttt gcatattaaa ctcctaaata
     2101 ctttctatta tcacaaataa caccttctat ggcacaagct gctgcacttg caggactcat
     2161 caaatgagtg atagaacctt tgccttgtct gcctacaaag ttacgatttg aagttgaagc
     2221 aactctttga cctgaatttg ctttgtcatc attcatacca agacacatag aacaccctgc
     2281 atatctccac tcacaccctg cctcgataaa aatcttatcg agtcctaaat tttcagcttc
     2341 ttttcttact tgcattgaac caggcacgat taaagcttta acatttttat gaattttgtg
     2401 cccttttaag atatcagcgg ctattttaag atcttctaaa cgcccatttg tgcaagatcc
     2461 tataaataca atgtcgattt ttaccccttc tataacttga tcttgctcta aatttacata
     2521 agataaagca tcaagcaaag atttttgctc actttgattt ttaaaatcac ttatttttgg
     2581 aattttttca tctatgccaa tcacttgcga aggatttgtt ccatagctaa tttgtggttt
     2641 tatcttgctt acatctagag taatactctc atcatatttt gctccttcat cgcttcttaa
     2701 actcttccaa tactcacaat acttttgaaa ttcttctcct ttaggtgcaa attcctttcc
     2761 cttaatatac tcaaaagtga tctcatcagg agctatcata cctactttcg ctccaaattc
     2821 tatagccata ttacaaagag tcattctagc ttccatactt agttttctta taagttctcc
     2881 gcaaaattct atagcataac ctgtgccttt tgccgtgccg tattgtgcga tcaaatataa
     2941 aatcaaatcc ttagcataaa cgcctttttg aaactgccct ttacattcga ttttcatagt
     3001 tttaagtttg gcttgtttta aagtttgcgt tgccatgaca tgctctactt cactcgtgcc
     3061 tataccaaag gctaaagctc caaaagctcc atgtgttgcc gtatgagaat ccccacaaac
     3121 taaagtaacc ccaggtaaag taaagccaag ctcaggacct actatatgaa ctatgccttg
     3181 atttttatct ccaagtccta aaagccttac tccaaattcc ttagtatttt gcatcaaagt
     3241 tgtaatttgc tcttttgcca tatcagaaca agcatttaaa tctatacttt tagttgaaac
     3301 atcatgatct atagtagcca aagttaaatc cgctcttgcc attctacgct tagccatttt
     3361 aagccctgaa aatgcttgag ggcttgttac ttcatggatt aaatgtctat cgatataaag
     3421 tataggaagt tcgtttttgc cttcataaac cacatgagca tcaaagactt tttcatataa
     3481 agttttagcc attgtcattc tcctttaaaa tttctaaaat acaatccccc atttcatcgg
     3541 tatttaaata cgacttagca tttaaatcct tagtcatttt tccttgtgcc aatgccaaag
     3601 atatagcatt ttctatatcc tgtgcggctt gttcttcttt gaaactatac tttaacatca
     3661 aagccgcact taaaatttga gctatgggat tggctatatt taaatgagct atatcaggcg
     3721 cacttccacc tgctggctca taaagtccaa aacctttatc attcaaactt gctgaactta
     3781 acaaacccaa agatccatta atggcagcta actcatcact caaaatatca ccaaaaagat
     3841 ttgaacaaag cataacatca aaaatgctag gattttttac aatctgcatc gcagcattat
     3901 ccacatacat gtactctaag tttatatctt gataatcttt tgcaacattt gccaccactt
     3961 ctcgccacaa aatagaactt gctaaaacat tcgccttgtc gattaaatgc acttttttct
     4021 ttcttattct tgcactttca aaagcgatat gagctatcct ttctatctct tttttagtgt
     4081 aaatttcagt atcatacgca ctttctttac ctaaatcttg cttaccaaaa taaatcccac
     4141 ctgtaagctc tctaacacat aaaatatcca ctcctttttg gataatctca ttttttaaag
     4201 gtgaagtatg agttaaactt tcataaattt tacaaggacg caaatttgca aacaaattaa
     4261 aatgctttct taaaggcaaa agcgaggctc tttcaggtct ttgatctatg ggcaaattat
     4321 cccacttagg ccctccaaca gagccaaata aaatcgcatc actttgctca caaagcttta
     4381 aagtttcatc acttaaagcc actccatgag catctatact tgcaccgcct attttagctt
     4441 cattaaattc aaaactaaaa ttgtattttt gcgcgataaa agttaaaatt tttaaagcct
     4501 ctttcattac caaaggccct ataccatctc ctgctaagac agctacttta taagttttca
     4561 tgccattttc ctttcttcta cttttaaaga gcgataaatc gcattgtaag cactcacaaa
     4621 agcttgtgct gaagcttcta taacatctgt tgaaattcct tttccatgga attttctccc
     4681 tttaaattcc aaatccacat ccacttgtcc ttgagcatct acccctgaac tttttgcatt
     4741 gatactataa gcttttagcg caggctttaa attcattatc ctagcaatgc agttaaaaac
     4801 tgcttcaaca ggaccatttc ctgtgcaagc ttcagttttt aactcttctt taatacgcat
     4861 acaaacacaa gcagttggga tattgccact aatcacgctt aatttttcaa gtataaattt
     4921 attttcttct tcattttcat agcttaaaaa catcaaagct tccaaatcat aatcatacac
     4981 ttgacccttt ttatccgcaa ggcgtaaaaa acgctcataa acatcatcta aattataagt
     5041 attttcatca tagcctaaat tttcaaggca agtttttatc atagcccttc cacttcttgc
     5101 cgtcattaac atacgatttt catgaattcc tatggcacta gggcttatga tctcgtaagt
     5161 ttgcctattt ttaagcactc catcttgatg aatgcctgaa ctatgagaaa acgcattgct
     5221 acccactata gctttatgcg aaggtatact ttcattagtg atagctgaaa ctaattttga
     5281 agttttaaag atattttcac atttaatatc agtataaaaa ccttttaaat aatctttcct
     5341 agtttttatc gccataacca cttcttctaa agcacaatta cccgcccttt cgccaagtcc
     5401 atttatagtg cactctatct gtcttgcacc ttgtaaaata gcacttaaac tattgcccgt
     5461 tgccatacct aagtcattgt gacaatgcac agaaatgata gctttgtcta tatttggcac
     5521 tttgttaaat aaaattttga tgatattagc aaattcactt ggcaaggtat agcctacggt
     5581 atctgggata tttatagttt tagcgcctgc ttttatcgca ttttccacca taaaacaaag
     5641 attatctatc ggagttcttc ctgcatcttc gcatgagaat tctacatcat cagtataaga
     5701 tcttgctctt ataatcgctc tttttgccat agacaaaatt tcatcaaaat ctttttttaa
     5761 tttatcttgc atatgcaaag tcgaagtggc tataaaagta tgaattctaa aatgctttgc
     5821 cacttttaaa gcttcataag ccatatctat atctttatcc aatactctag aaagtgcgca
     5881 aatagttgag tttttcacct tagaagcgat cttttgcacc gctttaaaat ccccttgtga
     5941 agataccgga aaacctgctt ctataacatc tacgcctaaa ttttcaagcg ctaatgcaat
     6001 ttgtaatttt tgattgatac ctaaagaact acctaaagct tgttctccat cacgtaaagt
     6061 ggtatcaaag attatgattt tattatcttt catgatttaa tcctttaaaa ccaaacagac
     6121 tgaatgaatt aaaaattcaa aaacttaaca acaatgataa aaaattaaaa atgtaaaaaa
     6181 tgattaaaaa taaaattgag ttttagagtg agagttgcag tagcagatta aaagtattgt
     6241 ctttactttt ttgttggact gaatttaaaa tttcaaaaat ttgtttcatc ttttcctcct
     6301 ttgttaaaat taatacttaa tgtatcatat ttttagtaaa tgtgtttgta aaattcttaa
     6361 attaagaaaa ttattgatat aattgtaatt ttaagtaaca aaaaggaagt tgatgttaaa
     6421 agaactctta gagattaaaa aagaaatgga acctgttatc cacgaagcca atgtgaaatt
     6481 aaatgtccta gctcgtgaag tcatagtccg aaaaaaagaa tacgaaattt atgggcctat
     6541 ggtagatcgt gtttatcttg ataatgccat ttatgttaaa gttatgtcaa gtggacgcga
     6601 tgtaaaaaca gacaatgtga ctataaaaaa tggtttttat atggtttttg ttgcccctga
     6661 aaaagaaagt acaaaagata tcaaaaataa actcaaagta gcttatgaag gacttgataa
     6721 caaatttatc gctacactta tacgatcttg ccaacgcttt aaagagatca taaacaaaac
     6781 ccaagctaca cttgctaaag cttctaaaat gaatgtagta gtaaaaacaa atttaggcga
     6841 agcaagtgct gctctaaaat ttaacatcac tatagaatat actaaagaga atcaaaaact
     6901 cactcgtgaa aattcaaaat cagcaggaag tttcagagat actaaaactt atatcaatct
     6961 tgtagtagaa aaaaatacag attctcaaat ttgtgaaaaa ctacttgatg atgttgaaaa
     7021 atactttatc ggtggaggtt gatttcatta atgcaagtta taaaaacttg cattagatta
     7081 aaatttataa ttatatccta aatatacacc ataatttgtt tgtttaggat cgtaaaagtt
     7141 tgaacccact ttattttgat aaaaatttct agaattataa tgaatttgct ctgctttaaa
     7201 gcctaattct atttcattat gtggtgtcaa atcatataaa gcacctattt tcgctccata
     7261 aaaataaccg tcaaaatttt gcgacaaaga taaaaagctt gtttttaagg taagatctgt
     7321 tcttgcatat cctccataca cacctaaaac agctctggtt ttttcaaaaa gcttaggagt
     7381 aaaatcataa cctgttaaaa atttatgtgt agtaaaatca ccttcgattt gaattttagg
     7441 agttttgata aaatcactaa attcatcaga ataattataa ccagcataaa ttctatgatt
     7501 ttcatttaaa cgatatccaa gttttagacc aaacgatggt atattacctg aaatatctcc
     7561 attaaaattt tgctttgtat tcttatgttt taactcactt tttacttgag catgcatcca
     7621 agctgcatca gcacctataa aaaaaccaga attctcatct gctaaagcca aatttgaaaa
     7681 caaagtagca cttgcgataa tgcttaataa ttttttattc ataacctaac tccttataat
     7741 aaaattcgat ctaaaaaatt tagatcttt
//
LOCUS       DAPWGO010000068         7694 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.069, whole genome shotgun sequence.
ACCESSION   DAPWGO010000068 DAPWGO010000000
VERSION     DAPWGO010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7694
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.069"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            5..577
                     /locus_tag="RJ336_001349"
     CDS             5..577
                     /locus_tag="RJ336_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213788.1"
                     /translation="MKKILVSVLSSCLLASALSAVSFKEDGLKVSFEGYKTKDMIGTK
                     GEFKNVEYKFSKNTKDLASYLKGAKATIKPSNAFMGEGNDIITNNITKVFFPALLGDT
                     DIKVVFQDVIAGENKGVISAKITMDKKSTIVPLTYTIKDNKFEAKGQLDLHTFKNGSK
                     ALKALSDVAAGHGGISWPLVDISFNADLAE"
     gene            complement(593..1159)
                     /gene="rsmG"
                     /locus_tag="RJ336_001350"
     CDS             complement(593..1159)
                     /gene="rsmG"
                     /locus_tag="RJ336_001350"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDZ5213789.1"
                     /translation="MIFKDYDFLQNYDLKNFEEKVKIYKELLSKFNRIHNLTHLKNID
                     ENIFDSIKILDFYDFSKAKNIADIGSGAGFPAVFLAFLLQNNFHLFEPNPKKAAFLRT
                     LKIECELSNLHIYKEKVQEYQNIFKADIITSRALMDVKPLLEICKNLKDENTVFILWK
                     GSEIYQELENIKDYEIFENNLRKYCILK"
     gene            complement(1160..1720)
                     /gene="ribA"
                     /locus_tag="RJ336_001351"
     CDS             complement(1160..1720)
                     /gene="ribA"
                     /locus_tag="RJ336_001351"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HDZ5213790.1"
                     /translation="MKIKISEIANLPSKWGNFQIQSFKENDKEHLCIFKNTPKDTLNL
                     RIHSECLTGDALGSLKCDCGEQLEFSLKYIEKNGGMVIYLRQEGRGIGLFNKVNAYAL
                     QDKGFDTIKANHQLGFKADERTYEIVEFILKHYEISKVNLLTNNPEKLESIKEKIITR
                     IPILIEPNRFNVEYLNIKQTQMGHLK"
     gene            1777..2760
                     /gene="hemB"
                     /locus_tag="RJ336_001352"
     CDS             1777..2760
                     /gene="hemB"
                     /locus_tag="RJ336_001352"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDZ5213791.1"
                     /translation="MFKRFRRLRLNENLRAMVRENSLSVNDLIYPLFVVNETGIKKEI
                     SSMPDVFQMSLDEILKECQNVVNLGIKAIILFGVLENEKKDSCGSDALDDKGLVARSI
                     REIKKNFPDLFIISDLCFCEYTDHGHCGIIDPKTKSVDNDATLEISAKQALVHARAGV
                     DMIAPSGMMDGIITTLRKALDKEGFENLPIMAYSTKFASSYYGPFRDVAESAPSYGDR
                     KSYQMDFANGKEALEESLEDEAQGADILMVKPALAYLDVVKEISLHSNLPLCVYNVSG
                     EYAMLKAAKNAGVIDYEKVLYETMIAFKRAGAKLIITYHAKELAKMLKGEK"
     gene            2757..3677
                     /gene="argF"
                     /locus_tag="RJ336_001353"
     CDS             2757..3677
                     /gene="argF"
                     /locus_tag="RJ336_001353"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDZ5213792.1"
                     /translation="MKHFLTLRDFSKEEILSLVNHASELKKEPKKLLQDKTLAMIFEK
                     NSTRTRMAFELAITELGGKALFLSSNDLQLSRGEPVKDTARVIGTMVDFVMMRVNKHE
                     TLLEFARYSKAPVINALSEFYHPTQVLGDLLTIKEWNKMQNGIAKVAFIGDSNNMCNS
                     WLIVAAILGFEFSIAIPKNYKISPEIWEFAMKQALISGAKISLSHDKFEALKDKDVVI
                     TDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEEIFEK
                     HADVIFEEARNRLYVVKALLCFLDNQRGRE"
     gene            3674..4165
                     /locus_tag="RJ336_001354"
     CDS             3674..4165
                     /locus_tag="RJ336_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2603 domain-containing protein"
                     /protein_id="HDZ5213793.1"
                     /translation="MKELEKYSTCLKRIDEFSQNLGIKKKDRTIFKMKQSENENEKCL
                     VLENGSFDSPEPWFVIDENDEIHTLLSLQSLKNILESLKQSQKENFELRLEKAIYQQI
                     PVDFNDVWTVAMDEIKQKAQNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNQN
                     ERL"
     gene            4152..5507
                     /gene="hemN"
                     /locus_tag="RJ336_001355"
     CDS             4152..5507
                     /gene="hemN"
                     /locus_tag="RJ336_001355"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDZ5213794.1"
                     /translation="MRDYKAFVKYSKAGPRYTSYPTAVEFNTNFKYEEYIEILKKQDR
                     SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILNTILDTKREVVQM
                     HFGGGTPTFFSAKQLQNLILKIRSVFGNFSKDAEISCEIDPRFLNEEQATVLTQNGFN
                     RISFGVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFT
                     QTLEKVMLLNPDRLAIFNYAHVPWLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNG
                     YKMIGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIGEGQRHYAQN
                     FKDMSSYEAALDRGVLPFERGVALSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQ
                     EYFKEDLKALEEYKDFINFDENFIKVNETGVLLIRNIAMCFDAYMKNISEDKKVFSKT
                     V"
     gene            5509..6774
                     /locus_tag="RJ336_001356"
     CDS             5509..6774
                     /locus_tag="RJ336_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDZ5213795.1"
                     /translation="MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYK
                     EGSLELDKEAKKVFESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKKFGIAWYKKLIF
                     FFLRRRKILDLVAKLGYVFQSCAFKIQNENENTGMKARFSMPFVKKGRLLTSFNKKSF
                     LNSNPKFINNDGEKTIGFFVGCLANYFYIDTANAVLKIAKELKINVDLMKEQVCCGAP
                     QFFTGDFKSVEVLAKKNIEYFEKKIEKLDAIIVPEATCSAMLKIDYEHFFIMQNDLDW
                     AKRAKCVSSKIYMASEYFYKFTSLEEILKTKNKFNYSITYHDPCHARKMQGVFKEPRE
                     LLKTNYHFVEMSNSNTCCGFGGVSMQTDYYDRALSVGLKKAQMIDESKASVVSAECSA
                     CRMQISNALEQNSSKVVFVSPLELIAKAL"
     gene            6771..7532
                     /locus_tag="RJ336_001357"
     CDS             6771..7532
                     /locus_tag="RJ336_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5416 domain-containing protein"
                     /protein_id="HDZ5213796.1"
                     /translation="MMMKIVFKGKSSEYEIQRSCFCVDAFVIKDKIEERDGVDFITSN
                     VDLLEFSDDSFTFEEIVKHFNICDTEDMIIVEDFDMKSNKDNQNQEDDIEHNILKSEK
                     IIHENTKQTSMQFKNLKFFSRIFKNENFLSDFKESKQEVVTIKKHEKLEIFKNLSQED
                     QEISFVKIEILNYDSNEDSLSFNLDIFPSGMSYKYGILKGSMHIILQGKTSSTMLFPF
                     LKSMIYKNKSENSSEKIFTLMINQKKHYKLIANLS"
     gene            complement(7535..>7694)
                     /locus_tag="RJ336_001358"
     CDS             complement(7535..>7694)
                     /locus_tag="RJ336_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213797.1"
                     /translation="VFIIVTRYEKKIKLLNQNIQNMKEDIADLKETTQKNRSLIEKNR
                     SNIENIIK"
BASE COUNT         2760 a          913 c         1405 g         2616 t
ORIGIN      
        1 aaagatgaaa aaaattcttg taagtgtttt aagttcttgc ttattggctt cggctttaag
       61 tgctgtatct tttaaagaag atggtttaaa ggtttctttt gagggatata aaactaaaga
      121 tatgatagga acaaaaggtg aatttaaaaa tgtagaatat aaattttcta aaaatacaaa
      181 ggatttggca agttatctta aaggcgctaa agctaccata aagccaagta atgcttttat
      241 gggtgaaggc aatgatatta taaccaataa tatcacaaaa gtatttttcc ctgctttatt
      301 gggagatacg gatattaaag ttgtttttca agatgtgatt gcgggtgaaa ataaaggcgt
      361 tatttcagca aaaattacta tggataaaaa aagtactatt gtgcctttaa cttataccat
      421 caaagataat aaatttgaag ctaaaggaca acttgatttg catactttta aaaatggttc
      481 taaagcatta aaagcattaa gcgatgtggc tgcaggacat ggtggaattt cttggccttt
      541 agtggatatc agttttaatg ctgatttagc agaataaaaa gtagccttag ggctacttta
      601 aaatacaata ttttcttaaa ttattttcaa aaatttcata atcttttata ttttcaagtt
      661 cttgataaat ttcactacct ttccataaaa taaaaaccgt attttcatct tttagatttt
      721 tgcaaatttc aagcaaaggc ttgacatcca ttaaggctct tgaagtgatg atatcggctt
      781 taaagatatt ttggtattct tgaacttttt ctttgtaaat atgtaaattt gaaagttcgc
      841 attctatttt tagtgtccgc aaaaaggcag cttttttggg attgggttcg aaaagatgaa
      901 aattgttttg cagtaaaaaa gctaaaaata cagctggaaa tcctgcgcca cttcctatat
      961 cggcaatatt ttttgcttta gaaaaatcat aaaaatctaa aattttaata ctatcaaaga
     1021 tattttcatc tatatttttt aaatgagtaa gattgtgaat gcgattaaat ttagataata
     1081 attctttata aatttttacc ttttcttcaa agttttttaa atcgtagttt tgcaaaaaat
     1141 cataatcttt aaaaatcatt tatttaagat gtcccatttg agtttgtttt atgtttaaat
     1201 actctacatt aaaacgatta ggttctatta aaatcggtat gcgtgtgatg attttttcct
     1261 taatggactc tagtttctcg ggattatttg tgagtaaatt aaccttagaa atttcatagt
     1321 gtttgagtat aaattctaca atttcataag ttctctcatc ggctttaaag ccaagctgat
     1381 gatttgcttt aatcgtatca aaacctttat cttgtaaagc ataagcatta accttgttaa
     1441 aaagccctat accccttcct tcttgcctaa gataaatcac cattccgcca ttcttttcta
     1501 tatattttag tgaaaattca agctgttccc cacaatcaca ctttaaactt cctaaagcat
     1561 ctcctgttaa gcactctgaa tgaattctta gattgagtgt gtcttttgga gtatttttaa
     1621 atatacataa atgttcttta tcattttctt tgaaactttg tatttggaaa tttccccatt
     1681 tgctaggcaa attcgcaatt tctgaaattt ttattttcat ttactactct ctataatcaa
     1741 atttatgtta agattttagc aaaaaaagga caaaaaatgt ttaaaagatt tagaagatta
     1801 aggcttaatg aaaacttaag agccatggta agggaaaatt ctttaagtgt aaatgatttg
     1861 atttatccgc tttttgtggt taatgaaacg gggataaaaa aagaaatttc ttctatgcct
     1921 gatgtgtttc aaatgagttt agatgaaatt ttaaaagagt gtcaaaatgt agttaattta
     1981 ggcattaaag ccattatact ttttggcgtt ttggaaaatg agaaaaaaga cagctgtgga
     2041 agcgatgctt tagatgataa agggcttgtt gcaagaagta taagagagat taagaaaaat
     2101 tttccagatc tttttataat cagcgatctt tgtttttgtg aatacacaga tcacgggcat
     2161 tgtgggatta tcgatccaaa aacaaaaagc gtggataatg atgcaacttt agaaatttca
     2221 gccaagcaag ccttagttca tgcaagagca ggggtagata tgatagcacc tagtggaatg
     2281 atggatggta ttatcactac tttgcgcaaa gctttagata aggaaggttt tgaaaatttg
     2341 cctataatgg cgtattctac taaatttgct tcaagttatt atggtccatt tcgagatgta
     2401 gcagaatcag ctccaagtta tggagataga aaaagctatc aaatggattt tgctaatggt
     2461 aaagaagctt tagaagaaag cttagaagat gaagcgcaag gagctgatat tttgatggta
     2521 aaacccgctc ttgcttatct tgatgtggtt aaagaaatat cccttcattc taacttgcct
     2581 ttgtgtgttt ataatgtaag cggagagtat gctatgttaa aggcagctaa aaatgctgga
     2641 gtgattgatt atgaaaaagt tttatatgaa actatgatag cttttaaaag agcaggagca
     2701 aagcttatca tcacttatca tgccaaagaa ttagctaaaa tgttaaaagg agaaaaatga
     2761 aacatttttt aactttaaga gatttttcca aggaagaaat tttaagtctt gtaaatcacg
     2821 ctagtgagct taaaaaagag cctaaaaaac ttttacaaga taaaactttg gcaatgattt
     2881 ttgagaaaaa ctctacaaga acaagaatgg cttttgaatt agcaataaca gagcttggcg
     2941 gaaaggcttt gtttttaagc agtaatgatt tacaacttag tcgtggcgag cctgtaaagg
     3001 atacagctag ggtgatagga acgatggttg attttgtaat gatgagagtc aataaacacg
     3061 aaactttact cgaatttgca agatactcca aagctcctgt gatcaatgct ttaagtgagt
     3121 tttatcaccc tactcaggtt ttaggagatt tgcttactat taaagaatgg aataaaatgc
     3181 aaaatggtat agcaaaagtt gcttttatcg gagatagtaa caatatgtgc aattcttggc
     3241 ttattgtggc tgcgattttg ggctttgaat ttagtatagc tataccaaaa aactataaaa
     3301 ttagccctga aatttgggaa tttgctatga aacaggcttt gatttcagga gctaaaattt
     3361 ccttaagtca tgataaattt gaagccttaa aggataaaga tgtagtcatt accgatactt
     3421 gggtttctat gggtgaagag aatgaaaaag aacgcaagat taaagaattt gaaggattta
     3481 tgattgatga aaaggctatg agcgttgcca ataaagacgc gatattgctt cattgtttgc
     3541 ctgcttatag gggttatgaa gtgagtgaag aaatttttga aaaacatgca gatgtgattt
     3601 ttgaagaagc aagaaatcgc ctttatgtgg taaaagcctt gctttgcttt ttggataatc
     3661 agagaggaag agaatgaaag agctagaaaa gtatagcact tgcttaaaac gcattgatga
     3721 atttagtcaa aatctaggaa taaagaaaaa agatagaacg atttttaaaa tgaagcaaag
     3781 cgagaatgaa aacgaaaaat gtttagttct tgaaaatgga agttttgatt ctcctgagcc
     3841 ttggtttgtg atcgatgaaa acgatgaaat tcacactttg ctttctttac aaagtcttaa
     3901 gaatatactt gaaagtttaa aacaaagtca aaaagagaat tttgaattgc gtttagaaaa
     3961 ggcgatttat caacaaattc ctgtagattt taacgatgtt tggacggttg ccatggatga
     4021 gatcaagcaa aaggcacaaa atggcaccat ggaagttagt attgatcttg aaaaattaat
     4081 ttctaaaatc aaacaagagc atccaaattt atttgtagat atgcaagcga tgatagaaag
     4141 ggtaaatcaa aatgagagat tataaagctt ttgtaaaata ctctaaagca ggaccacgtt
     4201 atacttctta tcctacagca gtagagttta atacaaattt caaatacgaa gaatatatag
     4261 aaattttaaa aaagcaagat agatctttat cgctttattt tcatttacca ttttgtagga
     4321 gtgcctgtta tttttgtggt tgcaatgtta tttatacagc caaagaagag agtaaagaaa
     4381 ggtatttaac ttatattttt aaagagcttg atattttaaa tactatttta gatactaaaa
     4441 gagaagtagt gcaaatgcac tttgggggcg gaactccaac tttttttagt gctaaacaac
     4501 ttcaaaattt gattttaaaa atcagatctg tttttggaaa tttttctaaa gatgcagaga
     4561 ttagctgtga gatcgatccg cgttttttaa atgaggaaca agccacagtt ttaacgcaaa
     4621 atggctttaa tcgtatcagc tttggagtgc aggattttga tgaaaaagtt caaaaagaaa
     4681 ttcatcgcat ccagcctttt gaattaacac aaaatgcttt aaatcttgta agaagtaaag
     4741 gcataaagtc tgtaaatatg gatttaattt atggtttgcc ttatcaaaat ttacaaagct
     4801 ttacacaaac tttagaaaaa gttatgcttt taaaccctga tcgtttggcg atttttaatt
     4861 acgctcatgt gccttggctt aagaaaaata tgagaaaatt tgatgaaaat accttgccaa
     4921 gtcctgatgt taagcttgaa attttagaat tttgtgagaa atttttaagc aaaaatggct
     4981 ataaaatgat aggaatggat cattttgcaa aagaaaatga tgagcttttt aaagctttag
     5041 aaaatggaac tttgcataga aatttccaag gttatactac taaaggcggt gctgatttag
     5101 tcggtgttgg gcttacaagt ataggtgaag gacaaagaca ttatgcgcaa aattttaaag
     5161 atatgtcaag ttatgaagct gcattagata gaggagtttt accttttgaa agaggcgtag
     5221 ctttaagcga tgatgatgag cttagaaaag cagtgattat ggagttaatg gcaaatttta
     5281 agcttgatat taagtcaata gaaaaagaat tttgcattga ttttcaggag tattttaaag
     5341 aggatttaaa agctttagaa gaatacaaag attttattaa ttttgatgaa aattttatca
     5401 aagtcaatga aacaggtgtt ttgcttataa gaaatattgc tatgtgtttt gatgcttata
     5461 tgaaaaacat tagtgaagat aaaaaagtat tctcaaaaac ggtgtaagat gaaatttagt
     5521 caaataagtg atgcttgtgt taaatgtggc aaatgtatac ctgtttgtac tatacatgaa
     5581 gaaaatcgcg atgaaattac tagtccaaga gggtttttag atcttttagc tgcttataaa
     5641 gagggaagtc tagaacttga taaagaagct aagaaagttt ttgaatcttg ttttttatgc
     5701 accaattgtg ttgaagtatg tccaagtaaa ttaagagtag ataatgccat agaagaagtt
     5761 cgttatgata tagctaaaaa atttggtata gcttggtata aaaaacttat ttttttcttt
     5821 ttaagaagac gcaaaatttt agatttggta gctaagcttg gctatgtgtt tcaaagttgt
     5881 gcgtttaaaa ttcaaaatga gaatgaaaat acaggtatga aggcaagatt ttccatgcct
     5941 tttgttaaaa agggaagatt acttacaagt tttaataaaa aaagtttctt aaattctaat
     6001 ccaaaattta tcaataatga tggagaaaaa accataggtt tttttgtagg ttgtttggcg
     6061 aattattttt acatagatac ggctaatgca gtgcttaaaa tcgctaagga attaaaaatc
     6121 aatgtggatt tgatgaaaga acaagtgtgt tgtggagcgc cgcaattttt tacgggtgat
     6181 tttaaaagtg ttgaagtttt ggctaaaaaa aatattgagt attttgaaaa aaaaatagaa
     6241 aaattagatg ctattatagt tcctgaggcc acttgttcgg ctatgttaaa gatagattat
     6301 gaacattttt ttataatgca aaatgattta gactgggcaa aacgcgcaaa atgtgtgtca
     6361 tctaagatat atatggctag cgagtatttt tataaattta cttctttgga agaaatttta
     6421 aaaacaaaaa ataaatttaa ttatagtatt acttatcacg atccttgcca tgcaagaaaa
     6481 atgcaaggag tttttaaaga gccaagagaa cttttaaaaa caaattatca ttttgtagaa
     6541 atgagtaatt ctaatacttg ttgcggtttt ggcggggtga gtatgcaaac ggattattat
     6601 gatagagctt taagtgtagg gcttaaaaaa gcacaaatga tcgatgaaag taaggctagt
     6661 gtggtaagcg ccgagtgttc agcttgcaga atgcaaattt caaatgcatt agaacaaaat
     6721 tcaagcaagg ttgtttttgt tagtccttta gaacttatag caaaagcttt gtgatgatga
     6781 agatagtatt taaaggcaaa agttctgaat acgaaattca aagatcgtgc ttttgtgttg
     6841 atgcttttgt gattaaagat aagattgaag aacgagatgg cgttgatttt atcacttcaa
     6901 atgtagatct tttggaattt agtgatgaca gttttacttt tgaagaaatt gtaaaacatt
     6961 ttaatatttg tgatactgaa gatatgatta tcgttgaaga ttttgacatg aaatcaaaca
     7021 aagataatca aaaccaagaa gatgatatag aacacaacat cttaaaatcc gaaaaaataa
     7081 tacatgaaaa cacaaaacaa acaagtatgc aatttaaaaa tttaaaattt ttttcaagaa
     7141 tttttaaaaa tgaaaatttt ctttctgatt ttaaagaaag taagcaagaa gttgttacta
     7201 tcaaaaaaca tgaaaaactt gaaattttta aaaatttatc tcaagaagat caagaaatta
     7261 gctttgttaa aattgaaatt ttaaattatg atagtaatga agatagttta agttttaatc
     7321 ttgatatatt tccaagcggt atgagctata agtacggaat tttaaaaggc tctatgcata
     7381 ttattttaca aggtaaaact tctagtacga tgctttttcc gtttttaaaa agtatgattt
     7441 ataaaaataa aagcgaaaat tcaagtgaaa aaatttttac tttaatgata aatcagaaaa
     7501 aacactataa gcttatcgca aatctttctt agttttattt tattatattt tctatattag
     7561 agcgattttt ttcaattaaa gagcgatttt tttgagttgt ttctttaaga tcggctatat
     7621 cttctttcat attttgtatg ttttggttga gtaattttat ctttttttca tagcgagtaa
     7681 cgatgataaa gact
//
LOCUS       DAPWGO010000069         7626 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.070, whole genome shotgun sequence.
ACCESSION   DAPWGO010000069 DAPWGO010000000
VERSION     DAPWGO010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7626)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7626)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7626
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.070"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(227..1174)
                     /locus_tag="RJ336_001359"
     CDS             complement(227..1174)
                     /locus_tag="RJ336_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HDZ5213798.1"
                     /translation="MNTLEIAKEVFEKEAQAILDLAKNLDENFNQAVNLMLNTKGRCI
                     VSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEE
                     ILKIIPAIKKRKIPLIVMCGKKNSTLVKQSDIFLNIAVEKEACPLQLAPMSSTTATLV
                     MGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDL
                     VDVMTSGKLGLCVVLENEKLVGIITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDA
                     DAMASEAEEIMLKHKIKEIVVSKENKIIGIIQLYAIGNV"
     gene            complement(1184..2842)
                     /locus_tag="RJ336_001360"
     CDS             complement(1184..2842)
                     /locus_tag="RJ336_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HDZ5213799.1"
                     /translation="MKKILILFFNCILCFGAVDVSQIISAEDQGSTTTSIDQNLSSNY
                     DIANKENNLTKIHQILVFGAHLFNGNFKNYNQRVYNPDYKIAVGDQISLKIWGAVEFS
                     QVLVVDSQGNIFIPKVGAVNLLGVKNSALVSVIKARVNKIYKSNVFVYADMNAYQNVS
                     VFVTGSVNAPGLYQGLSSDSVIQYLDKAGGINLEYGSFRDIQILRNNSVIKNIDLYDF
                     LLKGQMDLFPFRSGDVILVGNVQNYAFVDGDVQRPFRFELSNDIKTLADLARVSGAKP
                     IVTNAIVKSYGEDHKLDVSAYNKMQFSKVLLRTGDEVEFHPEYVSENITISVNGEHNG
                     LKTLVVGKGTTLEDISKLIKANPQSNMQALQVFRKSVARTQKELINAQLKELETLALT
                     SSSVTAQGAAIRAQQAKTILEFIQRAKQIEPKGQIVIDNPKSYNSVILEDGDTINVPS
                     KNNLIIVQGEVSLPGAFVYDKGKDLRYYINLAGGYGERADTSKVLVIRSNGKAEKYHS
                     GIDMKPGDSVLVLPKVDSENLQIFSMLTQILYQIAIATNVVLNL"
     gene            complement(2844..3962)
                     /locus_tag="RJ336_001361"
     CDS             complement(2844..3962)
                     /locus_tag="RJ336_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDZ5213800.1"
                     /translation="MEENKTLLEKIKDLSIFDSFKIVWFVMIFVVIYYTLIAAPRYVS
                     TMILDVRSTSGESAQTTGILSLLSSTSTASEDLNYLKGYIESSDMLKILDEKIKLKNL
                     YQEQYIDLPFKIWDSSSIESYLKYYQARVKVHTDETTKLLKVEVEGFTPKSAHLIAQT
                     IMQESEKFINEISHKAAREQMAFAENEVQKYKERYQKAQNDLIAFQNKYGVFDPLKQA
                     ETKASLVAQIEANLAQKEAKLLTLQSYMNDAAPEVVALKAEIEAIKKQLLREKSKISA
                     NNSSQKLNDLAAKFQDLTIEATFAQKAYEAALKAYESARIEALRKIKQLVIIQSPDTP
                     ESAKYPERIYDILTAFIVLSLIFGIVKFIKMIIEEHKY"
     gene            complement(3962..4624)
                     /locus_tag="RJ336_001362"
     CDS             complement(3962..4624)
                     /locus_tag="RJ336_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213801.1"
                     /translation="MIKLINLTKSYPLFSGGRHYVFKNFTFEFPENCSIGLMGYNGAG
                     KSTLMRLLSGAELPDSGKIITNKKLSWPLGLNGAFQGSLTARDNAKFVARVYGYKGKE
                     LQEKVKFVEDFAELGKFFDEPMKTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPK
                     FRAKSVKLYKERLSKSKVIMVSHNVTEIKEWCDKIIYMKNGQITVYDDVDEGIAVYQG
                     KA"
     gene            complement(4621..5403)
                     /locus_tag="RJ336_001363"
     CDS             complement(4621..5403)
                     /locus_tag="RJ336_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ5213802.1"
                     /translation="MFNVIHALFFRELKTRFGKNRYLGYIWVVGEPMSVVLLVTIIGT
                     VIREYHHQVMPEGISIFMFLISGIMPFFMFRSIVTQLMNGIGANLSLFAYKPVKPIHV
                     FIARTLLEFCIYFVIFITVLFFAGWFFRLDVFPVHLLGVLFCIFLLMCSAFALGICFA
                     IIWHFIEPLRTLLAYFSIVFYWTSGIIFPTWLMPRPMLDIFYYNPLLHIFELLRFNFF
                     ENYPLQDEYSYFYAIFWILLVLFIGLFTYYYNRQALAAAKKE"
     gene            complement(5475..5882)
                     /locus_tag="RJ336_001364"
     CDS             complement(5475..5882)
                     /locus_tag="RJ336_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213803.1"
                     /translation="MDERILEFIKNEQLLSWAMIDEKGVYTASAFYVFDEKNLAFIIA
                     SHEDTKHIRLASENSSIALNIAKESKIAFLKGVQAKAEFKMASKEQMKIYFSKFPFAK
                     LDKSAKIYTLELFWLKFTNNALGLSKKLEFCKK"
     gene            5957..6520
                     /gene="ciaI"
                     /locus_tag="RJ336_001365"
     CDS             5957..6520
                     /gene="ciaI"
                     /locus_tag="RJ336_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular survival protein CiaI"
                     /protein_id="HDZ5213804.1"
                     /translation="MQINASKNQSFSMDYTTKSGKHLALSMYDNQSVSYANNEEGKTL
                     NLKRQYGFSFTFEGSKLTQNDLDEIKNAMKEVEPMIKDFLANSKVRELKPKEIIESAM
                     QMANVLPTPNDENHQNAIMNNFTNKLSDLLKQNQTDDKDINTSMLEDSKKLLDEVLEQ
                     MKKQLEKQQEKAKENQDKTDDSLNLYA"
     gene            6557..7246
                     /gene="dut"
                     /locus_tag="RJ336_001366"
     CDS             6557..7246
                     /gene="dut"
                     /locus_tag="RJ336_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTPase"
                     /protein_id="HDZ5213805.1"
                     /translation="MTNIEILENMLKLQQKLNDETNGLNWENGYTKEGKLISWRRCIY
                     MECAELIDSFTWKHWKNISSPTNWENVRIEIVDIWHFILSLLLEEYRNKNGNYFKIIA
                     NEVISVSVFQDFCKEEEHPNESDIYGILNDIELIIHKCSGFGFNLGELLSTYFTLAIK
                     CGLNLEILYKTYIGKNVLNIFRQNNGYKDGSYKKTWNGKEDNEVLAQILEQELDFDTI
                     YKKLEEYYKKA"
     gene            7248..>7626
                     /locus_tag="RJ336_001367"
     CDS             7248..>7626
                     /locus_tag="RJ336_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HDZ5213806.1"
                     /translation="MDILKLAIKDFLSLKFLKFALIPLIFSFVLMLFLGVLGFSALLD
                     YFNSLFSVGEDSFWAWFYALHFVQILITIISFLFSGFIVVFASVFLALFITSFLTPFI
                     VKEINQKYYHYDNTNEVSTLKTIF"
BASE COUNT         2694 a         1336 c          970 g         2626 t
ORIGIN      
        1 ttctgtttta attttttaca taacatatga tcctttgaaa tcacatagta aacatatttg
       61 gttttatttt gcaatataaa ttcaaacaaa cataaattat catttaaatc agaattatta
      121 ttaaaataat tatctaataa tatccatttt tttctctcaa ataatttgca tgaagaaaac
      181 aaacgaatta atctcctgta taaataaaaa aaaatactaa aaattttcat acattcccta
      241 tcgcataaag ttgaataata cctataatct tattttcctt agatacaaca atttctttga
      301 ttttatgttt taacatgatc tcttctgctt cacttgccat agcatcagca tcgactactt
      361 taggatttgt actcatgatt tctttggctc taaaatcaaa tcttggttta tcgcttgtct
      421 ttaaagcacg acgcaaatcc ccatcagtga tgatacccac taatttttca ttctcaagta
      481 ccacacaaag ccctagcttt ccactagtca tcacatcaac tagatcatta aattcagtat
      541 caggatgcac tataggaagg ttacttgaaa ccataagatc ttttaccttg gttaaaagct
      601 tacgccccaa actcccccct ggatgaaaaa gggcaaaatc atcaggcttg aaatttctta
      661 ccttcatcaa agcagcagct aaagcatccc ccataaccaa agttgcggtt gtcgaagaca
      721 taggagcaag ctgcaaagga caagcttcct tttccacagc tatatttaaa aatatatcgc
      781 tttgctttac aagagtggaa ttttttttac cacacattac tataagtgga attttacgct
      841 tttttatagc tggaatgatt tttaaaattt cttcagtttc ccctgaattt gaaatagcaa
      901 ttaaaacatc ttcaggagtt agcattccaa gatctccatg caaagcctct cctggatgga
      961 tgaaaaagct tggcgttcct gtacttgcta aagtagctgc tatcttagca cctatatgac
     1021 ccgatttacc cattccactg actatgcaac gccctttggt atttagcatc aaattcacag
     1081 cttgattaaa attttcatct aaatttttag ccaaatccaa aatagcttgc gcttcttttt
     1141 caaagacttc tttggctatt tcaagagtat tcatttttaa accttaaaga ttaagcacaa
     1201 cattggttgc aatagcaatt tgataaagaa tttgagttaa cattgaaaaa atttgcaaat
     1261 tctcactatc tacttttggc aataccaaca cagaatcgcc tggtttcata tctataccac
     1321 tatgatattt ttcagctttt ccattgcttc gtatcaccaa aacttttgaa gtatccgctc
     1381 tttctccata acctcctgca agattgatat aatatcttaa atctttgccc ttatcataca
     1441 caaaagctcc aggtaaagaa acctcacctt gaactatgat gagattattc ttacttggta
     1501 cattaatagt atcaccatct tctaaaataa ccgaattata agactttgga ttatcgatga
     1561 caatttgacc cttaggctct atttgcttag ctctttggat aaattctaaa atcgtttttg
     1621 cttgttgagc tcttatagct gcaccttgag ctgtaacaga actactagtt aaagctagag
     1681 tttcaagctc tttaagctga gcattgataa gttctttttg ggttctcgct acactttttc
     1741 taaacacttg taaagcttgc atgtttgatt gtggattagc cttaattagt ttagaaatat
     1801 cttctaaagt cgttccttta cccacaacca aagtttttaa accattatgc tcgccattta
     1861 cacttatagt tatattttca gaaacatact cagggtgaaa ttctacctca tctcccgttc
     1921 taagtaaaac ttttgaaaat tgcattttat tataagcact gacatcaagt ttatgatctt
     1981 caccataact ttttacgata gcattggtta cgataggttt agcacctgat actctagcta
     2041 agtcagctaa agttttaata tcatttgaaa gttcaaaacg aaaaggtctt tgcacatcgc
     2101 catcaacaaa agcgtaattt tgaacatttc ctactaaaat aacatctccg cttctaaaag
     2161 gaaaaagatc catttgccct tttagcaaaa aatcatataa atcgatattt tttatcacgc
     2221 tattattgcg caaaatttga atatctctaa aacttccata ttctaaattt ataccccctg
     2281 ctttatcaag atactgtatc actgaatccg aactaagtcc ttgataaagt cctggagcat
     2341 taacacttcc tgttacaaaa acactgacat tttgataagc attcatatct gcataaacaa
     2401 aaacattgct tttatagatt ttattaacac gtgcttttat aacacttaca agggcactat
     2461 ttttcacacc tagtaaattt acagctccta ctttagggat aaaaatattt ccttgagaat
     2521 ccaccactaa aacttgcgaa aactcaacag ctccccaaat tttaagactg atttgatcac
     2581 caactgcgat cttataatct gggttataaa ctctttgatt gtaattttta aaatttccat
     2641 taaaaagatg agcaccaaat actaaaattt gatgaatttt tgtaagatta ttttctttat
     2701 ttgctatatc atagtttgag cttaaatttt gatctatgct agttgtagta gaaccttgat
     2761 cctctgctga aatgatttgt gaaacatcca cagctccaaa acataaaata caattaaaaa
     2821 ataaaattaa tatttttttc attttaatac ttatgctcct ctattatcat tttaataaat
     2881 ttaacaatcc caaaaatcaa agataataca ataaacgctg ttaaaatatc ataaattctt
     2941 tcaggatatt ttgcactttc tggggtatct ggactttgga tgatgacaag ttgttttatt
     3001 tttcttaatg cttctattct agcactttca taagctttta aagctgcttc ataagctttt
     3061 tgtgcaaaag tagcctctat ggttagatct tgaaatttag cagccaaatc gttaagcttt
     3121 tgagaagaat tgttagctga aattttagat ttttccctta aaagctgttt tttaatcgct
     3181 tcaatttctg ctttaagtgc tactacttca ggtgctgcat cattcatata actttgtaaa
     3241 gttaaaagtt tagcttcttt ttgagctaga ttagcctcaa tttgtgcaac caaactcgct
     3301 ttagtttcag cttgctttaa aggatcaaaa actccatatt tattttgaaa agcaatcaaa
     3361 tcattttgtg ctttttgata tcgttctttg tatttttgta cttcattttc agcaaaagcc
     3421 atttgctctc tagctgcttt atgagagatt tcgttgataa atttttcgct ttcttgcata
     3481 atagtttgag caatcaaatg agctgatttg ggtgtaaaac cctctacttc aacttttaaa
     3541 agtttagtgg tttcatccgt atgaacctta actcttgctt ggtagtattt aagataagat
     3601 tctatcgagc ttgaatccca aattttaaaa ggcaaatcta tatattgttc ttgataaaga
     3661 tttttaagtt tgattttttc atccaaaatc tttaacatat cacttgattc tatataacct
     3721 tttagataat ttaaatcttc gcttgctgta gaagtactac taagcaaaga caagattcca
     3781 gttgtttgag cactttctcc acttgttgat ctaacatcta aaatcatcgt gcttacatat
     3841 cttggtgctg caatcaatgt ataataaatc acaacaaaaa tcattacaaa ccaaacaatt
     3901 ttaaaagaat caaatatact taaatcttta attttttcta ataaagtttt attttcttcc
     3961 attaagcttt tccttgatac acagctattc cttcatctac atcatcataa accgtaattt
     4021 gtccattttt catatagatt attttatcac accattcttt aatttcagtt acattatgag
     4081 acaccataat cacttttgat ttgcttaatc tttctttata taatttcacg ctttttgctc
     4141 taaatttagg atctccaaca gctcctgctt catcaattaa ataataatca aaatcaaaag
     4201 ccatgctaag tccaaaagct atcctagcac tcattcccga agagtaagtc ttcataggct
     4261 catcaaaaaa ttttccaagt tctgcaaaat cttctacgaa ttttactttt tcttgaagtt
     4321 ctttaccttt ataaccatac actctagcta caaatttagc attatctcta gcagttaaag
     4381 aaccttgaaa agccccattt aatcccaaag gccaagataa ttttttatta gtaattattt
     4441 taccactatc aggaagctcc gctccgctta aaagtctcat gagagtggac ttacctgcac
     4501 cattatatcc catcaaacct atactacaat tttcaggaaa ttcaaaggta aaatttttaa
     4561 aaacataatg ccttccacca ctaaataaag gataagattt tgttagatta attaacttta
     4621 tcattctttt tttgccgccg ctaaagcttg cctattatag tagtaagtaa aaagccctat
     4681 aaataaaaca agcaaaatcc aaaatatagc ataaaaataa ctatattcat cttgtaaagg
     4741 ataattctca aaaaaattaa atcttaaaag ttcaaaaata tgaagtaagg gattataata
     4801 aaatatatca agcattggcc ttggcataag ccaagtagga aatataattc cagaagtcca
     4861 ataaaacact atactaaaat aagctaataa agttcttaaa ggttctataa aatgccaaat
     4921 aatagcaaaa caaatcccca aagcaaaagc tgaacacata agtaaaaaaa tacaaaataa
     4981 aactccaagc aaatgaacag gaaatacatc aagtctaaag aaccaccctg caaaaaaaag
     5041 cacggtgata aaaatcacaa aataaataca aaactcgagc aaagttctag cgataaatac
     5101 atgtataggc tttacaggtt tataggcaaa caaagataaa tttgccccta ttccattcat
     5161 aagttgagta actatacttc taaacataaa aaaaggcata atacctgaaa ttaaaaacat
     5221 aaaaatagaa attccttcag gcataacttg atgatgatat tccctaataa cagttcctat
     5281 aatagtcacc aaaagcacaa cactcatggg ctctccaact acccatatat atccaagata
     5341 cctatttttt ccaaatctag tttttaattc tctaaaaaat aaagcgtgaa ttacattgaa
     5401 catttatttt ctatacctaa caatttacat aaactataat cataactcat ttttttaaac
     5461 aaaatcataa aaatttattt tttacaaaat tcaagctttt tactaagtcc taaagcattg
     5521 ttagtaaatt taagccaaaa aagctctaag gtataaattt ttgcactttt atcaagctta
     5581 gcaaagggga atttagaaaa ataaattttc atttgctcct tgcttgccat tttaaactcg
     5641 gccttagctt gcacaccttt taaaaaggct attttacttt ctttggctat attaagtgct
     5701 atacttgaat tttcactagc taatcttata tgcttagtat cttcatgaga agcgataata
     5761 aaagctaaat ttttctcatc aaaaacataa aaagcactag ctgtataaac acctttttca
     5821 tcaatcatag cccaagataa aagctgctca ttttttataa attctaaaat tctttcatcc
     5881 atattgtaaa aattatacta aaatattttt aaaaataacc gatttttaat ttaaactata
     5941 aatataaggg gaagaaatgc aaattaatgc tagcaaaaac caaagttttt cgatggatta
     6001 tacaacaaaa agtggcaaac acttagcctt atctatgtat gataatcaaa gcgtgagtta
     6061 tgcaaataat gaagaaggca agactcttaa tcttaagcgt cagtatggct ttagctttac
     6121 ttttgaaggt tctaagctca cacaaaatga tcttgatgaa attaaaaatg ccatgaaaga
     6181 agttgaacct atgatcaaag attttttagc aaattctaaa gtcagggaat taaagccaaa
     6241 agaaattata gaatcagcta tgcaaatggc aaatgttcta ccaacaccaa atgatgaaaa
     6301 ccatcaaaat gctattatga ataattttac aaataaactc agtgatttac taaaacaaaa
     6361 tcaaacagat gataaagata tcaacacttc tatgcttgaa gatagcaaaa aacttcttga
     6421 tgaagtttta gaacaaatga aaaaacaact tgaaaaacaa caagaaaaag ccaaggaaaa
     6481 tcaagataag acagatgata gtttaaatct ttacgcttaa atcatataat attaaaaatt
     6541 atcaaggagt ttttaaatga caaatatcga aattttagaa aatatgctca aactccaaca
     6601 aaaactcaac gatgaaacca atggcttaaa ttgggaaaat ggctatacca aagaaggaaa
     6661 actgatcagt tggagacgct gtatttatat ggaatgtgca gaacttatag actcttttac
     6721 atggaaacat tggaaaaaca tttcaagtcc aacaaattgg gaaaatgtac gcatagagat
     6781 tgtcgatatt tggcatttta ttttaagcct tttacttgaa gaatatcgca ataaaaatgg
     6841 aaattatttt aaaattatag ccaatgaagt gatttcagta agtgtatttc aggatttttg
     6901 caaagaagaa gagcatccta atgagagtga tatttatggt attttaaatg atatagagct
     6961 tattatccat aaatgcagtg gctttggatt taatcttgga gaattacttt caacctattt
     7021 tactctagct attaaatgtg ggctaaatct tgaaattctt tataaaacct acataggtaa
     7081 aaatgtttta aatatcttta gacaaaacaa tggctacaaa gatggtagct ataaaaaaac
     7141 ttggaacggc aaagaagaca atgaagtttt agctcaaatt ttagaacaag agcttgattt
     7201 tgatactatt tataaaaaac tagaagaata ctacaaaaag gcataatttg gatattttaa
     7261 aacttgcaat caaagatttt ttaagtctta aatttttaaa atttgcctta attcctttga
     7321 tttttagctt tgtactgatg ctttttttag gagtacttgg cttttcggct ttgctggatt
     7381 attttaattc tttatttagc gttggggagg attccttttg ggcgtggttt tatgcccttc
     7441 attttgtaca aattttaatc accatcataa gttttttatt ttcaggtttt attgttgttt
     7501 ttgcttcggt ttttttagcc ctttttataa cttcttttct tacccctttt atcgttaaag
     7561 aaatcaacca aaaatattac cattatgata atacaaacga agtttcaacc ctaaaaacta
     7621 tctttg
//
LOCUS       DAPWGO010000070         7531 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.071, whole genome shotgun sequence.
ACCESSION   DAPWGO010000070 DAPWGO010000000
VERSION     DAPWGO010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7531)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7531)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7531
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.071"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(174..250)
                     /locus_tag="RJ336_001368"
     tRNA            complement(174..250)
                     /locus_tag="RJ336_001368"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(214..216),aa:Ile,seq:gat)
     gene            complement(259..334)
                     /locus_tag="RJ336_001369"
     tRNA            complement(259..334)
                     /locus_tag="RJ336_001369"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(299..301),aa:Ala,seq:tgc)
     gene            complement(437..1949)
                     /locus_tag="RJ336_001370"
     rRNA            complement(437..1949)
                     /locus_tag="RJ336_001370"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(2430..3167)
                     /locus_tag="RJ336_001371"
     CDS             complement(2430..3167)
                     /locus_tag="RJ336_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ5213807.1"
                     /translation="MIKAFSLLEFVFIILILGIVFNLGSLYLKKDNLLEGAIQILNDI
                     QYTQSLAMMQEGIRVDELAIAKREWFKSKWQIYFIKSAATGYDQTYTIFLDKNGDGNA
                     NLGKTEINIDREIAVDVINHNKLMNSGQSGVISKDDEKTTQRFNITKRFGIEKVEFKG
                     SCSGFTRLVFDEMGRVYSPLKNANYAYEKTLAKNNSDCIIRLLSKKHALCIVIDTLSG
                     YAYIPDFKTLKSQFVNIKNKNYECSKI"
     gene            complement(3160..4386)
                     /locus_tag="RJ336_001372"
     CDS             complement(3160..4386)
                     /locus_tag="RJ336_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213808.1"
                     /translation="MEKIKNYKLIIILLSLDLLALLYGISTLSISADEADIYFGEQGK
                     SLIFSHSLLYYISHFGTFIFGQNDFGLRLPFLFFHFLSCLLLYLLALKYTKTKIDAFF
                     SLLLFVLLPGTVASALLVNAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFN
                     ILFLTFFFFGIYKRNAILFTLSLVLFGASISFYGFDTGGRPRGYFLDTLGIFAACFSP
                     LVFVYFFYTIYRLTFQKYKNLLWFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLL
                     IKTLMQSYRVRLPVFRLRYKIFIECSIIFLIFCYFLIVANQLLYYFINNPNRHFANNY
                     HFAKELALELKKQDVLELATAPSLQKRLRFYGIKNSNKFYLKALKQADKHDMDKKIVK
                     VKLGKYEKVYQILNYD"
     gene            4514..5098
                     /locus_tag="RJ336_001373"
     CDS             4514..5098
                     /locus_tag="RJ336_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDZ5213809.1"
                     /translation="MQTIDQIFQTQIDIKKSIFLSFLCPFKDFKFLIETLKKEHPKAV
                     HFVYAYRVLNDFNQIVEDKSDDGEPKGTSGMPTLNVLRGYDLINAALITVRYFGGIKL
                     GTGGLVRAYSDAANAVINNSSLLSFELKKNISIAIDLKNLNRFEYFLKTYSFNFTKDF
                     KDCKAILHIKLNEKEEQEFEIFYKNFAPFEIEKL"
     gene            complement(5142..5525)
                     /locus_tag="RJ336_001374"
     CDS             complement(5142..5525)
                     /locus_tag="RJ336_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213810.1"
                     /translation="MQVNYRTISSYEYDAISGQYKQVDKQVEDYSSSGKSDFMDILNK
                     ADEKSSGDALNSSNSFQSNAQNSNSNLSNYAQMSNVYAYRFRQNEGELSMRAQSASVH
                     NDLVQQGANEQSKNNTLLNDLLNAI"
     gene            complement(5601..5936)
                     /locus_tag="RJ336_001375"
     CDS             complement(5601..5936)
                     /locus_tag="RJ336_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213811.1"
                     /translation="MMAKFRIQYSAGFGHYTQNHKGFGPTIYIEEVVEFDNGKDYFDY
                     IDFYKTYSKSDDTYFHISFLEDRPLSDKEITIRNEYRKMRDENCKKAKEEFIANNELD
                     VEHLPTHHD"
     gene            complement(5926..7503)
                     /locus_tag="RJ336_001376"
     CDS             complement(5926..7503)
                     /locus_tag="RJ336_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDZ5213812.1"
                     /translation="MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFL
                     KILSGEIESSSGEIVFDEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYEALKEKEKL
                     YMSEEFTDEINERLGELEIITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADK
                     FKVLLAQVLFLGADVLFLDEPTNNLDLEAISWLENELLRHEGTLVVISHDRHFLNKIC
                     TRILDVDFKQIRDFAGNYDDWYMASTLLAKQAELKRDKTLKEREELENFIRRFSANAS
                     KAKQATSRAKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLEFKGIGKAYDKQLFS
                     NLELKIEKNDKIALIGANGVGKSTLAKIIAHAISPDTGSMHLGATIELGYFPQDTSNL
                     ICENLKLYEWLMSEKFKDLDEIRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLML
                     ERPNFLLLDEPDNHLDLESIIALGEALYNFKGVVLCISHDRELVSAFANRIWHLENGK
                     LTDFRGTYQEFLGENDG"
BASE COUNT         2552 a         1438 c         1053 g         2488 t
ORIGIN      
        1 taatctcatt ataaatataa atacataatg tatatgctat ttatatctat taaagtatat
       61 tcttttatag ctaaagataa aaataaatct aagtatagag tttatatttt atatttaatc
      121 tactttatat acttgcttta gattttaaag cttttttatt caaatctttt ttatggtggg
      181 cctaacaaga cttgaacttg tgacctcacc cttatcaggg gtgcactcta accagctgag
      241 ctataggccc ttaataaatg gtggagaata gcgggatcga accgctgacc tcctgcgtgc
      301 aaagcaggcg ctctcccagc tgagctaatt ccccataaac aattagcttt atcatcaatc
      361 tttgaaatct aaacaagaat caattgagtt tatatattga agtaatagtt gtgagactta
      421 ttactttgta ctctagaaag gaggtgatcc aaccgcaggt tctcctacgg ttaccttgtt
      481 acgacttcac cccagtcgct gattccactg tggacggtaa ctagtttagt attccggctt
      541 cgagtgaaat caactcccat ggtgtgacgg gcggtgagta caagacccgg gaacgtattc
      601 accgtagcat ggctgatcta cgattactag cgattccggc ttcatgctct cgagttgcag
      661 agaacaatcc gaactgggac atattttata gatttgctcc acctcgcggt attgcgtctc
      721 attgtatatg ccattgtagc acgtgtgtcg ccctgggcat aagggccatg atgacttgac
      781 gtcgtccaca ccttcctcct ccttacgaag gcagtctatt tagagtgctc ggccgaaccg
      841 ttagcaacta aatacgtggg ttgcgctcgt tgcgggactt aacccaacat ctcacgacac
      901 gagctgacga cagccgtgca gcacctgtct ctaagttcta gcaagctagc accctcatat
      961 ctctataagg ttcttaggat atcaagccca ggtaaggttc ttcgcgtatc ttcgaattaa
     1021 accacatgct ccaccgcttg tgcgggtccc cgtctattcc tttgagtttt aatcttgcga
     1081 ccgtactccc caggcggtac acttaatgcg ttagctgcat tactgagatg actagcatcc
     1141 caacaactag tgtacatcgt ttagggcgtg gactaccagg gtatctaatc ctgtttgctc
     1201 cccacgcttt cgcgccttag cgtcagttga gttccagcag atcgccttcg caatgggtat
     1261 tcttggtgat atctacggat tttaccccta caccaccaat tccatctgcc tctccctcac
     1321 tctagactat cagtttccca agcagtttaa tggttaagcc attagatttc acaagagact
     1381 tgataatccg cctacgcgcc ctttacgccc agtgattccg agtaacgctt gcaccctccg
     1441 tattaccgcg gctgctggca cggagttagc cggtgcttat tccttaggta ccgtcagaat
     1501 tcttccctaa gaaaaggagt ttacgctccg aaaagtgtca tcctccacgc ggcgttgctg
     1561 cgtcagggtt tcccccattg cgcaatattc cctactgctg cctcccgtag gagtctggac
     1621 cgtgtctcag ttccagtgtg actgatcatc ctctcagacc agttaagcgt catagccttg
     1681 gtaagccatt accttaccaa ctagctgata ctatatagtc tcatcctaca ccgaaaaact
     1741 ttccctactc aacttgtgtt aagcaggagt atagagtatt agcagtcgtt tccaactgtt
     1801 gtcctcttgt gtagggcaga ttaactatac cttactcacc cgtgcgccac taatccactt
     1861 ctagcaagct agaagcttca tcgttcgact tgcatgtatt aggcacgccg ccagcgttca
     1921 ctctgagcca ggatcaaact ctccataaaa aattatagat agtttaatct ttttcttcaa
     1981 agaaaaagtt atgaaagatt aaaagaaaag tttttaatct ttttcattat tagattgaat
     2041 agattttaca taattgctta tgcctaaatc tttatctggc tcaatcgatc acttatttag
     2101 atttcaaaga ttgactaata agatttgaat aacaatacta aattaaaaga acaaaacaaa
     2161 aaatcatttt taaaagaaaa gtttttaaat taaaaaacaa gatttataaa aaagctttta
     2221 gtttataaga taaaaaccaa aagagttaat ttataaaatc tactaagcta gtgaaacttt
     2281 ataatttaaa agattttaag tccttttttt caaaaaagga aatgaaagta taaccaatta
     2341 aacttaaaag gggattaaac aaaggattaa atagtataaa tatttgtgta agtatttata
     2401 taagtatttg gtgggtttaa aaatgggggt tatattttag agcactcgta atttttattt
     2461 tttatattaa caaattgact tttaagtgtt ttaaaatctg gaatataagc ataaccgcta
     2521 agcgtatcta taacgataca aagagcatgc ttttttgata acaaacgtat aatgcaatct
     2581 gaattattct ttgctaaagt tttttcatat gcataattgg cattttttaa tggagaatac
     2641 actctgccca tttcatcaaa taccaatcta gtaaatcccg aacaagatcc tttgaattca
     2701 accttttcta ttccgaatct tttcgtaata ttaaatcttt gtgtagtttt ttcatcatct
     2761 ttactaataa ctccactttg acctgaattc attaatttgt tatgattgat tacatcaaca
     2821 gcaatttctc tatctatatt gatttcagtt ttgcctaaat tagcatttcc atcgccattt
     2881 ttatccaaga aaatagtata tgtttgatca taacctgtag cagctgattt tataaaataa
     2941 atctgccact tacttttaaa ccactctctt tttgcgatag ccaactcatc aactcttatg
     3001 ccttcttgca tcatggctaa actttgggta tattggatat cattaagaat ttgtattgca
     3061 ccttctaata gattgtcttt ttttaagtaa agactgccta aattaaaaac tatacctaaa
     3121 atgagaatta taaacacaaa ttccaacaaa ctgaaagctt taatcatagt ttaaaatctg
     3181 atatactttt tcatattttc caagttttac tttaacaatt tttttgtcca tatcatgctt
     3241 atcggcttgt tttaaagctt ttaaataaaa cttattgcta ttttttattc cataaaatcg
     3301 caatcttttt tgcaaacttg gggctgttgc aagctctaaa acatcttgtt tttttaattc
     3361 tagtgccaat tctttagcaa aatgataatt attggcaaaa tgacgatttg gattgtttat
     3421 aaaataatac aataattgat tagcgacgat taaaaagtaa caaaatatca aaaaaattat
     3481 agaacattct ataaagattt tataccttaa tcgaaaaact ggcaatctca ccctataact
     3541 ttgcattaaa gtttttataa gcaaaggagt gcaaataaca caaaaaggca aaaaatcatc
     3601 taaaaaaagt ttttgtctta aagaaagcaa caaacaaaat acaaatgtta cgctcattaa
     3661 aaaccataat aaatttttat atttttgaaa agtcaaacga taaatagtat aaaaaaagta
     3721 cacaaaaacc aaaggagaaa aacatgcagc aaaaattcct aaggtatcta aaaaataacc
     3781 tcttggacga ccacctgtat caaaaccata aaaactgata ctcgctccaa acaaaacaag
     3841 agataaggta aataaaatag catttctttt ataaatccca aaaaagaaaa aagttaaaaa
     3901 taaaatatta aaagatttat caacaaataa tactataatc aataatatat aaaaaagcca
     3961 ttttttttca tattcgtaag cacataatat agcaagggtt aaaaaaatca ccaaagatgc
     4021 ggcattaacc agtaaagcac ttgcaacagt acctggtaat aaaacaaata acaataaaga
     4081 aaaaaaagca tcaattttag ttttagtata ttttaaagct agcaaataca aaagcaaaca
     4141 acttaaaaaa tgaaaaaata aaaaaggaag ccttaaacca aaatcatttt gcccaaaaat
     4201 aaaagttcca aaatgagata tataataaag caaactatgg gaaaaaataa gtgatttacc
     4261 ctgctcacca aaataaatat cagcttcatc agcactaata ctcagtgttg aaattccata
     4321 aagcaaagcc aacaaatcaa gactaagtaa aatgatgata agtttataat ttttgatttt
     4381 ttccataatg aaaattttac aaaattaaac ttaaaatatc aatgcaaatc atataaatat
     4441 caaatatctt aaaaattaac atcaaattga ttttagtttt tataagtata attttaaaca
     4501 aaaaaaggca aaaatgcaaa ctattgatca aatttttcaa acacaaatcg atattaaaaa
     4561 atctattttc ttatcttttc tttgcccttt taaagatttt aaatttttaa tagaaacgct
     4621 aaaaaaagag catccaaaag ctgttcattt tgtctatgct tatcgtgttt taaatgattt
     4681 taatcaaatt gtagaagata aaagcgatga tggagagcct aaaggaactt ctggaatgcc
     4741 aactttaaat gttctaaggg gctatgatct tatcaatgcg gctttaatca ctgtaagata
     4801 ttttggcggt ataaaacttg gtacaggggg acttgtaaga gcttatagcg atgcagcaaa
     4861 tgccgtgatt aataattctt ctttactttc attcgaattg aaaaaaaata tatccattgc
     4921 tattgattta aaaaatttaa atcgttttga atatttttta aaaacttatt cttttaattt
     4981 cacaaaagat tttaaggatt gcaaagctat attacatatc aaattaaatg aaaaagagga
     5041 gcaagaattt gaaatttttt ataaaaattt tgcacctttt gaaatagaga aattataaat
     5101 tcttgcaagt aaatacaaaa gctccaaaat ggagcttttg attaaattgc gttcaataaa
     5161 tcatttaaca aagtattatt cttactttgt tcatttgcac cttgttgcac aagatcattg
     5221 tgaacgctag cactttgagc tctcatagac aactcacctt cattttgtct aaaacgataa
     5281 gcgtaaacat ttgacatttg agcataatta cttaaatttg aatttgagtt ttgcgcattg
     5341 ctttgaaaac tattgctaga atttaaagca tctccgcttg acttctcatc cgccttattt
     5401 aatatatcca taaaatcaga ttttccagat gaagaataat cttcaacctg tttatccacc
     5461 tgtttatact gaccactaat agcatcgtat tcatacgagc tgatcgttct ataatttacc
     5521 tgcatagttt tctcctttca aaatatgcaa aaactataca agcaaaaagt gttccttttt
     5581 tatgcaaaaa ttaatgtttt tcaatcatga tgagtaggca aatgctccac atcaagctca
     5641 ttattagcta taaattcttc cttggctttt ttacagtttt catcacgcat tttgcggtat
     5701 tcattgcgaa tcgtgatttc tttatcgctt aaaggtctat cttctaaaaa actaatatga
     5761 aaataagtat catcgctctt tgaataagtt ttataaaaat ctatataatc aaaataatcc
     5821 ttgccattat caaactctac gacctcttct atataaatcg taggtccaaa acccttgtga
     5881 ttttgcgtat agtgcccaaa acctgcgctg tattgaattc taaatttagc catcattttc
     5941 tcctaaaaat tcttgataag ttccacgaaa atccgtaagc ttaccatttt ctaaatgcca
     6001 aattctatta gcaaaagcag aaactaactc cctatcgtgg ctgatacaaa gcactacacc
     6061 tttgaaatta tacaaagctt cacccaatgc aataatactt tcaagatcta aatggttatc
     6121 aggttcgtct aaaagcaaga aattcggacg ctctagcatt aaacgagaaa gcattaaacg
     6181 atgtttttca cccccactta aacttgctgc cattttttct tgatcgctgc cactaaaaag
     6241 cattctacct aaacacttgc ggatttcatc tagatcttta aatttttcac tcataagcca
     6301 ttcataaagt ttcaaatttt cacaaattaa attacttgta tcttgaggaa aatatccaag
     6361 ctctatagtt gccccaaggt gcatagatcc agtatctgga cttatagcat gagcgatgat
     6421 ttttgccaaa gtacttttac ccacaccatt tgccccaatc aaagcgattt tatcattttt
     6481 ttctattttt aactccaagt ttgaaaatag ttgtttatca taagccttgc ctataccttt
     6541 aaattctaaa acttcattac ctatttcacg attggttcta aacactatac taggatctct
     6601 acgacttgaa attttaatct cttcaagctc tagtttttca agtgccttag cacggctcgt
     6661 agcttgtttt gccttagaag cattcgcact aaaacggcga atgaaatttt ctaattcttc
     6721 tctttctttt aaggttttat cacgtttaag ctcagcttgt tttgccaaaa gcgttgaagc
     6781 catataccaa tcatcgtaat ttcccgcaaa atcacgaatt tgtttaaaat ccacatccaa
     6841 aatccttgtg caaattttat ttaaaaaatg tctatcatga gagataacaa ccaaagttcc
     6901 ttcatgtctt aaaagctcat tttcaagcca agaaatcgcc tctaaatcaa ggttatttgt
     6961 aggctcatct aaaaaaagca catccgcacc caaaaataaa acttgagcta gtaagacttt
     7021 aaatttatcc gcactttgca aggtgctcat caaagcatca aaatctttaa tctttaaaga
     7081 acttaaaatt ttttcacaac gcgtttcaca atcataattt ggatcttctt cagccgttat
     7141 tatctcaagc tcacctaaac gctcattgat ctcatctgta aattcctcgc tcatataaag
     7201 cttttctttt tcttttaaag cctcatataa acgcttattt gcacacatca ccgcatcttt
     7261 gatggtgtag ttttcaaaag caaattgatc ctgtcctaaa actgcgattt ttaaaccttc
     7321 atcaaatact atttcaccac tacttgactc aatttctcct gaaagaattt ttaaaaaagt
     7381 cgattttcct gcaccattag caccaataag tccgtatctt tgtcctctaa caagctttaa
     7441 attaacattt tcaaataaaa gctgatttgc aaaacgcata gtaagatttt ttacttcaac
     7501 catgattttc cttaaatttt ttacttataa a
//
LOCUS       DAPWGO010000071         7493 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.072, whole genome shotgun sequence.
ACCESSION   DAPWGO010000071 DAPWGO010000000
VERSION     DAPWGO010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7493)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7493)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7493
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.072"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            1..522
                     /locus_tag="RJ336_001377"
                     /pseudo
     CDS             1..522
                     /locus_tag="RJ336_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344153.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
     gene            452..2380
                     /locus_tag="RJ336_001378"
     CDS             452..2380
                     /locus_tag="RJ336_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213813.1"
                     /translation="MGVENIYTLPLNGVPYISGSVAFDGEAKDNKLILESNTKIDLHN
                     SQYFSDEEGKDIYDKRITRLMGAFGINSNLQNNKVLIDSANIVLHGPDGEYTARSTFE
                     ILGALADVNNLKKYNISKNSVIIKNLNLDLMVNSQNKITFYDAVLFGEIYGGRTLQGN
                     AEKNSIEVYHFNSLDHLNKNIKTHASLNLYGGYSNDGEANGNKIVFRLKKPLKISDNF
                     YGKNYYNLYGGFATEGANFNVIDIQNDLTYEKVPQNYSDKFTVYAARTLSGKANNNIL
                     SIKDSVISLPLYAFITSETTLDGIDYIADESNNNEVNFENIKSSKNLSLMINAKNVSN
                     NKINYNLIQSLTEASSLGKGSKIILKATQNANNNLIKLKDCSSAAVESSCIIKADKES
                     AFNKIIINNTAFSTASDKRQGYVGLIAGVSANSHDNIMELVNLNIDEYKNQDAIFLAP
                     SGTSDISNFKSYNNTLYLGGELNFFKDVNIDLLSGSVFHEVNKKGKIITQILPHQEDF
                     SKNNRLIIDTQDVKSEVVNNFENFTFILPNKIKNPILTIEKLINLPANGSMEILTKNK
                     PTKGKYILIQSDVGIYDGDNRLLNQQELENLLEKMKNNKNKFNYNKIEKLAKSTLKNV
                     NFSFEVSDDAKIIYINIL"
     gene            2392..4407
                     /locus_tag="RJ336_001379"
     CDS             2392..4407
                     /locus_tag="RJ336_001379"
                     /inference="COORDINATES: protein motif:HMM:NF017658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HDZ5213814.1"
                     /translation="MKKMSKHIVLSFAVSSLLFSQAYALPQGGKFTHGTSGTIHTSGN
                     TVTITGKGQNHVIQWGGGFNIGQNESVNFNGKNQNYLNIAYQKDASKIDGALNGGNNN
                     IFLVNPMGVLIGKTGTITAGKFVASTTPLSDDNVKTFLEKGAGFSPAFDVSKQGNIIN
                     LGKINADNIVLIGNKVEIGVGAELAGQDGQTNAKTAHLIGNYVYVSVGKDKENKNTIK
                     IDKDGFKGTAIVEGFMQRDMTSFANDKYQFGDFGTILKSSCNGKESQNFYKAITIGGW
                     ENDKNIQEWILFSNGWNKDELNGIFKDDLTTVRLVSDIDFGYKNAVDPVGASKYAFSG
                     IFDGGNYTLKNILINAQNTDKGWNTGIFGKVEGKDGNNKAKIYNLNVDGLKFSGKTNS
                     GGAFVGQSSNADFSNIHLKNIGDLIFFDPNSKNETSGFLYGGGFVGYAKSGSSFNRIS
                     LDNFSKIALQPEGKFSSAYIDIYLGGFAGYSEGSNFSNILLNNIGGVTILGSETGGNI
                     FAGGFVGYAGDKSYFSQIDLKNIGSVQADGKTFVKHAGAGGFAGAINGTNSFEKISLI
                     NFGDIIAKRGYVWVVNGNFKVGSGGFIGLLNPLDDKILYVDFKNILLNFDQKMQIYAK
                     AGDGASSYFPDLNNWEYNFSGGFFGDCLHQKLGEQILIIFNLNLDKM"
     gene            4659..5540
                     /locus_tag="RJ336_001380"
     CDS             4659..5540
                     /locus_tag="RJ336_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213815.1"
                     /translation="MKDMEINKQIIAILEKDGVVSKDYNNGYVSYYDGNAKITPEVPD
                     FKDPVLSQNDFDPKLLQRILDDLMNGKYTYDFDTKTWTYTDSKGVVGKDEASEITQSL
                     NFLNAFKDTGVEQEFINLWKNSQDQNYKNYANLYEKWTQKKTAMDKIKTGEGYFASFK
                     EELQKYQEALAQLDKENKNYEKIKESGLVSDETLKVMYEKLLEQKEALEKQFADLSGN
                     EGFHYKLENEILNSQGFAINGSDVDGKAYIGNFNFKGKLASLPEKPNISIYEPDKQGG
                     EDPANLLYCRLKFLKRL"
     gene            5510..5695
                     /locus_tag="RJ336_001381"
     CDS             5510..5695
                     /locus_tag="RJ336_001381"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213816.1"
                     /translation="MPPEIPEKVVEAPIKIQTEVDAKKEEDDDQVEIGEADARSSGLR
                     CIVSDNFKTMNICVNAK"
     gene            5705..7393
                     /locus_tag="RJ336_001382"
     CDS             5705..7393
                     /locus_tag="RJ336_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDZ5213817.1"
                     /translation="MRKILVVLVLLQVFSHAEELNNNKIRELIESSPEANEPQNKNLK
                     NTLKNQKSPVNFKEQNTTNITNSQTDQNEAKVFVREYVLHIDNKDLTFKKLRISEKEI
                     QDAIAEYRNQELSLQNLKDITNIIAYYCQVSGYPSATAYIPPQDLSSNKVQINIAFGT
                     LGKVIIKNNSGVRDYALESKLNKNLKGKVITTKNVENEIYKINEIYGIQTNANLQSGD
                     GYGESDVIIEVNKGDSATLTLYSNNYGTKETGRFRAGMSQSLNNIARQGDNLNFYLQD
                     SDENQIDYGINYSTFIGNLKITPFATQGHYVLGGIYRNLGFYGDSMNVGVNFSYPVFL
                     YTEYSLYLVSGFTHKKIKDYYLDGLVSNEKASNSVNLGIEGTYKGLENNVLSYTLNFT
                     YGNVENDGDSSGFNGVNLGNFGKMNLNLSNEYQFQERLTHIFQLNYQKVIGGAVLDSS
                     ESVSLGGPYGVRAYLEGEGSADNVVSGTLGIRFQTPLEGLYLTPFYDIGYSWYENKEY
                     QSENHYFMDAMGMQILYTRSANFYVKMDAARAVHRFKHDGEHRARVYVSLGKYF"
BASE COUNT         2846 a          888 c         1342 g         2417 t
ORIGIN      
        1 taaaaaaaat taatggaaaa aatttctatg cttctaagtc aaaatatcct atattaaatt
       61 taactatgat ttataataac cctaaatctg gaaataaaaa tttatgcaag cttgaaattt
      121 taactccgga tacttcaaaa gaagagatca taacagcttt tagcacttta ggaaccgtat
      181 cttcagatac tcaagccgtt cctagttctt ttatgccttt tattgtaaca gcttatgctc
      241 aaaatacaaa tgcaacaaat aataaactta tattagaaaa tggagaatta tcttctgtgt
      301 atttttgcaa accaagcata ggggattgtg gagtacctaa taattctcaa aaaggcgatc
      361 gttttaagta tttaattact gcggcgttta ctgacagggg gggggggatt taacaatcaa
      421 accattttaa aagaaaactc ctatatcaat aatgggtgta gaaaatatct acaccttgcc
      481 cttaaatgga gttccttata tttcaggatc tgtagctttt gatggtgaag ctaaagacaa
      541 taaattaatc ttagagtcaa atacaaaaat tgaccttcat aattcccagt atttttcaga
      601 tgaagaaggt aaggatattt atgataaaag aattactcgt ttaatgggag cttttggtat
      661 aaattctaat ttacaaaaca ataaagttct tatcgattca gccaatatcg tccttcatgg
      721 gccagatggt gagtatacag ctcgttcgac ctttgaaatt ttgggtgctt tagctgatgt
      781 aaataatctt aaaaaataca atataagtaa aaattctgta ataattaaaa atttaaattt
      841 agatttaatg gtaaattcgc aaaataaaat aactttttat gatgctgttt tatttggaga
      901 aatttacggt ggaagaacat tacagggtaa tgcagagaaa aattctatag aagtttatca
      961 ttttaactca ttagatcatc ttaataaaaa cattaaaaca catgcatcgt taaacctcta
     1021 tggtgggtat tctaacgatg gtgaagctaa tggaaataaa attgtatttc gccttaaaaa
     1081 acctttaaaa atcagtgata atttttatgg aaaaaattat tacaatcttt acggaggttt
     1141 tgctacagag ggtgcgaatt ttaatgttat tgatatacaa aatgatttaa cctatgaaaa
     1201 agttccacaa aattattctg ataaatttac tgtatatgcg gcaagaactt taagcggaaa
     1261 agcaaataat aatatcttaa gtataaaaga ttctgttatt tcattgcctt tatatgcttt
     1321 tattacaagt gaaactacgc tagatggtat agactatatc gccgatgaat caaacaataa
     1381 tgaagtaaat tttgaaaata ttaaatcatc taaaaattta agtttgatga tcaatgctaa
     1441 aaatgtttca aataataaaa taaattataa tctcattcag agtttaaccg aagcgagttc
     1501 tttaggaaag ggctcaaaaa ttattttaaa agcaactcaa aatgcaaata acaaccttat
     1561 aaagcttaaa gattgttctt cggctgccgt ggaaagttcg tgcatcataa aagcagataa
     1621 agaaagtgct tttaataaaa ttatcatcaa caacacagct tttagtactg cctcggataa
     1681 aagacaaggt tatgtggggt tgatagctgg agtgtctgca aattctcatg ataatatcat
     1741 ggaacttgtt aatttaaata tagatgagta taaaaatcaa gatgctatat ttttagctcc
     1801 atctggaact tcggatattt caaattttaa atcttataac aatactttat atttaggtgg
     1861 agagttaaat ttctttaaag atgtaaatat cgatttgctt tctggttctg tttttcatga
     1921 agtaaataaa aaaggcaaaa taatcactca aattctaccg catcaagaag atttttctaa
     1981 aaacaatcgt ttgattatag atactcaaga tgttaaatca gaagtggtaa ataactttga
     2041 aaattttact tttattttgc caaataaaat aaaaaatcct atcttaacta tagaaaaact
     2101 tatcaatctt cctgcaaatg gaagtatgga aattcttact aaaaataaac caacaaaagg
     2161 aaaatatatt ctcatacaaa gtgatgttgg aatttatgat ggtgacaata gattgttaaa
     2221 tcaacaagaa ttagaaaatt tgttagaaaa aatgaaaaat aataaaaata aatttaatta
     2281 taacaagata gaaaagttgg ctaaaagtac attgaaaaat gtaaatttta gctttgaagt
     2341 ttcagatgat gcaaaaataa tttatatcaa catactttaa aggagagtaa catgaaaaag
     2401 atgagtaaac atatagtttt atcatttgcg gtgagttctt tactcttttc tcaagcttat
     2461 gctttaccac aaggaggtaa atttactcat ggtacaagtg ggactatcca tacctctgga
     2521 aatactgtaa cgattacagg aaaaggacaa aatcatgtta tccaatgggg tggtggtttt
     2581 aatataggac aaaatgaaag tgtaaatttt aacggcaaaa atcaaaacta cctaaacatt
     2641 gcttatcaaa aagatgcttc taagatagac ggagctttaa atggtgggaa taacaatatc
     2701 tttttggtta atcctatggg agttttgatt ggcaaaacag gaactatcac tgcgggaaaa
     2761 tttgtagcta gtacgacgcc tttaagtgat gataatgtca aaactttttt agagaaagga
     2821 gctggttttt ctccagcatt tgatgtaagt aagcaaggaa atattatcaa tcttggaaag
     2881 attaatgcag ataatattgt tttaatagga aataaggttg aaataggagt aggagcggag
     2941 ctagcggggc aagatgggca aactaatgct aaaacagctc atttaatagg aaattatgtt
     3001 tatgttagtg taggaaaaga taaagagaat aaaaatacta ttaaaattga taaagatggc
     3061 ttcaaaggca cggctattgt tgagggattt atgcaaaggg atatgacaag ttttgcaaat
     3121 gataaatatc aatttggaga ttttggtact attttaaagt cttcttgcaa tggaaaagag
     3181 agtcaaaatt tttataaagc catcactatt ggtggttggg aaaatgataa aaatattcaa
     3241 gaatggattt tattttcaaa tggttggaat aaagatgaat taaatggaat ttttaaagat
     3301 gatttaacaa ctgtaagatt agttagcgat atagattttg gatataaaaa tgcagtagat
     3361 cctgtgggtg caagtaaata tgcctttagt ggaatttttg atggtggaaa ttatacttta
     3421 aaaaatatac ttatcaatgc tcaaaacaca gacaaaggat ggaatactgg tatttttggt
     3481 aaagttgaag gaaaagatgg taacaataag gctaaaattt ataatcttaa tgtcgatggt
     3541 ttaaaattta gcggaaaaac aaattctgga ggagcttttg ttgggcaaag ctctaacgca
     3601 gattttagca atattcattt aaaaaatatt ggagatttaa ttttctttga tccaaattct
     3661 aaaaatgaaa ccagtggatt tctttatggt ggtggttttg taggttatgc taaaagcggt
     3721 tctagtttta atcgtattag tttagataat ttttctaaaa tcgcactaca gccagagggt
     3781 aaatttagca gtgcgtatat tgatatttac ttaggtggtt ttgctggcta ttcagaaggt
     3841 agtaattttt ctaatatttt attaaacaat attggcggag taacgatttt aggttcggaa
     3901 acaggtggta atatttttgc aggtggtttt gtaggttatg ctggagataa atcatatttt
     3961 tctcaaattg atttaaaaaa tataggtagt gttcaagcag atggtaaaac ttttgtcaag
     4021 catgctggcg caggaggttt tgctggagct ataaatggaa ctaattcttt tgaaaaaatt
     4081 tctttaataa attttggaga tattattgcg aaaagaggat atgtttgggt tgttaacggt
     4141 aactttaaag taggttccgg cggttttata ggacttttaa atcctttaga tgataaaatt
     4201 ttatatgtcg attttaaaaa tatattatta aactttgatc aaaaaatgca aatttacgct
     4261 aaagctggag atggagcttc gagctatttt ccagatttaa ataactggga gtataatttt
     4321 tctggtggat tttttgggga ttgtttacat caaaagttgg gagagcaaat tttaataata
     4381 ttcaacttaa atttggacaa gatgtaagta ttattgctca aaagtttcgt tcaaattcta
     4441 atgaaaaata tcaaggttta ttctatgggt actctgtgaa aaattggaat gatggaatta
     4501 tgaaaacgga taatgttgct atctattatg aaaaaaatta taacactaat caatataatt
     4561 ggtattatca agatatcaaa gatggctttt ttgggagtgc tataaatgat tatgcttaca
     4621 aagatggcag atcatatgaa ttttatgatt ataatgtgat gaaagatatg gagataaata
     4681 aacaaattat agctattctt gaaaaagatg gagtggttag taaggattat aacaatggat
     4741 atgtttctta ttatgatggt aatgcaaaaa ttactccaga agtgcctgat tttaaagatc
     4801 ccgttttatc tcaaaatgac tttgacccta aattgcttca aagaatttta gatgatttga
     4861 tgaatggaaa atacacttat gattttgata ccaaaacttg gacttacaca gatagtaagg
     4921 gtgtggtagg aaaagatgag gctagtgaga tcactcaaag tttaaatttc ttaaatgcgt
     4981 ttaaagatac tggagtagaa caagaattta taaatttgtg gaaaaattct caagatcaaa
     5041 attataaaaa ttacgccaat ctttatgaaa aatggacgca aaagaaaact gctatggata
     5101 aaatcaaaac cggcgaaggt tatttcgcta gttttaaaga agaattacaa aaataccaag
     5161 aagccttagc tcaacttgac aaagaaaata aaaactatga aaaaatcaaa gaatcaggct
     5221 tagttagcga tgaaacactt aaagttatgt atgaaaaact tttagaacaa aaagaagctc
     5281 ttgaaaagca gtttgcggat cttagtggaa atgaaggatt tcactataag cttgaaaatg
     5341 aaattttaaa ttctcaaggt tttgctataa atggaagtga tgtagatggt aaagcataca
     5401 ttggaaattt taattttaaa ggaaaattag cttcattgcc agaaaaacca aatatatcta
     5461 tctatgagcc agataaacaa gggggtgaag atccagcaaa ccttctgtat tgccgcctga
     5521 aattcctgaa aaggttgtag aagctcctat aaaaattcaa accgaagtag acgcaaaaaa
     5581 agaagaagat gatgatcaag tagaaatagg agaagcagat gctagaagta gtggtttgcg
     5641 ttgtattgta agtgataatt ttaagacaat gaatatttgt gtaaatgcaa aataggaaat
     5701 aaaaatgaga aaaattttag ttgttttagt cttattgcaa gtattttcac atgctgaaga
     5761 gttaaataat aataaaataa gagagcttat agaaagctct cctgaagcaa atgaaccaca
     5821 aaataaaaat ttaaaaaata cattaaaaaa tcaaaaaagc cctgtaaatt ttaaagagca
     5881 aaatactaca aatattacaa attcacaaac tgatcaaaat gaagctaagg tttttgtaag
     5941 agagtatgtt ttgcatatcg ataataaaga tttgacattt aaaaaattaa gaattagcga
     6001 aaaagaaatt caagatgcaa tagctgaata tcgcaaccaa gagttaagct tacaaaattt
     6061 aaaagatata acaaacatta tagcttatta ttgtcaagta agtggctatc cttcggcaac
     6121 tgcttatata ccaccacaag atttaagttc taacaaagtg caaattaaca tagcttttgg
     6181 aactttagga aaagtaatca ttaaaaacaa ctcaggtgtg agggattatg ctttagagag
     6241 taaattgaac aaaaatctta aagggaaagt tatcacaact aaaaatgtgg aaaatgaaat
     6301 ttacaaaatc aatgaaatat acggaatcca aaccaatgct aatttacaat caggtgatgg
     6361 ttatggagaa agcgatgtta ttatagaagt aaacaaaggt gatagtgcaa ctttaacttt
     6421 atattctaac aactatggga ccaaagaaac aggtcgtttt agagcaggaa tgagtcaaag
     6481 tttaaacaat atagcaagac aaggggataa cttaaatttt tatcttcaag atagcgatga
     6541 aaatcaaata gattatggga ttaattatag tacttttata ggaaatttaa aaattactcc
     6601 atttgcaact caaggacatt atgttcttgg tggaatttat agaaatcttg gtttttatgg
     6661 ggactctatg aatgttggag taaatttttc ttatcctgtg tttttatata ccgagtattc
     6721 tttatatctt gtttcgggtt ttactcataa aaagattaaa gattattatc ttgatggttt
     6781 agtaagtaat gaaaaagcga gcaatagtgt aaatttaggc atagaaggaa cttataaagg
     6841 tttggagaat aatgtcctaa gttatacctt aaattttaca tatggcaatg ttgaaaacga
     6901 tggtgattct tctggattta atggagtaaa tttagggaat tttggaaaaa tgaatttaaa
     6961 tttaagcaac gaatatcaat tccaagaacg cttaactcac atttttcaac tcaattatca
     7021 aaaagttatc ggtggtgctg ttttagatag tagtgaatcc gtgtctttag gtggacctta
     7081 tggtgtgcgt gcttatttag aaggcgaggg gagtgcggat aatgttgttt ctggcacctt
     7141 aggaataaga tttcaaacac ctttagaagg gctttacttg actccttttt atgatatagg
     7201 atattcttgg tatgaaaata aagaatatca aagcgaaaat cattatttta tggatgcaat
     7261 gggtatgcaa atactctata caagaagtgc taatttttat gtaaaaatgg atgctgcaag
     7321 agctgttcat cggtttaaac acgatggaga acatcgagca agagtttatg taagcctagg
     7381 aaaatacttt taactttggg gtgattggag aaatttctac ccccccccca tttttcaacc
     7441 caccaaatac ttatataaat acttacacaa atatttatac tatttaatcc ttt
//
LOCUS       DAPWGO010000072         7484 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.073, whole genome shotgun sequence.
ACCESSION   DAPWGO010000072 DAPWGO010000000
VERSION     DAPWGO010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7484
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.073"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..846)
                     /locus_tag="RJ336_001383"
     CDS             complement(<1..846)
                     /locus_tag="RJ336_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HDZ5213818.1"
                     /translation="MKEYDKLSIRLVQILSKFNNGESLSAQELAQEFNVDTRTIQRDL
                     NERLTFMPIKKENGRYVLESFALGKLSFKDIQNFATLSGIAKLYPKLDQGFIVDLLSH
                     RVNKVLMVKNEGFQKVDYELFKDLSVAILKHNVLIFFYKEKERQIKPYKLVNYKGIWY
                     LLGDENDKLKHFNLDKISKFRTKNENFIPNEKLEEQIQNDPNIWLGESKEVILKLDKN
                     AKEYFFRKEILSNYQIIDEDETSYTLSTQVSYEDEILHLVKQWIPYIKILAPIELKTR
                     LENILK"
     gene            complement(843..1910)
                     /locus_tag="RJ336_001384"
     CDS             complement(843..1910)
                     /locus_tag="RJ336_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDZ5213819.1"
                     /translation="MNHLLILYNPYYQEDVIKQHLSILQEKSQVAFGKIKSKLNDQEK
                     QNFLEEIYQSTNEENFLQLFLSDYANLFVAKVVKISKNVDESLIPSYYKEKNLEVEDF
                     FIISDLRELVREDFSLLRDKFLANFITPNDHTYAIYGNNYTYPLPVRLKEECSYFLGD
                     EKHYLSVYKSKEYLVMQENFIRFVFGKRIFYLLHPDSISNIIHAELELLQSENDLLND
                     FTSIVVKYSKTLEYEIYAFAKKVLLKACMKDPSLYDLAYNVQGKSFILKDFFTQKPNL
                     GSIKFLLRHENIQCHLGKSLTQFINYPFSKSLTLIQEIRNEAVHAKAPSLNEVKKLRN
                     EILGIEGVSLLKSILTHKEIS"
     gene            complement(1919..2224)
                     /locus_tag="RJ336_001385"
     CDS             complement(1919..2224)
                     /locus_tag="RJ336_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213820.1"
                     /translation="MFSKIFSSLSLANAFKGFLFKRISSPMQSARIISMVLDIKNAFN
                     DSKDQASSICKTLDLIVNFKKEHPQDFNELFEILKDLIQEYEQNPNEIKQNLKEILK"
     gene            complement(2231..2695)
                     /locus_tag="RJ336_001386"
     CDS             complement(2231..2695)
                     /locus_tag="RJ336_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004316478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213821.1"
                     /translation="MNFLSSLKDKAVNASEAIKDKTIKTAEVVKDIGMEVKCGIGWHA
                     GEYQNEKDKPKCFFSKICPDCGKYLTKNQHDFEAPEILNPDNCYGYRRCTLCSIQVFD
                     NFHNYYEIKKDSKCRMHEKCNLCGHERLGQTRHNWKYDESGQKICLDCKETV"
     gene            complement(2699..3481)
                     /locus_tag="RJ336_001387"
     CDS             complement(2699..3481)
                     /locus_tag="RJ336_001387"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213822.1"
                     /translation="MLELITQKDQDFLQNIENLDEEYIQKFINKKISEIAIAIETAAE
                     NADKAKDRTQKAKNLNTDSDWQTYIPIFGRWLGETSEEKKEIKSNMILEVAELQNESM
                     NQMTTILKEVVIFFTSSFCIATRMNQALSLIIAQGFVKSDGKVIRLSKAAKEQFQQIQ
                     KFTLSFIEDHEKHKDTINNIQVELDKKNQIDDEQYKLIEKHYQEFIQYKNYNDKIVQE
                     QECKINELKDILNKRKNVFTNSISILALIVSVASIVLYFIGR"
     gene            complement(3481..4347)
                     /locus_tag="RJ336_001388"
     CDS             complement(3481..4347)
                     /locus_tag="RJ336_001388"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213823.1"
                     /translation="MKIFVYSAFGVVLKDFIEAVVIELKTTFREFGKENIKEIFKRFA
                     RRMEKVWEKIKAKWKDIFKGSLEAGIQAFFSNLLVFIINTIFTTLKKIVQIIRAGFTS
                     LYQAVKIIINPPKNIPKDEIYFEASKIFVSGMISAISMLGSEMIHKFLLSIPGFNVFL
                     SLPIPFTDETIGDALSLCISAAGGAVLSTIAIFYMDKWRSNSKIGNLQIQIVTQKNLI
                     VQYKIAKTWFALNDAYHIVKNETLATIQQIKKDNQIREQSSQEVETAIEEFENCNITK
                     KLYKKLNQTKEN"
     gene            complement(4419..5163)
                     /locus_tag="RJ336_001389"
                     /pseudo
     CDS             complement(4419..5163)
                     /locus_tag="RJ336_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855141.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5239..5445)
                     /locus_tag="RJ336_001390"
     CDS             complement(5239..5445)
                     /locus_tag="RJ336_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213824.1"
                     /translation="MGIILGILSLIAGFVAIVLMCSLYFIVFMVFVGMAILIFLSMQP
                     YPYNIIFCAIYLITILALVLWRKT"
     gene            complement(5436..6038)
                     /locus_tag="RJ336_001391"
     CDS             complement(5436..6038)
                     /locus_tag="RJ336_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213825.1"
                     /translation="MFYTFFVILKQGEKMLKQIAFGGIALTATGYGIKKLYEKLSKPE
                     RKFDTHAIVPSCKDMINTEEYKLKRELEVEQKKNQIQEFLCECMECYSGFSKYFNSKE
                     FLEFEQNFTSKNNHKTEFLLSSYKDQMIKVIDYAKKFECLSAFLETQSEKNDLAVVKM
                     ISESMERKTQRFYLQTKFQTFPQYIFPSVWSSPMWNKQWE"
     gene            complement(6098..7474)
                     /locus_tag="RJ336_001392"
     CDS             complement(6098..7474)
                     /locus_tag="RJ336_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDZ5213826.1"
                     /translation="MQQEYYDLDLERAILSSCIMSEEAYASIAGDISPKDFSLKAHQD
                     IFKAVIACSNNKEPISVSFLRKHKKIDEQILAEILATPSMIDLPAYVNELREKSVKRQ
                     LLSFAHLLPTRINEDRAVSEIADEIGKEIFSITNRVNSRDIKDVDMVISELFEEFKKQ
                     KTLENKGIIGLDTGFEGLNKMTKGFKGGELIIIAARPGMGKTTLCLNFIDKILRQKKG
                     VALFSLEMPATQIMQRMLSSKTSIPLQKILTADLNDDEWERLGDACNDYSQKKLYIYD
                     SGYATIADVRAILRRLKSQDESIGLCVIDYIGLMMSNSNFNDRHLQVSEISRGLKLLA
                     RELDMPIIALSQLNRGLEQRANKRPLMSDLRESGAIEQDADAILFVYRDEVYREQEEK
                     ERENKAKAEGKAYQRLFIPNPMQENAEIIVGKNRNGPVGTIEVVFLKEKSCFVDKPIG
                     YETTEFTG"
BASE COUNT         2317 a         1269 c          975 g         2923 t
ORIGIN      
        1 ttttaaaata ttttccagcc gtgttttcag ttctataggg gctagaattt ttatataagg
       61 aatccactgc ttaaccaaat gcaaaatttc atcttcatag gaaacttgag tgcttaaagt
      121 atagcttgtt tcatcttcat caatgatttg ataattactt agtatttctt ttctaaaaaa
      181 atattcctta gcatttttat caagttttaa aatcacttct ttactttctc caagccagat
      241 attaggatca ttttggattt gttcctcaag tttttcattg ggaataaaat tttcattttt
      301 agtgcgaaat tttgaaattt tatccaaatt aaaatgtttt aatttatcat tttcatcccc
      361 taaaagatac caaattcctt tgtaatttac gagtttgtaa ggtttgattt ggcgttcttt
      421 ttccttgtag aaaaaaatca atacattgtg tttgagtata gctacactaa gatctttaaa
      481 aagctcataa tccacctttt gaaaaccttc gttttttacc atcaaaactt tatttaccct
      541 atggcttaaa agatcaacta taaagccttg atcgagtttt ggataaagct tagcaatacc
      601 acttaaggtg gcgaaatttt gtatatcttt aaagcttaat tttcccaaag caaagctttc
      661 taaaacatat cttccatttt cttttttaat aggcataaaa gtaagtcttt cgttaagatc
      721 tctttgtatg gttcttgtat cgacattaaa ctcttgtgca agctcttggg cgcttagact
      781 ttccccattg ttaaattttg ataaaatctg caccaagcgt atgcttaatt tgtcgtattc
      841 tttcatgaaa tttccttgtg ggttaaaatg ctttttaaca aacttacgcc ttctatacct
      901 aaaatttcat ttctaagttt tttgacttca tttaaacttg gagcttttgc atgaacggct
      961 tcattgcgga tttcttgaat gagagtaaga ctttttgaaa aaggataatt gataaattga
     1021 gttaaacttt ttcctaaatg acattggata ttttcatgtc tgagtagaaa tttaatactt
     1081 ccaagattgg gtttttgggt aaaaaaatct ttaagtataa aagatttacc ttggacatta
     1141 taagctaaat cataaaggct aggatctttc atacaagctt ttaaaagaac ttttttggca
     1201 aaagcgtaaa tttcatattc taaggttttg gagtatttga ctacaatgct tgtaaaatca
     1261 tttaaaagat cgttttcgct ttgtaaaagc tctaattctg catgaatgat attgcttatg
     1321 ctatcagggt gcaagagata aaaaatcctt ttgccaaaaa caaagcgtat gaaattttct
     1381 tgcatgacta ggtattcttt gcttttatac acacttagat aatgcttttc atctcctaaa
     1441 aaataagaac actcttcttt taatctcaca ggtaaaggat aggtgtaatt attgccatag
     1501 atagcatagg tgtgatcgtt tggggtgatg aaattggcta aaaatttatc tcttaaaaga
     1561 ctaaaatctt ccctgaccaa ttctcttaaa tcactgataa taaaaaagtc ttccacttct
     1621 aaattttttt ctttataata actaggaatc aaactttcat caacattttt agaaattttt
     1681 accaccttag cgacaaataa attagcataa tcgcttaaaa aaagttgtaa gaaattttct
     1741 tcatttgtac tttggtaaat ttcttctaag aaattttgct tttcttgatc gttgagtttt
     1801 gatttgattt tgccaaaggc aacttgggat ttttcttgta aaatgcttaa atgttgcttg
     1861 atgacatctt cttgataata gggattataa aggattaaaa ggtggttcat gctttgcctt
     1921 attttaggat ttctttgaga ttttgcttga tttcattagg attttgctcg tattcttgta
     1981 tgagatcttt taaaatttca aacaactcgt taaaatcctg cggatgttct tttttaaaat
     2041 ttactatcaa atccaaagtt ttgcaaatac tacttgcttg atctttgctg tcattaaaag
     2101 cattttttat atccaaaacc atactaataa tacgagcact ttgcataggg cttgaaatgc
     2161 gtttaaataa aaatccttta aacgcatttg caaggctaag agatgagaaa attttagaaa
     2221 acatctgtct ttatactgtt tctttgcaat ctagacaaat tttttgcccg ctttcgtcgt
     2281 atttccaatt gtgtcttgtt tgtcctaatc tttcatgtcc gcataaatta catttttcgt
     2341 gcattctgca ttttgaatct tttttgattt cataataatt atgaaaatta tcaaacactt
     2401 gaatagaaca aagagtacat cgtctatatc cataacaatt atcaggattt aatatttcag
     2461 gagcttcaaa atcatgttga ttttttgtaa gatattttcc acaatcaggg caaattttgg
     2521 aaaaaaaaca ttttggttta tctttttcat tttgatattc acccgcgtgc caaccaatcc
     2581 cacattttac ttccattcca atatctttaa caacttcagc agtcttaata gttttgtctt
     2641 taattgcttc tgaagcattt accgccttat cttttaaaga acttaaaaaa ttcataaatt
     2701 aacgccctat aaaatataat acaatcgacg caacagaaac tatcaaagct aaaattgaaa
     2761 tgctatttgt aaaaacattt tttcttttat ttaaaatatc tttcagttca ttgattttac
     2821 attcttgctc ttgaacaatt ttgtcattat aatttttata ttgtataaat tcttgataat
     2881 gtttttctat gagtttatat tgttcatcat caatttgatt ttttttatct aattctactt
     2941 ggatattatt tatcgtatct ttgtgttttt catgatcttc tataaaactc agtgtgaact
     3001 tttgtatttg ttgaaattgt tctttagcgg ctttagataa acgaattacc ttgccatcgc
     3061 tctttacaaa accttgcgca ataataagag ataaagcttg attcatacgc gtagcaatac
     3121 aaaaactgga agtaaaaaat attacaactt cttttagaat tgttgtcatt tgattcattg
     3181 attcattctg taactctgct acttcaagga tcatattgga tttaatttct tttttttctt
     3241 ctgatgtttc tccaagccaa cgtccaaaaa ttggtatata agtttgccaa tcactatctg
     3301 tattaagatt tttggctttt tgtgttctat cttttgcttt atcagcattc tctgctgctg
     3361 tttcaatagc tatagctatt tcactgattt ttttattaat aaatttttga atatattctt
     3421 catcaaggtt ttcaatattt tgcaaaaaat cttgatcttt ttgtgtgata agttctagca
     3481 tcagttctcc ttagtttgat taagtttttt gtataatttt ttagtgatat tacaattttc
     3541 aaattcttca attgctgttt ctacttcttg agaactttgc tctcttattt ggttatcttt
     3601 tttgatttgt tgtatagttg ctaaagtttc gttttttaca atatgataag catcattcaa
     3661 tgcaaaccaa gttttggcaa ttttgtattg tactatcaaa tttttttgag ttacaatttg
     3721 tatttgtaaa ttgccaattt tggaattgct tctccactta tccatataaa aaatagctat
     3781 agtgctcaat acagcaccac cagccgctga aatacataaa gaaagggcat cccctattgt
     3841 ttcatcggta aaagggatag gtagtgacaa aaatacatta aatccaggta ttgacagcag
     3901 aaacttgtgg atcatttcac ttcctaacat tgaaattgca gaaatcatcc cgctaacaaa
     3961 aattttcgat gcttcaaagt aaatttcatc ttttggtata tttttaggtg gattaataat
     4021 gatttttaca gcttgatata gagaagtaaa gcctgcacgt atgatttgca ctattttttt
     4081 taaagttgta aaaatagtgt taataataaa aaccaacaaa ttagaaaaaa atgcttgaat
     4141 tcctgcttct aaagaacctt tgaatatatc cttccatttt gcctttatct tttcccaaac
     4201 tttttccatt ctgcgtgcaa atcgtttaaa aatttcttta atattttctt ttccaaactc
     4261 tctaaaggtg gtttttaatt caataacaac agcttcaata aaatctttta agacaactcc
     4321 aaaggcagaa taaacaaaga ttttcattga atctttagca cctgtactta aaacttcatt
     4381 agaatatttg acaatttttt cttttataac tttctttttt aggtttgatt tggctgtatt
     4441 gtaaattttt tcagcttttt tttcatcgat tccatatttt tcaaaattgg tttttcctgt
     4501 ttttggatca atttctttac cccactccat aagatctcta tcacctttag aagcattagc
     4561 acttgcatca agccacttaa gattgtcagg gtgatttgct atttctgccc taattgcatc
     4621 atctaaaaat aaatgcatat taggatctct atcaatttcc tttaaagaaa taacatgatc
     4681 tagttgcgct ttattctttc cagcacccct ttccatttct tcacctgtgt attcactacg
     4741 tacaattttt ggagaattat ctcttatatt atcttttatt ttatcatagt ttgaatctcg
     4801 tttatagcct tgttgatatt ttgtaagctt ttgtaaatct tcttctgttg ctacaatacc
     4861 tttttcaaag ttatgtagtg ttgttacatt cccaccatct tttgcattta atattgttga
     4921 agcgagtcca aaatgccctg tcacagcatc catagcattt ttagtgcatt gttcaaaaag
     4981 tgtttgggtt tgctgttcgg gtaatttttc cattaaatct tcaagttctt taagtgaatt
     5041 ttccaaacct ttatcaattt ctattcttag acattctttt ttagataaat tttccaactc
     5101 tttttctaaa tccgcataat tggcttttaa atccaattct tctaaatgta tataattatt
     5161 catattttaa taattccttg tttttaattt ttatatttta tcaaatcccc ccccccagtc
     5221 aagggggaag tgaaattttt aagttttacg ccatagcact agcgctaaaa ttgtgattaa
     5281 atatatagca caaaatatta tattgtaagg ataaggttgc atagaaagaa aaataagtat
     5341 cgccatacca acaaaaacca taaacactat aaaatataaa ctacacatca acactatagc
     5401 aacaaagccg gctataagac ttaaaattcc aagtattatt cccattgttt attccacata
     5461 ggagaactcc acacagaagg aaaaatatac tgaggaaaag tttgaaattt tgtttgcaga
     5521 taaaatctct gtgtttttct ctccatactt tcgcttatca tttttacaac cgctaagtca
     5581 tttttttcgc tttgtgtttc caaaaaagca cttaagcatt caaatttttt agcatagtcg
     5641 atcactttta tcatttgatc tttataagat gacaaaagaa attctgtttt atgattattt
     5701 ttagaggtaa aattttgctc aaattctaaa aattccttag aattaaaata ttttgaaaag
     5761 ccgctataac actccatgca ttcgcaaaga aattcttgaa tttgattttt cttttgttcg
     5821 acttcaagct ctcttttaag tttgtattct tcggtattga tcatatcctt acagcttgga
     5881 acaatagcat gtgtatcaaa ttttctttct ggcttggata atttttcgta taattttttt
     5941 atgccatatc ctgtagctgt aagagctata ccaccaaatg cgatttgttt taacattttc
     6001 tctccttgtt ttaaaataac aaagaaagta taaaacaccc ttgcgacagg ttgtgtcgta
     6061 aaaaataact ttaaaatatt aaattatttg attaaagcta gcctgtaaat tcagtagttt
     6121 catagcctat aggtttatct acaaaacaag atttttcttt taaaaataca acttctatag
     6181 ttccaacagg cccatttcta ttttttccaa caataatttc agcattttct tgcataggat
     6241 ttggtataaa aagcctttga taagctttac cttcagcttt agctttattc tctctttctt
     6301 tttcttcttg ttctctataa acctcatcgc gatatacaaa caaaatagca tccgcatctt
     6361 gctctatagc tccactttct cgcaaatcac tcatcaaagg acgcttattt gccctttgct
     6421 ctaagccacg attaagttgt gaaagtgcga taataggcat atcaagctcc ctagccaaaa
     6481 gcttaagtcc tcttgaaatt tcactaactt gcaaatgtct atcattaaaa tttgaattac
     6541 tcatcataag tcctatatag tcaatcacac aaagtcctat actttcatct tgagatttta
     6601 aacgccttaa aatagccctt acatcagcga tagttgcata accactatcg taaatatata
     6661 atttcttttg actataatca ttacaagcat ctcctaaacg ctcccattca tcatcgttta
     6721 aatctgcagt taaaattttt tgcaaaggaa tggaagtttt ggaagatagc attctttgca
     6781 tgatttgagt tgcaggcatt tcaagagaaa acaaagccac gccttttttt tgtcttaaaa
     6841 tcttgtcaat gaaatttaaa caaagagttg tctttcccat acctgggcgc gcagcgatta
     6901 ttataagttc acccccttta aaaccttttg tcattttatt tagaccttca aaacctgtat
     6961 caagccctat aataccttta ttttctaaag ttttttgctt tttaaattct tcaaaaagtt
     7021 ctgatattac catatcaaca tctttaatat ctctagaatt cacacgattt gtaatgctaa
     7081 aaatttcttt accaatttca tctgcgattt cacttacagc acgatcttca ttgatacgag
     7141 ttggcaaaag atgcgcaaaa ctcaagagct gtctttttac agacttttcg cgaagttcat
     7201 ttacataagc aggcaaatct atcatagaag gagtagcaag aatttctgct aaaatttgct
     7261 catctatttt tttatgtttt cttaaaaaac ttacagaaat aggctctttg ttattactac
     7321 aagctataac cgctttaaaa atatcttggt gagctttaag actaaaatct tttgggctaa
     7381 tatcacctgc tatactagca taagcttctt cactcatgat acaactgctt aaaatagctc
     7441 gttctaaatc caagtcataa tactcttgct gcactaaatt tcct
//
LOCUS       DAPWGO010000073         7462 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.074, whole genome shotgun sequence.
ACCESSION   DAPWGO010000073 DAPWGO010000000
VERSION     DAPWGO010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7462
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.074"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(21..1271)
                     /locus_tag="RJ336_001393"
     CDS             complement(21..1271)
                     /locus_tag="RJ336_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HDZ5213827.1"
                     /translation="MLKQKITQAPKTKISQTLRSWLPILQANIEDLKENLDKFAEDNP
                     FLNVQDSIQTHDKGKNYFDSFYKHNINSAFVDSKGLAKKSVYELLNEQILPPLFPTNK
                     SQELAKKIIECLNEEGYFEYDEEFLKEYSLEEIERVRARFKFLDPVGVGAKDYKEAFL
                     FALENMELDEDIDEFCRMLIMDFENIQNYTKEPLYKEALAVLKRFSTPPFLEYFEDSR
                     IIVPDIFVYKENGEIKVKINDDYYPEISIQTDGLEHDFLSHYIKEAKNLVDALAMRKA
                     TLYKIGLMIVEYQYDFFMGKEIKPMTFKDLALDLERNASTISRAVANKYLSCERGLIP
                     LRDFFAFALDEEGETSNVGVKEFVANLVKNEDRNKPLSDSKILELIKEEFKVDIGRRT
                     ITKYRKHLNIASSTDRKKLYELEG"
     gene            complement(1271..1999)
                     /gene="lptB"
                     /locus_tag="RJ336_001394"
     CDS             complement(1271..1999)
                     /gene="lptB"
                     /locus_tag="RJ336_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213828.1"
                     /translation="MSKLEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTT
                     TFYMICGLISPSSGKVLLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLA
                     AQIFYKDKKILHDKVEQMLELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLL
                     DEPFAGVDPIAVAEIQTLIKELKRLGIGVLITDHNVRETLAICDRAYVIRSGSLLASG
                     NADEIATNKDVKKYYLGAEFKLLD"
     gene            complement(1992..2399)
                     /gene="tsaE"
                     /locus_tag="RJ336_001395"
     CDS             complement(1992..2399)
                     /gene="tsaE"
                     /locus_tag="RJ336_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDZ5213829.1"
                     /translation="MKEFILAKDEIKTMLQIMPKEGVVLLQGDLASGKTSLVQAWVKF
                     LGLDARVDSPTFSTMQKYENHDICIYHYDIYQEGLEGLLANGLFENFFEKGLHLVEWG
                     GENLKKTLMKFGISTIQIKISIKDDKRKYEIYE"
     gene            complement(2396..2641)
                     /locus_tag="RJ336_001396"
     CDS             complement(2396..2641)
                     /locus_tag="RJ336_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HDZ5213830.1"
                     /translation="MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVIVKASKEVKVG
                     DIITLHFTEYTQKYKVLAIPSTKSIPKNAQNEYVVKL"
     gene            2796..4016
                     /locus_tag="RJ336_001397"
     CDS             2796..4016
                     /locus_tag="RJ336_001397"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDZ5213831.1"
                     /translation="MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGE
                     ELEPARKKALSLGIKEENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIARPLI
                     AKTQAQIALQTGADAVSHGATGKGNDQVRFELGYLAFNPDLKIIAPWREWDLNSREKL
                     LAYAQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDPAHAPEEDMWRWSKSPKDAP
                     NESEIIELDFQKGDLVAINGEKLSPAGLLTKLNELGCKHGIGRLDIVENRYVGMKSRG
                     CYETPGGTILLKAHRALESITLDREAAHLKDELMPKYASLIYNGYWFSPERMMLQALI
                     DESQIHANGRVKLELYKGNVMIIGRESANDSLFNAAYCTFEEDEVYNQKDAAGFIKLN
                     ALRFIIAGKNGRKF"
     gene            4029..4472
                     /locus_tag="RJ336_001398"
     CDS             4029..4472
                     /locus_tag="RJ336_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDZ5213832.1"
                     /translation="MKVLLIKDVKALGKAGEIKEVKDGYGQNFLIAKGFAKAATNEVL
                     RKYESDKKKEAENLRFEIANLEKLKEELSKITLEISKPVGANGSLFGGVTKDEIAHAL
                     KEQSHIEIDKKSLECDTFKSLGLHEVSVKLGHAIHAKFNINIKAE"
     gene            4472..5014
                     /gene="hslV"
                     /locus_tag="RJ336_001399"
     CDS             4472..5014
                     /gene="hslV"
                     /locus_tag="RJ336_001399"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDZ5213833.1"
                     /translation="MFHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNG
                     KVLAGFAGSTADAFNLFDMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVL
                     DRNHIFLLSGTGDVVEPEDGQIAAIGSGGNYALSAARALAKHASLDEEELVKSSLQIA
                     GEICIYTNTNIKTYVIEDEK"
     gene            5011..6330
                     /gene="hslU"
                     /locus_tag="RJ336_001400"
     CDS             5011..6330
                     /gene="hslU"
                     /locus_tag="RJ336_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HDZ5213834.1"
                     /translation="MNLTPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRMQLSPELQ
                     DDIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDL
                     ANAALNLVKNEQREKNKDKIDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEKMRTK
                     LRNGDLDESTIEIEISQNMFDTNPNLPPEMGAMQDIVKVIGVGSKKVKKEMKIKDAKN
                     ALKNEAGEKILDQESIKSEALKRAENEGIIFIDEIDKIAVSSGNSNRQDPSKEGVQRD
                     LLPIVEGSNIQTKIGTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDK
                     ALYEILTRPKNSLLKQYSQLLKTENLELEFDDEAIKEIAKIASRANEEMQDIGARRLH
                     TVIEKLLEDLSFEADEYAGKKFVVDKKMVEEKLGDIIENKDLARYIL"
     gene            6327..7202
                     /gene="era"
                     /locus_tag="RJ336_001401"
     CDS             6327..7202
                     /gene="era"
                     /locus_tag="RJ336_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDZ5213835.1"
                     /translation="MKSGFVSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKA
                     IVMHEKNQIIFIDTPGLHESGATLNQLLVQSAIKSMGDCDVILFVASVFDSTKDYENF
                     LSLNPQVPHIIALNKVDLTDNATLLKKLSEYAKFSQHFKAIIPYSSKKKSYKKGLLDE
                     IVKYLDKHEYFYDPEFLSASSEKELYRDFILESIYENLSDELPYSSEVLIHRTKDTPN
                     LLILEANIITDTNSHKGMLIGKEGATLKRIGKDARFKISKLAQKKVLLKLFVTVKKNW
                     QKDEEFLKKLLNDEN"
     gene            7189..>7462
                     /locus_tag="RJ336_001402"
     CDS             7189..>7462
                     /locus_tag="RJ336_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213836.1"
                     /translation="MMKINSLNKINFIKSTDLLYAQRTGISKEDELFNNLTADFKLSK
                     PFDYQIAFFKHNEIYHCFLAPVYKLKKSRFCFPEPLIFQALFDERFI"
BASE COUNT         2730 a         1242 c         1190 g         2300 t
ORIGIN      
        1 tttgatagat tgatagaatt ttatccttca agttcatata atttttttct atctgtagag
       61 cttgctatat taagatgttt gcgatatttt gtaatagttc ttcgccctat atcgacttta
      121 aattcttctt tgattaattc taaaatttta ctatcgctta aaggtttatt gcgatcttca
      181 ttctttacta aatttgccac aaattcttta acacctacat ttgaagtctc tccctcttca
      241 tcaagagcaa aagcaaaaaa atcacgcaag gggataagtc ctctttcaca acttaaatat
      301 ttatttgcca cagctcttga tatagtcgaa gcattgcgtt ctaaatcaag tgctaaatcc
      361 ttaaaagtca taggttttat ctcttttccc atgaaaaaat catattgata ttctactatc
      421 ataagcccta ttttataaag agtagctttt ctcatcgcta aagcatcaac taaatttttt
      481 gcttctttga tgtaatgact taaaaaatca tgctctaaac catcagtttg gattgaaatt
      541 tcaggataat aatcatcatt gatttttact ttaatttcac cattttcttt ataaacaaaa
      601 atatcaggaa caattatacg agaatcttca aaatattcca aaaaaggggg agtgctaaag
      661 cgcttaagta cagctaatgc ttctttatat aaaggctctt tggtatagtt ttgtatattt
      721 tcaaaatcca taattaacat tctacaaaac tcatcaatat cttcatctaa ttccatattt
      781 tcaagagcaa ataaaaatgc ttctttataa tctttagctc ccactcctac aggatctaaa
      841 aatttaaatc ttgctcttac tcgctcaatt tcttctaagg aatactcttt taaaaattct
      901 tcatcgtatt caaaatatcc ttcctcattt aagcattcta taattttttt tgcaagttct
      961 tgagatttgt ttgtaggaaa taaaggagga agaatctgtt catttaaaag ctcataaaca
     1021 ctttttttgg caagtccttt actatccaca aaagccgaat ttatattatg tttataaaat
     1081 gaatcaaaat aattcttacc cttatcatga gtttgtatcg aatcttgaac atttaagaaa
     1141 ggattatcct cagcaaattt atctaaattt tcttttaaat cctctatatt tgcttgtaaa
     1201 atcggcaacc aagagcgtaa agtttgagaa attttagtct tgggcgcttg ggtgattttt
     1261 tgctttaaca tcaatcaagg agtttaaact ccgctcctaa ataatacttt ttcacgtctt
     1321 tattggttgc aatttcatca gcattcccac tagcaagcaa agaacctgat cttataacat
     1381 aagctctatc acaaatagcc aaagtctcac gcacattatg atcggtaatt aaaaccccaa
     1441 tccccaatct tttaagctct ttaattaaag tttgaatttc agccactgct ataggatcaa
     1501 cacctgcaaa aggctcatca agaagtaaaa acttaggttc gcacatcaag cttctagcga
     1561 tctcgcaacg ccttctttca cctccactta aacttaaacc tttccttaaa cgaataggct
     1621 ctatacttaa gagttcaagc atttgctcaa ctttatcatg taaaattttt ttatctttat
     1681 aaaaaatctg agccgctaaa agcaggttat cttctacgct taaatcctta aaaatactac
     1741 tttcttgagg taaataacct atccctgatc tagctctttt atttaaagga tcttttgtca
     1801 catctaaacc atctaaaaga acttttccac tacttgggga aataagtcca catatcatat
     1861 aaaaagttgt cgtttttcct gcaccatttg gccctaaaag tcctacaact tctccgctat
     1921 taacctctaa agaaattcca tgtataatct tagttttttt aataattttt tctaaattta
     1981 caatttctaa tttactcata aatttcatac tttcttttgt cgtctttaat gctaatttta
     2041 atctggatag tagaaattcc aaatttcatt aaagtttttt tcaaattttc accgccccat
     2101 tcaaccaaat gcaaaccttt ttcaaaaaaa ttttcaaata aaccattcgc taaaagtcct
     2161 tctaaacctt cttgataaat atcataatga taaatgcaaa tatcatgatt ttcatatttt
     2221 tgcatagtgg aaaaagttgg agaatctacc cttgcatcaa gaccaagaaa tttaacccaa
     2281 gcttgtacta agcttgtttt tccgctagcc aaatctcctt gaagcaaaac aacaccttct
     2341 ttaggcatta tttgaagcat cgttttgatc tcatcttttg ctaaaataaa ttctttcata
     2401 attttaccac atattcattt tgtgcgtttt taggaatgct tttcgtgcta ggtatagcta
     2461 ggactttata tttttgagtg tattcagtaa aatgcaaagt gatgatatca cccaccttaa
     2521 cctctttact cgccttaaca ataacgccat taatccccac tacaccactt ttacacatat
     2581 cctcagaaat agctcttctt ttcgtgatat taactacatt taaaaattta tctactctca
     2641 taaaagcaat tttagcaaaa aaaatcaatt tttagaacaa aatttgctta cgcctttgct
     2701 ttatttttta agaaaatagc aagtaaaaac ttttctttaa tgaaatttgg atacaatttt
     2761 acaattttca aatctatttt aacaaaggat atcttatgaa aaatgaagta aaaaaagtag
     2821 ttttagcgta ttctggaggg cttgatacga gcatcatttt aaaatggctt caagatgagt
     2881 ataattgtga agttgtaact tttacagcag atattggtca aggtgaagaa ctcgaacctg
     2941 caagaaaaaa agccctttct ttaggcataa aagaagaaaa tattttcatt aaagatttaa
     3001 gagatgaatt tgttaaagat tatgtatttc ctatgtttag agccaatgcg atttatgaag
     3061 gagaatatct tttaggaaca agtatagcaa gaccacttat agcaaaaact caagcacaaa
     3121 tcgccctgca aacaggtgct gatgcggtaa gccatggcgc cacaggtaaa ggaaatgatc
     3181 aagtgcgttt tgaacttggt tatcttgctt ttaatcccga tttaaaaatc atcgctccat
     3241 ggcgtgagtg ggatttaaac agtcgtgaaa aacttcttgc ttatgcgcaa aaacacggta
     3301 ttgatatttc taagaaaaaa ggaaaatccc cttattctat ggacgcaaat ttacttcata
     3361 tttcttacga aggacttgtt ttagaagatc ctgcacacgc acctgaagaa gatatgtgga
     3421 gatggagtaa aagcccaaaa gacgctccaa atgaaagtga aattatagaa cttgatttcc
     3481 aaaaaggaga tttagtagcg ataaatggag aaaaactaag tcccgcagga cttttaacca
     3541 aacttaacga actaggctgc aaacacggta taggacgcct tgatatagta gaaaatcgct
     3601 atgtaggcat gaaaagccgt ggttgttacg aaactccagg cggtactata cttttaaaag
     3661 cacacagagc acttgaaagc atcacgcttg atagagaagc agcgcactta aaagatgaac
     3721 tcatgccaaa atacgcaagt ttaatttata atggctattg gttctcgcct gaaagaatga
     3781 tgcttcaagc cttaatcgac gagtcacaaa ttcatgcgaa tggcagagta aaactcgagc
     3841 tttacaaagg caatgtgatg attataggac gcgaaagtgc aaatgatagc ttgtttaacg
     3901 cagcttattg tacttttgaa gaagatgaag tgtataatca aaaagacgca gcaggcttta
     3961 tcaagcttaa tgctttgcgt tttatcatcg caggaaaaaa tggaagaaaa ttttaataaa
     4021 ggaataaaat gaaagtatta ttaatcaaag atgtaaaagc acttggaaaa gcaggagaaa
     4081 taaaagaagt aaaagacggc tacggacaaa atttcttaat cgctaaaggc tttgctaaag
     4141 cagctactaa tgaagtttta agaaaatacg aaagcgacaa gaaaaaagag gctgaaaatt
     4201 tacgctttga aatcgcaaat ttagaaaaac tcaaagaaga acttagcaaa atcactcttg
     4261 aaatttcaaa acccgtaggt gcaaatggaa gtttgtttgg tggagtaacc aaagatgaaa
     4321 tcgctcacgc cctaaaagag caaagtcaca tagaaatcga taaaaaaagt ttagaatgtg
     4381 acacttttaa aagtcttgga cttcatgaag taagcgtaaa gctcggacac gcaatccacg
     4441 ctaaatttaa tataaatata aaggcggaat aatgtttcac gcaacaacga ttttagctta
     4501 caaaggcaaa aacaaatccg taatcggtgg agatggacaa gtaagctttg gaaacacagt
     4561 attaaaaggc aatgccgtaa aaataagaaa acttaataat ggtaaagttt tagccggttt
     4621 tgcaggctca acagctgatg cttttaatct ttttgatatg tttgaaaatc tccttcaaag
     4681 ttctaaaggc gatcttttaa aagcagcgat tgacttttct aaagaatgga gaaaggacaa
     4741 atacctaaga aaacttgaag ccatgatgct tgtacttgat agaaatcaca tttttttact
     4801 ttctggtaca ggcgatgtgg tcgaacccga agatggacaa atcgcagcca taggaagtgg
     4861 tggaaactat gcactttcag ctgctagagc cttagcaaaa catgcaagtt tagatgaaga
     4921 agagcttgta aaatcaagcc ttcaaatcgc gggtgaaatt tgcatttata ccaatactaa
     4981 tatcaaaact tatgtgatcg aggatgagaa atgaatctaa ctccaaaaga aattgttaaa
     5041 tttttagatg attatgtcat aggacaaaaa aaagctaaaa aaatcatagc tatagcttta
     5101 agaaatcgct accgcagaat gcaacttagc cctgagttgc aagatgatat agtgccaaaa
     5161 aatatcttga tgataggttc tacaggcgta ggaaaaacag aaatcgctag gcgtttagct
     5221 aaaatgatgg gctttccttt tatcaaaatc gaagcgagca aatatactga agtaggtttt
     5281 gtaggtcgtg atgtagaaag tatggtaaga gatcttgcca atgcggcttt aaatttagta
     5341 aaaaatgagc aaagagaaaa aaacaaagat aaaatcgatg aatttataga aaataaaatt
     5401 ttagaaaaac ttttgccacc tttaccaaag ggtatcagcg atgaaaaaca agaagaatat
     5461 aaaaacagtc ttgaaaaaat gagaactaaa ctaagaaatg gcgatcttga tgaaagcact
     5521 atagagatag aaatttcgca aaatatgttc gataccaatc ctaacctacc tcctgaaatg
     5581 ggtgcaatgc aagatatagt taaggttata ggtgttggca gtaaaaaagt caaaaaagaa
     5641 atgaaaatca aagacgctaa aaatgcttta aaaaacgaag caggagaaaa aatcctagat
     5701 caagaaagta tcaaaagcga agccttaaaa agagcggaaa atgaagggat tatttttatt
     5761 gatgaaatcg ataaaatcgc tgtttcaagc ggaaattcaa atcgccaaga tccaagtaaa
     5821 gaaggggtgc aaagagactt acttcctata gtcgagggat caaatataca aacaaaaata
     5881 ggtactttaa aaaccgatca tattcttttt atcgctgcag gggcttttca tcttagcaaa
     5941 ccaagtgatc ttatccctga acttcaagga cgctttcctt taagagtgga attagatagt
     6001 cttgatgata aagctcttta tgaaatttta acacgcccta aaaattcact tttaaaacaa
     6061 tactctcagc ttttaaaaac tgaaaattta gaacttgaat ttgatgatga agctattaaa
     6121 gaaatagcga aaatagcttc aagagccaat gaagaaatgc aagatatagg tgctagacgc
     6181 ttacatactg tgatagaaaa attacttgaa gatctaagct ttgaagctga tgagtatgcg
     6241 ggtaaaaaat tcgtagtgga taaaaaaatg gtagaagaaa aactcggaga tatcatagaa
     6301 aataaagatc ttgcaaggta tattttgtga aaagtggctt tgttagcatc atagggcgta
     6361 ctaatgcagg aaaaagtact ttaatcaatt ccttattaga agaaaaaatc gccctagttt
     6421 ctcacaaaca aaacgccaca agacgtaaaa ttaaagccat agtgatgcat gaaaaaaatc
     6481 aaatcatttt catcgatacc ccaggacttc acgaaagcgg tgctacgctt aatcaactgc
     6541 ttgtccaaag tgctattaaa tccatggggg attgtgatgt gattttattt gtggcgagtg
     6601 tttttgatag tacaaaagac tatgaaaatt ttcttagtct aaacccacaa gtaccacata
     6661 tcatcgcttt aaataaagta gatttaaccg acaatgctac acttttaaaa aaacttagcg
     6721 aatatgcaaa atttagccaa cattttaaag ctatcattcc ttattcttct aagaaaaaaa
     6781 gctataaaaa aggcttatta gatgaaatag taaaatacct tgataaacat gagtattttt
     6841 atgatcctga atttttaagt gcgagtagcg aaaaagaact ttatagagat ttcatacttg
     6901 aaagtattta tgaaaattta agtgatgagc ttccttatag tagcgaagtg cttatccatc
     6961 gcaccaaaga cacacctaat cttttaatcc tagaagccaa tatcatcacc gatacaaact
     7021 ctcacaaggg tatgcttata ggaaaagaag gggcaacttt aaaaagaata ggcaaagatg
     7081 cacgctttaa aatttcaaaa cttgcacaaa aaaaggtact tttaaagctt ttcgtaacag
     7141 tgaaaaaaaa ctggcaaaaa gatgaagaat ttttaaaaaa acttttaaat gatgaaaatt
     7201 aattcattaa ataaaataaa ttttataaaa tctacagatt tgctttatgc tcaaagaaca
     7261 ggaatatcca aagaagatga actttttaac aatttaactg cagattttaa gctaagcaaa
     7321 ccctttgact accaaatagc tttttttaaa cataatgaaa tttatcattg ttttttagcg
     7381 cctgtttaca aattgaaaaa aagtcgtttt tgctttcctg agcctttaat ttttcaagct
     7441 ttgtttgatg aaagatttat tg
//
LOCUS       DAPWGO010000074         7421 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.075, whole genome shotgun sequence.
ACCESSION   DAPWGO010000074 DAPWGO010000000
VERSION     DAPWGO010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7421
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.075"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            118..1608
                     /locus_tag="RJ336_001403"
     CDS             118..1608
                     /locus_tag="RJ336_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDZ5213837.1"
                     /translation="MLTWMQHHKKYLVVTIWVSTIAFVGAGFLGWGAYDFNLNRSSSV
                     ATVGNEKIGFSEFDTRYRQILSYYNQISNGALTPENAEQLGIKNIALSSLVEDKLLLN
                     FAKDLGIGVNENEILQKLANTREFQDPTGDFNKTIYYELLNANNLTPKDYETQLANEV
                     ITDKLNQIFNIPSKDEELKMLASSYFMQDALSIAKIDYDKKNIKINEEDLKKLWNEHK
                     EDYKTKKIYEISTYFLSVSNEKIDDKELEKFYNQDENKLKYKDFAGKVMDFQSAKNEV
                     AKDYALIQLKNVANAKFLDLKNGKDNFQKDQNISESDVYYPIDLLNKAKNGDVLRPAP
                     YNNGYIIVKLNKVDPIRNKTFEEAREEVLPMYLSEQARKNLEEKAKNSLVNFKGDDIG
                     FVSRDSSRESVKLSDKILNDSEFAYFLMNVFNTDQNSSYVIINDNKAILYKINKQKLD
                     MNSDKFEQYKTMLEQNLRNLKANELKQELVDELKKIYPIKIYYKGN"
     gene            1605..2993
                     /gene="ftsA"
                     /locus_tag="RJ336_001404"
     CDS             1605..2993
                     /gene="ftsA"
                     /locus_tag="RJ336_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDZ5213838.1"
                     /translation="MILNILGIDLGSTQTCAIIAQKDEDGLKIIGFSKSKTNGVKKGA
                     ITNIELASKSIEEAVRSAEMMSGVHYDKVVVSISGAYTKSVDSIGVVNIPNHEIGIKE
                     IHRAVSTAKHTANLPSGYEIIHVLPYNFKVNDLEHVDDPLGMSGNRLEVSTHIVISQE
                     SHIKNLKKAVELADLRVDNIVLSGYASAIACLDDSEKELGAVLIDMGGAICDMVVHTG
                     NSIRYNDCLQIGSINITQDLSMALHTPLKEAEKIKLNYAALSQQPNTLIQIPSMGDER
                     KVNEVSLDIISNVIYARAEETLMILAKILSDNRYANAIGGGVVLTGGMTKLAGIDELA
                     PATFDNRSVRLATARKDLITGFSEIFNDPENTCAIGLCLYGAGYFTPYELDSNEKLRY
                     KGEIENFNRQIKQDIVLQKDAESEIKSDFFDENLQENDTIAIQEQLDFKEPKEKKPSV
                     FSNIWHKIMNQF"
     gene            3009..4121
                     /gene="ftsZ"
                     /locus_tag="RJ336_001405"
     CDS             3009..4121
                     /gene="ftsZ"
                     /locus_tag="RJ336_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDZ5213839.1"
                     /translation="MSEFLVEEMQHNKGAKIKVIGCGGGGGNMINHMVKMGLNDLDLI
                     AANTDAQAISISLAKTKIQLGEKKTKGLGAGMLPEVGAESARESFEEIKASLSQSDIV
                     FIASGFGGGTGTGATPVIAQAAKEIGALTVSVVTMPFAFEGKQRKKLAESGLLELKKE
                     SDSILVIQNEKLLSIIDKKAGIKDAFRLVDDILARAVKGMVSILLDNGDINVDFADVR
                     TIMSHRGLALMGVGSASGENAIEEALSNAIESPLLDGMDIKGAKGVILHFKTSSNCSL
                     FEISAAANSIQEIVDENAKIIFGSTTDDSMEDRVEVTIIATGFEDKDTVAKKSTEEAQ
                     ASKKNPYLSLKKVSGGYDEEIMAQIETPTFLRRQMD"
     gene            4276..5088
                     /locus_tag="RJ336_001406"
     CDS             4276..5088
                     /locus_tag="RJ336_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body protein"
                     /protein_id="HDZ5213840.1"
                     /translation="MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADF
                     KRIFKETQDELPIENHTRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMT
                     REDAFYLVQTKDGEVRLTKDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNG
                     AVQISVDKNGSIEVDGAQNARLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAI
                     RQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAINKLAAVK"
     gene            5117..5908
                     /gene="flgG"
                     /locus_tag="RJ336_001407"
     CDS             5117..5908
                     /gene="flgG"
                     /locus_tag="RJ336_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HDZ5213841.1"
                     /translation="MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADL
                     MYQVMKYAGTSTSATTLSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNG
                     FFQIQLPDGTIGYTRNGQFTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSV
                     MLPGEQQETQIGQVELVQFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHG
                     FIELSNVQLVEEMTDLITGQRAYEAGSKAITTSDDMLGIVNQLKR"
     gene            complement(5974..7404)
                     /gene="glnA"
                     /locus_tag="RJ336_001408"
     CDS             complement(5974..7404)
                     /gene="glnA"
                     /locus_tag="RJ336_001408"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDZ5213842.1"
                     /translation="MGKFVNNIDDFFKFCKQNEVLFVDFRFTDMIGTWHHITYNLHAI
                     NEETFQTGIPFDGSSIHGWQPIEKSDMILKPDAQSAFLDPFTADPTIIVFCDVYDIYK
                     GQMYEKCPRSIAKKAMEHLKNSGIADTAYFGPENEFFVFDSVKIVDTTHCSKYEVDTE
                     EGEWNDDREFTDSYNTGHRPRNKGGYFPVQPIDSLVDIRSEMVQTLEKVGLKTFVHHH
                     EVAQGQAEIGVNFGTLVEAADNVQIYKYVVKMVAHLNGKTATFMPKPLYGDNGNGMHV
                     HMSLWKDGVNLFYDKDGYSGLSQTAINYIGGILKNARSVAAFTNPSSNSYKRIVPGFE
                     APCILTYSCQNRSASCRVPYGIGKNSARIEIRFPDSTANPYLAFVSLLMAGLDGIKNK
                     TIPVGPMDENLFDLTLDEIREKGIEQLPHTLRGSLEALIRHNSYLKPVMSDIFIDDYQ
                     HLKFETQVWPVEARPTAYEFKTCYSC"
BASE COUNT         2657 a         1015 c         1364 g         2385 t
ORIGIN      
        1 attgtaaaaa tcataaaatt taaagaacaa atattttttg gtaaaaattt tataattaaa
       61 ctccacttaa acacttctac gatacaatat ctagtttaaa tttaatcaag gaatgatatg
      121 cttacttgga tgcaacatca caaaaaatat cttgttgtta ctatatgggt tagtactata
      181 gcttttgttg gcgctggctt tttaggttgg ggtgcttatg attttaatct caatagaagt
      241 tcgagtgttg caaccgtagg aaatgaaaag ataggtttta gcgaatttga tactagatat
      301 agacaaattt taagttatta taatcaaatt agcaatggtg ctttaactcc agaaaatgct
      361 gagcaactag gcattaaaaa tatagcttta agctcccttg ttgaagataa gcttttgtta
      421 aattttgcca aagatttggg tattggcgta aacgagaatg aaattttaca aaaacttgca
      481 aatactagag aatttcaaga tcctacaggg gattttaaca aaacaattta ttatgaactt
      541 ttaaatgcca ataatttaac tccaaaagat tatgaaacac aacttgcaaa tgaagtaatt
      601 accgataaac ttaatcaaat ttttaatatt cctagcaaag atgaagaatt aaaaatgtta
      661 gcttctagtt atttcatgca agatgcttta agtattgcaa aaattgatta tgacaaaaaa
      721 aatattaaga ttaatgaaga ggatttaaaa aagctttgga atgaacataa agaagattat
      781 aaaactaaaa aaatatatga aatttcaact tattttttgt cagttagcaa tgagaaaatt
      841 gacgacaaag aattagaaaa attttataat caagatgaaa ataaactaaa atataaagat
      901 tttgcaggta aagtgatgga ttttcagtct gctaaaaatg aagttgctaa agattacgcc
      961 ttaatacaac taaagaatgt ggctaatgct aaatttttag atttaaaaaa cgggaaagat
     1021 aattttcaaa aagatcaaaa tattagtgaa tctgatgttt attatccaat tgatcttttg
     1081 aataaagcta aaaatggaga tgttttacga ccagcacctt ataataacgg atatatcata
     1141 gttaaactaa ataaagtaga tcctataaga aataaaactt ttgaagaagc tagagaagaa
     1201 gttttaccta tgtatttaag cgaacaagct agaaaaaatt tagaagaaaa agctaaaaat
     1261 agtttagtaa attttaaagg cgatgatata ggctttgtaa gtcgagatag ttctcgcgag
     1321 agtgtaaagc ttagtgataa gatattaaat gattctgaat ttgcttattt tttgatgaat
     1381 gtatttaata ccgatcaaaa tagttcttat gtgatcatta atgacaataa agcaatatta
     1441 tataaaataa ataaacaaaa attagatatg aactccgata aatttgaaca atacaaaact
     1501 atgcttgaac aaaatttgcg aaatttaaaa gcaaatgagc ttaagcaaga acttgttgat
     1561 gaacttaaaa agatatatcc gataaaaatt tattataaag ggaattgatt ttgaatatat
     1621 taggaattga cttaggctca acccagactt gtgccattat tgctcaaaaa gatgaagatg
     1681 gattaaaaat tattggtttt tccaagtcga aaaccaacgg ggttaaaaaa ggtgccatta
     1741 ccaatataga gcttgcttct aaatctattg aagaagctgt tagaagtgct gagatgatga
     1801 gcggagttca ttatgataag gttgtggtgt ctatatcagg tgcttatact aaaagcgttg
     1861 atagcatagg tgttgttaat attccaaatc atgaaatagg cattaaagaa attcatcgtg
     1921 ctgtaagtac agctaagcat actgccaatc taccaagtgg ttatgaaatt atccatgttt
     1981 tgccttataa ttttaaggtt aatgatcttg aacatgttga tgatcctttg ggaatgagtg
     2041 gtaatcgttt ggaagtttca acccatatag tgatttcaca agaatctcat attaaaaatc
     2101 ttaagaaagc agttgaatta gctgatttaa gagtggataa tatagttctt tcaggatatg
     2161 cttcagctat agcttgttta gatgatagcg aaaaggaatt aggtgctgtt ttgattgata
     2221 tgggtggagc gatttgtgat atggttgttc atactggaaa ttcaattaga tataatgatt
     2281 gtttgcaaat tggctcgatt aatattaccc aagatttatc aatggcattg catacacctt
     2341 taaaagaagc agaaaaaatc aagcttaatt atgcagctct ttcacaacag cctaataccc
     2401 ttatacaaat tccttcaatg ggtgatgaaa gaaaggttaa tgaagtttct ttggatatta
     2461 tttcaaacgt aatttatgca agagcggaag aaactttgat gattttggca aaaatcttaa
     2521 gtgataatcg ttatgccaat gctataggcg gtggagttgt tttaacaggt ggaatgacta
     2581 agttagcagg tattgatgag ctagctcctg caacatttga taatcgctca gttagactag
     2641 ctactgcaag aaaagatttg attactggtt ttagtgaaat ttttaatgat cctgaaaata
     2701 cttgtgctat aggactttgt ttatatggag cggggtattt tacgccttat gaacttgatt
     2761 ctaatgaaaa attaagatat aaaggggaaa ttgaaaattt taatcgtcaa attaaacaag
     2821 atattgtttt gcaaaaagat gcagaaagtg aaataaaatc tgattttttt gatgaaaatt
     2881 tgcaagaaaa tgatacaatt gcaatacaag aacaattaga ttttaaagag ccaaaagaaa
     2941 aaaaacctag cgttttttca aatatctggc ataaaattat gaatcaattt taacaaggag
     3001 aaatttttat gagtgaattt ttagtagaag aaatgcaaca taataaaggt gcaaaaatta
     3061 aggttatagg ctgcggtggc ggtggcggta atatgatcaa ccatatggtt aaaatgggat
     3121 taaatgatct tgatttaatt gcagcaaata ctgatgcaca agctatttca atttcattag
     3181 caaaaactaa aattcaactt ggcgagaaaa aaactaaagg tttaggcgct ggtatgcttc
     3241 ctgaggtagg tgcagaaagt gctagagaaa gttttgaaga aataaaagca agtcttagtc
     3301 aaagtgatat tgtatttatt gcttcaggtt ttggtggagg tactggaacg ggtgccactc
     3361 cagttattgc acaagcagct aaagagattg gagctttaac tgtttctgtt gtaactatgc
     3421 cttttgcatt cgaaggaaaa caaagaaaaa aacttgctga aagcggtctc cttgagctta
     3481 aaaaagaaag tgattctatt cttgtaattc aaaatgaaaa attattgagc attattgata
     3541 aaaaagcagg cattaaagat gcttttagat tggttgatga tattttagct cgtgctgtaa
     3601 aaggtatggt gtctatcttg cttgataatg gagatattaa tgttgacttt gcagatgtaa
     3661 gaaccatcat gagtcatcgc ggactcgcac ttatgggcgt tggtagtgct agtggtgaaa
     3721 atgctataga agaggctctt tcaaacgcta tagaatctcc tttgcttgat ggaatggata
     3781 ttaaaggtgc caagggagtt attttacatt ttaaaacaag ttctaattgc tctttgtttg
     3841 aaatttcagc agcagcaaat agtatacaag aaattgttga tgaaaatgct aagattattt
     3901 ttggttctac tacagatgat agcatggaag atagagttga agtgactatt attgcgacag
     3961 ggtttgaaga caaagataca gtagctaaaa aatctaccga agaagctcaa gcttctaaga
     4021 aaaatcctta tttaagtctt aaaaaggtaa gcggtggtta cgatgaagag ataatggcgc
     4081 aaattgaaac accgactttc ttgcgtcgtc aaatggatta aaattgattt taaagcaaga
     4141 ttgagtcaaa tcttgctttt tatagtttaa aattctctcc taataatctt tcaaatattt
     4201 atttttcttt gtttttaaaa gttggaacac tctttgcttt tatagctata aaatcttaat
     4261 tttataggtg aaaatatgca aaatggatat tatcaagcaa ctggcggaat ggtaactcag
     4321 tttaataaac ttgatgtgat tactaataat cttgccaata ttaatacaag tggatacaaa
     4381 agagatgatg tggttattgc agattttaaa aggattttta aagaaactca ggatgagttg
     4441 cctatagaaa atcacacaag agatgcatct cgttttgtaa atactacaat agatggaatc
     4501 ccgcaagttt ctcaagaata tacggatttt agtctaggtt ctttaaaggc cacaaacaat
     4561 cctttggatt tggcaatgac tagagaagat gctttttatt tggttcaaac caaagatgga
     4621 gaagtaagat taaccaaaga tggaaatttt caacttgatg atgagggtta tttggtaaat
     4681 aagcaaggat acaaggtatt aagtagtgat tattttaata atcctcagaa tgctggcata
     4741 cgcattccta atggtgctgt tcaaattagc gttgataaaa acggaagcat tgaggttgat
     4801 ggagctcaaa atgcaagatt atttgtagca caagtagatg atataagagc tttgcaaaaa
     4861 gatggggata atgtctataa aatagatgat ctaacccgca ttagagattt ggaaaactcc
     4921 aatgctattc gccaaggttt ttctcaggga tcaaatgtta atccagttac tgaaatggta
     4981 ggactgattg aagcaaacag aatggtagaa atgtatcaaa aagttatgac agctcatatg
     5041 gatgacttaa atcaagaagc tatcaataag cttgcagctg ttaaataatt taaaataaaa
     5101 taaaaaagga ttaaaaatga tgagatcact tcatactgct gctacgggaa tggtagcgca
     5161 gcaaacacaa attgatgtta cttcaaataa catcgccaat gttaatacag caggttttaa
     5221 gaaaagtcgc gcagaatttg ctgatcttat gtatcaagtt atgaagtatg caggaacttc
     5281 aacttcagct actactcttt ctccttcggg tatagaagtg ggtgtgggtg tgcgtccaac
     5341 agcggtaact aaagttttta ctgaaggaaa tttaaaatca acaagtactg atggtcttga
     5401 tatggctatt gcaggtaatg gtttttttca aatacaactt cctgatggca ctataggata
     5461 tactagaaat gggcaattta caaaagataa tgaaggtaat attgtaaatt cagatggtta
     5521 tagactttta cctgaaatga caatacctga aggcgcaaca gcaattaatg ttgctacaga
     5581 tggaaccgtt tctgtaatgc taccagggga gcaacaagaa actcaaattg gccaagtgga
     5641 gctagttcag tttataaatc cagcgggtct tcattctatg ggtgataatc tttatcttga
     5701 aacaggagca agtggtgcac ctgttgcggg tatagcagga caagatggac ttggaacaat
     5761 aagacatgga tttatagaac ttagtaatgt tcagcttgtt gaagaaatga cagatcttat
     5821 cacaggacaa agggcttatg aagcgggttc taaggcaatt acaacaagtg atgatatgct
     5881 aggaattgta aatcagctta agcgatagtt gatataaaat aaataatttt taattctttt
     5941 ttatttaatg gcgtgttaaa cgccattaaa tttttagcaa gagtagcaag ttttaaattc
     6001 ataagcagtt ggacgagctt ctactggcca aacttgtgtt tcaaatttta aatgctgata
     6061 gtcatcgata aaaatatcgc tcattacagg ttttaaataa gaattatgtc ggattaaagc
     6121 ttctaaactt cctcttagag tatgtggtaa ttgctctatc cctttttcac gtatttcatc
     6181 caaagtaaga tcaaataaat tttcatccat aggacccaca ggaatggttt tatttttgat
     6241 tccatcaaga cctgccatta aaagactaac aaaagctaaa taaggattag cagtgctatc
     6301 agggaagcga atttctatac gagctgaatt tttacctatg ccataaggaa cgcgacaact
     6361 tgctgatctg ttttgacaag aataagttaa aatacaagga gcttcaaaac caggaactat
     6421 tcttttgtaa gaattggaac ttggatttgt aaaagctgcg acacttctag cattttttaa
     6481 aattccacct atataattta tagcagtttg actaagtcca ctgtatccat ctttatcgta
     6541 aaataaattt accccatctt tccataagct catatgaaca tgcataccat tgccattatc
     6601 tccgtataaa ggttttggca taaaagtggc agttttgcca tttaaatgag ctaccatttt
     6661 tacaacatat ttataaattt gaacattgtc agctgcttct acaagcgtgc caaaatttac
     6721 tcctatttca gcttgtcctt gtgcaacttc atgatgatga acaaaagttt taagacctac
     6781 tttttcaaga gtttgaacca tttcagaacg aatatctact aaagaatcaa ttggctgaac
     6841 tggaaaatat ccacctttgt ttcttggcct gtgtccagta ttgtagctat cggtaaattc
     6901 tctatcatca ttccactctc cttcttcggt atcaacttca tacttagaac aatgagtagt
     6961 atcaactatt tttacactat caaaaacaaa gaattcattt tctggtccaa agtaagcagt
     7021 atcagcaatg ccactatttt taaggtgttc cattgctttt tttgctatgc ttcttggaca
     7081 tttttcatac atttgtcctt tgtaaatatc atacacatca caaaatacta tgatagtagg
     7141 atcagctgta aaaggatcta aaaaagcact ttgtgcatca ggttttaaaa tcatatctga
     7201 tttttctata ggttgccatc catggattga gcttccatca aatggaatgc cagtttgaaa
     7261 tgtttcttca ttgattgcat ggagattata ggtaatatga tgccaagttc ctatcatatc
     7321 tgtaaaacga aaatcaacaa aaagcacttc attttgtttg caaaatttga aaaaatcatc
     7381 tatattatta acaaattttc ccatattttt actcctttat g
//
LOCUS       DAPWGO010000075         7415 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.076, whole genome shotgun sequence.
ACCESSION   DAPWGO010000075 DAPWGO010000000
VERSION     DAPWGO010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7415
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.076"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            36..764
                     /locus_tag="RJ336_001409"
     CDS             36..764
                     /locus_tag="RJ336_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213843.1"
                     /translation="MIELKNVNKYYGTHHVLKNINLSVKEGEKLVIIGPSGSGKSTTI
                     RCMNGLEEVSSGEVVVNNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPM
                     KLQKKSKKEAEETAFKYLKVVGLVDKANVYPATLSGGQQQRVAIARSLCTKKPYILFD
                     EPTSALDPETIQEVLDVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEEN
                     IPSEFFSNPKTERARLFLGKILKN"
     gene            786..1565
                     /gene="peb1A"
                     /locus_tag="RJ336_001410"
     CDS             786..1565
                     /gene="peb1A"
                     /locus_tag="RJ336_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adhesin/ABC transporter
                     aspartate/glutamate-binding protein PEB1a"
                     /protein_id="HDZ5213844.1"
                     /translation="MVFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGV
                     KNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSV
                     DAVIATFTITPERKRIYNFSEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTK
                     KAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDKSEILPDS
                     FEPQSYGIVTKKDDPAFAKYVDDFVKEHKNEIDALAKKWGL"
     gene            1567..2319
                     /locus_tag="RJ336_001411"
     CDS             1567..2319
                     /locus_tag="RJ336_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDZ5213845.1"
                     /translation="MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDAF
                     INGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF
                     LFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQ
                     QMRYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAY
                     IFAAVLYFIICYPLAYFAKAYENKLKKAHLTR"
     gene            2330..2989
                     /locus_tag="RJ336_001412"
     CDS             2330..2989
                     /locus_tag="RJ336_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDZ5213846.1"
                     /translation="MENVFNAQNIEFLMQGLFLTLKIALATCIISIVFGTFLAITKNY
                     GDRLSKFLAACYIDIFRNTPLLLWMLAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMA
                     EIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAY
                     LAGLGIAELTYNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTAYI
                     S"
     gene            3097..4026
                     /locus_tag="RJ336_001413"
     CDS             3097..4026
                     /locus_tag="RJ336_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HDZ5213847.1"
                     /translation="MRGYKIFSGSANVEFARQVSKYLSLPLSDAGVKRFSDGEISVQI
                     DESVRGKDVFIIQSTCAPTNDNLMELLILTDALRRSSANSITAIIPYFGYARQDRKAN
                     PRVPITAKLVANLIQAAGIDRVATIDLHAGQIQGFFDIPVDNLYGSIVFNDYIKAKHF
                     KNAIIGSPDIGGVARARSVAKHLGLDIVIVDKRREKANESEVMNIIGDVKDKEVILVD
                     DIIDTAGTIVKAAEALKEKGAKSVMACCTHAVLSGKAYERIASGALDELVVTDTIPLK
                     EQLPNIKVLSVTPVFAEVIRRVYHNESVNSLFI"
     gene            4193..6304
                     /locus_tag="RJ336_001414"
     CDS             4193..6304
                     /locus_tag="RJ336_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HDZ5213848.1"
                     /translation="MTQLSTKILWLFVATLGAICFGYLALQNGESVSAIYLVVAAVCI
                     YMIGYRFYGRFVAYKVLELDKNRATPALIENDGRDFVPTNKAVLFGHHFAAIAGAGPL
                     VGPILAAQMGYLPSMLWILVGGVLAGAVHDFVVLFISTRRKGRSLGEMIKDEMGKFTG
                     GVAMVAIFGIMLIIIAILAMVVVKALAESPWGLFTIAMTIPIAIFMGIYMRFIRPGRV
                     GEASIIGFVLLILAIHYGSVIAADPYWAKIFTLEAPTLAIVMMAYGFIASVLPVWFLL
                     APRDYLSTFLKIGVIVVMAVAIVLVAPDLQMPKANTQYFDGTGPVFAGGVFPFLFITI
                     ACGAISGFHALISSGTTPKMLENETHALAVGYGSMLAESAVAIMALICACILHPGLYF
                     AINSSSALIGTDVVNVAQTISSWGFSITPEEITTLTTNIGEHTILSRTGGAPTFAIGV
                     ALILHELFGGVDLMAFWYHFAILFEALFILTAVDAGTRACRFMVQDILGNVYKPLGDI
                     HNYPAGLLATALSVAGWGYFLYQGAIDPKGGIYTLWPLFGVSNQMLAGMALLLATTIL
                     VKMGKARYTWVTLVPAVFVLVATLYGGIQKIMPYEEGNKVANAVSHVAAVSIQSQKIK
                     DLEFKLNNTKDEKEISTIKKEISIATQNKVGNLLNAILCVFFMIATLLVIISCIGICL
                     GKIKIPLKETKYIKIDEFQKI"
     gene            6285..6482
                     /gene="kcuS"
                     /locus_tag="RJ336_001415"
     CDS             6285..6482
                     /gene="kcuS"
                     /locus_tag="RJ336_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_148936501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KCU-star family selenoprotein"
                     /protein_id="HDZ5213849.1"
                     /translation="MNFKKFKYYYEKAERFFHPLVGLSSYDKYLEHMKQKHPGKIPKT
                     RGEFFKECLDKKYNSGGLNKC"
     gene            complement(6522..6935)
                     /locus_tag="RJ336_001416"
     CDS             complement(6522..6935)
                     /locus_tag="RJ336_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDZ5213850.1"
                     /translation="MRDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAAREL
                     SPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSC
                     INVTSALVTYVSVTRDGKKKPISEELKRIHGFLNA"
     gene            6997..>7415
                     /locus_tag="RJ336_001417"
     CDS             6997..>7415
                     /locus_tag="RJ336_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213851.1"
                     /translation="MNNFKEIAKLVRKYKERNNALYEFLDKEDVGEYFRSLISLSELK
                     QDKTTMLAILRRLIDLKEENLVQEWKKNNFKEDKIIELKHKFYEEVRKFYEKEHQNLI
                     NEIKEKKLLNNFYQSLIQGVHNIGLIMNIFEISWTKE"
BASE COUNT         2431 a          954 c         1411 g         2619 t
ORIGIN      
        1 taattttata tttagttaaa aataaaggaa aaaacttgat tgaattaaaa aatgtaaaca
       61 aatactacgg aactcatcat gttctaaaga atattaatct ttctgttaaa gaaggtgaga
      121 agcttgttat tataggtcca agtggaagtg gaaaaagtac aactatccgt tgcatgaatg
      181 ggcttgaaga agttagttca ggcgaggtcg tagttaacaa tcttgtttta aatcataaaa
      241 ataaaattga aatttgtcga aaatattgtg caatggtttt tcagcatttt aatttatatc
      301 cacatatgac ggttttgcaa aatttgacct tagctccaat gaaacttcaa aaaaaatcta
      361 aaaaagaagc tgaagaaaca gcttttaagt atttaaaagt cgtaggttta gtggataaag
      421 caaatgttta tccagcaacc ctttcaggcg gacaacaaca acgcgttgct atagcaagat
      481 cactttgtac taaaaaaccc tatattttat ttgatgaacc tacttcagcc cttgatccag
      541 aaaccataca agaggtttta gatgtaatga aagaaatttc acatcaaagc aatactacca
      601 tggtggttgt tacacacgaa atgggttttg caaaagaagt agcagatagg attattttta
      661 tggaagatgg tgctattgtg gaagaaaata ttcctagtga atttttctca aatccaaaaa
      721 ctgaaagagc gcgactcttt ttagggaaaa ttcttaaaaa ttaaccaaaa ttgaaaggag
      781 aaaaaatggt ttttagaaaa tctttgttaa agttggcagt ttttgctcta ggtgcttgtg
      841 ttgcatttag caatgctaat gcagcagaag gtaaacttga gtctattaaa tctaaaggac
      901 aattaatagt tggtgttaaa aatgatgttc cgcattatgc tttacttgat caagcaacag
      961 gtgaaattaa aggtttcgaa gtagatgttg ctaaattgct agctaaaagt atattgggtg
     1021 atgataaaaa aataaaacta gttgcagtta atgctaaaac aagaggccct ttgcttgata
     1081 atggtagtgt agatgcagtg atagcaactt ttactattac tccagagaga aaaagaattt
     1141 ataatttctc agagccttat tatcaagatg ctatagggct tttagtctta aaagaaaaaa
     1201 attataaatc tttagctgat atgaaaggtg caaacattgg agtggctcaa gctgcaacta
     1261 caaaaaaagc tataggtgaa gctgctaaaa aaattggtat tgatgttaaa tttagtgaat
     1321 ttcctgatta tccaagtata aaagctgctt tagatgctaa aagagttgat gcgttttctg
     1381 tagacaaatc aatattgtta ggctatgtgg atgataaaag tgaaattttg ccagatagtt
     1441 ttgaaccaca aagttatggt attgtaacca aaaaagatga tccagctttt gcaaaatatg
     1501 ttgatgattt tgtaaaagaa cataaaaatg aaattgatgc tttagcgaaa aaatggggtt
     1561 tataatatga atgaaagtgt aggttttgtt gaacatttaa gacaaattct tacttcttgg
     1621 ggtttatatg atgaaaatag tataagccct tttgcggtat ggaaattttt agatgctttg
     1681 gataataaag atgcttttat taatggtttt atttatactt tagaagtaag cattcttgct
     1741 ttgcttatag ctacaatttt tggaactata ggcggagtta tggctacaag tagatttaaa
     1801 attatcagag cctacactag aatttacgta gagctttttc aaaatgttcc tttggtaata
     1861 caaattttct ttttgtttta tgccttgcct gttttaggta taagacttga tatatttact
     1921 attggtgtat tgggtgttgg agcttatcac ggagcttatg taagcgaggt ggttagaagt
     1981 ggaattttgg ctgtgccaag aggtcagttt gaagcttctg cttctcaagg gtttacttat
     2041 attcaacaaa tgcgttatat tatagtacct caaaccatta gaattatttt accaccgatg
     2101 acaaatcaaa tggtaaattt aatcaaaaat acctctgtat tgcttattgt aggtggagct
     2161 gagttaatgc attctgctga tagctatgca gctgattatg gaaattatgc gccagcttat
     2221 atatttgcag cggttttata ttttataatt tgttatcctt tggcttattt tgcaaaggct
     2281 tatgaaaata aattaaaaaa agcacattta acgagataaa ggattgttaa tggaaaatgt
     2341 ttttaatgca caaaatattg aatttttaat gcaaggttta tttctgacat taaaaatagc
     2401 cttagcaact tgtattattt cgattgtttt tggaactttt ttagctataa ctaaaaatta
     2461 tggggataga ttaagtaaat ttttagcagc ttgctatata gatattttta gaaatactcc
     2521 tttattatta tggatgcttg cagcttgttt tgttctacct gtattttttg gacaatttcc
     2581 tcaagctttt tggggtacta taggattttc actttatacg agttcggtta tggctgaaat
     2641 tattagaggt ggattaaatt ctataccaaa aggtcagttt gaagcagctt attctcaagg
     2701 ttttggtaaa ttttttactc ttttttatat tattttacca caaactttta gaaaaataat
     2761 acctgcttta ttatctcaaa ttgtaaccac tgtaaaggat acagcttatt tagcgggttt
     2821 aggtatagct gaacttactt ataattcaaa aactatattg gcaaaactaa caagttttga
     2881 agaaatttta gcgatgatag gtgttgttgc gggaatttat tttataatat gtttttcact
     2941 ttctatgttg gtaagatatt atgccaaaaa gacagcttac atttcttaaa aaagcttata
     3001 tttttatata agctttttaa atttacagca gtttttaaca ttttttttat taaaatcttt
     3061 tgtattaatt cataatttta ttgattaagg ttttttatgc gaggttataa aattttttca
     3121 ggctcagcta atgtcgaatt tgcaagacaa gtttctaaat atctctccct gcctttaagt
     3181 gatgctggag taaagcggtt tagtgatgga gagattagtg ttcaaattga tgagagtgta
     3241 cgcggaaagg atgtttttat tattcaaagt acttgcgctc ctacaaacga taatttaatg
     3301 gaacttttaa ttcttacaga tgctttgcgt cgctcaagtg caaattcaat tacggctatt
     3361 atcccatatt ttggctatgc gagacaagat agaaaagcaa atcctagagt gccaattact
     3421 gctaaacttg tggctaattt gattcaagca gctgggattg atcgcgtagc tacgatagat
     3481 ttgcatgcag gacaaattca gggttttttt gatattccag tagataatct ttatggaagt
     3541 atagttttta atgattacat taaagccaaa cattttaaaa atgctattat aggaagtcca
     3601 gatatagggg gtgttgcaag agctaggagt gttgcaaagc atttaggact tgatatagtt
     3661 atagttgata agcgtcgtga aaaagccaat gaaagtgaag taatgaatat cattggagat
     3721 gtaaaagata aagaagttat cttagtggat gatattattg atactgctgg cactatagtt
     3781 aaagccgcgg aagctttaaa agaaaaaggt gcaaaatctg ttatggcttg ctgtactcat
     3841 gcagttttaa gtggaaaagc ctatgagaga atagcaagtg gagctttaga tgagcttgtg
     3901 gtaacagata ctataccttt aaaagagcaa ttaccaaata ttaaagtatt aagcgttaca
     3961 cctgtttttg ctgaagtaat acgtcgtgtt tatcataacg aaagtgtaaa ttctctcttt
     4021 atttagatta aaaaagctta aagattattt ttaagctttt catttttatg ctacttaaag
     4081 aaacaaaaaa catatatttt tttaaaaatg tgaaaaaact aaacatcttt ctatacaatt
     4141 taatctataa atctgctatt ctttgaaaat attttatttt cttaggagaa atatgactca
     4201 gttaagtact aaaattttat ggttgtttgt tgcaacttta ggcgctattt gttttggtta
     4261 tttagcttta caaaatggcg aaagtgtatc agcgatttat ttggtggttg ctgctgtatg
     4321 tatttatatg ataggatata gattttatgg gcgttttgta gcttataagg ttttagaact
     4381 tgataaaaat cgtgcaacac cagcacttat agaaaatgat gggcgtgatt ttgtgcctac
     4441 aaataaagct gtattatttg gacatcattt tgctgctatt gcaggagcag gtccattagt
     4501 aggacctatc ttggccgctc aaatggggta tttgccttct atgctttgga ttttagtagg
     4561 aggagtttta gcgggtgctg tgcatgattt tgttgttctt tttatatcta ctcgtagaaa
     4621 aggtagaagt cttggcgaga tgattaagga tgagatgggt aaatttacag gtggagttgc
     4681 tatggtggcg atttttggca ttatgcttat tattattgcc attttagcta tggtggttgt
     4741 aaaagcttta gcagaatctc catggggttt atttactatc gcaatgacta ttcctatagc
     4801 aatatttatg ggaatttata tgcgttttat ccgtccaggt agagtagggg aggcttctat
     4861 aataggtttt gtgcttttaa ttttggctat tcattatggt agtgttatag ctgctgatcc
     4921 ttattgggct aaaatattta ctttagaagc tccaactttg gcaattgtta tgatggctta
     4981 tggttttatt gcttctgttt tacctgtgtg gtttttactt gctccaagag attatctttc
     5041 aacttttttg aaaatcggtg ttattgtggt aatggctgta gctattgttt tggttgctcc
     5101 tgatttacaa atgccaaaag caaatactca gtattttgat ggaacaggtc cagtatttgc
     5161 aggtggagtg tttccatttt tatttattac cattgcttgt ggtgcgatca gcggttttca
     5221 tgctttgatt tctagtggaa ctactcctaa aatgcttgaa aacgaaactc atgctttggc
     5281 tgttggatat ggctctatgc ttgctgaaag cgctgtggcg attatggctt taatttgtgc
     5341 ttgtatttta catccaggtc tttattttgc tataaactca agctctgctt tgataggaac
     5401 agatgttgta aatgtagcac aaaccatttc aagttgggga tttagtatta ctcctgaaga
     5461 aattactact ttaaccacaa atataggaga gcatactata ctttcaagaa caggtggagc
     5521 tccaactttt gctataggtg tagctttgat cttgcatgaa ctttttggcg gcgtggattt
     5581 gatggctttt tggtatcatt ttgctatatt gtttgaagct ttatttattt taacagcggt
     5641 ggatgctggg acaagggctt gtcgttttat ggtgcaagat atattgggta atgtttataa
     5701 acctttagga gatattcata attatccagc tggacttttg gctacggctt taagtgttgc
     5761 aggttgggga tattttcttt atcaaggtgc cattgatcct aagggaggaa tttatacgct
     5821 ttggcctctt tttggcgtga gtaatcaaat gcttgcgggt atggctttgc ttcttgctac
     5881 aactatactt gtaaaaatgg gcaaggcaag atatacttgg gttactttag tacctgcggt
     5941 atttgtctta gtggcaactc tgtatggagg aattcaaaaa attatgcctt atgaagaagg
     6001 caataaagta gcaaatgcgg taagtcatgt agccgccgtt agcatacaaa gtcaaaaaat
     6061 taaagattta gaatttaaat taaataatac taaagatgaa aaagaaattt ctacaattaa
     6121 aaaagaaatt tcaatagcca ctcaaaataa agttggaaat ttacttaatg caattctttg
     6181 tgtgttcttt atgatagcta ccttgcttgt tataatttct tgtataggaa tttgcttagg
     6241 taaaattaaa attcctctta aagaaactaa gtatattaag attgatgaat ttcaaaaaat
     6301 ttaagtatta ttatgaaaaa gccgaaaggt tttttcatcc cttggtggga ctttctagtt
     6361 atgataagta tttagaacac atgaaacaaa aacatccagg aaaaattcca aaaaccagag
     6421 gggaattttt caaagaatgt ctagataaaa aatataatag cggcggttta aataaatgct
     6481 gataagctta aaggataaag ttttatcata caaaataagc tttaagcatt taaaaagcca
     6541 tgaattcttt taagttcttc actaataggc tttttctttc catctcttgt aacacttaca
     6601 taagttacta aagccgaagt tacattaatg caagaagtac aaccttgaga atccactctt
     6661 tgagctgtga cttctacttc aacgctgatt gaagtgttgc ccacatttac aactttagag
     6721 taacaagaaa ttatatcgcc tataaaaaca ggttctttaa aaactacttt atccatagag
     6781 atggttacaa cgcgttcagg agaaagttct cttgctgcga tagctcctgc taaatcgatt
     6841 tgtgaaagta tccatccgcc aaaaatattt cctgctggat ttgtgtcact tggcatagct
     6901 acaattttta attttggttc tcccatatct ctcattttta ctccttattt taaaaaatga
     6961 attataatta aaaaagttaa aaaggagaat aaaagtatga ataattttaa agaaatagct
     7021 aaattggtta gaaaatacaa agaaagaaat aatgcattat atgagttttt agacaaagaa
     7081 gatgtgggcg agtattttag atctttgatt tctttaagtg agttaaaaca agataaaaca
     7141 actatgctag ccatacttag gcgtttgatt gatttaaaag aagaaaattt agttcaagag
     7201 tggaaaaaaa acaactttaa ggaagataag attatagagt taaaacataa gttctatgaa
     7261 gaggttagaa agttttatga aaaagaacat caaaatttaa ttaatgaaat aaaagagaaa
     7321 aagcttttaa ataattttta tcagtcctta atacaaggag tgcataatat aggtttaatt
     7381 atgaatattt ttgaaatttc ttggactaaa gaaat
//
LOCUS       DAPWGO010000076         6994 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.077, whole genome shotgun sequence.
ACCESSION   DAPWGO010000076 DAPWGO010000000
VERSION     DAPWGO010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6994)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6994)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6994
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.077"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            96..1931
                     /locus_tag="RJ336_001418"
     CDS             96..1931
                     /locus_tag="RJ336_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDZ5213852.1"
                     /translation="MGEFSRRDFIKTACISVGALAASSSGVYALDDSSKMDKDTNLPS
                     CDVLVIGSGGAGLRAAAAVRKENPKLSVVVATKMMPSRNATCMAEGGINGVTDFSNGD
                     SYKLHAYDTIKGGAYLVDQDAALKFCELAGKAIFNMDFIGTLFSRNEQGGVAQRLMGG
                     ASKKRCNYSADKTGHILMHSCLDDAISSGVKFLMDHELLDIGVMDGKCEGVVLRDIQS
                     GGIYPVLCKALVIATGGYTRIFYNRTSTPFIATGDGVAAALRAGLGFEDPEMIQFHPT
                     GVANGGTLITEAARGEGGYLLNNRGERFMKNYHEKMELAPRDVVARAIETEIREGRGY
                     GEGLGAYVLCDVRHLGKEKILKDLPKIRHTAMLFENIDLVDTPVPIRPTAHYSMGGIE
                     VAKFEDMSTKIAGIYVGGEASCISIHGANRLGGNSLADAVVTGHLAGIGATNYAKDAS
                     FGKGAKTHELAQKWQARFKEITNNGGNGQEMYELREELGSQNWDNMGIFRTQEKLDLL
                     AKNLEDIQARYEKIRIPNPNEVMNTAFTDYVELGNLILLSRCACLAARNRLESRGAHT
                     REDYPKRDDKNFLKHSIVNLENDELKLSYKDVVVTEFSLDGRRVQ"
     gene            1928..2893
                     /locus_tag="RJ336_001419"
     CDS             1928..2893
                     /locus_tag="RJ336_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HDZ5213853.1"
                     /translation="MKIIIDRFNGKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDIT
                     LNFTASCQSAICGACAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDL
                     IVDWEPSIENLRKIRPAMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNK
                     LEADSSDYMQPFVFTHAWRAAADSRGKDPMLHVKPSVMNGLWLCVHCQECADRCPKGI
                     SSVSDIANLRVMAIKKGLNEGLGPDHAEAFYKDLVEGSGRLNEIYLALRSEGVIGSMG
                     KTDIAFKLMRAGKMNPMHVFGEDEIEGHKDLVKMIKAAQEAAVKE"
     gene            2897..3754
                     /locus_tag="RJ336_001420"
     CDS             2897..3754
                     /locus_tag="RJ336_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoB--CoM heterodisulfide reductase iron-sulfur
                     subunit B family protein"
                     /protein_id="HDZ5213854.1"
                     /translation="MQKEYAFFPGCVLSQAAKESKISLEAIAPILGWKLNEIKGWSCC
                     GASQAQCVDPIATLVANARNIALAEEMKMPMLTTCSTCMLTLTKAKNTLDKGAKERIN
                     TFLAQGGMKYQGSTPITSLLWELYEDLDNLKSKVKKPLSNLKVALFYGCHSLRPEDAF
                     GKKESSTNPKSFESVVEVLGAKIVPFEKRLDCCGFHASYPAEKSVKKMSSQIVNNASE
                     NQADCVVTPCPLCQMQLDIYQERFQDYTSSKARLPMIHLSQLVGLALGLSKEMVGLDY
                     NIIDASKIA"
     gene            complement(3778..4446)
                     /gene="tenA"
                     /locus_tag="RJ336_001421"
     CDS             complement(3778..4446)
                     /gene="tenA"
                     /locus_tag="RJ336_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HDZ5213855.1"
                     /translation="MMLFSNLIKENQKIWNAYLHHDFVKKLEDKSLKQENFLFYLKQD
                     YIYLLNYAKCYARLALNSNTAKELRFAMKFQNYIVEGEMELHRAILSLGINADELNIK
                     DESLVNIAYSRYMLSVGENGDFLDMLVALSACAIGYAKIGAEIINRLKNENLKDHPYK
                     EWILTYGSENFQNEAKEFEDFVNSYTSSVSAQKFQKLSEIFHTATRLEVAFWEHSLRM
                     ELNL"
     gene            4556..4789
                     /gene="acpP"
                     /locus_tag="RJ336_001422"
     CDS             4556..4789
                     /gene="acpP"
                     /locus_tag="RJ336_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDZ5213856.1"
                     /translation="MATFDDVKAVVVEQLSIDADAVKMESKIIEDLGADSLDVVELIM
                     ALEEKFEVEIPDSDAEKLIKIEDVVNYIDNLKK"
     gene            4815..6029
                     /locus_tag="RJ336_001423"
     CDS             4815..6029
                     /locus_tag="RJ336_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HDZ5213857.1"
                     /translation="MKRVVVTGIGMINALGLDKESSFKAICNGESGVNKITLFDATDF
                     PVQIAAEVKNFDPLEVVDGKEVKKIDRFIQLGIKAAREAMQDAGFSEELDKEEFGIVS
                     AAGIGGLPNIEKNSIICSERGPRKISPFFIPSALVNMLGGLISIEHGLKGPNISCVTA
                     CAAGTHAIGEAYKSIALGNAKKMLVIGAEAAICPVGIGGFASMKALSTRNEDPQHASR
                     PFDKERDGFVMGEGAGALVFEEYEEAKKRGATIYAELIGFGESADAHHITSPTLDGPL
                     RAMKKALNMAGNPKVDYINAHGTSTPVNDKNETAAIKELFGNNIPLISSTKGQTGHCL
                     GAAGAIEAVISVMALRDGVVPPTINQLVKDDECDLDYVPNISRKVDLKVVMSNSFGFG
                     GTNGCVVFKKVD"
     gene            6031..6969
                     /locus_tag="RJ336_001424"
     CDS             6031..6969
                     /locus_tag="RJ336_001424"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HDZ5213858.1"
                     /translation="MASYLDFEKNIQQIDEDIINAQIKGDTEAVSILKKNLEKEISKT
                     YKNLSDFQRLQLARHPDRPYALDYIELILNDAHEIHGDRAFRDDPAIVCFMGYLGEKK
                     IIVIGEQKGRGTKDKIARNFGMPHPEGYRKALRVARLAEKFQIPILFLIDTPGAYPGI
                     GAEERGQSEAIARNLYELSDLKIPTIAIVIGEGGSGGALAIGVADRLAMMKNSVFSVI
                     SPEGCAAILWNDPAKSEAATKAMKVTADDLKSQGLIDDVIDEPTNGAHRNKEAAAVAI
                     ADYVKKSLNELENIDVRELSANRMQKILKLGAYQEA"
BASE COUNT         2337 a          939 c         1484 g         2234 t
ORIGIN      
        1 gaaaggagag tttgtttttg gatttttggc atgcggttat gtaagattga cttacattaa
       61 aaattattat taatttttta aataaggaga atgatatggg tgaattttct agaagagatt
      121 ttataaaaac agcctgtatt agtgtaggag ctttagctgc aagttcaagt ggagtttatg
      181 ccttagatga ttcatctaag atggataaag atacaaattt accttcttgt gatgttttgg
      241 taattggatc aggtggagca ggtttgcgtg ctgcagccgc agtgagaaaa gaaaatccaa
      301 aattaagcgt tgtagtagct acaaagatga tgccatcgcg taacgcaact tgtatggcag
      361 agggtggaat taatggagtt actgattttt ctaatggaga ttcctataaa ttacatgctt
      421 atgatactat caaaggcgga gcttatttgg tagatcaaga cgcggcttta aaattttgtg
      481 aattagctgg aaaggctatt tttaatatgg attttatagg aaccttgttt tcaagaaatg
      541 agcaaggtgg agtagctcag cgtttaatgg gaggagcttc taagaaacgc tgtaattatt
      601 ctgcagataa aacaggtcat attttaatgc attcttgttt agatgatgct attagtagtg
      661 gtgtgaaatt tttaatggat catgaacttt tggatatagg tgttatggat ggaaaatgcg
      721 agggtgtcgt tttaagagat atacaaagcg gtggaattta tcctgtatta tgcaaagctt
      781 tggtgattgc tacaggggga tacacaagga tattttataa tagaacttca actcctttta
      841 ttgccacagg agatggtgtg gcagctgctc ttagagcagg acttggtttt gaagatcctg
      901 agatgataca atttcaccca acaggagttg caaatggtgg aactcttatt acagaagcgg
      961 cgcgcggtga agggggatat cttttaaata atcgtggtga gcgttttatg aaaaattacc
     1021 atgaaaaaat ggagcttgcc ccgcgagatg tagttgcgcg tgctatagaa acagaaattc
     1081 gcgaaggtag aggttatggc gagggacttg gagcttatgt tttgtgcgat gtacgccact
     1141 taggaaaaga aaaaatttta aaagatttac caaaaattcg tcacactgca atgctttttg
     1201 aaaatattga tttagtggat actcctgtac ctatccgtcc aacggcacat tattctatgg
     1261 gtggaattga agtggctaaa tttgaagata tgagtactaa aattgctgga atttatgtag
     1321 gtggagaagc ttcttgtatt tctatacatg gagccaatag actaggggga aattctttag
     1381 ccgatgcagt tgtaactggg catttagcag gcattggtgc gacaaattat gccaaagatg
     1441 caagttttgg aaaaggggca aaaactcatg aacttgctca aaaatggcag gctagattta
     1501 aagaaattac aaataatggc ggaaatggtc aagaaatgta tgaattgcga gaagagctag
     1561 gaagtcaaaa ttgggataat atggggattt ttagaactca agaaaaactc gatcttctag
     1621 caaaaaattt agaagatata caagcaagat atgaaaaaat tcgtattcca aatcctaatg
     1681 aagtgatgaa tactgctttt acagattatg tagagcttgg taatttgatt ttactttctc
     1741 gctgtgcttg tttagcagct agaaatagac ttgaaagtcg tggggctcat actagagaag
     1801 attatccaaa gcgagatgat aaaaatttct taaaacatag cattgtaaat ttagaaaatg
     1861 atgaattaaa acttagttat aaagatgtcg tggtaactga gttttcactt gatggaagga
     1921 gagtacaatg aaaatcatca tagatcgttt taatggcaag gaaaaatatg aacaaagtta
     1981 tgatattgat gataaggata tacaaggaaa aactctgctc tctcttttgc tttttattaa
     2041 aaaaacaaaa gatattactt taaattttac cgcctcttgt caatctgcga tttgtggggc
     2101 ttgtgcagtt cgtgtgaatg ggcattctta tcttgcttgt gatactaaaa tgcaagattt
     2161 gttaaaagaa tatgataatc cttcaagtat acgcatttct ccgcttggaa attttagagt
     2221 aatttctgat ttaattgtgg attgggagcc ttctatagaa aatttaagaa aaattcgtcc
     2281 tgccatggtg gcaaaaaatg aattttcagc ggaaaagggc tgtaaacaaa gtcaagaaga
     2341 atttgatcgt attagcaagc aatgggattg tattttatgt ggtagctgtg cttcagagtg
     2401 taataaatta gaagcagata gtagcgatta tatgcaacct tttgttttta ctcatgcttg
     2461 gcgtgcagcg gcagactctc gaggtaagga tcctatgttg catgtaaaac ccagcgtaat
     2521 gaatggactt tggctttgtg ttcattgtca agagtgcgct gatcgttgtc caaagggtat
     2581 aagttcagta agtgatatag caaatttaag agtgatggcg attaaaaaag gtttaaatga
     2641 aggcttaggg cctgatcatg ctgaagcttt ttataaagat ttagttgaag gttcaggacg
     2701 cttgaatgaa atttatcttg ctttgcgttc tgagggtgtt ataggttcta tgggtaaaac
     2761 agatatagct tttaaactta tgcgtgcagg aaaaatgaat cctatgcatg tttttggcga
     2821 ggatgaaata gaaggacata aagatttggt taaaatgata aaggcggcac aagaagctgc
     2881 tgttaaggag taaaatatgc aaaaagaata cgcttttttt ccaggttgtg ttttatctca
     2941 agctgcaaaa gaatctaaaa tttcacttga agctattgca cctattttgg gttggaagtt
     3001 gaatgaaatt aaggggtgga gttgttgtgg ggcttctcaa gcgcagtgtg ttgatcctat
     3061 tgcgactttg gtagctaatg caagaaatat tgctttagca gaagagatga aaatgccaat
     3121 gcttacaact tgtagtactt gtatgctaac tttaactaaa gcaaaaaata ctcttgataa
     3181 gggtgcaaaa gaacgcatca atactttttt agcacaaggt ggaatgaaat atcaaggttc
     3241 aacgcctatt acaagtcttt tgtgggagct ttatgaggat ttggataatt taaaaagcaa
     3301 ggtgaaaaag ccgctttcaa atttaaaagt agctttattt tatggttgcc atagtttaag
     3361 acctgaagat gctttcggta aaaaagaaag ttcaaccaat ccaaaaagtt ttgaaagtgt
     3421 agtagaagtt ttaggggcta aaatagttcc ttttgaaaaa cgccttgatt gttgtggttt
     3481 tcatgcttct tatcctgcag aaaaatctgt gaaaaaaatg tctagtcaaa ttgtcaataa
     3541 tgcaagtgaa aatcaagctg attgtgttgt aacaccttgt ccactttgtc aaatgcagct
     3601 tgatatctat caagaaagat ttcaagatta tactagttct aaagcaagat tgccgatgat
     3661 tcatttatca caattagtag gacttgcatt aggactttct aaagaaatgg ttggtttaga
     3721 ttataatatt attgatgcaa gtaaaattgc ataaaaacat gggcaaaaag cccatgttta
     3781 aagatttaat tccattctta aagaatgctc ccaaaaagcc acttccaagc gtgttgcagt
     3841 atgaaaaatt tcgctgagtt tttggaattt ttgtgcacta acacttgaag tataagaatt
     3901 aacaaaatct tcaaattctt tagcttcatt ttgaaaattt tcacttccat aggtcaaaat
     3961 ccattccttg taaggatgat cttttaaatt ttcatttttt aaacgattta taatttcagc
     4021 acctattttt gcatagccta tagcgcaagc actaagagca actaacatat ctaaaaaatc
     4081 tccattttca cctacgctta acatataacg cgaataggct atattgacta aactttcatc
     4141 ttttatattg agttcatctg cattaatgcc aagagataaa attgcacgat gaagctccat
     4201 ttctccttca actatataat tttgaaattt catagcaaaa cgaagttctt ttgcggtatt
     4261 tgagttaagt gctaatcttg cataacattt tgcgtaatta agcaaataaa tataatcttg
     4321 cttgagataa aaaagaaaat tttcttgctt taggctttta tcttccaatt ttttaacaaa
     4381 atcatgatgt agataagcat tccaaatttt ttgattttct ttgattaaat tagagaaaag
     4441 catcattttt cctttatgtt ttaatatttt attttcaagt ataatgaaaa actataaata
     4501 ttttaagctt tttatagtaa aatacgcttt attttaattt tttgaaggag agcaaatggc
     4561 aacatttgat gatgtaaaag cagtagtagt agagcaatta agtattgatg cagatgcagt
     4621 taaaatggaa tcaaaaatta ttgaagattt aggtgctgat tctttagatg ttgtagagct
     4681 tattatggct ttagaagaaa aatttgaagt agaaattcca gatagtgatg ctgaaaaatt
     4741 aattaaaatt gaagatgttg taaattatat tgacaatcta aaaaaataat ttttttcttg
     4801 caaggagctt attcttgaaa agagttgtag ttacaggtat tggcatgatc aatgcccttg
     4861 gtttagataa agaaagttca tttaaagcaa tttgcaatgg agaaagcgga gtaaataaaa
     4921 ttactctttt tgatgccaca gactttcctg ttcaaattgc agctgaagtt aaaaattttg
     4981 atccattaga ggttgttgat ggcaaagaag taaaaaaaat tgaccgtttc atacaacttg
     5041 gaattaaagc agcaagagaa gcaatgcagg atgctggatt tagcgaagaa ttagacaaag
     5101 aagaatttgg cattgtttcg gctgctggta tcggaggttt gcctaacata gaaaaaaatt
     5161 ccattatttg ttccgagcga ggtccgcgta aaatttcccc ttttttcata ccttcagcac
     5221 ttgtaaatat gttaggaggt ttgatttcta tagagcatgg acttaaaggg ccaaatattt
     5281 cttgtgttac agcttgtgca gcaggaactc atgctatagg agaagcttat aaaagtatag
     5341 ctttgggaaa tgctaaaaag atgttagtca taggtgcaga agctgcgatt tgtcctgtgg
     5401 gtataggtgg ttttgcttca atgaaagctt tatcaactag aaatgaagat ccacagcatg
     5461 cttcaagacc atttgacaaa gaaagagatg gttttgtcat gggagaaggt gctggagctt
     5521 tagtttttga ggaatatgaa gaggctaaaa aacgcggtgc tacaatttat gctgaattaa
     5581 ttggatttgg agaaagtgca gatgcacatc atattacttc accaacttta gatgggcctt
     5641 taagagctat gaaaaaagct ttaaatatgg cagggaatcc aaaggtagat tatatcaatg
     5701 cacatggaac ttcaacccct gtaaatgaca aaaatgaaac agcagcaatt aaagagcttt
     5761 ttggcaataa tatcccgctt ataagttcca ccaaaggaca aacaggtcat tgcttgggtg
     5821 ccgcaggtgc aattgaagca gttattagtg ttatggcctt aagagatggg gtagttccac
     5881 ctacaatcaa tcagctcgta aaagatgatg aatgtgatct tgattatgtt ccaaatatat
     5941 caagaaaagt agatttaaaa gtggtgatga gtaattcttt tggttttggt ggcacaaatg
     6001 gctgtgttgt atttaaaaaa gtagattaat atggcttctt atttagattt tgaaaaaaat
     6061 attcagcaaa ttgatgagga tattatcaat gctcagatta aaggagatac tgaagctgta
     6121 tcgattttaa agaaaaatct tgaaaaagaa atttctaaaa cttataagaa tttaagtgat
     6181 tttcaacgtt tgcaattagc gcgtcatcca gatcgccctt atgctcttga ctatattgaa
     6241 cttattttaa atgacgctca cgaaatacat ggtgatcgtg cctttagaga tgatcctgct
     6301 attgtttgtt ttatgggtta tttaggagag aaaaaaataa ttgtaattgg tgagcaaaaa
     6361 ggacgtggaa caaaagataa aatcgctaga aattttggga tgccacatcc tgaaggatat
     6421 cgtaaagcct taagagtagc aagacttgca gagaaatttc aaattcctat tttatttttg
     6481 atagatactc caggtgctta tcctggaata ggtgctgaag aaagagggca aagtgaagct
     6541 atcgctagaa atttatatga attaagtgat ttgaaaatac cgaccattgc tatagttatc
     6601 ggagaaggcg gtagtggcgg ggcgttagct ataggggttg cagatagact tgcaatgatg
     6661 aaaaattctg ttttttcagt aatttctcct gaaggttgtg ctgcaatact ttggaatgat
     6721 cctgcaaaaa gtgaagctgc aaccaaggct atgaaggtaa cggctgatga tttaaaatct
     6781 caaggtttaa ttgatgatgt tatagatgag cctacaaatg gtgcacatcg caataaagaa
     6841 gctgcagcag tagctattgc tgattatgta aaaaaatctc taaatgaact tgaaaatatt
     6901 gacgtacgag aactttctgc aaatcgtatg cagaaaattt taaagcttgg agcctatcaa
     6961 gaggcttagg cttttacttc gcttttttaa ataa
//
LOCUS       DAPWGO010000077         6837 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.078, whole genome shotgun sequence.
ACCESSION   DAPWGO010000077 DAPWGO010000000
VERSION     DAPWGO010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6837
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.078"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            92..376
                     /locus_tag="RJ336_001425"
     CDS             92..376
                     /locus_tag="RJ336_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDZ5213859.1"
                     /translation="MAVKITDICIACGSCIDECPVSAIVDDVNNPEGEDRYYVYANKC
                     VECVGHNDQPACASACPTDGCIVWSAVESGQPSRDNIGADMRSGDTPVFA"
     gene            489..902
                     /gene="ndk"
                     /locus_tag="RJ336_001426"
     CDS             489..902
                     /gene="ndk"
                     /locus_tag="RJ336_001426"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDZ5213860.1"
                     /translation="MEKTLSIIKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQ
                     AENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIR
                     ADFAESIDANAVHGSDSLENAKIEIDFFFKPNEIC"
     gene            903..1256
                     /locus_tag="RJ336_001427"
     CDS             903..1256
                     /locus_tag="RJ336_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213861.1"
                     /translation="MKIPFSKINTKEYPFKLNLENMIFEGNLVKINSKLVKINAIMQG
                     FIYRPCDSCGTELELEIKENLELFASDGIFKDEANELSNTIEFFDGHIDLIEVAISEL
                     EAYLSDYFYCINCNN"
     gene            1280..1426
                     /gene="rpmF"
                     /locus_tag="RJ336_001428"
     CDS             1280..1426
                     /gene="rpmF"
                     /locus_tag="RJ336_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDZ5213862.1"
                     /translation="MAVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPT
                     TKEY"
     gene            1432..2418
                     /gene="plsX"
                     /locus_tag="RJ336_001429"
     CDS             1432..2418
                     /gene="plsX"
                     /locus_tag="RJ336_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDZ5213863.1"
                     /translation="MINIAIDAMGGDFGEKPIIEGVLKALEAKPFNAILVGNSKILKP
                     LIPKKLEQYIQYEEASEIFSMNENATDALKNKETTIYKAINLLKEKKVDAVVSAGHSG
                     ASMSLATLRLGRLKGISRPAIATLMPNIINKTLLLDVGANTDCKAENLFQFAIMGEVY
                     ARAIMQIQKPRLALLSNGEEECKGNELTKESHQLMKKIPNFIGNAEGRDIFNGEIDVL
                     VCDGFDGNVILKACEGVATAIFQLLKNEVKQSFISKIGALLMKPSFKKLKKHTDWQEY
                     GGAPLLGVNGCVIISHGKSDSRAIKNAIFQAINFSQSHINELIENELGKYNA"
     gene            2411..3385
                     /locus_tag="RJ336_001430"
     CDS             2411..3385
                     /locus_tag="RJ336_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDZ5213864.1"
                     /translation="MLKASLKSIASYIPEKILSNADLEKMVDTTDEWITRRTGIKERR
                     IASENENTSDLGTKAALKAIKRANLKPEDIDAILVATLSPDYFTMPSTACKIASNLGL
                     VNISAFDISAACSGFIYLLEQAKALVESGLKKNVLIIGAEKTSSIMDYNDRSICILFG
                     DGAGAGVVSLDNENHILDVHTASNGNYGDLLMTQRSQKSNLCQTLSMQMKGNEVFKIA
                     VNTLSNDVVEILAKNNILAQEIDLFIPHQANLRIIKAVQEKLNLSDEKCVITVQKYGN
                     TSAASIPMAMNDAYEEGRLKKGDLILLDAFGGGFTWGSALLKFGGENF"
     gene            complement(3382..3732)
                     /locus_tag="RJ336_001431"
     CDS             complement(3382..3732)
                     /locus_tag="RJ336_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDZ5213865.1"
                     /translation="MIKRFDECDRMSQIIVFDKYFKTAGQVAFEPSGDIKKQTKEALA
                     ELDTLFEKIGACKGDLIQIQIWLANMQDFDAMNEIYDAWIKNYPKPIRACVGSALAEG
                     YLVEIQAFGKLREN"
     gene            complement(3729..4805)
                     /gene="serC"
                     /locus_tag="RJ336_001432"
     CDS             complement(3729..4805)
                     /gene="serC"
                     /locus_tag="RJ336_001432"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HDZ5213866.1"
                     /translation="MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKV
                     FEEVHFGAQEKAKKLYGLNDDYEVLFLQGGASLQFAMIPMNLSLNGVCEYANTGVWTK
                     KAIKEAQILGVNVKTVASSEESNFNHIPRVEFSDNADYAYICSNNTIYGTQYQNYPKT
                     KAPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPS
                     MLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGELDKVHEKNSQKAAMLYECIDL
                     SNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASI
                     YNALNLDQVKTLCEFMKEFQGKYA"
     gene            complement(4815..5978)
                     /locus_tag="RJ336_001433"
     CDS             complement(4815..5978)
                     /locus_tag="RJ336_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDZ5213867.1"
                     /translation="MTPTELNLKAKALLETHFEDIVLSGEISKITLHGSGHWYFDLKD
                     ERSSIACAMFKGANLKVGFKPAVGDFLELCGSVSLYPESGRYQFIATSIKKAGFGDLE
                     AQFLALKERLQKEGLFDPLFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAK
                     IYIFDALTQGNNAPFSLIQALKKADDMDLDVLIIARGGGSREDLFCFNDENLAREIFK
                     AKTPIISAIGHEIDYVISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLW
                     NHKIQNYENLLLNLSKFFKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDK
                     LQNAYLQHENFFNKSKKFICIRKNGKIANLEDLKSDDIVILSSQTSQKEAKIL"
     gene            complement(5975..6682)
                     /gene="ubiE"
                     /locus_tag="RJ336_001434"
     CDS             complement(5975..6682)
                     /gene="ubiE"
                     /locus_tag="RJ336_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDZ5213868.1"
                     /translation="MQKQEKIIEMFNQIAPTYDKANRILSFGADVVWRKKACQRVMSL
                     YLKKDLKIADIACGTGDMIEIWQESALKMEKNILNIKGIDPSSGMLNVAKEKFPNVEF
                     IEAGAQNLPLESQSLDILSISYGIRNVIERQKALSEFARVLQKDGILVVLEFTKREKG
                     GFIAACRDFYLKNILPSIGGIISKNKSAYEYLPNSIEGFLSKEEFILELKNAGFEMLD
                     YKSFSFGVSSMFIAKKL"
BASE COUNT         2384 a         1108 c         1002 g         2343 t
ORIGIN      
        1 aaataatgta aatttttgat tatcaaaatt tacattattt aagaatttta tgctaaaatc
       61 ttttaaatct taatattaaa aaggagaaaa aatggctgta aaaattacag atatatgcat
      121 tgcttgtggt tcttgtattg atgagtgtcc agtgagtgct atcgttgatg atgttaacaa
      181 tccagaaggc gaagatagat attatgttta tgcaaacaaa tgcgttgaat gcgtaggaca
      241 taatgatcaa cccgcttgtg ctagtgcttg cccaacagat ggatgtatag tttggagtgc
      301 tgtagaatca ggacaaccaa gtcgtgataa tattggcgct gatatgagaa gtggggacac
      361 tccagttttt gcataatttt aaaaaattaa aaagctagag attcctagct ttttctttta
      421 atttaacttt ctttaaacaa attcaagtat aattttaagc tttattaaaa taaggagtta
      481 ttacaaagat ggaaaaaact ttatctataa ttaaacctga tgctgttaaa aaaggtgtta
      541 taggaaaaat tttagatcgt tttgaaagca atggattaag aatcgctgca atgaaaaaag
      601 ttcaacttag taaagaacaa gctgaaaatt tttatgctgt tcataaagaa agaccttttt
      661 ttaaagactt ggttgaattt atgattagcg gtcctgttgt tgtttctgta ctagaaggag
      721 aaggtgctgt attaaaaaat agagatttaa tgggagcgac aaatcctaaa gaagctaaag
      781 caggaacaat tagagccgat tttgctgaga gtattgatgc taatgctgtt catggaagtg
      841 acagcttgga aaatgcaaaa atagaaattg attttttctt taaaccaaat gaaatttgct
      901 aaatgaaaat ccctttttct aagattaata caaaggaata tccttttaaa cttaatcttg
      961 aaaatatgat ttttgaggga aatttagtaa aaataaattc taagcttgtt aaaataaatg
     1021 ctattatgca aggttttatc tatagacctt gtgatagttg tggaactgag ttagaacttg
     1081 aaattaaaga aaatttagaa ctttttgcaa gtgatggtat ttttaaagat gaagcaaacg
     1141 aattgagcaa tactatagaa tttttcgatg gacatattga tttaatagaa gttgctatca
     1201 gcgagcttga agcttattta agtgattatt tttattgcat aaattgcaat aattaattaa
     1261 attttataaa ggagaaaaaa tggcagtacc aaagagaaga gtgagcaaaa ctcgtgcagc
     1321 taaacgcaga actcactata aagttagtct tcctatgcct ataaaagaca aagatggaag
     1381 ctacaaaatg cctcaccgtg cgaatccaac aactaaggaa tattaaaatc aatgattaac
     1441 attgccattg atgcaatggg tggtgatttt ggagaaaaac ccattataga aggcgtttta
     1501 aaggcgctag aagcaaaacc ttttaacgct atcttagtgg gaaattctaa aattctaaaa
     1561 cctttaatac caaaaaaatt agaacaatat atacaatacg aagaagctag tgaaattttt
     1621 tcgatgaatg aaaatgccac agatgcttta aaaaataaag aaacaaccat atacaaagct
     1681 attaatttat taaaagaaaa aaaagtagat gctgtagttt cagcgggtca tagtggagca
     1741 agtatgtctt tggctacctt aaggcttgga agacttaaag gcatttcaag acctgctatt
     1801 gccactttaa tgccaaatat cattaacaaa actttacttt tggatgttgg agctaataca
     1861 gattgtaaag ctgaaaattt atttcaattt gccataatgg gtgaagttta tgctagagca
     1921 atcatgcaaa ttcaaaaacc acgccttgct ttactttcta atggtgaaga agaatgcaaa
     1981 ggtaatgaac ttaccaaaga aagtcatcag cttatgaaaa aaattccaaa ttttataggt
     2041 aatgctgaag gtagagatat tttcaatggt gaaatagatg ttttagtctg tgatggtttt
     2101 gatggaaatg ttattttaaa ggcttgcgaa ggtgtagcaa cagctatttt tcaacttcta
     2161 aaaaacgaag taaaacaatc ttttatttct aaaataggtg ctttacttat gaagccatct
     2221 tttaaaaaat taaaaaaaca cacagattgg caagaatatg gcggagcacc ccttcttgga
     2281 gttaatggct gtgtgatcat aagtcatgga aaaagcgatt ctagagctat taaaaatgca
     2341 atttttcaag ctataaattt tagccaatct catatcaatg aacttataga aaatgaactt
     2401 gggaaataca atgcttaaag ccagtcttaa aagtatagct tcttatattc cagaaaaaat
     2461 tttaagcaat gctgatcttg aaaaaatggt agataccacc gatgaatgga tcactagacg
     2521 cacaggtatt aaagaaaggc gcattgctag tgaaaatgaa aatactagcg atttgggcac
     2581 aaaagctgca ttgaaagcca taaaaagagc aaatttaaaa cctgaagata ttgatgctat
     2641 tctcgtagcc actttaagtc ctgattattt tactatgcct tcaacagctt gtaaaattgc
     2701 ttcaaattta ggactcgtaa atatcagtgc ttttgatatt tcagcagctt gttctggttt
     2761 tatctattta cttgaacaag ctaaagcttt ggtagaaagt ggtttgaaaa aaaatgtttt
     2821 aatcatagga gctgaaaaaa caagttccat tatggattac aatgacagaa gtatttgcat
     2881 actctttgga gacggtgcgg gtgctggagt tgtaagcttg gataatgaaa atcacatcct
     2941 tgatgtacat actgcaagca atggtaatta tggagatctt ttaatgactc aaagatcgca
     3001 aaaatcaaac ctatgtcaaa cactttctat gcaaatgaaa ggcaatgaag tttttaaaat
     3061 agcagtaaac acacttagca atgatgttgt agaaatttta gccaaaaata acattttagc
     3121 acaagaaatt gatcttttta ttcctcatca agctaatcta cgcatcatta aagccgtcca
     3181 agaaaaactc aatctaagcg atgaaaaatg tgtgattacc gtacaaaaat atggcaatac
     3241 ctcagctgct tctataccta tggcaatgaa tgatgcctat gaagaaggtc gacttaaaaa
     3301 aggagatcta atcttactag atgcttttgg cggtggtttt acttggggat ctgcactttt
     3361 aaaatttgga ggagagaatt tttaattctc tcttagcttt ccaaaagctt gaatttccac
     3421 caaataaccc tctgctaaag cacttcctac acaagctcta ataggtttag ggtaattttt
     3481 aatccaagca tcataaattt cattcattgc atcaaaatct tgcatattag ctaaccagat
     3541 ttgaatttga atcaaatctc ctttgcatgc gcctattttt tcaaacaaag tatcaagttc
     3601 tgcaagtgct tctttagttt gttttttaat atctccgcta ggttcaaaag ccacttgtcc
     3661 tgcagtttta aaatatttat caaaaacaat aatttgcgac attctatcgc actcatcaaa
     3721 acgctttatc atgcatattt tccttgaaat tctttcataa attcacacaa ggtttttacc
     3781 tgatccaaat taagcgcatt ataaatactt gcacgaattc ctcctaaaat tctatgtcct
     3841 ttaagtccta tcattccagc ttcttcggct tcctttacaa aaagaggctc taaatcttta
     3901 tttttagcaa tattaaaact cacattcatt aaagatctat cctttttatc tgcatgtcct
     3961 ttataaaatc cattgcttaa atcaatacac tcataaagca tagcagcttt ttgagaattt
     4021 ttctcatgta ctttatcaag ttcgccttga tttaaaagcc aatccatttc aagattaaac
     4081 atataaatag caaaggttgg aggcgtgtta aacaaggact gattctcagc atgagtcaaa
     4141 taatttaaca tactaggaat ttgtttattt ttagatcttt ctaacatatc tttacggata
     4201 aaaatacaac ttaaacccga aattccagca tttttttgca ccccgccata aaaaagagcg
     4261 atatttgaaa aatctacttt tctagaaaaa aaatcactcg atgcatccac aatcaaagga
     4321 gctttagttt taggataatt ttgatattga gtgccgtaaa tagtattgtt agaacaaata
     4381 taagcataat cagcattatc actaaattcc actctaggaa tatgattaaa attactttcc
     4441 tcgctacttg ctacggtttt aacattgaca cctaaaattt gcgcttcttt aattgctttt
     4501 tttgtccaaa ctcctgtatt tgcatattca caaaccccat ttaaagacaa attcatagga
     4561 atcatagcaa attgtaaact tgctccacct tgtaaaaata atacttcata atcatcattt
     4621 aacccgtaaa gttttttagc tttctcttgt gctccaaaat gcacttcttc aaatactttt
     4681 gtgcggtgag aaatttccat tatagaataa cccctaccct gataatcaca gagttctttt
     4741 tgagcttgct ctaaaatttc taaaggtaaa gtcgatggcc ctgcactgaa attgattttt
     4801 ctcataatct atccttataa aatttttgct tctttttgag aagtttgaga acttaaaata
     4861 acaatatcat cactcttaag atcttctaaa tttgctattt taccattttt tctgatacaa
     4921 ataaactttt tgcttttatt aaaaaaattc tcatgttgca aataagcatt ttgcaattta
     4981 tctaatttta attcattata acgcatttga tttgctagta gatgatttaa ttgcttttct
     5041 atattatggc tttgttttat tttttcatct attatttttg gcaaagaatt aaatttgaaa
     5101 aatttgctta aatttaaaag caaattttca taattttgta ttttatgatt ccaaagttgc
     5161 atcaattttt cttccattaa atccaaactt tgctctatat ccagcttaga ataaaacaaa
     5221 gtatctatag cagctgaggg cgttggagct ctaaaatctg caacaaaatc actaataaca
     5281 taatcaatct catgtcctat ggctgaaatg ataggagttt ttgctttaaa aatctctctt
     5341 gctaaatttt catcattaaa acaaaaaaga tcttccctgc ttcctccacc acgtgctata
     5401 ataagaacat ctaaatccat atcatcggct ttttttaaag cttgtataag agaaaaagga
     5461 gcattatttc cttgagttaa agcatcaaaa atataaattt ttgccaaaaa atattctttt
     5521 tgatgaataa gttttaacat atcttgcaaa gcagcagaag tttttgaagt gataatgcct
     5581 acttttttag gaaattttgg caaagatttt ttaaagagtg gatcaaaaag tccttctttt
     5641 tgcaaacgct cttttaaagc caaaaactgt gcttccaaat ccccaaaacc tgcttttttt
     5701 atactagtag cgataaattg ataacgacca ctttcaggat ataaactcac acttccacaa
     5761 agctctaaaa aatcccccac agctggttta aatccgactt ttaaattagc tcctttaaac
     5821 atagcacaag caatgcttga tctttcatct tttaaatcaa aataccaatg ccctgaacca
     5881 tgcaaagtga tttttgaaat ttctccactt aaaactatat cctcaaaatg tgtttctaat
     5941 aaagcctttg ctttaagatt taattctgtc ggcgtcatag tttttttgct ataaacattg
     6001 aactcacgcc aaagctaaaa cttttataat caagcatttc aaaaccagca tttttaagtt
     6061 ctaagatgaa ctcttcctta cttaaaaatc cttcaataga gtttggcaaa tactcataag
     6121 cacttttatt tttactgatt atcccaccta tacttggtaa aatattttta agataaaaat
     6181 ctctacaagc tgctataaat ccaccctttt ctctttttgt aaattccaaa actaccaaaa
     6241 taccatcttt ttgaagcact ctagcaaatt cacttaaggc tttttgtctt tctataacat
     6301 tgcgaatgcc ataactaata cttaaaatat ctaaactttg actttctaaa ggcaaatttt
     6361 gcgcccctgc ttctataaat tcgacattcg gaaatttttc ttttgcaaca tttagcatac
     6421 cactacttgg atcaatacct ttaatattta aaatgttttt ttccattttt aaagcactct
     6481 cttgccaaat ctctatcata tcccctgtgc cacaggcaat atcagcgatt tttaaatctt
     6541 tttttaaata taaactcatc actctttgac aagctttttt gcgccacact acatcagctc
     6601 caaagcttaa aattctattc gccttatcat aagtaggtgc aatttgatta aacatttcta
     6661 taattttttc ttgtttttgc atttttatcc tttgtaaatt ttcaaatttt tacttgattt
     6721 tttaagcaat ttgcaaaatt tatttttatt attgattatt ttcgaaaaaa tatttttatc
     6781 tctatcttta caatattttt cataaagttt gtttaaattt tttatctcta aaaaacg
//
LOCUS       DAPWGO010000078         6703 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.080, whole genome shotgun sequence.
ACCESSION   DAPWGO010000078 DAPWGO010000000
VERSION     DAPWGO010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6703
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.080"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(96..1250)
                     /locus_tag="RJ336_001435"
     CDS             complement(96..1250)
                     /locus_tag="RJ336_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate transporter"
                     /protein_id="HDZ5213869.1"
                     /translation="MKTLVTFIKDGVKSVTDTAALFVFSILFFSVLNASGFFTKILNA
                     FLSKMKANVYQVCILTVFITAAVHLDGSGASTFLIVIPALLPIYERLGIRKTSMLLII
                     TSAMGVMNVIPWGGPTLRAATNIGMDANLLWHHIIPIQIVGLVLSLLLAIWIAKIEIK
                     RGAGAGNLSGINLNIEKSEHHNEKWFWLNLLVAIGVIGLLISGIFPSYICFMIGLAII
                     LPLNYPNLKIAKKVLDRASAGAMLMYITLIGAGILIGVFDKSGIMEKMGVLILNFVPD
                     YLGAYIPLMVGILAVPMAIIFCTDSYFYGVMPIVLSVTKAFGAEPLTIAIIMVIARNC
                     ATFISPVVPATLLGCGLAEVNIKDHIKRSFFYIWGISIICLIFAEVAGII"
     gene            1213..1437
                     /locus_tag="RJ336_001436"
     CDS             1213..1437
                     /locus_tag="RJ336_001436"
                     /inference="COORDINATES: protein motif:HMM:NF015397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HDZ5213870.1"
                     /translation="MTPSLIKVTNVLISKTPPLTPEQAHKNAVELAEHTKAWKGHEVL
                     IATHIDKGHIHTHFIVNSVNYENGHKLQWM"
     gene            1489..1863
                     /locus_tag="RJ336_001437"
     CDS             1489..1863
                     /locus_tag="RJ336_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001129922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TnpV protein"
                     /protein_id="HDZ5213871.1"
                     /translation="MAKSLFEELGGKYERQGDYLIPCLTVPAEEEQAIGIWGQRHLDY
                     LKQYRKVTYTNLLTSGRLNAYLADINRQAQERFERLIEGMKQAQGITEQLKAENALEW
                     TGCLNNIRACAREIVEKEIIFA"
     gene            2230..4149
                     /gene="tet(O)"
                     /locus_tag="RJ336_001438"
     CDS             2230..4149
                     /gene="tet(O)"
                     /locus_tag="RJ336_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032490535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance ribosomal protection
                     protein Tet(O)"
                     /protein_id="HDZ5213872.1"
                     /translation="MKIINLGILAHVDAGKTTLTESLLYTSGAIAELGSVDEGTTRTD
                     TMNLERQRGITIQTAVTSFQWEDVKVNIIDTPGHMDFLAEVYRSLSVLDGAVLLVSAK
                     DGIQAQTRILFHALQIMKIPTIFFINKIDQEGIDLPMVYREMKAKLSSEIIVKQKVGQ
                     HPHINVTDNDDMEQWDAVIMGNDELLEKYMSGKPFKMSELEQEENRRFQNGTLFPVYH
                     GSAKNNLGTRQLIEVIASKFYSSTPEGQSELCGQVFKIEYSEKRRRFVYVRIYSGTLH
                     LRDVIRISEKEKIKITEMCVPTNGELYPSDTACSGDIVILPNDVLQLNSILGNEMLLP
                     QRKFIENPLPMLQTTIAVKKPEQREILLGALTEISDGDPLLKYYVDTTTHEIILSFLG
                     NVQMEVICAILEEKYHVEAEIKEPTVIYMERPLRKAEYTIHIEVPPNPFWASVGLSIE
                     PLPIGSGVQYESRVSLGYLNQSFQNAVMEGVLYGCEQGLYGWKVTDCKICFEYGLYYS
                     PVSTPADFRLLSPIVLEQALKKAGTELLEPYLHFEIYAPQEYLSRAYHDAPRYCADIV
                     STQIKNDEVILKGEIPARCIQEYRNDLTCFTNGQGVCLTELKGYQPAIGKFICQPRRP
                     NSRIDKVRHMFHKLA"
     gene            4201..4374
                     /locus_tag="RJ336_001439"
     CDS             4201..4374
                     /locus_tag="RJ336_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich KTR domain-containing protein"
                     /protein_id="HDZ5213873.1"
                     /translation="MMKCEWILCPVCGSKTRNKIRKDTVLENYPLYCPKCRQERLIKV
                     DNLKITVIKEPDA"
     gene            complement(4749..6041)
                     /locus_tag="RJ336_001440"
     CDS             complement(4749..6041)
                     /locus_tag="RJ336_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001274343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDZ5213874.1"
                     /translation="MSANNNELISISHKIELKPNNKAKTHFKKAFGCARLAYNWGLAK
                     WQEYYKQGIKKSHLELKKEFNVIKKEQFPFVYEVSKYATQQPFLNLNLAFQKFFRDLK
                     QGKVSYPKFKKKKDNFGSYYIGGDQAIIKDEKYLKVPNLGLVKMKEKLRFNGKINSFT
                     ISQSADKFFVSFSMQISKDEYLKTHNKAKNNNLALSIDVGLKSFLSLSNGLEIKAPKP
                     LAKFNRLMIKRARQLSKKQHAKTKQEALQGIKKSSNYLKASIKLNKLHRKIANIRSDF
                     LHKLTSSLVANAKYFCLEDLNVKGMMSNHRLAKSISDVSFYEFKRQLEYKSSYNDKEI
                     YQVDRFYPSSKLCSNCGTIKENLALKDRVYICDECGISIDRDYNASLNLLSQLKQKIG
                     KVLAEFTPADLTALLNDLAINQIATSKVETGIQQKSYL"
     gene            complement(6028..6666)
                     /locus_tag="RJ336_001441"
     CDS             complement(6028..6666)
                     /locus_tag="RJ336_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS607-like element ISChh1 family transposase"
                     /protein_id="HDZ5213875.1"
                     /translation="MNKLLSIGQASKALGVTIQTLRNWDKKGLLKPDDMTKGGERRYK
                     LETLKAINKNLVFNKDSLKTIAYARVSSHDQKDDLIRQVQVLELYCSKQGFNYEVIQD
                     LGSGMNYYKKGLTKLLNQILDGKVKRLVLTHKDRLLRFGAELVFAICEAKEVEVIIIN
                     KGEESVKFEEELAKDVLEIITVFSARLYGSRSKKNKKLLDEMQEVVVENVSK"
BASE COUNT         2259 a         1174 c         1204 g         2066 t
ORIGIN      
        1 acaaaaaaac gcttatattt ttataaattt ttgactcaaa aatatcataa aacaatgaac
       61 caatcattga aaaatcaaaa gttcttttat tttaattata ttatcccagc tacctcagca
      121 aaaatcaagc aaataatact tataccccat atataaaaaa agcttctttt gatatgatct
      181 ttaatattaa cctctgctaa accgcaacct agcaaagttg caggcacaac aggagaaata
      241 aatgtcgcac aatttcttgc tatcaccatg ataatagcta tagtcaaagg ttcagcgcca
      301 aaagccttag ttacactcaa aactataggc atcactccat aaaaataaga atctgtacaa
      361 aaaataattg ccattggaac agccaatatc cctaccatca aaggaatata agcacctaaa
      421 taatctggaa caaaatttaa aatcaaaaca cccattttct ccataatacc acttttatca
      481 aatacaccta ttaatatccc agcaccaatt aaagtaatat acataagcat tgcaccagca
      541 cttgcacgat ctaaaacttt tttagctatt tttaaattag gataattaag cggtaaaatt
      601 attgcaagtc ctatcataaa gcaaatataa ctaggaaaaa taccactaat taaaagccca
      661 ataaccccaa tagctacaag taaatttaac caaaaccatt tttcattatg gtgttcgctt
      721 ttttctatat ttaaatttat tccagacaag ttacctgcgc ctgcacctct ttttatttct
      781 atcttagcaa tccaaattgc caaaagaagg gataatacca aacctacaat ctgaataggt
      841 ataatatggt gccaaagcaa atttgcatcc attcctatgt tagtagccgc tcttaaagta
      901 ggaccacccc aaggaataac attcataacc cccatagccg aagtaataat caataacatt
      961 gaagtctttc ttatacctag acgctcataa ataggtaata atgcaggtat tacaataaga
     1021 aaagtagaag cacctgaacc atctaaatgt acagcagcag taataaaaac agtaagaatg
     1081 caaacttgat atacattagc tttcattttt gataaaaacg catttaaaat tttagtaaaa
     1141 aaaccacttg catttaaaac actaaaaaag agtatagaaa aaacaaacaa agctgccgta
     1201 tccgttacgc ttttgactcc atctttaata aaagtaacca atgttttaat atcaaaaaca
     1261 cctcctttaa ccccggagca ggctcacaag aacgctgtcg agctggcaga gcatacaaag
     1321 gcatggaaag ggcatgaagt tctgatagcc acgcatatag acaaggggca tatacacacg
     1381 cactttattg tcaattccgt aaattatgag aacggtcata agctccaatg gatgtaggac
     1441 ggattttgcg gacattcaaa ataaaaaaga atgtggaggt aacagacaat ggcaaaatca
     1501 ttatttgagg aactgggcgg caaatacgaa aggcaagggg attatttgat accgtgctta
     1561 actgtacccg ccgaagaaga acaggcaata ggcatctggg ggcaacggca tttagattat
     1621 ctaaaacagt accgtaaagt tacatacacc aatcttctta caagcggcag gctaaacgcc
     1681 taccttgccg acatcaacag acaggcacag gaacgctttg aaaggctcat agagggtatg
     1741 aaacaggcac agggcataac ggaacagcta aaggcagaaa acgccttaga atggacagga
     1801 tgcctcaata acataagggc ttgtgcgagg gagattgtgg aaaaggaaat tatttttgca
     1861 taaacagatg attagtggca gggggaaatc ctgccgcttt ttctgcttta gtttgtcagc
     1921 ttgacaaata aagggttaaa gaatataatt agattcagta ttatacaagg agttaataaa
     1981 tatgcggcaa ggtattctta aataaactgt caatttgata gtgggaacaa aaagtagcag
     2041 tcccgtttca cttttaatat ggggcttagt tttttgtacc cagtttaaga atacttttat
     2101 catgtgattt tatatgcccg aaaacatata agtgttttgg ggctattgga gttatttacc
     2161 cagtgatagg agtatttatc actgggtatt tttatgccct tttttgggtg ttgataggag
     2221 gaaaatcaca tgaaaataat taacttaggc attctggctc acgttgacgc aggaaagaca
     2281 acattaacgg aaagtttatt gtataccagt ggtgcaattg cagaactagg gagcgtagat
     2341 gaaggcacaa caaggacaga tacaatgaat ttggagcgtc aaaggggaat cactatccag
     2401 acagcagtga catcttttca gtgggaggat gtaaaagtca acattataga tacgccaggc
     2461 catatggatt ttttggcgga agtataccgt tctttatccg tattagacgg agcagtatta
     2521 ttagtttctg caaaggatgg catacaggca cagacccgta tactgtttca tgcactacag
     2581 ataatgaaga ttccgacaat ttttttcatc aataaaattg accaagaggg gattgatttg
     2641 ccaatggtat atcgggaaat gaaagcaaag ctttcttcgg aaattatagt gaagcaaaag
     2701 gttgggcagc atccccatat aaatgtaacg gacaatgacg atatggaaca gtgggatgcg
     2761 gtaattatgg gaaacgatga actattagag aaatatatgt cagggaaacc gtttaaaatg
     2821 tcagaactgg aacaggaaga aaacaggaga ttccaaaacg gaacgttatt tcccgtttat
     2881 cacggaagcg ctaaaaacaa tctggggact cggcagctta tagaagtaat tgccagtaaa
     2941 ttttattcat caacgcctga aggtcaatct gaactatgcg ggcaggtttt taagattgaa
     3001 tattcagaga aaaggcggcg ttttgtttat gtgcgtatat atagcggaac attgcatttg
     3061 agggatgtta ttagaatatc tgaaaaagag aaaataaaaa tcacagagat gtgtgttccg
     3121 acaaacggtg aattatatcc atccgataca gcctgctctg gtgatattgt aattttacca
     3181 aatgatgttt tgcagctaaa cagtattttg gggaacgaaa tgctgttgcc gcagagaaaa
     3241 tttattgaaa atcctctccc tatgctccaa acaacgattg cagtaaagaa acctgaacag
     3301 cgggaaatat tgcttggggc acttacagaa atttcagatg gcgaccctct tttaaaatat
     3361 tatgtggata ctacaacgca tgagattata ctttcttttt tggggaatgt gcagatggaa
     3421 gtcatttgtg ccatccttga ggaaaaatat catgtggagg cagaaataaa agagcctact
     3481 gttatatata tggaaagacc gcttagaaaa gcagaatata ccatccacat agaagtcccg
     3541 ccaaatcctt tctgggcttc tgtcgggttg tccatagagc cgctccctat tggaagcgga
     3601 gtgcagtatg aaagcagagt ttcacttgga tatttaaatc aatcgttcca aaatgcggtt
     3661 atggaggggg ttctttatgg ctgcgagcag gggctgtatg gatggaaagt gacagactgt
     3721 aaaatctgtt ttgaatatgg attgtattat agtcctgtaa gtacccccgc agactttcgg
     3781 ctgctttccc ctatcgtatt ggagcaggct ttaaaaaaag cagggacaga actattagag
     3841 ccatatctcc actttgaaat ttatgcaccg caggaatatc tctcacgggc gtatcatgat
     3901 gctccaaggt attgtgcaga tattgtaagt actcagataa agaatgacga ggtcattctg
     3961 aaaggagaaa tccctgctag atgtattcaa gaatacagga acgatttaac ttgtttcaca
     4021 aatgggcagg gagtctgctt gacagagtta aaaggatacc agccagctat tggtaaattt
     4081 atttgccaac cccgccgccc gaatagccgt atagataagg ttcggcatat gttccacaag
     4141 ttagcttaac agcttgcaaa agtcatataa aatgagattt gaaaggatta gagactaatt
     4201 atgatgaaat gcgaatggat attgtgtcct gtttgtggga gcaaaacccg taataaaatt
     4261 aggaaggaca ctgttttgga gaattatccc ctttattgtc caaaatgcag acaagaaaga
     4321 ttgattaaag ttgacaactt gaagataact gtcatcaaag agccagacgc ttaagacgca
     4381 gagccgatga aattgtggaa caattcacga atcatcggct ctttttgttt cgtatttgaa
     4441 agaacaaact caccaaataa aaaaaacgat attcgggtgg gttattttgt tataccctaa
     4501 attaccctct gagtaagcac gaccttaaag acttaaagga acggtgcaac gagcagagct
     4561 gggaacaggg cttgcatgtg ccggagaaag gaaagacatt tgctggagaa gtccgggaag
     4621 aaacggtggc atggagcaaa gacacctacc agcttttgaa acaggcagag cagggaaagg
     4681 tcaaaagcta tgtgcaggat attgccgttc ctacaaacct ataaaatcct ataaaaagat
     4741 ataaaactct ataaatagga tttttgttgt attcctgttt caaccttgct agttgctatt
     4801 tgatttattg ctaaatcatt taacagagct gtcaagtccg caggcgtaaa ttcggcaaga
     4861 actttgccta ttttttgctt taattgtgaa agcaaattaa gactagcatt gtagtctcta
     4921 tcaatgctaa ttccacattc atcgcaaata taaactctat cttttagagc taaattttct
     4981 tttatagttc cacaattaga gcataattta gaactaggat aaaatctatc tacttgatag
     5041 atttctttat cgttgtagct agatttatat tctagttgcc ttttaaactc ataaaaactt
     5101 acatcgctta tagatttagc aagtctatga ttactcatca tcccttttac atttaaatcc
     5161 tctaagcaaa aatatttagc atttgctacc aagctagaag taagcttgtg taaaaaatca
     5221 cttcttatat ttgctatttt acgatgcaat ttatttagct taatacttgc ttttagataa
     5281 ttgctagatt ttttaatgcc ttgtaatgct tcttgcttgg tttttgcgtg ttgctttttg
     5341 cttagctgtc tagctctttt tatcattaaa cgattaaact tagctaatgg tttaggtgct
     5401 tttatctcta agccattaga taaacttaaa aacgatttta agcctacatc tatgctaagt
     5461 gctagattat tatttttagc tttattatga gtttttagat actcatcttt actaatttgc
     5521 atactaaaag aaacaaagaa tttatcagca ctttgagaaa tagtaaaaga attgatttta
     5581 ccattaaatc tcaatttctc tttcattttt acaagtccta aatttggcac ttttagatat
     5641 ttttcatctt tgattattgc ttggtctcca cctatgtaat aagagccgaa attatctttc
     5701 tttttcttaa attttggata gcttacttta ccttgtttta aatctctaaa aaatttttga
     5761 aatgctagat ttagatttaa aaaaggctgt tgcgtagcat atttacttac ttcataaacg
     5821 aaaggaaatt gttctttttt tataacatta aactcttttt taagctctaa atgagatttt
     5881 ttaatgcctt gcttatagta ttcttgccat ttagcaagtc cccaattata agcaagtcta
     5941 gcacaaccaa aggctttttt aaaatgagtt ttagctttat tatttggctt taactctatc
     6001 ttatgagaaa tgctaataag ctcattatta tttgctgaca ttttctacca ccacttcttg
     6061 catttcatct aaaagttttt tatttttctt tgagcgtgag ccataaagtc tagctgaaaa
     6121 tactgtgatt atttccaaca catctttggc taattcttct tcaaatttta cgctttcttc
     6181 gcctttattt attattatta cttctacttc tttggcttca catatagcaa atactagctc
     6241 agcaccaaag cgtaaaagtc tgtctttgtg agttaaaact aatcttttta ctttgccatc
     6301 tagaatttga tttagcaatt tagttaagcc ttttttataa taattcatac cagagcctaa
     6361 atcttgtata acttcataat taaagccttg tttagaacaa tatagctcta agacttgaac
     6421 ttgccttatt aaatcatctt tttggtcgtg gctagaaaca cgagcataag caatagtttt
     6481 taagctatct ttattaaaaa ctaggttttt atttatagct tttaatgttt ctagcttata
     6541 cctacgctct ccacccttag tcatatcatc aggttttaat aagccttttt tatcccaatt
     6601 tctaagagtt tggatagtaa caccaagagc tttactagct tgaccgattg ataataattt
     6661 attcatagga ctattttagc aaattttaaa aaataagtca agt
//
LOCUS       DAPWGO010000079         6539 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.081, whole genome shotgun sequence.
ACCESSION   DAPWGO010000079 DAPWGO010000000
VERSION     DAPWGO010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6539
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.081"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            411..2674
                     /locus_tag="RJ336_001442"
                     /pseudo
     CDS             411..2674
                     /locus_tag="RJ336_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002933025.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2771..4474
                     /locus_tag="RJ336_001443"
     CDS             2771..4474
                     /locus_tag="RJ336_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HDZ5213876.1"
                     /translation="MKKLNKLSLSLVVGSLLFTQSYALPSGGKFTHGTSGSISVSGGT
                     MNISGSKTNSVIQWGGGFNIANGETVNFKGNGYNYLNIVYGSKSSHIDGTLEGGTNNI
                     FLINPNGIVVGKDGSINANRVFLSASSIGDKEMKEFAKDGKISAFEGNPLTTASPVIK
                     SNAGNVINLGTITAGERVVMVGNQVSNMKYGSTDYGKFIFTNKKEQSNTVYLDVYSND
                     IFVIRGPASNTIKKEDSVMLSIRPNKGSTGPGGDPTDTIGYKETSDLVAKDNISNEVL
                     NSIFNDLKFNSSVDISDLSKFYKDGKILTADELTSINQSMDFITALYGQTQDSNNATF
                     ANALKEVLGNSYGNLGKANQAIIKTKEILSQIPKITEQQKNIQKAYDQAVDAYNEAVK
                     KYNAALSGVTGSNASETITALKTVLDKAYNDLKNAEANLESTTASNNSSLKSSNETLA
                     SVSIDGYKLTVNGEYLADYKTVNKPNDNNSGSNNGNDGTDSGDINNGNNNGSNNNPND
                     TIGQQEPDIATALLMQTTDEDPNINEDDKQASIDEASTQESGNACIVSDNFKAGNPCS
                     R"
     gene            4798..6528
                     /locus_tag="RJ336_001444"
     CDS             4798..6528
                     /locus_tag="RJ336_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDZ5213877.1"
                     /translation="MLEQSPYKEDANLKNYNNTLKVKDGVIIIDHSNTSDDNNSKTIN
                     TKKNTQKDNNNTQKNQPNLSNDNTLKTKTPNSNTPSLKNTSKEESIHKVSFSFHITNK
                     NINFKDLGLDEQVLQEALNDYKKESISVQDLQDIANIISYYVQVSGYPAATAYIPQQE
                     LKDQIQINITLGVLGKYVVQNNSSVRDYAIESKLPNHKGEIITTKLVEDAVYKVNEMY
                     GIQTLASLKAGDNPGETDVVIETTPSDSFVSVLFYGDNYGIKESGRYRGGASMSFNNI
                     AHQGDSLNAYLQRSDEAQTNYGISYTTFLGNLKITPSYSKGNYALGGIWREFDFIGTS
                     ENLGIDLKYPLWITTYNSFYLTSSYYHKKLSDSKFDILTFDKSSDTISFGIEGVYNGI
                     SNDSFSYSANVSYGNVKDEGMTIVGIGTSKVGGVEFGKFAKLNVNLNNAYFFNDTFTH
                     LFSLNYQQVINGATLDSSETISLGGPYGVRAYNNGDGEGDNAVVASFGLRMATPLKDF
                     YITPFYDIGYSWYENDSYTNYMDAYGLQLLYNKTGNFYVKLDLARALKKYKLDDDYSS
                     KAYVSFGKYF"
BASE COUNT         2571 a          921 c         1010 g         2037 t
ORIGIN      
        1 taattagaat tgcactcgtt ttttgcgatg ttacaaaaca ttgttatttt aattttattt
       61 tccaaggaca tctatgccag ctattaagct ttttaacttc acgggggcgg ggtatagaga
      121 aattttgttt taaactttct attgttacct tcttaagtat caacgctttt gcagccactc
      181 aagcaaatac tacagacaat cgaaatttca atattccaga gcattatttt aatgataacg
      241 aactttatga taaaagcaat tctacttata aaaaactcca aggtataaat tattatgcta
      301 agagttctaa acaagatatt aacaatatta ctttaattta taacaatcct aaaccaaata
      361 ttacaaatat aaacgattta aattttaaac attatttact tactcctgat atgagagaag
      421 atgaagttct ttcttttaaa gcaaggcatg gtgttaatac agccgatcat agtataaaaa
      481 cagttaaagt gcttcctttt ttaatcacag caaaaaccga tcatgctgat gcaagttata
      541 ataaacttat attagaacaa ggagaactta gttcggtttt ttatcttaaa cctaaagata
      601 ctcatataaa aaaccctagt aattctaaaa gcaatcaatg catgaatttc ttaatgagtt
      661 ctacctttac tcattatggt aatgcaagct ataaccaaac catacttcaa aaagatgctc
      721 atattagtat gggagttgag aacacttatg atttagcctt aaatggtgct ccttatttaa
      781 tcggagctat agccacttat ggagattcta caaataatag tttaaatata gaagcaggta
      841 gcagtgtaga gttttttact tccttaccta aaaaagataa aaatggtaat aatacctttg
      901 atgaaagaat cactcacctt gtaggtggtt tagcttatca aggtaatgta aaaaacaata
      961 aaatctttat caaagatgct aatatgatta tccatggtcc aagcaaagct tatgctagtt
     1021 cagctgctgc tcatattagc gcaggttata tagatagtgg aacagataaa aactttcaag
     1081 ccagtaaaaa ccttttagac atagatggtt ttaatcttga tatgtatatg aaccatgata
     1141 aacaacccct agcttataat tctgttttat ttgctgattt ttggggtgga aaaaccgaac
     1201 aaggacaagc cttagataat actatcaatt taaaagatat taaaaaccta aaaaaagata
     1261 aaaacaatga gaacattttt gctcaagctt tgtttaactt ctatgcagga gcttctaata
     1321 atggagaagc aaattataat accttaaaca tagaattaaa acatccttta gaaatcgcta
     1381 ataacttctt aggttataac caacattctt tttatggtgg ctttgcaact aaaggagcta
     1441 atcataatac cattaacatt aaaaacgatc ttaccacaac cgatctttct caaagctata
     1501 aagatgcttt aaatattgta gctgctagaa ccttagaagg cagtgcggat tataataaag
     1561 tttatatcaa taattctatg tcaaccttac ctgtatacat ttatacagct aagaaaaaca
     1621 ttcttaataa tcaagacttt tatcctagtg gtgctaataa caatgaagta gtgattaaag
     1681 actttgcttc ttttagaaat ctaactgtat taacagaagc taaagaagcc tcttataata
     1741 ctataaatta caacaatgtt caaagcatta ccgatgcaag taatatagat aaaggttcta
     1801 aaatcatcat aagagcttta gataaagcca atcataatac catagatata aaaaactatt
     1861 cttctaatgc agctgataat gcttatttga ttatggctta caatgaagca gcttataata
     1921 aaatcattat caatgatact ttatttggtg tagcttcaga taaaagagaa ggaattttaa
     1981 gtattatagc tggactttca aacaatgccc atgataatac cttaatcata aacaatctta
     2041 atcttgatga gtataaaaat aacaattcta tttttatagc tccttcagcc attacaggtt
     2101 taagtgaagc taaatcttat aataatacct tatatatagg cgggaattta aatatattta
     2161 aaaacacttt catagatata ttagcagggg ctttagtgca ttatgaagat agcaatagtg
     2221 cttctaatgc tgtagctcct tcagatatca gtttaagtaa aaacaataga ctgatttaaa
     2281 tactaaagtt gaagctagaa ttattaataa ctttgagcat tattatctta ttgtatccaa
     2341 taaaatcaac acaacccccc ttttgaagtc atacgatgct cctattaata tttctagcga
     2401 gggagtatta gctctttaca ccctcaaaga gcaatacccc taccttaaaa ataaagaaat
     2461 cttaatctta caaagtgagc aaggttttat agatgaaaat tctaatactt taaatcaaga
     2521 agaacttcaa agctttattg aaaaaatgca aaaaaacaaa gaagatttta aactaagttc
     2581 tatagataga ttaaaaaaga tgaatttaca aaaactttct tatgaagtaa gaatatccca
     2641 agatggtaaa agcatttacg caaagataaa ataaatcatt cctatcttaa agataggaat
     2701 cttttgcttg tatttttata aatataaaca aaagattctt aaatcttaat cttacaaaaa
     2761 ggagcaagtc atgaaaaagt taaataaact ttctttgtct ttagttgtag gttctttact
     2821 ttttacacaa agctatgctt taccaagtgg gggtaagttc actcatggaa caagtggaag
     2881 tataagtgtt agtggtggca ctatgaatat ctcaggaagt aaaacaaact ctgttatcca
     2941 atggggtggt ggttttaata tagcaaatgg tgaaactgta aattttaaag gtaatggcta
     3001 taactactta aatattgtct atggttctaa aagctctcat atagatggaa cactagaagg
     3061 tggtacaaac aatatctttt taatcaatcc taatggtata gtagtgggta aagatggaag
     3121 tattaatgca aatagagtgt ttttatctgc ttcatcgata ggggataaag agatgaagga
     3181 gtttgcaaaa gatggaaaaa tttcagcatt tgaaggaaat cctctgacaa cagcatcacc
     3241 tgtaattaaa tccaatgcag gaaatgttat aaatttagga actataacag caggagaaag
     3301 agttgttatg gtaggcaatc aagtttcaaa tatgaaatat ggtagcactg attatggtaa
     3361 attcattttt acaaataaaa aagaacaatc caataccgtc tatcttgatg tctatagtaa
     3421 tgatatattt gtcattcgtg gtcctgcatc aaatacaata aaaaaagaag actctgtaat
     3481 gttgagtata agacctaata aaggctcaac tggaccagga ggagatccga cagacacaat
     3541 aggttataaa gaaactagtg atcttgttgc taaagataac atctcaaatg aagttttaaa
     3601 ttctatattt aatgacttga aatttaattc tagtgttgat attagcgact taagtaaatt
     3661 ttataaagat ggaaaaatat taacagctga tgaattaaca agtattaatc aaagtatgga
     3721 ttttattact gctttatatg gacaaactca agatagcaat aatgcaacat ttgcaaacgc
     3781 tttaaaggaa gtattgggaa attcttatgg taatctagga aaagctaatc aagccattat
     3841 taaaacaaag gaaattcttt ctcaaattcc taaaataacc gaacaacaaa aaaatattca
     3901 aaaagcttac gatcaagctg tagatgctta caatgaagca gtgaaaaaat acaatgctgc
     3961 tttaagtgga gtaacgggta gcaatgctag tgaaactata actgctttaa aaactgtttt
     4021 agataaagca tataatgatt taaaaaatgc tgaagctaac cttgaaagca ctacagcaag
     4081 caataattct agcttaaaaa gttctaatga aactttagca agtgtaagca tagatggtta
     4141 taaactcaca gttaatggag aatatcttgc agattataaa actgttaaca agcctaatga
     4201 taacaatagt ggttccaaca acggaaacga tggaaccgat tcaggtgata ttaacaatgg
     4261 taataacaac ggttctaata acaatccaaa tgataccata ggacaacaag aacctgacat
     4321 tgctacagct ttgcttatgc aaactacaga tgaagatcca aatatcaatg aagatgataa
     4381 acaagcaagt atagatgaag ccagtactca agaaagtggt aatgcttgta tagtatcgga
     4441 taattttaaa gcaggaaatc cttgctcaag atgattaaaa tccaaaaggt taaaagcctt
     4501 ttggatcttg ttaaaaatta ataaaacaaa caaaatttaa agattaaaaa tcaaaaaaga
     4561 ttgataatca atcaaacaaa tacaaaaaat aaagaaaaat aaaaagataa aaagaaagaa
     4621 aaaataaaaa cagaaaaagc aaaaaataaa aaagattaaa aactaaatct ataaaacaag
     4681 ctcttatgaa atcattaaaa aggaaaaaca caaatgaaac gcattatctt actatctagt
     4741 ttagctatct taagccttta tgctagtgat actaaagata ataaaaaaac catacaaatg
     4801 ttagaacaat ctccttataa agaagatgct aacttaaaaa actacaataa cactttaaaa
     4861 gtaaaagatg gagtgattat catagatcat tctaatacta gtgatgataa taattcaaaa
     4921 accatcaaca caaagaaaaa cactcaaaaa gataataaca acactcaaaa aaatcaacct
     4981 aatttgtcta atgataatac tttaaaaact aaaaccccaa attcaaacac tccttcttta
     5041 aaaaatactt ctaaagaaga atcaattcat aaagttagct ttagctttca tattaccaat
     5101 aaaaacataa actttaaaga tctaggttta gatgagcaag ttttacaaga agccttaaac
     5161 gattacaaaa aagaaagtat ttcagttcaa gacttacaag atatagccaa tattatttct
     5221 tattatgttc aagttagtgg ctatcctgct gctacagctt atatcccaca acaagaacta
     5281 aaagatcaaa ttcaaatcaa tatcacctta ggtgttttag gtaaatatgt ggttcaaaac
     5341 aattctagtg taagagatta tgctatagaa agtaaattac ctaatcacaa aggtgaaatc
     5401 atcactacta aattagtaga agatgcggtt tataaagtca atgaaatgta tggcatacaa
     5461 acccttgctt ctttaaaagc aggagataat ccaggtgaaa cagatgtagt gatagaaact
     5521 acccctagtg atagctttgt ttctgtattg ttttatgggg ataattacgg tataaaagaa
     5581 tcaggcagat ataggggtgg tgctagtatg agttttaata acatagctca tcaaggagat
     5641 agtcttaatg cttatttgca aagaagcgat gaagcacaaa ctaactatgg tataagctat
     5701 actactttct tagggaattt aaaaatcact ccaagttatt ctaaaggaaa ctatgcttta
     5761 gggggaattt ggagagaatt tgactttata ggaacttctg aaaatctagg tatagattta
     5821 aaatatcctt tgtggattac gacttataat tctttttatt taacttcaag ctattatcat
     5881 aaaaaactta gtgattctaa atttgatatt ttaacctttg ataaaagctc tgatacgata
     5941 agctttggta tagaaggagt ttataatggc attagcaatg atagtttttc ttatagtgct
     6001 aatgtaagct atggtaatgt taaagatgaa ggtatgacta tagtaggtat aggaacaagc
     6061 aaagtaggtg gagtagaatt tggaaaattt gctaaactta atgtcaatct taacaatgct
     6121 tatttcttta atgacacctt tactcatctt tttagcttaa attatcaaca agttatcaat
     6181 ggagctacat tagatagtag tgaaaccata tctttaggag gtccttatgg agtaagggct
     6241 tataataatg gagatggaga aggagataat gctgtagtgg ctagctttgg acttagaatg
     6301 gccactcctt taaaagattt ttatatcact cctttttatg atataggtta ttcttggtat
     6361 gagaatgatt cttatacaaa ctatatggat gcttatggtt tacaactact ttataataaa
     6421 acagggaatt tttatgttaa gcttgattta gctagagctt taaagaaata taaactagat
     6481 gatgattata gttctaaagc ttatgtaagc tttgggaagt atttttgagt tttagcaag
//
LOCUS       DAPWGO010000080         6317 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.082, whole genome shotgun sequence.
ACCESSION   DAPWGO010000080 DAPWGO010000000
VERSION     DAPWGO010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6317
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.082"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..515)
                     /locus_tag="RJ336_001445"
     CDS             complement(<1..515)
                     /locus_tag="RJ336_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDZ5213878.1"
                     /translation="MNKILSLPEDLKQLKGVNYKKIKSCTFAKYTQTDTSHSTFVNVG
                     SHLLTFVRKGYKILHTASKDYKINSYETLFLKAGSYTLSNVGLSKGVYEAYLFFFDNA
                     FLIELIYKYKDFFKLDQKFQNYEIFWVKNDKILQGILESFSPHFEENTQILDPIVSLK
                     FEEIFLHLLLN"
     gene            complement(512..1117)
                     /locus_tag="RJ336_001446"
     CDS             complement(512..1117)
                     /locus_tag="RJ336_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDZ5213879.1"
                     /translation="MWDKKIIAISDRKCVEIDFLKQIEKLAKAKVDAIVLREKDLSEF
                     EYYDLAKEVLSICVKQKVTCFLHFFDRECLKLGHRYFHAPLSLLRKEPKLIKYFHILG
                     TSVHSKEELLEAMSYKVNYAFVGHIFESSCKVGLEPKGIDFLKSLLEFSQIPLYAIGG
                     INTQNIENFKDINIAGVCMREILMKEKDLKKYLLECRQNLR"
     gene            complement(1107..2252)
                     /gene="thiH"
                     /locus_tag="RJ336_001447"
     CDS             complement(1107..2252)
                     /gene="thiH"
                     /locus_tag="RJ336_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HDZ5213880.1"
                     /translation="MQDYMQYLPHMQEIKSEILNKVLTQVQSYDESQFSAKDVKNALN
                     QTHLSIEHLKALLSSAAEDFIEELAFKSAKVKQKYFGNSISLFTPLYLSNYCNSKCVY
                     CGFQKGNKIARAKLSEAEIHEEMQAIAKSGLEEILMLTGEGREFASVEYIANACKIAR
                     EYFKVVGVEIYPMNEDEYKILHEKGCDYVTVFQETYNALKYSKIHLAGEKRIFPYRFN
                     AQERALKAGMRGVAFGALLGIDDFRKDALATALHAHFLQQAYPHAEISISVPRLRPII
                     NNAKIHPKDVSEKRLLQVLCAYRLFLPFAGITISSRERIGFRDEVIKLGATKMSAGVS
                     VGIGEHKGEKKGDEQFEISDDRSVDEILAMLKRSNLQAVMSDSIYVG"
     gene            complement(2255..3031)
                     /locus_tag="RJ336_001448"
     CDS             complement(2255..3031)
                     /locus_tag="RJ336_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HDZ5213881.1"
                     /translation="MQENLKNDKLKIGKYEFDSRFILGSGKYSLELIKSAIEEAKTQI
                     ITLALRRANTGEIANILDYIPKNITLLPNTSGARNADEALRIARLSRELGCGELIKIE
                     VISDSRYLLPDNYETIKACELLAKEGFTPLPYMHADLYAARAMRDAGAAAIMPLAAPI
                     GSNKGLCAKEFIQILLNEIDLPIIVDAGIGSPSQACEAMQMGVSAVMVNTAIAEAKDV
                     ALMAKAFSLAVNAGRAAFLAGLASVSKAKASSPLTGFLRD"
     gene            complement(3034..3837)
                     /gene="thiF"
                     /locus_tag="RJ336_001449"
     CDS             complement(3034..3837)
                     /gene="thiF"
                     /locus_tag="RJ336_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine biosynthesis protein ThiF"
                     /protein_id="HDZ5213882.1"
                     /translation="MMRVKFNGKELDTDFKTSLEFFENISKNENDVWIINGFATKENI
                     ALNENDELFCIEKNTLPPKDALDAMMRARHTPKLHDKLKNGRVAVCGLGGLGSHIAIN
                     LARSGVGYLKLIDFDVIEPSNLNRQAYRVSDLGKFKTEALKEQISEINPYISVEICTL
                     KIDEDNLESLFKDIDIVCEAFDSAIAKAMIAQNFHRFYKDGILICASGLAGYGDSNSI
                     QTRKIAKNFYVCGDLVNGAKVGNGLMAPRVNICAGHQSNLVLELLANKE"
     gene            complement(3834..4025)
                     /gene="thiS"
                     /locus_tag="RJ336_001450"
     CDS             complement(3834..4025)
                     /gene="thiS"
                     /locus_tag="RJ336_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HDZ5213883.1"
                     /translation="MIINGQKLELKELKFMDFIKEKGLKIELIALELNGEIIPKSEFE
                     NLILKENDKAEIVSFVGGG"
     gene            complement(4022..5467)
                     /locus_tag="RJ336_001451"
     CDS             complement(4022..5467)
                     /locus_tag="RJ336_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDZ5213884.1"
                     /translation="MNLNQTLQEKYPHLEVSVLKLSEVKKNIDFRIDDSFWTMKLIYN
                     NKLNYKKIGECLLKSQYGISINMNEEGDGIPIYRMNDIDNMLCNFEVKKYALIDKNEL
                     QTFRLNYGDVLFNRTNSYEFVGRTGIFYNNRENFVFASYLVRLVCNKEILLPEYLTVF
                     LNTHIGKKEIRRRARPSINQANVNPEELKEIKIPIFPMEFQLEIQNLVKDSHKALEES
                     KELYKKAEETLYLELGLDPKNPLQSLLDSKTNNPTKSLNISIHTLKESFLKTGRLDSE
                     YYQSKYEDIEKMIRSYKDGFCNLKDLVNDISSGFAFSSDDYQDVGELVLIRINNIKNA
                     TLDLSNVIYLKNEAYNLSPKDKIKKGDILISMSGSIGLSCVVRDDISAMVNQRILKIS
                     IKNFNSDVLVLLLNSFICKMQFERIGTTGGVQTNLSSIDMQNILIPKIDSTTQEKIAK
                     YIQESFNLRKKSKQLLDNAKIKVEEQIQGKI"
     gene            complement(5593..6096)
                     /locus_tag="RJ336_001452"
     CDS             complement(5593..6096)
                     /locus_tag="RJ336_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213885.1"
                     /translation="MYHLLDFSTCKCENEKFDLAYKIFKQDFIEVPLYLAGCIYIDPQ
                     SHKKHKGKEKIFWHITTRENKQNKTREFDSQRACRINWIKQIIINHTHPEIKAFYYKE
                     KRAIRFYLWLYNHNFIVILQKLGRSSSFLVTSFYIDKGYNKNIYEKRYRNYINGNDIE
                     LKNCEWF"
     gene            complement(6096..>6317)
                     /locus_tag="RJ336_001453"
     CDS             complement(6096..>6317)
                     /locus_tag="RJ336_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlfA"
                     /protein_id="HDZ5213886.1"
                     /translation="TIQSHESNIVQLVDLLIGAISYKARNDIEHVSEIKNYIINKIET
                     LANIELDAGTPPWENKFNIFRIQLSKGEQ"
BASE COUNT         2030 a         1200 c          757 g         2330 t
ORIGIN      
        1 ttatttaaaa gcaaatgtaa aaaaatctct tcaaatttca aactcactat aggatctaaa
       61 atttgcgtat tttcttcaaa atgcggtgaa aaactttcca aaattccttg caaaatctta
      121 tcatttttta cccaaaaaat ttcatagttt tgaaactttt gatctagttt aaaaaaatct
      181 ttatacttat aaataagttc aattaaaaat gcattgtcaa aaaaaaataa ataagcttca
      241 taaactcctt tactaagtcc tacattgctt aaagtatagc tcccagcttt taaaaacaaa
      301 gtttcataag agttaatctt ataatctttt gatgcagtgt gtaaaatttt atatcctttg
      361 cgaacaaaag ttaaaagatg acttcctaca ttaacaaaag tagaatgcga agtatccgtt
      421 tgtgtatatt tagcaaaagt gcaagattta atttttttat aattgacacc ttttaattgc
      481 tttaaatctt ctggtaaaga aagaatttta ttcatcgtaa attttgccta cattctaaaa
      541 gatacttttt aagatctttt tctttcatta aaatttcacg catacaaacg cctgctatat
      601 ttatatcttt aaaattttct atattttgag tattgatacc gcctatagca taaagtggaa
      661 tttgactaaa ttcaagcaag gattttaaaa aatcaatccc tttaggctct aaacccacct
      721 tgcaagaact ttcaaaaata tgccctacaa aagcataatt taccttataa ctcatcgcct
      781 ctaaaagctc ttctttacta tggactgaag tgccaagtat atgaaaatat tttattaatt
      841 taggctcttt tcttagcaaa gaaagcggtg cgtgaaaata acgatgcccc aattttaaac
      901 actccctatc aaaaaaatgc aaaaaacaag tcactttttg ctttacgcaa atgcttaaaa
      961 cttcttttgc taaatcataa tactcaaatt cgcttaaatc tttttctctt aaaactatag
     1021 catctacctt agccttagca agtttttcaa tctgctttaa aaagtctatt tctacacatt
     1081 ttctatcgct tatggcgatg atttttttat cccacataga tactatcgct catcacagct
     1141 tgtaaattgg atcttttaag catagctaaa atttcatcta cgcttctatc atctgaaatt
     1201 tcaaactgct catcaccctt tttctcaccc ttatgctcac ctatacccac actcactcct
     1261 gcactcattt tagtagcacc aagcttaata acctcatctc taaagcctat tctttcacga
     1321 cttgaaatgg taatgcctgc aaaaggtaaa aaaagtctat aagcacaaag tacttgcaaa
     1381 aggcgttttt cactcacatc tttaggatga attttagcat tattgataat aggccttaaa
     1441 cgtggtactg aaatagaaat ttcagcatga ggataagctt gttgtaaaaa atgcgcatga
     1501 agtgccgtag caagggcgtc ttttctaaaa tcatctatac ccaaaagtgc gccaaaagcc
     1561 actccacgca tacccgcttt taaagctctt tcttgagcat taaagcgata agggaaaatg
     1621 cgtttttcac cagctaaatg aattttagaa tattttaaag cattgtaagt ttcttgaaaa
     1681 acagtcacat aatcacaacc cttttcatgc aaaattttat attcatcttc attcatagga
     1741 taaatttcaa cgcctacaac cttaaaatac tctctagcta ttttacaagc atttgctata
     1801 tattctacac ttgcaaactc cctaccctcg cctgttagca ttaaaatttc ttctaaacca
     1861 cttttagcaa tggcttgcat ttcttcgtga atttcagctt cacttagctt ggctcttgcg
     1921 attttattac ctttttgaaa accacaataa acacatttag aattacaata atttgacaaa
     1981 taaagtgggg taaaaagaga gatagaattt ccaaaatatt tttgcttgac tttagcggat
     2041 ttaaaggcta attcttctat gaaatcttct gctgcacttg aaagcaaagc ttttaaatgc
     2101 tctatgctta aatgtgtttg atttaaagca tttttaacat ctttagcgct aaattgactc
     2161 tcatcataac tttgaacttg agttaaaacc ttgtttaaaa tttcgctttt tatttcctgc
     2221 atatgaggta aatactgcat ataatcttgc ataatcaatc ccttaaaaag cctgttaatg
     2281 gagaacttgc tttagcttta ctcacacttg ccaaacctgc taaaaaagcc gctcttcccg
     2341 catttactgc caaagaaaac gctttagcca ttaaagcaac atcttttgct tcagctatgg
     2401 ctgtatttac catcaccgca cttactccca tttgcatagc ttcacaagct tgtgaaggac
     2461 ttccaatacc cgcatctaca atgataggca aatcaatttc attaagcaaa atttgtataa
     2521 attccttagc acataaacct ttattgctcc caataggcgc tgctaaaggc atgatagccg
     2581 cagctccagc atcacgcata gctctagctg cgtaaagatc agcatgcatg taaggtaggg
     2641 gcgtaaaacc ctctttagct aaaagctcac aagctttaat cgtttcataa ttatcaggca
     2701 gcaaatacct actatcgctt atcacttcta tcttgataag ttctccacaa ccaagctctc
     2761 ttgaaagcct tgcaatgcgt aaagcttcat cggcgtttct tgcgcctgaa gtgttgggta
     2821 aaagtgtgat atttttaggg atataatcaa gtatattagc aatttcccct gtatttgcac
     2881 ggcgtaaggc tagagtgata atctgtgttt tagcttcttc tatagctgat tttataagct
     2941 ctagcgaata ttttccagaa cctaaaataa atcttgaatc aaactcgtat ttgcctattt
     3001 ttaatttatc gttttttaaa ttttcttgca tttttactcc ttatttgcta aaagctctaa
     3061 aacaaggtta ctttgatgtc ctgcgcaaat atttaccctt ggcgccataa gtccatttcc
     3121 caccttagca ccatttacca aatccccgca cacatagaaa tttttagcaa tttttcttgt
     3181 ttgtatgctg ttgctatcac catagcccgc aagccctgaa gcgcagatta aaataccatc
     3241 tttgtaaaat ctatgaaaat tttgcgctat cattgctttt gcgatagcac tatcaaaggc
     3301 ttcacaaact atatctatat ctttaaacaa agactctaaa ttatcctcat caatttttaa
     3361 agtacaaatt tcaacgctga tataaggatt aatttcgcta atttgctctt ttaaagcttc
     3421 ggttttaaac ttgcccaaat cacttacacg gtaagcttga cgatttaaat tactaggctc
     3481 aatcacatca aaatcaatca actttaaata ccccactcca cttcttgcca aatttatcgc
     3541 tatatgtgat ccaagtccgc ctaaaccaca caccgccacg cgcccatttt taagtttatc
     3601 gtgaagcttt ggtgtatgtc ttgctctcat catagcatct agtgcgtctt ttggaggtaa
     3661 agtatttttt tctatacaaa aaagctcatc attttcattt aaagcgatat tctcttttgt
     3721 tgcaaaacca ttgataatcc atacatcatt ttcatttttg ctgatatttt caaaaaattc
     3781 caaacttgtt ttaaagtctg tatcaagttc tttgccattg aattttactc tcatcatcca
     3841 cctcctacaa aacttacgat ttcagcttta tcgttttctt ttaaaatcaa attttcaaat
     3901 tcactcttag gtataatctc tccatttaat tccaaggcga taagttctat tttcaagcct
     3961 ttttctttga taaaatccat aaatttaagc tcttttaact caagcttttg tccattgata
     4021 atcatatttt tccttgtatt tgctcttcta ctttaatttt tgcattatct aataattgtt
     4081 tagatttttt ccttaaatta aagctttctt gtatatattt tgcaattttt tcttgagttg
     4141 tagaatctat tttagggata aggatatttt gcatatctat tgaagaaaga tttgtttgaa
     4201 ccccacctgt agtaccaatt ctctcaaatt gcattttaca aataaaagaa tttaaaagca
     4261 ataccaaaac atcactatta aaatttttaa tcgaaatttt taaaatcctt tgattaacca
     4321 tagctgatat atcatctcta accacacaag acaaaccaat gctaccagac atagaaatta
     4381 aaatatcacc tttttttatt ttatctttag ggcttaaatt ataagcttca tttttaagat
     4441 agataacatt gcttaaatct agcgtagcat tttttatatt attaatccta attaatacaa
     4501 gctctccaac atcttggtag tcatcacttg aaaatgcaaa accacttgaa atatcattaa
     4561 ctaaatcttt taaattacaa aagccatctt tataacttct aatcatcttt tctatgtctt
     4621 catatttact ttgataatat tcagaatcca atcttcctgt ttttagaaaa gattctttta
     4681 atgtgtgtat agagatattg agtgattttg taggattatt tgttttagaa tctagcaaac
     4741 tttgcaatgg attctttgga tcaagtccta actcaaggta taaagtttcc tctgcttttt
     4801 tatataactc cttactttct tctaatgcct tatgagaatc ttttaccaaa ttttgaattt
     4861 ctaactgaaa ttccataggg aaaatgggaa ttttaatttc ttttaattct tcaggattta
     4921 cattagcttg attaattgat ggtctagccc ttcttcttat ctctttttta ccaatatgcg
     4981 tatttaaaaa aactgtaaga tactctggca acagaatttc cttattgcaa acaagcctta
     5041 ctaaatatga agcaaaaaca aagttttctc tattgttata aaaaattcct gttctgccca
     5101 caaactcata ggaatttgtt ctattaaaca aaacatctcc ataatttaac ctaaaagttt
     5161 gcaattcatt tttatcaatt aaagcatatt ttttgacttc aaaattacaa agcatattat
     5221 caatgtcatt cattctataa atagggatac catcgccctc ttcattcata tttattgaaa
     5281 taccatattg agattttaat aaacattctc ctattttttt atagttcaac ttattgttat
     5341 aaataagctt cattgtccaa aaactatcat ctatgcgaaa atctatattt tttttcactt
     5401 cactaagctt taatacactt acttctaaat gtggatattt ttcctgcaaa gtttggttta
     5461 gattcatttt attccttttt ttatttcaat ctaagtaaaa aatatttata attataaagc
     5521 tcaactaccg gtggtagaaa gagatggcta gcttttatgc ttcttgcaga tgcctaaatc
     5581 tgcaccaaac ccctaaaacc attcgcaatt ctttagctct atatcatttc cgtttatata
     5641 atttctatat cttttttcat aaatattttt attatatcct ttatctatgt agaaacttgt
     5701 cactaaaaat gaactacttc tgcctagctt ttgtaaaata actataaaat tatggttata
     5761 taaccacaaa taaaaacgga ttgcccgttt ctctttataa taaaaagctt taatttcggg
     5821 atgagtatga ttgataataa tttgtttaat ccaatttatt ctgcaagctc tttggctatc
     5881 aaactccctt gttttatttt gtttgttttc tcgtgttgtg atatgccaaa atatcttttc
     5941 tttcccctta tgcttcttat gtgattgcgg atctatataa atacaacctg ctaaatacaa
     6001 tggaacctca ataaagtctt gtttgaaaat tttataagct aagtcaaatt tttcattttc
     6061 acatttacaa gtgctaaaat ccaagaggtg atacattatt gttcaccttt actcaattga
     6121 atcctaaaaa tattaaattt attttcccaa ggtggcgttc ctgcatccaa ttcaatattt
     6181 gccaatgttt caattttatt tataatataa ttttttattt cgcttacatg ctctatatca
     6241 tttcttgctt tgtatgaaat agcacctatt aacaaatcca caagttgaac aatatttgat
     6301 tcatgtgatt gaattgt
//
LOCUS       DAPWGO010000081         6270 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.083, whole genome shotgun sequence.
ACCESSION   DAPWGO010000081 DAPWGO010000000
VERSION     DAPWGO010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6270)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6270)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6270
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.083"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..300
                     /locus_tag="RJ336_001454"
     CDS             <1..300
                     /locus_tag="RJ336_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213887.1"
                     /translation="FLLCTLALFLPFINIFVYYLAFYYLFHKLLMIDVTSTILDKESF
                     KNFHSDFSPLEFKFSTLCFYLLSSVPLLGLFLQVFFVIFLTHLAYQRILKLKAKA"
     gene            complement(283..1248)
                     /gene="tilS"
                     /locus_tag="RJ336_001455"
     CDS             complement(283..1248)
                     /gene="tilS"
                     /locus_tag="RJ336_001455"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDZ5213888.1"
                     /translation="MQIKDEILALLKRGKNLLAFSYGSDSSALFYLLMQEKIDFDLVM
                     INYKTRKNSDLEELKAKELALKFHKKIFIKHAPKFQSNFEKKARDFRYDFFEKICLEQ
                     DYDHLILAHHLNDQFEWFLMQLSRGAGLAEILGMQECEKRSNYTLLRPLLFISKDEIS
                     SFLKEKDIFYFYDESNENEKYFRNYIRKNFSNAFVSKFHQGLKRSFSYLDKDRKKLYD
                     FENIKEIQGLLICPKNESLIARAVKMKGLLLSTAQRKELLKGDCVLGGKIALVYKNEQ
                     AIVFEYETCQKLPKNFKEECRIAKIPRLLRAYLYNHKIDISSLSF"
     gene            complement(1238..2557)
                     /gene="rimO"
                     /locus_tag="RJ336_001456"
     CDS             complement(1238..2557)
                     /gene="rimO"
                     /locus_tag="RJ336_001456"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDZ5213889.1"
                     /translation="MSKLYLMSLGCNKNLVDSEIMLGRLSAYELCDEPSKADVLIVNT
                     CGFIDSAKKESINAILDLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDY
                     ERIDEMILKKTNLFSNSTYLQSENSKRIITGSNSHAFIKIAEGCNQKCSFCAIPSFKG
                     KLKSREISSIIAELKDLVARGYKDFSFIAQDTSSYLFDKGEKDGLIRLIDEVEKIKGI
                     RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHISDNMLKIMKRGANSTRLKEM
                     LNLMKSAPNSFLRTGFIVGHPGESEADFEELCEFVKDFGFDRVSVFAYSKEEDTAAFD
                     MEQVPFKAINKRLKIIEKIVDEVIEKSFEKEVGQKRLVVCTGESSEGEFFIAAKDLRW
                     DREIDGEILINESECGNLEMGQIYECEILQNLDKKLLAKALRKVDAN"
     gene            2631..3728
                     /gene="prfB"
                     /locus_tag="RJ336_001457"
     CDS             2631..3728
                     /gene="prfB"
                     /locus_tag="RJ336_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDZ5213890.1"
                     /translation="MDNYEFSELLKTLKNKVGNIASIIKPENIQTRLKEIEELENSPS
                     FWSDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLANSENDTETLEALFNDA
                     PKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGF
                     KVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSS
                     VMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQND
                     RSQHKNKATAFKMLKSRLYELELMKQQDSANAGEKSEIGWGHQIRSYVLFPYQQVKDN
                     RSGEAFSQVDNILDGDIKKMIEGVLIALKAE"
     gene            complement(3810..4202)
                     /locus_tag="RJ336_001458"
     CDS             complement(3810..4202)
                     /locus_tag="RJ336_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011117589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213891.1"
                     /translation="MKKILTSALALGAMTLIVGCGDGDLVELKNNGNDQAMFDLGNQE
                     IMKKYPNYKLYDYTSVRAISDIKDPEGKIKEMKRDLEIDKTPYSNYVFLLNPNDKKDY
                     KVVSVYCDKDFKKRIYCSVNDAFRFYAR"
     gene            complement(4324..5442)
                     /gene="truD"
                     /locus_tag="RJ336_001459"
     CDS             complement(4324..5442)
                     /gene="truD"
                     /locus_tag="RJ336_001459"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDZ5213892.1"
                     /translation="MNLVEENTIFKPLYSLKHSPINAYFSKNSDDFVVRERPLYEFSG
                     KGEHLILHINKKDLTTNEALKILSEASGVKIRDFGYAGLKDKQGSTFQYLSMPKKFES
                     FLSNFSHPKLKILEIFTHENKLRIGHLKGNSFFIRLKKVLPSDALKLEQALMNLDKQG
                     FANYFGYQRFGKFGDNYKEGLEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELS
                     HFANDFSEKELIQIYKISKEEAKELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAEL
                     GRFKARAISAMGLLIGAKAYETGEGLALNLENEIFKDTLEFKAKMQGSRRFMWGYLEE
                     LKWRYDKEKAHFCIEFFLQKGSYATVVLEEILHKNLFE"
     gene            complement(5411..6232)
                     /locus_tag="RJ336_001460"
     CDS             complement(5411..6232)
                     /locus_tag="RJ336_001460"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDZ5213893.1"
                     /translation="MNKEDFIIKAFLNEKNGDDGAIIDDWCFSKDLFFENVHFKREWF
                     SLEQIATKAMLVNISDAISMNAVPKYALLGLALPKNLSENEIKALQKGFLKTARKFNI
                     KIIGGDTISNDKIDISLTIISKINDKAVFRKGLKKGHLLAYTGKLGRSLKGLEILQNG
                     GTLRPNHVFIKPKLRASFFYEVAPLISCAMDISDGLSKDLSRLLALNKCGISWFKKLD
                     DYTLYSGEEYEILFAFDEKERQNIKTIAKKHGVKLNIFGKAVKGKYEFSGREHHF"
BASE COUNT         2097 a         1169 c          806 g         2198 t
ORIGIN      
        1 tttttacttt gcactttggc tttattctta ccttttatca atatttttgt atattatctt
       61 gctttttatt atctctttca caaactttta atgattgatg ttacaagcac gattttagac
      121 aaagaaagtt ttaaaaattt tcattctgat ttttcgcctt tagagtttaa atttagcact
      181 ctttgttttt atctactctc atcagtacca cttttaggac tttttttgca agtgtttttt
      241 gtgatttttc tcacacattt agcctatcaa agaattttaa aactaaaagc taaggcttga
      301 aatatcgatt ttatgattat acaaataagc ccttaaaagt cttggaattt tagctattct
      361 gcactcttct ttaaaatttt taggtaattt ttgacaagtt tcatactcaa aaacaatagc
      421 ttgttcattt ttatatacaa gtgctatttt accacctaaa acacaatcac cctttaaaag
      481 ctcctttctt tgtgccgtac ttaaaagtaa acctttcatt ttcaccgctc tagcgatcaa
      541 gctttcattt ttagggcaaa taagaagtcc ttgaatttct ttgatatttt caaaatcata
      601 aagttttttc ctatctttat caagataaga aaaacttctt tttaaaccct gatgaaattt
      661 actcacaaag gcattagaga aattttttct tatataattt ctaaaatatt tttcattttc
      721 attactttca tcatagaaat aaaaaatatc tttttctttt aaaaaagatg aaatttcatc
      781 tttacttata aagagtaaag ggcgtaaaag tgtataattt gagcgttttt cgcactcttg
      841 catacctaaa atttcagcca aacctgctcc tcgtgaaagt tgcatcaaaa accattcaaa
      901 ctgatcgttt aaatgatggg ctaagataag atgatcataa tcttgctcaa gacaaatttt
      961 ttcaaaaaaa tcatagcgaa aatctctggc ttttttttca aaattacttt gaaatttagg
     1021 agcgtgtttt ataaaaattt ttttatgaaa tttcaaagca agttctttag cttttaactc
     1081 ttctaaatca ctattttttc tagttttata atttatcatc acaagatcaa agtcgatctt
     1141 ttcttgcatt aaaagataaa aaagcgcact agaatcactt ccataagaaa aagcgagtaa
     1201 atttttaccc ctttttaaaa gggctaaaat ttcatcttta atttgcatct acttttctta
     1261 aagccttagc aaggagcttt ttatcaaggt tttgtaaaat ttcacattca taaatttgcc
     1321 ccatttctaa atttccacat tcgctttcat tgataagaat ttccccatca atctctctat
     1381 cccatcttag atctttagct gcgatgaaaa actctccctc gctactttct cctgtgcaaa
     1441 ctaccaaacg cttttgccct acttcttttt caaaactttt ttctatcact tcatcaacaa
     1501 ttttttctat gattttaagc cttttattga tcgctttaaa aggcacttgc tccatatcaa
     1561 aagcagccgt atcttcttcc ttagaatacg caaaaacgct cactctatca aaaccaaagt
     1621 ctttaacaaa ctcacaaagc tcttcaaaat ccgcctcact ctcacctgga tgtcctacga
     1681 taaagcccgt gcgtaaaaaa ctatttggcg cacttttcat taaatttagc atttctttaa
     1741 gtcttgtgct atttgcccca cgcttcatga ttttaagcat attatcactt atgtgctgta
     1801 aaggcatatc aaaataattt acaaaaattt cagaagctat aatgcgtttg atcaaagctt
     1861 cactcgcact cgtaggataa agatataaaa ttctagccgc tcttatgcct ttgatttttt
     1921 ccacctcatc gattaagcgt ataagcccat ctttttcacc tttatcgaac aaataagaac
     1981 tcgtatcttg tgcaataaaa gaaaaatcct tataacctct agctaccaaa tctttaagct
     2041 cagctataat gctacttatt tcgcgagatt ttaacttgcc tttaaaactt gggatggcac
     2101 aaaaagagca tttttgatta caaccctcgg cgatttttat aaaagcatga gaatttgaac
     2161 ctgtgataat gcgtttggaa ttttcactct gcaaataagt cgaatttgaa aataaatttg
     2221 tttttttgag tatcatttca tcgattcttt cataatcacc cacacctgtg aaaagatcaa
     2281 cctcaggaag ttctttcata agctcctcac gataacgctg catcaaacaa cccgtaacca
     2341 ccaaaagaga atcttttttt ctttgttcgt gcaaatccaa aatcgcatta atgctttctt
     2401 tttttgcact gtcgataaaa ccacaggtat ttacgattaa aacatcggct ttgcttggct
     2461 catcgcaaag ctcataagca ctaaggcgcc ctagcatgat ctcactatcg actaaatttt
     2521 tattacaacc taaagacata agataaagtt ttgacatttt tttcctatat taaagttttc
     2581 ttttgatata atttttgact ttaaaaatat aattatagca aagaaatttt atggataatt
     2641 acgaatttag cgaactttta aaaactttaa aaaacaaagt cggcaacata gcctccatca
     2701 tcaagcctga aaatatccaa acaaggctta aagaaatcga agagcttgaa aattctcctt
     2761 ctttttggag cgatgtaaaa caagcaggga tcataggcaa agaaaaaacc aaaatcacca
     2821 atctacttaa aaactatgaa aatgctttta atgccctaaa tgacgcaagc gaactttttg
     2881 atctggctaa tagcgaaaac gatacagaaa cgcttgaagc tttatttaat gacgcaccaa
     2941 aacttgaaga taccatcaca agtcttgaaa tttccatgct tttaagcgga gaaaatgatg
     3001 gtaaaaatgc tattgtttcc attcacccag gtgcgggtgg aacggaaagt aatgactggg
     3061 caagcatact ttatagaatg tatttaagat tttgtgaaag agaaggtttt aaagtcgaaa
     3121 ctttagactt tcaagaaggc gaagaagcag gacttaaaga tgtgagcttt ttagttaaag
     3181 gagaaaatgc ttatggttat ttaaaagctg aaaatggtat ccatcgtttg gtaagaactt
     3241 ctccttttga tagtgcagga cgccgccata caagcttttc aagtgttatg gtaagccctg
     3301 aacttgatga tgatatagaa attgaaatcg aagaaaaaga cataagaata gattattaca
     3361 gagcaagtgg tgcaggcgga caacatgtca ataaaacaga atcggctgtg agaatcacgc
     3421 attttccaac cggcatagtt gtacaatgcc aaaatgacag aagtcagcac aaaaacaaag
     3481 ccaccgcttt taaaatgcta aaatctcgcc tttatgaact tgaactcatg aaacaacaag
     3541 atagtgctaa tgccggagaa aaaagcgaga taggctgggg gcatcaaatc cgctcttatg
     3601 tacttttccc ttatcagcaa gtcaaagaca atcgcagcgg agaagctttt tctcaagtgg
     3661 ataatatcct tgatggagat atcaaaaaaa tgatagaagg cgttttaatt gccttaaaag
     3721 cggagtaaca ggcttaaaaa taagtaattt ctgcaaaatg tcggtataaa aagaattaga
     3781 aagatagcgg gactttcccg cttgttttat tatcttgcat aaaacctaaa agcatcattc
     3841 acagaacaat aaattctttt cttaaagtct ttatcgcaat aaacactcac aactttatag
     3901 tcttttttat cgtttggatt taataagaaa acatagtttg agtatggagt tttatctatt
     3961 tctaaatcac gcttcatttc tttgatttta ccttctggat ctttaatatc actaattgct
     4021 ctgactgaag tataatcata aagcttataa tttggatatt ttttcataat ctcttgatta
     4081 cctaaatcaa acatagcttg atcgttgcca ttgttcttta actcgactaa atcgccatcg
     4141 ccacaaccca caatcaaagt catagctcct aaagccaaag cacttgttaa aatctttttc
     4201 attatttttg ctcctagttt taaaattaaa ttaatataac tatacctaaa tttaaaattt
     4261 aaatatcatt tttgcaataa attctaaagt aaaaatcacg taaaaattta actcataatt
     4321 atttcattca aacaaatttt tatgcaaaat ttcttctaaa accacagtag cataagagcc
     4381 tttttgcaag aaaaactcta tacaaaaatg ggctttttct ttatcataac gccattttaa
     4441 ctcttctaaa tatccccaca taaagcgtct tgaaccttgc attttagcct taaactccaa
     4501 agtatcttta aaaatttcat tttctaaatt taaggccaaa ccttctcctg tttcataagc
     4561 cttagcaccg attaaaagcc ccatagcgct tatagctctt gccttaaaac gcccaagctc
     4621 agcacttaaa tcctcacata aaaaacactt tccaaaagga taatgcccta aaacctcacc
     4681 ttttaaaagc ttaaaaaatt gttcttgttt tttaagttcc ttagcttctt ctttggagat
     4741 tttataaatt tggatcaatt ctttttcgct aaaatcattt gcaaaatgtg ataactccac
     4801 tcttttactc aaatagcgat taaaaagctc actttgaaaa gctgaaatta aaaactcttt
     4861 catttttaca tttttcatct ttttaccacg caaaatttca agcccttctt tataattatc
     4921 cccaaatttt ccaaaacgct gataaccaaa ataattcgcg aaaccttgtt tatccaaatt
     4981 catcaaagct tgttctagtt ttaaagcatc gcttggtaaa acttttttta agcgtatgaa
     5041 aaaagaattt ccttttaaat ggcctattct tagcttgttc tcatgggtaa aaatttctaa
     5101 aattttaagt ttaggatgag aaaaatttga taaaaaactc tcaaattttt taggcataga
     5161 aaggtattga aaggttgatc cttgcttgtc tttaagccct gcataaccaa aatctcttat
     5221 tttaacccca cttgcttcac ttaaaatttt taaagcttca tttgtggtta aatctttttt
     5281 attgatatgc aaaataagat gctcaccctt accactaaat tcatacaaag gcctttcacg
     5341 cactacaaaa tcatcgctat ttttactaaa atacgcatta ataggactgt gttttaaact
     5401 atacaaaggc ttaaaaatgg tgttctcttc cactaaattc atattttcct ttcactgctt
     5461 ttccaaagat atttaatttc acgccgtgtt ttttggctat tgtttttata ttttgacgct
     5521 ctttttcatc aaaagcaaac aaaatttcat attcttctcc gctataaagc gtataatcat
     5581 caagtttttt aaaccaagaa ataccgcatt tatttaaggc taaaagtctt gataaatcct
     5641 tgcttaaacc atctgaaata tccatagcac aagaaattaa aggtgcgact tcataaaaaa
     5701 aactagctct taattttggc tttataaata catggtttgg tcttaaagtg cccccatttt
     5761 gtaaaatttc aagccctttt aaacttcgtc ctaattttcc cgtataagca agtaaatgcc
     5821 ccttttttaa accttttcta aaaacagctt tatcattaat ctttgaaatg atagtaagac
     5881 taatgtctat tttatcattg cttatagtat caccgcctat gatttttata ttaaatttcc
     5941 tagctgtttt taaaaaacct ttttgcaagg ctttgatctc attttcgctt aaattttttg
     6001 gtaaagcaag tcctaaaagt gcgtattttg gtacagcatt cattgaaata gcatctgaga
     6061 tattaacaag catggctttt gtagcaattt gctctaagct aaaccactct cttttaaaat
     6121 gcacattttc aaaaaacaaa tccttactaa aacaccaatc atcaataata gctccatcat
     6181 cgccattttt ttcatttaaa aaagctttga taataaaatc ttctttgttc ataatgcgtg
     6241 attttataaa atttcctttt aaattctagt
//
LOCUS       DAPWGO010000082         6236 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.084, whole genome shotgun sequence.
ACCESSION   DAPWGO010000082 DAPWGO010000000
VERSION     DAPWGO010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6236)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6236)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6236
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.084"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..284)
                     /locus_tag="RJ336_001461"
     CDS             complement(<1..284)
                     /locus_tag="RJ336_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213894.1"
                     /translation="MSLLKNSSYILTLLSLFGFLLTWQRTVFSLFFLIPIFLTLFWEF
                     FLFLKLRKNIIKEATLIKGSLFYRISMGDFYLYIFSFFLAIFGLISLFLN"
     gene            complement(265..2208)
                     /gene="ligA"
                     /locus_tag="RJ336_001462"
     CDS             complement(265..2208)
                     /gene="ligA"
                     /locus_tag="RJ336_001462"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDZ5213895.1"
                     /translation="MKKEEYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRAFE
                     EQNKDEISKDSPTQKIAPTIQSEFKKIAHLKRMWSMEDVFDESEFRAWAKRAKCEKNF
                     FIEPKFDGASLNLLYENGKLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIR
                     GEVVILKDDFEKINEKRALLNQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGLGE
                     NTLNFTKHSEVMQFIRELGFLKDDFVRLCVNLDEVLKAYDELLALREKKPMMMDGMVV
                     RIDDLALCEELGYTVKFPKFMAAFKFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVN
                     LDGVVVKSATLHNFDEIARLDVKINDFVSVIRSGDVIPKITKVFKDRREGLEMEISRP
                     KLCPTCQSELLDEGTLIKCQNIDCEDRLVNSIIHFVSKKCLNIDGLGENIVELLYKHK
                     KITTLESIFHLKFSDFEGLEGFKEKKINNLLNAIEQARECELFRFITALGIEHIGEVA
                     AKKLSLSFGKEWHKQSFEAYANLEGFGEQMALSLCEFTRVNRTRIDEFYKLLNLKIEK
                     LEIKSDGVIFGKTFVITGTLSRSRDEFKALIEKLGGKVSGSVSKKTDYVLFGEEAGSK
                     LIKAKELEIKCIDESAFNELVKE"
     gene            complement(2209..3351)
                     /gene="folP"
                     /locus_tag="RJ336_001463"
     CDS             complement(2209..3351)
                     /gene="folP"
                     /locus_tag="RJ336_001463"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDZ5213896.1"
                     /translation="MKFFKINPNTDFNLLCSFINPHKMGQKIMSEKTKIHFIFIKDIS
                     TPAANILKQDALRVGAELITHKEVITAKITHSNVLLMASKEQIQKLIVKEKLQDFGLK
                     NLALFLQKDFLKPKKAELMAVINVNEDSFNAKSRVSEEDFEKRLNDFLALKPEYIDIG
                     AVSSRPGSEYCGKEEEFKRLKKVLDLIYEKNYYEQAIFSLDSFDEYCLEYALNKGFKL
                     INDITSLRNLNLAKLASKYEAKYCLMHMQNNPNNMQDNPFYEDLLDEMTLFFKEKLEL
                     LESFGVKESILDVGIGFGKSAGHNMILIKHLEHFLQFNKPLLIGASRKSVINAYFQSE
                     IKDRLAGTLYLHLKAFENGASVIRVHDLYEHKQLFALAQAMDNIGV"
     gene            complement(3353..3952)
                     /locus_tag="RJ336_001464"
     CDS             complement(3353..3952)
                     /locus_tag="RJ336_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDZ5213897.1"
                     /translation="MFISKIIISEDFLGIKEEMINNFGIKKLRFFMPQNEFLLDDARA
                     VEKESYIAETEEKIIVLMADSYRIEAQNFLLKLLEEPPKNIKFLIVIPSKNLLLPTIK
                     SRLICEKRKVEKEVKKLDLDLKRMDLRMLFDFLQKNENLDKNELMDQIALLAKECVKY
                     KDFNAEELEFFYESYELAKLNSKSGVLLATLLLNYYTKK"
     gene            complement(3958..4494)
                     /locus_tag="RJ336_001465"
     CDS             complement(3958..4494)
                     /locus_tag="RJ336_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HobA family DNA replication regulator"
                     /protein_id="HDZ5213898.1"
                     /translation="MSDFLSFTLENIRNGGAFMAWLESRRLEWAPLMAARLKYLLEGR
                     TFVLMCDEQRSWYEEYFLKNINSKAARPMLPFVSLNSLCKKKVQSSEDIALLNDLLDI
                     SFPNGYVYFYIGSAFDNKSLIAKSRDDSLLWLFDEQLQDSFYLNSKDKDLDIKLISLY
                     QLFDVSLDAILFSRVQLG"
     gene            complement(4495..5697)
                     /locus_tag="RJ336_001466"
     CDS             complement(4495..5697)
                     /locus_tag="RJ336_001466"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HDZ5213899.1"
                     /translation="MLIVQKYGGTSVGTLERIEAVANRVIQSAQQGNQLVVVVSAMSG
                     VTNTLIEQAEYFSKTPNGKDMDMLLSSGERVTSALLSIALNEKGYPAISFSGRKAGII
                     TDSVFTKARIHHIDTKAIKSELQNGKIVVIAGFQGVDEEGNVTTLGRGGSDLSAVAVA
                     GALNADLCEIYTDVDGVYTTDPRIEPKAKKLDKISYEEMLELASLGAKVLQNRSVELA
                     KKLNVNLVTRSSFNNNEGTMITKEDGMEQALVSGIALDKNQARVTLRNVEDKPGIAAE
                     IFSVLANENINVDMIIQNVGVDGATNLGFTVPQNELELAKNAMQKILSSKTTIESDSA
                     VVKVSIVGVGMKSHSGVASKAFKALADEGINIGMISTSEIKISMIVHEKYGELAVRAL
                     HECYGLDK"
     gene            complement(5699..6169)
                     /locus_tag="RJ336_001467"
     CDS             complement(5699..6169)
                     /locus_tag="RJ336_001467"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDZ5213900.1"
                     /translation="MENEKNYRPNVAAIVLSSSYPFECKIFIAKRSDMDNIWQFPQGG
                     IDKGESVKNALFRELKEEIGTDEVEIIAEYPEWLSYDFPSKIVKKMYPYDGQIQKYFL
                     VRLKHGATININTKHPEFDDYQFVSVKQIFEMINHFKKNIYVKVIKYFEEKGYI"
BASE COUNT         2071 a         1243 c          704 g         2218 t
ORIGIN      
        1 aaatttaaaa ataaagaaat aagtccaaaa atcgccaaga aaaaactaaa aatataaaga
       61 taaaaatccc ccatactaat acgataaaac aaacttccct taatcaaagt agcttctttt
      121 ataatatttt ttctaagctt taaaaataaa aagaattccc aaaaaagtgt taaaaaaata
      181 ggaattaaaa aaaataaaga aaaaacagtc ctttgccaag ttagtaaaaa gccaaaaagg
      241 cttaaaagcg ttaaaatata agaactattc tttaacaagc tcattaaaag cactttcatc
      301 tatacatttt atttcaagct ctttagcctt aatcagctta gaacctgcct cttctccaaa
      361 aagcacatag tcagtctttt tagaaactga gccacttacc ttacccccaa gcttttctat
      421 caaagcctta aactcatctc ttgagcgtga aagagtacct gtaattacaa aagttttacc
      481 aaaaatcaca ccatcgcttt tgatttcaag tttttctatt ttcaaattta aaagcttgta
      541 aaactcatca attcttgtac gattaacacg cgtaaattcg caaagactta aagccatttg
      601 ctctccaaaa ccttctaaat tggcataagc ttcaaagctt tgcttgtgcc actctttacc
      661 aaaacttaaa cttaattttt tagccgcaac ctcgccaata tgctctatcc ctaaagctgt
      721 gataaaacga aaaagctcac attctcttgc ttgttctata gcatttaaaa gattgttaat
      781 tttcttttcc ttaaagcctt ccaaaccttc aaaatcacta aattttaaat gaaaaatgct
      841 ctcaagcgta gtgatttttt tgtgtttgta taaaagctct actatatttt ctccaagccc
      901 gtcgatatta agacattttt tagaaacaaa atgaatgata gaatttacaa gtctatcctc
      961 acaatctata ttttgacatt ttattaaagt tccttcatct aaaagctcac tttggcaagt
     1021 aggacaaagc ttagggcgtg aaatttccat ctctaaacct tctctacgat ctttaaaaac
     1081 cttagtgatt ttagggataa catcgccact tcttatcacg cttacaaaat cattgatttt
     1141 aacatcaagt cttgcaatct catcaaaatt atggagtgtg gctgatttta ctacaacccc
     1201 atctaaattt acaggttcta aaaccgccac aggagtgatc actccacttc ttcccacttg
     1261 taaatttacg cctattaaac gcgtggtttt ttcaagtgca ggaaatttaa aagctgccat
     1321 aaattttgga aattttaccg tatagcctaa ttcttcacaa agtgcaagat catcaattct
     1381 taccaccata ccatccatca tcataggctt tttttctctt aaagctaaaa gctcatcata
     1441 agcttttaaa acctcgtcta aattaacaca aagtcttaca aaatcatctt ttaaaaaacc
     1501 gagctctctg ataaattgca tcacctcact gtgtttagta aaatttaagg tattttcccc
     1561 tagtccccaa ggataaaatt tcaaattcct ttctttggtg atgcttgtat caagctgcct
     1621 taaactccca cttgcagcat tgcgtggatt ggcaaataaa ctttgattta aaagggctct
     1681 tttttcgttg attttctcaa aatcatcttt taaaatcacc acttctccac gaatttctat
     1741 cctttcttta taggctatat ttttaggtat attttctatc tcaaaaacat taagcgttat
     1801 atcctcaccc acttcgccat cgcccctagt ggcaccgctt actaatttac cattttcata
     1861 aagcaaattt aaactcgctc catcaaattt aggctctata aaaaagtttt tttcacattt
     1921 tgcgcgtttt gcccaagccc taaactcact ctcatcaaac acatcttcca tcgaccacat
     1981 acgctttaaa tgagctattt ttttaaactc gctttgtata gtaggagcta ttttttgcgt
     2041 tggagagtct tttgaaattt catctttatt ttgttcttca aaagctctta attctctgat
     2101 taaagcatcg tattcttcat cgctagccaa gggttcatct ttttcataat atgccctcat
     2161 ccacaaattt gctaaagcaa ctttttctaa atactcttct tttttcatct aaactcctat
     2221 attatccatt gcctgtgcta aagcaaaaag ttgtttgtgc tcatataaat catgcactct
     2281 tataacacta gcaccatttt caaaagcctt taaatgcaaa tacaaagttc ctgctaaacg
     2341 atctttaatc tcgctttgaa aatacgcatt aatcacactt ttgcgactcg cacctataag
     2401 caaaggctta ttaaattgta aaaaatgttc taagtgtttg attaaaatca tattatggcc
     2461 cgcactcttt ccaaaaccaa tacctacatc taaaatactt tcttttactc caaaactttc
     2521 taaaagctca agtttttctt taaaaaacaa agtcatctca tcaagcaaat cttcataaaa
     2581 aggattatct tgcatgttat ttggattgtt ttgcatgtgc attaagcaat attttgcctc
     2641 atacttactt gcaagtttgg ctagattaag atttcttaaa cttgtaatat cattaatgag
     2701 tttaaaaccc ttatttaaag catattctag acaatattca tcaaaactat ctaaactaaa
     2761 aattgcttgt tcgtaataat ttttctcata aattaagtca agtacttttt tcagtctttt
     2821 aaattcctct tccttaccac aatactcact cccaggtctt gaactaaccg cacctatatc
     2881 gatatattca ggctttaaag caagaaagtc attaagtctt ttttcaaagt cttcttcact
     2941 cacacgactt tttgcattaa aactgtcttc attaacatta atcactgcca taagctcggc
     3001 ttttttcggt tttaaaaaat ctttttgcaa aaaaagagcc aaatttttaa gtccaaaatc
     3061 ttgaagtttt tctttgacaa taagcttttg aatttgctct ttacttgcca ttaaaagcac
     3121 atttgaatga gtgatttttg cagtaattac ttctttatga gtaataagtt cagctcctac
     3181 tcttaaagca tcttgtttta aaatatttgc cgcaggagta gaaatatctt tgataaaaat
     3241 aaaatgaatt tttgtttttt cactcataat cttttgtccc attttatgag ggtttatgaa
     3301 agaacaaagc aaattaaaat cggtgtttgg attgatttta aaaaatttca ttttatttct
     3361 ttgtatagta atttagcaaa agagtagcta aaagcacccc gcttttagaa tttaattttg
     3421 caagctcata actttcataa aaaaactcta attcttcagc attaaaatct ttatatttca
     3481 cacattcttt agcaagcaat gcgatttgat ccataagttc atttttatcc aaattttcat
     3541 ttttttgcaa aaaatcaaaa agcattctta aatccattct tttaagatct aaatcaagtt
     3601 ttttaacttc cttttcaact tttctttttt cacaaataag acgtgatttt atagtaggta
     3661 aaagtaaatt tttagaaggt atcacaataa gaaatttaat attttttgga ggttcttcaa
     3721 gaagtttaag taaaaaattt tgtgcttcta tcctataaga atccgccatt aaaacaataa
     3781 ttttttcttc ggtttctgcg atatagcttt ctttttcaac tgctcttgca tcatcaagta
     3841 aaaattcatt ttgtggcata aaaaatctta attttttaat accaaaatta ttaatcattt
     3901 cttctttaat acctaaaaaa tcttcactga taataatctt actaataaac aaaatattta
     3961 tcctaattgc accctggaaa ataatattgc atccaaactt acatcaaaaa gttgatataa
     4021 actaataagc ttgatatcca agtctttatc tttagaattt aaataaaaac tatcttgtaa
     4081 ctgctcatca aaaagccaca ataaactatc atctcttgat ttagcgatta aagatttatt
     4141 atcaaaagca cttcctatat aaaaatacac ataaccatta ggaaaagaaa tgtcaagcaa
     4201 gtcattaagt aaagctatat cttctgaact ttgtactttc ttcttgcata aagaatttaa
     4261 cgacacaaaa ggaagcatgg gacgagcggc ttttgaattt atatttttta aaaaatactc
     4321 ttcataccaa gatctttgtt catcgcacat taagacaaaa gtgcgtccct ctaaaagata
     4381 tttaagtctt gcagccatca aaggagccca ttctaaacga cgcgactcca accatgccat
     4441 aaaagctccg ccattgcgaa tattttcaag agtaaaactt aaaaaatcac tcatttattt
     4501 atcaagtccg tagcactcat gtagtgctct aactgcaagt tctccgtatt tttcatgaac
     4561 tatcattgaa atttttattt cactagtaga aatcataccg atattaatcc cctcatcagc
     4621 taaagcttta aaagctttac ttgccactcc tgaatgtgat ttcatgccta cgccgactat
     4681 agaaactttt actacagcac tatcactttc tatagttgtt tttgagctta aaattttttg
     4741 catagcattt ttagctaatt caagttcatt ctgaggaacc gtaaaaccca aatttgtagc
     4801 gccatcaact ccaacatttt gtataatcat atctacatta atattttcat ttgctaaaac
     4861 agaaaaaatt tcagctgcga ttccaggctt atcttctaca tttcttaaag ttactcttgc
     4921 ttgattttta tccaaagcaa taccacttac taaagcttgt tccattccat cttcctttgt
     4981 tatcattgtt ccttcgttat tgttaaaact acttctagtt actaagttaa catttaattt
     5041 ttttgcaagc tctacagagc gattttgcaa aacttttgca cccaaacttg caagttcaag
     5101 catttcttca taagaaattt tatccaattt ctttgccttt ggttcaattc ttggatctgt
     5161 tgtataaacc ccatcaacat cggtataaat ttcacacaaa tccgcattta aggcacctgc
     5221 taccgccaca gcacttaagt cgcttccacc acgccctaag gtagttacat taccttcctc
     5281 atctacacct tgaaaacctg ctataacgac tattttacca ttttgaagtt ctgattttat
     5341 cgcttttgta tcaatatgat gaattcttgc ctttgtaaaa acactatctg taataattcc
     5401 cgcttttctc ccagaaaatg atatagcagg ataacccttt tcatttaaag caatagaaag
     5461 taaagcactt gttacacgct ctccactgct taaaagcata tccatatctt taccattagg
     5521 agttttacta aaatattcag cttgctcaat aagagtattt gtcaccccac tcattgcaga
     5581 tactacaaca acaagttgat taccctgttg cgcactttgg ataaccctat tggctactgc
     5641 ttcaatacgc tcaagtgttc caacgcttgt tccaccatat ttttgaacta taagcatttt
     5701 agatataacc tttctcttca aaatatttga tcactttaac ataaatattt tttttgaaat
     5761 gattaatcat ttcaaaaatt tgtttaacac tcacaaattg ataatcatca aattcaggat
     5821 gtttggtatt gatattgatt gtagcaccgt gctttaaacg cactaaaaaa tatttttgaa
     5881 tctgcccatc ataaggatac atttttttaa caattttact cggaaaatca taactcaacc
     5941 attctggata ctcagcaatg atttcaacct catcagtacc tatttcttct tttagttctc
     6001 taaataaagc gtttttgaca ctttcacctt tatcaatacc tccttgtgga aattgccaaa
     6061 tattatccat atcacttctt ttagctataa aaatcttaca ctcaaaagga taagaacttg
     6121 ataaaacaat agctgcaaca tttggtctat aatttttctc gttttccaca atatttttcc
     6181 ttaatttcaa ggatataatt ttaacctaaa tcaaatcaaa tttttattaa aataca
//
LOCUS       DAPWGO010000083         5951 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.085, whole genome shotgun sequence.
ACCESSION   DAPWGO010000083 DAPWGO010000000
VERSION     DAPWGO010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5951)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5951)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5951
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.085"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            41..805
                     /locus_tag="RJ336_001468"
     CDS             41..805
                     /locus_tag="RJ336_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HDZ5213901.1"
                     /translation="MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALNIQDNNTQH
                     KNDLKQILVKLFQYIKIHFKDEEKFMESIDFPLIEEHKKSHQILVEKTKELLEHSNDI
                     VKMSQELSILTKDWILDHFANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRA
                     EKTHDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNA
                     TFEDALQNHHFTTQKNDMGGGIDEFSSKNLRNFQSF"
     gene            762..2633
                     /locus_tag="RJ336_001469"
     CDS             762..2633
                     /locus_tag="RJ336_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HDZ5213902.1"
                     /translation="MNFQVKTLETFNPFESLNHEQANTEQILDFRVIDFKLLCSSVKP
                     AKTKTYERKDFDLFYADDFFVKNYNTIVQKFLIEIYPKTQSFPFTVKLRSNSNLTHLK
                     ASINLTENFKYYPNLKFDILQNIYKIMIKQKFLILRLDKNLFDKIDDFILSIQKSPSI
                     KEIELEIAKGVDKIEHKSDEIIYHRDVNEECFDENINYDEGNYCKPIEKNELLFEYIY
                     RILGKEGRNLRGEILHLNPIAFLDNPFIIKDESIYTEELEDRIKYFSANYGFLNKDHT
                     GYCIANNLKLSQIGLKTTGSIKTNTDENINLEITNFDISDDAIKSGIVNVQASNIKVN
                     GNVGATKLYGKNISIKGLTHAKSEIFAQDIFITTHKGTLQADTVYIKNLENGTIIAKN
                     VFVENCMGGKIEAENIYICNLLTDNTLYPRKNLIITNNIKFKNNIVVSPLVSIENNSD
                     TECENLKNLSLKIKSKLDDTISKMQNYYDYLIKNQIKIIKLQKTKNPSAIEMKFSNLY
                     HDIIKKYNHLSISYKKLVKLKYQIDAKLNFLNEMVYNVKIYIKAENIGEDNFLKFYPN
                     TNTNLELKHHINLKDYEKVLYLEKGQQVSYIKSSHNYSESDIEEIKIIFEKLEKDNS"
     gene            complement(2637..4274)
                     /locus_tag="RJ336_001470"
     CDS             complement(2637..4274)
                     /locus_tag="RJ336_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDZ5213903.1"
                     /translation="MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDI
                     FYTTITTQSTNPAQGGYGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGN
                     AYYTRNGSFRRDANGYLVDSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNN
                     GFTVNSNNSFSIGTTASQGAIKVPVNMYLPPQVTQNVKWSGSLNTNTTTEVVKVDLDP
                     SKFNITKTEDGKYVVSGSVSKEDVFSAKAGDRIILNFTDDNGVKTSFEATLDENLNFK
                     SNELDLKGLDENSIKLDTAQISTEQQKANKDILESPIYNADGSKSTLRVTLERVLPQE
                     GDNIQYKAIAQIYDSNGNAVGNPTEGNMVFDKNGALLQNNITSIANPNGGTINIDLGS
                     PYDANKPGSGYSGIYIKEGVEKNVVTQQDGVAEGFFEQYNISDDGSIVAQFSNGKNAI
                     VGKLALYNFINEQGLVAMGDNIFAATANSGDASFIMKDGQVVNTAKFKGGFLEQSNVD
                     LSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR"
     gene            complement(4278..5162)
                     /locus_tag="RJ336_001471"
     CDS             complement(4278..5162)
                     /locus_tag="RJ336_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod modification protein"
                     /protein_id="HDZ5213904.1"
                     /translation="MISSSDWNLNTAATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNA
                     TLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQK
                     LSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYD
                     SNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANY
                     GTYPIEGVVFKDGVAYAKMAGQEVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSD
                     GDSSGSGSTEDGDKEEKA"
     gene            complement(5216..>5951)
                     /locus_tag="RJ336_001472"
     CDS             complement(5216..>5951)
                     /locus_tag="RJ336_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDZ5213905.1"
                     /translation="NKEIVKDTQNLVSNLTQKDFNLNKEPKNNNKENKDIKQNFFDQK
                     LNFENLNKTQVVQNKENNANFNNNTTNKETFTQEQTKTHSENVDKNSLDELNSLVKDL
                     NKVTQNNARNITPKETLQYFSQDLKEAVDQYKAPITKLSITLNPNNLGEVEVTLIQRG
                     NNLHINFNSNANAMNLFIQNQAEFKNSLVNMGFTGLEMNFSDQGKREQNQNQGKNRSG
                     YGFKDALDGKNESEKVNLELVLAKYF"
BASE COUNT         2140 a          990 c          797 g         2024 t
ORIGIN      
        1 aaatacgata taaaaataat ttatatcgca aggaaaaaat atgaaagtta aatggagtag
       61 agattttagc attaaaaata tgcaattaga caaacaacac gaactaattt ttgaaattac
      121 caatcttgca aatgatttag ctctaaacat tcaagataat aatacacaac acaaaaatga
      181 tttaaaacaa attcttgtaa agctatttca atacatcaaa attcatttta aagatgaaga
      241 aaaatttatg gaaagcattg attttccttt gattgaagaa cataaaaaat ctcatcaaat
      301 attagtagaa aaaactaaag agcttttaga acactcaaat gatattgtaa aaatgtctca
      361 agaactttcc atattaacca aagattggat tttagatcat tttgctaatg aagatttatg
      421 gatagctaat tttacaaaaa aaaccctaca ccttcaagaa atccattata ccttagaaca
      481 atacataaaa ctaaaatcaa tcaaacaaga cctaagggct gaaaaaactc atgattatat
      541 ttgcaattgt tctttgcgta tccatgcagt tccacagact atacatcaag agcttgttag
      601 caaagaaaat accttaaagt gcgaaaaatg tgggcaaatt ttagttcatt tggattattt
      661 tgatttgaat caaaatttcg aaaaattcaa tgctactttt gaagatgcac tacaaaatca
      721 ccatttcacg actcaaaaaa atgatatggg gggggggata gatgaatttt caagtaaaaa
      781 ccttagaaac tttcaatcct tttgaaagtt taaatcatga acaagcaaac acagaacaaa
      841 ttcttgattt tagagttata gattttaaac ttctgtgttc tagtgtaaaa ccagcaaaaa
      901 caaaaactta tgaaagaaag gattttgact tattttatgc agatgatttt tttgtaaaaa
      961 actacaatac catagtgcaa aaatttctta tagaaattta cccaaaaacc caaagttttc
     1021 cttttacagt caaacttaga tccaactcca acctaaccca tctaaaagcc agtatcaacc
     1081 ttacagaaaa ttttaaatat taccctaatt taaaatttga tattttgcaa aatatctaca
     1141 aaataatgat caaacaaaaa tttttaatct taagacttga taaaaattta tttgacaaga
     1201 ttgatgattt tatcttatca atacaaaaaa gtccatctat taaagaaata gagcttgaaa
     1261 ttgccaaagg tgtagataag attgaacata aaagtgatga aattatttat catagagatg
     1321 ttaacgaaga atgttttgac gaaaatatta actatgatga aggaaactac tgtaaaccta
     1381 ttgaaaaaaa tgagctactt tttgaataca tttatagaat tcttggaaaa gaaggacgaa
     1441 atttaagagg agagatactt catttaaatc caatagcctt tcttgataat ccttttatca
     1501 taaaagatga aagcatttac acagaagaat tagaagatag aattaaatat tttagcgcca
     1561 attatggatt tttaaacaaa gatcatacag gatattgtat cgcaaataat ttaaaattat
     1621 cacaaatagg gcttaaaaca accggttcaa tcaaaacaaa taccgatgaa aatataaact
     1681 tagaaatcac taattttgat ataagtgatg atgctattaa atcaggtatt gtaaatgttc
     1741 aagcttcaaa tataaaagta aatgggaatg ttggagcaac aaaactttat ggaaaaaata
     1801 tcagtatcaa aggcttaact catgcaaaaa gcgaaatttt tgcacaagat atttttatta
     1861 caacacacaa aggaactttg caagctgaca ctgtatatat aaaaaattta gaaaatggga
     1921 caattatagc taaaaatgta tttgttgaaa actgcatggg tggaaaaata gaagcagaaa
     1981 atatttatat ttgcaattta ctaacggata atactttata tccaagaaaa aatctaatca
     2041 taacaaacaa tataaaattc aaaaacaata tcgtagtttc accactagtt tctattgaaa
     2101 acaactcaga tacagaatgc gaaaatctta aaaatctaag ccttaaaata aaaagtaagc
     2161 ttgatgacac cataagcaaa atgcaaaatt actatgatta tctaatcaaa aatcaaatca
     2221 aaatcatcaa acttcaaaag actaaaaatc ctagcgccat agaaatgaaa ttttcaaatc
     2281 tttatcacga tatcataaaa aaatacaatc atcttagcat ttcgtataaa aaacttgtaa
     2341 aattaaaata tcaaattgat gcgaaattaa atttcttaaa tgaaatggtt tacaatgtaa
     2401 aaatatacat aaaagccgaa aatatcggag aggataattt tttaaaattt tatcctaaca
     2461 caaacaccaa ccttgaacta aaacatcata taaatttaaa agactatgaa aaggttttat
     2521 atcttgaaaa aggacagcaa gtaagttata ttaaatcaag ccataattat agcgaaagcg
     2581 acatagaaga aattaaaatt atttttgaaa aattagaaaa agataattcc taagaattat
     2641 cttttcatat taatggcttt ttgtatcatc tgatcacttg tagtgatact ttttgagctt
     2701 gcatcaaagg ctttttgagt tacgataagg tttgaaagct ctgcgcttaa atcaacattt
     2761 gattgttcta agaatccgcc tttaaattta gctgtattaa caacttgacc atctttcata
     2821 ataaaacttg catcaccgct atttgccgtt gctgcaaaaa tattatctcc catagcaact
     2881 aatccttgct cattgataaa attatataaa gcaagctttc caactatggc atttttacca
     2941 ttgctaaatt gcgcaacaat acttccatca tcggatatat tatattgttc aaaaaaccct
     3001 tcagctacac catcttgttg tgtaactaca tttttttcga cgccttcttt aatataaatc
     3061 ccactataac ccgaaccagg cttgttagca tcataaggag aacctaaatc aatattaatt
     3121 gttccaccat ttggatttgc aatgcttgta atattgtttt gaagcaaagc accattttta
     3181 tcaaaaacca tatttccttc agtcggattg cctacggcat tgccattaga atcataaatt
     3241 tgtgcaatag ctttatattg tatattatcg ccttcttgcg gtaaaactct ttcaagtgta
     3301 acccttaaag tgcttttact tccatctgca ttataaatag gggattctaa aatatcttta
     3361 ttggcttttt gttgctctgt tgaaatttga gctgtatcaa gcttgatgct attttcatcc
     3421 aatcctttta aatcaagctc gttactttta aaatttagat tttcatctaa agtcgcttca
     3481 aagcttgttt ttacgccatt atcatcagtg aaatttaaaa taatcctatc acccgcttta
     3541 gcactaaaca catcttcttt gctaacacta ccactaacta catattttcc atcttcagtt
     3601 tttgtaatgt taaatttact aggatcaaga tctactttaa ctacttctgt tgttgtgtta
     3661 gtatttaaac ttccactcca ttttacattt tgagttactt gaggaggtaa atacatattc
     3721 acaggtactt taatagcccc ttgagaagcg gttgtgccta tactgaaaga attatttgaa
     3781 tttacagtaa aaccattatt taccggagtt cctgtgttaa gataatcccc cataagccca
     3841 gcaactctat cgctatagtt aataccagta aaagcaggat tcattgttcc taaaacaaaa
     3901 tttccataag aatctaccaa atatccattg gcatctcttc taaatgatcc atttctagta
     3961 tagtaagcat tgccatcagc ccctaaaacc ccaaaaaatc cttttccttg caaagccaca
     4021 tcaaattcgc catcacttgc aacaggagaa ccctgttcga aaacaacttg agaagatgct
     4081 gcaccgctac cataaccacc ttgagcaggg ttggttgatt gggttgttat ggtagtataa
     4141 aaaatatctt taaattgagc atcagagtat ttaaagcccg tggtattgac atttgctatg
     4201 ttattagcag tgatatcaat accaaagcta ttgcttttta ctccagaaat cccattataa
     4261 aatgaattca tcatggctta tgccttttcc tctttgtcgc catcttctgt agatccagac
     4321 ccagaagaat ctccatcgct tgaaccacca cttgagtctc cacttgaacc gcttcctcca
     4381 gtagatgaag atgaaccaag cttataatct gttatttctt gtattgcatc aaaaggaact
     4441 tcttgtccag ccatttttgc ataggcaaca ccatctttaa aaacaacacc ttcgatagga
     4501 taagttccgt aatttgcagt gattttttca ccatttttat tattataaac cattttaaca
     4561 gtgtactcac catcacctgc ataaacccca tcgttatttc ttcctggcca ctccatagta
     4621 aataaacctt gagaaataga tttagcatcg cttttttcac tgaaaacaag tttattattg
     4681 ctatcataaa tttctagcgt aacaccgttt tcatcagaat cttcaggcaa atacatttta
     4741 agagcgataa gctcatctgc acctgtaagt ttgattttat tatctgaaac agttgccatt
     4801 ttaccaatag cccctaaagc tgaagtactc atacttgtac taaaagaatc agaaagcttt
     4861 tgcatagttt caaccatttt ttgcatagtt gtattggtat tttgctgcat ttcaagtgcg
     4921 ctaagctgcg aagtttgagt aagcatttta tcgctatcca taggatctgt tggatcttga
     4981 tgttgaagct ctatcaaaag aagttttaaa aacgcatcct tatctaaggt agcgtttgga
     5041 ttgctcacta ttcctgagct actgcttgaa tctgttctag ttgttccact agtacttcct
     5101 gaagaagtag tacctgaagt tgtagcagca gtatttaaat tccaatccga tgatgatatc
     5161 attataaact cctttttatt tagtttttta ttatttaagc aataagtgtt ccaacttaga
     5221 aatacttcgc taaaacaagc tctagattga ctttttcact ttcatttttt ccatctaaag
     5281 catctttaaa accatatcca ctacgatttt ttccttgatt ttgattttgc tctcttttgc
     5341 cttgatcact aaaattcatt tcaagtccag taaatcccat atttacaaga gaatttttaa
     5401 actcggcttg attttggata aacaaattca ttgcattggc attggagttg aaattgatat
     5461 gaaggttatt acctctttgt atcaaagtta cctccacttc tccaagatta ttaggattta
     5521 gagtgatact aagtttagta ataggcgctt tgtattgatc cacagcctct tttaaatctt
     5581 gtgaaaaata ctgcaaagtt tctttaggag tgatattgcg agcattgttt tgtgttactt
     5641 tatttaaatc tttaactaaa gaatttaact catctaagct atttttatct acattttcac
     5701 tgtgcgtttt tgtttgctct tgagtaaaag tttctttatt agtagtatta ttattaaaat
     5761 ttgcattatt ctctttgttt tgaactactt gagttttatt taaattttca aaatttaatt
     5821 tttgatcaaa gaaattttgt tttatatctt tattttcttt gttgttgttt ttaggctctt
     5881 tatttagatt aaaatctttt tgtgttaaat tggaaactaa attctgagta tctttgacaa
     5941 tttctttatt t
//
LOCUS       DAPWGO010000084         5920 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.086, whole genome shotgun sequence.
ACCESSION   DAPWGO010000084 DAPWGO010000000
VERSION     DAPWGO010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5920
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.086"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            69..764
                     /locus_tag="RJ336_001473"
     CDS             69..764
                     /locus_tag="RJ336_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDZ5213906.1"
                     /translation="MTQEELDALMNGDVDLDSETEAEVKTEESNTEEDALMLEDVKIA
                     DYKPNPSVVWPPPPPNQEHKVVHQLDDVTKDSELKATEMMDKLESINNFFADSESLLK
                     EINKAIEKNIDIFSKLNEKFPNVESFSEALELNNQAKKSSKQIVGNLQSGQDEVMMAM
                     DAMQYQDIHRQKIERVINVMRALSRYMSSLFEGKIDDKKRVSSAVHIEGDSTADVVSN
                     DDIEALIASLGQK"
     gene            761..2014
                     /locus_tag="RJ336_001474"
     CDS             761..2014
                     /locus_tag="RJ336_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDZ5213907.1"
                     /translation="MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREF
                     NYESFEEAIKYTHERGKKIYVTLNGFHLSSQIEGLKRHILKLREMKPDAFIVASVGAM
                     RLVKELAPEISLHVSTQANILNYLDAQVYKDMGAKRVVIARELGLKDAKALKENCDIE
                     LEAFVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEE
                     DENGTHVFNSKDLNLCSYIEKIMQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDAL
                     EGKFESSKYEKEIATLKNRGFTDGYLVSRPLEKTDTQNHNTSIEEGSHQVHAISEDGS
                     FFKCKGKIVLNTPYEILAPLGDVIQTCDNELGKIYQKEDRYFIEFKKLIAKNNKEFSE
                     IHSGNEHEIQLPNKISALSFLRKEI"
     gene            2015..2509
                     /gene="purE"
                     /locus_tag="RJ336_001475"
     CDS             2015..2509
                     /gene="purE"
                     /locus_tag="RJ336_001475"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDZ5213908.1"
                     /translation="MNFVSILMGSKSDYETMKEAAKTLESFGVKYELIISSAHRSPKR
                     TKEYIANAEEKGAKVFIAAAGMAAHLAGAVAAYTTKPVLGVPMPGSNLASMDSLFSTV
                     QMPSGIPVGTLAIGKAGAINAAYLAMQILAIYDVDLAQKLKEDRLEKEKKLVSDSKEV
                     EVLL"
     gene            2519..3055
                     /locus_tag="RJ336_001476"
     CDS             2519..3055
                     /locus_tag="RJ336_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3972 domain-containing protein"
                     /protein_id="HDZ5213909.1"
                     /translation="MQTYLELEEFCKLVHLNEDVVKGMMANGALNFKEEEGKIYIEAH
                     QGTFSVVPSSAKSQTAMVNSMTLAGESFVEKTIGTILNLHEKVLDAKDETLEALKNEN
                     KFLKDALYSMQELYDEDRKTIETLNNELKHAREEIEFLKRKYKLMWSKTAEIFGAKTE
                     PDLEMNKNLEKPIENMEQ"
     gene            3067..3930
                     /gene="glyQ"
                     /locus_tag="RJ336_001477"
     CDS             3067..3930
                     /gene="glyQ"
                     /locus_tag="RJ336_001477"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDZ5213910.1"
                     /translation="MTFSQMILNLQNYWQEQGCAIMQPYDMPAGAGTFHPATFLRSLG
                     KKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFD
                     LKSHDIRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYG
                     LERIAMYLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFE
                     NSYKECKNILEQGLALPAYDYCMLAAHTFNLLDARGAISVAQRQDYMLKIRELSKNCA
                     EIYKKNLNETE"
     gene            3917..4642
                     /locus_tag="RJ336_001478"
     CDS             3917..4642
                     /locus_tag="RJ336_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDZ5213911.1"
                     /translation="MKLSEIYNFLDQLSPFDIQESWDNSGILLGDRDSEISTVYLSLD
                     IDENIIKEASENSLIITHHPLIFKGLKDLYDKTYPRAFIKEMICKNISLISMHTNYDL
                     SHLNTYFTEEILGFKISFKDEFLIYVENSMSFEALCDWVKKKLNLQILRVSDCGKKDI
                     KRIAICTGSGGDLISKVDADCFLSGDFKYHQALEALSNQISLIDLGHFESERYFSQCL
                     AKDLKNLPLQAIITVSKNPFQYF"
     gene            4652..5368
                     /locus_tag="RJ336_001479"
     CDS             4652..5368
                     /locus_tag="RJ336_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HDZ5213912.1"
                     /translation="MNKYLEQLVLLSKIDQEIDSYEPKIDSINRTLKDAELKIGKINT
                     DLEKIDEEIKDIENQKVQNNAHISEFSAKIKELSKKSGAVKTEKEANALKIEEDIAKE
                     QLDAANDEIVRLDKILENKETYKKELEEEKIKQEQNINEIRVSIKSEMEVLEKDRMSV
                     YDKKTKLVGEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGE
                     EIVTCPHCGRILYKEQEEQN"
     gene            5365..>5920
                     /locus_tag="RJ336_001480"
     CDS             5365..>5920
                     /locus_tag="RJ336_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HDZ5213913.1"
                     /translation="MIFFYYFLTWTAFLFCAVFILLLSFLKSKYKTSLKSRFFLYKNL
                     HQEKADVHFHACSYGEVRSIKTLVLKFDSRITTITQTGFEYAKEFCKKVNYLAFENFL
                     PFWFKPCKVLVIFEAEYWLMLVFMAHIYKTKIILLNARISDKSYHSYQRFSFFYKKIF
                     SYIDEVFAQSELDKVRLESLGAKNV"
BASE COUNT         2191 a          678 c         1129 g         1922 t
ORIGIN      
        1 tgttttagat aaaattgatt ataattttga gcaattattg aaaatctaga tttaaaaaag
       61 ggaaaaaaat gactcaagaa gagcttgatg ctttgatgaa tggtgatgtt gatcttgatt
      121 cagagacaga agcagaggta aaaaccgaag aatcaaatac cgaagaagat gctttgatgt
      181 tagaagatgt caaaatagct gattacaaac ctaatcctag tgtagtatgg ccaccacccc
      241 caccaaatca ggagcataaa gttgtacatc agttagatga tgttacaaaa gatagcgagc
      301 ttaaagcaac ggaaatgatg gataagcttg aaagtattaa taattttttt gcggattctg
      361 aaagtttact caaagaaata aataaagcaa tagaaaaaaa tattgatatt ttttctaaac
      421 ttaatgaaaa atttcctaat gtggaaagtt tcagtgaagc tttagaatta aacaatcaag
      481 ctaaaaaaag ttctaagcag attgtcggaa atcttcaaag cggacaagat gaagtgatga
      541 tggcaatgga tgcaatgcag tatcaagata tacatcgtca aaaaatcgaa cgtgttatta
      601 atgtaatgcg tgctttaagc cgttatatga gttctttatt tgaaggtaaa attgatgata
      661 aaaaacgtgt aagttctgca gtgcatattg aaggtgatag tactgctgat gttgtaagta
      721 atgatgatat agaagcttta attgcaagtt tagggcaaaa atgatcattc ctgaaatagt
      781 agctcctgca ggaaatttca caaaattaaa aattgcttta gcttatggcg cagatgcggt
      841 ttatgcgggt gtgaataatt tttctttaag atcacgcact gcaagagaat ttaattatga
      901 aagttttgaa gaggctatca aatatactca tgagcgtggt aagaaaattt atgttacttt
      961 aaatggtttt catttgagtt ctcaaattga aggtttaaaa agacatattt taaaattgcg
     1021 tgagatgaag cctgatgctt ttatcgtagc ttctgttgga gctatgcgtc ttgttaaaga
     1081 acttgcacct gaaatttctt tacatgtttc tactcaggca aatattttaa attatttaga
     1141 tgctcaagtt tataaggata tgggtgctaa aagggttgta attgcgagag aattgggact
     1201 taaagatgct aaagctttaa aagaaaattg cgatattgaa cttgaagctt ttgtgcatgg
     1261 ttctatgtgt tttgcttatt cagggcgttg tttaataagc tctgtgcaaa gtggaagaat
     1321 gagcaatcgt ggatcttgtg caaatgattg cagatttaat tatgagcttt atgctaaaaa
     1381 tccagaaaat ggtactttat ttcgtttaga agaagatgaa aatggtactc atgtgtttaa
     1441 ttctaaggat ttaaatcttt gttcttatat agaaaaaatc atgcaagaaa attgtatcag
     1501 tgcttttaaa atagaagggc gtactaaaag cgaatattat gttgcgctta caacaaggac
     1561 ttataaaatg gccatacaag atgctttaga gggtaaattt gagtcaagta agtatgaaaa
     1621 agagattgct acgcttaaga atcgtggttt tacagatggc tatcttgttt cgcgtccttt
     1681 agaaaaaacc gacacgcaaa atcataatac aagcatagaa gaaggttctc atcaagtaca
     1741 tgctataagc gaagatggaa gcttttttaa atgtaaaggg aaaatcgttt taaacacgcc
     1801 ttatgaaatt ttagctcctt taggcgatgt gattcaaact tgcgataatg aactaggtaa
     1861 aatttatcaa aaagaggata gatattttat agagtttaaa aaactcattg ctaaaaacaa
     1921 taaagaattt agcgaaattc atagcggtaa tgaacatgaa atccaattac caaataaaat
     1981 cagtgcatta agttttttaa gaaaggaaat atagatgaat tttgtttcta ttttaatggg
     2041 aagcaagagt gattatgaga ctatgaaaga ggctgctaaa actttagaaa gttttggggt
     2101 aaagtatgaa cttatcattt catcagctca tcgtagtcca aaaagaacaa aagagtatat
     2161 tgcaaatgct gaagaaaaag gtgcgaaggt ttttatagca gcagctggaa tggcagcgca
     2221 tttagctgga gctgttgcag cttatacaac aaaacctgtt ttaggagtgc ctatgccagg
     2281 aagtaatctt gcaagtatgg attctttgtt ttctacggtg caaatgccta gtggaattcc
     2341 tgtaggaact ttagctattg gtaaggctgg agcgatcaat gctgcttatt tggctatgca
     2401 aattttagct atttatgatg ttgatttagc acaaaagctt aaagaagatc gtcttgaaaa
     2461 agaaaaaaaa cttgtatctg attcaaaaga agtagaagtt ttattataag ggataaaaat
     2521 gcaaacctat cttgaacttg aagaattttg taaacttgtg catttaaatg aagatgtggt
     2581 taagggtatg atggccaatg gggctttaaa ttttaaagaa gaagagggta aaatttacat
     2641 cgaagctcat caaggtactt ttagtgtagt acctagttct gcaaaatctc aaactgcaat
     2701 ggtaaattca atgactttag caggagaaag ttttgttgaa aaaacaatag gaactatttt
     2761 aaatttgcat gaaaaagttt tagatgctaa agatgaaaca cttgaagcat taaaaaatga
     2821 gaataaattt ttaaaagacg ccctttattc tatgcaagaa ctttatgatg aagatagaaa
     2881 aactatagaa accttaaaca atgagctaaa acatgcgcgt gaagagatag aatttctcaa
     2941 gcgtaaatat aaattaatgt ggagtaaaac cgcagaaatt tttggagcta agacagagcc
     3001 tgatttggaa atgaataaaa atttagaaaa acctattgaa aatatggaac aataaagaga
     3061 gatacaatga ctttttcaca aatgatactt aatttgcaaa attattggca agagcaaggt
     3121 tgtgcgatta tgcaacctta tgatatgcca gcaggtgcag gaacctttca tccagcaact
     3181 tttttaagaa gtttaggaaa aaaaccttgg gcagctgctt atgtggctcc aagtagaagg
     3241 cctactgatg gacgttatgg tgaaaatcct aatcgcttag gtgcttatta tcaatttcaa
     3301 gttttgatta aacctagtcc tgataatatc caagaattat atcttaaaag tcttgaaaat
     3361 ttgggttttg atttaaaaag tcatgatatt cgttttgttg aagataattg ggagagtcca
     3421 agtttgggtg cttggggttt aggctgggaa gtatggcttg atggtatgga agtcactcaa
     3481 tttacttatt ttcagcaagt tggcggtata gcagtagatt tagtaagtgc tgaaattacc
     3541 tatggtcttg aaagaatagc tatgtatctt caaaatgttg ataatgttta tgatatagtt
     3601 tggagtgaat ttaatggaga aaaaattaaa tacgcagatg tgcataagca aagtgaatat
     3661 gaatttagta aatacaattt tgaagtaagt gatgttaaga tcttaaatga gcagtttgaa
     3721 aattcttaca aagaatgtaa aaatatttta gaacaaggac tagctttacc tgcttatgat
     3781 tattgtatgc ttgctgcaca tacttttaat cttttagatg caagaggagc aatttctgta
     3841 gcacaaagac aagattatat gttaaaaatt cgtgagcttt cgaaaaattg tgctgaaatt
     3901 tataagaaaa atttaaatga aactgagtga aatttataat tttttagatc aattaagtcc
     3961 ctttgatatc caagaatcat gggataatag tggaattttg cttggagata gggatagtga
     4021 aatttcaact gtttatttaa gcttagatat tgatgaaaat atcattaaag aagcgagtga
     4081 aaattcttta attatcacac accatccttt gatatttaaa ggtttaaaag atttatatga
     4141 caagacttat cctagagctt ttattaaaga aatgatttgt aaaaatattt ctttaatcag
     4201 tatgcataca aattacgatt taagtcattt aaacacttat tttacggaag aaattttagg
     4261 ttttaaaatt tcttttaaag acgaattttt aatttatgtg gaaaattcta tgtcttttga
     4321 agctttgtgt gactgggtga aaaaaaagtt aaatttacaa attttacgtg taagtgattg
     4381 tggtaaaaaa gacattaagc gtattgctat atgtactgga agtggcgggg atttaatttc
     4441 taaagtagat gcggattgtt ttttaagcgg agattttaaa tatcatcaag ctttagaggc
     4501 acttagtaat caaattagtc ttattgattt gggtcatttt gaaagtgaga gatatttttc
     4561 tcaatgttta gcaaaagact tgaaaaattt gccgctacaa gctataataa cagtttcaaa
     4621 aaatccattt caatattttt aaggaaaata aatgaataaa tatctcgaac aattagtgct
     4681 tttatcaaaa atagatcaag aaattgatag ttatgaacca aaaatagaca gtattaatag
     4741 gactttaaaa gatgctgagt taaaaatagg aaaaatcaac acagatttag aaaaaatcga
     4801 tgaagaaatc aaagatatag aaaatcaaaa agtacaaaat aatgctcata tttctgagtt
     4861 ttcggcaaaa attaaagagc tttctaaaaa aagtggtgca gtaaaaacag aaaaagaagc
     4921 taatgcttta aaaattgaag aagatattgc aaaagagcaa ttagacgctg caaatgatga
     4981 aattgtaaga ctggataaaa ttttagagaa taaagaaact tataaaaaag aacttgaaga
     5041 agaaaaaatc aaacaagagc aaaatattaa tgagattaga gtaagcatta aatctgaaat
     5101 ggaagttctt gaaaaagata gaatgagtgt ttatgataaa aaaaccaaac ttgtgggcga
     5161 gatgaatcaa aaagttttaa gtttttatga aaaaattcgc aaatgggcga aaaatactgc
     5221 tgtagttcct gttaaaaaac aagcatgcta tggatgtttt atgaaaattt acgataagac
     5281 ttatctgtct gttgtaaaag gtgaagagat tgtaacttgt cctcattgtg gaagaattct
     5341 ttataaagag caagaagaac aaaattgatc tttttttatt attttttaac ttggacggca
     5401 tttttatttt gtgccgtctt tattcttttg ctttcttttt taaaatccaa atacaaaact
     5461 agtttaaaat cccgattttt tctttataaa aatttacatc aagaaaaagc tgatgtacat
     5521 tttcatgctt gttcttacgg ggaggtaaga agtattaaaa ctttggtttt gaaatttgat
     5581 tcaagaataa ctactattac tcaaacaggt tttgaatatg caaaagaatt ttgtaaaaag
     5641 gtaaattatc ttgcttttga aaattttttg cctttttggt ttaagccttg taaggttttg
     5701 gtaatttttg aagcagaata ttggcttatg cttgttttca tggcacacat ttataaaact
     5761 aagattattt tgcttaatgc gagaatatct gataaatctt atcattctta tcaaagattt
     5821 tctttttttt ataaaaaaat tttttcttat attgatgaag tttttgctca aagtgaatta
     5881 gataaagtaa gacttgaaag tttgggagct aaaaatgtta
//
LOCUS       DAPWGO010000085         5871 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.087, whole genome shotgun sequence.
ACCESSION   DAPWGO010000085 DAPWGO010000000
VERSION     DAPWGO010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5871
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.087"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            45..902
                     /gene="cheP"
                     /locus_tag="RJ336_001481"
     CDS             45..902
                     /gene="cheP"
                     /locus_tag="RJ336_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheP"
                     /protein_id="HDZ5213914.1"
                     /translation="MIGDMNELLLKSVEVLPPLPDTVSKLRKYVSEANSNIETMKVAE
                     IISSDPLMTAKLLQLANSPYYGFTREITTINQVITLLGIGNIINIVTADSIRDSFKID
                     VSPYGLDTQNFLKTCNEEATFITNWLNDEDKKLSHLLVPCAMLLRLGIVIFSNFLIQN
                     HKDKDFLAFLNKNENLALAENEFLGVDHISFLGFLLHRWNFDDVLIESICFVRTPHAA
                     REEVKKSAYALAITDHLFAPHDGSSPFNAKAAVALLEEAKTQGINFDLNNLLSKLPSK
                     AKENLNKED"
     gene            930..1409
                     /gene="cheQ"
                     /locus_tag="RJ336_001482"
     CDS             930..1409
                     /gene="cheQ"
                     /locus_tag="RJ336_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheQ"
                     /protein_id="HDZ5213915.1"
                     /translation="MMKSLILPPNEFLDHYILNAEFHRFAGISKNAYKFWKNVEIGRY
                     QGTRIIFLHRNCILEKHQQALRQCSGLNGFVLASAFCSFTGLAPSHLVEKNNSSIYKL
                     LELKEICGIKFVNLKKFYDFLGLNYHQHIYIEKCHFFSPAPFEKRIKITESMCVGYY"
     gene            complement(1378..2688)
                     /locus_tag="RJ336_001483"
     CDS             complement(1378..2688)
                     /locus_tag="RJ336_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ5213916.1"
                     /translation="MSKTLNQKDIKVLGLSSLGGTLEFYDFIIFVFFANYISTNFFPK
                     DLSSFWQMFNTYGIFAAGYLARPLGGVILAHFGDKFGRKRMFMISILLMVIPTFTLAF
                     ISNYESIGFLCIVLLVFIRICQGIAIGGELPGAWVFVYEHAPQGQKRTYLGILTASVV
                     GGILLGSLVFLIMNKIYTQEELHEWAWRIPFFLGGIFGIISAYLRKFLRETPVFEQMK
                     KDKALEKFPLKEVFKKAKMGIVLSMMITWVLTGCIVVMILLMPSYMAKILQINTSIQT
                     YLQIGGILLICLGCIISGILADKIGIIKSCVFFSVFFGIVSLLYFNTLYRQNADFNLV
                     ACLYLLVCFFSGVMNFCPLIMSEVFDAKIKFSGLSFSYNIAYAIAGGLTPQLAFFLHS
                     FALDNLSNFWRFSLGIYVFFLAIIALLCAFIFSYLNNTQRTYSQ"
     gene            complement(2691..2846)
                     /locus_tag="RJ336_001484"
     CDS             complement(2691..2846)
                     /locus_tag="RJ336_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HDZ5213917.1"
                     /translation="MAYEDEEDLNYDDYENEDEEYPQNHHKNYNYDDDDYEYDDDNND
                     DDFYEMD"
     gene            2939..3412
                     /gene="moaC"
                     /locus_tag="RJ336_001485"
     CDS             2939..3412
                     /gene="moaC"
                     /locus_tag="RJ336_001485"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDZ5213918.1"
                     /translation="MKLSHLDEKNHPKMVDVSDKNITSRIATASGMIYMSQEAFDVIK
                     NNTAKKGPVLQTAIIAAIMGAKKTSEIIPMCHPLMLSKVETDIMEFVKECAFKLIVTV
                     KCEGKTGVEMEALSGVSIGLLTIYDMIKAIDKSMRITDILLESKEGGKSGKFVRS"
     gene            3390..3653
                     /locus_tag="RJ336_001486"
     CDS             3390..3653
                     /locus_tag="RJ336_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 domain-containing protein"
                     /protein_id="HDZ5213919.1"
                     /translation="MVNLCDLKKEPQINYPTFWDYKVIFEVHVKASEIFQEILGQREY
                     KFEHSNSSASGKYQSYLLNVYVDSKKDRLDIFDKLKAKAKFVL"
     gene            3643..4803
                     /locus_tag="RJ336_001487"
     CDS             3643..4803
                     /locus_tag="RJ336_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213920.1"
                     /translation="MYFKKEGKMKNTLIIFENSLSNLSKDEASDLLEDLSFNLAYKQI
                     SHNPHETKKVLNSLLVEFLTILKKLDFFDDENVTKVIKALVKASIVDAQNSLYEYISE
                     AELLNKQIENQKNLIKNQISDNFFEFENILQECSFCDEFSGGLNDAILFDIEMLGILK
                     ETAESAFLTTLEKAEDIELTSSEIAKNLVYNAICEAHFEKERILKISSIILNTAFEIA
                     NESMAYAKDLCLGVIKGTRDGIVLAMEKFKASLTYANFEEDVSLKSKELIGIEDDFIA
                     LLKKEIQLQNDPCKSIVENLLEHELDNLFAKFRRLAGESREQLILVLNDIKKNPKIND
                     FNKLTQRKLNRFKQEIFELEKIASEKYKDLNSKKAKKLGVRLWEKAKKFVKK"
     gene            complement(4822..5580)
                     /gene="xth"
                     /locus_tag="RJ336_001488"
     CDS             complement(4822..5580)
                     /gene="xth"
                     /locus_tag="RJ336_001488"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDZ5213921.1"
                     /translation="MKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFP
                     KKIYEYPFKHMYFNSAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALF
                     NIYFPNGQKDEERLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKA
                     NANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDY
                     FFISKGLKDKLKNAFIRDDIFGSDHAPVGIEIDI"
     gene            5698..>5871
                     /locus_tag="RJ336_001489"
     CDS             5698..>5871
                     /locus_tag="RJ336_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A/FlgG phosphoethanolamine transferase
                     EptC"
                     /protein_id="HDZ5213922.1"
                     /translation="MLRLTWLQFTFFNSLMIVLLNFNLFYFVYEKNTQNWFITFVFIV
                     AYFALVHVICSLLF"
BASE COUNT         2170 a          817 c          863 g         2021 t
ORIGIN      
        1 taatcataaa ttataataat actaacttca aggataaatc aaatatgatt ggagatatga
       61 atgagctttt attaaaaagc gttgaagtat tgccaccttt acccgatact gtaagtaagt
      121 taagaaaata tgtgagcgag gctaattcaa atatagaaac catgaaagtt gctgaaatca
      181 tttcaagtga tccgttgatg acggctaagc ttttgcaatt agcaaattct ccttattatg
      241 gttttacaag ggaaattaca accataaatc aagtgattac tttattaggc attggcaata
      301 ttatcaatat agttacggct gattccatta gagatagttt taaaatagat gtttcacctt
      361 atggtttgga tacacaaaat tttttaaaaa cttgcaacga agaggcaact tttatcacaa
      421 attggcttaa tgatgaagat aaaaaacttt ctcatctttt agttccttgc gcaatgcttt
      481 taaggcttgg tattgttatt ttttcaaatt ttcttataca aaatcataag gataaggatt
      541 ttttagcttt tttaaataaa aatgaaaatc ttgctttagc ggagaatgaa tttttaggcg
      601 tagatcatat ttctttcttg ggatttttgt tacatcgttg gaattttgat gatgttttga
      661 ttgaaagtat atgttttgtt cgcactcctc atgctgctcg tgaagaagtg aaaaaatccg
      721 cttatgcttt agcaataaca gatcatcttt ttgctccgca tgatggctct tctccattta
      781 acgcaaaagc tgcagttgct ttacttgaag aggcaaaaac tcaaggaatt aattttgatt
      841 taaacaatct tttatctaag cttcctagca aagctaagga aaatttaaac aaagaagatt
      901 aaagagcctt tttagggctc taaattgtag tgatgaaaag tttaatctta cctcctaatg
      961 aatttttaga tcactatatt ttaaatgccg aatttcatcg ttttgctgga atttcaaaaa
     1021 atgcttataa attttggaaa aatgtagaaa taggcagata tcaaggaaca agaattatat
     1081 ttttgcatag aaattgcatt ttagaaaaac atcagcaagc tttaaggcaa tgtagtggtt
     1141 taaatggttt tgtattggca agtgcttttt gttcttttac tggattagcc ccctctcatt
     1201 tagtggaaaa aaataattct tctatttaca aacttttaga gcttaaggag atttgtggga
     1261 ttaaatttgt taatctaaaa aaattttatg attttttagg gctaaattat catcagcata
     1321 tttatataga aaaatgccat ttttttagcc cagctccttt tgaaaagcgt attaaaatca
     1381 ctgagagtat gtgcgttggg tattattaag ataagaaaaa ataaatgcac atagcaaagc
     1441 tataatagcc aaaaagaaaa cataaattcc caaagaaaaa cgccaaaaat tacttaaatt
     1501 atctaaggca aaactatgca agaaaaaagc aagttgcgga gttaaacctc cagctatagc
     1561 ataagcaata ttatatgaaa aagaaagtcc tgaaaattta atttttgcat caaatacttc
     1621 actcattatt aaagggcaaa aattcatcac tccgctaaaa aaacacacaa gtaaatataa
     1681 gcaagctact aggttaaaat cagcattttg tctatataga gtattaaaat aaagcaagct
     1741 tacaattcca aaaaaaacac taaaaaatac acaagatttg ataatgccta ttttatccgc
     1801 taaaattcca cttataatac accctaggca aataagtaaa attccaccta tttgaagata
     1861 ggtttgtata gaagtgttaa tttgaagtat ttttgccata tagctaggca taagcaaaat
     1921 cattacaaca atgcaacctg tcaaaaccca agtaatcatc atagaaagaa caattcccat
     1981 tttagctttt ttaaacactt cttttaaagg aaatttttct aaagccttgt cttttttcat
     2041 ttgttcaaaa acaggagttt ctcttaaaaa ttttctcaaa taagcagaaa taatcccgaa
     2101 aattccacct aaaaagaatg gaattctcca agcccattca tgaagttctt cttgggtata
     2161 aattttattc ataattaaaa aaactaaact acctaataaa attccaccta caaccgaagc
     2221 ggttaaaatt cccaaataag ttcttttttg accttgtggt gcgtgttcgt atacaaaaac
     2281 ccaagctcca ggaagttccc cgcctatagc aatgccttga caaatgcgta taaaaactaa
     2341 aagcacaata caaagaaaac ctatgctttc ataatttgaa ataaaagcta gagtaaaagt
     2401 tggaataacc attaacaaaa tactaatcat aaacattctt ttgcgtccaa atttatctcc
     2461 aaaatgtgcc agtatcacac cccctaaggg acgcgctaaa tatccagccg caaatattcc
     2521 ataagtatta aacatttgcc aaaaactact taaatctttt ggaaaaaagt ttgttgaaat
     2581 ataatttgca aaaaatacaa aaataataaa atcataaaat tctaaagttc cacctaatga
     2641 tgaaagtcct aaaactttta tatctttttg gttaagggtt ttgctcattc ttaatccatc
     2701 tcataaaaat catcatcatt gttatcatca tcgtattcat aatcatcatc atcgtaatta
     2761 taatttttat ggtgattttg tggatattct tcatcttcgt tttcataatc atcgtaattt
     2821 aaatcttctt catcttcata agccattgtt ttctccttaa ataaaaatac aaagcttatt
     2881 ttatcttaaa tttgtttggt tttgctataa tttttataat tttttaaaag gtgaatttat
     2941 gaaattaagt catttagatg aaaaaaatca tcctaaaatg gtagatgtaa gcgataaaaa
     3001 tattacttca agaatagcca cagctagtgg tatgatatat atgagtcaag aagcttttga
     3061 tgtaattaaa aacaataccg caaaaaaagg tcctgttctt caaacagcta ttattgcggc
     3121 tataatgggg gctaaaaaaa caagtgaaat tattcctatg tgccatcctt taatgctttc
     3181 taaagtcgaa actgatatta tggaatttgt taaagaatgt gcatttaagc ttattgtaac
     3241 agttaagtgt gaaggtaaaa caggggttga aatggaagct ttaagtgggg ttagtatagg
     3301 acttttaact atatatgata tgattaaggc tatagataaa tcaatgagga ttacggatat
     3361 attgcttgaa agcaaagaag gaggcaaaag tggtaaattt gtgcgatctt aaaaaagaac
     3421 cccagatcaa ttatcctact ttttgggatt ataaggtgat ttttgaggtg catgttaagg
     3481 caagtgaaat ttttcaagaa attttaggcc aaagagaata taaatttgaa cattcgaatt
     3541 caagtgcgag tggaaaatat caaagttatt tattaaatgt ttatgttgat agcaaaaaag
     3601 atcgtttgga tatatttgat aaattaaaag ctaaagcaaa atttgtactt taagaaagaa
     3661 ggaaaaatga aaaatacttt aattattttt gaaaattctt tatcaaatct cagtaaagat
     3721 gaagcaagtg atttacttga agacttgagt tttaatcttg catataagca aatttcgcat
     3781 aatcctcatg aaacaaaaaa agttttaaat tctcttttgg ttgaattttt aactattttg
     3841 aaaaaacttg atttttttga tgatgaaaat gttacaaagg ttatcaaagc tttggttaag
     3901 gcgagtattg tagatgctca aaattcgctt tatgagtata ttagcgaagc tgaattatta
     3961 aacaaacaga ttgaaaatca aaaaaatttg attaaaaatc aaatcagtga taattttttt
     4021 gaattcgaga atattttaca agaatgttct ttttgtgatg aatttagcgg tggtttaaat
     4081 gatgctattt tatttgatat agaaatgctt ggaattttaa aagaaaccgc tgaaagtgct
     4141 tttttaacta cattagaaaa ggctgaagat atagaactta caagtagtga aatagctaaa
     4201 aatctcgtat ataatgccat ttgtgaagct cattttgaaa aagaaagaat tttaaaaatt
     4261 tcaagtatta ttttaaatac tgcttttgaa atagccaatg aatctatggc ttatgcaaaa
     4321 gatctttgct taggtgtgat taaaggcaca agagatggta ttgttttggc aatggaaaaa
     4381 tttaaagctt cattaactta tgcaaatttt gaagaagatg ttagtttaaa aagcaaagaa
     4441 ctaataggta tagaagatga ttttattgct cttttaaaaa aagagattca actacaaaat
     4501 gatccttgta agagtatagt tgagaattta ctagaacatg aacttgataa tctttttgct
     4561 aaatttagac gtcttgcagg tgaaagcaga gagcaactaa tattagtttt aaatgatatt
     4621 aagaaaaatc caaagattaa tgattttaat aaacttactc aaagaaaatt aaatcgtttt
     4681 aaacaagaaa tttttgaatt agaaaaaatt gctagtgaaa aatacaaaga tttaaattct
     4741 aaaaaagcta aaaagctcgg tgtaagactt tgggaaaaag caaaaaaatt tgttaaaaaa
     4801 taatatccca tttttgggat attaaatatc tatttctata cctacaggtg cgtgatcaga
     4861 gccaaaaata tcatctctta tgaaagcgtt tttaagttta tcttttaaac cctttgaaat
     4921 gaaaaaataa tcaatcctcc agcctacatt tctttctctt gctttcattc tatagctcca
     4981 ccacgagtat ttttctttga tttcgccatt aatttctcta aaagtatcta taaaaccaag
     5041 ttttagcaaa tcatcaatcc aagctctttc tataggtaaa aaacctgaag tattggcatt
     5101 ggcttttggg tgggtaagat cgatttcttt atgagcggta ttgacatcac cgcaaatgat
     5161 aatttcaaac ccatccttta aaagtttatc caaatatact aaaaaatctg cataaaattt
     5221 catcttaaaa tttaaacgct cttcatcttt ttgaccattt ggaaaataga tattaaaaag
     5281 tgcgatattt ttaaaacggt gttctaaaac cctaccttct tcatcatcaa aaaattcgca
     5341 tttttttact tcgctatcaa aattacaaag actcattacc ccagaatacc ccgctctttt
     5401 agcagaatta aaatacatgt gtttaaaagg atattcataa atttttttag gaaatttatc
     5461 ttcatgtgct ttgatttctt gaaaacctat aaaatcaatt tgttcttgtg ctatccaatc
     5521 aagtgcattt ttatcacaaa tagctcttaa gccattgaca ttccatgaaa gtagtttcat
     5581 tattttcctt aaaattttca ttaaaagtgt aaatcataac ataaaaagat ttcaaactac
     5641 aatccattta aaaaaattca ataaaattaa aagcttaaat ttggaggtgg gatttatatg
     5701 cttagattaa cttggcttca gtttactttt tttaattctt tgatgattgt attgttgaat
     5761 tttaatttat tttattttgt gtatgaaaaa aatacacaaa actggtttat aacttttgtt
     5821 tttattgtgg cctattttgc acttgttcac gtgatttgct ctttgctttt t
//
LOCUS       DAPWGO010000086         5798 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.088, whole genome shotgun sequence.
ACCESSION   DAPWGO010000086 DAPWGO010000000
VERSION     DAPWGO010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5798
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.088"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            86..1129
                     /locus_tag="RJ336_001490"
     CDS             86..1129
                     /locus_tag="RJ336_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDZ5213923.1"
                     /translation="MKKHILLLGLCLSLSLSAKSMSDYKVGEELSDKEGVEYFKELSK
                     RPVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTESTLGPYSKLKKTSNEVNCISCH
                     MDNDGNGLPGTKKYVIPFLNVLNNYPKLDIETMKIISVEDRIRGMGGTDSHRFPNDSK
                     EMKAILAYFKWLKEAYGIKDGVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGE
                     RGLGVKNDNYEQGSGHLYPSLLIYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDE
                     DALDIAAYVNTGFVRMPITTTENRAGLDTAYSKSPSLKPEYFASPQQNLDPKEYIKVK
                     YGPWKNPNHFPGE"
     gene            complement(1153..2502)
                     /locus_tag="RJ336_001491"
     CDS             complement(1153..2502)
                     /locus_tag="RJ336_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HDZ5213924.1"
                     /translation="MQNLNQNEQIKCPSCGSFIDISTALYAQILDKAKQEMLKQKKEF
                     DDEVNAKRAEYTKALNDLKTQKIEQEKLINEQVSQKLLLEKQKFEQELLTQKQNFQKE
                     FSEKFNKEHENEMKIMQEELEKKSKELSEFLSIKAENERLKREQKENEERLKFQAKEE
                     AFKEFKEQESKNLEFEREKMRLEFQKSTQEQDLKYKELETNFKSVAQKLEDAQRRIEQ
                     GSQQLQGEAAELLIEEYIQSEYLSDEVKEVPKGVNGADCLHIVKDNFGNICGSILYES
                     KRTKEFNKEWLDKLKLDSIAAKSDIAVLITKTMPKDKEKTHFKEGILICTFNEFKGVL
                     AVLRESIINAYKLKNALQNKDEKNHILYEYLNSKEFNTQITFILKTYQNMKEELEAEK
                     RALQNIWKKRERAIENLSFNSTAIVSSLNAIFSDLQGGNLIGEEGIKSLENLAKDED"
     gene            2605..3807
                     /locus_tag="RJ336_001492"
     CDS             2605..3807
                     /locus_tag="RJ336_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HDZ5213925.1"
                     /translation="MQKHTKIHGFAKFKLIVILALMSSIAPLSTDMYLPALSHVEQSF
                     QTNSFLTQLSIASFFIAFALGQLIYGPLSDIFGRKIPALVGIFFFIVSSLFCVIIDDI
                     YAFIALRFFEALGGCAGVVIARAIINDLFEIKEAAGIFALMMVFSSLAPMLSPTFGGI
                     LLEYFSWHSIFATLFALGILLFLMILFGLKESAPHLKNKKFSHHEAMKSYKFVLSDKR
                     FLVYILCASFALAAMFAYITGSSFVFTQFFSLSEQKFALLFGANALGFVICANINARL
                     VLKYESEKILAKALMIMFISTVILLVNAFFHPNFLLFELSIFTSIAMLGFIAPNTTTL
                     AMARFKEHSGTASAVLGTVQFGFAGLISFVVGAINANTPIILAFVMCACVLVANMIYF
                     LIKIKEKK"
     gene            3804..4505
                     /locus_tag="RJ336_001493"
     CDS             3804..4505
                     /locus_tag="RJ336_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDZ5213926.1"
                     /translation="MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQ
                     KEVEADTLILPIKFTRSNNNLTNLYEELEQDKENIIKFLEKQGIKEDEISYNSPNIID
                     RLSDPYSNDTQAAYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEY
                     LYTKLNDIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYI
                     KTIRVVSTIEYYLKD"
     gene            complement(4535..>5798)
                     /locus_tag="RJ336_001494"
     CDS             complement(4535..>5798)
                     /locus_tag="RJ336_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HDZ5213927.1"
                     /translation="CYFVDSKFGYKDKDNTTKLNFSNTHFEDNAYFNNSEFYSYADFH
                     ECEFEKTASFYGVRFEKTPNFSQAIFKGNLNAVNTNLNFTFDNLQERIKQEYKDFNKT
                     KEEKPLDKIANDFRDSFRIFKNALIKDNNALDASNFHKYELYCKEIELKESWNKLKKV
                     DIDEDIDQNNKNYSKLMDFLLLGFYRKLCDHHTDFLKVFNNLILLIALYALFVFGFTW
                     LHDDKLEDTRAILTLFGFFDKFRLYFDIISAIFVVFGCGFFVCKLNSYEKKNNVSKKQ
                     NINFIYIIGDFWNLTKSLFFASFISCVFYVLFLLFGFFLNLDKDFGYSLLINTLFVSL
                     YICLVYTKSLFFGRYVVLIFSYIGFIIMLIKQPSVIHPLIGKIANESDKFFNYPSLIV
                     LNILYTILLALVLFSLQKTARKNSIVPS"
BASE COUNT         1904 a          927 c          884 g         2083 t
ORIGIN      
        1 tatttaaatt attcttatta tgcttaatat ttaagaaaaa atacactaaa atcaatttga
       61 actgcaaata aaaaggagga aaatcatgaa aaaacacatt ttattgcttg gtttatgtct
      121 tagtttgagt cttagtgcta aaagcatgag tgattacaaa gtaggagaag aattaagcga
      181 caaggaagga gtagagtatt ttaaggaact ttccaaaaga cctgtgcaag aatggccaaa
      241 taaaaattta agcatcaatg atgttccaaa aggtaagcaa ggggatttaa tccgttatgg
      301 catagagctt ttaagcaaga cagaaagtac tctaggaccc tatagcaagc taaaaaagac
      361 aagcaacgaa gtaaactgta tttcctgtca catggacaat gacggcaatg gtttaccagg
      421 gacaaaaaaa tatgttattc catttttaaa tgtcctaaac aattatccaa aacttgatat
      481 agaaacgatg aaaatcatct ctgttgaaga tagaattcgc ggaatgggtg gaactgactc
      541 tcatagattt cctaatgatt ctaaagaaat gaaagcaatt ttagcttatt ttaaatggct
      601 aaaagaagct tatggcatca aagacggcgt aaagcttgaa ggagattttt tcgctaagat
      661 gaattttcca aatcgcccag ctgaccctgt gcgtggaaaa aaactctttg aagaaaattg
      721 cgttgcttgc catggcgaaa gaggacttgg ggtaaaaaat gataattacg aacaaggtag
      781 cggacattta tatccatctt tacttatcta tcctgatggt ggacacatgg ctatgatacc
      841 atttttagca agatttttaa aatcagccat gccttttggt gcgagtgcag ataatcctat
      901 attaagcgat gaagatgcac tggatatagc agcttatgtc aatacaggtt ttgtaagaat
      961 gcctataacc actacagaaa atcgtgcagg acttgataca gcttatagca aatccccatc
     1021 attaaaacct gagtattttg cttcaccaca acaaaattta gaccctaaag aatacataaa
     1081 agtaaaatac ggaccttgga aaaatccaaa tcacttccca ggagaatgat taattttggg
     1141 cttagcccaa aattaatcct catctttggc taaattttca agacttttaa tcccttcttc
     1201 gcctatcaaa tttccacctt gtaagtcgct aaatatcgca tttaaagaac tcactatggc
     1261 agtggaatta aaacttagat tttctatagc tctttctctt tttttccata tattttgcaa
     1321 agctcttttt tcagcttcta attcttcttt catattttga taagttttaa gtataaaagt
     1381 gatttgcgta ttaaattcct tggaatttaa gtattcgtat aaaatgtgat ttttttcatc
     1441 tttgttttgt aaagcatttt tgagtttata agcgtttata atgctttctc taagcactgc
     1501 taaaacacct ttgaattcat taaaagtaca aatcaaaatt ccttctttaa aatgcgtttt
     1561 ttctttatct tttggcatag tttttgtgat caaaaccgct atatcacttt ttgcggctat
     1621 gctgtctagc ttaagcttat caagccattc tttattaaat tctttagtgc gtttgctctc
     1681 atacaaaata cttccacaaa tatttccaaa attatccttt actatatgca gacaatcagc
     1741 tccatttacg ccttttggca cttcttttac ttcatcgctt aaatactcac tttgtatgta
     1801 ttcttctatg agtagttcgg ctgcttcgcc ttggagttgc tgtgagcctt gttctatcct
     1861 gcgttgtgcg tcttctagct tttgagctac acttttaaaa ttcgtttcta gttctttgta
     1921 tttaagatct tgctcttgag tacttttttg aaattcaaga cgcatttttt ctctttcaaa
     1981 ttccaaattt ttgctttctt gttctttaaa ttctttaaaa gcctcttctt tggcttgaaa
     2041 tttcaatctt tcttcatttt ctttttgctc tctttttagc ctttcatttt cagcctttat
     2101 gcttaaaaac tcgctaagtt ctttgctttt tttctcgagt tcttcttgca tgattttcat
     2161 ttcattttca tgctctttgt taaatttctc gctgaattct ttttggaaat tttgcttttg
     2221 tgtgagaagt tcttgttcaa atttttgctt ttctaaaaga agcttttggc ttacttgctc
     2281 gtttatgagt ttttcttgtt ctatcttttg agtttttaaa tcatttaaag ctttggtata
     2341 ttcagctctt ttagcattta cctcatcatc aaattctttt ttttgtttta gcatttcttg
     2401 cttagcttta tctaaaattt gagcatataa agcagtgctg atatcgataa aacttccaca
     2461 acttgggcat ttgatttgtt cattttggtt taaattttgc ataaaatttc cttagaattt
     2521 ttccctaaat ttaacataga aaaacaaaga ttattctaag attgacttgt taaaatcatt
     2581 cttttagaat aattaggatt acaaatgcaa aaacacacca aaattcacgg ctttgctaaa
     2641 tttaaactca tcgttatcct tgctttgatg tcaagcatag caccgctttc tacagatatg
     2701 tatttgcctg cactttctca tgtggaacaa agttttcaaa ctaattcttt tttaacccaa
     2761 cttagtatcg caagtttttt tatcgctttt gctttaggac agcttatata tgggccttta
     2821 agtgatattt ttgggcgtaa aattccagct ttggtgggga tatttttctt catcgtttcg
     2881 agtttatttt gtgtgattat cgatgatatt tatgctttta tcgctttgag attttttgaa
     2941 gcacttgggg gttgtgcagg tgtggttatc gcaagggcta ttatcaatga cttgtttgag
     3001 atcaaagaag ctgcagggat ttttgctttg atgatggttt ttagttctct tgctcctatg
     3061 ctttcaccaa cctttggggg aattttacta gagtattttt catggcatag tatttttgcg
     3121 actttgtttg ctttaggaat tttacttttt ttgatgatac tttttggttt aaaagagtcc
     3181 gcacctcatc ttaaaaacaa aaaattttcc catcatgaag cgatgaaaag ctacaaattt
     3241 gttttaagcg ataaacgctt tttggtttat atactatgtg cttcttttgc tttggcggcg
     3301 atgtttgctt atatcacagg atcaagcttt gtttttacgc agttttttag cttaagtgag
     3361 caaaaatttg ccttgctttt tggggcaaat gctttaggtt ttgtcatctg tgcaaatatc
     3421 aatgcgagat tggttttaaa atacgaaagc gaaaaaattt tggcaaaagc tttgatgata
     3481 atgtttatat cgaccgtgat tttacttgta aatgcctttt ttcatccaaa tttcttgctt
     3541 tttgaactta gtatttttac aagtatcgct atgcttggtt tcatcgcacc caataccacg
     3601 actttggcta tggcaaggtt taaagaacat agcggaactg cttctgcggt gcttggaacg
     3661 gtgcaatttg gttttgcagg gcttatttct tttgtggttg gggctattaa cgcaaatacg
     3721 ccgataatcc ttgcttttgt aatgtgtgct tgcgtattgg ttgcaaatat gatatatttt
     3781 ctaatcaaaa taaaggagaa aaaatgaaaa caaataatat ctttatggct ttagccatag
     3841 ttttggcaag tttgattcta gcttttggat ttaacaaggc tttaagtgat tttaaaacac
     3901 ttgaaagaag tgtaagtgta aagggtttaa gtcaaaaaga agtcgaagcg gatactttga
     3961 tacttcctat aaaattcaca agatcaaaca acaatcttac aaatttatac gaagaactag
     4021 aacaagataa agaaaatatc atcaaatttt tagaaaaaca aggcataaaa gaagatgaga
     4081 tcagctacaa ctcgccaaat atcatagatc gtttaagcga tccttatagc aacgacactc
     4141 aagctgcata ccgatacata ggcactgcga atttactcat ctatactcaa aatgtaaagc
     4201 ttggaaaaag catactagaa aacatttcaa gtcttgcaaa atttggtata gtaacaaaaa
     4261 tcgatgatta tgatatagaa tacctttaca ccaagctaaa tgatataaaa ccacaaatga
     4321 tagaagaagc aacgctcaat gctagaaatg cagcgataaa attcgcacaa gactcaaaca
     4381 gccatctagg caagataaaa aaggcttctc aaggacaatt tagcatcagc aacagggata
     4441 aaaacacccc ttatatcaaa accataagag tggtttctac tatagaatac tacttaaaag
     4501 actgatgata aaatttcaag ctaagcttta aggcttagct tggcactatg gaattttttc
     4561 gtgcggtttt ttggagtgag aaaagaacta aagctaaaag tatggtatat agtatgttta
     4621 gcactattaa gcttgggtaa ttaaaaaatt tatcagattc atttgcgatt tttcctatca
     4681 gagggtgaat tacactaggt tgttttatga gcattataat aaatcctata tatgaaaaga
     4741 taagcaccac atatctacca aaaaacaaag atttggtata aactaaacaa atatataaac
     4801 taacaaacaa agtatttata agtagtgaat atccaaagtc tttatctaaa tttaaaaaaa
     4861 atccaaataa taaaaataac acataaaaaa cacaagagat aaaggatgcg aaaaataagc
     4921 ttttagtcaa attccaaaaa tcaccaatga tatatataaa atttatgttt tgtttttttg
     4981 agacattgtt tttcttttca tatgaattta atttacaaac aaaaaaaccg catccaaaaa
     5041 ctacaaaaat agcacttatg atatcaaaat aaagcctaaa tttatcaaaa aatccaaata
     5101 aagttaaaat cgctcttgta tcttctagtt tatcatcgtg aagccaagta aaaccaaaaa
     5161 caaataaagc atacaaagca attaataata taagattatt aaaaaccttt aaaaagtctg
     5221 tgtgatgatc gcaaagcttt ctataaaatc ctaaaagtaa aaaatccatc aatttagaat
     5281 aatttttatt attttgatct atatcttcat caatatctac ttttttaagt ttattccaac
     5341 tttcttttag ttctatctct ttgcaataaa gctcgtattt atgaaaattt gaagcgtcta
     5401 aggcattgtt atcttttatc aaagcatttt taaaaatcct aaaagaatct ctaaaatcat
     5461 ttgcaatttt atctaaaggc ttttcttctt tagttttatt aaaatctttg tattcttgct
     5521 tgattctctc ttgtaaatta tcaaaagtaa aatttaaatt tgtatttaca gcatttaaat
     5581 ttcctttgaa aatcgcttga gaaaaattcg gagttttttc aaatctcacc ccataaaaac
     5641 tagcagtttt ttcaaattca cactcgtgaa aatcagcata actataaaat tcagaattat
     5701 taaaataagc attatcttca aaatgagtat ttgaaaaatt taattttgtt gtattatctt
     5761 tatccttata tccaaattta gaatctacaa aataacat
//
LOCUS       DAPWGO010000087         5789 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.089, whole genome shotgun sequence.
ACCESSION   DAPWGO010000087 DAPWGO010000000
VERSION     DAPWGO010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5789)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5789)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5789
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.089"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..167)
                     /locus_tag="RJ336_001495"
     CDS             complement(<1..167)
                     /locus_tag="RJ336_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-to-5' oligoribonuclease B"
                     /protein_id="HDZ5213928.1"
                     /translation="MKIYHLSHTDLDGYACQFIVNFYFKNVRFYNSNYGKEINENFNS
                     IIGDIEKDENFG"
     gene            complement(176..2350)
                     /gene="flhA"
                     /locus_tag="RJ336_001496"
     CDS             complement(176..2350)
                     /gene="flhA"
                     /locus_tag="RJ336_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HDZ5213929.1"
                     /translation="MAKNKIVDLVFPFLGPLIAPVLKAKSLTIVGFLVCILAIIIVPL
                     PSPILDFFLALSIALSVLIILISIYIPKPTDLTTFPTLILIITLFRLSLNIATTRMIL
                     SEGQNGPEAVSEIIAAFGEFVVGGNMVIGVIVFCILVLINFMVVTKGSTRVSEVQARF
                     TLDAMPGKQMAIDADLNAGLIDEQTARARRQEVIAEANFYGAMDGSSKFIKGDAVAGI
                     IITIINIIGGFLIGSFQHDMALSDAASTYTILTIGDGLVSQIPGLITSTATAIIITRA
                     SKDEENFAEGTLTQLLSEYRTLLIVGFVLFIFALVPGLPTLSLGFMALVFLSLGYLTK
                     QVKEGKIDITTVKKSKPSAAAASQSGAGGTTAAPAKKSEEEILKEEEHKINDILKVEI
                     LELELGYGLIKLAENELTERIRSMRRSIAESLGFLMPKIRIRDNLRLKPNEYSFKLKG
                     VSIASAEIYPDKYLAMDSGFITEEIEGIATKEPAFNSDALWIDANLKDEATLNGYIVI
                     DPASVISTHMSELIKAHASELLTRQEVQNLLDKIKNDYPIIVEGALGVAPVSLIQKIL
                     KDLLKHHIPIKDMLTILESVSDIAEVSKSFDMIIEHVRASLARMITNMYLDDKGNLDI
                     FILDSASSAVLMENVQFRDGSYHLPLSVAQTGTLVDTLRAEVAAVANGRIKPFILCVE
                     PQLRKFIADICYNFSINIVVLSFAEIAENTNFNTEGIIRIEL"
     gene            complement(2337..2747)
                     /locus_tag="RJ336_001497"
     CDS             complement(2337..2747)
                     /locus_tag="RJ336_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RrF2 family transcriptional regulator"
                     /protein_id="HDZ5213930.1"
                     /translation="MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKIL
                     QTLAKDGLLKSFKGAKGGFVLIKEPSQYTIKEIVNSAEKKDISVFECSGGTCPNNKEE
                     NCTLMPMLVNLQNKVDEFLDSITLEDIMKNNGKK"
     gene            2922..3194
                     /gene="rpsO"
                     /locus_tag="RJ336_001498"
     CDS             2922..3194
                     /gene="rpsO"
                     /locus_tag="RJ336_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDZ5213931.1"
                     /translation="MALDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLK
                     IYKKDFSSRLGLLKLVGQRKRLLSYLKRKDYNSYSKLITELNLRDK"
     gene            complement(3276..>5789)
                     /locus_tag="RJ336_001499"
     CDS             complement(3276..>5789)
                     /locus_tag="RJ336_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HDZ5213932.1"
                     /translation="KFAKEILKIELDFTYLLKVEQAFKSLLMRVFGGENEKEDIGKSE
                     PMVPKLNILQDNIYENSQINEKEKTNNLEQIIKDSNINASKNSITTAKENFEKLKNQI
                     LDETIEIDKQSLKESRSFVYEHSQQVRNFAQKASKMSISLDEDFNFISEEEVDMIPER
                     FLKPKKLEDIKQIDTNKNLDEPSYKRKNIEIPVSKQEVKPKIFTKELELRENLIKKEK
                     LEQEYKAYQNEILENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESNK
                     INENKNPDKTDNIFEFAPIVEELNHPYIEPTPIKNINEIVIEEKNTLDFIQNTETKID
                     DKKTNDQEIKLQKAVLAKEIAINQALLREIEQGEVEKPKDFTLPPLDFLANPKEHRQE
                     INESEIDKKIYNLLEKLRRFKIGGDVISTYVGPVVTTFEFRPSADVKVSRILNLQDDL
                     TMALMAKSIRIQAPIPGKDVVGIEVPNDEIQTIYLREILQSEVFKNAKSPLTIALGKD
                     IVGNAFVTDLKKLPHLLIAGTTGSGKSVGINSMLLSLLYRNSPKTLRLMMIDPKMLEF
                     SIYNDIPHLLTPVITDPKKAVNALSNMVAEMERRYRLMADAKTKNIENYNEKMKELGE
                     EELPFIVVIIDELADLMMTAGKDVEFYIGRLAQMARASGIHLIVATQRPSVDVVTGLI
                     KANLPSRISYKVGQKIDSKVILDAMGAESLLGRGDCLFTPPGTSSIVRLHAPFASEFE
                     IEKIVDFLKDQQSVEYDESFLKDQQSAGVTTNESFDGEVDELYEEAKRVILEDGKTSI
                     SYLQRRLKIGYNRSANIIEQLTQNGVLSEPDAKGQREIL"
BASE COUNT         1838 a         1002 c          780 g         2169 t
ORIGIN      
        1 ccgaaatttt catctttttc tatatcgcct ataatagagt taaaattttc attaatttct
       61 ttaccataat tagaattata aaatctcaca tttttaaaat aaaaatttac tataaattga
      121 caagcataac catcaagatc tgtatgcgaa agatgataaa ttttcattat attccttaaa
      181 gttctatcct aataataccc tcggtattaa aatttgtatt ttctgcaatt tctgcaaaac
      241 ttaacactac tatattaatg ctaaaattat aacaaatatc agcaatgaat tttctaagct
      301 gcggttcaac gcaaagtata aaaggcttga tacgaccatt tgctaccgcg gcaacttcag
      361 cccttagagt atctactaaa gtgcctgttt gagctacact taaaggcaag tgataacttc
      421 catctctaaa ttgtacattt tccattaaaa ctgcagagct agcagagtct aagataaaaa
      481 tatccaaatt tcctttatca tctaaataca tatttgtaat catcctagct aaagacgctc
      541 ttacatgttc aataatcata tcaaaactct tgcttacttc tgctatatcg cttacagatt
      601 ctaaaatagt aagcatatct ttaattggta tgtgatgctt aagcaagtct ttgagaattt
      661 tttgaataag acttacaggt gcaacaccta aagcaccttc tacgatgatt ggataatcat
      721 ttttaatctt atcaagaaga ttttgcacct cttggcgtgt aagaagttcg cttgcatgtg
      781 ctttgataag ttcgctcata tgtgttgaaa taacacttgc aggatctatt actatatagc
      841 catttaatgt tgcttcatct tttaaattcg catcaatcca aagtgcatca gagttaaaag
      901 cgggttcttt tgtagcaatc ccttctatct cttctgtgat aaaaccacta tccatggcta
      961 aatatttatc cggataaatt tcggcacttg ctatagacac gcccttgagt ttaaaactat
     1021 actcatttgg tttaagtctt aaattatctc ttattcttat ttttggcatt aaaaatccta
     1081 aactttcagc aatacttctt ctcattgagc gaatcctttc tgtaagttcg ttttcagcaa
     1141 gcttaataag tccgtatcca agttcaagtt ctaaaatttc aactttaagt atgtcgttaa
     1201 tcttgtgttc ttcttctttg agaatttctt cttcgctttt cttagcaggc gctgccgttg
     1261 tcccacctgc tccactttga gatgcagctg cagcacttgg tttgcttttt ttaactgtag
     1321 ttatatcaat tttaccttcc ttaacctgct tggtaagata gccaagactt aaaaaaacta
     1381 aagccataaa gcccaaggat aaagttggta agccaggtac taacgcaaag ataaaaagta
     1441 caaaacctac tattaaaagc gtgcgatatt cgcttaaaag ttgagttaaa gttccttctg
     1501 caaaattttc ctcatctttg cttgcacgag tgataattat agcggttgca gtagaagtaa
     1561 taagccctgg aatttgcgat acaagtccat cacctatggt taaaatagta taagtagaag
     1621 cagcatcgct taaagccata tcgtgctgaa aagatcctat taaaaaacca cctatgatat
     1681 ttataatagt tatgataatt cctgcaacag catctccttt gataaattta gaagaaccat
     1741 ccattgcgcc atagaagttt gcttcagcaa taacttcttg acgtcttgct ctagcggttt
     1801 gttcatcaat aagccctgca tttaaatccg catcaatagc catttgttta cctggcatcg
     1861 catcaagtgt gaatcttgct tgtacttcag aaacccttgt actacctttt gttacaacca
     1921 tgaaattaat caatactaag atacaaaata caatcacacc aatgaccata tttccaccaa
     1981 caacaaattc tccaaatgct gctataatct cactcacggc ttcagggccg ttttgccctt
     2041 cgcttaaaat catccttgta gtagctatat ttaatgaaag tctaaataaa gtaataatca
     2101 agattaaagt tggaaaagtt gttaaatctg tcggtttggg tatataaata gaaattaaaa
     2161 taattaatac cgataaagct atgcttaaag ctaagaaaaa gtccaaaata ggacttggta
     2221 aaggaactat aataatagct aaaatacaaa ctaaaaaacc aacaatagtt aagcttttag
     2281 cttttaaaac aggagcaatt aaaggcccca agaaaggaaa aactaaatcg actattttat
     2341 tttttgccat tatttttcat aatatcttct aaagtaatag aatctaaaaa ttcatctact
     2401 ttattttgta aatttactaa cataggcatt aaggtgcaat tttcttcttt attatttgga
     2461 caagtgccac cactgcattc aaatacactg atatcctttt tttcggcact attaacaatt
     2521 tcttttatag tatattgact tggttctttg attaaaacaa aaccaccttt tgccccttta
     2581 aaggatttta acaagccatc tttagctaaa gtttgtaaaa ttttagctaa aaaactttta
     2641 ggaatatcaa gctctaaagc taaagaatct acatcttgag gtgtttcttt ttgagaaata
     2701 taaattaaag aaagtaaagc gtattcgcta gctttggtaa atagcacaga ttctccttat
     2761 tataactaca gaaatagctg taattataat aaataattct tagaaaaaga cttaaatttt
     2821 gacaaaacct tctaaaaaag ataaattcag tttatttttt gctttttaag gtaaaattat
     2881 agttctttaa ttttattatt ttaccaatca ggaggtctat catggctttg gattcggcca
     2941 aaaaagcaga aatagttgcg aaattcgcta aaaaaccagg tgatactggt tcaacagaag
     3001 ttcaagtggc tcttttaact gcaagaattg cagaacttac agaacattta aaaatctaca
     3061 aaaaagactt ttcatcaaga ttaggacttt taaaacttgt aggtcaaaga aaaagacttt
     3121 tatcttatct taaaagaaaa gattataatt cttatagtaa gttaattacc gaattaaatc
     3181 ttagagataa ataattttaa gcccttttta ctgggctttt atctttataa attcttcttt
     3241 atgtaattag tttttatatc aaaataaaaa aaatcttata aaatttccct ttgtcctttg
     3301 gcatcaggtt cgcttaaaac tccattttga gtaagttgtt caataatatt tgcagagcgg
     3361 ttatagccga tttttaaacg gcgttgcaaa taagaaatgc ttgtttttcc atcttctaag
     3421 attactcttt tagcttcttc ataaagctca tctacttccc catcaaagct ttcatttgtt
     3481 gtaacacccg cgctttgctg atcttttaag aagctttcat catattctac gctttgttga
     3541 tcttttagaa aatccacgat tttttctatt tcaaattcac tcgcaaaagg tgcatgcaaa
     3601 cgcactatag aacttgttcc aggaggagta aataaacaat ctcctcttcc aagtaaactc
     3661 tcagcaccca tagcatctaa gataacctta gagtcaattt tttgccctac tttataagaa
     3721 attctacttg gcaaattcgc tttaattagt cctgttacaa catcaacaga aggccgttgt
     3781 gtggctacaa tcaagtgaat tccacttgct cttgccattt gagcaagtct tcctatataa
     3841 aattctacat ctttacccgc agtcatcatt aaatcagcaa gttcatcgat aattactaca
     3901 ataaaaggaa gttcttcttc acctaattct ttcatttttt cattgtaatt ttctatattt
     3961 ttggtttttg catcagccat taaacgatag cgtctttcca tttcggctac catatttgaa
     4021 agtgcattga ctgctttttt tggatctgtg ataacaggag ttaaaagatg aggaatgtca
     4081 ttataaatgc taaattcaag catcttagga tctatcatca tcaaacgcaa ggttttagga
     4141 gagttgcgat ataaaagact taaaagcata gaatttatcc ccacactttt accactacct
     4201 gtagttcctg caataagcaa atgcggaagt tttttaagat cggttacaaa agcattacct
     4261 actatatctt tacctaaagc tatggttaaa gggcttttag catttttaaa aacttcactt
     4321 tgtaaaattt cccttagata aatggtttga atttcatcat ttggaacttc tatgcctaca
     4381 acatcttttc ctggtattgg agcttgaata cggattgatt ttgccattaa agccatagtt
     4441 aaatcatctt gtaaatttaa aatacgactt acttttacat ctgcactagg acgaaattca
     4501 aaagtagtta caacaggacc aacataagtg cttataacat caccgcctat tttaaaacga
     4561 cgcaactttt caagaagatt ataaattttt ttatctattt cactttcatt gatttcttgt
     4621 ctatgttctt ttggattagc taaaaaatct aatggcggca aggtaaaatc ttttggtttt
     4681 tctacttcgc cctgctctat ttcacgcaat aaagcttggt taatagcaat ttctttggct
     4741 aaaactgctt tttgaagttt aatttcttga tcatttgttt ttttatcatc aattttagtt
     4801 tctgtatttt ggataaaatc gagtgtattt ttttcttcta taactatttc atttatattt
     4861 tttataggag taggttctat ataaggatga tttaactctt ctacaatggg agcaaattca
     4921 aagatattgt ctgttttatc tggattttta ttttcattta ttttgtttga ttcttctgtt
     4981 tctgttttaa ttgtttttgg gctattaaaa ctatatttat tcccttctat aatatcgctt
     5041 gaatttatcg catcatattc ttctaatttt ttaatttctt gttttacttt attttctaaa
     5101 atttcatttt gataggcttt gtattcttgt tctagttttt ctttttttat caaattctct
     5161 ctaagttcaa gctcttttgt aaaaattttt ggtttaactt cttgtttaga aactggaatt
     5221 tcaatatttt tacgcttata acttggctca tctaaatttt tatttgtatc tatttgcttt
     5281 atatcttcaa gttttttagg ttttaaaaaa cgttcaggaa tcatatctac ctcttcttct
     5341 gaaataaaat taaaatcttc atcaagacta atgctcattt tactagcttt ttgtgcgaaa
     5401 tttcgcactt gttgagaatg ctcataaaca aaacttctcg attcttttaa gctttgttta
     5461 tcaatctcta tggtttcatc taaaatttga ttttttagtt tttcaaagtt ttccttagct
     5521 gtggtaattg aatttttact tgcgttgata ttgctatctt taattatctg ttctaagtta
     5581 ttggtttttt ctttttcatt tatttgtgaa ttttcgtata tattatcttg taaaatattt
     5641 aattttggca ccataggttc tgatttgcct atatcttctt tctcgttttc tccaccaaat
     5701 acacgcataa gtaaagattt aaaagcttgc tctactttta ataaataagt aaaatctaat
     5761 tctattttta aaatttcttt tgcaaattt
//
LOCUS       DAPWGO010000088         5579 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.090, whole genome shotgun sequence.
ACCESSION   DAPWGO010000088 DAPWGO010000000
VERSION     DAPWGO010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5579)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5579)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5579
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.090"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            111..1106
                     /locus_tag="RJ336_001500"
     CDS             111..1106
                     /locus_tag="RJ336_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDZ5213933.1"
                     /translation="MKKILSLSVASLALCGALNAVDLKIAGSSTVYPFTSFVAEEYAS
                     IKNTKTPIVESLGTGGGFKVFCEGTTDISNASRPMKLSEFETCKKAGVTDIVGMMIGY
                     DGIVLAQNKTNAPLNITKKELFLALAKEIPQNGKLIPNPYTNWNQINKNLPNRKISVY
                     GPPSSSGTRDTIEELVMSDVSKKIPEYKGEYKTIRQDGAYIPSGENDNLIVSKLTIDK
                     DAFGIFGYSFLVSNSDKINAANIDGVTPSEESIADEKYELARSLFIYINAKKNPKEAF
                     DFAKIYMSDDLAKSGGELEKIGLVPLSDDKLKASQKHVEDRKILNDELVKAGKVF"
     gene            1116..2030
                     /gene="pstC"
                     /locus_tag="RJ336_001501"
     CDS             1116..2030
                     /gene="pstC"
                     /locus_tag="RJ336_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDZ5213934.1"
                     /translation="MLKEKIIKFALFLCAFVSVIVSFAIMLTILIEALKFFQKESVVT
                     FLFSSQWAADAAFMNADGTSKQGVFGALSLFWGTFYISLIAMLTALPLGVMCAIYLGV
                     FAGKKSKNYLKPILEIIAGIPTVVFGFFAAIVVAPFIVWFFSLFGIQASFQSALGAGF
                     IMGIMIVPIVASLSQDCIEAVSEKRINGAYALGMTKKEVVFAVILPEAIPGIVAACLL
                     GLSRALGETMIVVMAASLRPNLTLNFLEDMTTVTVKIVEALSGDQAFDSSLALSAFSL
                     GLVLFVITLIINMFSVYLINRFHKRKNL"
     gene            2027..3115
                     /gene="pstA"
                     /locus_tag="RJ336_001502"
     CDS             2027..3115
                     /gene="pstA"
                     /locus_tag="RJ336_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012857620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDZ5213935.1"
                     /translation="MKKLFKKRQKASKSFKRLCKMGLYINLIFLCIFLGSVAYLGFPA
                     FKQTYIFVEANRNSPAYDLLSRAEQRKIRTGQITEKTWLLANSEVDQYMKQKYNRLSE
                     KQRTLVDDLVQKGEIELKFNSNFFLNGDSKSPENSGILSSVIGTLLVMLVCMVVSVPI
                     GVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFINLFGMPRSSALVG
                     GLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIMLPLAMPMILTGS
                     ILTLAQAIGETAPLMIIGMIAFIPDVASSIFDPTSVLPAQIYSWSAMPERAFLERTAA
                     GIIVLLGLLVVLNLSAILLRKYFQGKLK"
     gene            3112..3852
                     /locus_tag="RJ336_001503"
     CDS             3112..3852
                     /locus_tag="RJ336_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213936.1"
                     /translation="MIAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTF
                     LRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKSIYENISYA
                     PKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIK
                     PKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGE
                     LIEFGESKEFFENPKQEKTKAYLSGAFG"
     gene            3924..>5579
                     /locus_tag="RJ336_001504"
     CDS             3924..>5579
                     /locus_tag="RJ336_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213937.1"
                     /translation="MFETLLKLSEEPLKSKIKDLYFSKFNYVGAKIDFCITQNLGLLG
                     EINLLWAEAKQGKSELKKSFVQLVLTIGKYKFYTEQTPNLLCAFDGEKIAFLPFACLQ
                     EIFYQSDINFSVTPSNHTSEQFLKLLKELDSILNTAQIFYYEKNDEELKTFIKENLTS
                     ENISKIKIDKNNFVSIYHKWNKMVKDTISIDWNLAKKSGIIDADFYLADLLSSENETI
                     SQNLFAILKKDYYEFNKTKSDLGSIINERTSFKDNQKAHHEFWAIYERPPREEFWDYI
                     IKRRDLLVDQDVRERKGAFFTPRIWVDKACEYLSKTFGEDYEEGYYIWDLAGGTGNLL
                     ANFTNKKNIFCSTLDKADIDVIHERIKNGANLFENHVFQFDFLNDEFFDEVDDKGKII
                     QKSKLPLILQEILKDENKRKKLIIFINPPYAEAGNSSTMSGTGKHKTGVSLDNYVYKK
                     YKVILSSARNELFAQFFIRIYNEIEGAILASFSTLKYVNSTNFIKFRQAFKAKFLKGF
                     IVPAYTFDNVKGNFPIGFLIWNTSKKEDLKKIKLDVFNENGNFL"
BASE COUNT         1949 a          715 c         1026 g         1889 t
ORIGIN      
        1 ttttgatagt taaaaattat atttaagaaa aatacaaaat aaaaaatgtt tccaaaatgt
       61 ttccaagttt ttttaaactt ccattacttt tttaaagtta aggagaaaaa atgaaaaaaa
      121 ttctatcttt aagtgtggca agtcttgcac tttgtggtgc tttaaatgca gtagatttaa
      181 aaatcgcagg ttcatcgact gtgtatcctt ttacttcttt tgtagctgaa gaatatgctt
      241 cgatcaaaaa tacaaaaact cctatagtag agagcttggg aacagggggt ggatttaagg
      301 tattttgtga aggaactact gatatttcta atgcttcaag acctatgaaa ttaagcgaat
      361 ttgaaacttg caaaaaagca ggggtaactg atatagtagg gatgatgata ggttatgatg
      421 gtatagtttt agctcaaaat aaaaccaatg ctccattaaa tatcacaaaa aaagaacttt
      481 tcttagcatt ggcaaaagaa attccacaaa atggaaaact tataccaaat ccttatacaa
      541 actggaatca aatcaataaa aatttaccaa atcgtaaaat tagtgtttat ggtccaccat
      601 caagttcagg aacaagagat actatagaag agcttgtaat gagtgatgtg tctaaaaaaa
      661 ttcctgagta taaaggcgag tataaaacca tacgccaaga tggtgcttat atcccaagtg
      721 gtgaaaatga taatctaatc gtttcaaaac ttactattga taaggatgct tttggaattt
      781 ttggttatag ctttttagtg agcaattcag acaaaatcaa tgctgctaat atagatggtg
      841 ttacgccaag cgaagaaagc atcgcagatg aaaaatacga acttgcaaga agtttgttta
      901 tttatatcaa tgctaagaaa aatccaaaag aagcctttga ttttgcaaaa atttatatga
      961 gtgatgattt ggcaaaaagt ggtggagagc ttgaaaaaat aggacttgtt cctttgagtg
     1021 atgataaatt aaaagcttct caaaaacacg tagaagatag aaaaatttta aatgatgagc
     1081 ttgtaaaagc tggaaaagtt ttttaaggaa aaactttgtt aaaagaaaaa ataatcaaat
     1141 ttgcactttt tttatgtgct tttgtaagcg tgatagtaag ttttgctatc atgcttacaa
     1201 ttttaattga agctttaaaa ttctttcaaa aagaaagcgt tgttaccttt ttattctcaa
     1261 gtcagtgggc agctgatgca gcttttatga atgcagatgg cacgagtaaa caaggtgttt
     1321 ttggggcgct atcgcttttt tggggaactt tttatatttc attgattgct atgctaacgg
     1381 ctttaccttt aggggttatg tgtgctatat atttaggtgt ttttgctggc aaaaaatcta
     1441 aaaattactt aaaacctatt ttagaaatca ttgcagggat tcctactgtt gtttttggat
     1501 tttttgcggc tatagttgta gcgcctttta tagtgtggtt tttttcttta tttggcatac
     1561 aagcaagctt tcaaagtgct ttaggcgcag gttttatcat ggggatcatg atagtaccta
     1621 tagtggcttc tttatctcaa gattgcattg aagcagtaag cgagaaaagg attaatggcg
     1681 cttatgcttt aggtatgaca aaaaaagaag tggtttttgc cgtgatttta cctgaggcta
     1741 ttcctggtat agttgcagct tgtcttttag gactttcaag agccttaggc gaaactatga
     1801 tagtggtgat ggcagcttct ttgcgtccaa atttaacttt aaatttttta gaagatatga
     1861 caacggtaac ggtaaaaatc gtagaagctt taagtggaga tcaagctttt gatagttctt
     1921 tggctttaag tgctttttct ttaggtttgg tgctttttgt catcacttta atcatcaata
     1981 tgtttagcgt ttatcttatc aatcgctttc acaaaaggaa aaatttatga aaaaactttt
     2041 taaaaaaaga caaaaagctt caaagtcttt taaaagactt tgtaaaatgg ggctttatat
     2101 taatttaatt tttctttgta tctttttagg aagtgtagct tatcttggat ttcctgcttt
     2161 taagcaaact tatatttttg tagaggctaa tagaaattct cctgcttatg atcttttatc
     2221 tcgcgcagaa caaagaaaaa taagaacagg acaaatcact gaaaaaactt ggcttttggc
     2281 aaattcagaa gtagatcaat atatgaagca aaaatataat cgccttagtg aaaaacaaag
     2341 aactttagtc gatgatcttg tgcaaaaagg cgagatagag cttaaattta atagcaattt
     2401 ctttttaaat ggggactcaa aatctcctga aaattcagga attttatctt cagttatagg
     2461 gactttgctt gttatgcttg tttgtatggt tgtgagtgtt cctataggcg ttgcagcggc
     2521 aatttactta gaagaatttg caccacaaaa tatccttaca cattttatag aagtgtgtat
     2581 taacaacctt gcaagtattc ctagtatctt gtttggactt ttaggacttg gagtgtttat
     2641 caatcttttt ggaatgcctc gttcaagtgc tttagtgggt gggcttactt tggcgatcat
     2701 gagtttgcct attatcattg tttcaaccaa agcggcctta aaaagtgtgg atatcaatat
     2761 gaaaaatgct gcttatgcct taggtatgac aaaggttcaa atggtaaaag gtattatgtt
     2821 acctttggct atgcctatga ttttaacagg ttctatttta actttagctc aagctatagg
     2881 cgagactgca cctttgatga ttatcggtat gatagcattt atccctgatg tagctagttc
     2941 gatttttgat ccaactagcg ttttacctgc tcaaatttac tcatggtcgg ctatgccaga
     3001 gcgtgcattt ttagaaagaa cagcagcggg tattattgtg cttttaggac ttttagtcgt
     3061 gttaaatctt agtgcaatat tattaagaaa atattttcaa ggaaaattaa agtgatagca
     3121 aaaacaacaa atttaaattt attttatgga aaaaaacaag ctttatttga tatcaatatg
     3181 caaatagagc aaaacaaaat tactgcactc atcggtgctt caggatgtgg taaatccact
     3241 tttttgcgtt gttttaatag aatgaatgat aaaattgcaa aaatcgatgg tttagtggaa
     3301 attgaaggaa aagatgttaa aaatcaagat gtagtagcct tgcgtaaaaa tgtaggcatg
     3361 gtttttcaac aacctaatgt ttttgtaaaa agcatttatg aaaacatctc ttatgcacca
     3421 aaacttcatg gtatgattaa aaacaaagat gaagaagaag ctttggtggt ggattgcttg
     3481 caaaaagtgg ggctttttga agaggttaaa gataaattaa agcaaaatgc cctagctctt
     3541 tcaggcggac aacaacaacg cctttgtatc gcaagagctt tagcgatcaa acctaaactt
     3601 ttgcttttag atgagccaac ttctgcactt gatcctataa gttcaggcgt gattgaagag
     3661 cttttaaaag aattaagtca taatctttct atgatcatgg ttacgcataa tatgcaacaa
     3721 ggcaaacgcg tagctgatta tacagcattt tttcatcttg gagagcttat agaatttggt
     3781 gaaagtaaag aattttttga aaatccaaaa caagaaaaaa ccaaggctta tttaagcggt
     3841 gcttttgggt gagatttata caaaaacaag tatctttgta ttaaaattat atccttaaaa
     3901 aagaatttta taaggatata gttttgtttg aaacactttt aaaactaagc gaagaacctt
     3961 taaaaagcaa gattaaggat ttgtattttt ctaaatttaa ttatgtaggt gctaagattg
     4021 atttttgtat cactcaaaat ttaggacttt taggtgaaat taatttgctt tgggctgaag
     4081 ctaaacaagg aaaaagtgag cttaaaaaat cttttgtaca gcttgtgctt accataggaa
     4141 aatataaatt ttatacagag caaactccaa atttactttg tgcttttgat ggagaaaaga
     4201 tagctttttt accctttgct tgtttgcaag aaatttttta tcaaagcgat ataaacttta
     4261 gtgtaacgcc tagcaatcat acaagtgagc aatttttaaa acttctaaaa gaattagata
     4321 gtattttaaa tacagcacaa attttttatt atgaaaaaaa tgatgaagaa ttaaaaactt
     4381 tcataaaaga aaatcttaca agtgaaaata taagtaaaat taaaatcgat aaaaacaatt
     4441 ttgtaagcat ttatcataaa tggaataaaa tggttaaaga tactatcagt attgattgga
     4501 atttggctaa aaaaagcggg atcatagatg ctgattttta tttggctgat ttgctttcaa
     4561 gtgaaaatga aaccatcagt caaaatttat ttgccattct taaaaaagat tattatgagt
     4621 ttaataaaac aaaaagtgat ttaggctcta tcattaacga acgcacttct tttaaagata
     4681 atcaaaaagc tcatcatgaa ttttgggcga tttatgagcg tcctccaagg gaagaatttt
     4741 gggattatat tataaaacgc agagatttgc ttgtagatca agatgtaaga gagcgaaaag
     4801 gagcattttt taccccaaga atttgggtgg ataaggcttg cgagtatctt tctaaaactt
     4861 ttggggagga ttatgaagag gggtattata tatgggattt agcgggtgga acaggaaatt
     4921 tactagcaaa ttttacaaat aaaaaaaata tcttttgctc tactcttgat aaagccgata
     4981 tagatgtgat acatgagcgt ataaaaaatg gtgcgaattt gtttgaaaat catgtttttc
     5041 aatttgattt tttaaatgat gaattctttg atgaagtgga tgataagggt aaaatcatcc
     5101 aaaaatcaaa actaccttta attttgcaag agattttaaa ggatgaaaat aaacgcaaaa
     5161 aattaataat ctttataaat ccaccttatg cagaagctgg aaatagctct actatgtctg
     5221 gaaccggaaa acataaaact ggtgttagtc ttgataatta tgtttataag aaatataaag
     5281 ttattttaag tagtgctaga aatgaacttt ttgcgcaatt ttttataaga atttataatg
     5341 aaatcgaagg agctatacta gctagttttt cgactttaaa atatgtaaat tctacaaatt
     5401 ttataaaatt tagacaagct tttaaggcta agtttttaaa aggttttata gtgcctgctt
     5461 atacttttga taatgtaaaa ggaaatttcc ccataggatt tttgatatgg aatacaagta
     5521 aaaaagaaga tcttaaaaaa ataaaacttg atgtatttaa tgaaaatgga aatttttta
//
LOCUS       DAPWGO010000089         5351 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.091, whole genome shotgun sequence.
ACCESSION   DAPWGO010000089 DAPWGO010000000
VERSION     DAPWGO010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5351
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.091"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            120..1106
                     /locus_tag="RJ336_001505"
     CDS             120..1106
                     /locus_tag="RJ336_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDZ5213938.1"
                     /translation="MNKFSIVLTLLLCGSCALALDPNLEKTKSATGIDLPTAKWNLPK
                     ALNEDGTIDETKMPKNSEYSKMVILGNKILNETSKYVGPQAKDPKKRFAGNNLSCSSC
                     HANGGSVQNQSGFVGIWARFPQYNARGDKVITLADRINGCFERSMNGKRMPSDTPEMK
                     AMLTYMQWLSQGVPVGAKIEGQGLKKIDFISRAADPKKGKAIYMDKCAVCHQENGLGL
                     KNEDSAGAYYLYPPLWGDDSYNTGAGMYRLIKAASYIKENMPQGAPDLSLEDAYDVAA
                     YMNSQARPIKANRDKDFPDRKVKPLDMDVGPYDDSFFTTQHRYGPYTNMIKK"
     gene            complement(1140..1781)
                     /locus_tag="RJ336_001506"
     CDS             complement(1140..1781)
                     /locus_tag="RJ336_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HDZ5213939.1"
                     /translation="MRKFFCKFVLTLVFCSSFALANNSFITLNPSLPNSENSVIEAFS
                     YKCIHCYNHHKFGTLEKLREAFPNLHFKLYPVSLMNGEFSKEMNELFAFAQYKDEQNG
                     KDASYSDSLSHKLADVYFVSYFLNKQRNFSNLDEFYDIGLKAMNVNKNEVLNFLNTPK
                     AKEILSEFQRANDIAKTYGTPAFVVNGKYQINPSAINSMQDLEDLVKKLSNMK"
     gene            complement(1867..3729)
                     /locus_tag="RJ336_001507"
     CDS             complement(1867..3729)
                     /locus_tag="RJ336_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004315485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HDZ5213940.1"
                     /translation="MRLSKTLCMALLAGSTLLAPNVLMAMGGPSGAKIDWQIQGQIGA
                     IKMNPYGLSPLTAIIMDNGYVLSDIKVTIVPKPNGQTISYNVNSKMAKTYGGIPIFGL
                     YPSYLNTVKVSYTKTANGKSQKVIDEIYKITTPGVSIEPSGSTDQRGTPFENVKVLKM
                     DPKFSDRLYLVNNAPGKQSGKGSQSVWNNPVGGAMEWDENSNVFIIDTKGEIRWYFDN
                     DKLMNWDNIYNRGIMMGFHQNKDGALTWGFGQRYVKYDILGREIFNRKLPAAYIDFSH
                     AMDNMQNGHYLLRVASANTLRPDGKHVRTVRDTIVEVDENGNVVDDWRLYEILDPYRS
                     TIIKALDQGAVCLNIDASKAGKTLSDEELAKMDESDKFGDIAGTGIGRNWAHVNSVDY
                     DPSDDSIIISSRHQSAVVKIGRDKKIKWILGAHKGWNKEFQKYLLQPVDKNGKKIVCD
                     DDYSKCPGYENDNGGFDFTWTQHTGWRIDSKSNKRYIYISVFDNGDARGAEQPAFASQ
                     KYSRAVIYKIDQQNKTVEQIWEYGKNRGNEWFSPVTSLTQYEPDKDSIMVYSATAGMA
                     FDLSKGVSLGEPKPEIDEFNWGAKEPSVQIQFSGSGTGYQAMPFSVDQAFNLKK"
     gene            complement(3829..4626)
                     /gene="dsbI"
                     /locus_tag="RJ336_001508"
     CDS             complement(3829..4626)
                     /gene="dsbI"
                     /locus_tag="RJ336_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide oxidoreductase DsbI"
                     /protein_id="HDZ5213941.1"
                     /translation="MSCIKMKDNCRKFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQ
                     EYLFMEPCEQCVYIRFDMLVMAIGGMIALINPTNNIIKIFSYSLAFYGIWLGLEHCLT
                     LNHIHEVVHSENPFAGVDGCREIPIYPFNLPLHEWAPSWFLPTGECGMDTPVVPENAY
                     NHLNAFQKFFIGTPPDFENGLYSNGWYLIPSLKFMNMAICCLIAFLCCFIVLFAMFIA
                     YVLDKNKLNAKIFALVIVILVLVLKFIGEPKNPNQNIASLNHLNQVV"
     gene            complement(4623..5285)
                     /locus_tag="RJ336_001509"
     CDS             complement(4623..5285)
                     /locus_tag="RJ336_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HDZ5213942.1"
                     /translation="MKFPVKLARSIVVCAFLAGISASALSEGKEYIILKNPIANADNS
                     LIEIFSYRCTHCYDHHKFNTMGKVKEKLPNLTYKFYPVSSMGDYGRQANEIFAFAAFK
                     DGVNKIDPTDKNSLTHKVAKAYFNAYFKKKQRWENGKNPEAFYSVGLKAMNVSKADLE
                     NFLKTPEAAELLKSYEIANPISQNYGTPAFVVNGKYQIIPSAINSPEALIEITKELSK
                     QK"
BASE COUNT         1832 a          924 c          774 g         1821 t
ORIGIN      
        1 aaatgaatat tattttaagg tttaaagctt ttttcttaaa atgtaattag gttttattga
       61 ctttttctaa ataaagtctt atactgaatt taaattacgc aaaataagga ggaaaattga
      121 tgaataaatt ttctatagtt ttaactttgt tgttatgtgg aagttgtgct ttagccttag
      181 atccaaattt ggaaaaaacc aagagtgcaa caggtattga cctgcctact gctaaatgga
      241 atttgcctaa ggctttaaat gaagatggca ctatagatga aactaaaatg ccaaaaaatt
      301 cagaatatag caaaatggtt attttaggaa ataaaattct taatgaaaca agcaaatatg
      361 tgggtccaca ggccaaagat cctaaaaaaa gatttgcggg aaataatctt tcttgttcaa
      421 gctgtcatgc taatggtgga agtgtgcaaa atcaatcggg ttttgtagga atttgggcaa
      481 gatttccaca atataatgcc agaggagata aagtaattac cttagcagat aggatcaatg
      541 gctgttttga acgctctatg aatggcaaaa gaatgcctag cgatacacct gaaatgaaag
      601 ccatgctaac ttatatgcaa tggttatctc aaggagttcc agtaggagct aagatagaag
      661 ggcagggact taagaagata gattttatct caagagcagc tgatcctaaa aaaggtaagg
      721 caatttatat ggataaatgt gccgtttgtc atcaagaaaa tggcttaggg cttaaaaatg
      781 aggatagcgc aggggcgtat tatctttatc caccactttg gggtgatgat agttataata
      841 caggagctgg aatgtatcgt cttatcaaag ctgcttctta tattaaagaa aatatgcctc
      901 aaggtgcgcc tgacttaagt cttgaagatg cttatgatgt agcagcttac atgaattcac
      961 aagctcgccc tattaaagca aatagagata aagactttcc agatagaaag gttaagcctt
     1021 tagatatgga tgtaggacct tatgatgata gcttttttac aacccaacat cgctatggac
     1081 cttatacaaa tatgatcaaa aaataatttt aaggcaattt ttattgcctt aaaaatttat
     1141 tatttcatat tgcttaattt tttaactaga tcttctaaat cttgcattga attgattgcg
     1201 cttgggttaa tttgatattt tccattaaca acaaaagcag gggtgccata ggttttagct
     1261 atatcattag ctctttgaaa ctcgcttaaa atttctttag cttttggggt atttaaaaaa
     1321 tttaatactt catttttatt tacattcata gcctttaagc ctatgtcgta aaattcatct
     1381 aaatttgaaa aatttctttg cttgtttaaa aaataagaaa caaaataaac atcagcaagt
     1441 ttatgagata aactatcaga ataactcgca tctttaccat tttgctcatc tttgtattga
     1501 gcaaaggcaa aaagctcatt catttctttg gaaaattccc cattcattaa acttacagga
     1561 tagagtttaa aatgtaaatt tggaaaagct tctcttagtt tttcaagagt tccaaattta
     1621 tgatgattat aacaatgtat acatttataa gaaaatgctt ctattacact attttcagag
     1681 ttgggtaaac ttggattaag ggtaataaaa ctattatttg ctaatgcaaa acttgaacaa
     1741 aatacaagcg ttaaaacaaa tttgcaaaaa aatttacgca tattatatcc ttggttaaat
     1801 aaaattttca aagataattt tatttaaaaa aaataaataa gcccaaattt atttttgggc
     1861 ttattgttat tttttaagat tgaatgcttg atcaacacta aaaggcattg cttggtaacc
     1921 cgtgcctgaa ccgctaaatt gaatttgaac cgaaggttcc ttagcgcccc agttaaattc
     1981 atcaatttca ggttttggtt ccccaagact tacacctttg ctaagatcaa aagccattcc
     2041 agctgttgcg ctataaacca taatagaatc tttatctggt tcatattgag ttagagaagt
     2101 tacaggagaa aaccattcat ttccacgatt tttaccatat tcccaaattt gttccacagt
     2161 tttattttgc tgatcgattt tataaattac agcacgagaa tatttttgac ttgcaaatgc
     2221 aggttgttca gctcctcttg catcaccatt atcaaaaaca cttatataaa tataacgctt
     2281 gtttgattta ctatcaattc tccagcctgt atgttgcgtc caagtgaaat caaatccacc
     2341 attgtcattt tcataacctg ggcatttgct ataatcatca tcacaaacaa tttttttgcc
     2401 atttttatct acaggttgca ataaatattt ttgaaattct ttattccacc ctttatgtgc
     2461 tcctaaaatc cattttattt ttttatcacg accaatttta acaacagcac tttgatggcg
     2521 actagaaata ataatactgt catcacttgg atcataatca acgctattta catgagccca
     2581 attcctacct atacctgtac ctgctatatc tccaaatttg tcgctttcat ccattttggc
     2641 aagctcttca tcgcttaaag ttttacccgc tttgcttgca tctatattta aacacactgc
     2701 accttgatct aaagctttga taatggtact tctataagga tctaaaatct catacaatct
     2761 ccaatcatca acaacattac cattctcatc tacttctaca atagtatcac gcactgtgcg
     2821 tacatgctta ccatctggac gcaaagtatt tgctgaagct actcttaata aataatgccc
     2881 attttgcata ttgtccatag catgagaaaa atctatatag gcagcaggta atttgcgatt
     2941 gaaaatttct cttcctaaga tatcatattt tacatatctt tgaccaaatc cccaagttaa
     3001 agctccatct ttgttttgat gaaagcccat cataattcca cgattgtaaa tattatccca
     3061 gttcattagt ttatcgttat caaaatacca tctgatttca cccttagtat ctatgataaa
     3121 gacatttgaa ttttcatccc attccatagc accacctaca ggattattcc atacagattg
     3181 tgagcctttg ccagattgtt ttccaggagc attatttact aaatatagcc tatctgaaaa
     3241 ttttggatcc atttttaata ctttcacatt ttcaaaagga gttcctcttt gatcagtact
     3301 tccacttggt tctatgctaa cccctggagt tgtaatttta taaatctcat caatgacttt
     3361 ttgactttta ccatttgcag ttttagtata acttaccttt accgtattta aataagaagg
     3421 ataaagtcca aaaataggaa ttccaccgta agtcttagcc attttagaat tcacattata
     3481 agaaatagtt tgaccatttg gtttaggaac aatggttact tttatatcgc ttaagacata
     3541 accattgtcc ataataatag cggtcaaagg agacaatcca taaggattca ttttaatcgc
     3601 gcctatttgt ccttgaattt gccaatctat tttcgctcca ctaggaccac ccatggccat
     3661 taaaacatta ggtgcaagta gggtagaacc cgccaaaagt gccatgcaaa gagttttgct
     3721 aagtctcatg atcaatcctt taaaattatt taagccatcc taaaatagct taataaaatt
     3781 ttaataatac gcagcaaaaa taatttgttg cgtattttaa gagtatcttt aaacgacttg
     3841 atttaaatga tttaaactag ctatattttg atttggattt tttggttcgc ctataaattt
     3901 aagcactaaa accaaaataa caatcaccaa tgcaaaaatt ttagcattaa gtttattttt
     3961 atctaaaaca taggctataa acattgcaaa aagcacaata aaacaacata aaaatgctat
     4021 aagacagcaa attgccatat tcataaactt taaactagga atcaaatacc aaccattgct
     4081 ataaagccca ttttcaaaat caggtggagt tcctataaaa aatttttgaa aagcattaag
     4141 atgattataa gcattttctg gaactacagg ggtatccatc ccacattctc ctgttggcaa
     4201 aaaccaacta ggagcccact catgcaaagg taaattaaat ggataaatag gaatttcacg
     4261 acatccatct acacctgcaa aaggattttc agaatgaacc acttcatgaa tatgatttaa
     4321 agttagacaa tgctccaagc caagccaaat tccataaaaa gctaagctat aagaaaaaat
     4381 ttttataata ttatttgtag ggttgattaa tgcaatcata ccgcctatag ccataacaag
     4441 catatcaaat cttatataca cacattgttc acaaggttcc ataaaaagat attcttgaaa
     4501 taaaaaatgt gctatacaag taagtcctat agtaactata atcaaaatta accaaggttt
     4561 gcgcgtatct tgccatttag aaagtgaaaa ttttctgcaa ttatctttca tttttataca
     4621 actcattttt gtttgctaag ttctttagta atttcaatca aagcctctgg agagttgatt
     4681 gcacttggaa tgatttgata ttttccatta acaacaaaag caggggtgcc ataattttgc
     4741 gaaataggat tggcaatttc ataacttttt aaaagctctg cagcctctgg agtttttaag
     4801 aaattttcca aatcagcctt actcacattc attgctttta aaccgacact ataaaaagct
     4861 tcaggatttt taccattttc ccatctttgt tttttcttaa aatatgcatt aaaataagct
     4921 ttagcaactt tatgagttaa gctattttta tccgtaggat caattttatt tacaccatcc
     4981 ttaaatgccg caaaagcaaa aatttcatta gcttgccttc cataatctcc catagaactt
     5041 acaggataaa atttgtaagt taaattaggt aatttttctt taactttacc catggtatta
     5101 aatttgtgat gatcataaca atgagtacag cgataagaaa aaatttcaat caatgaatta
     5161 tcagcgttag caataggatt tttaagaatt atatattctt taccttcact taatgcacta
     5221 gcacttatac ctgctaaaaa agcacataca acaatagatc ttgctaattt tactggaaat
     5281 ttcattacct tctccttgaa atttggtttt gataaaactt tttattaagt ttttatgtaa
     5341 taaccattat a
//
LOCUS       DAPWGO010000090         5334 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.092, whole genome shotgun sequence.
ACCESSION   DAPWGO010000090 DAPWGO010000000
VERSION     DAPWGO010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5334
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.092"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..1242
                     /locus_tag="RJ336_001510"
     CDS             <1..1242
                     /locus_tag="RJ336_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HDZ5213943.1"
                     /translation="KNVNFYYRQILEKFENSYFAEDLTKVIIGIDCDYLDANELSFSE
                     FKAKYYEALSKNKICDFAGFFGVFSANFVSLFEKIPLSSKKNYDFPLFLFANAKAYLI
                     YEKNSKMFFKFGASKYFEYLKDDIEPIKTKQKNDFEILNSLEDEKNDFLKMCEKAKEY
                     LLSGDIFQVVLSKQLCIKHQVNAFDYYESLSTLNPSAYMFYFPSKYGVVLGSSPEFLL
                     KIKKREIYLAPIAGTRNLENNCDLLALEKDLLSDEKELSEHKMLVDLARNDASKFGTQ
                     TRVENLFSIIKNKFVMHIVSEVYANMKEDASIFDVIEAVFPAGTLSGAPKIRALEIIS
                     ELEDCDRGVYGGAVGFLNFNEDITLAILIRCAFFTQDKAYLASGAGIVLQSESQKEYA
                     EICAKRRALLVAFENLKKENQ"
     gene            1239..2840
                     /gene="trpD"
                     /locus_tag="RJ336_001511"
     CDS             1239..2840
                     /gene="trpD"
                     /locus_tag="RJ336_001511"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDZ5213944.1"
                     /translation="MILLIDNYDSFVFNVKSMLEQLSNDEILVRRNDEISLSEIKNLN
                     PTHIILSPGPKHPSQSGICLEIFKARLNIPVLGICLGHQALALAFDSLVVKMQEPMHA
                     KNSLIKQCRENELFSNLPLNFSVMRYHSLEVKQLSDELEILALDEKGVIMALGHKNLP
                     YYGVQFHPESYFSEYGLQLFSNFLKQDIKKSQKQENPLSFYLQKMSENHFLQSDDFEQ
                     ICKIIMSKDYEILQVAALLILITEKSLNEKSLSAFVRQILRYSQTFSDESEMIDICGT
                     GGDGFKSINVSTTSAFILAALGVKVAKHGNRAISSSSGSTDVLEALSITTPNTLESVL
                     KQLNNQGLSFLHAPFFHPLVGELKEIRSRLGVRTVFNVLGPLLHPNLKLKYQLMGNYH
                     APVHRLLIEVLKNLGRKKALVVRGNDGMDELSICDESKIYELCEGEILEYSICPEQFG
                     FKRAFHSEIIGSSAYDNAKDLKDILSGRMQGAKFDLVVLNAMFALYTANKASSPLVAK
                     DMILEAIYSGKVIEYFKEYQAYAKA"
     gene            2827..3426
                     /locus_tag="RJ336_001512"
     CDS             2827..3426
                     /locus_tag="RJ336_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HDZ5213945.1"
                     /translation="MLKLKICGIKDEKNAKDLAFLNIDFFGFIFAKSPRRVSLEQARN
                     LSAIFHEKDKKVVGVFVDENLEQILRCIKEAKLDGIQIYRTITKEEFEILKVQNVFVW
                     QVISVENSLDLKSEIFANLVLFDAKGILKGGNGISFDWTLLGSYTKDFILAGGIGLDN
                     VHKAVQTGAKILDLNSKLEDEKGLKDINKIKQILKELKK"
     gene            3423..4601
                     /gene="trpB"
                     /locus_tag="RJ336_001513"
     CDS             3423..4601
                     /gene="trpB"
                     /locus_tag="RJ336_001513"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDZ5213946.1"
                     /translation="MKKAYYGDFGGQFLPESAMFALNELEGAFLKFSKDKLFKKELNE
                     LLKTYVGRPTPLYFARNLSKKYQHEIYLKREDLNHTGAHKINNAIAQALLAKKMGKKK
                     IIAETGAGQHGLATATAAALLGLECEIYMGATDVQRQALNVYKMELLGAKIHAVQSGL
                     KTLKEATTAAIQAWVGDIKNIFYVVGSAVGPYPYPKMVMHFQSIIGKECKMQLQKLNK
                     KVDYIIAAVGGGSNAAGIFYDFIKDENVKLIGIEAGGLGIDTPYHAATLNKGKTGIIH
                     GMKTKVLQDDLGNILPVHSVSAGLDYPGIGPLHAFLFESKRAQYHAISDEECMQALKL
                     LCKEEGIIAAIESSHALAFLEKLCPTLKKKSVIVVNLSGRGDKDMQMIRDYKKGVIYG
                     "
     gene            4594..>5334
                     /locus_tag="RJ336_001514"
     CDS             4594..>5334
                     /locus_tag="RJ336_001514"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDZ5213947.1"
                     /translation="MVDFRKFYKENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILEL
                     GVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGL
                     EKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKH
                     AKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRKVA
                     DGVIVGTSIVKCFKQGNLDIIMKDIEEIF"
BASE COUNT         1876 a          588 c         1056 g         1814 t
ORIGIN      
        1 aaaaatgtaa atttttatta cagacaaatc cttgaaaaat ttgaaaattc ttattttgca
       61 gaggatttga ctaaggtaat tatagggatt gattgtgatt atttagatgc taatgaatta
      121 tcatttagcg agtttaaggc aaaatattat gaagctttaa gcaagaataa aatttgtgac
      181 tttgctggat tttttggagt ttttagtgcg aattttgtat ctttgtttga aaaaattcca
      241 ctttcttcta agaaaaatta tgattttcct ttatttttat ttgccaatgc taaagcttat
      301 ttgatttatg agaaaaatag caaaatgttt tttaaatttg gcgcttcaaa atattttgaa
      361 tatttaaaag atgatattga gccaataaaa acgaaacaaa aaaatgattt tgaaatttta
      421 aactctttag aagatgagaa aaatgatttt ttaaaaatgt gtgaaaaagc taaagaatat
      481 cttttaagtg gagatatttt tcaagtggtc ttaagtaagc aactttgcat caagcatcaa
      541 gtaaatgctt ttgactatta tgagagttta agtactttaa atccaagtgc ttatatgttt
      601 tattttccaa gcaaatatgg tgttgttttg ggttcttctc cagagttttt attaaaaatt
      661 aaaaaaagag agatttattt agcccctatt gcaggaacta gaaatttgga aaataactgt
      721 gatcttttag ctttagaaaa agatctttta agtgatgaaa aagaacttag tgaacataag
      781 atgcttgtag atttagcaag aaatgatgct tctaaatttg gcactcaaac aagagtggaa
      841 aatctttttt ctattattaa aaataaattt gtaatgcaca tagtgagtga agtgtatgcc
      901 aatatgaaag aagatgcgag tattttcgat gtgattgagg cagtttttcc agcgggaact
      961 ttaagcggag ctcctaaaat aagagcttta gagatcatta gtgagcttga ggattgcgat
     1021 cgtggagttt atggtggtgc ggtaggattt ttaaatttta acgaagacat aactttagcg
     1081 attttaattc gttgcgcttt ttttactcaa gataaggctt atttggcaag tggggcgggt
     1141 attgttttgc aaagtgagag tcaaaaagaa tatgcagaaa tttgtgctaa acgtagggcg
     1201 cttttggtag cttttgaaaa tttaaaaaag gaaaatcaat gatactttta attgataatt
     1261 atgattcttt tgtttttaat gttaaaagca tgttagagca actcagcaat gatgaaattt
     1321 tagtaagaag aaatgatgaa atttctctga gtgaaattaa aaatttaaat cctactcata
     1381 ttattttaag tcctggtcca aagcatccaa gtcaaagtgg gatttgtctt gaaattttta
     1441 aagcaaggct taatatccct gttttgggca tttgcttagg acatcaagct ttagctttag
     1501 cttttgattc tttagtggtt aagatgcaag agcctatgca tgcaaaaaat tctttgataa
     1561 aacagtgcag ggaaaatgaa ttattttcta atttaccttt aaattttagc gtgatgcgtt
     1621 atcattcttt agaggttaaa cagcttagtg atgagcttga aattttagcc cttgatgaaa
     1681 agggtgtgat tatggctttg ggacataaaa atttacctta ttatggtgtg caatttcatc
     1741 ctgaaagcta ttttagtgaa tatggcttac aacttttttc taatttttta aaacaagata
     1801 taaaaaaatc acaaaaacaa gaaaatcctt taagttttta tttgcaaaaa atgagtgaaa
     1861 atcatttttt acaaagcgat gattttgagc aaatttgtaa gattattatg tctaaagatt
     1921 atgaaatttt gcaagtggcg gctttgttga ttttaatcac tgaaaagtct ttaaacgaaa
     1981 aatctttaag tgcttttgta agacaaattt taagatattc tcaaactttt agtgatgaga
     2041 gtgagatgat tgatatttgt ggaacgggtg gagatggttt taaaagtatc aatgtttcta
     2101 cgactagtgc ttttatttta gcagctttag gagtaaaagt agccaaacac ggaaatcgtg
     2161 ccatttcaag ttctagtgga agtacagatg tgttagaagc tttaagtata actactccaa
     2221 atactttaga atcagtttta aaacaactaa ataatcaagg gcttagtttt ttacatgctc
     2281 cattttttca tcctttagta ggagaactta aagagatcag atcaagactt ggagtaagaa
     2341 cggtttttaa tgttttaggt cctttattgc accctaattt aaagttaaaa tatcaactta
     2401 tgggaaatta tcacgcacct gtgcataggc ttttgataga ggttttaaaa aatttaggac
     2461 gcaaaaaagc tttagtggta agaggaaatg atggtatgga tgagcttagt atttgcgatg
     2521 aaagtaaaat ttatgagctt tgtgaaggag aaattttaga gtattctatc tgtcctgaac
     2581 aatttggttt taaaagagct tttcatagtg aaatcatagg atctagtgca tatgacaacg
     2641 ctaaagattt aaaagatatt ttaagcggta gaatgcaagg ggcaaaattt gatttggtag
     2701 ttttaaatgc tatgtttgca ctttatacag ccaataaagc aagttcgcct ttagtggcta
     2761 aagatatgat tttagaagcc atttattcag gtaaggttat agaatatttt aaggagtatc
     2821 aagcttatgc taaagcttaa aatttgtggt attaaagatg aaaaaaatgc caaagattta
     2881 gcttttttaa atattgattt ttttggattt atttttgcta aaagtccaag aagagtgagt
     2941 ttagaacaag caagaaattt aagtgcaatt tttcatgaaa aagataaaaa agttgtcggt
     3001 gtttttgtag atgaaaattt ggaacaaatt ttaagatgta ttaaagaagc taagcttgat
     3061 gggatacaaa tttatcgcac tattaccaaa gaagaatttg aaattttaaa ggtgcaaaat
     3121 gtttttgttt ggcaggtgat tagcgtggaa aatagtttag atttaaaaag tgaaattttt
     3181 gctaatttag tactttttga tgctaaggga attttaaagg gcggtaatgg aataagtttt
     3241 gattggactt tattaggttc ttatactaaa gattttatat tagctggagg cataggtttg
     3301 gataatgttc ataaggctgt acaaacggga gctaaaattt tagatcttaa ttcaaaactt
     3361 gaagatgaaa aaggcttaaa agatatcaac aaaataaaac aaattttaaa ggagttgaaa
     3421 aaatgaaaaa agcgtattat ggggattttg gtgggcagtt tttgcctgaa agtgcaatgt
     3481 ttgctttaaa tgagctagaa ggtgcttttt tgaaattttc taaagataaa ctctttaaaa
     3541 aagaattaaa cgagctttta aaaacttatg tagggcgtcc tactccactt tattttgcta
     3601 gaaatttaag caaaaaatat cagcatgaaa tttatttaaa acgcgaggat ttaaatcata
     3661 ccggagcaca taaaatcaat aatgccatcg ctcaagccct tttagcaaaa aaaatgggaa
     3721 agaaaaaaat catagcagaa acaggagcag gtcaacacgg gcttgcaaca gccactgcag
     3781 cagcactttt aggacttgaa tgtgaaattt atatgggggc aaccgatgtg caaagacagg
     3841 ctttaaatgt ttataaaatg gagcttttgg gtgctaaaat tcatgcagta caaagtgggc
     3901 ttaaaactct aaaagaagct actactgcgg ctattcaagc ttgggttgga gatattaaaa
     3961 atatttttta tgtggttgga agtgcggtag gtccttatcc ttatcctaaa atggtaatgc
     4021 attttcaaag tattatagga aaagaatgca aaatgcaact tcaaaaactc aataaaaaag
     4081 tagattatat tatcgcagct gttgggggtg gaagcaatgc agctgggatt ttttatgatt
     4141 ttatcaaaga tgaaaatgtt aaacttatag gtattgaagc aggggggctt ggcattgata
     4201 cgccttatca tgcagcgact ttaaataagg gaaaaacagg cattattcac ggtatgaaaa
     4261 ccaaggtttt acaagatgat ttaggcaata tcttgcctgt acatagtgtt tctgcagggc
     4321 ttgattatcc aggaattggt cctttgcatg cttttttatt tgaaagcaaa agagcgcaat
     4381 atcatgctat aagtgatgaa gaatgtatgc aggctttaaa attactttgt aaagaagaag
     4441 gtattattgc agcgattgaa agttcgcatg ctttggcatt tttagaaaaa ctttgtccaa
     4501 ctttaaaaaa gaaaagcgtg atagtagtaa atctttcagg caggggagat aaagatatgc
     4561 aaatgattag agattataaa aaaggggtga tttatggttg attttagaaa attttataaa
     4621 gaaaatgcaa atgtggctta tacggtttta ggttatccaa atcttcaaac aagtgaagct
     4681 tttttgcaaa gattggatca aagccctatt gatattttag aacttggtgt tgcttatagt
     4741 gatcctattg ccgatggtga gattattgca gatgcggcaa aaatagctct tgatcaaggc
     4801 gtggatattc atagtgtttt tgagctttta gctaggataa aaactaaaaa agctttggtt
     4861 tttatggttt attataattt aattttttct tatggcttgg aaaaatttgt gaaaaaagca
     4921 aaatctttag ggatttgtgc tttgattgtg cctgaattga gttttgaaga aagtgatgat
     4981 ttaattaaag agtgtgaaag atataatata gctttaatta cacttgtaag tgttacaacc
     5041 cctaaagaaa gggttaaaaa gttagtaaaa catgctaaag gttttattta tttattagca
     5101 agcataggta ttacaggtac gaaaagtgtc gaagaagcaa tcttacaaga taaagtaaaa
     5161 gaaatcagat cttttacaaa tttgcctatt tttgtaggct ttggcattca aaataatcaa
     5221 gatgtaaaaa gaatgagaaa agttgctgat ggagtgattg tgggaactag catagtaaag
     5281 tgttttaaac aaggaaattt ggatataata atgaaagata ttgaagaaat tttc
//
LOCUS       DAPWGO010000091         5107 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.093, whole genome shotgun sequence.
ACCESSION   DAPWGO010000091 DAPWGO010000000
VERSION     DAPWGO010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5107
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.093"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(71..580)
                     /locus_tag="RJ336_001515"
     CDS             complement(71..580)
                     /locus_tag="RJ336_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 family protein"
                     /protein_id="HDZ5213948.1"
                     /translation="MHFTIFHIIAFIILLICFALICILIFLKVKQKEMALISYTIATI
                     FTALLIYSIFLTINQFTTQADLSKLTYTRDLRHESVIVSGKVQNLTKFEIRKCYLILS
                     ILNQKQVGGEIFNDKNVRNAKMQNTSVSYTIEIIDTLPGNTYKEFRANVPFPPSFNNP
                     EFYHTLKCI"
     gene            complement(580..1110)
                     /locus_tag="RJ336_001516"
     CDS             complement(580..1110)
                     /locus_tag="RJ336_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 domain-containing protein"
                     /protein_id="HDZ5213949.1"
                     /translation="MEKLREIVLFYTTHLYLVDYMLILLVFFLFTCVLLLCVFLRHRP
                     IAALFIIAFDIIICFLVYIYGYKLIDNEVRTRKTAITDQKMIQSSNDLIVDFNITNNS
                     KNNFKECKITAKIFADKIPNDNIIEEYKKKFIPFRQKSREIKDLKKNATQVQRIAFEN
                     FNYENNYTIRLVSECF"
     gene            complement(1123..2211)
                     /locus_tag="RJ336_001517"
     CDS             complement(1123..2211)
                     /locus_tag="RJ336_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HDZ5213950.1"
                     /translation="MPADLNDYFNKKNGNSNNNGNNNRQNFNFKAPEFNFKGFGKFSP
                     FVYGVIIIILFLIVAKPFMVINSGEMGIKSTTGKYDPNPLEPGLHFFLPFVQKITIID
                     TRVRQINYASIEGSNENLSSGSGVINKNSISVLDSRGLPVSIDVTVQYRLNPLQVPQT
                     IATWSLNWENKIIDPVVRDVVRSVVGKYTAEELPTNRNTIAAQIEEGIRKTIEAQPNE
                     PVELRAVQLREIILPSKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGEAN
                     ATIISAKGKAMAVKIEADAQAYSNKEIANSLNTPLLNLKQIETQKEFNEALKVNQDAK
                     IFLTPGGAVPNIWVDTKDAKKQSAANMN"
     gene            complement(2224..3138)
                     /gene="ilvE"
                     /locus_tag="RJ336_001518"
     CDS             complement(2224..3138)
                     /gene="ilvE"
                     /locus_tag="RJ336_001518"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HDZ5213951.1"
                     /translation="MISADKIWMDGKLVDFKDATLHFLTHSLHYGNAVFEGTRAYKTD
                     KGLAIFRLEDHTKRLLESAKITLLNCPFSQKDLENAQIELLKANNFQSNVYIRPLIFL
                     GDGVMGLYHIKAPVRVGIAAWEWGAYLGEEGLEKGIKVKISSFARNSVKSCMGKAKAS
                     ANYLNSQIAKFEAIEAGYEEALMLDEEGFIAEGTGECFFIVKDGVLITPPNDFSLKSI
                     TQDTVLKIAHDLGITVLRQRISRDEVYTADEAFFTGTAAEITPINNIDARIIGNGLRG
                     SVTKKLQDAYFDVVYGRNEKYASMLTYI"
     gene            3315..3521
                     /locus_tag="RJ336_001519"
     CDS             3315..3521
                     /locus_tag="RJ336_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HDZ5213952.1"
                     /translation="MPLVNIKLAKPSLSKEQKAELIADITELLSTKYNKSKERVVVVL
                     EDVENYDIGFGGESVEAIKAKANK"
     gene            3518..3973
                     /gene="bcp"
                     /locus_tag="RJ336_001520"
     CDS             3518..3973
                     /gene="bcp"
                     /locus_tag="RJ336_001520"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDZ5213953.1"
                     /translation="MSLNIGDKAPQFELLNQDGVKIALKDFIGKKVILYFYPKDNTPG
                     CTTEACDFSANYDKFGGKNAVIIGISPDSVTSHEKFISKFNLKHILLSDSEKEVVKAY
                     RAWGLKKNYGKEYEGIIRSTFVIDETGKIAQIYSNVRVKDHALKVLESL"
     gene            3973..5064
                     /locus_tag="RJ336_001521"
     CDS             3973..5064
                     /locus_tag="RJ336_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDZ5213954.1"
                     /translation="MLVHICCSVDSHYFIEELRKTYPDEKIIGYFYDPNIHPLSEYEL
                     RFLDVKRSCDKLGIKLYKGEYEYEKWLNAVRGYEDEPEKGARCEICFDVRMGSSVKFA
                     AKIGEKKLTTTLLTSPKKDLEQLKNALQKECEPYGVEFLAPDFRKNGGTQRQFALAKK
                     EMLYHQNYCGCIYGLKKQKQDKNFIDELMSSVNKQILPASIEARIALYKKVVLWEKKG
                     IKFEILREKFLNYRLLSALIKLDKKPVKSHILFYSHFKNAYTRFSLNEESLKQNLKEG
                     FYRSTKDEMVFVEFWRFNAFFKNKWKNFEDFLKRPLSVQAEIKWRNKLFGTYNLSPII
                     ILENILPSRYEVIAKSEIYHDNQEVLVEI"
BASE COUNT         1733 a          690 c          836 g         1848 t
ORIGIN      
        1 tagtggaatt attgttttgt tatgtgaata attaatgtat tttagaattt ttgctagttg
       61 atttcttgaa tcaaatacat tttaaggtgt gataaaattc aggattatta aaacttggag
      121 gaaaaggaac attagctcta aattctttat aggtattacc tgggagtgtg tctatgattt
      181 ctatagtata agaaacactt gtattttgca ttttagcgtt acggacattt ttatcattga
      241 aaatttctcc tcctacttgt ttttggttta atatgctaag tatcaaatag cattttctga
      301 tttcaaattt agtaagattt tgaacttttc cacttactat aacgctctca tgtcttagat
      361 ctcttgtgta ggttagtttg ctaagatcgg cttgagtggt gaattgattg attgtcagaa
      421 aaatagaata tatcaaaagt gcggtaaaaa tagtagctat ggtataagaa atcaaagcca
      481 tttctttctg tttgactttt agaaagatta aaatacaaat caaggcaaag caaataagta
      541 aaatgataaa agctataata tgaaaaatcg taaaatgcat taaaaacact ccgaaactaa
      601 gcgtatggta tagttatttt catagttaaa attttcaaaa gcaattcttt gaacttgggt
      661 tgcgtttttc tttagatctt taatttctct acttttttgt ctaaaaggga taaatttctt
      721 tttatattct tctatgatat tatcattagg tattttatct gcaaaaattt tagctgtaat
      781 tttacattct ttaaaattat tttttgaatt atttgtaatg ttaaaatcaa caattaaatc
      841 atttgagctt tgtatcattt tttgatctgt aatagcggtt tttcgagttc ttacttcatt
      901 gtctattagt ttatacccat agatataaac taaaaaacaa ataataatat caaatgcgat
      961 aataaaaagt gccgctatag gcctatggcg taaaaataca caaagaagta aaacacaagt
     1021 gaagagaaaa aaaactaata aaatcagcat ataatctact aaatataaat gagtagtgta
     1081 aaaaagcacg atttctctta gtttttccac ttgcgtatcc ttttagttca tgttggcagc
     1141 actttgcttt ttagcatctt tggtatcaac ccaaatgttt ggcactgctc cacctggagt
     1201 taagaaaatt ttagcatctt gattgacttt taaggcttca ttaaattctt tttgagtttc
     1261 aatttgtttt aaatttagca aaggggtgtt taagctgttt gcaatttctt tattagaata
     1321 agcttgtgca tctgcttcta tcttaacagc catagcttta cctttggcac tgattatggt
     1381 tgcatttgct tccccttcag ctaaagcagc tttttttaag gcttcttgat tagctctttc
     1441 tacttcatat ttagttcttt cagcctcttg ttttgcaatt tgcacgcgtt cgatttgttc
     1501 ttttactttt gaaggtaaaa taatttctct aagttgtaca gcgcgaagtt ctacaggttc
     1561 gtttggttgg gcttctatgg tttttcttat accttcttct atttgagcgg ctattgtatt
     1621 acgattagta ggaagttctt cggctgtata ttttcctaca acacttcgca ctacatcacg
     1681 aacaactgga tcgataattt tattttccca atttaagctc caagtagcta tggtttgagg
     1741 aacttgcaaa ggatttaaac ggtattgtac tgtaacatca atagatacag gcaatccacg
     1801 agaatcaagt acagaaatac tatttttatt aataacacct gaacctgaag ataaattttc
     1861 attacttccc tctatagaag catagttgat ttgtcttact ctagtatcga ttatggttat
     1921 tttttgtaca aaaggtaaga aaaagtgaag tcctggttct aatggatttg ggtcatattt
     1981 acctgttgtt gatttaatcc ccatttcccc agaatttatc accataaaag gttttgcaac
     2041 gattaaaaat aagataataa taatcacccc ataaacaaat ggagagaatt tcccaaaacc
     2101 tttaaaatta aattctggtg ctttgaaatt gaaattttga cggttgttgt ttccgttatt
     2161 gttagaattt ccattttttt tattgaaata atcattcaaa tcagctggca tttatttcct
     2221 tttttaaata taagttagca tagatgcgta tttttcattg cgtccataaa ctacatcaaa
     2281 ataagcatct tgaagttttt tagttacaga tcctcttaaa ccatttccta ttattcttgc
     2341 atcaatattg ttaataggtg tgatttcagc ggctgttccg gtaaaaaatg cttcatcagc
     2401 agtataaact tcatctcttg aaattctttg gcgaagcacg gtgataccaa gatcatgagc
     2461 gattttaagc actgtatctt gagtaatgct ttttaaagaa aaatcatttg gaggtgtgat
     2521 taaaacccca tcttttacaa taaagaaaca ttctcctgtt ccttctgcga taaaaccttc
     2581 ttcatcaagc attaaagctt cttcatatcc tgcttcaata gcttcaaatt ttgcaatttg
     2641 agagttaaga taatttgcac ttgctttagc ttttcccatg catgatttaa cactatttct
     2701 tgcaaaagac gaaattttta cttttatgcc tttttctaaa ccttcttctc caaggtaagc
     2761 accccattcc caagctgcaa ttccaactct tacaggagct tttatatgat aaagtcccat
     2821 aactccatcg cctaagaaaa tcagagggcg gatatagaca ttgctttgaa aattgtttgc
     2881 ttttaagagt tcaatttgtg cattttcaag atctttttga gaaaaaggac aatttaaaag
     2941 agtaattttt gcagactcta aaagtctttt ggtgtgatct tcaagtctga aaattgctaa
     3001 gcctttatct gttttatagg ctctagttcc ttcaaaaaca gcattgccat aatgcaaaga
     3061 atgggttaaa aagtgcaaag ttgcatcttt aaaatcaact aattttccat ccatccaaat
     3121 tttatctgct gagatcattt ttttaccttt tatagttgtt tatttcttaa aaaatattat
     3181 tttaagaata aatcgggatt ttatcaaaaa tatactaaca ataagctttt attaaattaa
     3241 ggttttttgt taaaaaaaat attaggtatt ttttgaaata attatgaaaa attatcgtta
     3301 aaaaaggaga aattatgcca ttagtaaata tcaaattagc aaagccgtct ttaagcaagg
     3361 agcaaaaagc ggaacttata gctgatatta ctgaactttt aagcacgaaa tataataaaa
     3421 gtaaagaaag agttgttgtg gttttagaag atgtggaaaa ttatgacata ggctttggcg
     3481 gagaaagtgt agaagctatc aaagcaaagg caaataaatg agtttaaata taggagataa
     3541 ggcacctcaa tttgagcttt taaatcaaga tggggtaaaa atagcattaa aagattttat
     3601 tggcaaaaag gtgattttgt atttttatcc aaaagataat accccaggtt gtactacaga
     3661 agcttgtgat tttagtgcaa attatgataa atttggtggt aaaaatgcag tgattattgg
     3721 tattagtcct gatagtgtga caagtcatga aaaatttatt tctaaattta atttaaagca
     3781 tattttactt agtgatagcg aaaaagaagt tgttaaagct tatagagctt gggggcttaa
     3841 gaaaaattac ggaaaagaat atgaaggcat cattcgttct acttttgtta tcgatgaaac
     3901 aggtaagatt gctcaaattt atagtaatgt tcgtgtaaaa gatcatgctt taaaagtgct
     3961 tgaaagtctt taatgctggt gcatatttgt tgtagtgtag atagtcatta ttttattgaa
     4021 gaacttagaa agacttatcc tgatgaaaaa atcataggat atttttatga tccaaatatc
     4081 catcctttaa gcgaatacga actaagattt ttagatgtaa aaagatcttg tgataaactt
     4141 ggcatcaagc tttataaagg tgagtatgag tatgaaaaat ggcttaatgc tgtgcgtggt
     4201 tatgaagatg agcctgaaaa aggtgcaagg tgtgaaattt gctttgatgt aagaatggga
     4261 tctagtgtta aatttgctgc taaaatagga gaaaaaaagc ttactactac gcttttaacc
     4321 agccctaaaa aagatttaga acagttaaaa aatgctttac aaaaagaatg tgagccttat
     4381 ggggtggagt ttttagctcc tgattttcgt aaaaatggtg gcactcaaag gcagtttgct
     4441 ttagcaaaaa aagaaatgct ctatcatcaa aactattgtg gttgtattta tgggcttaaa
     4501 aaacaaaaac aagataagaa tttcattgat gaattaatgt cttctgtaaa taagcaaatt
     4561 ttacctgcaa gtatagaagc aagaatagct ctttataaaa aagtagtttt atgggaaaaa
     4621 aagggtataa aatttgaaat tttaagagag aaatttttaa attatcgtct tttaagcgct
     4681 ttgataaaat tagataaaaa gcctgttaaa tctcatattt tattttattc gcattttaaa
     4741 aacgcttata caagattttc tttaaatgaa gaaagcttaa aacagaattt aaaagaaggt
     4801 ttttatagaa gcaccaaaga tgaaatggtt tttgtagaat tttggcgttt taatgcattt
     4861 tttaaaaata aatggaaaaa ttttgaagat tttttaaaaa gacctttgag tgtgcaagca
     4921 gaaattaaat ggcgcaataa attgtttgga acttataatc ttagccctat tatcatcctt
     4981 gaaaatattt taccttcaag atatgaagtg atagcaaaaa gtgaaattta tcatgataat
     5041 caagaggtgc ttgtagaaat ttaagaaatt tattaagaaa aacttttttt gttaatgtaa
     5101 tttttaa
//
LOCUS       DAPWGO010000092         5090 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.094, whole genome shotgun sequence.
ACCESSION   DAPWGO010000092 DAPWGO010000000
VERSION     DAPWGO010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5090
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.094"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..409)
                     /locus_tag="RJ336_001522"
     CDS             complement(<1..409)
                     /locus_tag="RJ336_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDZ5213955.1"
                     /translation="MMDLKEIAQFLDDNVPAFLATLGTCGNPRVRPIQSPLLVRDKIY
                     FCTANTKGLFKHIKNYNGIEFCSCAKDGTFLRFRANAVFEPNLEVKKMMFEKYPYLVN
                     LYETPQNPKFEVFYLDHLSARMQFMNGEFKLFKA"
     gene            complement(416..1159)
                     /gene="fabG"
                     /locus_tag="RJ336_001523"
     CDS             complement(416..1159)
                     /gene="fabG"
                     /locus_tag="RJ336_001523"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDZ5213956.1"
                     /translation="MKFSGKNVLITGASKGIGASIAKTLAGFGLKVWINYRSKPELAD
                     ALKDEIIASGGVAAVIKFDASKEDEFENGVKTIVESDGELGYLVNNAGVTNDKLALRM
                     KLEDFSSVVDTNLSSAFLGCREALKTMSKKRFGAVVNIASIVGEMGNAGQVNYSASKG
                     GMIAMTKSFAKEGASRNLRFNCVTPGFIKSDMTEVLSDEIKQTYQDNIPLKRFAEPEE
                     VANCVAFLLSDYASYVTGDVLKINGGLYM"
     gene            complement(1231..2709)
                     /locus_tag="RJ336_001524"
     CDS             complement(1231..2709)
                     /locus_tag="RJ336_001524"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HDZ5213957.1"
                     /translation="MKQKCVLIITDGIGYNKNSKFNAFEAAKKPSYEKLFKEVPNSLL
                     KTSGLAVGLPEGQMGNSEVGHMCIGSGRIIYQNLVRINKAIENKELEKNENLQKLLAK
                     CKRVHIIGLYSDGGVHSMDTHFKAMLEICAKNGNEVFAHAITDGRDVSPKSGLNFIKD
                     LKEFCENLGVHFATLCGRFYAMDRDKRWDRVKEYYECLLGKAYKVPNLLEYLQKSYDE
                     NVTDEFIKAAQNENYKGMREEDGIIFINFRNDRMKQLVEVLNSKDFKEFEREKIFENL
                     LTMSVYDDKFKLPVLFEKEKIENTLAQVISKAGLSQLHTAETEKYAHVTFFFNGGKEE
                     LLENETRVLIPSPKVKTYDEKPQMSAFEVCDAVKKGIEKGEDFIVVNFANGDMVGHTG
                     DFNAAIKAVEAVDTCLGEIVECAKKHDYAFIITSDHGNCEAMQDEKGNLLTNHTTFDV
                     FVFVQAKGVSKIKDNMGLSNIAASVLKILDLEIPKEMNEALF"
     gene            2789..3850
                     /locus_tag="RJ336_001525"
     CDS             2789..3850
                     /locus_tag="RJ336_001525"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDZ5213958.1"
                     /translation="MYYLSDLSHYAFFTYISVRAGFAFFIALCLSLFLMPKFITWAKA
                     KNASQPIYEYAPETHKTKCHTPTMGGLIFISSAVIASLFCIKFDNIFAISALLCLILF
                     CLIGLIDDLGKVLKKDNHSGLSPRMKLLAQIIAGLICILPLYFSSELSTELFIPFYKH
                     PLFDMEIFAIVFWILVLISSSNAVNLTDGLDGLATVPSIFSLSTLGIFLYLSGNLNYS
                     EYLLLPKIQGLGEVVIICAALIGALMGFLWYNCYPAQVFMGDSGSLALGGFIGFLAII
                     SKNEILLLLIGFVFVLETVSVILQVGSFKIFNKRVFKMAPIHHHFEKVGWVENKIIVR
                     FWMIALLSNLLALASIKLR"
     gene            3850..5058
                     /locus_tag="RJ336_001526"
     CDS             3850..5058
                     /locus_tag="RJ336_001526"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDZ5213959.1"
                     /translation="MKISLFGYGKTTRAIAENLVDKFGPFDIYDDHFTETKKDTLGNL
                     LLNPNDFDDNLSDIEIPSPGFPPKHKLIQKAKNLQSEYDFFYDIMPKSVWISGTNGKT
                     TTTQMATHLLSHIGAVIGGNVGTPLAELDPYAKLWILETSSFTLHYTHKAKPEIYALL
                     PISPDHLSWHGSFDNYVQDKLSVLKRMNECDVVILPKIYANTPTKAHKISYKDEKDLA
                     VKFGIDTEKISFKSPFLLDAIMALAIEKILLDTLSYELLNSFVMEKNKLEELKDSQNR
                     LWVNDTKATNESAVMAALNRYKDKKIHLIIGGDDKGVDLSNLFDFMKNFNIELYAIGI
                     STEKMLDYAKKANLKAYKCEVLSKAVNEISNHLRVNEVALLSPACASLDQFNSYVERG
                     KVFKECVNKI"
BASE COUNT         1652 a          926 c          701 g         1811 t
ORIGIN      
        1 aagccttaaa aagcttaaat tctccattca taaattgcat tctagcgctt aaatgatcaa
       61 gataaaaaac ttcaaatttt ggattttgcg gagtttcata aagatttaca agataaggat
      121 atttttcaaa catcattttt ttaacttcta aatttggttc aaaaaccgca ttagccctaa
      181 atcttaaaaa agtcccatct tttgcacaag aacaaaattc aataccatta taatttttta
      241 tatgcttaaa aagtcctttt gtatttgctg tgcaaaaata aattttatct ctcacaagca
      301 atggactttg tataggacgc actctaggat ttccacaagt tcctaaagtg gctaaaaatg
      361 ctggtacatt atcatctaaa aattgtgcta tttcttttaa atccatcatt tttccttaca
      421 tatataaacc accattgatc ttaagcacat cgcctgtcac ataagaggca taatcactaa
      481 gtaaaaacgc tacacaatta gccacttctt caggttctgc aaagcgtttt aaagggatat
      541 tgtcttgata ggtttgtttg atttcatcac ttaaaacttc agtcatatcg ctttttatga
      601 aacctggagt tacacagtta aagcgtaaat ttctacttgc tccttcttta gcaaaagatt
      661 tagtcatagc tatcattcca cctttactgg cagaataatt tacttgtcca gcattgccca
      721 tttctccgac aatagaagcg atatttacaa cagcaccaaa gcgtttttta ctcatggttt
      781 ttaaagcttc tctacaacct aaaaaagctg aacttaaatt tgtatccaca acactgctaa
      841 agtcctctaa tttcattctt aaagcaagtt tatcatttgt aacgcctgcg ttatttacaa
      901 gataacctaa ctctccatcg ctctccacta tggtttttac accattttca aactcatctt
      961 ctttgcttgc atcaaattta atcacagcag caacgccacc acttgcaata atttcatctt
     1021 ttaaagcatc tgcaagttca ggttttgaac gataattgat ccaaacttta agtccaaaac
     1081 ccgccaaagt ttttgcaata gaagcaccta ttcccttact tgctccggta attaaaacat
     1141 tttttccgct aaatttcatt atctatcctt aataagttta attttaaaaa ttgcaatctt
     1201 aacaaatttc ttataaaaaa ggcaaacaaa ctaaaacaaa gcctcattca tttcttttgg
     1261 aatttctaag tctaaaattt taagcacact tgcagcgata ttgctaagcc ccatattatc
     1321 tttaatcttt gaaactccct ttgcttgcac aaaaacaaaa acatcaaaag tagtgtgatt
     1381 ggtaagcaaa tttccttttt catcttgcat agcttcgcaa tttccatgat cgcttgtaat
     1441 gataaaagca taatcatgct tttttgcaca ttctacaatc tcgcccaaac aagtatccac
     1501 cgcttcaaca gcctttatag cagcattaaa atcacctgta tgcccaacca tatctccatt
     1561 tgcaaaattt accactataa aatcctcacc cttttctatg ccttttttca ctgcatcaca
     1621 cacttcaaaa gcactcattt ggggtttttc atcataagtt tttaccttgg ggcttgggat
     1681 taaaaccctt gtttcatttt ctaaaagctc ttcttttccg ccattaaaaa agaaagttac
     1741 atgggcatat ttttcggttt ctgcggtatg aagctgacta agccctgctt tagaaatcac
     1801 ttgggctaaa gtattttcaa ttttttcttt ttcaaaaagc acagggagtt taaatttatc
     1861 atcataaaca ctcatagtaa gtaaattttc aaagattttt tcgcgttcaa actctttaaa
     1921 atccttagaa tttaacactt caacaagttg tttcattcta tcatttctaa aattgataaa
     1981 gataatgcca tcttcttctc tcatgccctt gtaattctca ttttgagctg ctttgataaa
     2041 ctcatcagta acattttcat cgtaagattt ttgtaggtat tctaataaat ttggcacttt
     2101 ataagcctta cctaacaagc actcataata ctcttttacc ctatcccaac gcttatctct
     2161 atccatagca taaaaacgcc cacaaagcgt agcaaaatgc acgcctaagt tttcacaaaa
     2221 ttcttttaaa tcttttatga aatttaagcc actttttgga cttacatcac gcccatcagt
     2281 gattgcgtga gcaaaaactt cattgccatt tttcgcacaa atttcaagca tggctttaaa
     2341 atgcgtatcc atagaatgca ccccgccatc actataaagc cctataatat gcactctttt
     2401 acattttgct aaaagttttt gtaaattctc atttttttca agttctttgt tttcaatggc
     2461 tttattaata cgcactaaat tttgataaat aatacgccca cttcctatac acatatgccc
     2521 tacttcacta tttcccatct gcccttctgg caaacctaca gctaaaccac tcgtttttag
     2581 taaagaattt gggacttcct taaaaagctt ttcataactt ggttttttag ctgcttcaaa
     2641 agcattaaac ttactattct tattataccc tattccatct gtaataatta aaacgcattt
     2701 ttgcttcatt tttctctctt ttataagaat ttttttggtt agattttact aaaattaaac
     2761 ttttaaaaac caaaaagaag gctaggtttt gtattatctt tcagatttaa gtcattatgc
     2821 tttttttact tatattagtg tgcgtgcagg atttgcattt tttatcgctt tatgtttatc
     2881 tttattttta atgcctaaat ttattacttg ggcaaaagct aaaaatgcta gtcaacctat
     2941 ttacgaatac gccccagaaa ctcataaaac caaatgccat actccaacca tgggtgggct
     3001 tattttcatc agttctgcag taatcgcaag tttattttgt atcaaatttg ataatatttt
     3061 tgctataagt gctttacttt gtttgatact tttttgttta ataggactca tagatgattt
     3121 aggcaaagtt ctaaaaaaag ataatcattc aggacttagt ccaagaatga agcttttagc
     3181 acaaatcatc gctggactta tttgcatctt acctttatat tttagttcag agcttagcac
     3241 ggaacttttt ataccttttt acaaacaccc tctttttgat atggaaattt ttgccattgt
     3301 tttttggatt ttggttttaa tttctagctc taatgctgta aatttaaccg atggacttga
     3361 tggcttagct acagttccaa gtattttttc tttatctact ttagggatat tcttatattt
     3421 gagcggaaat ttaaattata gtgaatattt acttttgcca aaaattcaag gacttggtga
     3481 agtagtgatt atttgtgctg cattaatcgg tgctttaatg ggatttttat ggtacaactg
     3541 ttatcctgcg caggttttta tgggggatag cgggagttta gctttaggtg gattcatagg
     3601 atttttagct atcattagca aaaatgaaat tttactttta ctcataggtt ttgtttttgt
     3661 tcttgaaact gtttctgtaa ttttacaagt tggaagtttt aaaattttta ataaaagagt
     3721 atttaaaatg gcacctattc atcatcattt tgaaaaagtt ggctgggtag aaaataaaat
     3781 tatagtgcgt ttttggatga tagccttact ttcaaattta cttgcacttg catcaataaa
     3841 gctaagataa tgaaaatttc actttttgga tacggaaaaa ccacacgcgc tattgctgaa
     3901 aatttggtag ataaatttgg gccttttgat atctatgatg atcattttac agaaacaaaa
     3961 aaagatacac taggaaattt acttttaaat cctaatgatt ttgatgataa tttaagcgat
     4021 attgaaattc ctagtccagg ttttccacca aagcacaaac tcattcaaaa agcaaaaaat
     4081 ttacaaagcg aatatgactt tttttatgat atcatgccaa aatccgtttg gataagcgga
     4141 accaatggca aaactactac cactcaaatg gctacacatt tattatcaca cattggtgct
     4201 gttataggtg gaaatgttgg aactccttta gcagagcttg atccttatgc aaaactttgg
     4261 atacttgaaa cttcatcttt caccctacac tacactcata aagctaaacc tgaaatttat
     4321 gcacttttac ctataagtcc tgatcatctt tcttggcatg gaagttttga taattatgtt
     4381 caagataagc taagcgtttt aaaaagaatg aatgaatgcg atgtagtaat actgcctaaa
     4441 atttatgcaa atactccaac aaaagctcat aaaataagct ataaagatga aaaagatcta
     4501 gctgttaaat ttggcattga tacggaaaaa atttccttta aaagtccttt tttactcgat
     4561 gctatcatgg ctttagctat agaaaaaatt ctacttgata ctttaagcta tgagctttta
     4621 aatagctttg taatggaaaa aaataaactt gaagagctta aagacagtca aaatagactt
     4681 tgggtaaatg acactaaagc cacaaatgaa agcgcggtaa tggctgcact taatcgctat
     4741 aaagataaaa aaatccatct tatcataggg ggagatgata agggtgtaga tcttagcaat
     4801 ttatttgatt ttatgaaaaa ttttaacata gaactctatg ctataggtat tagtaccgaa
     4861 aaaatgcttg attatgcaaa aaaagcgaat ttgaaagcct ataaatgtga agttttatct
     4921 aaagctgtaa atgaaatttc aaatcactta agagtcaatg aagtggctct tttaagtccc
     4981 gcttgcgcaa gtttagatca gttcaactct tacgtagagc gtggaaaagt ctttaaagaa
     5041 tgtgtgaata aaatttaatt tattatacaa tccatacaaa tatattaaac
//
LOCUS       DAPWGO010000093         5035 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.095, whole genome shotgun sequence.
ACCESSION   DAPWGO010000093 DAPWGO010000000
VERSION     DAPWGO010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5035
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.095"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            35..643
                     /gene="plsY"
                     /locus_tag="RJ336_001527"
     CDS             35..643
                     /gene="plsY"
                     /locus_tag="RJ336_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDZ5213960.1"
                     /translation="MENLIIYAFIYLLGSIPFGLILAKFFAKTDIKKEGSKSIGATNV
                     LRVVKEKNPKLAKKLAIATIILDFAKAAIPLLILKFLHYDQALLWSVAVLAIFGHCFS
                     IYLLFEGGKGIATGAGAMIVLLPLEVLTAFIVWVVIGKIFKISSLASLAALLAFVISS
                     FIFNYDLEIHTHAPVFIIAFIIVYKHLPNIKRLIFKEECKVI"
     gene            628..945
                     /locus_tag="RJ336_001528"
     CDS             628..945
                     /locus_tag="RJ336_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDZ5213961.1"
                     /translation="MQSHIKIKFHFKCIIGILDFERRKKQKIIIKLKAKANEFLNYAE
                     VITKIKTWYKKEEFYTLEESLDFVSLNLKKDFPNLTNLNIKIFKPHIIKNATVGVKFK
                     KKY"
     gene            1024..1695
                     /gene="hsrA"
                     /locus_tag="RJ336_001529"
     CDS             1024..1695
                     /gene="hsrA"
                     /locus_tag="RJ336_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homeostatic response regulator transcription
                     factor HsrA"
                     /protein_id="HDZ5213962.1"
                     /translation="MRILVIEDEISLNKTIIDNLNEFGYQTDSSENFKDGEYFIGIRH
                     YDLVLANWTLPDGDGAELVNTIKHKSPRTSVMIMSSKTDKETEIKALKAGADDFVKKP
                     LDFDILLARIEARLRLGGTNVIKIEDLVIDPDEEKITYKGQDIELKGKPFEVLTHLAR
                     HSDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDKPLNISTIETVRRRGYRFC
                     FPKKS"
     gene            1808..2053
                     /locus_tag="RJ336_001530"
     CDS             1808..2053
                     /locus_tag="RJ336_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HDZ5213963.1"
                     /translation="MSLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECVND
                     FSEPACIVACPYECIIPDPDNVETIEELKLKHRDREF"
     gene            2053..3513
                     /locus_tag="RJ336_001531"
     CDS             2053..3513
                     /locus_tag="RJ336_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HDZ5213964.1"
                     /translation="MAKKTAVVDLGSNSIRMVIFEKTSRYGFYTTCEYKRKVRLGENA
                     YNNGKILQEEAMQRAEDALAFFKQCALKHKCKKIFIVGTSALRDAPNSKNFIKRIKDN
                     LSLNIRCIDGKSESYLGGLAALNLLSPFKDGTTLDIGGGSSELCLIKNNRIISCISLD
                     IGTVRLKELFYDTGKMDSLEEFIKPILEQIPKEFCNQNLIAIGGSLRAISNSIMQKNS
                     YPLKNLHDFRYMLDEEKGHILKIFNSNLDSLINFGIKKDRFDTIKEGIFIFLKIAEKI
                     KAKQVITSGVGIREGVYLQDLLRPKITFPPNFNPSLKCLQDKFLQSKQKNKTPHFALQ
                     IFTTLKNLHKLNDNYKHTLLNAAKLCHIGEYLNFYFANEHSAHFVLGGLNYGFSHKEK
                     ALIASIIKLNGKKVNPYNLEPYKQLLPNIHTISWLNFILCLAKTLSTNEDKIDFAFAN
                     NTLYIYQENKILNLPKDELKKIAKPATIALAINQKI"
     gene            complement(3510..4307)
                     /locus_tag="RJ336_001532"
     CDS             complement(3510..4307)
                     /locus_tag="RJ336_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213965.1"
                     /translation="MRLLVLFFLILPLYSVELISFNIYDRNDRVDLMLSFDNAYNGKI
                     SQKKEKNLTLLTFSDLTYSKDELKELNSQLVDKISISSKNNNTYIMLQNKQNINLELS
                     SINDKFGVRIRAIEQGKANIESVPTTTANNSQELMPKPKSTSLEGYDYTNYILVMLIL
                     VILLIVLWWFKKTMVYKNNNVSRDFTMIFQRFLDKNNQLVVFDHANKRYTMIIGNSNV
                     LLESVEIPEEQIIKHTEKTEKNFDSFFEENKKRIQNLIEQRQKGKKS"
     gene            complement(4308..4616)
                     /gene="fliN"
                     /locus_tag="RJ336_001533"
     CDS             complement(4308..4616)
                     /gene="fliN"
                     /locus_tag="RJ336_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HDZ5213966.1"
                     /translation="MSDDIEFNIHHGLLQSYEDILDITVDFVSELGTTNMSVAELLKL
                     EVGSVIDLEKPAGESVELYINKRIFGKGEVMVYEKNLAIRINEILDSKTVLQYFKKEI
                     "
     gene            complement(4616..>5035)
                     /locus_tag="RJ336_001534"
     CDS             complement(4616..>5035)
                     /locus_tag="RJ336_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HDZ5213967.1"
                     /translation="LKILEYSITHFCEHILRLRIEAAQDISGELYGASIPIMGKSEGE
                     CNFYLFFPKEFLKKIAEILINDEKFKEDDWCDLTKECANQIIGYAKNLLNDAKGDDEY
                     KLGIPEYLGKVDFSEIVLDEALTYKFENCYFRIGYCK"
BASE COUNT         1840 a          747 c          684 g         1764 t
ORIGIN      
        1 tcttaaaatt ttaagatgat ttgaaaagga tattatggaa aatttaataa tttacgcttt
       61 tatatatctt ttaggttcaa tcccttttgg gctaatccta gctaaatttt ttgctaaaac
      121 tgatatcaaa aaagaaggtt caaaaagtat aggagcaacc aatgttttaa gagtagtaaa
      181 agaaaaaaat cccaaactag caaaaaaact tgccattgct acaataattt tagattttgc
      241 aaaagcagct attcctttac taatcttgaa atttcttcat tatgatcaag ctttgctttg
      301 gagcgtcgca gttttggcta tttttggaca ctgtttttca atttacttgt tatttgaagg
      361 agggaaaggc atagcaacag gagcaggcgc tatgatagtt ttacttccat tggaagtgct
      421 tacagcattt attgtgtggg tagttattgg aaaaattttt aaaatatctt cgctagcttc
      481 tttagcagcg ttacttgctt ttgttataag ttcttttata tttaattatg acttagaaat
      541 tcatacacat gcacccgttt tcattatcgc ttttattata gtatataaac atctacctaa
      601 tattaaaaga ttgattttta aagaagaatg caaagtcata taaaaataaa atttcacttt
      661 aagtgtatca ttggtatatt agatttcgaa agaagaaaaa aacaaaaaat tattatcaag
      721 cttaaagcta aagcaaatga atttttaaat tatgcagagg taattaccaa aattaaaaca
      781 tggtataaaa aagaagaatt ttacaccctt gaagagtctt tagactttgt aagcttaaat
      841 ttaaaaaaag attttcctaa tttaaccaat cttaacataa aaattttcaa accccatata
      901 ataaaaaatg ctacagttgg ggttaaattt aaaaaaaaat attaattttt ttttaaagat
      961 atctaaacat ttacttaagc tatgatataa ttctttaaat ttttcttaat aaggatagaa
     1021 caaatgagaa ttttagttat agaagatgag attagcctaa ataaaacaat tatagacaat
     1081 cttaatgaat ttggttatca aactgattct tctgaaaatt ttaaagatgg agaatacttt
     1141 atcggcatta gacattatga tttagtttta gcaaactgga ctttacctga tggagatgga
     1201 gcggaacttg ttaacactat taagcataaa tctccaagaa cttcggttat gattatgtct
     1261 tcaaaaacag acaaagaaac agaaatcaaa gctttgaaag ctggagctga tgattttgtt
     1321 aaaaaacctt tagattttga tattctactc gcaagaattg aagcaagact aagacttggc
     1381 ggaaccaatg ttattaaaat tgaagactta gttattgatc cagatgagga aaaaattact
     1441 tataaaggtc aagatataga acttaaagga aaaccttttg aagttttaac gcacttagca
     1501 agacattcgg atcaaattgt atccaaagaa caacttttag atgccatctg ggaagaacct
     1561 gagctagtaa ctccaaatgt tatcgaagta gctatcaatc aaattcgtca aaaaatggat
     1621 aaaccattaa atatatctac catagaaaca gttcgtcgta gaggataccg tttctgcttc
     1681 cctaaaaaat cttaacaatt ttgcaccttc ggtgcaaaaa atttatcttt atttctattt
     1741 ttatatttta tttaagtttg gttattgtat aaactaaaat tattttttaa atttttgaaa
     1801 ggttatgatg tctcttttaa ttacaaaaga ctgcgtatgt tgtgatgctt gcagagaaga
     1861 atgtcctgat gaagctattt atgaaaatag tccaatttat gtaatagacc ctgatctttg
     1921 ttcagagtgc gttaatgatt tttcagagcc tgcctgtatt gttgcttgcc catatgaatg
     1981 tatcattcct gatcctgata atgtagaaac tatagaagaa ttaaaactca aacatagaga
     2041 tagagaattt taatggcaaa aaaaacagcc gttgttgatc ttggctcaaa ctccattaga
     2101 atggtgattt ttgaaaaaac ttctagatat ggtttttata caacttgcga atacaaacgc
     2161 aaagtaagac ttggagaaaa tgcttataat aatggcaaaa ttctccaaga agaagccatg
     2221 caaagagccg aagatgcctt agcttttttc aaacaatgcg ctttaaagca taagtgcaaa
     2281 aaaatattta tagtaggcac atcagcctta agagatgccc caaattcaaa aaatttcatt
     2341 aaaagaatca aagataatct gtctttaaat atacgctgta tagatggaaa aagcgaaagt
     2401 tacttaggtg gtcttgcagc tctaaattta ttaagtcctt ttaaagatgg aaccacttta
     2461 gacataggtg gtggttctag tgaattgtgt ttaataaaaa ataatagaat tatttcttgc
     2521 atatctcttg atattggcac tgttaggcta aaagaattgt tctatgatac tggaaaaatg
     2581 gattctttag aagaatttat aaaaccaatt ttagaacaaa ttcctaaaga attttgcaat
     2641 caaaacctta ttgcaatagg tggaagctta agagcaatat ctaattccat catgcaaaaa
     2701 aattcctatc cactgaaaaa tttacatgat tttcgctata tgctagatga agaaaaaggg
     2761 catattttaa aaatttttaa ttcaaactta gactctttaa tcaattttgg cataaaaaag
     2821 gatcgttttg ataccattaa agagggtata tttatttttt taaagattgc ggaaaaaata
     2881 aaagccaaac aagttatcac gagtggggtt ggaatcagag aaggagttta tttgcaagat
     2941 ttacttcgtc ctaaaatcac ttttccacca aattttaatc ctagtttaaa atgtttacaa
     3001 gataaatttt tacaatcaaa acaaaaaaat aaaactccac attttgctct gcaaattttt
     3061 acaaccctta aaaatcttca taaacttaac gataactata agcatacttt actaaatgct
     3121 gctaaattat gccatattgg agaatattta aatttctatt ttgctaatga acactctgct
     3181 cattttgtac taggtggatt aaattatgga ttttcacata aagaaaaagc tttaattgct
     3241 agcattatta agcttaatgg aaaaaaagtt aacccttata atcttgaacc ctataaacaa
     3301 cttttaccca atattcatac catttcatgg cttaatttta ttttgtgcct agctaaaact
     3361 ttaagcacaa atgaagataa gattgatttt gcttttgcaa acaatactct ttatatatat
     3421 caagaaaaca aaattcttaa tttacccaaa gatgagctca aaaaaattgc aaaaccagct
     3481 accatagcat tagcaatcaa tcaaaaaatt taagattttt tacctttttg acgctgctct
     3541 ataagatttt gaattctttt tttattctct tcaaaaaaag aatcaaaatt tttctctgtt
     3601 ttttctgtat gttttattat ttgttcctct ggaatttcaa cactttctaa aagcacattg
     3661 gaattaccta ttatcattgt ataacgttta ttagcgtgat caaaaacaac aagttgatta
     3721 tttttatcta aaaatctttg gaaaatcata gtaaaatctc tagaaacatt gttattttta
     3781 taaaccatag tctttttaaa ccaccaaagc actattaaca aaataactaa aatcagcatt
     3841 actaagatat aatttgtata atcataccct tctaaacttg tactttttgg tttaggcatt
     3901 aattcttgag aattattcgc agtagttgta ggtacagatt cgatatttgc ttttccttgc
     3961 tctatagctc gtatccttac tccaaattta tcattgatag agctaagttc taaattaata
     4021 ttttgtttgt tttgtagcat aatataggta ttattatttt tagaactaat actaatttta
     4081 tctacaagtt gagagttaag ttcttttaat tcatctttag aatacgttaa atcactaaaa
     4141 gttaaaagag ttaaattttt ttcttttttt tgagaaatct tgccattata ggcattatca
     4201 aaagaaagca ttaaatctac tcgatcattt ctatcgtaga tattaaaact aatcagctca
     4261 acactatata aaggtaaaat taaaaaaaat aatactagca atctcattta aatttctttt
     4321 ttaaagtatt gaagcacagt cttagaatcc aaaatttcat taattcttat agcgagattt
     4381 ttttcataaa ccataacctc gcctttgcca aaaattcttt tattgatata aagctcaacg
     4441 ctttctccag caggcttttc aagatcaata accgaaccta cttcaagttt taaaagctcc
     4501 gctacactca tatttgtagt tccaagctcg cttacaaaat ctactgtaat atctaagata
     4561 tcttcataag attgtaaaag cccatgatga atgttaaact ctatatcatc gctcattatt
     4621 tgcaatatcc tattctaaaa taacaatttt caaatttata agttaaagct tcatctagaa
     4681 ctatttcaga aaaatcaact tttcctaaat attccggaat tccgagttta tactcgtcat
     4741 cacccttggc atcatttaac aaatttttag cataacctat aatctgattg gcacattctt
     4801 tagttaaatc gcaccagtca tcttctttaa atttttcatc attaattaaa atttctgcaa
     4861 ttttttttaa aaattctttt ggaaaaaata aataaaaatt acattctcct tcgcttttgc
     4921 ccatgatagg aatactcgct ccataaagtt caccgcttat atcttgagct gcttcaatgc
     4981 gaagtcttaa gatatgctcg caaaaatgag tgatggaata ctcaagaatc tttaa
//
LOCUS       DAPWGO010000094         4968 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.096, whole genome shotgun sequence.
ACCESSION   DAPWGO010000094 DAPWGO010000000
VERSION     DAPWGO010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4968
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.096"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            61..441
                     /locus_tag="RJ336_001535"
     CDS             61..441
                     /locus_tag="RJ336_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213968.1"
                     /translation="MLIIGHKLLKNLDFSFIESVEEVKDNKVYCIVYDEKLISYLSQN
                     DFEFAILVQNKDEIFLANALGAKFLLCNDKKLAKFASKVAEFYVFDSRVLMIVDKLEN
                     FKKFYKLKIDGIILKDNIDNFPKN"
     gene            486..3999
                     /locus_tag="RJ336_001536"
                     /pseudo
     CDS             486..3999
                     /locus_tag="RJ336_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344336.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[ACP]--phospholipid O-acyltransferase"
     gene            complement(4007..4918)
                     /locus_tag="RJ336_001537"
     CDS             complement(4007..4918)
                     /locus_tag="RJ336_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDZ5213969.1"
                     /translation="MFVFIPLFTIFILLAGGYFAKRSGVLKQKQARTFLDFAIIFALP
                     CLIFDKAYHLNFDFSLIIFIFIGLFSCILAAFFAILIGKVFHFSKVTLVSMFLLSCFG
                     NTIFVGMPIVAGVFNDPQFSAEVIFYDALATTLPISLFGPFILSLGNGEKVSLLANVK
                     KILSFPPFLALLFGFLCKLITLPEFIFSPIRLFGASATPVALFAIGLGLGFMAIKTSY
                     KPTIVVIFAKMILAPLFFVFCLKIFNLELKDSTIVAIIESATPTMTLAGAMVMKAKLD
                     SNLAVSAVAFGVLFAFVSMPILIWALL"
BASE COUNT         1794 a          631 c          815 g         1728 t
ORIGIN      
        1 ttggtaacaa ttttataagt ataatttgca aaataataaa aaatagaact aaggaaaaaa
       61 atgcttatta ttggacataa attattaaaa aatttagatt tttcttttat tgaaagtgtt
      121 gaagaagtta aagataataa agtttattgt attgtttatg atgaaaaatt gatttcttat
      181 ttaagtcaaa atgattttga atttgctatt ttagttcaaa ataaagacga gatattttta
      241 gccaatgctt taggggctaa gtttttgctt tgtaatgata aaaaacttgc aaaatttgct
      301 agtaaggttg cagaatttta tgtttttgat agtagggttt taatgattgt tgataaatta
      361 gagaatttta aaaaatttta taaattaaaa atcgatggaa ttattttaaa agataatata
      421 gataattttc ctaaaaactg ataaattctt ttgcaaaata agtgctaatt gacgaggttt
      481 aaataatgca aaaaaaatct tttttgaaaa tttacggatt aattcctttt ttacttatag
      541 cattcatcaa tgcttttgtg gatttgggac ataaaattat tattcaaaat actatttata
      601 aggcctatga aggaagtgag cagttatttt taaatgctat agttaatgct ttgattttac
      661 ttccttttat tcttatgctt tctccttcgg gttttttagc ggataaatat ccaaaaaata
      721 ttgtaatgaa aatttcagca attttcaatg ttatactcac tttaataatt tgcatttgtt
      781 actatagcgg tgctttttgg atggctttta tttttacttt tataatggga gcacaagcag
      841 cgatttattc accaagcaaa tacggtttta ttaaagaact cgtaggaaaa gactttcttg
      901 ctatgggtaa tggtgtaatt aatgcagtaa gcattatggc aatcttagca ggaatggctt
      961 tgttttcttt aagttttgaa agtctttata gttctgcata taatcaaaca gatgaaattt
     1021 taaaagaagt agcgccttta ggaattgtgc taattttatt ttcttgtatc gaagtatttt
     1081 ttgcgtggcg tttacctaag ctcaaacaaa caaataaaga tttagttttt aacaaaaaag
     1141 actatattcg tggaaaactt ctaataaata atcttaagct tgtttttaaa aataaaacta
     1201 tttggctttg cataattgga atttcatttt tttgggctat atctcaactt tatcttgtca
     1261 gctttcctgt ctttgccaaa aatgaacttt tcatagaaaa tactttttat gtgcaatttt
     1321 cactcgcttt ttctggtatg ggagtgattt taggctcttt agtagctggt aaattttcaa
     1381 aaaattatat agaacttgga cttattccac ttggtgcatt gggtatgttt ttaatggctt
     1441 ttttaatgcc ttattttata agtttattaa attatagttt tttatttttc ttttttggat
     1501 tttgcggagc tctttttatc attcctttaa atactttaat ccaatttcat gccaaagaaa
     1561 atgaattagg acaaattctt gcaggaaata atttttttca aaatattgct atgttgggat
     1621 ttttgctctt ggcaacttta tttgcaaaat ttgaaatcaa tgtgatttat ttgttttatt
     1681 ttattgcttt ggtaactttt ataggaagtt tttacatact tttaaaactt cccttttctt
     1741 tagtacgcat acttttaagc atagcttttt tgcaacgata ccgtttgctt gtggaaggtt
     1801 ttgaaaatat accagaaaaa ggcggagctt tgcttttggg taatcatatt tcttttattg
     1861 attgggctgt tgtacaaatg gcaattccaa gaaaaattta ttttgttatg gaaagaagca
     1921 tttattctaa atggtatatt aaaatttttc ttgataaatt tggtattatt cctgtatcaa
     1981 gtacagggag taagacgagt ttagaactga tagcaaagca tattaaagaa ggtgatttag
     2041 tttgcttatt tcctgaaggt acactttcgc gacatggaca attaaatgaa tttaaagcag
     2101 gatttgaatt agcttgtgaa tgtttaagtg aagatgatgg aaaaattatt cctttttata
     2161 taagagggct ttggggtagc gctttttcaa ggagtgatga agaattttcg gcaagaaacc
     2221 gcactttaaa taaaagaaaa attgctatag cttttggtaa agctatgcct ttgcattcta
     2281 aaaaagatga agttaaagct aaagtttttg aactttcttt tatggcttgg aaatcacaat
     2341 gcgaagctat gcataccata gcaagagctt ggatagatac agctaaaaaa aatctaaatc
     2401 aaatagctat tatcgataca ttagctggag atatttctta tagaaaaatg ttgactctta
     2461 gcttatttct tagttttttt attaaaagaa aatccaaaga attaaacatt aaccctcagc
     2521 gtggaagtta cgcccctaaa gaggaagcta taggaatttt actacctgct tcttttgcaa
     2581 gttctttaac caatctatct gttttaatcg cagaaaaaat tgcagtaaat cttaatttta
     2641 ctgctggaga aaaagcttta aaagcagcta taaaaaatgc gcaaatttca caaatttata
     2701 cttctaaaac ttttttagaa aaattatcaa ataaaggtat aaacctaaat ttcgatacaa
     2761 atatacattt aatttatttt gaagatattg tagaagattt taaaatgcaa aaaactaaaa
     2821 tttttagcat gatgttagca gttagtatta tgcctagttt tatacttaaa agtatcttta
     2881 ccccttcaaa aaacaatctt gccatcgcag ctattttatt tagcagtgga agcgaaggtt
     2941 ctccaaaagg tgttatgcta aataaccgta atattttaag caatatagca caaatttctg
     3001 atgtgctttg tacaagaaat aatgatgtca ttctctcatc tttgccacct tttcatgctt
     3061 ttggacttac agtaactacg tttttgcctt tgcttgaagg tattaaaagt atcacttttg
     3121 cagatccaac tgatgcctta gggattgcca aagctgttgc taaaaataat gtcactatta
     3181 tgtgtggaac ttcaaccttt ttaggaattt atgcaagaaa taaaaagctt gatgctttaa
     3241 tgtttgaaag tttaagaata gttgtatcag gtgctgaaaa actaaaaaat gaagtaagaa
     3301 ttgcttttga aatgaagttt aaaaaaagca tttttgaagg ttatggggct acggaaacca
     3361 cacctgtagc gagtgtaaat ttaccgaatc gttttgatgc agattattgg cttatacatc
     3421 gtgctaataa agaaggaagc gtaggaatgc ctctacctgg aactgcagtg cgtattgttg
     3481 atccaaataa ttatgaaaat ttaaaaacaa atgaagatgg actcatactt ataggcggtc
     3541 atcaagttat ggtaggttat cttaatgaca aagaaaaaac cgatgaagtt attaaagaaa
     3601 ttgatggtat aagatggtat aacacgggag ataagggaca tttggatgaa gatggttttt
     3661 tatatattgt cgatcgttat tctcgctttg caaaaattgg cggagagatg atttctttgg
     3721 gtgcaataga agaagaaatt gccaaatttt atagacactg aagtggttaa attttgtgcc
     3781 acatctttag aagatgagaa aaaaggggaa caaattgttt tactcataga atgtaataat
     3841 gaaatttttg aaggagtatg tgaggctata aaaaattcta atatacctac actttttaaa
     3901 cctagatatt attttcaaat agaaaaaatt cccctcctag gttcaggaaa agttgatctt
     3961 aaaaaagtta aagaattagc taaaaattta gccctataat ttgagcttat agtaaagccc
     4021 aaatcaaaat tggcatagaa acaaaagcaa aaagaactcc aaaggctaca gcactcacgg
     4081 ctaaattgct atctagttta gctttcatta ccatagctcc tgctaaggtc atagtaggag
     4141 ttgcgctttc tataatagca acgatggtag aatcttttaa ttctaaatta aatattttta
     4201 aacaaaatac aaaaaataaa ggagctaaaa tcattttagc aaagatgaca actattgtag
     4261 gtttgtaaga ggttttaatt gccataaaac caagtcctaa acctatggca aaaagtgcaa
     4321 caggggttgc agaagcacca aataaacgaa taggagagaa aataaattca ggtaaagtaa
     4381 tcaatttaca caaaaaacca aaaagcaaag ctaaaaaagg tggaaagcta agaatttttt
     4441 taacattagc aagcaaactg actttttctc catttcccaa agaaagtata aaaggtccaa
     4501 aaagtgatat aggtaaagtt gtggctaaag catcgtaaaa tataacttca gcgctaaatt
     4561 gtgggtcatt aaatacacca gcaacaatag gcatacccac aaatatagta tttccaaaac
     4621 aagaaagcaa aaacatactg actaaagtta ctttagaaaa gtgaaaaact tttccaataa
     4681 gaatagcaaa aaaagctgcc aatatacaac taaataatcc aataaaaata aaaataatca
     4741 atgaaaaatc aaaatttaaa tgatatgctt tatcgaaaat caaacaaggt aaagcaaaaa
     4801 taatagcaaa atctaaaaaa gtcctagctt gtttttgctt taaaacgcca cttcttttgg
     4861 caaaatatcc gcctgcaagt aaaatgaaaa ttgtaaataa tggtataaaa acaaacattg
     4921 aataatcctt tttaagggat ggtttttgaa aacggataga attatatt
//
LOCUS       DAPWGO010000095         4960 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.097, whole genome shotgun sequence.
ACCESSION   DAPWGO010000095 DAPWGO010000000
VERSION     DAPWGO010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4960
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.097"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(252..2123)
                     /gene="dnaK"
                     /locus_tag="RJ336_001538"
     CDS             complement(252..2123)
                     /gene="dnaK"
                     /locus_tag="RJ336_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDZ5213970.1"
                     /translation="MSKVIGIDLGTTNSCVAVYERGESKVIPNKEGKNTTPSVVAFTD
                     KGEVLVGDSAKRQAVTNPEKTIYSIKRIMGLMINEDAAKEAKNRLPYHITERNGACAI
                     EIAGKIYTPQEISAKVLMKLKEDAEAFLGESVVDAVITVPAYFNDAQRKATKEAGTIA
                     GLNVLRIINEPTSAALAYGLDKKDSEKIVVYDLGGGTFDVTVLETGDNVVEVLATGGN
                     AFLGGDDFDNKLIDFLANEFKDETGIDLKNDVMALQRLKEAAENAKKELSSANETEIN
                     LPFITADASGPKHLVKKLTRAKFEGMIDSLVAETITKINEVVSDAGLKKDEIKEIVMV
                     GGSTRVPLVQEEVKKAFNKDLNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLS
                     LGIETLGGVMTKIIEKGTTIPTKKEQVFSTAEDNQSAVTINVLQGEREFSRDNKSLGN
                     FNLEGIPPAPRGMPQIEVTFDIDANGILTVSAKDKATGKAQEIKITGSSGLSEEEINN
                     MVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSELGEKVAAADKENIQKALDDL
                     RETLKNQNASKEEIESKMKALSEVSHKLAENMYKKDEPNTANDKKKKDDDVIDAEVE"
     gene            complement(2146..2676)
                     /gene="grpE"
                     /locus_tag="RJ336_001539"
     CDS             complement(2146..2676)
                     /gene="grpE"
                     /locus_tag="RJ336_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDZ5213971.1"
                     /translation="MSEQKQEFENENAENSEHLQDENLQNIEDVEQNRLQKDYDELKD
                     KYMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAINVECHDEISLKI
                     KEGVQNTLDLFLKKLEKHGVALIKEEKEFDPNLHEAMFHVDSQNHQSGEVVTVLQKGY
                     KIADRVIRPTKVSVAK"
     gene            complement(2673..3464)
                     /locus_tag="RJ336_001540"
     CDS             complement(2673..3464)
                     /locus_tag="RJ336_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HDZ5213972.1"
                     /translation="MKSRDKKDLILDSIIQTYLLDNVPIGSNELNLNLCIPASTIRVY
                     LKRLSDEGLITQLHISSGRIPTILTMQNYWQSFWKKEQDQDINIKSENFLKELSKEFE
                     IYCLVYGGRSLVLKEVLDLNAKFIVLDFKEEELVLKYEKEAWNFLQSLIGLDLFSIEK
                     IALRVHFMDLVEKIASLRQNLICYRSNEERAYQIYQNDEFVKLLDCGVHRYFKESLEF
                     EPLFKEGFMGLKVDAQFLGEDVNIILAGSVYTDYKKILQYIKEAA"
     gene            complement(3681..4862)
                     /locus_tag="RJ336_001541"
     CDS             complement(3681..4862)
                     /locus_tag="RJ336_001541"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5213973.1"
                     /translation="MDFIKFLNHFQPISKSSQQASVYKSFKLNLKPKILNEKDENSSS
                     FQDQKTDVAQTMLQRLEDEKVFNQKVSDKVKKAERGMTTIYFRDPITNNLVRSALSST
                     AINKMGIEFDKEDMTKRLDGSYILNGKAENFVAGWYADIAYTRAYVASDRNNDGYLED
                     YELEDTKSGFVAQETNLGLFVQSYTQLNGSVDTLFGFEKDFREMRPDDTKDTDYAGRT
                     IGLELDKMIRKDGDFDGELSFSETGMQAVKTKAPNSGWTESVGILTLTKFDQTNTMEI
                     KDILDKLGKGVKYDDLSEDEKSLLKMQLSDKIFDEVEDKETGNKKLVFNLDKFKIFYE
                     GFVDLFKQRSVKMLGLKPEDATKLNYDNLGEIVNEMKQTYFDTNSTSYGKIADLIKIW
                     A"
BASE COUNT         1510 a          952 c          590 g         1908 t
ORIGIN      
        1 tgaagttaaa ttttctttag aagattttac aaaaatttta cctacattat tcaaaccatt
       61 ttagtaaaag aaatacaaga aaatgaatta tctgatttta aactggaact tcaaaaagaa
      121 ttggttaaaa aatcaatgaa aaattaggta gcaagctaat aaaagaatta tattttacag
      181 attttgtcat ttctttaaaa ttttaaaaaa ttttcaagcc ttttaaaaag gcttgaatag
      241 agattttagg attactcaac ttcagcgtcg attacatcgt catctttttt ctttttatca
      301 ttagctgtat ttggctcatc ttttttatac atattttcag ctaacttatg agaaacttca
      361 cttaaagctt tcattttact ttcaatctct tctttgcttg cattttgatt tttcaaagtc
      421 tcgcgcaaat catcaagagc tttttggata ttttctttat cagcagcagc aactttttca
      481 cccagctcgc ttaaagattt ttctacttga tgcgccaagc tatcagctgc atttctagca
      541 tctacagctt ctttgcgttt tttatcttct tctttgtgaa gttcagcatc ttttaccatg
      601 ttattaattt cttcttcgct aagtccgctt gaacctgtga ttttgatctc ttgagcctta
      661 cctgttgctt tatcttttgc actaacggtt aaaataccat ttgcatcgat atcaaaagta
      721 acttcgattt gtggcatacc gcgtggtgct ggtggaattc cttcaagatt gaaatttcct
      781 aaagatttat tatcacgact aaattctctt tccccttgta aaacattgat agttacagca
      841 ctttgattat cctcagcggt tgagaaaact tgctcttttt tagttggaat agttgtacct
      901 ttttcgataa tcttagtcat taccccacct agagtttcta tacccaaaga gagcggagta
      961 acatcaagta aaagcacatc tttaacatcg ccttttataa ccgcaccttg aatcgccgca
     1021 ccaatagcca caacttcatc tggatttaca gacttgttaa gatctttatt aaaggctttt
     1081 ttcacttctt cttgcactaa aggaacacga gtagagcctc ctaccataac aatttcttta
     1141 atctcatctt ttttaagacc tgcgtcgctt actacttcat tgattttagt gatggtttca
     1201 gccactaaag aatcaatcat accttcaaat ttagctctag taagtttttt aaccaaatgt
     1261 tttggcccac ttgcatctgc tgtgataaat ggtaaattaa tttcagtttc attagctgag
     1321 cttaattctt ttttagcatt ttctgctgct tctttcaagc gttgtagagc cataacatca
     1381 tttttaagat ctatgcctgt ttcatcttta aattcattag ctagaaaatc aataagttta
     1441 ttatcaaaat catcgccacc taagaaagca ttaccacctg ttgctaaaac ttctactaca
     1501 ttatcaccgg tttcaagcac agtaacgtca aaagttcccc cacctagatc ataaaccacg
     1561 attttttcac tatctttttt atcaagtcca taagctagag ctgctgaagt aggctcattg
     1621 ataattctta atacattaag ccctgctatc gttcctgctt cttttgtcgc ttttctttgt
     1681 gcatcgttaa aatatgcagg cacagtaata actgcatcta caacactctc gcccaagaaa
     1741 gcttcagcat cttcttttag tttcattaaa acttttgctg aaatttcttg cggagtataa
     1801 attttccctg cgatctcaat agcacaagca ccatttcttt cagtgatatg ataaggaagt
     1861 ctgtttttag cttctttagc cgcgtcttca ttgatcatca aacccataat tcttttaata
     1921 gaataaatag ttttttcagg gttagttacc gcttggcgtt ttgcactatc tcctactaaa
     1981 acctcgcctt tatctgtaaa agctaccaca gaaggagttg tatttttacc ttctttattt
     2041 ggaattactt tactctcacc gcgttcatac acagcaacac aagaattggt tgttcctaaa
     2101 tctataccta taactttact cattttttat cctttttatt aaaatttatt ttgctacact
     2161 aactttggtt gggcggatta cgcgatcggc tattttatag cctttttgaa gcacggtaac
     2221 cacttcacca ctttgatgat tttggctatc tacatgaaac attgcctcat gtaaatttgg
     2281 atcgaactct ttttcttctt taataagagc cactccatgc ttttcaagtt ttttaagaaa
     2341 caaatctaaa gtgttttgca ctccttcttt gatttttaag ctaatttcat catgacattc
     2401 gacattaata gctgcttcta aagcatccaa aacatcaagc aaatcctttg caaagctttc
     2461 atttgcataa gccatagcac ttagcttttc tttttccatt ctttttttaa tattttcaaa
     2521 ttcagcgttt gcacgcatat atttgtcttt taattcatca tagtcttttt gcaatctgtt
     2581 ttgctcaaca tcttcgatat tttgcaaatt ctcatcttgc aaatgttcag aattttctgc
     2641 gttttcattt tcaaattctt gcttttgctc gctcacgccg cctcctttat gtattgtaat
     2701 atttttttat aatccgtata aacactacct gctaagataa tatttacatc ttcgcccaaa
     2761 aactgcgcat ccaccttaag ccccataaaa ccttctttaa ataaaggttc aaattcaaga
     2821 ctttctttaa aataacgatg aactccgcaa tctaagagct taacaaattc atcattttga
     2881 taaatttgat aagctctttc ttcattgctt ctatagcaaa tcaaattttg ccttaagcta
     2941 gctatttttt ctacaagatc cataaaatga accctcaaag ctattttttc tatactaaaa
     3001 agatccaatc ctataagact ttgtaaaaaa ttccatgctt ctttttcata ttttaaaacg
     3061 agctcttctt ctttaaaatc aagcactata aacttagcat ttagatcaag cacttcttta
     3121 agcactaagc ttctaccacc ataaacaaga cagtaaattt caaattcttt actcaactct
     3181 tttaaaaaat tctcactttt gatattgata tcttgatctt gttctttttt ccaaaaactt
     3241 tgccagtaat tttgcattgt caaaatagta ggaattctac cactacttat atgaagctga
     3301 gtgatcaaac cctcgtcgct aagcctttta agatagacgc gtatagttga agcagggatg
     3361 caaagattta aattcaattc atttgaacca ataggaacat tatctaaaag ataagtttgg
     3421 atgatagaat ctaaaatcaa atccttttta tctcggcttt tcatagctct ttccttaaat
     3481 ttttagcact ctattttttg attgctagaa gtattataca acattgagtg ttattttgtc
     3541 aagtataaat ataaaaaaat atacttaatt ttatttagtc tatatgacta aacttttatt
     3601 agttgctttt ttataagaat acaatatatc aatatatcaa aataaaaata acaatacact
     3661 ttacaagata attataaaaa ctaagcccaa attttaatta aatcagctat ttttccataa
     3721 cttgtagaat ttgtatcaaa ataagtttgc ttcatttcgt tgacaatttc accaagattg
     3781 tcataattaa gtttagttgc atcttcaggt tttaaaccta gcatttttac acttctttgt
     3841 ttgaataaat ccacaaaacc ttcatagaaa attttaaatt tatccagatt aaaaacaagt
     3901 tttttattac cagtttcttt atcttcaact tcatcaaaaa ttttatcaga taattgcatt
     3961 ttaagtagag atttttcatc ttcacttaaa tcatcatatt ttacaccttt acctaattta
     4021 tccaagatat ctttaatttc cattgtatta gtttgatcaa atttagttaa agttaatata
     4081 cctacacttt cagtccatcc agaatttgga gctttggttt ttactgcttg catgccagtt
     4141 tcgctaaaac taagctctcc atcaaaatct ccatcttttc ttatcatttt atcaagctct
     4201 aagcctatag ttctaccagc ataatctgta tctttggtat catctggacg catttctcta
     4261 aaatcttttt caaaaccaaa tagagtatct acactaccat ttaattgtgt ataagattgc
     4321 acaaaaagtc ctaaatttgt ttcctgtgct acaaaaccac ttttcgtatc ttcaagctca
     4381 taatcttcta aatatccatc attatttcta tcgctagcca cataagctct agtatatgct
     4441 atatcagcat accatccagc cacaaaattt tcagcttttc catttaatat atatgatcca
     4501 tcaagtcttt tagtcatatc ttctttatca aattcaattc ccattttatt gatagctgtt
     4561 gaacttaaag cactacgaac aaggttattt gtaataggat ctctaaaata tatagtagtc
     4621 atacctcttt cagctttttt cactttatca cttacctttt gattgaaaac tttttcatct
     4681 tctaatcttt gaagcatagt ttgagctaca tctgtttttt gatcttgaaa tgaagaggaa
     4741 ttttcgtctt tttcattaag aatctttggt tttaaattta acttaaaaga tttatataca
     4801 ctagcttgct gagaagattt agatatgggt tgaaaatgat taagaaattt tataaaatcc
     4861 attttgatgc cttcaaattt tcgacatctt ttcaaaaata ttgctaatat attttacgta
     4921 attttaactt agaaaatttt aaatttttat cctctattac
//
LOCUS       DAPWGO010000096         4869 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.098, whole genome shotgun sequence.
ACCESSION   DAPWGO010000096 DAPWGO010000000
VERSION     DAPWGO010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4869)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4869)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4869
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.098"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..573
                     /locus_tag="RJ336_001542"
     CDS             <1..573
                     /locus_tag="RJ336_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HDZ5213974.1"
                     /translation="EIKNNKIYAKPKEKLIIFASTHKDEEELLLDHFKLEENEKLIIA
                     PRHPERFKEVENLLLNKGLEFEKFSSLKDENKKFAKKILLLDALGELVNFYAISDVVV
                     LGGSFIEGIGGHNPIEVAYFDNVLISGKFIHNQKALFEEVENVYFCENLKDLNDKIHY
                     LNLKVKISKKENLDLIIQTIQKGIDARKSL"
     gene            554..1306
                     /locus_tag="RJ336_001543"
     CDS             554..1306
                     /locus_tag="RJ336_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDZ5213975.1"
                     /translation="MQEKAYKLLALQEKISNREAKDLIDKGCVFSHGKKVVVARALMS
                     DKARFNVIKTKNPQIIFEDDKIIAINKPYAYVSEDLEKKFNAKLLNRLDKETSGVILL
                     CKDEDFRKLCIEEFKKHRVYKSYIAVLDGVLAEEVEVNEPIFTIKAKGGALSKVSKDG
                     LSALSIITPIMMQSKKTLAKIVIQTGRTHQIRVHAKFIKHGVVGDEKYAKISSDRMYL
                     HSYEIKIFDYYFKAELDNSFAKVGFEIKNLDF"
     gene            1374..2711
                     /gene="ffh"
                     /locus_tag="RJ336_001544"
     CDS             1374..2711
                     /gene="ffh"
                     /locus_tag="RJ336_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDZ5213976.1"
                     /translation="MFELVSESFKSAINKLRFVDDEKALKNALETLKKALLKADVHHK
                     VTKELLTLIEEDVKQNGIGQKQFLNAIKVNLENILSVNGKNQGFVFASKPPTVVLMAG
                     LQGGGKTTSTIKLANYLKLRNKKVLVAACDLQRLAAVEQLRQLCEANEIELFFIENEK
                     DPIRVAKEALKKAESSMVDVLLVDTAGRLAIDEALMNELKAVKDVLNPDEIFYVADAM
                     SGQDGVKTAASFNEALDISGVILSKFDADTKGGVALGIAKQIGIPLRFIGVGEKVADL
                     EVFIPDRIVSRIMGEGDLATLAEKTAAIIDEKEAKKLNQKIKKGEFNFNDFLNQMESI
                     KKLGSMKSLIGMIPGLGGMANAVKDIDLDNSKEIIRIKAMISSMTPKERENPDLLNNA
                     RKRRIAEGAGLSQVEVNRFLKQFSNAAKLAKRFSGKKGMESLTQMMSQARRQF"
     gene            2776..3003
                     /gene="rpsP"
                     /locus_tag="RJ336_001545"
     CDS             2776..3003
                     /gene="rpsP"
                     /locus_tag="RJ336_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDZ5213977.1"
                     /translation="MTVIRLTRMGRTKRPFYRIVVTDSRKRRDGGWIESIGYYNPMVE
                     PEVIKVDAERLAYWKSVGAKLSDKVASITSK"
     gene            3006..3248
                     /locus_tag="RJ336_001546"
     CDS             3006..3248
                     /locus_tag="RJ336_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HDZ5213978.1"
                     /translation="MVENFLREYAKLIADYPEQIDTQKIELSENFFEIVLFAHKVDTG
                     KLIGKNGKMINAIKTVISAYKSKDASSYRVTVKALE"
     gene            3241..3780
                     /gene="rimM"
                     /locus_tag="RJ336_001547"
     CDS             3241..3780
                     /gene="rimM"
                     /locus_tag="RJ336_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA processing protein RimM"
                     /protein_id="HDZ5213979.1"
                     /translation="MSEKDFVQVAKLGKTVGLKGYVKLHNLSDFSSQFKKDATFFIKN
                     TKEMLKIKHYNASNSTVLFENYEDIEKAKELINLILFQSIEKSRQTCKLKKDEFFYFD
                     ILECEVFEEDKRLGKVIDILETGASYLFEIQSDEKWVEKKYPKIFFIPYLDKFVKNID
                     IEKRQIFCTQDAFLILENS"
     gene            3777..4481
                     /gene="trmD"
                     /locus_tag="RJ336_001548"
     CDS             3777..4481
                     /gene="trmD"
                     /locus_tag="RJ336_001548"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDZ5213980.1"
                     /translation="MKFSFVSLFPNLMEFYFQDSILARAKEKKLFKLNFYNPRDFSKN
                     SYHKVDDYKIGGGAGLLMQAEPMYEVLRSIQEKKENPYFIFLNPSGKTFNQKDAKRLS
                     KKEHIVFVCGRYEGIDERVLEIFANEVFSIGDFILTGGELPALVMCDAILRNVNGVLG
                     NMESLEEESFENNLLEAPAFSKPFIFEKKNKKFYTPSEFLKGNHARIASLKTTLASCK
                     TKFFRPDLFLEHERKK"
     gene            4492..4848
                     /gene="rplS"
                     /locus_tag="RJ336_001549"
     CDS             4492..4848
                     /gene="rplS"
                     /locus_tag="RJ336_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDZ5213981.1"
                     /translation="MKNKYIEQFEAKQIEGKNVPDFRAGDTLKLAIRIKEGDKTRIQN
                     FEGICIARRGNGVSETFIVRKMGANNVGVERIFPIYSESLESITVLRRGRVRRARLFY
                     LRDRRGKAARIKELKK"
BASE COUNT         1824 a          535 c          935 g         1575 t
ORIGIN      
        1 gaaattaaaa ataataaaat ttatgccaaa cctaaggaaa agcttatcat ttttgctagt
       61 acgcataaag atgaagaaga gcttttgctt gatcatttta aactagaaga aaatgaaaaa
      121 ctcattatcg ccccacgaca ccctgagcgt tttaaagaag ttgaaaattt gcttttaaac
      181 aaaggtttgg aatttgaaaa atttagttct ttaaaagatg aaaataagaa atttgctaaa
      241 aaaattttgc ttttagatgc tttaggagag cttgtaaatt tttatgcaat ttctgatgtt
      301 gttgtgcttg gaggttcttt catagaaggc ataggaggac acaatcctat agaagtggca
      361 tattttgaca atgtattaat cagtgggaaa tttattcata atcaaaaggc tttatttgaa
      421 gaagtagaaa atgtatattt ttgcgaaaat ttaaaagatt taaatgataa aattcattat
      481 ttaaatttaa aagttaaaat ttccaaaaaa gaaaatttag atcttattat acagaccata
      541 caaaagggaa ttgatgcaag aaaaagctta taaactctta gctttgcaag aaaaaatttc
      601 aaatcgtgaa gctaaagatt tgattgataa gggttgtgtt ttttcgcatg gaaaaaaagt
      661 tgtggttgct agagctttga tgagcgataa ggcaagattt aatgtgataa aaaccaaaaa
      721 tcctcaaatt atttttgaag atgataagat tattgctatt aataaacctt atgcttatgt
      781 gagtgaagac ttggagaaaa aatttaatgc caagctttta aatcgtttag acaaagaaac
      841 aagcggtgtg attttgcttt gcaaagatga agattttaga aagctttgta tagaagaatt
      901 taaaaaacat agagtttata aaagttatat tgcggtttta gatggggttt tggctgaaga
      961 ggttgaagtg aatgagccta tttttaccat aaaagcaaaa ggcggggcgt taagtaaagt
     1021 ttcaaaagat ggtttaagtg ccttaagcat cattactcct attatgatgc agtcaaaaaa
     1081 aaccttagca aaaatagtca ttcaaacagg tagaactcat caaatcagag tgcatgctaa
     1141 atttataaaa catggcgttg taggtgatga aaaatatgct aaaatttcaa gcgatagaat
     1201 gtatttacat agttatgaaa ttaaaatttt tgattattat tttaaggctg agctagataa
     1261 tagctttgca aaagttggct ttgagataaa aaatttagat ttttaaagcc atttaagaaa
     1321 aaattttgta taatgcaagg tttaatttaa aaattttata gaaaggtgat aaagtgtttg
     1381 agttagttag cgaatctttt aaatcagcga ttaataaatt acgttttgtt gatgatgaaa
     1441 aagcacttaa gaacgcttta gaaaccttaa aaaaagctct tttaaaagca gatgttcacc
     1501 ataaggtaac taaagagctt ttgactttga tagaagaaga tgtaaagcaa aacggaatag
     1561 gtcaaaaaca atttttaaat gccattaaag taaatttaga aaatatttta agtgtcaatg
     1621 gcaaaaatca aggttttgtt tttgcttcta aacccccaac agtagttcta atggcaggtt
     1681 tacaaggggg cggtaagact acaagcacta ttaaacttgc aaattattta aaattacgca
     1741 ataaaaaagt tttagttgca gcttgtgatt tacagcgttt agcagcagtg gagcagctaa
     1801 gacaactttg tgaagctaat gaaattgaac ttttcttcat agaaaatgaa aaagatccta
     1861 ttagagttgc taaagaggct ttaaaaaagg ctgaaagttc tatggtggat gttttgcttg
     1921 tggatactgc tggacgtttg gctatagatg aagctttgat gaatgaatta aaagcagtta
     1981 aggatgtttt aaatcctgat gagattttct atgttgctga tgcaatgagt ggtcaagatg
     2041 gggtcaagac tgcggctagt tttaatgaag ctttggatat cagcggggta attttatcaa
     2101 aatttgatgc agatactaaa ggtggagtag ccttaggtat agcaaaacaa atcggtattc
     2161 ctttaagatt tattggtgtg ggtgaaaaag tagcagattt agaagttttt ataccagatc
     2221 gtatagtaag tcgtattatg ggtgagggtg atttggcaac tttagctgaa aaaactgctg
     2281 cgattattga tgaaaaagag gctaaaaaac tcaatcaaaa aattaaaaaa ggtgaattta
     2341 attttaatga ttttcttaat caaatggaaa gtattaaaaa attaggaagc atgaagtctt
     2401 taatcggcat gataccagga cttggcggaa tggcaaatgc ggtaaaagat atagatttgg
     2461 ataattctaa agaaatcata cgcattaaag caatgatttc ttcaatgact ccaaaagaaa
     2521 gagaaaatcc tgatttatta aataatgcta gaaagcgtcg tatagcagag ggagcaggtc
     2581 tttctcaggt agaagtcaat cgttttttaa aacaatttag caatgcagca aagcttgcaa
     2641 aaagattttc aggtaaaaaa ggaatggaaa gtttaacaca gatgatgagt caagctagaa
     2701 ggcaatttta aattttattt ataaatactt tttatagtat ctataaataa aatttttaat
     2761 ttttaaggag tataaatgac agttattaga cttacaagaa tgggtagaac taaaagacca
     2821 ttttatcgta ttgtagttac agacagtaga aaacgtcgtg atggtggttg gatagaaagt
     2881 attgggtatt ataatcctat ggtagaacct gaggtaatta aagttgatgc agagcgttta
     2941 gcttattgga aaagtgttgg tgcaaaactt agcgataaag ttgcttctat cactagcaaa
     3001 taatcatggt agagaatttt cttagagaat acgcaaaatt aattgcagat tatcctgaac
     3061 agattgatac tcaaaaaatt gaattaagtg aaaatttttt tgagattgtt ctttttgcac
     3121 ataaggttga tacaggtaag cttataggta aaaatggaaa aatgatcaat gctataaaaa
     3181 ccgtaatctc tgcttataag agcaaggatg caagttctta tagagtaacg gtaaaagcac
     3241 ttgagtgaaa aagattttgt tcaagttgca aaacttggta aaactgtggg tcttaagggt
     3301 tatgtaaaat tgcataacct gagcgacttt tcttctcaat ttaaaaaaga tgctactttt
     3361 tttataaaaa acaccaaaga aatgttaaag attaagcatt ataatgcaag caattctact
     3421 gttttatttg aaaattatga agatatagaa aaggccaaag aattaattaa tcttattctt
     3481 tttcagagta tcgagaaaag cagacaaact tgtaaattaa aaaaagatga gtttttttat
     3541 tttgatattt tagagtgtga agtttttgaa gaagataaaa gattaggtaa agtgattgat
     3601 atcttggaaa ctggagcttc ttatttattt gaaattcaaa gtgatgaaaa atgggttgaa
     3661 aaaaaatatc ctaaaatatt ttttattcca tatttagata aatttgttaa aaatatagat
     3721 atagaaaaac gacagatttt ttgcacgcaa gatgcttttt taattttaga aaattcatga
     3781 aatttagctt cgtttctttg ttccctaatc ttatggaatt ttactttcaa gattctatac
     3841 ttgcaagagc aaaagaaaaa aaacttttca aacttaattt ttataatcca agagattttt
     3901 ctaaaaattc ctatcataaa gtcgatgatt ataaaatagg tggcggagct ggacttttga
     3961 tgcaagctga acctatgtat gaggtgctaa gaagtattca agaaaaaaaa gaaaatccct
     4021 attttatttt tttaaatcca agtggtaaaa cctttaatca aaaagacgcc aaacgcttaa
     4081 gtaaaaaaga acatatagtt tttgtatgcg ggcgctatga aggtatagat gaaagagtgc
     4141 ttgaaatttt tgcgaatgaa gtttttagca taggggattt tattttaaca ggaggagaat
     4201 tacctgcgct tgtaatgtgt gatgcgattt taagaaatgt taacggggtt ttaggaaata
     4261 tggaaagttt ggaagaagaa agctttgaaa ataatttact cgaagcgcct gctttttcaa
     4321 aaccttttat ttttgagaaa aaaaataaaa aattttatac tccttcagag tttttaaagg
     4381 gtaatcacgc tagaattgca agtttaaaaa ctactttggc gtcttgcaaa acgaaatttt
     4441 ttcgtccaga tttattttta gagcatgaac gcaaaaaata agggattttt tatgaaaaat
     4501 aaatatatag aacaatttga agcaaaacaa attgaaggta aaaatgttcc agattttcgt
     4561 gctggtgata ctttaaagct tgcaattcgc atcaaagaag gggataaaac aagaatccaa
     4621 aattttgagg gtatttgtat tgctagaaga ggtaatggcg taagtgaaac ttttatcgtg
     4681 cgtaaaatgg gcgctaataa tgttggcgtt gagagaattt tccctattta tagtgaaagt
     4741 ttagaaagta ttactgtttt gcgtcgtggt cgtgtgcgcc gtgcaagatt attctactta
     4801 agagatagac gcggtaaagc agcgcgtatt aaagagctta aaaaataatt tataattatt
     4861 ttttattat
//
LOCUS       DAPWGO010000097         4802 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.099, whole genome shotgun sequence.
ACCESSION   DAPWGO010000097 DAPWGO010000000
VERSION     DAPWGO010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4802
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.099"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..755)
                     /gene="map"
                     /locus_tag="RJ336_001550"
     CDS             complement(<1..755)
                     /gene="map"
                     /locus_tag="RJ336_001550"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDZ5213982.1"
                     /translation="MIELKKPDEIEKLRIANQIVAKTLNFLENEIKIGMSLKQIDKMA
                     EDYILSLGAKPSFKGLYGFPGAICTSLNQVCIHGIPDDKIIKEGDILGLDVGSLIDGY
                     YGDAARTIAIGEVSPTDKALISCAKDALYHAIDIIHDGMRFKELSAALGEFIHTRGFV
                     PLRGYCGHGIGRKPHGEPEILNYLEKGASAKSGPKIKNGMVFCIEPMICQKDGTPKHY
                     NGKWDAGSIDGLNAAHYEHCVAVINGRAEILSM"
     gene            complement(765..1508)
                     /locus_tag="RJ336_001551"
     CDS             complement(765..1508)
                     /locus_tag="RJ336_001551"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDZ5213983.1"
                     /translation="MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDK
                     DTIIKFCLEALEFFEQFQIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIK
                     ALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQ
                     SAMEYYFKNITTPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENID
                     LKNHKAKLHFYASSDVESLKNTAKIWLNL"
     gene            complement(1510..1971)
                     /locus_tag="RJ336_001552"
     CDS             complement(1510..1971)
                     /locus_tag="RJ336_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDZ5213984.1"
                     /translation="MRHIFFIITIIFFISGCSFYQNLNYTRPIYNTNKETKLKTIAHE
                     WKKTPYVLGGTSKKGADCSGFTQSALAQLNIRIPRTTKTQLGSGRKVSKSKLQTGDLV
                     FFKTGRGPNGMHVGIYMSKGKFIHLSTKGGVKEVELNNSYWKARYIGARRY"
     gene            complement(1980..3149)
                     /gene="nhaA"
                     /locus_tag="RJ336_001553"
     CDS             complement(1980..3149)
                     /gene="nhaA"
                     /locus_tag="RJ336_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDZ5213985.1"
                     /translation="MNNIVHKLKTLVLNEAFGGVLLIVCTLLALLVQNGSFSEHYREF
                     LNLKVGFSVGEFELNKPFLLWINDGLISIFFFAIGLELKKEFLHGDFKNPKNIVLPFM
                     AALGGILIPAMLFALVNIGDAYTLKGWAIPTATDTAFALAILMMCGKHIPSSLKIFLL
                     SLAIFDDVGAILIIAIFYTTKLSIVAFVVAGIAILAMLVLNILGITRKSFYFICSVIL
                     WISVLKSGVHATLAGIITAFFIPMQTKNGEAFLEEIYESLKFWLAFVILPLFAFANAG
                     VNLSNIDIGAIFSGVSVGIFLGLFVGKQVGVFLFSYLAIRFKFAALPQGSNLKQLYGV
                     CILTGIGFTMSLFIDGLAYEVSDIFNYADNLAILIASFCSGIWGFIYLKFFAARS"
     gene            complement(3146..4294)
                     /gene="nhaA"
                     /locus_tag="RJ336_001554"
     CDS             complement(3146..4294)
                     /gene="nhaA"
                     /locus_tag="RJ336_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDZ5213986.1"
                     /translation="MQMIKKMVLSETFPGILLIFFTFLALLCKNSSLSVIYTDFFHAN
                     FTVGFDHFQISKSLDLWINDGLIAIFFLCIGLELKYEILRGQLKNIRAVSLPIFGALG
                     GMITPALIFAAINYSHDFAMKGWAIPTATDIAFAVGILMLLGNKIPTSLKLFLLSLAI
                     FDDLGAIVIIALFYTDQLSALAIIICLFCIFALLLLNYYHITHLSLYVLVGVVLWIAM
                     LKSGVHATLAGVIISLFIPLDTKNKKPYLHEVLKDLNPWVVYFILPLFAFANAGIDIR
                     DMHLGSVFSPVSLGIILGLFLGKQLGVFTFCFIAIKLKLAKLPENIKYGKFYGICILT
                     GIGFTMSLFIDGLAYKNSDIFEHADKLAILIASFLSAIVGFIYLKIVK"
     gene            complement(4436..4618)
                     /locus_tag="RJ336_001555"
     CDS             complement(4436..4618)
                     /locus_tag="RJ336_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfB family protein"
                     /protein_id="HDZ5213987.1"
                     /translation="MVSDVSMGNANLMTAVNTSVLKKSMDTNEALMNELIEGMEGVSQ
                     ASAPQVSSSSGLDIYA"
BASE COUNT         1811 a          915 c          590 g         1486 t
ORIGIN      
        1 atcatagaaa gaatttcagc acgcccatta atcacagcaa cacaatgttc ataatgagcc
       61 gcattaagcc catcaatact tccagcatcc cattttccat tataatgctt tggtgttcca
      121 tctttttggc atatcatagg ctctatgcaa aacaccattc catttttaat tttagggcca
      181 ctttttgcac tcgcaccttt ttctaaatag tttaaaattt caggctctcc atgaggcttt
      241 cgtcctatac catgcccgca atatccacga agcgggacaa aacctcttgt atggataaat
      301 tcgcctaaag cagctgaaag ttccttaaaa cgcattccat catgaataat atctatagca
      361 tggtataacg catctttagc acaagagatt aaagctttat cagtgggtga aacttctcct
      421 atagcaatag ttcttgctgc atccccataa tacccatcaa tcaaacttcc cacatcaaga
      481 cctaaaatat caccctcttt gataatttta tcatctggaa ttccatggat gcaaacttga
      541 tttaaagatg tacaaatggc acctggaaaa ccataaagtc ccttaaatga tggcttggcg
      601 ccaaggctta aaatataatc ttctgccatt ttatcaattt gttttaagct cattcctatt
      661 ttaatttcat tctctaaaaa atttaaagtt tttgctacaa tttgatttgc tattcttaat
      721 ttttctattt catctggttt tttcaattct atcattttat ttccttataa atttagccaa
      781 attttagcag tattttttaa agattcaaca tcgcttgaag cataaaaatg taattttgct
      841 ttatgatttt tcaaatctat attttctctt tctttaagaa attcaactat agcatctcct
      901 gaatgaatta attttgtttt atcaccaaaa tacttactta aagaacgtcc tagtaaaggg
      961 aaatgagtgc aagcgagtat caaagcatct ggagttgtga tatttttaaa ataatactcc
     1021 atagcacttt gcaaaaaatc tccttcaaaa ataccttctt caaccatagg cacaaaaagc
     1081 cctgtagcta aagcatttat atttgtatat ccttgagata acaaacgctt ttgatattct
     1141 tctgatttaa tggttgcttt tgtcgcaatg actaaaattt ctttattttt atcatgcaaa
     1201 gcttttatcg ttgcttcaac ccctgcatca attacgccat atactggaaa atgtgctttt
     1261 gctcttaaag catctaaagc ataagcacta gcagtattgc atgcaatgat aagcatatca
     1321 atttgaaatt gttcaaaaaa ttccaatgct tcaagacaga actttataat agtatcttta
     1381 tctttcaccc cataaggaac tcttgcggta tctccataat agataatttc atcaaaaagt
     1441 ctagcttcat aaagagattt taaaacacta agccctccta ctccgctatc aaatacacct
     1501 attttcactt taataccttc ttgctcctat ataacgagcc ttccaataag agttatttag
     1561 ctcgacttct tttactccac ctttagtaga taaatgtata aattttccct tgctcatata
     1621 aataccaaca tgcataccat ttggccctct acctgtctta aaaaacacca aatctcctgt
     1681 ttgcaatttt gatttagaaa cttttcttcc agaacctaat tgagtttttg tagtgcgagg
     1741 tatgcgtata ttaagctgag ctaatgcgct ctgtgtaaat cctgaacaat cagcaccttt
     1801 tttactagtt ccacctaaaa cataaggagt ttttttccat tcatgtgcta tagtcttaag
     1861 ttttgtttct ttatttgtat tataaatcgg acgagtatag tttaaatttt gataaaaact
     1921 acatccgctt ataaagaata taatcgtgat gatgaaaaaa atatgcctca tcaatcccct
     1981 taagatcgag cagcaaagaa tttaagataa ataaaacccc aaatcccaga acaaaatgaa
     2041 gctatgagaa tagctaaatt atctgcataa ttaaaaatat cgctaacttc atacgccaag
     2101 ccatcgataa acaaactcat tgtaaaacca attcctgtaa gtatacaaac cccataaagt
     2161 tgtttcaaat ttgaaccttg gggcaaggct gcaaatttaa agcggattgc caaataagaa
     2221 aacaaaaata cacccacttg tttacccaca aaaagcccca agaaaatacc tacacttaca
     2281 cctgaaaaaa ttgctcctat atcgatattg gataaattta ccccagcgtt agcaaaagca
     2341 aataaaggca agataacgaa agcgagccaa aattttagac tttcatagat ttcttctaaa
     2401 aatgcttctc catttttagt ttgcatcggt ataaaaaatg ctgttatgat tccagctaaa
     2461 gttgcatgca caccactttt taaaacacta atccaaagaa taactgagca aataaaataa
     2521 aaagactttc ttgttattcc taaaatattt aaaacaagca ttgccaaaat agcaattcct
     2581 gcaacgacaa aagcaactat tgataatttt gtcgtataaa aaatagctat aattaaaata
     2641 gcacccacat catcaaaaat agccaaagaa agtaagaaaa tttttaaact tgatggaata
     2701 tgtttgccac acatcattaa aatcgctaag gcaaacgctg tatctgtggc tgtaggtata
     2761 gcccaacctt ttaaagtata agcatctcct atatttacca aagcaaacaa catcgcaggt
     2821 ataagtatac cccctaaagc agccataaaa ggtaaaacaa tatttttagg atttttaaaa
     2881 tccccgtgca aaaattcctt tttaagctca agccctatag caaagaaaaa tatagatata
     2941 agcccatcat ttatccaaag taaaaaaggc ttgttaagct caaattcacc tacactaaat
     3001 ccgactttta aatttagaaa ttctcgataa tgttcgctaa aagatccatt ttgcacaagc
     3061 aaagcaagca aagtacaaac tataagtaaa acaccaccaa aagcctcgtt taaaactaaa
     3121 gtttttaatt tatgtactat attattcatt taacaatctt aagataaata aaaccaacaa
     3181 tggcacttaa aaaactagct attaaaatag caagtttatc cgcatgttca aaaatatcac
     3241 tatttttata agccaaacca tcaataaaca aactcatcgt aaaaccaatg cctgttaaaa
     3301 tacatatacc ataaaatttt ccatatttaa tattttcagg tagttttgca agcttaagtt
     3361 tgatagcaat aaaacaaaaa gtaaaaacac ctagttgctt tcctaaaaat aatcctagaa
     3421 taattccaag gcttacaggc gaaaataccg aaccaagatg catatctctg atatcgatcc
     3481 cagcattagc aaaagcaaat aaaggcaaga taaaataaac cacccaagga tttaaatcct
     3541 taagaacttc atgcaaataa ggttttttat tttttgtatc aagcggtata aataaagaaa
     3601 taatcacacc agccaaagtc gcatgtactc cacttttaag catagctatc cacaatacaa
     3661 cacctactaa cacatacaaa gaaagatggg ttatgtgata ataatttaac aaaagcagag
     3721 caaatataca aaacaagcaa ataataatcg ccaaagctga aagctgatct gtataaaata
     3781 aagcaataat aacaatagcg cccaaatcat caaaaatagc taaagaaagt aaaaaaagct
     3841 ttaaacttgt aggaatttta tttcctaaaa gcatcaaaat gcccactgca aaagctatat
     3901 cggttgctgt aggtattgcc caacctttca tagcaaaatc atgggaataa ttaatagcag
     3961 caaaaattaa agcaggagta atcatacccc ctaaagctcc aaatataggt aaagatacag
     4021 ctcttatatt tttaagctgt ccgcgtaaaa tttcatattt taactcaagc cctatacata
     4081 gaaaaaatat agctatcaaa ccatcattta tccataaatc caacgacttt gaaatttgaa
     4141 aatgatcaaa tcctactgta aaattagcat gaaaaaaatc tgtataaata acacttaaag
     4201 aagaattttt acataataag gctaaaaatg taaaaaatat aagcaaaata ccagggaaag
     4261 tttcacttaa aaccatcttc tttatcattt gcatccttgc tcctaaataa atattataaa
     4321 aatttaatac gataaataaa atggcaaaat tataacgaaa aaatactaaa gaaataatta
     4381 tttaaaaaaa caagctcaag ataccaacaa gttcttaagc ttgttcttaa gatatttaag
     4441 cgtaaatatc caaaccacta gagctagaaa cttgtggagc ggaggcttga gagacacctt
     4501 ccataccttc gatgagttca ttcatcaatg cctcgtttgt gtccatagat tttttcaaaa
     4561 ctgaagtatt aacagcagtc attaaattag cattacccat agaaacatct gaaaccatat
     4621 catcctcctt ttagattgag tcttaagact ttatttaaat cggatgatat ttttaaaact
     4681 taatattttt tactaaactt tttaaaattt ttcaaggaaa ccaatatctg aaattaaaaa
     4741 tcataaattt tttaagataa aatcctattt taaaaatttt tacactatga aacaataagc
     4801 aa
//
LOCUS       DAPWGO010000098         4657 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.100, whole genome shotgun sequence.
ACCESSION   DAPWGO010000098 DAPWGO010000000
VERSION     DAPWGO010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4657
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.100"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..616)
                     /locus_tag="RJ336_001556"
     CDS             complement(<1..616)
                     /locus_tag="RJ336_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDZ5213988.1"
                     /translation="MLKVCNLSKFYELKKHWYLKKERHIIFDNINFSLNENDNLIILG
                     KSGAGKSTLARILCFLEDPSEGEVWYENLNLHKLDKNKQRLLRKQIQYCFQDQKMALN
                     PYKKIKSLIQDGLENFNLQKNDDLILEFFDFFNLKKQILEQKPYELSGGEATRVGIIR
                     ALVLNPKLLILDEITSALDIKTSKEILTFLYDYQQKNNISYIFIT"
     gene            complement(609..1319)
                     /locus_tag="RJ336_001557"
     CDS             complement(609..1319)
                     /locus_tag="RJ336_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213989.1"
                     /translation="MKVRNLNISLKNNLLLKDINLDIKTGKTLMILGQSGVGKSLLGK
                     ALVRLLDSNFTINFDELSFHNSCIFNFNKEELRNFRSKVALVLQDAELSLYPYLDIGN
                     LCHLVLKTHTKLKQKERKDYAFSYFQKLGFENLDRLWHSYANELSLGMARRVSLALAL
                     LNQPQILICDEITASLDKENASKIISILEELKNTTALVCITHDLNLVNSLADEILMLE
                     KNSSNLYSLDEFLRYYNA"
     gene            complement(1316..2110)
                     /locus_tag="RJ336_001558"
     CDS             complement(1316..2110)
                     /locus_tag="RJ336_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ5213990.1"
                     /translation="MILFKFLIILAPLIFLFLCALFAPFLAPFDILSTHLENLHQAPN
                     FTYILGTDFLGRDLFSRLLFALRNSLIVGVGGSLLSIIFALCYLFLARCFFYVFWMRI
                     LEFFLALPAFLLMMFFQSMITSDVFLMIFLIALIHWCFIARIIESELKRLENLDFYKA
                     NIVLGRTKFRAFFKDLIPALKTLIFTLFIFNIVHAIATEATLSFFGLGLGFEIPTLGT
                     LLSESSKAVFIGAWWMILFPLLSLLLLFLPLLWLGNFLQKIWGIRS"
     gene            complement(2097..3041)
                     /locus_tag="RJ336_001559"
     CDS             complement(2097..3041)
                     /locus_tag="RJ336_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDZ5213991.1"
                     /translation="MLKRLVFSIFIAFFSTFLCFVLLHFSKGSIAYANGVNSQSKEFI
                     QRIEQNLGLDKPLLEQYKIWLFRALKGDLGVSFLSGESVLKLIKERIFNTFILGFGAL
                     MLLFLLSVFLALLGYYYKESFIDKIITFLAFNFFALPSFVLALLFVLIFGIFWKILPV
                     MGSSDIGFEDDFLNRLEHLILPVLVLVLSHLALFLRIARNFINESFSQIFIQNLYARA
                     LREKDIYFLVLKYSLSPIVAYFGGSALSFMMGTYVVESVFAYEGLGSLLFKSIIFKDY
                     PVVLALIFFSVLLAAFFTFLSDIVARILNPRLRRLDFV"
     gene            complement(3041..4576)
                     /locus_tag="RJ336_001560"
     CDS             complement(3041..4576)
                     /locus_tag="RJ336_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDZ5213992.1"
                     /translation="MLRFLIFAMLLFVNLEAKIPKDTLIIAVENEIARINPAYSEDHD
                     AVINLVFSGLTRFDENMSLKPDLAKSWDVSKDGLVYDIFLRDDVLWHDGVKFSADDVK
                     FSIEAFKNPKNNSSVYVNFEDIKSVEILNPSHVKITLFKPYPAFLDALSIGMLPKHLL
                     ENENLNTSSFNQNPIGTGPYKFVKWKKGEYVEFKANEHFYLDKVKTPRLIIKHIFDPS
                     IASAELKNGKIDAALIDVSLLNIFKNDENFGILREKSADYRALMFNFDNEFLKDLKVR
                     QALNYAVDKESIVKNLLHDYAFVANHPLERSWANFKNFKIYKYDPKKAEDLLVGAGFK
                     KNKDGNFEKDGKILEFEIWAMSNDPLRVSLAGILQSEFRKIGVVSKVVAKPAGSFDYS
                     KVDSFLIGWGSPLDPDFHTFRVFESSQDSALNDEGWNFGHYHDKKVDIALQKARNTSN
                     LEERKKYYKDFIDALYENPPFIFLAYLDFALVYNKDLKGIKTRTLGHHGVGFTWNVYE
                     WSK"
BASE COUNT         1850 a          822 c          498 g         1487 t
ORIGIN      
        1 gggttataaa tatataagaa atattatttt tttgctgata gtcatataaa aaagttaaaa
       61 tttctttaga agttttaata tcaagcgctg aagtaatttc atctaaaatc aacaatttag
      121 gatttaaaac caaagcacgg ataataccta cacgcgtagc ttctcctccg cttaactcat
      181 agggtttttg ttctaaaatt tgttttttta gattaaaaaa atcaaaaaat tctaaaatca
      241 agtcatcatt cttttgtaaa ttaaaatttt ccaaaccatc ttgtataaga cttttgattt
      301 ttttataagg gtttaaagcc attttttgat cttgaaagca gtactgaatt tgctttctta
      361 aaagtctttg tttgttttta tcaagcttgt gtaagttaag attttcatac catacctcac
      421 cctcacttgg atcttctaaa aaacaaagaa ttctagctaa tgtgctttta cctgcaccac
      481 ttttacctaa aattattaaa ttgtcatttt catttaaaga aaaattgata ttatcaaaaa
      541 taatatgtct ttcttttttt aaataccaat gctttttaag ctcataaaac ttacttaaat
      601 tacaaacttt aagcattata ataccttaaa aactcatcta agctatataa atttgaacta
      661 tttttttcta gcataagaat ttcatctgct aaagaattta ccaaatttaa atcatgagta
      721 atgcaaacta aggctgtggt attttttaat tcttctaaaa tcgatatgat ctttgaagcg
      781 ttttctttat ccaaagaagc tgtgatttca tcacaaatta aaatttgggg ttgatttaat
      841 aatgctaaag ctaggctcac ccttcttgcc atacccaaac ttaattcatt agcataagaa
      901 tgccacaaac gatcaagatt ttcaaatcct aatttttgaa aataagaaaa agcataatct
      961 tttctttctt tttgttttaa ttttgtatga gtttttaaaa caagatgaca taaatttcca
     1021 atatccaaat aaggataaag actaagctct gcatcttgca aaacaagtgc caccttagaa
     1081 cgaaaatttc taagctcttc tttgttaaaa ttaaaaatac aagaattatg aaaacttaat
     1141 tcatcaaaat ttattgtgaa attagagtct aaaagtctta ccaaagcttt tcctaacaaa
     1201 cttttaccca ctccgctttg tcctagtatc attaaagttt tacctgtttt tatatctaaa
     1261 ttaatatcct taagcaataa attattcttc aaactgatat ttaaatttct taccttcaag
     1321 atcttatacc ccaaattttt tgtaaaaaat tacccaacca taaaagaggt aaaaacaaca
     1381 aaagcaagct taaaagtgga aaaagtatca tccaccaagc acctataaaa actgcttttg
     1441 aagactcact caaaagagta cctaaagttg gaatttcaaa tcctaaaccc agtccaaaaa
     1501 aactcaaagt agcttctgtg gctatagcat gaacgatatt aaatataaaa agtgtaaaaa
     1561 tcagtgtttt taaagcaggt attaaatctt taaaaaaagc tctaaattta gttcttccaa
     1621 gcactatatt tgctttgtaa aaatctaaat tttcaagtct ttttaactca ctttctataa
     1681 ttcttgctat aaaacaccaa tgaattaaag cgattaaaaa aatcatcaag aacacatcag
     1741 aagttatcat actttgaaaa aacatcataa gtaaaaaagc aggcaaggct aaaaaaaact
     1801 ctaaaatacg catccaaaaa acataaaaaa aacatcgtgc taaaaacaaa taacacaaag
     1861 caaagataat agacaataaa gatccaccaa cacctacaat caaagaattt ctcaaagcaa
     1921 aaagcaaacg agaaaacaaa tccctgccta aaaaatcagt ccctaaaata taagtaaaat
     1981 taggagcttg atgcaaattt tctaaatgag tgcttaaaat atcaaaagga gccaaaaaag
     2041 gtgcaaacaa ggcgcataaa aacaaaaaaa ttaaaggcgc aagaatgata agaaatttaa
     2101 acaaaatcaa gccttcttaa tctaggattt aaaatcctag ctacaatatc acttaaaaat
     2161 gtaaaaaatg ctgcaagcaa aacactaaaa aatataagcg caagcacaac aggataatct
     2221 ttaaaaataa tacttttaaa aagtaaagac ccaagcccct cgtaagcaaa gacactttct
     2281 accacataag ttcccatcat aaaacttaaa gcacttcccc caaaataagc tacaatagga
     2341 cttaaagaat atttcaaaac taaaaaataa atatctttct cccttaaagc cctagcgtat
     2401 aaattttgaa taaaaatttg agaaaaactt tcattgataa aatttctagc aatccttaaa
     2461 aataacgcca aatgtgataa aacgagcacc aaaacaggca aaatcaaatg ctctaaacga
     2521 tttaaaaaat catcttcaaa gcctatatca ctacttccca taacaggtaa aattttccaa
     2581 aaaattccaa aaatcaaaac aaacaataaa gccaaaacaa aagaaggtaa agcaaaaaaa
     2641 ttaaaagcta aaaaagtgat gattttatct ataaaacttt ctttataata atatcccaaa
     2701 agtgccaaaa aaacgctgag taaaaataaa agcattaagg caccaaaacc caaaataaaa
     2761 gtattaaaaa ttctttcttt tataagcttt aaaacacttt ctccacttaa aaaagaaact
     2821 cctaaatctc cttttaaagc cctaaaaagc caaattttat actgctctaa caaaggctta
     2881 tcaagcccta aattttgttc tattctttga ataaattctt tactttgtga attaactcca
     2941 ttagcataag ctatactacc tttgctaaaa tggagtaaaa caaaacataa aaaagtgcta
     3001 aaaaatgcta tgaaaatact aaaaactaag cgttttagca ctatttactc cactcataaa
     3061 cattccaagt aaaacccact ccgtgatgac ctaaagtcct tgttttgata ccttttaaat
     3121 ctttattata aaccaaagca aaatcaagat aggccaagaa aataaaagga ggattttcat
     3181 ataaagcatc tataaaatct ttataatatt tttttctctc ttctaaattt gaagtatttc
     3241 ttgctttttg caaggctata tccacttttt tatcatgata atgtccaaaa ttccaaccct
     3301 catcatttaa agcactatct tgcgaacttt caaataccct aaaagtgtga aaatcaggat
     3361 ctaaaggact tccccagcct attaaaaaac tatctacttt agaataatca aaacttccag
     3421 caggtttagc caccaccttg cttacaactc ctatttttct aaattcgctt tgcaaaattc
     3481 cagctaaact tacccttaaa ggatcattac tcatcgccca aatttcaaat tctaaaattt
     3541 tcccatcttt ttcaaaattt ccatctttat ttttcttaaa acctgcacct acaagcaaat
     3601 cctcggcttt tttaggatca tatttgtaaa ttttaaaatt cttaaaattt gcccaagaac
     3661 gctctaaagg gtgattagct acaaaagcat aatcatgtaa aagatttttt actatacttt
     3721 ctttatcaac tgcgtaattt aaggcttgtc ttacttttaa atcttttaaa aattcattat
     3781 caaaattaaa cattaaagcc cgataatcgg ctgatttttc acgtaaaatt ccaaaatttt
     3841 catcattttt aaaaatattt agcaaagaaa catcgattaa agctgcgtct atcttgccat
     3901 ttttaagctc agcactagct atagaaggat caaaaatgtg ttttataata agtcttggag
     3961 tttttacctt atcaagataa aaatgttcat tggctttaaa ttcaacatat tcaccttttt
     4021 tccattttac aaatttataa ggacctgtac ctataggatt ttgattaaaa gagcttgtgt
     4081 ttaaattctc attttcaagc aaatgtttag gaagcattcc tatgcttaaa gcatctaaaa
     4141 atgcaggata aggtttaaaa agtgtgattt tcacatgaga aggatttaaa atttccacac
     4201 ttttaatgtc ttcaaaattg acataaacag aagaattgtt tttaggattt ttaaaggctt
     4261 ctatactaaa tttcacatca tcagcactaa atttgactcc atcatgccat aaaacatcat
     4321 ctcttaaaaa aatatcataa acaagcccgt ctttactaac atcccaagac ttagccaaat
     4381 caggttttaa actcatattt tcatcaaaac gcgtaagccc tgagaataca agattaatta
     4441 ctgcatcgtg atcctcacta taagcaggat ttatccttgc gatttcattt tcaactgcta
     4501 taataagtgt atcttttgga atttttgctt ctaaattcac aaacaacaac attgcaaaaa
     4561 ttaaaaatct caacataaaa aaaccttttt attttaataa cgcacaaaat tataaaacaa
     4621 aaaaactcaa ctcgcaagcc tatacggggg ataaaat
//
LOCUS       DAPWGO010000099         4569 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.101, whole genome shotgun sequence.
ACCESSION   DAPWGO010000099 DAPWGO010000000
VERSION     DAPWGO010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4569
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.101"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..646
                     /locus_tag="RJ336_001561"
     CDS             <1..646
                     /locus_tag="RJ336_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDZ5213993.1"
                     /translation="KYINFSFVFVIDEINRGNVSKIFGELITLIEPSKRIGEKEELKV
                     KLPYSGEEFGVPKNVYIIGTMNTADRSITSLDTALRRRFEFIEMMPDVSKLSMDCEGI
                     NLQELLKAINTRIEYLLDREKTIGHAFFISVENLESLKKVFKNRIIPLLQEYFYNDYA
                     LIDAVLNKNGMLEISVENKDYLKNMTEFIESDKVVYKFSDSNNWSKDTFIKIYE"
     gene            646..1983
                     /locus_tag="RJ336_001562"
     CDS             646..1983
                     /locus_tag="RJ336_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="McrC family protein"
                     /protein_id="HDZ5213994.1"
                     /translation="MKTSNTFSIIEHQAFSKEDLKEIFKEKAEGFYKDLEDFAKNNEN
                     LLGFKNKNSLKAKNYVGIIQTKSGVLEILPKCTNLDSYKKEDSSSNHDKEKLKRYYEL
                     DNISKNNDFYEKDFKFNPKNLLINMLKTLKNSPFKKSQISSLQSSKIPLFEVFITMFL
                     DEFDSVYKKGLMRSYLSCEENRAFLKGKLLFNEHIKRNLIHKERFFTSNDEFVLDIAP
                     NRLIKSTLNFLKSKTSLNKFRLIKAMQMLDEVEFSKNYEKDFSYKISRHFDYYENLLL
                     WCKIFLKNESFMPYHGKNEAFALLFPMEKIFEDYVAYMLKKVNPTQDIKVQNNGKYLI
                     SKNDEKCFMLKPDLYIENKMILDTKWKIPNDSEDEKKQGIEQSDLYQMFAYACKFKIY
                     DIKLVYPLCEKTQDLQRKIAEKFFVFKASEHLYFKEQGQKDIKVQVLFAPLPF"
     gene            complement(1972..2775)
                     /locus_tag="RJ336_001563"
     CDS             complement(1972..2775)
                     /locus_tag="RJ336_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDZ5213995.1"
                     /translation="MLEILNFTFFQNALLGAILVSIACGIIGTLVMINRLFSMAGGIT
                     HGAFGGIGIAFYFSLPILLSTGIFTLFLAFLVAFLAKHYEHRSDSIIAVIWAFGMAVG
                     IILIDLSPSYNTDLMAYLFGSILAVGTQDLWLMALVDSVVVLLIFLFYRQFEALSFDA
                     EFAKVRGINTSFFHYLLIALMAFCIVISIRLVGLILVMALLSIPSFIAENFTKRLGFI
                     MILASFLSMIFCVLGLILSYYLNLSSGACIIAVACFGFLAHLIGKFLKR"
     gene            complement(2768..3622)
                     /locus_tag="RJ336_001564"
     CDS             complement(2768..3622)
                     /locus_tag="RJ336_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDZ5213996.1"
                     /translation="MLFFEISNLNYAYDNEIILKNINLSYDNKDFLSIIGPNGAGKST
                     LVKLILGLLKSKNEIHFKTLQRKEIGYVPQHTLANPNFCPRVLEIVLMGLVSKKIFGF
                     YGKKDKEKAMQALKSVGMEKFWNKTIDSLSGGQRQRVFIARALASECKMLILDEPTAS
                     VDNKSAIQIFELLSSLHQKGMGILLICHDINLVLAYSDKIAHLNKELFLHTNTKEKEK
                     SSFLKHLYENHSHFCDVEMSLNTCFCDEENCDSKKLCEQEFTRRNLKKTEFKKENFCL
                     KFSKENNA"
     gene            complement(3635..4519)
                     /locus_tag="RJ336_001565"
     CDS             complement(3635..4519)
                     /locus_tag="RJ336_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HDZ5213997.1"
                     /translation="MKKIILFILSLGIFYTFTQAKNLEQEQNTSSNLVSVSIAPQAFF
                     VKKIAADTLDVNVILPPNSNEHNFEFKPSTMKKLEKSDIYFTIGLEFEKVFTDKFKQN
                     FPKLQVVNMQKNIALIQTHDIHEHSHEHEEHEHFDPHTWLDPILVQTMALNIYDALIQ
                     KYPQNKNLYKQNLDKFLAELDSLNLQIASKLEKLKNREFVVYHPSWTYFAKRYNLTQI
                     PVEILGKEPKSKDLQKLITLMKDKNLKVIFVQNGFPENAAKTLAKECDAKIYKIDHLS
                     YDWENELLKTADAFSRNL"
BASE COUNT         1710 a          614 c          681 g         1564 t
ORIGIN      
        1 taaatatatc aatttttctt ttgtatttgt tatagatgaa atcaatcgtg gtaatgtaag
       61 taagattttt ggtgagctta taaccttgat agagcctagt aaaaggatag gtgaaaaaga
      121 agagttaaaa gtaaaattgc cttatagtgg tgaagaattt ggggtgccta aaaatgttta
      181 tatcataggc actatgaata cagccgatag aagcataact tctcttgata cagctttgcg
      241 aagaagattt gaatttattg agatgatgcc tgatgtgagc aaattatcta tggattgcga
      301 aggtattaat ttacaagaat tattaaaagc tataaacact cgtatagaat atttactaga
      361 tagagaaaaa accataggac acgcattttt tataagtgtt gaaaatttag aaagtttaaa
      421 aaaggttttt aaaaatagaa tcatcccact tttgcaagag tatttttaca atgactatgc
      481 tttgattgat gcggttttaa ataaaaatgg tatgttggaa attagtgttg aaaataaaga
      541 ttatttaaaa aatatgacag aatttataga aagtgataag gttgtttata aatttagtga
      601 tagtaataat tggagtaaag atacttttat aaaaatatat gaataatgaa aacaagtaac
      661 actttttcta tcatcgaaca tcaagctttt tctaaagaag atttaaaaga aattttcaaa
      721 gaaaaggccg aagggtttta taaagatcta gaagactttg caaaaaataa tgaaaatctt
      781 ttaggcttta aaaacaaaaa ttccttaaaa gctaaaaatt atgtcggcat tatacagact
      841 aaaagcgggg ttttggagat tttgccaaaa tgcacgaatt tagatagcta taaaaaagaa
      901 gatagctctt caaatcacga taaagaaaaa ctaaaaagat actatgaatt agacaatatt
      961 tctaaaaata atgattttta tgaaaaagat tttaaattta atcccaaaaa tcttttgata
     1021 aatatgctaa aaaccttaaa aaactccccc tttaaaaaat cgcaaatttc atctttgcaa
     1081 agttctaaaa ttcctttatt tgaagtgttt atcactatgt ttttagatga atttgatagc
     1141 gtatataaaa aaggcttgat gagatcttat ctaagttgcg aagaaaatag ggctttttta
     1201 aagggaaaat tactatttaa cgagcatatc aagcgaaatt tgatacacaa agaaagattt
     1261 tttacaagca atgatgagtt tgttttagat atagcaccca atcgcttgat aaaatcaacg
     1321 ctaaattttt taaaatccaa aacaagtttg aataaattta gacttataaa agccatgcaa
     1381 atgcttgatg aggtagaatt ttctaaaaat tatgaaaaag attttagtta taaaatttca
     1441 agacattttg attattatga aaacttgctt ttgtggtgta aaattttctt aaaaaatgaa
     1501 agttttatgc cttatcatgg taaaaatgaa gcttttgctt tgctttttcc tatggagaaa
     1561 atttttgaag attatgtagc ttatatgcta aaaaaagtaa atccaactca agatattaaa
     1621 gtccaaaaca atggaaagta tttaatctca aaaaatgatg aaaaatgttt tatgttaaag
     1681 cctgatttat atatagaaaa taaaatgatc ctagatacca aatggaaaat tccaaatgat
     1741 agtgaagatg agaaaaaaca gggtatagaa caaagcgatt tgtatcaaat gtttgcttat
     1801 gcttgcaaat ttaaaattta tgatattaaa cttgtgtatc ctttatgtga aaaaactcaa
     1861 gatttacaaa gaaaaatcgc agaaaaattt tttgttttta aggcaagcga acatttgtat
     1921 tttaaagaac aagggcaaaa agatataaaa gtgcaagtgt tattcgcacc tttacctttt
     1981 taaaaatttc cctatcaaat gcgctaaaaa accaaaacaa gctacagcta tgatgcaagc
     2041 accgcttgag agattaagat aatagctaag tataagtcct aaaacacaaa aaatcatact
     2101 taaaaaactt gccaaaatca tgataaagcc aagtcttttg gtaaaatttt cagcaataaa
     2161 gcttgggata ctaagcaaag ccataaccaa aataagccct acaaggcgta tagaaataac
     2221 tatacaaaaa gccataaggg cgattaaaag ataatgaaaa aaacttgtat tgataccacg
     2281 aacttttgca aattccgcat caaagcttaa tgcttcaaat tgtctataaa ataaaaagat
     2341 caaaagtacc accacgctat caaccaaagc cataagccat aaatcttgcg ttcctacagc
     2401 taaaatgctc ccaaaaagat aagccattaa atctgtgtta taactagggc ttaaatcgat
     2461 taaaataatc ccaacagcca ttccaaaagc ccaaattaca gcgataatac tatcgcttct
     2521 gtgttcatag tgtttagcta aaaaagctac taaaaaagcc aaaaataaag taaatattcc
     2581 cgtgcttaat aaaataggta aagagaaata aaaagctata cctataccac caaaagcccc
     2641 gtgtgttata cctccagcca tagaaaaaag gcgatttatc atcaccaaag tacctatgat
     2701 cccacaagct atactgacta aaatcgctcc tagtaaagcg ttttgaaaaa aggtgaaatt
     2761 taaaatttca agcattattt tcctttgaaa attttaaaca aaaattttct tttttaaatt
     2821 ctgttttttt caaatttctt cttgtaaatt cttgttcgca tagtttttta ctatcgcaat
     2881 tttcttcatc gcaaaaacaa gtatttaaac tcatttctac atcacaaaaa tgagagtggt
     2941 tttcgtataa gtgttttaaa aatgaacttt tttctttttc tttagtattg gtatgcaaga
     3001 aaagttcttt gtttaaatgt gcaattttat cgctataagc taatacaagg ttgatatcgt
     3061 gacaaatgag taaaattccc ataccttttt ggtgcaagga gcttagaagt tcaaaaattt
     3121 gtatggcaga cttgttatca acgcttgcgg taggttcatc taaaataagc attttgcatt
     3181 cactagctaa ggctcttgcg ataaaaacac gttgtctttg tcctccgctt agagaatcaa
     3241 ttgttttgtt ccaaaatttt tccattccta cgctttttaa agcttgcata gctttttctt
     3301 tatctttttt cccataaaaa ccaaaaattt ttttacttac aagtcccata agaacgattt
     3361 caagtactct tggacaaaaa ttaggattgg ctagagtgtg ttgaggaaca tagcctattt
     3421 cttttctttg aagagttttg aaatggattt catttttgga ttttaaaagc cctaagataa
     3481 gttttacgag tgttgatttt cctgcgccat ttggacctat gatagagaga aagtctttat
     3541 tatcgtagct aagattgatg ttttttaaga tgatttcatt atcataagcg tagtttagat
     3601 tagaaatttc aaaaaaaagc atcaaaaagc ctgattataa attacgagaa aaggcatcag
     3661 cagtttttaa aagctcattt tcccaatcat aagataaatg atctattttg taaatttttg
     3721 catcacattc tttagcaagt gtttttgctg cattttcagg gaaaccattt tgaacaaaaa
     3781 tgacttttaa atttttatct ttcattagag tgataagttt ttgcaaatct ttgctttttg
     3841 gttctttgcc taaaatttct acaggaattt gcgtaagatt atagcgtttt gcaaaatatg
     3901 tccaagaagg atgataaact acaaattctc tattttttaa tttttctaat tttgaggcaa
     3961 tttgtaaatt taaactatct aattctgcta aaaatttatc taaattttgt ttatataaat
     4021 ttttattttg tggatatttt tgaattaagg cgtcataaat atttaaagcc atagtttgga
     4081 ctaaaatagg atctagccaa gtatgaggat caaaatgctc atgttcctca tgttcatgag
     4141 agtgttcgtg tatatcatga gtttgaatca aagctatgtt tttttgcata tttacaactt
     4201 gaagttttgg aaaattttgt ttaaatttat ccgtaaaaac tttttcaaat tctaagccta
     4261 tggtgaaata aatatcactt ttttcaagtt ttttcatagt gcttggttta aattcaaaat
     4321 tatgctcatt gctatttgga ggtaagataa cattgacatc tagagtatct gcagctattt
     4381 ttttaacaaa aaatgcttga ggtgctatac tgacactaac taaattgcta ctagtatttt
     4441 gttcttgctc taaattttta gcttgtgtga aagtataaaa tatccctaaa gataagataa
     4501 ataatataat ttttttcaaa atatttcctt cgatataaat tttttccaaa ttataacgat
     4561 attaagctt
//
LOCUS       DAPWGO010000100         4440 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.102, whole genome shotgun sequence.
ACCESSION   DAPWGO010000100 DAPWGO010000000
VERSION     DAPWGO010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4440
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.102"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..420)
                     /locus_tag="RJ336_001566"
     CDS             complement(<1..420)
                     /locus_tag="RJ336_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDZ5213998.1"
                     /translation="MADAHENEQRKGFWEFLQALKKGKISTPQLILMGDIFDLLIGEI
                     SATHEFAKPYIELLEELALKIEIIYLEGNHDFNLSCFFKRVKIFNLQEQPIKLNLHTS
                     KGNNLVLNNAFIKLAHGDIFLPPLLQFTLKTLRNHYLL"
     gene            complement(457..942)
                     /gene="greA"
                     /locus_tag="RJ336_001567"
     CDS             complement(457..942)
                     /gene="greA"
                     /locus_tag="RJ336_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDZ5213999.1"
                     /translation="MQKEPMSQFGYDKLAAELKDLKDNQRHAVVIEIDTARSHGDLKE
                     NAEYHAAREKQALIESRIAELSDLLARAQVIDPSSYEHDSVKFGSSVVIMDLDTEKES
                     KYTLVGICEGDLDKGYISIASPIAKAMLGKKEGDDFKVRLPKGESEFEILSINYEPLK
                     F"
     gene            complement(954..2048)
                     /locus_tag="RJ336_001568"
     CDS             complement(954..2048)
                     /locus_tag="RJ336_001568"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDZ5214000.1"
                     /translation="MKTFLVCALEPSANLHLKEVLKAYKKDFGKFELHGIYDESLCKE
                     FDLNSKPLYSSHEFSAMGFIEVLPLIFKAKQAIKELINLSFTQKIDGILCIDSPAFNI
                     PFAKALKKAGSKIPRIYYILPQVWAWKKGRIPIIESHFDILASILPFDNQFFSKSTYV
                     GHPLLDEIKEFKNQEDINHILSKKDDEKTIAFLPGSRRSEIRRLMPIFKELSQKFKGE
                     KILCIPPFNLEKLEIYGDISEFKIESNTPKVLKKADFAFICSGTATLEAALVGTPFVL
                     TYKAKAIDIFIAKLFVKLKHIGLANIFCDFAGKEALNPEFLQDKVNVLNLYEAYNKYD
                     YKAFFAKVDFLKEYLQFGSAKNLAKILSEI"
     gene            complement(2145..2897)
                     /gene="peb3"
                     /locus_tag="RJ336_001569"
     CDS             complement(2145..2897)
                     /gene="peb3"
                     /locus_tag="RJ336_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family glycoprotein adhesin PEB3"
                     /protein_id="HDZ5214001.1"
                     /translation="MKKIITLFGACALAFSMANADVNLYGPGGPHTALKDIANKYSEK
                     TGVKVNVNFGPQATWFEKAKKDADILFGASDQSALAIASDFGKDFNVSKIKPLYFREA
                     IILTQKGNPLKIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNF
                     RNNIVAFVPNSGSARKLFTQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVV
                     AKEGASKETQDFIAYLSSKEAKEIFKKYGWRE"
     gene            complement(3039..4409)
                     /locus_tag="RJ336_001570"
     CDS             complement(3039..4409)
                     /locus_tag="RJ336_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDZ5214002.1"
                     /translation="MFDFFKPKAKAIKFPKEEILPRYYKMRTWSLSGVFIGYMGYYLV
                     RNNITLSTPFIQNQLDLSKSDIGTITGSMLIAYGISKGAMSVISDKADPKKYMALGLI
                     LCALVNVLLGFSNSFYAYVGFVIALGVFQGMGVGPSFITLANWYPKKERGIYTAVWNI
                     SHNIGGGIVAPIVSLSGFALAALLGVSMADFNETYWHMNHFYVPAACAVIISLYVLYA
                     VKGSPKNEGLIDITEINEMRGIKTEEIKAVETPNLSSFEIFYRYVLKNKNAWYVAWMD
                     TFVYMVRFGLISWLPIYLLETKGFNKEQMGIAFWLFEWAAIPSTLLAGYISDKIFKGY
                     RMPPAIGAMVIIFFMIIGYFTSNNLYMVIFFAAMAGCLVYIPQFLASVQTMEVVPAFA
                     VGSCVGLRGFMSYVVGASLGTKAIGWAVDYYGSWNAGLIMLLSACILCILCSTLCHFS
                     AKKKYQ"
BASE COUNT         1498 a          812 c          610 g         1520 t
ORIGIN      
        1 aagcaaataa tgatttctta atgttttaag agtaaattgt aaaagaggtg gtaaaaaaat
       61 atctccgtga gctaatttta taaaagcatt atttaaaaca agattattac ctttacttgt
      121 atgcaaatta agctttatgg gctgctcttg taagttaaaa atttttaccc ttttaaaaaa
      181 acaagaaaga ttaaaatcat gattgccttc taagtagata atttcaattt ttaaggccaa
      241 ttcttctaaa agttctatgt aaggtttagc aaattcatgt gtagcagaga tttcgcctat
      301 aagcaaatcg aaaatatcac ccataagtat gagttgaggg gtggaaattt tacctttctt
      361 taaggcttgt aaaaattccc aaaatccctt tctttgttca ttttcatgag catccgcgat
      421 taaaatcgct ccattttgta gtaaaatttt ttatccttaa aatttcaaag gctcataatt
      481 tatagaaagg atttcaaatt cactctcacc ttttggcaaa cgcactttaa aatcatctcc
      541 ttcttttttc ccaagcatag cttttgctat tggagatgcg atggaaatat aacccttatc
      601 taaatctcct tcgcaaattc ctactaaagt atatttactt tctttttctg tatccaaatc
      661 catgatcaca acacttgaac caaatttcac actatcatgt tcatagcttg aaggatcgat
      721 cacttgagct cttgctagca agtcactaag ctctgcaata cgactttcta tcaaagcttg
      781 tttttctctt gcagcatggt attccgcatt ttctttcaaa tccccatgac tccttgctgt
      841 atcgatttct attacaacgg catggcgttg attgtctttt aaatctttta attctgcggc
      901 taatttatca tagccaaatt gactcattgg ttctttttgc atgatttatc cttttatatt
      961 tcgcttagga tttttgctaa atttttagca cttccaaatt gtaaatattc ttttaaaaaa
     1021 tcaactttag caaaaaatgc cttataatca tatttattat aagcttcata taaatttaaa
     1081 acattgactt tatcttgtaa aaattcagga tttaaagctt cttttccagc gaaatcacaa
     1141 aaaatatttg caagtcctat gtgttttaat tttacaaaaa gttttgcgat aaaaatatcg
     1201 atagcctttg ctttgtaagt aagaacaaaa ggagttccca ctaaagctgc ttctaaagta
     1261 gctgttccac tacaaataaa ggcaaaatcg gcttttttaa gcacttttgg agtgttgctt
     1321 tctatcttaa attcgctaat atcaccataa atttctaatt tttcaagatt aaacgggggg
     1381 atacaaagaa ttttttcacc cttaaatttt tgagaaagtt ctttaaaaat aggcattaaa
     1441 cgcctaattt cactacgcct tgaacctggt aaaaaggcta tagttttttc atcatctttt
     1501 tttgaaagta tatgattaat atcttcttga tttttaaatt cttttatctc atctaaaagc
     1561 ggatggccta cataagtact tttgctaaaa aattgattat caaagggcaa aatagaagct
     1621 aaaatatcaa aatgactttc tatgataggt atgcgacctt ttttccatgc ccaaacttga
     1681 ggtaaaatat aataaatgcg tggaatttta ctgcctgctt tttttaaagc cttggcaaaa
     1741 ggtatgttaa aagcgggtga atctatacat aaaatcccat ctattttttg agtaaaactt
     1801 aaatttataa gctcttttat agcttgtttt gctttaaaaa tcaaaggtaa aacttctata
     1861 aaacccatag cactaaactc atgtgagcta taaagtggct tagaatttaa atcaaattct
     1921 ttgcataaac tctcatcata aatcccatga agttcaaatt tgccaaagtc ttttttataa
     1981 gcttttaaaa cttcttttaa atgcaaattt gctgaaggct ctaaggcgca aactaaaaag
     2041 gttttcaaaa aatttcctta tcaatatttt aaacatttta tcttattttg gcttaattaa
     2101 aagaagttat ggaagaatac acgctaaaaa gcgtgtatga agatttattc tctccagccg
     2161 tattttttaa aaatttcttt agcttcctta gaacttaaat aagcaataaa atcttgtgtt
     2221 tctttgctcg caccttcttt agctactaca ttaaaagttc tataaacaac caaatctttt
     2281 tctatagcta cggcagttcc tatgtcagga ttgctttttg accagtcaat ccaagtgatc
     2341 caagcatcgg cttgatcttg tgtgaaaagc tttcttgcac ttccactatt tggaacaaaa
     2401 gctacgatat tgtttctaaa attttgtatg gtttttatat cttgagttct acctatcata
     2461 tcttcccaaa ctcccgttcc agaagtattg ctctttccag caccttcagg tacaacgatt
     2521 cttacttttt tattagccaa atcttttaaa cctttgattt ttaaaggatt gcctttttga
     2581 gtaagtatga tggcttctct aaaatacaaa ggcttgattt tactcacatt aaaatctttt
     2641 ccaaaatcac tcgctatagc taaagccgat tgatctgaag cgccaaataa aatatctgca
     2701 tcttttttag ccttttcaaa ccaagtcgct tgagggccaa aatttacatt tactttaacg
     2761 cctgtttttt cgctatattt gtttgctata tcttttaagg ccgtgtgtgg gccacctggt
     2821 ccataaaggt ttacatctgc atttgccata ctaaaagcta aggcacatgc accaaataaa
     2881 gtaataattt ttttcatagt atttcctttt atgataaatt tttattgatt gaaggtgaga
     2941 ttttagaaat tatatgttaa taaatagtta taatgtaaca aaaatattat taaaatctaa
     3001 cttttgcttg gtatttttgc aagcaaaagt taaaattgtt attgatactt ctttttagcg
     3061 ctaaaatgac ataaagtaga acaaagtata caaagaatac aagcactaag gagcatgata
     3121 agaccagcat tccaactacc atagtaatcc acagcccagc ctatagcttt tgttccaagt
     3181 gaagcaccga ctacataact cataaagcca cgaagtccta cgcaagatcc tactgcaaaa
     3241 gcaggaacga cttccatagt ttgcacactt gctaaaaatt gtggtatata gactaaacac
     3301 cccgccatag ctgcaaagaa aataaccata taaagattat ttgaagtaaa atatccaata
     3361 atcataaaga aaataatcac catagcacct atagcaggag gcattctata gcctttaaaa
     3421 attttatctg aaatatatcc tgcaagtaaa gtagaaggta tggcagccca ttcaaaaagc
     3481 caaaaggcaa tacccatttg ttctttatta aagccttttg tttctagcaa gtaaatagga
     3541 agccaagaaa taagcccaaa acgcaccata taaacaaaag tatccatcca agccacatac
     3601 caagcatttt tgtttttaag cacataacga taaaaaattt caaaactgct taaatttgga
     3661 gtttctacag ctttgatttc ttctgtttta atccctcgca tttcattgat ttcagtaata
     3721 tcaatcaaac cttcattttt aggacttcct ttaactgcat aaagcacata aagactaatg
     3781 ataactgcac aagcagcagg aacataaaaa tgattcatgt gccaatatgt ttcattaaaa
     3841 tccgccatac tcacacccaa taatgctgcc aaagcaaaac ctgaaagcga aactatagga
     3901 gcaactatcc cgcctcctat attatgtgag atattccaaa cggccgtgta aattccccgc
     3961 tcttttttag gataccagtt tgcaagagtg ataaaagaag gacctacccc cataccttga
     4021 aaaaccccaa gcgcgataac aaaacctaca taagcgtaaa aagaatttga aaaaccaagt
     4081 aaaacattta caagagcaca taaaataaga cctaaagcca tgtatttttt aggatcagct
     4141 ttgtcgctta taacgctcat tgcacccttg ctaatcccgt aagctataag cattgagcct
     4201 gtgattgttc cgatgtctga tttactgaga tcaagttgat tttgtataaa tggagttgaa
     4261 agagtgatat tatttcgcac aagataatat cccatatatc ctataaaaac cccacttaaa
     4321 ctccaagttc tcattttgta atatctaggt aaaatttcct ctttaggaaa tttaatagct
     4381 tttgccttag gtttgaaaaa atcaaacata tttaaaccct tcttactaac tttatatttt
//
LOCUS       DAPWGO010000101         4401 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.103, whole genome shotgun sequence.
ACCESSION   DAPWGO010000101 DAPWGO010000000
VERSION     DAPWGO010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4401
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.103"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            147..944
                     /locus_tag="RJ336_001571"
     CDS             147..944
                     /locus_tag="RJ336_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDZ5214003.1"
                     /translation="MFNFIITLLKTNLYFLEEKITSKSSNQTHIISLKQSDDEFLNLL
                     FSFLVPQSDEDKNFIEKTRTKIKRNEHNIALIKNPNFNALIDTGFLDTIDTLKEKLHT
                     HKTDFKDITHIILTRAHPDHIGTLMSEENLFPKAQILIDKKEYDFWIKSDRQEIKNTL
                     LKLKNIEFINHSKDLIFQNSGIKAIPAYGHTPGQNAIIIDDKIVFWGDLLHLYDIQIP
                     KPKIAIKFDIDQNEAIQTRKKLLKEFKERKLKVIGTYVPFIKPKFLD"
     gene            1032..1250
                     /gene="infA"
                     /locus_tag="RJ336_001572"
     CDS             1032..1250
                     /gene="infA"
                     /locus_tag="RJ336_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDZ5214004.1"
                     /translation="MAKDDVIEIDGTVLEALPNANFKVELDNKHVILCHIAGKMRMHY
                     IRIMPGDKVKVELTPYSLDKGRITFRYK"
     gene            1422..1535
                     /gene="rpmJ"
                     /locus_tag="RJ336_001573"
     CDS             1422..1535
                     /gene="rpmJ"
                     /locus_tag="RJ336_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDZ5214005.1"
                     /translation="MKVRPSVKKMCDKCKVVRRKGVVRIICENPKHKQRQG"
     gene            1538..1903
                     /gene="rpsM"
                     /locus_tag="RJ336_001574"
     CDS             1538..1903
                     /gene="rpsM"
                     /locus_tag="RJ336_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDZ5214006.1"
                     /translation="MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKR
                     VHELSEDEAAAIRKEIQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQK
                     TKTNARTRKGKRKTVGAKS"
     gene            1913..2305
                     /gene="rpsK"
                     /locus_tag="RJ336_001575"
     CDS             1913..2305
                     /gene="rpsK"
                     /locus_tag="RJ336_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDZ5214007.1"
                     /translation="MAKRKIVKKKVVKKNIAKGIVYISATFNNTMVTVTDEMGNAIAW
                     SSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSVGA
                     MEGIKVTFLKDITPLAHNGCRPPKRRRV"
     gene            2333..2959
                     /gene="rpsD"
                     /locus_tag="RJ336_001576"
     CDS             2333..2959
                     /gene="rpsD"
                     /locus_tag="RJ336_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDZ5214008.1"
                     /translation="MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHG
                     ARKGKISEYGLQLREKQKAKFMYGVSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDN
                     VVYRMGFATTRRFARQLVTHGHVLVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRA
                     IELTAQTGIVAWVDVEKDKRFGIFTRKPEREEVVIPVEERFIVELYSK"
     gene            2972..3985
                     /locus_tag="RJ336_001577"
     CDS             2972..3985
                     /locus_tag="RJ336_001577"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDZ5214009.1"
                     /translation="MRNITTSAYTPTEFTIENISDTVAKISAWPFEIGYGITLAHPLR
                     RLLYTSTIGYAPTAIHIDGVAHEFDSMRGMLEDVALFIINLKKLRFKIKGESNKEIVE
                     FSFKGSKEIYGKDLNNDQVEVVNKDAYLATINEDAELKFTLIVEKGIGYVPSEEIKEL
                     INDPKFIALDAFFTPVREATYDIEKVLFEDNPDYEKVVLTVTTDGQITPNEAFQNALE
                     AMYKQLSVFDKITNVRSVIKNQATSNELENTKLLQNITDLNLSARSYNCLEKAGVVYI
                     GELALMSVSELAGLKNLGKKSLDEIKNIMESIGFPVGTSKLSDNKEILKNKIAELKAQ
                     NEG"
     gene            3989..4342
                     /gene="rplQ"
                     /locus_tag="RJ336_001578"
     CDS             3989..4342
                     /gene="rplQ"
                     /locus_tag="RJ336_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDZ5214010.1"
                     /translation="MRHKHGYRKLGRTSSHRAALLKNLTIALVNSGKIETTLPKAKEL
                     RGYVERLITRARLGDFNAHRAVFALLQDKNATNKLVTEIAPKFKDRNGGYTRIIKTRI
                     RRGDAAEMAFIEFVA"
BASE COUNT         1764 a          622 c          765 g         1250 t
ORIGIN      
        1 cctagtgaag aaagtcctaa gatcttaatt tcctttgttc caaattttaa ttttctcatt
       61 gattaattac cttaaatttt aaaaacattg tttttattat actacaatca tttccaaaat
      121 attatctaaa aaatttaagg ataaatatat ttaattttat aatcactctt ttaaaaacca
      181 atctttattt tttagaagaa aaaatcacaa gcaaaagttc aaatcaaacc catataatct
      241 cacttaaaca atctgatgat gaatttttaa atttattatt ttctttttta gtgccacaaa
      301 gcgatgaaga taagaatttt atagaaaaaa ctcgcacaaa aatcaaaaga aatgagcata
      361 atattgctct gataaaaaat ccaaatttta atgctttaat agacacaggg tttttagata
      421 ctattgacac attaaaagaa aaattgcata cccacaaaac cgattttaaa gatatcactc
      481 atattatctt aacacgcgcg catcctgatc atataggaac tttaatgagc gaagaaaatc
      541 tttttccaaa agctcaaatt ttaatcgata aaaaagaata tgatttttgg atcaaaagcg
      601 atagacaaga aattaaaaac accttgctta aacttaaaaa tatagaattt attaaccact
      661 ctaaagattt gatctttcaa aattcaggca ttaaagccat acctgcttac gggcataccc
      721 caggtcaaaa tgctatcata attgatgata aaatagtctt ttggggagat ttacttcatc
      781 tttatgatat acaaatccca aaacctaaaa tcgctataaa atttgatata gatcaaaatg
      841 aggctataca aacaaggaaa aaactactta aagaatttaa agaaagaaaa ctcaaagtta
      901 tagggactta tgtgcctttt atcaaaccta aatttttaga ttaattactt aaaaattact
      961 aaaaattaag taaaaatttt aataattttt gctaaaatta tagccttttt atttcatgaa
     1021 aggagaaaat tttggcaaaa gatgatgtaa ttgaaattga tggcaccgta cttgaagcat
     1081 tgcctaatgc aaatttcaag gttgaacttg acaacaaaca tgtaatttta tgtcatattg
     1141 caggaaaaat gcgtatgcat tatataagaa taatgccagg tgataaagta aaagtagaac
     1201 ttacacctta tagccttgat aaagggcgta taacttttag atataaataa tctaagttat
     1261 ttaaaagcta attttagata aaattagagt ttttgcgaca aattacatcg aactatatga
     1321 agaagtattt ttaaaatcca ccacttattt tgaaaatagt tggttattca taaaacctga
     1381 tgtagtcgta aatcaagtgg aattcattca aggagacgct catgaaagtg agaccatcgg
     1441 ttaaaaagat gtgcgacaag tgcaaagtag ttcgccgtaa aggcgtggtt cgcattattt
     1501 gcgaaaatcc aaaacataaa caaagacaag gataaacatg gctcgtattg caggtgtgga
     1561 tttaccaaag aaaaaaagaa ttgagtatgg actaacctat atttatggta taggactttt
     1621 cacttcaaga aaaattctag ataaagtagg aatttcttat gataaaagag ttcatgagtt
     1681 aagtgaagat gaagcagcag ctatccgtaa agaaattcaa gaaaactata tggttgaagg
     1741 ggatttgaga aaacaagttg ctatggatat taaagcactt atggatttag gaagctttag
     1801 aggtttaaga cacagaaaag gcttaccagt tcgcggacaa aaaacaaaaa caaacgcaag
     1861 aactagaaaa ggtaagagaa aaactgttgg tgcaaaatca taaggataaa tcatggcaaa
     1921 aagaaaaatc gtaaagaaaa aagtagttaa aaaaaatata gcaaaaggta ttgtttatat
     1981 cagtgcgact tttaacaata ctatggttac agtaactgat gaaatgggaa atgctatcgc
     2041 ttggagtagt gcaggtggtt taggatttaa aggttctaaa aaatcaactc cttatgcagc
     2101 acaacaagca gtagaagacg ctttaaataa agcaaaagaa cacggaatta aagaagtagg
     2161 cattaaagta caaggaccag gaagcggtag agaaactgct gttaagagtg taggtgctat
     2221 ggaaggaatc aaagtaactt tcttaaaaga tatcactcca ttagctcaca atggttgcag
     2281 accgcctaag cgtcgtcgtg tctaagatat aagaaaaatt taggagaata ttatggcaag
     2341 atatagagga ccagtagaaa aattagaaag acgctttggt gttagcttag cattaaaagg
     2401 agaaagaaga ctagctggca aaagtgcact agataaacgc ccttatgcac caggacaaca
     2461 cggagcaaga aaaggtaaaa ttagtgagta tggacttcaa ttaagagaaa aacaaaaagc
     2521 taaatttatg tatggagtaa gcgaaaagca attccgtcgt ttatttgctg aagcagcaag
     2581 aagagaagga aatacagggg tattacttat ccaactttta gaacaaagat tagacaatgt
     2641 agtatataga atgggttttg ctacaacacg tcgttttgca agacaacttg taacacatgg
     2701 acatgtttta gtaaatggta aaagagtgga tattcctagc tttagagtag aagcaggtgc
     2761 taaaatcgaa attatcgaaa aaagcaaaaa caatcctcaa attacaagag ctatcgaact
     2821 tacagcacaa actggaatcg ttgcttgggt tgatgttgaa aaagataaaa gatttggaat
     2881 tttcacaaga aaacctgaaa gagaagaagt tgtcattccg gttgaggaaa gatttatcgt
     2941 tgagctttac tctaagtaat aggggctaaa tatgagaaat attacaacat ctgcttatac
     3001 gccaacagaa tttacaatag aaaacattag tgatactgtg gctaaaatca gtgcttggcc
     3061 ttttgagatc ggctatggaa tcaccctagc ccatccttta cgccgtttac tttacactag
     3121 caccatagga tatgctccaa ctgcgattca tattgatggc gtagctcatg aatttgatag
     3181 catgcgtggt atgcttgaag atgtagcact ttttatcatt aatctaaaaa aactacgctt
     3241 taaaattaaa ggcgaatcaa ataaagaaat agtagaattt agctttaaag gctcaaaaga
     3301 aatttacggc aaagatctaa ataatgatca agtagaagta gtaaataaag acgcctatct
     3361 agcaacaatc aacgaagatg ctgaactcaa attcacattg atcgttgaaa aaggtattgg
     3421 ctatgtacca agcgaagaaa ttaaagagct tataaatgat cctaaattta tagctttaga
     3481 tgctttcttt acacctgtaa gagaggcaac ctatgatatt gaaaaagttt tatttgaaga
     3541 taatcctgat tatgaaaaag tggttttaac cgtaacaact gatggacaaa tcactccaaa
     3601 tgaagctttt caaaatgctc tagaagctat gtataaacaa ttatcagtat ttgataaaat
     3661 taccaatgtt agaagtgtaa ttaaaaatca agcaacaagc aatgaactag aaaatactaa
     3721 attattgcaa aacattacag atttaaattt aagtgctaga agttataatt gtcttgaaaa
     3781 agcaggagta gtttacatag gtgagcttgc tttgatgagt gtaagtgaac ttgcagggct
     3841 taaaaattta ggtaaaaaat ctcttgatga aattaaaaac atcatggaaa gcataggttt
     3901 tcctgtggga acttctaagc ttagcgataa taaagaaata cttaaaaata aaatcgcaga
     3961 attaaaagca caaaacgaag gataaagaat gagacataaa catggatata gaaaacttgg
     4021 cagaacttca tctcatcgtg ctgccttatt aaaaaattta actatagctt tagtaaatag
     4081 cggaaaaatc gaaaccactc taccaaaagc taaagaatta agaggttatg tagaaagatt
     4141 gattactaga gcaagacttg gagattttaa cgctcataga gcagtttttg ctttattaca
     4201 agataaaaac gctaccaata aactagtaac tgaaattgct ccaaaattca aagatcgcaa
     4261 tggcggatat acaagaatca tcaaaacaag aattcgccgt ggtgatgccg ctgaaatggc
     4321 tttcatcgaa tttgtagctt aatcaaatcc tagcttttgc taggattaat acttcaatta
     4381 aatatcctaa aaataaaaag t
//
LOCUS       DAPWGO010000102         4380 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.104, whole genome shotgun sequence.
ACCESSION   DAPWGO010000102 DAPWGO010000000
VERSION     DAPWGO010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4380
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.104"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            111..1175
                     /locus_tag="RJ336_001579"
     CDS             111..1175
                     /locus_tag="RJ336_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDZ5214011.1"
                     /translation="MKYPLDCEENFEKSFLFWLAKYVKFKLNSLSNKELKNPQALAEV
                     NFALTKGVKNIDELDALAKKARNAGLSGVNTYFNPLKKVFEYLNFYKLYSLKQIDEEL
                     IVEVLASITGALSDASKKNYRIAVINFFDFLDKQNEEDEKAHIFDINLKNWAGIAGSK
                     GVKLPEFMSEEELKKFLDAIENADFRNNTVRNKLIIKIIIFTGIRVSEAINIKMGDIS
                     EENDLYIIRIRAKGNKYRVVMIKKELIYDLLKNVSINYMSKDALLFVNKKGTPLTQSY
                     VSRIVEQLLFRAGIRKQKNGAHMLRHTFATLLYKKQKDLVLVQEALGHASLNTSRIYT
                     HFDNDKLKLAAQVAKELSDS"
     gene            1165..2949
                     /locus_tag="RJ336_001580"
     CDS             1165..2949
                     /locus_tag="RJ336_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HDZ5214012.1"
                     /translation="MTLENYAIFGKYFYHDLKHTLKAFNHKESKKCFKFIEKYKNDFY
                     ILMLADYELYRYFQDKNFTSKKAYLSVFAFKKRKKFQKEDIDEEKFIPEFINFLDQDN
                     YKENFIKVKEAISKGRVYQINLTQNFKFHSKMDSFELFKLLLSRQDTEFKAFIKDETR
                     EILSFSPELFFKTKKRKIFTKPMKGTIKRDKDPIKDEENKTFLQNDTKNLSENVMICD
                     LLRNDLSKIITKKSLKTKLFEIQSHPTLHQMTSSVQGKLKKNISLYQIFKALFPCGSI
                     TGAPKLESIKFIEELEQRDRGIYCGTIGLIHKNKNKFSVAIRTLEKQDEIYTYSTGSG
                     LVWDSKFKDEFEELKLKSAILNPCDFHLFETIYFKNSQILFLKEHLLRLINSALKFNF
                     NTHKLFKDFYNILNQKSSYKEYQNFTLFKLDEKIFHKKHSLFYNFPLPFKNPHKEGIL
                     KLILYKDGRYEFQQSALKQNSNDILLLSDDKINSKSDNLYHKSSLRTFYNQHSYKWQQ
                     NLCYDIAFFNEKDELCEGSRTNLILEKNTQFYTPQIQSGMLNGVYRNFLINLGLIKEK
                     ALFKQDLFEAENIYCINSVRGLKKVKLQ"
     gene            2946..3512
                     /locus_tag="RJ336_001581"
     CDS             2946..3512
                     /locus_tag="RJ336_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDZ5214013.1"
                     /translation="MKKILFIDNYDSFSYTIIYYLKELGFECKVIKNDAFKKAKELEK
                     FDFTHLIISPGPHSPKESKLSLKAIKYFKKNKKILGICLGHQCIAEIFGGRVSKMQNP
                     MHGKISKLYFKKDPIFKGIKKEIEICLYHSLHISSMPKKCKILAHNSENIIMAIKHKK
                     YPIYGLQFHPEAVLTQKGKKILKNFMKL"
     gene            complement(3499..4371)
                     /locus_tag="RJ336_001582"
     CDS             complement(3499..4371)
                     /locus_tag="RJ336_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDZ5214014.1"
                     /translation="MGVFLVLLGGIFWAISGVLAEYLFKNNYSVDWVCFYRLLSTGLI
                     LIFLSFKAQKILVFTNLKESLSICMFGFFGLLLTQFGYFKAIYYTDAGTATMIQYCAP
                     LIIMLYLCFKNKKFPKLIEIFALILIIFALFLLATKGDIEAVVLNYWGIFWAVIGAFG
                     VAFYSLSAREVILKYGLFWIMGWASLFASFVFLLILQFDKGLIHYAFNLKAFFSMGGI
                     VFIGTIGAFCLYLKGVEYIGALRASMIASIEPVAAALMSFLFLKTRYSLLDIFAFVLI
                     ILSVILNAKKTKAS"
BASE COUNT         1803 a          652 c          546 g         1379 t
ORIGIN      
        1 ttgtatataa aaacaaactt tttcctaaaa aagctttttt ttactaagtt aatactaaaa
       61 taccttttct agttaaaaag ctaaaaattt tagatttagg aaaagttttt atgaaatacc
      121 ctttagattg tgaagaaaat tttgaaaaat cattcttatt ttggctagca aaatatgtaa
      181 aatttaaact caactcacta tctaacaaag agttaaaaaa tccacaagct ttagcagaag
      241 ttaattttgc tcttacaaaa ggtgtaaaaa acattgatga acttgacgct ctagcaaaaa
      301 aagcaagaaa tgctggttta agtggagtta atacttattt taatccttta aaaaaagtat
      361 tcgaatattt aaatttttac aagctttatt ctttaaaaca gattgatgaa gaactcattg
      421 tagaagtttt agcaagtata acaggtgctt tatcagatgc aagtaaaaaa aattaccgta
      481 ttgctgtgat taattttttt gattttttag acaagcaaaa tgaagaagat gaaaaagcgc
      541 atattttcga tatcaatctt aaaaactggg caggtatagc gggttctaaa ggggtaaaat
      601 tacctgaatt tatgagcgaa gaagagctta aaaaatttct tgatgctatt gaaaatgcag
      661 attttagaaa caatactgta cgcaataaac ttattattaa aatcatcatt tttacaggca
      721 tacgggtaag cgaagctatc aatatcaaaa tgggtgatat tagcgaagaa aatgatcttt
      781 atatcataag aataagagct aaaggcaata aatatcgtgt tgtaatgata aaaaaagaac
      841 ttatttacga tttgcttaaa aatgtaagta ttaattatat gagcaaagac gccctacttt
      901 ttgtcaataa aaaaggcact ccactgactc aatcttatgt cagtcgcata gtagaacagc
      961 ttttatttcg tgcaggaatt cgcaaacaaa aaaatggtgc tcacatgttg cgtcatactt
     1021 ttgccaccct actttataaa aaacaaaaag atttagtttt agttcaagaa gctttagggc
     1081 atgcaagttt aaatacctca agaatttaca ctcattttga taacgataaa ttaaaacttg
     1141 ccgcacaggt tgcaaaggaa ttaagtgact cttgaaaact atgctatttt tggtaaatat
     1201 ttttaccatg atttaaaaca cactttaaaa gcctttaatc acaaagaaag taaaaagtgc
     1261 tttaaattta tagaaaaata taaaaatgat ttttatattt taatgcttgc tgattatgag
     1321 ctatatagat attttcaaga taaaaatttc acaagcaaaa aagcttattt gtctgtattt
     1381 gcttttaaaa aaagaaaaaa atttcaaaaa gaagatatcg atgaagaaaa atttattcct
     1441 gaatttataa attttttaga tcaagataat tacaaagaaa atttcatcaa ggttaaagag
     1501 gcaatctcca aaggaagagt ttatcaaatc aacctcactc aaaattttaa atttcatagc
     1561 aaaatggatt cttttgaact ttttaaactt ttactttcta gacaagatac tgaatttaaa
     1621 gcttttataa aagatgaaac aagagaaatt ttgtccttct cacctgaact tttcttcaag
     1681 accaaaaaaa gaaaaatatt tacaaaacct atgaaaggca caattaagcg tgataaagat
     1741 cctataaaag atgaagaaaa taaaaccttc ttgcaaaatg atacaaaaaa tctaagtgaa
     1801 aatgttatga tttgcgatct tttacgcaac gatctttcaa aaatcatcac aaaaaaaagc
     1861 ttaaaaacca aactttttga aattcaaagt caccctactt tacatcaaat gacttcaagc
     1921 gtacaaggaa aacttaaaaa aaatatttct ttatatcaaa tttttaaagc tctctttcct
     1981 tgtggttcta ttacaggtgc tccaaagctt gaaagcatta aatttattga agaattagaa
     2041 caaagagatc gtggtattta ctgcggaact ataggtttaa tacacaaaaa taaaaataaa
     2101 tttagcgtag ccatacgcac cttagaaaaa caagatgaaa tttatactta tagcacgggt
     2161 agtggcttgg tttgggactc aaaattcaaa gatgaatttg aagaattaaa acttaaaagt
     2221 gcgattttaa atccttgtga ttttcatctt tttgaaacca tatattttaa aaattctcaa
     2281 attttatttt taaaagaaca tttattaagg cttataaatt cagctcttaa atttaatttt
     2341 aatactcaca agctctttaa agatttttat aatattttaa atcaaaaaag ttcttataaa
     2401 gaatatcaaa attttacact ttttaaactc gatgaaaaaa ttttccacaa aaaacactct
     2461 ttattttata attttcccct accctttaaa aatccacaca aagaaggaat tttaaagctt
     2521 attttataca aagacggaag atacgaattt caacaaagtg ccttaaaaca aaattcaaac
     2581 gatattctgc ttttaagtga tgataaaatt aactcaaaaa gtgacaatct ctatcacaaa
     2641 agctcgttgc gtacttttta taatcaacac tcatacaaat ggcaacaaaa cttgtgttat
     2701 gacatagctt tttttaacga aaaagatgaa ctttgcgaag gctcaagaac caatctcatc
     2761 ttagaaaaaa acactcaatt ttatactcca caaattcaaa gcggtatgtt aaatggcgta
     2821 tatagaaatt tcttaatcaa tcttggtttg ataaaagaaa aagcattatt taaacaagat
     2881 ttatttgaag cagaaaatat ttattgtatt aattccgtgc gtggtttaaa aaaggtaaaa
     2941 ttgcaatgaa gaaaatttta tttatagata attatgattc ttttagctat accatcatct
     3001 attatcttaa agaacttggt tttgaatgta aagtgataaa aaatgatgcc tttaaaaaag
     3061 ctaaagaatt agaaaaattt gatttcactc atcttatcat ctctcctggc cctcattctc
     3121 ctaaggaatc taaattaagc ttaaaagcaa tcaaatattt taaaaaaaat aaaaaaattt
     3181 taggtatatg tttaggacat cagtgtatag ctgaaatttt tggcggtagg gtttctaaaa
     3241 tgcaaaatcc catgcatggc aaaatttcta aactttattt taaaaaagat cctattttta
     3301 agggtattaa aaaagaaatt gaaatttgct tatatcattc tttacacatt agttctatgc
     3361 ctaaaaaatg caaaatttta gctcataatt cagaaaatat tattatggca attaaacata
     3421 aaaaatatcc tatttatgga ttgcaatttc accctgaagc ggttttaact caaaaaggca
     3481 aaaaaatact taaaaacttt atgaagcttt agtctttttt gcatttaaaa taacactcaa
     3541 tataatcaaa acaaaagcaa aaatatcaag caagctataa cgggttttta aaaataaaaa
     3601 actcattaaa gcagctgcta caggttctat ggaagcaatc atactagctc ttagagcgcc
     3661 tatatattcc actcctttta aatacaaaca aaaagcccct atagttccga taaagacaat
     3721 cccgcccata gaaaaaaatg cttttaagtt aaaagcatag tgaattaaac ccttatcaaa
     3781 ttgcaagatt aataaaaata caaaagaagc aaaaagactc gcccaaccca ttatccaaaa
     3841 aagaccatat tttaatatca cttctctagc acttaaagaa taaaaagcaa ctccaaaagc
     3901 tcctataaca gcccaaaaaa taccccaata atttaaaacc accgcttcaa tatctccttt
     3961 agttgcaagc aaaaacaaag caaaaataat caaaatcaaa gcaaaaattt ctatcaattt
     4021 aggaaatttt ttatttttaa agcacaaata aagcattata attaaaggtg cacaatattg
     4081 tatcatagtt gcagttccag catcggtata ataaatagcc ttaaaataac caaattgtgt
     4141 tagcaaaagc ccaaaaaatc caaacataca aatacttaag ctttctttta aatttgtaaa
     4201 aactaaaatc ttttgagctt taaaacttaa aaaaatcaaa atcaaccctg tagataaaag
     4261 cctataaaaa caaacccaat ctacgctata attattttta aaaaggtatt cagctaaaac
     4321 accgctaata gcccaaaaaa tacctcccaa aagaactaaa aatacgccca ttgcaaacct
//
LOCUS       DAPWGO010000103         4323 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.105, whole genome shotgun sequence.
ACCESSION   DAPWGO010000103 DAPWGO010000000
VERSION     DAPWGO010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4323)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4323)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4323
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.105"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(65..814)
                     /gene="mreC"
                     /locus_tag="RJ336_001583"
     CDS             complement(65..814)
                     /gene="mreC"
                     /locus_tag="RJ336_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDZ5214015.1"
                     /translation="MKNKIFYVLVLAFLVFISFYYGGLIKQNVLRVNDFVIGNFYNIK
                     DYLGEKISEHFNQANQIQQLKARNKELEDIAVKVTSFANQLNRILEDQNSTKYLPQVS
                     LTRVISYVQLNDYKKLWLDWSKIPVGKNRGLIYQGYTAGIAINKNGRAMALLQGDDQC
                     VFSVYIGKSKAPGLIQGEDGRIVVKFIPKWAKINIGDEILTSGLDNIFFSDIPVGIVN
                     RIDDEDMYQSVEVKPYVKISIPAYLYVVDNL"
     gene            complement(804..1844)
                     /locus_tag="RJ336_001584"
     CDS             complement(804..1844)
                     /locus_tag="RJ336_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HDZ5214016.1"
                     /translation="MILDQLIGFFSSDMGIDLGTANTLVLVKDKGIVINEPSVVAVER
                     ERYGSKAKILAVGKEAKDMVGKTPGNIEAIRPMKDGVIADFDMTEKMIRYFIEKTHRR
                     KSFLRPRIIISVPYGLTQVERKAVRESALSAGAREVFLIEEPMAAAIGASLPIQEPKG
                     NLVVDIGGGTTEIGVISLGGLVISKSIRTAGDKLDMSIVNYVKEKYNLIIGERTGEEI
                     KITIGSAIQLPKELSMVVKGRDQVSGLLSRIELTSEDVREAMREYLKEIADALKMVLE
                     MMPPDLASDIVENGVVLTGGGALIRGLDKYLSEIVRLPVYIADEPLLAVAKGTGKALE
                     EISLLQQLTNEE"
     gene            complement(1856..3079)
                     /gene="clpX"
                     /locus_tag="RJ336_001585"
     CDS             complement(1856..3079)
                     /gene="clpX"
                     /locus_tag="RJ336_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HDZ5214017.1"
                     /translation="MPRKCSFCNEVENPQRRILANENDDAFICEYCVEGAYSIIYGEE
                     KEFKEPKQSHNTEFKDITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKAELQD
                     DDTELFKSNILLVGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILT
                     RLLQAADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVN
                     IPPKGGRKHPNQEFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDDAKEENKA
                     LLEKIEPDDLVHFGLIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAI
                     DGVNLKFEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYKNYDIVITKEV
                     VKDNAKALLIKRKIS"
     gene            complement(3072..3863)
                     /gene="lpxA"
                     /locus_tag="RJ336_001586"
     CDS             complement(3072..3863)
                     /gene="lpxA"
                     /locus_tag="RJ336_001586"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDZ5214018.1"
                     /translation="MKKIHPSAVIEEGAQLGDDVVIEAYAYVGKDTKIGNDVVIKQGA
                     RILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKG
                     DGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFV
                     KVGEGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSRAFKTL
                     FRQGDLKENAKNLLENQESENVKKMCHFILETKRGIPVYRGKNNA"
     gene            complement(3863..4303)
                     /gene="fabZ"
                     /locus_tag="RJ336_001587"
     CDS             complement(3863..4303)
                     /gene="fabZ"
                     /locus_tag="RJ336_001587"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDZ5214019.1"
                     /translation="MIDVMQIQEILPHRYPFLLVDKITELKVKEVVRGYKNISISDHV
                     FMGHFPGHPIYPGVLILEGMAQTGGVLAFESMEDKVDPKSKVVYFTGIDGAKFRNPVR
                     PGDRLDYEMSVVKNRGNMWIFKGQAFVDGNLVAEAELKAMIVDK"
BASE COUNT         1388 a          914 c          488 g         1533 t
ORIGIN      
        1 cattaaacaa agttataata attagcaaaa atatagaaaa tttttaaaaa gtctaatcct
       61 tgacttataa attatctact acatataaat aagcaggaat actaatctta acataaggct
      121 ttacttctac actttgatac atatcttcat catcaattct attcacaatc ccaacaggta
      181 tatctgaaaa gaaaatatta tcaagtccac ttgttaaaat ttcatctccg atattaattt
      241 ttgcccattt tggaataaat ttaaccacaa tcctgccatc ttcaccttgg attaaacctg
      301 gagctttgga ttttcctata taaacagaaa aaacacactg atcatcacct tgtaaaagag
      361 ccattgctct accattttta ttaatagcta tacctgcggt atatccttga tatatcaaac
      421 cacgattttt accaacggga attttactcc aatctaacca taatttttta taatcattca
      481 attgaacata agaaataact ctagttaaag aaacttgagg taaatatttt gtagaatttt
      541 gatcctctaa aatacgattt aattgatttg caaaactagt tacctttaca gcaatatctt
      601 ctaattcttt atttctagct tttagttgct gaatttgatt tgcttgatta aagtgttctg
      661 aaattttttc tcccaaataa tctttaatat tataaaaatt acctataaca aaatcattaa
      721 cacggagaac attttgctta ataagtcctc cataataaaa agatataaaa accaaaaagg
      781 ctaagacaag aacataaaaa atcttattct tcattggtta attgttgtaa taatgaaatt
      841 tcctctaaag ctttacctgt tccttttgct acagctaaaa gcggttcatc tgcgatataa
      901 actggcaaac gtacaatttc acttaagtat ttatcaagac cacgaatcaa tgctccgcca
      961 cctgttaaaa ctacaccatt ttctactata tcacttgcta aatcaggcgg catcatttca
     1021 agaaccattt ttaaagcatc agcaatttct tttaaatact cacgcatcgc ttctcttaca
     1081 tcttcgcttg taagttcaat acgacttaaa agtccactta cttgatcgcg tccttttacc
     1141 accatagaaa gctcttttgg aagttgtatt gctgaaccta tagtgatttt aatctcttcg
     1201 cctgttcttt cacctatgat aagattgtat ttttctttta cataattaac tatactcata
     1261 tcaagcttat ctccagccgt acgaatagac tttgaaatca caagtccacc caaagaaatc
     1321 actccaatct cagtagttcc accccctata tctactacca aatttccttt aggctcttgt
     1381 ataggtaaac ttgcaccaat agctgctgcc ataggctctt caatcaaaaa tacctctctt
     1441 gcacctgcgc ttaaagcact ttctcttacc gcttttcttt ctacttgagt taaaccataa
     1501 ggaacagaaa tgataattct aggacgtaaa aaactttttc tacggtgtgt tttttctata
     1561 aaatagcgga tcattttttc agtcatatca aaatctgcaa tcacgccatc tttcatagga
     1621 cgaatagctt cgatattgcc tggagttttt cccaccatat ctttagcttc tttacctacg
     1681 gctaaaattt ttgctttgga accatacctt tctctttcaa ctgccacaac agaaggctca
     1741 tttatcacta tacccttatc ttttaccaaa actagggtat tagctgttcc taaatcaatc
     1801 cccatatcac tagaaaaaaa tcctataagt tgatctaata tcatttctat cctttttaac
     1861 ttatttttct ttttattaat aatgcctttg cattgtcttt aacaacttct ttggttatta
     1921 caatatcata gtttttatac tctggtaatt caaacattaa atctaccatc atttcttcta
     1981 taatacttct aagcccccta gcccctgttt ttctctccaa tgcaagttgt gcgatagctc
     2041 ttagggcatc ttcttcaaat tttaaattca ctccatcaat agcaaaaagc ttttgatatt
     2101 gcttaataat ggcattttta ggctcagtta aaattcttac catatcttct tcattaagct
     2161 catttaaaga tgcaatcaca tgcaaacgac ctataagctc aggaatcaaa ccaaaatgca
     2221 ccaaatcatc aggttcaatt ttctcaagta aagctttatt ttcttctttt gcatcatcaa
     2281 aaaagcccac aactttatcg ccaagttttc tttttaagat agtttccaaa ccatcaaaag
     2341 ctccaccaca aacaaataaa atatttgaag tgtcaatttg tataaactct tgatttggat
     2401 gttttcttcc cccttttggt ggaatattta ccaaacttcc ttcgataatc ttaagtaaag
     2461 cttgttgcac gccctctcca cttacatcac gagtaataga acgattttca ctcattctag
     2521 caattttatc aatctcatca ataaaaacta tacctttttg agctctttgc acatctccat
     2581 ctgcagcttg taaaagacgt gttaaaatat tttccacatc ctcacctaca tatcctgctt
     2641 cagttaaaga agttgcatca caaattgcta taggtacatc taaaaattta gctaaagttt
     2701 gtgccaataa agtttttcca cttcctgttg gcccaacaag taaaatattt gacttaaaaa
     2761 gctctgtatc atcatcttga agttcggctt taaaaagtct tttataatga ttgtatactc
     2821 caacactaaa aactttttta gctctatctt gtcctatgac ataacgatct agataagctt
     2881 ttaattcttt tggagtgata tctttaaatt ctgtattatg gctttgttta ggttctttaa
     2941 attctttttc ttctccataa ataatactat aagcaccttc aacgcaatat tcacaaataa
     3001 aagcatcatc attttcattt gctaaaattc ttctttgtgg attctccact tcattgcaaa
     3061 aactacattt tctaggcatt atttttaccc ctatagacag gaattccgcg ctttgtttct
     3121 aatataaaat ggcacatttt tttaacattt tcactttctt gattttcaag caaattttta
     3181 gcattttctt ttaagtctcc ttgtctaaat aaagttttaa aagctctgct aagtctatct
     3241 acttcatctt tatcaaaacg acgacgaata cctactaaat ttaaacttct aatacttgca
     3301 cgatttcctt ctgctaaaca aaacggtact atatcctgag aaagtgcact tgctcctgct
     3361 atcatacaac cctcacctac tttgacaaat tgatgaatag gtgtaagccc gcctacaacc
     3421 gtaaaatctc caagctctac atgtcctgct aaagttgcat tattagctaa aataatatta
     3481 ttacctaaaa gacaatcatg agcaatatga caataagcca taataaaagc attatcgcct
     3541 atacgagtaa aaccatctcc tttagctgta cctgaattta tcgttgcaaa ttctctaata
     3601 gttgcgtttt ttcctataac aacaccgctt ttttgttctt ctttataaga tatatcttga
     3661 ggaatatcac ctactatggc ataagaaaac acacgagaat gatcgcctat agttgtatct
     3721 gaaagaattc gagcaccttg tttgatgaca acatcattac ctattttagt atctttacct
     3781 acataagcat aagcttctat tacaacatcg tcaccaagtt gtgcaccctc ttcaatcacc
     3841 gcacttggat gaattttttt cattatttat ccactatcat agctttaagc tcggcctctg
     3901 caactaaatt tccatctaca aaagcttgcc ctttaaaaat ccacatatta ccacgatttt
     3961 taaccacgct catttcataa tcaagtctat ctccaggacg cacaggattt ctaaattttg
     4021 ctccatctat gcctgtgaaa taaactactt tactttttgg atccacttta tcttccatac
     4081 tttcaaaagc taaaactcca cctgtttgag ccataccttc taaaatcaaa actccaggat
     4141 aaataggatg ccctggaaaa tgtcccataa aaacatggtc acttatactg atgtttttat
     4201 atcctcgaac cacttcttta acttttaatt ctgtaatttt atctactagt aaaaaaggat
     4261 aacggtgtgg taagatttct tgaatttgca ttacatctat cattattaaa ttaaccttga
     4321 aaa
//
LOCUS       DAPWGO010000104         4170 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.106, whole genome shotgun sequence.
ACCESSION   DAPWGO010000104 DAPWGO010000000
VERSION     DAPWGO010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4170
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.106"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(23..1243)
                     /locus_tag="RJ336_001588"
     CDS             complement(23..1243)
                     /locus_tag="RJ336_001588"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDZ5214020.1"
                     /translation="MLNNTLFFKQSEIHTISSYANRINDEVKSGDIGYYHLIDTSLSL
                     IDESLAFIKDKEHIKNIVLVGMGGSSCGVKALRDMLFNEKSNQRELFILDNTSSHSFN
                     KTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFVFITDKDSKLH
                     QEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFTHKK
                     DEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIA
                     LIGARDQHSFLQLIMDGPKNKTVTFLKIKDAQKAPIIPDIHFKFLDSLSNKVNLHELL
                     NAQCDATMHALIAENLSVDVIELEKLDAWHAGYLMYYYELFTSTCGIMLGINTYDQPG
                     VEVGKLILKNILNS"
     gene            complement(1237..2061)
                     /gene="galU"
                     /locus_tag="RJ336_001589"
     CDS             complement(1237..2061)
                     /gene="galU"
                     /locus_tag="RJ336_001589"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDZ5214021.1"
                     /translation="MLQTCIFPAAGYGTRFLPATKTLPKEMLPILTKPLIHYGVDEAL
                     EAGMENMGFVTGRGKRALEDYFDISYELEHQISGTKKEYLLDEIRSLINRCTFTFTRQ
                     NQMKGLGDAVLKGKPLVGDEAFGVILADDLCVNEEGLNVMAQMVKIYEKYRCTIIAVM
                     EVPKEQVSNYGVISGNFVEENLIMVNSMIEKPSPDEAPSNLAIIGRYILTPDIFGILE
                     NTKAGKNGEIQLTDALLTQATNGMVLAYKFQGKRFDCGSVEGFVEATNYFYEKSKC"
     gene            complement(2143..4116)
                     /gene="acs"
                     /locus_tag="RJ336_001590"
     CDS             complement(2143..4116)
                     /gene="acs"
                     /locus_tag="RJ336_001590"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HDZ5214022.1"
                     /translation="MLNQNNQELFKPSKEFSRNARIKNLCEYYDLCDEAKEDFEGFWK
                     RQALEKIEWFSPFSRVLNEDKAPFYKWFEGGTLNVSYQCLDRHMKTRRNKAALIFEGE
                     MGDYEVYTYRRLLHETCKAANLLKKFGVKKGDRVVIYMPMIPETAIVMLACARIGAIH
                     SVVFGGFSPEALRDRIIDAGAKLVVTADGAFRRGKPYMLKPAVDKALSEGCESVEKVL
                     IVIRNNEPIEYIKGRDYVYNELVKNESYKCEPEIMDSEDLLFLLYTSGSTGKPKGVMH
                     ASAGYILWAQMTMEWVFDIKDYDNYWCSADVGWITGHTYVVYGPLACGATTIMHEGTP
                     TYPNSGRWWRMIEEYQISKFYTSPTAIRMLHADAPDEPRKYDLSTLEVLGTVGEPINP
                     SAWKWFYDEIGRTKSPIVDTWWQTETGGHMITPLPGATPLKPGCATLPLPGIFAEVID
                     EEGNKKDEGEDGLLCITKPWPSMIRGIWGNDERYIESYFSQARKDGKAVYFSGDGAFY
                     DKNGYITITGRTDDVVNVAGHRIGTAEIESAIAKHPSVAESAVVSILDAIKGESLFAF
                     VVLSPASSCDLGGAIETLKELNDILRVEIGPIAKIEKILYTPGLPKTRSGKIMRRILR
                     TIARGEEIKQDISTLEDSGVVEIIVKLAKAEFE"
BASE COUNT         1319 a          856 c          553 g         1442 t
ORIGIN      
        1 actctttttt aatgaatttt tatcaagaat tcaatatatt ttttaagatt aattttccaa
       61 cttctacacc aggttgatca taagtattaa ttcctagcat aataccacaa gttgaagtaa
      121 aaagttcata ataatacatc aaatatcccg catgccaagc gtcaagtttt tcaagttcta
      181 tcacatcgac acttaaattt tcagcaatta aagcatgcat agttgcatca cattgggcgt
      241 ttaaaagttc gtgaagattg actttgttac ttaaagaatc taaaaattta aaatgaatat
      301 cagggataat aggcgctttt tgagcgtctt tgatttttaa aaaagttaca gttttatttt
      361 taggtccatc cataatgagt tgtaaaaaac tatgctgatc tcttgctcca atgagtgcaa
      421 taggagttaa acctatgcgt ttgtagcctt gctttttacc taaactttca gcaataagct
      481 ggatatacca ttcattaaag cctttaaaag catcgctata tgaaaaaagt acattgatat
      541 tggcattttt gtgtgtgcaa taatgatagg ctttttgtaa aatttcatct tttttatgag
      601 taaaaaaatc ttcaaaacaa gctttagctc cttctaaaag agctttggca ttatagccac
      661 aaaaacaaag tggaactata cctacagctg aaagtatgct aaaacgacct cctacatttg
      721 cagggataaa aaagcattta atacctaaat tttcaccttc ttgatgaagt tttgaatcct
      781 tatcggtaat aaaaacaaag tattttttta attcttgcat atcaagttta aaatgttcaa
      841 taagaagttt aaaaagcgat acaacttcta tagtgctacc tgttttactg atgattaaaa
      901 acaaactttc ttcaagcttg attttctcta aagtcttatt aaaagaatgt gaacttgtgt
      961 tatcgagtat aaaaagctct ctttggttgc ttttttcatt aaaaagcata tcacgcaagg
     1021 cttttacacc acaacttgaa cctcccattc ccactaaaac aatatttttt atgtgttctt
     1081 tgtctttgat aaaagccaaa ctctcatcaa tcaggcttaa gcttgtgtca ataagatgat
     1141 aataccctat atctccactt tttacctcat cattaatacg atttgcataa gagcttatag
     1201 tgtgaatttc actttgttta aaaaaaagtg tattgtttaa catttacttt tctcgtaaaa
     1261 ataatttgtc gcctctacaa agccttctac acttccacaa tcaaagcgtt tcccttgaaa
     1321 tttataagct aaaaccatac cattggttgc ttgagttaaa agcgcgtcgg taagttgaat
     1381 ttcgccattt tttcctgctt tagtattttc taaaattcca aaaatatcag gagttaaaat
     1441 atatcttcct atgatagcaa gattacttgg agcttcatca ggacttggtt tttctatcat
     1501 agaattaacc atgataagat tttcttctac aaaatttcca gaaattactc catagtttga
     1561 aacttgttct tttggtactt ccatcacagc tatgatggtg cagcgatatt tttcataaat
     1621 ttttaccatt tgagccataa catttaagcc ttcttcattg acacacaaat catcagccag
     1681 aattacgcca aaagcttcat cgccaaccaa aggtttacct tttaaaaccg catcacctaa
     1741 gcctttcatc tgattttgtc ttgtaaaagt aaaggtgcaa cgattgatca aagagcgaat
     1801 ttcatcaagc aagtattctt tttttgtacc tgaaatttga tgctcaagtt cataagaaat
     1861 atcaaaataa tcctccaaag ctctttttcc acgccctgtg acaaagccca tattttccat
     1921 tcctgcttcc aaagcttcat caaccccata atggatcaaa ggcttagtta agataggtaa
     1981 catctcttta ggtaaagttt ttgttgcagg taaaaatctc gtcccataac ctgccgcagg
     2041 gaaaatacaa gtttgaagca taaaaatttc cttttatttt tttatcatta tagcttattt
     2101 ttatgaattt ttatgcaaca aggcaaagtt ctttttgcct tgttattcaa actctgcctt
     2161 agctaattta acaatgattt ctactactcc agaatcttcg agcgttgaaa tatcctgttt
     2221 gatttcttca cctcttgcta tagttcttaa aattcttctc attattttac cacttctagt
     2281 ttttggcaaa cctggagtat aaagaatttt ttctatttta gctataggtc ctatttctac
     2341 tcttaaaatg tcattaagtt cttttaaagt ttctatagct ccgccaagat cacaactgga
     2401 tgcaggactt aaaaccacaa aagcaaacaa tgactcgcct ttaatcgcat ccaaaatact
     2461 cactacagct gattctgcta cacttggatg tttagcaata gcgctttcaa tttcagccgt
     2521 tcctatacga tgtcctgcaa cattaaccac atcatctgtt cttcctgtga tagttatata
     2581 accattttta tcataaaaag caccatcgcc actaaaatat acagcttttc catcttttct
     2641 agcttgagaa aaataacttt ctatatagcg ttcatcatta ccccaaattc cacgaatcat
     2701 cgaaggccaa ggtttggtta tacaaagcaa tccatcttca ccttcatctt ttttattgcc
     2761 ttcttcatca ataacttctg caaaaattcc tggcaaaggc aaggtagcac aacctggttt
     2821 taaaggagta gcacctggta aaggcgtgat catatgccca cctgtttctg tttgccacca
     2881 agtatcgact ataggacttt tagttctccc tatttcatca taaaaccact tccaagcact
     2941 aggattgata ggctctccaa ccgttccaag cacttcaagc gtacttaaat catattttct
     3001 tggctcatca ggtgcatcag catgaagcat tcttatggca gttggcgaag tgtagaattt
     3061 gcttatttga tactcttcta tcattctcca ccaacgccca gaatttggat aagtaggagt
     3121 tccttcatgc attatagtcg ttgctccaca tgctaaaggc ccataaacta cataagtatg
     3181 tcctgtaatc caacccacat cagcactaca ccaataatta tcataatctt taatatcaaa
     3241 aacccattcc atagtcattt gtgcccaaag tatatatcct gcacttgcat gcataactcc
     3301 ttttggctta cctgttgatc ctgaagtgta aagcaaaaac aacaaatcct cgctatccat
     3361 gatttcgggt tcacacttat aagactcatt tttcacaagt tcgttataaa cataatccct
     3421 tcctttaata tattctatag gttcattatt gcgtataact ataagtactt tttctacact
     3481 ttcgcaccct tcacttaaag ccttatctac tgcaggtttt aacatataag gtttgccacg
     3541 acgaaaagca ccatcagctg ttactacaag tttagctcct gcatctataa tcctatctcg
     3601 caaagcttct ggagaaaatc ctccaaatac cacactatga atagccccaa tccttgcaca
     3661 agctaacatt actatagctg tttctggaat cataggcata taaattacaa ccctatcgcc
     3721 tttttttact ccgaattttt taagcaaatt ggccgccttg caagtttcat gcaataatct
     3781 tctataagta taaacttcat aatcccccat ttcaccttca aaaatcaaag cagctttatt
     3841 gcgtcttgtt ttcatatgac gatcaagaca ttgataactt acatttaaag ttccaccttc
     3901 aaaccattta taaaatggag ctttatcctc atttaacact cttgaaaaag gcgaaaacca
     3961 ctcgatcttc tcaagtgctt gtcttttcca aaaaccttca aaatcttcct tggcttcatc
     4021 gcataaatca tagtattcac ataaattttt tatacgagca ttacgagaaa attctttact
     4081 tggcttaaaa agctcttgat tattttgatt aagcataaaa actcctttat ggttattttt
     4141 aaacattata taagagttta tttgtattaa
//
LOCUS       DAPWGO010000105         4166 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.107, whole genome shotgun sequence.
ACCESSION   DAPWGO010000105 DAPWGO010000000
VERSION     DAPWGO010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4166)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4166)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4166
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.107"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            137..712
                     /locus_tag="RJ336_001591"
     CDS             137..712
                     /locus_tag="RJ336_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HDZ5214023.1"
                     /translation="MKKIFISFVVLATCLWAKNTAYTNEVVSLYLNKDDTKVIGRLLP
                     TNPFEVLKNENNRVLLKIDGYVNPKAPSVIYFNDSQRIIVAAFSKNTKLNFSQRITGK
                     NGKWDKVSLEIWADKKEFVKDNKEMLNRAKELFVNNCGICHAIHKEKEFTANAWPAIF
                     RSMADRTGIDKKDRWLVIEYLQKNAKDFKTK"
     gene            723..3239
                     /locus_tag="RJ336_001592"
     CDS             723..3239
                     /locus_tag="RJ336_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HDZ5214024.1"
                     /translation="MLDRRKFLKIGASLSALPLIPSLSAGKTVEASKVNLGLVKNGEV
                     ITAAHWGILKLTIKDGKIVKSEPWEKVTKMDNPLQHYTADMVYKSRVKYPYVRKSYLE
                     NPDNPKPELRGKDEFVRVSYDEAVKLIAKELKKTRDSKGASAIFGGSYGWKSSGNMQN
                     SRILLHRFLNVTGGFVGATGDYSTGASQVIMPYVVGSIEVYEQQTSWENILSDSKYVV
                     IWGADPLSTLRIAWTSNEQRGLAYFEKLKDSKIKVICIDPVKTTTAKFLNAKWIAPRP
                     NTDVALMMGMASHLIAKKKVNYEFLDTYTTGFDKFKDYLEGKEDGVKKDTKWASKICG
                     IDEKTIKNLAETFYDNSTMIMSGWGMQRAHHGEQPHWMLVTLCAMLGQIGTKGGGFGL
                     SYHYSNGGVPTCKGGVIGGMTAGSLGIWKNGKFKGLAKSETSNEGAEWLQNAASYSFP
                     VARIADALLHPGKTIDHNGAKITYPDIDFIYWVGGNPLVHHQDTNTNVKAWRKPRTVV
                     VNEIYWTPTAKMADIVMPVTSSYERDDITMTGDYSNMHIAPMRQAVEPVGESKDDYVI
                     FSDICKIYGKDVFNAYTENGKKAKDFIKEYYNSALKQTQSFGEAFATPMPSFEEFWAK
                     NKPITFEPTAESLEWTRFSEFIEDPILNALGTDSGLIEIYSETIKNYNYDDCKAHPTW
                     FEPIEWLGNASKEAPFHLLTNHPRDRLHSQLCHTSLRDTYAIKDREPILINSKDAKKL
                     GIKNGDVVRVFNKRGEVLAGAVVSDEIMQGVVRLCEGAWYDPNENGLCKCGNANVLTM
                     DIPTSKLANGNISHTGLVNIEKFKGELPKLTAFSAPKGAN"
     gene            complement(3263..4138)
                     /gene="zupT"
                     /locus_tag="RJ336_001593"
     CDS             complement(3263..4138)
                     /gene="zupT"
                     /locus_tag="RJ336_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HDZ5214025.1"
                     /translation="MQFTFEQIFIAMLLTLFAGFSTAIGSIIAFFSRKDDLRVLSLGL
                     GFSAGVMIYISFMEILPTALKDFKNHYDSHWAELLGLACFFGGILMSLLIDKLIPEDV
                     NPHEPKEDLSELKICPLPQKGQNPPKFHPGEKLHQINTKALKRTGIFTALAIAIHNFP
                     EGFATFISSLDNLTLGIAIAIAVAIHNIPEGLAVSLPIYHATGDKKKAFIYSALSGLA
                     EPLGAFVGALILLPFIGDLTLAISFAVIAGIMVFISLDELLPAAKTYDKAHDSLYGLI
                     VGMAIMALSLNLLGQ"
BASE COUNT         1544 a          686 c          763 g         1173 t
ORIGIN      
        1 aatttattat atcaataaag aataatatta aagcactaaa aataagtaat cttagtaaaa
       61 attatacaat taagtaataa ttaaattgca tagtattaaa atacatttac atcaaattta
      121 tattaaggaa ttagtaatga aaaaaatttt catttctttt gttgtcctag cgacatgttt
      181 atgggcaaaa aataccgcct ataccaatga agttgtatcg ctttatctta ataaagatga
      241 tactaaagtc ataggaagac ttttacctac aaatcctttt gaagtgttaa aaaacgaaaa
      301 taacagggtt ttgctaaaaa ttgatggtta tgtaaatcct aaagcacctt ctgtgattta
      361 tttcaatgac tctcaaagaa ttattgttgc agctttttct aaaaatacaa aattaaattt
      421 ctctcaaaga ataactggaa aaaatggcaa atgggataag gtaagccttg aaatttgggc
      481 agataaaaaa gaatttgtca aagacaataa agaaatgtta aatcgagcca aagagctttt
      541 tgtaaataac tgcggaattt gtcatgctat ccacaaagaa aaagaattta cagctaacgc
      601 ttggcctgca attttccgtt ctatggctga tagaacaggt attgataaaa aagacagatg
      661 gctagttata gaatacttac aaaaaaacgc aaaagatttt aaaacaaaat aaggagaaaa
      721 gcatgctaga tagaagaaaa tttttaaaaa ttggagcgag cttaagtgct ttacctctca
      781 tcccaagctt aagtgcagga aaaaccgtag aagcttcaaa agttaacctt ggacttgtaa
      841 aaaatggaga agtgatcacc gcagcacact gggggatttt aaaactcact ataaaagatg
      901 gcaaaatagt aaaaagcgaa ccttgggaaa aagttacaaa aatggataat cctttacagc
      961 actataccgc cgatatggtt tataaatctc gtgtgaaata cccttatgtg cgtaaatcct
     1021 accttgaaaa tcctgacaat cctaaacctg agcttcgcgg aaaagatgaa tttgttcgcg
     1081 taagttatga tgaagcagtc aaacttatcg ctaaagagct taaaaaaaca agagatagta
     1141 aaggtgcaag tgcaattttt ggtggaagtt atggctggaa atcaagtgga aatatgcaaa
     1201 actcacgtat cttgcttcat agatttttaa atgtaacagg tggatttgta ggagctacag
     1261 gggactattc tacaggagct tctcaagtga ttatgcctta tgttgtagga tcgattgaag
     1321 tttatgagca acaaacctcg tgggaaaata tcttaagcga ttctaaatat gttgtgattt
     1381 ggggtgctga tccactttct actttacgca tagcttggac ttcaaacgaa caaagaggtt
     1441 tggcatactt tgaaaaactt aaagacagta aaatcaaagt aatttgtata gatcctgtaa
     1501 aaaccactac agcaaaattt ttaaatgcca aatggatagc tccacgccca aataccgatg
     1561 tagctttaat gatgggcatg gcaagccatt taatcgctaa gaaaaaagtc aattacgagt
     1621 ttttagacac ttacactaca ggctttgata aatttaaaga ctatttagaa ggcaaagaag
     1681 atggagtgaa aaaagatacc aaatgggcaa gtaaaatttg cggtatcgat gaaaaaacta
     1741 tcaaaaattt agctgaaact ttttatgata attctactat gattatgagt ggttggggta
     1801 tgcaaagagc acatcatggc gaacagcctc actggatgtt agttactctt tgtgcgatgt
     1861 taggacaaat cggcacaaaa ggaggcggtt ttggactaag ctaccattac agcaatggcg
     1921 gtgttccaac ttgcaaaggc ggagttatcg gcggtatgac agcaggtagc ttagggattt
     1981 ggaaaaatgg taaatttaaa ggtttagcaa aaagcgaaac ttcaaacgaa ggtgcagaat
     2041 ggcttcaaaa tgcagcgagt tattctttcc ctgtagcaag aattgctgat gctttacttc
     2101 accctggaaa aaccatagat cataatggtg ctaaaatcac ttatcctgat attgatttta
     2161 tctactgggt aggtggaaat cctttagtgc atcatcaaga taccaacact aatgtaaaag
     2221 catggagaaa accacgcacc gttgtggtaa atgaaattta ctggactcca acagctaaaa
     2281 tggcagatat tgttatgcct gtaacttcat cttatgaaag agatgatatt accatgacag
     2341 gagattattc aaatatgcat atagctccta tgagacaagc agttgagcct gtgggtgaaa
     2401 gcaaagatga ttatgtaatt ttctctgata tttgtaaaat ttatggaaaa gatgtcttta
     2461 atgcctacac agaaaatggc aaaaaagcta aagatttcat caaagaatac tacaacagtg
     2521 ccctaaaaca aactcaaagt tttggcgaag cttttgccac tcctatgcca agttttgaag
     2581 aattttgggc taaaaataaa ccaatcactt ttgaaccaac agctgaaagt ttagaatgga
     2641 ctcgtttttc agaatttata gaagatccta tcttaaatgc tctgggtaca gattcaggac
     2701 tcattgaaat ttactcagaa acgattaaaa attataatta tgatgattgt aaggcacatc
     2761 ctacttggtt tgagcctatt gaatggcttg gaaatgcaag caaagaagca cctttccact
     2821 tacttacaaa tcacccaaga gatcgcttgc actctcaact ttgccacaca agcttaagag
     2881 atacttatgc aataaaagat agagagccga ttttaatcaa ttccaaagat gcaaaaaaac
     2941 ttggtataaa aaatggcgat gtagtgcgtg tgtttaacaa acgcggtgaa gttttagcag
     3001 gggcggttgt aagtgatgaa atcatgcaag gggttgtaag actttgcgaa ggtgcttggt
     3061 atgatcctaa tgaaaacgga ctttgcaaat gtggaaatgc aaatgtttta accatggata
     3121 taccaacttc aaaacttgcc aatggcaata tctctcacac aggactcgta aatatagaaa
     3181 aattcaaagg tgaactacca aaacttactg ccttcagcgc gccaaaaggt gcgaactaaa
     3241 tttaagaaag ccgcaaggct ttctattgtc caagcaaatt taaacttaaa gccattattg
     3301 ccattcctac tataagtcca tataaactat catgagcctt atcataagtt tttgcagcgg
     3361 gcaaaagctc atcaagggat ataaaaacca taattcctgc aatcacagca aaacttatag
     3421 ctaaagtaag atcgcctata aaaggcaata aaatcaaagc tccaacaaaa gcacccaaag
     3481 gctctgctaa acccgaaaga gctgaataaa taaaagcttt tttcttatct cctgtagcat
     3541 ggtaaattgg caaactcaca gccaaacctt ctgggatatt gtgtatagcc acagctatag
     3601 ctatagcaat tcctaaagta agattatcaa gacttgaaat aaaagtagca aaaccttctg
     3661 ggaaattatg tatagcaata gccaaagctg taaaaatccc tgtacgtttt aaagctttag
     3721 tattgatctg atgcaacttt tctccaggat gaaatttcgg aggattttgt cctttttgag
     3781 gcaagggaca aatttttaac tcgcttaaat cctctttagg ctcgtgagga ttgacatctt
     3841 cggggattaa tttatcaatc aataaagaca ttaaaattcc accaaaaaaa caagctaatc
     3901 ccaaaagctc agcccaatgc gaatcatagt gatttttaaa atctttaagt gcagtaggta
     3961 aaatttccat gaaagaaatg tatatcatta ctccagctga aaaaccaagc cccaaagaaa
     4021 gcactcttaa atcatctttt ctggaaaaaa aggctattat agaacctata gccgtagaaa
     4081 aacctgcaaa aagagtcaat agcattgcga taaaaatttg ttcaaatgta aattgcatta
     4141 atattcttaa ataaataata ttttaa
//
LOCUS       DAPWGO010000106         4155 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.108, whole genome shotgun sequence.
ACCESSION   DAPWGO010000106 DAPWGO010000000
VERSION     DAPWGO010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4155)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4155)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4155
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.108"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            30..3770
                     /locus_tag="RJ336_001594"
     CDS             30..3770
                     /locus_tag="RJ336_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /protein_id="HDZ5214026.1"
                     /translation="MHFTLLNEKDFFNPYYRKKQIMQNEFDIFNKALMQYLERLESSQ
                     SENEDYLVANALSPFLTMLNFKTHIKTKQKGKSEIDLSISKDEFSKDLEVLIEAKKPN
                     SKEFITHTKVNSKALHETILYYFRNREYSFSLKFIIITDFYKFYIFKISEFEELFYKN
                     PSFKKLFEEFCNPNSLFKGNTEEFYKEVAKLIENSKENLKGFLIDLTFLKDKQKSNFK
                     NLASIYKTFHRDFLLSEFNPNDANSLNNAFYKELLYILGLCESKQNSKLIIAKSEESK
                     EEQGTFYTTINSKLKEENFETILKLLILWLNRILFLKLIESNLVRFNDDKNLKFLNFK
                     KIPDFDKLSELFFEVLAKEKSTRKKSEFAYLPYLNSSLFEKQSIENTLEISSLSNDLK
                     LFYYKNTVLKDDKCKAKKGQVGLLEYLFEFLDSFDFGSDDEQSEILSQKELISSSVLG
                     NVFEKLNGYKEGSFYTPSFITSYMCKESITKVVLDKFNAQFDLDAKDISELRKSLRKE
                     DKKAQKELLNSIKICDPAVGSGHFLVSALNVMLSIYDELNLFDEEFYLEVQNDEILIT
                     GRKGEFIEYKRPTTPKDKAHLIQQELFYTKKDIIENNLFGVDINPNSCEITKLRLWIE
                     LLKHSFYQSFDDENYHDLKTLPNIDINIKCGNSLVSYFETGKSLNHYPNIKERMGKYK
                     RIVKDYKEGFYTDKSYINQEIKNLKISFKNFCFADKFKKEMKSFNDKCEKYSKKYGNF
                     LAVDDENLKFFVSANLTLFDFDEKEATKEFVNLKKEYDNIFNLESNHPFEWRFEFPEI
                     LDDDGNFKGFDLIIGNPPYIRQEELKELKPHLAKNYKVYKGTSDIYTYFYELGFNVLK
                     DNGVLSYITSNKYTRAGYGEALREFLLKNVKVLEYTDLNGIKVFDSATVDTSILCFEK
                     SKSKDNKFKYLALSNEILKTCAYDIGLYKDFAEFSQNSLSKESFTFSDENTSALKAKT
                     ERIGTPLKEWQGLNIYRGILTGYNEAFIITTEKRNEILANCKDEAEKERTAKLIRKML
                     RGRDIKRYSYEWAGLWVINTHNGYKNQNGEKVEAINIKHYPSLKKHFDEFYPQLEKRA
                     DKGLTPYNLRNCAYIEEFEKEKIVYPCIMAKEPYFSYETSFAFAMAPANIITSNSDIL
                     KYILAFLNSDFIYLMLRKFYMGGGIEGELKTNNLEKLPIPKINSKNQKLADELINLVD
                     EILKAKEQDKNANTQELENKINSLVYKLYNLTEEEIKIIEGR"
     gene            3772..>4155
                     /locus_tag="RJ336_001595"
     CDS             3772..>4155
                     /locus_tag="RJ336_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HDZ5214027.1"
                     /translation="MKYKWIVKNAYIDFKLNNLYMLINPSDKIYLEEDVCYYLEIYIK
                     YRIFNNCILVCDMLDNWWKLISSTLHLDKSHIKYNYLSNTFIVSDFELGIKLESNLLT
                     KFNFEFYNGLILNQLSITNGLSFKRE"
BASE COUNT         1641 a          579 c          646 g         1289 t
ORIGIN      
        1 atacaaaata ttttttataa aggttaaaaa tgcatttcac tttgctaaat gaaaaagatt
       61 ttttcaaccc atactaccgc aaaaagcaaa tcatgcaaaa tgaatttgat atatttaaca
      121 aggctttaat gcagtattta gaaagacttg aaagttcgca aagtgaaaat gaagattatc
      181 ttgtagctaa tgcacttagt ccatttttaa ccatgttaaa tttcaaaact cacatcaaaa
      241 ccaagcaaaa aggcaaaagt gagattgact tatccatctc taaagatgag tttagtaaag
      301 acttagaagt tcttattgag gctaaaaagc caaattcaaa agaatttatc actcatacaa
      361 aagtaaattc taaagcctta cacgagacta ttttatatta ttttagaaat agagagtata
      421 gttttagctt aaaatttatt atcatcacag atttttataa attttacatt tttaaaatta
      481 gtgagtttga agagcttttt tataaaaatc caagttttaa aaaacttttt gaagaatttt
      541 gtaatccaaa ttcacttttc aaaggtaata ctgaagaatt ctataaagaa gtagccaaac
      601 tcatagaaaa ttccaaagaa aacttaaaag gctttttgat tgacttgacg tttttaaaag
      661 acaaacaaaa atcaaatttt aaaaacctag caagtattta taaaactttt catagagact
      721 ttttgctaag tgagtttaac cccaacgatg caaattcact caacaatgct ttttacaaag
      781 agcttttata tatcttaggg ctttgcgaga gcaaacaaaa ctcaaaactc atcatcgcaa
      841 aaagtgaaga aagcaaagaa gagcaaggca ctttctacac cactataaat tctaagctta
      901 aagaagaaaa ttttgaaacc atcttaaaac ttttgatctt atggcttaat cgcattttgt
      961 ttttaaagct tatagagtca aatttggtgc gttttaatga tgataaaaat ttgaaatttt
     1021 taaattttaa aaaaatcccc gattttgaca agcttagcga acttttcttt gaagttttag
     1081 ccaaagaaaa aagcacgcga aagaaaagcg aatttgctta tctgccttat ttaaattctt
     1141 ctttgtttga aaaacaaagc atagaaaaca cacttgaaat ttcaagctta agcaatgact
     1201 taaagctttt ttactataaa aacaccgtgc taaaagatga taaatgcaag gctaaaaaag
     1261 gacaagtggg gcttttggag tatttgtttg aatttttaga tagttttgat tttggtagcg
     1321 atgatgagca aagcgaaatt ttaagccaaa aagaactcat aagttcaagt gttttaggaa
     1381 atgtgtttga aaaactcaat ggctacaaag aaggaagttt ttacacgcca agctttatca
     1441 cttcttatat gtgcaaagaa agcatcacaa aagttgtact tgataaattc aacgctcaat
     1501 ttgatcttga tgctaaagat ataagtgaac taagaaagtc tttaagaaaa gaagacaaaa
     1561 aagcacaaaa agagctttta aactctataa aaatttgcga tcctgcggtg ggaagtgggc
     1621 attttttggt ttctgcttta aatgttatgc tgagtatcta tgatgagcta aatctttttg
     1681 atgaagagtt ttacctagaa gtgcaaaacg atgaaattct catcacgggt agaaaaggcg
     1741 agtttataga gtataaacgc ccaacaacac ctaaagataa agcccatctt atccagcaag
     1801 agctttttta cactaaaaaa gacatcatag aaaacaacct ttttggagtc gatatcaacc
     1861 ctaactcatg cgagatcacc aagctaaggc tttggataga gcttttaaaa catagctttt
     1921 atcaaagctt tgatgatgag aattatcacg atcttaaaac attgccaaac atcgatataa
     1981 acataaaatg cgggaattct ttggtgtctt actttgaaac aggcaaaagc ctaaaccact
     2041 atcctaacat caaagaacgt atgggcaaat acaaacgcat agtaaaagac tataaagaag
     2101 gtttttacac tgataaaagc tacatcaacc aagagataaa aaatctcaaa atttctttta
     2161 aaaatttctg ttttgcagat aaatttaaaa aagaaatgaa aagctttaac gataaatgtg
     2221 aaaaatactc taaaaaatac ggaaatttct tagccgtaga tgatgaaaat ttgaaattct
     2281 ttgttagtgc gaatttgact ctttttgact ttgatgaaaa agaagccaca aaagaatttg
     2341 taaatctaaa aaaagaatac gacaatatct tcaatctaga aagcaatcat ccttttgaat
     2401 ggcgttttga attccctgaa attttagacg atgatggaaa tttcaaaggc tttgatctca
     2461 tcatcggcaa tccgccttat ataagacaag aagagcttaa agaactcaag ccccatttag
     2521 ctaaaaatta taaggtttat aaaggcacga gcgatattta tacttatttt tatgaactag
     2581 gatttaatgt tttaaaagat aatggggtat tgagctatat cacttctaac aaatacacgc
     2641 gtgcaggata tggggaagct ttgcgtgaat ttttgcttaa aaatgttaag gttttagaat
     2701 acactgattt aaacggcata aaagtttttg atagtgctac agtggatact tctatacttt
     2761 gttttgaaaa atcaaaaagc aaagataata aattcaaata ccttgcccta agcaatgaaa
     2821 ttttaaaaac ttgtgcttat gatattggct tatataagga ctttgcagaa ttttcgcaaa
     2881 attctttaag caaagaaagc ttcactttta gcgatgagaa tactagtgcc ttaaaggcta
     2941 agacagaacg cataggaact ccgcttaaag aatggcaagg acttaatata tatcgtggaa
     3001 ttttaacagg ctataatgaa gcctttatca tcactactga aaaaagaaat gaaattttag
     3061 caaattgcaa agatgaagcc gaaaaagaac gcaccgctaa actcatacgc aaaatgctac
     3121 gcggacgcga tataaaaaga tatagttacg agtgggcggg actttgggtg ataaatactc
     3181 ataatggtta caaaaatcaa aatggagaaa aagtagaagc gataaatata aagcattatc
     3241 ctagtttaaa aaagcatttt gatgaatttt atccacaact agaaaaaaga gctgataaag
     3301 gcttgactcc ttataatctt agaaattgtg cgtatatcga agaatttgaa aaagaaaaga
     3361 tagtgtatcc gtgtataatg gcaaaagaac cttatttttc ttatgaaaca agtttcgcat
     3421 ttgcaatggc acctgctaat ataataactt caaattcaga tattttaaaa tacatacttg
     3481 catttttaaa ttctgatttt atatatttaa tgttaagaaa attctatatg ggtggtggaa
     3541 tagaaggaga gttaaaaaca aataatctag aaaaacttcc tataccaaaa ataaattcta
     3601 aaaatcaaaa attagccgat gagcttataa atttagtcga tgaaatttta aaggccaaag
     3661 aacaagacaa aaacgcaaat acccaagaac tagaaaacaa aatcaattct ttggtttata
     3721 aactttacaa tctcaccgaa gaagaaataa aaataattga aggaagatag tatgaaatat
     3781 aaatggatag ttaaaaatgc ttatattgac ttcaagctta ataatttata tatgctaatt
     3841 aacccttcag ataaaatcta tcttgaagaa gatgtgtgtt attatcttga aatttacata
     3901 aaatatagaa tttttaacaa ttgtatttta gtttgtgata tgttggataa ttggtggaaa
     3961 ttgatttctt caactcttca tttagataaa agtcatataa agtataacta tctttcaaat
     4021 acatttattg taagtgattt tgagcttgga attaaactag aatctaattt gttaacaaaa
     4081 tttaattttg aattttataa tggattgatt ctcaatcaat tatcaattac caatggacta
     4141 tcctttaaaa gagaa
//
LOCUS       DAPWGO010000107         4007 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.109, whole genome shotgun sequence.
ACCESSION   DAPWGO010000107 DAPWGO010000000
VERSION     DAPWGO010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4007
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.109"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            329..718
                     /locus_tag="RJ336_001596"
     CDS             329..718
                     /locus_tag="RJ336_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214028.1"
                     /translation="MMLFSEDMIENLCTNKIKLFSNIKDYTERKKLIEKEVLSINIPF
                     EAHCTNTLHYLIYDGLSQSESSLLELLYKHNPYPCALVGGGSSGNMDFSGTFIFYNGE
                     ILKNQALSIHVQFKSKYRFDLMKSQKF"
     gene            873..1025
                     /locus_tag="RJ336_001597"
     CDS             873..1025
                     /locus_tag="RJ336_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDZ5214029.1"
                     /translation="MQEYTFALKIGEDYLISPMEINPDKTLFSYCDIESAQELSLLKK
                     QILLKP"
     gene            1187..1999
                     /locus_tag="RJ336_001598"
     CDS             1187..1999
                     /locus_tag="RJ336_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDZ5214030.1"
                     /translation="MGIAKSLVAIFFYEVENFNDFKPRYLKTFIQKYSDFKYYYLNIR
                     AQKLEMTNEINKIILNQLKQNTSEIDKNTSIFKEIFEELENIRRSLTTISESFTNFTN
                     YLEYNLYQSEEKMNLEKEVQSSLKNIDQLNSILDLISGIAEQTSLLSLNAGIDAARAG
                     KLGRGFAVIADEVRKLSENTQMGLGEMEGAIKLVIQTIQSIAKSSNSSTQEMNFIRDK
                     SNEFSKIISNLINSGKEISDKLKQRSNVGEDFEKNVNQLKCYEDVLAKLNQY"
     gene            complement(2054..2407)
                     /gene="rplT"
                     /locus_tag="RJ336_001599"
     CDS             complement(2054..2407)
                     /gene="rplT"
                     /locus_tag="RJ336_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDZ5214031.1"
                     /translation="MARVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSLV
                     YAYRDRRRKKRDFRRLWIVRINAACRLNDLSYSRFINGLKKAGIELDRKILADLAMND
                     SAAFAKIAEAAKKAL"
     gene            complement(2501..2692)
                     /gene="rpmI"
                     /locus_tag="RJ336_001600"
     CDS             complement(2501..2692)
                     /gene="rpmI"
                     /locus_tag="RJ336_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDZ5214032.1"
                     /translation="MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRDLR
                     TAKYVHSTNVKAVEKMLGI"
     gene            2847..>4007
                     /locus_tag="RJ336_001601"
     CDS             2847..>4007
                     /locus_tag="RJ336_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214033.1"
                     /translation="MTINSANPYQNLTLSNPLQNSSALNLIKDSKALDQEGNENSLEQ
                     LSYIFNNTTYASEFGFRINEEGFFDKDLNKIANIPESYDINIKSVRSIAKELAKQDEN
                     LNYNKIDLPYLLNSYHSSLKSINSEFLQDDNAYLSRDLISKLSSGFSTDNGEFLGQIS
                     RIYNNQEEIDLALSNIANLNTLMLDNKITNFHFDKAIENTSSNEILKPYLTKNAEVSK
                     SGLLMNFIYHDIKTQNEKEFNFFMKPATLELSSHQNLQKILKGETDIEDYIKKENEKK
                     MSFDLYLYVNGVDKKTSTQDKLSVFFQQYINYQKDMDLREFANSSSIFQIYIDQNRND
                     FDALKKQYQNQSQDTQRLEEANQLRSSSIENFLDRRQKQANINKILNSYMSVM"
BASE COUNT         1582 a          567 c          532 g         1326 t
ORIGIN      
        1 taattttaac ggagtttaat caatgttttt taattttaaa aataaaagct cagcgcaaaa
       61 agaagagagt aaaaaagttt tagaagctct atttcttcaa gaaaatgaac ttgaagaaaa
      121 attaaaaaaa ataaatatca agccaaaatt aatcataggc tttgcgtcgt atcaacttaa
      181 cctagcaatc ataggaaata agattcaaaa ttctataaat gaacaatgtg atatcatctt
      241 aagcaatgct actgatttat tgtgcaatct tgattctaac tcaaacattg aaaacagtcc
      301 ttataaacaa aatatccaag gaataagctt gatgcttttt agcgaagata tgatagaaaa
      361 tctctgcaca aataaaatca agctttttag caatataaaa gattatacag aaagaaaaaa
      421 actgatagaa aaagaagttt tatctataaa tatacctttt gaagcacact gcacaaatac
      481 tttgcattat ttaatttatg atggtttaag tcaaagcgaa agttctcttt tagaactttt
      541 atacaaacac aacccctatc cttgtgcttt agtaggaggt ggatctagtg gaaatatgga
      601 ctttagcgga acatttatat tttataacgg agaaatatta aaaaatcaag ctttaagcat
      661 acatgtccaa tttaaatcta aatatcgttt tgatttaatg aaatctcaaa aattttaatc
      721 ctcaaagcaa cattaccttt accatacttg atgcaagctt atatgatagg acggtacgtg
      781 aatttattga taaaaaaacc tttcaatcca tcaacgcggt tgaagcttta tgcaattatt
      841 ttaactgtac ttttgaagaa cttaaaaata aaatgcaaga atatactttt gctttaaaaa
      901 ttggagaaga ctatcttatt tcccctatgg aaatcaaccc agataaaaca ttatttagtt
      961 attgtgatat agaaagcgct caagaattaa gcttgcttaa aaaacaaatt ttattgaagc
     1021 cataaaaaaa gattacgaaa aattttctct taataaacca aaaccactag gagcaatttt
     1081 taatgattgt atcttaagaa gacttcaaaa caaagaacat ttaaatcaaa tccattttaa
     1141 tgattttcct atagttggtt tttctagttt tggggaaatt tatggagtgg gaattgcaaa
     1201 aagtttagtg gcaatatttt tttatgaagt tgaaaatttt aatgatttca aacctagata
     1261 tttaaaaact ttcatacaaa aatacagcga ttttaaatac tattatctta atataagagc
     1321 tcaaaaacta gaaatgacaa atgagattaa taaaataatt ttaaatcaac tcaaacaaaa
     1381 tacatcagaa attgataaaa atacaagtat atttaaagaa atttttgaag aacttgaaaa
     1441 tataagaaga agtcttacaa ccattagtga aagttttacc aatttcacta actacctaga
     1501 atacaacctt taccaaagtg aagaaaaaat gaatttagaa aaagaagtgc aatcttcttt
     1561 gaaaaatata gatcaattaa atagtatttt agatcttatt tcagggattg ctgaacaaac
     1621 tagcctttta tctttaaatg caggtataga tgctgctaga gctggaaaac ttggtcgtgg
     1681 atttgcagtt atagctgatg aagttagaaa actttcagaa aatacccaaa tgggtctagg
     1741 tgaaatggaa ggagctatta aattagttat tcagaccata caatccattg caaaaagttc
     1801 caattctagt actcaagaaa tgaattttat aagggataaa tccaatgaat tttccaaaat
     1861 catttcaaat cttataaatt caggtaaaga aatttcagat aaattaaaac aaagaagcaa
     1921 tgtcggcgaa gattttgaaa aaaatgtaaa tcaactcaaa tgttatgaag atgttctagc
     1981 taaattaaat caatactaaa aaattaagaa tttcaagaaa tcaaaaatct tgaaattctt
     2041 acactaaaaa aaattaaagt gctttttttg cggcctctgc aatttttgca aaagcagcag
     2101 aatcattcat agctaaatct gctagaattt ttctatcaag ttcaatacct gcttttttaa
     2161 gaccattgat aaatcttgaa taacttaaat cattaagcct acaagcagca ttgatacgca
     2221 caatccaaag acgacggaag tctctttttt tgcggcgtct atcacgataa gcatagacta
     2281 gacttctttc taattgttct tttgcttttc taaaatgttt gcggcgtcca ctataaaaac
     2341 cacgcgctaa ttttaaaact tttttatgtc tgcggcgtct aacaacacct gtttttactc
     2401 ttgccatttt tatttccttt cataaagtgg cgtccaaatt tggagcttgc ccttgaaatt
     2461 ttatctcaga ggggagtttg aatgactttt agtcaaaaac ttaaattcct agcatttttt
     2521 caacagcttt tacatttgtg ctatgcacat atttagctgt gcgaagatca cgcattcttt
     2581 ttgcaggttt tttagtcaaa atatgacttc taaaagctga gcctcttttg attttatttt
     2641 tacctacttt gaagcgttta actgcgcttt taacgctttt catctttggc atacgctttc
     2701 cttatttaga taaattttta tttttcaaat taaaagaaaa gctaaatact atcaaatttt
     2761 ttctaatttt tgactgaatt taatttttaa aaaacttggc acaccttttg cttataaaaa
     2821 atagcaatat tttggaaaga tttaaaatga ctataaattc ggcaaatcca tatcaaaatt
     2881 taaccttatc taatcctttg cagaatagct ctgctctaaa tttgattaaa gatagcaaag
     2941 ctttggatca agaaggaaat gaaaatagct tagaacaatt aagttatatt tttaataata
     3001 ccacttatgc tagtgaattt ggatttagaa tcaatgaaga aggttttttt gataaagatt
     3061 taaataaaat tgcaaatata ccagaatctt atgatatcaa cattaaaagt gttagaagca
     3121 tagcaaaaga actcgcaaaa caagatgaaa atttaaacta caataaaatt gatctacctt
     3181 atcttttaaa tagctatcat agttcattaa aatctataaa ttcagaattt ttacaagatg
     3241 ataatgctta tttaagtcgt gatcttattt caaaactatc atcaggtttt tcaacagata
     3301 atggagaatt tttaggccaa atttcaagaa tttacaacaa tcaagaagaa attgatttgg
     3361 cattaagcaa tatcgcaaat ttaaatactt taatgttgga taataaaata actaattttc
     3421 attttgataa agccatagaa aatacttctt ctaatgaaat tttaaaacct tatttaacta
     3481 aaaatgcaga agtatcaaaa tctggtcttt taatgaattt tatctaccat gatataaaaa
     3541 ctcaaaacga aaaagaattt aactttttta tgaaacctgc cactttagaa ctaagctctc
     3601 atcaaaattt acaaaaaatt ctcaagggtg aaacagatat agaagattac atcaaaaaag
     3661 aaaatgaaaa aaagatgagt tttgatcttt atctttatgt taatggcgta gataaaaaaa
     3721 caagcactca agacaaacta tctgtatttt ttcaacaata tattaactac caaaaagata
     3781 tggatttaag agaatttgca aattcaagtt caatatttca aatttatatc gatcaaaatc
     3841 gcaatgattt tgatgctctt aaaaaacaat atcaaaacca aagtcaagat acgcaaagat
     3901 tagaagaagc aaatcaacta cgttctagct ctatagaaaa ttttttagat cgtcgtcaaa
     3961 aacaagcaaa tataaataaa attttaaact cttatatgtc tgtgatg
//
LOCUS       DAPWGO010000108         3982 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.110, whole genome shotgun sequence.
ACCESSION   DAPWGO010000108 DAPWGO010000000
VERSION     DAPWGO010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3982)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3982)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3982
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.110"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..637)
                     /locus_tag="RJ336_001602"
     CDS             complement(<1..637)
                     /locus_tag="RJ336_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(A) polymerase"
                     /protein_id="HDZ5214034.1"
                     /translation="MDLKSLENNRLYILKRLGILKFLSIIEALLIGFLAFVFIRDALI
                     AVILAVFVGVFFFRFTAKKLKLAQKELQIDALNLFLRRFGAKFKKQSLSQKDFLKLGL
                     TKDLKEFKSQNCFEFKDFKIYDIQFLDENKRFFCGILLEILNANKNPSFENEEQIYIK
                     LTDKNFTLNHIFSKENRYLIATLSNPFFIDVKKDLESNFKDLEENLNSIKNK"
     gene            complement(637..2445)
                     /gene="typA"
                     /locus_tag="RJ336_001603"
     CDS             complement(637..2445)
                     /gene="typA"
                     /locus_tag="RJ336_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDZ5214035.1"
                     /translation="MENIRNIAVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDS
                     NDIEKERGITILSKNTAINYKGTKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQE
                     GVMPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALDANDEQLDFA
                     IVYAAAKNGYAKLDLNDESDNMEPLFKTILERVPAPSGTNDNPLQLQVFTLGYDNFVG
                     KIGIARIFNGVVKKNQSVMLAKADGTKVNGRISKLIGFMGLEKMDIEEAGSGDIVAIA
                     GFEALDVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGTEGKHVTSNKIAERL
                     EAEMKTNIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDG
                     VKTEPFEHLVIDVPEEFSGAVIEKLGKRKAEMKTMAPTGDGQTRLEFEIPARGLIGFR
                     SQFLTDTKGEGVMNHSFLEFRPFSGAVEKRNNGALISMENGVALGYSLFNLQERGVLF
                     IEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKLSLERAL
                     EWIEEDELVEVTPVNVRVRKRYLDPTQRKRMEKAKS"
     gene            2580..2903
                     /locus_tag="RJ336_001604"
     CDS             2580..2903
                     /locus_tag="RJ336_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214036.1"
                     /translation="MSKPLNEEIFIEFKSDLAERKNEVLLQVLELLETFRSDKNEKMA
                     RISSELTEILENEENLEKILNAKNLEELLNILIALNEDKMIKVYEDSYLKEKFPNVMV
                     DKFLK"
     gene            2921..>3982
                     /locus_tag="RJ336_001605"
     CDS             2921..>3982
                     /locus_tag="RJ336_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDZ5214037.1"
                     /translation="MMSNLAPQNDVLNLTPSKTSNTSSSFSKTSKNKEHESSDSKNST
                     QDDTESFLNSLLNSIDETNEFLPDHMKISQKEVVSEAMNRLQKGAFDESDKISIFESA
                     SFMQILSLLDKLKTDTADVKLANLSTQLSSLIKTEANFNALKGASNLSELLDIAKDLG
                     LNVKNIKVDRLLDLKATFPNLDKADFFKGAVDNVFKEIINNKISNVSKNLNHNLENTT
                     HTTSTHSTQKTNSKDSGSLLSQTLKNLDSILSSKESKHEKNDKVKSKIEEDTTDTKNT
                     LKNIKNDEFAKNLTEELNIKDKKNQDSLNKDNNLKDLNKESKDLNKDFNKELNKNQEK
                     NNLNQENIQDQNKNLKNNDQ"
BASE COUNT         1403 a          650 c          570 g         1359 t
ORIGIN      
        1 gtttgttttt tatagaattt agattttctt ctaaatcttt gaaattgctt tctaaatctt
       61 tttttacatc tataaaaaaa ggattgctta aagtagcgat aagataacga ttttctttag
      121 aaaagatatg atttaaagtg aaatttttat ctgtaagttt gatataaatt tgttcttcgt
      181 tttcaaagct aggatttttg tttgcattta aaatttcgag taaaattcca caaaaaaagc
      241 gtttgttttc gtccaaaaac tgaatatcat aaattttaaa atccttaaat tcaaagcagt
      301 tttgactttt aaattctttc aaatcctttg taagtcctag ttttaaaaag tctttttgac
      361 ttaaactttg ctttttaaat ttcgccccaa aacgacgcaa aaataaattt aaagcatcaa
      421 tttgcaattc tttttgtgcg agttttagtt ttttagctgt aaaacgaaag aaaaaaacac
      481 ctacaaaaac agctaaaatt actgcgatta aggcatctct tataaaaaca aaggctaaaa
      541 agcctataag taaggcttcg ataatgctta ggaattttaa gattcctaag cgtttaagta
      601 tataaagtct attattttct aagcttttta aatccattaa gattttgctt tttccattct
      661 ttttctttga gttgggtcaa gatagcgttt gcgaacacgc acatttacag gtgtaacttc
      721 tacaagttca tcttcttcta tccactctaa agctctttca agacttaatt ttctaggtgg
      781 cacaagcttg attgcatcat cgcttccgct tgctcttaca ttggtaagat tctttccttt
      841 gataggatta acatctaaat catttggacg agagtgctca cctataatca taccagtata
      901 aactttagtt tgaggctcta tgaaaagcac tccacgctct tgaaggttaa acaaagaata
      961 ccccaaagcc acgccatttt ccatagaaat taaagctcca ttgttacgct tttcaaccgc
     1021 gccgctaaaa ggacggaatt ctaaaaagct atgattcatc acgccttcgc ctttagtatc
     1081 ggttaaaaat tggcttctaa aacctataag tccgcgtgct ggaatttcaa actcaagtct
     1141 tgtttgtcca tctcctgttg gtgccatggt tttcatttca gcttttcttt tgccaagttt
     1201 ttctattact gcaccgctaa attcttcagg cacatcgata actaaatgtt caaaaggttc
     1261 tgttttaact ccatcttcaa cttttacgat aacttcaggt cttcccatgc aaaactcaaa
     1321 accttcacga cgcatatttt cagctaaaat agtgatttga agttcgcccc taccgcttac
     1381 tttaaattta ccttcgcctg tgctttcgta tttcatagca atattagttt tcatttcagc
     1441 ttctaaacgt tcagcgattt tatttgaagt tacatgtttt ccttcagttc ctgctaatgg
     1501 tccatcattt acagaaaata ctatgcttaa agtcggctct tcaatgtgta aaggatcaag
     1561 tggcatagga ttgtttggat ctacaacgct atcgccaaca tctaaagctt caaaacctgc
     1621 tatagctaca atatctccac ttcctgcttc ttcaatatcc attttttcta agcccataaa
     1681 accaatgagt tttgaaattc taccatttac tttggtgcca tcagcttttg caagcattac
     1741 gctttgattt ttcttaacaa ccccattgaa aattctagca atgcctattt tacctacgaa
     1801 attatcatac cctaaagtga aaacttgaag ttgtaaagga ttgtcatttg taccacttgg
     1861 cgctggaacg cgttcaagta tggttttaaa aagtggttcc atattatcac tttcatcgtt
     1921 tagatcaagc ttagcataac cattttttgc tgcagcataa actatagcaa agtcaagttg
     1981 ctcatcgttt gcatctaggg ctacaaaaag atcaaaaatt tcattgatca ctctttcagg
     2041 atcagcagct ggtttgtcga ttttgttgat tacaactata ggtttaagcc ctaaagataa
     2101 agctttttta accacgaatt tagtttgcgg cataacgcct tcttgagcat ccactaaaag
     2161 caaaactcca tcaatcattt ttaaaacgcg ttctacttct ccgccaaaat cagcatgccc
     2221 tggagtatct atgatgttga tttttgtacc tttgtaattg atcgctgtgt tttttgaaag
     2281 tatggtaata ccgcgttctt tttctatatc gttgctatcc ataacgcgtt ctgaaatttg
     2341 ttctctttcg ctaaaggtgc ctgattgttt taacaattca tctaccatag tggttttacc
     2401 atggtcaacg tgagctataa ctgctatatt tctaatgttt tccaaatttt cttctccaaa
     2461 gctaaatttt taaaagctta gattatacaa aaatttaact taaactacaa agcatcaaaa
     2521 cttggaacac ttcttgcttt aaagacttgt gaaattaaaa ttttaaaaag gaagttaaaa
     2581 tgtcaaaacc attaaatgaa gagattttta ttgaatttaa aagcgattta gctgagagaa
     2641 aaaatgaagt tttacttcaa gttttagaac ttttagaaac ttttagatca gataaaaatg
     2701 aaaaaatggc aagaatttca agtgagctta cagaaatttt agaaaatgaa gaaaatttag
     2761 aaaaaatttt aaatgctaaa aatttagaag agcttttaaa tattttaatt gctttaaatg
     2821 aagataagat gattaaagta tatgaagatt cttatttgaa agaaaaattt cctaatgtaa
     2881 tggtagataa atttttaaaa taattttttt tgaaggaaaa gtgatgtcaa atttagctcc
     2941 gcaaaatgat gttttaaatc ttacgccgag taaaacttct aatactagta gttcctttag
     3001 taaaacgagt aaaaataaag aacatgaaag tagcgatagt aaaaattcaa ctcaagatga
     3061 tacggaaagt tttttaaatt ctttgcttaa ttctattgat gaaaccaatg aatttttacc
     3121 tgatcatatg aagatcagtc aaaaagaagt tgttagtgaa gcgatgaaca gacttcaaaa
     3181 aggagctttt gatgagagtg ataagataag cattttcgaa tctgcttctt ttatgcaaat
     3241 tctttctttg ttggataagc taaaaacaga tacagcagat gttaaactag caaatctttc
     3301 tactcaactt tcaagtctta ttaaaacaga ggctaatttt aatgctttaa aaggtgcatc
     3361 aaatcttagt gagcttttgg acatagctaa agatctgggc ttaaatgtaa aaaatattaa
     3421 agtagatcgt cttcttgatc ttaaagcaac ttttccaaat ttagataagg ctgatttttt
     3481 taagggtgct gtggataatg tttttaaaga aatcatcaat aataaaattt ccaatgtgag
     3541 taaaaattta aatcacaatt tagaaaatac aactcatact acaagcactc attctacgca
     3601 aaaaacaaat tctaaagata gcggttcttt gctttctcaa actttaaaaa atttagattc
     3661 catactttca tccaaagaaa gcaaacacga aaaaaacgat aaagttaaat caaaaataga
     3721 agaagatacc acagatacta aaaatacttt aaaaaatatc aaaaatgatg agtttgcaaa
     3781 aaatttaaca gaagagttaa atataaaaga taaaaaaaac caagatagtt taaataaaga
     3841 taacaatctt aaagatttaa ataaagaaag caaagactta aacaaagatt ttaataaaga
     3901 gttaaataaa aatcaagaaa aaaacaattt aaatcaagaa aatatacaag atcaaaataa
     3961 aaatttaaag aacaatgatc aa
//
LOCUS       DAPWGO010000109         3877 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.111, whole genome shotgun sequence.
ACCESSION   DAPWGO010000109 DAPWGO010000000
VERSION     DAPWGO010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3877
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.111"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(30..1052)
                     /gene="selD"
                     /locus_tag="RJ336_001606"
     CDS             complement(30..1052)
                     /gene="selD"
                     /locus_tag="RJ336_001606"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(1002..1004),aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDZ5214038.1"
                     /translation="MQYKNQNLTHFVKAAGUAAKLSPGGLKTILNFMQKTPALLSDIG
                     NNEDASVYQISPDLALVQTLDFITPIVDSAYHFGAIAAANALSDVFAMGAEVINALNI
                     VGFDTCNHDINILKELLEGANDKVQECNALVVGGHTIESTELFFGLSVTGKVHPSKFI
                     ANNTAKVGDCIILTKPLGTGILSTALKAQMLNQKHLDIMLKSMMELNYKASQIALKFH
                     PSAMSDVTGFGLLGHLKEMLNKNISFEIFESELPFLDGVKEYFNMGLIPAGAYKNLEF
                     IKELIPDLNEEKLLLCDPQTSGGLLISISEKESLECLKKLEDENIQAKIIAKVVNKQE
                     NDIIIS"
     gene            complement(1062..1634)
                     /gene="yedF"
                     /locus_tag="RJ336_001607"
     CDS             complement(1062..1634)
                     /gene="yedF"
                     /locus_tag="RJ336_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDZ5214039.1"
                     /translation="MKIDCRNLSCPQPIVETKNALEKLQENEILEIVLNSIISKNNVV
                     KFLSSLSLNPVVDENAQEFCIKVQKKNFNSSEVNIHDYNVLFLKTDKVGEGELGQNLL
                     VGFLSTLKNLDHAPSKILCVNESVLINVDENHKAHLAMKELENLGIEIISCGACLEFF
                     NKSKELKIGNIGNAYEILNELFGKAKIITL"
     gene            complement(1746..3848)
                     /gene="ccaA"
                     /locus_tag="RJ336_001608"
     CDS             complement(1746..3848)
                     /gene="ccaA"
                     /locus_tag="RJ336_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate chemotaxis receptor CcaA"
                     /protein_id="HDZ5214040.1"
                     /translation="MFKSLNIGLKLIFSVATVVVIGLVILISLITKQVSQNITKNTED
                     ILASITKEYATQTQGIFGEMIALNKSISGTLTEMFRSTSKEDLDIDNITNIITNTFDN
                     SAYSNFTYLYLIDPPEYFKEESKFFNTQSGKFVMLYADEEKDNKGGIKAIQASDEIAN
                     LQVVQDILKKAKYGENKVYIGRPIKMNLEGQDFDAVNVAMPIFDRKNQVVGVIGMTLD
                     FSAIATYLLDPKSQKYNGELRILLNSDGLVAIHPNKNLVLKNLKDVNPNKGAQETYKA
                     MSEGKNGVFNYIAFDGDDSYAAINSFKVQDSSWTVLVTAPKYSVFEPLKKLQLIIIGA
                     SFIFIFVVLGVVYYCVRKIVASRLPVILSSLESFFRFLNHEKIEPKAIEIRANDELGA
                     MGRIINENIEKIQISLEQDQNAVDESVQTAREIEKGNLTARITKNPINPQLVELKNVL
                     NRMLDVLQSKIGSNMNEINRVFDSYKALDFSTEVLDAKGEVEITTNILGKEIKKMLVA
                     SSNFAKDLANQSEELKNSMQKLADGSNAQASSLEQSAAAVEEINSSMQNVSGKTVEVA
                     SQADDIKNIVNVIKDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRQLAERTGKS
                     LSEIEANINILVQSVNEVAESVKEQTAGITQINDAIAQLETVTKENVEVANVTNNITN
                     EVNQIAAAILEDVDKKRF"
BASE COUNT         1294 a          676 c          470 g         1437 t
ORIGIN      
        1 aattttaatg ggtatataag taacaaaaat taagaaatga taatatcatt ttcttgctta
       61 tttacaacct tagcaataat tttagcttga atattttcat cttctagttt ttttaaacat
      121 tctaaggatt ctttttcact tatagaaatt aaaagtcctc ctgaagtttg cggatcacaa
      181 agtaataatt tttcttcatt taaatcaggg ataagttctt ttataaattc taaattttta
      241 taagctccag caggaattaa acccatatta aaatactctt ttactccatc taaaaaagga
      301 agttcacttt caaaaatttc aaaagaaata tttttattta gcatttcttt taaatgtcct
      361 aaaagtccaa aacctgtgac atcactcatg gcacttggat gaaatttaag agcaatttga
      421 ctggctttat aatttaactc catcatactt ttaagcatta tatctaaatg tttttgattt
      481 aacatttgtg cctttaaagc cgtacttaaa attcctgttc ctaaaggctt ggttaaaata
      541 atacaatctc caactttagc cgtattatta gcaataaatt tactaggatg tacttttcct
      601 gtaacactaa gtccaaaaaa aagctcagtg ctttctatag tatggccacc cacaactaaa
      661 gcattgcatt cttgaacctt atcatttgca ccttctaaaa gctcttttaa gatatttata
      721 tcatgattac aagtatcaaa acctactata tttaaggcat taattacctc tgcacccata
      781 gcaaaaacat cgcttaaagc atttgctgca gcaatagcac caaaatgata agcactatct
      841 actataggag tgataaaatc aagcgtttgc accaaagcta aatcaggact gatttgatat
      901 acgcttgcat cttcattatt tccgatatca ctaagtaaag caggagtttt ttgcatgaaa
      961 tttaaaattg ttttaagacc acccgggctt aatttcgctg ctcaacctgc tgctttaaca
     1021 aaatgggtta aattttgatt tttatattgc agtgtttttc cttatagagt aatgattttt
     1081 gctttaccaa aaagctcgtt taaaatttca taagcattgc ctatatttcc tattttaagt
     1141 tctttgcttt tattgaaaaa ttccaaacaa gctccgcaac ttatgatctc aatacctaaa
     1201 ttttcaagtt ctttcatagc taaatgtgct ttatgatttt catcaacatt gattaaaaca
     1261 ctttcattta cgcaaagaat tttacttgga gcatgatcta aattttttaa ggtacttaaa
     1321 aatcctacaa gtaaattttg tcccaattca ccctcaccca ctttgtcggt ttttaaaaat
     1381 aaaacattat aatcgtgaat atttacttca ctagaattaa aattcttttt ttgtactttg
     1441 atgcaaaact cttgtgcatt ttcatctaca acagggttta aacttaaaga gctaagaaat
     1501 tttacaacat tattttttga aataatagaa tttaaaacaa tttctaaaat ttcattttct
     1561 tgaagttttt caagagcgtt ttttgtttca actataggct gaggacaaga aagattgcga
     1621 caatcaattt tcattatttt tccttgatat tagctttgaa aaataatatt attttattac
     1681 ttgttttgtg tttaaaaatt ttaaataata tagaaaaaat ttaaaagctc aaaaatgagc
     1741 tttttttaaa atcttttttt atccacatct tcaagaattg ccgcagcaat ttgattgact
     1801 tcatttgtta tattattggt aacatttgca acttcgacat tttccttagt tacagtttca
     1861 agttgtgcta tagcatcgtt aatctgtgtg attcctgctg tttgttcttt tacagattct
     1921 gctacttcat ttacgctttg aacaagtata ttaatatttg cctcgatttc agataaggat
     1981 tttcctgttc tttccgcaag ctgtcttacc tcatctgcaa caactgcaaa accacgccca
     2041 tgttctccag cacgtgcagc ttcaatagct gcatttaaag caagaagatt cgtttgctca
     2101 gcgatatctt taatcacatt gacaatattt tttatatcat cagcttgcga agcaacctca
     2161 actgtttttc cacttacatt ttgcatagaa gaattaatct cctctacagc tgcagccgat
     2221 tgttctaaag aactcgcttg tgcattagag ccatcagcaa gtttttgcat agaatttttt
     2281 aactcttctg actgattggc taaatcttta gcaaaatttg aagaagctac aagcatcttt
     2341 ttaatttctt tacctaaaat attagttgta atctcaactt cgcctttagc atcaagtacc
     2401 tctgtgctaa aatcaagcgc tttataacta tcaaaaactc tattaatttc attcatatta
     2461 gaaccaattt tactttgcaa aacatcaagc attctattaa gaacattttt aagttctact
     2521 aattgagggt ttataggatt tttagtaatt cttgcagtta aattaccttt ttcgatttct
     2581 ctagcagttt gcaccgattc atctacagca ttttgatctt gttctaaaga tatttgaatc
     2641 ttttcaatat tttcatttat gattctgccc attgctccta gctcatcatt ggcacgaatt
     2701 tcaatagcct taggttcaat tttttcatgg tttaaaaaac ggaaaaatga ttctaaagaa
     2761 ctaagaatca caggcaatct agatgcgaca atttttctta cgcaataata aaccactcct
     2821 aaaacaacaa aaataaaaat aaaagatgca ccaataataa ttaattgtaa ttttttcaaa
     2881 ggttcaaaaa ctgaatattt aggggcagtt accaaaaccg tccaagaact atcttgcact
     2941 ttaaaactat taatcgcagc ataagaatca tcaccgtcaa aagctatata gttaaaaact
     3001 ccattttttc cttcactcat agccttataa gtctcttgtg cacctttatt aggattgaca
     3061 tcttttaaat tttttaaaac caaattttta ttaggatgaa ttgcaacaag accatctgaa
     3121 ttcaaaagaa ttcttaattc tccattatat ttttgactct tagggtctaa aagataagta
     3181 gcaatagccg aaaaatccaa agtcataccg ataacaccta caacttgatt ttttcgatca
     3241 aaaataggca tagcaacatt tacagcatca aaatcttgac cttctaaatt catcttgata
     3301 ggacggccta tatatacttt attttcccca tattttgctt tttttaatat atcttgcaca
     3361 acttgcagat tagctatttc atcactagct tgtattgctt ttattccgcc tttattatcc
     3421 ttttcttcat cagcgtaaag catgacaaat tttccacttt gagtattgaa aaatttactc
     3481 tcttctttaa agtattctgg cggatcgata agatacaaat aagtaaaatt agaataagca
     3541 ctattatcaa aagtattggt tataatattt gttatattat ctatatctaa atcttcttta
     3601 gaggttgatc taaacatttc tgttaaagta cctgaaatac ttttatttaa agcgatcatt
     3661 tccccaaaaa ttccttgagt ttgggtagca tattctttcg tgatagaagc aagaatatct
     3721 tctgtatttt tagtaatatt ttgacttact tgttttgtga ttaatgaaat taaaataaca
     3781 agtccaataa caacaacagt tgccacagaa aaaataagtt ttaaacctat atttaaagat
     3841 ttaaacatct tataactcct aaaaaataaa aaattca
//
LOCUS       DAPWGO010000110         3851 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.112, whole genome shotgun sequence.
ACCESSION   DAPWGO010000110 DAPWGO010000000
VERSION     DAPWGO010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3851
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.112"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..881
                     /locus_tag="RJ336_001609"
     CDS             <1..881
                     /locus_tag="RJ336_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDZ5214041.1"
                     /translation="KIKDMEIFLDLLNTQSPTHTANNFSITQPNVSIVIKNLENKFDG
                     ILFERLGKKLLPTPKALELGKNWLKIIQAYYQSLEKLNDESMLLGEIKIASTQSISEH
                     FLAPILFDFKAEFKNIEIHSQTQNSKECLNLLKNGNIEFAIIEAELDPALVEYENLEI
                     NFWQDDELIVATSDKKLNEKEFYIDELLEQKWILREVGSGLRDKFLNEIGASSKKLNI
                     FLELDRMAAIKELVLQKKAISIFSKKSIEKELKNSTLYEIKLKNINLKRKFYTLKRKN
                     YNFNRALEKFEKIFKS"
     gene            961..2829
                     /gene="rpoD"
                     /locus_tag="RJ336_001610"
     CDS             961..2829
                     /gene="rpoD"
                     /locus_tag="RJ336_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDZ5214042.1"
                     /translation="MNAKTQEAELEELFQENAKDYITYEKLVKYLTKQPSASTAKKVQ
                     ALMKKHKVQLFSAAEIAQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRS
                     DSPVRMYLREMGQIALLNKDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLI
                     NRERRVKELFKSFDDEEKSDDKLDELDIDEDEENETELESDEENAKKNSKKEDERTLK
                     VIEKFKALEKAKKDWLKTSKDKESEDELLDKLSIAFKKNILKEKLMDLGPTSKLISEI
                     VKSMETALKSDEEFDKELKRLEYRLPMFSDELKKRHADILKDITKLSKEEITERALET
                     TMVSTYMEIKKLFQTKEASEKSFDLEKSRLKEILEQIKRGKKISDEAKGRMAKSNLRL
                     VVSIAKRYTNRGLPFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAISRAIA
                     DQARTIRIPIHMIETINQINKIIREHLQKDGKEPDVSVIAKEVGLSVDKVKQVIKITK
                     EPISLEAPIGNEDDGKFGDFVEDRNSLSPMDHILKDDLKEQIDEVLDQLNDREKAVIR
                     MRFGLMDDESDRTLEEIGKELNVTRERVRQIESSAIKKLKHPKVGRKLKNYIEGWK"
     gene            complement(2844..3356)
                     /locus_tag="RJ336_001611"
     CDS             complement(2844..3356)
                     /locus_tag="RJ336_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDZ5214043.1"
                     /translation="MKKIYIIRHAKASKSGDIDDFERKLTKSGKEDLKKLFKNLALHE
                     IHPDLVLSSPAVRTAKTAKKIAKFYNFDKNKICFDERLYLCNVENLLKILQDIDDEFN
                     EVFLVGHNPGLMELGELLSSLCLASFPTSSILCLEFDIKEFKNLKKHSGKLVFFEHVR
                     KLKEEKDLGF"
     gene            complement(3353..3826)
                     /locus_tag="RJ336_001612"
     CDS             complement(3353..3826)
                     /locus_tag="RJ336_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDZ5214044.1"
                     /translation="MISYDYYNILGLNILFFNGAYWQLLSLMFLHGNLTHLILNMIVL
                     FQFGRILETYLGALRFIFIYFIGGLLCSLLSVFYVYFDFKYFGENINVIGASGAICVL
                     MGFYAVLDKNSTKGLIVAILLMSFAPLLMGVNVAWYGHIFGFMCGYILAKIKEVK"
BASE COUNT         1663 a          550 c          549 g         1089 t
ORIGIN      
        1 tgaaaatcaa agatatggaa atatttttag atcttttaaa cactcaaagt ccaactcata
       61 cagccaacaa tttttccata actcaaccta atgtttcaat agtaattaaa aatttagaaa
      121 ataaatttga tggtatttta tttgaaagac ttggaaaaaa actcttacct acaccaaaag
      181 ctttagaact aggaaaaaat tggttaaaaa ttatacaagc ctactaccaa agcttagaaa
      241 aattaaacga cgaaagtatg ctcttagggg aaataaaaat agcctcaact caaagcattt
      301 ctgaacattt tttagctcct attttatttg attttaaagc agaatttaaa aacatagaaa
      361 ttcactctca aacgcagaat tcaaaagaat gtttaaattt gctaaaaaac ggaaatatag
      421 aatttgcaat cattgaagca gaacttgatc cggctttagt ggagtatgaa aatttagaaa
      481 taaatttttg gcaagatgat gaacttatag tagctacaag tgataaaaaa ctcaatgaaa
      541 aagaatttta tatcgatgaa cttttagaac aaaagtggat tttaagagaa gtaggctcag
      601 gcttaaggga taaattttta aacgaaattg gtgcaagctc aaaaaaactt aatatttttc
      661 ttgagcttga tagaatggcc gcgattaaag aacttgtttt acaaaaaaaa gcaatctcta
      721 ttttttccaa aaaaagcata gaaaaagaat taaaaaattc aacactttat gaaattaaat
      781 taaaaaatat caacctaaag cgtaaatttt acaccttaaa aagaaaaaat tataatttta
      841 acagagcttt agaaaaattt gaaaaaatat tcaaatcata agcataataa ccgatttata
      901 tagaaagtta agcaattttt agataaaatc caaagcttat ataaatttca aggataatca
      961 atgaacgcca aaactcaaga agctgaatta gaagaattat ttcaagaaaa tgcaaaagat
     1021 tatatcacat atgaaaaatt ggtaaaatat cttacaaaac aaccaagtgc atcaaccgct
     1081 aaaaaagtgc aagcattaat gaaaaaacac aaagtgcaac ttttttcagc agccgaaatt
     1141 gcacaaatga aaaacataga agatgcaaaa agacttcaag aagaaaaaca aaaactccaa
     1201 gatacaagcc ttgagaacga atttgattta gccaatgaaa acgatttatt agaatggagc
     1261 agatcagact ctcctgttcg tatgtattta agagaaatgg gacaaattgc tttattaaat
     1321 aaagatgaag aaattgaaat ttccaaaaaa atagaacttg gcgaagatat tatcattgat
     1381 gctttttgtt ctgtacctta tttgatagat tttattttag attataaaga acctttaata
     1441 aacagagaaa gaagggtaaa agaactattt aaaagctttg acgatgaaga aaaaagtgat
     1501 gataaacttg atgaacttga tatagatgaa gatgaagaaa acgaaacaga attagaatca
     1561 gatgaagaaa atgctaaaaa aaacagcaaa aaagaagatg aaagaacttt aaaagttata
     1621 gaaaaattta aagctctaga aaaagctaaa aaagattggc taaaaacatc caaagacaaa
     1681 gaaagtgaag acgagctttt agataaatta agtattgcgt tcaaaaaaaa tattttaaaa
     1741 gaaaaattaa tggatctagg ccctacttca aaacttatta gtgaaattgt aaaatcaatg
     1801 gaaactgcac taaaaagcga tgaagaattt gacaaagaac ttaagcgttt agaataccgc
     1861 ttacctatgt tttctgatga acttaaaaaa cgccatgcag atattttaaa agatattaca
     1921 aaattgagca aagaagaaat cacagagcga gctttagaaa caaccatggt aagcacttat
     1981 atggaaatta aaaaactatt tcaaactaaa gaagctagtg aaaaaagctt tgatcttgaa
     2041 aaatcacgtt taaaagaaat tttagagcaa attaaacgcg gtaaaaaaat ctctgatgaa
     2101 gcaaaaggaa gaatggcaaa atcgaacttg cgtcttgttg taagcatagc taaacgctac
     2161 acaaatcgtg gtctaccttt cttagatctt attcaagaag gaaatatagg tttaatgaaa
     2221 gctgtggata agtttgaata caaaaggggt tataaatttt ccacttatgc aacttggtgg
     2281 atcaggcaag ctatttcaag ggctatagct gaccaagcaa gaaccataag aattccaatc
     2341 cacatgatag aaaccatcaa tcaaattaac aaaattatcc gcgaacatct acaaaaagat
     2401 ggaaaagaac ctgatgtcag tgttatagcc aaagaagtag gtttaagcgt agataaggtt
     2461 aaacaagtta ttaaaatcac aaaagaacca atttctcttg aagctccaat aggaaatgaa
     2521 gatgatggta aatttggaga ttttgttgaa gatagaaatt cactttctcc aatggatcat
     2581 atcttaaagg atgatttaaa agaacaaatt gatgaagttt tagatcaatt aaacgataga
     2641 gaaaaagcgg taattcgtat gcgttttggt ttaatggatg atgaaagtga tagaacttta
     2701 gaggaaattg gaaaagagct taatgtcact cgagaaagag tgagacaaat agaaagttca
     2761 gctataaaaa aactcaaaca ccctaaagta ggaagaaaac taaaaaatta tattgaaggt
     2821 tggaagtaag agtcaatctc ttgctaaaaa cccaaatctt tttcttcttt taacttgcgc
     2881 acatgttcaa aaaaaactaa ttttccgcta tgttttttta aatttttaaa ttccttaata
     2941 tcaaattcta aacacaagat agaagaagtt ggaaaagaag ctaaacatag cgagcttaat
     3001 aactctccaa gctccattaa accaggatta tgacccacta aaaatacttc gttaaactca
     3061 tcatcaatat cttgcagaat ttttagcaaa ttttcaacat tacaaagata caatctttca
     3121 tcaaaacaaa ttttattttt atcaaaatta taaaatttgg ctattttttt cgctgtttta
     3181 gcggttctaa cagcaggact tgatagcacc aaatcaggat gaatttcatg taaggcaaga
     3241 tttttaaaaa gtttttttaa atcttccttt ccactcttag taagttttct ttcaaaatca
     3301 tcaatatccc cactcttact tgcttttgca tgtcttataa tataaatttt tttcatttta
     3361 cctcttttat tttagctaaa atataaccac acataaaccc gaaaatatga ccataccaag
     3421 caacatttac ccccataagc aatggcgcaa aactcataag taaaattgcc actataagtc
     3481 cttttgtgct atttttatca agaacagcat aaaagcccat taaaacacaa attgcaccac
     3541 tagcgcctat gacatttata ttttctccga aatatttaaa atcaaaatac acataaaaaa
     3601 cacttaaaag tgaacacaac aatccgccaa taaaataaat aaaaataaaa cgcaaagcac
     3661 ctaaataagt ttctaatata cgcccaaatt gaaacaaaac tatcatattt aatataagat
     3721 gagttaaatt tccatgtaaa aacattaaac ttaaaagttg ccaataagct ccattaaaaa
     3781 ataaaatatt caaaccaagg atattataat aatcataaga aatcaaaaaa taacataaaa
     3841 tatttaaaaa a
//
LOCUS       DAPWGO010000111         3736 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.113, whole genome shotgun sequence.
ACCESSION   DAPWGO010000111 DAPWGO010000000
VERSION     DAPWGO010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3736)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3736)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3736
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.113"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..358
                     /locus_tag="RJ336_001613"
     CDS             <1..358
                     /locus_tag="RJ336_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214045.1"
                     /translation="TKADFSTPLTCDLNVKDCTYSFNNKEVLISLNPKPLQSLDVTNL
                     KIVNLGNYNNLGIKIYGLNMYMGEIKPKIHRLNSTDYESKIVLAACVLDTMRFRVEFM
                     DNNKPIGFYFDFELKK"
     gene            355..915
                     /locus_tag="RJ336_001614"
     CDS             355..915
                     /locus_tag="RJ336_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HDZ5214046.1"
                     /translation="MKKNIILFIVIVAIILGVIFFIKNHQNSYDFILKSDLKEETTLK
                     DFKGDKLIIYFGYTYCPDVCPATLSLAGKALKQINNPKAHLLFISLDPNRDNNLSNTN
                     EWLRYFYPKADALIAKDEKTLQKITKQYNVQYQKIDLNDSFMGYSITHSNMLYLIDEK
                     GHFYKEISDLNPQEILRELRIFLNSQ"
     gene            complement(922..1821)
                     /gene="cysM"
                     /locus_tag="RJ336_001615"
     CDS             complement(922..1821)
                     /gene="cysM"
                     /locus_tag="RJ336_001615"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HDZ5214047.1"
                     /translation="MKVHEKVSELIGNTPIIHLKKFGINVFAKCEFLNPSHSIKDRAA
                     FEMIKDALDSKKINQDTTIVEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMI
                     TLFGARLELTPVNLGMKGAVDKANEILLNTPNSFMVSQFENISNKNAHRKNTALEILR
                     DLDNELDIFVAGFGTGGTISGVGEILKEKLEKVHIVGVEPLNSPLLSKGEAGSHKIQG
                     IGANFIPAILNKEIIDEVITVSNEDAINTAKELAKSGLMVGISSGANVFAASMLAKKF
                     PDKRILTMLNDTAERYLSTDLFA"
     gene            complement(1948..2244)
                     /locus_tag="RJ336_001616"
     CDS             complement(1948..2244)
                     /locus_tag="RJ336_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDZ5214048.1"
                     /translation="MTKADFISLVAQTAGLTKKDATTATDAVISTITDVLAKGDSISF
                     IGFGTFSTQERAAREARVPSTGKTIKVPATRVAKFKVGKNLKEAVAKASGKKKK"
     gene            complement(2346..>3736)
                     /gene="ciaB"
                     /locus_tag="RJ336_001617"
     CDS             complement(2346..>3736)
                     /gene="ciaB"
                     /locus_tag="RJ336_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="invasion protein CiaB"
                     /protein_id="HDZ5214049.1"
                     /translation="STQFPNLDDAMEFLRKNHLYQKTPEGEICERSYGVLVRIGNLWK
                     FVPYARFFENEILKLEFAFENMIDQLKIFASSEEEKAYIEYFEKLKLAFCEKDEDRVI
                     KAWQEAEFAWMKVKSPLQVGHPLEYYEDNYTHAVALEWDIRIEDENDFDVLKFGSEIK
                     ESFEHVYKNIGLEDCELEKEVLSNIEKTQLYICTPMIFYGAELKGLFSAQVVPNDEFV
                     SSKAGKKIFAFINFVYENAKTKPFMKISSEVFDKEFLDFGRNILFYQEKIWKRVYEVS
                     TIGHEFGHIFFIANDTEKTMNQSGFFKNIEEYKATTGGLINFFYHEQDDLIMPVFHEL
                     IKRAIGLISWQRVDEVRPYYTEGLIHLSLLFESEVLIFENNNLKINFDLGHYEKFKEL
                     TLKNYHELAKHYALRLDAKEFLSRFCEIKDNIFLPIMPKCKEFVKFYYDLYEKIGNEI
                     DNSGEFERYKKK"
BASE COUNT         1307 a          631 c          415 g         1383 t
ORIGIN      
        1 aacaaaagct gatttttcta ccccattgac ttgcgatctt aatgttaaag actgcacata
       61 tagttttaat aataaagaag tcttaatttc cctaaatccc aaacccttac aatctttaga
      121 tgttacaaat ctaaagattg taaatctagg aaattataac aacttaggaa ttaaaattta
      181 tggattaaat atgtatatgg gtgaaattaa acctaaaata catcgattaa attcaacaga
      241 ctatgaaagt aaaatagttc ttgctgcttg cgttttagat actatgcgtt ttagggtaga
      301 atttatggat aataataaac ccatagggtt ttattttgat tttgagctaa aaaaatgaaa
      361 aaaaatatta ttttgtttat agttatagtt gccattattt taggtgtaat attttttatt
      421 aaaaatcatc aaaattctta tgattttatc ttaaaatcag acttaaaaga ggaaaccacc
      481 ctaaaagatt ttaaaggaga taagcttatt atctattttg gatacactta ttgccctgat
      541 gtttgtccag caactcttag tttagcaggc aaagccttaa agcaaatcaa taatcctaag
      601 gctcaccttc tttttatttc tttagatcca aatagagata ataacttaag caatacaaac
      661 gaatggttac gatactttta tccaaaagca gatgctttaa ttgcaaaaga tgaaaaaact
      721 cttcaaaaaa taacaaaaca atataatgtt caatatcaaa aaatagatct aaatgattct
      781 tttatgggtt attctataac acatagcaat atgctttatc ttattgatga aaaaggtcat
      841 ttttataaag aaattagcga tttaaatcca caagaaattt taagagaact tagaattttt
      901 ctaaattctc aataattata cttaagcaaa aagatcagtt gagaggtatc tttcagccgt
      961 atcgtttagc atagttaaaa ttcttttatc tggaaatttc tttgctagca tacttgcggc
     1021 aaatacattt gctccacttg atatacctac cattaaacca cttttggcaa gttctttggc
     1081 tgtatttata gcatcttcat tacttaccgt gatcacttca tctataattt ctttatttaa
     1141 aatagcaggt ataaaattcg cccctattcc ttgtatttta tggcttcccg cttcaccttt
     1201 gctaagcaat ggagaattta gaggctcgac tccaacaata tgcacttttt ctaatttttc
     1261 ttttagtatt tccccaactc cactaatagt accgccagtt ccaaaaccag ctacaaaaat
     1321 atcaagttca ttatccaaat ctcttaaaat ttctaaagcc gtattcttac gatgcgcatt
     1381 tttatttgaa atattttcaa attgagaaac cataaaagaa tttggagtat ttaataatat
     1441 ttcatttgct ttatcaaccg ctcctttcat tcctaaattt acaggagtta attctaacct
     1501 agcgccaaag agtgttatca tttttcttct ttctaaactc atagattcag gcattacagc
     1561 aataaattta agtcccaaat ctgcacaaat catagccaaa gaaattccag tatttccact
     1621 agttgcttca actattgtag tatcttgatt aattttttta ctatctaaag catctttaat
     1681 catttcaaaa gctgctctat cttttataga atgactagga tttaaaaatt cacatttagc
     1741 aaaaacattg ataccaaatt ttttcaaatg tataatagga gtatttccta taagctcact
     1801 tactttttca tgtactttca taattttaat atcctttttt gtttaataat gatagtttta
     1861 taaaagttta aaaaaataaa gtaaataaaa gatacaaaat atctgaatta attaagaaag
     1921 aaggctagaa tttatctagc cgaagtttta ttttttcttt ttgccgcttg cttttgcaac
     1981 agcttcttta aggtttttac ctaccttaaa ttttgcaact cttgtggcag gaactttgat
     2041 tgtttttcct gtgcttggta ctctagcttc tctagcagct ctttcttgag ttgaaaaagt
     2101 accaaaacca ataaaactaa tgctatcacc tttagccaaa acatcagtaa tagtagaaat
     2161 aactgcatca gtagcagtag tagcgtcttt ttttgttagc ccagctgttt gagcaactaa
     2221 tgaaatgaaa tctgctttag tcataaaagc tcctttgttt taattgaaac gcctaatttt
     2281 agcatattta aaaaacaata tcaagtaaaa aacagctttt tttaagtttt tttcaaaaaa
     2341 ctttattatt ttttcttata tctttcaaat tctccgctat tatcaatttc attgccaatt
     2401 ttctcgtata aatcataata aaatttaaca aattctttac acttaggcat aataggaaga
     2461 aaaatattat ctttaatttc acaaaatcta cttaaaaact cttttgcatc aagtcttaaa
     2521 gcatagtgtt ttgctaattc atgataattt tttaaagtta gttctttaaa tttttcataa
     2581 tgccctaaat caaaatttat cttcaaatta ttattttcaa aaatcaatac ttcactttca
     2641 aaaagcaaac taagatgaat aagtccttct gtataataag gtctaacttc atcaaccctt
     2701 tgccaagaaa taagtccaat agctcttttt ataagttcat gaaaaacagg cattatcaag
     2761 tcatcttgtt catgataaaa gaaatttata agtccacctg tagtagcttt atattcttct
     2821 atatttttaa aaaaaccact ctgattcatt gttttttcgg tatcattagc aataaaaaat
     2881 atatgaccaa attcatggcc tatagttgat acctcataaa cccttttcca aattttttcc
     2941 tgataaaata aaatatttct tccaaaatcc aaaaattctt tatcaaaaac ctcgctagaa
     3001 attttcataa aaggctttgt tttagcattt tcatatacaa aatttataaa ggcaaatatt
     3061 tttttgcccg ccttagaact tacaaactca tcatttggaa cgacttgagc tgagaataaa
     3121 cctttaagtt cagcaccata aaatatcatc ggagtgcaaa tataaagttg agttttttct
     3181 atattagata aaacttcttt ttctaattca caatcttcaa gtcctatatt tttataaaca
     3241 tgttcaaaac tttccttaat ttcactacca aatttcaaaa catcaaaatc attttcatct
     3301 tctattctta tatcccattc taatgccacc gcatgagtat aattatcttc ataatattct
     3361 aaaggatgtc ccacttgtaa aggtgatttt actttcatcc aagcaaattc agcttcttgc
     3421 caagctttta taaccctatc ttcatctttt tcacaaaacg ctaattttaa tttttcaaaa
     3481 tattctatat aagctttttc ctcttcgctg ctagcaaata ttttaagctg atcaatcata
     3541 ttttcaaaag caaattctaa ttttaaaatt tcattctcga aaaatctcgc ataaggaaca
     3601 aatttccata aatttcctat tctaactaaa acaccatagc ttcgctcaca aatttctcct
     3661 tctggagttt tttgatataa atgattttta cgtaaaaatt ccattgcatc atctaaattt
     3721 ggaaattgag tagata
//
LOCUS       DAPWGO010000112         3662 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.114, whole genome shotgun sequence.
ACCESSION   DAPWGO010000112 DAPWGO010000000
VERSION     DAPWGO010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3662)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3662)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3662
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.114"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(143..310)
                     /locus_tag="RJ336_001618"
     CDS             complement(143..310)
                     /locus_tag="RJ336_001618"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214050.1"
                     /translation="MKLYIILTFLKDDESIDIYYPPNFYEDTSIFNIVEHSFFNSREY
                     YKNYKLLIVLI"
     gene            complement(544..849)
                     /locus_tag="RJ336_001619"
     CDS             complement(544..849)
                     /locus_tag="RJ336_001619"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214051.1"
                     /translation="MQKIDENFKKEKEQNKDLELNKFQITSREIFTIKTPENKDVEVE
                     LTCTAGLIQTSQINYEEIVRKEFLYKCFPVTWNDFLKLNKYEKNWHIQLKIVMILDC"
     gene            complement(1023..1466)
                     /locus_tag="RJ336_001620"
     CDS             complement(1023..1466)
                     /locus_tag="RJ336_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HDZ5214052.1"
                     /translation="MIFFNNLQRDANFYSIPKLNVSASTSGDNELIGLEGYETGEMLE
                     LSKAFFKTTPKNMKAIKVDGYSMVPMLLPDSWVVFEETHKYQGDGLYILNFDNQLMVK
                     LLQLDPISKVLDIISVNKDYKSYSLDLKDSQVELIIQGKVLRFII"
     gene            1450..1617
                     /locus_tag="RJ336_001621"
                     /pseudo
     CDS             1450..1617
                     /locus_tag="RJ336_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004297138.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
     gene            2056..2607
                     /locus_tag="RJ336_001622"
     CDS             2056..2607
                     /locus_tag="RJ336_001622"
                     /inference="COORDINATES: protein motif:HMM:NF017885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HDZ5214053.1"
                     /translation="MTYKEIKDKTPYEILDLLEMKEPPFNPFEIAQKLGINVVKDLDL
                     DKIDTEGQISVDEKGEPIIWINPLKNENRQRFTLAHELGHLANDILPSIENPIIDSYE
                     TLYRSNTYGGIETRANQFAARLLMPLRQIEDFIAECRKTTPDLKAAEAILLIASKFEV
                     SKQAVFHRLKNVGLIKQDYTYPF"
     gene            complement(2604..2888)
                     /locus_tag="RJ336_001623"
     CDS             complement(2604..2888)
                     /locus_tag="RJ336_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214054.1"
                     /translation="MDRVSADIRQGVNKRFINAICNHNNELVLEYLKNGMSVTKECMG
                     KEPMFYAVTHNNFGAILLLLKYGAILDKEYLEESNKNFSKEALEFLASLL"
     gene            complement(2948..3577)
                     /locus_tag="RJ336_001624"
     CDS             complement(2948..3577)
                     /locus_tag="RJ336_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HDZ5214055.1"
                     /translation="MQMQEVIEKLKDILASEGKCNLKTKDIAKELGIHPDTFNSMKFR
                     NSIPYPQILNFLNQRNISINYFFYGSSPKDQLECENKYKILKLYKTNASLGGGGINDL
                     IDSSDLIIDEKVLNFFGSKECEFITCYGESMEPIIKDGSICVIDRNKTFKNKSICVIN
                     TRDGLFIKQVLKQDDGVILHSLNPLYEDIFYKNGDFLLIGVVIGELSRL"
BASE COUNT         1309 a          535 c          450 g         1368 t
ORIGIN      
        1 taaacttaaa atataacttt attaaaataa aactaacaaa aaattcgttt atgatgttca
       61 ttttctttaa caatagtttt catatccaaa taatgcttta ctatatattt tggaatgtta
      121 aagtcgcaat cagagtgtgg ctttaaatca aaacgattaa aagtttgtaa tttttataat
      181 attccctact gttaaaaaaa ctatgttcta ctatattaaa aattgatgta tcttcataaa
      241 aatttggcgg ataatatata tctatacttt catcatcttt taaaaaagta agtattatat
      301 aaagcttcat tcaactcatc acccctatgc attgtttgca taggaaaata gcttccttct
      361 ggtatttcat taaaaagaag tcgatatagt agcgataagc ttttaaactt aatttgcttt
      421 ttatttgaac ggggtccgaa aattcgtgca aatatctctt cctagatcgt atatcttttt
      481 taaaatattc aggaagttca ctttgtcatt ttaaatattt gaatatttgc tcataaacct
      541 cttttaacaa tccaatatca tcacaatctt taactgtata tgccaatttt tttcatactt
      601 gttaagcttt aaaaaatcat tccaagttac tggaaaacat ttgtataaaa attcttttct
      661 aacaatctct tcataattaa tttggctagt ttgaattaat ccagctgtac aagttaattc
      721 aacctcaaca tctttattct ctggagtttt tatggtaaaa atttcgcgtg aggttatttg
      781 aaatttatta agttccaagt ccttattttg ctctttttct tttttaaaat tttcatcaat
      841 tttctgcatt ttttacctat gctcttcgtt gattttttgc atttcctgct tatattcatt
      901 ccaaatttct tttagcggct tatttggtgt tccttttatt tttctatata aataattaca
      961 taaaagaaaa taaagatact tattaatatt agcaacacaa tattcacttt aattccttta
     1021 aattatataa taaaacgcaa aactttgcct tgtataatca gctcaacttg cgagtctttt
     1081 aagtccaaac tatagctttt ataatcctta tttacactaa taatatctaa aactttactt
     1141 attggatcta attgcaaaag tttaaccatt aattggttat caaaatttaa aatatacaat
     1201 ccatctcctt gatacttatg cgtttcttca aaaacaaccc agctatcagg taaaagcatt
     1261 ggaaccatag aataaccatc aactttaata gctttcatat ttttaggcgt tgttttaaaa
     1321 aaggctttac taagctcaag catttcacct gtttcatatc cttcgagccc aattaactca
     1381 ttgtcaccac tggtagaagc cgaaacatta agttttggta ttgaataaaa attagcatct
     1441 cgctgcaagt tgttaaaaaa tatcaagggt aaatttatgc tttcttataa tgattgtgag
     1501 cttataagag agctttataa agattttaat attaaggaat taaaagtaag gtattcttta
     1561 aataataatg ttttaaaaag aaaagaaagt aaagagcttt tgattatgaa tttttagcaa
     1621 gctaagagag taaaaatact ctctttaata tttaattttg taaaaatatg gtaaagtacc
     1681 tttaaaatta aaaataattt aaggatttat tatagaaaac aattacacca attctgatat
     1741 tattactatt gcaagttctt atctaactta tggaagttta attgttgcta ttgctatttt
     1801 cttaacagct gttattgcca tagggcttac tatatattat aaccgtgata aacaaagatt
     1861 aataaaagaa acaactgatg tatttttaaa taaaattata gaagatgaga aattacgcaa
     1921 tgattttata aataaaattc taaaaaatag tgaatttatg gaagaatttg aaagaatggt
     1981 cgatttacat ataaatgata aaatatctat attgacagat attgatcaag aaaaatcaca
     2041 aataggaggt ttggaatgac ttataaagaa ataaaagata aaacccctta tgaaatttta
     2101 gatttattgg aaatgaaaga accaccattt aatccgtttg aaattgctca aaaattaggt
     2161 ataaatgtag ttaaagatct tgaccttgat aaaattgaca ctgaaggtca aattagcgta
     2221 gatgaaaaag gtgaacctat tatttggata aatccgctta aaaatgaaaa tagacagcgt
     2281 tttacattgg cacatgaatt agggcattta gctaatgata ttttacctag catagaaaat
     2341 cctattattg atagttatga aaccctttat agaagcaata catatggtgg aatagaaact
     2401 agagccaatc aatttgcggc aagactactt atgcctcttc gacaaataga agattttata
     2461 gcagaatgca gaaaaacaac acctgactta aaggcagcag aagcaatatt acttattgct
     2521 tcaaaattcg aagtttcaaa gcaagctgtt tttcacagac ttaaaaatgt aggtctgata
     2581 aaacaagatt atacatatcc tttttagagc aaagaggcta aaaattctaa agcttctttg
     2641 ctaaaatttt tattgctttc ttctaggtac tctttatcta aaatagcacc gtattttaat
     2701 aaaagtaaaa tcgctccaaa attattatga gttactgcat aaaacatagg ctctttaccc
     2761 atgcattctt tagtaacact cataccattt ttaagatatt ctaaaacaag ttcattgtta
     2821 tgattgcaaa ttgcgtttat aaatcttttg ttaacacctt gtcttatgtc tgctgatact
     2881 ctatccatct ttatatcctt ttgtattgat gagacaagat tagcttggct tagcttattg
     2941 tgtgctgtca tagtcttgaa agttctccaa ttaccacacc aattagcaaa aaatctccat
     3001 ttttataaaa tatatcttca tataaaggat ttaaagagtg taaaatcact ccatcatctt
     3061 gttttaaaac ttgttttata aaaagtccat ctctagtatt aatcacacaa atgcttttat
     3121 tcttaaaagt tttatttcta tctattacac aaattgaacc atcttttatt attggttcca
     3181 tactctctcc gtaacaagta ataaactcac attctttact tccaaaaaag tttaaaacct
     3241 tttcgtcgat gattaaatca gagctatcaa tcaaatcatt tataccacct ccgcctaaac
     3301 ttgcatttgt tttataaagc tttaaaattt tatacttgtt ttcacattct aattgatctt
     3361 ttggggaact tccatagaag aaataattaa tgcttatatt tctttgattt aaaaagttta
     3421 ggatttgtgg atatggaatg gagtttctaa atttcatgga attaaaagta tcaggatgaa
     3481 ttcctagttc tttggctata tcttttgttt ttaaattaca cttaccttca ctggctaata
     3541 tatcttttaa cttttcaatc acttcttgca tttgcatgtt aaatcctttg attttaattt
     3601 caaagaaatt taacaaaaaa ttacaaaagg caattaaaaa cttttgtttt aaaaggttaa
     3661 tt
//
LOCUS       DAPWGO010000113         3521 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.115, whole genome shotgun sequence.
ACCESSION   DAPWGO010000113 DAPWGO010000000
VERSION     DAPWGO010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.115"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..487
                     /locus_tag="RJ336_001625"
     CDS             <1..487
                     /locus_tag="RJ336_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDZ5214056.1"
                     /translation="LSDPKKLFSVLIFTLVVVFIQNYIAQNSSFEGKVVRIIDGDTIE
                     VNHENKLTRIRFFGIDAPELKQSFGKQSKEALSRILSGKQVEIIYKNKDTYGRIVAIV
                     KLNNVDINRFLVSKGYAWADTYYSNAYIKEQENAKKNHLGLWKEGNPIEPYKWRKHNK
                     F"
     gene            496..669
                     /locus_tag="RJ336_001626"
     CDS             496..669
                     /locus_tag="RJ336_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214057.1"
                     /translation="MKKYTLMILLVLGISGCFVNERGISNRFYDDCKEYYDGSGTYHK
                     VCPKNWVDIKMTP"
     gene            complement(670..1248)
                     /locus_tag="RJ336_001627"
     CDS             complement(670..1248)
                     /locus_tag="RJ336_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214058.1"
                     /translation="MAKKDNFEEYAQLEEYASAEDISRVRAELLTCPELNTSLTGTII
                     EIDKNYAKSILITTSEMVADDQGLIFDAFIFAAANYVAQASINKEFSVIIGSKCFFYA
                     PLKLGDVLELEAHALFDETSKKRDVKVVGHVKEIKMFEGTIQVVSTDEHIFKLKRPPL
                     NTVKPTENQEQGAKINNPEAVAAALMASVGGK"
     gene            complement(1320..2210)
                     /gene="cmoB"
                     /locus_tag="RJ336_001628"
     CDS             complement(1320..2210)
                     /gene="cmoB"
                     /locus_tag="RJ336_001628"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HDZ5214059.1"
                     /translation="MSRIKMQENLLEKQFLNHPLYTKIQELKALNLACNFSLDDSVNL
                     STNSQAKDEILAITKELKPWRKGPFKIDDLFIDTEWQSFIKFNILKPFMNEISQKCVA
                     DIGCNNGYYMFKMLEFNPAKLIGFDPSIKYRLQFELINALAKTPIEYELLGVEDLPRY
                     GLKFDVIFCLGVIYHRSDPIKMLKDLKAGLNKNGVVFLDTMYIEDEREIALVPNKTYS
                     KIPNIYFVPSISALKNWCERAGFKEFEVLATKKTDENEQRKTEWIDSFSLENFLDPKD
                     KNLTIEGYEAPKRVYVRIGI"
     gene            complement(2284..2891)
                     /locus_tag="RJ336_001629"
                     /pseudo
     CDS             complement(2284..2891)
                     /locus_tag="RJ336_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854639.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
     gene            complement(2901..3500)
                     /locus_tag="RJ336_001630"
     CDS             complement(2901..3500)
                     /locus_tag="RJ336_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin family protein"
                     /protein_id="HDZ5214060.1"
                     /translation="MDKLITWNEKYSIHDTMIDIQHQKLFELAGKVESAVYKFVKREE
                     LKEILTELFNYMKEHFDNEEQYMQEIHYPYLNEHKIMHKNIIRDMSYLIQNIKTTNDL
                     KEKLYTIMSEWLLEHILHHDVMIGKWIKAHNKNTKEEETKQEELTEDSQEKLEFIYSC
                     PCKTTHALSYNEHLDILYHNKNLKCKNCQQTLFYFKNPI"
BASE COUNT         1140 a          524 c          504 g         1353 t
ORIGIN      
        1 actaagtgat ccaaaaaaac ttttttctgt attaattttt actcttgtag ttgtttttat
       61 ccagaattat attgcccaaa attctagttt tgaaggaaaa gtagttagaa ttattgatgg
      121 agatactata gaagttaatc atgaaaacaa actcactaga ataagatttt ttggtataga
      181 tgcaccagaa cttaaacaaa gttttggaaa gcaatcaaaa gaagctttaa gtagaatttt
      241 aagcggtaaa caagttgaaa ttatttataa aaataaagat acttatggta gaattgttgc
      301 tattgtaaag cttaataatg ttgatattaa tcgattttta gtaagcaaag gctatgcttg
      361 ggctgatact tactatagta acgcttatat taaagaacaa gaaaatgcta agaaaaatca
      421 tttaggtctt tggaaagagg gtaatcctat agagccctat aaatggagaa aacacaataa
      481 attctaagga aaaacatgaa aaaatatact ttaatgatac tattagtttt aggaatttct
      541 ggatgttttg taaatgaaag aggaatttca aatcgttttt atgatgattg taaagaatat
      601 tatgatggaa gtggaactta tcataaggtt tgcccaaaga attgggtgga tattaaaatg
      661 actccttgat tattttccac ccacagaggc cattaatgca gctgctacgg cttctggatt
      721 gttgattttg gcaccttgtt cttgattttc tgtaggttta acagtattaa gtggcggacg
      781 cttgagttta aatatatgct catcagtgct aacaacttgt atcgttcctt caaacatttt
      841 aatttcttta acatgcccga ccacttttac atctcttttt ttggaggttt cgtcaaaaag
      901 tgcatgagct tcaagttcta aaacatcgcc taatttaagc ggagcataaa aaaaacattt
      961 tgatccaata atcactgaaa attctttatt gatagaggct tgtgctacat agtttgccgc
     1021 agcgaaaata aaggcatcaa aaatcaatcc ttgatcatct gctaccattt cgcttgtggt
     1081 tattaaaatt gatttggcat agtttttatc aatttctata atggttccag taagcgaagt
     1141 gtttaattca ggacaagtga gtaattctgc tctaacacga gatatatctt ctgcagatgc
     1201 gtattcttca agttgtgcat attcttcaaa attatctttt tttgccatat ctaaccttta
     1261 aattctactt atctacttca aaatatctaa agcctagatc gacaaaaagc aaaaagaatt
     1321 tatatcccaa tacgcacata aactcttttg ggtgcttcat agccttcaat ggtaagattt
     1381 ttatcctttg gatctaagaa attttccagc gaaaaagagt ctatccattc tgtttttctt
     1441 tgttcgtttt catcggtttt ttttgtagcc aaaacttcaa attctttaaa tcctgctctt
     1501 tcacaccagt tttttaatgc actaatgctt ggtacaaaat aaatatttgg aattttagaa
     1561 taagttttat taggcacaag agcgatttct ctctcatctt ctatatacat ggtatctaaa
     1621 aaaacaactc catttttatt aagtcctgct tttaaatctt ttagcatttt tataggatca
     1681 cttctatgat aaatcacccc aagacagaaa atcacatcaa atttcaagcc atatcttgga
     1741 agatcttcta cgcctaaaag ttcatattct ataggagttt tagctaaagc gttaatgagt
     1801 tcaaattgca aacggtattt gatagaagga tcaaaaccta tgagttttgc aggattaaat
     1861 tcaagcattt taaacatata ataaccatta ttacagccta tatcagcaac gcatttttga
     1921 gaaatttcgt tcataaaagg ctttaaaata ttaaatttaa taaaactttg ccattctgta
     1981 tcgatgaaaa gatcgtctat tttaaaagga ccttttctcc atggtttaag ttcttttgtt
     2041 atagctagga tttcatcttt ggcttgagaa tttgtagata aatttacact atcatctaaa
     2101 gaaaaattac aagcaagatt gagagcttta agttcttgaa ttttagtgta taaagggtga
     2161 tttagaaatt gtttttcgag taaattttct tgcattttta tccttgacat ttgcttttaa
     2221 tgctaaatta taacattaaa agcttttaga attagcaagt ataagctaag attattttta
     2281 aaatcaaaac ccttccgaat aaaccttata aaattctaaa gcttctctac attttttaca
     2341 tttgaatttc ttaccttgta atttgatttt ttcatgaatt ccaaaaggta catcatgcat
     2401 ttgtcctacg cattcacatg tataaagata aactgcattt tcatcatctt tttcttcttt
     2461 gacttcttca aagcttactt ccccatcatc ttcagaagct aaagaagatc ttctgtattg
     2521 ttcaactttc atatcttcat aaagtatatg ttctaaaagc cattttttaa cagctaaata
     2581 aagtttttct tttaaatcat tagtggattt aatattttta atcagttcta tcatggattg
     2641 gataatatgt ttatgaattt tttatgtgtt tcaatatctg gatatttaat cagttccatg
     2701 tatcgctctt cttcataaaa atgatctttc atataattaa aaaattcagc aagtaaattt
     2761 ttaatctcat ccttataaac gggtttatca atcaaatatt ctaccttacc cgcaagttca
     2821 aaaagctttt tgtgctgttc atctattttg gcattatgga cactaaaggt tttatcccat
     2881 tttggtagca ttttattcct ttatattgga tttttaaaat aaaataaggt ttgttggcaa
     2941 tttttgcact ttaaattttt attgtgatat aaaatatcta agtgttcatt gtatgataaa
     3001 gcatgagtgg ttttacaagg acaagaatat ataaattcta atttttcttg agaatcctct
     3061 gttaattctt cttgttttgt ttcttcttct ttagtgtttt tattgtgagc tttaatccat
     3121 ttgcctatca taacatcatg atgtaatatg tgttctaaaa gccactctga cattatagta
     3181 taaagttttt cttttaaatc attagtagtt tttatgtttt gtataagata agacatatcg
     3241 cgaatgatat ttttatgcat gattttgtgt tcatttaaat aaggataatg aatttcttgc
     3301 atgtattgtt cttcattgtc aaaatgttct ttcatgtagt taaaaagttc tgttaaaatt
     3361 tctttgagtt cttctcgttt tacaaattta taaacagcac tttcaacctt gcctgcaagt
     3421 tcaaaaagtt tttggtgttg aatgtcaatc attgtatcat gaatactgta tttttcattc
     3481 caagtgatta gtttgtccaa aatttctcct atccacccct t
//
LOCUS       DAPWGO010000114         3218 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.116, whole genome shotgun sequence.
ACCESSION   DAPWGO010000114 DAPWGO010000000
VERSION     DAPWGO010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3218)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3218)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3218
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.116"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            59..280
                     /locus_tag="RJ336_001631"
     CDS             59..280
                     /locus_tag="RJ336_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214061.1"
                     /translation="MVKNLIIKFGRLILDAIAAISFVVALLYSLFMMFSIGFLAGLLS
                     LIVSFIALFLSFFVIYLVIDIRDALVNKA"
     gene            complement(305..1312)
                     /gene="pyrC"
                     /locus_tag="RJ336_001632"
     CDS             complement(305..1312)
                     /gene="pyrC"
                     /locus_tag="RJ336_001632"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HDZ5214062.1"
                     /translation="MKLKNPLDMHLHLRDNQMLELIAPLSARDFCAAVIMPNLIPTLC
                     NLEDLKAYKMRILKACKDENFTPLMTLFFKNYDEKFLYSAKDEIFGIKLYPAGITTNS
                     NGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVMDRESNFAKIYEKLAKHFPRLK
                     IVMEHITTKTLCELLKDYENLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDK
                     EALCELAFSGYEKVMFGSDSAPHPRDTKECCGCAAGIFSAPVILPVLAELFKQNSSEE
                     NLQKFLSDNACKIYDLKFKEDKILTLEEKEWQVPNVYEDKYNQVVPYMAGEILKFQLK
                     H"
     gene            complement(1302..1547)
                     /locus_tag="RJ336_001633"
     CDS             complement(1302..1547)
                     /locus_tag="RJ336_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="HDZ5214063.1"
                     /translation="MKFENLIREILGKKRFELLKFLCENADENGFIMIKISDLEEKLH
                     QSKPTIIATFKFLEEKKLFKRLKNGFYQLNIGDKNET"
     gene            complement(1544..1900)
                     /locus_tag="RJ336_001634"
     CDS             complement(1544..1900)
                     /locus_tag="RJ336_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDZ5214064.1"
                     /translation="MKPKYHFLNNARYALEGLFALFKNEMAFRIELCIIIPAIVFSFF
                     LKVSFLEHLLLISVLILILIVEALNSAIEACVDLITNEWHEKAKIAKDCASAAVFFSV
                     LLALFVWGFILYNIYL"
     gene            complement(1897..>3218)
                     /gene="eptC"
                     /locus_tag="RJ336_001635"
     CDS             complement(1897..>3218)
                     /gene="eptC"
                     /locus_tag="RJ336_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipid A/FlgG phosphoethanolamine transferase
                     EptC"
                     /protein_id="HDZ5214065.1"
                     /translation="SFLSVYFISFYGVLIDSDMIQNVVQTDIKEVKDLLNLKLILFIV
                     LALLLVFYVVKVKIDYYDSFKSHLKIKIINIISGLIVVCAVLIPLSKTFLPFFRNYNE
                     IRMYNTPFYQIYAVYRYYIRFVKAKPEFKTIANDAYRENNHTKKLLVLVVGETARAAN
                     YSLGGYTKNDTNFYTKKDNVVFFDNFSSCGTATAVSLPCMFSISKRENYSSSEFQENA
                     MDVLYKTGVDAAWFDNNSGGCKGVCDRLAYKQKLSSDLDENLLIPFKEKLNHLSDQNI
                     IVLHLQGSHGPTYYKRYPSEFKKFTPTCDTNELSKCDNKALINTYDNTLLYTDYLLSE
                     IIKLLKEQKSYESSLFYLSDHGESLGENDIYLHGMPYAIAPSYQTHIPAIFWSNDENL
                     MNLAKEHKGLKLSQDNLFSTLLGYFDVKTSVYEPEYDLLNPKLKANP"
BASE COUNT         1153 a          515 c          398 g         1152 t
ORIGIN      
        1 taaaaatatt aagctgatat ttattacaat ttcactcatt atttcaaagg agtttttaat
       61 ggttaaaaat ttaatcatca aatttggacg cttgattctt gatgcaattg cagcgataag
      121 ttttgttgta gctttgcttt attctctttt tatgatgttt agcattggat ttttagctgg
      181 tttattatcg ctgatagtca gttttattgc tttattttta agtttttttg taatctatct
      241 tgttatagat atcagagatg ctcttgtaaa taaagcttaa attttccacc tttaaggtgg
      301 aaaatcaatg ttttaattga aattttaaaa tttctccagc catataaggc acgacttgat
      361 tgtatttatc ttcataaaca tttggcactt gccattcttt ttcttctaaa gttaaaattt
      421 tatcttcttt aaattttaaa tcataaattt tacaagcatt atcgcttaaa aatttttgca
      481 aattttcttc tgagctattt tgcttaaata attcagctaa aacaggtaaa atcactgggg
      541 cgctaaatat acctgcggca caaccacaac actctttagt atctcttggg tgaggcgcac
      601 tatcacttcc aaacataact ttttcataac cactaaaagc aagttcgcaa agggcttctt
      661 tatcttcgta acgcttggct ataggcttac aaaaaagatg aggattcatt ttacctccga
      721 taacatcatc taaagtgatg attaaatgat gtaaagtgat tgtcgcgtat aaattttcat
      781 aatcttttaa aagttcacat aaagttttag tggtaatatg ctccataaca atcttaagtc
      841 gtggaaaatg tttggctaat ttttcataaa ttttagcaaa attactttcc ctgtccatta
      901 caaaatcatt ggtttctcca tgcactaaca aaggaatatt taaatcactc atagcctcta
      961 aagtaggttt taaatactct atatcaaaac ttgaaactcc accatttgaa tttgttgtaa
     1021 ttcctgctgg ataaagctta atgccaaaaa tttcatcttt agcactgtaa agaaatttct
     1081 catcataatt tttaaaaaaa agtgtcatta aaggagtgaa attttcatct ttacaagcct
     1141 taaggatacg cattttataa gcttttagat cttctaaatt gcaaagtgta gggattaaat
     1201 ttggcataat cacagctgca caaaaatctc ttgcactcaa aggtgcaata agttctaaca
     1261 tttgattatc tcttaaatgc aaatgcatat ctaaaggatt tttaagtttc atttttatct
     1321 cctatattta gctgataaaa tccattttta agacgcttaa aaagtttttt ttcttctaaa
     1381 aacttaaaag tagcgatgat ggtaggttta ctttgatgta atttttcttc aagatcactg
     1441 attttaatca taataaaacc attttcatcg gcattttcac ataaaaattt taacaattca
     1501 aaacgctttt ttcctaaaat ttctcgtatt aaattttcaa atttcataag taaatattat
     1561 ataaaataaa gccccaaaca aaaagagcta aaagcacact aaaaaacact gccgcactcg
     1621 cacaatcttt agcgattttt gctttttcat gccattcatt tgtaatcaaa tcaacacaag
     1681 cttcaattgc cgaatttaaa gcttctacaa ttaagataag tattaagaca cttatcaata
     1741 acaaatgctc caaaaaacta acttttaaaa aaaaactaaa aactatcgcg gggataataa
     1801 tgcaaagttc aattctaaac gccatttcat ttttgaataa agcaaaaagc ccttctaaag
     1861 catatcttgc gttatttaaa aaatgatatt taggcttcat ggatttgcct taagtttagg
     1921 atttaataaa tcatattctg gttcataaac acttgttttt acatcaaaat atcctaaaag
     1981 agtgctaaaa agattatctt gagaaagttt taaaccttta tgctctttag ctaaattcat
     2041 taaattttca tcattgctcc aaaaaatagc aggaatatga gtttgataac ttggtgctat
     2101 agcataaggc ataccatgaa gataaatatc attttcaccc aaactttcac catgatctga
     2161 aagataaaac aaagaacttt catagctttt ttgctctttt aatagtttta taatctcact
     2221 taaaagataa tctgtataaa gtaaagtatt gtcataagtg ttgattaaag ccttgttatc
     2281 acattttgaa agctcattag tatcacaagt tggagtgaat tttttaaatt cacttggata
     2341 gcgtttataa taagttggcc catgagaacc ttgcaaatga agaactatta tattttgatc
     2401 acttaaatga tttaattttt ctttaaaagg aatgagtaaa ttttcatcca aatcactaga
     2461 aagcttttgc ttataagcta atctatcaca aaccccttta caaccaccag aattattatc
     2521 aaaccatgca gcatctacac ctgttttata aagcacatcc atcgcatttt cttgaaattc
     2581 tgaacttgaa taattttcac gcttagaaat agaaaacata caaggtaaac ttaccgctgt
     2641 tgctgttcca catgatgaaa aattatcaaa aaagactaca ttatcttttt tggtataaaa
     2701 attggtatca tttttagtat atccacccaa agagtaattt gccgctctag cggtttcacc
     2761 caccaccaaa accaaaagtt ttttagtgtg attgttttct ctataagcat cattagctat
     2821 agttttaaat tctggcttag cttttacaaa acgaatataa tagcgatata cggcataaat
     2881 ttgataaaaa ggagtattat acattcttat ttcattatag tttctaaaaa aaggcaagaa
     2941 agttttactt aaagggatta aaaccgcaca aacaacaatc aaacctgata ttatattgat
     3001 aattttaatt tttagatggg atttaaaact atcataataa tcaattttta ctttaacaac
     3061 ataaaaaacc aataataaag ccaaaacaat aaataagatc aattttaaat ttaacaaatc
     3121 ttttacttct ttaatgtctg tttgaacaac attttgtatc atatcagaat ctataagcac
     3181 cccataaaaa ctaataaagt aaacacttaa aaaagatg
//
LOCUS       DAPWGO010000115         3216 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.117, whole genome shotgun sequence.
ACCESSION   DAPWGO010000115 DAPWGO010000000
VERSION     DAPWGO010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.117"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            282..3188
                     /locus_tag="RJ336_001636"
     rRNA            282..3188
                     /locus_tag="RJ336_001636"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          973 a          604 c          847 g          792 t
ORIGIN      
        1 ataaaaacaa ttttacagga cttgttaaag gataaaacct atttatcttt tctttagttt
       61 aacttatatc ttttaattat ctttatttct ataataaaga gaatattaga tttaagattt
      121 ataaattaaa gacaagtttc aaactcacag cttagttgag actaaatcat ttagttttat
      181 attaagtgtt tgaatgcttt ccgtcttaag ataaagaagt cttatcataa aaactttaac
      241 aaggaagtga tgcgttttag aatcaataaa aaaggtaaaa aaggtaagct actaagagcg
      301 aatggtggat gccttgactg gtaaaggcga tgaaggacgt actagactgc gataagctac
      361 ggggagctgt caagaagctt tgatccgtag atttccgaat ggggcaaccc aatgtataga
      421 gatatacatt acctatatag gagcgaacga ggggaattga aacatcttag taccctcagg
      481 aaaagaaatc aatagagatt gcgtcagtag cggcgagcga aagcgcaaga gggcaaaccc
      541 agtgcttgca ctgggggttg taggactgca atgtgcaaga ggtaagttta gcagaacatt
      601 ctggaaagta tagccataga gggtgatagt cccgtatgcg aaaaacaaac cttagctagc
      661 agtatcctga gtagggcggg acacgaggaa tcctgtctga atccgggtcg accacgatcc
      721 aaccctaaat actaatacca gatcgatagt gcacaagtac cgtgagggaa aggtgaaaag
      781 aactgaggtg atcagagtga aatagaacct gaaaccattt gcttacaatc attcagagcc
      841 ctatgtagca atacagggtg atggactgcc ttttgcataa tgagcctgcg agttgtggtg
      901 tctggcaagg ttaagcaaac gcgaagccgt agcgaaagcg agtctgaata gggcgcttag
      961 tcagatgctg cagacccgaa acgaagtgat ctatccatga gcaagttgaa gctagtgtaa
     1021 gaactagtgg aggactgaac ccataggcgt tgaaaagccc cgggatgact tgtggatagg
     1081 ggtgaaaggc caatcaaact tcgtgatagc tggttctctc cgaaatatat ttaggtatag
     1141 cgttgtgtcg taatataagg gggtagagca ctgaatgggc tagggcatac accaatgtac
     1201 caaaccctat caaactccga ataccttata tgtaatcaca gcagtcaggc ggcgagtgat
     1261 aaaatccgtc gtcaagaggg aaacaaccca gactaccagc taaggtccct aagtcttact
     1321 taagtggaaa acgatgtgaa gttacttaaa caaccaggag gttggcttag aagcagccat
     1381 cctttaaaga aagcgtaata gctcactggt ctagtgattt tgcgcggaaa atataacggg
     1441 gctaaagtaa gtaccgaagc tgtagactta gtttactaag tggtaggaga gcgttctatt
     1501 tgcgtcgaag gtataccggt aaggagtgct ggagcgaata gaagtgagca tgcaggcatg
     1561 agtagcgata attaatgtga gaatcattaa cgccgtaaac ccaaggtttc ctacgcgatg
     1621 ctcgtcatcg tagggttagt cgggtcctaa gtcgagtccg aaaggggtag acgatggcaa
     1681 attggttaat attccaatac caacattagt gtgcgatgga aggacgctta gggctaaggg
     1741 ggctagcgga tggaagtgct agtctaaggt cgtaggaggt tatacaggca aatccgtata
     1801 acaatactcc gagaactgaa aggctttttg aagtcttcgg atggatagaa gaacccctga
     1861 tgccgtcgag ccaagaaaag tttctaagtt tagctaatgt tgcccgtacc gtaaaccgac
     1921 acaggtgggt gggatgagta ttctaaggcg cgtggaagaa ctctctttaa ggaactctgc
     1981 aaaatagcac cgtatcttcg gtataaggtg tggttagctt cgtactagga tttactccga
     2041 aagcgaagaa acttacaaca aagagtccct cccgactgtt taccaaaaac acagcactct
     2101 gctaactcgt aagaggatgt atagggtgtg acgcctgccc ggtgctcgaa ggttaattga
     2161 tggggttagc attagcgaag ctcttgatcg aagcccgagt aaacggcggc cgtaactata
     2221 acggtcctaa ggtagcgaaa ttccttgtcg gttaaatacc gacctgcatg aatggcgtaa
     2281 cgagatggga gctgtctcaa agagggatcc agtgaaattg tagtggaggt gaaaattcct
     2341 cctacccgcg gcaagacgga aagaccccgt ggacctttac tacagcttga cactgctact
     2401 tggataagaa tgtgcaggat aggtgggagg ctttgagtat atgacgccag ttgtatatga
     2461 gccattgttg agataccact ctttcttatt tgggtagcta accagcttga gttatcctca
     2521 agtgggacaa tgtctggtgg gtagtttgac tggggcggtc gcctcccaaa taataacgga
     2581 ggcttacaaa ggttggctca gaacggttgg aaatcgttcg tagagtataa aggtataagc
     2641 cagcttaact gcaagacata caagtcaagc agagacgaaa gtcggtctta gtgatccggt
     2701 ggttctgtgt ggaagggcca tcgctcaaag gataaaaggt accccgggga taacaggctg
     2761 atctccccca agagctcaca tcgacgggga ggtttggcac ctcgatgtcg gctcatcgca
     2821 tcctggggct ggagcaggtc ccaagggtat ggctgttcgc catttaaagc ggtacgcgag
     2881 ctgggttcag aacgtcgtga gacagttcgg tccctatctg ccgtgggcgt aagaagattg
     2941 aagagatttg accctagtac gagaggaccg ggttgaacaa accactggtg tagctgttgt
     3001 tctgccaaga gcatcgcagc gtagctaagt ttggaaagga taaacgctga aagcatctaa
     3061 gcgtgaagcc aactctaaga tgaatcttct ctaagctctc tagaagacta ctagtttgat
     3121 aggctgggtg tgtaatggat gaaagtcctt tagctgacca gtactaatag agcgtttggc
     3181 ttatctttaa taaagcatca cttccttgtt aaggtt
//
LOCUS       DAPWGO010000116         2838 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.118, whole genome shotgun sequence.
ACCESSION   DAPWGO010000116 DAPWGO010000000
VERSION     DAPWGO010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.118"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            89..757
                     /locus_tag="RJ336_001637"
     CDS             89..757
                     /locus_tag="RJ336_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HDZ5214066.1"
                     /translation="MEKLAVINGVDVELEVVDNAVYTTSLSVAEVFNKNHKNIIRKIN
                     EFPKDNFTKLNFEPSKYIDSTGRVLPCYKITRDAFSLLVMGFTGEKAYKWKIEFIKAF
                     NEMEKRLRNIEYEKHDKLAFHQSLGYKSQLKQQKQKYENEIKALKYDLEQSKNNFKDK
                     LNCILAKNGLYAFDFKTFKNYALKLEKMLKDLKDDENKENKLLLRMQNDFLECLELYK
                     SVNI"
     gene            835..1869
                     /locus_tag="RJ336_001638"
     CDS             835..1869
                     /locus_tag="RJ336_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5309 family protein"
                     /protein_id="HDZ5214067.1"
                     /translation="MALPSMGHTSPATENVKLKQSIYETIIKIGATETPILNKIGTSK
                     VTNPLTHSWITDTFEEPKKNANLELSKFVGETKNTAQKTTNATQIFITEAMVSKALLK
                     ANQYGGNEMEYQIGKKTKEHKMDMEYALFGLGRDSDVKKSVFKDYVQAQEATSGEMAG
                     LFHYIAKGKDSFADGKRGNVLAFDETGDWSGTATELTEDKLNQILQTIWNSGVTPKDV
                     FLGADLKGAINKFATRILGNETKLAGQVVSLETDFGTVNFHMHRLLSPKYGLGDVLIA
                     GDFEYMKHGLYIPTMIEDVPTDITAKAKRFYTQSTLEVRNADAFAIGVGLTSGNNAKA
                     KAVLKAAKGA"
     gene            1869..2273
                     /locus_tag="RJ336_001639"
     CDS             1869..2273
                     /locus_tag="RJ336_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002796938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214068.1"
                     /translation="MLCATAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVP
                     SVLLKNVEQGEKVFRQVRNNHFLIIPDEPDFDNEKEHLMIDETLSFAVINYVCYLITR
                     CEEKDFLALCDKIIYEYIANDGKELDDERTWL"
     gene            2254..2448
                     /locus_tag="RJ336_001640"
     CDS             2254..2448
                     /locus_tag="RJ336_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214069.1"
                     /translation="MKEHGCNCNFAKKFNRALSYKDYVQSINSADFIAYLDDKKWLLA
                     MDDLLFFCEKRIKDSDYYEG"
     gene            2451..>2838
                     /locus_tag="RJ336_001641"
     CDS             2451..>2838
                     /locus_tag="RJ336_001641"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214070.1"
                     /translation="MGTSLNELKTGREKLEIINQVLARINSISEAIDNTRLDEVVGLK
                     QACESLKNECLKFKNDIVDKNDDILSKYDDINKKYSNISEKYNNVNAKFDYIKEAYED
                     FSLNKQEIQNIKDFLENNTEEFENLKK"
BASE COUNT         1174 a          312 c          489 g          863 t
ORIGIN      
        1 atgtttgaca atatcatcaa aaaagtatat aattatgcta tatttttacc taataagtaa
       61 aaactaatca aaacaaaaag gacaaaaaat ggaaaaatta gctgtaatta atggcgtgga
      121 tgtagagttg gaagtggtag ataatgcagt atataccact tctttaagcg tggctgaagt
      181 attcaataaa aaccacaaaa atattatacg aaaaataaat gaatttccaa aggataattt
      241 tactaagctc aattttgagc cgagtaaata tattgatagc acgggtagag ttttaccttg
      301 ctacaaaatc actcgcgatg ctttttcttt gcttgttatg ggttttacag gcgaaaaagc
      361 ttataaatgg aaaatcgagt ttattaaagc ttttaatgaa atggaaaaaa gactaagaaa
      421 tattgaatat gaaaagcacg ataagttagc ttttcatcaa agcttaggtt ataaatctca
      481 attaaaacag caaaaacaaa aatatgaaaa tgagattaaa gctttaaaat atgatttaga
      541 acaaagtaaa aacaatttta aagataaatt aaattgtata ttggctaaaa atggtttata
      601 tgcctttgat tttaaaactt ttaaaaatta tgccttaaag ctagaaaaaa tgttaaaaga
      661 tttaaaagat gatgaaaaca aagagaataa actactttta agaatgcaaa atgatttctt
      721 agaatgttta gaactttata aaagtgtaaa tatctaattt atttcaaaac acactatttt
      781 tgaaatagct atttttggaa aaatccttaa aactaaacta aggagaattc aaaaatggct
      841 ttaccttcaa tgggacatac ctcacccgca actgaaaatg ttaaattaaa acaatcaata
      901 tatgaaacga ttattaaaat tggagctact gaaacaccaa ttttaaataa aataggtact
      961 tcaaaggtta caaatccttt aactcatagt tggattactg atacttttga agaaccaaaa
     1021 aagaatgcaa atttagagtt aagtaaattt gtaggtgaaa caaaaaacac agctcaaaaa
     1081 actacaaatg ctactcaaat attcattacc gaagccatgg tatcaaaagc tttattaaaa
     1141 gcaaatcaat atggtggtaa tgaaatggag tatcaaatag gcaaaaaaac caaagaacat
     1201 aaaatggata tggaatatgc tttatttggt ctaggcagag atagtgatgt aaaaaaatca
     1261 gttttcaaag attatgttca agcacaagaa gcaacaagtg gagaaatggc tggacttttt
     1321 cattatatcg ctaaaggaaa agatagcttt gctgatggaa agcgtggaaa tgtattagct
     1381 tttgatgaaa caggagattg gagcggaact gcaacagaac taacagaaga taaacttaat
     1441 caaattttgc aaaccatttg gaatagcgga gttacgccta aagatgtctt tttaggagct
     1501 gacttaaaag gagctattaa caaatttgct acaagaattt taggcaatga aacaaaacta
     1561 gcaggacaag tagtaagcct tgaaacagat tttggaacgg taaatttcca tatgcataga
     1621 ttattaagcc ctaaatatgg tttgggtgat gttttaattg ctggagattt tgagtatatg
     1681 aaacatgggc tttatattcc tactatgatt gaagatgttc caactgatat tactgcaaaa
     1741 gcaaaaagat tttatacgca aagcacttta gaagtaagaa atgctgatgc ttttgctata
     1801 ggagtgggat taactagtgg aaataatgca aaggctaaag cggttttaaa agcagcaaaa
     1861 ggtgcataat gctttgtgct acggctaaaa aactcattat cgctaaagtt aaaaattctt
     1921 acaaaatgat agaagatgat gaagttttga aagcctattt tatggaagca ttttattata
     1981 ttttatcaaa atgtgttcct agcgttcttt taaaaaatgt agagcaaggc gaaaaagttt
     2041 ttaggcaagt taggaataat cattttttga ttattcctga tgagcctgat tttgacaatg
     2101 aaaaagaaca tttaatgata gatgaaacac ttagttttgc tgtgattaat tatgtttgtt
     2161 atttgattac aagatgcgaa gaaaaagact ttctggcatt atgtgacaag ataatttatg
     2221 agtatatagc taatgatggc aaggagcttg atgatgaaag aacatggttg taattgtaat
     2281 ttcgcaaaaa aatttaatag agctttgagt tataaagact atgtgcaaag tataaatagt
     2341 gctgatttta tagcttattt agatgataaa aaatggcttt tagccatgga tgatctgctt
     2401 ttcttttgtg aaaagagaat taaagatagt gattattatg aaggttaaaa atgggaacaa
     2461 gcttaaatga attaaaaaca ggtagagaaa aacttgaaat cataaatcaa gttttagcta
     2521 gaataaacag catttcagaa gcaatagaca atacaagact tgatgaagtt gtaggcttaa
     2581 aacaagcttg cgaatcttta aaaaatgaat gtttaaaatt taaaaatgat attgtagata
     2641 aaaatgatga tattttaagc aaatatgatg atattaataa aaaatattca aatataagtg
     2701 aaaaatacaa caatgtaaat gcaaaatttg attatattaa agaagcgtat gaagattttt
     2761 ctttaaataa acaagaaata caaaacatta aagatttttt agaaaataat acagaagagt
     2821 ttgagaattt aaaaaaag
//
LOCUS       DAPWGO010000117         2749 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.119, whole genome shotgun sequence.
ACCESSION   DAPWGO010000117 DAPWGO010000000
VERSION     DAPWGO010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.119"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..882
                     /locus_tag="RJ336_001642"
     CDS             <1..882
                     /locus_tag="RJ336_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ5214071.1"
                     /translation="FSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSAN
                     YESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARI
                     KGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFND
                     NFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLL
                     TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLE
                     EKLKERKLDKWMERVRK"
     gene            879..2738
                     /locus_tag="RJ336_001643"
     CDS             879..2738
                     /locus_tag="RJ336_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ5214072.1"
                     /translation="MREELFLKNTQALFEVDEFLACTLRSLKYLTFALIQDENGINFK
                     KDDIFLYENPNKELLENLTLFKTEYNKYPVLFFYGFGNGMFYKTLCKNKQHKHIIIFE
                     DNLEILTLAFHLFDFSEELKKEQLILFYTPNINTAQLTTLFTYEIIQKSVKIFNLFIH
                     NDFYQQFYSTQIQNINTQLIEMIRFIVLNKGNDPHDSLVGIKHTLDNLPKMLNHGIFQ
                     EFLKERRAKVENAIIVSTGPSLIKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV
                     CMLERDDIVSKCFDNDFGDFNKGILFILASVVHKEVLDFLEKDQRAYMLVHRPLNFAA
                     SLKLDEYGYLGVGHSVSNMIYELAGALRFENIIFIGQDLAYGEDGSSHPKEHIHGSQG
                     EEIRGEKYTLAYGGKGKVRTQLTWNLFRQAFEKDIFWAKEKLNITTYNCTEGGARIEG
                     TIEKPFLWACENLLDKDLNKPFDFPKFLDKKLAKEKLEKTKKYLQKSILESKEFIKKT
                     QTQLQKLRYTLEKNDKNFQTLEKIKNDLLNLFKEFKKLKLFNELCQAIYFHNECEILK
                     FEVLNTNKQKENLIDFLKIQHNWFIQGLGYLDTQNKTIEKSLENWNFDDIIKK"
BASE COUNT         1110 a          353 c          389 g          897 t
ORIGIN      
        1 tttagtgttg cacatatggc ttgttatctt tccttacatt taaatcataa aaacatcatt
       61 tttataggac aggatttagc ttatgctgaa aatggcaatt ctcatcctga tgattatcaa
      121 aattcagcta attatgaaag tcaaatgtat gaacatattt taaccgaggc ttatggtggg
      181 aaagaaaaaa tcaaaactca ccatgtctgg cttatgttta aacgaaattt agagcaagat
      241 gtgcaaaaaa tacaaaagta tttagatact aaagtttaca actgcaccga aggtggagca
      301 aggataaaag gaaccataga aaaacctttt ctatgggctt gtgagaattt acttgataaa
      361 gatttaaata aaccttttga aaaattagaa cctttaagtt taaataaaca aaatgaattt
      421 ttacttaagg cttattataa agtttgtaaa agtattaagc attgtagaga ttttaacgat
      481 aattttatta aagtttatga taaaataaaa aactctttta tgagtttaca aaattctcaa
      541 aaaaatgaaa tttttattca agaaattatt caagatatag acaaaaccaa aactcaaata
      601 gatgaacttt acaatactca aaaagatttg atacaaattt taggtccctt actaacacaa
      661 tttgaactta atcttgctag aatttatgtt ttaaatccta aaaccaaaga agatgctttt
      721 aataaaagca ttctttggat aaaagaacat ttagaattta tggaattagt ttatggacat
      781 attaaagcac aagaaaatgc tttgattaaa aatatacttc ctttagaaga aaaacttaaa
      841 gaaagaaaat tagataaatg gatggaaagg gtgagaaagt gagagaagag ctttttttaa
      901 aaaatactca agctttgttt gaggtcgatg agtttttagc ttgtacacta agatcactta
      961 aatacttaac ttttgcactt atccaagatg aaaatggaat aaattttaaa aaagatgata
     1021 tttttcttta tgaaaatccc aataaagagc ttttggaaaa ccttactctg tttaaaaccg
     1081 aatataacaa atatcctgtt ttgttttttt atggctttgg aaatggaatg ttttataaaa
     1141 ctttatgtaa aaacaaacaa cataaacaca ttatcatttt tgaagacaat cttgaaattt
     1201 taactttagc ttttcattta tttgatttta gcgaagaatt aaaaaaagaa caactaatac
     1261 ttttttatac tccaaatatt aatacagcac aactcaccac actttttact tatgaaatca
     1321 ttcaaaaaag tgtaaaaatt tttaatcttt ttatccataa tgatttttat caacaatttt
     1381 atagtactca aatacaaaat ataaatactc aactgataga aatgatacga tttatcgttt
     1441 taaacaaagg taatgatcca catgattctt tagttggaat caaacatacc ctagataatc
     1501 tccctaaaat gttaaatcat ggaatttttc aagaatttct caaagaaaga agagctaagg
     1561 ttgaaaatgc tatcattgtt tctacaggac caagtcttat aaaacaactt cctttgttaa
     1621 aaaaatatgc taataaagct acaatttttt gtgcggattc ttcttatcct attttagcta
     1681 aacatggtat aaagcctgat tatgtttgca tgctagagcg tgatgatata gtttctaaat
     1741 gttttgataa tgattttggc gattttaaca aaggcatact tttcatactt gcttctgtgg
     1801 ttcacaaaga agtattagat tttttagaaa aagatcaaag agcttatatg cttgtacatc
     1861 gccctttaaa ttttgcagct agtttaaaac ttgatgaata tggatatctt ggagtaggac
     1921 acagtgtttc aaatatgatc tatgaactag caggagcttt aagatttgaa aatatcattt
     1981 ttataggaca ggatttagct tatggcgagg atggaagttc acatcctaaa gagcatatac
     2041 atggaagtca aggtgaagaa atcagaggag aaaaatatac actagcttat ggaggaaaag
     2101 gcaaagtaag aacacaactt acttggaatt tgtttcgtca agcttttgaa aaagatatat
     2161 tttgggcaaa agaaaaactc aatatcacca cctacaactg caccgaaggt ggagcaagaa
     2221 tagaaggaac tatagaaaaa ccttttttat gggcttgtga gaatttactt gataaagatt
     2281 taaataaacc ttttgatttt ccaaaatttc tagataaaaa actagccaaa gaaaaattag
     2341 aaaaaacaaa aaaatatctc caaaaaagca ttttagaatc caaagaattt ataaaaaaaa
     2401 ctcaaactca gcttcaaaag cttagataca ctttagaaaa aaatgacaag aattttcaaa
     2461 ctcttgaaaa aatcaaaaat gatcttttaa atctttttaa agaatttaaa aaactcaagc
     2521 tttttaatga actttgtcaa gctatttatt ttcataacga atgcgaaatt ttaaaatttg
     2581 aagttttaaa cacaaataag caaaaagaaa atttaataga ctttttgaaa atacaacaca
     2641 attggtttat ccaaggttta ggatatcttg atactcaaaa caaaaccata gaaaaaagtt
     2701 tagaaaattg gaattttgac gatataatca aaaaataatt aggatttcc
//
LOCUS       DAPWGO010000118         2741 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.120, whole genome shotgun sequence.
ACCESSION   DAPWGO010000118 DAPWGO010000000
VERSION     DAPWGO010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.120"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            11..1033
                     /locus_tag="RJ336_001644"
     CDS             11..1033
                     /locus_tag="RJ336_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDZ5214073.1"
                     /translation="MNLSFKTFDISNVQRSKAKKVQGKKYEIFLNENEQSLITPKVSF
                     KEILRYYYLYPKNAIPSFKLPFFKPDLSGFSTPHITWLGHSSLFISFKEYKILIDPVF
                     NTHASPISFINKAFKNTPVYNVNDFNEIFAVIITHSHFDHLDAKSIKALKEKARFFIT
                     PLKVGNYLKSYGVSEKKIIELDWWSGVEFGDLKIIATPAQHSSSRGDGKNKTLWASFV
                     MEFLSVDKRVFFSADGGYFTHFKKIGEYFGSFDLACLESGQFNIAWPYSHSFPDQILK
                     EAKDLNAKAVMPIHWGRFLVGTHAWNEVIKFLYENLDLPLITPKMGEAYEIGAKFKQD
                     FWWKEG"
     gene            1103..1444
                     /locus_tag="RJ336_001645"
     CDS             1103..1444
                     /locus_tag="RJ336_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDZ5214074.1"
                     /translation="MKIIQWNRAEFSPKEVKINVLIDNEKGKEIQILLAKDSVMKEHK
                     APFAIHVQVLSGKIWFEVEKEKFELNVLDMISLEANVAHSLGGLENSIIRLSLNKSDS
                     VQRVNAVLKKP"
     gene            complement(1494..2663)
                     /locus_tag="RJ336_001646"
     CDS             complement(1494..2663)
                     /locus_tag="RJ336_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDZ5214075.1"
                     /translation="MLTKRSQVLEESITLAITALANELKAKGEDIISFSAGEPDFDTP
                     QTIKNAAISAIEKGCGKYTAVAGIPEVLKAIQIKFKKDNNLDYETSEIITNVGAKHSL
                     FECIECLVEKDDEVIIPSPYWVSYPEMVKFAGGKPVFVEGLEENGFKITAEQLKKAIT
                     AKTKVLMLNSPSNPVGSIYSKEELTQIAKVLEGTQITVLSDEMYEKLRYDGFDFVAFA
                     SVSEDALKRTVTINGLSKCGAMPGWRFGYMASKNKALISAVKRLQGQSTSNICSITQH
                     AAIPALNGECDKDIEKMRQAFEKRRNLALDILKQIPNISVYKPEGAFYLFVNIQKIEK
                     DSMNFCQKLLEQEKVAVVPGVGFGMDGYFRLSYATSDELIKKGLERIANFIKNYK"
BASE COUNT          898 a          392 c          466 g          985 t
ORIGIN      
        1 aaggaaaaat ttgaatttat catttaaaac ctttgatatt tctaatgtgc aacgatcaaa
       61 agctaaaaaa gtgcagggta aaaaatatga aatttttctt aatgaaaatg agcaaagtct
      121 tataactcct aaagtgtctt ttaaagaaat tttgaggtat tattatcttt atccaaaaaa
      181 tgccattcct tcttttaaat tacctttttt caagcctgat ttgagtggtt ttagcactcc
      241 gcatattact tggcttggac attcttcgct ttttataagt tttaaagaat ataaaatttt
      301 gattgatcct gtttttaaca ctcatgcttc gcctatttct tttatcaata aggcttttaa
      361 aaatactcct gtttataatg taaatgattt taatgaaatt tttgctgtga ttatcacgca
      421 ttcgcatttt gatcatttag atgctaagag tataaaagct ttaaaagaaa aagcacgatt
      481 ttttatcaca cctttaaaag tgggaaatta tctaaaaagc tatggggtga gtgagaaaaa
      541 aatcatagag cttgattggt ggagtggagt agaatttggt gatttaaaaa tcattgcaac
      601 acctgcacag cacagttcaa gtagaggaga tggtaaaaac aaaacccttt gggcttcttt
      661 tgtgatggaa tttttaagtg tagataagag agtgtttttt agtgcagatg gaggatattt
      721 tacacatttt aaaaaaatag gtgaatattt tggaagtttt gatctagctt gtcttgaaag
      781 cggacagttt aatatcgctt ggccatattc acactctttt cctgatcaaa ttttaaaaga
      841 agcgaaagat cttaatgcaa aggctgtcat gcctatacat tgggggagat ttttagtagg
      901 aactcacgcg tggaatgaag tgataaaatt tctttatgaa aatttagatt taccccttat
      961 cacaccaaaa atgggcgagg cttatgaaat aggggctaaa tttaaacagg atttttggtg
     1021 gaaagaagga taaattaaca caagtttata atctatattt tggtttttgc tatagtttta
     1081 taaaactaaa aaaggagatt ttgtgaaaat cattcaatgg aatagggcgg aatttagccc
     1141 aaaagaagtg aaaatcaatg ttttaattga caatgaaaaa ggtaaagaaa ttcaaatttt
     1201 attagctaaa gatagtgtga tgaaagagca taaagctcct tttgctatac atgttcaagt
     1261 tttaagtggt aaaatttggt ttgaagtgga aaaggaaaaa tttgaattaa atgttttaga
     1321 tatgataagc ctagaggcaa atgtagcgca ttctttaggt ggattagaaa attctataat
     1381 aagattgagt ttaaataaat cagatagtgt tcaaagggta aatgctgtgc ttaaaaagcc
     1441 ttgattttat aaggttttaa tttgcctaaa taattctagg ctttaaccta gaattattta
     1501 tagtttttaa tgaaatttgc tattctttct aaaccttttt tgataagctc atcgcttgtg
     1561 gcataagaaa gtctgaagta tccatccatt ccaaaaccta cacctggaac aacggcaact
     1621 ttttcttgtt caagtaattt ttgacaaaaa ttcatagaat ctttttctat tttttgtata
     1681 tttacaaaaa gataaaaagc accttctggt ttataaacac tgatatttgg gatttgttta
     1741 agtatgtcta aggctaagtt acggcgtttt tcaaaggctt gacgcatttt ttctatatct
     1801 ttatcacatt ctccatttaa agcaggaatg gctgcatgtt gagtgatgga acaaatattt
     1861 gaagtgcttt gtccttgaag tcttttaacg gctgaaatta gggctttatt tttgcttgcc
     1921 atatagccaa aacgccatcc tggcatagcc ccgcatttac taagcccgtt aatagtcaca
     1981 gtgcgtttta aagcatcttc gcttacactt gcaaaagcta caaaatcaaa accatcatag
     2041 cgaagttttt catacatttc atcacttaaa acagtgattt gtgttccttc taaaactttt
     2101 gcaatttgag ttaattcttc tttagaataa atcgacccca caggatttga aggagaattt
     2161 aacatcaaaa ccttggtttt agctgtgata gcttttttta gttgttcagc ggtaatttta
     2221 aagccatttt cttctaagcc ttctacaaat acaggttttc cacctgcaaa ttttaccatt
     2281 tcaggatagc ttacccagta aggactaggg ataatcactt catcatcttt ttctactaaa
     2341 cattctatac attcaaaaag agagtgtttt gcgcctacat tggtgataat ttcgcttgtt
     2401 tcataatcaa gattattatc ttttttaaat ttgatttgaa tagcttttaa tacttcagga
     2461 attcccgcaa cagcagtgta ttttccacat cctttttcaa tagcacttat agcggcattt
     2521 ttgatagttt gtggtgtgtc aaaatcaggt tcgcctgctg aaaaactaat gatatcttcg
     2581 cctttagctt taagttcatt ggcaagtgca gtgatggcta aagtgataga ttcttctaaa
     2641 acttgagatc tttttgtaag catttttcaa tccttaataa tttttgttta attttagcag
     2701 aaaattgcat ttttacaata aatttaattt aaaaatgagt t
//
LOCUS       DAPWGO010000119         2631 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.121, whole genome shotgun sequence.
ACCESSION   DAPWGO010000119 DAPWGO010000000
VERSION     DAPWGO010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2631
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.121"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            17..1441
                     /locus_tag="RJ336_001647"
     CDS             17..1441
                     /locus_tag="RJ336_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDZ5214076.1"
                     /translation="MKKLTNDFGNIIADNQNSLSAGAKGPLLMQDYLLLEKLAHQNRE
                     RIPERTVHAKGSGAYGEIKITADLSAYTKAKIFQKGEITPLFLRFSTVAGEAGAADAE
                     RDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWD
                     FWSLCPESLHQVTILMSDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTQQGI
                     KNLTNQEAAELIAKDRESHQRDLYNAIENKDFPKWKVQVQILAEKDIEKLGFNPFDLT
                     KIWPHSLVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSY
                     PDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDK
                     SYLEPDLVLEGVAQRYAPLDNDFYTQPRALFNLMNDDQKTQLFHNIAASMEGVDEKII
                     TRALEHFEKISPDYAKGIKKALEK"
     gene            1498..1968
                     /locus_tag="RJ336_001648"
     CDS             1498..1968
                     /locus_tag="RJ336_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj1386 family hemin-binding protein"
                     /protein_id="HDZ5214077.1"
                     /translation="MTTLSLEEEKRFEELCKMAFNFARNNECENLKIMIEAGLNANLK
                     THKGDSLLMLAAYNNSYESAKMLLEKGAKVDEKNDRGQTPLAGVCFKGYLPMCELLVK
                     YGANIDENNGLGMTPYTFAIMFGRKDVAEFLLKKSKNNFLKKTSLKILKFIKKF"
     gene            complement(1969..2625)
                     /locus_tag="RJ336_001649"
     CDS             complement(1969..2625)
                     /locus_tag="RJ336_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDZ5214078.1"
                     /translation="MDEGQKQQFIKLTYFLGEVLGEQYEIVFHVITEDGAYIAAIANN
                     HISGRSLDSPLTAFASELMQNKKYLEKDFLCDYKALVGKSKLIRGSTFFIKNHDKLVG
                     ILCINHDTSIMRDLICKMIDLEKIGDMGDILGNISFSQNDSSIETLSHSIEDILVQSV
                     DSSYLNSNYQLSITQKEEIAEKLYEKGIFNIKGAVPIVAKFLKISEPSVYRYLKKFKK
                     "
BASE COUNT          979 a          410 c          404 g          838 t
ORIGIN      
        1 tatttaggag aaaacaatga aaaaattaac taacgatttt ggaaacatta tagccgataa
       61 ccaaaattca ttaagtgcag gcgcaaaagg acctttgctt atgcaagatt atcttttgct
      121 tgaaaaactt gctcatcaaa atagagaaag aattccagaa agaaccgttc atgccaaggg
      181 aagtggggct tatggagaaa taaaaatcac cgctgattta tctgcttata ctaaggcaaa
      241 aatatttcaa aaaggagaaa taactcctct tttcctacgc ttttctactg ttgcaggtga
      301 agcaggtgca gcagatgctg aacgcgatgt gagaggtttt gctattaaat tttacaccaa
      361 agaaggaaac tgggacttgg taggaaataa cactccgaca ttcttcatcc gtgatgctta
      421 taaattccct gatttcatcc atactcaaaa aagagatcca agaacacatt taagaagcaa
      481 taatgctgct tgggattttt ggagtttatg tcctgaaagt ttacatcaag taaccattct
      541 tatgagcgat agaggaattc ctgcaagtta tcgtcatatg catggatttg gaagccatac
      601 ttatagtttt attaatgata aaaatgaaag attttgggtg aaattccatt ttaaaaccca
      661 acaagggatt aaaaatctta ccaaccaaga agctgccgag cttatagcaa aagatagaga
      721 aagtcatcaa agagatctct ataatgctat agaaaataaa gattttccaa aatggaaagt
      781 tcaagttcaa attcttgctg aaaaagatat agaaaaactt ggatttaatc cttttgattt
      841 aacaaaaatt tggcctcata gtcttgtgcc tttgatggat ataggcgaaa tgattctaaa
      901 caaaaatcct caaaattatt ttaatgaagt tgaacaagct gcctttagtc caagcaatat
      961 cgttcctgga attggcttta gccctgataa aatgttgcaa gctagaattt tttcatatcc
     1021 tgatgcacaa agatatagaa taggaactaa ttatcatctt ttgcccgtaa atcgtgcaaa
     1081 aagcgaagtg aatacttaca atgtcgctgg tgctatgaat tttgatagtt ataaaaatga
     1141 tgcagcttat tatgaaccaa acagctatga taatagccca aaagaagaca aaagctatct
     1201 tgaacctgat ttagtcttag aaggcgtagc acaaagatat gctccactag ataatgactt
     1261 ttatactcaa ccaagagctt tatttaatct tatgaatgat gatcaaaaaa ctcaactttt
     1321 tcataatatc gccgcttcta tggagggagt tgatgaaaaa attatcacta gagctttaga
     1381 acattttgaa aaaatttcac ctgattatgc aaaaggaatt aaaaaagctt tagaaaaata
     1441 atttttactt gccacttttg gtggcaaact aaagattata ataattaagg aaaaacaatg
     1501 acaactctta gtttagaaga agaaaaaaga tttgaagagc tttgcaaaat ggcttttaat
     1561 tttgcaagaa ataatgaatg tgaaaatctt aaaatcatga tagaagcagg tttaaatgca
     1621 aatttaaaaa ctcataaagg cgatagcttg cttatgcttg cagcttataa taattcttat
     1681 gaaagcgcta aaatgctttt agaaaaaggt gcaaaagtag atgaaaaaaa cgatcgtgga
     1741 caaaccccat tagcgggagt ttgttttaaa ggatacttac ctatgtgtga acttttagtt
     1801 aaatatggag caaatattga tgaaaacaat ggtttaggaa tgacacctta tacttttgct
     1861 attatgtttg gacgcaaaga tgtggcagaa tttttactca aaaaatctaa aaataatttt
     1921 ttaaagaaaa cgagcctaaa aatactaaaa tttatcaaaa aattttagtt attttttaaa
     1981 tttcttcaga tacctataaa cactaggttc tgaaattttt aaaaattttg ctacgatagg
     2041 aaccgctcct tttatattaa aaataccttt ttcatatagc ttttcagcaa tttcttcttt
     2101 ttgagtaatg cttaattgat aattagaatt taaataacta gaatctacac tttgaactaa
     2161 aatatcctct atcgagtgac ttaatgtttc tatgcttgaa tcattttgag aaaaactaat
     2221 atttcctaaa atatcaccca tatctccaat tttttctaaa tcaatcatct tgcatattaa
     2281 atctctcata atgctagtat catgattgat acacaaaata cctactaatt tgtcatgatt
     2341 tttaataaaa aaagtagatc ctctaattaa ttttgatttt ccaacaagag ccttataatc
     2401 acataaaaaa tctttttcta aatatttttt attttgcata agctcacttg caaaagcagt
     2461 caagggagaa tctaaacttc tcccactaat gtgattgtta gcaattgccg caatataagc
     2521 cccatcttca gtaattacat gaaaaactat ctcatattgc tcacctaaaa cttctcctaa
     2581 aaaatatgtc aactttataa attgttgttt ttgtccctca tccataaaac t
//
LOCUS       DAPWGO010000120         2591 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.122, whole genome shotgun sequence.
ACCESSION   DAPWGO010000120 DAPWGO010000000
VERSION     DAPWGO010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.122"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..256
                     /locus_tag="RJ336_001650"
     CDS             <1..256
                     /locus_tag="RJ336_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002912325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FdtA/QdtA family cupin domain-containing
                     protein"
                     /protein_id="HDZ5214079.1"
                     /translation="EILIDDGQTKQKIILNDKTKGLYIDKMIWKQMYNFSKDCILLVL
                     TNTYYDEKEYIYDYKYFCELKNNIGRRGGVCYKNHALKVA"
     gene            253..657
                     /locus_tag="RJ336_001651"
     CDS             253..657
                     /locus_tag="RJ336_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WxcM-like domain-containing protein"
                     /protein_id="HDZ5214080.1"
                     /translation="MKNYKILKLDAIKDDRGKLVALESNKEIPFEIKRVYYIFDTDPN
                     FPRGAHAHKNLEQVLIMMSGSCDIILNDGKNCEKICLNRPDMGLYIGKNMWREMKNFS
                     YGAKLLVLASDFYDEKEYIRNYDEFLRNINDT"
     gene            647..1090
                     /locus_tag="RJ336_001652"
     CDS             647..1090
                     /locus_tag="RJ336_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDZ5214081.1"
                     /translation="MIHKMSDVQSSNIGKNTNIWQFCVVLPNAKIGDNCNICSHCFIE
                     NDVVIGDDVTIKCGVQIWDGITIEDNVFIGPNVTFCNDKYPKSKQYPKEFLKTIIKKG
                     ASIGANATILPGVIIGENAVIGGGAIVTKDIAANTTYYCKIISKQ"
     gene            1112..1639
                     /locus_tag="RJ336_001653"
     CDS             1112..1639
                     /locus_tag="RJ336_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDZ5214082.1"
                     /translation="MSDFCIIGKNINMYLVDDEDAGFIFELRSDVVKNKFLNKIDNDI
                     KKQREWIRLYKKREKNKKEFYFTIRNKNNEKLGLVRLYDFIDDSFCWGSFIIKHGVAF
                     YISIEVVMNVYEFAFYNLGFNASHFDVRKDNDRVIAFHKKFGAKIIKEDIDNFYFNIS
                     KQEYEIAKEKYKKYL"
     gene            1936..>2591
                     /locus_tag="RJ336_001654"
     CDS             1936..>2591
                     /locus_tag="RJ336_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDZ5214083.1"
                     /translation="MAKISILTPCFNHEKYVSYFLQSVLEQSFSDFELIIVDDCSSDN
                     STKEIQKFKDPKIKLIKHEFNKGINATLNTAFENSNGEYIVFCASDDILEKNALEIIY
                     KTFKDNDIIAVYPNLICIDENNEILGNLYPLKQRNKVELLYYLFMRYNCLTSVGLSLK
                     RDVFEKLYPLPNSMCNYQDMKMHIDILNIGEIKILETQLIRYRRTRDKTNISAHNSIT
                     T"
BASE COUNT         1094 a          229 c          412 g          856 t
ORIGIN      
        1 cgaaatttta atagacgatg gacaaacaaa acaaaaaata atattaaatg ataaaaccaa
       61 aggcttatat atagataaaa tgatatggaa acaaatgtat aatttttcta aagattgtat
      121 tttattggta ttaacaaata cttattatga tgaaaaagag tatatttatg attataagta
      181 tttttgtgaa ttaaaaaata atatagggcg gcgggggggg gtatgctata aaaatcatgc
      241 cttaaaagtg gcatgaaaaa ttataaaatt ttaaagttag atgccataaa agatgataga
      301 ggtaaattag tagctttaga aagcaataaa gaaattccat ttgagataaa aagggtgtat
      361 tatatatttg atacagatcc aaattttcca agaggagcac atgcacataa aaatttagag
      421 caagtgctta taatgatgag tggttcttgt gatataatac taaatgatgg aaaaaattgt
      481 gaaaaaattt gtttaaatcg tcctgatatg ggtctttata taggtaaaaa tatgtggaga
      541 gaaatgaaaa atttttctta tggagcaaaa ttgctagttt tggcaagtga tttttatgat
      601 gaaaaagagt atataagaaa ttatgatgaa tttttaagga atattaatga tacataaaat
      661 gtcagatgta caaagtagta atataggtaa aaatacaaat atatggcaat tttgcgtagt
      721 tttacctaat gctaaaatag gagataattg caatatatgt tctcattgct ttatagaaaa
      781 tgatgttgtg attggagatg atgttacgat taagtgcggg gttcaaatat gggatggtat
      841 aacaatagaa gataatgttt ttatagggcc aaatgtaaca ttttgcaatg ataaatatcc
      901 aaaatcaaaa caatatccaa aagaattttt aaaaactata attaaaaaag gcgcgagtat
      961 tggtgctaat gcgacaattt taccaggtgt aattatagga gaaaatgcag tgataggggg
     1021 gggggctatc gttacaaaag atattgcagc caatacaact tattattgca aaattatttc
     1081 aaaacaataa ttttttacaa ggattatgca aatgagtgat ttttgcataa ttggaaaaaa
     1141 tattaatatg tatttagttg atgacgaaga tgctggattt atttttgaac tcagaagtga
     1201 tgttgtaaaa aataaatttt taaacaaaat agataatgat ataaaaaagc aaagagaatg
     1261 gattagatta tataagaaga gagaaaaaaa taaaaaagaa ttttatttta caatcagaaa
     1321 taaaaataat gaaaagttag gcctagttag attgtatgac tttattgacg attctttttg
     1381 ctggggaagt tttataataa aacatggggt tgccttttat atatccatag aggttgttat
     1441 gaatgtgtat gaattcgcat tttataattt aggttttaat gctagtcatt ttgatgtaag
     1501 aaaagataac gatagagtta tagcctttca taaaaaattt ggtgctaaaa ttattaaaga
     1561 agatattgat aatttttatt ttaacatttc aaaacaagaa tatgaaattg caaaagaaaa
     1621 atataagaaa tatctataaa tagtctaaaa tattattaaa atcatttttc aaaaaaagat
     1681 ataaaccttg atcatagaaa ttaattttaa aaaacaagtt ttgaaacaca taattaaatt
     1741 cgagcattta tttttcaaga atatcaactt cccattatca ataatagtaa aattattaaa
     1801 tctattttag taaacgaatt tataggatat aatgtctttc aagaatttga aaactatttt
     1861 ataatttcag gtattgatgg atttaaaatt atcgctcaaa aattaaataa gttataatat
     1921 tacaaggata aagtaatggc aaaaatttcc attctaaccc catgttttaa tcatgaaaaa
     1981 tatgtgagtt attttttaca aagtgtttta gagcaaagtt ttagtgattt tgagctcatt
     2041 atagtagatg attgttcaag tgataatagc acaaaagaaa ttcaaaaatt taaagatcca
     2101 aaaataaaac ttataaaaca tgaatttaac aaaggtataa atgcgacatt aaatacagct
     2161 tttgaaaact caaatggaga atacatagta ttttgcgcaa gtgatgatat attagaaaaa
     2221 aatgctttag aaattatcta taaaacattt aaagataatg atattatagc tgtatatcca
     2281 aatttgattt gtatagatga aaataatgaa attttaggga acttatatcc attaaaacaa
     2341 agaaataagg tagaattatt atattattta tttatgcgat acaactgctt aacatcagtt
     2401 ggattatctt taaaaagaga tgtttttgaa aaattatatc ctttaccaaa ttcaatgtgc
     2461 aactatcaag atatgaagat gcatattgat atattaaata ttggcgaaat taaaatactt
     2521 gaaacacaac ttataagata cagaagaact agagacaaaa caaatataag tgctcataat
     2581 agcatcacaa c
//
LOCUS       DAPWGO010000121         2531 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.123, whole genome shotgun sequence.
ACCESSION   DAPWGO010000121 DAPWGO010000000
VERSION     DAPWGO010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.123"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            88..438
                     /locus_tag="RJ336_001655"
     CDS             88..438
                     /locus_tag="RJ336_001655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214084.1"
                     /translation="MIHLIKEILKALVDKIDVILGASLTLAGFLITALTIIITIMPNY
                     AENSLKQEFFNDFKIAIRFSIICALFAFLCLVLKRQESVSYILAFIDGVLFLITLWTT
                     YKSVKSLFFIAENK"
     gene            435..1097
                     /locus_tag="RJ336_001656"
     CDS             435..1097
                     /locus_tag="RJ336_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HDZ5214085.1"
                     /translation="MKKLILLPLLSTLAFADYTQYKPSEDFAKYLTKQNCSQVLDKFY
                     YLNCYDYNLKGTKAVAYKLEAENLKGEQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYD
                     RGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQAALKLGSLEVL
                     NLVNYDNNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHEVEVESIKNYKVNCDILT
                     GS"
     gene            1163..1666
                     /locus_tag="RJ336_001657"
     CDS             1163..1666
                     /locus_tag="RJ336_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002923453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SocA family protein"
                     /protein_id="HDZ5214086.1"
                     /translation="MKKIENIIIYIINYFQTNYAPADLGKVKLNKILWFADRAFMYKN
                     YASLTQTSYIKNPQGPVVKKLENILTSLEKNEFIKSIKVNKGEYQQQSFLCLKEPNLD
                     DFTAKEISILDETINKFALKTAKELSEMSHDECWEKTKNGDTMPIESVFLQDIIPATK
                     EDINGLH"
     gene            1653..1928
                     /locus_tag="RJ336_001658"
     CDS             1653..1928
                     /locus_tag="RJ336_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214087.1"
                     /translation="MACIENAYDLCKHFNISEDCEIKIHNFFNTHKDNFLKPCTGIFY
                     GIKQQNKIILERENEYPPGIFCVKTNYLKIVYKKENLEIINIDWINS"
     gene            complement(1973..>2531)
                     /locus_tag="RJ336_001659"
     CDS             complement(1973..>2531)
                     /locus_tag="RJ336_001659"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214088.1"
                     /translation="NKIPQIIGDLIEGETKHLLLAGNNIVELKSKNDYMENFERTWDR
                     LNIWWRYDKVEAFFEACFATFIYLIALTVLQFILIKTTNPFHLIFEFKKMFIVSILVY
                     SILIGYGLVTYVNAEYVTLKPVSDNLELGYVPSNFIEVSDLEIFIKYVLFFSPFVLSL
                     FFSIWLYKYKKPKKSLKTFLENWKD"
BASE COUNT         1024 a          333 c          333 g          841 t
ORIGIN      
        1 atttagaaag tattggagaa aaacttatag aaacgttaca aaaaaataaa aataatttag
       61 ataatatttt aaagaaatga ttggaatatg atacacttaa ttaaagagat tttaaaagct
      121 ttagttgata aaatcgatgt tatcttagga gcttccttaa cattagctgg atttttaatt
      181 accgcactaa ctattattat aactataatg ccaaattatg ctgaaaattc tttaaaacaa
      241 gaattcttta atgattttaa aatagcaata agattttcta taatatgtgc tttatttgct
      301 tttttgtgtt tagttttaaa aagacaagaa agtgtttctt atattttagc ttttatagat
      361 ggggttttat ttttaattac actttggact acttataaat cagttaagag tttatttttt
      421 atagctgaaa acaaatgaaa aaactcatac ttttaccatt gttatccact ctagcctttg
      481 ctgattatac acaatacaag ccaagcgaag attttgctaa gtatttgact aagcaaaact
      541 gctcacaagt tttagataag ttttattatc taaattgtta tgattataat cttaaaggca
      601 ctaaagctgt agcttataaa ctagaagcgg aaaatttaaa aggcgaacaa atcaaaaaac
      661 gcccacgctt tgaagatgat acaaatatac ctaaaaaata ccgcaccaca tggagtgatt
      721 ataaaaacag cggttatgat agagggcaca ctctttctaa tgcttcaatg agaaaaacaa
      781 ctcaagccca aagaagcact tttttaatga gtaatattac tccgcaaaat ccacaaatta
      841 atcaaaaagt atggaataag attgaaaaaa gagaaagaca agcagctttg aagcttggaa
      901 gtttagaggt tttgaattta gttaattatg acaataatcc acaaagaata agaaatcaaa
      961 ttgccattcc aagctcttac actaagattt taaaaggcga gaattttaaa gaatgttatc
     1021 aagtgccaaa tcatgaagta gaagttgaga gtataaaaaa ttataaggtt aattgtgata
     1081 ttttaaccgg cagttgacaa tcttaaacga ttttttagtt taagtatatt atgcttttat
     1141 aaattttaga aaggagtata agatgaaaaa aatagaaaat ataattattt atatcataaa
     1201 ttactttcaa acgaactatg ctccagctga tcttggaaaa gtaaaattaa ataaaatttt
     1261 atggtttgca gacagagcct ttatgtataa aaattacgca tctctaactc aaacatctta
     1321 tataaaaaat ccacaaggac cggtagttaa aaaattagaa aacattttaa ctagtttaga
     1381 aaaaaatgag tttatcaaaa gcataaaagt aaataaaggc gaatatcaac aacaatcttt
     1441 cttgtgttta aaagagccta atttagatga ttttactgca aaagaaataa gtattttaga
     1501 cgaaactatc aataaattcg ccttaaaaac agcaaaagag ctttcagaaa tgtctcatga
     1561 tgaatgctgg gaaaaaacaa aaaacggcga tactatgcct attgaaagcg tatttttaca
     1621 agatattata ccagctacga aagaagatat aaatggcttg cattgaaaat gcttatgatt
     1681 tatgtaagca ttttaatata agtgaagatt gtgaaataaa aattcacaat ttttttaata
     1741 ctcataagga taatttttta aaaccctgta ctggtatttt ttacgggata aaacaacaaa
     1801 ataaaataat attagaacgt gaaaacgaat atcctccagg gattttttgt gtaaagacga
     1861 attatttgaa aattgtttat aaaaaagaaa atcttgaaat aattaatata gactggataa
     1921 attcataaat cttaacctct caatacccca tcaacctttt atatccatcg cattaatcct
     1981 tccaattttc taaaaatgtt tttaaggatt tttttggttt tttatactta tataaccaaa
     2041 tgctaaaaaa taagcttaaa acaaatggtg aaaagaataa tacatattta ataaaaatct
     2101 ctaaatcact tacttctata aaattactag gcacataacc taattctaaa ttatcgctaa
     2161 cgggtttaag tgttacatat tctgcattta cataagttac taatccatag ccaattaata
     2221 tagagtaaac taaaattgat acaataaaca tttttttaaa ttcaaaaatt aaatggaatg
     2281 gatttgtggt tttaattaaa ataaattgca aaacagtcaa agcaatcaaa taaataaatg
     2341 ttgcaaaaca tgcttcaaaa aaagcttcaa ctttatcata tctccaccaa atattaagtc
     2401 tatcccatgt tctctcaaaa ttttccatgt agtcattttt tgactttaat tcaacaatat
     2461 tattaccagc taatagaaga tgtttggttt caccttctat taaatctcct ataatctgtg
     2521 gtattttatt t
//
LOCUS       DAPWGO010000122         2407 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.124, whole genome shotgun sequence.
ACCESSION   DAPWGO010000122 DAPWGO010000000
VERSION     DAPWGO010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.124"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..468)
                     /locus_tag="RJ336_001660"
     CDS             complement(<1..468)
                     /locus_tag="RJ336_001660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214089.1"
                     /translation="MQSIIVKVCKIPIFKTISDDNLKKYYLLGVLFLRIQIFKKSKKY
                     SLFGLPILKLFYSDNISKFCNINQQQQTMEKLIGQLNKNDIVKESDFAFLKSRKTNKE
                     KSAVFGVLPPEKTGIAIFNHNAFVDCDYFDMFSDIRDLSVARGLSKNVFDLKTF"
     gene            complement(504..1847)
                     /locus_tag="RJ336_001661"
     CDS             complement(504..1847)
                     /locus_tag="RJ336_001661"
                     /inference="COORDINATES: protein motif:HMM:NF012744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDZ5214090.1"
                     /translation="MFIIYDFTRLDQRQNLPTPSGVDRVDLYYILFLLKTYSKIIFVR
                     GYGGYLKTYPTQSALDVLRKIAKNWAEIDNISYNIDKNDFINTKIDAERILKNNIQYT
                     YFNLTHSLLIGRYTIAKFAVKDNIKMIYFCHDMTPITHPEYHAEGMISFKQHSCVMKL
                     MLWSADLILTTSQAVQQDVLNYSKEIGVNPPKVVAKEIGAEENFLKARWSKQDSHKHF
                     IYVGTFEPRKNHILLFLAWKKLYSILQENTPMLYIIGRKGWLIDWLDRYFEVEPNVSR
                     FVKRLENIQDSQLEKLMLESYATLNPSYTEGWGMPVAESVSMGVPTICSDIPAYHESS
                     QECAIFLSPLNVDVWVDTILDVLSDRVIFPDYVYKIPTWKEYFAEIDEILNKDFFLRD
                     KKQYIQVFYNSLEDFHFAAHKIQPNQKVKKSIKYKMRLKLLRSKFYFVRFFGQFF"
     gene            complement(1850..>2407)
                     /locus_tag="RJ336_001662"
     CDS             complement(1850..>2407)
                     /locus_tag="RJ336_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HDZ5214091.1"
                     /translation="FKNNFILEDEFKAQNKCFFACRENFRENIYNAISSLEENSPFAN
                     ILTPINTVLSISTSKNIRSVGLSKRETHGRWSLGDEVSFYFNFTEYKRIIIDFKLHAI
                     TDLDTAVYLDSKKMLSCNIFKVVNQNKISIVVSRKKLLKQNGCIMIKFIIRFPISPKM
                     LKLNQDSRMLGIFFHSIDIHEVKKG"
BASE COUNT          873 a          379 c          247 g          908 t
ORIGIN      
        1 aaaggttttt aaatcaaaaa catttttaga taatcctcta gctacactca aatcacgaat
       61 atcggaaaac atatcaaaat agtcacaatc aacaaaggca ttgtgattaa aaatagctat
      121 tcccgttttt tctggcggta aaacaccaaa aacggcactc ttttctttat ttgtttttct
      181 agattttaaa aaagcaaaat cactctcttt aactatatca tttttattta attgccctat
      241 caacttttcc attgtttgct gttgttgatt tatattgcaa aattttgaaa tattatcact
      301 ataaaataat tttaaaattg gcaaaccaaa taaagaatat tttttgcttt tcttaaaaat
      361 ttgaattctt aaaaataaaa cacccaataa ataatatttt ttcaaattat catcacttat
      421 tgttttaaaa ataggaattt tacatacctt tacaattata ctttgcatat tttaactatc
      481 cctcctcttt ttgattttta aagttaaaaa aattgtccaa aaaacctaac aaaataaaat
      541 tttgacctta agagttttaa tctcatttta tatttaatgc tttttttaac tttttgatta
      601 ggttgtattt tatgtgctgc aaaatgaaaa tcttctaaac tattgtaaaa aacttgtata
      661 tattgttttt tatctcttaa aaagaaatcc ttatttaaaa tctcatctat ttcagcaaaa
      721 tattctttcc aagtaggaat tttataaaca taatcaggaa aaatcaccct atcacttaga
      781 acatctaaaa tagtatcaac ccaaacatct acattaagtg gagataaaaa tatagcacat
      841 tcctgagaac tctcatgata agctggtata tcagaacata tagttggtac acccatagat
      901 acagattcag ctacaggcat accccaacct tcagtatatg atggatttaa tgtagcatat
      961 gattcaagca ttaatttttc taattgtgaa tcttgaatat tttctaatct ttttacaaat
     1021 cttgaaacat taggttcaac ttcaaaatat ctatcaagcc agtcgatcaa ccaccctttt
     1081 cttcctataa tgtaaagcat gggcgtgttt tcttgtaaaa tagaatataa ttttttccat
     1141 gctaaaaata ataatatatg attttttctt ggctcaaaag tcccaacata aataaaatgt
     1201 ttatgagaat cttgcttact ccatcttgct ttaagaaaat tttcttcagc acctatttct
     1261 ttcgcaacaa cttttggagg attgacacct atttcttttg aataattcaa aacatcttgt
     1321 tgtactgctt gagaagtagt aagaattaaa tccgcactcc aaagcattaa tttcatcaca
     1381 caactatgct gtttaaaaga aatcattccc tctgcatgat actctggatg tgtaattggc
     1441 gtcatatcat gacaaaaata aatcatttta atattatctt ttacggcaaa tttagctata
     1501 gtatatcttc ctattaaaag actatgagta agattaaaat aagtatattg tatattattt
     1561 ttcaaaattc tttctgcatc tatttttgta ttaataaaat catttttatc aatattataa
     1621 gaaatattat caatctctgc ccaatttttc gctatctttc ttagtacatc taaagcactt
     1681 tgtgttggat atgtttttaa gtagccacca taaccacgaa caaaaataat cttgctatag
     1741 gtttttaata aaaacaatat ataatataaa tcaaccctat ctacaccaga aggtgtaggc
     1801 aaattctgtc tttgatctaa acgagtaaaa tcatatataa taaacatttc taaccttttt
     1861 ttacctcatg aatatctata gaatgaaaaa atattcctaa cattcttgaa tcttgattta
     1921 actttaacat ttttggacta ataggaaaac gaatgatgaa ttttatcatg atacaaccat
     1981 tttgttttaa taattttttt ctgctaacaa caatagaaat tttattttga ttaactacct
     2041 tgaaaatatt acacgaaagc atctttttag aatccaaata aacagctgta tctaaatctg
     2101 taatagcatg gagtttaaaa tcaataataa ttcttttgta ttcagtgaaa ttaaaataaa
     2161 aagatacctc atcgcctaaa ctccatcttc catgtgtttc tcttttagat aaacctacac
     2221 ttctaatatt ttttgatgtt gatatagata aaaccgtatt aattggtgtt aaaatatttg
     2281 caaatggact attttcttct aatgagctaa tagcattata aatattttct ctaaaattct
     2341 ccctacaagc aaaaaaacat ttattttgtg ctttaaattc atcttctaag ataaaattat
     2401 ttttaaa
//
LOCUS       DAPWGO010000123         2232 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.125, whole genome shotgun sequence.
ACCESSION   DAPWGO010000123 DAPWGO010000000
VERSION     DAPWGO010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.125"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..493)
                     /locus_tag="RJ336_001663"
     CDS             complement(<1..493)
                     /locus_tag="RJ336_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214092.1"
                     /translation="MILNFIASFDVALGRKSLRERKGYLKLSNTIAYGGLSVDALALY
                     IQLAKLSEKTIVSEIYLREFIKVKNNQRISLNRLRIAKKELIELRLLEIKKVRNGSLN
                     FYEWILKDENYQVKKHFNKSLSLLKNSDEKLSKTLKNNTSSIDRKLTTENEKKENLHY
                     IETH"
     gene            536..901
                     /locus_tag="RJ336_001664"
     CDS             536..901
                     /locus_tag="RJ336_001664"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214093.1"
                     /translation="MFNSFLSEMLKTATLENLLYFLIGVLFGLSIRPLFLYLTKKQKL
                     KRVCIKDMKLENDLTKRLYPNLGYKLVTKKTPFEMVFKKDKFKYIICPHYRDKKCVLD
                     NDKCKILKSQPKYQPLETV"
     gene            1393..2127
                     /locus_tag="RJ336_001665"
     CDS             1393..2127
                     /locus_tag="RJ336_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HDZ5214094.1"
                     /translation="MGRNGDIFDFHFDTEKFKFYLKNRDKKVTYQDLMEILYKNGIES
                     SEATIKKWLMSKEDNKTKPKPQYIKILCNALNIPFNEVIFQDVFRNDNQINFRYFPDI
                     YASAGLGTSSQSEEVKIVSVDENFLKEILDIPIKKSYDIIKINGDSMEPILSNGDFII
                     VDRSKNSLQTISNADIVIFRKNDDLFCKKIKKEPFEDYIFLVSENKKYEDKKVDNSEF
                     EQCEILGAVVSKMAIETFKNFIEVVG"
BASE COUNT          868 a          284 c          275 g          805 t
ORIGIN      
        1 tgtgtgtttc tatataatgc aaattctctt ttttttcgtt ttcagtggtt aattttctgt
       61 cgattgatga agtgttattt ttaagagttt tgcttagctt ttcatcactg tttttaagca
      121 aagataaaga tttgttaaaa tgctttttaa cttgataatt ttcatctttt aaaatccatt
      181 cataaaaatt taaagatcca tttctaacct ttttaatttc taaaagtctg agttcaatta
      241 attctttttt agcaattctt agtctattta aactaattct ttgattattt ttaactttta
      301 taaactctct taaatagatt tcacttacaa tcgttttttc actaagcttt gctaattgaa
      361 tatacaatgc taaagcatca acactaagac caccataagc tatagtgttt gataatttca
      421 aatagccttt tctctctctt aggcttttac gccccaaagc tacatcaaaa cttgctataa
      481 aatttagtat caccaactct cctttatgtt ataatttaaa ttaaaaaggt tttttatgtt
      541 taattctttc ttatccgaaa tgctaaaaac cgccacttta gaaaatttgt tatatttttt
      601 aataggtgtt ttatttggtt taagtatccg tcctttgttt ttatatttaa ctaaaaaaca
      661 aaaactaaaa agagtttgta ttaaagatat gaagctagaa aacgatttga caaaaagact
      721 atatcctaac ttaggatata aattagttac aaaaaaaact ccttttgaaa tggtttttaa
      781 aaaagataaa tttaaataca ttatttgtcc tcactaccgt gataaaaaat gcgttttaga
      841 taatgataaa tgcaagatat taaaatccca gccgaaatac cagccactag aaacagtcta
      901 aaatgcaaca tcatcaaagt aaaaataaat aatcctatta tttcaaatac cctatcaagc
      961 attaatcatc ctaaaagatt ttccaaatta aaaaataaac taaaaaaacc tattgaaaat
     1021 ctcgctataa aagccatttt ttaaccttta gctcaatcac tttcattctc tatcctttcg
     1081 ctttctccca cgcttaggta tgtttataag attgctacga acatccaccc aaaattcatg
     1141 aggtattccg tagagttttt taaactctat ttgttttttg aaacttgggc gtgatttatt
     1201 tgttctaatc tttttaacac taataaccgt atagtgatta ctcaatattt ttgtaaaatc
     1261 aaaaaaatct atttttttca taacgaaagt ataaaataaa gaaacttaat aaatatttaa
     1321 ttatgtttct aattatggaa cattatttgc ttgaaaaaag tgtataattt ttatactaaa
     1381 aaaggagaga atatgggaag aaatggagat atattcgatt ttcattttga tactgaaaaa
     1441 tttaaatttt atttaaaaaa tagagataaa aaagttacat atcaagattt gatggaaatt
     1501 ttatataaaa atggcataga aagctcagaa gcaacaataa aaaaatggtt gatgtctaaa
     1561 gaagataata aaacaaaacc taaaccacaa tatataaaaa ttttatgcaa tgcattaaat
     1621 attcccttta acgaagtgat atttcaagat gtttttagaa atgataatca aataaatttc
     1681 agatattttc cagatattta tgcaagtgca ggacttggaa cctcatctca aagtgaagaa
     1741 gttaaaatag tttccgttga tgaaaatttt ctaaaagaaa ttttagatat acctataaag
     1801 aagagttatg atattataaa aattaatggc gatagcatgg aacctatttt atctaatgga
     1861 gattttatta ttgtggatag aagcaaaaat tcacttcaaa ctatttcaaa tgcagatatt
     1921 gttattttta gaaaaaacga tgatttattt tgcaaaaaaa ttaaaaaaga accttttgaa
     1981 gattatattt ttttagtttc tgaaaataaa aaatacgagg ataaaaaagt agataatagc
     2041 gaatttgaac aatgcgagat cttaggtgct gtagtatcaa aaatggcgat tgaaaccttt
     2101 aaaaatttta tagaagtggt gggatgagag taaatatgaa aaaagaagaa aaaataaaac
     2161 gaaaagaata taatgtattt ttttacaagc taagcgtaaa acccaattta tttaatcaag
     2221 aaaatgaaat tt
//
LOCUS       DAPWGO010000124         2212 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.126, whole genome shotgun sequence.
ACCESSION   DAPWGO010000124 DAPWGO010000000
VERSION     DAPWGO010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.126"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            39..302
                     /gene="rpsT"
                     /locus_tag="RJ336_001666"
     CDS             39..302
                     /gene="rpsT"
                     /locus_tag="RJ336_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDZ5214095.1"
                     /translation="MANHKSAEKRARQTIKKTERNRFYRTRLKNITKAVREAAANGDK
                     NAANEALKVANKSIHAMVSRGFIKKQTASRRVSRLALLVNKIA"
     gene            321..1388
                     /gene="prfA"
                     /locus_tag="RJ336_001667"
     CDS             321..1388
                     /gene="prfA"
                     /locus_tag="RJ336_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDZ5214096.1"
                     /translation="MLASKLDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEP
                     IVLKAKEYLKTLDNIEENKALLNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDP
                     NDERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEII
                     MLVKGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDL
                     KVDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYE
                     MQESERLAKESEARKSQVGSGDRSERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLF
                     DEIIEPLITHHQAQALQEQNL"
     gene            complement(1402..2157)
                     /locus_tag="RJ336_001668"
     CDS             complement(1402..2157)
                     /locus_tag="RJ336_001668"
                     /EC_number="1.14.14.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HugZ family heme oxygenase"
                     /protein_id="HDZ5214097.1"
                     /translation="MNFESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGL
                     DLVYNDKENLRVEFPKKADENTIKDTIISLCMSAKSEQNFSGVEKELNEFMLSFNSVA
                     LATLNANAEVVCSYAPFVSTQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAAS
                     VILRKRLRYRVNASFLERGERFDQIYDEFEKQTGGEGGIKTIRKMFDFHLVKLEFKKG
                     RFVKGFGQAYDIENGNVAHVGASGNPHKFPHKH"
BASE COUNT          814 a          375 c          342 g          681 t
ORIGIN      
        1 tataatttag tctttaattt caaaaaagga aaatataaat ggcaaaccat aaatctgctg
       61 aaaaaagagc aagacaaact attaaaaaaa cagaaagaaa tagattctat agaacaagac
      121 ttaaaaatat aactaaagcc gtaagagaag ctgcagcaaa tggagataaa aatgctgcta
      181 atgaagcttt aaaagtagct aataaaagca ttcatgctat ggtaagtcgc ggtttcatta
      241 aaaaacaaac tgcttctcgc cgtgtaagcc gcttagccct tttagtaaat aaaatcgcat
      301 aattttctat atagttttta atgttagcta gcaaactaga tcctttttta aaacgctttg
      361 aagagttaaa ttctcttctt agcagttctg atatactcaa cgatatcagt aaaatgacta
      421 cactctctaa agaacaaaaa aatttagaac ctatcgtttt aaaagctaaa gagtatttaa
      481 aaactttaga caatatagaa gaaaataaag ctttgctaaa cgatccagaa cttggggaac
      541 ttgcaaaaga agaactaaaa actttagaag aattaaaacc aaaacttgaa gaagagatta
      601 aaattttact tcttcctaaa gatcccaatg atgaaagaaa tatttttctt gaaattcgtg
      661 caggtacagg tggcgatgag gcatctttat ttgtaggaga tcttgtaaaa gcttatgcaa
      721 gatatgctga aaatcgcggc tataaacttg agattgtaag ctctagcgaa ggaagtgtag
      781 gtggatttaa agaaatcatc atgcttgtta aaggaacagg ggcttattca agacttaaat
      841 atgaaggtgg aacgcaccgt gttcaaagag ttcctcaaac agaatcccaa ggacgcgtgc
      901 atacttctgc tatcaccgtg gcagtaatgc cagaagttga tgatatagaa atcgaaatca
      961 atccaaacga tcttaaagtt gatgtgatgc gttcttctgg acatggtgga caaagtgtaa
     1021 atactactga ttcagctgtt cgtatcactc atatccctac aggtatagtt gtagtcaatc
     1081 aagatggaaa aagccaacac aaaaataaag aaagtgcgat gaaagtccta aaagcaaggc
     1141 tttatgaaat gcaagagagt gaaagactag caaaagaaag cgaagcaaga aaatcacaag
     1201 taggaagcgg agatagaagc gaacgcattc gcacttacaa ttttccacaa aatcgtatca
     1261 gcgatcatag aataaatctt actttatatc gcttagatgc cattatgcaa gatgggcttt
     1321 ttgatgaaat catagaacct ttaatcactc atcatcaagc ccaagcttta caagaacaaa
     1381 atttataaga ttttatacaa attaatgctt atgtgggaat ttatgtggat ttccactagc
     1441 acctacatgt gcaacatttc cattttctat atcataagct tgaccaaaac cttttacaaa
     1501 gcgtcctttt ttaaattcaa gctttactag atgaaaatca aacatcttgc gtatagtttt
     1561 aatgcctcct tctcctccgg tttgtttttc aaactcatca taaatttgat caaatctttc
     1621 acctctctct aaaaagcttg catttactct atagcgcaat cttttgcgaa gtataacaga
     1681 agcagcttta ctctcatcct ctaaaaacat tatttctata ttgtttggat ttactttgat
     1741 gttgttaaaa tgttcactta cttcacttat ataaatataa tttccccatt gtgtgcttac
     1801 aaaaggtgca tacgagcaaa caacttctgc atttgcattt aaagttgcca aagctacaga
     1861 attaaaactt agcataaatt catttaattc tttttctacg ccactaaaat tttgctcgct
     1921 ctttgcactc atgcaaaggg atattatagt atctttaatc gtgttttcat cggctttttt
     1981 aggaaattcc actcgtaaat tttctttatc attgtaaaca agatccaagc cattaaaatc
     2041 aacacttttt agaaaaacat cttgcacttg ctcaatacca ccaaattttt tacaaagatc
     2101 aactaaattt gatttatgat gatcattcat atgagaaata atgctttcaa aattcatttt
     2161 tatcctttct tgattttaaa ataaaatatt aaaaaaaatg gtatcaatta tc
//
LOCUS       DAPWGO010000125         2158 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.127, whole genome shotgun sequence.
ACCESSION   DAPWGO010000125 DAPWGO010000000
VERSION     DAPWGO010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.127"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..241
                     /locus_tag="RJ336_001669"
     CDS             <1..241
                     /locus_tag="RJ336_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDZ5214098.1"
                     /translation="TNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFA
                     AESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ"
     gene            complement(272..2158)
                     /locus_tag="RJ336_001670"
     CDS             complement(272..2158)
                     /locus_tag="RJ336_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ5214099.1"
                     /translation="MREENNFNKNLKALSGFEYNNLRKKLEDLKELREFTFTQGKDNL
                     NINIIKKRNLKKMYQDPIKELEKNLEYFKDFTRYPVLFFYGFGNGILYKILLQNQALK
                     RIIIFEKELELIFLALNFIDFSKDLSLGRLIILHHDDINLPKMDKVFRLIGDLFYRSY
                     NLHIANDFYEHYKEDILKLNKLNMQIIKNHNLMRGNDPKDAMQGIEQFVYNLPQMITH
                     PSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIK
                     PDYVCMLERDEIVAECFNNDFGEFDKDIIFLVASLVHKKTISYLEKNQRKYILIIKGQ
                     PFARYLELDDYGYINGGMSVSHMAYELAENLGNKNIILIGQDLAYAKDGQTHSQGFIH
                     ANLHNGDYERDLDKFSTTAYGGNGKVQSSEIWTLFRQIFENFIAFSKSKTYNCTEGGA
                     RIESAIEKPFKELCEDLLENKKDKKFKKLQVLNTKEQVKLGLKIYQKIKKNMNLSLNF
                     KKECKKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYLFLQEILGPTLHHEQS
                     ILTPLYLKDIKDESDKQNKLFAWVYAHEALMENIIELLEVQDKRLKIAILPLQDFLEK
                     KKAL"
BASE COUNT          698 a          326 c          298 g          836 t
ORIGIN      
        1 aacaaatctt gatcaaatca gagctgacat tggttcagtg caaaatcaac ttcaagtgac
       61 tataaacaac attactgtta ctcaagtaaa tgttaaagca gctgaatcaa ccataagaga
      121 tgtagacttt gcagctgaaa gtgcaaattt ttctaaatat aacatccttg cacaatcagg
      181 ttcttatgct atgagtcagg ctaatgcagt gcagcaaaat gttttaaaac ttcttcaata
      241 atttcttaga tgcttttatg catctaagct tttaaagtgc ttttttcttt tctaaaaagt
      301 cttgcaaggg caaaatcgca atcttaagtc ttttatcttg gacttctaaa agctctatga
      361 tattttccat taaagcttcg tgtgcataaa cccaagcaaa aagtttattt tgtttatcag
      421 attcatcttt gatatcttta agatataaag gcgttaatat actttgttca tgatgcaaag
      481 tagggcctaa aatttcttgc aaaaagagat attttttatt tgaaagtttt tctttgattt
      541 tgtctatatt ctggtttatt tgttcaagag agagcttgtt ttttccatgg gtaagattgt
      601 gaatttgttt ttgaactttt ttacactctt ttttaaaatt caaggataga ttcatatttt
      661 ttttgatttt ttgatagatt tttaatccga gttttacttg ttctttagta tttaaaactt
      721 gtaatttttt aaatttttta tcttttttat tttcgagtaa atcttcacaa agttctttaa
      781 aaggtttttc tatagcgctt tctatcctag cacctccttc agtgcaatta taagttttac
      841 ttttgctaaa agcaatgaaa ttttcaaaaa tttgtctaaa aagtgtccaa atttcagaac
      901 tttgaacttt tccatttcct ccataagctg tagtgctaaa tttatctaag tccctttcat
      961 agtctccatt gtgtaaatta gcatggataa aaccttgaga gtgtgtttgc ccatctttgg
     1021 cataagctaa atcctgacct atgagaatga tgtttttatt tcctaaattt tcagccagtt
     1081 cataagccat gtgagataca ctcatacctc cgttaatata tccataatcg tctagctcca
     1141 agtatctagc aaaaggctgg ccttttataa ttaaaatgta ttttctttga tttttttcaa
     1201 gataagaaat ggttttttta tgcaccaaag aagctactag aaaaatgatg tctttatcaa
     1261 attccccaaa atcattatta aaacattcag ctactatttc atcgcgttcc aacatacaaa
     1321 cataatcagg ctttatacca tgtttagcta aaataggata agaagaatcc gcacaaaaaa
     1381 ttgtagcttt gctagcatac ttttttaata aaggaagttg tttagtaaga gatggtcctg
     1441 tagaaacaat gatagctgta tcacttatac cctttctttt agaaagcaat tctttataac
     1501 taggatgggt aatcatttga ggaagattat aaacaaattg ctctatgcct tgcatggcat
     1561 ctttaggatc atttccacgc ataagattgt gatttttgat gatttgcata ttgagtttat
     1621 taagttttaa aatatcttct ttatagtgtt cataaaaatc attagcaatg tgtaggttat
     1681 aagaacgata aaacaaatcc cctatcaaac gaaaaacttt atccatttta ggaagattaa
     1741 tatcatcatg atgtaaaata atgagtcgcc ctaagcttaa atctttgcta aaatctatga
     1801 aatttaaagc caaaaagata agttctaatt ctttttcaaa gatgattatt cttttaagtg
     1861 cttgattttg aagtagaatt ttatataaaa ttccatttcc aaaaccataa aaaaaaagca
     1921 caggatagcg tgtaaaatct ttaaaatatt ctaaattttt ttcaagctct ttgatgggat
     1981 cttgatacat tttttttaaa tttctttttt ttatgatatt gatattaaga ttatcttttc
     2041 cttgagtgaa agtaaattct ctaagctctt ttagatcctc aagttttttg cgtaaattgt
     2101 tatactcaaa accgcttaaa gcttttaaat ttttgttaaa attattttct tctctcac
//
LOCUS       DAPWGO010000126         1879 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.128, whole genome shotgun sequence.
ACCESSION   DAPWGO010000126 DAPWGO010000000
VERSION     DAPWGO010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.128"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..756
                     /locus_tag="RJ336_001671"
     CDS             <1..756
                     /locus_tag="RJ336_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HDZ5214100.1"
                     /translation="FENLDRIRYTDKNGHNANLKKPDLSSIYFIVNEELSFSYFSNIN
                     LIKNKNILYVDTKSISKDNAFATIKTLAKELNFKEPNDNDEYKFKQKFWNELYYLLPY
                     RFIVNNDILIIVSDENKVFLDNDKYYKEIKDDLIDIKKELVNTKSKLFDKISINIENK
                     NWTIIKDDKALINDLREYFEKFMIILEKKANERLENMVKEEDVLNYLKEHQDLGKKIK
                     NILDYELQHIKEHRPDIINSWEYYKKFLEFFKE"
     gene            complement(783..1868)
                     /locus_tag="RJ336_001672"
     CDS             complement(783..1868)
                     /locus_tag="RJ336_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HDZ5214101.1"
                     /translation="MMFFLNLKQINDRFNTEFITKFKEILESGWYILGKQCEKFENNF
                     AKYCGVKHCIGVANGLDALRLIIKAYDFKENDEIIAPANTYIASILAITDNKCKPILI
                     EPDINTYNINPDLIEEKITKKTKAIMVVHLYGQVCDMEKIQLLANKYNLKIIEDCAQA
                     HGAIYKDKRVGNLGDAAGFSFYPGKNLGALGDAGCICTNDDNFASKIRALANYGSHKK
                     YENLYIGLNSRLDEIQAAFLDIKLKYLDEDNNKRKNIANFYLQNIKNENIILPSNKFD
                     HVWHLFVVKTKLRDELQHYLNNHDIQTIIHYPIPPHKQKCYKDLNHLQLPITENIHQE
                     VLSLPISPTMKENDFKKVADILNKWKV"
BASE COUNT          702 a          226 c          247 g          704 t
ORIGIN      
        1 tttgaaaatt tagatagaat aagatataca gataaaaatg gacataatgc taatcttaaa
       61 aaacctgatt tatcatctat ctattttatc gtaaacgaag agctaagttt tagctatttt
      121 tcaaatataa acttgattaa aaacaaaaat atattatatg tagacacgaa atcaatttca
      181 aaagataatg catttgccac tataaaaact cttgctaaag agcttaattt taaagaacca
      241 aatgataatg atgaatataa atttaagcag aaattttgga acgaattgta ttatttacta
      301 ccttatagat ttattgtcaa taatgatatt ttgataatag tatctgatga aaataaagta
      361 tttttagaca atgataagta ttataaagag ataaaagatg atttaattga tataaaaaaa
      421 gaacttgtaa atacaaaaag caagttattt gataaaattt cgattaatat agaaaataaa
      481 aattggacca ttattaaaga tgataaagct ttaatcaatg atcttagaga atattttgaa
      541 aaatttatga ttattttaga gaaaaaagcg aatgaaagac ttgaaaatat ggtaaaagaa
      601 gaagatgttt taaattattt aaaggagcat caagatttag gaaaaaaaat taaaaatatt
      661 ttggattatg aattgcaaca tataaaagag catagaccag atattattaa tagttgggaa
      721 tactataaaa aatttcttga attttttaaa gaataagcga ataaaatgga gagggcaatc
      781 tatcagactt tccatttgtt taatatatca gccacttttt taaaatcatt ttctttcatg
      841 gttggcgata taggtaatga caaaacttct tgatggatgt tttctgttat gggtagttgc
      901 aaatgattta aatctttata gcatttttgc ttatggggag ggataggata gtgtataata
      961 gtttgaatat catgattatt tagatagtgt tgtaattcat ctctaagctt tgttttgact
     1021 acaaatagat gccaaacatg atcaaattta ttactaggta atataatatt ttcatttttt
     1081 atattttgta gataaaaatt tgctatattt tttcttttat tattgtcttc atctaaatat
     1141 tttaatttta tatccaaaaa agcagcttgt atctcatcta atctagaatt taatcctata
     1201 tataaatttt catatttttt atgagagcca tagtttgcta aagctctaat tttggatgca
     1261 aaattatcat cattggtgca aatacaccca gcatccccta aagcacctaa atttttacca
     1321 gggtaaaaag aaaaaccggc agcatctccc aaatttccaa ctcgtttatc tttataaata
     1381 gcgccatgtg cttgagcaca atcttctata atttttaaat tgtatttatt agctaacaac
     1441 tgaatttttt ccatatcaca aacttgacca taaagatgaa caaccatgat agctttagtt
     1501 ttttttgtga tcttttcttc tattaaatca ggatttatgt tgtaagtatt gatatcaggc
     1561 tctattagta taggtttgca tttattatca gttatagcta aaattgatgc tatgtatgta
     1621 tttgcaggag ctatgatttc gtcattttct ttaaagtcat aagcttttat gatcaatctt
     1681 aaagcatcaa gcccatttgc aacgcctatg caatgtttaa ccccacaata ttttgcaaaa
     1741 ttattttcaa atttttcaca ttgctttcca agtatatacc aaccactttc tagaatttct
     1801 ttaaattttg ttataaattc agtgttaaac ctatcattta tttgttttaa attcaaaaaa
     1861 aacattattt ccctttatt
//
LOCUS       DAPWGO010000127         1857 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.129, whole genome shotgun sequence.
ACCESSION   DAPWGO010000127 DAPWGO010000000
VERSION     DAPWGO010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.129"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            14..586
                     /locus_tag="RJ336_001673"
     CDS             14..586
                     /locus_tag="RJ336_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HDZ5214102.1"
                     /translation="MKKVLLSSLVAVSLLSTGLFAKEYTLDKAHTDVGFKIKHLQISN
                     VKGNFKDYSAVIDFDPASAEFKKLDATIKIASVNTENQTRDNHLQQDDFFKAKKYPDM
                     TFTMKKYEKIDNEKGKMTGTLTIAGVSKDIVLDTEIGGVVKGKDGKEKIGFSLNGKIK
                     RSDFKFATSTSTITLSDDINLNIEVEANEK"
     gene            complement(591..1547)
                     /locus_tag="RJ336_001674"
     CDS             complement(591..1547)
                     /locus_tag="RJ336_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214103.1"
                     /translation="MFLLDFLISLSFIFEISALVLSFYFKNSRIFFLTLVLLGAKLPY
                     FYTSFFQANLFVALFLPMIFTLFCLGKHHALILSKKNIASITTLIFIGVLSIILPRNT
                     TFNSAGLEFHFITLNFFKPVSELGFLFFLVGLILIFIKIFKTKEYYLIIAFFAAYFQF
                     LFQEGAGIRYFEFASLVFCFYLLNHAYKLAFFDILTKLPNEKSLTRFTKGKNNYIIAL
                     LHFNELKDTKESYAKLILKQIAKILKRFRAKIFIVENDFILIFNDKNQALNHLAFLES
                     TLKNTEFNLENENFKPDFKLIWQESEENLDKNLQSLRARLLD"
     gene            complement(1608..1817)
                     /locus_tag="RJ336_001675"
     CDS             complement(1608..1817)
                     /locus_tag="RJ336_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDZ5214104.1"
                     /translation="MTKKSKRDMAYELDIDVSTLYNWRKYKPNLYRIVMLGFKFDELL
                     ENSKKTHEELLHIEQTIQDEIAKFK"
BASE COUNT          743 a          225 c          257 g          632 t
ORIGIN      
        1 aaaaaggaaa aaaatgaaaa aagttttatt aagttcattg gttgcggtgt ctttgttaag
       61 tacaggtttg tttgctaaag aatatacttt agataaagca catacagatg taggttttaa
      121 aatcaaacat ttacaaatta gcaatgtaaa aggaaatttc aaagattatt ctgcggtgat
      181 tgattttgac cctgcgagtg ctgaatttaa aaagcttgat gcaactataa aaatcgcatc
      241 tgtaaataca gaaaatcaaa caagagataa tcacttacag caagatgatt ttttcaaagc
      301 aaaaaaatat cctgatatga cttttacaat gaaaaaatat gaaaaaatcg ataatgaaaa
      361 aggtaaaatg acaggaactt taactatagc tggagtttct aaagatatcg ttttagatac
      421 tgaaatcggc ggtgtagtta aaggcaaaga tggaaaagaa aaaataggct tttctttaaa
      481 tggaaaaatc aaacgctctg attttaaatt tgcgacaagt acttcaacta ttactttaag
      541 tgatgatatt aatttaaata tcgaagttga agcaaacgaa aaataatttt ttagtctaag
      601 agtcttgctc ttagactttg taaattttta tccaaatttt cttcactttc ttgccaaatc
      661 aatttaaaat ccggtttaaa attttcattt tctaaattaa attccgtgtt tttcaaggtg
      721 gattctaaaa aagcaagatg atttaaagct tgatttttgt cattaaaaat taaaataaaa
      781 tcattttcta cgataaaaat ttttgctcta aagcgtttta aaatttttgc aatttgtttt
      841 aaaatgagtt tggcatagct ttctttagtg tcttttagtt cattaaaatg gagcaaggca
      901 atgatatagt tgttttttcc ctttgtaaag cgtgtaaggc ttttttcatt aggtagcttt
      961 gttaagatgt caaaaaaagc caatttataa gcgtgattta aaagataaaa acaaaaaact
     1021 aaacttgcaa attcaaaata ccttattcct gctccttctt gaaataaaaa ctgaaaatat
     1081 gcagcaaaaa atgcgataat aagataatat tctttagttt taaagatttt gataaaaatg
     1141 agtattaagc cgactaaaaa aaataaaaat cctaattcac tcacaggttt aaaaaaattt
     1201 aatgtaataa aatggaattc taaaccagca ctattaaaag tagtatttct aggtaaaatg
     1261 atgcttaaaa cgcctataaa aataagggtt gtaattgaag cgatattttt tttacttaaa
     1321 attaaagcat gatgttttcc aaggcaaaat agagtaaaaa tcataggtaa aaacaaagcc
     1381 acaaataaat tagcttgaaa aaaacttgta taaaaataag gcaacttagc tcctaatagc
     1441 actaaagtca aaaagaaaat tcttgaattt ttaaagtaaa aggatagcac aagtgctgaa
     1501 atttcaaaaa taaaactcaa tgatattaaa aaatctaata aaaacatttc aaatccttga
     1561 ttttaataaa agtgataatt gtatagaaaa aagcttaaaa gtggacttta tttaaattta
     1621 gcaatctcat cttgtatagt ttgttctata tgaagtaatt cttcatgagt ttttttacta
     1681 ttttctaaaa gttcatcaaa tttaaagcca agcataacaa tacgatataa attgggttta
     1741 tattttctcc aattatataa agtgctaaca tcaatgtcta gttcatatgc catatcacgc
     1801 ttgctctttt ttgtcatttt ttaccttaaa aatttagcct ttaaaaaatt ttacatt
//
LOCUS       DAPWGO010000128         1686 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.130, whole genome shotgun sequence.
ACCESSION   DAPWGO010000128 DAPWGO010000000
VERSION     DAPWGO010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1686)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1686)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1686
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.130"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..628)
                     /locus_tag="RJ336_001676"
     CDS             complement(<1..628)
                     /locus_tag="RJ336_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214105.1"
                     /translation="MKKCILFFFSLYSLSFANIYEKLNDFAYEKKPNKDFKIQEVKLV
                     QFSQENKDCLELLIEAGQVRILNSYNSCQKLSKDESFQKFLNEDFLKLYKNNGYLINE
                     NLQNLKNTMQDIMIYYKLRYSFSKDVKDMSKNKNLDILNIDEKDGGTLLYKINNQACV
                     GIELTRHDSRMAMKIYGIENLDKECKLFIQSPSFKDLSYTKKDFKWYYL"
     gene            complement(625..867)
                     /locus_tag="RJ336_001677"
     CDS             complement(625..867)
                     /locus_tag="RJ336_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214106.1"
                     /translation="MNQNNNKTLKNELEDLQYELSIVLEAMLLYAGVKREKLENAIEA
                     YIDNIDNVLENSNKEGVDEILEVVEFLKNKYKDFFQ"
     gene            complement(851..>1686)
                     /locus_tag="RJ336_001678"
     CDS             complement(851..>1686)
                     /locus_tag="RJ336_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HDZ5214107.1"
                     /translation="CEEFEKICKEKNIKIFLLDHHQSGEECAQKYSWYLLDSKRCATK
                     IVYDFFSKICTPVLELSKFVDVVNAVDIWLSEDENFELGKVFLGLIANAKEINRVMFK
                     ESQIDYMFFLLDKAWKFIGKENANILLDNATHFIKKDYFARKNDDTLSNLISYFVVEK
                     LSELKENFSIEYEGHKGILTSNIGNTSVIGNDFLVKNPDYDFFIDVSSRKTLSFRANG
                     KIDVSLMAKNLVGGGGHKNASGGLFATFKDGANYNYIKAQIIDLIKSKELKKENNESK
                     Q"
BASE COUNT          579 a          268 c          168 g          671 t
ORIGIN      
        1 ctaaataata ccacttaaaa tctttttttg tgtaggaaag atctttaaaa gaaggtgatt
       61 ggataaatag tttgcactct ttatccaaat tttctattcc gtatattttc atagccattc
      121 ttgagtcatg tcttgtaagt tctattccaa cgcaagcttg attgttgatt ttgtaaagta
      181 aagtgccacc gtctttttca tctatattta aaatatccaa attcttattt ttactcatat
      241 cttttacatc tttactaaaa gaatatcgga gtttataata tatcataata tcctgcatgg
      301 tatttttcaa attttgtaaa ttttcattaa tcaagtatcc attattttta taaagtttta
      361 aaaaatcttc attaagaaat ttttgaaaac tttcatcttt agataatttt tgacaagaat
      421 tatagctatt taaaattcta acttgaccag cttctattaa aagttcaagg caatctttat
      481 tttcttgtga aaattgcact aatttaactt cttgaatctt aaaatcttta tttggttttt
      541 tttcataagc aaaatcattt aatttttcat aaatattggc aaaacttaaa gaatataaac
      601 taaaaaaaaa taaaatacac tttttcattg aaaaaaatct ttgtatttat tttttagaaa
      661 ttccacaact tctaaaattt catcaacccc ttctttgttg gaattttcga gcacattatc
      721 tatattatca atataagctt ctattgcatt ttctaatttt tctcttttaa ctccagcgta
      781 taaaagcata gcttctaaaa ctatgctaag ctcatattgt aaatcttcta gttcattttt
      841 taaggtttta ttattgtttt gattcattgt tttccttttt aagttctttg cttttaatta
      901 aatcaataat ttgagcctta atataattat aatttgcccc atctttaaat gtcgcaaaaa
      961 gtccaccact agcattttta tgtccaccgc cacctactaa atttttagcc attaaactta
     1021 catctatttt tccatttgca cgaaaactta aggtttttct agaactaaca tcaataaaaa
     1081 agtcataatc aggatttttt actaaaaaat catttccaat aacagaagta ttgcctatat
     1141 ttgaagttaa gatgccttta tggccttcat attctatact gaaattttct tttagctcac
     1201 ttagtttttc aactacaaaa taagaaatta aattagaaag agtatcatca ttttttctgg
     1261 caaaataatc cttttttata aaatgagtag cattatcgag taaaatattt gcattttctt
     1321 ttcctataaa tttccaagcc ttatcaagca agaaaaacat ataatcgatt tgagattctt
     1381 taaacatcac acgatttatt tcttttgcat tggcaatcaa gcctaaaaaa acctttccaa
     1441 gttcaaaatt ttcatcctcg cttagccaaa tatcaacagc attaaccaca tcaacaaatt
     1501 ttgaaagctc taaaacaggg gtgcagattt tagagaaaaa atcataaacg attttagttg
     1561 cacatctttt agaatcaagt aaataccaag aatatttttg agcacattct tcgccacttt
     1621 gatgatgatc aagaagaaaa attttaatat ttttctcttt gcaaattttt tcaaattctt
     1681 cacatt
//
LOCUS       DAPWGO010000129         1533 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.131, whole genome shotgun sequence.
ACCESSION   DAPWGO010000129 DAPWGO010000000
VERSION     DAPWGO010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.131"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..397)
                     /locus_tag="RJ336_001679"
     CDS             complement(<1..397)
                     /locus_tag="RJ336_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214108.1"
                     /translation="MDYNVFLLNIQDKINQEDFFNLKLKFEQLQNKKEALSNLVFLRL
                     QDPIKPLIMSMICGFLSLGWLAIDRFMIKDYALGILRIILSLFPCVLFLILGISYEND
                     SNLDISEIFFGLFGIFLLLGIIWWGVDLFL"
     gene            complement(447..800)
                     /locus_tag="RJ336_001680"
     CDS             complement(447..800)
                     /locus_tag="RJ336_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002920535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214109.1"
                     /translation="MKCFNAKFMFVGILAVFLSACSSGIPKCSDQDVQNVLTEIILEH
                     NFGRFSEVDRKKLKFTYSGFMSDLTDKESKTQYCKAQVKANGSIDSRPYKWDAWIEYF
                     ARYTDDGMVYVEITR"
     gene            complement(1052..1474)
                     /locus_tag="RJ336_001681"
     CDS             complement(1052..1474)
                     /locus_tag="RJ336_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214110.1"
                     /translation="MDFNSVLFSIGDKLPKDATSTVMLKKKFDRLNEDKQKEVVAQLP
                     MIKLKSPALVFWVGTFLFGAFGVGRFMIGDWVLGLIRLGITIVAMICGVLMITYSALG
                     IIYGLLWLVNWIWWIVDMFLVGKKLRKQNFEKIANIIQ"
BASE COUNT          575 a          305 c          136 g          517 t
ORIGIN      
        1 ctaaaaataa atctactccc caccaaataa tgcccaataa tagaaaaatt ccaaacaacc
       61 caaaaaaaat ttcagaaata tccaagttag aatcattttc atagctaatt cctagtatca
      121 aaaataacac acaaggaaat aaagataata ttatacgcaa tattcctaat gcatagtctt
      181 ttatcataaa tctatcgatt gccaaccaac ctaaacttaa aaaaccacat atcatactca
      241 taattagagg ttttatagga tcttgaagtc ttaaaaatac caaatttgat aaagcttctt
      301 ttttattttg taattgttca aacttaagct ttaaattgaa aaaatcttct tgatttattt
      361 tatcttgtat atttaaaaga aaaacattat agtccatatc cagtctcctc aaaattaact
      421 ttttaaggca tttttgcctt aaaaagttat ctggtaattt ctacatatac cataccatca
      481 tcagtatatc tagcaaaata ctcgatccaa gcatcccatt tgtaagggcg agaatcaata
      541 cttccatttg cttttacttg agctttacaa tactgtgttt tactttcctt atcggttaaa
      601 tcgctcataa aaccgctata agtaaatttc aactttttac gatcaacctc agaaaatcta
      661 ccaaaattgt gttctaaaat aatctcagtt aaaacatttt gtacatcttg atcactacat
      721 tttggaatac cgctactaca agcactcaaa aatactgcca aaattccaac aaacataaat
      781 ttcgcattaa aacatttcat taatttcctc cttttttgtt cacctaaata atattttagt
      841 ttctcttcat ctgtaccaag ttcaccattt tacttgtaat ctctaaaaaa acctgtgcaa
      901 tatttagagc aacagacaaa atatttaaaa gcaattttct ttattgctta agaattctaa
      961 acctcacttg ccacaaaaac aaaatttact aaaaacttga taaaaatatt ttgcaaactt
     1021 atttttgatt gtttttcata aaaactcgaa attattgtat aatatttgca atcttttcaa
     1081 aattttgttt tcttaatttt ttacccacta aaaacatatc tacaatccac caaatccaat
     1141 taacaagcca caacaaacca tatattatcc ctaaagcact atatgtaatc attaaaacac
     1201 cgcaaatcat agctacaatt gtaattccca agcgtataag ccctaaaacc caatctccta
     1261 tcataaaacg acccactcca aaagcaccaa ataaaaaagt ccctacccaa aatactagag
     1321 cgggactttt tagctttatc attggaagct gtgctactac ttctttttgt ttatcctcat
     1381 ttaagcgatc aaatttcttt tttagcatca cggtagatgt tgcatctttt ggcaatttat
     1441 cgccaatgct gaaaagaacc gaattgaaat ccataactac tccttgaaaa ttaaaaaata
     1501 tctcgaatta ttccatacta taacttaatt aat
//
LOCUS       DAPWGO010000130         1405 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.132, whole genome shotgun sequence.
ACCESSION   DAPWGO010000130 DAPWGO010000000
VERSION     DAPWGO010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.132"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            43..1074
                     /locus_tag="RJ336_001682"
     CDS             43..1074
                     /locus_tag="RJ336_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0069 family protein"
                     /protein_id="HDZ5214111.1"
                     /translation="MKKNIVFFEVKGGSDKGEDGYRKDTMPMVNALKAKGWNAEVIFF
                     EVGKKDEIYKYVKENFDGYVSRINPGNLKEENEYFDMLRKLCADKLVGMPHPDAMIGY
                     GAKDALTKLADTDLVPSDTYAYYDIKTFKENFPKSLAKGERVLKQNRGSTGEGIWRVS
                     VEGNVSGDSLPLNTKIKCTEAKDNHVEHRELGEFMDFCEQYIIGDNGMLVDMTFLPRI
                     KEGEIRLLMLYNTPVNVVHKKPAEDADAFSATLFSGAKYRYDKPEDWKTLVDMFLGEL
                     PKVREKLGNYDLPLIWTADFILDTDEKGNDKYVLGEINCSCVGFTSHLELADEVASNI
                     INIVSKTKA"
     gene            complement(1071..1256)
                     /locus_tag="RJ336_001683"
     CDS             complement(1071..1256)
                     /locus_tag="RJ336_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214112.1"
                     /translation="MDKKIKYFILDKFDYSYPILTKDTKCSFCENFFPIEYSSNLKTI
                     EKECPFCNNKMDIKLKD"
BASE COUNT          469 a          159 c          270 g          507 t
ORIGIN      
        1 tttatgcaat aattatttat atcttagata aggagtaaaa taatgaaaaa aaatattgtt
       61 tttttcgaag ttaaaggtgg gagtgataaa ggtgaagatg gttatagaaa agatactatg
      121 cctatggtaa atgccttaaa agctaagggt tggaatgctg aggtgatttt ttttgaagtg
      181 ggtaaaaaag atgaaattta caaatatgta aaagaaaatt ttgatggtta tgtttctcgc
      241 atcaatcctg gcaatcttaa agaagaaaat gagtattttg atatgttaag aaaactttgt
      301 gccgataagc ttgtaggtat gcctcatcct gatgctatga taggttatgg cgctaaagat
      361 gcgcttacaa aattagcaga tactgatctt gttccaagcg atacttatgc ttactatgat
      421 attaagactt ttaaagaaaa ttttccaaaa agtttggcta aaggtgaaag ggttttaaaa
      481 caaaatcgtg gctctacagg agagggaatt tggcgtgtga gtgtagaggg taatgttagt
      541 ggagatagtt tgcctttaaa cacaaaaatc aaatgcacag aagctaagga taatcatgta
      601 gaacatagag aacttggaga atttatggat ttttgtgagc aatatatcat aggtgataat
      661 ggtatgcttg tggatatgac ttttttaccg cgcattaaag aaggtgaaat cagactttta
      721 atgctttata acacccctgt aaatgtagtg cataaaaaac cagctgaaga tgctgatgct
      781 ttttctgcta cgctttttag tggggcaaaa tatcgctatg ataagccaga agattggaaa
      841 actttggtgg atatgttttt aggcgagctt cctaaggtaa gggaaaaatt aggcaattac
      901 gacttaccat tgatttggac ggctgatttt attttagata ctgatgaaaa gggcaatgat
      961 aaatatgttt taggcgagat taattgttct tgtgtaggct ttacttccca tttagaactt
     1021 gctgatgaag tagcttcaaa tattattaat attgtaagta aaactaaggc ttagtcttta
     1081 agtttaatgt ccattttatt attgcaaaat ggacattctt tttctattgt ttttaagttt
     1141 gagctatatt ctatcgggaa aaaattttca caaaatgagc attttgtatc tttggttagt
     1201 ataggatagg aatagtcaaa tttatccaaa ataaaatatt ttattttttt atccattaaa
     1261 tttccttctt tgtctaactt atactttatt tattatttta acgcataaat agttaattag
     1321 aaattttctg aatatttttt ataaaactgt atggcttctt tacatttttt acatttaaat
     1381 tttacaccct taagttgaat ttttt
//
LOCUS       DAPWGO010000131         1315 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.133, whole genome shotgun sequence.
ACCESSION   DAPWGO010000131 DAPWGO010000000
VERSION     DAPWGO010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.133"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            4..741
                     /locus_tag="RJ336_001684"
     CDS             4..741
                     /locus_tag="RJ336_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4261 domain-containing protein"
                     /protein_id="HDZ5214113.1"
                     /translation="MDLNHNFTSFVLLDEVDFNFSELKSILEDKFNIKIADENFTKEG
                     VIFSYENMLITLNLIKNPIPNHEAEYYANFNFMWKDALEQTKKHKAHLLIAVLSQDQS
                     KLEQAKMFTKIAALCLDNKHALGFYTGAVVLEPSFYIENAKMLDDNRLPVYNWIYVSV
                     YPSENGVNAYTYGLRNFDKLELEVCDLNIEEKELFFCIYDIVLHILTYDINLKDKDIL
                     KFEDGKEIKFIKSQGISVENESLKIIF"
     gene            806..1222
                     /locus_tag="RJ336_001685"
     CDS             806..1222
                     /locus_tag="RJ336_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HDZ5214114.1"
                     /translation="MKAKLTLLALLGATVLLAKDMVVPASELPNNAKEFISKNFKTAQ
                     IGLVKKDIDSYDVILNDGTEIDFMINGDWKEVDGKYKALPHTILPSVMKKVSATQPNA
                     QILEIDKEINGYKFKFNNNMKVYTDMQGNVLGQKLD"
BASE COUNT          501 a          142 c          211 g          461 t
ORIGIN      
        1 actatagatt taaatcacaa ttttacctct tttgttcttc ttgatgaagt tgattttaat
       61 ttttcggagt taaaaagcat tttagaagat aaatttaata taaaaatagc tgatgaaaat
      121 tttaccaaag agggagtgat tttttcatat gaaaatatgt tgattactct aaatttgatt
      181 aaaaatccta tacctaatca cgaagcagaa tactatgcaa attttaattt tatgtggaaa
      241 gatgccttag agcaaactaa aaaacataaa gctcatcttc ttatagcggt gctaagtcaa
      301 gatcaaagca aattagaaca agctaaaatg tttacgaaaa ttgcagcttt atgtttggat
      361 aataaacatg ctttaggttt ttatacaggt gcagttgttt tagagcccag tttttatata
      421 gaaaatgcaa aaatgttaga tgataatcgc ttgccggtat ataattggat atatgttagt
      481 gtttatccta gtgaaaatgg agttaatgct tatacttatg ggcttagaaa ttttgataaa
      541 ttagaacttg aagtttgtga tttaaacata gaagaaaaag aacttttctt ttgtatttat
      601 gatattgttt tgcatatttt aacttatgat attaatctaa aagataaaga tattttaaaa
      661 tttgaagatg gaaaagaaat aaaatttata aaaagtcaag gtataagtgt tgagaatgaa
      721 agcttgaaaa ttatttttta agtttcacat tcacttcaca gttttgagtt aaactttcgc
      781 caaccaagac aaaaaaggag aaactatgaa agcaaaatta actttacttg ctttgttggg
      841 tgctacggtg cttttagcta aagatatggt tgttcctgct agcgaacttc caaataatgc
      901 caaagaattt atttctaaaa attttaaaac cgctcaaatt ggtttggtga aaaaagatat
      961 agattcttat gatgtaattt taaatgatgg aactgaaatt gattttatga tcaatggaga
     1021 ttggaaagaa gttgatggaa aatataaggc tttaccacat actattttac ctagtgttat
     1081 gaaaaaagta agtgcaactc aaccaaatgc tcaaattctt gaaatagata aagaaattaa
     1141 tggttataaa tttaagttta ataataacat gaaagtttat acggatatgc aaggaaatgt
     1201 cctaggtcaa aaattagatt aatttttgaa aatttaactc tcttagaaaa tttgatgcaa
     1261 aaatttggaa gcatagtctt ccaaattttt attttttgat tgcaaaaccc aaaat
//
LOCUS       DAPWGO010000132         1296 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.134, whole genome shotgun sequence.
ACCESSION   DAPWGO010000132 DAPWGO010000000
VERSION     DAPWGO010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.134"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            33..1064
                     /gene="pseI"
                     /locus_tag="RJ336_001686"
     CDS             33..1064
                     /gene="pseI"
                     /locus_tag="RJ336_001686"
                     /EC_number="2.5.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid synthase"
                     /protein_id="HDZ5214115.1"
                     /translation="MQIGNFNTDKKVFIIAELSANHAGSLEMALQSIKAAKEAGADAI
                     KIQTYTPDSMTLNSNKEDFIIKGGLWDKRKLYELYQSAKTPYEWHSQIFETAQNEGIL
                     CFSSPFAKEDLEFLKRFDPIAYKIASFEANDENFVRLIAKEKKPTIVSTGIATEEELF
                     KICEIFKEEKNPDLIFLKCTSAYPTAIEDMNLKGIASLKEKFNVEVGLSDHSFGFLAP
                     VMAVALGARVIEKHFMLDKSIESEDSKFSLDFDEFKAMVDAVRQAESALGDGKLDLDE
                     KALKNRVFARSLYASKDIKKGEMFSEENVKSVRPSFGLHPKFYQELLGKKATKDIEFG
                     DALKQGDFQ"
     gene            1061..>1296
                     /locus_tag="RJ336_001687"
     CDS             1061..>1296
                     /locus_tag="RJ336_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ5214116.1"
                     /translation="MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNL
                     DINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNT"
BASE COUNT          502 a          183 c          234 g          377 t
ORIGIN      
        1 ttagtcagga aatttaccaa agaaagaaaa gtatgcaaat aggaaatttt aacaccgata
       61 aaaaggtttt tatcatagca gaacttagtg caaatcacgc aggaagtctt gagatggcac
      121 ttcaaagtat aaaagctgcc aaagaagcag gtgctgatgc gataaaaatt caaacttaca
      181 ctccagatag catgactcta aatagcaaca aagaagattt tattattaag ggtgggcttt
      241 gggataaaag aaaactttat gagctttatc aaagtgcaaa aaccccttat gaatggcatt
      301 ctcaaatctt tgaaaccgca caaaatgaag gcatactttg tttttcaagt ccttttgcca
      361 aagaagattt agaatttcta aaacgctttg atcctatagc ctataaaatc gcttcttttg
      421 aagctaatga tgaaaatttc gtgcgtttaa tcgccaaaga aaaaaaacct actatcgttt
      481 caacgggcat tgctacagaa gaagaacttt ttaaaatctg tgaaattttt aaagaagaaa
      541 aaaatcctga tttaatcttt ttaaaatgca cttcggctta tcctactgcc atagaagata
      601 tgaatttaaa aggcatagca agtttaaaag aaaaatttaa tgttgaagtg ggactaagcg
      661 atcatagctt tggtttttta gcccctgtta tggcagtagc acttggagct agagtgatag
      721 aaaagcattt tatgttagat aaaagcatag aaagtgaaga cagtaaattt agtcttgatt
      781 ttgatgaatt taaagctatg gtagatgcag taagacaagc tgaaagtgct ttaggcgatg
      841 gtaagttaga tctagatgaa aaggcgctta aaaaccgtgt ttttgcaaga agcttatatg
      901 caagtaagga tatcaaaaaa ggtgaaatgt tcagcgaaga aaatgtaaaa tccgtgcgtc
      961 cttcttttgg actacatcct aaattttatc aagaactttt aggaaaaaaa gctactaaag
     1021 atatagaatt tggtgatgct ttaaaacaag gagatttcca atgaccttca cccctaccca
     1081 aaaagaactc tttaacaaaa acattgaggc tttaagtaat attcttttaa aagaaagttt
     1141 aaaagaaatc aagtctagta aatttgaact tatcttaggt aaagataatc tagatatcaa
     1201 tttaaaagat acaagtataa aaaataatgg gggggggtat aatgaaaatt tactttatca
     1261 agatcccatt aaagaattgc aaactatgct aaatac
//
LOCUS       DAPWGO010000133         1171 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.135, whole genome shotgun sequence.
ACCESSION   DAPWGO010000133 DAPWGO010000000
VERSION     DAPWGO010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1171)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1171)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.135"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            84..>1171
                     /locus_tag="RJ336_001688"
     CDS             84..>1171
                     /locus_tag="RJ336_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDZ5214117.1"
                     /translation="MQKINSGKSAGISAKLTLWVGILVVLILAITSAVSYFDSRNNTY
                     ELLKDTQLKTMQDVGAFFESYGMSKRHGIQILANELNKRPDMSDEELINLIKAFKEVN
                     GYDLVYVGFDNTGKNYQSDDQILDLSKGYDTKNRPWYKAAKEAKKLIVTEPYKSANSG
                     EVGLTYAAPFYDRNGNFRGVVGGDYDLAKFSTDVLAVGKSQNTYTVVLDPEGTILFRD
                     DITKILTKTELSINIANAIKANPALIDPKNTDTLFTAKDHQDVDYAIMCNSAFNPLFR
                     ICTITENKVYTEAVNSILMKQVIVGIIAIIIALILIRFLISRSLSPLAAIQTGLTSFF
                     DFINHKTKNVSTIEVKSNDEFGQISNAI"
BASE COUNT          425 a          176 c          186 g          384 t
ORIGIN      
        1 gttcattttt tatacacttt ttctcttatt ttttgctaga ataatatttt tatttcattt
       61 tcaatataaa tataggagtt ataatgcaaa aaataaattc aggcaaatcc gctggaattt
      121 cagccaagct tacgctatgg gttggaattt tagttgtatt aattttagca atcacaagtg
      181 ctgttagtta ctttgattcg agaaacaata catatgaatt gctaaaagac actcagttaa
      241 aaactatgca agatgtgggt gctttttttg aaagctatgg tatgtcaaaa agacatggta
      301 ttcaaatact agccaatgag cttaacaaac gtcctgatat gagcgatgaa gaactgatca
      361 atcttatcaa agcattcaaa gaagttaatg gctacgatct agtttatgta ggatttgata
      421 atacaggaaa aaattatcaa tctgatgatc aaattttaga cttatcaaaa ggttatgata
      481 ctaaaaatcg cccttggtat aaagctgcca aagaagcaaa aaaacttata gtaacagaac
      541 cttataaatc cgccaatagt ggagaggttg gtttaactta cgctgctcca ttttatgata
      601 gaaatggaaa ttttagaggt gttgtgggtg gagattatga tctagcaaaa ttttcaaccg
      661 atgtgttagc tgtgggtaaa tcacaaaata cctataccgt agtgcttgat ccagaaggaa
      721 cgatactttt tagagacgat atcactaaaa tcctaacaaa aacagaatta agtatcaata
      781 tcgccaatgc aatcaaagca aatcctgctc ttattgatcc aaaaaataca gatactttat
      841 ttaccgctaa agatcaccaa gacgtagatt atgcgattat gtgtaattct gcttttaatc
      901 ctttatttag aatttgtaca ataacagaaa acaaagttta taccgaagct gttaattcta
      961 ttttaatgaa acaagttata gttggtatta tagctataat catagcttta atcttgatta
     1021 gatttttaat cagcagaagt ctctccccac ttgcagctat ccaaacaggt ttaacttcat
     1081 tctttgattt tatcaatcat aaaacaaaaa atgtttctac tatagaagta aaaagtaatg
     1141 atgaatttgg acaaatctca aatgctatca a
//
LOCUS       DAPWGO010000134         1152 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.136, whole genome shotgun sequence.
ACCESSION   DAPWGO010000134 DAPWGO010000000
VERSION     DAPWGO010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1152)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1152)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.136"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(86..448)
                     /locus_tag="RJ336_001689"
                     /pseudo
     CDS             complement(86..448)
                     /locus_tag="RJ336_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936471.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
BASE COUNT          380 a          200 c          104 g          468 t
ORIGIN      
        1 tatatttaca gatagcttgt aattcgtata ataaatactt tcaactaaat caaaattcca
       61 taattgcaaa tttctttcaa ttatactaaa gatttccttt tccttttcct ttatcataat
      121 attccttctt taacctccta atttcaaata gcaacttgat ataccccccc ccataccaat
      181 tctgacttgc ttttataaat tcttgtccta gtttataagt aaaacattct ttttctttta
      241 aagcttcatt ataatctgga tatgtttcta aaggaggcaa agctaaattt ggattttctt
      301 ttattttttc ttcataggct ttttgttctt gtttatgttt atcttttata tgagataata
      361 cataaggcat tcttatatat cctaatatgc tttttgaatt ttctattaat gcaactccaa
      421 atttataaca aagatgattt ctaacccttt gcaaagcact caaataaaca ttattttcaa
      481 tttttccata ctttttcata atctcttgaa aaaaatattc aaatctatta agcttcttgt
      541 tatcaacttt accttgaagt tttagtaaat ccaaatatat ttctcttgat atattaggca
      601 taatgtagcc attagagact aaagactctc ccgttaactt ttcctctata taggtctgaa
      661 caatttcaaa attattaagc aaaatccaat ttcttgcaac atgatgatta tgtagtactt
      721 taggaatttg ttcaaaaaaa tcaaaatctt tgttaaaaaa ggcataatac catattttag
      781 agtaaacttc cattgtattt cttctgccat atacggcaaa atcttttgga gtgccacttt
      841 gataaggaaa aatttttaaa gctaactcgc cattgtttac ctcatttaat ctttttaaat
      901 ctaaatttgt aatatattta gcatcgggtc taagcctaat aacaaaatca tacttaaaat
      961 tattttgctt ttcatattct tccattaatt caaaagctct aaaaatacca taatttaatt
     1021 tagaattgtt tacaactttc ccgtatctat cttcaaaatc tttttgtctc tctataacat
     1081 aagatttaat ttcacttata ccatctaact gtatagccga aacttcatct tgcgaataaa
     1141 actccttatt ta
//
LOCUS       DAPWGO010000135         1131 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.137, whole genome shotgun sequence.
ACCESSION   DAPWGO010000135 DAPWGO010000000
VERSION     DAPWGO010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.137"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(2..1099)
                     /locus_tag="RJ336_001690"
     CDS             complement(2..1099)
                     /locus_tag="RJ336_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HDZ5214118.1"
                     /translation="MKTSFLAHSVAIVRSNFKGLLFTACIVIFAMYLSSVQSIKDTTH
                     LAATAFAIIIGVLLSPWFFKYQHHFQAGVHFSAKKLLRLGIVLYGFNITLTELLSVGL
                     KGFLLSAIVIFFVFMIALFIGVKIFKLDKETSMLVGAGSAICGAAAVLALESSLKSDP
                     FKGILAVGTVVIFGLVFMFLYPIAFSLNLFPFFDQNAMGVFMGATLHEVANVAGAAEM
                     AKDMAGFEQGASNVAVIIKMMRVILLVPFLLIVTYFFAKNQHSSSGKTAKSITIPYFA
                     FAFLGMIVLNTYLASKESILGIATSDIISLGKTLCTLCIVFAMAALGLQIDFKKFLKS
                     GSRVFGLAFVLGLVLIFGGYFLTLAFKGMLW"
BASE COUNT          447 a          234 c          143 g          307 t
ORIGIN      
        1 attaccaaag cataccttta aaagctaagg ttaaaaaata tcctccaaaa atcaaaacaa
       61 gtcccaaaac aaaagccaag ccaaacactc tagagccact ttttaaaaat tttttaaagt
      121 caatttgcaa gcctaaagct gccatagcaa aaacgataca taaagtacaa agtgttttac
      181 ctaaagagat aatatcactc gtagcaatac ctaaaatact ttctttactt gctagatatg
      241 tatttaaaac tatcatacct aaaaatgcga atgcaaaata aggtatagtg atactttttg
      301 cagtttttcc actgcttgaa tgctgatttt tagcgaaaaa ataagtcact ataagcaaaa
      361 aaggcacaag taaaatcact ctcatcattt ttataatcac tgcaacatta gaagctcctt
      421 gctcaaatcc tgccatatcc tttgccattt cagcagcacc tgcgacattt gccacctcat
      481 gcaaagtagc tcccataaaa acacccatag cattttgatc aaaaaaagga aaaagattta
      541 aagaaaaagc tatgggatac aaaaacataa acacaagtcc aaaaatcacc accgtaccta
      601 cagctaaaat tcccttaaaa ggatcacttt tcaaacttga ctctagtgct aaaaccgctg
      661 ccgcaccgca aatcgcactt ccggctccaa caagcataga agtttcttta tcgagtttaa
      721 aaattttcac tcctataaat aaagcaatca taaaaacaaa aaatatcact atagcagaaa
      781 gcaaaaaccc tttcaaccct acacttaaaa gctcagttaa agtgatatta aaaccatata
      841 aaacaatacc gagtcttaaa agctttttcg cactaaaatg cactccagct tgaaaatgat
      901 gttggtattt aaaaaaccaa ggagaaagca atactcctat gatgatagca aaggcagtcg
      961 ctgctaaatg ggtagtatct ttgatacttt gaacactaga aagatacata gcaaaaatca
     1021 ctatacaagc agtaaaaagc aaacccttaa aatttgatcg cactatagcc acgctatgtg
     1081 ctaaaaaact tgttttcatt tattttcctt tttttgtaaa ttttgtgtta t
//
LOCUS       DAPWGO010000136         1081 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.138, whole genome shotgun sequence.
ACCESSION   DAPWGO010000136 DAPWGO010000000
VERSION     DAPWGO010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.138"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..213)
                     /locus_tag="RJ336_001691"
     CDS             complement(<1..213)
                     /locus_tag="RJ336_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDZ5214119.1"
                     /translation="MGFRINTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADD
                     ASGMAIADSLRSQANTLGQAISNGNDA"
     gene            complement(310..>1081)
                     /locus_tag="RJ336_001692"
     CDS             complement(310..>1081)
                     /locus_tag="RJ336_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ5214120.1"
                     /translation="FSYTLALALGFKNIIMIGQDLAFDEKGNSHSKGFDFGEKFSGEE
                     NIDKLKVPAYAGKGEVLTHITWNDYRIKLEYLFACNDQKAKFYNATEGGARINFTEEL
                     SFKECCEKLLTKEKPKFELPKSLTKNRSDKLLVKFKEKIQKDQENAKRFLDDALALKQ
                     ILENILSKDFLLPLEFLEKVYQNIENFNHNLDTDEFIQDEVLRGAFAYRGKMIADVLK
                     LHIQDKTHFITAYIKAYDEWLLYFIEKLGQKYKSLSKV"
BASE COUNT          356 a          183 c          134 g          408 t
ORIGIN      
        1 agcatcgtta ccattagata tagcttgacc taaagtatta gcttgagatc ttaaactatc
       61 tgctatcgcc atccctgaag catcatctgc tgcggagttg attctaagac ctgaactaag
      121 tctgcttaaa gaagcatcta aacttttact atttaaatca gcgtttgctt tagcatttaa
      181 agctgcaaca ttggtgttaa tacgaaatcc cattttaaat ccttttaaaa aaattcaagc
      241 tcatccatga acttgttaaa tgctatatcg tgcaatcaaa aaaatatttt atactttagc
      301 aataaaattt catacttttg acaaagactt gtatttttgc cctaactttt ctataaaata
      361 aagcaaccat tcatcataag ctttgatata agctgtgatg aaatgcgttt tatcttgtat
      421 atgaagtttt aatacatcag caatcatttt tccacgataa gcaaaagctc ctcttaaaac
      481 ttcatcctgt ataaactcat ctgtatctaa attatgatta aaattttcta tattttgata
      541 aactttttct aaaaattcta aaggtaaaag aaaatcttta ctgagtatat tttctaaaat
      601 ttgttttaaa gctaaggcat cgtctaaaaa tcttttggca ttttcttgat ctttttgtat
      661 tttttctttg aatttaacta ggagtttatc acttctattt ttagttaaac tttttggaag
      721 ttcaaatttg ggtttttctt ttgtaaggag tttttcacaa cattctttaa aggaaagttc
      781 ttcagtgaaa ttaatccttg ctccaccttc agtagcattg taaaatttag ccttttgatc
      841 attgcaagca aaaagatatt caagttttat acgataatca ttccaggtta tatgagttaa
      901 aacttcacct ttacctgcat aggcagggac tttaagttta tctatatttt cttcaccgct
      961 aaatttctcc ccaaaatcaa aaccttttga gtgtgaattt cctttttcat caaaggctaa
     1021 atcttgccct atcataataa tatttttaaa tcccaaagcc aaagctaaag tataagaaaa
     1081 a
//
LOCUS       DAPWGO010000137         1050 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.139, whole genome shotgun sequence.
ACCESSION   DAPWGO010000137 DAPWGO010000000
VERSION     DAPWGO010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.139"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..>1050
                     /locus_tag="RJ336_001693"
     CDS             <1..>1050
                     /locus_tag="RJ336_001693"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214121.1"
                     /translation="LTGNIGKYILEEERLNDEILYTRKILLNGNINYQNIKDNLYERV
                     SKDILSCYLLNKNFYFCDTNDSIDNLLDLYKNYIHGSSNIITRNYFIATLIRFCVILG
                     KQELFYIKEGFDLRYYLLQKMYDINTSGSKIYHSLFIDELQDQLKNGNIKSEVKFAIC
                     MYGMLRGDWKGTLEKNIKIAKEQLNADIFLFTWSKKQDWQNITTGGDCWVDRKLAKDF
                     FQESPKEILKTSDLKKNMPNVFSRLNHDIFSKYNYSELKNLIEYYENFRGLLVEDQQK
                     VQQDESLSSNIEFMYYAIYKSFKILEKYEESNNIKYDYIIHMRVDSEILIEGCLKNEI
                     IKLRSNNIYDLKTLAG"
BASE COUNT          417 a           79 c          176 g          378 t
ORIGIN      
        1 ttaactggta atataggtaa atatatacta gaggaagaaa gattaaatga tgaaatatta
       61 tatacaagaa aaatattact taatggcaat ataaactatc aaaacataaa agataattta
      121 tatgagaggg tgtctaagga tatactttct tgttatttat taaataaaaa tttttatttt
      181 tgcgatacaa atgatagtat agacaattta ttggatttat ataaaaatta tatccatggt
      241 tctagtaata ttattacgag aaattatttt attgctactt taatacgttt ttgtgttatt
      301 ttaggcaagc aggaattgtt ttatattaaa gaaggttttg atctaagata ttatttattg
      361 caaaagatgt atgatattaa taccagtggt tctaaaatat atcatagttt atttattgat
      421 gaactacaag atcaattaaa aaatggaaat ataaaaagtg aggtaaaatt tgcaatttgt
      481 atgtatggta tgttgcgtgg tgattggaag ggaacgttag aaaaaaatat aaagattgcc
      541 aaagagcaat taaatgctga tattttttta tttacttgga gtaagaaaca ggattggcaa
      601 aatataacaa ctggtggaga ttgttgggta gataggaaat tggcgaaaga tttttttcaa
      661 gaaagtccaa aagaaatttt aaaaactagt gatttaaaaa aaaatatgcc caatgttttt
      721 tctagactca atcatgatat tttttctaaa tataattata gcgagttaaa aaatcttatt
      781 gagtattatg aaaattttcg tggtttattg gttgaagatc agcaaaaggt gcagcaagat
      841 gaaagcttaa gttctaatat tgaattcatg tattatgcta tttataagtc ttttaaaatt
      901 ctagaaaagt atgaagagtc aaataatatt aagtatgatt atattatcca tatgagagtt
      961 gattctgaaa tattgataga aggttgttta aaaaatgaaa ttataaaact acgatcgaat
     1021 aatatttatg atttaaaaac tttggcaggt
//
LOCUS       DAPWGO010000138         1011 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.140, whole genome shotgun sequence.
ACCESSION   DAPWGO010000138 DAPWGO010000000
VERSION     DAPWGO010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.140"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            12..371
                     /locus_tag="RJ336_001694"
     CDS             12..371
                     /locus_tag="RJ336_001694"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-R-sulfoxide reductase"
                     /protein_id="HDZ5214122.1"
                     /translation="MKELNEEEKKVILNKGTEAPFSGKYNDFYEKGIYQCKQCGASLY
                     KSEDKFKSGCGWPSFDDEIKGAVKRIPDKDGIRTEIVCANCNGHLGHVFEGEGFSAKN
                     VRHCVNSISLEFVKTKD"
     gene            386..>1011
                     /locus_tag="RJ336_001695"
     CDS             386..>1011
                     /locus_tag="RJ336_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HDZ5214123.1"
                     /translation="MGSELYLMFFAAITLLAILNPFGNLTQFLAMSDGLPLMLRKKLF
                     RTILYTAFTIVLVFLLSGPLFMNYIFRVSLDDLRVSGGLVLIIMAIKNLLFSTKIATK
                     DFSSYQDMDDKEILRQSLIPMAFPMLVGPGTLASVIVIAEDGGLDVALGGVMIAFIFM
                     FILFHFAATIEKIVGKLILHVFSRIAQVFIAAMGFKMIIVGLKDIFNL"
BASE COUNT          313 a          106 c          203 g          389 t
ORIGIN      
        1 aagggtagat catgaaagaa ttaaatgaag aagaaaaaaa agtaatttta aataaaggaa
       61 cagaagctcc ttttagtggg aaatataatg atttttatga aaaaggaatc tatcaatgca
      121 agcaatgtgg agcttcgctt tataaatccg aagataaatt taaatcaggt tgtgggtggc
      181 ctagctttga tgatgaaata aaaggggctg ttaaaagaat tcctgataaa gatgggatta
      241 gaaccgagat tgtatgtgca aactgcaatg gacatttagg tcatgttttt gaaggagaag
      301 gattttctgc taaaaatgta agacattgtg taaattctat ttctttggaa tttgtaaaaa
      361 ctaaggattg atagtgtttt ctagtatggg ttctgagctt tatttgatgt tttttgctgc
      421 aattacttta cttgccatat taaatccttt tggtaattta actcaatttt tggctatgag
      481 tgatggattg cctttaatgc ttcgaaaaaa actttttaga actattctct atacagcttt
      541 tactatagtt ttggtatttt tattatcagg acctttgttt atgaactata tttttagggt
      601 ttcattagat gatttaaggg tttctggtgg tttggttctt attataatgg ctattaaaaa
      661 tttacttttt tcaacaaaaa ttgcaactaa ggattttagt tcttatcagg atatggatga
      721 taaggaaatt ttaagacaga gtttaatacc tatggcattt cctatgcttg ttgggcctgg
      781 aactttagct agtgttatcg ttatagccga agatggtggg cttgatgttg ctcttggcgg
      841 agtaatgata gcttttattt ttatgtttat actttttcat tttgcagcta ctatagaaaa
      901 aatagttgga aaattgattt tacatgtttt ttctcgtata gcacaagtat ttattgctgc
      961 tatggggttt aagatgatta ttgtaggttt aaaggatata tttaacttat a
//
LOCUS       DAPWGO010000139          960 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.141, whole genome shotgun sequence.
ACCESSION   DAPWGO010000139 DAPWGO010000000
VERSION     DAPWGO010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.141"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(75..>960)
                     /locus_tag="RJ336_001696"
     CDS             complement(75..>960)
                     /locus_tag="RJ336_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HDZ5214124.1"
                     /translation="NPNYVFIQGDISDVFLVNEIFSKYKINAVINFAAESHVDNSIKN
                     PDIFIKTNIYGTWNLLNSAYKTWFLEPFLKKDEFKQSFFYQISTDEVYGSLGENGKFT
                     EDNAYAPNSPYSASKASADMLVRSYHHTYGLNAVISNCSNNYGPFQHDEKLIPTIIRN
                     ALNNAQIPIYGDGKNIRDWLYVKDHCVAIESIYKYAFEKIKENNSFFDVFNIGTNEEW
                     QNIDIANKICSYLDNVLPKNTSYKEQITFVKDRAGHDRRYAIDPTKLQRVIGWKAQEN
                     FNSGLDKTIQWYIKKYKG"
BASE COUNT          311 a          144 c          110 g          395 t
ORIGIN      
        1 atctttttga tggacattta atattgaatt tttactattt atggttttga attttaatat
       61 tgtatagttc aaatttaacc cttgtatttt ttaatatacc attgtatagt tttatctaaa
      121 ccgctattaa aattttcttg tgctttccaa cctataaccc tctgtaattt tgtcggatct
      181 atggcatatc ttctatcatg acctgctcta tcctttacaa aagtaatttg ctctttataa
      241 gaagtatttt ttggcaatac attatctaaa taagaacaaa ttttattagc tatgtctata
      301 ttttgccatt cttcatttgt tcctatatta aatacatcaa aaaagctatt attttctttt
      361 atcttttcaa aagcatattt ataaatactt tctatagcca cgcaatgatc ttttacatat
      421 agccaatctc ttatattctt accatctcca tatattggaa tttgagcgtt atttaatgca
      481 tttcttatta tggtaggtat aagtttttca tcatgctgaa aaggtccgta attgttagaa
      541 caattagaaa taacagcatt taatccataa gtatgatgat aacttctaac aagcatatca
      601 gcacttgctt ttgaagctga ataaggggaa tttggagcat aagcgttatc ttctgtaaat
      661 tttccatttt ctcccaaaga tccataaact tcatctgtac ttatttgata aaagaaactt
      721 tgtttaaatt cgtctttttt aagaaaaggt tcgagaaacc aagttttata agctgagttt
      781 aataaattcc aagttccgta tatatttgtt tttataaaaa tatctggatt ttttatagaa
      841 ttatctacat gtgattctgc tgcaaaattt ataaccgcat ttattttata tttgctgaaa
      901 atttcattaa ccaaaaaaac atcacttata tctccttgaa taaatacata attaggatta
//
LOCUS       DAPWGO010000140          955 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.142, whole genome shotgun sequence.
ACCESSION   DAPWGO010000140 DAPWGO010000000
VERSION     DAPWGO010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 955)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 955)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.142"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            56..>955
                     /locus_tag="RJ336_001697"
     CDS             56..>955
                     /locus_tag="RJ336_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDZ5214125.1"
                     /translation="MKSVKLKVALIANLIAVVCLVILGVITFMFVKQAIFHEVVKAET
                     NYVKTAKNSMESFKARNSLALESLAKSILKHPVEQLDSQDALMRYVGKDLKNFRDAGR
                     FLAVYIAQPNGELVVSDPDSDAKKVDFGTYGKADNYDARTREYYIEAVKTNKLYVTPS
                     YIDATTNLPCFTYSTPLYKDGKFIGVLAVDVLVTDLQAEFENLPGRTFVFDEENKVFA
                     STDKTLLQQGYDISAIANLAKIKENFEPFEYTRPKDGSERFAVCTKVSGVYTACVGEP
                     IEQIEAPVYKIAFIQTAIVIFTSI"
BASE COUNT          344 a          114 c          176 g          321 t
ORIGIN      
        1 taaaacttta tgtagatatc cctataaaat aatattagaa aggagcgctt aaattatgaa
       61 aagcgtaaaa ttgaaggttg cactgattgc aaatttaatc gcagtagtgt gtttggtaat
      121 tttaggtgtt ataacattta tgtttgtaaa gcaagcaatt tttcatgaag ttgtaaaagc
      181 tgaaacaaac tatgttaaaa cagctaaaaa ttctatggag tcttttaagg caagaaattc
      241 tttagctctt gaaagtttgg ctaaaagtat tttaaagcat cctgtagaac agttagatag
      301 tcaagatgct ttaatgcgtt atgttggaaa agatttaaag aattttagag atgctggaag
      361 atttttagca gtttatatcg ctcaaccaaa cggagaactt gttgtaagtg atccagattc
      421 tgatgctaaa aaagtagatt ttggaactta tggaaaagct gataattatg atgctagaac
      481 aagagagtat tatatagaag cagtaaaaac aaataaactt tatgttaccc catcttatat
      541 agatgcaact acaaatttac cttgttttac atattctacc cctctttata aagatggtaa
      601 atttataggg gttttagctg tggatgttct tgtaacagat ttgcaagcag aatttgagaa
      661 tttaccaggt agaacttttg tatttgatga agaaaataaa gtatttgctt ctacagacaa
      721 aactcttttg caacaaggtt atgatattag tgcaattgca aatcttgcaa aaattaaaga
      781 aaattttgaa ccttttgaat atactagacc aaaagatggt agtgaaagat ttgctgtgtg
      841 tacaaaagtt tctggggttt atactgcttg cgttggagag ccaatagaac aaatagaagc
      901 tccagtttat aaaattgcat ttatacaaac tgcgattgtt atttttacaa gtatt
//
LOCUS       DAPWGO010000141          948 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.143, whole genome shotgun sequence.
ACCESSION   DAPWGO010000141 DAPWGO010000000
VERSION     DAPWGO010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 948)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 948)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.143"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            57..948
                     /locus_tag="RJ336_001698"
                     /pseudo
     CDS             57..948
                     /locus_tag="RJ336_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866159.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          420 a           93 c          131 g          304 t
ORIGIN      
        1 ttataccaaa taaaaatata agggtaataa ttagagaaaa attactcaat caatttatgc
       61 aaataaaact tgataattta aattcgtata ttccaaaaga tatagtagat aatatagaaa
      121 aatatgataa tgaacatttt tataaaataa atcacattat aaaatctaaa cacaaaggat
      181 tttttgattt tgacgaaaaa tctaaaaatc caacatcacc tttaaatcca tgggcttata
      241 taagagtaaa aaatgaagca ttaactttga aagcttcgtt aaaaagtata cttccggcta
      301 tacaaagagg gattatagga tataatgatt gcaatgatgg aagcgaagag ataatcttag
      361 aattttgcaa acagtatcct tcttttatac cagtaaaata tccttatgaa gtacaaattg
      421 aaaatccaca aagtgaagaa aataaacttt atagttatta taattatgtt gcaagcttta
      481 ttccacaagg agaatggctt ataaaaatag atgttgatca tatgtatgat gctaaaagat
      541 tatacaaaag tttttatata cctaaaaaaa agactatgat atactttgtt attctcgaat
      601 agatttttat tataaagatg atgatagagc tgaggtattt atagtaaagt ataagagtat
      661 caataatatc ttgaataaca agagtaatga tcaatggttg ataaaaaata atcatcttaa
      721 atgggcagaa agtatgcatg aagataggta ttgtatagag tatttggata taaaaaagtt
      781 aaaaatttat caaacagaat ttttaaacta tcattttcca tattttaaga gaagcttaga
      841 taaaaataag atagaattaa ttcccataga tgattttagt atcaaagaat ataaagatat
      901 aatatcacct gatatggtaa ctaaagaaaa attgctatat ttaaaaaa
//
LOCUS       DAPWGO010000142          947 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.144, whole genome shotgun sequence.
ACCESSION   DAPWGO010000142 DAPWGO010000000
VERSION     DAPWGO010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.144"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..>947
                     /locus_tag="RJ336_001699"
     CDS             <1..>947
                     /locus_tag="RJ336_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HDZ5214126.1"
                     /translation="FINNALLTHQYTKYNKKNKKYWVLKLQTENFTFYTTSFKDLNLS
                     KNQLLSLRIITHNINFKDYLSKSFYAPSYDFEKLKEKEYNPIISYFLNQHTNEKIKEF
                     YGALFFALPISLELRNDVNYYGIAHLIAISGYHIGLLFSLIFFILAPIYSFFQKIYFP
                     YRNLRLDLSILIFTLLLAYACLIGFIPSFVRSLIMAFWVFYLLCKNIKIINFFTLFCS
                     ILLCISLYPRLLFSIGFLFSILGVFYIFLYMHHFANKFNNLINIILLNIWTFFAMVLP
                     VLYFFPLISYQQILGIILSGIFVIFYPLVLFLHLINYGD"
BASE COUNT          303 a          123 c          103 g          418 t
ORIGIN      
        1 actttataaa taacgctcta ttaacgcacc aatatacaaa atataataaa aaaaataaaa
       61 aatactgggt tttaaagtta caaactgaaa acttcacttt ttatactaca agttttaagg
      121 atttaaattt aagcaagaat caacttttaa gccttagaat tatcacccat aatattaact
      181 ttaaagacta tctgagcaaa agtttttatg caccttctta tgattttgaa aaattaaaag
      241 aaaaagaata caatcccatt atatcttact tcttaaatca acatacaaat gaaaaaatta
      301 aagaatttta tggtgcttta ttttttgcac tgcccatatc tttagagctt agaaacgatg
      361 taaattacta tggcatagca caccttatag caattagcgg ttatcacata ggcttgcttt
      421 ttagtttaat tttctttatt ttagctccaa tttatagttt tttccaaaaa atatattttc
      481 cttatagaaa tttacgttta gatttaagta ttttaatttt tacactactt ttagcttatg
      541 cttgtttaat aggatttatc ccttcttttg tgcgctcctt gattatggct ttttgggttt
      601 tttatctatt gtgcaaaaat ataaaaatta ttaatttctt tacgcttttt tgtagtattt
      661 tattgtgcat ttctctttac cctagacttt tatttagtat tggattttta ttttctattt
      721 taggtgtttt ttatattttt ttatatatgc atcattttgc aaataaattt aataatctta
      781 taaatattat tttgcttaat atttggactt tttttgctat ggttttacct gtgctttatt
      841 tttttccact tataagctac caacaaattt taggtattat tttgagtgga atttttgtaa
      901 tattttatcc tttagtatta tttttgcatc ttataaacta tggagat
//
LOCUS       DAPWGO010000143          899 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.145, whole genome shotgun sequence.
ACCESSION   DAPWGO010000143 DAPWGO010000000
VERSION     DAPWGO010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.145"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            43..840
                     /locus_tag="RJ336_001700"
     CDS             43..840
                     /locus_tag="RJ336_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214127.1"
                     /translation="MLKKEFDEKIKSLGFTRQDFCNMTGLAYSSVSNWNDNNKPIPIW
                     VDTWLEKYEEEKTFSNVRGKITINKTTMENTRELLKQKYLMLNLRKPQDCLKLSYQYH
                     QVKVNTYFDYYENTFNLFLVLSYEKSYYFTPLNIDNLIVKNPYLNDIPKEILGQILDN
                     GSLKDFYDNMREHMIHDDVQKSNYEDYEFKNGLKSNKNNDKNPFLSHLRKMPMSENHL
                     NFLNTQFNISKYILQRIKAKGYTIVTTANFSERKSLTLILNESSIKL"
BASE COUNT          382 a           90 c          118 g          309 t
ORIGIN      
        1 tatattttgt tataattata tcaactaaat ttgaggataa ttatgttaaa aaaagagttt
       61 gatgaaaaaa ttaaaagttt aggatttaca agacaagatt tttgcaatat gacaggctta
      121 gcttatagta gcgttagcaa ttggaatgat aataataagc ccattcctat ttgggttgat
      181 acttggcttg agaaatatga agaagaaaaa acattttcta atgtaagagg caaaataact
      241 ataaataaaa caacgatgga aaatacaaga gaacttttga aacaaaaata cttaatgtta
      301 aatttaagaa aacctcaaga ttgtttaaag ctaagttatc aatatcatca agtaaaagtt
      361 aatacttatt ttgactatta cgaaaatact tttaatttat ttcttgtgtt aagttatgaa
      421 aaatcttatt atttcacgcc gcttaatatt gataatttaa tagtaaaaaa tccttattta
      481 aatgatattc caaaagaaat attagggcaa atattggata atggcagttt aaaagatttc
      541 tatgacaata tgagagaaca tatgatacat gatgatgttc aaaaaagcaa ttatgaagat
      601 tatgaattta aaaatggttt aaagtctaat aaaaataatg ataaaaatcc atttttatct
      661 catttaagaa aaatgcccat gtcagaaaac catttaaatt tcttaaatac tcaatttaat
      721 atttcaaaat atattttgca aagaataaaa gcaaaagggt atactatagt aactactgca
      781 aatttttcag aaagaaaatc tcttactttg attttaaatg aaagtagtat aaagctttag
      841 ttttttctaa ttttttagaa aaagtctaca taccatatag cattagttta aaagatcta
//
LOCUS       DAPWGO010000144          895 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.146, whole genome shotgun sequence.
ACCESSION   DAPWGO010000144 DAPWGO010000000
VERSION     DAPWGO010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.146"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(66..362)
                     /locus_tag="RJ336_001701"
     CDS             complement(66..362)
                     /locus_tag="RJ336_001701"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214128.1"
                     /translation="MSNKYEGHKETLSKKSQRIKEGLKNNSTIQMLLCQGIMYEWDYI
                     VKCCRLTNNGDIYDFLSACFNKEKEIIKNTCNKLKDFKNDPNSLNDCCNKKIDN"
     gene            complement(355..807)
                     /locus_tag="RJ336_001702"
     CDS             complement(355..807)
                     /locus_tag="RJ336_001702"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214129.1"
                     /translation="MTNAISISNQESIFGGISILKENLTELIKKFKKAIEERTKTKKY
                     NNLCVEIIRDMENLSAFYFKLKSPIEDKQFKDISKKLIKIYQEINDISYKRMCEAENK
                     SKKCDEKVFFASLALIEVINFSLDDDLMKAMGGYKKANLVGLGKTIYE"
BASE COUNT          280 a          137 c           83 g          395 t
ORIGIN      
        1 tagtgtcaat ggctattatt aattatagca taaattcatg taattattta taatataaat
       61 aagtattaat tatctatctt tttattgcaa caatcattta aggaatttgg gtcattttta
      121 aaatctttaa gtttattgca tgtattttta atgatttctt tttctttatt aaaacaagca
      181 cttagaaaat cataaatatc accattattt gttaatctac aacattttac tatataatcc
      241 cactcataca taattccttg acacaatagc atttgaatgg ttgaattgtt ttttagtcct
      301 tcttttattc tttgtgattt tttacttaat gtctctttat gcccttcata tttattactc
      361 ataaatagtt tttccaagtc caactaggtt tgctttttta tatccaccca tagctttcat
      421 taaatcgtcg tctaagctaa aatttatgac ctctatcaaa gccaaacttg caaaaaaaac
      481 tttttcatca catttcttac ttttattttc agcttcgcac attcttttgt aagatatatc
      541 atttatttct tggtatattt taataagttt tttagatata tctttaaatt gcttatcttc
      601 aattgggctt tttaatttaa aatagaaagc agaaagattc tccatatctc ttattatttc
      661 aacacaaaga ttattatatt ttttggtctt tgtacgctcc tctatcgctt ttttaaattt
      721 tttaattaac tctgtaagat tttctttcag aatacttatt ccgccaaaaa tactttcttg
      781 gtttgatata cttattgcat ttgtcatgca gtatcctttc ataactttgc atagtatttt
      841 atgtgtcgat aaatacctaa cataataaaa attatactac agctataata aaaat
//
LOCUS       DAPWGO010000145          858 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.147, whole genome shotgun sequence.
ACCESSION   DAPWGO010000145 DAPWGO010000000
VERSION     DAPWGO010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 858)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 858)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.147"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..364
                     /locus_tag="RJ336_001703"
     CDS             <1..364
                     /locus_tag="RJ336_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214130.1"
                     /translation="QEEISKLKQDKQKLLTNIQDLNFTLSNKISSTQQQFHILSTITK
                     EINLDKNKAIILNQIISWLNSNELKITNLEFKQTKIILSFIDENHFKKALENLNLTFK
                     ILDKNEETFNIILEVIHE"
     gene            357..>858
                     /locus_tag="RJ336_001704"
     CDS             357..>858
                     /locus_tag="RJ336_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214131.1"
                     /translation="MNKIEVFLQNLNPREKFLFISFICLCALFLAFKIHDHFLENIFQ
                     KTLVEHNYLALNEAKIENSHLKEIGIKLTKQIKTEEEKLKYYKEKLHLFSYDKDFFNK
                     KINNLSKNLTINEIKFSQENKNFIHYNYVSLSLNGDFKDLLNFIQNLENLPIALKIDK
                     IKLYNTQ"
BASE COUNT          393 a          118 c           69 g          278 t
ORIGIN      
        1 acaagaagaa atttctaaac taaaacaaga taagcaaaaa ttattaacaa acatacaaga
       61 tttaaacttt actctttcta ataaaatatc atctacacaa caacaatttc atattttatc
      121 caccataaca aaagaaatca atttagacaa aaataaagca atcattctaa atcaaatcat
      181 atcatggctt aattccaatg aacttaaaat tacaaatctt gaatttaaac aaacaaaaat
      241 cattctttct tttatcgatg aaaaccactt taaaaaagca ttagaaaatc taaatttaac
      301 ttttaaaatt cttgataaaa atgaagaaac atttaatatc atattagaag tcatacatga
      361 ataaaataga agtatttttg caaaatctca atcctaggga aaaatttctt tttatttctt
      421 ttatctgcct ttgtgctttg tttttagctt ttaaaattca cgatcacttt ttggaaaata
      481 tttttcaaaa aacattagta gaacataatt accttgcatt aaatgaagca aaaatagaaa
      541 attcacatct taaagaaata gggataaaac taacaaaaca gataaaaaca gaggaagaaa
      601 aattaaaata ctataaagaa aaattgcatt tattttctta tgataaagat tttttcaata
      661 aaaaaatcaa taatttatcc aaaaatttaa ccattaatga aataaaattt tcccaagaaa
      721 acaaaaattt tatccactat aattacgttt ctctaagttt aaatggcgac tttaaagact
      781 tgctcaattt tatacaaaat ttagaaaatc ttcctatagc tttaaaaatt gataaaataa
      841 aactatacaa tacacagg
//
LOCUS       DAPWGO010000146          854 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.148, whole genome shotgun sequence.
ACCESSION   DAPWGO010000146 DAPWGO010000000
VERSION     DAPWGO010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 854)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 854)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.148"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..>854)
                     /locus_tag="RJ336_001705"
     CDS             complement(<1..>854)
                     /locus_tag="RJ336_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDZ5214132.1"
                     /translation="RGLEQDNQAVKESVETVSVVESGNLTARITANPRNPQLIELKNV
                     LNKLLDVLQARVGSDMNAIHKIFEEYKSLDFRNKLENASGSVELTTNALGDEIVKMLK
                     QSSDFANALANESGKLQTAVQSLTTSSNSQAQSLEETAAALEEITSSMQNVSVKTSDV
                     ITQSEEIKNVTGIIGDIADQINLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQK
                     SLSEIEANTNLLVQSINDMAESIKEQTAGITQINESVAQIDQTTKDNVEIANESAIIS
                     STVSDIAN"
BASE COUNT          257 a          152 c          118 g          327 t
ORIGIN      
        1 ttattagcta tatcacttac tgtactagaa ataatagctg attcattagc aatttcaaca
       61 ttatctttag tagtttgatc aatttgagct acactttcat tgatttgagt gatacctgca
      121 gtttgttctt taatactttc tgccatatca ttgatagatt gaacaagtaa attagtatta
      181 gcttctattt cagataaaga cttttgagtt ctttcagcta actttctaac ttcatcagct
      241 accactgcaa agcctctacc atgttctcca gcacgagctg cttcaatagc tgcatttaaa
      301 gctaaaagat tgatttgatc tgcaatatca cctataatac ctgtaacatt tttaatctct
      361 tcagattgag tgataacatc actagtttta actgaaacat tttgcataga agaagtgatc
      421 tcttctaaag ctgctgcagt ttcttctaaa gattgagctt gagaatttga agaagtggtt
      481 aagctttgaa cagcagtttg taattttcca ctttcattag ctaaagcatt agcaaagtct
      541 gaactttgtt ttagcatttt aactatttca tcccctaaag cattagtagt taattctaca
      601 ctaccgctag cattttctaa tttatttcta aagtctaagc ttttgtattc ttcaaaaatt
      661 ttatgaatag cattcatatc agaacctact ctagcttgta aaacatcaag aagtttattt
      721 agaacatttt taagttcaat aagttgtggg tttcttggat tagcagtaat tcttgctgtt
      781 aaattaccac tttctacaac tgatactgtt tcaaccgatt ctttaacagc ttgattgtct
      841 tgttctaaac ctct
//
LOCUS       DAPWGO010000147          828 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.149, whole genome shotgun sequence.
ACCESSION   DAPWGO010000147 DAPWGO010000000
VERSION     DAPWGO010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.149"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            22..>828
                     /gene="yibB"
                     /locus_tag="RJ336_001706"
     CDS             22..>828
                     /gene="yibB"
                     /locus_tag="RJ336_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YibB"
                     /protein_id="HDZ5214133.1"
                     /translation="MIDNEITIVTAFYDIGRKDIKNFERDNDKYLSYFEFLAGIKNKM
                     IIYTQENIKEKILDTRKKHNLEDKTIIITKELQEFDEQGYKKIIDTFRNYDQSINRKN
                     PNNIECISPMYCYLMYLKPFFVCDAIQRGLTDEDIMWLDFGFNHGGNFFVDKDQFNFY
                     LQKQNSIDENKINLFSIKNDNKQTLANIYFSMETFLMGGIIFAKSKNWLLFKHHMQKC
                     IKYFTSFGIIDDDQIMLLWCARNYRKNYNIIKVYFWFDSLYHFIPQNIAKK"
BASE COUNT          358 a           79 c          106 g          285 t
ORIGIN      
        1 aatattattt aaggatgcaa tatgatcgat aatgaaatta cgatagtaac agctttttat
       61 gatataggta gaaaagatat taaaaatttt gaaagagata atgataaata tttatcttat
      121 tttgaatttt tagcaggtat caaaaataaa atgattatat acacccaaga aaatataaag
      181 gaaaaaattt tagatacaag aaaaaaacat aatttagaag acaaaaccat aataataacc
      241 aaagaattac aagaatttga tgagcaaggt tataaaaaaa taatagatac ttttagaaat
      301 tatgatcaaa gtataaatag aaaaaatcca aacaatatag aatgtatttc tcctatgtat
      361 tgctacctta tgtatttaaa accttttttt gtatgtgatg ctatacaaag aggtttgact
      421 gatgaggata taatgtggct tgattttggt tttaatcatg gaggaaattt tttcgtagat
      481 aaagatcaat ttaactttta tctacaaaaa caaaatagta tagatgaaaa taaaattaat
      541 ctcttttcaa taaaaaatga taataaacaa actttagcaa acatttactt ttccatggaa
      601 acatttttaa tgggtggtat tatattcgca aaatcaaaaa attggctctt atttaaacat
      661 catatgcaaa aatgtataaa atattttacc tcatttggaa taattgatga cgatcaaata
      721 atgcttttat ggtgtgctag aaattatcga aaaaattata acattataaa agtttatttt
      781 tggtttgatt ctttatatca ttttatacca caaaatattg caaaaaaa
//
LOCUS       DAPWGO010000148          822 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.150, whole genome shotgun sequence.
ACCESSION   DAPWGO010000148 DAPWGO010000000
VERSION     DAPWGO010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.150"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            315..662
                     /locus_tag="RJ336_001707"
     CDS             315..662
                     /locus_tag="RJ336_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214134.1"
                     /translation="MKKSILFASALLASSMLFADSLKLEGTIAQIYDNNKTLLIDSIY
                     GGQMAIKVLPNTEIEMDDCGIFGTDKDGTFKDLKVGNFLESKISYGTPATPNTQAIPV
                     ARKIEIQCYKKAY"
BASE COUNT          327 a          102 c           92 g          301 t
ORIGIN      
        1 tcctatcctt ttgtatcatt tttattcaat aataaaatgg atattttaag tccaacttat
       61 atgtgtttaa atttatagat ttttggaaaa aatatatttt ttaatgtaac tattttaaac
      121 aagaataaaa aataattttt aattattttt gataaagtat tcactctttt aaatttacaa
      181 ctagaagtaa cgattggtaa atatgataaa tcacataatc ttatcaaaac taaaaagtca
      241 aaatttttaa cttcacattc acttcactta aaaagtttat aatgttatca ctttacattg
      301 aaggagaaat aattatgaaa aaaagtattt tatttgcatc agcactttta gctagctcaa
      361 tgctttttgc agatagtcta aaacttgaag gtactattgc acaaatttat gataacaata
      421 aaaccttgct tattgactca atttatggcg gacaaatggc tataaaagtt ctaccaaata
      481 ccgaaataga aatggatgat tgtggtattt ttggaacaga taaagatgga acttttaaag
      541 acttaaaggt tggaaatttt ttagaaagta aaatttctta tggaacacct gctacgccaa
      601 atactcaagc tattccagta gctagaaaaa ttgaaattca atgttataaa aaagcttatt
      661 aatataaatc ccttaacaag ggatttataa aaatcattct ttactaaact acttcatcac
      721 tcttaaataa aaatttaaac tcttttttaa caagcaattt ataaaataac acttatattt
      781 tcatctaagg caaataatga aaaaatggat ttttattgtt tt
//
LOCUS       DAPWGO010000149          728 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.151, whole genome shotgun sequence.
ACCESSION   DAPWGO010000149 DAPWGO010000000
VERSION     DAPWGO010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 728)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.151"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            41..>728
                     /locus_tag="RJ336_001708"
     CDS             41..>728
                     /locus_tag="RJ336_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HDZ5214135.1"
                     /translation="MLENKCDWKISKADQNGNVYYYFPKDEDEFKEAVVKNGGMSVYV
                     YQEGKFIDEFHTKSQGDKWTSSILNYLKTMSKDGGIFYRYYKNCKFFAIPKNTFSKDD
                     FKIIKDNINNNIPLNQILYGPPGTGKTYHTIDKALEIFGENLESRDEKKAKFDEYARK
                     GQIVFTTFHQSYGYEEFVEGIKPVMNNEANSQEIQYKIKDGIFKDFCDKALVVKQNFN
                     FNQIKDDFLDH"
BASE COUNT          317 a           62 c          119 g          230 t
ORIGIN      
        1 tatataatta aaataaaaac aaaaaatcaa aaggcatgca atgctagaaa ataaatgtga
       61 ttggaaaata agtaaggcag atcaaaatgg taatgtgtat tattattttc caaaagatga
      121 agatgaattt aaagaagcag ttgtaaaaaa tggcggtatg agtgtgtatg tttatcaaga
      181 aggtaaattt atagatgaat ttcacacaaa aagtcaaggt gataaatgga cttcttctat
      241 tcttaattat ttaaaaacta tgagtaaaga tggaggaata ttttatagat attataaaaa
      301 ttgcaaattt tttgctatac caaaaaatac attttctaaa gatgatttta aaattataaa
      361 ggacaatata aataataata tacccttaaa tcaaattctt tatggacctc cagggacagg
      421 aaaaacttat catactatag ataaagcttt ggaaattttt ggcgaaaatt tagaaagtag
      481 agatgagaaa aaagcaaaat ttgatgagta tgcaagaaag ggacaaatag tatttactac
      541 ttttcatcaa agctatggat atgaagaatt tgtagaaggt ataaagcctg tgatgaataa
      601 tgaagcaaat tctcaagaaa tacaatataa aataaaagat ggaattttta aagatttttg
      661 tgataaggct cttgttgtaa aacaaaattt taattttaat caaattaagg atgatttttt
      721 agatcatt
//
LOCUS       DAPWGO010000150          717 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.152, whole genome shotgun sequence.
ACCESSION   DAPWGO010000150 DAPWGO010000000
VERSION     DAPWGO010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.152"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..>717
                     /locus_tag="RJ336_001709"
     CDS             <1..>717
                     /locus_tag="RJ336_001709"
                     /inference="COORDINATES: protein motif:HMM:NF013882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HDZ5214136.1"
                     /translation="LKIAKDRKEYMQNLCLKHNLDYEIIQAVDGKELDSDFVKNISDF
                     SLSEKYLGRTLSLGEIGCALSHKKCFERMFELNLNECLILEDDAYFDEKLNYILSLKD
                     KFPKDLELFLLGHYRQVYLDDGFRIESPFSLRYDYKIDDFYHAKRLVGGGNGTHGYYI
                     NKNGALKMYKYLEKIIFPYDHCTSNDNIINVYALYPVVITTDEIFGAQTYVQDDNKRR
                     YRKRSKISKYIKKIKNKIIFF"
BASE COUNT          291 a           55 c          118 g          253 t
ORIGIN      
        1 ttaaaaatag ccaaagatag aaaagaatat atgcagaatt tatgtttaaa gcataactta
       61 gattatgaaa tcatacaagc tgttgatgga aaagagttgg atagtgattt tgtaaaaaat
      121 attagtgatt tttctttatc ggaaaaatat ttaggtagaa ctttaagtct tggtgagata
      181 gggtgtgctt tatcccataa aaaatgtttt gaaagaatgt ttgagctaaa tttaaatgag
      241 tgtttgatat tggaagatga tgcttatttt gatgaaaaat taaattatat tttaagttta
      301 aaagataaat ttccaaaaga tttagaatta ttcttacttg gtcattatag gcaagtttat
      361 ttagatgatg gatttcgtat agaaagccca ttttctttaa gatatgatta taaaatagat
      421 gatttttatc atgcaaaaag attagttggt ggtggcaatg gaacccatgg atattatatc
      481 aataaaaatg gtgccttaaa aatgtataaa tacttagaaa aaataatatt tccatatgat
      541 cattgtacta gtaatgataa tataataaat gtatatgctt tatatcctgt tgttataact
      601 actgatgaga tatttggagc ccaaacttat gtgcaagatg ataataaaag aagatataga
      661 aaaagaagta aaatttcaaa atatataaaa aagataaaaa ataaaatcat atttttt
//
LOCUS       DAPWGO010000151          704 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.153, whole genome shotgun sequence.
ACCESSION   DAPWGO010000151 DAPWGO010000000
VERSION     DAPWGO010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.153"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..>704)
                     /locus_tag="RJ336_001710"
     CDS             complement(<1..>704)
                     /locus_tag="RJ336_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ5214137.1"
                     /translation="CMLERTEITAEFFNHDFGEFDKDIMFICAGVVHPKAIEYLKGRN
                     RKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAEN
                     GNSHPDDYQNSANYESQMYEHILTEAYGGKKEIKTHEFWIFFKQILEAMIIKYHITTY
                     NCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQS
                     IKHCRDFSKILSNDFE"
BASE COUNT          246 a          111 c           87 g          260 t
ORIGIN      
        1 ttttcaaaat cattgctgag tattttacta aaatctctac aatgtttaat actttgataa
       61 actttataat aagccttaag taaaaactca ttttgtttat ttaaacttaa aggttctaat
      121 ttttcaaaag gtttatttaa atctttatca agtaaattct cacaagccca taaaaaaggt
      181 ttttctatgg ttccttctat ccttgctcca ccttcggtgc agttgtaggt ggtgatgtga
      241 tacttaataa tcattgcttc taggatttgt ttaaaaaata tccaaaattc atgagtttta
      301 atttcttttt tcccaccata agcctcggtt aaaatatgtt catacatttg actttcataa
      361 ttagctgaat tttgataatc atcaggatga gaattgccat tttcagcata agctaaatcc
      421 tgtcctataa aaatgatgtt tttatgattg agtagaaccg aaagaaaata tgacatatgt
      481 gcaacgctag gtgtattgta taaaaaatca aaatatttaa gctttatata gattggaaaa
      541 tataaatatc ttggtatgat aagatatttt ctatttctac cctttaaata ctcaatcgcc
      601 tttggatgaa caacaccagc acaaataaac ataatatcct tatcaaattc cccaaaatca
      661 tgattaaaaa actcagcagt aatttcagtt ctttctagca taca
//
LOCUS       DAPWGO010000152          695 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.154, whole genome shotgun sequence.
ACCESSION   DAPWGO010000152 DAPWGO010000000
VERSION     DAPWGO010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 695)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.154"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            2..>695
                     /gene="ung"
                     /locus_tag="RJ336_001711"
     CDS             2..>695
                     /gene="ung"
                     /locus_tag="RJ336_001711"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDZ5214138.1"
                     /translation="MEEITINIDKIKINDDWKEFLRDEFQKKYFLEIKKQYLNAINQN
                     IIIYPPANLIFNAFNLCPLKEIKIIILGQDPYHQPNQAMGLSFSVPKNVKIPPSLNNV
                     FKELQNDLNITPAKSGDLSSWAKQGVLLLNSILSVEANKAASHSSWGWQEFSDAIIHK
                     LSNEKSGLVFMLWGNYAKNKEILIDNAKHLILKAAHPSPLARTGFLGCKHFSKANEFL
                     KKVGKIPIDWKIV"
BASE COUNT          274 a           95 c          110 g          216 t
ORIGIN      
        1 tatggaagaa attacaataa acatagataa gattaaaata aatgatgact ggaaagaatt
       61 tttaagagac gaatttcaaa aaaaatattt tctagaaatc aaaaaacaat acctaaatgc
      121 gattaatcaa aatataatta tttatccacc tgcaaattta atctttaatg cttttaattt
      181 atgtccttta aaagaaatta aaattattat cctaggacaa gatccttatc atcaaccaaa
      241 tcaagcaatg gggcttagtt tttcggttcc aaaaaatgta aaaatcccac caagtcttaa
      301 taatgttttt aaagaattgc aaaatgattt aaacatcacc ccagcaaaaa gcggagattt
      361 aagctcttgg gcaaaacaag gagttttgct cttaaattct attcttagcg ttgaagcaaa
      421 taaagcagct agccatagtt cgtggggttg gcaagaattt agtgatgcta taatacataa
      481 attaagcaat gaaaaatcag ggcttgtttt tatgctttgg ggaaattacg caaaaaacaa
      541 ggagattttg attgataatg ctaagcattt gattttaaaa gcagcccacc caagcccttt
      601 agctagaaca ggatttttag gttgtaagca tttttcaaag gctaatgaat ttttaaaaaa
      661 agttggtaaa attcctatag attggaaaat agttt
//
LOCUS       DAPWGO010000153          670 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.156, whole genome shotgun sequence.
ACCESSION   DAPWGO010000153 DAPWGO010000000
VERSION     DAPWGO010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.156"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            21..524
                     /gene="ctf"
                     /locus_tag="RJ336_001712"
     CDS             21..524
                     /gene="ctf"
                     /locus_tag="RJ336_001712"
                     /EC_number="1.16.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HDZ5214139.1"
                     /translation="MLSKEVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLF
                     AHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFKSLLDVFEKTYEHEQFITKSIN
                     TLVEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYIKN
                     IALSRKK"
BASE COUNT          252 a           97 c          104 g          217 t
ORIGIN      
        1 attttaataa ggagataaga atgctttcta aagaagttgt aaaattactc aatgaacaaa
       61 taaacaaaga aatgtatgca gcaaacttat atcttagtat gagttcttgg tgctatgaaa
      121 acagtcttga tggagctgga gccttcttgt ttgcacatgc aagcgaagaa agcgatcatg
      181 ctaaaaagct tatcacttat cttaatgaaa cagattctca tgtagagctt caagaagtaa
      241 aacagcctga acaaaatttc aaatctttac ttgatgtttt tgaaaaaacc tatgaacatg
      301 agcaatttat cacaaaatca atcaatactt tagttgaaca catgctaaca cataaagact
      361 attctacttt taatttctta caatggtatg taagcgaaca acacgaagaa gaagcacttt
      421 tccgcggtat agttgacaag attaagttaa tcggagaaca cggaaatgga ctttatttag
      481 ctgatcaata catcaaaaat attgcattaa gcagaaaaaa ataatctttg ccctactatg
      541 ggcaaatctc gctttggatt gaaggtatga cttatttttc tctagaattt agtattttaa
      601 tgatagcttt ttttgctatt tattggactt ttaaaaatga ttacaaaata caaaatattt
      661 taattttaat
//
LOCUS       DAPWGO010000154          654 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.157, whole genome shotgun sequence.
ACCESSION   DAPWGO010000154 DAPWGO010000000
VERSION     DAPWGO010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.157"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            30..440
                     /gene="perR"
                     /locus_tag="RJ336_001713"
     CDS             30..440
                     /gene="perR"
                     /locus_tag="RJ336_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HDZ5214140.1"
                     /translation="MELLQMLKKHELKATPQRLCVLKILKRHEHPNIDELYTEIKKEY
                     PSISLATVYKNLNTLQEQGLVVEINVLNQKTCYDIYEEEHIHVVCAKCGGIEDLSFKD
                     AKLYEYQEHLEKKIGNLVNHLSVCAYVDSCKKCH"
BASE COUNT          263 a           75 c           91 g          225 t
ORIGIN      
        1 tttacttaaa aaagcaagga ataaataaaa tggaattact acaaatgctt aaaaaacatg
       61 agttaaaagc tactccgcaa agactatgtg ttttaaaaat tttaaaaaga catgagcatc
      121 ctaatattga tgaattatat acagaaatta aaaaagaata cccttcaatc tctttagcga
      181 cggtttataa aaatcttaat actttacaag aacaaggttt agttgttgaa atcaatgttt
      241 taaatcaaaa aacttgttac gatatttatg aagaagaaca tattcatgtt gtttgcgcca
      301 aatgtggtgg tatagaggat ttaagtttta aagatgctaa gctttatgaa tatcaagagc
      361 atttagaaaa aaagataggc aatctcgtca atcatctgtc tgtttgtgct tatgttgata
      421 gttgcaaaaa gtgtcattaa gcaaaataag gttaaaataa cccatatatt ttaagggtta
      481 ttttaatggt ttatgaaatt caaaaaaact ttttactatc tgattgcact cttttagaga
      541 atttaaaaaa agataatata ccttttcgaa attctaaatt tgaaactttt tatactcaaa
      601 taacttcaaa tcatagtgtt aaatttcaaa gtttttgcaa tgaattttat aaaa
//
LOCUS       DAPWGO010000155          625 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.158, whole genome shotgun sequence.
ACCESSION   DAPWGO010000155 DAPWGO010000000
VERSION     DAPWGO010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.158"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..263
                     /locus_tag="RJ336_001714"
     CDS             <1..263
                     /locus_tag="RJ336_001714"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214141.1"
                     /translation="IGFFAIVCLCLYFNLEVKIIASAISAYAVSISLVLNAYSIFEKT
                     RADKFNLTMQLLSKWDEKHFIEARDYTREQQNIKEKKEMKKY"
BASE COUNT          267 a           61 c           85 g          212 t
ORIGIN      
        1 tgatcgggtt ttttgcaatc gtatgtttat gtttatattt taatttagaa gttaaaatta
       61 ttgcatctgc catttctgcc tatgcggtgt caatctcatt ggtgttaaat gcttattcta
      121 tttttgaaaa aacaagagcg gataaattta atttaacaat gcagttatta tctaaatggg
      181 atgaaaaaca ttttatagag gcaagagatt atacaagaga gcaacaaaat ataaaagaaa
      241 aaaaggaaat gaagaaatat taaaagaaat taaagaaaaa ccagaattaa aaagatcaat
      301 tataatgatg atgaattatt ttgaaacact tcaaactttt attgaaaata ataggataga
      361 tgaaggtatt ataatggagc attttgcaca tatgttaaaa gatatcttgg aaaggtatga
      421 ttgttactta aatagcgatg atttcaaaaa aaataatccc ttggggctta aaaaacttat
      481 aaaattaaaa aatagatgca atacctatat atcataattt aatttaaaaa ataatgtagc
      541 tatatttaca aacctaaaac taaatatagc tatatatttc tataaaagtt aatcactctt
      601 tatatttatc ttttaaaaaa catta
//
LOCUS       DAPWGO010000156          601 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.159, whole genome shotgun sequence.
ACCESSION   DAPWGO010000156 DAPWGO010000000
VERSION     DAPWGO010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.159"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..213)
                     /locus_tag="RJ336_001715"
     CDS             complement(<1..213)
                     /locus_tag="RJ336_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDZ5214142.1"
                     /translation="MGFRINTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADD
                     ASGMAIADSLRSQAATLGQAINNGNDA"
     gene            complement(361..>601)
                     /locus_tag="RJ336_001716"
     CDS             complement(361..>601)
                     /locus_tag="RJ336_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDZ5214143.1"
                     /translation="TNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDFA
                     SESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ"
BASE COUNT          187 a          107 c          102 g          205 t
ORIGIN      
        1 ggcatcatta ccattgttta tagcttgacc taaagtggct gcttgtgaac gcaaagaatc
       61 tgctatcgcc atccctgaag catcatctgc tgcggagttg attctaagac ctgaactaag
      121 tctacttaaa gacttatcca gctctctagc attaacaact gaatttgcat gtgcgtttaa
      181 tgcaccgatg ttagtgttta tcctaaaacc cattttaaat cctttcaaaa tattgcatcg
      241 aaaagattaa agcaagaagt gttccaagtt ttagtttaat taaaaattct agagtttaaa
      301 ataaaaaaag cctagtttta aaaactaggc ttggatttgt atatattgca gattttcaaa
      361 ctactgtagc aatcttaaaa cattttgttg aacagaatta gcctgtgcca tagcataaga
      421 accactttga gctaagatat ttgctttaga gtagtttgca ctctcacttg caaagtccac
      481 atcacgaatt tgtgattcag ctgctttaac gtttacttga gtaacagtaa tgttgtttat
      541 cgttgatgta acttgatttt gcactgaacc aatgtcagct ctgatttgat caagatttgt
      601 t
//
LOCUS       DAPWGO010000157          594 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.160, whole genome shotgun sequence.
ACCESSION   DAPWGO010000157 DAPWGO010000000
VERSION     DAPWGO010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 594)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.160"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            88..582
                     /gene="cetC"
                     /locus_tag="RJ336_001717"
     CDS             88..582
                     /gene="cetC"
                     /locus_tag="RJ336_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetC"
                     /protein_id="HDZ5214144.1"
                     /translation="MKEIVLSENALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKS
                     HNIVRHEDMPRTVFKCLWDYIQKGDEIFAFVKNKAKDGNFYWVFANVSASFDTNGNII
                     NYYSVRRAPNRKSLSIIEEVYKILLEKEKKSGINAGVSALMDIVSSYKMTYNELIFNL
                     QENN"
BASE COUNT          212 a           57 c           90 g          235 t
ORIGIN      
        1 attttgcaat tcagtttgct ttttgttatt tattattggt aataattcta tttttgattt
       61 atttgtttta ttgggatgtt ttaaattatg aaagaaatag ttttgtctga aaatgcttta
      121 attacttcta aaacagatct taaggggaat atcatttatg ccaataatga ctttttaaaa
      181 tacgcaggtt ataaagttga tgaacttttg tataaatctc ataatatagt aagacatgaa
      241 gatatgccac gcactgtatt taaatgtctt tgggattata ttcaaaaagg agatgaaatt
      301 tttgcatttg tgaaaaataa agccaaagat ggtaattttt actgggtttt tgcaaatgta
      361 agtgcttcat ttgatactaa tggaaatatc atcaattatt attctgttcg tcgtgcaccc
      421 aatagaaaat ctctttctat aattgaagaa gtttataaaa ttttacttga aaaagagaaa
      481 aaatcaggta ttaatgctgg agtttcagct ttaatggata ttgtaagttc ttataaaatg
      541 acttataatg aacttatttt taacttacaa gaaaataatt aaataagata tatt
//
LOCUS       DAPWGO010000158          594 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.161, whole genome shotgun sequence.
ACCESSION   DAPWGO010000158 DAPWGO010000000
VERSION     DAPWGO010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 594)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 594)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.161"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            79..>594
                     /locus_tag="RJ336_001718"
     CDS             79..>594
                     /locus_tag="RJ336_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDZ5214145.1"
                     /translation="MNLWDKKAKTYARYQNTLNTIQKQTFEYLQNLNISFQNKSIIDI
                     GCGTGVWTLHLAKEAKEILALDSANTMLEILQEDAKKLNLNNIKCENLSFETWMQNNP
                     NVKFDLAFLSMSPALQNEKDYTNFLNLAKIKIYLGWADYRKSDFLDPILKYFNTEFKG
                     FYKKDLENYLLE"
BASE COUNT          246 a           68 c           80 g          200 t
ORIGIN      
        1 tagtcattca agcccaaaaa agggcttgaa ttttaaaaat ttatgctatg attttatata
       61 ttttatcaag gaaaatatat gaatttatgg gataaaaagg ccaaaactta cgcaagatat
      121 caaaacactt taaacaccat acaaaagcaa acttttgaat atttacaaaa tttaaatatt
      181 tcttttcaaa ataaaagcat tatagatata ggatgtggaa ctggggtttg gactttacac
      241 ttagctaaag aagctaaaga aattttagcc ctagatagtg caaatactat gcttgaaatt
      301 ttacaagaag atgctaaaaa actaaatctt aacaatataa aatgcgaaaa tttgagcttt
      361 gaaacttgga tgcaaaacaa tcctaatgtt aaatttgatc ttgcattttt aagtatgtct
      421 cctgctttac aaaatgaaaa agattataca aatttcttaa atctagccaa aataaaaatt
      481 tatcttggtt gggctgatta tagaaaaagt gattttttag atccgatttt aaaatatttt
      541 aatactgaat ttaaaggttt ttataaaaaa gatttagaaa attatttact agaa
//
LOCUS       DAPWGO010000159          512 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.162, whole genome shotgun sequence.
ACCESSION   DAPWGO010000159 DAPWGO010000000
VERSION     DAPWGO010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.162"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..>512)
                     /locus_tag="RJ336_001719"
     CDS             complement(<1..>512)
                     /locus_tag="RJ336_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ5214146.1"
                     /translation="KSVANMSYLLTEYLNYKNIILIGQDLAYAKDGFSHTKDYKNLDK
                     HEGHFQRDKGKFQCLAYGGNGKVESSRIWTMFRLIFENDINYFQKLFNITTYNCTEGG
                     ARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRD
                     FSKILSNDFE"
BASE COUNT          167 a           80 c           57 g          208 t
ORIGIN      
        1 ttttcaaaat cattgctgag tattttacta aaatctctac aatgtttaat acttttacaa
       61 actttataat aagccttaag taaaaattca ttttgtttat ttaaacttaa aggttctaat
      121 ttttcaaaag gtttatttaa atctttatca agtaaattct cacaagccca taaaaaaggt
      181 ttttctatgg ttccttctat ccttgctcca ccttcggtgc agttgtaggt ggtgatatta
      241 aataattttt gaaaataatt aatatcattt tcaaaaatta gtcgaaacat agtccaaatt
      301 ctagaacttt caacttttcc gttacctcca taagctaaac attgaaattt acccttatct
      361 ctttgaaaat gtccttcatg tttatcaaga tttttataat ctttagtatg ggaaaatcca
      421 tcttttgcat aagctaaatc ctgtcctatg agaataatgt ttttatagtt taaatattct
      481 gtaagtaggt agctcatatt tgctacactt tt
//
LOCUS       DAPWGO010000160          477 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.164, whole genome shotgun sequence.
ACCESSION   DAPWGO010000160 DAPWGO010000000
VERSION     DAPWGO010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.164"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            24..443
                     /locus_tag="RJ336_001720"
     CDS             24..443
                     /locus_tag="RJ336_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HDZ5214147.1"
                     /translation="MKKILLLGALFAVNLWAVNDIEVKNAFVKQTPPHAQNSAIFLTI
                     FNNTDKDIALISAKSDISEVSELHTHIHKDGKMMMQKIPEIIIKAHSSTELKSGGYHI
                     MLLKLKKPIIKDTKVNLDLKFNNHKIIELKNIDSKEF"
BASE COUNT          197 a           60 c           64 g          156 t
ORIGIN      
        1 tattataaaa ataaggatac aatatgaaaa aaattcttct cttaggtgct ctttttgctg
       61 taaatctttg ggctgttaat gatatagagg taaaaaatgc ctttgtaaaa caaactccac
      121 ctcatgcaca aaatagtgct atttttctta ccatttttaa taatactgat aaggatattg
      181 ctctaataag tgccaaaagc gatatcagtg aagtcagtga actgcataca catatacata
      241 aagatggaaa aatgatgatg caaaaaattc ctgaaattat tataaaagct cattcaagca
      301 cagagcttaa atcaggaggt tatcatataa tgcttttaaa actaaaaaaa cctattatta
      361 aagacacgaa ggtaaattta gatttaaaat ttaataatca taaaatcata gagttaaaaa
      421 atattgattc taaagaattt taattaatga gaaaaattat ttttatccta gcttttg
//
LOCUS       DAPWGO010000161          440 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.165, whole genome shotgun sequence.
ACCESSION   DAPWGO010000161 DAPWGO010000000
VERSION     DAPWGO010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.165"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            67..270
                     /locus_tag="RJ336_001721"
     CDS             67..270
                     /locus_tag="RJ336_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDZ5214148.1"
                     /translation="MLLNTPCRGIVDTNFESKRINITSTLKFQEKKEKVEAKAEKEEA
                     NKDNSDSTNTDTNKKDKLLDISA"
BASE COUNT          210 a           57 c           51 g          122 t
ORIGIN      
        1 tacgatttat aatataatca aaaattacaa cttaaaaagc tattgcaatt atataggagt
       61 ttgctaatgt tacttaatac accttgtagg ggaatagtag atacaaattt tgaaagtaaa
      121 agaattaata taacttcaac tttaaaattt caagaaaaaa aagaaaaagt agaagctaaa
      181 gctgagaaag aagaagcaaa taaagacaat agcgattcta caaacacaga taccaacaaa
      241 aaagataaac ttttggatat atctgcttaa tctaaaatat gctataatca tctccttgaa
      301 gaatacacaa taaatgattt tttgattttt attaagcttt taaaacacta aaaaatgaaa
      361 aattaaaaat acaaaaacaa tatcccaaag tgcatagctt agaagaaaac cttgcgatac
      421 ttaaaaacaa cccatattaa
//
LOCUS       DAPWGO010000162          400 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.166, whole genome shotgun sequence.
ACCESSION   DAPWGO010000162 DAPWGO010000000
VERSION     DAPWGO010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.166"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            <1..>400
                     /locus_tag="RJ336_001722"
     CDS             <1..>400
                     /locus_tag="RJ336_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDZ5214149.1"
                     /translation="KAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEEL
                     DNIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRIS
                     TSGEVQFTLKNYNGIDDFQFQKVVISTSVGT"
BASE COUNT          157 a           65 c           68 g          110 t
ORIGIN      
        1 ataaggctat ggatgagcaa cttaaaatct tagatacaat caaaactaag gcaactcaag
       61 cggctcaaga tggacaaagt ttaaaaacaa gaactatgct tcaagcagat atcaaccgtt
      121 taatggaaga acttgataat atcgcaaata ctacttcatt taacggtaaa caacttttaa
      181 gtgggaattt tatcaatcaa gaatttcaaa tcggcgcaag ttcaaatcaa actataaaag
      241 ctactatagg agcaacccag tcttctaaga taggtttaac acgctttgaa acaggaggaa
      301 gaatttcaac tagtggcgaa gtacaattta ctcttaaaaa ttacaatggt atagatgatt
      361 ttcagtttca aaaagttgtg atttcaactt cagttggaac
//
LOCUS       DAPWGO010000163          371 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.denovo.167, whole genome shotgun sequence.
ACCESSION   DAPWGO010000163 DAPWGO010000000
VERSION     DAPWGO010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.denovo.167"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(<1..>371)
                     /locus_tag="RJ336_001723"
     CDS             complement(<1..>371)
                     /locus_tag="RJ336_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDZ5214150.1"
                     /translation="VLYFYGFGNGVLFKALLQNKNHQHIVVFEKDIEIIWIMFHILDF
                     SHELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELN
                     KKLAENFKNSIVSHGNDPLDAL"
BASE COUNT          154 a           53 c           34 g          130 t
ORIGIN      
        1 agagcatcaa gaggatcatt accatgagaa acaatagaat ttttaaaatt ttctgctaat
       61 ttcttattta actccaaaac atcttcatga aatctttcat aataatgact catcagttct
      121 aaaaaataaa ttctagaaaa ttgaaagaaa ggtttaaaag aacaaagttc attataatct
      181 tgaatttcta gtttatttgt attcaaaact atcaatcttg cattttgcaa ttcatgtgaa
      241 aaatctaaga tatgaaacat tatccaaatg atttctatat ctttttcaaa aacaacaata
      301 tgttgatgat ttttattttg caataaagct ttaaataaaa ctccatttcc aaaaccataa
      361 aaatacaata c
//
LOCUS       DAPWGO010000164        24911 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.guided.013, whole genome shotgun sequence.
ACCESSION   DAPWGO010000164 DAPWGO010000000
VERSION     DAPWGO010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24911
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.guided.013"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            90..866
                     /gene="surE"
                     /locus_tag="RJ336_001724"
     CDS             90..866
                     /gene="surE"
                     /locus_tag="RJ336_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDZ5214151.1"
                     /translation="MKEILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSAC
                     SHSITLTKPLRFVKVGKRFYKLDDGTPADCVYLALHALYKKRLPDLVISGINKGANVG
                     EDITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDYKNALQITKKIIQNIFDKGFP
                     LEKKEFLNINFPAKSKIKGIKICKAGKRVYNFEAHSNVNPRGVEYYWLAAANLDFEDE
                     KNSDIALLKKGYATITPIMLDLTAYEKMKKVKKWLKANDE"
     gene            856..1515
                     /locus_tag="RJ336_001725"
     CDS             856..1515
                     /locus_tag="RJ336_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDZ5214152.1"
                     /translation="MMNDRFTRIKWLVGEEKFQKISQTKVLVCGLGGVGGICVDALYR
                     SGFKNLTLIDADKFEITNQNRQIHSENIGEEKAKVFERIYKVKGIVSKIDENFLKNFD
                     LSEFDLIIDAIDDIPAKVALAHLIDFKKQIFISSTGGARKLDPTRIKTTSIFKTHGDA
                     LAKKFRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLALRKVLAKK
                     S"
     gene            1499..1957
                     /locus_tag="RJ336_001726"
     CDS             1499..1957
                     /locus_tag="RJ336_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDZ5214153.1"
                     /translation="MLRKADIKDLNACLSLFEQSVKTLCAKDYTKDQICAWIKIDRQQ
                     WEEKFKYDEIFVYEKRGKIASFISVKQEQKLLDLLFTHPDFVRQGLAQNLLDFILKTY
                     LHNEIYTFASLSAKDFFLKNGFELIRENKVIKEGQNLKKFLMKKDVVYKN"
     gene            complement(2067..2447)
                     /locus_tag="RJ336_001727"
     CDS             complement(2067..2447)
                     /locus_tag="RJ336_001727"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDZ5214154.1"
                     /translation="MNITLLKSKIHRASVTEARLDYIGSISIDEKLLQASGILEYEKV
                     QVVNVNNGARFETYTIATQEEGVVCLNGAAARLAEVGDKVIIMSYADFNEEEAKTFKP
                     KVVFVDENNTATKITNYEKHGAIF"
     gene            complement(2444..3292)
                     /locus_tag="RJ336_001728"
     CDS             complement(2444..3292)
                     /locus_tag="RJ336_001728"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDZ5214155.1"
                     /translation="MQVITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA
                     KTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMYLKNF
                     STYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMV
                     DDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLAISQSIFLAEKLVREGEKN
                     TSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNF
                     LVQGLK"
     gene            complement(3303..4127)
                     /gene="panB"
                     /locus_tag="RJ336_001729"
     CDS             complement(3303..4127)
                     /gene="panB"
                     /locus_tag="RJ336_001729"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDZ5214156.1"
                     /translation="MRKSMISFLEKKAKNEKITMVSAYDYHSARILDNSDIDIILVGD
                     SLAMTVLGMQDTLSVTMDEMLIFTKAVSRGAKKSFVLADMPFMSYQSSDRDAILNASR
                     FIKESHANGVKVEGGIEIASKIKLISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQS
                     AQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHD
                     LLGLNKDFKAKFVKHFDKIDPQVGVEKYRDEVKSGIFPSQEHSFDYLDDELLDKLY"
     gene            4347..5120
                     /locus_tag="RJ336_001730"
     CDS             4347..5120
                     /locus_tag="RJ336_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-61 family class D beta-lactamase OXA-193"
                     /protein_id="HDZ5214157.1"
                     /translation="MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWAS
                     NDFSRAMETFSPASTFKIFNALIALDSGVIKTKKEIFYHYRGEKVFLSSWAQDMNLSS
                     AIKYSNVLAFKEVARRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAIL
                     LFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDEN
                     KYKAFALNLDIDKFEDLYKREKILEKYLDELVKKVKNDG"
     gene            complement(5205..6089)
                     /locus_tag="RJ336_001731"
     CDS             complement(5205..6089)
                     /locus_tag="RJ336_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HDZ5214158.1"
                     /translation="MIRIDINHPINTAKGRLDLNFKKDIESGKITALFGESGAGKTTL
                     LKIIAGLIKPKLGRIEVDNELWFDSSKNFSLALQKRKIGFVFQDYALFPNMNVKENIA
                     YATSSKAKVSELLALMGLENLAKIYPKHLSGGQAQRVALARALAREPKILLLDEPLSA
                     LDFKMRANLQDELAKILEYFKISTLLVSHDLAEIYKLSHRILELKNGKIIKDFPKNEF
                     FTHSSISAKLRLSATLLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKAYQDIKIGDT
                     LLLSIKAFNPIIVGKLDK"
     gene            complement(6086..6760)
                     /gene="modB"
                     /locus_tag="RJ336_001732"
     CDS             complement(6086..6760)
                     /gene="modB"
                     /locus_tag="RJ336_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDZ5214159.1"
                     /translation="MLDPAFLQTLYLTFKLAFITTFILFFIGVFLAYLLSFVRFPFKT
                     ILQSFISLPLILPPSVLGFYLLVTFSANSFLGQVLKEYFNLSLVFSFEGLVFASLIFS
                     LPFMVNPLQSAFSSINPNLLDASYSLGKGKIYTLFRVILPNSKAGIFSACAMSFAHTV
                     GEFGVVMMIGGHKQGETLVASIAIYDELEILNYNLAHQYAFILFIFSFLVLFSLYFVN
                     KKMSFQ"
     gene            complement(6753..7154)
                     /locus_tag="RJ336_001733"
     CDS             complement(6753..7154)
                     /locus_tag="RJ336_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-pterin-binding protein"
                     /protein_id="HDZ5214160.1"
                     /translation="MNLIKGQICELLNQEDIVIVKILSKEVIFSILMLELKYLENLKI
                     GASVELLFKEHELCFSTSKTLLSVENSFLAKITKIKKGELLYQVFFDFKGNELSSIIT
                     KEKALELEICENQEWLCFVKANDIVLRSHSA"
     gene            complement(7151..7900)
                     /gene="modA"
                     /locus_tag="RJ336_001734"
     CDS             complement(7151..7900)
                     /gene="modA"
                     /locus_tag="RJ336_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDZ5214161.1"
                     /translation="MKKFIVFFGILFFVSCLNAQNLSIFVASSASKAMSEVKDEFLKT
                     HPEDKIELVFGASGKYYELLKQGREFDLFFSADTKYAKAIYDDKNALIKPKVYVLGVL
                     ALYSLDENLLQGGIENLKEKAGKITHLSIANPKVAPYGVAAKEVLENLGLNELLKDKI
                     VLGENISVPVLHVDSKNSDIAIVAYSLVSSINHPKGKAIIIDTKYFSPLEQSYVITKY
                     AKDKKLAFEFSEFIGSSKAKEIFKKYGFSTP"
     gene            complement(7951..8637)
                     /gene="bioC"
                     /locus_tag="RJ336_001735"
     CDS             complement(7951..8637)
                     /gene="bioC"
                     /locus_tag="RJ336_001735"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDZ5214162.1"
                     /translation="MNFLKAKDYEKHAKVQDFMGLKLCEILKDLKISHFEKVFEFGCG
                     RGEFSKKLQNFITFDEYLKNDILDFKENSNILIFDMNEISKQDLSKEKFDLIVSNATL
                     QWLDLKRILPSLRDMLNQNGILLLSTFAEQNLKEIKQSTGFGLNYFSLNELEQIFKVY
                     FNEVKITQELIKLSFDNALDVFRHLKLSGVNSLGFYPLNKGFLKEFEEKFQNKLTYHP
                     VFILCKNDIK"
     gene            complement(8634..9245)
                     /locus_tag="RJ336_001736"
     CDS             complement(8634..9245)
                     /locus_tag="RJ336_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDZ5214163.1"
                     /translation="MKYEFLCKNPDSKKLIVVFGGFASHPSHFSHLKSDKNVILFYDY
                     ENFDLNFDFKAFDELFLIAFSMGVCVANRLLKELNFKQKIAINGTNLGIDKSKGIHPT
                     IFKKTLQNFKLEHFKETLFKERKSLAKDFIFKDEKALKIELEKLFDFALTKQEENLLW
                     DKVYSSKEDEIFPPNALKNSFKNLIFLDEPHFAFFHFKTWDEL"
     gene            complement(9242..10384)
                     /locus_tag="RJ336_001737"
     CDS             complement(9242..10384)
                     /locus_tag="RJ336_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HDZ5214164.1"
                     /translation="MKLEKILQDLEQNHNLRTLTPLKHENKFVYKQDHKLLNLVGNDY
                     LYLASSKELKAEFLNTLKEQDLFFSSSSSRSLSGNFEIYEKLESFLKTKFKDKEILHF
                     NSGYHLNISCIAALSSVSKTLFLTDKFIHASMIDGLRLGRADFFRFHHKDMNHLESLI
                     QKHYENYENIIVLSEALFSMDGDFSDFKTLCELKRRYDKIKLYIDEAHSVGCFDEEGL
                     GLVKKLALENEVDFLVFTFGKALASMGACIICDEKYKKFFINKARAFIYSTALPPINV
                     AWTQFIFKKMPYFKKEREKLELLSTFFKSKLQEKNHIVLGDAYIICLLLGENKKALEI
                     SQKLQKAGFFAPAIKEPTVPKNTARIRFSLHAGLNTEELERIIELL"
     gene            10452..11735
                     /locus_tag="RJ336_001738"
     CDS             10452..11735
                     /locus_tag="RJ336_001738"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDZ5214165.1"
                     /translation="MQNQILKNLDLKHIWHPCTQMKDHETLPLIPIKKAKGVWLYDFD
                     DKAYMDCVSSWWVNLFGHCNEKIANAIKKQVDELEHVILAGFTHEPIIKLSARLCEKV
                     GRNFNKCFYADNGSSAIEVALKMSFHYHLNKGVKKSKFLSLSNSYHGETLGALSVGDV
                     ALYKDTYKALLLECLSTPVPQGKDYTKELEILKDILEKNASEICAFILEPLVQCAGNM
                     HMYEARFIDEAIKLCHKFGVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITG
                     GFMPLSVVLTRDEIYNAFYDTYESQKAFLHSHSYTGNTLACAAANAVLDIFEDENILV
                     KNQILSEFIKKEFSRLEKFDFLGNFRTCGMISAFDILSTKYKRVGLFVFQKALEKGLL
                     LRPLANTIYFMPPYIITKEQIVYVLESLEQIFKEF"
     gene            complement(11722..12327)
                     /locus_tag="RJ336_001739"
     CDS             complement(11722..12327)
                     /locus_tag="RJ336_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDZ5214166.1"
                     /translation="MQIYVSGIHTDVGKTHFSAAFCANFNYDYFKLIQAGTPTDSEFI
                     AKFSPKTKIFKEGIFLQTPASPHLGKIKEKLDYKALDIILPKSKNLLIELAGGLFSPM
                     DENYTMIDFVNIFKHPTILVAKYYLGSINHILLSIEALKQRNINLLALVMMGKKDILQ
                     DDFIKNYAKIPIINLDFFDENSILNKDFKEQMQEILQLKIP"
     gene            complement(12337..12651)
                     /locus_tag="RJ336_001740"
     CDS             complement(12337..12651)
                     /locus_tag="RJ336_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDZ5214167.1"
                     /translation="MEWFYLFLATACEIFGVVIMKELVSTKNKLYLLALIVCFGFSFT
                     FLSLSMQNIAMSVAYAIWTGAGTAGGVMIGVLFYKESKSFLKLFLITVIIACTVGLKF
                     LS"
     gene            complement(12654..12992)
                     /locus_tag="RJ336_001741"
     CDS             complement(12654..12992)
                     /locus_tag="RJ336_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDZ5214168.1"
                     /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWHYILTAIGV
                     CISFTCFLKACERLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSIIKLVLIVILLLSI
                     IALKWISKEA"
     gene            13126..13662
                     /locus_tag="RJ336_001742"
     CDS             13126..13662
                     /locus_tag="RJ336_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDZ5214169.1"
                     /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNE
                     FIKEVRKKTTLIFDVKVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPV
                     KITGTAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAG
                     VTMIDADRVAVVGVEKAR"
     gene            13659..14204
                     /locus_tag="RJ336_001743"
     CDS             13659..14204
                     /locus_tag="RJ336_001743"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDZ5214170.1"
                     /translation="MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFK
                     GELFKIGSSLLLLKPSTYMNNSGLSVKAVNDFYKCERMIVIHDDIDINLGALRFKKGG
                     SSGGHNGLKSIDTLCGNDYERVRIGVGKGENVISHVLGKFKSEEEITLSKVLEHAKKA
                     LLELIENDDLSAISSKYSLKA"
     gene            14206..15264
                     /locus_tag="RJ336_001744"
     CDS             14206..15264
                     /locus_tag="RJ336_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDZ5214171.1"
                     /translation="MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAAN
                     LDLLYVMFLSFSAVPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFL
                     WALFFCCIYIGMNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQ
                     NSAQNIKIFNINDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDF
                     SELKSLEGFKPKIIEGVASNSDYSISDALESFELFKAQNVNTDALKINLYKFVFTPFF
                     APFLMLIMYYFFPVIARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIV
                     VPIIILGCLSAYMYYKHR"
     gene            15308..16516
                     /gene="lysA"
                     /locus_tag="RJ336_001745"
     CDS             15308..16516
                     /gene="lysA"
                     /locus_tag="RJ336_001745"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDZ5214172.1"
                     /translation="MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAV
                     KANSNLSLLQMLANLDSGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEY
                     DILYINLESEAEMMLLESVAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEI
                     DIARKMYLYAKNSSFLEPVGVHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKF
                     FDIGGGLGVAYEKDECEPDLYNYAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVL
                     YEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILPYNQGEESLCDVVGGICESGDFFA
                     KARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQ
                     IALEEKFLKA"
     gene            16518..17285
                     /locus_tag="RJ336_001746"
     CDS             16518..17285
                     /locus_tag="RJ336_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HDZ5214173.1"
                     /translation="MFFLDVQGTLISDHDKSLIHGAKELIDFLNAKNLPYLIITNNTK
                     KLDFLEKLQQKGLVIKENAYIDPFSVLKHLLRPCKVAAFGADEFVKSLENLGFELDFV
                     NPSAVLVASYDDFKFKDFATMIELARREVRFIAMHETSIYKKDGRPYPGVGSIMAMLK
                     NAIDFEYEVVGKPSIAFYKEALNLIRRQNSKIDFEDIKIISDDFRGDLLKAKELGMKT
                     LLVLSGKISDTKGLDTDLLDGVYPSVFEFLKDLKCQI"
     gene            17273..18346
                     /gene="pheA"
                     /locus_tag="RJ336_001747"
     CDS             17273..18346
                     /gene="pheA"
                     /locus_tag="RJ336_001747"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HDZ5214174.1"
                     /translation="MPNLEEFRNKIDAVDDKILDLLNERMTYVKSIGELKQSSGGTIY
                     RPERERAIINRLKNANLGLLDQNAIEAIYQEIFAVSRNLEMPQTIAYLGPEGTYTHQA
                     ARSRFGAMSRYIALANIEDVFKELSNKEAKYGVVPIENNTEGAVGITLDCLGKYNELK
                     IFGEIYMDIHHSFVGINENLKEIKRIYSHPQGYNQCRKFLESHELSAIEFVPSKSTAN
                     AAYLASQDKYAAAICSKIAAKLYNVPVLFDKIEDNAANKTRFLILSDIKNPKMPNCKT
                     SILAHTAHKPGGLSFLLEQFKKENINLTKLESRPVKSKEFLHSFYIDFEGHIDDENVK
                     KALKDIQEIVWLGSYLSGEKDEI"
     gene            18336..19430
                     /locus_tag="RJ336_001748"
     CDS             18336..19430
                     /locus_tag="RJ336_001748"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDZ5214175.1"
                     /translation="MKFNEFLNHLSNYEPGKDIEVIAKEYGVKEVIKLASNENPFGTP
                     PKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHAKL
                     NSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHDLNEFKKLYEAHKDEIKLIFLCL
                     PNNPLGECLDASEVTKFIKGVDEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNV
                     LYLGTFSKLYGLGGLRIGYGIANANIINAFYKLRAPFNVSNLALKAAVAAIDDDEFTK
                     KTLENNFSQMQLYKEFAKKHNIKIIDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNL
                     KSYGLNAIRITIGTSYENEKFFTEFDKILR"
     gene            19482..21164
                     /gene="fliF"
                     /locus_tag="RJ336_001749"
     CDS             19482..21164
                     /gene="fliF"
                     /locus_tag="RJ336_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HDZ5214176.1"
                     /translation="MDFKNMLHQIGQLYQNLTRKQRIVIAASIVVVVGFLVFLALFRG
                     SGSNANNGYAVLVENVSPSSSAAIVAKLEQNNIPYKLESENKILVPQDQVYRQRMFIA
                     SEGLIKDSRVGFEAFDTQAFGATNEEQRVKYQRAIEGELARTIETLEPIRSAVVHIAF
                     PKDSVFTERQIPPTASVVVNVREGLKLTRKQIDGIKNIVSAAVPKLTKENVKISDQSG
                     VPLDEQEAYEDDLVRAQIKFKSDQEKALEDKIIENLAPFAGGMDKVKVSVNIDFDFSK
                     QESQSEIYDPNPIVRSEQTLNEERTGRKDPEIQGVPGAVSNIGPVEGLDNKGQIDTYK
                     KNQVTTNNELSKTITNTKKQFATVLRTSAAVTIDGKYQDVVDENGDVKSEYVPLTKEE
                     LASVESIVKNTINFSATRGDSVVVQNLPFHRESIRVESKVKTFYNRFVEPFIPPVKYF
                     IAAILLFIFYKKVIAPFTQKMLEDVAAQEEMQQGPNAVLDDAEDALEKFNAARKKVEE
                     QLGFGDNFNEDSIQYEVLLEKLRGLVSDKGEEIAALLQNLIQNDSEFGEKDM"
     gene            21164..22192
                     /gene="fliG"
                     /locus_tag="RJ336_001750"
     CDS             21164..22192
                     /gene="fliG"
                     /locus_tag="RJ336_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HDZ5214177.1"
                     /translation="MIKLSEEQKMVYDDLSMPEKVAIFLIQLGEDATTSVFSHMEIDV
                     ITEISRYIAMAKNVDRSVATAVLEEFYTLLQSNQYIKSGGLEYAKEILFRTFGPEIAN
                     KILEKLTKSMENNQNFAYLAQIKPQQLADFITKEHPQTIALILAHMDSIHAAETLEYF
                     SDELRAEVVIRMANLGDISPSIIKRVSAVLESKLESLTSYKVEVGGPRAVAEVLNRLG
                     QKASKSTITYIEQSDERLAETIKELMFTFDDIQKLSTQAIREILKVADKRDLMIGLKG
                     ASEELKQKFLANMSTRASEAFLEEMGFLGAVRVKDVEDAQRKVVEVVQKLAEQGLVQT
                     GDADEMIE"
     gene            22200..23030
                     /gene="fliH"
                     /locus_tag="RJ336_001751"
     CDS             22200..23030
                     /gene="fliH"
                     /locus_tag="RJ336_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HDZ5214178.1"
                     /translation="MVNRSNVISGGASDQHVVEGYRFKVISEFDNHTGEKKHTQTPDE
                     ENANISLNDEKAVEENQAIAPTQAVMETQIPTFQPSFVEDLLKKTDEMSSNIIKLQMQ
                     IESQENEFNNRLNSELENAKEKFAKEGYEKAKEEFQKELSDFKDKYLKSIAKLDNACE
                     NLENFIEKNEKELADTAIDIAKEVILKELELNSSKIAYALAKDLIGELKGASAIELKV
                     NAEDYEYLKEQFDQNAHIKISLDDAISKGSVVIISDAGNIESNLNSRLTKIKKMVNNE
                     "
     gene            23023..24870
                     /locus_tag="RJ336_001752"
     CDS             23023..24870
                     /locus_tag="RJ336_001752"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDZ5214179.1"
                     /translation="MSKKFAHTQEELEKLSLKELENLAASMREKIIQVVSKNGGHLSS
                     NLGAVELSIAMHLVFDAKKDPFIFDVSHQSYTHKLLSGKEEIFDTLRQINGLSGYTKP
                     SEGDYFVAGHSSTSISLAVGACKAIALKGEKRIPVALIGDGALSAGMAYEALNELGDS
                     KFACVILLNDNEMSISKPIGAISKYLSQAMATQFYQSFKKRIAKMLDILPDSATYMAK
                     RFEESFKLITPGLLFEELGLEYIGPIDGHNLGEIISALKQAKAMQKPCVIHAQTIKGK
                     GYALAEGKHAKWHGVGAFDIDSGESVKKSDAKKSATEIFSKNLLDLASKYENIVGVTA
                     AMPSGTGLDKLIEKYPNRFWDVAIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQ
                     VIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDEQMMQNI
                     MEYAYLHQGPIAFRYPRGSFILDKEFNPCEIKLGKAQWLVKNNSEIAFLGYGQGVAKA
                     WQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESLINN
                     FLQKYDLHVKVVSFEYEDKFIEHGKTSEVEKNLEKDVNSLLTKVLKFYH"
BASE COUNT         8886 a         3488 c         4149 g         8388 t
ORIGIN      
        1 atttatataa tttaaaatta aaatttttat actatgaagc tttaaaaaaa tatgctaaaa
       61 tccaaatttt atcttttgca aggaagacaa tgaaagaaat tcttatcact aatgacgatg
      121 gttatgaaag cgaaggactt aaaaaactca ttaagatgtt aacaaaagaa tttaaagcca
      181 agatcaccat agtagctcct gctagtgaaa aatcagcttg ttcgcactct ataaccctaa
      241 ccaaaccttt gcgttttgtt aaagtgggaa aaagatttta caaacttgat gatggcactc
      301 cagcagattg tgtttatctt gctttgcatg ctttatacaa aaagcgtttg cctgatcttg
      361 taataagtgg gattaataaa ggtgctaatg taggcgagga tattacctac tcaggaactt
      421 gcgcaggagc tatggaggcg gttttacaag gaattcctgc tatcgctctt tctcaatttt
      481 ataaaaaaag cgaaaaagaa ctagactata aaaatgcttt acaaattacc aaaaaaatca
      541 ttcaaaatat ttttgataaa ggttttcctt tggaaaaaaa agaattttta aatatcaatt
      601 ttcctgcaaa atcaaaaatc aaaggcatta aaatttgtaa agcaggcaaa agggtttata
      661 attttgaagc ccattcaaat gtcaatccga gaggagtaga gtactattgg cttgcagcgg
      721 cgaatttaga ctttgaagat gagaaaaata gcgatattgc cttacttaaa aaaggctacg
      781 ctacaataac acctataatg ctggatctta cagcttatga aaaaatgaaa aaagttaaaa
      841 aatggttaaa ggcaaatgat gaatgataga tttacacgta taaaatggct agttggagaa
      901 gaaaaatttc aaaaaatttc acaaacaaaa gttttggttt gcggacttgg tggagtgggt
      961 ggaatttgcg ttgatgcgct ttatcgtagt ggttttaaaa accttacttt aatcgatgcg
     1021 gataaatttg aaatcactaa tcaaaatcgc caaattcata gcgaaaatat aggcgaagaa
     1081 aaggctaaag tatttgaaag aatttataag gttaaaggta tagtcagtaa aatcgatgaa
     1141 aattttttaa aaaattttga tttaagcgag tttgatctta tcatagatgc cattgatgat
     1201 attcctgcaa aagtagcttt ggctcatctt atagatttta aaaaacaaat ttttatctcc
     1261 tcaacaggtg gagctagaaa gcttgatcca acacgcatta aaactacaag tatttttaaa
     1321 actcacggcg atgctttagc gaaaaaattt cgttatgagc ttagaaaatc aggctttaag
     1381 ggaaattttg atgtggtatt ttcagatgag gaagcgcatt gtaaagatct tggatctttt
     1441 atgggtgtga ctgcatcttt tggtttagcc ctagccagct tggcattaag aaaagttctt
     1501 gctaagaaaa gctgatatta aagatttaaa tgcttgtttg tcgctttttg agcaaagcgt
     1561 aaaaacactt tgtgctaagg attatacaaa agatcaaatt tgtgcttgga ttaaaattga
     1621 tagacaacaa tgggaagaaa aatttaaata tgatgagatc tttgtctatg aaaaaagagg
     1681 aaaaatcgca agttttataa gtgttaaaca agagcagaaa ttgcttgatt tgctttttac
     1741 tcatcctgat tttgttagac aaggtttagc acaaaattta cttgatttta ttttaaaaac
     1801 ttatttgcat aatgaaattt acactttcgc atccttaagt gctaaagatt tttttttaaa
     1861 aaatggtttt gaacttataa gggaaaacaa ggttatcaaa gagggacaaa atttaaaaaa
     1921 atttttaatg aaaaaagatg tggtttataa aaactagaag ttaagataag caaaaataat
     1981 ggattaaaag atataaaaat catttttttc tatcttagat aaatgaattt atctaagata
     2041 gaaaaaatta caaaaatagc tagatgttag aaaatagctc cgtgtttttc ataatttgtt
     2101 atttttgtag cagtgttatt ttcatccaca aaaacaactt ttggtttaaa tgtttttgct
     2161 tcttcttcat taaaatcagc ataagacatg atgatcacct tatctcccac ttctgcaaga
     2221 cgagccgcag caccatttaa gcatacaact ccttcttctt gcgtggctat ggtataggtt
     2281 tcaaatctag cgccattatt gacattgact acttggactt tttcgtattc taaaattcca
     2341 ctcgcttgca ataatttttc atctatactt atacttccta tataatcaag cctagcttct
     2401 gttacgcttg cgcgatgtat ttttgatttg agtaaagtga tattcatttt aatccttgta
     2461 ctaaaaaatt atcaatgagt cttgtttttc caacaaaagc agccaccgct cctaaaacat
     2521 tatcagtgat attttcgata ttttccatgg tgttaaaatc gactaattct atataatcga
     2581 ttttgattag tttttctttt tctaaaatat ctttcatagc ttggatgatc ttagaagtat
     2641 ttttttctcc ctctcggact aatttttcag ccaaaaaaat gctttgagat atagctagtg
     2701 acgcttttct ttcttctttg ctaagatata catttctaga gcttttggct aagccatctt
     2761 cttctctaat gataggacaa atttgaattt ttaaatcaaa atttaaatca tcaaccatat
     2821 gcctaacgac tacgcattgc tgcgcgtctt tttgccccat atagactata tcagggttta
     2881 ggatattaaa aaatttagtt aaaaccgtgc aaacgcctct aaaatgcccc ggtcttttag
     2941 ccccgcaaag tttatcagtg atcgtattca tatctacata ggtgctaaaa ttcttaagat
     3001 acatttgagt tgcatcgggg ataaaaacca tatcaacgcc attatcttga cacattttaa
     3061 tgtcgcgttc taaatctctt ggataactag aaaaatcttc attaggccca aattgcatag
     3121 gatttacaaa gatacttact ataaccttat cttgtgtttt ggcatgtttg actaaactta
     3181 aatgtccatc gtgtaaaaaa cccatggttg gaacatagcc tatactaagt tgatgtgatt
     3241 tccaatcttt tacaatttgt tttgcttctt tgacagaagt aatgacttgc atatttgtat
     3301 ccttagtata atttatctaa taattcatca tctaaataat caaagctgtg ctcttgggaa
     3361 ggaaaaatac cgcttttaac ttcatctcta tatttttcaa ctcctacttg aggatcaatt
     3421 ttatcaaaat gctttacaaa ttttgcttta aaatctttat ttaaacccaa aagatcgtga
     3481 taaactaaaa cttgtccatc gcagtatttg cctgaaccta tgccgattgt tggaatttct
     3541 aaaatagagc ttattttttg tgctagtttt acaggcacac attctaaaac caacatacaa
     3601 gcacccgcat cttgcacagc ttttgcatca tctataattt tttgggctga ttgtaaatct
     3661 ttaccttgaa ccctatagcc acctagcata tttacagctt gtggggttag tcctaggtga
     3721 gcaacgacgg gtattcctga ttgggaaatc aatttaatct tacttgcgat ttctataccc
     3781 ccttccactt ttaccccatt tgcgtggctt tctttgataa atcttgaggc atttaagata
     3841 gcgtcacgat ctgaactttg ataagacata aaaggcatat cagcaagtac gaaagacttt
     3901 ttagctccgc gagaaacagc tttggtaaaa atcaacattt catccatagt aacacttaaa
     3961 gtatcttgca taccaagtac cgtcatggct aatgaatctc caaccaatat aatatctata
     4021 tcgctattgt ctaaaattct tgcactatga taatcatacg cacttaccat ggttattttt
     4081 tcatttttgg cctttttttc caaaaaacta atcatacttt ttctcatttt gcatacctca
     4141 atttttagct ataaaataat aagcaaaaaa ctagcatata atttttcata aatagtaaat
     4201 gaatgataaa gtaagttata tttaatcgat ggattgcttt aatggttaca attttagaaa
     4261 atttcagttc atgttaaagg atatttaaag aaaataaagc tttaaaaagt attttgttta
     4321 aaattattta aatagaaaga tattttatga aaaaaataac tttattttta cttttcttaa
     4381 atttagtgtt tgggcaagat aagatattaa ataattggtt taaagagtat aatacaagcg
     4441 gcacttttgt tttttatgat ggaaaaactt gggcgagtaa cgatttttca agggctatgg
     4501 agactttctc tcccgcttcc acttttaaaa tttttaatgc tctaattgca cttgatagtg
     4561 gtgtgataaa aactaaaaaa gaaatttttt atcactatag aggtgaaaaa gtatttttat
     4621 cttcttgggc gcaagatatg aatttaagtt cagctataaa atattctaat gttcttgctt
     4681 ttaaagaagt ggcaagaaga attggtatca aaactatgca agaatattta aacaagcttc
     4741 attatggtaa tgctaaaatt tccaagatcg atactttttg gcttgacaac tcactaaaaa
     4801 taagcgctaa agaacaagca attttgcttt ttagactttc acaaaatagc ttaccttttt
     4861 ctcaagaagc aatgaatagt gttaaggaaa tgatttattt aaaaaatatg gaaaatttag
     4921 agctttttgg aaaaacaggt tttaatgatg agcaaaaaat tgcttggatt gtaggttttg
     4981 tgtatttaaa agatgaaaat aaatataagg ctttcgcgct aaatttagat attgataaat
     5041 ttgaagattt atataaaaga gaaaaaattt tagaaaaata tttagatgaa cttgtaaaaa
     5101 aagttaaaaa tgatggctag tgagtatttc gtaaaatgca aaaatactta attgtatgat
     5161 ttgcgtacac ttaaagtact cattaaaaaa ttaaattttt gctcttattt atcaagtttt
     5221 cctacgatga tagggttaaa ggcttttatg gatagcaaaa gcgtatcgcc gatttttata
     5281 tcttgataag cttttagaaa ttcctcttca ctaagagtga ttttaataat atcttgattt
     5341 aaaagcaagg ttaaaaccac taaaatatca ctttttttaa tttctagcaa agttgcactc
     5401 aaacgcaatt ttgcactaat acttgaatga gtaaaaaatt catttttagg aaaatcctta
     5461 atgatttttc catttttaag ctctaaaatt ctatgactta acttataaat ttcagccaaa
     5521 tcatgactga ctaataaagt acttatctta aaatactcta aaattttagc caattcatct
     5581 tgtaaattgg cgcgcatttt aaaatccaaa gcgcttaaag gctcatctaa aagcaaaatt
     5641 tttggttccc ttgctaaagc tcttgctagg gctacccttt gtgcttgtcc tccgcttaaa
     5701 tgtttaggat aaattttagc caaattttca agtcccatta aggctaaaag ctcgctaacc
     5761 tttgccttag aactagtggc ataggcaata ttttctttta cattcatatt tggaaaaagc
     5821 gcataatctt gaaaaacaaa accaattttt cttttttgta aagctaagct aaaatttttt
     5881 gaagaatcaa accaaagttc attatctact tctatacgcc ccaatttagg ctttataagt
     5941 cctgctatga tttttaaaag agtggttttt cctgctccac tttcgccaaa aagtgcagta
     6001 atttttcctg attctatatc ttttttaaaa tttaaatcca gtcttccttt agcagtattt
     6061 ataggatgat tgatatcaat tcttatcatt gaaaactcat ttttttattg acaaaataaa
     6121 gactaaaaag cactaaaaaa gaaaaaataa acaatataaa agcatattga tgggctaagt
     6181 tatagtttaa gatttcaagt tcatcgtaaa tagctatact agctactaaa gtttcacctt
     6241 gtttatgtcc tcctatcatc atcacgactc caaattcacc cacagtatga gcaaaactca
     6301 tcgcacaagc actaaaaatt cctgctttag aattaggtaa aatcactcta aaaagagtat
     6361 aaattttacc tttacctaaa ctataagaag catcgagcaa atttggattg atcgatgaaa
     6421 aggcactttg caaaggattt accataaaag gcaaagaaaa aatcaaagaa gcaaaaacaa
     6481 gaccttcaaa actaaaaacc aaagaaagat taaaatattc ttttaaaact tgccctaaaa
     6541 aactattagc cgaaaaagtt acaagcaaat aaaatcccaa aacgctagga ggtaaaatca
     6601 aaggcaaaga aataaagctt tgaaggattg ttttaaaagg aaaacgcaca aaacttaaca
     6661 aataagctaa aaatacacca ataaaaaaaa gaataaaagt cgtgataaaa gcaagtttaa
     6721 aagtaagata aagagtttgt aaaaaagctg gatcaagcac tatgactcct taatacaata
     6781 tcatttgctt ttacaaaaca aagccattct tgattttcac aaatttcaag ttctaaagct
     6841 ttttctttgg tgataatact agaaagttcg ttacctttaa aatcaaaaaa tacctgatac
     6901 aaaagttcgc cttttttaat ttttgtaatt ttagctaaaa aagaattttc aacacttaaa
     6961 agagttttac ttgtactaaa gcaaagctca tgctctttaa aaagaagttc tacactcgca
     7021 ccaattttta aattttctaa gtattttaat tcaagcatta aaatactaaa aatcacttct
     7081 ttggaaagta ttttaacaat aactatatcc tcttgattta aaagctcgca aatttgtcct
     7141 tttataaggt tcatggtgtg ctaaatccgt attttttaaa aatttctttt gcttttgaag
     7201 agccaataaa ttcgctaaat tcaaaggcta attttttatc cttagcgtat tttgtgataa
     7261 cataactttg ctctaaaggg ctaaaatact ttgtatcaat tataatagcc ttacccttag
     7321 gatgattgat agaagaaact aaagaataag ccactatagc tatatctgaa tttttgctat
     7381 ctacatgtaa aacaggcact gagatatttt cgcctaaaac gattttatcc ttaagaagct
     7441 catttaaacc caaattttca agcacttctt tagctgctac tccataagga gctactttag
     7501 gattggctat gcttagatgc gtgattttac ctgccttttc ttttaaattt tcaatgcctc
     7561 cttggagtaa attttcatcc aaactataca aagccaaaac tcctaaaaca taaacttttg
     7621 gctttattaa agcattttta tcatcataaa tagccttagc atatttagta tccgctgaaa
     7681 aaaagagatc aaattctctt ccttgtttta aaagctcata atattttcca gaagcaccaa
     7741 aaaccaattc tattttatct tctggatgtg ttttcaaaaa ctcatcttta acttcactca
     7801 tcgcctttga agctgaagaa gctacaaaaa tgcttaaatt ttgtgcattt aaacacgaaa
     7861 caaaaaacaa aatcccaaaa aatactataa actttttcat ttagttttcc ttgtgtaaaa
     7921 atttaatttt tggattataa cacaaaaaat tcattttata tcatttttgc ataaaataaa
     7981 tacaggatga taagtgagtt tgttttgaaa tttttcttca aattctttta aaaaaccttt
     8041 atttaaagga taaaaaccta aagaatttac cccgcttaat tttaaatgtc taaaaacatc
     8101 taaagcatta tcaaagctta attttatgag ttcttgagta atttttactt cattaaaata
     8161 gactttaaaa atttgctcta attcatttaa actaaaataa tttaaaccaa aacctgtgct
     8221 ttgtttgatt tcttttaaat tttgttctgc aaaagtagaa agaagtaaaa ttccattttg
     8281 atttagcata tccctaagac ttggtaaaat gcgttttaaa tcaagccatt gcaaagttgc
     8341 atttgaaaca ataagatcaa atttctcttt acttaaatcc tgttttgaaa tttcgttcat
     8401 atcaaaaatt aaaatattag aattttcttt aaaatctaaa atatcgtttt ttaaatactc
     8461 atcaaaggta atgaaatttt gaagtttttt actaaattca cccctaccac aaccaaattc
     8521 aaacactttt tcaaaatgtg aaatttttaa atcttttaaa atttcacaaa gttttaaacc
     8581 catgaaatct tgcacttttg catgtttttc ataatctttt gcttttaaaa aattcaaagc
     8641 tcatcccaag ttttaaaatg aaaaaaagca aaatgcggtt catctaaaaa aatcaaattt
     8701 ttaaaactat ttttcaaggc atttggcgga aaaatttcat cttctttact tgaataaacc
     8761 ttatcccaaa gcaaattttc ttcttgtttt gttaaagcaa agtcaaaaag tttttcaagc
     8821 tctattttca aagctttttc atctttaaaa ataaaatctt tggctaagct tttgcgttct
     8881 ttaaataaag tctctttaaa atgttctaat ttaaaatttt gcagggtttt tttaaaaatt
     8941 gtaggatgaa ttccttttga tttatctatg cctaaatttg tgccatttat ggctattttt
     9001 tgtttaaaat taagctcttt taaaagtcta tttgctacgc aaactcccat agaaaaagcg
     9061 attaaaaaaa gctcatcaaa agctttgaaa tcaaaattta aatcaaaatt ttcataatca
     9121 taaaataaaa tcacattttt atcgcttttt aaatgcgaaa aatgactagg atgtgaagca
     9181 aaccctccaa ataccactat aagttttttt gaatcaggat ttttgcataa aaattcatat
     9241 ttcataaaag ctctattatc ctttcaagtt cttctgtatt aagtcctgcg tgcaaagaaa
     9301 aacgaattct ggctgtattt tttggcacgg taggttcttt gatcgcagga gcaaaaaaac
     9361 cagctttttg aagtttttgt gaaatttcta aggctttttt attttcacct aaaagcaagc
     9421 aaataatata agcatcgcct aaaacgatgt gatttttttc ttgcaattta cttttaaaaa
     9481 aagtgcttaa aagctctaat ttttctcttt ctttcttaaa ataaggcatt tttttaaaaa
     9541 taaattgcgt ccaagctaca ttaataggtg gcaaggctgt agaataaata aaagctctag
     9601 ccttgttgat gaaaaatttc ttatattttt catcacatat tatacaagca cccatggaag
     9661 caagggcttt tccaaaggta aaaaccaaaa aatccacttc attttctaag gctagttttt
     9721 taacaagccc caaaccctct tcatcaaaac aacccacgct gtgtgcttca tctatataaa
     9781 gcttaatttt atcataacgc cttttaagct cacacagagt tttaaaatcg ctaaaatctc
     9841 catccatact aaacaaagct tcgcttaaaa cgatgatatt ttcataattt tcataatgtt
     9901 tttggattaa actctctaaa tgattcatat ctttatgatg aaaacgaaaa aaatcagccc
     9961 tgccaagtct taagccatca atcatacttg catgaataaa tttatcggtt agaaaaagcg
    10021 tcttagaaac gctagaaagt gctgctatac aagagatatt taaatgatag ccactattaa
    10081 aatgtaaaat ttccttatct ttaaatttag tctttaaaaa actttctaat ttttcataaa
    10141 tttcaaaatt tccactcaaa cttcttgaac tcgaacttga aaaaaacaaa tcttgttctt
    10201 ttagggtgtt taaaaactca gcttttaact ctttggaaga cgccaaataa agataatcat
    10261 ttcctactaa atttaaaagt ttgtgatctt gcttataaac aaatttattt tcatgtttta
    10321 aaggtgttag agttcttaga ttgtgatttt gctctagatc ttgcaaaatt ttttcaagct
    10381 tcattttttt cctgtaaatt taaaaattta aagtattatt ttgccaaaat atttttaaaa
    10441 aagaagttat aatgcaaaat caaatcttaa aaaatctcga tttaaaacac atttggcacc
    10501 cttgcacaca aatgaaagat cacgaaaccc tacctttaat tcctataaaa aaagcaaaag
    10561 gtgtatggct ttatgatttt gatgataaag cttatatgga ttgtgtgagt tcttggtggg
    10621 tcaatctttt tggtcattgt aatgaaaaaa tcgcaaatgc cattaaaaaa caagttgatg
    10681 agctagagca tgtgatctta gcaggcttta cacatgagcc cattatcaag ctttctgcaa
    10741 gactttgcga aaaagtaggc aggaatttta acaaatgttt ttatgcagat aatggatcaa
    10801 gtgctattga agtagcactt aaaatgagtt ttcattatca tttaaataag ggagtgaaaa
    10861 aaagtaaatt tttatcttta agcaattctt atcatggtga aaccttagga gccttaagtg
    10921 tgggcgatgt agcgctttat aaagatactt acaaagcctt gcttttagag tgtttaagca
    10981 cgcctgtgcc acaaggcaaa gactacacta aagagcttga aattttaaaa gatattttag
    11041 aaaaaaatgc aagtgaaatt tgtgctttta tacttgaacc cttggtacaa tgtgcaggaa
    11101 atatgcatat gtatgaagca aggtttattg atgaggccat aaagctttgc cataaatttg
    11161 gagtgcaagt gatttttgat gaaattgcag tgggctttgg acgcacagga actttgtttg
    11221 ccttacatca atgcaaacaa agccccgatt ttatctgcct ttcaaaaggg ataacgggtg
    11281 gatttatgcc actttctgta gtgcttacaa gagatgaaat ttataatgct ttttatgata
    11341 cttatgaaag ccaaaaggct tttttacatt ctcatagcta tacgggaaat accttagctt
    11401 gcgcggcagc aaatgcggtt ttagatatct ttgaggatga aaatatttta gtaaaaaatc
    11461 aaattttaag cgagtttatc aaaaaagaat tttcaagact tgaaaaattt gactttttgg
    11521 gtaattttag aacttgcggg atgatcagtg cttttgatat tttaagcacc aagtataaac
    11581 gcgtaggact ttttgtattt caaaaagcct tagaaaaagg tttgctttta agacctttag
    11641 caaatacgat ttattttatg cctccttaca tcatcacaaa agaacaaatc gtttatgtac
    11701 tagagagttt agagcagatt tttaaggaat tttaagttgt aaaatttctt gcatttgctc
    11761 tttaaaatct ttatttaaaa tgctattttc atcaaaaaaa tcaagattga ttataggaat
    11821 ttttgcataa ttttttataa aatcatcttg taagatatct tttttaccca tcattacaag
    11881 ggctaaaaga ttgatatttc tttgctttaa agcttcaatg ctaagcaaga tatgattaat
    11941 gcttccaaga tagtattttg ctaccaaaat cgtagggtgt ttgaaaatat tcacaaaatc
    12001 aatcatagtg taattttcat ccataggaga aaaaagccca cccgcaagct caataagtag
    12061 gtttttgctt tttggtaaaa tgatatctaa ggctttataa tcaagctttt ctttgatttt
    12121 tccaagatga ggagaagctg gagtttgcaa aaaaatacct tctttaaaaa tctttgtttt
    12181 tgggctaaat tttgcaataa actcactatc tgttggagtt cctgcttgaa tgagtttaaa
    12241 ataatcatag ttaaaattcg cacaaaaagc tgcactaaaa tgtgtttttc ctacatcagt
    12301 atgtattcca ctcacataaa tttgcacaaa aaatccttaa gaaagaaatt ttaaacctac
    12361 tgtacaagca ataatcacag tgattaaaaa aagttttaaa aaacttttac tttctttata
    12421 aaaaagtact cctatcatta ccccaccagc agttccagct cctgtccata tagcataagc
    12481 aacactcata gcgatatttt gcatacttaa acttaaaaaa gtaaaagaaa atccaaaaca
    12541 cactatcaaa gccaaaaggt aaagcttatt tttagtgctt acaagttctt tcatgatcac
    12601 cacgccaaaa atttcacaag cagtagctaa aaacaaataa aaccattcca tatttaagct
    12661 tccttgctta tccatttaag ggctataatg cttaaaagta aaatcactat aagcacaagt
    12721 ttaattatag aaacagcctc gttaaaaata aacatttcat ttaaaaccac cccaatagtg
    12781 ccaatgccta caaaaacact ataagtaata cttacttcaa gtctttcaca agcttttaaa
    12841 aagcaagtaa aagaaataca aaccccaatg gctgttaaaa tatagtgcca aatttctgta
    12901 gaatacttaa gtccactgac ccaaaaacat tctataatcc cgcctaagat tattaaaaac
    12961 caagctatat tgatattgaa tttttcattc acatgaagcc ttaaattaac ataatatttg
    13021 taaaacaaat tatatcttaa agaaattaaa agaagctata aatttacttt tccataagcc
    13081 aaaattagat ataatcaaag ctcatttttt aagaaaggat aaaagatgtt agaaggtatc
    13141 gttagagaga gtatcggtag aaaagctgct aaagctttaa aaagagatgg ttatctaatt
    13201 gcaaacatct atggaaaagg attagaaaac atcaatgccg cttttaaagt aaatgagttt
    13261 attaaggaag ttcgtaaaaa aactacttta atttttgatg taaaagtagg ttctcaaact
    13321 ttaagcgttg tagttgtgga ttatcaaaaa gatcctgtaa ctgcagaact taaacatgtg
    13381 gatttaaaag ttgcgcaaaa aggtgtgatt tctaaataca tggttccagt taaaatcaca
    13441 ggaacagcta taggtcttaa aaataaaggt gttttaattc aatcaaaaag aagattaaaa
    13501 gtaaaatgtg cagctgaaaa tttaccaaat ttcttcgaac ttgatgtaag taaacttgat
    13561 gtgggtgatg ctttacttgt tcgtgatatt gtagttcctg cgggagtaac tatgattgat
    13621 gctgatagag tagcggttgt aggtgtagaa aaagctagat gattttagtc gtagggcttg
    13681 gcaatatagg cgtagagtat gaaaataccc gtcataatgt cggttttatg ctaattgact
    13741 tacttttaaa agaaagcaat tttacaaatc ttacaaactc taaatttaaa ggagagcttt
    13801 ttaaaatagg ttcttcttta cttcttctta aacctagtac ttatatgaat aattcaggac
    13861 ttagcgtaaa agcagtgaat gatttttata aatgcgaaag aatgatagtt atccatgatg
    13921 atatagatat aaatttagga gccttgcgct ttaaaaaagg cggttcaagt ggtggacata
    13981 atgggcttaa aagcatagat actttatgtg gaaatgacta tgaaagagtg cgtataggag
    14041 tgggaaaggg tgaaaatgtg atttcccatg ttttaggtaa atttaaatcc gaagaagaaa
    14101 taactttaag caaagtttta gagcatgcaa aaaaagcttt gcttgagctt attgaaaatg
    14161 atgatttgtc tgctatatca tccaaataca gcctaaaggc ttaagatgtg gatatttttt
    14221 cgttttattt cagggattta tttaaaaaat ttttttatta tatttttttc tttacttggt
    14281 ttttattgcg gtattgattt gctcttaaat tttaaagatc taccaaaagc cgcaaatctt
    14341 gatttgcttt atgttatgtt tttatctttt tcggcagtgc cttatgtatt acccatttct
    14401 ttgatttttg ctttggtagt ttctttgatt tctatgatca gagcaaatga atttgtaagt
    14461 ctttatgcgt taggactgag tagaaattat gttattttat ttcctttttt atgggcttta
    14521 tttttttgtt gtatttatat aggaatgaat tttacttctt ttgcttatgc aaatgattat
    14581 aagagaaata ttttaaaaaa tggcactatt atgaatcaaa gtggagaagt gtttttgaaa
    14641 tttaacaata attttgttta tatttcaaag ataaacaatg gacaaaatag tgctcaaaat
    14701 ataaaaattt ttaatattaa tgatttaaat ttaagctctt ttgtaagtgc taaaaatgcc
    14761 cattttgaag gtgaaagttg gattttgcga gatggtaata ttacattatt acctaaaaat
    14821 tatgaacttg ctaatgatgg tttaaagata caagatttct ccgagcttaa atcacttgag
    14881 ggttttaaac caaagattat agaaggggtt gctagtaata gtgattattc aatatctgac
    14941 gcacttgaaa gttttgagct ttttaaggcg caaaatgtca atacagatgc tcttaaaatc
    15001 aatctttata aatttgtttt tactcctttt tttgcaccat ttttaatgct tattatgtat
    15061 tatttttttc ctgtaatagc aagatttttt aatcttgctt ttgtaacttt tatagctttt
    15121 gtagtgactt tgatgatttg gggagtcttg tttttgctta ctagattaag cgaaaatagt
    15181 gtgattgcaa gtgaaattgg cattgtagtg cctattataa ttttgggttg tttaagtgct
    15241 tatatgtatt ataagcatcg ataaattaag ctttgtgtag taaaattata aaaattaaag
    15301 gttaaatatg gattataaac aattaaagca agaatttaat actccttttt atatttacaa
    15361 ttttgatttc ataaaagagc gttttttaaa tctcaaagag gcttttaagg ctagaaaatc
    15421 tcaaattttt tacgctgtaa aagccaattc aaatttaagt ttgttgcaaa tgcttgcaaa
    15481 tttagatagt ggatttgatt gtgtaagtat aggcgaggta aagcgtgcct taaaagcagg
    15541 agcaaaagct tataagatta tttttagtgg agtaggaaaa accaaagaag agttaagaca
    15601 agctttagaa tatgatattt tatatattaa ccttgaaagc gaagctgaaa tgatgctttt
    15661 agaaagtgtg gctaaagaac ttaatctaaa ggcaagaatc agtattcgtg ttaatccaaa
    15721 tgttgatgca aaaactcatc cttatatttc tacaggatta aatgaaaata aatttggtgt
    15781 tgaaattgat atagcaagaa aaatgtatct ttatgcaaaa aattcatctt ttttagagcc
    15841 tgttggagtg cattttcata taggttcgca acttttagat atttctccta ttcatgaagc
    15901 agcaggcatt gttgcaaaac ttgtaagaga gttaaaagcc ttgcaaatcg atcttaaatt
    15961 ttttgatata ggcggtggct tgggtgtggc ttatgaaaaa gatgagtgcg aacctgatct
    16021 ttataattat gcacaaggta tattagcaca acttcatggg cttgatttaa ccataggaat
    16081 ggagcctgga aggtatttag ttgctaaaag tggagaattt gtttgttcag tactttatga
    16141 aaaacaaaat aaaaccaagc gttttgttgt agtagatgga gcgatgaatg atcttatacg
    16201 cccaagttta tacgaggctt atcatgaaat aatcttacct tataatcaag gcgaagagag
    16261 tttatgtgat gttgtaggtg gaatttgtga gagtggggac ttttttgcta aagcaaggtc
    16321 tttgcctagc actcaaagtg atgatataat ggttattaaa aatactggag cttatggttt
    16381 tagcatgagt agtaattaca atactcgtaa taaagtttgc gaattagccc ttgaagaagg
    16441 acaggtaaga ttgatccgtc aaagagaaaa ttttgaagat caaatcgctt tagaagagaa
    16501 atttttaaag gcttaaaatg ttttttttag atgttcaagg gactttaatt tctgatcatg
    16561 ataaatcttt aatccatggt gctaaagaac tgatcgattt tttaaatgca aaaaatcttc
    16621 cttatcttat catcactaac aatacaaaaa aacttgattt tttagaaaaa ttacagcaaa
    16681 aaggattggt tataaaagaa aatgcttata ttgatccttt cagcgtttta aaacaccttt
    16741 taagaccttg taaagttgcg gcttttggtg cagatgagtt tgtaaaaagt cttgaaaatc
    16801 ttggttttga gctcgatttt gtaaatccta gtgctgtgct tgtggctagt tatgatgatt
    16861 ttaaatttaa agattttgcc actatgatag aattggctag aagagaagtt agatttatag
    16921 ctatgcacga aactagtatt tataaaaaag atggtaggcc ttatcctggt gtaggtagca
    16981 ttatggctat gcttaaaaat gctattgatt ttgaatacga ggttgtgggt aagcctagca
    17041 ttgcttttta taaagaagct ttaaatttaa taagaagaca aaattcaaaa atcgattttg
    17101 aagatattaa aatcattagt gatgatttta ggggtgactt gcttaaggca aaagaacttg
    17161 gcatgaaaac cttgctagtt ttaagcggca agataagcga cacaaaaggg cttgatacgg
    17221 atttgcttga tggagtttat cctagtgttt ttgagttttt aaaggatcta aaatgccaaa
    17281 tttagaagaa tttagaaata aaatcgatgc ggttgatgat aaaattttag atcttttaaa
    17341 tgaaagaatg acttatgtta aaagtatagg tgagcttaag caaagtagtg ggggaactat
    17401 ttatcgtccc gagcgtgaaa gagccattat caatcgttta aaaaatgcaa atttaggact
    17461 tttagatcaa aatgccatag aggcaattta tcaagaaatt tttgcagttt caagaaattt
    17521 agaaatgcct caaactatag cttatttagg gcctgaagga acttatacac atcaagcagc
    17581 aagaagtcgt tttggtgcga tgagtcgtta tatagccttg gccaatatcg aagatgtttt
    17641 taaagagtta agcaacaaag aagcaaaata cggtgttgta cctatagaaa ataataccga
    17701 aggtgcagtg ggcattactt tagattgtct aggtaagtat aatgagctta aaatttttgg
    17761 cgaaatttat atggatattc atcattcttt tgtaggaatt aatgaaaatt taaaagaaat
    17821 caaacgcatt tattcgcatc cgcaaggtta taatcaatgt cgtaaatttt tagaaagtca
    17881 tgaacttagt gctatagaat ttgttccttc aaaatctaca gctaatgcag cttacctagc
    17941 ttcgcaagat aaatatgcgg cagcaatttg ctctaaaata gcggctaagc tttataatgt
    18001 gcctgtgctt tttgacaaaa tagaagataa tgcagccaat aaaacaagat ttttaatttt
    18061 aagcgatatt aaaaatccta aaatgccaaa ttgtaaaact tctattttag cacacacagc
    18121 acataaacct ggtgggctta gttttttatt agagcagttt aaaaaagaaa atatcaatct
    18181 tactaagctt gaatctcgtc ctgtaaaatc aaaagaattt ttacacagtt tttacataga
    18241 ttttgaaggg catattgatg atgaaaatgt aaaaaaagct ttaaaagata tacaagagat
    18301 tgtttggctt ggatcttatt tatcaggaga aaaagatgaa atttaatgaa tttttaaatc
    18361 atttaagcaa ttatgaaccc ggaaaagata tagaagttat tgccaaagaa tatggcgtta
    18421 aagaagtgat aaaattagca agtaatgaaa atccttttgg tacgccacca aaagctatag
    18481 aatgcttaag acaaaatgca aacaaagctc atctttaccc tgatgatagt atgatagaac
    18541 ttaaaagcac attggctcaa aaatacaaag ttcaaaatga aaatatcatc attggtgcag
    18601 gtagtgatca agtgattgaa tttgctatac atgctaagtt aaattctaaa aatgcttttt
    18661 tacaagctgg agttaccttt gctatgtatg aaatttatgc caaacaatgc ggtgcaaagt
    18721 gttataaaac tcaaagcatt actcatgatt taaatgagtt taaaaagctt tatgaagcac
    18781 acaaagatga aattaaactc attttcttgt gcttaccaaa taatccttta ggcgagtgtt
    18841 tggatgcaag tgaagtgacc aagtttatta aaggtgtgga tgaggattgt ttagttgtga
    18901 ttgatgcagc ttataatgaa tttgcaagtt ttaaagatag caaaaaacat ttagaacctt
    18961 gtgaattgat taaagaattt gacaatgtac tttatttggg aactttttct aaactttatg
    19021 gattaggagg cttacgcatt ggttatggta tagctaatgc taatattatt aatgcatttt
    19081 acaagcttcg tgctcctttt aatgtgagca atcttgcttt aaaagcagca gttgcagcaa
    19141 tagatgatga tgaatttact aaaaaaactt tagaaaataa tttttctcaa atgcagcttt
    19201 ataaagaatt tgccaaaaaa cataatatca aaatcattga tagttataca aatttcatca
    19261 cttatttttt tgatgaaaaa aatagtacag atttgtctga aaaattgctt aaaaagggta
    19321 taataataag aaatttaaaa agctatggtt taaatgctat acgcattact ataggaacat
    19381 cttatgaaaa tgaaaaattt tttacagaat ttgataagat tttaagatag ataaatcaaa
    19441 taaaaatatg taaaattcgc taaactaagg gatgagaatt aatggatttt aaaaatatgc
    19501 ttcatcaaat tgggcaactt tatcaaaatt taactcgcaa gcagcgtata gtgattgctg
    19561 catctattgt agtagtggtt gggtttttgg tttttttagc tttatttcgt ggaagtggta
    19621 gtaatgcaaa taatggatat gcagttttag ttgaaaatgt aagcccaagt tcttctgctg
    19681 caattgtagc taaacttgaa caaaataata ttccctataa attagaaagt gaaaataaaa
    19741 ttttagttcc acaagatcag gtttatcgtc aaagaatgtt tattgcaagc gaaggtctta
    19801 taaaagatag tcgcgtgggt tttgaagctt ttgatactca agcttttgga gctacaaatg
    19861 aagagcaaag ggtaaaatac caaagagcca tagaaggcga acttgcaaga actattgaga
    19921 ctttagaacc tattcgtagc gctgttgtac acatagcatt tcctaaagat agtgttttta
    19981 ctgaaaggca aattccgcct acagcttcag ttgttgttaa tgttcgcgaa ggcttaaagc
    20041 ttactagaaa acaaattgat ggtataaaaa atattgtttc agcggcagtt ccaaaactta
    20101 ctaaagaaaa tgttaagatt agtgatcaaa gtggtgtgcc tttagatgag caagaagcat
    20161 atgaagatga cttggttcgt gcgcaaatta aatttaaaag tgatcaagaa aaagctttag
    20221 aagataagat tatagaaaat ttagctcctt ttgcaggtgg tatggataaa gtaaaagtga
    20281 gtgtaaatat agattttgat ttttccaagc aagaatctca aagtgaaatt tatgatccaa
    20341 atcctatagt gcgtagtgag caaactttaa acgaggaaag aacaggtaga aaagatccag
    20401 aaattcaagg tgttccaggt gctgtttcta atataggtcc tgttgaagga cttgacaata
    20461 aaggtcaaat tgacacttat aaaaaaaatc aagttactac aaataatgaa ctttctaaaa
    20521 ctattacaaa taccaaaaaa caatttgcaa cagttttacg cacttcagca gctgtcacta
    20581 tagatggaaa atatcaagat gtggttgatg aaaatgggga tgtgaaaagc gaatatgttc
    20641 cattgactaa agaagagctt gcaagtgttg agagtatagt taaaaatact attaatttta
    20701 gcgctactag aggcgatagt gttgtagtgc aaaatttacc atttcatcgt gagtcgatta
    20761 gagttgagag taaagttaaa actttttaca atcgttttgt tgagccattt attccaccag
    20821 ttaagtattt tattgcagcg attttacttt ttatttttta caaaaaagtc attgctccat
    20881 ttactcaaaa aatgcttgaa gatgtcgcag cgcaagaaga aatgcagcaa ggtccaaatg
    20941 ctgttttaga tgatgctgaa gatgctttgg agaaatttaa tgcagcaagg aaaaaagttg
    21001 aagaacaact tggttttggg gataatttta atgaagattc tattcaatat gaggttttac
    21061 ttgaaaaatt gcgtggttta gtaagtgata aaggcgagga aattgcagca cttttacaaa
    21121 acttaattca aaatgatagt gaatttggcg aaaaggatat gtgatgataa agctaagtga
    21181 agaacaaaaa atggtctatg atgatttatc gatgcctgag aaggtagcga tatttcttat
    21241 acaacttggc gaagatgcaa caacttctgt gttttcacat atggaaattg atgtaattac
    21301 agaaatttca cgttatattg ctatggctaa aaatgttgat agatccgtag ctactgcagt
    21361 tttagaagaa ttttacactc tgcttcaatc aaatcaatat attaaaagtg gtggtttgga
    21421 atatgctaaa gaaatacttt ttcgtacttt tgggccagag attgcaaata aaattcttga
    21481 aaaactcact aaaagtatgg agaataatca aaattttgct tatttggcgc aaattaaacc
    21541 acagcaactt gcagacttta ttaccaaaga gcacccacaa accatcgctc ttattttggc
    21601 acacatggat tctattcatg cggcagaaac tttagagtat tttagtgatg aattaagggc
    21661 tgaggtggtt ataagaatgg caaatcttgg cgatatttct ccaagtatta ttaaaagagt
    21721 ttctgcagtg ctagaaagca agcttgaaag tcttacctct tataaggttg aagtgggcgg
    21781 cccaagagcg gtagcagaag tgcttaatcg tttgggtcaa aaagcaagca aatcaaccat
    21841 tacttatatt gaacaaagtg atgaacgctt agcagagact attaaagagc ttatgtttac
    21901 tttcgatgat atacaaaaac ttagcactca agctataaga gaaattttaa aagtagctga
    21961 taagcgtgat ttaatgatag gtttaaaagg tgcaagtgaa gagttaaagc aaaaattctt
    22021 agccaatatg tctacgcgtg caagcgaagc ttttcttgaa gaaatgggtt ttttgggtgc
    22081 tgtgcgtgtt aaagatgttg aagatgcaca aagaaaggtt gttgaagtgg tgcaaaaact
    22141 tgcagaacaa ggtcttgttc aaacaggcga tgcggatgaa atgatagagt aggtgagaga
    22201 tggttaatcg tagcaatgta atttctggtg gggcttctga tcagcatgtt gttgaaggat
    22261 atcgttttaa agttatttca gaatttgata atcatacagg tgaaaaaaaa catactcaaa
    22321 ctccagatga agaaaatgct aatatatctt taaatgacga aaaagcagtt gaagaaaatc
    22381 aagctattgc ccctacgcaa gctgttatgg aaactcaaat tccaacattt caaccaagtt
    22441 ttgttgaaga tttgcttaaa aaaacagatg aaatgtcaag caatattatt aaacttcaaa
    22501 tgcaaataga aagccaagag aatgaattta ataaccgctt aaattcagaa cttgaaaatg
    22561 ctaaagaaaa atttgccaaa gaaggttatg agaaagcaaa agaagaattt caaaaggaat
    22621 tgagtgattt taaagataag tatttaaaaa gtatagccaa actcgataat gcttgcgaaa
    22681 atcttgaaaa tttcatagaa aaaaatgaga aagaattagc agatactgct atagatatcg
    22741 ctaaagaagt aatcttaaaa gagcttgaac taaattcaag taagatagct tatgctttgg
    22801 ccaaagattt aatcggcgag cttaagggtg ctagtgcaat tgagcttaag gttaatgcag
    22861 aggattatga gtatttaaaa gagcaatttg atcagaatgc tcatattaaa ataagtcttg
    22921 atgatgcaat tagcaaagga agtgttgtta ttataagtga cgcaggcaat atagaatcca
    22981 atcttaactc tcgtctaact aaaattaaaa aaatggtgaa taatgagtaa aaaatttgcc
    23041 catactcaag aagagttaga aaagctaagt ttaaaagaat tagaaaattt agcagcatct
    23101 atgcgtgaaa aaatcataca agttgtgagt aaaaatggtg ggcatttaag ttcaaatttg
    23161 ggtgctgtag aacttagtat agcaatgcat ttggtttttg atgcaaaaaa agatcctttt
    23221 atttttgatg tgtcgcatca gtcttataca cacaagcttt taagcggaaa agaagaaata
    23281 tttgatactt taagacaaat caatggttta agtggttata caaaacctag cgagggagat
    23341 tattttgtag cagggcattc tagcacctct atttctttgg cagtaggtgc ttgtaaggcc
    23401 attgctttaa aaggtgaaaa gcgtattcct gttgctttga ttggagatgg tgctttaagt
    23461 gcgggtatgg cctatgaggc tttaaatgaa ttgggtgatt ctaaatttgc ttgcgtaata
    23521 cttttaaatg ataatgaaat gagtatttca aaaccaattg gagcaatttc aaagtatctt
    23581 tctcaggcta tggcaacgca gttttatcaa agttttaaaa agcgtattgc taaaatgttg
    23641 gatatattgc ctgatagtgc tacttatatg gccaagcgtt ttgaagagag ttttaaactt
    23701 attactcctg ggcttttgtt tgaagaatta gggcttgaat atatagggcc tattgatgga
    23761 cataatttag gtgaaattat ttctgcatta aaacaagcaa aagctatgca aaagccttgt
    23821 gtgatacatg ctcaaaccat aaaaggtaaa ggctatgctt tagctgaagg aaaacatgct
    23881 aaatggcacg gggtgggagc ttttgatata gatagtggag agagtgttaa aaaaagtgat
    23941 gctaaaaaat ctgctactga aattttttct aagaatttgc ttgatttagc ctcaaaatat
    24001 gaaaatattg ttggggttac agcggctatg ccaagtggaa caggtcttga taagcttata
    24061 gaaaaatatc caaatcgttt ttgggatgtg gctattgcag aacagcatgc agtaacttct
    24121 atggccgcta tggcaaaaga aggatttaaa ccttttattg caatatatag cacctttttg
    24181 cagcgtgctt atgatcaagt gatccatgat tgtgcgatta tgaatttaaa tgtggttttt
    24241 gctatggata gagcagggat agtaggcgaa gatggggaga cgcatcaagg tgtttttgat
    24301 cttagttttt tagctccttt gccaaatttc actcttttag ccccaagaga tgaacaaatg
    24361 atgcaaaata taatggagta tgcttattta catcaaggac ctattgcttt tcgttatcct
    24421 agagggagtt ttattttgga taaagaattt aatccttgtg agataaaact tggtaaggca
    24481 caatggcttg taaaaaataa tagtgaaatt gcttttttag gttatggaca aggtgtggca
    24541 aaagcgtggc aagtcttaag agccttgcaa gaaatgaata ataatgctaa tttgattgat
    24601 ttaatttttg ctaaaccttt agatgaagag cttttgtgtg agcttgctaa aaaaagtaaa
    24661 atttggttta tttttagtga aaatgttaaa attggcggta tagaaagttt aattaataat
    24721 tttttacaaa aatatgattt gcatgtaaaa gttgttagct ttgaatatga agacaaattt
    24781 attgaacatg gaaaaacaag tgaggtggaa aaaaatctag aaaaagatgt caatagtttg
    24841 ttgacgaaag ttttaaaatt ttatcattaa ataataaaaa atattattta atataaactt
    24901 cttttaataa a
//
LOCUS       DAPWGO010000165         6782 bp    DNA     linear   BCT 29-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate CI_2055
            SAMN06270883-rid18265863.guided.079, whole genome shotgun sequence.
ACCESSION   DAPWGO010000165 DAPWGO010000000
VERSION     DAPWGO010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270883
            Sequence Read Archive: SRR5209482
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768169.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768169.1
            Genome Coverage       :: 276x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:23:48
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,759
            CDSs (total)                      :: 1,724
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 19 of 26
            Pseudo Genes (incomplete)         :: 6 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6782
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270883-rid18265863.guided.079"
                     /isolate="CI_2055"
                     /isolation_source="Duck feces"
                     /db_xref="taxon:197"
                     /country="Canada: Coaldale, Alberta"
                     /lat_lon="49.7275 N 112.6179 W"
                     /collection_date="2006-07-11"
                     /collected_by="NML@Lethbridge"
     gene            complement(152..1306)
                     /locus_tag="RJ336_001753"
     CDS             complement(152..1306)
                     /locus_tag="RJ336_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate transporter"
                     /protein_id="HDZ5214180.1"
                     /translation="MKTLVTFIKDGVKSVTDTAALFVFSILFFSVLNASGFFTKILNA
                     FLSKMKANVYQVCILTVFITAAVHLDGSGASTFLIVIPALLPIYERLGIRKTSMLLII
                     TSAMGVMNVIPWGGPTLRAATNIGMDANLLWHHIIPIQIVGLVLSLLLAIWIAKIEIK
                     RGAGAGNLSGINLNIEKSEHHNEKWFWLNLLVAIGVIGLLISGIFPSYICFMIGLAII
                     LPLNYPNLKIAKKVLDRASAGAMLMYITLIGAGILIGVFDKSGIMEKMGVLILNFVPD
                     YLGAYIPLMVGILAVPMAIIFCTDSYFYGVMPIVLSVTKAFGAEPLTIAIIMVIARNC
                     ATFISPVVPATLLGCGLAEVNIKDHIKRSFFYIWGISIICLIFAEVAGII"
     gene            1269..1493
                     /locus_tag="RJ336_001754"
     CDS             1269..1493
                     /locus_tag="RJ336_001754"
                     /inference="COORDINATES: protein motif:HMM:NF015397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HDZ5214181.1"
                     /translation="MTPSLIKVTNVLISKTPPLTPEQAHKNAVELAEHTKAWKGHEVL
                     IATHIDKGHIHTHFIVNSVNYENGHKLQWM"
     gene            1545..1919
                     /locus_tag="RJ336_001755"
     CDS             1545..1919
                     /locus_tag="RJ336_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001129922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TnpV protein"
                     /protein_id="HDZ5214182.1"
                     /translation="MAKSLFEELGGKYERQGDYLIPCLTVPAEEEQAIGIWGQRHLDY
                     LKQYRKVTYTNLLTSGRLNAYLADINRQAQERFERLIEGMKQAQGITEQLKAENALEW
                     TGCLNNIRACAREIVEKEIIFA"
     gene            2286..4205
                     /gene="tet(O)"
                     /locus_tag="RJ336_001756"
     CDS             2286..4205
                     /gene="tet(O)"
                     /locus_tag="RJ336_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032490535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance ribosomal protection
                     protein Tet(O)"
                     /protein_id="HDZ5214183.1"
                     /translation="MKIINLGILAHVDAGKTTLTESLLYTSGAIAELGSVDEGTTRTD
                     TMNLERQRGITIQTAVTSFQWEDVKVNIIDTPGHMDFLAEVYRSLSVLDGAVLLVSAK
                     DGIQAQTRILFHALQIMKIPTIFFINKIDQEGIDLPMVYREMKAKLSSEIIVKQKVGQ
                     HPHINVTDNDDMEQWDAVIMGNDELLEKYMSGKPFKMSELEQEENRRFQNGTLFPVYH
                     GSAKNNLGTRQLIEVIASKFYSSTPEGQSELCGQVFKIEYSEKRRRFVYVRIYSGTLH
                     LRDVIRISEKEKIKITEMCVPTNGELYPSDTACSGDIVILPNDVLQLNSILGNEMLLP
                     QRKFIENPLPMLQTTIAVKKPEQREILLGALTEISDGDPLLKYYVDTTTHEIILSFLG
                     NVQMEVICAILEEKYHVEAEIKEPTVIYMERPLRKAEYTIHIEVPPNPFWASVGLSIE
                     PLPIGSGVQYESRVSLGYLNQSFQNAVMEGVLYGCEQGLYGWKVTDCKICFEYGLYYS
                     PVSTPADFRLLSPIVLEQALKKAGTELLEPYLHFEIYAPQEYLSRAYHDAPRYCADIV
                     STQIKNDEVILKGEIPARCIQEYRNDLTCFTNGQGVCLTELKGYQPAIGKFICQPRRP
                     NSRIDKVRHMFHKLA"
     gene            4257..4430
                     /locus_tag="RJ336_001757"
     CDS             4257..4430
                     /locus_tag="RJ336_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich KTR domain-containing protein"
                     /protein_id="HDZ5214184.1"
                     /translation="MMKCEWILCPVCGSKTRNKIRKDTVLENYPLYCPKCRQERLIKV
                     DNLKITVIKEPDA"
     gene            complement(4805..6097)
                     /locus_tag="RJ336_001758"
     CDS             complement(4805..6097)
                     /locus_tag="RJ336_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001274343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDZ5214185.1"
                     /translation="MSANNNELISISHKIELKPNNKAKTHFKKAFGCARLAYNWGLAK
                     WQEYYKQGIKKSHLELKKEFNVIKKEQFPFVYEVSKYATQQPFLNLNLAFQKFFRDLK
                     QGKVSYPKFKKKKDNFGSYYIGGDQAIIKDEKYLKVPNLGLVKMKEKLRFNGKINSFT
                     ISQSADKFFVSFSMQISKDEYLKTHNKAKNNNLALSIDVGLKSFLSLSNGLEIKAPKP
                     LAKFNRLMIKRARQLSKKQHAKTKQEALQGIKKSSNYLKASIKLNKLHRKIANIRSDF
                     LHKLTSSLVANAKYFCLEDLNVKGMMSNHRLAKSISDVSFYEFKRQLEYKSSYNDKEI
                     YQVDRFYPSSKLCSNCGTIKENLALKDRVYICDECGISIDRDYNASLNLLSQLKQKIG
                     KVLAEFTPADLTALLNDLAINQIATSKVETGIQQKSYL"
     gene            complement(6084..6722)
                     /locus_tag="RJ336_001759"
     CDS             complement(6084..6722)
                     /locus_tag="RJ336_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS607-like element ISChh1 family transposase"
                     /protein_id="HDZ5214186.1"
                     /translation="MNKLLSIGQASKALGVTIQTLRNWDKKGLLKPDDMTKGGERRYK
                     LETLKAINKNLVFNKDSLKTIAYARVSSHDQKDDLIRQVQVLELYCSKQGFNYEVIQD
                     LGSGMNYYKKGLTKLLNQILDGKVKRLVLTHKDRLLRFGAELVFAICEAKEVEVIIIN
                     KGEESVKFEEELAKDVLEIITVFSARLYGSRSKKNKKLLDEMQEVVVENVSK"
BASE COUNT         2299 a         1178 c         1206 g         2099 t
ORIGIN      
        1 aaaatattct tataagttta aatttataat ttttctctaa agtaaaataa aataatacaa
       61 aaaaacgctt atatttttat aaatttttga ctcaaaaata tcataaaaca atgaaccaat
      121 cattgaaaaa tcaaaagttc ttttatttta attatattat cccagctacc tcagcaaaaa
      181 tcaagcaaat aatacttata ccccatatat aaaaaaagct tcttttgata tgatctttaa
      241 tattaacctc tgctaaaccg caacctagca aagttgcagg cacaacagga gaaataaatg
      301 tcgcacaatt tcttgctatc accatgataa tagctatagt caaaggttca gcgccaaaag
      361 ccttagttac actcaaaact ataggcatca ctccataaaa ataagaatct gtacaaaaaa
      421 taattgccat tggaacagcc aatatcccta ccatcaaagg aatataagca cctaaataat
      481 ctggaacaaa atttaaaatc aaaacaccca ttttctccat aataccactt ttatcaaata
      541 cacctattaa tatcccagca ccaattaaag taatatacat aagcattgca ccagcacttg
      601 cacgatctaa aactttttta gctattttta aattaggata attaagcggt aaaattattg
      661 caagtcctat cataaagcaa atataactag gaaaaatacc actaattaaa agcccaataa
      721 ccccaatagc tacaagtaaa tttaaccaaa accatttttc attatggtgt tcgctttttt
      781 ctatatttaa atttattcca gacaagttac ctgcgcctgc acctcttttt atttctatct
      841 tagcaatcca aattgccaaa agaagggata ataccaaacc tacaatctga ataggtataa
      901 tatggtgcca aagcaaattt gcatccattc ctatgttagt agccgctctt aaagtaggac
      961 caccccaagg aataacattc ataaccccca tagccgaagt aataatcaat aacattgaag
     1021 tctttcttat acctagacgc tcataaatag gtaataatgc aggtattaca ataagaaaag
     1081 tagaagcacc tgaaccatct aaatgtacag cagcagtaat aaaaacagta agaatgcaaa
     1141 cttgatatac attagctttc atttttgata aaaacgcatt taaaatttta gtaaaaaaac
     1201 cacttgcatt taaaacacta aaaaagagta tagaaaaaac aaacaaagct gccgtatccg
     1261 ttacgctttt gactccatct ttaataaaag taaccaatgt tttaatatca aaaacacctc
     1321 ctttaacccc ggagcaggct cacaagaacg ctgtcgagct ggcagagcat acaaaggcat
     1381 ggaaagggca tgaagttctg atagccacgc atatagacaa ggggcatata cacacgcact
     1441 ttattgtcaa ttccgtaaat tatgagaacg gtcataagct ccaatggatg taggacggat
     1501 tttgcggaca ttcaaaataa aaaagaatgt ggaggtaaca gacaatggca aaatcattat
     1561 ttgaggaact gggcggcaaa tacgaaaggc aaggggatta tttgataccg tgcttaactg
     1621 tacccgccga agaagaacag gcaataggca tctgggggca acggcattta gattatctaa
     1681 aacagtaccg taaagttaca tacaccaatc ttcttacaag cggcaggcta aacgcctacc
     1741 ttgccgacat caacagacag gcacaggaac gctttgaaag gctcatagag ggtatgaaac
     1801 aggcacaggg cataacggaa cagctaaagg cagaaaacgc cttagaatgg acaggatgcc
     1861 tcaataacat aagggcttgt gcgagggaga ttgtggaaaa ggaaattatt tttgcataaa
     1921 cagatgatta gtggcagggg gaaatcctgc cgctttttct gctttagttt gtcagcttga
     1981 caaataaagg gttaaagaat ataattagat tcagtattat acaaggagtt aataaatatg
     2041 cggcaaggta ttcttaaata aactgtcaat ttgatagtgg gaacaaaaag tagcagtccc
     2101 gtttcacttt taatatgggg cttagttttt tgtacccagt ttaagaatac ttttatcatg
     2161 tgattttata tgcccgaaaa catataagtg ttttggggct attggagtta tttacccagt
     2221 gataggagta tttatcactg ggtattttta tgcccttttt tgggtgttga taggaggaaa
     2281 atcacatgaa aataattaac ttaggcattc tggctcacgt tgacgcagga aagacaacat
     2341 taacggaaag tttattgtat accagtggtg caattgcaga actagggagc gtagatgaag
     2401 gcacaacaag gacagataca atgaatttgg agcgtcaaag gggaatcact atccagacag
     2461 cagtgacatc ttttcagtgg gaggatgtaa aagtcaacat tatagatacg ccaggccata
     2521 tggatttttt ggcggaagta taccgttctt tatccgtatt agacggagca gtattattag
     2581 tttctgcaaa ggatggcata caggcacaga cccgtatact gtttcatgca ctacagataa
     2641 tgaagattcc gacaattttt ttcatcaata aaattgacca agaggggatt gatttgccaa
     2701 tggtatatcg ggaaatgaaa gcaaagcttt cttcggaaat tatagtgaag caaaaggttg
     2761 ggcagcatcc ccatataaat gtaacggaca atgacgatat ggaacagtgg gatgcggtaa
     2821 ttatgggaaa cgatgaacta ttagagaaat atatgtcagg gaaaccgttt aaaatgtcag
     2881 aactggaaca ggaagaaaac aggagattcc aaaacggaac gttatttccc gtttatcacg
     2941 gaagcgctaa aaacaatctg gggactcggc agcttataga agtaattgcc agtaaatttt
     3001 attcatcaac gcctgaaggt caatctgaac tatgcgggca ggtttttaag attgaatatt
     3061 cagagaaaag gcggcgtttt gtttatgtgc gtatatatag cggaacattg catttgaggg
     3121 atgttattag aatatctgaa aaagagaaaa taaaaatcac agagatgtgt gttccgacaa
     3181 acggtgaatt atatccatcc gatacagcct gctctggtga tattgtaatt ttaccaaatg
     3241 atgttttgca gctaaacagt attttgggga acgaaatgct gttgccgcag agaaaattta
     3301 ttgaaaatcc tctccctatg ctccaaacaa cgattgcagt aaagaaacct gaacagcggg
     3361 aaatattgct tggggcactt acagaaattt cagatggcga ccctctttta aaatattatg
     3421 tggatactac aacgcatgag attatacttt cttttttggg gaatgtgcag atggaagtca
     3481 tttgtgccat ccttgaggaa aaatatcatg tggaggcaga aataaaagag cctactgtta
     3541 tatatatgga aagaccgctt agaaaagcag aatataccat ccacatagaa gtcccgccaa
     3601 atcctttctg ggcttctgtc gggttgtcca tagagccgct ccctattgga agcggagtgc
     3661 agtatgaaag cagagtttca cttggatatt taaatcaatc gttccaaaat gcggttatgg
     3721 agggggttct ttatggctgc gagcaggggc tgtatggatg gaaagtgaca gactgtaaaa
     3781 tctgttttga atatggattg tattatagtc ctgtaagtac ccccgcagac tttcggctgc
     3841 tttcccctat cgtattggag caggctttaa aaaaagcagg gacagaacta ttagagccat
     3901 atctccactt tgaaatttat gcaccgcagg aatatctctc acgggcgtat catgatgctc
     3961 caaggtattg tgcagatatt gtaagtactc agataaagaa tgacgaggtc attctgaaag
     4021 gagaaatccc tgctagatgt attcaagaat acaggaacga tttaacttgt ttcacaaatg
     4081 ggcagggagt ctgcttgaca gagttaaaag gataccagcc agctattggt aaatttattt
     4141 gccaaccccg ccgcccgaat agccgtatag ataaggttcg gcatatgttc cacaagttag
     4201 cttaacagct tgcaaaagtc atataaaatg agatttgaaa ggattagaga ctaattatga
     4261 tgaaatgcga atggatattg tgtcctgttt gtgggagcaa aacccgtaat aaaattagga
     4321 aggacactgt tttggagaat tatccccttt attgtccaaa atgcagacaa gaaagattga
     4381 ttaaagttga caacttgaag ataactgtca tcaaagagcc agacgcttaa gacgcagagc
     4441 cgatgaaatt gtggaacaat tcacgaatca tcggctcttt ttgtttcgta tttgaaagaa
     4501 caaactcacc aaataaaaaa aacgatattc gggtgggtta ttttgttata ccctaaatta
     4561 ccctctgagt aagcacgacc ttaaagactt aaaggaacgg tgcaacgagc agagctggga
     4621 acagggcttg catgtgccgg agaaaggaaa gacatttgct ggagaagtcc gggaagaaac
     4681 ggtggcatgg agcaaagaca cctaccagct tttgaaacag gcagagcagg gaaaggtcaa
     4741 aagctatgtg caggatattg ccgttcctac aaacctataa aatcctataa aaagatataa
     4801 aactctataa ataggatttt tgttgtattc ctgtttcaac cttgctagtt gctatttgat
     4861 ttattgctaa atcatttaac agagctgtca agtccgcagg cgtaaattcg gcaagaactt
     4921 tgcctatttt ttgctttaat tgtgaaagca aattaagact agcattgtag tctctatcaa
     4981 tgctaattcc acattcatcg caaatataaa ctctatcttt tagagctaaa ttttctttta
     5041 tagttccaca attagagcat aatttagaac taggataaaa tctatctact tgatagattt
     5101 ctttatcgtt gtagctagat ttatattcta gttgcctttt aaactcataa aaacttacat
     5161 cgcttataga tttagcaagt ctatgattac tcatcatccc ttttacattt aaatcctcta
     5221 agcaaaaata tttagcattt gctaccaagc tagaagtaag cttgtgtaaa aaatcacttc
     5281 ttatatttgc tattttacga tgcaatttat ttagcttaat acttgctttt agataattgc
     5341 tagatttttt aatgccttgt aatgcttctt gcttggtttt tgcgtgttgc tttttgctta
     5401 gctgtctagc tctttttatc attaaacgat taaacttagc taatggttta ggtgctttta
     5461 tctctaagcc attagataaa cttaaaaacg attttaagcc tacatctatg ctaagtgcta
     5521 gattattatt tttagcttta ttatgagttt ttagatactc atctttacta atttgcatac
     5581 taaaagaaac aaagaattta tcagcacttt gagaaatagt aaaagaattg attttaccat
     5641 taaatctcaa tttctctttc atttttacaa gtcctaaatt tggcactttt agatattttt
     5701 catctttgat tattgcttgg tctccaccta tgtaataaga gccgaaatta tctttctttt
     5761 tcttaaattt tggatagctt actttacctt gttttaaatc tctaaaaaat ttttgaaatg
     5821 ctagatttag atttaaaaaa ggctgttgcg tagcatattt acttacttca taaacgaaag
     5881 gaaattgttc tttttttata acattaaact cttttttaag ctctaaatga gattttttaa
     5941 tgccttgctt atagtattct tgccatttag caagtcccca attataagca agtctagcac
     6001 aaccaaaggc ttttttaaaa tgagttttag ctttattatt tggctttaac tctatcttat
     6061 gagaaatgct aataagctca ttattatttg ctgacatttt ctaccaccac ttcttgcatt
     6121 tcatctaaaa gttttttatt tttctttgag cgtgagccat aaagtctagc tgaaaatact
     6181 gtgattattt ccaacacatc tttggctaat tcttcttcaa attttacgct ttcttcgcct
     6241 ttatttatta ttattacttc tacttctttg gcttcacata tagcaaatac tagctcagca
     6301 ccaaagcgta aaagtctgtc tttgtgagtt aaaactaatc tttttacttt gccatctaga
     6361 atttgattta gcaatttagt taagcctttt ttataataat tcataccaga gcctaaatct
     6421 tgtataactt cataattaaa gccttgttta gaacaatata gctctaagac ttgaacttgc
     6481 cttattaaat catctttttg gtcgtggcta gaaacacgag cataagcaat agtttttaag
     6541 ctatctttat taaaaactag gtttttattt atagctttta atgtttctag cttataccta
     6601 cgctctccac ccttagtcat atcatcaggt tttaataagc cttttttatc ccaatttcta
     6661 agagtttgga tagtaacacc aagagcttta ctagcttgac cgattgataa taatttattc
     6721 ataggactat tttagcaaat tttaaaaaat aagtcaagta aaatctataa aatatttata
     6781 ta
//
